RJP_RS00015 IPR005177 Bifunctional kinase-pyrophosphorylase RJP_RS00015 IPR026565 Putative pyruvate, phosphate dikinase regulatory protein RJP_RS00020 IPR005746 Thioredoxin RJP_RS00020 IPR012336 Thioredoxin-like fold RJP_RS00020 IPR013766 Thioredoxin domain RJP_RS00020 IPR017937 Thioredoxin, conserved site RJP_RS00025 IPR003439 ABC transporter-like RJP_RS00025 IPR003593 AAA+ ATPase domain RJP_RS00025 IPR017871 ABC transporter, conserved site RJP_RS00025 IPR027417 P-loop containing nucleoside triphosphate hydrolase RJP_RS00030 IPR000412 ABC-2 transporter RJP_RS00030 IPR013525 ABC-2 type transporter RJP_RS00035 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II RJP_RS00035 IPR016040 NAD(P)-binding domain RJP_RS00035 IPR017938 Riboflavin synthase-like beta-barrel RJP_RS00035 IPR023753 Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain RJP_RS00040 IPR003477 mRNA interferase PemK-like protein RJP_RS00040 IPR011067 Plasmid maintenance toxin/Cell growth inhibitor RJP_RS00045 IPR001451 Bacterial transferase hexapeptide repeat RJP_RS00045 IPR010137 Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase RJP_RS00045 IPR011004 Trimeric LpxA-like RJP_RS00045 IPR018357 Hexapeptide transferase, conserved site RJP_RS00045 IPR029098 Udp N-acetylglucosamine O-acyltransferase, C-terminal RJP_RS00050 IPR010084 Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ RJP_RS00050 IPR013114 Beta-hydroxydecanoyl thiol ester dehydrase, FabA/FabZ RJP_RS00050 IPR029069 HotDog domain RJP_RS00055 IPR001451 Bacterial transferase hexapeptide repeat RJP_RS00055 IPR007691 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase RJP_RS00055 IPR011004 Trimeric LpxA-like RJP_RS00055 IPR018357 Hexapeptide transferase, conserved site RJP_RS00055 IPR020573 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, non-repeat region RJP_RS00080 IPR020683 Ankyrin repeat-containing domain RJP_RS00090 IPR001269 tRNA-dihydrouridine synthase RJP_RS00090 IPR004652 tRNA-dihydrouridine synthase, TIM-barrel, NifR3 RJP_RS00090 IPR013785 Aldolase-type TIM barrel RJP_RS00090 IPR018517 tRNA-dihydrouridine synthase, conserved site RJP_RS00090 IPR024036 tRNA-dihydrouridine synthase, putative, C-terminal RJP_RS00100 IPR003442 tRNA threonylcarbamoyl adenosine modification protein TsaE RJP_RS00100 IPR027417 P-loop containing nucleoside triphosphate hydrolase RJP_RS00105 IPR006127 Periplasmic solute binding protein family RJP_RS00110 IPR002646 Poly A polymerase, head domain RJP_RS00110 IPR005728 Rickettsial palindromic element RJP_RS00110 IPR032828 RJP_RS00110 RJP_RS00130 IPR005546 Autotransporter beta-domain RJP_RS00130 IPR020179 Antigen surface cell precursor, Sca1 RJP_RS00155 IPR003593 AAA+ ATPase domain RJP_RS00155 IPR027417 P-loop containing nucleoside triphosphate hydrolase RJP_RS00170 IPR002146 ATPase, F0 complex, subunit B/B', bacterial/chloroplast RJP_RS00175 IPR003319 ATP synthase YMF19-like, N-terminal RJP_RS00180 IPR000454 ATPase, F0 complex, subunit C RJP_RS00180 IPR002379 V-ATPase proteolipid subunit C-like domain RJP_RS00180 IPR020537 ATPase, F0 complex, subunit C, DCCD-binding site RJP_RS00185 IPR000568 ATPase, F0 complex, subunit A RJP_RS00185 IPR023011 ATPase, F0 complex, subunit A, active site RJP_RS00190 IPR032820 RJP_RS00190 RJP_RS00195 IPR012336 Thioredoxin-like fold RJP_RS00195 IPR017937 Thioredoxin, conserved site RJP_RS00200 IPR003711 CarD-like/TRCF domain RJP_RS00205 IPR018773 Methyltransferase regulatory domain, predicted RJP_RS00205 IPR025714 Methyltransferase domain RJP_RS00205 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like RJP_RS00210 IPR001238 DNA-binding, RecF RJP_RS00210 IPR003395 RecF/RecN/SMC, N-terminal RJP_RS00210 IPR018078 DNA-binding, RecF, conserved site RJP_RS00210 IPR027417 P-loop containing nucleoside triphosphate hydrolase RJP_RS00215 IPR016084 Haem oxygenase-like, multi-helical RJP_RS00215 IPR028201 PqqC-like protein RJP_RS00220 IPR016084 Haem oxygenase-like, multi-helical RJP_RS00225 IPR001796 Dihydrofolate reductase domain RJP_RS00225 IPR012259 Dihydrofolate reductase RJP_RS00225 IPR024072 Dihydrofolate reductase-like domain RJP_RS00230 IPR011005 Dihydropteroate synthase-like RJP_RS00235 IPR000489 Pterin-binding RJP_RS00235 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK RJP_RS00235 IPR011005 Dihydropteroate synthase-like RJP_RS00240 IPR020171 Uncharacterised protein family RC0039 RJP_RS00245 IPR011990 Tetratricopeptide-like helical domain RJP_RS00265 IPR003782 Copper chaperone SCO1/SenC RJP_RS00265 IPR012336 Thioredoxin-like fold RJP_RS00270 IPR003774 Protein of unknown function UPF0301 RJP_RS00275 IPR003825 Colicin V production, CvpA RJP_RS00295 IPR005546 Autotransporter beta-domain RJP_RS00300 IPR020183 Uncharacterised protein family RC0048 RJP_RS00320 IPR002347 Glucose/ribitol dehydrogenase RJP_RS00320 IPR016040 NAD(P)-binding domain RJP_RS00345 IPR001270 ClpA/B family RJP_RS00345 IPR003593 AAA+ ATPase domain RJP_RS00345 IPR003959 ATPase, AAA-type, core RJP_RS00345 IPR004176 Clp, N-terminal RJP_RS00345 IPR017730 Chaperonin ClpB RJP_RS00345 IPR018368 ClpA/B, conserved site 1 RJP_RS00345 IPR019489 Clp ATPase, C-terminal RJP_RS00345 IPR027417 P-loop containing nucleoside triphosphate hydrolase RJP_RS00345 IPR028299 ClpA/B, conserved site 2 RJP_RS00355 IPR000905 Gcp-like domain RJP_RS00355 IPR017860 Peptidase M22, conserved site RJP_RS00355 IPR017861 Kae1/YgjD family RJP_RS00355 IPR022450 tRNA N6-adenosine threonylcarbamoyltransferase, TsaD RJP_RS00360 IPR005804 Fatty acid desaturase, type 1 RJP_RS00360 IPR015876 Fatty acid desaturase, type 1, core RJP_RS00365 IPR001867 Signal transduction response regulator, C-terminal RJP_RS00365 IPR011991 Winged helix-turn-helix DNA-binding domain RJP_RS00365 IPR016032 Signal transduction response regulator, C-terminal effector RJP_RS00370 IPR000529 Ribosomal protein S6 RJP_RS00370 IPR014717 Translation elongation factor EF1B/ribosomal protein S6 RJP_RS00370 IPR020814 Ribosomal protein S6, plastid/chloroplast RJP_RS00375 IPR001648 Ribosomal protein S18 RJP_RS00375 IPR018275 Ribosomal protein S18, conserved site RJP_RS00380 IPR000244 Ribosomal protein L9 RJP_RS00380 IPR009027 Ribosomal protein L9/RNase H1, N-terminal RJP_RS00380 IPR020069 Ribosomal protein L9, C-terminal RJP_RS00380 IPR020070 Ribosomal protein L9, N-terminal RJP_RS00380 IPR020594 Ribosomal protein L9, bacteria/chloroplast RJP_RS00385 IPR005728 Rickettsial palindromic element RJP_RS00385 IPR011063 tRNA(Ile)-lysidine/2-thiocytidine synthase RJP_RS00385 IPR012094 Lysidine-tRNA(Ile) synthetase RJP_RS00385 IPR012795 Lysidine-tRNA(Ile) synthetase, N-terminal RJP_RS00385 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold RJP_RS00390 IPR000642 Peptidase M41 RJP_RS00390 IPR003593 AAA+ ATPase domain RJP_RS00390 IPR003959 ATPase, AAA-type, core RJP_RS00390 IPR003960 ATPase, AAA-type, conserved site RJP_RS00390 IPR005936 Peptidase, FtsH RJP_RS00390 IPR011546 Peptidase M41, FtsH extracellular RJP_RS00390 IPR027417 P-loop containing nucleoside triphosphate hydrolase RJP_RS00395 IPR018117 DNA methylase, C-5 cytosine-specific, active site RJP_RS00395 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like RJP_RS00410 IPR001041 2Fe-2S ferredoxin-type domain RJP_RS00410 IPR004489 Succinate dehydrogenase/fumarate reductase iron-sulphur protein RJP_RS00410 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site RJP_RS00410 IPR009051 Alpha-helical ferredoxin RJP_RS00410 IPR012675 Beta-grasp domain RJP_RS00410 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site RJP_RS00410 IPR025192 Succinate dehydogenase/fumarate reductase N-terminal RJP_RS00420 IPR003788 Putative S-adenosyl-L-methionine-dependent methyltransferase MidA RJP_RS00420 IPR005728 Rickettsial palindromic element RJP_RS00420 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like RJP_RS00425 IPR001640 Prolipoprotein diacylglyceryl transferase RJP_RS00430 IPR006685 Mechanosensitive ion channel MscS RJP_RS00430 IPR010920 Like-Sm (LSM) domain RJP_RS00430 IPR030192 RJP_RS00430 RJP_RS00435 IPR001708 Membrane insertase OXA1/ALB3/YidC RJP_RS00435 IPR019998 Membrane insertase YidC RJP_RS00435 IPR028053 Membrane insertase YidC, N-terminal RJP_RS00435 IPR028055 Membrane insertase YidC/Oxa1, C-terminal RJP_RS00440 IPR000462 CDP-alcohol phosphatidyltransferase RJP_RS00440 IPR004570 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase RJP_RS00445 IPR001765 Carbonic anhydrase RJP_RS00455 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like RJP_RS00470 IPR018711 Domain of unknown function DUF2233 RJP_RS00475 IPR000181 Formylmethionine deformylase RJP_RS00475 IPR023635 Peptide deformylase RJP_RS00480 IPR004667 ADP/ATP carrier protein RJP_RS00480 IPR020846 Major facilitator superfamily domain RJP_RS00485 IPR000849 Sugar phosphate transporter RJP_RS00485 IPR011701 Major facilitator superfamily RJP_RS00485 IPR020846 Major facilitator superfamily domain RJP_RS00490 IPR001564 Nucleoside diphosphate kinase RJP_RS00490 IPR023005 Nucleoside diphosphate kinase, active site RJP_RS00495 IPR002218 Glucose-inhibited division protein A-related RJP_RS00495 IPR004416 Glucose-inhibited division protein A RJP_RS00495 IPR020595 Glucose-inhibited division protein A-related, conserved site RJP_RS00495 IPR023753 Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain RJP_RS00495 IPR026904 GidA associated domain 3 RJP_RS00500 IPR003682 rRNA small subunit methyltransferase G RJP_RS00500 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like RJP_RS00505 IPR025669 AAA domain RJP_RS00505 IPR027417 P-loop containing nucleoside triphosphate hydrolase RJP_RS00510 IPR003115 ParB/Sulfiredoxin RJP_RS00510 IPR004437 ParB/RepB/Spo0J partition protein family RJP_RS00515 IPR003439 ABC transporter-like RJP_RS00515 IPR003593 AAA+ ATPase domain RJP_RS00515 IPR017871 ABC transporter, conserved site RJP_RS00515 IPR022374 ABC transporter, ATP-binding protein, ChvD RJP_RS00515 IPR027417 P-loop containing nucleoside triphosphate hydrolase RJP_RS00515 IPR032781 RJP_RS00515 RJP_RS00520 IPR022718 Protein of unknown function DUF2672 RJP_RS00525 IPR006218 DAHP synthetase I/KDSA RJP_RS00525 IPR006269 3-deoxy-8-phosphooctulonate synthase RJP_RS00525 IPR013785 Aldolase-type TIM barrel RJP_RS00545 IPR000361 FeS cluster biogenesis RJP_RS00545 IPR016092 FeS cluster insertion protein RJP_RS00545 IPR017870 FeS cluster insertion, C-terminal, conserved site RJP_RS00550 IPR003607 HD/PDEase domain RJP_RS00550 IPR006261 Deoxyguanosinetriphosphate triphosphohydrolase RJP_RS00550 IPR006674 HD domain RJP_RS00550 IPR023023 Deoxyguanosinetriphosphate triphosphohydrolase, type 2 RJP_RS00550 IPR026875 Phosphohydrolase-associated domain RJP_RS00555 IPR001278 Arginine-tRNA ligase RJP_RS00555 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site RJP_RS00555 IPR005148 Arginyl tRNA synthetase N-terminal domain RJP_RS00555 IPR008909 DALR anticodon binding RJP_RS00555 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding RJP_RS00555 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold RJP_RS00560 IPR007730 Sporulation-related domain RJP_RS00565 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal RJP_RS00565 IPR005742 DNA topoisomerase IV, subunit A, Gram-negative RJP_RS00565 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal beta-pinwheel RJP_RS00565 IPR013758 DNA topoisomerase, type IIA, subunit A/ C-terminal, alpha-beta RJP_RS00565 IPR013760 DNA topoisomerase, type IIA-like domain RJP_RS00565 IPR024946 Arginine repressor C-terminal-like domain RJP_RS00575 IPR023614 Porin domain RJP_RS00580 IPR008180 Deoxyuridine triphosphate nucleotidohydrolase/Deoxycytidine triphosphate deaminase RJP_RS00580 IPR011962 Deoxycytidine triphosphate deaminase RJP_RS00580 IPR029054 dUTPase-like RJP_RS00585 IPR003708 Bacterial protein export chaperone SecB RJP_RS00590 IPR001789 Signal transduction response regulator, receiver domain RJP_RS00590 IPR001867 Signal transduction response regulator, C-terminal RJP_RS00590 IPR011006 CheY-like superfamily RJP_RS00590 IPR011991 Winged helix-turn-helix DNA-binding domain RJP_RS00595 IPR016428 NADPH-dependent 7-cyano-7-deazaguanine reductase, QueF type 2 RJP_RS00595 IPR029139 NADPH-dependent 7-cyano-7-deazaguanine reductase, N-terminal RJP_RS00595 IPR029500 NADPH-dependent 7-cyano-7-deazaguanine reductase QueF RJP_RS00600 IPR010421 Protein of unknown function DUF1013 RJP_RS00605 IPR012136 NADP transhydrogenase, beta subunit RJP_RS00605 IPR029035 DHS-like NAD/FAD-binding domain RJP_RS00610 IPR005618 Outer membrane protein, OmpW RJP_RS00610 IPR011250 Outer membrane protein/outer membrane enzyme PagP , beta-barrel RJP_RS00615 IPR000620 Drug/metabolite transporter RJP_RS00620 IPR005828 General substrate transporter RJP_RS00620 IPR011701 Major facilitator superfamily RJP_RS00620 IPR020846 Major facilitator superfamily domain RJP_RS00630 IPR004692 Preprotein translocase SecG subunit RJP_RS00640 IPR005546 Autotransporter beta-domain RJP_RS00645 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding RJP_RS00645 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold RJP_RS00645 IPR015273 Cysteinyl-tRNA synthetase, class Ia, DALR RJP_RS00645 IPR015803 Cysteine-tRNA ligase RJP_RS00645 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase RJP_RS00645 IPR032678 RJP_RS00645 RJP_RS00650 IPR001865 Ribosomal protein S2 RJP_RS00650 IPR005706 Ribosomal protein S2, bacteria/mitochondria/plastid RJP_RS00650 IPR018130 Ribosomal protein S2, conserved site RJP_RS00650 IPR023591 Ribosomal protein S2, flavodoxin-like domain RJP_RS00655 IPR001816 Translation elongation factor EFTs/EF1B RJP_RS00655 IPR009060 UBA-like RJP_RS00655 IPR014039 Translation elongation factor EFTs/EF1B, dimerisation RJP_RS00655 IPR018101 Translation elongation factor Ts, conserved site RJP_RS00665 IPR005728 Rickettsial palindromic element RJP_RS00665 IPR007507 3-deoxy-D-manno-octulosonic-acid transferase, N-terminal RJP_RS00670 IPR007172 Domain of unknown function DUF374 RJP_RS00675 IPR004838 Aminotransferases, class-I, pyridoxal-phosphate-binding site RJP_RS00675 IPR004839 Aminotransferase, class I/classII RJP_RS00675 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 RJP_RS00675 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 RJP_RS00675 IPR015424 Pyridoxal phosphate-dependent transferase RJP_RS00680 IPR009614 Toxin YoeB RJP_RS00685 IPR006442 Type II toxin-antitoxin system, antitoxin Phd/YefM RJP_RS00690 IPR011990 Tetratricopeptide-like helical domain RJP_RS00690 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like RJP_RS00695 IPR007428 VacJ-like lipoprotein RJP_RS00700 IPR008869 Toluene tolerance Ttg2/phospholipid-binding protein MlaC RJP_RS00700 IPR023094 Toluene tolerance protein, alpha-helical RJP_RS00700 IPR032710 RJP_RS00700 RJP_RS00720 IPR000821 Alanine racemase RJP_RS00720 IPR001608 Alanine racemase, N-terminal RJP_RS00720 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal RJP_RS00720 IPR011079 Alanine racemase, C-terminal RJP_RS00720 IPR020622 Alanine racemase, pyridoxal-phosphate attachment site RJP_RS00720 IPR029066 PLP-binding barrel RJP_RS00725 IPR003453 Permease domain RJP_RS00725 IPR030802 RJP_RS00725 RJP_RS00730 IPR003439 ABC transporter-like RJP_RS00730 IPR003593 AAA+ ATPase domain RJP_RS00730 IPR017871 ABC transporter, conserved site RJP_RS00730 IPR027417 P-loop containing nucleoside triphosphate hydrolase RJP_RS00745 IPR011324 Cytotoxic necrotizing factor-like, catalytic RJP_RS00750 IPR001383 Ribosomal protein L28 RJP_RS00750 IPR026569 Ribosomal protein L28/L24 RJP_RS00755 IPR002150 Ribosomal protein L31 RJP_RS00765 IPR006073 GTP binding domain RJP_RS00765 IPR019987 GTP-binding protein, ribosome biogenesis, YsxC RJP_RS00765 IPR027417 P-loop containing nucleoside triphosphate hydrolase RJP_RS00770 IPR001048 Aspartate/glutamate/uridylate kinase RJP_RS00770 IPR004662 Acetylglutamate kinase RJP_RS00775 IPR007792 Type IV secretion system, VirB3 / TrbD / AvhB RJP_RS00780 IPR003593 AAA+ ATPase domain RJP_RS00780 IPR004346 CagE, TrbE, VirB component of type IV transporter system RJP_RS00780 IPR018145 CagE, TrbE, VirB component of type IV transporter system, central domain RJP_RS00780 IPR027417 P-loop containing nucleoside triphosphate hydrolase RJP_RS00785 IPR007688 Conjugal transfer, TrbL/VirB6 RJP_RS00790 IPR007688 Conjugal transfer, TrbL/VirB6 RJP_RS00795 IPR007688 Conjugal transfer, TrbL/VirB6 RJP_RS00800 IPR007688 Conjugal transfer, TrbL/VirB6 RJP_RS00805 IPR007688 Conjugal transfer, TrbL/VirB6 RJP_RS00810 IPR002505 Phosphate acetyl/butaryl transferase RJP_RS00810 IPR012147 Phosphate acetyl/butyryltransferase RJP_RS00830 IPR002649 tRNA (guanine-N1-)-methyltransferase, bacteria RJP_RS00830 IPR016009 tRNA methyltransferase TRMD/TRM10-type domain RJP_RS00830 IPR023148 tRNA (guanine-N1-)-methyltransferase, C-terminal RJP_RS00830 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal RJP_RS00830 IPR029028 Alpha/beta knot methyltransferases RJP_RS00835 IPR001857 Ribosomal protein L19 RJP_RS00835 IPR008991 Translation protein SH3-like domain RJP_RS00835 IPR018257 Ribosomal protein L19, conserved site RJP_RS00840 IPR018753 Azospirillum phage Cd, Gp10 RJP_RS00845 IPR005665 Protein-export membrane protein SecF, bacterial RJP_RS00845 IPR022645 Protein-export membrane protein SecD/SecF, bacterial RJP_RS00845 IPR022646 Protein-export membrane protein SecD/SecF/SecDF, conserved site RJP_RS00845 IPR022813 Protein-export membrane protein SecD/SecF, archaeal and bacterial RJP_RS00850 IPR001949 NADH:ubiquinone oxidoreductase, 51kDa subunit, conserved site RJP_RS00850 IPR011537 NADH ubiquinone oxidoreductase, F subunit RJP_RS00850 IPR011538 NADH:ubiquinone oxidoreductase, 51kDa subunit RJP_RS00850 IPR019554 Soluble ligand binding domain RJP_RS00850 IPR019575 NADH ubiquinone oxidoreductase, F subunit, iron sulphur binding RJP_RS00855 IPR000223 Peptidase S26A, signal peptidase I RJP_RS00855 IPR015927 Peptidase S24/S26A/S26B/S26C RJP_RS00855 IPR019757 Peptidase S26A, signal peptidase I, lysine active site RJP_RS00855 IPR019758 Peptidase S26A, signal peptidase I, conserved site RJP_RS00855 IPR019759 Peptidase S24/S26A/S26B RJP_RS00855 IPR028360 Peptidase S24/S26, beta-ribbon domain RJP_RS00860 IPR000999 Ribonuclease III domain RJP_RS00860 IPR011907 Ribonuclease III RJP_RS00860 IPR014720 Double-stranded RNA-binding domain RJP_RS00865 IPR004044 K Homology domain, type 2 RJP_RS00865 IPR005225 Small GTP-binding protein domain RJP_RS00865 IPR005662 GTP-binding protein Era RJP_RS00865 IPR005728 Rickettsial palindromic element RJP_RS00865 IPR006073 GTP binding domain RJP_RS00865 IPR009019 K homology domain, prokaryotic type RJP_RS00865 IPR015946 K homology domain-like, alpha/beta RJP_RS00865 IPR027417 P-loop containing nucleoside triphosphate hydrolase RJP_RS00870 IPR002176 Crossover junction endodeoxyribonuclease RuvC RJP_RS00870 IPR012337 Ribonuclease H-like domain RJP_RS00870 IPR020563 Crossover junction endodeoxyribonuclease RuvC, magnesium-binding site RJP_RS00875 IPR001537 tRNA/rRNA methyltransferase, SpoU type RJP_RS00875 IPR004384 RNA methyltransferase TrmH, group 1 RJP_RS00875 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal RJP_RS00875 IPR029028 Alpha/beta knot methyltransferases RJP_RS00880 IPR010235 Nucleotidyltransferase substrate binding protein, HI0074 RJP_RS00885 IPR002934 Nucleotidyl transferase domain RJP_RS00890 IPR009367 Mitochondrial fission protein ELM1-like RJP_RS00895 IPR000808 Mrp, conserved site RJP_RS00895 IPR019591 Mrp/NBP35 ATP-binding protein RJP_RS00895 IPR027417 P-loop containing nucleoside triphosphate hydrolase RJP_RS00900 IPR001107 Band 7 protein RJP_RS00900 IPR001972 Stomatin family RJP_RS00900 IPR010201 HflK RJP_RS00905 IPR001107 Band 7 protein RJP_RS00905 IPR001972 Stomatin family RJP_RS00905 IPR010200 HflC RJP_RS00910 IPR001478 PDZ domain RJP_RS00910 IPR001940 Peptidase S1C RJP_RS00910 IPR009003 Trypsin-like cysteine/serine peptidase domain RJP_RS00910 IPR011782 Peptidase S1C, Do RJP_RS00915 IPR001763 Rhodanese-like domain RJP_RS00915 IPR020936 Uncharacterised protein family UPF0176 RJP_RS00920 IPR000701 Succinate dehydrogenase/Fumarate reductase, transmembrane subunit RJP_RS00920 IPR014314 Succinate dehydrogenase, cytochrome b556 subunit RJP_RS00920 IPR018495 Succinate dehydrogenase, cytochrome b subunit, conserved site RJP_RS00925 IPR000701 Succinate dehydrogenase/Fumarate reductase, transmembrane subunit RJP_RS00925 IPR014312 Succinate dehydrogenase, hydrophobic membrane anchor RJP_RS00930 IPR003952 Fumarate reductase/succinate dehydrogenase, FAD-binding site RJP_RS00930 IPR003953 FAD binding domain RJP_RS00930 IPR011281 Succinate dehydrogenase, flavoprotein subunit RJP_RS00930 IPR014006 Succinate dehydrogenase/fumarate reductase, flavoprotein subunit RJP_RS00930 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal RJP_RS00930 IPR023753 Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain RJP_RS00930 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain RJP_RS00930 IPR030664 RJP_RS00930 RJP_RS00935 IPR000515 MetI-like domain RJP_RS00935 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain, His/Glu/Gln/Arg/opine family RJP_RS00945 IPR000235 Ribosomal protein S5/S7 RJP_RS00945 IPR005717 Ribosomal protein S7, bacterial/organellar-type RJP_RS00945 IPR020606 Ribosomal protein S7, conserved site RJP_RS00945 IPR023798 Ribosomal protein S7 domain RJP_RS00950 IPR000640 Translation elongation factor EFG, V domain RJP_RS00950 IPR000795 Elongation factor, GTP-binding domain RJP_RS00950 IPR004161 Translation elongation factor EFTu/EF1A, domain 2 RJP_RS00950 IPR004540 Translation elongation factor EFG/EF2 RJP_RS00950 IPR005225 Small GTP-binding protein domain RJP_RS00950 IPR005517 Translation elongation factor EFG/EF2, domain IV RJP_RS00950 IPR009000 Translation protein, beta-barrel domain RJP_RS00950 IPR009022 Elongation factor G, III-V domain RJP_RS00950 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup RJP_RS00950 IPR020568 Ribosomal protein S5 domain 2-type fold RJP_RS00950 IPR027417 P-loop containing nucleoside triphosphate hydrolase RJP_RS00950 IPR031157 RJP_RS00950 RJP_RS00960 IPR001901 Protein translocase complex, SecE/Sec61-gamma subunit RJP_RS00960 IPR005807 SecE subunit of protein translocation complex RJP_RS00960 IPR022943 Preprotein translocase subunit SecE RJP_RS00965 IPR001062 Transcription antitermination protein, NusG RJP_RS00965 IPR005824 KOW RJP_RS00965 IPR006645 NusG, N-terminal RJP_RS00965 IPR008991 Translation protein SH3-like domain RJP_RS00965 IPR014722 Ribosomal protein L2 domain 2 RJP_RS00965 IPR015869 Transcription antitermination protein, NusG, bacteria, conserved site RJP_RS00970 IPR000911 Ribosomal protein L11/L12 RJP_RS00970 IPR006519 Ribosomal protein L11, bacterial-type RJP_RS00970 IPR020783 Ribosomal protein L11, C-terminal RJP_RS00970 IPR020784 Ribosomal protein L11, N-terminal RJP_RS00970 IPR020785 Ribosomal protein L11, conserved site RJP_RS00975 IPR002143 Ribosomal protein L1 RJP_RS00975 IPR005878 Ribosomal protein L1, bacterial-type RJP_RS00975 IPR016094 Ribosomal protein L1, 2-layer alpha/beta-sandwich RJP_RS00975 IPR016095 Ribosomal protein L1, 3-layer alpha/beta-sandwich RJP_RS00975 IPR023673 Ribosomal protein L1, conserved site RJP_RS00975 IPR023674 Ribosomal protein L1-like RJP_RS00975 IPR028364 Ribosomal protein L1/ribosomal biogenesis protein RJP_RS00980 IPR001790 Ribosomal protein L10/acidic P0 RJP_RS00980 IPR002363 Ribosomal protein L10, eubacterial, conserved site RJP_RS00980 IPR022973 Ribosomal protein L10 RJP_RS00985 IPR000206 Ribosomal protein L7/L12 RJP_RS00985 IPR008932 Ribosomal protein L7/L12, oligomerisation RJP_RS00985 IPR013823 Ribosomal protein L7/L12, C-terminal RJP_RS00985 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like RJP_RS00990 IPR007120 DNA-directed RNA polymerase, subunit 2, domain 6 RJP_RS00990 IPR007121 RNA polymerase, beta subunit, conserved site RJP_RS00990 IPR007641 RNA polymerase Rpb2, domain 7 RJP_RS00990 IPR007642 RNA polymerase Rpb2, domain 2 RJP_RS00990 IPR007644 RNA polymerase, beta subunit, protrusion RJP_RS00990 IPR007645 RNA polymerase Rpb2, domain 3 RJP_RS00990 IPR010243 DNA-directed RNA polymerase, beta subunit RJP_RS00990 IPR014724 RNA polymerase Rpb2, OB-fold RJP_RS00990 IPR015712 DNA-directed RNA polymerase, subunit 2 RJP_RS00990 IPR019462 DNA-directed RNA polymerase, beta subunit, external 1 domain RJP_RS00995 IPR000722 RNA polymerase, alpha subunit RJP_RS00995 IPR006592 RNA polymerase, N-terminal RJP_RS00995 IPR007066 RNA polymerase Rpb1, domain 3 RJP_RS00995 IPR007080 RNA polymerase Rpb1, domain 1 RJP_RS00995 IPR007081 RNA polymerase Rpb1, domain 5 RJP_RS00995 IPR007083 RNA polymerase Rpb1, domain 4 RJP_RS00995 IPR012754 DNA-directed RNA polymerase, subunit beta-prime RJP_RS01000 IPR005728 Rickettsial palindromic element RJP_RS01005 IPR000819 Peptidase M17, leucyl aminopeptidase, C-terminal RJP_RS01005 IPR008283 Peptidase M17, leucyl aminopeptidase, N-terminal RJP_RS01005 IPR011356 Leucine aminopeptidase/peptidase B RJP_RS01005 IPR023042 Peptidase M17, leucine aminopeptidase RJP_RS01010 IPR015223 ATPase MipZ/NubP2/Cfd1 RJP_RS01010 IPR027417 P-loop containing nucleoside triphosphate hydrolase RJP_RS01015 IPR021455 Protein of unknown function DUF3106 RJP_RS01020 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb RJP_RS01020 IPR004115 GAD-like domain RJP_RS01020 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) RJP_RS01020 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type RJP_RS01020 IPR004524 Aspartate-tRNA ligase, class IIb, bacterial/mitochondrial-type RJP_RS01020 IPR012340 Nucleic acid-binding, OB-fold RJP_RS01020 IPR018150 Aminoacyl-tRNA synthetase, class II (D/K/N)-like RJP_RS01020 IPR029351 GAD domain RJP_RS01030 IPR006214 Bax inhibitor 1-related RJP_RS01035 IPR000846 Dihydrodipicolinate reductase, N-terminal RJP_RS01035 IPR016040 NAD(P)-binding domain RJP_RS01035 IPR022663 Dihydrodipicolinate reductase, C-terminal RJP_RS01035 IPR022664 Dihydrodipicolinate reductase, conserved site RJP_RS01035 IPR023940 Dihydrodipicolinate reductase, bacterial RJP_RS01040 IPR002563 Flavin reductase-like, FMN-binding RJP_RS01040 IPR012349 FMN-binding split barrel RJP_RS01045 IPR001320 Ionotropic glutamate receptor RJP_RS01045 IPR001638 Extracellular solute-binding protein, family 3 RJP_RS01050 IPR003789 Aspartyl/glutamyl-tRNA amidotransferase subunit B-related RJP_RS01050 IPR004413 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, B subunit RJP_RS01050 IPR006075 Aspartyl/Glutamyl-tRNA(Gln) amidotransferase, subunit B/E, catalytic RJP_RS01050 IPR017958 Glutamyl-tRNA(Gln) amidotransferase, subunit B, conserved site RJP_RS01050 IPR017959 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, subunit B /E RJP_RS01050 IPR018027 Asn/Gln amidotransferase RJP_RS01050 IPR023168 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B, C-terminal RJP_RS01055 IPR000120 Amidase RJP_RS01055 IPR004412 Glutamyl-tRNA(Gln) amidotransferase A subunit RJP_RS01055 IPR020556 Amidase, conserved site RJP_RS01055 IPR023631 Amidase signature domain RJP_RS01060 IPR003837 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, C subunit RJP_RS01065 IPR002661 Ribosome recycling factor RJP_RS01065 IPR023584 Ribosome recycling factor domain RJP_RS01070 IPR001048 Aspartate/glutamate/uridylate kinase RJP_RS01070 IPR011817 Uridylate kinase RJP_RS01070 IPR015963 Uridylate kinase, bacteria RJP_RS01075 IPR002758 Na+/H+ antiporter subunit E RJP_RS01080 IPR004638 Drug resistance transporter EmrB/QacA subfamily RJP_RS01080 IPR011701 Major facilitator superfamily RJP_RS01080 IPR020846 Major facilitator superfamily domain RJP_RS01085 IPR024246 Protein of unknown function DUF2674 RJP_RS01105 IPR000184 Bacterial surface antigen (D15) RJP_RS01105 IPR010827 Surface antigen variable number RJP_RS01105 IPR023707 Outer membrane protein assembly factor BamA RJP_RS01110 IPR001478 PDZ domain RJP_RS01110 IPR004387 Peptidase M50, putative membrane-associated zinc metallopeptidase RJP_RS01110 IPR008915 Peptidase M50 RJP_RS01115 IPR006027 NusB/RsmB/TIM44 RJP_RS01115 IPR011605 NusB antitermination factor RJP_RS01120 IPR002877 Ribosomal RNA methyltransferase FtsJ domain RJP_RS01120 IPR015507 Ribosomal RNA large subunit methyltransferase E RJP_RS01120 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like RJP_RS01125 IPR029058 Alpha/Beta hydrolase fold RJP_RS01135 IPR005031 Streptomyces cyclase/dehydrase RJP_RS01135 IPR023393 START-like domain RJP_RS01140 IPR005728 Rickettsial palindromic element RJP_RS01140 IPR012875 Protein of unknown function DUF1674 RJP_RS01145 IPR006700 Ribosomal RNA small subunit methyltransferase E RJP_RS01145 IPR015947 PUA-like domain RJP_RS01145 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal RJP_RS01145 IPR029028 Alpha/beta knot methyltransferases RJP_RS01150 IPR007211 Protein of unknown function DUF378 RJP_RS01155 IPR001036 Acriflavin resistance protein RJP_RS01155 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains RJP_RS01160 IPR000119 Histone-like bacterial DNA-binding protein RJP_RS01160 IPR010992 Integration host factor (IHF)-like DNA-binding domain RJP_RS01160 IPR020816 Histone-like DNA-binding protein, conserved site RJP_RS01165 IPR027417 P-loop containing nucleoside triphosphate hydrolase RJP_RS01170 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain RJP_RS01170 IPR003593 AAA+ ATPase domain RJP_RS01170 IPR004125 Signal recognition particle, SRP54 subunit, M-domain RJP_RS01170 IPR004780 Signal recognition particle protein Ffh RJP_RS01170 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle RJP_RS01170 IPR022941 Signal recognition particle, SRP54 subunit RJP_RS01170 IPR027417 P-loop containing nucleoside triphosphate hydrolase RJP_RS01180 IPR001375 Peptidase S9, prolyl oligopeptidase, catalytic domain RJP_RS01180 IPR002470 Peptidase S9A, prolyl oligopeptidase RJP_RS01180 IPR029058 Alpha/Beta hydrolase fold RJP_RS01200 IPR004559 Coproporphyrinogen III oxidase, oxygen-independent related RJP_RS01200 IPR006638 Elongator protein 3/MiaB/NifB RJP_RS01200 IPR007197 Radical SAM RJP_RS01200 IPR010723 HemN, C-terminal domain RJP_RS01200 IPR023404 Radical SAM, alpha/beta horseshoe RJP_RS01230 IPR001991 Sodium:dicarboxylate symporter RJP_RS01230 IPR018107 Sodium:dicarboxylate symporter, conserved site RJP_RS01235 IPR004323 Divalent ion tolerance protein, CutA RJP_RS01235 IPR011322 Nitrogen regulatory PII-like, alpha/beta RJP_RS01240 IPR007115 6-pyruvoyl tetrahydropterin synthase/QueD family protein RJP_RS01245 IPR000089 Biotin/lipoyl attachment RJP_RS01245 IPR001078 2-oxoacid dehydrogenase acyltransferase, catalytic domain RJP_RS01245 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site RJP_RS01245 IPR004167 E3 binding RJP_RS01245 IPR006255 Dihydrolipoamide succinyltransferase RJP_RS01245 IPR011053 Single hybrid motif RJP_RS01245 IPR023213 Chloramphenicol acetyltransferase-like domain RJP_RS01250 IPR001017 Dehydrogenase, E1 component RJP_RS01250 IPR005475 Transketolase-like, pyrimidine-binding domain RJP_RS01250 IPR011603 2-oxoglutarate dehydrogenase E1 component RJP_RS01250 IPR029061 Thiamin diphosphate-binding fold RJP_RS01250 IPR031717 RJP_RS01250 RJP_RS01250 IPR032106 RJP_RS01250 RJP_RS01255 IPR001333 Peptidase M32, carboxypeptidase Taq metallopeptidase RJP_RS01260 IPR003395 RecF/RecN/SMC, N-terminal RJP_RS01260 IPR004604 DNA recombination/repair protein RecN RJP_RS01260 IPR027417 P-loop containing nucleoside triphosphate hydrolase RJP_RS01265 IPR011990 Tetratricopeptide-like helical domain RJP_RS01265 IPR017689 Outer membrane protein assembly factor BamD RJP_RS01275 IPR001305 Heat shock protein DnaJ, cysteine-rich domain RJP_RS01275 IPR001623 DnaJ domain RJP_RS01275 IPR002939 Chaperone DnaJ, C-terminal RJP_RS01275 IPR008971 HSP40/DnaJ peptide-binding RJP_RS01275 IPR012724 Chaperone DnaJ RJP_RS01275 IPR018253 DnaJ domain, conserved site RJP_RS01280 IPR012725 Chaperone DnaK RJP_RS01280 IPR013126 Heat shock protein 70 family RJP_RS01280 IPR018181 Heat shock protein 70, conserved site RJP_RS01280 IPR029047 Heat shock protein 70kD, peptide-binding domain RJP_RS01280 IPR029048 Heat shock protein 70kD, C-terminal domain RJP_RS01285 IPR001478 PDZ domain RJP_RS01285 IPR001940 Peptidase S1C RJP_RS01285 IPR009003 Trypsin-like cysteine/serine peptidase domain RJP_RS01300 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal RJP_RS01300 IPR027417 P-loop containing nucleoside triphosphate hydrolase RJP_RS01305 IPR009078 Ferritin-like superfamily RJP_RS01305 IPR011566 Ubiquinone biosynthesis protein Coq7 RJP_RS01305 IPR012347 Ferritin-related RJP_RS01310 IPR000298 Cytochrome c oxidase subunit III domain RJP_RS01310 IPR013833 Cytochrome c oxidase, subunit III, 4-helical bundle RJP_RS01310 IPR024791 Cytochrome c oxidase subunit III RJP_RS01315 IPR007039 Conjugal transfer TrbC/type IV secretion VirB2 RJP_RS01325 IPR001451 Bacterial transferase hexapeptide repeat RJP_RS01325 IPR005664 Tetrahydrodipicolinate N-succinyltransferase, transferase hexapeptide repeat family RJP_RS01325 IPR011004 Trimeric LpxA-like RJP_RS01325 IPR023180 Tetrahydrodipicolinate-N-succinyltransferase, chain A, domain 1 RJP_RS01340 IPR001264 Glycosyl transferase, family 51 RJP_RS01340 IPR001460 Penicillin-binding protein, transpeptidase RJP_RS01340 IPR009647 Penicillin-binding, C-terminal RJP_RS01340 IPR011815 Penicillin-binding protein 1C RJP_RS01340 IPR012338 Beta-lactamase/transpeptidase-like RJP_RS01340 IPR023346 Lysozyme-like domain RJP_RS01385 IPR006015 Universal stress protein A RJP_RS01385 IPR006016 UspA RJP_RS01385 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold RJP_RS01390 IPR011852 TRAP transporter solute receptor, TAXI family RJP_RS01400 IPR001041 2Fe-2S ferredoxin-type domain RJP_RS01400 IPR001055 Adrenodoxin RJP_RS01400 IPR012675 Beta-grasp domain RJP_RS01400 IPR018298 Adrenodoxin, iron-sulphur binding site RJP_RS01405 IPR010236 ISC system FeS cluster assembly, HscA chaperone RJP_RS01405 IPR013126 Heat shock protein 70 family RJP_RS01405 IPR018181 Heat shock protein 70, conserved site RJP_RS01405 IPR029047 Heat shock protein 70kD, peptide-binding domain RJP_RS01405 IPR029048 Heat shock protein 70kD, C-terminal domain RJP_RS01410 IPR001623 DnaJ domain RJP_RS01410 IPR004640 Co-chaperone Hsc20 RJP_RS01410 IPR009073 Co-chaperone HscB, C-terminal oligomerisation domain RJP_RS01415 IPR001352 Ribonuclease HII/HIII RJP_RS01415 IPR012337 Ribonuclease H-like domain RJP_RS01415 IPR022898 Ribonuclease HII RJP_RS01415 IPR024567 Ribonuclease HII/HIII domain RJP_RS01420 IPR001650 Helicase, C-terminal RJP_RS01420 IPR001943 UVR domain RJP_RS01420 IPR004807 UvrABC system, subunit B RJP_RS01420 IPR006935 Helicase/UvrB domain RJP_RS01420 IPR014001 Helicase, superfamily 1/2, ATP-binding domain RJP_RS01420 IPR024759 UvrB, YAD/RRR-motif-containing domain RJP_RS01420 IPR027417 P-loop containing nucleoside triphosphate hydrolase RJP_RS01425 IPR002109 Glutaredoxin RJP_RS01425 IPR011767 Glutaredoxin active site RJP_RS01425 IPR011900 Glutaredoxin, GrxC RJP_RS01425 IPR012336 Thioredoxin-like fold RJP_RS01425 IPR014025 Glutaredoxin subgroup RJP_RS01430 IPR003439 ABC transporter-like RJP_RS01430 IPR003593 AAA+ ATPase domain RJP_RS01430 IPR011527 ABC transporter type 1, transmembrane domain RJP_RS01430 IPR017871 ABC transporter, conserved site RJP_RS01430 IPR027417 P-loop containing nucleoside triphosphate hydrolase RJP_RS01435 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal RJP_RS01435 IPR005743 DNA gyrase, subunit A RJP_RS01435 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal beta-pinwheel RJP_RS01435 IPR013757 Type IIA DNA topoisomerase subunit A, alpha-helical domain RJP_RS01435 IPR013758 DNA topoisomerase, type IIA, subunit A/ C-terminal, alpha-beta RJP_RS01435 IPR013760 DNA topoisomerase, type IIA-like domain RJP_RS01435 IPR024946 Arginine repressor C-terminal-like domain RJP_RS01450 IPR001991 Sodium:dicarboxylate symporter RJP_RS01455 IPR001991 Sodium:dicarboxylate symporter RJP_RS01465 IPR007667 Hypoxia induced protein, domain RJP_RS01470 IPR007479 ISC system FeS cluster assembly, IscX RJP_RS01475 IPR000181 Formylmethionine deformylase RJP_RS01475 IPR023635 Peptide deformylase RJP_RS01480 IPR002376 Formyl transferase, N-terminal RJP_RS01480 IPR005793 Formyl transferase, C-terminal RJP_RS01480 IPR005794 Methionyl-tRNA formyltransferase RJP_RS01480 IPR011034 Formyl transferase, C-terminal-like RJP_RS01510 IPR005654 ATPase, AFG1-like RJP_RS01510 IPR027417 P-loop containing nucleoside triphosphate hydrolase RJP_RS01520 IPR003699 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA RJP_RS01525 IPR002110 Ankyrin repeat RJP_RS01525 IPR020683 Ankyrin repeat-containing domain RJP_RS01540 IPR003439 ABC transporter-like RJP_RS01540 IPR003593 AAA+ ATPase domain RJP_RS01540 IPR011527 ABC transporter type 1, transmembrane domain RJP_RS01540 IPR017871 ABC transporter, conserved site RJP_RS01540 IPR027417 P-loop containing nucleoside triphosphate hydrolase RJP_RS01545 IPR022715 Protein of unknown function DUF2671 RJP_RS01550 IPR002585 Cytochrome d ubiquinol oxidase, subunit I RJP_RS01555 IPR003317 Cytochrome d ubiquinol oxidase, subunit II RJP_RS01560 IPR006442 Type II toxin-antitoxin system, antitoxin Phd/YefM RJP_RS01565 IPR009614 Toxin YoeB RJP_RS01570 IPR001173 Glycosyltransferase 2-like RJP_RS01570 IPR029044 Nucleotide-diphospho-sugar transferases RJP_RS01575 IPR001431 Peptidase M16, zinc-binding site RJP_RS01575 IPR007863 Peptidase M16, C-terminal domain RJP_RS01575 IPR011237 Peptidase M16 domain RJP_RS01575 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like RJP_RS01575 IPR011765 Peptidase M16, N-terminal RJP_RS01580 IPR013816 ATP-grasp fold, subdomain 2 RJP_RS01580 IPR028923 SAICAR synthetase/ADE2, N-terminal RJP_RS01590 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ H/ P/ S), conserved domain RJP_RS01590 IPR002320 Threonine-tRNA ligase, class IIa RJP_RS01590 IPR004095 TGS RJP_RS01590 IPR004154 Anticodon-binding RJP_RS01590 IPR012675 Beta-grasp domain RJP_RS01590 IPR012676 TGS-like RJP_RS01590 IPR012947 Threonyl/alanyl tRNA synthetase, SAD RJP_RS01590 IPR018163 Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain RJP_RS01610 IPR003439 ABC transporter-like RJP_RS01610 IPR027417 P-loop containing nucleoside triphosphate hydrolase RJP_RS01615 IPR003439 ABC transporter-like RJP_RS01615 IPR017871 ABC transporter, conserved site RJP_RS01615 IPR027417 P-loop containing nucleoside triphosphate hydrolase RJP_RS01630 IPR022589 Protein of unknown function DUF2660 RJP_RS01640 IPR003423 Outer membrane efflux protein RJP_RS01640 IPR010130 Type I secretion outer membrane protein, TolC RJP_RS01645 IPR019632 Protein of unknown function DUF2497 RJP_RS01655 IPR020683 Ankyrin repeat-containing domain RJP_RS01660 IPR000565 DNA topoisomerase, type IIA, subunit B RJP_RS01660 IPR001241 DNA topoisomerase, type IIA RJP_RS01660 IPR002288 DNA gyrase B subunit, C-terminal RJP_RS01660 IPR003594 Histidine kinase-like ATPase, C-terminal domain RJP_RS01660 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative RJP_RS01660 IPR006171 Toprim domain RJP_RS01660 IPR013506 DNA topoisomerase, type IIA, subunit B, domain 2 RJP_RS01660 IPR013759 DNA topoisomerase, type IIA, central domain RJP_RS01660 IPR013760 DNA topoisomerase, type IIA-like domain RJP_RS01660 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup RJP_RS01660 IPR018522 DNA topoisomerase, type IIA, conserved site RJP_RS01660 IPR020568 Ribosomal protein S5 domain 2-type fold RJP_RS01665 IPR001478 PDZ domain RJP_RS01665 IPR004447 C-terminal-processing peptidase S41A RJP_RS01665 IPR005151 Tail specific protease RJP_RS01665 IPR029045 ClpP/crotonase-like domain RJP_RS01670 IPR003594 Histidine kinase-like ATPase, C-terminal domain RJP_RS01670 IPR003661 Signal transduction histidine kinase EnvZ-like, dimerisation/phosphoacceptor domain RJP_RS01670 IPR004358 Signal transduction histidine kinase-related protein, C-terminal RJP_RS01675 IPR011990 Tetratricopeptide-like helical domain RJP_RS01675 IPR014162 Tol-Pal system, YbgF RJP_RS01675 IPR019734 Tetratricopeptide repeat RJP_RS01680 IPR022588 Protein of unknown function DUF2659 RJP_RS01685 IPR002372 Pyrrolo-quinoline quinone repeat RJP_RS01685 IPR011047 Quinonprotein alcohol dehydrogenase-like superfamily RJP_RS01685 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat RJP_RS01685 IPR027295 Quinonprotein alcohol dehydrogenase-like domain RJP_RS01690 IPR005822 Ribosomal protein L13 RJP_RS01690 IPR005823 Ribosomal protein L13, bacterial-type RJP_RS01690 IPR023563 Ribosomal protein L13, conserved site RJP_RS01690 IPR023564 Ribosomal protein L13 domain RJP_RS01695 IPR000754 Ribosomal protein S9 RJP_RS01695 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup RJP_RS01695 IPR020568 Ribosomal protein S5 domain 2-type fold RJP_RS01695 IPR020574 Ribosomal protein S9, conserved site RJP_RS01695 IPR023035 Ribosomal protein S9, bacterial/plastid RJP_RS01705 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain RJP_RS01710 IPR000755 Peptidase M15D, VanX D-ala-D-ala dipeptidase RJP_RS01710 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain RJP_RS01725 IPR000086 NUDIX hydrolase domain RJP_RS01725 IPR015797 NUDIX hydrolase domain-like RJP_RS01725 IPR020084 NUDIX hydrolase, conserved site RJP_RS01725 IPR022927 RNA pyrophosphohydrolase RppH RJP_RS01730 IPR000160 GGDEF domain RJP_RS01730 IPR001789 Signal transduction response regulator, receiver domain RJP_RS01730 IPR011006 CheY-like superfamily RJP_RS01730 IPR029787 Nucleotide cyclase RJP_RS01735 IPR001059 Translation elongation factor P/YeiP, central RJP_RS01735 IPR008991 Translation protein SH3-like domain RJP_RS01735 IPR011768 Translation elongation factor P RJP_RS01735 IPR012340 Nucleic acid-binding, OB-fold RJP_RS01735 IPR013185 Translation elongation factor, KOW-like RJP_RS01735 IPR013852 Translation elongation factor P/YeiP, conserved site RJP_RS01735 IPR014722 Ribosomal protein L2 domain 2 RJP_RS01735 IPR015365 Elongation factor P, C-terminal RJP_RS01735 IPR020599 Translation elongation factor P/YeiP RJP_RS01740 IPR000760 Inositol monophosphatase RJP_RS01745 IPR021277 Protein of unknown function DUF2610 RJP_RS01750 IPR003817 Phosphatidylserine decarboxylase-related RJP_RS01750 IPR033175 RJP_RS01750 RJP_RS01755 IPR000462 CDP-alcohol phosphatidyltransferase RJP_RS01755 IPR012616 CDP-alcohol phosphatidyltransferase, C-terminal RJP_RS01760 IPR032317 RJP_RS01760 RJP_RS01775 IPR002634 BolA protein RJP_RS01780 IPR001633 EAL domain RJP_RS01785 IPR000713 Mur ligase, N-terminal RJP_RS01785 IPR004101 Mur ligase, C-terminal RJP_RS01785 IPR005758 UDP-N-acetylmuramate-alanine ligase RJP_RS01785 IPR013221 Mur ligase, central RJP_RS01785 IPR016040 NAD(P)-binding domain RJP_RS01790 IPR003170 UDP-N-acetylenolpyruvoylglucosamine reductase RJP_RS01790 IPR006094 FAD linked oxidase, N-terminal RJP_RS01790 IPR011601 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal RJP_RS01790 IPR016166 FAD-binding, type 2 RJP_RS01790 IPR016167 FAD-binding, type 2, subdomain 1 RJP_RS01790 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 RJP_RS01795 IPR000291 D-alanine--D-alanine ligase/VANA/B/C, conserved site RJP_RS01795 IPR005905 D-alanine--D-alanine ligase RJP_RS01795 IPR011095 D-alanine--D-alanine ligase, C-terminal RJP_RS01795 IPR011127 D-alanine--D-alanine ligase, N-terminal domain RJP_RS01795 IPR013815 ATP-grasp fold, subdomain 1 RJP_RS01795 IPR013816 ATP-grasp fold, subdomain 2 RJP_RS01795 IPR016185 Pre-ATP-grasp domain RJP_RS01800 IPR005548 Cell division protein FtsQ/DivIB RJP_RS01800 IPR013685 Polypeptide-transport-associated, FtsQ-type RJP_RS01800 IPR026579 Cell division protein FtsQ RJP_RS01805 IPR003494 SHS2 domain inserted in FtsA RJP_RS01805 IPR020823 Cell division protein FtsA RJP_RS01810 IPR002810 NfeD-like, C-terminal domain RJP_RS01810 IPR012340 Nucleic acid-binding, OB-fold RJP_RS01815 IPR002327 Cytochrome c, class IA/ IB RJP_RS01815 IPR009056 Cytochrome c-like domain RJP_RS01825 IPR004463 UDP-3-O-acyl N-acetylglucosamine deacetylase RJP_RS01825 IPR011334 UDP-3-O-acyl N-acetylglucosamine deacetylase, C-terminal RJP_RS01825 IPR015870 UDP-3-O-acyl N-acetylglucosamine deacetylase, N-terminal RJP_RS01825 IPR020568 Ribosomal protein S5 domain 2-type fold RJP_RS01830 IPR020846 Major facilitator superfamily domain RJP_RS01835 IPR003029 Ribosomal protein S1, RNA-binding domain RJP_RS01835 IPR004659 Ribonuclease E/G RJP_RS01835 IPR012340 Nucleic acid-binding, OB-fold RJP_RS01835 IPR019307 RNA-binding protein AU-1/Ribonuclease E/G RJP_RS01835 IPR022967 RNA-binding domain, S1 RJP_RS01840 IPR003780 COX15/CtaA family RJP_RS01840 IPR023754 Heme A synthase, type 2 RJP_RS01845 IPR002942 RNA-binding S4 domain RJP_RS01845 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F RJP_RS01845 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site RJP_RS01845 IPR020103 Pseudouridine synthase, catalytic domain RJP_RS01850 IPR001466 Beta-lactamase-related RJP_RS01850 IPR012338 Beta-lactamase/transpeptidase-like RJP_RS01855 IPR004808 AP endonuclease 1 RJP_RS01855 IPR005135 Endonuclease/exonuclease/phosphatase RJP_RS01855 IPR020847 AP endonuclease 1, binding site RJP_RS01860 IPR001017 Dehydrogenase, E1 component RJP_RS01860 IPR017597 Pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit, subgroup y RJP_RS01860 IPR029061 Thiamin diphosphate-binding fold RJP_RS01865 IPR005475 Transketolase-like, pyrimidine-binding domain RJP_RS01865 IPR009014 Transketolase, C-terminal/Pyruvate-ferredoxin oxidoreductase, domain II RJP_RS01865 IPR029061 Thiamin diphosphate-binding fold RJP_RS01865 IPR033247 RJP_RS01865 RJP_RS01865 IPR033248 RJP_RS01865 RJP_RS01870 IPR000640 Translation elongation factor EFG, V domain RJP_RS01870 IPR000795 Elongation factor, GTP-binding domain RJP_RS01870 IPR004161 Translation elongation factor EFTu/EF1A, domain 2 RJP_RS01870 IPR005225 Small GTP-binding protein domain RJP_RS01870 IPR006298 GTP-binding protein TypA RJP_RS01870 IPR009000 Translation protein, beta-barrel domain RJP_RS01870 IPR009022 Elongation factor G, III-V domain RJP_RS01870 IPR027417 P-loop containing nucleoside triphosphate hydrolase RJP_RS01870 IPR031157 RJP_RS01870 RJP_RS01885 IPR005632 Chaperone protein Skp RJP_RS01885 IPR024930 Skp domain RJP_RS01890 IPR001804 Isocitrate and isopropylmalate dehydrogenases family RJP_RS01890 IPR014273 Isocitrate dehydrogenase, alphaproteobacteria-type RJP_RS01890 IPR019818 Isocitrate/isopropylmalate dehydrogenase, conserved site RJP_RS01890 IPR024084 Isopropylmalate dehydrogenase-like domain RJP_RS01895 IPR005133 Na+/H+ antiporter subunit G RJP_RS01900 IPR007182 Na+/H+ antiporter MnhB subunit-related protein RJP_RS01900 IPR025383 Domain of unknown function DUF4040 RJP_RS01905 IPR003544 Cytochrome c-type biogenesis protein CcmB RJP_RS01910 IPR022714 Protein of unknown function DUF2670 RJP_RS01915 IPR005805 Rieske iron-sulphur protein, C-terminal RJP_RS01915 IPR006317 Ubiquinol-cytochrome c reductase, iron-sulphur subunit RJP_RS01915 IPR014349 Rieske iron-sulphur protein RJP_RS01915 IPR017941 Rieske [2Fe-2S] iron-sulphur domain RJP_RS01915 IPR019470 Ubiquitinol-cytochrome C reductase, Fe-S subunit, TAT signal RJP_RS01915 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal RJP_RS01920 IPR005798 Cytochrome b/b6, C-terminal RJP_RS01920 IPR016174 Di-haem cytochrome, transmembrane RJP_RS01920 IPR027387 Cytochrome b/b6-like domain RJP_RS01920 IPR030689 RJP_RS01920 RJP_RS01930 IPR002326 Cytochrome c1 RJP_RS01930 IPR009056 Cytochrome c-like domain RJP_RS01930 IPR021157 Cytochrome c1, transmembrane anchor, C-terminal RJP_RS01940 IPR002068 Alpha crystallin/Hsp20 domain RJP_RS01940 IPR008978 HSP20-like chaperone RJP_RS01940 IPR031107 RJP_RS01940 RJP_RS01950 IPR009362 Protein of unknown function DUF1016 RJP_RS01955 IPR009362 Protein of unknown function DUF1016 RJP_RS01960 IPR009362 Protein of unknown function DUF1016 RJP_RS01965 IPR000352 Peptide chain release factor class I/class II RJP_RS01965 IPR004374 Peptide chain release factor 2 RJP_RS01965 IPR005139 Peptide chain release factor RJP_RS01965 IPR014720 Double-stranded RNA-binding domain RJP_RS01970 IPR000640 Translation elongation factor EFG, V domain RJP_RS01970 IPR000795 Elongation factor, GTP-binding domain RJP_RS01970 IPR004161 Translation elongation factor EFTu/EF1A, domain 2 RJP_RS01970 IPR005225 Small GTP-binding protein domain RJP_RS01970 IPR006297 Elongation factor 4 RJP_RS01970 IPR009022 Elongation factor G, III-V domain RJP_RS01970 IPR013842 GTP-binding protein LepA, C-terminal RJP_RS01970 IPR027417 P-loop containing nucleoside triphosphate hydrolase RJP_RS01970 IPR031157 RJP_RS01970 RJP_RS01980 IPR010982 Lambda repressor-like, DNA-binding domain RJP_RS02010 IPR011989 Armadillo-like helical RJP_RS02010 IPR016024 Armadillo-type fold RJP_RS02040 IPR003607 HD/PDEase domain RJP_RS02050 IPR001182 Cell cycle protein FtsW/RodA RJP_RS02050 IPR011923 Rod shape-determining protein RodA RJP_RS02055 IPR001375 Peptidase S9, prolyl oligopeptidase, catalytic domain RJP_RS02055 IPR002470 Peptidase S9A, prolyl oligopeptidase RJP_RS02055 IPR022437 Rickettsia palindromic element RPE3 RJP_RS02055 IPR023302 Peptidase S9A, N-terminal domain RJP_RS02055 IPR029058 Alpha/Beta hydrolase fold RJP_RS02060 IPR001750 NADH:ubiquinone/plastoquinone oxidoreductase RJP_RS02065 IPR002716 PIN domain RJP_RS02065 IPR022907 VapC family RJP_RS02065 IPR029060 PIN domain-like RJP_RS02075 IPR001750 NADH:ubiquinone/plastoquinone oxidoreductase RJP_RS02080 IPR001750 NADH:ubiquinone/plastoquinone oxidoreductase RJP_RS02085 IPR001133 NADH-ubiquinone oxidoreductase chain 4L/K RJP_RS02090 IPR010258 Conjugal transfer, TrbG/VirB9/CagX RJP_RS02090 IPR014148 P-type conjugative transfer protein VirB9 RJP_RS02100 IPR024444 Protein of unknown function DUF2706 RJP_RS02105 IPR007430 Bacterial virulence protein VirB8 RJP_RS02105 IPR026264 Type IV secretion system protein VirB8/PtlE RJP_RS02105 IPR032710 RJP_RS02105 RJP_RS02110 IPR010258 Conjugal transfer, TrbG/VirB9/CagX RJP_RS02115 IPR005498 Type IV secretion system, VirB10 / TraB / TrbI RJP_RS02120 IPR001482 Type II secretion system protein E RJP_RS02120 IPR014155 Type IV secretion system protein VirB11 RJP_RS02120 IPR027417 P-loop containing nucleoside triphosphate hydrolase RJP_RS02125 IPR003688 Ti-type conjugative transfer system, TraG-like RJP_RS02125 IPR027417 P-loop containing nucleoside triphosphate hydrolase RJP_RS02130 IPR003695 Ppx/GppA phosphatase RJP_RS02145 IPR006944 Bacteriophage/Gene transfer agent portal protein RJP_RS02155 IPR020531 Uncharacterised protein family, RP296 RJP_RS02155 IPR022565 Protein of unknown function DUF2608 RJP_RS02160 IPR020531 Uncharacterised protein family, RP296 RJP_RS02160 IPR022565 Protein of unknown function DUF2608 RJP_RS02165 IPR000760 Inositol monophosphatase RJP_RS02165 IPR020550 Inositol monophosphatase, conserved site RJP_RS02165 IPR020583 Inositol monophosphatase, metal-binding site RJP_RS02170 IPR000432 DNA mismatch repair protein MutS, C-terminal RJP_RS02170 IPR005748 DNA mismatch repair protein MutS, type 1 RJP_RS02170 IPR007695 DNA mismatch repair protein MutS-like, N-terminal RJP_RS02170 IPR007696 DNA mismatch repair protein MutS, core RJP_RS02170 IPR007860 DNA mismatch repair protein MutS, connector domain RJP_RS02170 IPR007861 DNA mismatch repair protein MutS, clamp RJP_RS02170 IPR016151 DNA mismatch repair protein MutS, N-terminal RJP_RS02170 IPR027417 P-loop containing nucleoside triphosphate hydrolase RJP_RS02175 IPR003500 Sugar-phosphate isomerase, RpiB/LacA/LacB family RJP_RS02175 IPR004785 Ribose 5-phosphate isomerase B RJP_RS02180 IPR011055 Duplicated hybrid motif RJP_RS02180 IPR016047 Peptidase M23 RJP_RS02185 IPR002725 Protein of unknown function DUF45 RJP_RS02190 IPR003669 Thymidylate synthase ThyX RJP_RS02195 IPR007195 TolB, N-terminal RJP_RS02195 IPR011659 WD40-like Beta Propeller RJP_RS02195 IPR014167 Tol-Pal system beta propeller repeat-containing protein, TolB RJP_RS02195 IPR015943 WD40/YVTN repeat-like-containing domain RJP_RS02200 IPR000943 RNA polymerase sigma-70 RJP_RS02200 IPR007627 RNA polymerase sigma-70 region 2 RJP_RS02200 IPR007630 RNA polymerase sigma-70 region 4 RJP_RS02200 IPR009042 RNA polymerase sigma-70 region 1.2 RJP_RS02200 IPR011991 Winged helix-turn-helix DNA-binding domain RJP_RS02200 IPR012759 RNA polymerase sigma factor RpoH, proteobacteria RJP_RS02200 IPR013324 RNA polymerase sigma factor, region 3/4 RJP_RS02200 IPR013325 RNA polymerase sigma factor, region 2 RJP_RS02200 IPR014284 RNA polymerase sigma-70 like domain RJP_RS02200 IPR016263 RNA polymerase sporulation-specific sigma factor, SigK/SigE RJP_RS02205 IPR007533 Cytochrome c oxidase assembly protein CtaG/Cox11 RJP_RS02205 IPR023471 Cytochrome c oxidase assembly protein CtaG/Cox11, domain RJP_RS02210 IPR029044 Nucleotide-diphospho-sugar transferases RJP_RS02215 IPR004506 tRNA-specific 2-thiouridylase RJP_RS02215 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold RJP_RS02215 IPR023382 Adenine nucleotide alpha hydrolase-like domains RJP_RS02220 IPR002293 Amino acid/polyamine transporter I RJP_RS02225 IPR004154 Anticodon-binding RJP_RS02225 IPR004516 Histidine-tRNA ligase/ATP phosphoribosyltransferase regulatory subunit RJP_RS02225 IPR015807 Histidine-tRNA ligase RJP_RS02230 IPR003439 ABC transporter-like RJP_RS02230 IPR027417 P-loop containing nucleoside triphosphate hydrolase RJP_RS02235 IPR027417 P-loop containing nucleoside triphosphate hydrolase RJP_RS02235 IPR032781 RJP_RS02235 RJP_RS02240 IPR003439 ABC transporter-like RJP_RS02240 IPR027417 P-loop containing nucleoside triphosphate hydrolase RJP_RS02275 IPR002898 MotA/TolQ/ExbB proton channel RJP_RS02275 IPR014163 Tol-Pal system, TolQ RJP_RS02280 IPR003400 Biopolymer transport protein ExbD/TolR RJP_RS02280 IPR014168 Biopolymer transport, TolR RJP_RS02295 IPR003607 HD/PDEase domain RJP_RS02300 IPR011701 Major facilitator superfamily RJP_RS02300 IPR020846 Major facilitator superfamily domain RJP_RS02305 IPR003997 RTX secretion protein D, Gram-negative bacteria RJP_RS02305 IPR006144 Secretion protein HlyD, conserved site RJP_RS02305 IPR010129 Type I secretion membrane fusion protein, HlyD RJP_RS02310 IPR003439 ABC transporter-like RJP_RS02310 IPR003593 AAA+ ATPase domain RJP_RS02310 IPR010128 ATPase, type I secretion system, PrtD RJP_RS02310 IPR011527 ABC transporter type 1, transmembrane domain RJP_RS02310 IPR017871 ABC transporter, conserved site RJP_RS02310 IPR027417 P-loop containing nucleoside triphosphate hydrolase RJP_RS02315 IPR000534 Semialdehyde dehydrogenase, NAD-binding RJP_RS02315 IPR005986 Aspartate-semialdehyde dehydrogenase, beta-type RJP_RS02315 IPR012080 Aspartate-semialdehyde dehydrogenase RJP_RS02315 IPR012280 Semialdehyde dehydrogenase, dimerisation domain RJP_RS02315 IPR016040 NAD(P)-binding domain RJP_RS02320 IPR001310 Histidine triad (HIT) protein RJP_RS02320 IPR011146 HIT-like domain RJP_RS02320 IPR019808 Histidine triad, conserved site RJP_RS02330 IPR001353 Proteasome, subunit alpha/beta RJP_RS02330 IPR022281 ATP-dependent protease, HslV subunit RJP_RS02330 IPR029055 Nucleophile aminohydrolases, N-terminal RJP_RS02335 IPR003593 AAA+ ATPase domain RJP_RS02335 IPR003959 ATPase, AAA-type, core RJP_RS02335 IPR004491 Heat shock protein HslU RJP_RS02335 IPR019489 Clp ATPase, C-terminal RJP_RS02335 IPR027417 P-loop containing nucleoside triphosphate hydrolase RJP_RS02345 IPR000523 Magnesium chelatase, ChlI subunit RJP_RS02345 IPR004482 Mg chelatase-related protein RJP_RS02345 IPR027417 P-loop containing nucleoside triphosphate hydrolase RJP_RS02365 IPR000831 Trp repressor RJP_RS02370 IPR003835 Glycosyl transferase, family 19 RJP_RS02370 IPR022437 Rickettsia palindromic element RPE3 RJP_RS02380 IPR003770 Uncharacterised protein family UPF0755, YceG-like RJP_RS02380 IPR013087 Zinc finger C2H2-type/integrase DNA-binding domain RJP_RS02385 IPR002908 Frataxin/CyaY RJP_RS02385 IPR020895 Frataxin conserved site RJP_RS02390 IPR022438 Rickettsia palindromic element RPE5 RJP_RS02395 IPR020531 Uncharacterised protein family, RP296 RJP_RS02395 IPR022565 Protein of unknown function DUF2608 RJP_RS02410 IPR000924 Glutamyl/glutaminyl-tRNA synthetase RJP_RS02410 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site RJP_RS02410 IPR004527 Glutamate-tRNA ligase, bacterial/mitochondrial RJP_RS02410 IPR008925 Aminoacyl-tRNA synthetase, class I, anticodon-binding RJP_RS02410 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold RJP_RS02410 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain RJP_RS02410 IPR020061 Glutamyl/glutaminyl-tRNA synthetase, class Ib, alpha-bundle domain RJP_RS02410 IPR020751 Aminoacyl-tRNA synthetase, class I, anticodon-binding domain, subdomain 2 RJP_RS02415 IPR000380 DNA topoisomerase, type IA RJP_RS02415 IPR003601 DNA topoisomerase, type IA, domain 2 RJP_RS02415 IPR003602 DNA topoisomerase, type IA, DNA-binding domain RJP_RS02415 IPR005733 DNA topoisomerase I, bacterial-type RJP_RS02415 IPR006171 Toprim domain RJP_RS02415 IPR013497 DNA topoisomerase, type IA, central RJP_RS02415 IPR013498 DNA topoisomerase, type IA, zn finger RJP_RS02415 IPR013824 DNA topoisomerase, type IA, central region, subdomain 1 RJP_RS02415 IPR013825 DNA topoisomerase, type IA, central region, subdomain 2 RJP_RS02415 IPR023405 DNA topoisomerase, type IA, core domain RJP_RS02415 IPR023406 DNA topoisomerase, type IA, active site RJP_RS02415 IPR025589 Topoisomerase C-terminal repeat RJP_RS02415 IPR028612 DNA topoisomerase I, type IA RJP_RS02425 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant RJP_RS02425 IPR012336 Thioredoxin-like fold RJP_RS02425 IPR019479 Peroxiredoxin, C-terminal RJP_RS02425 IPR024706 Peroxiredoxin, AhpC-type RJP_RS02430 IPR001107 Band 7 protein RJP_RS02430 IPR001972 Stomatin family RJP_RS02430 IPR032435 RJP_RS02430 RJP_RS02440 IPR000917 Sulfatase RJP_RS02440 IPR012549 Domain of unknown function DUF1705 RJP_RS02440 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha RJP_RS02440 IPR017850 Alkaline-phosphatase-like, core domain RJP_RS02445 IPR005227 Resolvase, holliday junction-type, YqgF-like RJP_RS02445 IPR006641 YqgF/RNase H-like domain RJP_RS02445 IPR012337 Ribonuclease H-like domain RJP_RS02450 IPR001387 Cro/C1-type helix-turn-helix domain RJP_RS02450 IPR010982 Lambda repressor-like, DNA-binding domain RJP_RS02450 IPR013430 Toxin-antitoxin system, antidote protein, HigA RJP_RS02455 IPR005913 dTDP-4-dehydrorhamnose reductase RJP_RS02455 IPR016040 NAD(P)-binding domain RJP_RS02455 IPR029903 RJP_RS02455 RJP_RS02460 IPR003869 Polysaccharide biosynthesis protein, CapD-like domain RJP_RS02460 IPR013692 UDP-glucose 4-epimerase CapD, C-terminal domain RJP_RS02460 IPR016040 NAD(P)-binding domain RJP_RS02465 IPR003331 UDP-N-acetylglucosamine 2-epimerase RJP_RS02465 IPR029767 UDP-N-acetylglucosamine 2-epimerase, WecB-type RJP_RS02475 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like RJP_RS02480 IPR001173 Glycosyltransferase 2-like RJP_RS02480 IPR029044 Nucleotide-diphospho-sugar transferases RJP_RS02485 IPR006143 RND efflux pump, membrane fusion protein RJP_RS02490 IPR022565 Protein of unknown function DUF2608 RJP_RS02490 IPR023214 HAD-like domain RJP_RS02495 IPR000073 Alpha/beta hydrolase fold-1 RJP_RS02495 IPR029058 Alpha/Beta hydrolase fold RJP_RS02500 IPR001296 Glycosyl transferase, family 1 RJP_RS02500 IPR028098 Glycosyltransferase subfamily 4, N-terminal domain RJP_RS02520 IPR001912 Ribosomal protein S4/S9, N-terminal RJP_RS02520 IPR002942 RNA-binding S4 domain RJP_RS02520 IPR005709 Ribosomal protein S4, bacterial-type RJP_RS02520 IPR018079 Ribosomal protein S4, conserved site RJP_RS02520 IPR022801 Ribosomal protein S4/S9 RJP_RS02525 IPR000537 UbiA prenyltransferase family RJP_RS02525 IPR006369 Protohaem IX farnesyltransferase RJP_RS02525 IPR030470 RJP_RS02525 RJP_RS02535 IPR025494 Protein of unknown function DUF4385 RJP_RS02540 IPR011990 Tetratricopeptide-like helical domain RJP_RS02545 IPR007844 AsmA RJP_RS02550 IPR002676 RimM protein RJP_RS02550 IPR009000 Translation protein, beta-barrel domain RJP_RS02550 IPR011033 PRC-barrel-like RJP_RS02550 IPR011961 16S rRNA processing protein RimM RJP_RS02550 IPR027275 PRC-barrel domain RJP_RS02555 IPR032712 RJP_RS02555 RJP_RS02560 IPR003761 Exonuclease VII, small subunit RJP_RS02570 IPR022148 Protein of unknown function DUF3680 RJP_RS02580 IPR003180 Methylpurine-DNA glycosylase (MPG) RJP_RS02580 IPR011034 Formyl transferase, C-terminal-like RJP_RS02585 IPR002696 Putative membrane protein insertion efficiency factor RJP_RS02590 IPR002023 NADH-quinone oxidoreductase subunit E-like RJP_RS02590 IPR012336 Thioredoxin-like fold RJP_RS02595 IPR000305 GIY-YIG nuclease superfamily RJP_RS02600 IPR001135 NADH-quinone oxidoreductase, subunit D RJP_RS02600 IPR014029 NADH:ubiquinone oxidoreductase, 49kDa subunit, conserved site RJP_RS02600 IPR022885 NAD(P)H-quinone oxidoreductase subunit D/H RJP_RS02600 IPR029014 NiFe hydrogenase-like RJP_RS02605 IPR001268 NADH:ubiquinone oxidoreductase, 30kDa subunit RJP_RS02605 IPR010218 NADH dehydrogenase, subunit C RJP_RS02605 IPR022436 Rickettsia palindromic element RPE2 RJP_RS02610 IPR006137 NADH:ubiquinone oxidoreductase-like, 20kDa subunit RJP_RS02610 IPR006138 NADH-ubiquinone oxidoreductase, 20 Kd subunit RJP_RS02615 IPR000440 NADH:ubiquinone/plastoquinone oxidoreductase, chain 3 RJP_RS02615 IPR023043 NAD(P)H-quinone oxidoreductase subunit 3, bacterial/plastid RJP_RS02620 IPR007016 O-antigen ligase-related RJP_RS02625 IPR019225 Protein of unknown function DUF2155 RJP_RS02645 IPR002104 Integrase, catalytic RJP_RS02645 IPR004107 Integrase, SAM-like, N-terminal RJP_RS02645 IPR011010 DNA breaking-rejoining enzyme, catalytic core RJP_RS02645 IPR011932 Tyrosine recombinase XerD RJP_RS02645 IPR013762 Integrase-like, catalytic core RJP_RS02645 IPR023009 Tyrosine recombinase XerC/XerD RJP_RS02645 IPR023109 Integrase/recombinase, N-terminal RJP_RS02650 IPR020168 Uncharacterised protein family RP364 RJP_RS02655 IPR020168 Uncharacterised protein family RP364 RJP_RS02660 IPR002347 Glucose/ribitol dehydrogenase RJP_RS02660 IPR014358 Enoyl-[acyl-carrier-protein] reductase (NADH) RJP_RS02660 IPR016040 NAD(P)-binding domain RJP_RS02665 IPR003010 Carbon-nitrogen hydrolase RJP_RS02665 IPR004563 Apolipoprotein N-acyltransferase RJP_RS02670 IPR002477 Peptidoglycan binding-like RJP_RS02670 IPR002502 N-acetylmuramoyl-L-alanine amidase domain RJP_RS02675 IPR007487 ABC transporter, substrate-binding protein RJP_RS02675 IPR028082 Periplasmic binding protein-like I RJP_RS02680 IPR001851 ABC transporter, permease RJP_RS02685 IPR003439 ABC transporter-like RJP_RS02685 IPR003593 AAA+ ATPase domain RJP_RS02685 IPR027417 P-loop containing nucleoside triphosphate hydrolase RJP_RS02695 IPR002110 Ankyrin repeat RJP_RS02695 IPR020683 Ankyrin repeat-containing domain RJP_RS02700 IPR020683 Ankyrin repeat-containing domain RJP_RS02705 IPR020683 Ankyrin repeat-containing domain RJP_RS02710 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site RJP_RS02710 IPR002904 Lysine-tRNA ligase RJP_RS02710 IPR008925 Aminoacyl-tRNA synthetase, class I, anticodon-binding RJP_RS02710 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding RJP_RS02710 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold RJP_RS02710 IPR020751 Aminoacyl-tRNA synthetase, class I, anticodon-binding domain, subdomain 2 RJP_RS02715 IPR004776 Auxin efflux carrier RJP_RS02720 IPR002505 Phosphate acetyl/butaryl transferase RJP_RS02720 IPR012188 Malic enzyme, phosphate acetyl/butaryl transferase RJP_RS02720 IPR012301 Malic enzyme, N-terminal domain RJP_RS02720 IPR012302 Malic enzyme, NAD-binding RJP_RS02720 IPR015884 Malic enzyme, conserved site RJP_RS02720 IPR016040 NAD(P)-binding domain RJP_RS02730 IPR002716 PIN domain RJP_RS02730 IPR029060 PIN domain-like RJP_RS02735 IPR007159 AbrB-like domain RJP_RS02740 IPR011701 Major facilitator superfamily RJP_RS02740 IPR020846 Major facilitator superfamily domain RJP_RS02770 IPR001236 Lactate/malate dehydrogenase, N-terminal RJP_RS02770 IPR001557 L-lactate/malate dehydrogenase RJP_RS02770 IPR011275 Malate dehydrogenase, type 3 RJP_RS02770 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal RJP_RS02770 IPR016040 NAD(P)-binding domain RJP_RS02770 IPR022383 Lactate/malate dehydrogenase, C-terminal RJP_RS02785 IPR004667 ADP/ATP carrier protein RJP_RS02790 IPR004468 CTP synthase RJP_RS02790 IPR017456 CTP synthase, N-terminal RJP_RS02790 IPR017926 Glutamine amidotransferase RJP_RS02790 IPR027417 P-loop containing nucleoside triphosphate hydrolase RJP_RS02790 IPR029062 Class I glutamine amidotransferase-like RJP_RS02795 IPR003329 Acylneuraminate cytidylyltransferase RJP_RS02795 IPR004528 3-deoxy-D-manno-octulosonate cytidylyltransferase RJP_RS02795 IPR029044 Nucleotide-diphospho-sugar transferases RJP_RS02815 IPR000883 Cytochrome c oxidase subunit I RJP_RS02815 IPR023616 Cytochrome c oxidase, subunit I domain RJP_RS02820 IPR001474 GTP cyclohydrolase I RJP_RS02820 IPR018234 GTP cyclohydrolase I, conserved site RJP_RS02820 IPR020602 GTP cyclohydrolase I domain RJP_RS02825 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ H/ P/ S), conserved domain RJP_RS02825 IPR002316 Proline-tRNA ligase, class IIa RJP_RS02825 IPR004154 Anticodon-binding RJP_RS02825 IPR004500 Prolyl-tRNA synthetase, class IIa, bacterial-type RJP_RS02825 IPR023716 Proline-tRNA ligase, class IIa, type 2 RJP_RS02830 IPR003812 Fido domain RJP_RS02840 IPR000085 Bacterial DNA recombination protein RuvA RJP_RS02840 IPR010994 RuvA domain 2-like RJP_RS02840 IPR011114 DNA helicase, Holliday junction RuvA type, domain III, C-terminal RJP_RS02840 IPR012340 Nucleic acid-binding, OB-fold RJP_RS02840 IPR013849 DNA helicase, Holliday junction RuvA type, domain I, bacterial RJP_RS02850 IPR003593 AAA+ ATPase domain RJP_RS02850 IPR004605 DNA helicase, Holliday junction RuvB type RJP_RS02850 IPR008823 DNA helicase, Holliday junction RuvB type, C-terminal RJP_RS02850 IPR008824 DNA helicase, Holliday junction RuvB type, N-terminal RJP_RS02850 IPR011991 Winged helix-turn-helix DNA-binding domain RJP_RS02850 IPR027417 P-loop containing nucleoside triphosphate hydrolase RJP_RS02855 IPR003439 ABC transporter-like RJP_RS02855 IPR003593 AAA+ ATPase domain RJP_RS02855 IPR011527 ABC transporter type 1, transmembrane domain RJP_RS02855 IPR017871 ABC transporter, conserved site RJP_RS02855 IPR027417 P-loop containing nucleoside triphosphate hydrolase RJP_RS02860 IPR011701 Major facilitator superfamily RJP_RS02860 IPR020846 Major facilitator superfamily domain RJP_RS02865 IPR001967 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A, N-terminal RJP_RS02865 IPR012338 Beta-lactamase/transpeptidase-like RJP_RS02865 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A RJP_RS02870 IPR005728 Rickettsial palindromic element RJP_RS02870 IPR009009 RlpA-like double-psi beta-barrel domain RJP_RS02870 IPR012997 Rare lipoprotein A, bacterial RJP_RS02870 IPR022438 Rickettsia palindromic element RPE5 RJP_RS02875 IPR007055 BON domain RJP_RS02880 IPR006008 Intracellular septation protein A RJP_RS02885 IPR004923 Iron permease FTR1/Fip1/EfeU RJP_RS02895 IPR001179 Peptidyl-prolyl cis-trans isomerase, FKBP-type, domain RJP_RS02900 IPR000627 Intradiol ring-cleavage dioxygenase, C-terminal RJP_RS02900 IPR015889 Intradiol ring-cleavage dioxygenase, core RJP_RS02905 IPR012336 Thioredoxin-like fold RJP_RS02905 IPR013740 Redoxin RJP_RS02910 IPR002142 Peptidase S49 RJP_RS02910 IPR029045 ClpP/crotonase-like domain RJP_RS02915 IPR008180 Deoxyuridine triphosphate nucleotidohydrolase/Deoxycytidine triphosphate deaminase RJP_RS02915 IPR008181 Deoxyuridine triphosphate nucleotidohydrolase RJP_RS02915 IPR029054 dUTPase-like RJP_RS02920 IPR008258 Lytic transglycosylase-like SLT domain RJP_RS02920 IPR008939 Lytic transglycosylase, superhelical U-shaped RJP_RS02920 IPR016026 Lytic transglycosylase, superhelical U-shaped and linker domain RJP_RS02920 IPR023346 Lysozyme-like domain RJP_RS02930 IPR003507 Muramoyl-tetrapeptide carboxypeptidase RJP_RS02930 IPR027461 LD-carboxypeptidase A, C-terminal domain RJP_RS02930 IPR027478 Murein tetrapeptide carboxypeptidase, N-terminal domain RJP_RS02930 IPR029062 Class I glutamine amidotransferase-like RJP_RS02935 IPR011335 Restriction endonuclease type II-like RJP_RS02935 IPR022439 Rickettsia palindromic element RPE4 RJP_RS02935 IPR027417 P-loop containing nucleoside triphosphate hydrolase RJP_RS02945 IPR011697 Peptidase C26 RJP_RS02945 IPR029062 Class I glutamine amidotransferase-like RJP_RS02950 IPR000883 Cytochrome c oxidase subunit I RJP_RS02950 IPR014241 Cytochrome c oxidase, subunit I bacterial type RJP_RS02950 IPR023615 Cytochrome c oxidase, subunit I, copper-binding site RJP_RS02950 IPR023616 Cytochrome c oxidase, subunit I domain RJP_RS02960 IPR001505 Copper centre Cu(A) RJP_RS02960 IPR002429 Cytochrome c oxidase subunit II C-terminal RJP_RS02960 IPR005728 Rickettsial palindromic element RJP_RS02960 IPR008972 Cupredoxin RJP_RS02960 IPR011759 Cytochrome C oxidase subunit II, transmembrane domain RJP_RS02960 IPR014222 Cytochrome c oxidase, subunit II RJP_RS02970 IPR011055 Duplicated hybrid motif RJP_RS02970 IPR016047 Peptidase M23 RJP_RS02975 IPR001872 Peptidase A8, signal peptidase II RJP_RS02980 IPR004101 Mur ligase, C-terminal RJP_RS02980 IPR005762 UDP-N-acetylmuramoylalanine-D-glutamate ligase RJP_RS02980 IPR013221 Mur ligase, central RJP_RS02980 IPR018109 Folylpolyglutamate synthetase, conserved site RJP_RS02980 IPR022437 Rickettsia palindromic element RPE3 RJP_RS02985 IPR001182 Cell cycle protein FtsW/RodA RJP_RS02985 IPR013437 Cell division protein FtsW RJP_RS02990 IPR004276 Glycosyl transferase, family 28 RJP_RS02990 IPR006009 N-acetylglucosaminyltransferase, MurG RJP_RS02990 IPR007235 Glycosyl transferase, family 28, C-terminal RJP_RS02990 IPR022439 Rickettsia palindromic element RPE4 RJP_RS03005 IPR001036 Acriflavin resistance protein RJP_RS03005 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains RJP_RS03020 IPR001036 Acriflavin resistance protein RJP_RS03020 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains RJP_RS03030 IPR001036 Acriflavin resistance protein RJP_RS03045 IPR003423 Outer membrane efflux protein RJP_RS03050 IPR003423 Outer membrane efflux protein RJP_RS03055 IPR001296 Glycosyl transferase, family 1 RJP_RS03055 IPR028098 Glycosyltransferase subfamily 4, N-terminal domain RJP_RS03060 IPR010106 Conserved hypothetical protein CHP01784 RJP_RS03065 IPR001653 Diaminopimelate epimerase, DapF RJP_RS03065 IPR018510 Diaminopimelate epimerase, active site RJP_RS03070 IPR005839 Methylthiotransferase RJP_RS03070 IPR006467 MiaB-like tRNA modifying enzyme RJP_RS03070 IPR006638 Elongator protein 3/MiaB/NifB RJP_RS03070 IPR007197 Radical SAM RJP_RS03070 IPR013848 Methylthiotransferase, N-terminal RJP_RS03070 IPR020612 Methylthiotransferase, conserved site RJP_RS03070 IPR023404 Radical SAM, alpha/beta horseshoe RJP_RS03070 IPR023970 Methylthiotransferase/radical SAM-type protein RJP_RS03075 IPR002319 Phenylalanyl-tRNA synthetase RJP_RS03075 IPR004188 Phenylalanine-tRNA ligase, class II, N-terminal RJP_RS03075 IPR004529 Phenylalanyl-tRNA synthetase, class IIc, alpha subunit RJP_RS03075 IPR010978 tRNA-binding arm RJP_RS03075 IPR022911 Phenylalanine-tRNA ligase alpha chain 1, bacterial RJP_RS03080 IPR002547 tRNA-binding domain RJP_RS03080 IPR004532 Phenylalanine-tRNA ligase, class IIc, beta subunit RJP_RS03080 IPR005121 Phenylalanine-tRNA ligase, beta subunit, ferrodoxin-fold anticodon-binding RJP_RS03080 IPR005146 B3/B4 tRNA-binding domain RJP_RS03080 IPR005147 tRNA synthetase, B5-domain RJP_RS03080 IPR009061 DNA binding domain, putative RJP_RS03080 IPR012340 Nucleic acid-binding, OB-fold RJP_RS03080 IPR020825 Phenylalanyl-tRNA synthetase, B3/B4 RJP_RS03085 IPR001001 DNA polymerase III, beta chain RJP_RS03085 IPR022634 DNA polymerase III, beta chain, N-terminal RJP_RS03085 IPR022635 DNA polymerase III, beta chain, C-terminal RJP_RS03085 IPR022637 DNA polymerase III, beta chain, central RJP_RS03090 IPR023387 DUF1653-like domain RJP_RS03095 IPR021959 Protein of unknown function DUF3576 RJP_RS03100 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site RJP_RS03100 IPR002300 Aminoacyl-tRNA synthetase, class Ia RJP_RS03100 IPR002302 Leucine-tRNA ligase RJP_RS03100 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain RJP_RS03100 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding RJP_RS03100 IPR013155 Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding RJP_RS03100 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold RJP_RS03100 IPR025709 Leucyl-tRNA synthetase, editing domain RJP_RS03105 IPR002562 3'-5' exonuclease domain RJP_RS03105 IPR012337 Ribonuclease H-like domain RJP_RS03110 IPR007060 Septum formation initiator FtsL/DivIC RJP_RS03115 IPR000374 Phosphatidate cytidylyltransferase RJP_RS03120 IPR001441 Decaprenyl diphosphate synthase-like RJP_RS03120 IPR018520 Di-trans-poly-cis-decaprenylcistransferase-like, conserved site RJP_RS03125 IPR003594 Histidine kinase-like ATPase, C-terminal domain RJP_RS03125 IPR003661 Signal transduction histidine kinase EnvZ-like, dimerisation/phosphoacceptor domain RJP_RS03125 IPR004358 Signal transduction histidine kinase-related protein, C-terminal RJP_RS03125 IPR022437 Rickettsia palindromic element RPE3 RJP_RS03130 IPR001789 Signal transduction response regulator, receiver domain RJP_RS03130 IPR001867 Signal transduction response regulator, C-terminal RJP_RS03130 IPR011006 CheY-like superfamily RJP_RS03130 IPR011991 Winged helix-turn-helix DNA-binding domain RJP_RS03130 IPR016032 Signal transduction response regulator, C-terminal effector RJP_RS03135 IPR001544 Aminotransferase, class IV RJP_RS03135 IPR005785 Branched-chain amino acid aminotransferase I RJP_RS03135 IPR018300 Aminotransferase, class IV, conserved site RJP_RS03140 IPR002220 DapA-like RJP_RS03140 IPR005263 4-hydroxy-tetrahydrodipicolinate synthase, DapA RJP_RS03140 IPR013785 Aldolase-type TIM barrel RJP_RS03140 IPR020624 Dihydrodipicolinate synthetase, conserved site RJP_RS03140 IPR020625 Dihydrodipicolinate synthetase, active site RJP_RS03145 IPR000037 SsrA-binding protein RJP_RS03145 IPR020081 SsrA-binding protein, conserved site RJP_RS03145 IPR023620 Small protein B RJP_RS03150 IPR001853 DSBA-like thioredoxin domain RJP_RS03150 IPR012336 Thioredoxin-like fold RJP_RS03155 IPR003781 CoA-binding RJP_RS03155 IPR005810 Succinyl-CoA ligase, alpha subunit RJP_RS03155 IPR005811 ATP-citrate lyase/succinyl-CoA ligase RJP_RS03155 IPR016040 NAD(P)-binding domain RJP_RS03155 IPR016102 Succinyl-CoA synthetase-like RJP_RS03155 IPR017440 ATP-citrate lyase/succinyl-CoA ligase, active site RJP_RS03160 IPR005809 Succinyl-CoA synthetase, beta subunit RJP_RS03160 IPR005811 ATP-citrate lyase/succinyl-CoA ligase RJP_RS03160 IPR013650 ATP-grasp fold, succinyl-CoA synthetase-type RJP_RS03160 IPR013815 ATP-grasp fold, subdomain 1 RJP_RS03160 IPR013816 ATP-grasp fold, subdomain 2 RJP_RS03160 IPR016102 Succinyl-CoA synthetase-like RJP_RS03160 IPR017866 Succinyl-CoA synthetase, beta subunit, conserved site RJP_RS03165 IPR029060 PIN domain-like RJP_RS03170 IPR007159 AbrB-like domain RJP_RS03180 IPR011577 Cytochrome b561, bacterial/Ni-hydrogenase RJP_RS03180 IPR016174 Di-haem cytochrome, transmembrane RJP_RS03185 IPR001375 Peptidase S9, prolyl oligopeptidase, catalytic domain RJP_RS03185 IPR002470 Peptidase S9A, prolyl oligopeptidase RJP_RS03185 IPR015943 WD40/YVTN repeat-like-containing domain RJP_RS03185 IPR029058 Alpha/Beta hydrolase fold RJP_RS03190 IPR007379 Tim44-like domain RJP_RS03190 IPR032710 RJP_RS03190 RJP_RS03200 IPR000238 Ribosome-binding factor A RJP_RS03200 IPR015946 K homology domain-like, alpha/beta RJP_RS03200 IPR020053 Ribosome-binding factor A, conserved site RJP_RS03200 IPR023799 Ribosome-binding factor A domain RJP_RS03205 IPR020143 Uncharacterised protein family, RP436 RJP_RS03210 IPR010432 RDD RJP_RS03215 IPR000093 DNA recombination protein RecR RJP_RS03215 IPR006171 Toprim domain RJP_RS03215 IPR015967 Recombination protein RecR, conserved site RJP_RS03215 IPR023627 Recombination protein RecR RJP_RS03215 IPR023628 Recombination protein RecR, C4-type zinc finger RJP_RS03230 IPR002504 Inorganic polyphosphate/ATP-NAD kinase RJP_RS03230 IPR016064 ATP-NAD kinase-like domain RJP_RS03230 IPR017437 ATP-NAD kinase, PpnK-type, all-beta RJP_RS03230 IPR017438 Inorganic polyphosphate/ATP-NAD kinase, domain 1 RJP_RS03235 IPR001279 Beta-lactamase-like RJP_RS03235 IPR004613 Ribonuclease J RJP_RS03235 IPR011108 RNA-metabolising metallo-beta-lactamase RJP_RS03240 IPR006109 Glycerol-3-phosphate dehydrogenase, NAD-dependent, C-terminal RJP_RS03240 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent RJP_RS03240 IPR008927 6-phosphogluconate dehydrogenase, C-terminal-like RJP_RS03240 IPR011128 Glycerol-3-phosphate dehydrogenase, NAD-dependent, N-terminal RJP_RS03240 IPR013328 Dehydrogenase, multihelical RJP_RS03240 IPR016040 NAD(P)-binding domain RJP_RS03255 IPR000073 Alpha/beta hydrolase fold-1 RJP_RS03255 IPR029058 Alpha/Beta hydrolase fold RJP_RS03260 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II RJP_RS03260 IPR005982 Thioredoxin reductase RJP_RS03260 IPR008255 Pyridine nucleotide-disulphide oxidoreductase, class-II, active site RJP_RS03260 IPR023753 Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain RJP_RS03275 IPR015590 Aldehyde dehydrogenase domain RJP_RS03275 IPR016161 Aldehyde/histidinol dehydrogenase RJP_RS03275 IPR016162 Aldehyde dehydrogenase, N-terminal RJP_RS03275 IPR016163 Aldehyde dehydrogenase, C-terminal RJP_RS03275 IPR029510 Aldehyde dehydrogenase, glutamic acid active site RJP_RS03285 IPR001173 Glycosyltransferase 2-like RJP_RS03285 IPR029044 Nucleotide-diphospho-sugar transferases RJP_RS03290 IPR000212 DNA helicase, UvrD/REP type RJP_RS03290 IPR005751 ATP-dependent DNA helicase PcrA RJP_RS03290 IPR013986 DExx box DNA helicase domain RJP_RS03290 IPR014016 UvrD-like Helicase, ATP-binding domain RJP_RS03290 IPR014017 DNA helicase, UvrD-like, C-terminal RJP_RS03290 IPR027417 P-loop containing nucleoside triphosphate hydrolase RJP_RS03305 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme RJP_RS03310 IPR003111 Peptidase S16, lon N-terminal RJP_RS03310 IPR003593 AAA+ ATPase domain RJP_RS03310 IPR003959 ATPase, AAA-type, core RJP_RS03310 IPR004815 Lon protease, bacterial/eukaryotic-type RJP_RS03310 IPR008268 Peptidase S16, active site RJP_RS03310 IPR008269 Peptidase S16, Lon C-terminal RJP_RS03310 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup RJP_RS03310 IPR015947 PUA-like domain RJP_RS03310 IPR020568 Ribosomal protein S5 domain 2-type fold RJP_RS03310 IPR027065 Lon protease RJP_RS03310 IPR027417 P-loop containing nucleoside triphosphate hydrolase RJP_RS03310 IPR027543 Lon protease, bacterial RJP_RS03345 IPR003489 Ribosomal protein S30Ae/sigma 54 modulation protein RJP_RS03345 IPR032528 RJP_RS03345 RJP_RS03350 IPR001451 Bacterial transferase hexapeptide repeat RJP_RS03350 IPR011004 Trimeric LpxA-like RJP_RS03355 IPR011004 Trimeric LpxA-like RJP_RS03360 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase RJP_RS03360 IPR016040 NAD(P)-binding domain RJP_RS03360 IPR020630 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain RJP_RS03360 IPR020631 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain RJP_RS03360 IPR020867 Tetrahydrofolate dehydrogenase/cyclohydrolase, conserved site RJP_RS03365 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II RJP_RS03365 IPR022890 Ferredoxin--NADP reductase, type 2 RJP_RS03365 IPR023753 Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain RJP_RS03380 IPR008962 PapD-like RJP_RS03420 IPR007893 Spore coat protein U RJP_RS03430 IPR000788 Ribonucleotide reductase large subunit, C-terminal RJP_RS03430 IPR008926 Ribonucleotide reductase R1 subunit, N-terminal RJP_RS03430 IPR013509 Ribonucleotide reductase large subunit, N-terminal RJP_RS03445 IPR000358 Ribonucleotide reductase small subunit RJP_RS03445 IPR009078 Ferritin-like superfamily RJP_RS03445 IPR012348 Ribonucleotide reductase-related RJP_RS03450 IPR001646 Pentapeptide repeat RJP_RS03465 IPR018022 tRNA delta(2)-isopentenylpyrophosphate transferase RJP_RS03465 IPR027417 P-loop containing nucleoside triphosphate hydrolase RJP_RS03470 IPR005841 Alpha-D-phosphohexomutase superfamily RJP_RS03470 IPR005843 Alpha-D-phosphohexomutase, C-terminal RJP_RS03470 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I RJP_RS03470 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II RJP_RS03470 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III RJP_RS03470 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III RJP_RS03470 IPR016066 Alpha-D-phosphohexomutase, conserved site RJP_RS03475 IPR003439 ABC transporter-like RJP_RS03475 IPR003593 AAA+ ATPase domain RJP_RS03475 IPR017871 ABC transporter, conserved site RJP_RS03475 IPR027417 P-loop containing nucleoside triphosphate hydrolase RJP_RS03475 IPR030921 RJP_RS03475 RJP_RS03480 IPR005653 Organic solvent tolerance-like, N-terminal RJP_RS03480 IPR005728 Rickettsial palindromic element RJP_RS03485 IPR010664 Lipopolysaccharide assembly, LptC-related RJP_RS03490 IPR000644 CBS domain RJP_RS03490 IPR001347 Sugar isomerase (SIS) RJP_RS03490 IPR004800 Phosphosugar isomerase, KdsD/KpsF-type RJP_RS03495 IPR001247 Exoribonuclease, phosphorolytic domain 1 RJP_RS03495 IPR003029 Ribosomal protein S1, RNA-binding domain RJP_RS03495 IPR004087 K Homology domain RJP_RS03495 IPR004088 K Homology domain, type 1 RJP_RS03495 IPR012162 Polyribonucleotide nucleotidyltransferase RJP_RS03495 IPR012340 Nucleic acid-binding, OB-fold RJP_RS03495 IPR015847 Exoribonuclease, phosphorolytic domain 2 RJP_RS03495 IPR015848 Polyribonucleotide nucleotidyltransferase, RNA-binding domain RJP_RS03495 IPR020568 Ribosomal protein S5 domain 2-type fold RJP_RS03495 IPR022967 RNA-binding domain, S1 RJP_RS03495 IPR027408 PNPase/RNase PH domain RJP_RS03500 IPR000589 Ribosomal protein S15 RJP_RS03500 IPR005290 Ribosomal protein S15, bacterial-type RJP_RS03500 IPR009068 S15/NS1, RNA-binding RJP_RS03505 IPR002501 Pseudouridine synthase II RJP_RS03505 IPR005728 Rickettsial palindromic element RJP_RS03505 IPR014780 tRNA pseudouridine synthase II, TruB RJP_RS03505 IPR020103 Pseudouridine synthase, catalytic domain RJP_RS03505 IPR032819 RJP_RS03505 RJP_RS03510 IPR004667 ADP/ATP carrier protein RJP_RS03515 IPR020954 Rickettsia surface antigen, 120kDa RJP_RS03520 IPR001387 Cro/C1-type helix-turn-helix domain RJP_RS03520 IPR010982 Lambda repressor-like, DNA-binding domain RJP_RS03525 IPR017039 Virulence factor BrkB RJP_RS03530 IPR008146 Glutamine synthetase, catalytic domain RJP_RS03530 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain RJP_RS03535 IPR003730 Multi-copper polyphenol oxidoreductase, laccase RJP_RS03535 IPR011324 Cytotoxic necrotizing factor-like, catalytic RJP_RS03540 IPR000181 Formylmethionine deformylase RJP_RS03540 IPR023635 Peptide deformylase RJP_RS03555 IPR000121 PEP-utilising enzyme, C-terminal RJP_RS03555 IPR002192 Pyruvate phosphate dikinase, PEP/pyruvate-binding RJP_RS03555 IPR008279 PEP-utilising enzyme, mobile domain RJP_RS03555 IPR010121 Pyruvate, phosphate dikinase RJP_RS03555 IPR013815 ATP-grasp fold, subdomain 1 RJP_RS03555 IPR013816 ATP-grasp fold, subdomain 2 RJP_RS03555 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain RJP_RS03555 IPR018274 PEP-utilising enzyme, active site RJP_RS03555 IPR023151 PEP-utilising enzyme, conserved site RJP_RS03560 IPR004045 Glutathione S-transferase, N-terminal RJP_RS03560 IPR004046 Glutathione S-transferase, C-terminal RJP_RS03560 IPR010987 Glutathione S-transferase, C-terminal-like RJP_RS03560 IPR012336 Thioredoxin-like fold RJP_RS03565 IPR004408 Biotin--acetyl-CoA-carboxylase ligase RJP_RS03565 IPR015834 Uncharacterised conserved protein UCP016642, glutamine amidotransferase-like RJP_RS03565 IPR019197 Biotin-protein ligase, N-terminal RJP_RS03565 IPR029062 Class I glutamine amidotransferase-like RJP_RS03570 IPR003784 BioY protein RJP_RS03575 IPR001645 Folylpolyglutamate synthetase RJP_RS03575 IPR004101 Mur ligase, C-terminal RJP_RS03575 IPR013221 Mur ligase, central RJP_RS03575 IPR018109 Folylpolyglutamate synthetase, conserved site RJP_RS03585 IPR001189 Manganese/iron superoxide dismutase RJP_RS03585 IPR019831 Manganese/iron superoxide dismutase, N-terminal RJP_RS03585 IPR019832 Manganese/iron superoxide dismutase, C-terminal RJP_RS03585 IPR019833 Manganese/iron superoxide dismutase, binding site RJP_RS03600 IPR003142 Biotin protein ligase, C-terminal RJP_RS03600 IPR004143 Biotin/lipoate A/B protein ligase RJP_RS03600 IPR004408 Biotin--acetyl-CoA-carboxylase ligase RJP_RS03620 IPR019284 Xylella phage Xfas53, Orf42 RJP_RS03625 IPR001288 Translation initiation factor 3 RJP_RS03625 IPR019813 Translation initiation factor 3, conserved site RJP_RS03625 IPR019814 Translation initiation factor 3, N-terminal RJP_RS03625 IPR019815 Translation initiation factor 3, C-terminal RJP_RS03630 IPR000089 Biotin/lipoyl attachment RJP_RS03630 IPR001078 2-oxoacid dehydrogenase acyltransferase, catalytic domain RJP_RS03630 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site RJP_RS03630 IPR004167 E3 binding RJP_RS03630 IPR006257 Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex RJP_RS03630 IPR011053 Single hybrid motif RJP_RS03630 IPR023213 Chloramphenicol acetyltransferase-like domain RJP_RS03635 IPR000352 Peptide chain release factor class I/class II RJP_RS03635 IPR004373 Peptide chain release factor 1 RJP_RS03635 IPR005139 Peptide chain release factor RJP_RS03635 IPR014720 Double-stranded RNA-binding domain RJP_RS03640 IPR001667 DDH domain RJP_RS03640 IPR003156 DHHA1 domain RJP_RS03640 IPR004610 Bacterial RecJ exonuclease RJP_RS03645 IPR025714 Methyltransferase domain RJP_RS03645 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like RJP_RS03650 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain RJP_RS03650 IPR003593 AAA+ ATPase domain RJP_RS03650 IPR004665 Transcription termination factor Rho RJP_RS03650 IPR011112 Rho termination factor, N-terminal RJP_RS03650 IPR011113 Rho termination factor, RNA-binding RJP_RS03650 IPR011129 Cold shock protein RJP_RS03650 IPR012340 Nucleic acid-binding, OB-fold RJP_RS03650 IPR027417 P-loop containing nucleoside triphosphate hydrolase RJP_RS03655 IPR002142 Peptidase S49 RJP_RS03655 IPR004635 Peptidase S49, SppA RJP_RS03655 IPR029045 ClpP/crotonase-like domain RJP_RS03660 IPR000119 Histone-like bacterial DNA-binding protein RJP_RS03660 IPR010992 Integration host factor (IHF)-like DNA-binding domain RJP_RS03675 IPR005583 Uncharacterised protein family UPF0246 RJP_RS03715 IPR001387 Cro/C1-type helix-turn-helix domain RJP_RS03715 IPR010982 Lambda repressor-like, DNA-binding domain RJP_RS03720 IPR003136 Cytidylate kinase RJP_RS03720 IPR011994 Cytidylate kinase domain RJP_RS03720 IPR027417 P-loop containing nucleoside triphosphate hydrolase RJP_RS03725 IPR000110 Ribosomal protein S1 RJP_RS03725 IPR003029 Ribosomal protein S1, RNA-binding domain RJP_RS03725 IPR012340 Nucleic acid-binding, OB-fold RJP_RS03725 IPR022967 RNA-binding domain, S1 RJP_RS03730 IPR001907 ATP-dependent Clp protease proteolytic subunit RJP_RS03730 IPR018215 ClpP, active site RJP_RS03730 IPR023562 Clp protease proteolytic subunit /Translocation-enhancing protein TepA RJP_RS03730 IPR029045 ClpP/crotonase-like domain RJP_RS03730 IPR033135 RJP_RS03730 RJP_RS03740 IPR016181 Acyl-CoA N-acyltransferase RJP_RS03745 IPR000262 FMN-dependent dehydrogenase RJP_RS03745 IPR011179 Isopentenyl-diphosphate delta-isomerase, FMN-dependent RJP_RS03745 IPR013785 Aldolase-type TIM barrel RJP_RS03750 IPR016181 Acyl-CoA N-acyltransferase RJP_RS03755 IPR016181 Acyl-CoA N-acyltransferase RJP_RS03770 IPR025877 MobA-like NTP transferase domain RJP_RS03770 IPR029044 Nucleotide-diphospho-sugar transferases RJP_RS03775 IPR002876 Transcriptional regulator TACO1-like RJP_RS03775 IPR017856 Integrase, N-terminal zinc-binding domain-like RJP_RS03775 IPR026563 Transcriptional regulator TACO1-like, domain 2 RJP_RS03775 IPR026564 Transcriptional regulator TACO1-like, domain 3 RJP_RS03775 IPR029072 YebC-like RJP_RS03780 IPR000473 Ribosomal protein L36 RJP_RS03795 IPR008258 Lytic transglycosylase-like SLT domain RJP_RS03795 IPR023346 Lysozyme-like domain RJP_RS03800 IPR024386 Protein of unknown function DUF2532 RJP_RS03820 IPR002052 DNA methylase, N-6 adenine-specific, conserved site RJP_RS03820 IPR012327 D12 class N6 adenine-specific DNA methyltransferase RJP_RS03820 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like RJP_RS03840 IPR013216 Methyltransferase type 11 RJP_RS03840 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like RJP_RS03845 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain RJP_RS03845 IPR006258 Dihydrolipoamide dehydrogenase RJP_RS03845 IPR012999 Pyridine nucleotide-disulphide oxidoreductase, class I, active site RJP_RS03845 IPR016156 FAD/NAD-linked reductase, dimerisation domain RJP_RS03845 IPR023753 Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain RJP_RS03850 IPR002698 5-formyltetrahydrofolate cyclo-ligase RJP_RS03850 IPR024185 5-formyltetrahydrofolate cyclo-ligase-like domain RJP_RS03860 IPR002562 3'-5' exonuclease domain RJP_RS03860 IPR010997 HRDC-like RJP_RS03860 IPR012337 Ribonuclease H-like domain RJP_RS03865 IPR003734 Protein of unknown function DUF155 RJP_RS03870 IPR013977 Glycine cleavage T-protein, C-terminal barrel domain RJP_RS03870 IPR017703 YgfZ/GcvT conserved site RJP_RS03870 IPR022436 Rickettsia palindromic element RPE2 RJP_RS03880 IPR020683 Ankyrin repeat-containing domain RJP_RS03900 IPR003507 Muramoyl-tetrapeptide carboxypeptidase RJP_RS03900 IPR027461 LD-carboxypeptidase A, C-terminal domain RJP_RS03900 IPR027478 Murein tetrapeptide carboxypeptidase, N-terminal domain RJP_RS03900 IPR029062 Class I glutamine amidotransferase-like RJP_RS03905 IPR000860 Tetrapyrrole biosynthesis, hydroxymethylbilane synthase RJP_RS03905 IPR005728 Rickettsial palindromic element RJP_RS03905 IPR022417 Porphobilinogen deaminase, N-terminal RJP_RS03905 IPR022418 Porphobilinogen deaminase, C-terminal RJP_RS03905 IPR022419 Porphobilinogen deaminase, dipyrromethane cofactor binding site RJP_RS03920 IPR002305 Aminoacyl-tRNA synthetase, class Ic RJP_RS03920 IPR002306 Tryptophan-tRNA ligase RJP_RS03920 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold RJP_RS03920 IPR024109 Tryptophan-tRNA ligase, bacterial-type RJP_RS03925 IPR002123 Phospholipid/glycerol acyltransferase RJP_RS03930 IPR019291 Host attachment protein RJP_RS03945 IPR000383 Xaa-Pro dipeptidyl-peptidase-like domain RJP_RS03945 IPR029058 Alpha/Beta hydrolase fold RJP_RS03950 IPR010817 HemY, N-terminal RJP_RS03950 IPR011990 Tetratricopeptide-like helical domain RJP_RS03955 IPR022436 Rickettsia palindromic element RPE2 RJP_RS03960 IPR003754 Tetrapyrrole biosynthesis, uroporphyrinogen III synthase RJP_RS03965 IPR001123 Lysine-type exporter protein (LYSE/YGGA) RJP_RS03975 IPR011701 Major facilitator superfamily RJP_RS03975 IPR020846 Major facilitator superfamily domain RJP_RS03980 IPR006842 Transposase (putative), YhgA-like RJP_RS03985 IPR006842 Transposase (putative), YhgA-like RJP_RS03995 IPR002495 Glycosyl transferase, family 8 RJP_RS03995 IPR029044 Nucleotide-diphospho-sugar transferases RJP_RS04000 IPR002495 Glycosyl transferase, family 8 RJP_RS04000 IPR029044 Nucleotide-diphospho-sugar transferases RJP_RS04010 IPR004667 ADP/ATP carrier protein RJP_RS04025 IPR000092 Polyprenyl synthetase RJP_RS04025 IPR008949 Terpenoid synthase RJP_RS04025 IPR017446 Polyprenyl synthetase-related RJP_RS04040 IPR000587 Creatinase, N-terminal RJP_RS04040 IPR000994 Peptidase M24, structural domain RJP_RS04040 IPR005728 Rickettsial palindromic element RJP_RS04040 IPR028980 Creatinase/Aminopeptidase P, N-terminal RJP_RS04040 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal RJP_RS04040 IPR032416 RJP_RS04040 RJP_RS04045 IPR002293 Amino acid/polyamine transporter I RJP_RS04050 IPR018392 LysM domain RJP_RS04055 IPR000361 FeS cluster biogenesis RJP_RS04055 IPR016092 FeS cluster insertion protein RJP_RS04055 IPR017870 FeS cluster insertion, C-terminal, conserved site RJP_RS04060 IPR002871 NIF system FeS cluster assembly, NifU, N-terminal RJP_RS04060 IPR011339 ISC system FeS cluster assembly, IscU scaffold RJP_RS04065 IPR000192 Aminotransferase class V domain RJP_RS04065 IPR010240 Cysteine desulfurase RJP_RS04065 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 RJP_RS04065 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 RJP_RS04065 IPR015424 Pyridoxal phosphate-dependent transferase RJP_RS04065 IPR016454 Cysteine desulfurase, NifS RJP_RS04065 IPR020578 Aminotransferase class-V pyridoxal-phosphate binding site RJP_RS04070 IPR000192 Aminotransferase class V domain RJP_RS04070 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 RJP_RS04070 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 RJP_RS04070 IPR015424 Pyridoxal phosphate-dependent transferase RJP_RS04070 IPR016454 Cysteine desulfurase, NifS RJP_RS04070 IPR020578 Aminotransferase class-V pyridoxal-phosphate binding site RJP_RS04075 IPR000944 Transcription regulator Rrf2-like RJP_RS04075 IPR011991 Winged helix-turn-helix DNA-binding domain RJP_RS04090 IPR009574 Protein of unknown function DUF1189 RJP_RS04095 IPR006842 Transposase (putative), YhgA-like RJP_RS04125 IPR011989 Armadillo-like helical RJP_RS04125 IPR016024 Armadillo-type fold RJP_RS04130 IPR001750 NADH:ubiquinone/plastoquinone oxidoreductase RJP_RS04130 IPR010096 NAD(P)H-quinone oxidoreductase, subunit N/subunit 2 RJP_RS04140 IPR001731 Porphobilinogen synthase RJP_RS04140 IPR013785 Aldolase-type TIM barrel RJP_RS04155 IPR001650 Helicase, C-terminal RJP_RS04155 IPR005259 Primosomal protein n RJP_RS04155 IPR011545 DEAD/DEAH box helicase domain RJP_RS04155 IPR014001 Helicase, superfamily 1/2, ATP-binding domain RJP_RS04155 IPR027417 P-loop containing nucleoside triphosphate hydrolase RJP_RS04160 IPR003382 Flavoprotein RJP_RS04160 IPR004507 Decarboxylase UbiX/Pad1 RJP_RS04165 IPR007692 DNA helicase, DnaB type RJP_RS04165 IPR007693 DNA helicase, DnaB-like, N-terminal RJP_RS04165 IPR007694 DNA helicase, DnaB-like, C-terminal RJP_RS04165 IPR016136 DNA helicase DnaB, N-terminal/DNA primase DnaG, C-terminal RJP_RS04165 IPR027417 P-loop containing nucleoside triphosphate hydrolase RJP_RS04185 IPR018227 Tryptophan/tyrosine permease RJP_RS04190 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F RJP_RS04190 IPR002942 RNA-binding S4 domain RJP_RS04190 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F RJP_RS04190 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site RJP_RS04190 IPR020103 Pseudouridine synthase, catalytic domain RJP_RS04200 IPR002052 DNA methylase, N-6 adenine-specific, conserved site RJP_RS04200 IPR005728 Rickettsial palindromic element RJP_RS04200 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like RJP_RS04205 IPR003593 AAA+ ATPase domain RJP_RS04205 IPR004504 DNA repair protein RadA RJP_RS04205 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup RJP_RS04205 IPR020568 Ribosomal protein S5 domain 2-type fold RJP_RS04205 IPR027417 P-loop containing nucleoside triphosphate hydrolase RJP_RS04215 IPR003717 Recombination protein O, RecO RJP_RS04215 IPR012340 Nucleic acid-binding, OB-fold RJP_RS04215 IPR022572 DNA replication/recombination mediator RecO, N-terminal RJP_RS04220 IPR000905 Gcp-like domain RJP_RS04220 IPR022496 tRNA threonylcarbamoyl adenosine modification protein YeaZ RJP_RS04230 IPR000178 Translation initiation factor aIF-2, bacterial-like RJP_RS04230 IPR005225 Small GTP-binding protein domain RJP_RS04230 IPR006847 Translation initiation factor IF-2, N-terminal RJP_RS04230 IPR009000 Translation protein, beta-barrel domain RJP_RS04230 IPR023115 Translation initiation factor IF- 2, domain 3 RJP_RS04230 IPR027417 P-loop containing nucleoside triphosphate hydrolase RJP_RS04235 IPR003029 Ribosomal protein S1, RNA-binding domain RJP_RS04235 IPR004087 K Homology domain RJP_RS04235 IPR009019 K homology domain, prokaryotic type RJP_RS04235 IPR010213 Transcription termination factor NusA RJP_RS04235 IPR010214 Transcription termination factor NusA, C-terminal duplication RJP_RS04235 IPR010995 DNA repair Rad51/transcription factor NusA, alpha-helical RJP_RS04235 IPR012340 Nucleic acid-binding, OB-fold RJP_RS04235 IPR013735 Transcription factor NusA, N-terminal RJP_RS04235 IPR015946 K homology domain-like, alpha/beta RJP_RS04235 IPR022967 RNA-binding domain, S1 RJP_RS04235 IPR025249 KH domain, NusA-like RJP_RS04235 IPR030842 RJP_RS04235 RJP_RS04240 IPR003728 Ribosome maturation factor RimP RJP_RS04240 IPR028989 Ribosome maturation factor RimP, N-terminal RJP_RS04240 IPR028998 Ribosome maturation factor RimP, C-terminal RJP_RS04255 IPR000944 Transcription regulator Rrf2-like RJP_RS04255 IPR011991 Winged helix-turn-helix DNA-binding domain RJP_RS04255 IPR030489 RJP_RS04255 RJP_RS04260 IPR002877 Ribosomal RNA methyltransferase FtsJ domain RJP_RS04260 IPR002942 RNA-binding S4 domain RJP_RS04260 IPR004538 Haemolysin A RJP_RS04260 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like RJP_RS04265 IPR002305 Aminoacyl-tRNA synthetase, class Ic RJP_RS04265 IPR002307 Tyrosine-tRNA ligase RJP_RS04265 IPR002942 RNA-binding S4 domain RJP_RS04265 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold RJP_RS04265 IPR024088 Tyrosine-tRNA ligase, bacterial-type RJP_RS04265 IPR024107 Tyrosine-tRNA ligase, bacterial-type, type 1 RJP_RS04275 IPR022148 Protein of unknown function DUF3680 RJP_RS04300 IPR003346 Transposase, IS116/IS110/IS902 RJP_RS04315 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase RJP_RS04320 IPR001599 Alpha-2-macroglobulin RJP_RS04320 IPR002890 Alpha-2-macroglobulin, N-terminal RJP_RS04320 IPR008930 Terpenoid cyclases/protein prenyltransferase alpha-alpha toroid RJP_RS04320 IPR011625 Alpha-2-macroglobulin, N-terminal 2 RJP_RS04320 IPR021868 Alpha-2-macroglobulin MG1 domain RJP_RS04330 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal RJP_RS04330 IPR008927 6-phosphogluconate dehydrogenase, C-terminal-like RJP_RS04330 IPR013328 Dehydrogenase, multihelical RJP_RS04330 IPR016040 NAD(P)-binding domain RJP_RS04335 IPR006176 3-hydroxyacyl-CoA dehydrogenase, NAD binding RJP_RS04335 IPR016040 NAD(P)-binding domain RJP_RS04340 IPR029057 Phosphoribosyltransferase-like RJP_RS04365 IPR002938 Monooxygenase, FAD-binding RJP_RS04365 IPR005728 Rickettsial palindromic element RJP_RS04365 IPR010971 Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/UbiI/COQ6 RJP_RS04365 IPR011295 2-polyprenyl-6-methoxyphenol 4-hydroxylase RJP_RS04365 IPR018168 Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6, conserved site RJP_RS04365 IPR023753 Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain RJP_RS04375 IPR001646 Pentapeptide repeat RJP_RS04385 IPR001460 Penicillin-binding protein, transpeptidase RJP_RS04385 IPR005311 Penicillin-binding protein, dimerisation domain RJP_RS04385 IPR012338 Beta-lactamase/transpeptidase-like RJP_RS04385 IPR017790 Penicillin-binding protein 2 RJP_RS04400 IPR001460 Penicillin-binding protein, transpeptidase RJP_RS04400 IPR005311 Penicillin-binding protein, dimerisation domain RJP_RS04400 IPR012338 Beta-lactamase/transpeptidase-like RJP_RS04410 IPR002903 Ribosomal RNA small subunit methyltransferase H RJP_RS04410 IPR023397 S-adenosyl-L-methionine-dependent methyltransferase, MraW, recognition domain RJP_RS04410 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like RJP_RS04415 IPR003444 MraZ RJP_RS04415 IPR020603 MraZ domain RJP_RS04425 IPR001734 Sodium/solute symporter RJP_RS04440 IPR000305 GIY-YIG nuclease superfamily RJP_RS04440 IPR001162 UvrC family homology region RJP_RS04440 IPR001943 UVR domain RJP_RS04440 IPR004791 UvrABC system, subunit C RJP_RS04440 IPR010994 RuvA domain 2-like RJP_RS04440 IPR027299 GIY-YIG domain RJP_RS04445 IPR007410 DR1885-like metal-binding protein RJP_RS04450 IPR014825 DNA alkylation repair enzyme RJP_RS04450 IPR016024 Armadillo-type fold RJP_RS04495 IPR002104 Integrase, catalytic RJP_RS04495 IPR011010 DNA breaking-rejoining enzyme, catalytic core RJP_RS04495 IPR013762 Integrase-like, catalytic core RJP_RS04505 IPR003594 Histidine kinase-like ATPase, C-terminal domain RJP_RS04515 IPR002110 Ankyrin repeat RJP_RS04515 IPR020683 Ankyrin repeat-containing domain RJP_RS04520 IPR002110 Ankyrin repeat RJP_RS04520 IPR020683 Ankyrin repeat-containing domain RJP_RS04565 IPR000185 Protein translocase subunit SecA RJP_RS04565 IPR004027 SEC-C motif RJP_RS04565 IPR011115 SecA DEAD-like, N-terminal RJP_RS04565 IPR011116 SecA Wing/Scaffold RJP_RS04565 IPR011130 SecA preprotein, cross-linking domain RJP_RS04565 IPR020937 SecA conserved site RJP_RS04565 IPR027417 P-loop containing nucleoside triphosphate hydrolase RJP_RS04575 IPR002582 Holo-[acyl carrier protein] synthase RJP_RS04575 IPR004568 Phosphopantethiene-protein transferase domain RJP_RS04575 IPR008278 4'-phosphopantetheinyl transferase superfamily RJP_RS04580 IPR003716 DNA-directed RNA polymerase, omega subunit RJP_RS04580 IPR006110 RNA polymerase, subunit omega/K/RPB6 RJP_RS04580 IPR012293 RNA polymerase subunit, RPB6/omega RJP_RS04585 IPR001986 Enolpyruvate transferase domain RJP_RS04585 IPR005750 UDP-N-acetylglucosamine 1-carboxyvinyltransferase RJP_RS04585 IPR013792 RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta RJP_RS04590 IPR000565 DNA topoisomerase, type IIA, subunit B RJP_RS04590 IPR001241 DNA topoisomerase, type IIA RJP_RS04590 IPR002288 DNA gyrase B subunit, C-terminal RJP_RS04590 IPR003594 Histidine kinase-like ATPase, C-terminal domain RJP_RS04590 IPR006171 Toprim domain RJP_RS04590 IPR011557 DNA gyrase, subunit B RJP_RS04590 IPR013506 DNA topoisomerase, type IIA, subunit B, domain 2 RJP_RS04590 IPR013759 DNA topoisomerase, type IIA, central domain RJP_RS04590 IPR013760 DNA topoisomerase, type IIA-like domain RJP_RS04590 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup RJP_RS04590 IPR018522 DNA topoisomerase, type IIA, conserved site RJP_RS04590 IPR020568 Ribosomal protein S5 domain 2-type fold RJP_RS04595 IPR006356 HAD-superfamily hydrolase, subfamily IIA, hypothetical 3 RJP_RS04595 IPR006357 HAD-superfamily hydrolase, subfamily IIA RJP_RS04595 IPR023214 HAD-like domain RJP_RS04605 IPR000644 CBS domain RJP_RS04605 IPR006667 SLC41 divalent cation transporters, integral membrane domain RJP_RS04605 IPR006668 Magnesium transporter, MgtE intracellular domain RJP_RS04605 IPR006669 Magnesium transporter MgtE RJP_RS04620 IPR020846 Major facilitator superfamily domain RJP_RS04650 IPR020846 Major facilitator superfamily domain RJP_RS04660 IPR027417 P-loop containing nucleoside triphosphate hydrolase RJP_RS04665 IPR002549 Uncharacterised protein family UPF0118 RJP_RS04670 IPR000740 GrpE nucleotide exchange factor RJP_RS04670 IPR009012 GrpE nucleotide exchange factor, head RJP_RS04670 IPR013805 GrpE nucleotide exchange factor, coiled-coil RJP_RS04675 IPR001247 Exoribonuclease, phosphorolytic domain 1 RJP_RS04675 IPR002381 Ribonuclease phosphorolytic, bacterial-type RJP_RS04675 IPR015847 Exoribonuclease, phosphorolytic domain 2 RJP_RS04675 IPR018336 Ribonuclease PH, conserved site RJP_RS04675 IPR020568 Ribosomal protein S5 domain 2-type fold RJP_RS04675 IPR027408 PNPase/RNase PH domain RJP_RS04695 IPR011032 GroES (chaperonin 10)-like RJP_RS04695 IPR018369 Chaperonin Cpn10, conserved site RJP_RS04695 IPR020818 Chaperonin Cpn10 RJP_RS04700 IPR001844 Chaperonin Cpn60 RJP_RS04700 IPR002423 Chaperonin Cpn60/TCP-1 RJP_RS04700 IPR018370 Chaperonin Cpn60, conserved site RJP_RS04700 IPR027409 GroEL-like apical domain RJP_RS04700 IPR027413 GroEL-like equatorial domain RJP_RS04715 IPR010642 Invasion protein B RJP_RS04720 IPR000924 Glutamyl/glutaminyl-tRNA synthetase RJP_RS04720 IPR004527 Glutamate-tRNA ligase, bacterial/mitochondrial RJP_RS04720 IPR005728 Rickettsial palindromic element RJP_RS04720 IPR008925 Aminoacyl-tRNA synthetase, class I, anticodon-binding RJP_RS04720 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold RJP_RS04720 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain RJP_RS04720 IPR020061 Glutamyl/glutaminyl-tRNA synthetase, class Ib, alpha-bundle domain RJP_RS04720 IPR020751 Aminoacyl-tRNA synthetase, class I, anticodon-binding domain, subdomain 2 RJP_RS04725 IPR005728 Rickettsial palindromic element RJP_RS04725 IPR010233 Ubiquinone biosynthesis O-methyltransferase RJP_RS04725 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like RJP_RS04730 IPR001626 ABC-3 RJP_RS04730 IPR029022 ABC transporter, BtuC-like RJP_RS04735 IPR007076 TfoX, N-terminal RJP_RS04740 IPR000873 AMP-dependent synthetase/ligase RJP_RS04740 IPR002123 Phospholipid/glycerol acyltransferase RJP_RS04740 IPR011701 Major facilitator superfamily RJP_RS04740 IPR020845 AMP-binding, conserved site RJP_RS04740 IPR020846 Major facilitator superfamily domain RJP_RS04750 IPR000022 Carboxyl transferase RJP_RS04750 IPR029045 ClpP/crotonase-like domain RJP_RS04755 IPR000089 Biotin/lipoyl attachment RJP_RS04755 IPR001882 Biotin-binding site RJP_RS04755 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain RJP_RS04755 IPR005481 Carbamoyl-phosphate synthase, large subunit, N-terminal RJP_RS04755 IPR005482 Biotin carboxylase, C-terminal RJP_RS04755 IPR011053 Single hybrid motif RJP_RS04755 IPR011054 Rudiment single hybrid motif RJP_RS04755 IPR013815 ATP-grasp fold, subdomain 1 RJP_RS04755 IPR013816 ATP-grasp fold, subdomain 2 RJP_RS04755 IPR016185 Pre-ATP-grasp domain RJP_RS04760 IPR011990 Tetratricopeptide-like helical domain RJP_RS04765 IPR020683 Ankyrin repeat-containing domain RJP_RS04775 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site RJP_RS04775 IPR002300 Aminoacyl-tRNA synthetase, class Ia RJP_RS04775 IPR002301 Isoleucine-tRNA ligase RJP_RS04775 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain RJP_RS04775 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding RJP_RS04775 IPR013155 Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding RJP_RS04775 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold RJP_RS04775 IPR023586 Isoleucine-tRNA ligase, type 2 RJP_RS04795 IPR012762 Ubiquinone biosynthesis protein COQ9 RJP_RS04795 IPR013718 COQ9 RJP_RS04800 IPR001911 Ribosomal protein S21 RJP_RS04805 IPR003594 Histidine kinase-like ATPase, C-terminal domain RJP_RS04805 IPR003660 HAMP linker domain RJP_RS04805 IPR003661 Signal transduction histidine kinase EnvZ-like, dimerisation/phosphoacceptor domain RJP_RS04805 IPR004358 Signal transduction histidine kinase-related protein, C-terminal RJP_RS04835 IPR002523 Mg2+ transporter protein, CorA-like/Zinc transport protein ZntB RJP_RS04850 IPR020683 Ankyrin repeat-containing domain RJP_RS04855 IPR000100 Ribonuclease P RJP_RS04855 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup RJP_RS04855 IPR020539 Ribonuclease P, conserved site RJP_RS04855 IPR020568 Ribosomal protein S5 domain 2-type fold RJP_RS04860 IPR000271 Ribosomal protein L34 RJP_RS04860 IPR020939 Ribosomal protein L34, conserved site RJP_RS04865 IPR005813 Ribosomal protein L20 RJP_RS04870 IPR001706 Ribosomal protein L35, non-mitochondrial RJP_RS04870 IPR018265 Ribosomal protein L35, conserved site RJP_RS04870 IPR021137 Ribosomal protein L35 RJP_RS04875 IPR007197 Radical SAM RJP_RS04875 IPR013785 Aldolase-type TIM barrel RJP_RS04875 IPR024924 7-carboxy-7-deazaguanine synthase-like RJP_RS04890 IPR001021 Ribosomal protein L25, long-form RJP_RS04890 IPR011035 Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain RJP_RS04890 IPR020055 Ribosomal protein L25, short-form RJP_RS04890 IPR020056 Ribosomal protein L25/Gln-tRNA synthetase, beta-barrel domain RJP_RS04890 IPR020057 Ribosomal protein L25, beta domain RJP_RS04890 IPR029751 Ribosomal protein L25 RJP_RS04895 IPR001328 Peptidyl-tRNA hydrolase RJP_RS04895 IPR018171 Peptidyl-tRNA hydrolase, conserved site RJP_RS04905 IPR016181 Acyl-CoA N-acyltransferase RJP_RS04910 IPR004396 Ribosome-binding ATPase YchF/Obg-like ATPase 1 RJP_RS04910 IPR006073 GTP binding domain RJP_RS04910 IPR012675 Beta-grasp domain RJP_RS04910 IPR012676 TGS-like RJP_RS04910 IPR013029 Domain of unknown function DUF933 RJP_RS04910 IPR023192 TGS-like domain RJP_RS04910 IPR027417 P-loop containing nucleoside triphosphate hydrolase RJP_RS04920 IPR004812 Drug resistance transporter Bcr/CmlA subfamily RJP_RS04920 IPR005829 Sugar transporter, conserved site RJP_RS04920 IPR011701 Major facilitator superfamily RJP_RS04920 IPR020846 Major facilitator superfamily domain RJP_RS04925 IPR002641 Patatin/Phospholipase A2-related RJP_RS04925 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase RJP_RS04955 IPR001957 Chromosomal replication control, initiator DnaA RJP_RS04955 IPR003593 AAA+ ATPase domain RJP_RS04955 IPR010921 Trp repressor/replication initiator RJP_RS04955 IPR013159 Chromosomal replication initiator, DnaA C-terminal RJP_RS04955 IPR013317 Chromosomal replication control, initiator (DnaA)/regulator (Hda) RJP_RS04955 IPR018312 Chromosomal replication control, initiator DnaA, conserved site RJP_RS04955 IPR020591 Chromosomal replication control, initiator DnaA-like RJP_RS04955 IPR024633 DnaA N-terminal domain RJP_RS04955 IPR027417 P-loop containing nucleoside triphosphate hydrolase RJP_RS04960 IPR001763 Rhodanese-like domain RJP_RS04965 IPR005631 Flavinator of succinate dehydrogenase RJP_RS04970 IPR001650 Helicase, C-terminal RJP_RS04970 IPR003711 CarD-like/TRCF domain RJP_RS04970 IPR004576 Transcription-repair coupling factor RJP_RS04970 IPR005118 Transcription-repair-coupling factor, C-terminal domain RJP_RS04970 IPR011545 DEAD/DEAH box helicase domain RJP_RS04970 IPR014001 Helicase, superfamily 1/2, ATP-binding domain RJP_RS04970 IPR027417 P-loop containing nucleoside triphosphate hydrolase RJP_RS04975 IPR000713 Mur ligase, N-terminal RJP_RS04975 IPR004101 Mur ligase, C-terminal RJP_RS04975 IPR005761 UDP-N-acetylmuramoylalanyl-D-glutamate-2,6-diaminopimelate ligase RJP_RS04975 IPR013221 Mur ligase, central RJP_RS04980 IPR000713 Mur ligase, N-terminal RJP_RS04980 IPR004101 Mur ligase, C-terminal RJP_RS04980 IPR005863 UDP-MurNAc-pentapeptide synthetase RJP_RS04980 IPR013221 Mur ligase, central RJP_RS04985 IPR000715 Glycosyl transferase, family 4 RJP_RS04985 IPR003524 Phospho-N-acetylmuramoyl-pentapeptide transferase RJP_RS04985 IPR018480 Phospho-N-acetylmuramoyl-pentapeptide transferase, conserved site RJP_RS04990 IPR003124 WH2 domain RJP_RS04995 IPR029039 Flavoprotein-like RJP_RS05000 IPR005025 NADPH-dependent FMN reductase-like RJP_RS05000 IPR029039 Flavoprotein-like RJP_RS05005 IPR004165 Coenzyme A transferase family I RJP_RS05005 IPR012791 3-oxoacid CoA-transferase, subunit B RJP_RS05010 IPR004165 Coenzyme A transferase family I RJP_RS05010 IPR012792 3-oxoacid CoA-transferase, subunit A RJP_RS05030 IPR001650 Helicase, C-terminal RJP_RS05030 IPR011545 DEAD/DEAH box helicase domain RJP_RS05030 IPR012340 Nucleic acid-binding, OB-fold RJP_RS05030 IPR014001 Helicase, superfamily 1/2, ATP-binding domain RJP_RS05030 IPR027417 P-loop containing nucleoside triphosphate hydrolase RJP_RS05030 IPR033454 RJP_RS05030 RJP_RS05040 IPR008875 TraX RJP_RS05045 IPR004268 Flagellin assembly, membrane protein MviN RJP_RS05045 IPR005728 Rickettsial palindromic element RJP_RS05050 IPR008162 Inorganic pyrophosphatase RJP_RS05055 IPR004329 CcmE/CycJ protein RJP_RS05055 IPR012340 Nucleic acid-binding, OB-fold RJP_RS05060 IPR003782 Copper chaperone SCO1/SenC RJP_RS05060 IPR012336 Thioredoxin-like fold RJP_RS05065 IPR001036 Acriflavin resistance protein RJP_RS05065 IPR005791 Protein translocase subunit SecD RJP_RS05065 IPR022645 Protein-export membrane protein SecD/SecF, bacterial RJP_RS05065 IPR022646 Protein-export membrane protein SecD/SecF/SecDF, conserved site RJP_RS05065 IPR022813 Protein-export membrane protein SecD/SecF, archaeal and bacterial RJP_RS05070 IPR003849 Preprotein translocase YajC RJP_RS05075 IPR010985 Ribbon-helix-helix RJP_RS05085 IPR020846 Major facilitator superfamily domain RJP_RS05100 IPR002583 Ribosomal protein S20 RJP_RS05105 IPR000456 Ribosomal protein L17 RJP_RS05110 IPR009025 DNA-directed RNA polymerase, RBP11-like dimerisation domain RJP_RS05110 IPR011260 RNA polymerase, alpha subunit, C-terminal RJP_RS05110 IPR011262 DNA-directed RNA polymerase, insert domain RJP_RS05110 IPR011263 DNA-directed RNA polymerase, RpoA/D/Rpb3-type RJP_RS05110 IPR011773 DNA-directed RNA polymerase, alpha subunit RJP_RS05115 IPR001971 Ribosomal protein S11 RJP_RS05115 IPR018102 Ribosomal S11, conserved site RJP_RS05115 IPR019981 Ribosomal protein S11, bacterial-type RJP_RS05120 IPR001892 Ribosomal protein S13 RJP_RS05120 IPR010979 Ribosomal protein S13-like, H2TH RJP_RS05120 IPR018269 Ribosomal protein S13, conserved site RJP_RS05120 IPR019980 Ribosomal protein S13, bacterial-type RJP_RS05120 IPR027437 30s ribosomal protein S13, C-terminal RJP_RS05125 IPR000850 Adenylate kinase/UMP-CMP kinase RJP_RS05125 IPR006259 Adenylate kinase subfamily RJP_RS05125 IPR007862 Adenylate kinase, active site lid domain RJP_RS05125 IPR027417 P-loop containing nucleoside triphosphate hydrolase RJP_RS05130 IPR002208 SecY/SEC61-alpha family RJP_RS05130 IPR023201 SecY subunit domain RJP_RS05130 IPR026593 Protein translocase subunit SecY RJP_RS05130 IPR030659 RJP_RS05130 RJP_RS05135 IPR005749 Ribosomal protein L15, bacterial-type RJP_RS05135 IPR021131 Ribosomal protein L18e/L15P RJP_RS05135 IPR030878 RJP_RS05135 RJP_RS05140 IPR005996 Ribosomal protein L30, bacterial-type RJP_RS05140 IPR016082 Ribosomal protein L30, ferredoxin-like fold domain RJP_RS05145 IPR000851 Ribosomal protein S5 RJP_RS05145 IPR005324 Ribosomal protein S5, C-terminal RJP_RS05145 IPR005712 Ribosomal protein S5, bacterial-type RJP_RS05145 IPR013810 Ribosomal protein S5, N-terminal RJP_RS05145 IPR014720 Double-stranded RNA-binding domain RJP_RS05145 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup RJP_RS05145 IPR018192 Ribosomal protein S5, N-terminal, conserved site RJP_RS05145 IPR020568 Ribosomal protein S5 domain 2-type fold RJP_RS05150 IPR004389 Ribosomal protein L18, bacterial-type RJP_RS05150 IPR005484 Ribosomal protein L18/L5 RJP_RS05155 IPR000702 Ribosomal protein L6 RJP_RS05155 IPR002358 Ribosomal protein L6, conserved site RJP_RS05155 IPR019906 Ribosomal protein L6, bacterial-type RJP_RS05155 IPR020040 Ribosomal protein L6, alpha-beta domain RJP_RS05160 IPR000630 Ribosomal protein S8 RJP_RS05165 IPR001209 Ribosomal protein S14 RJP_RS05165 IPR018271 Ribosomal protein S14, conserved site RJP_RS05165 IPR023036 Ribosomal protein S14, bacterial/plastid RJP_RS05170 IPR002132 Ribosomal protein L5 RJP_RS05170 IPR020929 Ribosomal protein L5, conserved site RJP_RS05170 IPR020930 Ribosomal protein L5, bacterial-type RJP_RS05170 IPR022803 Ribosomal protein L5 domain RJP_RS05170 IPR031309 RJP_RS05170 RJP_RS05170 IPR031310 RJP_RS05170 RJP_RS05175 IPR003256 Ribosomal protein L24 RJP_RS05175 IPR005824 KOW RJP_RS05175 IPR005825 Ribosomal protein L24/L26, conserved site RJP_RS05175 IPR008991 Translation protein SH3-like domain RJP_RS05175 IPR014722 Ribosomal protein L2 domain 2 RJP_RS05180 IPR000218 Ribosomal protein L14b/L23e RJP_RS05180 IPR005745 Ribosomal protein L14, bacterial-type RJP_RS05180 IPR019972 Ribosomal protein L14 conserved site RJP_RS05185 IPR000266 Ribosomal protein S17 RJP_RS05185 IPR012340 Nucleic acid-binding, OB-fold RJP_RS05185 IPR019979 Ribosomal protein S17, conserved site RJP_RS05185 IPR019984 Ribosomal protein S17, bacterial-type RJP_RS05190 IPR001854 Ribosomal protein L29 RJP_RS05190 IPR018254 Ribosomal protein L29, conserved site RJP_RS05195 IPR000114 Ribosomal protein L16 RJP_RS05195 IPR016180 Ribosomal protein L10e/L16 RJP_RS05195 IPR020798 Ribosomal protein L16, conserved site RJP_RS05200 IPR001351 Ribosomal protein S3, C-terminal RJP_RS05200 IPR004044 K Homology domain, type 2 RJP_RS05200 IPR004087 K Homology domain RJP_RS05200 IPR005704 Ribosomal protein S3, bacterial RJP_RS05200 IPR009019 K homology domain, prokaryotic type RJP_RS05200 IPR015946 K homology domain-like, alpha/beta RJP_RS05200 IPR018280 Ribosomal protein S3, conserved site RJP_RS05205 IPR001063 Ribosomal protein L22/L17 RJP_RS05205 IPR005727 Ribosomal protein L22, bacterial/chloroplast-type RJP_RS05205 IPR018260 Ribosomal protein L22/L17, conserved site RJP_RS05210 IPR002222 Ribosomal protein S19/S15 RJP_RS05210 IPR005732 Ribosomal protein S19, bacterial-type RJP_RS05210 IPR020934 Ribosomal protein S19 conserved site RJP_RS05210 IPR023575 Ribosomal protein S19, superfamily RJP_RS05215 IPR002171 Ribosomal protein L2 RJP_RS05215 IPR005880 Ribosomal protein L2, bacterial/organellar-type RJP_RS05215 IPR008991 Translation protein SH3-like domain RJP_RS05215 IPR012340 Nucleic acid-binding, OB-fold RJP_RS05215 IPR014722 Ribosomal protein L2 domain 2 RJP_RS05215 IPR014726 Ribosomal protein L2, domain 3 RJP_RS05215 IPR022666 Ribosomal Proteins L2, RNA binding domain RJP_RS05215 IPR022669 Ribosomal protein L2, C-terminal RJP_RS05215 IPR022671 Ribosomal protein L2, conserved site RJP_RS05220 IPR012677 Nucleotide-binding, alpha-beta plait RJP_RS05220 IPR012678 Ribosomal protein L23/L15e core domain RJP_RS05220 IPR013025 Ribosomal protein L25/L23 RJP_RS05225 IPR002136 Ribosomal protein L4/L1e RJP_RS05225 IPR013005 Ribosomal protein L4/L1e, bacterial-type RJP_RS05225 IPR023574 Ribosomal protein L4 domain RJP_RS05230 IPR000597 Ribosomal protein L3 RJP_RS05230 IPR009000 Translation protein, beta-barrel domain RJP_RS05230 IPR019926 Ribosomal protein L3, conserved site RJP_RS05230 IPR019927 Ribosomal protein L3, bacterial/organelle-type RJP_RS05235 IPR001848 Ribosomal protein S10 RJP_RS05235 IPR027486 Ribosomal protein S10 domain RJP_RS05240 IPR000795 Elongation factor, GTP-binding domain RJP_RS05240 IPR004160 Translation elongation factor EFTu/EF1A, C-terminal RJP_RS05240 IPR004161 Translation elongation factor EFTu/EF1A, domain 2 RJP_RS05240 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle RJP_RS05240 IPR005225 Small GTP-binding protein domain RJP_RS05240 IPR009000 Translation protein, beta-barrel domain RJP_RS05240 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal RJP_RS05240 IPR027417 P-loop containing nucleoside triphosphate hydrolase RJP_RS05240 IPR031157 RJP_RS05240 RJP_RS05255 IPR001537 tRNA/rRNA methyltransferase, SpoU type RJP_RS05255 IPR004441 RNA methyltransferase TrmH family RJP_RS05255 IPR013123 RNA 2-O ribose methyltransferase, substrate binding RJP_RS05255 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal RJP_RS05255 IPR029028 Alpha/beta knot methyltransferases RJP_RS05255 IPR029064 50S ribosomal protein L30e-like RJP_RS05265 IPR000362 Fumarate lyase family RJP_RS05265 IPR005677 Fumarate hydratase, class II RJP_RS05265 IPR008948 L-Aspartase-like RJP_RS05265 IPR018951 Fumarase C, C-terminal RJP_RS05265 IPR020557 Fumarate lyase, conserved site RJP_RS05265 IPR022761 Fumarate lyase, N-terminal RJP_RS05265 IPR024083 Fumarase/histidase, N-terminal RJP_RS05270 IPR006442 Type II toxin-antitoxin system, antitoxin Phd/YefM RJP_RS05275 IPR000158 Cell division protein FtsZ RJP_RS05275 IPR003008 Tubulin/FtsZ, GTPase domain RJP_RS05275 IPR008280 Tubulin/FtsZ, C-terminal RJP_RS05275 IPR018316 Tubulin/FtsZ, 2-layer sandwich domain RJP_RS05275 IPR020805 Cell division protein FtsZ, conserved site RJP_RS05275 IPR024757 Cell division protein FtsZ, C-terminal RJP_RS05295 IPR001075 NIF system FeS cluster assembly, NifU, C-terminal RJP_RS05295 IPR014824 Scaffold protein Nfu/NifU, N-terminal RJP_RS05295 IPR017065 HIRA-interacting protein 5 RJP_RS05300 IPR011701 Major facilitator superfamily RJP_RS05300 IPR020846 Major facilitator superfamily domain RJP_RS05305 IPR001650 Helicase, C-terminal RJP_RS05305 IPR011545 DEAD/DEAH box helicase domain RJP_RS05305 IPR014001 Helicase, superfamily 1/2, ATP-binding domain RJP_RS05305 IPR027417 P-loop containing nucleoside triphosphate hydrolase RJP_RS05310 IPR002059 Cold-shock protein, DNA-binding RJP_RS05310 IPR011129 Cold shock protein RJP_RS05310 IPR012156 Cold shock, CspA RJP_RS05310 IPR012340 Nucleic acid-binding, OB-fold RJP_RS05310 IPR019844 Cold-shock conserved site RJP_RS05320 IPR001737 Ribosomal RNA adenine methylase transferase RJP_RS05320 IPR011530 Ribosomal RNA adenine dimethylase RJP_RS05320 IPR020596 Ribosomal RNA adenine methylase transferase, conserved site RJP_RS05320 IPR020598 Ribosomal RNA adenine methylase transferase, N-terminal RJP_RS05320 IPR022436 Rickettsia palindromic element RPE2 RJP_RS05320 IPR023165 rRNA adenine dimethylase-like RJP_RS05320 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like RJP_RS05325 IPR027304 Trigger factor/SurA domain RJP_RS05330 IPR007543 Organic solvent tolerance protein, C-terminal RJP_RS05330 IPR020889 Lipopolysaccharide assembly, LptD RJP_RS05335 IPR003753 Exonuclease VII, large subunit RJP_RS05335 IPR020579 Exonuclease VII, large subunit, C-terminal RJP_RS05335 IPR025824 OB-fold nucleic acid binding domain RJP_RS05345 IPR004808 AP endonuclease 1 RJP_RS05345 IPR005135 Endonuclease/exonuclease/phosphatase RJP_RS05345 IPR020847 AP endonuclease 1, binding site RJP_RS05350 IPR004316 RJP_RS05350 RJP_RS05355 IPR005225 Small GTP-binding protein domain RJP_RS05355 IPR006073 GTP binding domain RJP_RS05355 IPR015946 K homology domain-like, alpha/beta RJP_RS05355 IPR016484 GTP-binding protein EngA RJP_RS05355 IPR027417 P-loop containing nucleoside triphosphate hydrolase RJP_RS05355 IPR032859 RJP_RS05355 RJP_RS05390 IPR004147 UbiB domain RJP_RS05390 IPR010232 Probable protein kinase UbiB RJP_RS05390 IPR011009 Protein kinase-like domain RJP_RS05395 IPR004033 UbiE/COQ5 methyltransferase RJP_RS05395 IPR023576 UbiE/COQ5 methyltransferase, conserved site RJP_RS05395 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like RJP_RS05400 IPR010663 Zinc finger, DNA glycosylase/AP lyase/isoleucyl tRNA synthetase RJP_RS05400 IPR010979 Ribosomal protein S13-like, H2TH RJP_RS05400 IPR012319 DNA glycosylase/AP lyase, catalytic domain RJP_RS05400 IPR015886 DNA glycosylase/AP lyase, H2TH DNA-binding RJP_RS05400 IPR015887 DNA glycosylase/AP lyase, zinc finger domain, DNA-binding site RJP_RS05400 IPR020629 Formamidopyrimidine-DNA glycosylase RJP_RS05405 IPR005728 Rickettsial palindromic element RJP_RS05405 IPR005835 Nucleotidyl transferase RJP_RS05405 IPR022438 Rickettsia palindromic element RPE5 RJP_RS05405 IPR029044 Nucleotide-diphospho-sugar transferases RJP_RS05410 IPR029044 Nucleotide-diphospho-sugar transferases RJP_RS05415 IPR029044 Nucleotide-diphospho-sugar transferases RJP_RS05440 IPR001130 TatD family RJP_RS05440 IPR015991 Uncharacterised deoxyribonuclease TatD-type RJP_RS05440 IPR018228 Deoxyribonuclease, TatD-related, conserved site RJP_RS05440 IPR022439 Rickettsia palindromic element RPE4 RJP_RS05440 IPR032466 RJP_RS05440 RJP_RS05445 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding RJP_RS05445 IPR013155 Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding RJP_RS05445 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold RJP_RS05445 IPR014758 Methionyl-tRNA synthetase RJP_RS05445 IPR015413 Methionyl/Leucyl tRNA synthetase RJP_RS05445 IPR023457 Methionine-tRNA synthetase, type 2 RJP_RS05450 IPR018094 Thymidylate kinase RJP_RS05450 IPR018095 Thymidylate kinase, conserved site RJP_RS05450 IPR027417 P-loop containing nucleoside triphosphate hydrolase RJP_RS05455 IPR020846 Major facilitator superfamily domain RJP_RS05460 IPR000537 UbiA prenyltransferase family RJP_RS05460 IPR006370 4-hydroxybenzoate polyprenyl transferase RJP_RS05460 IPR030470 RJP_RS05460 RJP_RS05465 IPR006842 Transposase (putative), YhgA-like RJP_RS05470 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site RJP_RS05470 IPR002300 Aminoacyl-tRNA synthetase, class Ia RJP_RS05470 IPR002303 Valine-tRNA ligase RJP_RS05470 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain RJP_RS05470 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding RJP_RS05470 IPR013155 Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding RJP_RS05470 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold RJP_RS05470 IPR022874 Valine-tRNA ligase, type 2 RJP_RS05475 IPR007074 LicD RJP_RS05480 IPR025420 Domain of unknown function DUF4143 RJP_RS05480 IPR027417 P-loop containing nucleoside triphosphate hydrolase RJP_RS05485 IPR003798 DNA recombination RmuC RJP_RS05530 IPR025695 DoxX family RJP_RS05540 IPR003593 AAA+ ATPase domain RJP_RS05540 IPR003959 ATPase, AAA-type, core RJP_RS05540 IPR004487 Clp protease, ATP-binding subunit ClpX RJP_RS05540 IPR010603 Zinc finger, ClpX C4-type RJP_RS05540 IPR019489 Clp ATPase, C-terminal RJP_RS05540 IPR027417 P-loop containing nucleoside triphosphate hydrolase RJP_RS05545 IPR000182 GNAT domain RJP_RS05545 IPR016181 Acyl-CoA N-acyltransferase RJP_RS05550 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold RJP_RS05550 IPR018317 Queuosine biosynthesis protein QueC RJP_RS05555 IPR008651 Uncharacterised protein family HicB RJP_RS05555 IPR010985 Ribbon-helix-helix RJP_RS05565 IPR003439 ABC transporter-like RJP_RS05565 IPR003593 AAA+ ATPase domain RJP_RS05565 IPR011527 ABC transporter type 1, transmembrane domain RJP_RS05565 IPR017871 ABC transporter, conserved site RJP_RS05565 IPR027417 P-loop containing nucleoside triphosphate hydrolase RJP_RS05570 IPR024247 Protein of unknown function DUF2673 RJP_RS05575 IPR011701 Major facilitator superfamily RJP_RS05575 IPR020846 Major facilitator superfamily domain RJP_RS05580 IPR003838 Permease FtsX-like RJP_RS05580 IPR011925 Lipoprotein releasing system, transmembrane protein, LolC/E family RJP_RS05580 IPR025857 MacB-like periplasmic core domain RJP_RS05585 IPR003439 ABC transporter-like RJP_RS05585 IPR003593 AAA+ ATPase domain RJP_RS05585 IPR017871 ABC transporter, conserved site RJP_RS05585 IPR027417 P-loop containing nucleoside triphosphate hydrolase RJP_RS05590 IPR003653 Peptidase C48, SUMO/Sentrin/Ubl1 RJP_RS05595 IPR000644 CBS domain RJP_RS05595 IPR002550 Domain of unknown function DUF21 RJP_RS05595 IPR005170 Transporter-associated domain RJP_RS05595 IPR016166 FAD-binding, type 2 RJP_RS05595 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 RJP_RS05600 IPR002541 Cytochrome c assembly protein RJP_RS05600 IPR003567 Cytochrome c-type biogenesis protein RJP_RS05600 IPR032523 RJP_RS05600 RJP_RS05625 IPR005546 Autotransporter beta-domain RJP_RS05625 IPR006315 Outer membrane autotransporter barrel RJP_RS05625 IPR022095 Rickettsia outer membrane protein B RJP_RS05630 IPR007685 RelA/SpoT RJP_RS05635 IPR001764 Glycoside hydrolase, family 3, N-terminal RJP_RS05635 IPR017853 Glycoside hydrolase, superfamily RJP_RS05640 IPR000551 MerR-type HTH domain RJP_RS05640 IPR009061 DNA binding domain, putative RJP_RS05645 IPR000119 Histone-like bacterial DNA-binding protein RJP_RS05645 IPR010992 Integration host factor (IHF)-like DNA-binding domain RJP_RS05655 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant RJP_RS05655 IPR012336 Thioredoxin-like fold RJP_RS05655 IPR024706 Peroxiredoxin, AhpC-type RJP_RS05660 IPR004960 Bacterial lipid A biosynthesis acyltransferase RJP_RS05665 IPR003758 Tetraacyldisaccharide 4'-kinase RJP_RS05665 IPR027417 P-loop containing nucleoside triphosphate hydrolase RJP_RS05670 IPR011055 Duplicated hybrid motif RJP_RS05670 IPR016047 Peptidase M23 RJP_RS05680 IPR001357 BRCT domain RJP_RS05680 IPR001679 NAD-dependent DNA ligase RJP_RS05680 IPR004150 NAD-dependent DNA ligase, OB-fold RJP_RS05680 IPR010994 RuvA domain 2-like RJP_RS05680 IPR012340 Nucleic acid-binding, OB-fold RJP_RS05680 IPR013839 NAD-dependent DNA ligase, adenylation RJP_RS05680 IPR013840 NAD-dependent DNA ligase, N-terminal RJP_RS05680 IPR018239 NAD-dependent DNA ligase, active site RJP_RS05680 IPR033136 RJP_RS05680 RJP_RS05685 IPR002616 tRNA-guanine(15) transglycosylase-like RJP_RS05685 IPR004803 Queuine tRNA-ribosyltransferase RJP_RS05715 IPR003399 Mammalian cell entry-related RJP_RS05715 IPR030970 RJP_RS05715 RJP_RS05720 IPR007763 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 12 RJP_RS05725 IPR002156 Ribonuclease H domain RJP_RS05725 IPR012337 Ribonuclease H-like domain RJP_RS05725 IPR022892 Ribonuclease H RJP_RS05730 IPR007481 Stringent starvation protein B RJP_RS05735 IPR010415 Protein of unknown function DUF1009 RJP_RS05740 IPR001977 Dephospho-CoA kinase RJP_RS05740 IPR027417 P-loop containing nucleoside triphosphate hydrolase RJP_RS05745 IPR006054 DNA polymerase III, epsilon subunit RJP_RS05745 IPR006309 DNA polymerase 3, epsilon subunit RJP_RS05745 IPR012337 Ribonuclease H-like domain RJP_RS05745 IPR013520 Exonuclease, RNase T/DNA polymerase III RJP_RS05750 IPR002994 Surfeit locus 1/Shy1 RJP_RS05755 IPR000212 DNA helicase, UvrD/REP type RJP_RS05755 IPR014016 UvrD-like Helicase, ATP-binding domain RJP_RS05755 IPR014017 DNA helicase, UvrD-like, C-terminal RJP_RS05755 IPR027417 P-loop containing nucleoside triphosphate hydrolase RJP_RS05770 IPR001227 Acyl transferase domain RJP_RS05770 IPR004410 Malonyl CoA-acyl carrier protein transacylase, FabD-type RJP_RS05770 IPR014043 Acyl transferase RJP_RS05770 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase RJP_RS05770 IPR016036 Malonyl-CoA ACP transacylase, ACP-binding RJP_RS05770 IPR020801 Polyketide synthase, acyl transferase domain RJP_RS05770 IPR024925 Malonyl CoA-acyl carrier protein transacylase RJP_RS05810 IPR027417 P-loop containing nucleoside triphosphate hydrolase RJP_RS05825 IPR002155 Thiolase RJP_RS05825 IPR016039 Thiolase-like RJP_RS05825 IPR020610 Thiolase, active site RJP_RS05825 IPR020613 Thiolase, conserved site RJP_RS05825 IPR020615 Thiolase, acyl-enzyme intermediate active site RJP_RS05825 IPR020616 Thiolase, N-terminal RJP_RS05825 IPR020617 Thiolase, C-terminal RJP_RS05835 IPR004667 ADP/ATP carrier protein RJP_RS05845 IPR000086 NUDIX hydrolase domain RJP_RS05845 IPR015797 NUDIX hydrolase domain-like RJP_RS05855 IPR000644 CBS domain RJP_RS05855 IPR005170 Transporter-associated domain RJP_RS05855 IPR016166 FAD-binding, type 2 RJP_RS05855 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 RJP_RS05860 IPR002036 Endoribonuclease YbeY RJP_RS05860 IPR020549 Endoribonuclease YbeY, conserved site RJP_RS05860 IPR023091 Metalloprotease catalytic domain, predicted RJP_RS05865 IPR003477 mRNA interferase PemK-like protein RJP_RS05865 IPR011067 Plasmid maintenance toxin/Cell growth inhibitor RJP_RS05870 IPR003698 Lipoyl synthase RJP_RS05870 IPR006638 Elongator protein 3/MiaB/NifB RJP_RS05870 IPR007197 Radical SAM RJP_RS05870 IPR013785 Aldolase-type TIM barrel RJP_RS05870 IPR031691 RJP_RS05870 RJP_RS05875 IPR001085 Serine hydroxymethyltransferase RJP_RS05875 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 RJP_RS05875 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 RJP_RS05875 IPR015424 Pyridoxal phosphate-dependent transferase RJP_RS05875 IPR019798 Serine hydroxymethyltransferase, pyridoxal phosphate binding site RJP_RS05880 IPR003140 Phospholipase/carboxylesterase/thioesterase RJP_RS05880 IPR029058 Alpha/Beta hydrolase fold RJP_RS05885 IPR002109 Glutaredoxin RJP_RS05885 IPR004480 Monothiol glutaredoxin-related RJP_RS05885 IPR012336 Thioredoxin-like fold RJP_RS05885 IPR014434 Monothiol glutaredoxin RJP_RS05890 IPR000445 Helix-hairpin-helix motif RJP_RS05890 IPR003265 HhH-GPD domain RJP_RS05890 IPR003651 Endonuclease III-like, iron-sulphur cluster loop motif RJP_RS05890 IPR004036 Endonuclease III-like, conserved site-2 RJP_RS05890 IPR005759 Endonuclease III RJP_RS05890 IPR011257 DNA glycosylase RJP_RS05890 IPR023170 Helix-turn-helix, base-excision DNA repair, C-terminal RJP_RS05910 IPR012556 Entericidin EcnAB RJP_RS05915 IPR010106 Conserved hypothetical protein CHP01784 RJP_RS05925 IPR000878 Tetrapyrrole methylase RJP_RS05925 IPR008189 rRNA small subunit methyltransferase I RJP_RS05925 IPR014776 Tetrapyrrole methylase, subdomain 2 RJP_RS05925 IPR014777 Tetrapyrrole methylase, subdomain 1 RJP_RS05925 IPR018063 SAM-dependent methyltransferase RsmI, conserved site RJP_RS05930 IPR028081 Leucine-binding protein domain RJP_RS05930 IPR028082 Periplasmic binding protein-like I RJP_RS05935 IPR003369 Sec-independent protein translocase protein TatA/B/E RJP_RS05935 IPR006312 Sec-independent protein translocase protein TatA/E RJP_RS05940 IPR007686 YutG/PgpA domain RJP_RS05940 IPR026037 Phosphatidylglycerophosphatase A RJP_RS05940 IPR027416 YutG-like domain RJP_RS05945 IPR001787 Ribosomal protein L21 RJP_RS05945 IPR018258 Ribosomal protein L21, conserved site RJP_RS05945 IPR028909 Ribosomal protein L21-like RJP_RS05950 IPR001684 Ribosomal protein L27 RJP_RS05950 IPR018261 Ribosomal protein L27, conserved site RJP_RS05955 IPR001048 Aspartate/glutamate/uridylate kinase RJP_RS05955 IPR001057 Glutamate/acetylglutamate kinase RJP_RS05955 IPR001341 Aspartate kinase domain RJP_RS05955 IPR005260 Aspartate kinase, monofunctional class RJP_RS05955 IPR018042 Aspartate kinase, conserved site RJP_RS05960 IPR001387 Cro/C1-type helix-turn-helix domain RJP_RS05960 IPR010982 Lambda repressor-like, DNA-binding domain RJP_RS05965 IPR022437 Rickettsia palindromic element RPE3 RJP_RS05970 IPR001279 Beta-lactamase-like RJP_RS05985 IPR005829 Sugar transporter, conserved site RJP_RS05985 IPR011701 Major facilitator superfamily RJP_RS05985 IPR020846 Major facilitator superfamily domain RJP_RS05990 IPR007838 Cell division protein ZapA-like RJP_RS05995 IPR005728 Rickettsial palindromic element RJP_RS06000 IPR010982 Lambda repressor-like, DNA-binding domain RJP_RS06005 IPR007780 Bacterial NAD-glutamate dehydrogenase RJP_RS06005 IPR016040 NAD(P)-binding domain RJP_RS06005 IPR028971 NAD-glutamate dehydrogenase RJP_RS06010 IPR004520 tRNA modification GTPase MnmE RJP_RS06010 IPR005225 Small GTP-binding protein domain RJP_RS06010 IPR006073 GTP binding domain RJP_RS06010 IPR018948 GTP-binding protein TrmE, N-terminal RJP_RS06010 IPR025867 tRNA modification GTPase MnmE C-terminal domain RJP_RS06010 IPR027266 GTP-binding protein TrmE/Glycine cleavage system T protein, domain 1 RJP_RS06010 IPR027368 tRNA modification GTPase MnmE domain 2 RJP_RS06010 IPR027417 P-loop containing nucleoside triphosphate hydrolase RJP_RS06015 IPR020182 Uncharacterised protein family RP760 RJP_RS06025 IPR020846 Major facilitator superfamily domain RJP_RS06040 IPR005829 Sugar transporter, conserved site RJP_RS06040 IPR011701 Major facilitator superfamily RJP_RS06040 IPR020846 Major facilitator superfamily domain RJP_RS06045 IPR003593 AAA+ ATPase domain RJP_RS06045 IPR013765 DNA recombination and repair protein RecA RJP_RS06045 IPR020584 DNA recombination/repair protein RecA, conserved site RJP_RS06045 IPR023400 DNA recombination and repair protein RecA, C-terminal RJP_RS06045 IPR027417 P-loop containing nucleoside triphosphate hydrolase RJP_RS06050 IPR002347 Glucose/ribitol dehydrogenase RJP_RS06050 IPR011284 3-oxoacyl-(acyl-carrier-protein) reductase RJP_RS06050 IPR016040 NAD(P)-binding domain RJP_RS06050 IPR020904 Short-chain dehydrogenase/reductase, conserved site RJP_RS06055 IPR003231 Acyl carrier protein (ACP) RJP_RS06055 IPR009081 Acyl carrier protein-like RJP_RS06060 IPR014030 Beta-ketoacyl synthase, N-terminal RJP_RS06060 IPR014031 Beta-ketoacyl synthase, C-terminal RJP_RS06060 IPR016039 Thiolase-like RJP_RS06060 IPR017568 3-oxoacyl-[acyl-carrier-protein] synthase 2 RJP_RS06060 IPR018201 Beta-ketoacyl synthase, active site RJP_RS06060 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain RJP_RS06065 IPR003439 ABC transporter-like RJP_RS06065 IPR003593 AAA+ ATPase domain RJP_RS06065 IPR017871 ABC transporter, conserved site RJP_RS06065 IPR027417 P-loop containing nucleoside triphosphate hydrolase RJP_RS06065 IPR032524 RJP_RS06065 RJP_RS06080 IPR025420 Domain of unknown function DUF4143 RJP_RS06080 IPR027417 P-loop containing nucleoside triphosphate hydrolase RJP_RS06085 IPR005728 Rickettsial palindromic element RJP_RS06085 IPR008145 Guanylate kinase/L-type calcium channel beta subunit RJP_RS06085 IPR017665 Guanylate kinase RJP_RS06085 IPR020590 Guanylate kinase, conserved site RJP_RS06085 IPR027417 P-loop containing nucleoside triphosphate hydrolase RJP_RS06090 IPR001387 Cro/C1-type helix-turn-helix domain RJP_RS06090 IPR010982 Lambda repressor-like, DNA-binding domain RJP_RS06095 IPR007221 Rod shape-determining protein MreC RJP_RS06100 IPR004753 Cell shape determining protein MreB/Mrl RJP_RS06105 IPR005495 Permease YjgP/YjgQ, predicted RJP_RS06115 IPR006664 Outer membrane protein, bacterial RJP_RS06115 IPR006665 Outer membrane protein, OmpA/MotB, C-terminal RJP_RS06115 IPR014169 Peptidoglycan-associated lipoprotein RJP_RS06120 IPR005728 Rickettsial palindromic element RJP_RS06125 IPR004655 3-oxoacyl-[acyl-carrier-protein] synthase 3 RJP_RS06125 IPR013747 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C-terminal RJP_RS06125 IPR013751 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III RJP_RS06125 IPR016039 Thiolase-like RJP_RS06130 IPR002677 Ribosomal protein L32p RJP_RS06130 IPR011332 Zinc-binding ribosomal protein RJP_RS06135 IPR007450 Lipoprotein SmpA/OmlA RJP_RS06140 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain RJP_RS06140 IPR003593 AAA+ ATPase domain RJP_RS06140 IPR004390 Signal-recognition particle receptor FtsY RJP_RS06140 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle RJP_RS06140 IPR027417 P-loop containing nucleoside triphosphate hydrolase RJP_RS06145 IPR001098 DNA-directed DNA polymerase, family A, palm domain RJP_RS06145 IPR002298 DNA polymerase A RJP_RS06145 IPR002421 5'-3' exonuclease, N-terminal RJP_RS06145 IPR008918 Helix-hairpin-helix motif, class 2 RJP_RS06145 IPR012337 Ribonuclease H-like domain RJP_RS06145 IPR018320 DNA polymerase 1 RJP_RS06145 IPR019760 DNA-directed DNA polymerase, family A, conserved site RJP_RS06145 IPR020045 5'-3' exonuclease, C-terminal domain RJP_RS06145 IPR020046 5'-3' exonuclease, alpha-helical arch, N-terminal RJP_RS06145 IPR029060 PIN domain-like RJP_RS06150 IPR002133 S-adenosylmethionine synthetase RJP_RS06150 IPR022628 S-adenosylmethionine synthetase, N-terminal RJP_RS06150 IPR022636 S-adenosylmethionine synthetase superfamily RJP_RS06155 IPR002133 S-adenosylmethionine synthetase RJP_RS06155 IPR022628 S-adenosylmethionine synthetase, N-terminal RJP_RS06155 IPR022629 S-adenosylmethionine synthetase, central domain RJP_RS06155 IPR022630 S-adenosylmethionine synthetase, C-terminal RJP_RS06155 IPR022631 S-adenosylmethionine synthetase, conserved site RJP_RS06155 IPR022636 S-adenosylmethionine synthetase superfamily RJP_RS06180 IPR003141 Polymerase/histidinol phosphatase, N-terminal RJP_RS06180 IPR004013 PHP, C-terminal RJP_RS06180 IPR004805 DNA polymerase III, alpha subunit RJP_RS06180 IPR011708 Bacterial DNA polymerase III, alpha subunit RJP_RS06180 IPR012340 Nucleic acid-binding, OB-fold RJP_RS06180 IPR016195 Polymerase/histidinol phosphatase-like RJP_RS06180 IPR029460 DNA polymerase, helix-hairpin-helix motif RJP_RS06185 IPR001732 UDP-glucose/GDP-mannose dehydrogenase, N-terminal RJP_RS06185 IPR008927 6-phosphogluconate dehydrogenase, C-terminal-like RJP_RS06185 IPR014026 UDP-glucose/GDP-mannose dehydrogenase, dimerisation RJP_RS06185 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal RJP_RS06185 IPR016040 NAD(P)-binding domain RJP_RS06185 IPR017476 UDP-glucose/GDP-mannose dehydrogenase RJP_RS06185 IPR028357 UDP-glucose 6-dehydrogenase, bacterial type RJP_RS06190 IPR025263 Domain of unknown function DUF3971 RJP_RS06190 IPR032712 RJP_RS06190 RJP_RS06195 IPR011701 Major facilitator superfamily RJP_RS06195 IPR020846 Major facilitator superfamily domain RJP_RS06200 IPR002033 Sec-independent periplasmic protein translocase TatC RJP_RS06200 IPR019820 Sec-independent periplasmic protein translocase, conserved site RJP_RS06205 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ H/ P/ S), conserved domain RJP_RS06205 IPR002317 Serine-tRNA ligase, type1 RJP_RS06205 IPR010978 tRNA-binding arm RJP_RS06205 IPR015866 Serine-tRNA synthetase, type1, N-terminal RJP_RS06210 IPR004346 CagE, TrbE, VirB component of type IV transporter system RJP_RS06210 IPR018145 CagE, TrbE, VirB component of type IV transporter system, central domain RJP_RS06210 IPR027417 P-loop containing nucleoside triphosphate hydrolase RJP_RS06220 IPR005496 Integral membrane protein TerC RJP_RS06220 IPR022369 Integral membrane protein TerC, riboswitch-linked RJP_RS06225 IPR011250 Outer membrane protein/outer membrane enzyme PagP , beta-barrel RJP_RS06230 IPR018773 Methyltransferase regulatory domain, predicted RJP_RS06230 IPR025714 Methyltransferase domain RJP_RS06230 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like RJP_RS06240 IPR001387 Cro/C1-type helix-turn-helix domain RJP_RS06240 IPR010982 Lambda repressor-like, DNA-binding domain RJP_RS06245 IPR001457 NADH:ubiquinone/plastoquinone oxidoreductase, chain 6 RJP_RS06250 IPR001133 NADH-ubiquinone oxidoreductase chain 4L/K RJP_RS06255 IPR001516 NADH:ubiquinone oxidoreductase, chain 5/L, N-terminal RJP_RS06255 IPR001750 NADH:ubiquinone/plastoquinone oxidoreductase RJP_RS06255 IPR003945 NADH-plastoquinone oxidoreductase, chain 5 RJP_RS06255 IPR018393 NADH-plastoquinone oxidoreductase, chain 5 subgroup RJP_RS06260 IPR001750 NADH:ubiquinone/plastoquinone oxidoreductase RJP_RS06260 IPR003918 NADH:ubiquinone oxidoreductase RJP_RS06260 IPR010227 NADH-quinone oxidoreductase, chain M/4 RJP_RS06265 IPR003439 ABC transporter-like RJP_RS06265 IPR003593 AAA+ ATPase domain RJP_RS06265 IPR005895 ABC transporter, haem export, CcmA RJP_RS06265 IPR027417 P-loop containing nucleoside triphosphate hydrolase RJP_RS06270 IPR010226 NADH-quinone oxidoreductase, chain I RJP_RS06270 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain RJP_RS06270 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site RJP_RS06275 IPR001694 NADH:ubiquinone oxidoreductase, subunit 1/F420H2 oxidoreductase subunit H RJP_RS06275 IPR018086 NADH:ubiquinone oxidoreductase, subunit 1, conserved site RJP_RS06280 IPR000283 NADH:ubiquinone oxidoreductase, 75kDa subunit, conserved site RJP_RS06280 IPR001041 2Fe-2S ferredoxin-type domain RJP_RS06280 IPR006656 Molybdopterin oxidoreductase RJP_RS06280 IPR010228 NADH:ubiquinone oxidoreductase, subunit G RJP_RS06280 IPR012675 Beta-grasp domain RJP_RS06280 IPR015405 NADH-quinone oxidoreductase, chain G, C-terminal RJP_RS06280 IPR019574 NADH:ubiquinone oxidoreductase, subunit G, iron-sulphur binding RJP_RS06290 IPR000573 Aconitase A/isopropylmalate dehydratase small subunit, swivel RJP_RS06290 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha RJP_RS06290 IPR006249 Aconitate/iron regulatory protein 2 RJP_RS06290 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel RJP_RS06290 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 RJP_RS06290 IPR015932 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 2 RJP_RS06290 IPR015937 Aconitase/isopropylmalate dehydratase RJP_RS06290 IPR018136 Aconitase family, 4Fe-4S cluster binding site RJP_RS06295 IPR001469 ATPase, F1 complex, delta/epsilon subunit RJP_RS06295 IPR020546 ATPase, F1 complex, delta/epsilon subunit, N-terminal RJP_RS06300 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain RJP_RS06300 IPR000793 ATPase, F1/V1/A1 complex, alpha/beta subunit, C-terminal RJP_RS06300 IPR003593 AAA+ ATPase domain RJP_RS06300 IPR004100 ATPase, F1 complex alpha/beta subunit, N-terminal domain RJP_RS06300 IPR005722 ATPase, F1 complex, beta subunit RJP_RS06300 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site RJP_RS06300 IPR024034 ATPase, F1 complex beta subunit/V1 complex, C-terminal RJP_RS06300 IPR027417 P-loop containing nucleoside triphosphate hydrolase RJP_RS06305 IPR000131 ATPase, F1 complex, gamma subunit RJP_RS06305 IPR022436 Rickettsia palindromic element RPE2 RJP_RS06305 IPR023633 ATPase, F1 complex, gamma subunit domain RJP_RS06310 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain RJP_RS06310 IPR000793 ATPase, F1/V1/A1 complex, alpha/beta subunit, C-terminal RJP_RS06310 IPR004100 ATPase, F1 complex alpha/beta subunit, N-terminal domain RJP_RS06310 IPR005294 ATPase, F1 complex, alpha subunit RJP_RS06310 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site RJP_RS06310 IPR023366 ATP synthase subunit alpha-like domain RJP_RS06310 IPR027417 P-loop containing nucleoside triphosphate hydrolase RJP_RS06315 IPR000711 ATPase, OSCP/delta subunit RJP_RS06315 IPR026015 F1F0 ATP synthase OSCP/delta subunit, N-terminal domain RJP_RS06320 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain RJP_RS06320 IPR006258 Dihydrolipoamide dehydrogenase RJP_RS06320 IPR012999 Pyridine nucleotide-disulphide oxidoreductase, class I, active site RJP_RS06320 IPR016156 FAD/NAD-linked reductase, dimerisation domain RJP_RS06320 IPR023753 Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain RJP_RS06335 IPR001460 Penicillin-binding protein, transpeptidase RJP_RS06335 IPR012338 Beta-lactamase/transpeptidase-like RJP_RS06340 IPR001460 Penicillin-binding protein, transpeptidase RJP_RS06340 IPR002137 Beta-lactamase, class-D active site RJP_RS06340 IPR012338 Beta-lactamase/transpeptidase-like RJP_RS06345 IPR001264 Glycosyl transferase, family 51 RJP_RS06345 IPR001460 Penicillin-binding protein, transpeptidase RJP_RS06345 IPR012338 Beta-lactamase/transpeptidase-like RJP_RS06345 IPR012340 Nucleic acid-binding, OB-fold RJP_RS06345 IPR023346 Lysozyme-like domain RJP_RS06345 IPR031376 RJP_RS06345 RJP_RS06350 IPR002792 TRAM domain RJP_RS06350 IPR005839 Methylthiotransferase RJP_RS06350 IPR006463 tRNA-i(6)A37 modification enzyme MiaB RJP_RS06350 IPR006638 Elongator protein 3/MiaB/NifB RJP_RS06350 IPR007197 Radical SAM RJP_RS06350 IPR013848 Methylthiotransferase, N-terminal RJP_RS06350 IPR020612 Methylthiotransferase, conserved site RJP_RS06350 IPR023404 Radical SAM, alpha/beta horseshoe RJP_RS06350 IPR023970 Methylthiotransferase/radical SAM-type protein RJP_RS06365 IPR010106 Conserved hypothetical protein CHP01784 RJP_RS06370 IPR003646 SH3-like domain, bacterial-type RJP_RS06370 IPR010466 Protein of unknown function DUF1058 RJP_RS06375 IPR003148 Regulator of K+ conductance, N-terminal RJP_RS06375 IPR004771 K+/H+ exchanger RJP_RS06375 IPR006153 Cation/H+ exchanger RJP_RS06375 IPR016040 NAD(P)-binding domain RJP_RS06380 IPR004394 Protein Iojap/ribosomal silencing factor RsfS RJP_RS06385 IPR002634 BolA protein RJP_RS06440 IPR004368 Translation initiation factor IF-1 RJP_RS06440 IPR006196 RNA-binding domain, S1, IF1 type RJP_RS06440 IPR012340 Nucleic acid-binding, OB-fold RJP_RS06445 IPR003697 Maf-like protein RJP_RS06445 IPR029001 Inosine triphosphate pyrophosphatase-like RJP_RS06450 IPR000962 Zinc finger, DksA/TraR C4-type RJP_RS06450 IPR012784 RNA polymerase-binding transcription factor DksA RJP_RS06450 IPR020458 Zinc finger, DksA/TraR C4-type conserved site RJP_RS06455 IPR002104 Integrase, catalytic RJP_RS06455 IPR004107 Integrase, SAM-like, N-terminal RJP_RS06455 IPR011010 DNA breaking-rejoining enzyme, catalytic core RJP_RS06455 IPR013762 Integrase-like, catalytic core RJP_RS06455 IPR023009 Tyrosine recombinase XerC/XerD RJP_RS06455 IPR023109 Integrase/recombinase, N-terminal RJP_RS06460 IPR011990 Tetratricopeptide-like helical domain RJP_RS06460 IPR018968 Phasin RJP_RS06465 IPR001736 Phospholipase D/Transphosphatidylase RJP_RS06465 IPR025202 Phospholipase D-like domain RJP_RS06475 IPR029058 Alpha/Beta hydrolase fold RJP_RS06480 IPR002830 UbiD decarboxylyase family RJP_RS06480 IPR012349 FMN-binding split barrel RJP_RS06485 IPR000297 Peptidyl-prolyl cis-trans isomerase, PpiC-type RJP_RS06490 IPR005546 Autotransporter beta-domain RJP_RS06490 IPR006315 Outer membrane autotransporter barrel RJP_RS06495 IPR002543 FtsK domain RJP_RS06495 IPR003593 AAA+ ATPase domain RJP_RS06495 IPR011991 Winged helix-turn-helix DNA-binding domain RJP_RS06495 IPR018541 FtsK gamma domain RJP_RS06495 IPR025199 Domain of unknown function DUF4117 RJP_RS06495 IPR027417 P-loop containing nucleoside triphosphate hydrolase RJP_RS06505 IPR000994 Peptidase M24, structural domain RJP_RS06505 IPR001714 Peptidase M24, methionine aminopeptidase RJP_RS06505 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 RJP_RS06520 IPR000715 Glycosyl transferase, family 4 RJP_RS06525 IPR007922 Protein of unknown function DUF721/UPF0232 RJP_RS06525 IPR016507 Uncharacterised conserved protein UCP007061 RJP_RS06530 IPR011250 Outer membrane protein/outer membrane enzyme PagP , beta-barrel RJP_RS06530 IPR027385 Outer membrane protein beta-barrel RJP_RS06535 IPR011250 Outer membrane protein/outer membrane enzyme PagP , beta-barrel RJP_RS06535 IPR027385 Outer membrane protein beta-barrel RJP_RS06540 IPR000813 7Fe ferredoxin RJP_RS06540 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain RJP_RS06540 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site RJP_RS06540 IPR022569 Ferredoxin, C-terminal RJP_RS06545 IPR002541 Cytochrome c assembly protein RJP_RS06545 IPR003557 Cytochrome c-type biogenesis protein CcmC RJP_RS06550 IPR016192 APOBEC/CMP deaminase, zinc-binding RJP_RS06550 IPR016193 Cytidine deaminase-like RJP_RS06550 IPR028883 tRNA-specific adenosine deaminase RJP_RS06555 IPR002524 Cation efflux protein RJP_RS06555 IPR027469 Cation efflux protein transmembrane domain RJP_RS06555 IPR027470 Cation efflux protein cytoplasmic domain RJP_RS06560 IPR008816 Glycine zipper 2TM domain RJP_RS06560 IPR016364 Surface antigen, Rickettsia RJP_RS06560 IPR032635 RJP_RS06560 RJP_RS06570 IPR003439 ABC transporter-like RJP_RS06570 IPR003593 AAA+ ATPase domain RJP_RS06570 IPR017871 ABC transporter, conserved site RJP_RS06570 IPR027417 P-loop containing nucleoside triphosphate hydrolase RJP_RS06595 IPR003439 ABC transporter-like RJP_RS06595 IPR004602 UvrABC system subunit A RJP_RS06595 IPR013815 ATP-grasp fold, subdomain 1 RJP_RS06595 IPR017871 ABC transporter, conserved site RJP_RS06595 IPR027417 P-loop containing nucleoside triphosphate hydrolase RJP_RS06600 IPR000424 Primosome PriB/single-strand DNA-binding RJP_RS06600 IPR011344 Single-stranded DNA-binding protein RJP_RS06600 IPR012340 Nucleic acid-binding, OB-fold RJP_RS06605 IPR029058 Alpha/Beta hydrolase fold RJP_RS06615 IPR002196 Glycoside hydrolase, family 24 RJP_RS06615 IPR023346 Lysozyme-like domain RJP_RS06615 IPR023347 Lysozyme domain RJP_RS06630 IPR003746 Protein of unknown function DUF167 RJP_RS06635 IPR001404 Heat shock protein Hsp90 family RJP_RS06635 IPR003594 Histidine kinase-like ATPase, C-terminal domain RJP_RS06635 IPR019805 Heat shock protein Hsp90, conserved site RJP_RS06635 IPR020568 Ribosomal protein S5 domain 2-type fold RJP_RS06635 IPR020575 Heat shock protein Hsp90, N-terminal RJP_RS06640 IPR001917 Aminotransferase, class-II, pyridoxal-phosphate binding site RJP_RS06640 IPR004839 Aminotransferase, class I/classII RJP_RS06640 IPR010961 Tetrapyrrole biosynthesis, 5-aminolevulinic acid synthase RJP_RS06640 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 RJP_RS06640 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 RJP_RS06640 IPR015424 Pyridoxal phosphate-dependent transferase RJP_RS06650 IPR001179 Peptidyl-prolyl cis-trans isomerase, FKBP-type, domain RJP_RS06650 IPR005215 Trigger factor RJP_RS06650 IPR008880 Trigger factor, C-terminal domain RJP_RS06650 IPR008881 Trigger factor, ribosome-binding, bacterial RJP_RS06650 IPR027304 Trigger factor/SurA domain RJP_RS06655 IPR005225 Small GTP-binding protein domain RJP_RS06655 IPR006073 GTP binding domain RJP_RS06655 IPR006074 GTP1/OBG, conserved site RJP_RS06655 IPR006169 GTP1/OBG domain RJP_RS06655 IPR014100 GTP-binding protein Obg/CgtA RJP_RS06655 IPR027417 P-loop containing nucleoside triphosphate hydrolase RJP_RS06660 IPR002020 Citrate synthase-like RJP_RS06660 IPR010953 Citrate synthase, type I RJP_RS06660 IPR016142 Citrate synthase-like, large alpha subdomain RJP_RS06660 IPR016143 Citrate synthase-like, small alpha subdomain RJP_RS06660 IPR019810 Citrate synthase active site RJP_RS06660 IPR024176 Citrate synthase, bacterial-type RJP_RS06670 IPR005122 Uracil-DNA glycosylase-like RJP_RS06670 IPR005273 Uracil-DNA glycosylase, family 4 domain RJP_RS06675 IPR002942 RNA-binding S4 domain RJP_RS06675 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F RJP_RS06675 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site RJP_RS06675 IPR006225 Pseudouridine synthase, RluC/RluD RJP_RS06675 IPR020103 Pseudouridine synthase, catalytic domain RJP_RS06695 IPR002052 DNA methylase, N-6 adenine-specific, conserved site RJP_RS06695 IPR003358 tRNA (guanine-N-7) methyltransferase RJP_RS06695 IPR004556 Modification methylase HemK RJP_RS06695 IPR007848 Methyltransferase small domain RJP_RS06695 IPR019874 Protein-(glutamine-N5) methyltransferase, release factor-specific RJP_RS06695 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like RJP_RS06700 IPR005145 Putative GTP-binding controlling metal-binding domain RJP_RS06700 IPR006070 YrdC-like domain RJP_RS06700 IPR010923 tRNA threonylcarbamoyladenosine biosynthesis protein SUA5 RJP_RS06700 IPR017945 DHBP synthase RibB-like alpha/beta domain RJP_RS06705 IPR008909 DALR anticodon binding RJP_RS06705 IPR015944 Glycine-tRNA ligase, beta subunit RJP_RS06710 IPR002310 Glycine-tRNA ligase, alpha subunit RJP_RS06715 IPR002716 PIN domain RJP_RS06715 IPR029060 PIN domain-like RJP_RS06720 IPR006442 Type II toxin-antitoxin system, antitoxin Phd/YefM RJP_RS06725 IPR003828 Protein of unknown function DUF208 RJP_RS06730 IPR004736 Citrate-proton symport RJP_RS06730 IPR005828 General substrate transporter RJP_RS06730 IPR005829 Sugar transporter, conserved site RJP_RS06730 IPR020846 Major facilitator superfamily domain RJP_RS06735 IPR020180 Uncharacterised protein family RP853 RJP_RS06740 IPR020135 Uncharacterised protein family RP854 RJP_RS06750 IPR002318 Alanine-tRNA ligase, class IIc RJP_RS06750 IPR003156 DHHA1 domain RJP_RS06750 IPR009000 Translation protein, beta-barrel domain RJP_RS06750 IPR012947 Threonyl/alanyl tRNA synthetase, SAD RJP_RS06750 IPR018162 Alanine-tRNA ligase, class IIc, anti-codon-binding domain RJP_RS06750 IPR018163 Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain RJP_RS06750 IPR018164 Alanyl-tRNA synthetase, class IIc, N-terminal RJP_RS06750 IPR023033 Alanine-tRNA ligase, eukaryota/bacteria RJP_RS06755 IPR001406 Pseudouridine synthase I, TruA RJP_RS06755 IPR020094 Pseudouridine synthase I, TruA, N-terminal RJP_RS06755 IPR020095 Pseudouridine synthase I, TruA, C-terminal RJP_RS06755 IPR020097 Pseudouridine synthase I, TruA, alpha/beta domain RJP_RS06755 IPR020103 Pseudouridine synthase, catalytic domain RJP_RS06760 IPR000943 RNA polymerase sigma-70 RJP_RS06760 IPR007127 RNA polymerase sigma factor 70, region 1.1 RJP_RS06760 IPR007624 RNA polymerase sigma-70 region 3 RJP_RS06760 IPR007627 RNA polymerase sigma-70 region 2 RJP_RS06760 IPR007630 RNA polymerase sigma-70 region 4 RJP_RS06760 IPR007631 RNA polymerase sigma factor 70, non-essential domain RJP_RS06760 IPR009042 RNA polymerase sigma-70 region 1.2 RJP_RS06760 IPR011991 Winged helix-turn-helix DNA-binding domain RJP_RS06760 IPR012760 RNA polymerase sigma factor RpoD, C-terminal RJP_RS06760 IPR013324 RNA polymerase sigma factor, region 3/4 RJP_RS06760 IPR013325 RNA polymerase sigma factor, region 2 RJP_RS06760 IPR014284 RNA polymerase sigma-70 like domain RJP_RS06760 IPR028630 RNA polymerase sigma factor RpoD RJP_RS06765 IPR002694 Zinc finger, CHC2-type RJP_RS06765 IPR006171 Toprim domain RJP_RS06765 IPR006295 DNA primase, DnaG RJP_RS06765 IPR013264 DNA primase, catalytic core, N-terminal RJP_RS06765 IPR030846 RJP_RS06765 RJP_RS06770 IPR032974 RJP_RS06770 RJP_RS06775 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal RJP_RS06775 IPR006359 Transcription elongation factor GreA RJP_RS06775 IPR018151 Transcription elongation factor, GreA/GreB, conserved site RJP_RS06775 IPR022691 Transcription elongation factor, GreA/GreB, N-terminal RJP_RS06775 IPR023459 Transcription elongation factor GreA/GreB family RJP_RS06775 IPR028624 Transcription elongation factor GreA/GreB RJP_RS06780 IPR024605 NAD(P) transhydrogenase, alpha subunit, C-terminal RJP_RS06785 IPR007698 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, NAD(H)-binding domain RJP_RS06785 IPR007886 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, N-terminal RJP_RS06785 IPR016040 NAD(P)-binding domain RJP_RS06790 IPR004564 Outer membrane lipoprotein carrier protein LolA-like RJP_RS06790 IPR029046 Lipoprotein localisation LolA/LolB/LppX RJP_RS06795 IPR003593 AAA+ ATPase domain RJP_RS06795 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal RJP_RS06795 IPR012763 DNA polymerase III, subunit gamma/ tau RJP_RS06795 IPR022754 DNA polymerase III, gamma subunit, domain III RJP_RS06795 IPR027417 P-loop containing nucleoside triphosphate hydrolase RJP_RS06800 IPR004401 Nucleoid-associated protein YbaB RJP_RS06810 IPR002110 Ankyrin repeat RJP_RS06810 IPR020683 Ankyrin repeat-containing domain RJP_RS06815 IPR001969 Aspartic peptidase, active site RJP_RS06815 IPR011969 Peptidase aspartic, CHP02281 RJP_RS06815 IPR021109 Aspartic peptidase domain RJP_RS06835 IPR003439 ABC transporter-like RJP_RS06835 IPR003593 AAA+ ATPase domain RJP_RS06835 IPR027417 P-loop containing nucleoside triphosphate hydrolase RJP_RS06835 IPR030679 RJP_RS06835 RJP_RS06840 IPR001279 Beta-lactamase-like RJP_RS06845 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase RJP_RS06850 IPR007337 RelB antitoxin/Antitoxin DinJ RJP_RS06850 IPR026262 Antitoxin DinJ RJP_RS06855 IPR005495 Permease YjgP/YjgQ, predicted RJP_RS06860 IPR007459 DNA polymerase III chi subunit, HolC RJP_RS06870 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site RJP_RS06870 IPR002933 Peptidase M20 RJP_RS06870 IPR005941 Succinyl-diaminopimelate desuccinylase, proteobacteria RJP_RS06870 IPR011650 Peptidase M20, dimerisation domain RJP_RS06875 IPR000055 Restriction endonuclease, type I, HsdS RJP_RS06890 IPR023171 Na/H antiporter domain RJP_RS06905 IPR000544 Octanoyltransferase RJP_RS06905 IPR004143 Biotin/lipoate A/B protein ligase RJP_RS06905 IPR020605 Octanoyltransferase, conserved site RJP_RS06910 IPR002477 Peptidoglycan binding-like RJP_RS06910 IPR002502 N-acetylmuramoyl-L-alanine amidase domain RJP_RS06920 IPR000307 Ribosomal protein S16 RJP_RS06920 IPR020592 Ribosomal protein S16, conserved site RJP_RS06920 IPR023803 Ribosomal protein S16 domain RJP_RS06925 IPR001705 Ribosomal protein L33 RJP_RS06925 IPR011332 Zinc-binding ribosomal protein RJP_RS06925 IPR018264 Ribosomal protein L33, conserved site RJP_RS06930 IPR002099 DNA mismatch repair protein family RJP_RS06930 IPR003594 Histidine kinase-like ATPase, C-terminal domain RJP_RS06930 IPR013507 DNA mismatch repair protein, C-terminal RJP_RS06930 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup RJP_RS06930 IPR014762 DNA mismatch repair, conserved site RJP_RS06930 IPR014790 MutL, C-terminal, dimerisation RJP_RS06930 IPR020568 Ribosomal protein S5 domain 2-type fold RJP_RS06930 IPR020667 DNA mismatch repair protein, MutL RJP_RS06935 IPR002347 Glucose/ribitol dehydrogenase RJP_RS06935 IPR016040 NAD(P)-binding domain RJP_RS06945 IPR001440 Tetratricopeptide TPR1 RJP_RS06945 IPR011990 Tetratricopeptide-like helical domain RJP_RS06945 IPR019734 Tetratricopeptide repeat RJP_RS06950 IPR001440 Tetratricopeptide TPR1 RJP_RS06950 IPR011990 Tetratricopeptide-like helical domain RJP_RS06950 IPR019734 Tetratricopeptide repeat RJP_RS06955 IPR011701 Major facilitator superfamily RJP_RS06955 IPR020846 Major facilitator superfamily domain RJP_RS06960 IPR001260 Coproporphyrinogen III oxidase, aerobic RJP_RS06960 IPR018375 Coproporphyrinogen III oxidase, conserved site RJP_RS06970 IPR003497 BRO N-terminal domain RJP_RS06980 IPR005265 Uncharacterised protein family UPF0093 RJP_RS06980 IPR014351 Conserved hypothetical protein CHP00701 RJP_RS06985 IPR001015 Ferrochelatase RJP_RS06985 IPR019772 Ferrochelatase, active site RJP_RS06990 IPR000257 Uroporphyrinogen decarboxylase (URO-D) RJP_RS06990 IPR006361 Uroporphyrinogen decarboxylase HemE RJP_RS07030 IPR005546 Autotransporter beta-domain RJP_RS07030 IPR006315 Outer membrane autotransporter barrel RJP_RS07090 IPR009387 Toxin HigB