RJP_RS00025 SM00382 ATPases associated with a variety of cellular activities RJP_RS00130 SM00869 Autotransporter beta-domain RJP_RS00200 SM01058 CarD-like/TRCF domain RJP_RS00345 SM00382 ATPases associated with a variety of cellular activities RJP_RS00345 SM01086 C-terminal, D2-small domain, of ClpB protein RJP_RS00365 SM00862 Transcriptional regulatory protein, C terminal RJP_RS00390 SM00382 ATPases associated with a variety of cellular activities RJP_RS00490 SM00562 RJP_RS00490 RJP_RS00495 SM01228 RJP_RS00495 RJP_RS00510 SM00470 ParB-like nuclease domain RJP_RS00515 SM00382 ATPases associated with a variety of cellular activities RJP_RS00550 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. RJP_RS00555 SM00836 DALR anticodon binding domain RJP_RS00555 SM01016 Arginyl tRNA synthetase N terminal dom RJP_RS00565 SM00434 DNA Topoisomerase IV RJP_RS00590 SM00448 cheY-homologous receiver domain RJP_RS00590 SM00862 Transcriptional regulatory protein, C terminal RJP_RS00640 SM00869 Autotransporter beta-domain RJP_RS00645 SM00840 RJP_RS00645 RJP_RS00720 SM01005 Alanine racemase, C-terminal domain RJP_RS00730 SM00382 ATPases associated with a variety of cellular activities RJP_RS00780 SM00382 ATPases associated with a variety of cellular activities RJP_RS00850 SM00928 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region RJP_RS00860 SM00358 Double-stranded RNA binding motif RJP_RS00860 SM00535 Ribonuclease III family RJP_RS00900 SM00244 prohibitin homologues RJP_RS00905 SM00244 prohibitin homologues RJP_RS00910 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. RJP_RS00915 SM00450 Rhodanese Homology Domain RJP_RS00950 SM00838 Elongation factor G C-terminus RJP_RS00950 SM00889 Elongation factor G, domain IV RJP_RS00965 SM00738 In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold. RJP_RS00965 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. RJP_RS00970 SM00649 Ribosomal protein L11/L12 RJP_RS00995 SM00663 RNA polymerase I subunit A N-terminus RJP_RS01040 SM00903 Flavin reductase like domain RJP_RS01045 SM00062 Bacterial periplasmic substrate-binding proteins RJP_RS01045 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. RJP_RS01050 SM00845 GatB domain RJP_RS01110 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. RJP_RS01160 SM00411 bacterial (prokaryotic) histone like domain RJP_RS01170 SM00382 ATPases associated with a variety of cellular activities RJP_RS01170 SM00962 SRP54-type protein, GTPase domain RJP_RS01170 SM00963 SRP54-type protein, helical bundle domain RJP_RS01200 SM00729 Elongator protein 3, MiaB family, Radical SAM RJP_RS01250 SM00861 Transketolase, pyrimidine binding domain RJP_RS01275 SM00271 DnaJ molecular chaperone homology domain RJP_RS01410 SM00271 DnaJ molecular chaperone homology domain RJP_RS01420 SM00487 DEAD-like helicases superfamily RJP_RS01420 SM00490 helicase superfamily c-terminal domain RJP_RS01430 SM00382 ATPases associated with a variety of cellular activities RJP_RS01435 SM00434 DNA Topoisomerase IV RJP_RS01525 SM00248 ankyrin repeats RJP_RS01540 SM00382 ATPases associated with a variety of cellular activities RJP_RS01590 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain RJP_RS01660 SM00387 Histidine kinase-like ATPases RJP_RS01660 SM00433 TopoisomeraseII RJP_RS01665 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. RJP_RS01665 SM00245 tail specific protease RJP_RS01670 SM00387 Histidine kinase-like ATPases RJP_RS01670 SM00388 His Kinase A (phosphoacceptor) domain RJP_RS01685 SM00564 beta-propeller repeat RJP_RS01730 SM00267 diguanylate cyclase RJP_RS01730 SM00448 cheY-homologous receiver domain RJP_RS01735 SM00841 Elongation factor P, C-terminal RJP_RS01735 SM01185 RJP_RS01735 RJP_RS01780 SM00052 Putative diguanylate phosphodiesterase RJP_RS01805 SM00842 Cell division protein FtsA RJP_RS01835 SM00316 Ribosomal protein S1-like RNA-binding domain RJP_RS01845 SM00363 S4 RNA-binding domain RJP_RS01865 SM00861 Transketolase, pyrimidine binding domain RJP_RS01885 SM00935 Outer membrane protein (OmpH-like) RJP_RS01890 SM01329 RJP_RS01890 RJP_RS01965 SM00937 RJP_RS01965 RJP_RS01970 SM00838 Elongation factor G C-terminus RJP_RS02170 SM00533 DNA-binding domain of DNA mismatch repair MUTS family RJP_RS02170 SM00534 ATPase domain of DNA mismatch repair MUTS family RJP_RS02310 SM00382 ATPases associated with a variety of cellular activities RJP_RS02315 SM00859 Semialdehyde dehydrogenase, NAD binding domain RJP_RS02335 SM00382 ATPases associated with a variety of cellular activities RJP_RS02335 SM01086 C-terminal, D2-small domain, of ClpB protein RJP_RS02385 SM01219 RJP_RS02385 RJP_RS02415 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain RJP_RS02415 SM00437 Bacterial DNA topoisomerase I DNA-binding domain RJP_RS02415 SM00493 RJP_RS02415 RJP_RS02430 SM00244 prohibitin homologues RJP_RS02445 SM00732 Likely ribonuclease with RNase H fold. RJP_RS02450 SM00530 Helix-turn-helix XRE-family like proteins RJP_RS02520 SM00363 S4 RNA-binding domain RJP_RS02520 SM01390 RJP_RS02520 RJP_RS02585 SM01234 RJP_RS02585 RJP_RS02595 SM00465 GIY-YIG type nucleases (URI domain) RJP_RS02685 SM00382 ATPases associated with a variety of cellular activities RJP_RS02695 SM00248 ankyrin repeats RJP_RS02720 SM00919 Malic enzyme, NAD binding domain RJP_RS02720 SM01274 RJP_RS02720 RJP_RS02735 SM00966 SpoVT / AbrB like domain RJP_RS02850 SM00382 ATPases associated with a variety of cellular activities RJP_RS02855 SM00382 ATPases associated with a variety of cellular activities RJP_RS03070 SM00729 Elongator protein 3, MiaB family, Radical SAM RJP_RS03080 SM00873 B3/4 domain RJP_RS03080 SM00874 tRNA synthetase B5 domain RJP_RS03080 SM00896 Ferredoxin-fold anticodon binding domain RJP_RS03085 SM00480 DNA polymerase III beta subunit RJP_RS03105 SM00474 3'-5' exonuclease RJP_RS03125 SM00387 Histidine kinase-like ATPases RJP_RS03125 SM00388 His Kinase A (phosphoacceptor) domain RJP_RS03130 SM00448 cheY-homologous receiver domain RJP_RS03130 SM00862 Transcriptional regulatory protein, C terminal RJP_RS03140 SM01130 RJP_RS03140 RJP_RS03155 SM00881 CoA binding domain RJP_RS03170 SM00966 SpoVT / AbrB like domain RJP_RS03190 SM00978 RJP_RS03190 RJP_RS03215 SM00493 RJP_RS03215 RJP_RS03235 SM00849 Metallo-beta-lactamase superfamily RJP_RS03310 SM00382 ATPases associated with a variety of cellular activities RJP_RS03310 SM00464 Found in ATP-dependent protease La (LON) RJP_RS03420 SM00972 Spore Coat Protein U domain RJP_RS03475 SM00382 ATPases associated with a variety of cellular activities RJP_RS03490 SM00116 Domain in cystathionine beta-synthase and other proteins. RJP_RS03495 SM00316 Ribosomal protein S1-like RNA-binding domain RJP_RS03495 SM00322 K homology RNA-binding domain RJP_RS03500 SM01387 RJP_RS03500 RJP_RS03520 SM00530 Helix-turn-helix XRE-family like proteins RJP_RS03530 SM01230 RJP_RS03530 RJP_RS03635 SM00937 RJP_RS03635 RJP_RS03650 SM00357 Cold shock protein domain RJP_RS03650 SM00382 ATPases associated with a variety of cellular activities RJP_RS03650 SM00959 Rho termination factor, N-terminal domain RJP_RS03660 SM00411 bacterial (prokaryotic) histone like domain RJP_RS03715 SM00530 Helix-turn-helix XRE-family like proteins RJP_RS03725 SM00316 Ribosomal protein S1-like RNA-binding domain RJP_RS03860 SM00474 3'-5' exonuclease RJP_RS03925 SM00563 Phosphate acyltransferases RJP_RS04050 SM00257 Lysin motif RJP_RS04140 SM01004 Delta-aminolevulinic acid dehydratase RJP_RS04155 SM00487 DEAD-like helicases superfamily RJP_RS04155 SM00490 helicase superfamily c-terminal domain RJP_RS04190 SM00363 S4 RNA-binding domain RJP_RS04205 SM00382 ATPases associated with a variety of cellular activities RJP_RS04235 SM00316 Ribosomal protein S1-like RNA-binding domain RJP_RS04235 SM00322 K homology RNA-binding domain RJP_RS04260 SM00363 S4 RNA-binding domain RJP_RS04320 SM01359 RJP_RS04320 RJP_RS04320 SM01360 RJP_RS04320 RJP_RS04440 SM00465 GIY-YIG type nucleases (URI domain) RJP_RS04520 SM00248 ankyrin repeats RJP_RS04565 SM00957 SecA DEAD-like domain RJP_RS04565 SM00958 SecA preprotein cross-linking domain RJP_RS04580 SM01409 RJP_RS04580 RJP_RS04590 SM00387 Histidine kinase-like ATPases RJP_RS04590 SM00433 TopoisomeraseII RJP_RS04605 SM00924 MgtE intracellular N domain RJP_RS04695 SM00883 Chaperonin 10 Kd subunit RJP_RS04740 SM00563 Phosphate acyltransferases RJP_RS04755 SM00878 Biotin carboxylase C-terminal domain RJP_RS04805 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain RJP_RS04805 SM00387 Histidine kinase-like ATPases RJP_RS04805 SM00388 His Kinase A (phosphoacceptor) domain RJP_RS04955 SM00382 ATPases associated with a variety of cellular activities RJP_RS04955 SM00760 Bacterial dnaA protein helix-turn-helix domain RJP_RS04960 SM00450 Rhodanese Homology Domain RJP_RS04970 SM00487 DEAD-like helicases superfamily RJP_RS04970 SM00490 helicase superfamily c-terminal domain RJP_RS04970 SM00982 RJP_RS04970 RJP_RS04970 SM01058 CarD-like/TRCF domain RJP_RS04990 SM00246 Wiskott Aldrich syndrome homology region 2 RJP_RS05005 SM00882 Coenzyme A transferase RJP_RS05010 SM00882 Coenzyme A transferase RJP_RS05030 SM00487 DEAD-like helicases superfamily RJP_RS05030 SM00490 helicase superfamily c-terminal domain RJP_RS05070 SM01323 RJP_RS05070 RJP_RS05110 SM00662 RNA polymerases D RJP_RS05175 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. RJP_RS05180 SM01374 RJP_RS05180 RJP_RS05200 SM00322 K homology RNA-binding domain RJP_RS05215 SM01382 RJP_RS05215 RJP_RS05215 SM01383 RJP_RS05215 RJP_RS05235 SM01403 RJP_RS05235 RJP_RS05255 SM00967 RNA 2'-O ribose methyltransferase substrate binding RJP_RS05275 SM00864 Tubulin/FtsZ family, GTPase domain RJP_RS05275 SM00865 Tubulin/FtsZ family, C-terminal domain RJP_RS05295 SM00932 Scaffold protein Nfu/NifU N terminal RJP_RS05305 SM00487 DEAD-like helicases superfamily RJP_RS05305 SM00490 helicase superfamily c-terminal domain RJP_RS05310 SM00357 Cold shock protein domain RJP_RS05320 SM00650 Ribosomal RNA adenine dimethylases RJP_RS05400 SM00898 Formamidopyrimidine-DNA glycosylase N-terminal domain RJP_RS05400 SM01232 RJP_RS05400 RJP_RS05540 SM00382 ATPases associated with a variety of cellular activities RJP_RS05540 SM00994 ClpX C4-type zinc finger RJP_RS05540 SM01086 C-terminal, D2-small domain, of ClpB protein RJP_RS05565 SM00382 ATPases associated with a variety of cellular activities RJP_RS05585 SM00382 ATPases associated with a variety of cellular activities RJP_RS05595 SM00116 Domain in cystathionine beta-synthase and other proteins. RJP_RS05595 SM01091 Transporter associated domain RJP_RS05625 SM00869 Autotransporter beta-domain RJP_RS05630 SM00954 Region found in RelA / SpoT proteins RJP_RS05645 SM00411 bacterial (prokaryotic) histone like domain RJP_RS05680 SM00292 breast cancer carboxy-terminal domain RJP_RS05680 SM00532 Ligase N family RJP_RS05745 SM00479 RJP_RS05745 RJP_RS05770 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. RJP_RS05855 SM01091 Transporter associated domain RJP_RS05870 SM00729 Elongator protein 3, MiaB family, Radical SAM RJP_RS05890 SM00478 endonuclease III RJP_RS05890 SM00525 RJP_RS05890 RJP_RS05960 SM00530 Helix-turn-helix XRE-family like proteins RJP_RS06045 SM00382 ATPases associated with a variety of cellular activities RJP_RS06050 SM00822 RJP_RS06050 RJP_RS06060 SM00825 Beta-ketoacyl synthase RJP_RS06065 SM00382 ATPases associated with a variety of cellular activities RJP_RS06085 SM00072 Guanylate kinase homologues. RJP_RS06090 SM00530 Helix-turn-helix XRE-family like proteins RJP_RS06140 SM00382 ATPases associated with a variety of cellular activities RJP_RS06140 SM00962 SRP54-type protein, GTPase domain RJP_RS06140 SM00963 SRP54-type protein, helical bundle domain RJP_RS06145 SM00279 Helix-hairpin-helix class 2 (Pol1 family) motifs RJP_RS06145 SM00475 5'-3' exonuclease RJP_RS06145 SM00482 DNA polymerase A domain RJP_RS06180 SM00481 DNA polymerase alpha chain like domain RJP_RS06185 SM00984 UDP binding domain RJP_RS06240 SM00530 Helix-turn-helix XRE-family like proteins RJP_RS06265 SM00382 ATPases associated with a variety of cellular activities RJP_RS06280 SM00929 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region RJP_RS06300 SM00382 ATPases associated with a variety of cellular activities RJP_RS06350 SM00729 Elongator protein 3, MiaB family, Radical SAM RJP_RS06370 SM00287 Bacterial SH3 domain homologues RJP_RS06465 SM00155 Phospholipase D. Active site motifs. RJP_RS06490 SM00869 Autotransporter beta-domain RJP_RS06495 SM00382 ATPases associated with a variety of cellular activities RJP_RS06495 SM00843 RJP_RS06495 RJP_RS06570 SM00382 ATPases associated with a variety of cellular activities RJP_RS06630 SM01152 RJP_RS06630 RJP_RS06635 SM00387 Histidine kinase-like ATPases RJP_RS06670 SM00986 Uracil DNA glycosylase superfamily RJP_RS06670 SM00987 UreE urease accessory protein, C-terminal domain RJP_RS06675 SM00363 S4 RNA-binding domain RJP_RS06750 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain RJP_RS06765 SM00400 zinc finger RJP_RS06765 SM00493 RJP_RS06765 RJP_RS06785 SM01002 Alanine dehydrogenase/PNT, C-terminal domain RJP_RS06785 SM01003 Alanine dehydrogenase/PNT, N-terminal domain RJP_RS06795 SM00382 ATPases associated with a variety of cellular activities RJP_RS06835 SM00382 ATPases associated with a variety of cellular activities RJP_RS06840 SM00849 Metallo-beta-lactamase superfamily RJP_RS06845 SM00014 Acid phosphatase homologues RJP_RS06910 SM00644 RJP_RS06910 RJP_RS06930 SM00853 MutL C terminal dimerisation domain RJP_RS06930 SM01340 RJP_RS06930 RJP_RS06945 SM00028 Tetratricopeptide repeats RJP_RS06950 SM00028 Tetratricopeptide repeats