RJP_RS00015 PF03618 RJP_RS00015 RJP_RS00020 PF00085 Thioredoxin RJP_RS00025 PF00005 ABC transporter RJP_RS00030 PF01061 RJP_RS00030 RJP_RS00035 PF07992 Pyridine nucleotide-disulphide oxidoreductase RJP_RS00040 PF02452 PemK-like protein RJP_RS00045 PF00132 Bacterial transferase hexapeptide (six repeats) RJP_RS00045 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 RJP_RS00050 PF07977 FabA-like domain RJP_RS00055 PF00132 Bacterial transferase hexapeptide (six repeats) RJP_RS00055 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD RJP_RS00090 PF01207 Dihydrouridine synthase (Dus) RJP_RS00100 PF02367 Uncharacterised P-loop hydrolase UPF0079 RJP_RS00105 PF01297 Periplasmic solute binding protein family RJP_RS00110 PF01743 Poly A polymerase head domain RJP_RS00110 PF12627 Probable RNA and SrmB- binding site of polymerase A RJP_RS00130 PF03797 Autotransporter beta-domain RJP_RS00155 PF13401 AAA domain RJP_RS00170 PF00430 ATP synthase B/B' CF(0) RJP_RS00175 PF02326 RJP_RS00175 RJP_RS00180 PF00137 ATP synthase subunit C RJP_RS00185 PF00119 ATP synthase A chain RJP_RS00190 PF09527 RJP_RS00190 RJP_RS00195 PF13462 Thioredoxin RJP_RS00200 PF02559 CarD-like/TRCF domain RJP_RS00205 PF10119 RJP_RS00205 RJP_RS00205 PF13847 Methyltransferase domain RJP_RS00210 PF02463 RecF/RecN/SMC N terminal domain RJP_RS00215 PF14518 Iron-containing redox enzyme RJP_RS00225 PF00186 Dihydrofolate reductase RJP_RS00235 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) RJP_RS00265 PF02630 SCO1/SenC RJP_RS00270 PF02622 Uncharacterized ACR, COG1678 RJP_RS00275 PF02674 RJP_RS00275 RJP_RS00295 PF03797 Autotransporter beta-domain RJP_RS00300 PF10871 RJP_RS00300 RJP_RS00320 PF00106 short chain dehydrogenase RJP_RS00345 PF00004 ATPase family associated with various cellular activities (AAA) RJP_RS00345 PF02861 Clp amino terminal domain RJP_RS00345 PF07724 AAA domain (Cdc48 subfamily) RJP_RS00345 PF10431 C-terminal, D2-small domain, of ClpB protein RJP_RS00355 PF00814 Glycoprotease family RJP_RS00360 PF00487 RJP_RS00360 RJP_RS00365 PF00486 Transcriptional regulatory protein, C terminal RJP_RS00370 PF01250 Ribosomal protein S6 RJP_RS00375 PF01084 Ribosomal protein S18 RJP_RS00380 PF01281 Ribosomal protein L9, N-terminal domain RJP_RS00380 PF03948 Ribosomal protein L9, C-terminal domain RJP_RS00385 PF01171 PP-loop family RJP_RS00390 PF00004 ATPase family associated with various cellular activities (AAA) RJP_RS00390 PF01434 Peptidase family M41 RJP_RS00390 PF06480 FtsH Extracellular RJP_RS00395 PF00145 C-5 cytosine-specific DNA methylase RJP_RS00410 PF13085 2Fe-2S iron-sulfur cluster binding domain RJP_RS00410 PF13534 4Fe-4S dicluster domain RJP_RS00420 PF02636 Putative S-adenosyl-L-methionine-dependent methyltransferase RJP_RS00425 PF01790 RJP_RS00425 RJP_RS00430 PF00924 Mechanosensitive ion channel RJP_RS00435 PF02096 60Kd inner membrane protein RJP_RS00435 PF14849 YidC periplasmic domain RJP_RS00440 PF01066 CDP-alcohol phosphatidyltransferase RJP_RS00455 PF13489 Methyltransferase domain RJP_RS00470 PF09992 Predicted periplasmic protein (DUF2233) RJP_RS00475 PF01327 Polypeptide deformylase RJP_RS00480 PF03219 RJP_RS00480 RJP_RS00485 PF07690 Major Facilitator Superfamily RJP_RS00490 PF00334 Nucleoside diphosphate kinase RJP_RS00495 PF01134 Glucose inhibited division protein A RJP_RS00495 PF13932 GidA associated domain 3 RJP_RS00500 PF02527 rRNA small subunit methyltransferase G RJP_RS00505 PF13614 AAA domain RJP_RS00510 PF02195 ParB-like nuclease domain RJP_RS00515 PF00005 ABC transporter RJP_RS00515 PF12848 ABC transporter RJP_RS00520 PF10878 RJP_RS00520 RJP_RS00525 PF00793 DAHP synthetase I family RJP_RS00545 PF01521 Iron-sulphur cluster biosynthesis RJP_RS00550 PF01966 HD domain RJP_RS00550 PF13286 Phosphohydrolase-associated domain RJP_RS00555 PF00750 tRNA synthetases class I (R) RJP_RS00555 PF03485 Arginyl tRNA synthetase N terminal domain RJP_RS00555 PF05746 DALR anticodon binding domain RJP_RS00560 PF05036 Sporulation related domain RJP_RS00565 PF00521 DNA gyrase/topoisomerase IV, subunit A RJP_RS00565 PF03989 DNA gyrase C-terminal domain, beta-propeller RJP_RS00575 PF13609 Gram-negative porin RJP_RS00580 PF00692 dUTPase RJP_RS00585 PF02556 Preprotein translocase subunit SecB RJP_RS00590 PF00072 Response regulator receiver domain RJP_RS00590 PF00486 Transcriptional regulatory protein, C terminal RJP_RS00595 PF14489 QueF-like protein RJP_RS00595 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term RJP_RS00600 PF06242 RJP_RS00600 RJP_RS00605 PF02233 NAD(P) transhydrogenase beta subunit RJP_RS00610 PF03922 OmpW family RJP_RS00615 PF00892 EamA-like transporter family RJP_RS00620 PF00083 Sugar (and other) transporter RJP_RS00620 PF07690 Major Facilitator Superfamily RJP_RS00630 PF03840 Preprotein translocase SecG subunit RJP_RS00640 PF03797 Autotransporter beta-domain RJP_RS00645 PF01406 tRNA synthetases class I (C) catalytic domain RJP_RS00645 PF09190 DALR domain RJP_RS00650 PF00318 Ribosomal protein S2 RJP_RS00655 PF00889 Elongation factor TS RJP_RS00665 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) RJP_RS00670 PF04028 RJP_RS00670 RJP_RS00675 PF00155 Aminotransferase class I and II RJP_RS00680 PF06769 Plasmid encoded toxin Txe RJP_RS00685 PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system RJP_RS00690 PF13489 Methyltransferase domain RJP_RS00695 PF04333 RJP_RS00695 RJP_RS00700 PF05494 Toluene tolerance, Ttg2 RJP_RS00720 PF00842 Alanine racemase, C-terminal domain RJP_RS00720 PF01168 Alanine racemase, N-terminal domain RJP_RS00725 PF02405 RJP_RS00725 RJP_RS00730 PF00005 ABC transporter RJP_RS00750 PF00830 Ribosomal L28 family RJP_RS00755 PF01197 Ribosomal protein L31 RJP_RS00765 PF01926 50S ribosome-binding GTPase RJP_RS00770 PF00696 Amino acid kinase family RJP_RS00775 PF05101 RJP_RS00775 RJP_RS00780 PF03135 RJP_RS00780 RJP_RS00785 PF04610 RJP_RS00785 RJP_RS00790 PF04610 RJP_RS00790 RJP_RS00795 PF04610 RJP_RS00795 RJP_RS00800 PF04610 RJP_RS00800 RJP_RS00805 PF04610 RJP_RS00805 RJP_RS00810 PF01515 Phosphate acetyl/butaryl transferase RJP_RS00830 PF01746 tRNA (Guanine-1)-methyltransferase RJP_RS00835 PF01245 Ribosomal protein L19 RJP_RS00840 PF10073 RJP_RS00840 RJP_RS00845 PF02355 Protein export membrane protein RJP_RS00845 PF07549 SecD/SecF GG Motif RJP_RS00850 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit RJP_RS00850 PF10531 SLBB domain RJP_RS00850 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region RJP_RS00855 PF00717 Peptidase S24-like RJP_RS00860 PF00035 Double-stranded RNA binding motif RJP_RS00860 PF14622 Ribonuclease-III-like RJP_RS00865 PF01926 50S ribosome-binding GTPase RJP_RS00865 PF07650 KH domain RJP_RS00870 PF02075 Crossover junction endodeoxyribonuclease RuvC RJP_RS00875 PF00588 SpoU rRNA Methylase family RJP_RS00880 PF08780 Nucleotidyltransferase substrate binding protein like RJP_RS00885 PF01909 Nucleotidyltransferase domain RJP_RS00890 PF06258 RJP_RS00890 RJP_RS00895 PF10609 ParA/MinD ATPase like RJP_RS00900 PF01145 SPFH domain / Band 7 family RJP_RS00905 PF01145 SPFH domain / Band 7 family RJP_RS00910 PF13180 PDZ domain RJP_RS00910 PF13365 Trypsin-like peptidase domain RJP_RS00915 PF00581 Rhodanese-like domain RJP_RS00920 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit RJP_RS00925 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit RJP_RS00930 PF00890 FAD binding domain RJP_RS00930 PF02910 Fumarate reductase flavoprotein C-term RJP_RS00935 PF00528 Binding-protein-dependent transport system inner membrane component RJP_RS00945 PF00177 Ribosomal protein S7p/S5e RJP_RS00950 PF00009 Elongation factor Tu GTP binding domain RJP_RS00950 PF00679 Elongation factor G C-terminus RJP_RS00950 PF03144 Elongation factor Tu domain 2 RJP_RS00950 PF03764 Elongation factor G, domain IV RJP_RS00950 PF14492 Elongation Factor G, domain II RJP_RS00960 PF00584 SecE/Sec61-gamma subunits of protein translocation complex RJP_RS00965 PF00467 KOW motif RJP_RS00965 PF02357 Transcription termination factor nusG RJP_RS00970 PF00298 Ribosomal protein L11, RNA binding domain RJP_RS00970 PF03946 Ribosomal protein L11, N-terminal domain RJP_RS00975 PF00687 Ribosomal protein L1p/L10e family RJP_RS00980 PF00466 Ribosomal protein L10 RJP_RS00985 PF00542 Ribosomal protein L7/L12 C-terminal domain RJP_RS00985 PF16320 RJP_RS00985 RJP_RS00990 PF00562 RNA polymerase Rpb2, domain 6 RJP_RS00990 PF04560 RNA polymerase Rpb2, domain 7 RJP_RS00990 PF04561 RNA polymerase Rpb2, domain 2 RJP_RS00990 PF04563 RNA polymerase beta subunit RJP_RS00990 PF04565 RNA polymerase Rpb2, domain 3 RJP_RS00990 PF10385 RNA polymerase beta subunit external 1 domain RJP_RS00995 PF00623 RNA polymerase Rpb1, domain 2 RJP_RS00995 PF04983 RNA polymerase Rpb1, domain 3 RJP_RS00995 PF04997 RNA polymerase Rpb1, domain 1 RJP_RS00995 PF04998 RNA polymerase Rpb1, domain 5 RJP_RS00995 PF05000 RNA polymerase Rpb1, domain 4 RJP_RS01005 PF00883 Cytosol aminopeptidase family, catalytic domain RJP_RS01005 PF02789 Cytosol aminopeptidase family, N-terminal domain RJP_RS01010 PF09140 ATPase MipZ RJP_RS01015 PF11304 RJP_RS01015 RJP_RS01020 PF00152 tRNA synthetases class II (D, K and N) RJP_RS01020 PF01336 OB-fold nucleic acid binding domain RJP_RS01020 PF02938 GAD domain RJP_RS01030 PF01027 Inhibitor of apoptosis-promoting Bax1 RJP_RS01035 PF01113 Dihydrodipicolinate reductase, N-terminus RJP_RS01035 PF05173 Dihydrodipicolinate reductase, C-terminus RJP_RS01040 PF01613 Flavin reductase like domain RJP_RS01045 PF00497 Bacterial extracellular solute-binding proteins, family 3 RJP_RS01050 PF02637 GatB domain RJP_RS01050 PF02934 GatB/GatE catalytic domain RJP_RS01055 PF01425 Amidase RJP_RS01060 PF02686 Glu-tRNAGln amidotransferase C subunit RJP_RS01065 PF01765 Ribosome recycling factor RJP_RS01070 PF00696 Amino acid kinase family RJP_RS01075 PF01899 RJP_RS01075 RJP_RS01080 PF07690 Major Facilitator Superfamily RJP_RS01085 PF10879 RJP_RS01085 RJP_RS01105 PF01103 Surface antigen RJP_RS01105 PF07244 Surface antigen variable number repeat RJP_RS01110 PF02163 Peptidase family M50 RJP_RS01110 PF13180 PDZ domain RJP_RS01115 PF01029 NusB family RJP_RS01120 PF01728 FtsJ-like methyltransferase RJP_RS01135 PF03364 Polyketide cyclase / dehydrase and lipid transport RJP_RS01140 PF07896 Protein of unknown function (DUF1674) RJP_RS01145 PF04452 RNA methyltransferase RJP_RS01150 PF04070 RJP_RS01150 RJP_RS01155 PF00873 AcrB/AcrD/AcrF family RJP_RS01160 PF00216 Bacterial DNA-binding protein RJP_RS01165 PF13177 DNA polymerase III, delta subunit RJP_RS01170 PF00448 SRP54-type protein, GTPase domain RJP_RS01170 PF02881 SRP54-type protein, helical bundle domain RJP_RS01170 PF02978 Signal peptide binding domain RJP_RS01180 PF00326 Prolyl oligopeptidase family RJP_RS01200 PF04055 Radical SAM superfamily RJP_RS01200 PF06969 HemN C-terminal domain RJP_RS01230 PF00375 Sodium:dicarboxylate symporter family RJP_RS01235 PF03091 CutA1 divalent ion tolerance protein RJP_RS01240 PF01242 6-pyruvoyl tetrahydropterin synthase RJP_RS01245 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) RJP_RS01245 PF00364 Biotin-requiring enzyme RJP_RS01245 PF02817 e3 binding domain RJP_RS01250 PF00676 Dehydrogenase E1 component RJP_RS01250 PF02779 Transketolase, pyrimidine binding domain RJP_RS01250 PF16078 RJP_RS01250 RJP_RS01250 PF16870 RJP_RS01250 RJP_RS01255 PF02074 Carboxypeptidase Taq (M32) metallopeptidase RJP_RS01260 PF02463 RecF/RecN/SMC N terminal domain RJP_RS01265 PF13525 Outer membrane lipoprotein RJP_RS01275 PF00226 DnaJ domain RJP_RS01275 PF00684 DnaJ central domain RJP_RS01275 PF01556 DnaJ C terminal domain RJP_RS01280 PF00012 Hsp70 protein RJP_RS01285 PF13180 PDZ domain RJP_RS01285 PF13365 Trypsin-like peptidase domain RJP_RS01305 PF03232 RJP_RS01305 RJP_RS01310 PF00510 Cytochrome c oxidase subunit III RJP_RS01315 PF04956 RJP_RS01315 RJP_RS01325 PF00132 Bacterial transferase hexapeptide (six repeats) RJP_RS01325 PF14602 Hexapeptide repeat of succinyl-transferase RJP_RS01325 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal RJP_RS01340 PF00905 Penicillin binding protein transpeptidase domain RJP_RS01340 PF00912 Transglycosylase RJP_RS01340 PF06832 RJP_RS01340 RJP_RS01385 PF00582 Universal stress protein family RJP_RS01390 PF16868 RJP_RS01390 RJP_RS01400 PF00111 2Fe-2S iron-sulfur cluster binding domain RJP_RS01405 PF00012 Hsp70 protein RJP_RS01410 PF00226 DnaJ domain RJP_RS01415 PF01351 Ribonuclease HII RJP_RS01420 PF00271 Helicase conserved C-terminal domain RJP_RS01420 PF02151 UvrB/uvrC motif RJP_RS01420 PF04851 Type III restriction enzyme, res subunit RJP_RS01420 PF12344 Ultra-violet resistance protein B RJP_RS01425 PF00462 Glutaredoxin RJP_RS01430 PF00005 ABC transporter RJP_RS01430 PF00664 ABC transporter transmembrane region RJP_RS01435 PF00521 DNA gyrase/topoisomerase IV, subunit A RJP_RS01435 PF03989 DNA gyrase C-terminal domain, beta-propeller RJP_RS01450 PF00375 Sodium:dicarboxylate symporter family RJP_RS01455 PF00375 Sodium:dicarboxylate symporter family RJP_RS01465 PF04588 Hypoxia induced protein conserved region RJP_RS01470 PF04384 Iron-sulphur cluster assembly RJP_RS01475 PF01327 Polypeptide deformylase RJP_RS01480 PF00551 Formyl transferase RJP_RS01480 PF02911 Formyl transferase, C-terminal domain RJP_RS01510 PF03969 AFG1-like ATPase RJP_RS01520 PF02547 Queuosine biosynthesis protein RJP_RS01525 PF12796 Ankyrin repeats (3 copies) RJP_RS01540 PF00005 ABC transporter RJP_RS01540 PF00664 ABC transporter transmembrane region RJP_RS01545 PF10877 RJP_RS01545 RJP_RS01550 PF01654 RJP_RS01550 RJP_RS01555 PF02322 RJP_RS01555 RJP_RS01560 PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system RJP_RS01565 PF06769 Plasmid encoded toxin Txe RJP_RS01570 PF00535 Glycosyl transferase family 2 RJP_RS01575 PF00675 Insulinase (Peptidase family M16) RJP_RS01575 PF05193 Peptidase M16 inactive domain RJP_RS01580 PF01259 SAICAR synthetase RJP_RS01590 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) RJP_RS01590 PF02824 TGS domain RJP_RS01590 PF03129 Anticodon binding domain RJP_RS01590 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain RJP_RS01610 PF00005 ABC transporter RJP_RS01615 PF00005 ABC transporter RJP_RS01630 PF10859 RJP_RS01630 RJP_RS01640 PF02321 Outer membrane efflux protein RJP_RS01645 PF10691 RJP_RS01645 RJP_RS01660 PF00204 DNA gyrase B RJP_RS01660 PF00986 DNA gyrase B subunit, carboxyl terminus RJP_RS01660 PF01751 Toprim domain RJP_RS01660 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RJP_RS01665 PF00595 PDZ domain (Also known as DHR or GLGF) RJP_RS01665 PF03572 Peptidase family S41 RJP_RS01670 PF00512 His Kinase A (phospho-acceptor) domain RJP_RS01670 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RJP_RS01675 PF13174 Tetratricopeptide repeat RJP_RS01675 PF13432 Tetratricopeptide repeat RJP_RS01680 PF10858 RJP_RS01680 RJP_RS01685 PF13360 PQQ-like domain RJP_RS01690 PF00572 Ribosomal protein L13 RJP_RS01695 PF00380 Ribosomal protein S9/S16 RJP_RS01710 PF01427 D-ala-D-ala dipeptidase RJP_RS01725 PF00293 NUDIX domain RJP_RS01730 PF00072 Response regulator receiver domain RJP_RS01730 PF00990 GGDEF domain RJP_RS01735 PF01132 Elongation factor P (EF-P) OB domain RJP_RS01735 PF08207 Elongation factor P (EF-P) KOW-like domain RJP_RS01735 PF09285 Elongation factor P, C-terminal RJP_RS01740 PF00459 Inositol monophosphatase family RJP_RS01745 PF11020 RJP_RS01745 RJP_RS01750 PF02666 RJP_RS01750 RJP_RS01755 PF01066 CDP-alcohol phosphatidyltransferase RJP_RS01755 PF08009 RJP_RS01755 RJP_RS01760 PF13533 Biotin-lipoyl like RJP_RS01760 PF16576 RJP_RS01760 RJP_RS01765 PF12784 RJP_RS01765 RJP_RS01775 PF01722 BolA-like protein RJP_RS01780 PF00563 EAL domain RJP_RS01785 PF01225 Mur ligase family, catalytic domain RJP_RS01785 PF02875 Mur ligase family, glutamate ligase domain RJP_RS01785 PF08245 Mur ligase middle domain RJP_RS01790 PF01565 FAD binding domain RJP_RS01790 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain RJP_RS01795 PF01820 D-ala D-ala ligase N-terminus RJP_RS01795 PF07478 D-ala D-ala ligase C-terminus RJP_RS01800 PF03799 Cell division protein FtsQ RJP_RS01800 PF08478 POTRA domain, FtsQ-type RJP_RS01805 PF02491 SHS2 domain inserted in FTSA RJP_RS01805 PF14450 Cell division protein FtsA RJP_RS01810 PF01957 NfeD-like C-terminal, partner-binding RJP_RS01815 PF00034 Cytochrome c RJP_RS01825 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase RJP_RS01835 PF00575 S1 RNA binding domain RJP_RS01835 PF10150 Ribonuclease E/G family RJP_RS01840 PF02628 RJP_RS01840 RJP_RS01845 PF00849 RNA pseudouridylate synthase RJP_RS01845 PF01479 S4 domain RJP_RS01850 PF00144 Beta-lactamase RJP_RS01855 PF03372 Endonuclease/Exonuclease/phosphatase family RJP_RS01860 PF00676 Dehydrogenase E1 component RJP_RS01865 PF02779 Transketolase, pyrimidine binding domain RJP_RS01865 PF02780 Transketolase, C-terminal domain RJP_RS01870 PF00009 Elongation factor Tu GTP binding domain RJP_RS01870 PF00679 Elongation factor G C-terminus RJP_RS01870 PF03144 Elongation factor Tu domain 2 RJP_RS01885 PF03938 Outer membrane protein (OmpH-like) RJP_RS01890 PF00180 Isocitrate/isopropylmalate dehydrogenase RJP_RS01895 PF03334 RJP_RS01895 RJP_RS01900 PF04039 RJP_RS01900 RJP_RS01900 PF13244 RJP_RS01900 RJP_RS01905 PF03379 RJP_RS01905 RJP_RS01910 PF10875 RJP_RS01910 RJP_RS01915 PF00355 Rieske [2Fe-2S] domain RJP_RS01915 PF10399 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal RJP_RS01920 PF00032 Cytochrome b(C-terminal)/b6/petD RJP_RS01920 PF00033 Cytochrome b(N-terminal)/b6/petB RJP_RS01930 PF02167 Cytochrome C1 family RJP_RS01940 PF00011 Hsp20/alpha crystallin family RJP_RS01950 PF06250 RJP_RS01950 RJP_RS01955 PF06250 RJP_RS01955 RJP_RS01960 PF06250 RJP_RS01960 RJP_RS01965 PF00472 RF-1 domain RJP_RS01965 PF03462 PCRF domain RJP_RS01970 PF00009 Elongation factor Tu GTP binding domain RJP_RS01970 PF00679 Elongation factor G C-terminus RJP_RS01970 PF03144 Elongation factor Tu domain 2 RJP_RS01970 PF06421 GTP-binding protein LepA C-terminus RJP_RS02040 PF13328 HD domain RJP_RS02050 PF01098 RJP_RS02050 RJP_RS02055 PF00326 Prolyl oligopeptidase family RJP_RS02055 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain RJP_RS02060 PF00361 NADH-Ubiquinone/plastoquinone (complex I), various chains RJP_RS02065 PF01850 PIN domain RJP_RS02075 PF00361 NADH-Ubiquinone/plastoquinone (complex I), various chains RJP_RS02080 PF00361 NADH-Ubiquinone/plastoquinone (complex I), various chains RJP_RS02085 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L RJP_RS02090 PF03524 Conjugal transfer protein RJP_RS02100 PF10913 RJP_RS02100 RJP_RS02105 PF04335 VirB8 protein RJP_RS02110 PF03524 Conjugal transfer protein RJP_RS02115 PF03743 Bacterial conjugation TrbI-like protein RJP_RS02120 PF00437 Type II/IV secretion system protein RJP_RS02125 PF02534 Type IV secretory system Conjugative DNA transfer RJP_RS02130 PF02541 Ppx/GppA phosphatase family RJP_RS02145 PF04860 Phage portal protein RJP_RS02155 PF11019 RJP_RS02155 RJP_RS02160 PF11019 RJP_RS02160 RJP_RS02165 PF00459 Inositol monophosphatase family RJP_RS02170 PF00488 MutS domain V RJP_RS02170 PF01624 MutS domain I RJP_RS02170 PF05188 MutS domain II RJP_RS02170 PF05190 MutS family domain IV RJP_RS02170 PF05192 MutS domain III RJP_RS02175 PF02502 Ribose/Galactose Isomerase RJP_RS02180 PF01551 Peptidase family M23 RJP_RS02185 PF01863 Protein of unknown function DUF45 RJP_RS02190 PF02511 Thymidylate synthase complementing protein RJP_RS02195 PF04052 TolB amino-terminal domain RJP_RS02195 PF07676 WD40-like Beta Propeller Repeat RJP_RS02200 PF00140 Sigma-70 factor, region 1 RJP_RS02200 PF04542 Sigma-70 region 2 RJP_RS02200 PF04545 Sigma-70, region 4 RJP_RS02205 PF04442 Cytochrome c oxidase assembly protein CtaG/Cox11 RJP_RS02215 PF03054 tRNA methyl transferase RJP_RS02220 PF13520 Amino acid permease RJP_RS02225 PF03129 Anticodon binding domain RJP_RS02225 PF13393 Histidyl-tRNA synthetase RJP_RS02230 PF00005 ABC transporter RJP_RS02235 PF12848 ABC transporter RJP_RS02240 PF00005 ABC transporter RJP_RS02275 PF01618 RJP_RS02275 RJP_RS02280 PF02472 Biopolymer transport protein ExbD/TolR RJP_RS02295 PF13328 HD domain RJP_RS02300 PF07690 Major Facilitator Superfamily RJP_RS02305 PF13437 HlyD family secretion protein RJP_RS02305 PF13533 Biotin-lipoyl like RJP_RS02310 PF00005 ABC transporter RJP_RS02310 PF00664 ABC transporter transmembrane region RJP_RS02315 PF01118 Semialdehyde dehydrogenase, NAD binding domain RJP_RS02315 PF02774 Semialdehyde dehydrogenase, dimerisation domain RJP_RS02320 PF01230 HIT domain RJP_RS02330 PF00227 Proteasome subunit RJP_RS02335 PF00004 ATPase family associated with various cellular activities (AAA) RJP_RS02335 PF07724 AAA domain (Cdc48 subfamily) RJP_RS02335 PF10431 C-terminal, D2-small domain, of ClpB protein RJP_RS02345 PF01078 Magnesium chelatase, subunit ChlI RJP_RS02355 PF12784 RJP_RS02355 RJP_RS02365 PF01371 Trp repressor protein RJP_RS02370 PF02684 RJP_RS02370 RJP_RS02380 PF02618 YceG-like family RJP_RS02385 PF01491 Frataxin-like domain RJP_RS02395 PF11019 RJP_RS02395 RJP_RS02410 PF00749 tRNA synthetases class I (E and Q), catalytic domain RJP_RS02415 PF01131 DNA topoisomerase RJP_RS02415 PF01396 RJP_RS02415 RJP_RS02415 PF01751 Toprim domain RJP_RS02415 PF13368 RJP_RS02415 RJP_RS02425 PF00578 AhpC/TSA family RJP_RS02425 PF10417 C-terminal domain of 1-Cys peroxiredoxin RJP_RS02430 PF01145 SPFH domain / Band 7 family RJP_RS02430 PF16200 RJP_RS02430 RJP_RS02440 PF00884 Sulfatase RJP_RS02440 PF08019 RJP_RS02440 RJP_RS02445 PF03652 Uncharacterised protein family (UPF0081) RJP_RS02450 PF01381 Helix-turn-helix RJP_RS02455 PF04321 RmlD substrate binding domain RJP_RS02460 PF02719 Polysaccharide biosynthesis protein RJP_RS02460 PF08485 Polysaccharide biosynthesis protein C-terminal RJP_RS02465 PF02350 UDP-N-acetylglucosamine 2-epimerase RJP_RS02475 PF13649 Methyltransferase domain RJP_RS02480 PF00535 Glycosyl transferase family 2 RJP_RS02485 PF13533 Biotin-lipoyl like RJP_RS02490 PF11019 RJP_RS02490 RJP_RS02495 PF00561 alpha/beta hydrolase fold RJP_RS02500 PF00534 Glycosyl transferases group 1 RJP_RS02500 PF13439 Glycosyltransferase Family 4 RJP_RS02520 PF00163 Ribosomal protein S4/S9 N-terminal domain RJP_RS02520 PF01479 S4 domain RJP_RS02525 PF01040 UbiA prenyltransferase family RJP_RS02535 PF14328 RJP_RS02535 RJP_RS02545 PF05170 RJP_RS02545 RJP_RS02550 PF01782 RimM N-terminal domain RJP_RS02550 PF05239 PRC-barrel domain RJP_RS02555 PF13502 RJP_RS02555 RJP_RS02560 PF02609 Exonuclease VII small subunit RJP_RS02570 PF12441 RJP_RS02570 RJP_RS02580 PF02245 Methylpurine-DNA glycosylase (MPG) RJP_RS02585 PF01809 RJP_RS02585 RJP_RS02590 PF01257 Thioredoxin-like [2Fe-2S] ferredoxin RJP_RS02595 PF01541 GIY-YIG catalytic domain RJP_RS02600 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit RJP_RS02605 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit RJP_RS02610 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit RJP_RS02615 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 RJP_RS02620 PF04932 RJP_RS02620 RJP_RS02625 PF09923 RJP_RS02625 RJP_RS02645 PF00589 Phage integrase family RJP_RS02645 PF02899 Phage integrase, N-terminal SAM-like domain RJP_RS02660 PF13561 Enoyl-(Acyl carrier protein) reductase RJP_RS02665 PF00795 Carbon-nitrogen hydrolase RJP_RS02670 PF01471 Putative peptidoglycan binding domain RJP_RS02670 PF01510 N-acetylmuramoyl-L-alanine amidase RJP_RS02675 PF04392 ABC transporter substrate binding protein RJP_RS02680 PF02653 RJP_RS02680 RJP_RS02685 PF00005 ABC transporter RJP_RS02710 PF01921 tRNA synthetases class I (K) RJP_RS02715 PF03547 RJP_RS02715 RJP_RS02720 PF00390 Malic enzyme, N-terminal domain RJP_RS02720 PF01515 Phosphate acetyl/butaryl transferase RJP_RS02720 PF03949 Malic enzyme, NAD binding domain RJP_RS02730 PF01850 PIN domain RJP_RS02735 PF04014 Antidote-toxin recognition MazE RJP_RS02740 PF07690 Major Facilitator Superfamily RJP_RS02770 PF00056 lactate/malate dehydrogenase, NAD binding domain RJP_RS02770 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain RJP_RS02785 PF03219 RJP_RS02785 RJP_RS02790 PF00117 Glutamine amidotransferase class-I RJP_RS02790 PF06418 CTP synthase N-terminus RJP_RS02795 PF02348 Cytidylyltransferase RJP_RS02815 PF00115 Cytochrome C and Quinol oxidase polypeptide I RJP_RS02820 PF01227 GTP cyclohydrolase I RJP_RS02825 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) RJP_RS02825 PF03129 Anticodon binding domain RJP_RS02830 PF02661 Fic/DOC family RJP_RS02840 PF01330 RuvA N terminal domain RJP_RS02840 PF07499 RuvA, C-terminal domain RJP_RS02840 PF14520 Helix-hairpin-helix domain RJP_RS02850 PF05491 Holliday junction DNA helicase ruvB C-terminus RJP_RS02850 PF05496 Holliday junction DNA helicase ruvB N-terminus RJP_RS02855 PF00005 ABC transporter RJP_RS02855 PF00664 ABC transporter transmembrane region RJP_RS02860 PF07690 Major Facilitator Superfamily RJP_RS02865 PF00768 D-alanyl-D-alanine carboxypeptidase RJP_RS02870 PF03330 Rare lipoprotein A (RlpA)-like double-psi beta-barrel RJP_RS02875 PF04972 BON domain RJP_RS02880 PF04279 RJP_RS02880 RJP_RS02885 PF03239 RJP_RS02885 RJP_RS02895 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase RJP_RS02900 PF00775 Dioxygenase RJP_RS02905 PF08534 Redoxin RJP_RS02910 PF01343 Peptidase family S49 RJP_RS02915 PF00692 dUTPase RJP_RS02920 PF01464 Transglycosylase SLT domain RJP_RS02930 PF02016 LD-carboxypeptidase RJP_RS02935 PF12705 PD-(D/E)XK nuclease superfamily RJP_RS02945 PF07722 Peptidase C26 RJP_RS02950 PF00115 Cytochrome C and Quinol oxidase polypeptide I RJP_RS02960 PF00116 Cytochrome C oxidase subunit II, periplasmic domain RJP_RS02960 PF02790 Cytochrome C oxidase subunit II, transmembrane domain RJP_RS02970 PF01551 Peptidase family M23 RJP_RS02975 PF01252 RJP_RS02975 RJP_RS02980 PF08245 Mur ligase middle domain RJP_RS02985 PF01098 RJP_RS02985 RJP_RS02990 PF03033 Glycosyltransferase family 28 N-terminal domain RJP_RS02990 PF04101 Glycosyltransferase family 28 C-terminal domain RJP_RS03005 PF00873 AcrB/AcrD/AcrF family RJP_RS03020 PF00873 AcrB/AcrD/AcrF family RJP_RS03030 PF00873 AcrB/AcrD/AcrF family RJP_RS03045 PF02321 Outer membrane efflux protein RJP_RS03050 PF02321 Outer membrane efflux protein RJP_RS03055 PF00534 Glycosyl transferases group 1 RJP_RS03055 PF13439 Glycosyltransferase Family 4 RJP_RS03060 PF12784 RJP_RS03060 RJP_RS03065 PF01678 Diaminopimelate epimerase RJP_RS03070 PF00919 Uncharacterized protein family UPF0004 RJP_RS03070 PF04055 Radical SAM superfamily RJP_RS03075 PF01409 tRNA synthetases class II core domain (F) RJP_RS03075 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain RJP_RS03080 PF01588 Putative tRNA binding domain RJP_RS03080 PF03147 Ferredoxin-fold anticodon binding domain RJP_RS03080 PF03483 B3/4 domain RJP_RS03080 PF03484 tRNA synthetase B5 domain RJP_RS03085 PF00712 DNA polymerase III beta subunit, N-terminal domain RJP_RS03085 PF02767 DNA polymerase III beta subunit, central domain RJP_RS03085 PF02768 DNA polymerase III beta subunit, C-terminal domain RJP_RS03090 PF07866 Protein of unknown function (DUF1653) RJP_RS03095 PF12100 RJP_RS03095 RJP_RS03100 PF00133 tRNA synthetases class I (I, L, M and V) RJP_RS03100 PF08264 Anticodon-binding domain of tRNA RJP_RS03100 PF13603 Leucyl-tRNA synthetase, Domain 2 RJP_RS03105 PF01612 3'-5' exonuclease RJP_RS03110 PF04977 Septum formation initiator RJP_RS03115 PF01148 Cytidylyltransferase family RJP_RS03120 PF01255 Putative undecaprenyl diphosphate synthase RJP_RS03125 PF00512 His Kinase A (phospho-acceptor) domain RJP_RS03125 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RJP_RS03130 PF00072 Response regulator receiver domain RJP_RS03130 PF00486 Transcriptional regulatory protein, C terminal RJP_RS03135 PF01063 Aminotransferase class IV RJP_RS03140 PF00701 Dihydrodipicolinate synthetase family RJP_RS03145 PF01668 SmpB protein RJP_RS03150 PF01323 DSBA-like thioredoxin domain RJP_RS03155 PF00549 CoA-ligase RJP_RS03155 PF02629 CoA binding domain RJP_RS03160 PF00549 CoA-ligase RJP_RS03160 PF08442 ATP-grasp domain RJP_RS03170 PF04014 Antidote-toxin recognition MazE RJP_RS03180 PF01292 Prokaryotic cytochrome b561 RJP_RS03185 PF00326 Prolyl oligopeptidase family RJP_RS03200 PF02033 Ribosome-binding factor A RJP_RS03210 PF06271 RJP_RS03210 RJP_RS03215 PF02132 RecR protein RJP_RS03215 PF13662 Toprim domain RJP_RS03230 PF01513 ATP-NAD kinase RJP_RS03235 PF07521 RNA-metabolising metallo-beta-lactamase RJP_RS03235 PF12706 Beta-lactamase superfamily domain RJP_RS03240 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus RJP_RS03240 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus RJP_RS03255 PF00561 alpha/beta hydrolase fold RJP_RS03260 PF07992 Pyridine nucleotide-disulphide oxidoreductase RJP_RS03275 PF00171 Aldehyde dehydrogenase family RJP_RS03285 PF00535 Glycosyl transferase family 2 RJP_RS03290 PF00580 UvrD/REP helicase N-terminal domain RJP_RS03290 PF13361 UvrD-like helicase C-terminal domain RJP_RS03305 PF00291 Pyridoxal-phosphate dependent enzyme RJP_RS03310 PF00004 ATPase family associated with various cellular activities (AAA) RJP_RS03310 PF02190 ATP-dependent protease La (LON) domain RJP_RS03310 PF05362 Lon protease (S16) C-terminal proteolytic domain RJP_RS03345 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein RJP_RS03345 PF16321 RJP_RS03345 RJP_RS03350 PF00132 Bacterial transferase hexapeptide (six repeats) RJP_RS03360 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain RJP_RS03360 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain RJP_RS03365 PF07992 Pyridine nucleotide-disulphide oxidoreductase RJP_RS03420 PF05229 RJP_RS03420 RJP_RS03430 PF00317 Ribonucleotide reductase, all-alpha domain RJP_RS03430 PF02867 Ribonucleotide reductase, barrel domain RJP_RS03445 PF00268 Ribonucleotide reductase, small chain RJP_RS03450 PF00805 Pentapeptide repeats (8 copies) RJP_RS03465 PF01715 IPP transferase RJP_RS03470 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain RJP_RS03470 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I RJP_RS03470 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II RJP_RS03470 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III RJP_RS03475 PF00005 ABC transporter RJP_RS03480 PF03968 OstA-like protein RJP_RS03485 PF06835 Lipopolysaccharide-assembly, LptC-related RJP_RS03490 PF00571 CBS domain RJP_RS03490 PF01380 SIS domain RJP_RS03495 PF00013 KH domain RJP_RS03495 PF00575 S1 RNA binding domain RJP_RS03495 PF01138 3' exoribonuclease family, domain 1 RJP_RS03495 PF03725 3' exoribonuclease family, domain 2 RJP_RS03495 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain RJP_RS03500 PF00312 Ribosomal protein S15 RJP_RS03505 PF01509 TruB family pseudouridylate synthase (N terminal domain) RJP_RS03505 PF16198 RJP_RS03505 RJP_RS03510 PF03219 RJP_RS03510 RJP_RS03515 PF12574 120 KDa Rickettsia surface antigen RJP_RS03520 PF01381 Helix-turn-helix RJP_RS03525 PF03631 RJP_RS03525 RJP_RS03530 PF00120 Glutamine synthetase, catalytic domain RJP_RS03535 PF02578 Multi-copper polyphenol oxidoreductase laccase RJP_RS03540 PF01327 Polypeptide deformylase RJP_RS03555 PF00391 PEP-utilising enzyme, mobile domain RJP_RS03555 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain RJP_RS03555 PF02896 PEP-utilising enzyme, TIM barrel domain RJP_RS03560 PF00043 Glutathione S-transferase, C-terminal domain RJP_RS03560 PF13417 Glutathione S-transferase, N-terminal domain RJP_RS03565 PF09825 RJP_RS03565 RJP_RS03570 PF02632 BioY family RJP_RS03575 PF08245 Mur ligase middle domain RJP_RS03585 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain RJP_RS03585 PF02777 Iron/manganese superoxide dismutases, C-terminal domain RJP_RS03600 PF02237 Biotin protein ligase C terminal domain RJP_RS03600 PF03099 Biotin/lipoate A/B protein ligase family RJP_RS03620 PF10097 RJP_RS03620 RJP_RS03625 PF00707 Translation initiation factor IF-3, C-terminal domain RJP_RS03625 PF05198 Translation initiation factor IF-3, N-terminal domain RJP_RS03630 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) RJP_RS03630 PF00364 Biotin-requiring enzyme RJP_RS03630 PF02817 e3 binding domain RJP_RS03635 PF00472 RF-1 domain RJP_RS03635 PF03462 PCRF domain RJP_RS03640 PF01368 DHH family RJP_RS03640 PF02272 DHHA1 domain RJP_RS03645 PF13847 Methyltransferase domain RJP_RS03650 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain RJP_RS03650 PF07497 Rho termination factor, RNA-binding domain RJP_RS03650 PF07498 Rho termination factor, N-terminal domain RJP_RS03655 PF01343 Peptidase family S49 RJP_RS03660 PF00216 Bacterial DNA-binding protein RJP_RS03675 PF03883 RJP_RS03675 RJP_RS03715 PF01381 Helix-turn-helix RJP_RS03720 PF02224 Cytidylate kinase RJP_RS03725 PF00575 S1 RNA binding domain RJP_RS03730 PF00574 Clp protease RJP_RS03745 PF01070 FMN-dependent dehydrogenase RJP_RS03770 PF12804 MobA-like NTP transferase domain RJP_RS03775 PF01709 Transcriptional regulator RJP_RS03780 PF00444 Ribosomal protein L36 RJP_RS03795 PF01464 Transglycosylase SLT domain RJP_RS03800 PF10811 RJP_RS03800 RJP_RS03820 PF02086 D12 class N6 adenine-specific DNA methyltransferase RJP_RS03840 PF08241 Methyltransferase domain RJP_RS03845 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain RJP_RS03845 PF07992 Pyridine nucleotide-disulphide oxidoreductase RJP_RS03850 PF01812 5-formyltetrahydrofolate cyclo-ligase family RJP_RS03860 PF01612 3'-5' exonuclease RJP_RS03865 PF02582 RJP_RS03865 RJP_RS03870 PF08669 Glycine cleavage T-protein C-terminal barrel domain RJP_RS03900 PF02016 LD-carboxypeptidase RJP_RS03905 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain RJP_RS03905 PF03900 Porphobilinogen deaminase, C-terminal domain RJP_RS03920 PF00579 tRNA synthetases class I (W and Y) RJP_RS03925 PF01553 Acyltransferase RJP_RS03930 PF10116 RJP_RS03930 RJP_RS03945 PF02129 X-Pro dipeptidyl-peptidase (S15 family) RJP_RS03950 PF07219 RJP_RS03950 RJP_RS03960 PF02602 Uroporphyrinogen-III synthase HemD RJP_RS03965 PF01810 RJP_RS03965 RJP_RS03975 PF07690 Major Facilitator Superfamily RJP_RS03980 PF04754 RJP_RS03980 RJP_RS03985 PF04754 RJP_RS03985 RJP_RS03995 PF01501 Glycosyl transferase family 8 RJP_RS04000 PF01501 Glycosyl transferase family 8 RJP_RS04010 PF03219 RJP_RS04010 RJP_RS04025 PF00348 Polyprenyl synthetase RJP_RS04040 PF00557 Metallopeptidase family M24 RJP_RS04040 PF01321 Creatinase/Prolidase N-terminal domain RJP_RS04040 PF16188 RJP_RS04040 RJP_RS04040 PF16189 RJP_RS04040 RJP_RS04045 PF13520 Amino acid permease RJP_RS04050 PF01476 LysM domain RJP_RS04055 PF01521 Iron-sulphur cluster biosynthesis RJP_RS04060 PF01592 NifU-like N terminal domain RJP_RS04065 PF00266 Aminotransferase class-V RJP_RS04070 PF00266 Aminotransferase class-V RJP_RS04075 PF02082 Transcriptional regulator RJP_RS04090 PF06691 RJP_RS04090 RJP_RS04095 PF04754 RJP_RS04095 RJP_RS04130 PF00361 NADH-Ubiquinone/plastoquinone (complex I), various chains RJP_RS04140 PF00490 Delta-aminolevulinic acid dehydratase RJP_RS04155 PF00270 DEAD/DEAH box helicase RJP_RS04155 PF00271 Helicase conserved C-terminal domain RJP_RS04160 PF02441 Flavoprotein RJP_RS04165 PF00772 DnaB-like helicase N terminal domain RJP_RS04165 PF03796 DnaB-like helicase C terminal domain RJP_RS04185 PF03222 Tryptophan/tyrosine permease family RJP_RS04190 PF00849 RNA pseudouridylate synthase RJP_RS04190 PF01479 S4 domain RJP_RS04200 PF03602 Conserved hypothetical protein 95 RJP_RS04205 PF13481 AAA domain RJP_RS04205 PF13541 Subunit ChlI of Mg-chelatase RJP_RS04215 PF02565 Recombination protein O C terminal RJP_RS04215 PF11967 Recombination protein O N terminal RJP_RS04220 PF00814 Glycoprotease family RJP_RS04230 PF00009 Elongation factor Tu GTP binding domain RJP_RS04230 PF04760 Translation initiation factor IF-2, N-terminal region RJP_RS04230 PF11987 Translation-initiation factor 2 RJP_RS04235 PF00575 S1 RNA binding domain RJP_RS04235 PF08529 NusA N-terminal domain RJP_RS04235 PF13184 NusA-like KH domain RJP_RS04235 PF14520 Helix-hairpin-helix domain RJP_RS04240 PF02576 Uncharacterised BCR, YhbC family COG0779 RJP_RS04255 PF02082 Transcriptional regulator RJP_RS04260 PF01728 FtsJ-like methyltransferase RJP_RS04265 PF00579 tRNA synthetases class I (W and Y) RJP_RS04275 PF12441 RJP_RS04275 RJP_RS04300 PF02371 RJP_RS04300 RJP_RS04315 PF01569 PAP2 superfamily RJP_RS04320 PF00207 Alpha-2-macroglobulin family RJP_RS04320 PF01835 MG2 domain RJP_RS04320 PF11974 Alpha-2-macroglobulin MG1 domain RJP_RS04330 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain RJP_RS04335 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain RJP_RS04365 PF01494 FAD binding domain RJP_RS04375 PF00805 Pentapeptide repeats (8 copies) RJP_RS04375 PF13599 Pentapeptide repeats (9 copies) RJP_RS04385 PF00905 Penicillin binding protein transpeptidase domain RJP_RS04385 PF03717 Penicillin-binding Protein dimerisation domain RJP_RS04400 PF00905 Penicillin binding protein transpeptidase domain RJP_RS04400 PF03717 Penicillin-binding Protein dimerisation domain RJP_RS04410 PF01795 MraW methylase family RJP_RS04415 PF02381 MraZ protein RJP_RS04425 PF00474 Sodium:solute symporter family RJP_RS04440 PF01541 GIY-YIG catalytic domain RJP_RS04440 PF02151 UvrB/uvrC motif RJP_RS04440 PF08459 UvrC Helix-hairpin-helix N-terminal RJP_RS04440 PF14520 Helix-hairpin-helix domain RJP_RS04445 PF04314 Protein of unknown function (DUF461) RJP_RS04450 PF08713 DNA alkylation repair enzyme RJP_RS04495 PF00589 Phage integrase family RJP_RS04515 PF00023 Ankyrin repeat RJP_RS04520 PF12796 Ankyrin repeats (3 copies) RJP_RS04565 PF01043 SecA preprotein cross-linking domain RJP_RS04565 PF02810 SEC-C motif RJP_RS04565 PF07516 SecA Wing and Scaffold domain RJP_RS04565 PF07517 SecA DEAD-like domain RJP_RS04570 PF13616 PPIC-type PPIASE domain RJP_RS04575 PF01648 4'-phosphopantetheinyl transferase superfamily RJP_RS04580 PF01192 RNA polymerase Rpb6 RJP_RS04585 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) RJP_RS04590 PF00204 DNA gyrase B RJP_RS04590 PF00986 DNA gyrase B subunit, carboxyl terminus RJP_RS04590 PF01751 Toprim domain RJP_RS04590 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RJP_RS04595 PF13242 HAD-hyrolase-like RJP_RS04595 PF13344 Haloacid dehalogenase-like hydrolase RJP_RS04605 PF00571 CBS domain RJP_RS04605 PF01769 Divalent cation transporter RJP_RS04605 PF03448 MgtE intracellular N domain RJP_RS04665 PF01594 RJP_RS04665 RJP_RS04670 PF01025 GrpE RJP_RS04675 PF01138 3' exoribonuclease family, domain 1 RJP_RS04675 PF03725 3' exoribonuclease family, domain 2 RJP_RS04695 PF00166 Chaperonin 10 Kd subunit RJP_RS04700 PF00118 TCP-1/cpn60 chaperonin family RJP_RS04715 PF06776 Invasion associated locus B (IalB) protein RJP_RS04720 PF00749 tRNA synthetases class I (E and Q), catalytic domain RJP_RS04725 PF13489 Methyltransferase domain RJP_RS04730 PF00950 RJP_RS04730 RJP_RS04735 PF04993 TfoX N-terminal domain RJP_RS04740 PF00501 AMP-binding enzyme RJP_RS04740 PF01553 Acyltransferase RJP_RS04740 PF07690 Major Facilitator Superfamily RJP_RS04750 PF01039 Carboxyl transferase domain RJP_RS04755 PF00289 Carbamoyl-phosphate synthase L chain, N-terminal domain RJP_RS04755 PF00364 Biotin-requiring enzyme RJP_RS04755 PF02785 Biotin carboxylase C-terminal domain RJP_RS04755 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain RJP_RS04760 PF12895 Anaphase-promoting complex, cyclosome, subunit 3 RJP_RS04775 PF00133 tRNA synthetases class I (I, L, M and V) RJP_RS04775 PF08264 Anticodon-binding domain of tRNA RJP_RS04795 PF08511 COQ9 RJP_RS04800 PF01165 Ribosomal protein S21 RJP_RS04805 PF00512 His Kinase A (phospho-acceptor) domain RJP_RS04805 PF00672 HAMP domain RJP_RS04805 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RJP_RS04835 PF01544 CorA-like Mg2+ transporter protein RJP_RS04855 PF00825 Ribonuclease P RJP_RS04860 PF00468 Ribosomal protein L34 RJP_RS04865 PF00453 Ribosomal protein L20 RJP_RS04870 PF01632 Ribosomal protein L35 RJP_RS04875 PF04055 Radical SAM superfamily RJP_RS04875 PF13394 4Fe-4S single cluster domain RJP_RS04890 PF01386 Ribosomal L25p family RJP_RS04890 PF14693 Ribosomal protein TL5, C-terminal domain RJP_RS04895 PF01195 Peptidyl-tRNA hydrolase RJP_RS04910 PF01926 50S ribosome-binding GTPase RJP_RS04910 PF06071 Protein of unknown function (DUF933) RJP_RS04920 PF07690 Major Facilitator Superfamily RJP_RS04925 PF01734 Patatin-like phospholipase RJP_RS04955 PF00308 Bacterial dnaA protein RJP_RS04955 PF08299 Bacterial dnaA protein helix-turn-helix RJP_RS04955 PF11638 DnaA N-terminal domain RJP_RS04960 PF00581 Rhodanese-like domain RJP_RS04965 PF03937 Flavinator of succinate dehydrogenase RJP_RS04970 PF00270 DEAD/DEAH box helicase RJP_RS04970 PF00271 Helicase conserved C-terminal domain RJP_RS04970 PF02559 CarD-like/TRCF domain RJP_RS04970 PF03461 TRCF domain RJP_RS04975 PF01225 Mur ligase family, catalytic domain RJP_RS04975 PF02875 Mur ligase family, glutamate ligase domain RJP_RS04975 PF08245 Mur ligase middle domain RJP_RS04980 PF01225 Mur ligase family, catalytic domain RJP_RS04980 PF02875 Mur ligase family, glutamate ligase domain RJP_RS04980 PF08245 Mur ligase middle domain RJP_RS04985 PF00953 Glycosyl transferase family 4 RJP_RS05000 PF03358 NADPH-dependent FMN reductase RJP_RS05005 PF01144 Coenzyme A transferase RJP_RS05010 PF01144 Coenzyme A transferase RJP_RS05030 PF00270 DEAD/DEAH box helicase RJP_RS05030 PF00271 Helicase conserved C-terminal domain RJP_RS05030 PF17191 RJP_RS05030 RJP_RS05040 PF05857 RJP_RS05040 RJP_RS05045 PF03023 RJP_RS05045 RJP_RS05050 PF00719 Inorganic pyrophosphatase RJP_RS05055 PF03100 CcmE RJP_RS05060 PF02630 SCO1/SenC RJP_RS05065 PF02355 Protein export membrane protein RJP_RS05065 PF07549 SecD/SecF GG Motif RJP_RS05070 PF02699 Preprotein translocase subunit RJP_RS05100 PF01649 Ribosomal protein S20 RJP_RS05105 PF01196 Ribosomal protein L17 RJP_RS05110 PF01000 RNA polymerase Rpb3/RpoA insert domain RJP_RS05110 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain RJP_RS05110 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain RJP_RS05115 PF00411 Ribosomal protein S11 RJP_RS05120 PF00416 Ribosomal protein S13/S18 RJP_RS05125 PF00406 Adenylate kinase RJP_RS05125 PF05191 Adenylate kinase, active site lid RJP_RS05130 PF00344 SecY translocase RJP_RS05135 PF00828 Ribosomal protein L18e/L15 RJP_RS05140 PF00327 Ribosomal protein L30p/L7e RJP_RS05145 PF00333 Ribosomal protein S5, N-terminal domain RJP_RS05145 PF03719 Ribosomal protein S5, C-terminal domain RJP_RS05150 PF00861 Ribosomal L18p/L5e family RJP_RS05155 PF00347 Ribosomal protein L6 RJP_RS05160 PF00410 Ribosomal protein S8 RJP_RS05165 PF00253 Ribosomal protein S14p/S29e RJP_RS05170 PF00281 Ribosomal protein L5 RJP_RS05170 PF00673 ribosomal L5P family C-terminus RJP_RS05175 PF00467 KOW motif RJP_RS05175 PF17136 RJP_RS05175 RJP_RS05180 PF00238 Ribosomal protein L14p/L23e RJP_RS05185 PF00366 Ribosomal protein S17 RJP_RS05190 PF00831 Ribosomal L29 protein RJP_RS05195 PF00252 Ribosomal protein L16p/L10e RJP_RS05200 PF00189 Ribosomal protein S3, C-terminal domain RJP_RS05200 PF07650 KH domain RJP_RS05205 PF00237 Ribosomal protein L22p/L17e RJP_RS05210 PF00203 Ribosomal protein S19 RJP_RS05215 PF00181 Ribosomal Proteins L2, RNA binding domain RJP_RS05215 PF03947 Ribosomal Proteins L2, C-terminal domain RJP_RS05220 PF00276 Ribosomal protein L23 RJP_RS05225 PF00573 Ribosomal protein L4/L1 family RJP_RS05230 PF00297 Ribosomal protein L3 RJP_RS05235 PF00338 Ribosomal protein S10p/S20e RJP_RS05240 PF00009 Elongation factor Tu GTP binding domain RJP_RS05240 PF03143 Elongation factor Tu C-terminal domain RJP_RS05240 PF03144 Elongation factor Tu domain 2 RJP_RS05255 PF00588 SpoU rRNA Methylase family RJP_RS05255 PF08032 RNA 2'-O ribose methyltransferase substrate binding RJP_RS05265 PF00206 Lyase RJP_RS05265 PF10415 Fumarase C C-terminus RJP_RS05270 PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system RJP_RS05275 PF00091 Tubulin/FtsZ family, GTPase domain RJP_RS05275 PF12327 FtsZ family, C-terminal domain RJP_RS05295 PF01106 NifU-like domain RJP_RS05295 PF08712 Scaffold protein Nfu/NifU N terminal RJP_RS05300 PF07690 Major Facilitator Superfamily RJP_RS05305 PF00270 DEAD/DEAH box helicase RJP_RS05305 PF00271 Helicase conserved C-terminal domain RJP_RS05310 PF00313 'Cold-shock' DNA-binding domain RJP_RS05320 PF00398 Ribosomal RNA adenine dimethylase RJP_RS05325 PF13624 SurA N-terminal domain RJP_RS05330 PF04453 Organic solvent tolerance protein RJP_RS05335 PF02601 RJP_RS05335 RJP_RS05335 PF13742 RJP_RS05335 RJP_RS05345 PF03372 Endonuclease/Exonuclease/phosphatase family RJP_RS05350 PF03083 Sugar efflux transporter for intercellular exchange RJP_RS05355 PF01926 50S ribosome-binding GTPase RJP_RS05355 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal RJP_RS05390 PF03109 RJP_RS05390 RJP_RS05395 PF01209 ubiE/COQ5 methyltransferase family RJP_RS05400 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain RJP_RS05400 PF06827 Zinc finger found in FPG and IleRS RJP_RS05400 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain RJP_RS05405 PF00483 Nucleotidyl transferase RJP_RS05440 PF01026 TatD related DNase RJP_RS05445 PF08264 Anticodon-binding domain of tRNA RJP_RS05445 PF09334 tRNA synthetases class I (M) RJP_RS05450 PF02223 Thymidylate kinase RJP_RS05460 PF01040 UbiA prenyltransferase family RJP_RS05465 PF04754 RJP_RS05465 RJP_RS05470 PF00133 tRNA synthetases class I (I, L, M and V) RJP_RS05470 PF08264 Anticodon-binding domain of tRNA RJP_RS05475 PF04991 RJP_RS05475 RJP_RS05480 PF13173 AAA domain RJP_RS05480 PF13635 RJP_RS05480 RJP_RS05485 PF02646 RJP_RS05485 RJP_RS05530 PF13781 RJP_RS05530 RJP_RS05540 PF06689 ClpX C4-type zinc finger RJP_RS05540 PF07724 AAA domain (Cdc48 subfamily) RJP_RS05540 PF10431 C-terminal, D2-small domain, of ClpB protein RJP_RS05545 PF13302 Acetyltransferase (GNAT) domain RJP_RS05550 PF06508 Queuosine biosynthesis protein QueC RJP_RS05555 PF05534 RJP_RS05555 RJP_RS05565 PF00005 ABC transporter RJP_RS05565 PF00664 ABC transporter transmembrane region RJP_RS05570 PF10880 RJP_RS05570 RJP_RS05575 PF07690 Major Facilitator Superfamily RJP_RS05580 PF02687 RJP_RS05580 RJP_RS05580 PF12704 MacB-like periplasmic core domain RJP_RS05585 PF00005 ABC transporter RJP_RS05590 PF02902 Ulp1 protease family, C-terminal catalytic domain RJP_RS05595 PF00571 CBS domain RJP_RS05595 PF01595 RJP_RS05595 RJP_RS05595 PF03471 Transporter associated domain RJP_RS05600 PF01578 RJP_RS05600 RJP_RS05600 PF16327 RJP_RS05600 RJP_RS05625 PF03797 Autotransporter beta-domain RJP_RS05625 PF12334 RJP_RS05625 RJP_RS05630 PF04607 Region found in RelA / SpoT proteins RJP_RS05635 PF00933 Glycosyl hydrolase family 3 N terminal domain RJP_RS05640 PF13411 MerR HTH family regulatory protein RJP_RS05645 PF00216 Bacterial DNA-binding protein RJP_RS05655 PF00578 AhpC/TSA family RJP_RS05660 PF03279 RJP_RS05660 RJP_RS05665 PF02606 Tetraacyldisaccharide-1-P 4'-kinase RJP_RS05670 PF01551 Peptidase family M23 RJP_RS05680 PF00533 BRCA1 C Terminus (BRCT) domain RJP_RS05680 PF01653 NAD-dependent DNA ligase adenylation domain RJP_RS05680 PF03120 NAD-dependent DNA ligase OB-fold domain RJP_RS05680 PF12826 Helix-hairpin-helix motif RJP_RS05685 PF01702 Queuine tRNA-ribosyltransferase RJP_RS05715 PF02470 RJP_RS05715 RJP_RS05720 PF05071 RJP_RS05720 RJP_RS05725 PF00075 RNase H RJP_RS05730 PF04386 Stringent starvation protein B RJP_RS05735 PF06230 Protein of unknown function (DUF1009) RJP_RS05740 PF01121 Dephospho-CoA kinase RJP_RS05745 PF00929 Exonuclease RJP_RS05750 PF02104 RJP_RS05750 RJP_RS05755 PF00580 UvrD/REP helicase N-terminal domain RJP_RS05755 PF13361 UvrD-like helicase C-terminal domain RJP_RS05770 PF00698 Acyl transferase domain RJP_RS05825 PF00108 Thiolase, N-terminal domain RJP_RS05825 PF02803 Thiolase, C-terminal domain RJP_RS05835 PF03219 RJP_RS05835 RJP_RS05845 PF00293 NUDIX domain RJP_RS05855 PF00571 CBS domain RJP_RS05855 PF03471 Transporter associated domain RJP_RS05860 PF02130 Uncharacterized protein family UPF0054 RJP_RS05865 PF02452 PemK-like protein RJP_RS05870 PF04055 Radical SAM superfamily RJP_RS05870 PF16881 RJP_RS05870 RJP_RS05875 PF00464 Serine hydroxymethyltransferase RJP_RS05880 PF02230 Phospholipase/Carboxylesterase RJP_RS05885 PF00462 Glutaredoxin RJP_RS05890 PF00633 Helix-hairpin-helix motif RJP_RS05890 PF00730 HhH-GPD superfamily base excision DNA repair protein RJP_RS05890 PF10576 Iron-sulfur binding domain of endonuclease III RJP_RS05910 PF08085 RJP_RS05910 RJP_RS05915 PF12784 RJP_RS05915 RJP_RS05925 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases RJP_RS05930 PF13458 Periplasmic binding protein RJP_RS05935 PF02416 mttA/Hcf106 family RJP_RS05940 PF04608 Phosphatidylglycerophosphatase A RJP_RS05945 PF00829 Ribosomal prokaryotic L21 protein RJP_RS05950 PF01016 Ribosomal L27 protein RJP_RS05955 PF00696 Amino acid kinase family RJP_RS05970 PF12706 Beta-lactamase superfamily domain RJP_RS05985 PF07690 Major Facilitator Superfamily RJP_RS05990 PF05164 Cell division protein ZapA RJP_RS06000 PF13413 Helix-turn-helix domain RJP_RS06005 PF05088 RJP_RS06005 RJP_RS06010 PF01926 50S ribosome-binding GTPase RJP_RS06010 PF10396 GTP-binding protein TrmE N-terminus RJP_RS06010 PF12631 Catalytic cysteine-containing C-terminus of GTPase, MnmE RJP_RS06040 PF07690 Major Facilitator Superfamily RJP_RS06045 PF00154 recA bacterial DNA recombination protein RJP_RS06050 PF13561 Enoyl-(Acyl carrier protein) reductase RJP_RS06055 PF00550 Phosphopantetheine attachment site RJP_RS06060 PF00109 Beta-ketoacyl synthase, N-terminal domain RJP_RS06060 PF02801 Beta-ketoacyl synthase, C-terminal domain RJP_RS06065 PF00005 ABC transporter RJP_RS06065 PF16326 RJP_RS06065 RJP_RS06080 PF13173 AAA domain RJP_RS06080 PF13635 RJP_RS06080 RJP_RS06085 PF00625 Guanylate kinase RJP_RS06090 PF01381 Helix-turn-helix RJP_RS06095 PF04085 rod shape-determining protein MreC RJP_RS06100 PF06723 MreB/Mbl protein RJP_RS06105 PF03739 RJP_RS06105 RJP_RS06115 PF00691 OmpA family RJP_RS06125 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal RJP_RS06125 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III RJP_RS06130 PF01783 Ribosomal L32p protein family RJP_RS06135 PF04355 SmpA / OmlA family RJP_RS06140 PF00448 SRP54-type protein, GTPase domain RJP_RS06140 PF02881 SRP54-type protein, helical bundle domain RJP_RS06145 PF00476 DNA polymerase family A RJP_RS06145 PF01367 5'-3' exonuclease, C-terminal SAM fold RJP_RS06145 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain RJP_RS06150 PF00438 S-adenosylmethionine synthetase, N-terminal domain RJP_RS06155 PF00438 S-adenosylmethionine synthetase, N-terminal domain RJP_RS06155 PF02772 S-adenosylmethionine synthetase, central domain RJP_RS06155 PF02773 S-adenosylmethionine synthetase, C-terminal domain RJP_RS06180 PF02811 PHP domain RJP_RS06180 PF07733 Bacterial DNA polymerase III alpha subunit RJP_RS06180 PF14579 Helix-hairpin-helix motif RJP_RS06185 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain RJP_RS06185 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain RJP_RS06185 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain RJP_RS06190 PF13116 RJP_RS06190 RJP_RS06190 PF13502 RJP_RS06190 RJP_RS06195 PF07690 Major Facilitator Superfamily RJP_RS06200 PF00902 Sec-independent protein translocase protein (TatC) RJP_RS06205 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) RJP_RS06205 PF02403 Seryl-tRNA synthetase N-terminal domain RJP_RS06210 PF03135 RJP_RS06210 RJP_RS06220 PF03741 RJP_RS06220 RJP_RS06230 PF10119 RJP_RS06230 RJP_RS06230 PF13847 Methyltransferase domain RJP_RS06240 PF01381 Helix-turn-helix RJP_RS06245 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 RJP_RS06250 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L RJP_RS06255 PF00361 NADH-Ubiquinone/plastoquinone (complex I), various chains RJP_RS06255 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus RJP_RS06260 PF00361 NADH-Ubiquinone/plastoquinone (complex I), various chains RJP_RS06265 PF00005 ABC transporter RJP_RS06270 PF12838 4Fe-4S dicluster domain RJP_RS06275 PF00146 NADH dehydrogenase RJP_RS06280 PF00384 Molybdopterin oxidoreductase RJP_RS06280 PF09326 RJP_RS06280 RJP_RS06280 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region RJP_RS06280 PF13510 2Fe-2S iron-sulfur cluster binding domain RJP_RS06290 PF00330 Aconitase family (aconitate hydratase) RJP_RS06290 PF00694 Aconitase C-terminal domain RJP_RS06295 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain RJP_RS06300 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain RJP_RS06300 PF02874 ATP synthase alpha/beta family, beta-barrel domain RJP_RS06305 PF00231 ATP synthase RJP_RS06310 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain RJP_RS06310 PF00306 ATP synthase alpha/beta chain, C terminal domain RJP_RS06310 PF02874 ATP synthase alpha/beta family, beta-barrel domain RJP_RS06315 PF00213 ATP synthase delta (OSCP) subunit RJP_RS06320 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain RJP_RS06320 PF07992 Pyridine nucleotide-disulphide oxidoreductase RJP_RS06335 PF00905 Penicillin binding protein transpeptidase domain RJP_RS06340 PF00905 Penicillin binding protein transpeptidase domain RJP_RS06345 PF00905 Penicillin binding protein transpeptidase domain RJP_RS06345 PF00912 Transglycosylase RJP_RS06345 PF17092 RJP_RS06345 RJP_RS06350 PF00919 Uncharacterized protein family UPF0004 RJP_RS06350 PF01938 TRAM domain RJP_RS06350 PF04055 Radical SAM superfamily RJP_RS06365 PF12784 RJP_RS06365 RJP_RS06370 PF06347 Bacterial SH3 domain RJP_RS06375 PF00999 Sodium/hydrogen exchanger family RJP_RS06375 PF02254 TrkA-N domain RJP_RS06380 PF02410 Oligomerisation domain RJP_RS06385 PF01722 BolA-like protein RJP_RS06440 PF01176 Translation initiation factor 1A / IF-1 RJP_RS06445 PF02545 Maf-like protein RJP_RS06450 PF01258 Prokaryotic dksA/traR C4-type zinc finger RJP_RS06455 PF00589 Phage integrase family RJP_RS06455 PF02899 Phage integrase, N-terminal SAM-like domain RJP_RS06460 PF09361 RJP_RS06460 RJP_RS06465 PF13091 PLD-like domain RJP_RS06480 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase RJP_RS06485 PF13145 PPIC-type PPIASE domain RJP_RS06485 PF13624 SurA N-terminal domain RJP_RS06490 PF03797 Autotransporter beta-domain RJP_RS06495 PF01580 FtsK/SpoIIIE family RJP_RS06495 PF09397 Ftsk gamma domain RJP_RS06495 PF13491 RJP_RS06495 RJP_RS06505 PF00557 Metallopeptidase family M24 RJP_RS06520 PF00953 Glycosyl transferase family 4 RJP_RS06525 PF05258 RJP_RS06525 RJP_RS06530 PF13505 Outer membrane protein beta-barrel domain RJP_RS06535 PF13505 Outer membrane protein beta-barrel domain RJP_RS06540 PF11953 Domain of unknown function (DUF3470) RJP_RS06540 PF12838 4Fe-4S dicluster domain RJP_RS06545 PF01578 RJP_RS06545 RJP_RS06550 PF14437 RJP_RS06550 RJP_RS06555 PF01545 Cation efflux family RJP_RS06555 PF16916 RJP_RS06555 RJP_RS06560 PF05433 RJP_RS06560 RJP_RS06560 PF16998 RJP_RS06560 RJP_RS06570 PF00005 ABC transporter RJP_RS06595 PF00005 ABC transporter RJP_RS06600 PF00436 Single-strand binding protein family RJP_RS06615 PF00959 Phage lysozyme RJP_RS06630 PF02594 Uncharacterised ACR, YggU family COG1872 RJP_RS06635 PF00183 Hsp90 protein RJP_RS06635 PF13589 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RJP_RS06640 PF00155 Aminotransferase class I and II RJP_RS06650 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase RJP_RS06650 PF05697 Bacterial trigger factor protein (TF) RJP_RS06650 PF05698 Bacterial trigger factor protein (TF) C-terminus RJP_RS06655 PF01018 GTP1/OBG RJP_RS06655 PF01926 50S ribosome-binding GTPase RJP_RS06660 PF00285 Citrate synthase RJP_RS06670 PF03167 Uracil DNA glycosylase superfamily RJP_RS06675 PF00849 RNA pseudouridylate synthase RJP_RS06675 PF01479 S4 domain RJP_RS06695 PF02390 Putative methyltransferase RJP_RS06695 PF05175 Methyltransferase small domain RJP_RS06700 PF01300 Telomere recombination RJP_RS06700 PF03481 Putative GTP-binding controlling metal-binding RJP_RS06705 PF02092 RJP_RS06705 RJP_RS06705 PF05746 DALR anticodon binding domain RJP_RS06710 PF02091 Glycyl-tRNA synthetase alpha subunit RJP_RS06715 PF01850 PIN domain RJP_RS06720 PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system RJP_RS06725 PF02677 RJP_RS06725 RJP_RS06730 PF00083 Sugar (and other) transporter RJP_RS06750 PF01411 tRNA synthetases class II (A) RJP_RS06750 PF02272 DHHA1 domain RJP_RS06750 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain RJP_RS06755 PF01416 tRNA pseudouridine synthase RJP_RS06760 PF00140 Sigma-70 factor, region 1 RJP_RS06760 PF03979 Sigma-70 factor, region 1 RJP_RS06760 PF04539 Sigma-70 region 3 RJP_RS06760 PF04542 Sigma-70 region 2 RJP_RS06760 PF04545 Sigma-70, region 4 RJP_RS06760 PF04546 Sigma-70, non-essential region RJP_RS06765 PF01807 CHC2 zinc finger RJP_RS06765 PF08275 DNA primase catalytic core, N-terminal domain RJP_RS06765 PF13662 Toprim domain RJP_RS06775 PF01272 Transcription elongation factor, GreA/GreB, C-term RJP_RS06775 PF03449 Transcription elongation factor, N-terminal RJP_RS06780 PF12769 Domain of unknown function (DUF3814) RJP_RS06785 PF01262 Alanine dehydrogenase/PNT, C-terminal domain RJP_RS06785 PF05222 Alanine dehydrogenase/PNT, N-terminal domain RJP_RS06790 PF03548 Outer membrane lipoprotein carrier protein LolA RJP_RS06795 PF12169 DNA polymerase III subunits gamma and tau domain III RJP_RS06795 PF13177 DNA polymerase III, delta subunit RJP_RS06800 PF02575 YbaB/EbfC DNA-binding family RJP_RS06810 PF00023 Ankyrin repeat RJP_RS06815 PF13975 RJP_RS06815 RJP_RS06835 PF00005 ABC transporter RJP_RS06840 PF12706 Beta-lactamase superfamily domain RJP_RS06845 PF01569 PAP2 superfamily RJP_RS06850 PF04221 RelB antitoxin RJP_RS06855 PF03739 RJP_RS06855 RJP_RS06860 PF04364 DNA polymerase III chi subunit, HolC RJP_RS06870 PF01546 Peptidase family M20/M25/M40 RJP_RS06870 PF07687 Peptidase dimerisation domain RJP_RS06875 PF01420 Type I restriction modification DNA specificity domain RJP_RS06905 PF03099 Biotin/lipoate A/B protein ligase family RJP_RS06910 PF01471 Putative peptidoglycan binding domain RJP_RS06910 PF01510 N-acetylmuramoyl-L-alanine amidase RJP_RS06920 PF00886 Ribosomal protein S16 RJP_RS06925 PF00471 Ribosomal protein L33 RJP_RS06930 PF01119 DNA mismatch repair protein, C-terminal domain RJP_RS06930 PF08676 MutL C terminal dimerisation domain RJP_RS06930 PF13589 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RJP_RS06935 PF00106 short chain dehydrogenase RJP_RS06945 PF00515 Tetratricopeptide repeat RJP_RS06950 PF00515 Tetratricopeptide repeat RJP_RS06950 PF13181 Tetratricopeptide repeat RJP_RS06955 PF07690 Major Facilitator Superfamily RJP_RS06960 PF01218 Coproporphyrinogen III oxidase RJP_RS06970 PF02498 RJP_RS06970 RJP_RS06980 PF03653 RJP_RS06980 RJP_RS06985 PF00762 Ferrochelatase RJP_RS06990 PF01208 Uroporphyrinogen decarboxylase (URO-D) RJP_RS07030 PF03797 Autotransporter beta-domain RJP_RS07090 PF06296 RJP_RS07090