RJP_RS00050	PWY-5971	palmitate biosynthesis II (bacteria and plants)
RJP_RS00050	PWY-5973	<i>cis</i>-vaccenate biosynthesis
RJP_RS00050	PWY-5989	stearate biosynthesis II (bacteria and plants)
RJP_RS00050	PWY-5994	palmitate biosynthesis I (animals and fungi)
RJP_RS00050	PWY-6113	superpathway of mycolate biosynthesis
RJP_RS00050	PWY-6282	palmitoleate biosynthesis I (from (5Z)-dodec-5-enoate)
RJP_RS00050	PWY-6519	8-amino-7-oxononanoate biosynthesis I
RJP_RS00050	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
RJP_RS00050	PWY-7663	gondoate biosynthesis (anaerobic)
RJP_RS00050	PWY-7664	oleate biosynthesis IV (anaerobic)
RJP_RS00050	PWYG-321	mycolate biosynthesis
RJP_RS00225	PWY-3841	folate transformations II
RJP_RS00225	PWY-6614	tetrahydrofolate biosynthesis
RJP_RS00235	PWY-6147	6-hydroxymethyl-dihydropterin diphosphate biosynthesis I
RJP_RS00235	PWY-6148	tetrahydromethanopterin biosynthesis
RJP_RS00235	PWY-6797	6-hydroxymethyl-dihydropterin diphosphate biosynthesis II (archaea)
RJP_RS00235	PWY-7539	6-hydroxymethyl-dihydropterin diphosphate biosynthesis III (Chlamydia)
RJP_RS00355	PWY-5353	arachidonate biosynthesis I (lower eukaryotes)
RJP_RS00355	PWY-5368	dimorphecolate biosynthesis
RJP_RS00355	PWY-5995	linoleate biosynthesis I (plants)
RJP_RS00355	PWY-6433	hydroxylated fatty acid biosynthesis (plants)
RJP_RS00355	PWY-6803	phosphatidylcholine acyl editing
RJP_RS00355	PWY-6958	icosapentaenoate biosynthesis I (lower eukaryotes)
RJP_RS00355	PWY-7409	phospholipid remodeling (phosphatidylethanolamine, yeast)
RJP_RS00355	PWY-7416	phospholipid remodeling (phosphatidylcholine, yeast)
RJP_RS00355	PWY-7470	phosphatidylcholine biosynthesis VII
RJP_RS00355	PWY-7618	ricinoleate biosynthesis
RJP_RS00410	PWY-3781	aerobic respiration I (cytochrome c)
RJP_RS00410	PWY-4302	aerobic respiration III (alternative oxidase pathway)
RJP_RS00410	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
RJP_RS00410	PWY-5690	TCA cycle II (plants and fungi)
RJP_RS00410	PWY-6728	methylaspartate cycle
RJP_RS00410	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
RJP_RS00410	PWY-7254	TCA cycle VII (acetate-producers)
RJP_RS00410	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
RJP_RS00440	PWY-5269	cardiolipin biosynthesis II
RJP_RS00440	PWY-5668	cardiolipin biosynthesis I
RJP_RS00445	PWY-241	C4 photosynthetic carbon assimilation cycle, NADP-ME type
RJP_RS00445	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
RJP_RS00445	PWY-7115	C4 photosynthetic carbon assimilation cycle, NAD-ME type
RJP_RS00445	PWY-7117	C4 photosynthetic carbon assimilation cycle, PEPCK type
RJP_RS00490	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
RJP_RS00490	PWY-7176	UTP and CTP <i>de novo</i> biosynthesis
RJP_RS00490	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
RJP_RS00490	PWY-7187	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis II
RJP_RS00490	PWY-7197	pyrimidine deoxyribonucleotide phosphorylation
RJP_RS00490	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
RJP_RS00490	PWY-7205	CMP phosphorylation
RJP_RS00490	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
RJP_RS00490	PWY-7220	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis II
RJP_RS00490	PWY-7221	guanosine ribonucleotides <i>de novo</i> biosynthesis
RJP_RS00490	PWY-7222	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis II
RJP_RS00490	PWY-7224	purine deoxyribonucleosides salvage
RJP_RS00490	PWY-7226	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis I
RJP_RS00490	PWY-7227	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis
RJP_RS00525	PWY-1269	CMP-3-deoxy-D-<I>manno</I>-octulosonate biosynthesis I
RJP_RS00525	PWY-7674	CMP-8-amino-3,8-dideoxy-D-<I>manno</I>-octulosonate biosynthesis
RJP_RS00580	PWY-7187	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis II
RJP_RS00595	PWY-6700	queuosine biosynthesis
RJP_RS00665	PWY-7675	Kdo transfer to lipid IV<sub>A</sub> II
RJP_RS00720	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
RJP_RS00770	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
RJP_RS00770	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
RJP_RS00810	PWY-1281	sulfoacetaldehyde degradation I
RJP_RS00810	PWY-5482	pyruvate fermentation to acetate II
RJP_RS00810	PWY-5485	pyruvate fermentation to acetate IV
RJP_RS00810	PWY-5497	purine nucleobases degradation II (anaerobic)
RJP_RS00810	PWY-6637	sulfolactate degradation II
RJP_RS00830	PWY-6829	tRNA methylation (yeast)
RJP_RS00830	PWY-7285	methylwyosine biosynthesis
RJP_RS00830	PWY-7286	7-(3-amino-3-carboxypropyl)-wyosine biosynthesis
RJP_RS00875	PWY-6004	glycine betaine biosynthesis V (from glycine)
RJP_RS00930	PWY-3781	aerobic respiration I (cytochrome c)
RJP_RS00930	PWY-4302	aerobic respiration III (alternative oxidase pathway)
RJP_RS00930	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
RJP_RS00930	PWY-5690	TCA cycle II (plants and fungi)
RJP_RS00930	PWY-6728	methylaspartate cycle
RJP_RS00930	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
RJP_RS00930	PWY-7254	TCA cycle VII (acetate-producers)
RJP_RS00930	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
RJP_RS01035	PWY-2941	L-lysine biosynthesis II
RJP_RS01035	PWY-2942	L-lysine biosynthesis III
RJP_RS01035	PWY-5097	L-lysine biosynthesis VI
RJP_RS01055	PWY-5921	glutaminyl-tRNA<sup>gln</sup> biosynthesis via transamidation
RJP_RS01145	PWY-2201	folate transformations I
RJP_RS01245	PWY-5084	2-oxoglutarate decarboxylation to succinyl-CoA
RJP_RS01250	PWY-5084	2-oxoglutarate decarboxylation to succinyl-CoA
RJP_RS01520	PWY-6700	queuosine biosynthesis
RJP_RS01580	PWY-6123	inosine-5'-phosphate biosynthesis I
RJP_RS01580	PWY-6124	inosine-5'-phosphate biosynthesis II
RJP_RS01580	PWY-7234	inosine-5'-phosphate biosynthesis III
RJP_RS01710	PWY-6454	vancomycin resistance I
RJP_RS01710	PWY-6455	vancomycin resistance II
RJP_RS01750	PWY-5669	phosphatidylethanolamine biosynthesis I
RJP_RS01785	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
RJP_RS01785	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
RJP_RS01790	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
RJP_RS01790	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
RJP_RS01795	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
RJP_RS01795	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
RJP_RS01825	PWY-2201	folate transformations I
RJP_RS01825	PWY-5497	purine nucleobases degradation II (anaerobic)
RJP_RS01890	PWY-5913	TCA cycle VI (obligate autotrophs)
RJP_RS01890	PWY-6549	L-glutamine biosynthesis III
RJP_RS01890	PWY-6728	methylaspartate cycle
RJP_RS01890	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
RJP_RS01890	PWY-7124	ethylene biosynthesis V (engineered)
RJP_RS01890	PWY-7254	TCA cycle VII (acetate-producers)
RJP_RS01890	PWY-7268	NAD/NADP-NADH/NADPH cytosolic interconversion (yeast)
RJP_RS01915	PWY-3781	aerobic respiration I (cytochrome c)
RJP_RS01915	PWY-6692	Fe(II) oxidation
RJP_RS01915	PWY-7082	ammonia oxidation IV (autotrophic ammonia oxidizers)
RJP_RS01915	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
RJP_RS02190	PWY-5041	<i>S</i>-adenosyl-L-methionine cycle II
RJP_RS02190	PWY-6151	<i>S</i>-adenosyl-L-methionine cycle I
RJP_RS02190	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
RJP_RS02190	PWY-6936	seleno-amino acid biosynthesis
RJP_RS02190	PWY-702	L-methionine biosynthesis II
RJP_RS02315	PWY-2941	L-lysine biosynthesis II
RJP_RS02315	PWY-2942	L-lysine biosynthesis III
RJP_RS02315	PWY-5097	L-lysine biosynthesis VI
RJP_RS02315	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
RJP_RS02315	PWY-6559	spermidine biosynthesis II
RJP_RS02315	PWY-6562	norspermidine biosynthesis
RJP_RS02315	PWY-7153	grixazone biosynthesis
RJP_RS02315	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
RJP_RS02370	PWY-5067	glycogen biosynthesis II (from UDP-D-Glucose)
RJP_RS02370	PWY-622	starch biosynthesis
RJP_RS02410	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
RJP_RS02460	PWY-3821	galactose degradation III
RJP_RS02460	PWY-6317	galactose degradation I (Leloir pathway)
RJP_RS02460	PWY-6397	mycolyl-arabinogalactan-peptidoglycan complex biosynthesis
RJP_RS02460	PWY-6527	stachyose degradation
RJP_RS02460	PWY-7328	superpathway of UDP-glucose-derived O-antigen building blocks biosynthesis
RJP_RS02460	PWY-7344	UDP-D-galactose biosynthesis
RJP_RS02465	PWY-7335	UDP-<i>N</i>-acetyl-&alpha;-D-mannosaminouronate biosynthesis
RJP_RS02660	PWY-5971	palmitate biosynthesis II (bacteria and plants)
RJP_RS02660	PWY-5973	<i>cis</i>-vaccenate biosynthesis
RJP_RS02660	PWY-5989	stearate biosynthesis II (bacteria and plants)
RJP_RS02660	PWY-6113	superpathway of mycolate biosynthesis
RJP_RS02660	PWY-6282	palmitoleate biosynthesis I (from (5Z)-dodec-5-enoate)
RJP_RS02660	PWY-6519	8-amino-7-oxononanoate biosynthesis I
RJP_RS02660	PWY-7663	gondoate biosynthesis (anaerobic)
RJP_RS02660	PWY-7664	oleate biosynthesis IV (anaerobic)
RJP_RS02660	PWYG-321	mycolate biosynthesis
RJP_RS02710	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
RJP_RS02720	PWY-1281	sulfoacetaldehyde degradation I
RJP_RS02720	PWY-241	C4 photosynthetic carbon assimilation cycle, NADP-ME type
RJP_RS02720	PWY-5482	pyruvate fermentation to acetate II
RJP_RS02720	PWY-5485	pyruvate fermentation to acetate IV
RJP_RS02720	PWY-5497	purine nucleobases degradation II (anaerobic)
RJP_RS02720	PWY-6637	sulfolactate degradation II
RJP_RS02720	PWY-7117	C4 photosynthetic carbon assimilation cycle, PEPCK type
RJP_RS02770	PWY-1622	formaldehyde assimilation I (serine pathway)
RJP_RS02770	PWY-5392	reductive TCA cycle II
RJP_RS02770	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
RJP_RS02770	PWY-5690	TCA cycle II (plants and fungi)
RJP_RS02770	PWY-5913	TCA cycle VI (obligate autotrophs)
RJP_RS02770	PWY-6728	methylaspartate cycle
RJP_RS02770	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
RJP_RS02770	PWY-7115	C4 photosynthetic carbon assimilation cycle, NAD-ME type
RJP_RS02770	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
RJP_RS02790	PWY-7176	UTP and CTP <i>de novo</i> biosynthesis
RJP_RS02790	PWY-7177	UTP and CTP dephosphorylation II
RJP_RS02790	PWY-7185	UTP and CTP dephosphorylation I
RJP_RS02795	PWY-1269	CMP-3-deoxy-D-<I>manno</I>-octulosonate biosynthesis I
RJP_RS02815	PWY-3781	aerobic respiration I (cytochrome c)
RJP_RS02815	PWY-4521	arsenite oxidation I (respiratory)
RJP_RS02815	PWY-6692	Fe(II) oxidation
RJP_RS02815	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
RJP_RS02820	PWY-5663	tetrahydrobiopterin biosynthesis I
RJP_RS02820	PWY-5664	tetrahydrobiopterin biosynthesis II
RJP_RS02820	PWY-6147	6-hydroxymethyl-dihydropterin diphosphate biosynthesis I
RJP_RS02820	PWY-6703	preQ<sub>0</sub> biosynthesis
RJP_RS02820	PWY-6983	tetrahydrobiopterin biosynthesis III
RJP_RS02820	PWY-7442	drosopterin and aurodrosopterin biosynthesis
RJP_RS02915	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
RJP_RS02915	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
RJP_RS02915	PWY-7187	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis II
RJP_RS02915	PWY-7206	pyrimidine deoxyribonucleotides dephosphorylation
RJP_RS02950	PWY-3781	aerobic respiration I (cytochrome c)
RJP_RS02950	PWY-4521	arsenite oxidation I (respiratory)
RJP_RS02950	PWY-6692	Fe(II) oxidation
RJP_RS02950	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
RJP_RS02980	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
RJP_RS02980	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
RJP_RS02990	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
RJP_RS02990	PWY-6385	peptidoglycan biosynthesis III (mycobacteria)
RJP_RS02990	PWY-6470	peptidoglycan biosynthesis V (&beta;-lactam resistance)
RJP_RS02990	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
RJP_RS03065	PWY-2941	L-lysine biosynthesis II
RJP_RS03065	PWY-5097	L-lysine biosynthesis VI
RJP_RS03115	PWY-5667	CDP-diacylglycerol biosynthesis I
RJP_RS03115	PWY-5981	CDP-diacylglycerol biosynthesis III
RJP_RS03135	PWY-5057	L-valine degradation II
RJP_RS03135	PWY-5076	L-leucine degradation III
RJP_RS03135	PWY-5078	L-isoleucine degradation II
RJP_RS03135	PWY-5101	L-isoleucine biosynthesis II
RJP_RS03135	PWY-5103	L-isoleucine biosynthesis III
RJP_RS03135	PWY-5104	L-isoleucine biosynthesis IV
RJP_RS03135	PWY-5108	L-isoleucine biosynthesis V
RJP_RS03140	PWY-2941	L-lysine biosynthesis II
RJP_RS03140	PWY-2942	L-lysine biosynthesis III
RJP_RS03140	PWY-5097	L-lysine biosynthesis VI
RJP_RS03155	PWY-5392	reductive TCA cycle II
RJP_RS03155	PWY-5537	pyruvate fermentation to acetate V
RJP_RS03155	PWY-5538	pyruvate fermentation to acetate VI
RJP_RS03155	PWY-5690	TCA cycle II (plants and fungi)
RJP_RS03155	PWY-5913	TCA cycle VI (obligate autotrophs)
RJP_RS03155	PWY-6728	methylaspartate cycle
RJP_RS03155	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
RJP_RS03155	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
RJP_RS03160	PWY-5392	reductive TCA cycle II
RJP_RS03160	PWY-5537	pyruvate fermentation to acetate V
RJP_RS03160	PWY-5538	pyruvate fermentation to acetate VI
RJP_RS03160	PWY-5690	TCA cycle II (plants and fungi)
RJP_RS03160	PWY-5913	TCA cycle VI (obligate autotrophs)
RJP_RS03160	PWY-6728	methylaspartate cycle
RJP_RS03160	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
RJP_RS03160	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
RJP_RS03230	PWY-5083	NAD/NADH phosphorylation and dephosphorylation
RJP_RS03230	PWY-7268	NAD/NADP-NADH/NADPH cytosolic interconversion (yeast)
RJP_RS03230	PWY-7269	NAD/NADP-NADH/NADPH mitochondrial interconversion (yeast)
RJP_RS03240	PWY-5667	CDP-diacylglycerol biosynthesis I
RJP_RS03240	PWY-5981	CDP-diacylglycerol biosynthesis III
RJP_RS03360	PWY-1722	formate reduction to 5,10-methylenetetrahydrofolate
RJP_RS03360	PWY-2201	folate transformations I
RJP_RS03360	PWY-3841	folate transformations II
RJP_RS03360	PWY-5030	L-histidine degradation III
RJP_RS03360	PWY-5497	purine nucleobases degradation II (anaerobic)
RJP_RS03360	PWY-6613	tetrahydrofolate salvage from 5,10-methenyltetrahydrofolate
RJP_RS03365	PWY-101	photosynthesis light reactions
RJP_RS03365	PWY-7230	ubiquinol-6 biosynthesis from 4-aminobenzoate (eukaryotic)
RJP_RS03430	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
RJP_RS03430	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
RJP_RS03430	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
RJP_RS03430	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
RJP_RS03430	PWY-7220	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis II
RJP_RS03430	PWY-7222	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis II
RJP_RS03430	PWY-7226	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis I
RJP_RS03430	PWY-7227	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis
RJP_RS03445	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
RJP_RS03445	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
RJP_RS03445	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
RJP_RS03445	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
RJP_RS03445	PWY-7220	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis II
RJP_RS03445	PWY-7222	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis II
RJP_RS03445	PWY-7226	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis I
RJP_RS03445	PWY-7227	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis
RJP_RS03465	PWY-2781	<i>cis</i>-zeatin biosynthesis
RJP_RS03470	PWY-6749	CMP-legionaminate biosynthesis I
RJP_RS03530	PWY-381	nitrate reduction II (assimilatory)
RJP_RS03530	PWY-5675	nitrate reduction V (assimilatory)
RJP_RS03530	PWY-6549	L-glutamine biosynthesis III
RJP_RS03530	PWY-6963	ammonia assimilation cycle I
RJP_RS03530	PWY-6964	ammonia assimilation cycle II
RJP_RS03555	PWY-241	C4 photosynthetic carbon assimilation cycle, NADP-ME type
RJP_RS03555	PWY-6549	L-glutamine biosynthesis III
RJP_RS03555	PWY-7115	C4 photosynthetic carbon assimilation cycle, NAD-ME type
RJP_RS03555	PWY-7117	C4 photosynthetic carbon assimilation cycle, PEPCK type
RJP_RS03575	PWY-2161	folate polyglutamylation
RJP_RS03585	PWY-6854	ethylene biosynthesis III (microbes)
RJP_RS03650	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
RJP_RS03720	PWY-7205	CMP phosphorylation
RJP_RS03745	PWY-5123	<i>trans, trans</i>-farnesyl diphosphate biosynthesis
RJP_RS03745	PWY-6174	mevalonate pathway II (archaea)
RJP_RS03745	PWY-6383	mono-<i>trans</i>, poly-<i>cis</i> decaprenyl phosphate biosynthesis
RJP_RS03745	PWY-6859	<i>all-trans</i>-farnesol biosynthesis
RJP_RS03745	PWY-7102	bisabolene biosynthesis
RJP_RS03745	PWY-7391	isoprene biosynthesis II (engineered)
RJP_RS03745	PWY-7524	mevalonate pathway III (archaea)
RJP_RS03745	PWY-7560	methylerythritol phosphate pathway II
RJP_RS03745	PWY-922	mevalonate pathway I
RJP_RS03845	PWY-5046	2-oxoisovalerate decarboxylation to isobutanoyl-CoA
RJP_RS03845	PWY-5084	2-oxoglutarate decarboxylation to succinyl-CoA
RJP_RS03905	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
RJP_RS03905	PWY-5189	tetrapyrrole biosynthesis II (from glycine)
RJP_RS03960	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
RJP_RS03960	PWY-5189	tetrapyrrole biosynthesis II (from glycine)
RJP_RS04065	PWY-6823	molybdenum cofactor biosynthesis
RJP_RS04065	PWY-6891	thiazole biosynthesis II (Bacillus)
RJP_RS04065	PWY-6892	thiazole biosynthesis I (E. coli)
RJP_RS04065	PWY-7250	[2Fe-2S] iron-sulfur cluster biosynthesis
RJP_RS04070	PWY-6823	molybdenum cofactor biosynthesis
RJP_RS04070	PWY-6891	thiazole biosynthesis II (Bacillus)
RJP_RS04070	PWY-6892	thiazole biosynthesis I (E. coli)
RJP_RS04070	PWY-7250	[2Fe-2S] iron-sulfur cluster biosynthesis
RJP_RS04140	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
RJP_RS04140	PWY-5189	tetrapyrrole biosynthesis II (from glycine)
RJP_RS04220	PWY-5353	arachidonate biosynthesis I (lower eukaryotes)
RJP_RS04220	PWY-5368	dimorphecolate biosynthesis
RJP_RS04220	PWY-5995	linoleate biosynthesis I (plants)
RJP_RS04220	PWY-6433	hydroxylated fatty acid biosynthesis (plants)
RJP_RS04220	PWY-6803	phosphatidylcholine acyl editing
RJP_RS04220	PWY-6958	icosapentaenoate biosynthesis I (lower eukaryotes)
RJP_RS04220	PWY-7409	phospholipid remodeling (phosphatidylethanolamine, yeast)
RJP_RS04220	PWY-7416	phospholipid remodeling (phosphatidylcholine, yeast)
RJP_RS04220	PWY-7470	phosphatidylcholine biosynthesis VII
RJP_RS04220	PWY-7618	ricinoleate biosynthesis
RJP_RS04330	PWY-1361	benzoyl-CoA degradation I (aerobic)
RJP_RS04330	PWY-5109	2-methylbutanoate biosynthesis
RJP_RS04330	PWY-5136	fatty acid &beta;-oxidation II (peroxisome)
RJP_RS04330	PWY-5138	unsaturated, even numbered fatty acid &beta;-oxidation
RJP_RS04330	PWY-5177	glutaryl-CoA degradation
RJP_RS04330	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
RJP_RS04330	PWY-6435	4-hydroxybenzoate biosynthesis V
RJP_RS04330	PWY-6583	pyruvate fermentation to butanol I
RJP_RS04330	PWY-6863	pyruvate fermentation to hexanol
RJP_RS04330	PWY-6883	pyruvate fermentation to butanol II
RJP_RS04330	PWY-6944	androstenedione degradation
RJP_RS04330	PWY-6945	cholesterol degradation to androstenedione I (cholesterol oxidase)
RJP_RS04330	PWY-6946	cholesterol degradation to androstenedione II (cholesterol dehydrogenase)
RJP_RS04330	PWY-7007	methyl ketone biosynthesis
RJP_RS04330	PWY-7046	4-coumarate degradation (anaerobic)
RJP_RS04330	PWY-7094	fatty acid salvage
RJP_RS04330	PWY-7216	(R)- and (S)-3-hydroxybutanoate biosynthesis
RJP_RS04330	PWY-735	jasmonic acid biosynthesis
RJP_RS04330	PWY-7401	crotonate fermentation (to acetate and cyclohexane carboxylate)
RJP_RS04330	PWY-7606	docosahexaenoate biosynthesis III (mammals)
RJP_RS04330	PWY-7726	RJP_RS04330
RJP_RS04335	PWY-1361	benzoyl-CoA degradation I (aerobic)
RJP_RS04335	PWY-5109	2-methylbutanoate biosynthesis
RJP_RS04335	PWY-5136	fatty acid &beta;-oxidation II (peroxisome)
RJP_RS04335	PWY-5138	unsaturated, even numbered fatty acid &beta;-oxidation
RJP_RS04335	PWY-5177	glutaryl-CoA degradation
RJP_RS04335	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
RJP_RS04335	PWY-6435	4-hydroxybenzoate biosynthesis V
RJP_RS04335	PWY-6583	pyruvate fermentation to butanol I
RJP_RS04335	PWY-6863	pyruvate fermentation to hexanol
RJP_RS04335	PWY-6883	pyruvate fermentation to butanol II
RJP_RS04335	PWY-6944	androstenedione degradation
RJP_RS04335	PWY-6945	cholesterol degradation to androstenedione I (cholesterol oxidase)
RJP_RS04335	PWY-6946	cholesterol degradation to androstenedione II (cholesterol dehydrogenase)
RJP_RS04335	PWY-7007	methyl ketone biosynthesis
RJP_RS04335	PWY-7046	4-coumarate degradation (anaerobic)
RJP_RS04335	PWY-7094	fatty acid salvage
RJP_RS04335	PWY-7216	(R)- and (S)-3-hydroxybutanoate biosynthesis
RJP_RS04335	PWY-735	jasmonic acid biosynthesis
RJP_RS04335	PWY-7401	crotonate fermentation (to acetate and cyclohexane carboxylate)
RJP_RS04335	PWY-7606	docosahexaenoate biosynthesis III (mammals)
RJP_RS04335	PWY-7726	RJP_RS04335
RJP_RS04410	PWY-2201	folate transformations I
RJP_RS04575	PWY-6012	acyl carrier protein metabolism I
RJP_RS04575	PWY-6012-1	acyl carrier protein metabolism II (mammalian)
RJP_RS04585	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
RJP_RS04585	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
RJP_RS04720	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
RJP_RS04725	PWY-5855	ubiquinol-7 biosynthesis (prokaryotic)
RJP_RS04725	PWY-5856	ubiquinol-9 biosynthesis (prokaryotic)
RJP_RS04725	PWY-5857	ubiquinol-10 biosynthesis (prokaryotic)
RJP_RS04725	PWY-5870	ubiquinol-8 biosynthesis (eukaryotic)
RJP_RS04725	PWY-5871	ubiquinol-9 biosynthesis (eukaryotic)
RJP_RS04725	PWY-5872	ubiquinol-10 biosynthesis (eukaryotic)
RJP_RS04725	PWY-5873	ubiquinol-7 biosynthesis (eukaryotic)
RJP_RS04725	PWY-6708	ubiquinol-8 biosynthesis (prokaryotic)
RJP_RS04725	PWY-7230	ubiquinol-6 biosynthesis from 4-aminobenzoate (eukaryotic)
RJP_RS04725	PWY-7233	ubiquinol-6 bypass biosynthesis (eukaryotic)
RJP_RS04750	PWY-4381	fatty acid biosynthesis initiation I
RJP_RS04750	PWY-5743	3-hydroxypropanoate cycle
RJP_RS04750	PWY-5744	glyoxylate assimilation
RJP_RS04750	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
RJP_RS04750	PWY-6679	jadomycin biosynthesis
RJP_RS04750	PWY-6722	candicidin biosynthesis
RJP_RS04750	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
RJP_RS04875	PWY-6703	preQ<sub>0</sub> biosynthesis
RJP_RS04895	PWY-6308	L-cysteine biosynthesis II (tRNA-dependent)
RJP_RS04980	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
RJP_RS04980	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
RJP_RS04985	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
RJP_RS04985	PWY-6470	peptidoglycan biosynthesis V (&beta;-lactam resistance)
RJP_RS04985	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
RJP_RS05125	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
RJP_RS05265	PWY-5392	reductive TCA cycle II
RJP_RS05265	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
RJP_RS05265	PWY-5690	TCA cycle II (plants and fungi)
RJP_RS05265	PWY-5913	TCA cycle VI (obligate autotrophs)
RJP_RS05265	PWY-6728	methylaspartate cycle
RJP_RS05265	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
RJP_RS05265	PWY-7254	TCA cycle VII (acetate-producers)
RJP_RS05265	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
RJP_RS05395	PWY-5839	menaquinol-7 biosynthesis
RJP_RS05395	PWY-5844	menaquinol-9 biosynthesis
RJP_RS05395	PWY-5849	menaquinol-6 biosynthesis
RJP_RS05395	PWY-5890	menaquinol-10 biosynthesis
RJP_RS05395	PWY-5891	menaquinol-11 biosynthesis
RJP_RS05395	PWY-5892	menaquinol-12 biosynthesis
RJP_RS05395	PWY-5895	menaquinol-13 biosynthesis
RJP_RS05450	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
RJP_RS05450	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
RJP_RS05450	PWY-7187	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis II
RJP_RS05450	PWY-7197	pyrimidine deoxyribonucleotide phosphorylation
RJP_RS05450	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
RJP_RS05450	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
RJP_RS05550	PWY-6703	preQ<sub>0</sub> biosynthesis
RJP_RS05685	PWY-6700	queuosine biosynthesis
RJP_RS05770	PWY-4381	fatty acid biosynthesis initiation I
RJP_RS05770	PWY-6799	fatty acid biosynthesis (plant mitochondria)
RJP_RS05770	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
RJP_RS05870	PWY-6987	lipoate biosynthesis and incorporation III (Bacillus)
RJP_RS05870	PWY-7382	lipoate biosynthesis and incorporation (pyruvate dehydrogenase and oxoglutarate dehydrogenase, yeast)
RJP_RS05875	PWY-1622	formaldehyde assimilation I (serine pathway)
RJP_RS05875	PWY-181	photorespiration
RJP_RS05875	PWY-2161	folate polyglutamylation
RJP_RS05875	PWY-2201	folate transformations I
RJP_RS05875	PWY-3661	glycine betaine degradation I
RJP_RS05875	PWY-3661-1	glycine betaine degradation II (mammalian)
RJP_RS05875	PWY-3841	folate transformations II
RJP_RS05875	PWY-5497	purine nucleobases degradation II (anaerobic)
RJP_RS05925	PWY-2201	folate transformations I
RJP_RS05940	PWY-5269	cardiolipin biosynthesis II
RJP_RS05940	PWY-5668	cardiolipin biosynthesis I
RJP_RS05955	PWY-2941	L-lysine biosynthesis II
RJP_RS05955	PWY-2942	L-lysine biosynthesis III
RJP_RS05955	PWY-5097	L-lysine biosynthesis VI
RJP_RS05955	PWY-6559	spermidine biosynthesis II
RJP_RS05955	PWY-6562	norspermidine biosynthesis
RJP_RS05955	PWY-7153	grixazone biosynthesis
RJP_RS06005	PWY-5022	4-aminobutanoate degradation V
RJP_RS06005	PWY-6728	methylaspartate cycle
RJP_RS06005	PWY-7126	ethylene biosynthesis IV
RJP_RS06050	PWY-5367	petroselinate biosynthesis
RJP_RS06050	PWY-5515	L-arabinose degradation II
RJP_RS06050	PWY-5525	D-glucuronate degradation I
RJP_RS06050	PWY-5971	palmitate biosynthesis II (bacteria and plants)
RJP_RS06050	PWY-5973	<i>cis</i>-vaccenate biosynthesis
RJP_RS06050	PWY-5989	stearate biosynthesis II (bacteria and plants)
RJP_RS06050	PWY-5994	palmitate biosynthesis I (animals and fungi)
RJP_RS06050	PWY-6113	superpathway of mycolate biosynthesis
RJP_RS06050	PWY-6282	palmitoleate biosynthesis I (from (5Z)-dodec-5-enoate)
RJP_RS06050	PWY-6519	8-amino-7-oxononanoate biosynthesis I
RJP_RS06050	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
RJP_RS06050	PWY-7663	gondoate biosynthesis (anaerobic)
RJP_RS06050	PWY-7664	oleate biosynthesis IV (anaerobic)
RJP_RS06050	PWYG-321	mycolate biosynthesis
RJP_RS06085	PWY-7221	guanosine ribonucleotides <i>de novo</i> biosynthesis
RJP_RS06125	PWY-4381	fatty acid biosynthesis initiation I
RJP_RS06150	PWY-5041	<i>S</i>-adenosyl-L-methionine cycle II
RJP_RS06150	PWY-5912	2'-deoxymugineic acid phytosiderophore biosynthesis
RJP_RS06155	PWY-5041	<i>S</i>-adenosyl-L-methionine cycle II
RJP_RS06155	PWY-5912	2'-deoxymugineic acid phytosiderophore biosynthesis
RJP_RS06185	PWY-7346	UDP-&alpha;-D-glucuronate biosynthesis (from UDP-glucose)
RJP_RS06205	PWY-6281	L-selenocysteine biosynthesis II (archaea and eukaryotes)
RJP_RS06300	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
RJP_RS06310	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
RJP_RS06320	PWY-5046	2-oxoisovalerate decarboxylation to isobutanoyl-CoA
RJP_RS06320	PWY-5084	2-oxoglutarate decarboxylation to succinyl-CoA
RJP_RS06480	PWY-5855	ubiquinol-7 biosynthesis (prokaryotic)
RJP_RS06480	PWY-5856	ubiquinol-9 biosynthesis (prokaryotic)
RJP_RS06480	PWY-5857	ubiquinol-10 biosynthesis (prokaryotic)
RJP_RS06480	PWY-6708	ubiquinol-8 biosynthesis (prokaryotic)
RJP_RS06480	PWY-6978	plastoquinol-9 biosynthesis II
RJP_RS06520	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
RJP_RS06520	PWY-6470	peptidoglycan biosynthesis V (&beta;-lactam resistance)
RJP_RS06520	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
RJP_RS06640	PWY-5189	tetrapyrrole biosynthesis II (from glycine)
RJP_RS06640	PWY-7536	2-amino-3-hydroxycyclopent-2-enone biosynthesis
RJP_RS06905	PWY-6987	lipoate biosynthesis and incorporation III (Bacillus)
RJP_RS06905	PWY-7382	lipoate biosynthesis and incorporation (pyruvate dehydrogenase and oxoglutarate dehydrogenase, yeast)
RJP_RS06960	PWY-5531	chlorophyllide <i>a</i> biosynthesis II (anaerobic)
RJP_RS06960	PWY-7159	chlorophyllide <i>a</i> biosynthesis III (aerobic, light independent)
RJP_RS06990	PWY-5531	chlorophyllide <i>a</i> biosynthesis II (anaerobic)
RJP_RS06990	PWY-7159	chlorophyllide <i>a</i> biosynthesis III (aerobic, light independent)
