RJP_RS04670 320f92509771458368b22e3c20194b13 178 SUPERFAMILY SSF51064 124 177 6.02E-15 T 25-04-2016 IPR009012 GrpE nucleotide exchange factor, head GO:0006457 RJP_RS04670 320f92509771458368b22e3c20194b13 178 PANTHER PTHR21237 3 178 1.5E-59 T 25-04-2016 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 RJP_RS04670 320f92509771458368b22e3c20194b13 178 ProSitePatterns PS01071 grpE protein signature. 131 174 - T 25-04-2016 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 RJP_RS04670 320f92509771458368b22e3c20194b13 178 Pfam PF01025 GrpE 17 176 1.5E-51 T 25-04-2016 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 RJP_RS04670 320f92509771458368b22e3c20194b13 178 PRINTS PR00773 GrpE protein signature 128 143 8.4E-23 T 25-04-2016 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 RJP_RS04670 320f92509771458368b22e3c20194b13 178 PRINTS PR00773 GrpE protein signature 43 59 8.4E-23 T 25-04-2016 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 RJP_RS04670 320f92509771458368b22e3c20194b13 178 PRINTS PR00773 GrpE protein signature 155 174 8.4E-23 T 25-04-2016 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 RJP_RS04670 320f92509771458368b22e3c20194b13 178 PRINTS PR00773 GrpE protein signature 71 86 8.4E-23 T 25-04-2016 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 RJP_RS04670 320f92509771458368b22e3c20194b13 178 Gene3D G3DSA:3.90.20.20 18 118 2.3E-29 T 25-04-2016 IPR013805 GrpE nucleotide exchange factor, coiled-coil RJP_RS04670 320f92509771458368b22e3c20194b13 178 SUPERFAMILY SSF58014 21 118 3.53E-24 T 25-04-2016 RJP_RS04670 320f92509771458368b22e3c20194b13 178 Hamap MF_01151 Protein GrpE [grpE]. 3 176 18.904 T 25-04-2016 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 RJP_RS04670 320f92509771458368b22e3c20194b13 178 Gene3D G3DSA:2.30.22.10 120 178 4.2E-20 T 25-04-2016 IPR009012 GrpE nucleotide exchange factor, head GO:0006457 RJP_RS06340 550242a8d5cff1e83b05ffa9fbdbd933 90 Gene3D G3DSA:3.40.710.10 4 89 1.3E-26 T 25-04-2016 IPR012338 Beta-lactamase/transpeptidase-like RJP_RS06340 550242a8d5cff1e83b05ffa9fbdbd933 90 ProSitePatterns PS00337 Beta-lactamase class-D active site. 16 26 - T 25-04-2016 IPR002137 Beta-lactamase, class-D active site GO:0008800|GO:0017001 KEGG: 00311+3.5.2.6 RJP_RS06340 550242a8d5cff1e83b05ffa9fbdbd933 90 SUPERFAMILY SSF56601 8 89 1.06E-10 T 25-04-2016 IPR012338 Beta-lactamase/transpeptidase-like RJP_RS06340 550242a8d5cff1e83b05ffa9fbdbd933 90 Pfam PF00905 Penicillin binding protein transpeptidase domain 8 89 6.5E-18 T 25-04-2016 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 RJP_RS00720 e1d76a7fbe76a58926586f838d9b8854 355 SMART SM01005 228 354 5.2E-53 T 25-04-2016 IPR011079 Alanine racemase, C-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 RJP_RS00720 e1d76a7fbe76a58926586f838d9b8854 355 Gene3D G3DSA:2.40.37.10 213 354 5.8E-53 T 25-04-2016 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 Reactome: REACT_13 RJP_RS00720 e1d76a7fbe76a58926586f838d9b8854 355 Hamap MF_01201 Alanine racemase. 1 354 29.39 T 25-04-2016 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 RJP_RS00720 e1d76a7fbe76a58926586f838d9b8854 355 PANTHER PTHR30511:SF0 1 354 1.6E-99 T 25-04-2016 RJP_RS00720 e1d76a7fbe76a58926586f838d9b8854 355 Gene3D G3DSA:3.20.20.10 10 212 1.0E-66 T 25-04-2016 IPR029066 PLP-binding barrel RJP_RS00720 e1d76a7fbe76a58926586f838d9b8854 355 SUPERFAMILY SSF51419 8 226 4.74E-54 T 25-04-2016 IPR029066 PLP-binding barrel RJP_RS00720 e1d76a7fbe76a58926586f838d9b8854 355 Pfam PF00842 Alanine racemase, C-terminal domain 229 353 2.3E-34 T 25-04-2016 IPR011079 Alanine racemase, C-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 RJP_RS00720 e1d76a7fbe76a58926586f838d9b8854 355 PRINTS PR00992 Alanine racemase signature 261 276 1.2E-29 T 25-04-2016 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 RJP_RS00720 e1d76a7fbe76a58926586f838d9b8854 355 PRINTS PR00992 Alanine racemase signature 336 349 1.2E-29 T 25-04-2016 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 RJP_RS00720 e1d76a7fbe76a58926586f838d9b8854 355 PRINTS PR00992 Alanine racemase signature 124 136 1.2E-29 T 25-04-2016 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 RJP_RS00720 e1d76a7fbe76a58926586f838d9b8854 355 PRINTS PR00992 Alanine racemase signature 26 42 1.2E-29 T 25-04-2016 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 RJP_RS00720 e1d76a7fbe76a58926586f838d9b8854 355 PRINTS PR00992 Alanine racemase signature 158 169 1.2E-29 T 25-04-2016 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 RJP_RS00720 e1d76a7fbe76a58926586f838d9b8854 355 PRINTS PR00992 Alanine racemase signature 244 259 1.2E-29 T 25-04-2016 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 RJP_RS00720 e1d76a7fbe76a58926586f838d9b8854 355 PRINTS PR00992 Alanine racemase signature 282 299 1.2E-29 T 25-04-2016 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 RJP_RS00720 e1d76a7fbe76a58926586f838d9b8854 355 Pfam PF01168 Alanine racemase, N-terminal domain 8 223 1.0E-48 T 25-04-2016 IPR001608 Alanine racemase, N-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 RJP_RS00720 e1d76a7fbe76a58926586f838d9b8854 355 ProSitePatterns PS00395 Alanine racemase pyridoxal-phosphate attachment site. 31 41 - T 25-04-2016 IPR020622 Alanine racemase, pyridoxal-phosphate attachment site KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 RJP_RS00720 e1d76a7fbe76a58926586f838d9b8854 355 PANTHER PTHR30511 1 354 1.6E-99 T 25-04-2016 RJP_RS00720 e1d76a7fbe76a58926586f838d9b8854 355 SUPERFAMILY SSF50621 226 354 3.0E-40 T 25-04-2016 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 Reactome: REACT_13 RJP_RS00720 e1d76a7fbe76a58926586f838d9b8854 355 TIGRFAM TIGR00492 alr: alanine racemase 5 354 9.0E-78 T 25-04-2016 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 RJP_RS04605 5cd5eef3c82d064264c06ac2bb4bbe78 456 SUPERFAMILY SSF54631 146 280 1.12E-20 T 25-04-2016 RJP_RS04605 5cd5eef3c82d064264c06ac2bb4bbe78 456 Pfam PF01769 Divalent cation transporter 327 448 2.0E-23 T 25-04-2016 IPR006667 SLC41 divalent cation transporters, integral membrane domain GO:0006812|GO:0008324 RJP_RS04605 5cd5eef3c82d064264c06ac2bb4bbe78 456 TIGRFAM TIGR00400 mgtE: magnesium transporter 20 455 2.3E-85 T 25-04-2016 IPR006669 Magnesium transporter MgtE GO:0015095|GO:0015693|GO:0016020 RJP_RS04605 5cd5eef3c82d064264c06ac2bb4bbe78 456 Pfam PF03448 MgtE intracellular N domain 44 145 6.2E-13 T 25-04-2016 IPR006668 Magnesium transporter, MgtE intracellular domain RJP_RS04605 5cd5eef3c82d064264c06ac2bb4bbe78 456 PANTHER PTHR41394 18 455 1.2E-33 T 25-04-2016 RJP_RS04605 5cd5eef3c82d064264c06ac2bb4bbe78 456 Gene3D G3DSA:3.10.580.10 142 267 1.1E-15 T 25-04-2016 RJP_RS04605 5cd5eef3c82d064264c06ac2bb4bbe78 456 Pfam PF00571 CBS domain 147 201 1.0E-4 T 25-04-2016 IPR000644 CBS domain RJP_RS04605 5cd5eef3c82d064264c06ac2bb4bbe78 456 Pfam PF00571 CBS domain 208 261 6.9E-6 T 25-04-2016 IPR000644 CBS domain RJP_RS04605 5cd5eef3c82d064264c06ac2bb4bbe78 456 SUPERFAMILY SSF158791 20 144 1.96E-17 T 25-04-2016 RJP_RS04605 5cd5eef3c82d064264c06ac2bb4bbe78 456 Gene3D G3DSA:1.10.357.20 285 455 5.2E-51 T 25-04-2016 IPR006667 SLC41 divalent cation transporters, integral membrane domain GO:0006812|GO:0008324 RJP_RS04605 5cd5eef3c82d064264c06ac2bb4bbe78 456 SUPERFAMILY SSF161093 284 455 5.49E-46 T 25-04-2016 RJP_RS04605 5cd5eef3c82d064264c06ac2bb4bbe78 456 Gene3D G3DSA:1.25.60.10 20 137 2.0E-16 T 25-04-2016 RJP_RS04605 5cd5eef3c82d064264c06ac2bb4bbe78 456 SMART SM00924 44 147 4.7E-17 T 25-04-2016 IPR006668 Magnesium transporter, MgtE intracellular domain RJP_RS05450 7bd5aa968a5a1015c13c48dabfc547c0 203 Pfam PF02223 Thymidylate kinase 12 199 1.1E-54 T 25-04-2016 RJP_RS05450 7bd5aa968a5a1015c13c48dabfc547c0 203 Gene3D G3DSA:3.40.50.300 6 202 5.1E-55 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RJP_RS05450 7bd5aa968a5a1015c13c48dabfc547c0 203 ProSitePatterns PS01331 Thymidylate kinase signature. 94 106 - T 25-04-2016 IPR018095 Thymidylate kinase, conserved site GO:0004798|GO:0005524|GO:0006233 KEGG: 00240+2.7.4.9|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7210 RJP_RS05450 7bd5aa968a5a1015c13c48dabfc547c0 203 SUPERFAMILY SSF52540 5 202 4.3E-51 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RJP_RS05450 7bd5aa968a5a1015c13c48dabfc547c0 203 PANTHER PTHR10344 5 203 4.2E-42 T 25-04-2016 RJP_RS05450 7bd5aa968a5a1015c13c48dabfc547c0 203 Hamap MF_00165 Thymidylate kinase [tmk]. 8 203 24.278 T 25-04-2016 IPR018094 Thymidylate kinase GO:0004798|GO:0005524|GO:0006233 KEGG: 00240+2.7.4.9|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7210 RJP_RS05450 7bd5aa968a5a1015c13c48dabfc547c0 203 TIGRFAM TIGR00041 DTMP_kinase: dTMP kinase 5 189 7.2E-44 T 25-04-2016 IPR018094 Thymidylate kinase GO:0004798|GO:0005524|GO:0006233 KEGG: 00240+2.7.4.9|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7210 RJP_RS05875 aec637d26992ac1d22bb2bbc1c9c72ed 420 Hamap MF_00051 Serine hydroxymethyltransferase [glyA]. 7 420 52.43 T 25-04-2016 IPR001085 Serine hydroxymethyltransferase GO:0016740 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|UniPathway: UPA00193|UniPathway: UPA00288 RJP_RS05875 aec637d26992ac1d22bb2bbc1c9c72ed 420 Gene3D G3DSA:3.40.640.10 37 283 1.3E-104 T 25-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 RJP_RS05875 aec637d26992ac1d22bb2bbc1c9c72ed 420 SUPERFAMILY SSF53383 4 420 1.14E-178 T 25-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase RJP_RS05875 aec637d26992ac1d22bb2bbc1c9c72ed 420 Gene3D G3DSA:3.90.1150.10 284 420 8.8E-53 T 25-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 RJP_RS05875 aec637d26992ac1d22bb2bbc1c9c72ed 420 ProSitePatterns PS00096 Serine hydroxymethyltransferase pyridoxal-phosphate attachment site. 222 238 - T 25-04-2016 IPR019798 Serine hydroxymethyltransferase, pyridoxal phosphate binding site GO:0004372|GO:0006544|GO:0006563|GO:0030170 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|UniPathway: UPA00193|UniPathway: UPA00288 RJP_RS05875 aec637d26992ac1d22bb2bbc1c9c72ed 420 Pfam PF00464 Serine hydroxymethyltransferase 8 385 3.1E-172 T 25-04-2016 IPR001085 Serine hydroxymethyltransferase GO:0016740 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|UniPathway: UPA00193|UniPathway: UPA00288 RJP_RS05875 aec637d26992ac1d22bb2bbc1c9c72ed 420 PIRSF PIRSF000412 1 420 2.1E-166 T 25-04-2016 IPR001085 Serine hydroxymethyltransferase GO:0016740 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|UniPathway: UPA00193|UniPathway: UPA00288 RJP_RS05875 aec637d26992ac1d22bb2bbc1c9c72ed 420 PANTHER PTHR11680 3 420 5.8E-251 T 25-04-2016 IPR001085 Serine hydroxymethyltransferase GO:0016740 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|UniPathway: UPA00193|UniPathway: UPA00288 RJP_RS01115 acefbbce1c720e61785ed278c664b07c 156 Gene3D G3DSA:1.10.940.10 8 152 1.1E-31 T 25-04-2016 IPR006027 NusB/RsmB/TIM44 GO:0003723|GO:0006355 RJP_RS01115 acefbbce1c720e61785ed278c664b07c 156 SUPERFAMILY SSF48013 8 152 1.96E-29 T 25-04-2016 IPR006027 NusB/RsmB/TIM44 GO:0003723|GO:0006355 RJP_RS01115 acefbbce1c720e61785ed278c664b07c 156 Pfam PF01029 NusB family 11 150 5.2E-26 T 25-04-2016 IPR006027 NusB/RsmB/TIM44 GO:0003723|GO:0006355 RJP_RS01115 acefbbce1c720e61785ed278c664b07c 156 TIGRFAM TIGR01951 nusB: transcription antitermination factor NusB 9 151 3.3E-33 T 25-04-2016 IPR011605 NusB antitermination factor GO:0006353 RJP_RS01115 acefbbce1c720e61785ed278c664b07c 156 PANTHER PTHR11078 1 151 9.3E-22 T 25-04-2016 IPR011605 NusB antitermination factor GO:0006353 RJP_RS01115 acefbbce1c720e61785ed278c664b07c 156 Hamap MF_00073 N utilization substance protein B homolog [nusB]. 6 153 18.541 T 25-04-2016 IPR011605 NusB antitermination factor GO:0006353 RJP_RS00950 462af4e3d32f076c6c42a8dd0a58ee15 699 Gene3D G3DSA:3.30.70.870 405 479 1.9E-37 T 25-04-2016 RJP_RS00950 462af4e3d32f076c6c42a8dd0a58ee15 699 Gene3D G3DSA:3.40.50.300 4 284 2.7E-108 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RJP_RS00950 462af4e3d32f076c6c42a8dd0a58ee15 699 PANTHER PTHR23115 302 699 0.0 T 25-04-2016 RJP_RS00950 462af4e3d32f076c6c42a8dd0a58ee15 699 PANTHER PTHR23115 4 177 0.0 T 25-04-2016 RJP_RS00950 462af4e3d32f076c6c42a8dd0a58ee15 699 PANTHER PTHR23115 254 282 0.0 T 25-04-2016 RJP_RS00950 462af4e3d32f076c6c42a8dd0a58ee15 699 SUPERFAMILY SSF54211 481 607 3.03E-38 T 25-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold RJP_RS00950 462af4e3d32f076c6c42a8dd0a58ee15 699 Pfam PF14492 Elongation Factor G, domain II 403 476 3.1E-33 T 25-04-2016 IPR009022 Elongation factor G, III-V domain RJP_RS00950 462af4e3d32f076c6c42a8dd0a58ee15 699 SMART SM00838 608 695 9.1E-52 T 25-04-2016 IPR000640 Translation elongation factor EFG, V domain RJP_RS00950 462af4e3d32f076c6c42a8dd0a58ee15 699 PRINTS PR00315 GTP-binding elongation factor signature 58 66 1.3E-15 T 25-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 RJP_RS00950 462af4e3d32f076c6c42a8dd0a58ee15 699 PRINTS PR00315 GTP-binding elongation factor signature 78 88 1.3E-15 T 25-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 RJP_RS00950 462af4e3d32f076c6c42a8dd0a58ee15 699 PRINTS PR00315 GTP-binding elongation factor signature 12 25 1.3E-15 T 25-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 RJP_RS00950 462af4e3d32f076c6c42a8dd0a58ee15 699 PRINTS PR00315 GTP-binding elongation factor signature 94 105 1.3E-15 T 25-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 RJP_RS00950 462af4e3d32f076c6c42a8dd0a58ee15 699 PRINTS PR00315 GTP-binding elongation factor signature 130 139 1.3E-15 T 25-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 RJP_RS00950 462af4e3d32f076c6c42a8dd0a58ee15 699 PANTHER PTHR23115:SF66 302 699 0.0 T 25-04-2016 RJP_RS00950 462af4e3d32f076c6c42a8dd0a58ee15 699 PANTHER PTHR23115:SF66 4 177 0.0 T 25-04-2016 RJP_RS00950 462af4e3d32f076c6c42a8dd0a58ee15 699 PANTHER PTHR23115:SF66 254 282 0.0 T 25-04-2016 RJP_RS00950 462af4e3d32f076c6c42a8dd0a58ee15 699 SMART SM00889 479 606 1.5E-61 T 25-04-2016 IPR005517 Translation elongation factor EFG/EF2, domain IV GO:0005525 RJP_RS00950 462af4e3d32f076c6c42a8dd0a58ee15 699 SUPERFAMILY SSF54980 403 480 5.76E-24 T 25-04-2016 IPR009022 Elongation factor G, III-V domain RJP_RS00950 462af4e3d32f076c6c42a8dd0a58ee15 699 Pfam PF00009 Elongation factor Tu GTP binding domain 9 281 8.8E-71 T 25-04-2016 RJP_RS00950 462af4e3d32f076c6c42a8dd0a58ee15 699 Pfam PF00679 Elongation factor G C-terminus 609 693 3.9E-32 T 25-04-2016 IPR000640 Translation elongation factor EFG, V domain RJP_RS00950 462af4e3d32f076c6c42a8dd0a58ee15 699 Hamap MF_00054_B Elongation factor G [fusA]. 6 699 109.476 T 25-04-2016 IPR004540 Translation elongation factor EFG/EF2 GO:0003746|GO:0005525|GO:0005622|GO:0006414 RJP_RS00950 462af4e3d32f076c6c42a8dd0a58ee15 699 SUPERFAMILY SSF50447 264 403 8.08E-35 T 25-04-2016 IPR009000 Translation protein, beta-barrel domain RJP_RS00950 462af4e3d32f076c6c42a8dd0a58ee15 699 SUPERFAMILY SSF52540 6 281 1.44E-111 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RJP_RS00950 462af4e3d32f076c6c42a8dd0a58ee15 699 Gene3D G3DSA:3.30.70.240 608 692 4.3E-34 T 25-04-2016 IPR000640 Translation elongation factor EFG, V domain RJP_RS00950 462af4e3d32f076c6c42a8dd0a58ee15 699 Gene3D G3DSA:3.30.230.10 483 607 9.8E-42 T 25-04-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup RJP_RS00950 462af4e3d32f076c6c42a8dd0a58ee15 699 Pfam PF03764 Elongation factor G, domain IV 478 605 2.8E-39 T 25-04-2016 IPR005517 Translation elongation factor EFG/EF2, domain IV GO:0005525 RJP_RS00950 462af4e3d32f076c6c42a8dd0a58ee15 699 TIGRFAM TIGR00484 EF-G: translation elongation factor G 1 698 0.0 T 25-04-2016 IPR004540 Translation elongation factor EFG/EF2 GO:0003746|GO:0005525|GO:0005622|GO:0006414 RJP_RS00950 462af4e3d32f076c6c42a8dd0a58ee15 699 Gene3D G3DSA:2.40.30.10 306 404 7.5E-37 T 25-04-2016 RJP_RS00950 462af4e3d32f076c6c42a8dd0a58ee15 699 SUPERFAMILY SSF54980 611 695 2.78E-30 T 25-04-2016 IPR009022 Elongation factor G, III-V domain RJP_RS00950 462af4e3d32f076c6c42a8dd0a58ee15 699 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 10 180 1.0E-34 T 25-04-2016 IPR005225 Small GTP-binding protein domain GO:0005525 RJP_RS00950 462af4e3d32f076c6c42a8dd0a58ee15 699 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 51 66 - T 25-04-2016 IPR031157 Tr-type G domain, conserved site RJP_RS00950 462af4e3d32f076c6c42a8dd0a58ee15 699 Pfam PF03144 Elongation factor Tu domain 2 323 389 8.6E-16 T 25-04-2016 IPR004161 Translation elongation factor EFTu/EF1A, domain 2 GO:0005525 RJP_RS01020 a1135698ed54fbcaa9fbe34d6fe332c3 602 Pfam PF02938 GAD domain 315 407 3.6E-21 T 25-04-2016 IPR029351 GAD domain RJP_RS01020 a1135698ed54fbcaa9fbe34d6fe332c3 602 Gene3D G3DSA:3.30.1360.30 284 416 9.7E-44 T 25-04-2016 IPR004115 GAD-like domain GO:0004812|GO:0005524|GO:0005737 RJP_RS01020 a1135698ed54fbcaa9fbe34d6fe332c3 602 Pfam PF01336 OB-fold nucleic acid binding domain 21 97 3.1E-13 T 25-04-2016 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type GO:0003676 RJP_RS01020 a1135698ed54fbcaa9fbe34d6fe332c3 602 Gene3D G3DSA:2.40.50.140 4 110 2.8E-34 T 25-04-2016 IPR012340 Nucleic acid-binding, OB-fold RJP_RS01020 a1135698ed54fbcaa9fbe34d6fe332c3 602 Gene3D G3DSA:3.30.930.10 137 283 9.2E-99 T 25-04-2016 RJP_RS01020 a1135698ed54fbcaa9fbe34d6fe332c3 602 Gene3D G3DSA:3.30.930.10 417 591 9.2E-99 T 25-04-2016 RJP_RS01020 a1135698ed54fbcaa9fbe34d6fe332c3 602 Pfam PF00152 tRNA synthetases class II (D, K and N) 123 565 7.9E-91 T 25-04-2016 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 RJP_RS01020 a1135698ed54fbcaa9fbe34d6fe332c3 602 SUPERFAMILY SSF55261 296 422 1.28E-35 T 25-04-2016 IPR004115 GAD-like domain GO:0004812|GO:0005524|GO:0005737 RJP_RS01020 a1135698ed54fbcaa9fbe34d6fe332c3 602 TIGRFAM TIGR00459 aspS_bact: aspartate--tRNA ligase 5 590 2.0E-191 T 25-04-2016 IPR004524 Aspartate-tRNA ligase, bacterial/mitochondrial-type GO:0005524|GO:0016874 RJP_RS01020 a1135698ed54fbcaa9fbe34d6fe332c3 602 PANTHER PTHR22594:SF5 373 579 4.2E-205 T 25-04-2016 IPR004524 Aspartate-tRNA ligase, bacterial/mitochondrial-type GO:0005524|GO:0016874 RJP_RS01020 a1135698ed54fbcaa9fbe34d6fe332c3 602 PANTHER PTHR22594:SF5 4 304 4.2E-205 T 25-04-2016 IPR004524 Aspartate-tRNA ligase, bacterial/mitochondrial-type GO:0005524|GO:0016874 RJP_RS01020 a1135698ed54fbcaa9fbe34d6fe332c3 602 PANTHER PTHR22594 373 579 4.2E-205 T 25-04-2016 IPR018150 Aminoacyl-tRNA synthetase, class II (D/K/N)-like GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 RJP_RS01020 a1135698ed54fbcaa9fbe34d6fe332c3 602 PANTHER PTHR22594 4 304 4.2E-205 T 25-04-2016 IPR018150 Aminoacyl-tRNA synthetase, class II (D/K/N)-like GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 RJP_RS01020 a1135698ed54fbcaa9fbe34d6fe332c3 602 SUPERFAMILY SSF55681 428 590 4.21E-94 T 25-04-2016 RJP_RS01020 a1135698ed54fbcaa9fbe34d6fe332c3 602 SUPERFAMILY SSF55681 114 299 4.21E-94 T 25-04-2016 RJP_RS01020 a1135698ed54fbcaa9fbe34d6fe332c3 602 PRINTS PR01042 Aspartyl-tRNA synthetase signature 482 498 2.1E-21 T 25-04-2016 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 RJP_RS01020 a1135698ed54fbcaa9fbe34d6fe332c3 602 PRINTS PR01042 Aspartyl-tRNA synthetase signature 195 207 2.1E-21 T 25-04-2016 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 RJP_RS01020 a1135698ed54fbcaa9fbe34d6fe332c3 602 PRINTS PR01042 Aspartyl-tRNA synthetase signature 526 540 2.1E-21 T 25-04-2016 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 RJP_RS01020 a1135698ed54fbcaa9fbe34d6fe332c3 602 PRINTS PR01042 Aspartyl-tRNA synthetase signature 212 225 2.1E-21 T 25-04-2016 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 RJP_RS01020 a1135698ed54fbcaa9fbe34d6fe332c3 602 SUPERFAMILY SSF50249 4 108 2.1E-30 T 25-04-2016 IPR012340 Nucleic acid-binding, OB-fold RJP_RS01020 a1135698ed54fbcaa9fbe34d6fe332c3 602 Hamap MF_00044 Aspartate--tRNA(Asp) ligase [aspS]. 4 571 33.745 T 25-04-2016 RJP_RS05110 f3c27904bd2f64b1d8b451bba7c8ac8c 340 TIGRFAM TIGR02027 rpoA: DNA-directed RNA polymerase, alpha subunit 29 319 6.8E-107 T 25-04-2016 IPR011773 DNA-directed RNA polymerase, alpha subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 RJP_RS05110 f3c27904bd2f64b1d8b451bba7c8ac8c 340 PANTHER PTHR32108 3 332 4.7E-125 T 25-04-2016 RJP_RS05110 f3c27904bd2f64b1d8b451bba7c8ac8c 340 Hamap MF_00059 DNA-directed RNA polymerase subunit alpha [rpoA]. 8 319 34.681 T 25-04-2016 IPR011773 DNA-directed RNA polymerase, alpha subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 RJP_RS05110 f3c27904bd2f64b1d8b451bba7c8ac8c 340 Pfam PF03118 Bacterial RNA polymerase, alpha chain C terminal domain 253 310 8.7E-25 T 25-04-2016 IPR011260 RNA polymerase, alpha subunit, C-terminal GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 RJP_RS05110 f3c27904bd2f64b1d8b451bba7c8ac8c 340 SUPERFAMILY SSF56553 58 178 3.01E-39 T 25-04-2016 IPR011262 DNA-directed RNA polymerase, insert domain GO:0003899|GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 RJP_RS05110 f3c27904bd2f64b1d8b451bba7c8ac8c 340 Pfam PF01000 RNA polymerase Rpb3/RpoA insert domain 69 158 1.5E-23 T 25-04-2016 IPR011262 DNA-directed RNA polymerase, insert domain GO:0003899|GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 RJP_RS05110 f3c27904bd2f64b1d8b451bba7c8ac8c 340 Gene3D G3DSA:2.170.120.12 72 178 6.2E-41 T 25-04-2016 IPR011262 DNA-directed RNA polymerase, insert domain GO:0003899|GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 RJP_RS05110 f3c27904bd2f64b1d8b451bba7c8ac8c 340 ProDom PD001179 RNA POLYMERASE ALPHA DNA-DIRECTED SUBUNIT CHAIN NUCLEOTIDYLTRANSFERASE TRANSFERASE TRANSCRIPTION TRANSCRIPTASE 259 330 4.0E-36 T 25-04-2016 IPR011260 RNA polymerase, alpha subunit, C-terminal GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 RJP_RS05110 f3c27904bd2f64b1d8b451bba7c8ac8c 340 Gene3D G3DSA:1.10.150.20 250 330 6.2E-35 T 25-04-2016 RJP_RS05110 f3c27904bd2f64b1d8b451bba7c8ac8c 340 Gene3D G3DSA:3.30.1360.10 22 71 1.6E-9 T 25-04-2016 RJP_RS05110 f3c27904bd2f64b1d8b451bba7c8ac8c 340 SMART SM00662 28 235 9.7E-93 T 25-04-2016 IPR011263 DNA-directed RNA polymerase, RpoA/D/Rpb3-type GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 RJP_RS05110 f3c27904bd2f64b1d8b451bba7c8ac8c 340 PANTHER PTHR32108:SF0 3 332 4.7E-125 T 25-04-2016 RJP_RS05110 f3c27904bd2f64b1d8b451bba7c8ac8c 340 SUPERFAMILY SSF47789 253 328 4.58E-27 T 25-04-2016 RJP_RS05110 f3c27904bd2f64b1d8b451bba7c8ac8c 340 SUPERFAMILY SSF55257 8 58 5.1E-28 T 25-04-2016 IPR009025 DNA-directed RNA polymerase, RBP11-like dimerisation domain GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 RJP_RS05110 f3c27904bd2f64b1d8b451bba7c8ac8c 340 SUPERFAMILY SSF55257 180 232 5.1E-28 T 25-04-2016 IPR009025 DNA-directed RNA polymerase, RBP11-like dimerisation domain GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 RJP_RS05110 f3c27904bd2f64b1d8b451bba7c8ac8c 340 Pfam PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain 34 229 2.1E-20 T 25-04-2016 IPR009025 DNA-directed RNA polymerase, RBP11-like dimerisation domain GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 RJP_RS06835 e046c95f544efcde6346f4b85acbb6a6 240 SMART SM00382 26 210 5.2E-17 T 25-04-2016 IPR003593 AAA+ ATPase domain RJP_RS06835 e046c95f544efcde6346f4b85acbb6a6 240 SUPERFAMILY SSF52540 1 231 2.08E-67 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RJP_RS06835 e046c95f544efcde6346f4b85acbb6a6 240 PANTHER PTHR24220:SF327 3 236 1.6E-103 T 25-04-2016 RJP_RS06835 e046c95f544efcde6346f4b85acbb6a6 240 Pfam PF00005 ABC transporter 18 163 2.3E-36 T 25-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 RJP_RS06835 e046c95f544efcde6346f4b85acbb6a6 240 PIRSF PIRSF039085 1 238 1.1E-84 T 25-04-2016 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type GO:0003333|GO:0015424 RJP_RS06835 e046c95f544efcde6346f4b85acbb6a6 240 PANTHER PTHR24220 3 236 1.6E-103 T 25-04-2016 RJP_RS06835 e046c95f544efcde6346f4b85acbb6a6 240 Gene3D G3DSA:3.40.50.300 1 233 2.1E-75 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RJP_RS04125 b4791c2bdb97768e930ce9237f7d146a 120 SUPERFAMILY SSF48371 1 89 1.3E-8 T 25-04-2016 IPR016024 Armadillo-type fold GO:0005488 RJP_RS04125 b4791c2bdb97768e930ce9237f7d146a 120 Gene3D G3DSA:1.25.10.10 3 109 3.6E-8 T 25-04-2016 IPR011989 Armadillo-like helical RJP_RS02010 b4791c2bdb97768e930ce9237f7d146a 120 SUPERFAMILY SSF48371 1 89 1.3E-8 T 25-04-2016 IPR016024 Armadillo-type fold GO:0005488 RJP_RS02010 b4791c2bdb97768e930ce9237f7d146a 120 Gene3D G3DSA:1.25.10.10 3 109 3.6E-8 T 25-04-2016 IPR011989 Armadillo-like helical RJP_RS06640 712a3f3be73d1b71ab9847d49d57f691 414 TIGRFAM TIGR01821 5aminolev_synth: 5-aminolevulinic acid synthase 3 398 3.9E-197 T 25-04-2016 IPR010961 Tetrapyrrole biosynthesis, 5-aminolevulinic acid synthase GO:0003870|GO:0030170|GO:0033014 KEGG: 00260+2.3.1.37|KEGG: 00860+2.3.1.37|MetaCyc: PWY-5189|MetaCyc: PWY-7536|Reactome: REACT_9431|UniPathway: UPA00251 RJP_RS06640 712a3f3be73d1b71ab9847d49d57f691 414 PANTHER PTHR13693 4 411 1.3E-211 T 25-04-2016 RJP_RS06640 712a3f3be73d1b71ab9847d49d57f691 414 Pfam PF00155 Aminotransferase class I and II 43 383 2.6E-69 T 25-04-2016 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 RJP_RS06640 712a3f3be73d1b71ab9847d49d57f691 414 Gene3D G3DSA:3.40.640.10 58 279 8.9E-82 T 25-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 RJP_RS06640 712a3f3be73d1b71ab9847d49d57f691 414 Gene3D G3DSA:3.90.1150.10 280 390 1.1E-23 T 25-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 RJP_RS06640 712a3f3be73d1b71ab9847d49d57f691 414 ProSitePatterns PS00599 Aminotransferases class-II pyridoxal-phosphate attachment site. 241 250 - T 25-04-2016 IPR001917 Aminotransferase, class-II, pyridoxal-phosphate binding site GO:0008152|GO:0016740 RJP_RS06640 712a3f3be73d1b71ab9847d49d57f691 414 PANTHER PTHR13693:SF57 4 411 1.3E-211 T 25-04-2016 RJP_RS06640 712a3f3be73d1b71ab9847d49d57f691 414 SUPERFAMILY SSF53383 3 394 2.04E-98 T 25-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase RJP_RS02320 78a21f649f5eab215d365c514abca5e1 119 ProSitePatterns PS00892 HIT domain signature. 90 108 - T 25-04-2016 IPR019808 Histidine triad, conserved site RJP_RS02320 78a21f649f5eab215d365c514abca5e1 119 PANTHER PTHR23089:SF2 3 112 4.2E-35 T 25-04-2016 RJP_RS02320 78a21f649f5eab215d365c514abca5e1 119 PRINTS PR00332 Histidine triad family signature 28 46 7.8E-17 T 25-04-2016 IPR001310 Histidine triad (HIT) protein RJP_RS02320 78a21f649f5eab215d365c514abca5e1 119 PRINTS PR00332 Histidine triad family signature 97 107 7.8E-17 T 25-04-2016 IPR001310 Histidine triad (HIT) protein RJP_RS02320 78a21f649f5eab215d365c514abca5e1 119 PRINTS PR00332 Histidine triad family signature 7 23 7.8E-17 T 25-04-2016 IPR001310 Histidine triad (HIT) protein RJP_RS02320 78a21f649f5eab215d365c514abca5e1 119 SUPERFAMILY SSF54197 2 109 1.7E-28 T 25-04-2016 IPR011146 HIT-like domain GO:0003824 RJP_RS02320 78a21f649f5eab215d365c514abca5e1 119 PANTHER PTHR23089 3 112 4.2E-35 T 25-04-2016 IPR001310 Histidine triad (HIT) protein RJP_RS02320 78a21f649f5eab215d365c514abca5e1 119 Pfam PF01230 HIT domain 16 111 9.4E-21 T 25-04-2016 IPR001310 Histidine triad (HIT) protein RJP_RS02320 78a21f649f5eab215d365c514abca5e1 119 Gene3D G3DSA:3.30.428.10 3 111 3.1E-30 T 25-04-2016 IPR011146 HIT-like domain GO:0003824 RJP_RS05880 0bcd6c245120ded793f1005859261b37 216 Pfam PF02230 Phospholipase/Carboxylesterase 6 210 3.2E-59 T 25-04-2016 IPR003140 Phospholipase/carboxylesterase/thioesterase GO:0016787 RJP_RS05880 0bcd6c245120ded793f1005859261b37 216 Gene3D G3DSA:3.40.50.1820 11 211 4.3E-30 T 25-04-2016 IPR029058 Alpha/Beta hydrolase fold RJP_RS05880 0bcd6c245120ded793f1005859261b37 216 PANTHER PTHR10655 7 211 2.0E-22 T 25-04-2016 RJP_RS05880 0bcd6c245120ded793f1005859261b37 216 PANTHER PTHR10655:SF17 7 211 2.0E-22 T 25-04-2016 RJP_RS05880 0bcd6c245120ded793f1005859261b37 216 SUPERFAMILY SSF53474 13 210 1.65E-29 T 25-04-2016 IPR029058 Alpha/Beta hydrolase fold RJP_RS05470 f77093c40a3daaeb868ace12957b0fcc 812 Pfam PF08264 Anticodon-binding domain of tRNA 624 771 9.1E-31 T 25-04-2016 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding GO:0000166|GO:0006418 Reactome: REACT_71 RJP_RS05470 f77093c40a3daaeb868ace12957b0fcc 812 Gene3D G3DSA:3.90.740.10 193 336 3.8E-40 T 25-04-2016 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 Reactome: REACT_71 RJP_RS05470 f77093c40a3daaeb868ace12957b0fcc 812 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 16 573 6.4E-114 T 25-04-2016 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 RJP_RS05470 f77093c40a3daaeb868ace12957b0fcc 812 Hamap MF_02005 Valine--tRNA ligase [valS]. 4 799 29.001 T 25-04-2016 IPR022874 Valine-tRNA ligase, type 2 GO:0004832 KEGG: 00970+6.1.1.9 RJP_RS05470 f77093c40a3daaeb868ace12957b0fcc 812 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 46 57 - T 25-04-2016 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 RJP_RS05470 f77093c40a3daaeb868ace12957b0fcc 812 PRINTS PR00986 Valyl-tRNA synthetase signature 452 473 1.1E-16 T 25-04-2016 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9|Reactome: REACT_71 RJP_RS05470 f77093c40a3daaeb868ace12957b0fcc 812 PRINTS PR00986 Valyl-tRNA synthetase signature 39 50 1.1E-16 T 25-04-2016 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9|Reactome: REACT_71 RJP_RS05470 f77093c40a3daaeb868ace12957b0fcc 812 PRINTS PR00986 Valyl-tRNA synthetase signature 488 506 1.1E-16 T 25-04-2016 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9|Reactome: REACT_71 RJP_RS05470 f77093c40a3daaeb868ace12957b0fcc 812 PRINTS PR00986 Valyl-tRNA synthetase signature 229 246 1.1E-16 T 25-04-2016 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9|Reactome: REACT_71 RJP_RS05470 f77093c40a3daaeb868ace12957b0fcc 812 PRINTS PR00986 Valyl-tRNA synthetase signature 345 358 1.1E-16 T 25-04-2016 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9|Reactome: REACT_71 RJP_RS05470 f77093c40a3daaeb868ace12957b0fcc 812 SUPERFAMILY SSF50677 191 340 4.58E-46 T 25-04-2016 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 Reactome: REACT_71 RJP_RS05470 f77093c40a3daaeb868ace12957b0fcc 812 Gene3D G3DSA:1.10.730.10 576 726 7.2E-39 T 25-04-2016 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 RJP_RS05470 f77093c40a3daaeb868ace12957b0fcc 812 PANTHER PTHR11946 1 796 3.2E-224 T 25-04-2016 RJP_RS05470 f77093c40a3daaeb868ace12957b0fcc 812 SUPERFAMILY SSF47323 587 805 5.61E-42 T 25-04-2016 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 RJP_RS05470 f77093c40a3daaeb868ace12957b0fcc 812 TIGRFAM TIGR00422 valS: valine--tRNA ligase 5 807 6.0E-209 T 25-04-2016 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9|Reactome: REACT_71 RJP_RS05470 f77093c40a3daaeb868ace12957b0fcc 812 PANTHER PTHR11946:SF5 1 796 3.2E-224 T 25-04-2016 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9|Reactome: REACT_71 RJP_RS05470 f77093c40a3daaeb868ace12957b0fcc 812 SUPERFAMILY SSF52374 2 190 7.93E-114 T 25-04-2016 RJP_RS05470 f77093c40a3daaeb868ace12957b0fcc 812 SUPERFAMILY SSF52374 340 582 7.93E-114 T 25-04-2016 RJP_RS05470 f77093c40a3daaeb868ace12957b0fcc 812 Gene3D G3DSA:3.40.50.620 343 567 4.9E-110 T 25-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold RJP_RS05470 f77093c40a3daaeb868ace12957b0fcc 812 Gene3D G3DSA:3.40.50.620 3 188 4.9E-110 T 25-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold RJP_RS02615 66c28398d921af0007be2c0cc2c25f5f 123 Pfam PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 27 123 8.5E-39 T 25-04-2016 IPR000440 NADH:ubiquinone/plastoquinone oxidoreductase, chain 3 GO:0008137|GO:0055114 RJP_RS02615 66c28398d921af0007be2c0cc2c25f5f 123 Hamap MF_01394 NAD(P)H-quinone oxidoreductase subunit 3, chloroplastic [ndhC]. 7 123 18.939 T 25-04-2016 IPR023043 NAD(P)H-quinone oxidoreductase subunit 3, bacterial/plastid GO:0016651|GO:0055114 RJP_RS02615 66c28398d921af0007be2c0cc2c25f5f 123 PANTHER PTHR11058:SF10 1 123 6.8E-57 T 25-04-2016 RJP_RS02615 66c28398d921af0007be2c0cc2c25f5f 123 PANTHER PTHR11058 1 123 6.8E-57 T 25-04-2016 IPR000440 NADH:ubiquinone/plastoquinone oxidoreductase, chain 3 GO:0008137|GO:0055114 RJP_RS03120 70e59d4cfc393aca66445162ed2b1205 226 PANTHER PTHR10291 5 226 1.2E-100 T 25-04-2016 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 RJP_RS03120 70e59d4cfc393aca66445162ed2b1205 226 SUPERFAMILY SSF64005 5 219 5.49E-76 T 25-04-2016 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 RJP_RS03120 70e59d4cfc393aca66445162ed2b1205 226 Gene3D G3DSA:3.40.1180.10 5 225 4.4E-83 T 25-04-2016 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 RJP_RS03120 70e59d4cfc393aca66445162ed2b1205 226 Pfam PF01255 Putative undecaprenyl diphosphate synthase 10 224 1.6E-75 T 25-04-2016 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 RJP_RS03120 70e59d4cfc393aca66445162ed2b1205 226 Hamap MF_01139 Ditrans,polycis-undecaprenyl-diphosphate synthase ((2E,6E)-farnesyl-diphosphate specific) [uppS]. 3 225 36.167 T 25-04-2016 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 RJP_RS03120 70e59d4cfc393aca66445162ed2b1205 226 ProSitePatterns PS01066 Undecaprenyl pyrophosphate synthase family signature. 170 187 - T 25-04-2016 IPR018520 Di-trans-poly-cis-decaprenylcistransferase-like, conserved site GO:0016765 RJP_RS03120 70e59d4cfc393aca66445162ed2b1205 226 TIGRFAM TIGR00055 uppS: di-trans,poly-cis-decaprenylcistransferase 5 224 5.0E-78 T 25-04-2016 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 RJP_RS06310 16c6e286c16f8a5993ca9a612db8a152 510 TIGRFAM TIGR00962 atpA: ATP synthase F1, alpha subunit 4 509 1.2E-262 T 25-04-2016 IPR005294 ATPase, F1 complex, alpha subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 RJP_RS06310 16c6e286c16f8a5993ca9a612db8a152 510 Pfam PF02874 ATP synthase alpha/beta family, beta-barrel domain 26 91 5.0E-16 T 25-04-2016 IPR004100 ATPase, F1 complex alpha/beta subunit, N-terminal domain GO:0015992|GO:0046034 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 RJP_RS06310 16c6e286c16f8a5993ca9a612db8a152 510 Gene3D G3DSA:3.40.50.300 95 379 2.5E-125 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RJP_RS06310 16c6e286c16f8a5993ca9a612db8a152 510 PANTHER PTHR15184:SF3 1 493 0.0 T 25-04-2016 IPR005294 ATPase, F1 complex, alpha subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 RJP_RS06310 16c6e286c16f8a5993ca9a612db8a152 510 SUPERFAMILY SSF47917 380 508 1.73E-45 T 25-04-2016 IPR000793 ATPase, F1/V1/A1 complex, alpha/beta subunit, C-terminal GO:0015991|GO:0016820|GO:0033178 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 RJP_RS06310 16c6e286c16f8a5993ca9a612db8a152 510 PANTHER PTHR15184 1 493 0.0 T 25-04-2016 RJP_RS06310 16c6e286c16f8a5993ca9a612db8a152 510 SUPERFAMILY SSF50615 10 94 9.68E-26 T 25-04-2016 IPR004100 ATPase, F1 complex alpha/beta subunit, N-terminal domain GO:0015992|GO:0046034 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 RJP_RS06310 16c6e286c16f8a5993ca9a612db8a152 510 Pfam PF00306 ATP synthase alpha/beta chain, C terminal domain 379 504 2.2E-49 T 25-04-2016 IPR000793 ATPase, F1/V1/A1 complex, alpha/beta subunit, C-terminal GO:0015991|GO:0016820|GO:0033178 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 RJP_RS06310 16c6e286c16f8a5993ca9a612db8a152 510 Gene3D G3DSA:2.40.30.20 1 92 1.7E-33 T 25-04-2016 IPR023366 ATP synthase subunit alpha-like domain KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 RJP_RS06310 16c6e286c16f8a5993ca9a612db8a152 510 Gene3D G3DSA:1.20.150.20 380 509 2.7E-53 T 25-04-2016 RJP_RS06310 16c6e286c16f8a5993ca9a612db8a152 510 PIRSF PIRSF039088 1 510 2.1E-274 T 25-04-2016 IPR005294 ATPase, F1 complex, alpha subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 RJP_RS06310 16c6e286c16f8a5993ca9a612db8a152 510 SUPERFAMILY SSF52540 96 378 1.19E-102 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RJP_RS06310 16c6e286c16f8a5993ca9a612db8a152 510 Hamap MF_01346 ATP synthase subunit alpha [atpA]. 1 509 52.104 T 25-04-2016 IPR005294 ATPase, F1 complex, alpha subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 RJP_RS06310 16c6e286c16f8a5993ca9a612db8a152 510 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 149 372 1.3E-75 T 25-04-2016 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 RJP_RS06310 16c6e286c16f8a5993ca9a612db8a152 510 ProSitePatterns PS00152 ATP synthase alpha and beta subunits signature. 363 372 - T 25-04-2016 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 RJP_RS06760 155008b739d94bfd6809db20398aad7a 634 Gene3D G3DSA:1.10.10.10 548 617 2.0E-30 T 25-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RJP_RS06760 155008b739d94bfd6809db20398aad7a 634 TIGRFAM TIGR02393 RpoD_Cterm: RNA polymerase sigma factor RpoD 381 618 2.2E-115 T 25-04-2016 IPR012760 RNA polymerase sigma factor RpoD, C-terminal GO:0003677|GO:0006352|GO:0006355|GO:0016987 RJP_RS06760 155008b739d94bfd6809db20398aad7a 634 Hamap MF_00963 RNA polymerase sigma factor RpoD [rpoD]. 5 619 42.446 T 25-04-2016 IPR028630 RNA polymerase sigma factor RpoD GO:0006352|GO:0016987 RJP_RS06760 155008b739d94bfd6809db20398aad7a 634 Pfam PF00140 Sigma-70 factor, region 1.2 104 134 1.1E-12 T 25-04-2016 IPR009042 RNA polymerase sigma-70 region 1.2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RJP_RS06760 155008b739d94bfd6809db20398aad7a 634 Pfam PF04539 Sigma-70 region 3 464 540 4.9E-25 T 25-04-2016 IPR007624 RNA polymerase sigma-70 region 3 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RJP_RS06760 155008b739d94bfd6809db20398aad7a 634 ProSitePatterns PS00715 Sigma-70 factors family signature 1. 409 422 - T 25-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RJP_RS06760 155008b739d94bfd6809db20398aad7a 634 PANTHER PTHR30603 339 625 5.3E-197 T 25-04-2016 RJP_RS06760 155008b739d94bfd6809db20398aad7a 634 PANTHER PTHR30603 11 158 5.3E-197 T 25-04-2016 RJP_RS06760 155008b739d94bfd6809db20398aad7a 634 Pfam PF04546 Sigma-70, non-essential region 146 354 9.1E-26 T 25-04-2016 IPR007631 RNA polymerase sigma factor 70, non-essential domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RJP_RS06760 155008b739d94bfd6809db20398aad7a 634 SUPERFAMILY SSF88946 121 452 3.3E-85 T 25-04-2016 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RJP_RS06760 155008b739d94bfd6809db20398aad7a 634 PANTHER PTHR30603:SF0 339 625 5.3E-197 T 25-04-2016 RJP_RS06760 155008b739d94bfd6809db20398aad7a 634 PANTHER PTHR30603:SF0 11 158 5.3E-197 T 25-04-2016 RJP_RS06760 155008b739d94bfd6809db20398aad7a 634 Gene3D G3DSA:1.10.10.10 458 509 5.2E-24 T 25-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RJP_RS06760 155008b739d94bfd6809db20398aad7a 634 Gene3D G3DSA:1.10.601.10 118 454 5.5E-104 T 25-04-2016 RJP_RS06760 155008b739d94bfd6809db20398aad7a 634 PRINTS PR00046 Major sigma-70 factor signature 433 441 1.2E-30 T 25-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RJP_RS06760 155008b739d94bfd6809db20398aad7a 634 PRINTS PR00046 Major sigma-70 factor signature 409 422 1.2E-30 T 25-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RJP_RS06760 155008b739d94bfd6809db20398aad7a 634 PRINTS PR00046 Major sigma-70 factor signature 594 605 1.2E-30 T 25-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RJP_RS06760 155008b739d94bfd6809db20398aad7a 634 PRINTS PR00046 Major sigma-70 factor signature 579 594 1.2E-30 T 25-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RJP_RS06760 155008b739d94bfd6809db20398aad7a 634 PRINTS PR00046 Major sigma-70 factor signature 558 570 1.2E-30 T 25-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RJP_RS06760 155008b739d94bfd6809db20398aad7a 634 SUPERFAMILY SSF88659 458 532 9.59E-19 T 25-04-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RJP_RS06760 155008b739d94bfd6809db20398aad7a 634 SUPERFAMILY SSF88659 519 615 6.73E-25 T 25-04-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RJP_RS06760 155008b739d94bfd6809db20398aad7a 634 Pfam PF03979 Sigma-70 factor, region 1.1 10 89 7.6E-11 T 25-04-2016 IPR007127 RNA polymerase sigma factor 70, region 1.1 GO:0003677|GO:0006355 RJP_RS06760 155008b739d94bfd6809db20398aad7a 634 ProSitePatterns PS00716 Sigma-70 factors family signature 2. 579 605 - T 25-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RJP_RS06760 155008b739d94bfd6809db20398aad7a 634 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 381 608 1.2E-39 T 25-04-2016 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RJP_RS06760 155008b739d94bfd6809db20398aad7a 634 Pfam PF04542 Sigma-70 region 2 385 454 1.9E-21 T 25-04-2016 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RJP_RS06760 155008b739d94bfd6809db20398aad7a 634 Pfam PF04545 Sigma-70, region 4 554 607 1.9E-18 T 25-04-2016 IPR007630 RNA polymerase sigma-70 region 4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RJP_RS01040 ab222f7b15ab0a4f96a3a3c893aed28e 159 SMART SM00903 14 158 2.5E-47 T 25-04-2016 IPR002563 Flavin reductase like domain GO:0010181 RJP_RS01040 ab222f7b15ab0a4f96a3a3c893aed28e 159 Pfam PF01613 Flavin reductase like domain 14 158 2.8E-38 T 25-04-2016 IPR002563 Flavin reductase like domain GO:0010181 RJP_RS01040 ab222f7b15ab0a4f96a3a3c893aed28e 159 PANTHER PTHR30466 4 159 5.5E-43 T 25-04-2016 RJP_RS01040 ab222f7b15ab0a4f96a3a3c893aed28e 159 Gene3D G3DSA:2.30.110.10 7 159 3.5E-53 T 25-04-2016 IPR012349 FMN-binding split barrel GO:0010181|GO:0016491|GO:0055114 UniPathway: UPA00647 RJP_RS01040 ab222f7b15ab0a4f96a3a3c893aed28e 159 PANTHER PTHR30466:SF1 4 159 5.5E-43 T 25-04-2016 RJP_RS01040 ab222f7b15ab0a4f96a3a3c893aed28e 159 SUPERFAMILY SSF50475 7 157 9.32E-48 T 25-04-2016 IPR012349 FMN-binding split barrel GO:0010181|GO:0016491|GO:0055114 UniPathway: UPA00647 RJP_RS02670 6d25d50f3c8d656c7f3b031136316266 267 Gene3D G3DSA:3.40.80.10 25 174 4.9E-25 T 25-04-2016 IPR002502 N-acetylmuramoyl-L-alanine amidase domain GO:0008745|GO:0009253 RJP_RS02670 6d25d50f3c8d656c7f3b031136316266 267 SUPERFAMILY SSF47090 186 232 2.55E-5 T 25-04-2016 IPR002477 Peptidoglycan binding-like RJP_RS02670 6d25d50f3c8d656c7f3b031136316266 267 Gene3D G3DSA:1.10.101.10 187 232 1.8E-5 T 25-04-2016 IPR002477 Peptidoglycan binding-like RJP_RS02670 6d25d50f3c8d656c7f3b031136316266 267 SUPERFAMILY SSF55846 20 175 2.73E-26 T 25-04-2016 IPR002502 N-acetylmuramoyl-L-alanine amidase domain GO:0008745|GO:0009253 RJP_RS02670 6d25d50f3c8d656c7f3b031136316266 267 PANTHER PTHR30417 53 231 2.7E-15 T 25-04-2016 RJP_RS02670 6d25d50f3c8d656c7f3b031136316266 267 Pfam PF01510 N-acetylmuramoyl-L-alanine amidase 31 140 1.1E-6 T 25-04-2016 IPR002502 N-acetylmuramoyl-L-alanine amidase domain GO:0008745|GO:0009253 RJP_RS02670 6d25d50f3c8d656c7f3b031136316266 267 Pfam PF01471 Putative peptidoglycan binding domain 193 231 1.5E-5 T 25-04-2016 IPR002477 Peptidoglycan binding-like RJP_RS01250 cff0c159a10ca5aca403098875149be9 928 Pfam PF16870 2-oxoglutarate dehydrogenase C-terminal 783 926 1.8E-49 T 25-04-2016 IPR031717 Multifunctional 2-oxoglutarate metabolism enzyme, C-terminal KEGG: 00020+1.2.4.2|KEGG: 00310+1.2.4.2|KEGG: 00380+1.2.4.2|MetaCyc: PWY-5084 RJP_RS01250 cff0c159a10ca5aca403098875149be9 928 SUPERFAMILY SSF52518 118 519 9.64E-74 T 25-04-2016 IPR029061 Thiamin diphosphate-binding fold RJP_RS01250 cff0c159a10ca5aca403098875149be9 928 SMART SM00861 585 778 4.8E-58 T 25-04-2016 IPR005475 Transketolase-like, pyrimidine-binding domain RJP_RS01250 cff0c159a10ca5aca403098875149be9 928 PIRSF PIRSF000157 1 928 0.0 T 25-04-2016 IPR011603 2-oxoglutarate dehydrogenase E1 component GO:0004591|GO:0006099|GO:0030976|GO:0055114 KEGG: 00020+1.2.4.2|KEGG: 00310+1.2.4.2|KEGG: 00380+1.2.4.2|MetaCyc: PWY-5084 RJP_RS01250 cff0c159a10ca5aca403098875149be9 928 Pfam PF16078 2-oxoglutarate dehydrogenase N-terminus 10 46 3.6E-15 T 25-04-2016 IPR032106 2-oxoglutarate dehydrogenase E1 component, N-terminal domain KEGG: 00020+1.2.4.2|KEGG: 00310+1.2.4.2|KEGG: 00380+1.2.4.2|MetaCyc: PWY-5084 RJP_RS01250 cff0c159a10ca5aca403098875149be9 928 PANTHER PTHR23152 10 928 0.0 T 25-04-2016 IPR011603 2-oxoglutarate dehydrogenase E1 component GO:0004591|GO:0006099|GO:0030976|GO:0055114 KEGG: 00020+1.2.4.2|KEGG: 00310+1.2.4.2|KEGG: 00380+1.2.4.2|MetaCyc: PWY-5084 RJP_RS01250 cff0c159a10ca5aca403098875149be9 928 Pfam PF02779 Transketolase, pyrimidine binding domain 584 779 1.9E-64 T 25-04-2016 IPR005475 Transketolase-like, pyrimidine-binding domain RJP_RS01250 cff0c159a10ca5aca403098875149be9 928 SUPERFAMILY SSF52518 570 785 5.3E-49 T 25-04-2016 IPR029061 Thiamin diphosphate-binding fold RJP_RS01250 cff0c159a10ca5aca403098875149be9 928 Pfam PF00676 Dehydrogenase E1 component 204 520 1.0E-52 T 25-04-2016 IPR001017 Dehydrogenase, E1 component GO:0008152|GO:0016624 RJP_RS01250 cff0c159a10ca5aca403098875149be9 928 TIGRFAM TIGR00239 2oxo_dh_E1: oxoglutarate dehydrogenase (succinyl-transferring), E1 component 11 925 0.0 T 25-04-2016 IPR011603 2-oxoglutarate dehydrogenase E1 component GO:0004591|GO:0006099|GO:0030976|GO:0055114 KEGG: 00020+1.2.4.2|KEGG: 00310+1.2.4.2|KEGG: 00380+1.2.4.2|MetaCyc: PWY-5084 RJP_RS01250 cff0c159a10ca5aca403098875149be9 928 Gene3D G3DSA:3.40.50.970 155 519 9.0E-67 T 25-04-2016 IPR029061 Thiamin diphosphate-binding fold RJP_RS01250 cff0c159a10ca5aca403098875149be9 928 Gene3D G3DSA:3.40.50.970 583 781 1.1E-22 T 25-04-2016 IPR029061 Thiamin diphosphate-binding fold RJP_RS06910 ab014e0e18c0a8c0f7a5ecac531e3683 247 SMART SM00644 6 149 5.1E-23 T 25-04-2016 IPR002502 N-acetylmuramoyl-L-alanine amidase domain GO:0008745|GO:0009253 RJP_RS06910 ab014e0e18c0a8c0f7a5ecac531e3683 247 SUPERFAMILY SSF55846 7 165 2.75E-51 T 25-04-2016 IPR002502 N-acetylmuramoyl-L-alanine amidase domain GO:0008745|GO:0009253 RJP_RS06910 ab014e0e18c0a8c0f7a5ecac531e3683 247 Pfam PF01510 N-acetylmuramoyl-L-alanine amidase 16 150 4.4E-22 T 25-04-2016 IPR002502 N-acetylmuramoyl-L-alanine amidase domain GO:0008745|GO:0009253 RJP_RS06910 ab014e0e18c0a8c0f7a5ecac531e3683 247 Gene3D G3DSA:3.40.80.10 3 168 2.3E-58 T 25-04-2016 IPR002502 N-acetylmuramoyl-L-alanine amidase domain GO:0008745|GO:0009253 RJP_RS06910 ab014e0e18c0a8c0f7a5ecac531e3683 247 PANTHER PTHR30417 1 247 1.6E-81 T 25-04-2016 RJP_RS06910 ab014e0e18c0a8c0f7a5ecac531e3683 247 PANTHER PTHR30417:SF5 1 247 1.6E-81 T 25-04-2016 RJP_RS06910 ab014e0e18c0a8c0f7a5ecac531e3683 247 SUPERFAMILY SSF47090 177 242 5.49E-18 T 25-04-2016 IPR002477 Peptidoglycan binding-like RJP_RS06910 ab014e0e18c0a8c0f7a5ecac531e3683 247 Pfam PF01471 Putative peptidoglycan binding domain 181 235 4.0E-6 T 25-04-2016 IPR002477 Peptidoglycan binding-like RJP_RS01760 d75e08f38c39bae41e4211bf077f4ef2 350 Gene3D G3DSA:2.40.50.100 56 87 6.2E-12 T 25-04-2016 RJP_RS01760 d75e08f38c39bae41e4211bf077f4ef2 350 Gene3D G3DSA:2.40.50.100 218 251 6.2E-12 T 25-04-2016 RJP_RS01760 d75e08f38c39bae41e4211bf077f4ef2 350 Pfam PF13533 Biotin-lipoyl like 56 101 4.9E-13 T 25-04-2016 RJP_RS01760 d75e08f38c39bae41e4211bf077f4ef2 350 SUPERFAMILY SSF111369 54 100 1.96E-9 T 25-04-2016 RJP_RS01760 d75e08f38c39bae41e4211bf077f4ef2 350 SUPERFAMILY SSF111369 145 184 1.96E-9 T 25-04-2016 RJP_RS01760 d75e08f38c39bae41e4211bf077f4ef2 350 PANTHER PTHR30386 22 348 9.3E-65 T 25-04-2016 RJP_RS01760 d75e08f38c39bae41e4211bf077f4ef2 350 PANTHER PTHR30386:SF7 22 348 9.3E-65 T 25-04-2016 RJP_RS01760 d75e08f38c39bae41e4211bf077f4ef2 350 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 157 298 3.4E-14 T 25-04-2016 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain RJP_RS01760 d75e08f38c39bae41e4211bf077f4ef2 350 SUPERFAMILY SSF111369 214 342 5.75E-5 T 25-04-2016 RJP_RS00865 3c16c7d2741be3b2c6dbee7e76931dbd 344 Gene3D G3DSA:3.40.50.300 45 218 1.4E-41 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RJP_RS00865 3c16c7d2741be3b2c6dbee7e76931dbd 344 SUPERFAMILY SSF52540 59 251 8.99E-41 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RJP_RS00865 3c16c7d2741be3b2c6dbee7e76931dbd 344 TIGRFAM TIGR00436 era: GTP-binding protein Era 59 327 3.5E-68 T 25-04-2016 IPR005662 GTP-binding protein Era GO:0003723|GO:0005525|GO:0005622 RJP_RS00865 3c16c7d2741be3b2c6dbee7e76931dbd 344 Pfam PF01926 50S ribosome-binding GTPase 60 174 6.1E-24 T 25-04-2016 IPR006073 GTP binding domain GO:0005525 RJP_RS00865 3c16c7d2741be3b2c6dbee7e76931dbd 344 Gene3D G3DSA:3.30.300.20 236 339 9.4E-35 T 25-04-2016 IPR015946 K homology domain-like, alpha/beta RJP_RS00865 3c16c7d2741be3b2c6dbee7e76931dbd 344 SUPERFAMILY SSF54814 229 341 1.5E-35 T 25-04-2016 IPR009019 K homology domain, prokaryotic type GO:0003723 RJP_RS00865 3c16c7d2741be3b2c6dbee7e76931dbd 344 Hamap MF_00367 GTPase Era [era]. 55 344 30.597 T 25-04-2016 IPR005662 GTP-binding protein Era GO:0003723|GO:0005525|GO:0005622 RJP_RS00865 3c16c7d2741be3b2c6dbee7e76931dbd 344 Pfam PF07650 KH domain 256 332 1.6E-16 T 25-04-2016 IPR004044 K Homology domain, type 2 GO:0003723 RJP_RS00865 3c16c7d2741be3b2c6dbee7e76931dbd 344 PANTHER PTHR11649 45 342 5.7E-99 T 25-04-2016 RJP_RS00865 3c16c7d2741be3b2c6dbee7e76931dbd 344 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 56 216 5.8E-27 T 25-04-2016 IPR005225 Small GTP-binding protein domain GO:0005525 RJP_RS00865 3c16c7d2741be3b2c6dbee7e76931dbd 344 TIGRFAM TIGR01045 RPE1: rickettsial palindromic element RPE1 domain 4 53 7.0E-23 T 25-04-2016 IPR005728 Rickettsial palindromic element RJP_RS00865 3c16c7d2741be3b2c6dbee7e76931dbd 344 PANTHER PTHR11649:SF3 45 342 5.7E-99 T 25-04-2016 RJP_RS06345 b713d850353c318f5644166381b346b7 790 Pfam PF00912 Transglycosylase 56 233 2.5E-59 T 25-04-2016 IPR001264 Glycosyl transferase, family 51 UniPathway: UPA00219 RJP_RS06345 b713d850353c318f5644166381b346b7 790 Gene3D G3DSA:3.40.710.10 237 319 1.7E-123 T 25-04-2016 IPR012338 Beta-lactamase/transpeptidase-like RJP_RS06345 b713d850353c318f5644166381b346b7 790 Gene3D G3DSA:3.40.710.10 414 757 1.7E-123 T 25-04-2016 IPR012338 Beta-lactamase/transpeptidase-like RJP_RS06345 b713d850353c318f5644166381b346b7 790 Pfam PF00905 Penicillin binding protein transpeptidase domain 419 713 2.3E-33 T 25-04-2016 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 RJP_RS06345 b713d850353c318f5644166381b346b7 790 SUPERFAMILY SSF56601 414 747 6.73E-118 T 25-04-2016 IPR012338 Beta-lactamase/transpeptidase-like RJP_RS06345 b713d850353c318f5644166381b346b7 790 SUPERFAMILY SSF56601 215 237 6.73E-118 T 25-04-2016 IPR012338 Beta-lactamase/transpeptidase-like RJP_RS06345 b713d850353c318f5644166381b346b7 790 SUPERFAMILY SSF56601 266 319 6.73E-118 T 25-04-2016 IPR012338 Beta-lactamase/transpeptidase-like RJP_RS06345 b713d850353c318f5644166381b346b7 790 PANTHER PTHR32282:SF5 11 316 2.1E-217 T 25-04-2016 RJP_RS06345 b713d850353c318f5644166381b346b7 790 PANTHER PTHR32282:SF5 413 602 2.1E-217 T 25-04-2016 RJP_RS06345 b713d850353c318f5644166381b346b7 790 PANTHER PTHR32282:SF5 625 749 2.1E-217 T 25-04-2016 RJP_RS06345 b713d850353c318f5644166381b346b7 790 Pfam PF17092 Penicillin-binding protein OB-like domain 323 417 5.9E-16 T 25-04-2016 IPR031376 Penicillin-binding protein, OB-like domain KEGG: 00230+2.4.2.-|KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00514+2.4.2.-|KEGG: 00550+3.4.-.-|KEGG: 00780+3.4.-.-|UniPathway: UPA00219 RJP_RS06345 b713d850353c318f5644166381b346b7 790 Gene3D G3DSA:1.10.3810.10 56 236 2.9E-68 T 25-04-2016 RJP_RS06345 b713d850353c318f5644166381b346b7 790 PANTHER PTHR32282 11 316 2.1E-217 T 25-04-2016 RJP_RS06345 b713d850353c318f5644166381b346b7 790 PANTHER PTHR32282 413 602 2.1E-217 T 25-04-2016 RJP_RS06345 b713d850353c318f5644166381b346b7 790 PANTHER PTHR32282 625 749 2.1E-217 T 25-04-2016 RJP_RS06345 b713d850353c318f5644166381b346b7 790 TIGRFAM TIGR02074 PBP_1a_fam: penicillin-binding protein, 1A family 66 718 4.9E-204 T 25-04-2016 RJP_RS06345 b713d850353c318f5644166381b346b7 790 Gene3D G3DSA:2.40.50.140 353 413 1.4E-6 T 25-04-2016 IPR012340 Nucleic acid-binding, OB-fold RJP_RS06345 b713d850353c318f5644166381b346b7 790 SUPERFAMILY SSF53955 43 257 3.09E-72 T 25-04-2016 IPR023346 Lysozyme-like domain RJP_RS04875 73b54a69cc9b37a45e476cb99d9383de 225 Hamap MF_00917 7-carboxy-7-deazaguanine synthase [queE]. 18 225 36.134 T 25-04-2016 IPR024924 7-carboxy-7-deazaguanine synthase-like KEGG: 00790+4.3.99.3|MetaCyc: PWY-6703|UniPathway: UPA00391 RJP_RS04875 73b54a69cc9b37a45e476cb99d9383de 225 Gene3D G3DSA:3.20.20.70 44 123 6.2E-12 T 25-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 RJP_RS04875 73b54a69cc9b37a45e476cb99d9383de 225 Pfam PF04055 Radical SAM superfamily 42 124 7.3E-10 T 25-04-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 RJP_RS04875 73b54a69cc9b37a45e476cb99d9383de 225 PIRSF PIRSF000370 16 225 3.8E-42 T 25-04-2016 IPR024924 7-carboxy-7-deazaguanine synthase-like KEGG: 00790+4.3.99.3|MetaCyc: PWY-6703|UniPathway: UPA00391 RJP_RS04875 73b54a69cc9b37a45e476cb99d9383de 225 SUPERFAMILY SSF102114 37 124 8.63E-12 T 25-04-2016 RJP_RS04875 73b54a69cc9b37a45e476cb99d9383de 225 PANTHER PTHR11228 17 190 5.9E-25 T 25-04-2016 RJP_RS04875 73b54a69cc9b37a45e476cb99d9383de 225 Pfam PF13394 4Fe-4S single cluster domain 39 124 2.9E-12 T 25-04-2016 RJP_RS04875 73b54a69cc9b37a45e476cb99d9383de 225 PANTHER PTHR11228:SF6 17 190 5.9E-25 T 25-04-2016 RJP_RS00560 e4c29b0443da32761b33a20354e30268 224 Gene3D G3DSA:3.30.70.1070 142 223 4.2E-4 T 25-04-2016 IPR007730 Sporulation-related domain GO:0042834 RJP_RS00560 e4c29b0443da32761b33a20354e30268 224 Pfam PF05036 Sporulation related domain 144 222 1.1E-11 T 25-04-2016 IPR007730 Sporulation-related domain GO:0042834 RJP_RS00560 e4c29b0443da32761b33a20354e30268 224 SUPERFAMILY SSF110997 143 220 2.75E-5 T 25-04-2016 IPR007730 Sporulation-related domain GO:0042834 RJP_RS05530 168c541846c311a3ba656df9caa00735 105 Pfam PF13781 DoxX-like family 2 96 5.2E-23 T 25-04-2016 IPR025695 DoxX-like family RJP_RS02710 855d1fee5aec0d8c6922f08d14506019 522 Pfam PF01921 tRNA synthetases class I (K) 13 366 2.0E-131 T 25-04-2016 RJP_RS02710 855d1fee5aec0d8c6922f08d14506019 522 Hamap MF_00177 Lysine--tRNA ligase [lysS]. 12 522 30.882 T 25-04-2016 IPR002904 Lysine-tRNA ligase GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6 RJP_RS02710 855d1fee5aec0d8c6922f08d14506019 522 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 44 53 - T 25-04-2016 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 RJP_RS02710 855d1fee5aec0d8c6922f08d14506019 522 PANTHER PTHR37940 3 522 1.6E-148 T 25-04-2016 RJP_RS02710 855d1fee5aec0d8c6922f08d14506019 522 SUPERFAMILY SSF52374 13 330 3.22E-66 T 25-04-2016 RJP_RS02710 855d1fee5aec0d8c6922f08d14506019 522 Gene3D G3DSA:1.10.730.10 278 376 1.6E-5 T 25-04-2016 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 RJP_RS02710 855d1fee5aec0d8c6922f08d14506019 522 TIGRFAM TIGR00467 lysS_arch: lysine--tRNA ligase 37 518 1.3E-63 T 25-04-2016 IPR002904 Lysine-tRNA ligase GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6 RJP_RS02710 855d1fee5aec0d8c6922f08d14506019 522 Gene3D G3DSA:3.40.50.620 14 194 8.0E-42 T 25-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold RJP_RS02710 855d1fee5aec0d8c6922f08d14506019 522 Gene3D G3DSA:3.40.50.620 231 277 8.0E-42 T 25-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold RJP_RS02710 855d1fee5aec0d8c6922f08d14506019 522 SUPERFAMILY SSF48163 329 519 1.44E-36 T 25-04-2016 IPR008925 Aminoacyl-tRNA synthetase, class I, anticodon-binding GO:0000049 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188 RJP_RS02710 855d1fee5aec0d8c6922f08d14506019 522 Gene3D G3DSA:1.10.10.350 428 519 2.4E-25 T 25-04-2016 IPR020751 Aminoacyl-tRNA synthetase, class I, anticodon-binding domain, subdomain 2 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188 RJP_RS01155 c0cb694c391b1dd811b78e7bbf11e1c0 1008 Gene3D G3DSA:1.10.3850.10 792 1007 2.8E-63 T 25-04-2016 RJP_RS01155 c0cb694c391b1dd811b78e7bbf11e1c0 1008 Gene3D G3DSA:1.10.3850.10 271 490 1.2E-54 T 25-04-2016 RJP_RS01155 c0cb694c391b1dd811b78e7bbf11e1c0 1008 SUPERFAMILY SSF82866 788 1007 1.96E-47 T 25-04-2016 RJP_RS01155 c0cb694c391b1dd811b78e7bbf11e1c0 1008 Gene3D G3DSA:3.30.70.1430 557 646 1.0E-13 T 25-04-2016 RJP_RS01155 c0cb694c391b1dd811b78e7bbf11e1c0 1008 SUPERFAMILY SSF82693 554 646 4.45E-17 T 25-04-2016 RJP_RS01155 c0cb694c391b1dd811b78e7bbf11e1c0 1008 SUPERFAMILY SSF82714 182 263 1.2E-14 T 25-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains RJP_RS01155 c0cb694c391b1dd811b78e7bbf11e1c0 1008 Pfam PF00873 AcrB/AcrD/AcrF family 4 1005 1.7E-275 T 25-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 RJP_RS01155 c0cb694c391b1dd811b78e7bbf11e1c0 1008 SUPERFAMILY SSF82866 290 487 2.35E-45 T 25-04-2016 RJP_RS01155 c0cb694c391b1dd811b78e7bbf11e1c0 1008 SUPERFAMILY SSF82693 136 181 3.01E-18 T 25-04-2016 RJP_RS01155 c0cb694c391b1dd811b78e7bbf11e1c0 1008 SUPERFAMILY SSF82693 267 321 3.01E-18 T 25-04-2016 RJP_RS01155 c0cb694c391b1dd811b78e7bbf11e1c0 1008 PRINTS PR00702 Acriflavin resistance protein family signature 604 618 2.2E-73 T 25-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 RJP_RS01155 c0cb694c391b1dd811b78e7bbf11e1c0 1008 PRINTS PR00702 Acriflavin resistance protein family signature 462 485 2.2E-73 T 25-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 RJP_RS01155 c0cb694c391b1dd811b78e7bbf11e1c0 1008 PRINTS PR00702 Acriflavin resistance protein family signature 10 34 2.2E-73 T 25-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 RJP_RS01155 c0cb694c391b1dd811b78e7bbf11e1c0 1008 PRINTS PR00702 Acriflavin resistance protein family signature 38 56 2.2E-73 T 25-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 RJP_RS01155 c0cb694c391b1dd811b78e7bbf11e1c0 1008 PRINTS PR00702 Acriflavin resistance protein family signature 437 460 2.2E-73 T 25-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 RJP_RS01155 c0cb694c391b1dd811b78e7bbf11e1c0 1008 PRINTS PR00702 Acriflavin resistance protein family signature 541 558 2.2E-73 T 25-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 RJP_RS01155 c0cb694c391b1dd811b78e7bbf11e1c0 1008 PRINTS PR00702 Acriflavin resistance protein family signature 329 352 2.2E-73 T 25-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 RJP_RS01155 c0cb694c391b1dd811b78e7bbf11e1c0 1008 PRINTS PR00702 Acriflavin resistance protein family signature 384 408 2.2E-73 T 25-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 RJP_RS01155 c0cb694c391b1dd811b78e7bbf11e1c0 1008 PRINTS PR00702 Acriflavin resistance protein family signature 356 377 2.2E-73 T 25-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 RJP_RS01155 c0cb694c391b1dd811b78e7bbf11e1c0 1008 SUPERFAMILY SSF82714 700 784 2.49E-16 T 25-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains RJP_RS01155 c0cb694c391b1dd811b78e7bbf11e1c0 1008 SUPERFAMILY SSF82693 40 134 1.18E-22 T 25-04-2016 RJP_RS01155 c0cb694c391b1dd811b78e7bbf11e1c0 1008 Gene3D G3DSA:3.30.70.1430 40 140 1.3E-26 T 25-04-2016 RJP_RS01155 c0cb694c391b1dd811b78e7bbf11e1c0 1008 PANTHER PTHR32063 1 1005 0.0 T 25-04-2016 RJP_RS01155 c0cb694c391b1dd811b78e7bbf11e1c0 1008 Gene3D G3DSA:3.30.2090.10 182 265 1.9E-17 T 25-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains RJP_RS01155 c0cb694c391b1dd811b78e7bbf11e1c0 1008 Gene3D G3DSA:3.30.2090.10 700 784 7.3E-15 T 25-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains RJP_RS02960 7f87c0b189f573f6d02a00e425531d37 315 SUPERFAMILY SSF49503 165 302 3.6E-58 T 25-04-2016 IPR008972 Cupredoxin RJP_RS02960 7f87c0b189f573f6d02a00e425531d37 315 PANTHER PTHR22888 31 299 4.5E-116 T 25-04-2016 RJP_RS02960 7f87c0b189f573f6d02a00e425531d37 315 Pfam PF02790 Cytochrome C oxidase subunit II, transmembrane domain 71 157 1.2E-27 T 25-04-2016 IPR011759 Cytochrome C oxidase subunit II, transmembrane domain GO:0016021|GO:0022900 RJP_RS02960 7f87c0b189f573f6d02a00e425531d37 315 ProSitePatterns PS00078 CO II and nitrous oxide reductase dinuclear copper centers signature. 233 281 - T 25-04-2016 IPR001505 Copper centre Cu(A) GO:0005507 RJP_RS02960 7f87c0b189f573f6d02a00e425531d37 315 PRINTS PR01166 Cytochrome c oxidase subunit II signature 270 287 2.3E-52 T 25-04-2016 RJP_RS02960 7f87c0b189f573f6d02a00e425531d37 315 PRINTS PR01166 Cytochrome c oxidase subunit II signature 208 229 2.3E-52 T 25-04-2016 RJP_RS02960 7f87c0b189f573f6d02a00e425531d37 315 PRINTS PR01166 Cytochrome c oxidase subunit II signature 143 163 2.3E-52 T 25-04-2016 RJP_RS02960 7f87c0b189f573f6d02a00e425531d37 315 PRINTS PR01166 Cytochrome c oxidase subunit II signature 131 143 2.3E-52 T 25-04-2016 RJP_RS02960 7f87c0b189f573f6d02a00e425531d37 315 PRINTS PR01166 Cytochrome c oxidase subunit II signature 165 184 2.3E-52 T 25-04-2016 RJP_RS02960 7f87c0b189f573f6d02a00e425531d37 315 PRINTS PR01166 Cytochrome c oxidase subunit II signature 232 252 2.3E-52 T 25-04-2016 RJP_RS02960 7f87c0b189f573f6d02a00e425531d37 315 PRINTS PR01166 Cytochrome c oxidase subunit II signature 252 269 2.3E-52 T 25-04-2016 RJP_RS02960 7f87c0b189f573f6d02a00e425531d37 315 Gene3D G3DSA:2.60.40.420 167 299 1.3E-57 T 25-04-2016 IPR008972 Cupredoxin RJP_RS02960 7f87c0b189f573f6d02a00e425531d37 315 TIGRFAM TIGR02866 CoxB: cytochrome c oxidase, subunit II 81 297 5.0E-63 T 25-04-2016 IPR014222 Cytochrome c oxidase, subunit II GO:0016021|GO:0016491 RJP_RS02960 7f87c0b189f573f6d02a00e425531d37 315 TIGRFAM TIGR01045 RPE1: rickettsial palindromic element RPE1 domain 6 53 3.8E-25 T 25-04-2016 IPR005728 Rickettsial palindromic element RJP_RS02960 7f87c0b189f573f6d02a00e425531d37 315 Pfam PF00116 Cytochrome C oxidase subunit II, periplasmic domain 169 288 1.4E-53 T 25-04-2016 IPR002429 Cytochrome c oxidase subunit II C-terminal GO:0004129|GO:0005507|GO:0016020 RJP_RS02960 7f87c0b189f573f6d02a00e425531d37 315 Gene3D G3DSA:1.10.287.90 73 164 3.7E-32 T 25-04-2016 IPR011759 Cytochrome C oxidase subunit II, transmembrane domain GO:0016021|GO:0022900 RJP_RS02960 7f87c0b189f573f6d02a00e425531d37 315 SUPERFAMILY SSF81464 69 162 2.62E-31 T 25-04-2016 IPR011759 Cytochrome C oxidase subunit II, transmembrane domain GO:0016021|GO:0022900 RJP_RS04160 1f3ad8eea4f40a89890692a1f6b09ed0 191 PANTHER PTHR30108 1 191 1.6E-81 T 25-04-2016 RJP_RS04160 1f3ad8eea4f40a89890692a1f6b09ed0 191 Gene3D G3DSA:3.40.50.1950 6 188 1.8E-76 T 25-04-2016 IPR003382 Flavoprotein GO:0003824 RJP_RS04160 1f3ad8eea4f40a89890692a1f6b09ed0 191 Hamap MF_01984 Flavin prenyltransferase UbiX [ubiX]. 5 188 36.373 T 25-04-2016 IPR004507 Flavin prenyltransferase UbiX/Pad1 RJP_RS04160 1f3ad8eea4f40a89890692a1f6b09ed0 191 PANTHER PTHR30108:SF2 1 191 1.6E-81 T 25-04-2016 RJP_RS04160 1f3ad8eea4f40a89890692a1f6b09ed0 191 TIGRFAM TIGR00421 ubiX_pad: polyprenyl P-hydroxybenzoate and phenylacrylic acid decarboxylases 6 186 3.2E-76 T 25-04-2016 IPR004507 Flavin prenyltransferase UbiX/Pad1 RJP_RS04160 1f3ad8eea4f40a89890692a1f6b09ed0 191 SUPERFAMILY SSF52507 6 188 4.71E-60 T 25-04-2016 IPR003382 Flavoprotein GO:0003824 RJP_RS04160 1f3ad8eea4f40a89890692a1f6b09ed0 191 Pfam PF02441 Flavoprotein 6 129 2.9E-28 T 25-04-2016 IPR003382 Flavoprotein GO:0003824 RJP_RS01430 785a1e58fdf02e1a50ef97844d1a41e1 588 SUPERFAMILY SSF52540 339 582 7.07E-92 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RJP_RS01430 785a1e58fdf02e1a50ef97844d1a41e1 588 Gene3D G3DSA:3.40.50.300 347 576 4.6E-82 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RJP_RS01430 785a1e58fdf02e1a50ef97844d1a41e1 588 PANTHER PTHR24221 2 586 0.0 T 25-04-2016 RJP_RS01430 785a1e58fdf02e1a50ef97844d1a41e1 588 ProSitePatterns PS00211 ABC transporters family signature. 484 498 - T 25-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 RJP_RS01430 785a1e58fdf02e1a50ef97844d1a41e1 588 Gene3D G3DSA:1.20.1560.10 14 330 1.2E-61 T 25-04-2016 RJP_RS01430 785a1e58fdf02e1a50ef97844d1a41e1 588 PANTHER PTHR24221:SF18 2 586 0.0 T 25-04-2016 RJP_RS01430 785a1e58fdf02e1a50ef97844d1a41e1 588 SMART SM00382 372 564 1.9E-13 T 25-04-2016 IPR003593 AAA+ ATPase domain RJP_RS01430 785a1e58fdf02e1a50ef97844d1a41e1 588 Pfam PF00005 ABC transporter 363 512 2.5E-34 T 25-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 RJP_RS01430 785a1e58fdf02e1a50ef97844d1a41e1 588 SUPERFAMILY SSF90123 10 330 9.29E-60 T 25-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 RJP_RS01430 785a1e58fdf02e1a50ef97844d1a41e1 588 Pfam PF00664 ABC transporter transmembrane region 31 300 1.5E-38 T 25-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 RJP_RS05585 c86b13bc4b14777f594baa85fd47dbaf 221 Gene3D G3DSA:3.40.50.300 2 216 8.5E-61 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RJP_RS05585 c86b13bc4b14777f594baa85fd47dbaf 221 PANTHER PTHR24220:SF111 7 219 2.1E-90 T 25-04-2016 RJP_RS05585 c86b13bc4b14777f594baa85fd47dbaf 221 SUPERFAMILY SSF52540 6 218 5.45E-64 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RJP_RS05585 c86b13bc4b14777f594baa85fd47dbaf 221 ProSitePatterns PS00211 ABC transporters family signature. 141 155 - T 25-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 RJP_RS05585 c86b13bc4b14777f594baa85fd47dbaf 221 PANTHER PTHR24220 7 219 2.1E-90 T 25-04-2016 RJP_RS05585 c86b13bc4b14777f594baa85fd47dbaf 221 SMART SM00382 34 219 1.2E-9 T 25-04-2016 IPR003593 AAA+ ATPase domain RJP_RS05585 c86b13bc4b14777f594baa85fd47dbaf 221 Pfam PF00005 ABC transporter 25 168 7.3E-31 T 25-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 RJP_RS04980 d704d8c6171f3738bf5746d6b0cb33e4 449 Gene3D G3DSA:3.90.190.20 314 447 5.4E-36 T 25-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 RJP_RS04980 d704d8c6171f3738bf5746d6b0cb33e4 449 Gene3D G3DSA:3.40.1390.10 8 70 1.1E-16 T 25-04-2016 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 UniPathway: UPA00219 RJP_RS04980 d704d8c6171f3738bf5746d6b0cb33e4 449 Hamap MF_02019 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [murF]. 12 449 30.986 T 25-04-2016 IPR005863 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase GO:0005524|GO:0005737|GO:0047480|GO:0071555 KEGG: 00300+6.3.2.10|KEGG: 00550+6.3.2.10|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 RJP_RS04980 d704d8c6171f3738bf5746d6b0cb33e4 449 SUPERFAMILY SSF63418 5 95 1.16E-18 T 25-04-2016 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 UniPathway: UPA00219 RJP_RS04980 d704d8c6171f3738bf5746d6b0cb33e4 449 TIGRFAM TIGR01143 murF: UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase 27 448 4.2E-136 T 25-04-2016 IPR005863 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase GO:0005524|GO:0005737|GO:0047480|GO:0071555 KEGG: 00300+6.3.2.10|KEGG: 00550+6.3.2.10|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 RJP_RS04980 d704d8c6171f3738bf5746d6b0cb33e4 449 PANTHER PTHR23135 9 447 1.4E-116 T 25-04-2016 RJP_RS04980 d704d8c6171f3738bf5746d6b0cb33e4 449 PANTHER PTHR23135:SF3 9 447 1.4E-116 T 25-04-2016 IPR005863 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase GO:0005524|GO:0005737|GO:0047480|GO:0071555 KEGG: 00300+6.3.2.10|KEGG: 00550+6.3.2.10|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 RJP_RS04980 d704d8c6171f3738bf5746d6b0cb33e4 449 SUPERFAMILY SSF53244 315 447 1.31E-31 T 25-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 RJP_RS04980 d704d8c6171f3738bf5746d6b0cb33e4 449 Pfam PF01225 Mur ligase family, catalytic domain 25 93 6.7E-7 T 25-04-2016 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 UniPathway: UPA00219 RJP_RS04980 d704d8c6171f3738bf5746d6b0cb33e4 449 Pfam PF02875 Mur ligase family, glutamate ligase domain 315 394 8.1E-12 T 25-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 RJP_RS04980 d704d8c6171f3738bf5746d6b0cb33e4 449 SUPERFAMILY SSF53623 99 312 3.4E-43 T 25-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 RJP_RS04980 d704d8c6171f3738bf5746d6b0cb33e4 449 Pfam PF08245 Mur ligase middle domain 104 292 1.4E-44 T 25-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 RJP_RS04980 d704d8c6171f3738bf5746d6b0cb33e4 449 Gene3D G3DSA:3.40.1190.10 81 311 1.2E-63 T 25-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 RJP_RS02225 8d1ccbb26e32645b404d39716a9e18f6 414 TIGRFAM TIGR00442 hisS: histidine--tRNA ligase 6 403 1.9E-133 T 25-04-2016 IPR015807 Histidine-tRNA ligase GO:0004821|GO:0005524|GO:0006427 KEGG: 00970+6.1.1.21|Reactome: REACT_71 RJP_RS02225 8d1ccbb26e32645b404d39716a9e18f6 414 Gene3D G3DSA:3.30.930.10 221 316 2.3E-82 T 25-04-2016 RJP_RS02225 8d1ccbb26e32645b404d39716a9e18f6 414 Gene3D G3DSA:3.30.930.10 4 185 2.3E-82 T 25-04-2016 RJP_RS02225 8d1ccbb26e32645b404d39716a9e18f6 414 PANTHER PTHR11476 1 414 4.5E-156 T 25-04-2016 IPR004516 Histidine-tRNA ligase/ATP phosphoribosyltransferase regulatory subunit GO:0005737 Reactome: REACT_71 RJP_RS02225 8d1ccbb26e32645b404d39716a9e18f6 414 PIRSF PIRSF001549 1 414 4.3E-119 T 25-04-2016 IPR004516 Histidine-tRNA ligase/ATP phosphoribosyltransferase regulatory subunit GO:0005737 Reactome: REACT_71 RJP_RS02225 8d1ccbb26e32645b404d39716a9e18f6 414 PANTHER PTHR11476:SF9 1 414 4.5E-156 T 25-04-2016 RJP_RS02225 8d1ccbb26e32645b404d39716a9e18f6 414 Gene3D G3DSA:3.40.50.800 326 413 1.6E-13 T 25-04-2016 IPR004154 Anticodon-binding RJP_RS02225 8d1ccbb26e32645b404d39716a9e18f6 414 SUPERFAMILY SSF55681 5 317 3.25E-88 T 25-04-2016 RJP_RS02225 8d1ccbb26e32645b404d39716a9e18f6 414 SUPERFAMILY SSF52954 326 414 3.93E-15 T 25-04-2016 IPR004154 Anticodon-binding RJP_RS02225 8d1ccbb26e32645b404d39716a9e18f6 414 Pfam PF13393 Histidyl-tRNA synthetase 10 313 3.4E-40 T 25-04-2016 RJP_RS02225 8d1ccbb26e32645b404d39716a9e18f6 414 Pfam PF03129 Anticodon binding domain 327 414 4.3E-9 T 25-04-2016 IPR004154 Anticodon-binding RJP_RS02225 8d1ccbb26e32645b404d39716a9e18f6 414 Hamap MF_00127 Histidine--tRNA ligase [hisS]. 3 414 30.267 T 25-04-2016 IPR015807 Histidine-tRNA ligase GO:0004821|GO:0005524|GO:0006427 KEGG: 00970+6.1.1.21|Reactome: REACT_71 RJP_RS00555 828022f8466bb6df874965275432de2b 576 PRINTS PR01038 Arginyl-tRNA synthetase signature 118 133 1.2E-22 T 25-04-2016 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: REACT_71 RJP_RS00555 828022f8466bb6df874965275432de2b 576 PRINTS PR01038 Arginyl-tRNA synthetase signature 133 149 1.2E-22 T 25-04-2016 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: REACT_71 RJP_RS00555 828022f8466bb6df874965275432de2b 576 PRINTS PR01038 Arginyl-tRNA synthetase signature 315 336 1.2E-22 T 25-04-2016 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: REACT_71 RJP_RS00555 828022f8466bb6df874965275432de2b 576 PRINTS PR01038 Arginyl-tRNA synthetase signature 157 170 1.2E-22 T 25-04-2016 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: REACT_71 RJP_RS00555 828022f8466bb6df874965275432de2b 576 SUPERFAMILY SSF47323 440 576 1.57E-32 T 25-04-2016 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 RJP_RS00555 828022f8466bb6df874965275432de2b 576 PANTHER PTHR11956:SF6 313 576 1.6E-161 T 25-04-2016 RJP_RS00555 828022f8466bb6df874965275432de2b 576 PANTHER PTHR11956:SF6 1 297 1.6E-161 T 25-04-2016 RJP_RS00555 828022f8466bb6df874965275432de2b 576 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 128 137 - T 25-04-2016 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 RJP_RS00555 828022f8466bb6df874965275432de2b 576 PANTHER PTHR11956 313 576 1.6E-161 T 25-04-2016 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: REACT_71 RJP_RS00555 828022f8466bb6df874965275432de2b 576 PANTHER PTHR11956 1 297 1.6E-161 T 25-04-2016 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: REACT_71 RJP_RS00555 828022f8466bb6df874965275432de2b 576 Gene3D G3DSA:3.30.1360.70 1 107 2.8E-24 T 25-04-2016 IPR005148 Arginyl tRNA synthetase N-terminal domain GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: REACT_71 RJP_RS00555 828022f8466bb6df874965275432de2b 576 Pfam PF00750 tRNA synthetases class I (R) 98 376 7.2E-16 T 25-04-2016 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: REACT_71 RJP_RS00555 828022f8466bb6df874965275432de2b 576 SUPERFAMILY SSF55190 8 102 2.88E-17 T 25-04-2016 IPR005148 Arginyl tRNA synthetase N-terminal domain GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: REACT_71 RJP_RS00555 828022f8466bb6df874965275432de2b 576 Gene3D G3DSA:3.40.50.620 112 451 2.2E-84 T 25-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold RJP_RS00555 828022f8466bb6df874965275432de2b 576 Pfam PF03485 Arginyl tRNA synthetase N terminal domain 6 89 2.3E-16 T 25-04-2016 IPR005148 Arginyl tRNA synthetase N-terminal domain GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: REACT_71 RJP_RS00555 828022f8466bb6df874965275432de2b 576 SMART SM01016 5 89 3.2E-21 T 25-04-2016 IPR005148 Arginyl tRNA synthetase N-terminal domain GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: REACT_71 RJP_RS00555 828022f8466bb6df874965275432de2b 576 Gene3D G3DSA:1.10.730.10 452 576 3.6E-34 T 25-04-2016 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 RJP_RS00555 828022f8466bb6df874965275432de2b 576 TIGRFAM TIGR00456 argS: arginine--tRNA ligase 5 576 5.5E-102 T 25-04-2016 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: REACT_71 RJP_RS00555 828022f8466bb6df874965275432de2b 576 Hamap MF_00123 Arginine--tRNA ligase [argS]. 5 576 24.588 T 25-04-2016 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: REACT_71 RJP_RS00555 828022f8466bb6df874965275432de2b 576 SUPERFAMILY SSF52374 112 456 5.35E-77 T 25-04-2016 RJP_RS00555 828022f8466bb6df874965275432de2b 576 Pfam PF05746 DALR anticodon binding domain 446 576 1.8E-30 T 25-04-2016 IPR008909 DALR anticodon binding GO:0004814|GO:0005524|GO:0006420 RJP_RS00555 828022f8466bb6df874965275432de2b 576 SMART SM00836 446 576 2.3E-50 T 25-04-2016 IPR008909 DALR anticodon binding GO:0004814|GO:0005524|GO:0006420 RJP_RS02935 b0881c10795f8fcaf981531915e844cf 838 Pfam PF12705 PD-(D/E)XK nuclease superfamily 558 743 7.3E-22 T 25-04-2016 RJP_RS02935 b0881c10795f8fcaf981531915e844cf 838 TIGRFAM TIGR03777 RPE4: rickettsial palindromic element RPE4 domain 523 545 2.1E-9 T 25-04-2016 IPR022439 Rickettsia palindromic element RPE4 RJP_RS02935 b0881c10795f8fcaf981531915e844cf 838 SUPERFAMILY SSF52980 560 721 9.12E-6 T 25-04-2016 IPR011335 Restriction endonuclease type II-like RJP_RS02935 b0881c10795f8fcaf981531915e844cf 838 SUPERFAMILY SSF52540 212 519 5.13E-11 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RJP_RS06090 c1f26bb01b01b58b752f89bd6e4cdaaf 78 Pfam PF01381 Helix-turn-helix 11 69 3.3E-16 T 25-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 RJP_RS06090 c1f26bb01b01b58b752f89bd6e4cdaaf 78 SUPERFAMILY SSF47413 5 71 4.79E-10 T 25-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 RJP_RS06090 c1f26bb01b01b58b752f89bd6e4cdaaf 78 SMART SM00530 10 69 1.1E-8 T 25-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 RJP_RS06090 c1f26bb01b01b58b752f89bd6e4cdaaf 78 Gene3D G3DSA:1.10.260.40 5 73 1.6E-12 T 25-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 RJP_RS04385 c38cef672085b9fc94b1d51c25761741 593 Pfam PF00905 Penicillin binding protein transpeptidase domain 262 585 1.6E-73 T 25-04-2016 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 RJP_RS04385 c38cef672085b9fc94b1d51c25761741 593 TIGRFAM TIGR03423 pbp2_mrdA: penicillin-binding protein 2 14 590 2.4E-191 T 25-04-2016 IPR017790 Penicillin-binding protein 2 GO:0016020 UniPathway: UPA00219 RJP_RS04385 c38cef672085b9fc94b1d51c25761741 593 Gene3D G3DSA:3.40.710.10 244 591 2.2E-101 T 25-04-2016 IPR012338 Beta-lactamase/transpeptidase-like RJP_RS04385 c38cef672085b9fc94b1d51c25761741 593 Pfam PF03717 Penicillin-binding Protein dimerisation domain 59 229 1.7E-38 T 25-04-2016 IPR005311 Penicillin-binding protein, dimerisation domain GO:0008658 RJP_RS04385 c38cef672085b9fc94b1d51c25761741 593 Gene3D G3DSA:3.90.1310.10 125 242 4.6E-30 T 25-04-2016 RJP_RS04385 c38cef672085b9fc94b1d51c25761741 593 PANTHER PTHR30627:SF2 1 585 6.0E-171 T 25-04-2016 RJP_RS04385 c38cef672085b9fc94b1d51c25761741 593 PANTHER PTHR30627 1 585 6.0E-171 T 25-04-2016 RJP_RS04385 c38cef672085b9fc94b1d51c25761741 593 SUPERFAMILY SSF56601 244 590 3.87E-89 T 25-04-2016 IPR012338 Beta-lactamase/transpeptidase-like RJP_RS04385 c38cef672085b9fc94b1d51c25761741 593 SUPERFAMILY SSF56519 51 242 1.83E-44 T 25-04-2016 IPR005311 Penicillin-binding protein, dimerisation domain GO:0008658 RJP_RS01575 dfe05eceb6e380327b8ded1ef5ae4276 412 Gene3D G3DSA:3.30.830.10 4 213 1.4E-54 T 25-04-2016 IPR011237 Peptidase M16 domain GO:0046872 RJP_RS01575 dfe05eceb6e380327b8ded1ef5ae4276 412 Pfam PF00675 Insulinase (Peptidase family M16) 16 162 3.9E-41 T 25-04-2016 IPR011765 Peptidase M16, N-terminal RJP_RS01575 dfe05eceb6e380327b8ded1ef5ae4276 412 SUPERFAMILY SSF63411 223 407 8.13E-40 T 25-04-2016 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 RJP_RS01575 dfe05eceb6e380327b8ded1ef5ae4276 412 SUPERFAMILY SSF63411 6 208 8.33E-56 T 25-04-2016 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 RJP_RS01575 dfe05eceb6e380327b8ded1ef5ae4276 412 Gene3D G3DSA:3.30.830.10 222 407 4.5E-48 T 25-04-2016 IPR011237 Peptidase M16 domain GO:0046872 RJP_RS01575 dfe05eceb6e380327b8ded1ef5ae4276 412 Pfam PF05193 Peptidase M16 inactive domain 169 341 1.4E-38 T 25-04-2016 IPR007863 Peptidase M16, C-terminal RJP_RS01575 dfe05eceb6e380327b8ded1ef5ae4276 412 PANTHER PTHR11851 7 406 3.8E-121 T 25-04-2016 RJP_RS01575 dfe05eceb6e380327b8ded1ef5ae4276 412 ProSitePatterns PS00143 Insulinase family, zinc-binding region signature. 36 59 - T 25-04-2016 IPR001431 Peptidase M16, zinc-binding site GO:0004222|GO:0006508 RJP_RS03255 8bb991d18b5f529349ad76fcf7723917 290 Gene3D G3DSA:3.40.50.1820 21 288 2.2E-54 T 25-04-2016 IPR029058 Alpha/Beta hydrolase fold RJP_RS03255 8bb991d18b5f529349ad76fcf7723917 290 SUPERFAMILY SSF53474 22 280 3.03E-40 T 25-04-2016 IPR029058 Alpha/Beta hydrolase fold RJP_RS03255 8bb991d18b5f529349ad76fcf7723917 290 PANTHER PTHR10992 20 288 9.8E-33 T 25-04-2016 RJP_RS03255 8bb991d18b5f529349ad76fcf7723917 290 Pfam PF00561 alpha/beta hydrolase fold 37 137 5.5E-16 T 25-04-2016 IPR000073 Alpha/beta hydrolase fold-1 RJP_RS03160 0298701d9ef1c1dbc35ddc9d26d8a6d2 386 TIGRFAM TIGR01016 sucCoAbeta: succinate-CoA ligase, beta subunit 1 385 3.4E-181 T 25-04-2016 IPR005809 Succinyl-CoA synthetase, beta subunit GO:0003824|GO:0008152 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: REACT_1046|UniPathway: UPA00223 RJP_RS03160 0298701d9ef1c1dbc35ddc9d26d8a6d2 386 SUPERFAMILY SSF52210 239 384 2.75E-54 T 25-04-2016 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|UniPathway: UPA00223 RJP_RS03160 0298701d9ef1c1dbc35ddc9d26d8a6d2 386 Pfam PF00549 CoA-ligase 262 381 5.7E-26 T 25-04-2016 IPR005811 ATP-citrate lyase/succinyl-CoA ligase GO:0003824|GO:0008152 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|UniPathway: UPA00223 RJP_RS03160 0298701d9ef1c1dbc35ddc9d26d8a6d2 386 Gene3D G3DSA:3.30.1490.20 22 95 1.2E-32 T 25-04-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 RJP_RS03160 0298701d9ef1c1dbc35ddc9d26d8a6d2 386 Gene3D G3DSA:3.40.50.261 240 383 3.1E-65 T 25-04-2016 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|UniPathway: UPA00223 RJP_RS03160 0298701d9ef1c1dbc35ddc9d26d8a6d2 386 Pfam PF08442 ATP-grasp domain 2 202 8.6E-85 T 25-04-2016 IPR013650 ATP-grasp fold, succinyl-CoA synthetase-type KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|UniPathway: UPA00223 RJP_RS03160 0298701d9ef1c1dbc35ddc9d26d8a6d2 386 Hamap MF_00558 Succinyl-CoA ligase [ADP-forming] subunit beta [sucC]. 1 386 42.842 T 25-04-2016 IPR005809 Succinyl-CoA synthetase, beta subunit GO:0003824|GO:0008152 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: REACT_1046|UniPathway: UPA00223 RJP_RS03160 0298701d9ef1c1dbc35ddc9d26d8a6d2 386 ProSitePatterns PS01217 ATP-citrate lyase / succinyl-CoA ligases family signature 3. 257 281 - T 25-04-2016 IPR017866 Succinyl-CoA synthetase, beta subunit, conserved site KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|UniPathway: UPA00223 RJP_RS03160 0298701d9ef1c1dbc35ddc9d26d8a6d2 386 Gene3D G3DSA:3.30.470.20 96 239 8.6E-60 T 25-04-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 RJP_RS03160 0298701d9ef1c1dbc35ddc9d26d8a6d2 386 PANTHER PTHR11815:SF1 1 386 4.7E-223 T 25-04-2016 RJP_RS03160 0298701d9ef1c1dbc35ddc9d26d8a6d2 386 PANTHER PTHR11815 1 386 4.7E-223 T 25-04-2016 IPR005809 Succinyl-CoA synthetase, beta subunit GO:0003824|GO:0008152 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: REACT_1046|UniPathway: UPA00223 RJP_RS03160 0298701d9ef1c1dbc35ddc9d26d8a6d2 386 SUPERFAMILY SSF56059 1 238 6.28E-80 T 25-04-2016 RJP_RS03160 0298701d9ef1c1dbc35ddc9d26d8a6d2 386 PIRSF PIRSF001554 1 386 1.8E-152 T 25-04-2016 IPR005809 Succinyl-CoA synthetase, beta subunit GO:0003824|GO:0008152 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: REACT_1046|UniPathway: UPA00223 RJP_RS00035 2ce8f01c7fb85411ce7f79d85a4821bd 1010 Gene3D G3DSA:2.40.30.10 768 860 1.1E-12 T 25-04-2016 RJP_RS00035 2ce8f01c7fb85411ce7f79d85a4821bd 1010 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 527 545 9.3E-5 T 25-04-2016 RJP_RS00035 2ce8f01c7fb85411ce7f79d85a4821bd 1010 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 361 380 9.3E-5 T 25-04-2016 RJP_RS00035 2ce8f01c7fb85411ce7f79d85a4821bd 1010 Gene3D G3DSA:3.50.50.60 478 700 5.5E-15 T 25-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RJP_RS00035 2ce8f01c7fb85411ce7f79d85a4821bd 1010 SUPERFAMILY SSF51971 601 656 3.77E-20 T 25-04-2016 RJP_RS00035 2ce8f01c7fb85411ce7f79d85a4821bd 1010 SUPERFAMILY SSF51971 687 700 3.77E-20 T 25-04-2016 RJP_RS00035 2ce8f01c7fb85411ce7f79d85a4821bd 1010 SUPERFAMILY SSF51971 357 390 3.77E-20 T 25-04-2016 RJP_RS00035 2ce8f01c7fb85411ce7f79d85a4821bd 1010 SUPERFAMILY SSF51971 419 548 3.77E-20 T 25-04-2016 RJP_RS00035 2ce8f01c7fb85411ce7f79d85a4821bd 1010 Gene3D G3DSA:3.40.50.720 357 395 5.0E-5 T 25-04-2016 IPR016040 NAD(P)-binding domain RJP_RS00035 2ce8f01c7fb85411ce7f79d85a4821bd 1010 Gene3D G3DSA:3.40.50.720 451 477 5.0E-5 T 25-04-2016 IPR016040 NAD(P)-binding domain RJP_RS00035 2ce8f01c7fb85411ce7f79d85a4821bd 1010 Gene3D G3DSA:1.10.1060.10 209 328 7.9E-7 T 25-04-2016 RJP_RS00035 2ce8f01c7fb85411ce7f79d85a4821bd 1010 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 523 547 8.6E-5 T 25-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 RJP_RS00035 2ce8f01c7fb85411ce7f79d85a4821bd 1010 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 360 382 8.6E-5 T 25-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 RJP_RS00035 2ce8f01c7fb85411ce7f79d85a4821bd 1010 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 359 552 4.9E-7 T 25-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RJP_RS00035 2ce8f01c7fb85411ce7f79d85a4821bd 1010 SUPERFAMILY SSF63380 767 861 8.97E-12 T 25-04-2016 IPR017938 Riboflavin synthase-like beta-barrel GO:0016491|GO:0055114 RJP_RS01970 6b2c986faf53e5b84e03978a9a4329e2 600 Pfam PF00679 Elongation factor G C-terminus 402 485 2.6E-20 T 25-04-2016 IPR000640 Translation elongation factor EFG, V domain RJP_RS01970 6b2c986faf53e5b84e03978a9a4329e2 600 SUPERFAMILY SSF52540 1 232 5.32E-53 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RJP_RS01970 6b2c986faf53e5b84e03978a9a4329e2 600 TIGRFAM TIGR01393 lepA: elongation factor 4 6 597 2.5E-287 T 25-04-2016 IPR006297 Elongation factor 4 GO:0005525 RJP_RS01970 6b2c986faf53e5b84e03978a9a4329e2 600 Gene3D G3DSA:3.30.70.240 404 491 3.4E-19 T 25-04-2016 IPR000640 Translation elongation factor EFG, V domain RJP_RS01970 6b2c986faf53e5b84e03978a9a4329e2 600 SUPERFAMILY SSF54980 296 373 3.38E-17 T 25-04-2016 IPR009022 Elongation factor G, III-V domain RJP_RS01970 6b2c986faf53e5b84e03978a9a4329e2 600 Pfam PF03144 Elongation factor Tu domain 2 208 278 1.8E-7 T 25-04-2016 IPR004161 Translation elongation factor EFTu/EF1A, domain 2 GO:0005525 RJP_RS01970 6b2c986faf53e5b84e03978a9a4329e2 600 Pfam PF00009 Elongation factor Tu GTP binding domain 6 184 7.0E-50 T 25-04-2016 RJP_RS01970 6b2c986faf53e5b84e03978a9a4329e2 600 SUPERFAMILY SSF54980 403 496 2.16E-22 T 25-04-2016 IPR009022 Elongation factor G, III-V domain RJP_RS01970 6b2c986faf53e5b84e03978a9a4329e2 600 SMART SM00838 401 487 0.0067 T 25-04-2016 IPR000640 Translation elongation factor EFG, V domain RJP_RS01970 6b2c986faf53e5b84e03978a9a4329e2 600 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 8 175 5.6E-17 T 25-04-2016 IPR005225 Small GTP-binding protein domain GO:0005525 RJP_RS01970 6b2c986faf53e5b84e03978a9a4329e2 600 PANTHER PTHR23115 400 598 0.0 T 25-04-2016 RJP_RS01970 6b2c986faf53e5b84e03978a9a4329e2 600 PANTHER PTHR23115 1 376 0.0 T 25-04-2016 RJP_RS01970 6b2c986faf53e5b84e03978a9a4329e2 600 Gene3D G3DSA:2.40.30.10 199 292 6.2E-21 T 25-04-2016 RJP_RS01970 6b2c986faf53e5b84e03978a9a4329e2 600 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 45 60 - T 25-04-2016 IPR031157 Tr-type G domain, conserved site RJP_RS01970 6b2c986faf53e5b84e03978a9a4329e2 600 PRINTS PR00315 GTP-binding elongation factor signature 77 87 7.6E-14 T 25-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 RJP_RS01970 6b2c986faf53e5b84e03978a9a4329e2 600 PRINTS PR00315 GTP-binding elongation factor signature 93 104 7.6E-14 T 25-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 RJP_RS01970 6b2c986faf53e5b84e03978a9a4329e2 600 PRINTS PR00315 GTP-binding elongation factor signature 9 22 7.6E-14 T 25-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 RJP_RS01970 6b2c986faf53e5b84e03978a9a4329e2 600 PRINTS PR00315 GTP-binding elongation factor signature 52 60 7.6E-14 T 25-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 RJP_RS01970 6b2c986faf53e5b84e03978a9a4329e2 600 PRINTS PR00315 GTP-binding elongation factor signature 129 138 7.6E-14 T 25-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 RJP_RS01970 6b2c986faf53e5b84e03978a9a4329e2 600 Gene3D G3DSA:3.30.70.870 296 372 1.3E-24 T 25-04-2016 RJP_RS01970 6b2c986faf53e5b84e03978a9a4329e2 600 Gene3D G3DSA:3.40.50.300 1 198 1.6E-55 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RJP_RS01970 6b2c986faf53e5b84e03978a9a4329e2 600 Pfam PF06421 GTP-binding protein LepA C-terminus 490 596 1.9E-48 T 25-04-2016 IPR013842 GTP-binding protein LepA, C-terminal RJP_RS01970 6b2c986faf53e5b84e03978a9a4329e2 600 Hamap MF_00071 Elongation factor 4 [lepA]. 1 600 293.113 T 25-04-2016 IPR006297 Elongation factor 4 GO:0005525 RJP_RS01970 6b2c986faf53e5b84e03978a9a4329e2 600 PANTHER PTHR23115:SF175 400 598 0.0 T 25-04-2016 RJP_RS01970 6b2c986faf53e5b84e03978a9a4329e2 600 PANTHER PTHR23115:SF175 1 376 0.0 T 25-04-2016 RJP_RS00390 d075fea8a6c03f534d398d159860e114 637 Gene3D G3DSA:3.40.50.300 148 332 8.9E-64 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RJP_RS00390 d075fea8a6c03f534d398d159860e114 637 TIGRFAM TIGR01241 FtsH_fam: ATP-dependent metallopeptidase HflB 104 593 3.2E-236 T 25-04-2016 IPR005936 Peptidase, FtsH GO:0004222|GO:0016020 RJP_RS00390 d075fea8a6c03f534d398d159860e114 637 ProSitePatterns PS00674 AAA-protein family signature. 294 312 - T 25-04-2016 IPR003960 ATPase, AAA-type, conserved site GO:0005524 RJP_RS00390 d075fea8a6c03f534d398d159860e114 637 PANTHER PTHR23076 6 603 0.0 T 25-04-2016 RJP_RS00390 d075fea8a6c03f534d398d159860e114 637 SUPERFAMILY SSF140990 406 598 1.28E-68 T 25-04-2016 RJP_RS00390 d075fea8a6c03f534d398d159860e114 637 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 192 322 5.4E-45 T 25-04-2016 IPR003959 ATPase, AAA-type, core GO:0005524 RJP_RS00390 d075fea8a6c03f534d398d159860e114 637 Gene3D G3DSA:1.10.8.60 333 399 6.9E-24 T 25-04-2016 RJP_RS00390 d075fea8a6c03f534d398d159860e114 637 Hamap MF_01458 ATP-dependent zinc metalloprotease FtsH [ftsH]. 6 605 35.992 T 25-04-2016 IPR005936 Peptidase, FtsH GO:0004222|GO:0016020 RJP_RS00390 d075fea8a6c03f534d398d159860e114 637 SMART SM00382 187 326 3.1E-23 T 25-04-2016 IPR003593 AAA+ ATPase domain RJP_RS00390 d075fea8a6c03f534d398d159860e114 637 Pfam PF01434 Peptidase family M41 385 592 6.6E-74 T 25-04-2016 IPR000642 Peptidase M41 GO:0004222|GO:0005524|GO:0006508 RJP_RS00390 d075fea8a6c03f534d398d159860e114 637 Pfam PF06480 FtsH Extracellular 8 93 2.3E-10 T 25-04-2016 IPR011546 Peptidase M41, FtsH extracellular GO:0004222|GO:0005524|GO:0008270|GO:0016021 RJP_RS00390 d075fea8a6c03f534d398d159860e114 637 SUPERFAMILY SSF52540 146 394 3.82E-70 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RJP_RS02785 48830c74d6354f253619bc6823ea6876 507 PANTHER PTHR31187:SF1 20 507 4.1E-100 T 25-04-2016 RJP_RS02785 48830c74d6354f253619bc6823ea6876 507 TIGRFAM TIGR00769 AAA: ADP/ATP carrier protein family 26 501 3.5E-125 T 25-04-2016 IPR004667 ADP/ATP carrier protein GO:0005471|GO:0005524|GO:0006810|GO:0016021 RJP_RS02785 48830c74d6354f253619bc6823ea6876 507 PANTHER PTHR31187 20 507 4.1E-100 T 25-04-2016 IPR004667 ADP/ATP carrier protein GO:0005471|GO:0005524|GO:0006810|GO:0016021 RJP_RS02785 48830c74d6354f253619bc6823ea6876 507 Pfam PF03219 TLC ATP/ADP transporter 13 501 1.0E-187 T 25-04-2016 IPR004667 ADP/ATP carrier protein GO:0005471|GO:0005524|GO:0006810|GO:0016021 RJP_RS04230 ecf9d8fbcac867a9fa9b2a38b452ebd8 831 PANTHER PTHR23115:SF184 307 659 5.2E-191 T 25-04-2016 RJP_RS04230 ecf9d8fbcac867a9fa9b2a38b452ebd8 831 PANTHER PTHR23115:SF184 684 831 5.2E-191 T 25-04-2016 RJP_RS04230 ecf9d8fbcac867a9fa9b2a38b452ebd8 831 PANTHER PTHR23115 307 659 5.2E-191 T 25-04-2016 RJP_RS04230 ecf9d8fbcac867a9fa9b2a38b452ebd8 831 PANTHER PTHR23115 684 831 5.2E-191 T 25-04-2016 RJP_RS04230 ecf9d8fbcac867a9fa9b2a38b452ebd8 831 SUPERFAMILY SSF52156 622 738 1.26E-37 T 25-04-2016 IPR023115 Translation initiation factor IF- 2, domain 3 RJP_RS04230 ecf9d8fbcac867a9fa9b2a38b452ebd8 831 Pfam PF04760 Translation initiation factor IF-2, N-terminal region 257 304 7.4E-12 T 25-04-2016 IPR006847 Translation initiation factor IF-2, N-terminal RJP_RS04230 ecf9d8fbcac867a9fa9b2a38b452ebd8 831 Gene3D G3DSA:3.40.50.300 323 490 5.7E-45 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RJP_RS04230 ecf9d8fbcac867a9fa9b2a38b452ebd8 831 Pfam PF00009 Elongation factor Tu GTP binding domain 333 491 6.6E-31 T 25-04-2016 RJP_RS04230 ecf9d8fbcac867a9fa9b2a38b452ebd8 831 SUPERFAMILY SSF50447 733 829 3.93E-30 T 25-04-2016 IPR009000 Translation protein, beta-barrel domain RJP_RS04230 ecf9d8fbcac867a9fa9b2a38b452ebd8 831 Gene3D G3DSA:2.40.30.10 733 829 3.9E-35 T 25-04-2016 RJP_RS04230 ecf9d8fbcac867a9fa9b2a38b452ebd8 831 SUPERFAMILY SSF52540 322 500 1.36E-49 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RJP_RS04230 ecf9d8fbcac867a9fa9b2a38b452ebd8 831 SUPERFAMILY SSF50447 505 585 1.97E-21 T 25-04-2016 IPR009000 Translation protein, beta-barrel domain RJP_RS04230 ecf9d8fbcac867a9fa9b2a38b452ebd8 831 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 332 486 7.6E-30 T 25-04-2016 IPR005225 Small GTP-binding protein domain GO:0005525 RJP_RS04230 ecf9d8fbcac867a9fa9b2a38b452ebd8 831 Pfam PF11987 Translation-initiation factor 2 625 721 2.4E-37 T 25-04-2016 IPR023115 Translation initiation factor IF- 2, domain 3 RJP_RS04230 ecf9d8fbcac867a9fa9b2a38b452ebd8 831 ProSitePatterns PS01176 Initiation factor 2 signature. 782 804 - T 25-04-2016 IPR000178 Translation initiation factor aIF-2, bacterial-like GO:0003743|GO:0005525|GO:0005622|GO:0006413 RJP_RS04230 ecf9d8fbcac867a9fa9b2a38b452ebd8 831 Gene3D G3DSA:3.40.50.10050 632 710 1.8E-24 T 25-04-2016 IPR023115 Translation initiation factor IF- 2, domain 3 RJP_RS04230 ecf9d8fbcac867a9fa9b2a38b452ebd8 831 Gene3D G3DSA:2.40.30.10 504 594 9.9E-21 T 25-04-2016 RJP_RS04230 ecf9d8fbcac867a9fa9b2a38b452ebd8 831 TIGRFAM TIGR00487 IF-2: translation initiation factor IF-2 248 830 2.7E-233 T 25-04-2016 IPR000178 Translation initiation factor aIF-2, bacterial-like GO:0003743|GO:0005525|GO:0005622|GO:0006413 RJP_RS04230 ecf9d8fbcac867a9fa9b2a38b452ebd8 831 Hamap MF_00100_B Translation initiation factor IF-2 [infB]. 16 829 16.418 T 25-04-2016 IPR000178 Translation initiation factor aIF-2, bacterial-like GO:0003743|GO:0005525|GO:0005622|GO:0006413 RJP_RS06770 487ce8739889bf16a4713eea89a1cf44 204 PANTHER PTHR13205 1 191 2.7E-15 T 25-04-2016 IPR032974 Polyprenol kinase family RJP_RS02980 c9762511625afe87419e78a972e51513 454 Gene3D G3DSA:3.40.1190.10 237 309 2.0E-58 T 25-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 RJP_RS02980 c9762511625afe87419e78a972e51513 454 Gene3D G3DSA:3.40.1190.10 57 200 2.0E-58 T 25-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 RJP_RS02980 c9762511625afe87419e78a972e51513 454 Hamap MF_00639 UDP-N-acetylmuramoylalanine--D-glutamate ligase [murD]. 5 444 27.794 T 25-04-2016 IPR005762 UDP-N-acetylmuramoylalanine-D-glutamate ligase GO:0005524|GO:0005737|GO:0008360|GO:0008764|GO:0051301 KEGG: 00471+6.3.2.9|KEGG: 00550+6.3.2.9|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 RJP_RS02980 c9762511625afe87419e78a972e51513 454 TIGRFAM TIGR01087 murD: UDP-N-acetylmuramoylalanine--D-glutamate ligase 12 442 5.1E-120 T 25-04-2016 IPR005762 UDP-N-acetylmuramoylalanine-D-glutamate ligase GO:0005524|GO:0005737|GO:0008360|GO:0008764|GO:0051301 KEGG: 00471+6.3.2.9|KEGG: 00550+6.3.2.9|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 RJP_RS02980 c9762511625afe87419e78a972e51513 454 TIGRFAM TIGR03775 RPE3: rickettsial palindromic element RPE3 domain 221 263 7.1E-26 T 25-04-2016 IPR022437 Rickettsia palindromic element RPE3 RJP_RS02980 c9762511625afe87419e78a972e51513 454 PANTHER PTHR23135:SF2 17 232 1.6E-115 T 25-04-2016 RJP_RS02980 c9762511625afe87419e78a972e51513 454 PANTHER PTHR23135:SF2 255 440 1.6E-115 T 25-04-2016 RJP_RS02980 c9762511625afe87419e78a972e51513 454 SUPERFAMILY SSF53244 305 441 4.17E-33 T 25-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 RJP_RS02980 c9762511625afe87419e78a972e51513 454 ProSitePatterns PS01011 Folylpolyglutamate synthase signature 1. 63 86 - T 25-04-2016 IPR018109 Folylpolyglutamate synthetase, conserved site GO:0004326|GO:0005524|GO:0009396 RJP_RS02980 c9762511625afe87419e78a972e51513 454 PANTHER PTHR23135 17 232 1.6E-115 T 25-04-2016 RJP_RS02980 c9762511625afe87419e78a972e51513 454 PANTHER PTHR23135 255 440 1.6E-115 T 25-04-2016 RJP_RS02980 c9762511625afe87419e78a972e51513 454 Pfam PF08245 Mur ligase middle domain 65 285 6.5E-31 T 25-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 RJP_RS02980 c9762511625afe87419e78a972e51513 454 SUPERFAMILY SSF53623 23 191 4.06E-47 T 25-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 RJP_RS02980 c9762511625afe87419e78a972e51513 454 SUPERFAMILY SSF53623 235 318 4.06E-47 T 25-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 RJP_RS02980 c9762511625afe87419e78a972e51513 454 Gene3D G3DSA:3.90.190.20 310 440 1.3E-35 T 25-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 RJP_RS06200 cb25cafb7839e44a9a7a7c57c8d1d085 251 TIGRFAM TIGR00945 tatC: twin arginine-targeting protein translocase TatC 7 228 1.2E-57 T 25-04-2016 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 RJP_RS06200 cb25cafb7839e44a9a7a7c57c8d1d085 251 Hamap MF_00902 Sec-independent protein translocase protein TatC [tatC]. 2 242 16.629 T 25-04-2016 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 RJP_RS06200 cb25cafb7839e44a9a7a7c57c8d1d085 251 PANTHER PTHR30371:SF0 5 240 8.4E-70 T 25-04-2016 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 RJP_RS06200 cb25cafb7839e44a9a7a7c57c8d1d085 251 PRINTS PR01840 Bacterial Sec-independent translocation TatC protein family signature 5 32 1.5E-34 T 25-04-2016 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 RJP_RS06200 cb25cafb7839e44a9a7a7c57c8d1d085 251 PRINTS PR01840 Bacterial Sec-independent translocation TatC protein family signature 156 184 1.5E-34 T 25-04-2016 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 RJP_RS06200 cb25cafb7839e44a9a7a7c57c8d1d085 251 PRINTS PR01840 Bacterial Sec-independent translocation TatC protein family signature 101 127 1.5E-34 T 25-04-2016 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 RJP_RS06200 cb25cafb7839e44a9a7a7c57c8d1d085 251 PRINTS PR01840 Bacterial Sec-independent translocation TatC protein family signature 83 101 1.5E-34 T 25-04-2016 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 RJP_RS06200 cb25cafb7839e44a9a7a7c57c8d1d085 251 Pfam PF00902 Sec-independent protein translocase protein (TatC) 8 223 1.1E-58 T 25-04-2016 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 RJP_RS06200 cb25cafb7839e44a9a7a7c57c8d1d085 251 PANTHER PTHR30371 5 240 8.4E-70 T 25-04-2016 RJP_RS06200 cb25cafb7839e44a9a7a7c57c8d1d085 251 ProSitePatterns PS01218 TatC family signature. 156 175 - T 25-04-2016 IPR019820 Sec-independent periplasmic protein translocase, conserved site RJP_RS01425 6968b5d8bc81f444de84a5cf78950df1 102 Pfam PF00462 Glutaredoxin 9 70 1.2E-19 T 25-04-2016 IPR002109 Glutaredoxin GO:0009055|GO:0015035|GO:0045454 RJP_RS01425 6968b5d8bc81f444de84a5cf78950df1 102 Gene3D G3DSA:3.40.30.10 7 87 3.1E-26 T 25-04-2016 IPR012336 Thioredoxin-like fold RJP_RS01425 6968b5d8bc81f444de84a5cf78950df1 102 PANTHER PTHR10168 9 91 3.8E-21 T 25-04-2016 RJP_RS01425 6968b5d8bc81f444de84a5cf78950df1 102 ProSitePatterns PS00195 Glutaredoxin active site. 11 27 - T 25-04-2016 IPR011767 Glutaredoxin active site GO:0009055|GO:0045454 RJP_RS01425 6968b5d8bc81f444de84a5cf78950df1 102 SUPERFAMILY SSF52833 7 91 2.42E-25 T 25-04-2016 IPR012336 Thioredoxin-like fold RJP_RS01425 6968b5d8bc81f444de84a5cf78950df1 102 TIGRFAM TIGR02181 GRX_bact: glutaredoxin 3 9 89 1.5E-34 T 25-04-2016 IPR011900 Glutaredoxin, GrxC GO:0045454 RJP_RS01425 6968b5d8bc81f444de84a5cf78950df1 102 PRINTS PR00160 Glutaredoxin signature 53 66 1.3E-13 T 25-04-2016 IPR014025 Glutaredoxin subgroup RJP_RS01425 6968b5d8bc81f444de84a5cf78950df1 102 PRINTS PR00160 Glutaredoxin signature 67 80 1.3E-13 T 25-04-2016 IPR014025 Glutaredoxin subgroup RJP_RS01425 6968b5d8bc81f444de84a5cf78950df1 102 PRINTS PR00160 Glutaredoxin signature 9 27 1.3E-13 T 25-04-2016 IPR014025 Glutaredoxin subgroup RJP_RS02560 3603341b8edfdf0b9628d19cac1b4694 80 ProDom PD028235 EXONUCLEASE SMALL SUBUNIT VII EXODEOXYRIBONUCLEASE HYDROLASE NUCLEASE PROBABLE VII SIMILAR 1 53 2.0E-21 T 25-04-2016 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 RJP_RS02560 3603341b8edfdf0b9628d19cac1b4694 80 PANTHER PTHR34137 1 67 7.1E-17 T 25-04-2016 RJP_RS02560 3603341b8edfdf0b9628d19cac1b4694 80 SUPERFAMILY SSF116842 9 69 1.44E-18 T 25-04-2016 RJP_RS02560 3603341b8edfdf0b9628d19cac1b4694 80 Gene3D G3DSA:1.10.287.1040 9 73 1.8E-21 T 25-04-2016 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 RJP_RS02560 3603341b8edfdf0b9628d19cac1b4694 80 Pfam PF02609 Exonuclease VII small subunit 13 64 7.5E-18 T 25-04-2016 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 RJP_RS02560 3603341b8edfdf0b9628d19cac1b4694 80 TIGRFAM TIGR01280 xseB: exodeoxyribonuclease VII, small subunit 12 66 6.9E-22 T 25-04-2016 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 RJP_RS02560 3603341b8edfdf0b9628d19cac1b4694 80 Hamap MF_00337 Exodeoxyribonuclease 7 small subunit [xseB]. 12 72 15.365 T 25-04-2016 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 RJP_RS02560 3603341b8edfdf0b9628d19cac1b4694 80 PIRSF PIRSF006488 1 79 5.5E-23 T 25-04-2016 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 RJP_RS06205 9b3986a791b22a3fd15ce1d65a6fb50a 425 PRINTS PR00981 Seryl-tRNA synthetase signature 261 273 2.3E-33 T 25-04-2016 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281|Reactome: REACT_71|UniPathway: UPA00906 RJP_RS06205 9b3986a791b22a3fd15ce1d65a6fb50a 425 PRINTS PR00981 Seryl-tRNA synthetase signature 348 364 2.3E-33 T 25-04-2016 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281|Reactome: REACT_71|UniPathway: UPA00906 RJP_RS06205 9b3986a791b22a3fd15ce1d65a6fb50a 425 PRINTS PR00981 Seryl-tRNA synthetase signature 330 346 2.3E-33 T 25-04-2016 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281|Reactome: REACT_71|UniPathway: UPA00906 RJP_RS06205 9b3986a791b22a3fd15ce1d65a6fb50a 425 PRINTS PR00981 Seryl-tRNA synthetase signature 273 286 2.3E-33 T 25-04-2016 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281|Reactome: REACT_71|UniPathway: UPA00906 RJP_RS06205 9b3986a791b22a3fd15ce1d65a6fb50a 425 PRINTS PR00981 Seryl-tRNA synthetase signature 313 326 2.3E-33 T 25-04-2016 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281|Reactome: REACT_71|UniPathway: UPA00906 RJP_RS06205 9b3986a791b22a3fd15ce1d65a6fb50a 425 Gene3D G3DSA:1.10.287.40 1 100 6.5E-16 T 25-04-2016 IPR015866 Serine-tRNA synthetase, type1, N-terminal KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281|UniPathway: UPA00906 RJP_RS06205 9b3986a791b22a3fd15ce1d65a6fb50a 425 Hamap MF_00176 Serine--tRNA ligase [serS]. 1 419 38.406 T 25-04-2016 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281|Reactome: REACT_71|UniPathway: UPA00906 RJP_RS06205 9b3986a791b22a3fd15ce1d65a6fb50a 425 SUPERFAMILY SSF55681 116 415 1.49E-87 T 25-04-2016 RJP_RS06205 9b3986a791b22a3fd15ce1d65a6fb50a 425 SUPERFAMILY SSF46589 1 112 1.57E-19 T 25-04-2016 IPR010978 tRNA-binding arm GO:0000166 Reactome: REACT_71 RJP_RS06205 9b3986a791b22a3fd15ce1d65a6fb50a 425 PANTHER PTHR11778 1 421 3.7E-171 T 25-04-2016 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281|Reactome: REACT_71|UniPathway: UPA00906 RJP_RS06205 9b3986a791b22a3fd15ce1d65a6fb50a 425 Pfam PF00587 tRNA synthetase class II core domain (G, H, P, S and T) 222 397 1.3E-33 T 25-04-2016 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 RJP_RS06205 9b3986a791b22a3fd15ce1d65a6fb50a 425 TIGRFAM TIGR00414 serS: serine--tRNA ligase 1 414 1.3E-144 T 25-04-2016 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281|Reactome: REACT_71|UniPathway: UPA00906 RJP_RS06205 9b3986a791b22a3fd15ce1d65a6fb50a 425 Gene3D G3DSA:3.30.930.10 105 417 5.5E-127 T 25-04-2016 RJP_RS06205 9b3986a791b22a3fd15ce1d65a6fb50a 425 PANTHER PTHR11778:SF0 1 421 3.7E-171 T 25-04-2016 RJP_RS06205 9b3986a791b22a3fd15ce1d65a6fb50a 425 Pfam PF02403 Seryl-tRNA synthetase N-terminal domain 1 107 7.8E-20 T 25-04-2016 IPR015866 Serine-tRNA synthetase, type1, N-terminal KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281|UniPathway: UPA00906 RJP_RS06205 9b3986a791b22a3fd15ce1d65a6fb50a 425 PIRSF PIRSF001529 1 423 1.1E-153 T 25-04-2016 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281|Reactome: REACT_71|UniPathway: UPA00906 RJP_RS06635 3cedc0ebb623cd4011824d4fceb5e065 621 Hamap MF_00505 Chaperone protein HtpG [htpG]. 1 617 29.349 T 25-04-2016 IPR001404 Heat shock protein Hsp90 family GO:0005524|GO:0006457|GO:0006950|GO:0051082 RJP_RS06635 3cedc0ebb623cd4011824d4fceb5e065 621 SUPERFAMILY SSF54211 222 473 2.05E-84 T 25-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold RJP_RS06635 3cedc0ebb623cd4011824d4fceb5e065 621 PANTHER PTHR11528:SF44 4 620 1.7E-257 T 25-04-2016 RJP_RS06635 3cedc0ebb623cd4011824d4fceb5e065 621 ProSitePatterns PS00298 Heat shock hsp90 proteins family signature. 24 33 - T 25-04-2016 IPR019805 Heat shock protein Hsp90, conserved site GO:0005524|GO:0006457|GO:0006950|GO:0051082 RJP_RS06635 3cedc0ebb623cd4011824d4fceb5e065 621 SUPERFAMILY SSF55874 3 212 3.67E-65 T 25-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RJP_RS06635 3cedc0ebb623cd4011824d4fceb5e065 621 PRINTS PR00775 90kDa heat shock protein signature 4 24 1.3E-59 T 25-04-2016 IPR020575 Heat shock protein Hsp90, N-terminal RJP_RS06635 3cedc0ebb623cd4011824d4fceb5e065 621 PRINTS PR00775 90kDa heat shock protein signature 119 141 1.3E-59 T 25-04-2016 IPR020575 Heat shock protein Hsp90, N-terminal RJP_RS06635 3cedc0ebb623cd4011824d4fceb5e065 621 PRINTS PR00775 90kDa heat shock protein signature 92 109 1.3E-59 T 25-04-2016 IPR020575 Heat shock protein Hsp90, N-terminal RJP_RS06635 3cedc0ebb623cd4011824d4fceb5e065 621 PRINTS PR00775 90kDa heat shock protein signature 188 206 1.3E-59 T 25-04-2016 IPR020575 Heat shock protein Hsp90, N-terminal RJP_RS06635 3cedc0ebb623cd4011824d4fceb5e065 621 PRINTS PR00775 90kDa heat shock protein signature 170 187 1.3E-59 T 25-04-2016 IPR020575 Heat shock protein Hsp90, N-terminal RJP_RS06635 3cedc0ebb623cd4011824d4fceb5e065 621 PRINTS PR00775 90kDa heat shock protein signature 25 47 1.3E-59 T 25-04-2016 IPR020575 Heat shock protein Hsp90, N-terminal RJP_RS06635 3cedc0ebb623cd4011824d4fceb5e065 621 PRINTS PR00775 90kDa heat shock protein signature 74 91 1.3E-59 T 25-04-2016 IPR020575 Heat shock protein Hsp90, N-terminal RJP_RS06635 3cedc0ebb623cd4011824d4fceb5e065 621 PIRSF PIRSF002583 2 620 3.0E-211 T 25-04-2016 IPR001404 Heat shock protein Hsp90 family GO:0005524|GO:0006457|GO:0006950|GO:0051082 RJP_RS06635 3cedc0ebb623cd4011824d4fceb5e065 621 Gene3D G3DSA:3.30.565.10 4 229 4.5E-80 T 25-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RJP_RS06635 3cedc0ebb623cd4011824d4fceb5e065 621 Pfam PF13589 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 26 153 3.2E-14 T 25-04-2016 RJP_RS06635 3cedc0ebb623cd4011824d4fceb5e065 621 SUPERFAMILY SSF110942 503 616 9.42E-29 T 25-04-2016 RJP_RS06635 3cedc0ebb623cd4011824d4fceb5e065 621 PANTHER PTHR11528 4 620 1.7E-257 T 25-04-2016 IPR001404 Heat shock protein Hsp90 family GO:0005524|GO:0006457|GO:0006950|GO:0051082 RJP_RS06635 3cedc0ebb623cd4011824d4fceb5e065 621 SMART SM00387 26 182 2.2E-8 T 25-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RJP_RS06635 3cedc0ebb623cd4011824d4fceb5e065 621 Pfam PF00183 Hsp90 protein 215 619 2.1E-110 T 25-04-2016 IPR001404 Heat shock protein Hsp90 family GO:0005524|GO:0006457|GO:0006950|GO:0051082 RJP_RS00375 abda34c93f9a39024a91d28de73cbb19 95 Pfam PF01084 Ribosomal protein S18 40 88 3.1E-22 T 25-04-2016 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RJP_RS00375 abda34c93f9a39024a91d28de73cbb19 95 ProSitePatterns PS00057 Ribosomal protein S18 signature. 41 64 - T 25-04-2016 IPR018275 Ribosomal protein S18, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 RJP_RS00375 abda34c93f9a39024a91d28de73cbb19 95 SUPERFAMILY SSF46911 18 93 1.14E-25 T 25-04-2016 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RJP_RS00375 abda34c93f9a39024a91d28de73cbb19 95 PRINTS PR00974 Ribosomal protein S18 family signature 58 65 1.7E-13 T 25-04-2016 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RJP_RS00375 abda34c93f9a39024a91d28de73cbb19 95 PRINTS PR00974 Ribosomal protein S18 family signature 66 80 1.7E-13 T 25-04-2016 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RJP_RS00375 abda34c93f9a39024a91d28de73cbb19 95 PRINTS PR00974 Ribosomal protein S18 family signature 80 90 1.7E-13 T 25-04-2016 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RJP_RS00375 abda34c93f9a39024a91d28de73cbb19 95 PRINTS PR00974 Ribosomal protein S18 family signature 48 58 1.7E-13 T 25-04-2016 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RJP_RS00375 abda34c93f9a39024a91d28de73cbb19 95 ProDom PD002239 RIBOSOMAL S18 RIBONUCLEOPROTEIN 30S RRNA-BINDING RNA-BINDING CHLOROPLAST PLASTID MITOCHONDRIAL ACETYLATION 41 91 1.0E-22 T 25-04-2016 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RJP_RS00375 abda34c93f9a39024a91d28de73cbb19 95 TIGRFAM TIGR00165 S18: ribosomal protein bS18 24 91 3.5E-22 T 25-04-2016 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RJP_RS00375 abda34c93f9a39024a91d28de73cbb19 95 PANTHER PTHR13479 20 92 3.4E-22 T 25-04-2016 RJP_RS00375 abda34c93f9a39024a91d28de73cbb19 95 Hamap MF_00270 30S ribosomal protein S18 [rpsR]. 22 93 19.566 T 25-04-2016 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RJP_RS00375 abda34c93f9a39024a91d28de73cbb19 95 Gene3D G3DSA:4.10.640.10 18 92 1.3E-26 T 25-04-2016 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RJP_RS01420 ac5b1e3dc510e7f8e50186b87015369a 661 SUPERFAMILY SSF52540 1 414 1.43E-133 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RJP_RS01420 ac5b1e3dc510e7f8e50186b87015369a 661 Gene3D G3DSA:3.40.50.300 387 408 6.3E-50 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RJP_RS01420 ac5b1e3dc510e7f8e50186b87015369a 661 Gene3D G3DSA:3.40.50.300 277 337 6.3E-50 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RJP_RS01420 ac5b1e3dc510e7f8e50186b87015369a 661 Gene3D G3DSA:3.40.50.300 7 88 6.3E-50 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RJP_RS01420 ac5b1e3dc510e7f8e50186b87015369a 661 TIGRFAM TIGR00631 uvrb: excinuclease ABC subunit B 4 653 0.0 T 25-04-2016 IPR004807 UvrABC system, subunit B GO:0003677|GO:0005524|GO:0006281|GO:0006289|GO:0009381|GO:0009432 RJP_RS01420 ac5b1e3dc510e7f8e50186b87015369a 661 Pfam PF12344 Ultra-violet resistance protein B 551 592 9.0E-21 T 25-04-2016 IPR024759 UvrB, YAD/RRR-motif-containing domain RJP_RS01420 ac5b1e3dc510e7f8e50186b87015369a 661 Gene3D G3DSA:4.10.860.10 617 657 1.1E-13 T 25-04-2016 IPR001943 UVR domain GO:0005515 RJP_RS01420 ac5b1e3dc510e7f8e50186b87015369a 661 SUPERFAMILY SSF52540 32 81 1.25E-34 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RJP_RS01420 ac5b1e3dc510e7f8e50186b87015369a 661 SUPERFAMILY SSF52540 458 572 1.25E-34 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RJP_RS01420 ac5b1e3dc510e7f8e50186b87015369a 661 SUPERFAMILY SSF46600 618 656 1.26E-9 T 25-04-2016 IPR001943 UVR domain GO:0005515 RJP_RS01420 ac5b1e3dc510e7f8e50186b87015369a 661 Gene3D G3DSA:3.30.2060.10 158 238 1.9E-13 T 25-04-2016 RJP_RS01420 ac5b1e3dc510e7f8e50186b87015369a 661 Gene3D G3DSA:3.40.50.300 418 580 1.6E-37 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RJP_RS01420 ac5b1e3dc510e7f8e50186b87015369a 661 SMART SM00490 459 545 2.6E-19 T 25-04-2016 IPR001650 Helicase, C-terminal RJP_RS01420 ac5b1e3dc510e7f8e50186b87015369a 661 Pfam PF00271 Helicase conserved C-terminal domain 432 544 2.7E-18 T 25-04-2016 IPR001650 Helicase, C-terminal RJP_RS01420 ac5b1e3dc510e7f8e50186b87015369a 661 Hamap MF_00204 UvrABC system protein B [uvrB]. 2 656 42.914 T 25-04-2016 IPR004807 UvrABC system, subunit B GO:0003677|GO:0005524|GO:0006281|GO:0006289|GO:0009381|GO:0009432 RJP_RS01420 ac5b1e3dc510e7f8e50186b87015369a 661 SMART SM00487 8 420 1.4E-24 T 25-04-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain RJP_RS01420 ac5b1e3dc510e7f8e50186b87015369a 661 Pfam PF04851 Type III restriction enzyme, res subunit 12 137 2.5E-10 T 25-04-2016 IPR006935 Helicase/UvrB, N-terminal GO:0003677|GO:0005524|GO:0016787 RJP_RS01420 ac5b1e3dc510e7f8e50186b87015369a 661 Pfam PF02151 UvrB/uvrC motif 624 655 4.0E-8 T 25-04-2016 IPR001943 UVR domain GO:0005515 RJP_RS01420 ac5b1e3dc510e7f8e50186b87015369a 661 PANTHER PTHR24029 1 660 0.0 T 25-04-2016 IPR004807 UvrABC system, subunit B GO:0003677|GO:0005524|GO:0006281|GO:0006289|GO:0009381|GO:0009432 RJP_RS03505 027c665ec4bb648617cdb41c5ed6f9ac 345 SUPERFAMILY SSF55120 2 223 3.17E-71 T 25-04-2016 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 RJP_RS03505 027c665ec4bb648617cdb41c5ed6f9ac 345 TIGRFAM TIGR01045 RPE1: rickettsial palindromic element RPE1 domain 262 309 4.6E-29 T 25-04-2016 IPR005728 Rickettsial palindromic element RJP_RS03505 027c665ec4bb648617cdb41c5ed6f9ac 345 Hamap MF_01080 tRNA pseudouridine synthase B [truB]. 2 338 16.743 T 25-04-2016 IPR014780 tRNA pseudouridine synthase II, TruB GO:0001522|GO:0003723|GO:0009451|GO:0009982 RJP_RS03505 027c665ec4bb648617cdb41c5ed6f9ac 345 TIGRFAM TIGR00431 TruB: tRNA pseudouridine(55) synthase 6 209 7.3E-65 T 25-04-2016 IPR014780 tRNA pseudouridine synthase II, TruB GO:0001522|GO:0003723|GO:0009451|GO:0009982 RJP_RS03505 027c665ec4bb648617cdb41c5ed6f9ac 345 Pfam PF16198 tRNA pseudouridylate synthase B C-terminal domain 174 214 6.4E-8 T 25-04-2016 IPR032819 tRNA pseudouridylate synthase B, C-terminal RJP_RS03505 027c665ec4bb648617cdb41c5ed6f9ac 345 PANTHER PTHR13767 5 252 3.6E-84 T 25-04-2016 IPR014780 tRNA pseudouridine synthase II, TruB GO:0001522|GO:0003723|GO:0009451|GO:0009982 RJP_RS03505 027c665ec4bb648617cdb41c5ed6f9ac 345 PANTHER PTHR13767:SF2 5 252 3.6E-84 T 25-04-2016 RJP_RS03505 027c665ec4bb648617cdb41c5ed6f9ac 345 Pfam PF01509 TruB family pseudouridylate synthase (N terminal domain) 24 173 3.8E-51 T 25-04-2016 IPR002501 Pseudouridine synthase II, N-terminal GO:0006396 RJP_RS02830 42b3d6cc57142239f3b13bd89dc9569f 322 PANTHER PTHR13504:SF32 33 249 7.5E-41 T 25-04-2016 RJP_RS02830 42b3d6cc57142239f3b13bd89dc9569f 322 Pfam PF02661 Fic/DOC family 99 197 3.2E-20 T 25-04-2016 IPR003812 Fido domain RJP_RS02830 42b3d6cc57142239f3b13bd89dc9569f 322 Gene3D G3DSA:1.10.3290.10 34 256 3.8E-54 T 25-04-2016 IPR003812 Fido domain RJP_RS02830 42b3d6cc57142239f3b13bd89dc9569f 322 PANTHER PTHR13504 33 249 7.5E-41 T 25-04-2016 RJP_RS02830 42b3d6cc57142239f3b13bd89dc9569f 322 SUPERFAMILY SSF140931 79 255 1.83E-38 T 25-04-2016 IPR003812 Fido domain RJP_RS01830 4d66532e2a61fbb45b006bc6720daba3 382 SUPERFAMILY SSF103473 4 378 1.7E-15 T 25-04-2016 IPR020846 Major facilitator superfamily domain RJP_RS01830 4d66532e2a61fbb45b006bc6720daba3 382 Gene3D G3DSA:1.20.1250.20 8 184 1.3E-7 T 25-04-2016 RJP_RS05890 7e293f421d500e52b394364b6df66fbc 210 Pfam PF10576 Iron-sulfur binding domain of endonuclease III 187 203 1.7E-5 T 25-04-2016 IPR003651 Endonuclease III-like, iron-sulphur cluster loop motif GO:0051539 Reactome: REACT_216 RJP_RS05890 7e293f421d500e52b394364b6df66fbc 210 ProSitePatterns PS01155 Endonuclease III family signature. 102 131 - T 25-04-2016 IPR004036 Endonuclease III-like, conserved site-2 Reactome: REACT_216 RJP_RS05890 7e293f421d500e52b394364b6df66fbc 210 Gene3D G3DSA:1.10.340.30 25 122 1.2E-34 T 25-04-2016 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: REACT_216 RJP_RS05890 7e293f421d500e52b394364b6df66fbc 210 PANTHER PTHR10359 1 206 2.5E-82 T 25-04-2016 RJP_RS05890 7e293f421d500e52b394364b6df66fbc 210 TIGRFAM TIGR01083 nth: endonuclease III 4 194 4.6E-88 T 25-04-2016 IPR005759 Endonuclease III GO:0003906|GO:0006284 RJP_RS05890 7e293f421d500e52b394364b6df66fbc 210 SUPERFAMILY SSF48150 4 208 2.98E-70 T 25-04-2016 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: REACT_216 RJP_RS05890 7e293f421d500e52b394364b6df66fbc 210 PIRSF PIRSF001435 1 209 1.9E-51 T 25-04-2016 IPR005759 Endonuclease III GO:0003906|GO:0006284 RJP_RS05890 7e293f421d500e52b394364b6df66fbc 210 Pfam PF00730 HhH-GPD superfamily base excision DNA repair protein 34 167 2.1E-23 T 25-04-2016 IPR003265 HhH-GPD domain GO:0006284 Reactome: REACT_216 RJP_RS05890 7e293f421d500e52b394364b6df66fbc 210 Gene3D G3DSA:1.10.1670.10 123 206 6.0E-35 T 25-04-2016 IPR023170 Helix-turn-helix, base-excision DNA repair, C-terminal RJP_RS05890 7e293f421d500e52b394364b6df66fbc 210 Hamap MF_00942 Endonuclease III [nth]. 1 209 37.563 T 25-04-2016 IPR005759 Endonuclease III GO:0003906|GO:0006284 RJP_RS05890 7e293f421d500e52b394364b6df66fbc 210 Pfam PF00633 Helix-hairpin-helix motif 100 127 2.6E-6 T 25-04-2016 IPR000445 Helix-hairpin-helix motif GO:0003677 RJP_RS05890 7e293f421d500e52b394364b6df66fbc 210 SMART SM00478 38 185 2.4E-61 T 25-04-2016 IPR003265 HhH-GPD domain GO:0006284 Reactome: REACT_216 RJP_RS05890 7e293f421d500e52b394364b6df66fbc 210 PANTHER PTHR10359:SF18 1 206 2.5E-82 T 25-04-2016 RJP_RS05890 7e293f421d500e52b394364b6df66fbc 210 SMART SM00525 186 206 5.3E-6 T 25-04-2016 IPR003651 Endonuclease III-like, iron-sulphur cluster loop motif GO:0051539 Reactome: REACT_216 RJP_RS07030 710eb2c4a44ac58efdc2022aa3df14ed 119 TIGRFAM TIGR01414 autotrans_barl: outer membrane autotransporter barrel domain 2 104 7.1E-6 T 25-04-2016 IPR006315 Outer membrane autotransporter barrel GO:0019867 RJP_RS07030 710eb2c4a44ac58efdc2022aa3df14ed 119 Pfam PF03797 Autotransporter beta-domain 2 118 1.0E-16 T 25-04-2016 IPR005546 Autotransporter beta-domain RJP_RS07030 710eb2c4a44ac58efdc2022aa3df14ed 119 SUPERFAMILY SSF103515 2 117 5.89E-15 T 25-04-2016 IPR005546 Autotransporter beta-domain RJP_RS07030 710eb2c4a44ac58efdc2022aa3df14ed 119 Gene3D G3DSA:2.40.128.130 3 118 1.1E-12 T 25-04-2016 IPR005546 Autotransporter beta-domain RJP_RS01890 527ed3953e9772eff21a3feab18e091e 483 Pfam PF00180 Isocitrate/isopropylmalate dehydrogenase 7 337 1.0E-95 T 25-04-2016 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 RJP_RS01890 527ed3953e9772eff21a3feab18e091e 483 SMART SM01329 6 337 1.8E-149 T 25-04-2016 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 RJP_RS01890 527ed3953e9772eff21a3feab18e091e 483 TIGRFAM TIGR02924 ICDH_alpha: isocitrate dehydrogenase 5 477 3.7E-245 T 25-04-2016 IPR014273 Isocitrate dehydrogenase, alphaproteobacteria-type GO:0004450|GO:0006097|GO:0006099|GO:0046872|GO:0055114 KEGG: 00020+1.1.1.42|KEGG: 00480+1.1.1.42|KEGG: 00720+1.1.1.42|MetaCyc: PWY-5913|MetaCyc: PWY-6549|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7124|MetaCyc: PWY-7254|MetaCyc: PWY-7268 RJP_RS01890 527ed3953e9772eff21a3feab18e091e 483 Gene3D G3DSA:3.40.718.10 5 353 9.1E-124 T 25-04-2016 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 RJP_RS01890 527ed3953e9772eff21a3feab18e091e 483 SUPERFAMILY SSF53659 5 341 5.58E-115 T 25-04-2016 RJP_RS01890 527ed3953e9772eff21a3feab18e091e 483 ProSitePatterns PS00470 Isocitrate and isopropylmalate dehydrogenases signature. 228 247 - T 25-04-2016 IPR019818 Isocitrate/isopropylmalate dehydrogenase, conserved site GO:0000287|GO:0016616|GO:0051287|GO:0055114 Reactome: REACT_1046 RJP_RS01890 527ed3953e9772eff21a3feab18e091e 483 PANTHER PTHR11835 6 349 7.2E-246 T 25-04-2016 IPR001804 Isocitrate and isopropylmalate dehydrogenases family GO:0000287|GO:0016616|GO:0051287|GO:0055114 Reactome: REACT_1046 RJP_RS01890 527ed3953e9772eff21a3feab18e091e 483 PANTHER PTHR11835:SF43 6 349 7.2E-246 T 25-04-2016 RJP_RS01730 574f7fd435d9a66172f0eb802b0fd9ae 450 Pfam PF00990 Diguanylate cyclase, GGDEF domain 288 446 2.4E-50 T 25-04-2016 IPR000160 GGDEF domain RJP_RS01730 574f7fd435d9a66172f0eb802b0fd9ae 450 Pfam PF00072 Response regulator receiver domain 4 115 1.9E-28 T 25-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 RJP_RS01730 574f7fd435d9a66172f0eb802b0fd9ae 450 Pfam PF00072 Response regulator receiver domain 154 265 4.6E-8 T 25-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 RJP_RS01730 574f7fd435d9a66172f0eb802b0fd9ae 450 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 287 448 5.9E-53 T 25-04-2016 IPR000160 GGDEF domain RJP_RS01730 574f7fd435d9a66172f0eb802b0fd9ae 450 SUPERFAMILY SSF52172 1 132 6.26E-39 T 25-04-2016 IPR011006 CheY-like superfamily RJP_RS01730 574f7fd435d9a66172f0eb802b0fd9ae 450 Gene3D G3DSA:3.30.70.270 291 448 9.7E-54 T 25-04-2016 RJP_RS01730 574f7fd435d9a66172f0eb802b0fd9ae 450 SMART SM00267 278 450 2.2E-54 T 25-04-2016 IPR000160 GGDEF domain RJP_RS01730 574f7fd435d9a66172f0eb802b0fd9ae 450 PANTHER PTHR24423 3 157 2.8E-38 T 25-04-2016 RJP_RS01730 574f7fd435d9a66172f0eb802b0fd9ae 450 Gene3D G3DSA:3.40.50.2300 2 128 4.0E-42 T 25-04-2016 RJP_RS01730 574f7fd435d9a66172f0eb802b0fd9ae 450 Gene3D G3DSA:3.40.50.2300 151 278 3.2E-16 T 25-04-2016 RJP_RS01730 574f7fd435d9a66172f0eb802b0fd9ae 450 SUPERFAMILY SSF55073 293 448 3.3E-48 T 25-04-2016 IPR029787 Nucleotide cyclase RJP_RS01730 574f7fd435d9a66172f0eb802b0fd9ae 450 SMART SM00448 2 115 7.3E-40 T 25-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 RJP_RS01730 574f7fd435d9a66172f0eb802b0fd9ae 450 SMART SM00448 152 264 0.02 T 25-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 RJP_RS01730 574f7fd435d9a66172f0eb802b0fd9ae 450 SUPERFAMILY SSF52172 149 281 2.42E-18 T 25-04-2016 IPR011006 CheY-like superfamily RJP_RS04755 e374a2ea2126f67420fd7db64f4a2db6 665 SUPERFAMILY SSF51246 335 450 2.04E-37 T 25-04-2016 IPR011054 Rudiment single hybrid motif RJP_RS04755 e374a2ea2126f67420fd7db64f4a2db6 665 Gene3D G3DSA:3.30.470.20 207 450 7.3E-97 T 25-04-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 RJP_RS04755 e374a2ea2126f67420fd7db64f4a2db6 665 SUPERFAMILY SSF51230 590 664 1.96E-17 T 25-04-2016 IPR011053 Single hybrid motif RJP_RS04755 e374a2ea2126f67420fd7db64f4a2db6 665 Pfam PF00364 Biotin-requiring enzyme 604 663 3.8E-14 T 25-04-2016 IPR000089 Biotin/lipoyl attachment RJP_RS04755 e374a2ea2126f67420fd7db64f4a2db6 665 Pfam PF02785 Biotin carboxylase C-terminal domain 340 447 1.7E-35 T 25-04-2016 IPR005482 Biotin carboxylase, C-terminal RJP_RS04755 e374a2ea2126f67420fd7db64f4a2db6 665 PANTHER PTHR18866:SF92 5 664 0.0 T 25-04-2016 RJP_RS04755 e374a2ea2126f67420fd7db64f4a2db6 665 Gene3D G3DSA:2.40.50.100 595 664 1.3E-21 T 25-04-2016 RJP_RS04755 e374a2ea2126f67420fd7db64f4a2db6 665 PANTHER PTHR18866 5 664 0.0 T 25-04-2016 RJP_RS04755 e374a2ea2126f67420fd7db64f4a2db6 665 SUPERFAMILY SSF56059 87 352 7.95E-70 T 25-04-2016 RJP_RS04755 e374a2ea2126f67420fd7db64f4a2db6 665 ProSitePatterns PS00188 Biotin-requiring enzymes attachment site. 621 638 - T 25-04-2016 IPR001882 Biotin-binding site RJP_RS04755 e374a2ea2126f67420fd7db64f4a2db6 665 Gene3D G3DSA:3.40.50.20 6 133 2.5E-48 T 25-04-2016 IPR016185 Pre-ATP-grasp domain RJP_RS04755 e374a2ea2126f67420fd7db64f4a2db6 665 Gene3D G3DSA:3.30.1490.20 134 205 3.3E-29 T 25-04-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 RJP_RS04755 e374a2ea2126f67420fd7db64f4a2db6 665 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 290 297 - T 25-04-2016 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 RJP_RS04755 e374a2ea2126f67420fd7db64f4a2db6 665 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 119 326 1.4E-78 T 25-04-2016 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 RJP_RS04755 e374a2ea2126f67420fd7db64f4a2db6 665 ProSitePatterns PS00866 Carbamoyl-phosphate synthase subdomain signature 1. 157 171 - T 25-04-2016 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 RJP_RS04755 e374a2ea2126f67420fd7db64f4a2db6 665 Pfam PF00289 Biotin carboxylase, N-terminal domain 6 113 6.0E-42 T 25-04-2016 IPR005481 Biotin carboxylase-like, N-terminal domain RJP_RS04755 e374a2ea2126f67420fd7db64f4a2db6 665 SUPERFAMILY SSF52440 4 117 1.44E-44 T 25-04-2016 IPR016185 Pre-ATP-grasp domain RJP_RS04755 e374a2ea2126f67420fd7db64f4a2db6 665 SMART SM00878 340 447 2.6E-53 T 25-04-2016 IPR005482 Biotin carboxylase, C-terminal RJP_RS02170 aeaf20e77184e240005dc0f6514daa78 886 Pfam PF05190 MutS family domain IV 451 542 1.4E-22 T 25-04-2016 IPR007861 DNA mismatch repair protein MutS, clamp GO:0005524|GO:0006298|GO:0030983 RJP_RS02170 aeaf20e77184e240005dc0f6514daa78 886 SUPERFAMILY SSF48334 286 590 4.58E-76 T 25-04-2016 IPR007696 DNA mismatch repair protein MutS, core GO:0005524|GO:0006298|GO:0030983 RJP_RS02170 aeaf20e77184e240005dc0f6514daa78 886 PANTHER PTHR11361 16 884 0.0 T 25-04-2016 RJP_RS02170 aeaf20e77184e240005dc0f6514daa78 886 Pfam PF01624 MutS domain I 16 133 3.8E-42 T 25-04-2016 IPR007695 DNA mismatch repair protein MutS-like, N-terminal GO:0005524|GO:0006298|GO:0030983 RJP_RS02170 aeaf20e77184e240005dc0f6514daa78 886 TIGRFAM TIGR01070 mutS1: DNA mismatch repair protein MutS 16 884 1.5E-261 T 25-04-2016 IPR005748 DNA mismatch repair protein MutS, type 1 GO:0005524|GO:0006298|GO:0030983 RJP_RS02170 aeaf20e77184e240005dc0f6514daa78 886 PIRSF PIRSF037677 9 871 6.5E-174 T 25-04-2016 RJP_RS02170 aeaf20e77184e240005dc0f6514daa78 886 Gene3D G3DSA:3.40.50.300 591 825 1.1E-82 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RJP_RS02170 aeaf20e77184e240005dc0f6514daa78 886 Hamap MF_00096 DNA mismatch repair protein MutS [mutS]. 15 878 23.158 T 25-04-2016 IPR005748 DNA mismatch repair protein MutS, type 1 GO:0005524|GO:0006298|GO:0030983 RJP_RS02170 aeaf20e77184e240005dc0f6514daa78 886 SUPERFAMILY SSF53150 131 298 7.19E-32 T 25-04-2016 IPR007860 DNA mismatch repair protein MutS, connector domain GO:0005524|GO:0006298|GO:0030983 RJP_RS02170 aeaf20e77184e240005dc0f6514daa78 886 SUPERFAMILY SSF52540 591 824 3.25E-59 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RJP_RS02170 aeaf20e77184e240005dc0f6514daa78 886 Pfam PF00488 MutS domain V 637 823 4.8E-84 T 25-04-2016 IPR000432 DNA mismatch repair protein MutS, C-terminal GO:0005524|GO:0006298|GO:0030983 RJP_RS02170 aeaf20e77184e240005dc0f6514daa78 886 Gene3D G3DSA:3.30.420.110 141 271 1.3E-27 T 25-04-2016 IPR007860 DNA mismatch repair protein MutS, connector domain GO:0005524|GO:0006298|GO:0030983 RJP_RS02170 aeaf20e77184e240005dc0f6514daa78 886 ProSitePatterns PS00486 DNA mismatch repair proteins mutS family signature. 715 731 - T 25-04-2016 IPR000432 DNA mismatch repair protein MutS, C-terminal GO:0005524|GO:0006298|GO:0030983 RJP_RS02170 aeaf20e77184e240005dc0f6514daa78 886 Pfam PF05192 MutS domain III 288 583 2.3E-37 T 25-04-2016 IPR007696 DNA mismatch repair protein MutS, core GO:0005524|GO:0006298|GO:0030983 RJP_RS02170 aeaf20e77184e240005dc0f6514daa78 886 Gene3D G3DSA:3.40.1170.10 10 134 4.4E-49 T 25-04-2016 IPR016151 DNA mismatch repair protein MutS, N-terminal GO:0005524|GO:0006298|GO:0030983 RJP_RS02170 aeaf20e77184e240005dc0f6514daa78 886 PANTHER PTHR11361:SF86 16 884 0.0 T 25-04-2016 RJP_RS02170 aeaf20e77184e240005dc0f6514daa78 886 Gene3D G3DSA:1.10.1420.10 282 491 2.1E-47 T 25-04-2016 RJP_RS02170 aeaf20e77184e240005dc0f6514daa78 886 SMART SM00533 302 615 9.9E-107 T 25-04-2016 IPR007696 DNA mismatch repair protein MutS, core GO:0005524|GO:0006298|GO:0030983 RJP_RS02170 aeaf20e77184e240005dc0f6514daa78 886 Pfam PF05188 MutS domain II 142 272 3.0E-25 T 25-04-2016 IPR007860 DNA mismatch repair protein MutS, connector domain GO:0005524|GO:0006298|GO:0030983 RJP_RS02170 aeaf20e77184e240005dc0f6514daa78 886 SMART SM00534 634 821 3.5E-120 T 25-04-2016 IPR000432 DNA mismatch repair protein MutS, C-terminal GO:0005524|GO:0006298|GO:0030983 RJP_RS02170 aeaf20e77184e240005dc0f6514daa78 886 SUPERFAMILY SSF55271 15 129 1.05E-39 T 25-04-2016 IPR016151 DNA mismatch repair protein MutS, N-terminal GO:0005524|GO:0006298|GO:0030983 RJP_RS03495 226dff7811b43353b783a79a7343825f 748 SUPERFAMILY SSF54211 2 144 1.32E-44 T 25-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold RJP_RS03495 226dff7811b43353b783a79a7343825f 748 SUPERFAMILY SSF55666 149 235 1.23E-24 T 25-04-2016 IPR015847 Exoribonuclease, phosphorolytic domain 2 Reactome: REACT_21257 RJP_RS03495 226dff7811b43353b783a79a7343825f 748 SUPERFAMILY SSF50249 621 698 7.92E-18 T 25-04-2016 IPR012340 Nucleic acid-binding, OB-fold RJP_RS03495 226dff7811b43353b783a79a7343825f 748 Pfam PF01138 3' exoribonuclease family, domain 1 16 140 7.3E-17 T 25-04-2016 IPR001247 Exoribonuclease, phosphorolytic domain 1 Reactome: REACT_21257 RJP_RS03495 226dff7811b43353b783a79a7343825f 748 Pfam PF01138 3' exoribonuclease family, domain 1 325 457 1.4E-18 T 25-04-2016 IPR001247 Exoribonuclease, phosphorolytic domain 1 Reactome: REACT_21257 RJP_RS03495 226dff7811b43353b783a79a7343825f 748 PIRSF PIRSF005499 1 727 1.4E-294 T 25-04-2016 IPR012162 Polyribonucleotide nucleotidyltransferase GO:0003723|GO:0004654|GO:0006402 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 RJP_RS03495 226dff7811b43353b783a79a7343825f 748 SMART SM00322 553 618 1.2E-13 T 25-04-2016 IPR004087 K Homology domain GO:0003676 RJP_RS03495 226dff7811b43353b783a79a7343825f 748 SUPERFAMILY SSF46915 238 321 8.11E-15 T 25-04-2016 IPR015848 Polyribonucleotide nucleotidyltransferase, RNA-binding domain GO:0000175|GO:0003723|GO:0006396 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 RJP_RS03495 226dff7811b43353b783a79a7343825f 748 Gene3D G3DSA:3.30.230.70 3 225 2.9E-73 T 25-04-2016 IPR027408 PNPase/RNase PH domain RJP_RS03495 226dff7811b43353b783a79a7343825f 748 Gene3D G3DSA:3.30.230.70 314 544 4.4E-83 T 25-04-2016 IPR027408 PNPase/RNase PH domain RJP_RS03495 226dff7811b43353b783a79a7343825f 748 Gene3D G3DSA:1.10.10.400 238 313 4.5E-18 T 25-04-2016 IPR015848 Polyribonucleotide nucleotidyltransferase, RNA-binding domain GO:0000175|GO:0003723|GO:0006396 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 RJP_RS03495 226dff7811b43353b783a79a7343825f 748 SUPERFAMILY SSF55666 451 550 1.4E-27 T 25-04-2016 IPR015847 Exoribonuclease, phosphorolytic domain 2 Reactome: REACT_21257 RJP_RS03495 226dff7811b43353b783a79a7343825f 748 PANTHER PTHR11252 1 744 0.0 T 25-04-2016 IPR012162 Polyribonucleotide nucleotidyltransferase GO:0003723|GO:0004654|GO:0006402 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 RJP_RS03495 226dff7811b43353b783a79a7343825f 748 PANTHER PTHR11252:SF0 1 744 0.0 T 25-04-2016 RJP_RS03495 226dff7811b43353b783a79a7343825f 748 Pfam PF03725 3' exoribonuclease family, domain 2 148 210 2.3E-13 T 25-04-2016 IPR015847 Exoribonuclease, phosphorolytic domain 2 Reactome: REACT_21257 RJP_RS03495 226dff7811b43353b783a79a7343825f 748 SUPERFAMILY SSF54211 296 488 5.57E-43 T 25-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold RJP_RS03495 226dff7811b43353b783a79a7343825f 748 Gene3D G3DSA:3.30.1370.10 553 620 5.1E-23 T 25-04-2016 IPR004088 K Homology domain, type 1 GO:0003723 RJP_RS03495 226dff7811b43353b783a79a7343825f 748 Gene3D G3DSA:2.40.50.140 621 695 2.5E-19 T 25-04-2016 IPR012340 Nucleic acid-binding, OB-fold RJP_RS03495 226dff7811b43353b783a79a7343825f 748 Hamap MF_01595 Polyribonucleotide nucleotidyltransferase [pnp]. 3 694 29.001 T 25-04-2016 IPR012162 Polyribonucleotide nucleotidyltransferase GO:0003723|GO:0004654|GO:0006402 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 RJP_RS03495 226dff7811b43353b783a79a7343825f 748 TIGRFAM TIGR03591 polynuc_phos: polyribonucleotide nucleotidyltransferase 11 692 6.7E-304 T 25-04-2016 IPR012162 Polyribonucleotide nucleotidyltransferase GO:0003723|GO:0004654|GO:0006402 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 RJP_RS03495 226dff7811b43353b783a79a7343825f 748 Pfam PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain 241 321 3.0E-21 T 25-04-2016 IPR015848 Polyribonucleotide nucleotidyltransferase, RNA-binding domain GO:0000175|GO:0003723|GO:0006396 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 RJP_RS03495 226dff7811b43353b783a79a7343825f 748 SUPERFAMILY SSF54791 556 641 2.09E-20 T 25-04-2016 IPR004088 K Homology domain, type 1 GO:0003723 RJP_RS03495 226dff7811b43353b783a79a7343825f 748 Pfam PF00013 KH domain 556 614 7.1E-12 T 25-04-2016 IPR004088 K Homology domain, type 1 GO:0003723 RJP_RS03495 226dff7811b43353b783a79a7343825f 748 SMART SM00316 621 691 2.0E-19 T 25-04-2016 IPR022967 RNA-binding domain, S1 RJP_RS03495 226dff7811b43353b783a79a7343825f 748 Pfam PF00575 S1 RNA binding domain 619 691 1.6E-14 T 25-04-2016 IPR003029 S1 domain GO:0003676 RJP_RS02605 89565303a06b9fda7ed129f7b17dada5 242 SUPERFAMILY SSF143243 16 66 1.22E-48 T 25-04-2016 RJP_RS02605 89565303a06b9fda7ed129f7b17dada5 242 SUPERFAMILY SSF143243 98 218 1.22E-48 T 25-04-2016 RJP_RS02605 89565303a06b9fda7ed129f7b17dada5 242 PANTHER PTHR10884 100 235 2.3E-63 T 25-04-2016 RJP_RS02605 89565303a06b9fda7ed129f7b17dada5 242 PANTHER PTHR10884 3 64 2.3E-63 T 25-04-2016 RJP_RS02605 89565303a06b9fda7ed129f7b17dada5 242 ProDom PD001581 OXIDOREDUCTASE SUBUNIT NADH DEHYDROGENASE CHAIN C NAD DEHYDROGENASE UBIQUINONE F420H2 116 171 4.0E-27 T 25-04-2016 IPR001268 NADH:ubiquinone oxidoreductase, 30kDa subunit GO:0008137|GO:0055114 RJP_RS02605 89565303a06b9fda7ed129f7b17dada5 242 Hamap MF_01357 NAD(P)H-quinone oxidoreductase subunit J, chloroplastic [ndhJ]. 6 192 29.255 T 25-04-2016 IPR010218 NADH dehydrogenase, subunit C GO:0016651|GO:0055114 RJP_RS02605 89565303a06b9fda7ed129f7b17dada5 242 PANTHER PTHR10884:SF6 100 235 2.3E-63 T 25-04-2016 RJP_RS02605 89565303a06b9fda7ed129f7b17dada5 242 PANTHER PTHR10884:SF6 3 64 2.3E-63 T 25-04-2016 RJP_RS02605 89565303a06b9fda7ed129f7b17dada5 242 Pfam PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit 31 185 2.0E-37 T 25-04-2016 IPR001268 NADH:ubiquinone oxidoreductase, 30kDa subunit GO:0008137|GO:0055114 RJP_RS02605 89565303a06b9fda7ed129f7b17dada5 242 TIGRFAM TIGR03774 RPE2: rickettsial palindromic element RPE2 domain 67 101 7.1E-22 T 25-04-2016 IPR022436 Rickettsia palindromic element RPE2 RJP_RS01560 c4e2d1e7a3c360cc8b039d58227e4596 80 SUPERFAMILY SSF143120 1 77 1.44E-19 T 25-04-2016 RJP_RS01560 c4e2d1e7a3c360cc8b039d58227e4596 80 PANTHER PTHR33713:SF6 1 69 3.0E-14 T 25-04-2016 RJP_RS01560 c4e2d1e7a3c360cc8b039d58227e4596 80 Pfam PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system 1 69 2.7E-14 T 25-04-2016 IPR006442 Type II toxin-antitoxin system, antitoxin Phd/YefM RJP_RS01560 c4e2d1e7a3c360cc8b039d58227e4596 80 PANTHER PTHR33713 1 69 3.0E-14 T 25-04-2016 RJP_RS01560 c4e2d1e7a3c360cc8b039d58227e4596 80 TIGRFAM TIGR01552 phd_fam: prevent-host-death family protein 7 54 5.3E-6 T 25-04-2016 IPR006442 Type II toxin-antitoxin system, antitoxin Phd/YefM RJP_RS05355 5d498f8b3e89c48d514629f7cf42fc62 447 Pfam PF01926 50S ribosome-binding GTPase 6 120 5.2E-25 T 25-04-2016 IPR006073 GTP binding domain GO:0005525 RJP_RS05355 5d498f8b3e89c48d514629f7cf42fc62 447 Pfam PF01926 50S ribosome-binding GTPase 182 299 7.1E-20 T 25-04-2016 IPR006073 GTP binding domain GO:0005525 RJP_RS05355 5d498f8b3e89c48d514629f7cf42fc62 447 PANTHER PTHR11649:SF68 5 440 5.6E-216 T 25-04-2016 RJP_RS05355 5d498f8b3e89c48d514629f7cf42fc62 447 SUPERFAMILY SSF52540 6 167 8.59E-44 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RJP_RS05355 5d498f8b3e89c48d514629f7cf42fc62 447 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 179 347 5.1E-22 T 25-04-2016 IPR005225 Small GTP-binding protein domain GO:0005525 RJP_RS05355 5d498f8b3e89c48d514629f7cf42fc62 447 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 2 157 2.0E-27 T 25-04-2016 IPR005225 Small GTP-binding protein domain GO:0005525 RJP_RS05355 5d498f8b3e89c48d514629f7cf42fc62 447 Pfam PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal 359 438 3.4E-29 T 25-04-2016 IPR032859 GTPase Der, C-terminal KH-domain-like RJP_RS05355 5d498f8b3e89c48d514629f7cf42fc62 447 TIGRFAM TIGR03594 GTPase_EngA: ribosome-associated GTPase EngA 5 438 1.1E-156 T 25-04-2016 IPR016484 GTP-binding protein EngA GO:0005525 RJP_RS05355 5d498f8b3e89c48d514629f7cf42fc62 447 Hamap MF_00195 GTPase Der [der]. 3 443 35.155 T 25-04-2016 IPR016484 GTP-binding protein EngA GO:0005525 RJP_RS05355 5d498f8b3e89c48d514629f7cf42fc62 447 Gene3D G3DSA:3.40.50.300 6 166 1.7E-42 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RJP_RS05355 5d498f8b3e89c48d514629f7cf42fc62 447 Gene3D G3DSA:3.40.50.300 178 363 3.7E-46 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RJP_RS05355 5d498f8b3e89c48d514629f7cf42fc62 447 PANTHER PTHR11649 5 440 5.6E-216 T 25-04-2016 RJP_RS05355 5d498f8b3e89c48d514629f7cf42fc62 447 SUPERFAMILY SSF52540 137 446 8.07E-56 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RJP_RS05355 5d498f8b3e89c48d514629f7cf42fc62 447 Gene3D G3DSA:3.30.300.20 364 441 9.1E-31 T 25-04-2016 IPR015946 K homology domain-like, alpha/beta RJP_RS05355 5d498f8b3e89c48d514629f7cf42fc62 447 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 6 26 3.2E-5 T 25-04-2016 IPR006073 GTP binding domain GO:0005525 RJP_RS05355 5d498f8b3e89c48d514629f7cf42fc62 447 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 55 70 3.2E-5 T 25-04-2016 IPR006073 GTP binding domain GO:0005525 RJP_RS05355 5d498f8b3e89c48d514629f7cf42fc62 447 PIRSF PIRSF006485 2 447 1.6E-159 T 25-04-2016 IPR016484 GTP-binding protein EngA GO:0005525 RJP_RS05625 be60239541ac14392287b1037133d1da 1656 SUPERFAMILY SSF103515 1368 1656 8.11E-46 T 25-04-2016 IPR005546 Autotransporter beta-domain RJP_RS05625 be60239541ac14392287b1037133d1da 1656 SUPERFAMILY SSF103515 1316 1339 8.11E-46 T 25-04-2016 IPR005546 Autotransporter beta-domain RJP_RS05625 be60239541ac14392287b1037133d1da 1656 Pfam PF12334 Rickettsia outer membrane protein B 704 926 6.1E-80 T 25-04-2016 IPR022095 Rickettsia outer membrane protein B RJP_RS05625 be60239541ac14392287b1037133d1da 1656 SMART SM00869 1372 1646 7.0E-36 T 25-04-2016 IPR005546 Autotransporter beta-domain RJP_RS05625 be60239541ac14392287b1037133d1da 1656 TIGRFAM TIGR01414 autotrans_barl: outer membrane autotransporter barrel domain 1218 1656 9.9E-73 T 25-04-2016 IPR006315 Outer membrane autotransporter barrel GO:0019867 RJP_RS05625 be60239541ac14392287b1037133d1da 1656 Pfam PF03797 Autotransporter beta-domain 1372 1647 2.4E-28 T 25-04-2016 IPR005546 Autotransporter beta-domain RJP_RS05625 be60239541ac14392287b1037133d1da 1656 Gene3D G3DSA:2.40.128.130 1324 1656 2.9E-36 T 25-04-2016 IPR005546 Autotransporter beta-domain RJP_RS01255 506b25e5b9ffc7db5f1861a49e284a77 496 SUPERFAMILY SSF55486 3 496 2.71E-112 T 25-04-2016 RJP_RS01255 506b25e5b9ffc7db5f1861a49e284a77 496 PANTHER PTHR34217:SF1 1 496 2.5E-189 T 25-04-2016 RJP_RS01255 506b25e5b9ffc7db5f1861a49e284a77 496 Pfam PF02074 Carboxypeptidase Taq (M32) metallopeptidase 13 495 6.3E-86 T 25-04-2016 IPR001333 Peptidase M32, carboxypeptidase Taq metallopeptidase GO:0004181|GO:0006508 RJP_RS01255 506b25e5b9ffc7db5f1861a49e284a77 496 PRINTS PR00998 Carboxypeptidase Taq (M32) metallopeptidase signature 401 422 1.3E-45 T 25-04-2016 IPR001333 Peptidase M32, carboxypeptidase Taq metallopeptidase GO:0004181|GO:0006508 RJP_RS01255 506b25e5b9ffc7db5f1861a49e284a77 496 PRINTS PR00998 Carboxypeptidase Taq (M32) metallopeptidase signature 378 395 1.3E-45 T 25-04-2016 IPR001333 Peptidase M32, carboxypeptidase Taq metallopeptidase GO:0004181|GO:0006508 RJP_RS01255 506b25e5b9ffc7db5f1861a49e284a77 496 PRINTS PR00998 Carboxypeptidase Taq (M32) metallopeptidase signature 244 263 1.3E-45 T 25-04-2016 IPR001333 Peptidase M32, carboxypeptidase Taq metallopeptidase GO:0004181|GO:0006508 RJP_RS01255 506b25e5b9ffc7db5f1861a49e284a77 496 PRINTS PR00998 Carboxypeptidase Taq (M32) metallopeptidase signature 446 464 1.3E-45 T 25-04-2016 IPR001333 Peptidase M32, carboxypeptidase Taq metallopeptidase GO:0004181|GO:0006508 RJP_RS01255 506b25e5b9ffc7db5f1861a49e284a77 496 PRINTS PR00998 Carboxypeptidase Taq (M32) metallopeptidase signature 332 351 1.3E-45 T 25-04-2016 IPR001333 Peptidase M32, carboxypeptidase Taq metallopeptidase GO:0004181|GO:0006508 RJP_RS01255 506b25e5b9ffc7db5f1861a49e284a77 496 PRINTS PR00998 Carboxypeptidase Taq (M32) metallopeptidase signature 148 168 1.3E-45 T 25-04-2016 IPR001333 Peptidase M32, carboxypeptidase Taq metallopeptidase GO:0004181|GO:0006508 RJP_RS01255 506b25e5b9ffc7db5f1861a49e284a77 496 PRINTS PR00998 Carboxypeptidase Taq (M32) metallopeptidase signature 264 283 1.3E-45 T 25-04-2016 IPR001333 Peptidase M32, carboxypeptidase Taq metallopeptidase GO:0004181|GO:0006508 RJP_RS01255 506b25e5b9ffc7db5f1861a49e284a77 496 PRINTS PR00998 Carboxypeptidase Taq (M32) metallopeptidase signature 291 307 1.3E-45 T 25-04-2016 IPR001333 Peptidase M32, carboxypeptidase Taq metallopeptidase GO:0004181|GO:0006508 RJP_RS01255 506b25e5b9ffc7db5f1861a49e284a77 496 PIRSF PIRSF006615 1 496 1.0E-192 T 25-04-2016 IPR001333 Peptidase M32, carboxypeptidase Taq metallopeptidase GO:0004181|GO:0006508 RJP_RS01255 506b25e5b9ffc7db5f1861a49e284a77 496 PANTHER PTHR34217 1 496 2.5E-189 T 25-04-2016 RJP_RS06145 246b765f80d3482147c535579f3c33fc 875 SMART SM00475 3 260 2.0E-136 T 25-04-2016 IPR002421 5'-3' exonuclease, N-terminal GO:0003677 RJP_RS06145 246b765f80d3482147c535579f3c33fc 875 PANTHER PTHR10133 2 874 4.6E-293 T 25-04-2016 RJP_RS06145 246b765f80d3482147c535579f3c33fc 875 Gene3D G3DSA:3.30.420.10 304 489 6.2E-5 T 25-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 RJP_RS06145 246b765f80d3482147c535579f3c33fc 875 Gene3D G3DSA:3.40.50.1010 5 183 9.4E-67 T 25-04-2016 IPR029060 PIN domain-like RJP_RS06145 246b765f80d3482147c535579f3c33fc 875 SUPERFAMILY SSF88723 3 168 6.45E-58 T 25-04-2016 IPR029060 PIN domain-like RJP_RS06145 246b765f80d3482147c535579f3c33fc 875 PRINTS PR00868 DNA-polymerase family A (pol I) signature 703 728 3.3E-71 T 25-04-2016 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 RJP_RS06145 246b765f80d3482147c535579f3c33fc 875 PRINTS PR00868 DNA-polymerase family A (pol I) signature 649 672 3.3E-71 T 25-04-2016 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 RJP_RS06145 246b765f80d3482147c535579f3c33fc 875 PRINTS PR00868 DNA-polymerase family A (pol I) signature 792 808 3.3E-71 T 25-04-2016 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 RJP_RS06145 246b765f80d3482147c535579f3c33fc 875 PRINTS PR00868 DNA-polymerase family A (pol I) signature 679 692 3.3E-71 T 25-04-2016 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 RJP_RS06145 246b765f80d3482147c535579f3c33fc 875 PRINTS PR00868 DNA-polymerase family A (pol I) signature 822 835 3.3E-71 T 25-04-2016 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 RJP_RS06145 246b765f80d3482147c535579f3c33fc 875 PRINTS PR00868 DNA-polymerase family A (pol I) signature 762 773 3.3E-71 T 25-04-2016 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 RJP_RS06145 246b765f80d3482147c535579f3c33fc 875 PRINTS PR00868 DNA-polymerase family A (pol I) signature 604 626 3.3E-71 T 25-04-2016 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 RJP_RS06145 246b765f80d3482147c535579f3c33fc 875 PRINTS PR00868 DNA-polymerase family A (pol I) signature 627 642 3.3E-71 T 25-04-2016 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 RJP_RS06145 246b765f80d3482147c535579f3c33fc 875 PRINTS PR00868 DNA-polymerase family A (pol I) signature 740 751 3.3E-71 T 25-04-2016 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 RJP_RS06145 246b765f80d3482147c535579f3c33fc 875 TIGRFAM TIGR00593 pola: DNA polymerase I 7 875 0.0 T 25-04-2016 IPR018320 DNA polymerase 1 GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 RJP_RS06145 246b765f80d3482147c535579f3c33fc 875 SMART SM00279 171 206 2.9E-11 T 25-04-2016 IPR008918 Helix-hairpin-helix motif, class 2 GO:0003677|GO:0003824 RJP_RS06145 246b765f80d3482147c535579f3c33fc 875 SUPERFAMILY SSF47807 172 284 3.29E-28 T 25-04-2016 IPR020045 5'-3' exonuclease, C-terminal domain GO:0003677|GO:0003824 RJP_RS06145 246b765f80d3482147c535579f3c33fc 875 Gene3D G3DSA:3.30.70.370 767 875 5.3E-63 T 25-04-2016 RJP_RS06145 246b765f80d3482147c535579f3c33fc 875 Gene3D G3DSA:3.30.70.370 613 660 5.3E-63 T 25-04-2016 RJP_RS06145 246b765f80d3482147c535579f3c33fc 875 Gene3D G3DSA:1.10.150.20 184 244 2.9E-22 T 25-04-2016 RJP_RS06145 246b765f80d3482147c535579f3c33fc 875 ProSitePatterns PS00447 DNA polymerase family A signature. 703 722 - T 25-04-2016 IPR019760 DNA-directed DNA polymerase, family A, conserved site GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 RJP_RS06145 246b765f80d3482147c535579f3c33fc 875 Gene3D G3DSA:1.20.1060.10 491 612 1.6E-33 T 25-04-2016 RJP_RS06145 246b765f80d3482147c535579f3c33fc 875 Pfam PF01367 5'-3' exonuclease, C-terminal SAM fold 172 264 3.9E-25 T 25-04-2016 IPR020045 5'-3' exonuclease, C-terminal domain GO:0003677|GO:0003824 RJP_RS06145 246b765f80d3482147c535579f3c33fc 875 Pfam PF02739 5'-3' exonuclease, N-terminal resolvase-like domain 7 168 3.1E-55 T 25-04-2016 IPR020046 5'-3' exonuclease, alpha-helical arch, N-terminal GO:0003677 RJP_RS06145 246b765f80d3482147c535579f3c33fc 875 Gene3D G3DSA:1.10.150.20 661 766 1.7E-30 T 25-04-2016 RJP_RS06145 246b765f80d3482147c535579f3c33fc 875 SUPERFAMILY SSF56672 472 875 1.67E-139 T 25-04-2016 RJP_RS06145 246b765f80d3482147c535579f3c33fc 875 SMART SM00482 635 839 3.9E-114 T 25-04-2016 IPR001098 DNA-directed DNA polymerase, family A, palm domain GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 RJP_RS06145 246b765f80d3482147c535579f3c33fc 875 Pfam PF00476 DNA polymerase family A 497 873 6.9E-142 T 25-04-2016 IPR001098 DNA-directed DNA polymerase, family A, palm domain GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 RJP_RS06145 246b765f80d3482147c535579f3c33fc 875 PANTHER PTHR10133:SF27 2 874 4.6E-293 T 25-04-2016 RJP_RS00180 a22d3531ded658a75e88c083698e5e04 74 Gene3D G3DSA:1.20.20.10 7 73 1.6E-20 T 25-04-2016 IPR000454 ATPase, F0 complex, subunit C GO:0015078|GO:0015986|GO:0045263 RJP_RS00180 a22d3531ded658a75e88c083698e5e04 74 SUPERFAMILY SSF81333 4 73 2.48E-17 T 25-04-2016 IPR002379 V-ATPase proteolipid subunit C-like domain GO:0015078|GO:0015991|GO:0033177 RJP_RS00180 a22d3531ded658a75e88c083698e5e04 74 Pfam PF00137 ATP synthase subunit C 9 71 4.5E-11 T 25-04-2016 IPR002379 V-ATPase proteolipid subunit C-like domain GO:0015078|GO:0015991|GO:0033177 RJP_RS00180 a22d3531ded658a75e88c083698e5e04 74 PRINTS PR00124 ATP synthase C subunit signature 9 28 4.0E-19 T 25-04-2016 IPR000454 ATPase, F0 complex, subunit C GO:0015078|GO:0015986|GO:0045263 RJP_RS00180 a22d3531ded658a75e88c083698e5e04 74 PRINTS PR00124 ATP synthase C subunit signature 47 72 4.0E-19 T 25-04-2016 IPR000454 ATPase, F0 complex, subunit C GO:0015078|GO:0015986|GO:0045263 RJP_RS00180 a22d3531ded658a75e88c083698e5e04 74 PRINTS PR00124 ATP synthase C subunit signature 30 45 4.0E-19 T 25-04-2016 IPR000454 ATPase, F0 complex, subunit C GO:0015078|GO:0015986|GO:0045263 RJP_RS00180 a22d3531ded658a75e88c083698e5e04 74 PANTHER PTHR10031 1 73 1.5E-17 T 25-04-2016 RJP_RS00180 a22d3531ded658a75e88c083698e5e04 74 ProSitePatterns PS00605 ATP synthase c subunit signature. 37 58 - T 25-04-2016 IPR020537 ATPase, F0 complex, subunit C, DCCD-binding site RJP_RS00180 a22d3531ded658a75e88c083698e5e04 74 Hamap MF_01396 ATP synthase subunit c [atpH]. 7 74 13.546 T 25-04-2016 RJP_RS04740 405f1c0c29e86f608bb5e8ba04348402 1140 Gene3D G3DSA:1.20.1250.20 6 198 3.0E-9 T 25-04-2016 RJP_RS04740 405f1c0c29e86f608bb5e8ba04348402 1140 Gene3D G3DSA:1.20.1250.20 223 425 1.8E-10 T 25-04-2016 RJP_RS04740 405f1c0c29e86f608bb5e8ba04348402 1140 PANTHER PTHR24096:SF177 557 1140 7.8E-295 T 25-04-2016 RJP_RS04740 405f1c0c29e86f608bb5e8ba04348402 1140 SUPERFAMILY SSF103473 23 427 2.35E-26 T 25-04-2016 IPR020846 Major facilitator superfamily domain RJP_RS04740 405f1c0c29e86f608bb5e8ba04348402 1140 SUPERFAMILY SSF69593 395 629 1.96E-28 T 25-04-2016 RJP_RS04740 405f1c0c29e86f608bb5e8ba04348402 1140 SUPERFAMILY SSF56801 621 1135 4.19E-90 T 25-04-2016 RJP_RS04740 405f1c0c29e86f608bb5e8ba04348402 1140 SMART SM00563 463 573 4.2E-29 T 25-04-2016 IPR002123 Phospholipid/glycerol acyltransferase GO:0008152|GO:0016746 RJP_RS04740 405f1c0c29e86f608bb5e8ba04348402 1140 Gene3D G3DSA:2.30.38.10 973 1038 2.0E-11 T 25-04-2016 RJP_RS04740 405f1c0c29e86f608bb5e8ba04348402 1140 Gene3D G3DSA:3.40.1130.10 450 620 4.8E-14 T 25-04-2016 RJP_RS04740 405f1c0c29e86f608bb5e8ba04348402 1140 Gene3D G3DSA:3.30.300.30 1041 1133 7.1E-4 T 25-04-2016 RJP_RS04740 405f1c0c29e86f608bb5e8ba04348402 1140 PANTHER PTHR24096 557 1140 7.8E-295 T 25-04-2016 RJP_RS04740 405f1c0c29e86f608bb5e8ba04348402 1140 ProSitePatterns PS00455 Putative AMP-binding domain signature. 810 821 - T 25-04-2016 IPR020845 AMP-binding, conserved site RJP_RS04740 405f1c0c29e86f608bb5e8ba04348402 1140 Pfam PF00501 AMP-binding enzyme 659 1045 4.0E-64 T 25-04-2016 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 RJP_RS04740 405f1c0c29e86f608bb5e8ba04348402 1140 Pfam PF07690 Major Facilitator Superfamily 20 311 5.8E-14 T 25-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 RJP_RS04740 405f1c0c29e86f608bb5e8ba04348402 1140 Gene3D G3DSA:3.40.50.980 817 972 1.1E-34 T 25-04-2016 RJP_RS04740 405f1c0c29e86f608bb5e8ba04348402 1140 Pfam PF01553 Acyltransferase 447 570 9.8E-18 T 25-04-2016 IPR002123 Phospholipid/glycerol acyltransferase GO:0008152|GO:0016746 RJP_RS04740 405f1c0c29e86f608bb5e8ba04348402 1140 Gene3D G3DSA:3.40.50.980 641 816 7.7E-19 T 25-04-2016 RJP_RS06925 1bcdacb92ed341cf4c124b6d6ce44258 56 Pfam PF00471 Ribosomal protein L33 9 54 1.6E-13 T 25-04-2016 IPR001705 Ribosomal protein L33 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RJP_RS06925 1bcdacb92ed341cf4c124b6d6ce44258 56 SUPERFAMILY SSF57829 3 54 3.17E-15 T 25-04-2016 IPR011332 Zinc-binding ribosomal protein GO:0006412 RJP_RS06925 1bcdacb92ed341cf4c124b6d6ce44258 56 PANTHER PTHR15238 1 56 1.1E-20 T 25-04-2016 RJP_RS06925 1bcdacb92ed341cf4c124b6d6ce44258 56 TIGRFAM TIGR01023 rpmG_bact: ribosomal protein bL33 1 56 2.1E-25 T 25-04-2016 IPR001705 Ribosomal protein L33 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RJP_RS06925 1bcdacb92ed341cf4c124b6d6ce44258 56 Hamap MF_00294 50S ribosomal protein L33 [rpmG]. 2 54 12.26 T 25-04-2016 IPR001705 Ribosomal protein L33 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RJP_RS06925 1bcdacb92ed341cf4c124b6d6ce44258 56 PANTHER PTHR15238:SF1 1 56 1.1E-20 T 25-04-2016 RJP_RS06925 1bcdacb92ed341cf4c124b6d6ce44258 56 ProSitePatterns PS00582 Ribosomal protein L33 signature. 22 41 - T 25-04-2016 IPR018264 Ribosomal protein L33, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 RJP_RS05215 3517365813fc5b65f9e7c5e73f1e7f69 273 Gene3D G3DSA:4.10.950.10 196 272 1.1E-35 T 25-04-2016 IPR014726 Ribosomal protein L2, domain 3 RJP_RS05215 3517365813fc5b65f9e7c5e73f1e7f69 273 ProSitePatterns PS00467 Ribosomal protein L2 signature. 218 229 - T 25-04-2016 IPR022671 Ribosomal protein L2, conserved site GO:0003735|GO:0005840|GO:0006412 RJP_RS05215 3517365813fc5b65f9e7c5e73f1e7f69 273 PIRSF PIRSF002158 4 273 3.3E-105 T 25-04-2016 IPR002171 Ribosomal protein L2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RJP_RS05215 3517365813fc5b65f9e7c5e73f1e7f69 273 Pfam PF03947 Ribosomal Proteins L2, C-terminal domain 125 250 1.2E-56 T 25-04-2016 IPR022669 Ribosomal protein L2, C-terminal GO:0003735|GO:0005840|GO:0006412 RJP_RS05215 3517365813fc5b65f9e7c5e73f1e7f69 273 SUPERFAMILY SSF50249 2 125 9.94E-50 T 25-04-2016 IPR012340 Nucleic acid-binding, OB-fold RJP_RS05215 3517365813fc5b65f9e7c5e73f1e7f69 273 TIGRFAM TIGR01171 rplB_bact: ribosomal protein uL2 3 273 1.7E-131 T 25-04-2016 IPR005880 Ribosomal protein L2, bacterial/organellar-type GO:0003723|GO:0003735|GO:0006412|GO:0015934|GO:0016740 RJP_RS05215 3517365813fc5b65f9e7c5e73f1e7f69 273 SUPERFAMILY SSF50104 126 272 3.37E-61 T 25-04-2016 IPR008991 Translation protein SH3-like domain RJP_RS05215 3517365813fc5b65f9e7c5e73f1e7f69 273 Gene3D G3DSA:2.40.50.140 1 114 8.9E-53 T 25-04-2016 IPR012340 Nucleic acid-binding, OB-fold RJP_RS05215 3517365813fc5b65f9e7c5e73f1e7f69 273 Hamap MF_01320_B 50S ribosomal protein L2 [rplB]. 1 273 46.783 T 25-04-2016 IPR005880 Ribosomal protein L2, bacterial/organellar-type GO:0003723|GO:0003735|GO:0006412|GO:0015934|GO:0016740 RJP_RS05215 3517365813fc5b65f9e7c5e73f1e7f69 273 SMART SM01383 42 118 5.7E-48 T 25-04-2016 IPR002171 Ribosomal protein L2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RJP_RS05215 3517365813fc5b65f9e7c5e73f1e7f69 273 Pfam PF00181 Ribosomal Proteins L2, RNA binding domain 42 118 1.0E-34 T 25-04-2016 IPR022666 Ribosomal Proteins L2, RNA binding domain GO:0003735|GO:0005622|GO:0005840|GO:0006412 RJP_RS05215 3517365813fc5b65f9e7c5e73f1e7f69 273 PANTHER PTHR13691 1 273 7.9E-144 T 25-04-2016 IPR002171 Ribosomal protein L2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RJP_RS05215 3517365813fc5b65f9e7c5e73f1e7f69 273 Gene3D G3DSA:2.30.30.30 120 194 1.1E-30 T 25-04-2016 IPR014722 Ribosomal protein L2 domain 2 RJP_RS05215 3517365813fc5b65f9e7c5e73f1e7f69 273 SMART SM01382 124 252 2.5E-89 T 25-04-2016 IPR022669 Ribosomal protein L2, C-terminal GO:0003735|GO:0005840|GO:0006412 RJP_RS06045 844af4dae47fb10e7c939da16daa5261 343 TIGRFAM TIGR02012 tigrfam_recA: protein RecA 5 325 4.4E-171 T 25-04-2016 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 RJP_RS06045 844af4dae47fb10e7c939da16daa5261 343 SUPERFAMILY SSF52540 6 268 4.67E-66 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RJP_RS06045 844af4dae47fb10e7c939da16daa5261 343 Pfam PF00154 recA bacterial DNA recombination protein 8 269 5.3E-145 T 25-04-2016 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 RJP_RS06045 844af4dae47fb10e7c939da16daa5261 343 Gene3D G3DSA:3.30.250.10 269 326 4.8E-29 T 25-04-2016 IPR023400 DNA recombination and repair protein RecA, C-terminal RJP_RS06045 844af4dae47fb10e7c939da16daa5261 343 PANTHER PTHR22942 6 336 3.7E-200 T 25-04-2016 RJP_RS06045 844af4dae47fb10e7c939da16daa5261 343 SMART SM00382 58 229 6.0E-12 T 25-04-2016 IPR003593 AAA+ ATPase domain RJP_RS06045 844af4dae47fb10e7c939da16daa5261 343 Hamap MF_00268 Protein RecA [recA]. 6 330 51.296 T 25-04-2016 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 RJP_RS06045 844af4dae47fb10e7c939da16daa5261 343 PANTHER PTHR22942:SF1 6 336 3.7E-200 T 25-04-2016 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 RJP_RS06045 844af4dae47fb10e7c939da16daa5261 343 Gene3D G3DSA:3.40.50.300 29 268 4.8E-83 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RJP_RS06045 844af4dae47fb10e7c939da16daa5261 343 ProSitePatterns PS00321 recA signature. 214 222 - T 25-04-2016 IPR020584 DNA recombination/repair protein RecA, conserved site GO:0003677|GO:0005524|GO:0006259|GO:0008094 RJP_RS06045 844af4dae47fb10e7c939da16daa5261 343 PRINTS PR00142 RecA protein signature 298 315 2.0E-85 T 25-04-2016 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 RJP_RS06045 844af4dae47fb10e7c939da16daa5261 343 PRINTS PR00142 RecA protein signature 211 239 2.0E-85 T 25-04-2016 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 RJP_RS06045 844af4dae47fb10e7c939da16daa5261 343 PRINTS PR00142 RecA protein signature 128 157 2.0E-85 T 25-04-2016 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 RJP_RS06045 844af4dae47fb10e7c939da16daa5261 343 PRINTS PR00142 RecA protein signature 94 123 2.0E-85 T 25-04-2016 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 RJP_RS06045 844af4dae47fb10e7c939da16daa5261 343 PRINTS PR00142 RecA protein signature 244 273 2.0E-85 T 25-04-2016 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 RJP_RS06045 844af4dae47fb10e7c939da16daa5261 343 PRINTS PR00142 RecA protein signature 166 195 2.0E-85 T 25-04-2016 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 RJP_RS06045 844af4dae47fb10e7c939da16daa5261 343 SUPERFAMILY SSF54752 269 326 3.01E-22 T 25-04-2016 IPR023400 DNA recombination and repair protein RecA, C-terminal RJP_RS01105 c16abf97e4977d95b49a92a172087749 768 PANTHER PTHR12815 9 766 9.4E-162 T 25-04-2016 RJP_RS01105 c16abf97e4977d95b49a92a172087749 768 PIRSF PIRSF006076 2 768 1.3E-221 T 25-04-2016 IPR023707 Outer membrane protein assembly factor BamA GO:0071709 RJP_RS01105 c16abf97e4977d95b49a92a172087749 768 TIGRFAM TIGR03303 OM_YaeT: outer membrane protein assembly complex, YaeT protein 27 767 4.2E-224 T 25-04-2016 IPR023707 Outer membrane protein assembly factor BamA GO:0071709 RJP_RS01105 c16abf97e4977d95b49a92a172087749 768 PANTHER PTHR12815:SF11 9 766 9.4E-162 T 25-04-2016 RJP_RS01105 c16abf97e4977d95b49a92a172087749 768 Gene3D G3DSA:2.40.160.50 593 765 1.6E-16 T 25-04-2016 RJP_RS01105 c16abf97e4977d95b49a92a172087749 768 Pfam PF07244 Surface antigen variable number repeat 97 172 1.1E-12 T 25-04-2016 IPR010827 Surface antigen variable number GO:0019867 RJP_RS01105 c16abf97e4977d95b49a92a172087749 768 Pfam PF07244 Surface antigen variable number repeat 27 93 2.7E-8 T 25-04-2016 IPR010827 Surface antigen variable number GO:0019867 RJP_RS01105 c16abf97e4977d95b49a92a172087749 768 Pfam PF07244 Surface antigen variable number repeat 267 342 1.8E-6 T 25-04-2016 IPR010827 Surface antigen variable number GO:0019867 RJP_RS01105 c16abf97e4977d95b49a92a172087749 768 Pfam PF07244 Surface antigen variable number repeat 347 420 5.3E-12 T 25-04-2016 IPR010827 Surface antigen variable number GO:0019867 RJP_RS01105 c16abf97e4977d95b49a92a172087749 768 Pfam PF07244 Surface antigen variable number repeat 177 263 6.5E-14 T 25-04-2016 IPR010827 Surface antigen variable number GO:0019867 RJP_RS01105 c16abf97e4977d95b49a92a172087749 768 Hamap MF_01430 Outer membrane protein assembly factor BamA [bamA]. 9 768 22.971 T 25-04-2016 IPR023707 Outer membrane protein assembly factor BamA GO:0071709 RJP_RS01105 c16abf97e4977d95b49a92a172087749 768 Pfam PF01103 Surface antigen 447 766 8.5E-59 T 25-04-2016 IPR000184 Bacterial surface antigen (D15) GO:0019867 RJP_RS04865 9ef17617bdcfcff07b412b504f4c2247 117 TIGRFAM TIGR01032 rplT_bact: ribosomal protein bL20 1 114 7.5E-51 T 25-04-2016 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 RJP_RS04865 9ef17617bdcfcff07b412b504f4c2247 117 Pfam PF00453 Ribosomal protein L20 3 108 5.5E-47 T 25-04-2016 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 RJP_RS04865 9ef17617bdcfcff07b412b504f4c2247 117 SUPERFAMILY SSF74731 2 115 3.53E-47 T 25-04-2016 RJP_RS04865 9ef17617bdcfcff07b412b504f4c2247 117 ProDom PD002389 RIBOSOMAL RRNA-BINDING RNA-BINDING RIBONUCLEOPROTEIN L20 50S L20 CHLOROPLAST BACTERIAL ORGANELLE 20 72 3.0E-17 T 25-04-2016 RJP_RS04865 9ef17617bdcfcff07b412b504f4c2247 117 Gene3D G3DSA:1.10.1900.20 55 116 5.9E-29 T 25-04-2016 RJP_RS04865 9ef17617bdcfcff07b412b504f4c2247 117 PANTHER PTHR10986 2 115 3.0E-59 T 25-04-2016 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 RJP_RS04865 9ef17617bdcfcff07b412b504f4c2247 117 PRINTS PR00062 Ribosomal protein L20 signature 42 71 2.7E-38 T 25-04-2016 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 RJP_RS04865 9ef17617bdcfcff07b412b504f4c2247 117 PRINTS PR00062 Ribosomal protein L20 signature 75 101 2.7E-38 T 25-04-2016 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 RJP_RS04865 9ef17617bdcfcff07b412b504f4c2247 117 PRINTS PR00062 Ribosomal protein L20 signature 12 41 2.7E-38 T 25-04-2016 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 RJP_RS04865 9ef17617bdcfcff07b412b504f4c2247 117 ProSitePatterns PS00937 Ribosomal protein L20 signature. 54 70 - T 25-04-2016 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 RJP_RS04865 9ef17617bdcfcff07b412b504f4c2247 117 Hamap MF_00382 50S ribosomal protein L20 [rplT]. 2 115 28.777 T 25-04-2016 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 RJP_RS02055 1a53e7b20ab79c05c5de631f6e4376ce 729 SUPERFAMILY SSF53474 464 712 1.11E-40 T 25-04-2016 IPR029058 Alpha/Beta hydrolase fold RJP_RS02055 1a53e7b20ab79c05c5de631f6e4376ce 729 PANTHER PTHR11757:SF3 201 729 3.6E-292 T 25-04-2016 RJP_RS02055 1a53e7b20ab79c05c5de631f6e4376ce 729 PANTHER PTHR11757:SF3 1 166 3.6E-292 T 25-04-2016 RJP_RS02055 1a53e7b20ab79c05c5de631f6e4376ce 729 SUPERFAMILY SSF50993 216 459 2.88E-70 T 25-04-2016 RJP_RS02055 1a53e7b20ab79c05c5de631f6e4376ce 729 SUPERFAMILY SSF50993 1 173 2.88E-70 T 25-04-2016 RJP_RS02055 1a53e7b20ab79c05c5de631f6e4376ce 729 TIGRFAM TIGR03775 RPE3: rickettsial palindromic element RPE3 domain 175 217 1.4E-22 T 25-04-2016 IPR022437 Rickettsia palindromic element RPE3 RJP_RS02055 1a53e7b20ab79c05c5de631f6e4376ce 729 Pfam PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain 3 451 1.0E-107 T 25-04-2016 IPR023302 Peptidase S9A, N-terminal domain GO:0004252|GO:0070008 RJP_RS02055 1a53e7b20ab79c05c5de631f6e4376ce 729 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 521 545 3.0E-44 T 25-04-2016 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 RJP_RS02055 1a53e7b20ab79c05c5de631f6e4376ce 729 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 655 677 3.0E-44 T 25-04-2016 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 RJP_RS02055 1a53e7b20ab79c05c5de631f6e4376ce 729 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 549 568 3.0E-44 T 25-04-2016 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 RJP_RS02055 1a53e7b20ab79c05c5de631f6e4376ce 729 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 579 599 3.0E-44 T 25-04-2016 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 RJP_RS02055 1a53e7b20ab79c05c5de631f6e4376ce 729 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 637 652 3.0E-44 T 25-04-2016 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 RJP_RS02055 1a53e7b20ab79c05c5de631f6e4376ce 729 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 495 513 3.0E-44 T 25-04-2016 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 RJP_RS02055 1a53e7b20ab79c05c5de631f6e4376ce 729 Gene3D G3DSA:2.130.10.120 76 178 1.4E-101 T 25-04-2016 IPR023302 Peptidase S9A, N-terminal domain GO:0004252|GO:0070008 RJP_RS02055 1a53e7b20ab79c05c5de631f6e4376ce 729 Gene3D G3DSA:2.130.10.120 221 455 1.4E-101 T 25-04-2016 IPR023302 Peptidase S9A, N-terminal domain GO:0004252|GO:0070008 RJP_RS02055 1a53e7b20ab79c05c5de631f6e4376ce 729 Gene3D G3DSA:3.40.50.1820 470 702 9.4E-32 T 25-04-2016 IPR029058 Alpha/Beta hydrolase fold RJP_RS02055 1a53e7b20ab79c05c5de631f6e4376ce 729 Pfam PF00326 Prolyl oligopeptidase family 511 726 8.5E-66 T 25-04-2016 IPR001375 Peptidase S9, prolyl oligopeptidase, catalytic domain GO:0006508|GO:0008236 RJP_RS02055 1a53e7b20ab79c05c5de631f6e4376ce 729 PANTHER PTHR11757 201 729 3.6E-292 T 25-04-2016 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 RJP_RS02055 1a53e7b20ab79c05c5de631f6e4376ce 729 PANTHER PTHR11757 1 166 3.6E-292 T 25-04-2016 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 RJP_RS06750 ab495e4f2c321ac0a81a187ffd14d947 878 Hamap MF_00036_B Alanine--tRNA ligase [alaS]. 1 878 175.844 T 25-04-2016 IPR023033 Alanine-tRNA ligase, eukaryota/bacteria GO:0004813 KEGG: 00970+6.1.1.7 RJP_RS06750 ab495e4f2c321ac0a81a187ffd14d947 878 PANTHER PTHR11777:SF9 1 872 0.0 T 25-04-2016 RJP_RS06750 ab495e4f2c321ac0a81a187ffd14d947 878 Gene3D G3DSA:3.30.930.10 4 243 8.0E-111 T 25-04-2016 RJP_RS06750 ab495e4f2c321ac0a81a187ffd14d947 878 TIGRFAM TIGR00344 alaS: alanine--tRNA ligase 8 858 1.0E-286 T 25-04-2016 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7|Reactome: REACT_71 RJP_RS06750 ab495e4f2c321ac0a81a187ffd14d947 878 PANTHER PTHR11777 1 872 0.0 T 25-04-2016 RJP_RS06750 ab495e4f2c321ac0a81a187ffd14d947 878 SUPERFAMILY SSF50447 455 553 4.94E-14 T 25-04-2016 IPR009000 Translation protein, beta-barrel domain RJP_RS06750 ab495e4f2c321ac0a81a187ffd14d947 878 SUPERFAMILY SSF55681 4 247 2.29E-105 T 25-04-2016 RJP_RS06750 ab495e4f2c321ac0a81a187ffd14d947 878 SMART SM00863 656 699 2.2E-23 T 25-04-2016 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0005524|GO:0016876|GO:0043039 RJP_RS06750 ab495e4f2c321ac0a81a187ffd14d947 878 Pfam PF07973 Threonyl and Alanyl tRNA synthetase second additional domain 656 699 3.6E-20 T 25-04-2016 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0005524|GO:0016876|GO:0043039 RJP_RS06750 ab495e4f2c321ac0a81a187ffd14d947 878 PRINTS PR00980 Alanyl-tRNA synthetase signature 77 88 1.1E-31 T 25-04-2016 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7|Reactome: REACT_71 RJP_RS06750 ab495e4f2c321ac0a81a187ffd14d947 878 PRINTS PR00980 Alanyl-tRNA synthetase signature 276 292 1.1E-31 T 25-04-2016 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7|Reactome: REACT_71 RJP_RS06750 ab495e4f2c321ac0a81a187ffd14d947 878 PRINTS PR00980 Alanyl-tRNA synthetase signature 300 313 1.1E-31 T 25-04-2016 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7|Reactome: REACT_71 RJP_RS06750 ab495e4f2c321ac0a81a187ffd14d947 878 PRINTS PR00980 Alanyl-tRNA synthetase signature 201 212 1.1E-31 T 25-04-2016 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7|Reactome: REACT_71 RJP_RS06750 ab495e4f2c321ac0a81a187ffd14d947 878 PRINTS PR00980 Alanyl-tRNA synthetase signature 228 241 1.1E-31 T 25-04-2016 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7|Reactome: REACT_71 RJP_RS06750 ab495e4f2c321ac0a81a187ffd14d947 878 Gene3D G3DSA:3.30.980.10 675 689 2.2E-6 T 25-04-2016 RJP_RS06750 ab495e4f2c321ac0a81a187ffd14d947 878 Gene3D G3DSA:3.30.980.10 565 624 2.2E-6 T 25-04-2016 RJP_RS06750 ab495e4f2c321ac0a81a187ffd14d947 878 Pfam PF01411 tRNA synthetases class II (A) 8 557 1.3E-223 T 25-04-2016 IPR018164 Alanyl-tRNA synthetase, class IIc, N-terminal GO:0000166|GO:0004813|GO:0005524|GO:0006419 KEGG: 00970+6.1.1.7 RJP_RS06750 ab495e4f2c321ac0a81a187ffd14d947 878 SUPERFAMILY SSF55186 555 714 6.02E-51 T 25-04-2016 IPR018163 Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain GO:0000166 RJP_RS06750 ab495e4f2c321ac0a81a187ffd14d947 878 Pfam PF02272 DHHA1 domain 804 870 1.9E-8 T 25-04-2016 IPR003156 DHHA1 domain GO:0003676 KEGG: 00970+6.1.1.7 RJP_RS06750 ab495e4f2c321ac0a81a187ffd14d947 878 SUPERFAMILY SSF101353 248 463 8.76E-63 T 25-04-2016 IPR018162 Alanine-tRNA ligase, class IIc, anti-codon-binding domain GO:0000166|GO:0004813|GO:0005524|GO:0005737|GO:0006419 KEGG: 00970+6.1.1.7|Reactome: REACT_71 RJP_RS02415 f16085a46df35a110b1af42475e26a38 776 Pfam PF01131 DNA topoisomerase 131 556 7.2E-130 T 25-04-2016 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 RJP_RS02415 f16085a46df35a110b1af42475e26a38 776 SMART SM00437 249 519 2.1E-129 T 25-04-2016 IPR003602 DNA topoisomerase, type IA, DNA-binding domain GO:0003677|GO:0003916|GO:0006265 RJP_RS02415 f16085a46df35a110b1af42475e26a38 776 SUPERFAMILY SSF56712 1 570 2.88E-189 T 25-04-2016 IPR023405 DNA topoisomerase, type IA, core domain RJP_RS02415 f16085a46df35a110b1af42475e26a38 776 SUPERFAMILY SSF56712 598 606 2.88E-189 T 25-04-2016 IPR023405 DNA topoisomerase, type IA, core domain RJP_RS02415 f16085a46df35a110b1af42475e26a38 776 PANTHER PTHR11390:SF27 1 682 0.0 T 25-04-2016 RJP_RS02415 f16085a46df35a110b1af42475e26a38 776 SMART SM00493 1 101 6.8E-32 T 25-04-2016 IPR006171 Toprim domain RJP_RS02415 f16085a46df35a110b1af42475e26a38 776 Pfam PF13368 Topoisomerase C-terminal repeat 719 770 4.3E-10 T 25-04-2016 IPR025589 Topoisomerase C-terminal repeat RJP_RS02415 f16085a46df35a110b1af42475e26a38 776 Pfam PF13368 Topoisomerase C-terminal repeat 660 714 8.8E-9 T 25-04-2016 IPR025589 Topoisomerase C-terminal repeat RJP_RS02415 f16085a46df35a110b1af42475e26a38 776 Gene3D G3DSA:3.30.65.10 599 634 2.8E-9 T 25-04-2016 RJP_RS02415 f16085a46df35a110b1af42475e26a38 776 Gene3D G3DSA:1.10.460.10 136 188 1.2E-56 T 25-04-2016 IPR013824 DNA topoisomerase, type IA, central region, subdomain 1 RJP_RS02415 f16085a46df35a110b1af42475e26a38 776 Gene3D G3DSA:1.10.460.10 459 570 1.2E-56 T 25-04-2016 IPR013824 DNA topoisomerase, type IA, central region, subdomain 1 RJP_RS02415 f16085a46df35a110b1af42475e26a38 776 Pfam PF01751 Toprim domain 3 116 1.6E-27 T 25-04-2016 IPR006171 Toprim domain RJP_RS02415 f16085a46df35a110b1af42475e26a38 776 Pfam PF01396 Topoisomerase DNA binding C4 zinc finger 599 633 1.7E-13 T 25-04-2016 IPR013498 DNA topoisomerase, type IA, zn finger GO:0003677|GO:0003916|GO:0005694|GO:0006265 RJP_RS02415 f16085a46df35a110b1af42475e26a38 776 ProSitePatterns PS00396 Prokaryotic DNA topoisomerase I active site. 286 308 - T 25-04-2016 IPR023406 DNA topoisomerase, type IA, active site GO:0003917 RJP_RS02415 f16085a46df35a110b1af42475e26a38 776 PANTHER PTHR11390 1 682 0.0 T 25-04-2016 IPR000380 DNA topoisomerase, type IA GO:0003677|GO:0003917|GO:0006265 RJP_RS02415 f16085a46df35a110b1af42475e26a38 776 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 75 88 6.6E-34 T 25-04-2016 IPR000380 DNA topoisomerase, type IA GO:0003677|GO:0003917|GO:0006265 RJP_RS02415 f16085a46df35a110b1af42475e26a38 776 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 377 393 6.6E-34 T 25-04-2016 IPR000380 DNA topoisomerase, type IA GO:0003677|GO:0003917|GO:0006265 RJP_RS02415 f16085a46df35a110b1af42475e26a38 776 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 482 496 6.6E-34 T 25-04-2016 IPR000380 DNA topoisomerase, type IA GO:0003677|GO:0003917|GO:0006265 RJP_RS02415 f16085a46df35a110b1af42475e26a38 776 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 299 308 6.6E-34 T 25-04-2016 IPR000380 DNA topoisomerase, type IA GO:0003677|GO:0003917|GO:0006265 RJP_RS02415 f16085a46df35a110b1af42475e26a38 776 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 165 183 6.6E-34 T 25-04-2016 IPR000380 DNA topoisomerase, type IA GO:0003677|GO:0003917|GO:0006265 RJP_RS02415 f16085a46df35a110b1af42475e26a38 776 TIGRFAM TIGR01051 topA_bact: DNA topoisomerase I 3 633 4.1E-276 T 25-04-2016 IPR005733 DNA topoisomerase I, bacterial-type GO:0003677|GO:0003917|GO:0006265 RJP_RS02415 f16085a46df35a110b1af42475e26a38 776 Gene3D G3DSA:2.70.20.10 325 458 1.3E-31 T 25-04-2016 IPR013825 DNA topoisomerase, type IA, central region, subdomain 2 RJP_RS02415 f16085a46df35a110b1af42475e26a38 776 Gene3D G3DSA:2.70.20.10 189 319 7.3E-32 T 25-04-2016 IPR013825 DNA topoisomerase, type IA, central region, subdomain 2 RJP_RS02415 f16085a46df35a110b1af42475e26a38 776 Gene3D G3DSA:3.40.50.140 1 135 4.0E-45 T 25-04-2016 IPR006171 Toprim domain RJP_RS02415 f16085a46df35a110b1af42475e26a38 776 SMART SM00436 107 195 3.7E-51 T 25-04-2016 IPR003601 DNA topoisomerase, type IA, domain 2 GO:0003677|GO:0003916|GO:0006265 RJP_RS02415 f16085a46df35a110b1af42475e26a38 776 SUPERFAMILY SSF57783 598 634 6.63E-8 T 25-04-2016 RJP_RS02415 f16085a46df35a110b1af42475e26a38 776 Hamap MF_00952 DNA topoisomerase 1 [topA]. 1 686 55.85 T 25-04-2016 IPR028612 DNA topoisomerase I, type IA GO:0003677|GO:0003916|GO:0006265 RJP_RS06675 6b3bbc82ffe39369a7f512e1d797c812 313 SUPERFAMILY SSF55174 12 67 1.5E-11 T 25-04-2016 RJP_RS06675 6b3bbc82ffe39369a7f512e1d797c812 313 Pfam PF01479 S4 domain 14 60 1.1E-9 T 25-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 RJP_RS06675 6b3bbc82ffe39369a7f512e1d797c812 313 Gene3D G3DSA:3.10.290.10 12 62 1.4E-13 T 25-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 RJP_RS06675 6b3bbc82ffe39369a7f512e1d797c812 313 SMART SM00363 13 78 1.7E-12 T 25-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 RJP_RS06675 6b3bbc82ffe39369a7f512e1d797c812 313 ProSitePatterns PS01129 Rlu family of pseudouridine synthase signature. 133 147 - T 25-04-2016 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0009982 RJP_RS06675 6b3bbc82ffe39369a7f512e1d797c812 313 TIGRFAM TIGR00005 rluA_subfam: pseudouridine synthase, RluA family 10 311 1.3E-88 T 25-04-2016 IPR006225 Pseudouridine synthase, RluC/RluD GO:0001522|GO:0003723|GO:0009451|GO:0009982 RJP_RS06675 6b3bbc82ffe39369a7f512e1d797c812 313 PANTHER PTHR11079:SF73 1 313 1.9E-115 T 25-04-2016 RJP_RS06675 6b3bbc82ffe39369a7f512e1d797c812 313 PANTHER PTHR11079 1 313 1.9E-115 T 25-04-2016 RJP_RS06675 6b3bbc82ffe39369a7f512e1d797c812 313 SUPERFAMILY SSF55120 76 312 2.28E-72 T 25-04-2016 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 RJP_RS06675 6b3bbc82ffe39369a7f512e1d797c812 313 Pfam PF00849 RNA pseudouridylate synthase 87 244 1.8E-31 T 25-04-2016 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 RJP_RS05660 eb5499b036d69eadf033ced457fb90ff 290 PANTHER PTHR30606 1 290 1.7E-52 T 25-04-2016 RJP_RS05660 eb5499b036d69eadf033ced457fb90ff 290 Pfam PF03279 Bacterial lipid A biosynthesis acyltransferase 1 290 5.4E-90 T 25-04-2016 IPR004960 Bacterial lipid A biosynthesis acyltransferase GO:0016021|GO:0016740 RJP_RS02930 6b292714d8e8afc74401efb9749cddff 315 Pfam PF02016 LD-carboxypeptidase 30 301 2.6E-58 T 25-04-2016 IPR003507 Peptidase family S66 RJP_RS02930 6b292714d8e8afc74401efb9749cddff 315 PANTHER PTHR30237 19 297 6.6E-43 T 25-04-2016 RJP_RS02930 6b292714d8e8afc74401efb9749cddff 315 PANTHER PTHR30237:SF2 19 297 6.6E-43 T 25-04-2016 RJP_RS02930 6b292714d8e8afc74401efb9749cddff 315 SUPERFAMILY SSF141986 184 303 9.42E-32 T 25-04-2016 IPR027461 LD-carboxypeptidase A, C-terminal domain RJP_RS02930 6b292714d8e8afc74401efb9749cddff 315 SUPERFAMILY SSF52317 29 175 1.92E-26 T 25-04-2016 IPR029062 Class I glutamine amidotransferase-like RJP_RS02930 6b292714d8e8afc74401efb9749cddff 315 Gene3D G3DSA:3.40.50.10740 29 176 4.8E-29 T 25-04-2016 IPR027478 Murein tetrapeptide carboxypeptidase, N-terminal domain RJP_RS02930 6b292714d8e8afc74401efb9749cddff 315 Gene3D G3DSA:3.50.30.60 191 304 5.1E-33 T 25-04-2016 IPR027461 LD-carboxypeptidase A, C-terminal domain RJP_RS02930 6b292714d8e8afc74401efb9749cddff 315 PIRSF PIRSF028757 22 313 3.7E-89 T 25-04-2016 IPR003507 Peptidase family S66 RJP_RS06150 c2adb5aacdb4c392afe03acb00c97b46 64 Gene3D G3DSA:3.30.300.10 11 56 4.6E-21 T 25-04-2016 RJP_RS06150 c2adb5aacdb4c392afe03acb00c97b46 64 Pfam PF00438 S-adenosylmethionine synthetase, N-terminal domain 3 57 4.6E-26 T 25-04-2016 IPR022628 S-adenosylmethionine synthetase, N-terminal GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: REACT_13433|UniPathway: UPA00315 RJP_RS06150 c2adb5aacdb4c392afe03acb00c97b46 64 PANTHER PTHR11964 1 55 1.7E-33 T 25-04-2016 IPR002133 S-adenosylmethionine synthetase GO:0004478|GO:0005524|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: REACT_13433|UniPathway: UPA00315 RJP_RS06150 c2adb5aacdb4c392afe03acb00c97b46 64 SUPERFAMILY SSF55973 3 58 1.02E-25 T 25-04-2016 IPR022636 S-adenosylmethionine synthetase superfamily GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: REACT_13433|UniPathway: UPA00315 RJP_RS03135 0dc692fe6d87fd5fcc1261e57e4bb2f6 290 ProSitePatterns PS00770 Aminotransferases class-IV signature. 189 217 - T 25-04-2016 IPR018300 Aminotransferase, class IV, conserved site GO:0003824|GO:0008152 Reactome: REACT_13 RJP_RS03135 0dc692fe6d87fd5fcc1261e57e4bb2f6 290 Gene3D G3DSA:3.30.470.10 2 111 1.1E-37 T 25-04-2016 RJP_RS03135 0dc692fe6d87fd5fcc1261e57e4bb2f6 290 Pfam PF01063 Amino-transferase class IV 40 262 4.8E-50 T 25-04-2016 IPR001544 Aminotransferase class IV GO:0003824|GO:0008152 Reactome: REACT_13 RJP_RS03135 0dc692fe6d87fd5fcc1261e57e4bb2f6 290 PANTHER PTHR11825 13 290 1.7E-72 T 25-04-2016 IPR001544 Aminotransferase class IV GO:0003824|GO:0008152 Reactome: REACT_13 RJP_RS03135 0dc692fe6d87fd5fcc1261e57e4bb2f6 290 TIGRFAM TIGR01122 ilvE_I: branched-chain amino acid aminotransferase 14 289 1.4E-74 T 25-04-2016 IPR005785 Branched-chain amino acid aminotransferase I GO:0004084|GO:0009081 KEGG: 00270+2.6.1.42|KEGG: 00280+2.6.1.42|KEGG: 00290+2.6.1.42|KEGG: 00770+2.6.1.42|KEGG: 00966+2.6.1.42|MetaCyc: PWY-5057|MetaCyc: PWY-5076|MetaCyc: PWY-5078|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5108|UniPathway: UPA00047|UniPathway: UPA00048|UniPathway: UPA00049 RJP_RS03135 0dc692fe6d87fd5fcc1261e57e4bb2f6 290 Gene3D G3DSA:3.20.10.10 130 289 1.2E-43 T 25-04-2016 RJP_RS03135 0dc692fe6d87fd5fcc1261e57e4bb2f6 290 PANTHER PTHR11825:SF7 13 290 1.7E-72 T 25-04-2016 RJP_RS03135 0dc692fe6d87fd5fcc1261e57e4bb2f6 290 SUPERFAMILY SSF56752 12 288 5.89E-76 T 25-04-2016 IPR001544 Aminotransferase class IV GO:0003824|GO:0008152 Reactome: REACT_13 RJP_RS04730 1a3ff04ca989b2e7ee7086e602a7ea1c 250 Gene3D G3DSA:1.10.3470.10 44 243 2.7E-8 T 25-04-2016 IPR029022 ABC transporter, BtuC-like RJP_RS04730 1a3ff04ca989b2e7ee7086e602a7ea1c 250 PANTHER PTHR30477 5 249 7.6E-37 T 25-04-2016 RJP_RS04730 1a3ff04ca989b2e7ee7086e602a7ea1c 250 Pfam PF00950 ABC 3 transport family 4 244 6.0E-40 T 25-04-2016 IPR001626 ABC-3 GO:0005524|GO:0006810|GO:0016020|GO:0042626 RJP_RS04730 1a3ff04ca989b2e7ee7086e602a7ea1c 250 SUPERFAMILY SSF81345 5 249 2.62E-23 T 25-04-2016 IPR029022 ABC transporter, BtuC-like RJP_RS04730 1a3ff04ca989b2e7ee7086e602a7ea1c 250 PANTHER PTHR30477:SF0 5 249 7.6E-37 T 25-04-2016 RJP_RS06265 54a7184f9a9070e6a8e9875f7268df5a 191 Pfam PF00005 ABC transporter 14 145 4.7E-25 T 25-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 RJP_RS06265 54a7184f9a9070e6a8e9875f7268df5a 191 SMART SM00382 21 188 3.6E-5 T 25-04-2016 IPR003593 AAA+ ATPase domain RJP_RS06265 54a7184f9a9070e6a8e9875f7268df5a 191 Gene3D G3DSA:3.40.50.300 10 188 2.1E-32 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RJP_RS06265 54a7184f9a9070e6a8e9875f7268df5a 191 SUPERFAMILY SSF52540 9 183 1.02E-34 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RJP_RS06265 54a7184f9a9070e6a8e9875f7268df5a 191 PANTHER PTHR24220:SF508 14 178 7.9E-40 T 25-04-2016 RJP_RS06265 54a7184f9a9070e6a8e9875f7268df5a 191 PANTHER PTHR24220 14 178 7.9E-40 T 25-04-2016 RJP_RS06265 54a7184f9a9070e6a8e9875f7268df5a 191 TIGRFAM TIGR01189 ccmA: heme ABC exporter, ATP-binding protein CcmA 14 190 1.8E-42 T 25-04-2016 IPR005895 ABC transporter, haem export, CcmA GO:0005215|GO:0017004|GO:0030288 RJP_RS05345 7d5ba88b32b21357842870d55f92088a 260 Pfam PF03372 Endonuclease/Exonuclease/phosphatase family 4 251 4.4E-25 T 25-04-2016 IPR005135 Endonuclease/exonuclease/phosphatase RJP_RS05345 7d5ba88b32b21357842870d55f92088a 260 SUPERFAMILY SSF56219 1 259 5.5E-72 T 25-04-2016 IPR005135 Endonuclease/exonuclease/phosphatase RJP_RS05345 7d5ba88b32b21357842870d55f92088a 260 PANTHER PTHR22748 1 259 7.8E-117 T 25-04-2016 IPR004808 AP endonuclease 1 GO:0004518|GO:0006281 RJP_RS05345 7d5ba88b32b21357842870d55f92088a 260 ProSitePatterns PS00726 AP endonucleases family 1 signature 1. 27 36 - T 25-04-2016 IPR020847 AP endonuclease 1, binding site GO:0003677|GO:0004519|GO:0005622|GO:0006281 RJP_RS05345 7d5ba88b32b21357842870d55f92088a 260 TIGRFAM TIGR00633 xth: exodeoxyribonuclease III (xth) 1 258 1.2E-66 T 25-04-2016 IPR004808 AP endonuclease 1 GO:0004518|GO:0006281 RJP_RS05345 7d5ba88b32b21357842870d55f92088a 260 TIGRFAM TIGR00195 exoDNase_III: exodeoxyribonuclease III 1 258 5.9E-72 T 25-04-2016 RJP_RS05345 7d5ba88b32b21357842870d55f92088a 260 Gene3D G3DSA:3.60.10.10 1 259 1.6E-73 T 25-04-2016 IPR005135 Endonuclease/exonuclease/phosphatase RJP_RS05345 7d5ba88b32b21357842870d55f92088a 260 PANTHER PTHR22748:SF7 1 259 7.8E-117 T 25-04-2016 RJP_RS01310 eaf2603c8382ce351da3dc42c34cee54 283 Pfam PF00510 Cytochrome c oxidase subunit III 17 283 1.3E-90 T 25-04-2016 IPR000298 Cytochrome c oxidase subunit III domain GO:0015002|GO:0016020 RJP_RS01310 eaf2603c8382ce351da3dc42c34cee54 283 SUPERFAMILY SSF81452 14 282 4.4E-91 T 25-04-2016 IPR000298 Cytochrome c oxidase subunit III domain GO:0015002|GO:0016020 RJP_RS01310 eaf2603c8382ce351da3dc42c34cee54 283 PANTHER PTHR11403 10 283 4.3E-140 T 25-04-2016 IPR024791 Cytochrome c oxidase subunit III GO:0015002|GO:0016020|GO:0019646 RJP_RS01310 eaf2603c8382ce351da3dc42c34cee54 283 PANTHER PTHR11403:SF7 10 283 4.3E-140 T 25-04-2016 RJP_RS01310 eaf2603c8382ce351da3dc42c34cee54 283 Gene3D G3DSA:1.20.120.80 84 282 1.8E-69 T 25-04-2016 IPR013833 Cytochrome c oxidase, subunit III, 4-helical bundle GO:0004129|GO:0016020|GO:0022904 RJP_RS01310 eaf2603c8382ce351da3dc42c34cee54 283 Gene3D G3DSA:1.10.287.70 15 82 2.2E-24 T 25-04-2016 RJP_RS03645 507f5b19469c244eed115ade8f74a6e2 440 PANTHER PTHR10108 72 179 9.5E-15 T 25-04-2016 RJP_RS03645 507f5b19469c244eed115ade8f74a6e2 440 Gene3D G3DSA:3.40.50.150 62 188 2.5E-26 T 25-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RJP_RS03645 507f5b19469c244eed115ade8f74a6e2 440 Gene3D G3DSA:3.40.50.150 237 275 2.5E-26 T 25-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RJP_RS03645 507f5b19469c244eed115ade8f74a6e2 440 Pfam PF13847 Methyltransferase domain 71 189 5.8E-17 T 25-04-2016 IPR025714 Methyltransferase domain RJP_RS03645 507f5b19469c244eed115ade8f74a6e2 440 SUPERFAMILY SSF53335 20 273 3.31E-27 T 25-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RJP_RS04700 0315740ad1fe8c09e69b9fcd996158f5 547 SUPERFAMILY SSF48592 406 522 9.99E-76 T 25-04-2016 RJP_RS04700 0315740ad1fe8c09e69b9fcd996158f5 547 SUPERFAMILY SSF48592 7 134 9.99E-76 T 25-04-2016 RJP_RS04700 0315740ad1fe8c09e69b9fcd996158f5 547 ProSitePatterns PS00296 Chaperonins cpn60 signature. 405 416 - T 25-04-2016 IPR018370 Chaperonin Cpn60, conserved site GO:0005524|GO:0005737|GO:0006457 RJP_RS04700 0315740ad1fe8c09e69b9fcd996158f5 547 Gene3D G3DSA:1.10.560.10 367 519 2.0E-41 T 25-04-2016 IPR027413 GroEL-like equatorial domain RJP_RS04700 0315740ad1fe8c09e69b9fcd996158f5 547 PANTHER PTHR11353 6 547 2.2E-246 T 25-04-2016 RJP_RS04700 0315740ad1fe8c09e69b9fcd996158f5 547 Pfam PF00118 TCP-1/cpn60 chaperonin family 23 525 5.1E-101 T 25-04-2016 IPR002423 Chaperonin Cpn60/TCP-1 family GO:0005524 RJP_RS04700 0315740ad1fe8c09e69b9fcd996158f5 547 Gene3D G3DSA:3.50.7.10 188 366 4.8E-98 T 25-04-2016 IPR027409 GroEL-like apical domain RJP_RS04700 0315740ad1fe8c09e69b9fcd996158f5 547 TIGRFAM TIGR02348 GroEL: chaperonin GroL 4 527 4.5E-245 T 25-04-2016 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 RJP_RS04700 0315740ad1fe8c09e69b9fcd996158f5 547 SUPERFAMILY SSF52029 187 376 8.55E-82 T 25-04-2016 IPR027409 GroEL-like apical domain RJP_RS04700 0315740ad1fe8c09e69b9fcd996158f5 547 SUPERFAMILY SSF54849 138 204 3.2E-22 T 25-04-2016 RJP_RS04700 0315740ad1fe8c09e69b9fcd996158f5 547 Hamap MF_00600 60 kDa chaperonin [groL]. 2 545 41.253 T 25-04-2016 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 RJP_RS04700 0315740ad1fe8c09e69b9fcd996158f5 547 PRINTS PR00298 60kDa chaperonin signature 398 419 5.3E-73 T 25-04-2016 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 RJP_RS04700 0315740ad1fe8c09e69b9fcd996158f5 547 PRINTS PR00298 60kDa chaperonin signature 350 375 5.3E-73 T 25-04-2016 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 RJP_RS04700 0315740ad1fe8c09e69b9fcd996158f5 547 PRINTS PR00298 60kDa chaperonin signature 83 110 5.3E-73 T 25-04-2016 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 RJP_RS04700 0315740ad1fe8c09e69b9fcd996158f5 547 PRINTS PR00298 60kDa chaperonin signature 268 291 5.3E-73 T 25-04-2016 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 RJP_RS04700 0315740ad1fe8c09e69b9fcd996158f5 547 PRINTS PR00298 60kDa chaperonin signature 27 53 5.3E-73 T 25-04-2016 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 RJP_RS04700 0315740ad1fe8c09e69b9fcd996158f5 547 Gene3D G3DSA:1.10.560.10 6 187 3.7E-44 T 25-04-2016 IPR027413 GroEL-like equatorial domain RJP_RS06280 a65ae831b0db57a5fbf0f8b4d41ff19a 671 ProSitePatterns PS00642 Respiratory-chain NADH dehydrogenase 75 Kd subunit signature 2. 98 110 - T 25-04-2016 IPR000283 NADH:ubiquinone oxidoreductase, 75kDa subunit, conserved site GO:0008137|GO:0016020|GO:0042773|GO:0055114 RJP_RS06280 a65ae831b0db57a5fbf0f8b4d41ff19a 671 SUPERFAMILY SSF54292 1 74 1.37E-20 T 25-04-2016 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 RJP_RS06280 a65ae831b0db57a5fbf0f8b4d41ff19a 671 SUPERFAMILY SSF53706 213 614 3.26E-90 T 25-04-2016 RJP_RS06280 a65ae831b0db57a5fbf0f8b4d41ff19a 671 Pfam PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region 83 121 7.1E-17 T 25-04-2016 IPR019574 NADH:ubiquinone oxidoreductase, subunit G, iron-sulphur binding GO:0016491|GO:0055114 RJP_RS06280 a65ae831b0db57a5fbf0f8b4d41ff19a 671 Gene3D G3DSA:3.40.50.740 271 456 1.5E-44 T 25-04-2016 RJP_RS06280 a65ae831b0db57a5fbf0f8b4d41ff19a 671 Gene3D G3DSA:3.40.50.740 513 615 1.5E-44 T 25-04-2016 RJP_RS06280 a65ae831b0db57a5fbf0f8b4d41ff19a 671 ProSitePatterns PS00641 Respiratory-chain NADH dehydrogenase 75 Kd subunit signature 1. 31 48 - T 25-04-2016 IPR000283 NADH:ubiquinone oxidoreductase, 75kDa subunit, conserved site GO:0008137|GO:0016020|GO:0042773|GO:0055114 RJP_RS06280 a65ae831b0db57a5fbf0f8b4d41ff19a 671 PANTHER PTHR11615:SF115 351 669 1.1E-303 T 25-04-2016 RJP_RS06280 a65ae831b0db57a5fbf0f8b4d41ff19a 671 PANTHER PTHR11615:SF115 3 313 1.1E-303 T 25-04-2016 RJP_RS06280 a65ae831b0db57a5fbf0f8b4d41ff19a 671 SUPERFAMILY SSF54862 75 211 3.01E-36 T 25-04-2016 RJP_RS06280 a65ae831b0db57a5fbf0f8b4d41ff19a 671 Gene3D G3DSA:3.10.20.30 2 54 5.4E-6 T 25-04-2016 IPR012675 Beta-grasp domain RJP_RS06280 a65ae831b0db57a5fbf0f8b4d41ff19a 671 TIGRFAM TIGR01973 NuoG: NADH dehydrogenase (quinone), G subunit 5 584 3.5E-240 T 25-04-2016 IPR010228 NADH:ubiquinone oxidoreductase, subunit G GO:0016651|GO:0051536|GO:0055114 RJP_RS06280 a65ae831b0db57a5fbf0f8b4d41ff19a 671 Pfam PF09326 NADH-ubiquinone oxidoreductase subunit G, C-terminal 623 659 3.2E-12 T 25-04-2016 IPR015405 NADH-quinone oxidoreductase, chain G, C-terminal GO:0016651|GO:0051536|GO:0055114 RJP_RS06280 a65ae831b0db57a5fbf0f8b4d41ff19a 671 PANTHER PTHR11615 351 669 1.1E-303 T 25-04-2016 RJP_RS06280 a65ae831b0db57a5fbf0f8b4d41ff19a 671 PANTHER PTHR11615 3 313 1.1E-303 T 25-04-2016 RJP_RS06280 a65ae831b0db57a5fbf0f8b4d41ff19a 671 SMART SM00929 83 123 1.4E-20 T 25-04-2016 IPR019574 NADH:ubiquinone oxidoreductase, subunit G, iron-sulphur binding GO:0016491|GO:0055114 RJP_RS06280 a65ae831b0db57a5fbf0f8b4d41ff19a 671 ProSitePatterns PS00643 Respiratory-chain NADH dehydrogenase 75 Kd subunit signature 3. 145 155 - T 25-04-2016 IPR000283 NADH:ubiquinone oxidoreductase, 75kDa subunit, conserved site GO:0008137|GO:0016020|GO:0042773|GO:0055114 RJP_RS06280 a65ae831b0db57a5fbf0f8b4d41ff19a 671 Pfam PF00384 Molybdopterin oxidoreductase 271 585 3.7E-65 T 25-04-2016 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 RJP_RS06280 a65ae831b0db57a5fbf0f8b4d41ff19a 671 Pfam PF13510 2Fe-2S iron-sulfur cluster binding domain 2 76 1.2E-18 T 25-04-2016 RJP_RS00860 bef0301b79ee263acacdfe9e104c97d5 227 Hamap MF_00104 Ribonuclease 3 [rnc]. 7 221 27.065 T 25-04-2016 IPR011907 Ribonuclease III GO:0003723|GO:0004525|GO:0016075 RJP_RS00860 bef0301b79ee263acacdfe9e104c97d5 227 ProSitePatterns PS00517 Ribonuclease III family signature. 43 51 - T 25-04-2016 IPR000999 Ribonuclease III domain GO:0003723|GO:0004525|GO:0006396 RJP_RS00860 bef0301b79ee263acacdfe9e104c97d5 227 SUPERFAMILY SSF69065 2 149 1.03E-43 T 25-04-2016 IPR000999 Ribonuclease III domain GO:0003723|GO:0004525|GO:0006396 RJP_RS00860 bef0301b79ee263acacdfe9e104c97d5 227 SMART SM00358 159 225 5.1E-22 T 25-04-2016 IPR014720 Double-stranded RNA-binding domain RJP_RS00860 bef0301b79ee263acacdfe9e104c97d5 227 PANTHER PTHR11207 4 225 1.6E-56 T 25-04-2016 RJP_RS00860 bef0301b79ee263acacdfe9e104c97d5 227 Pfam PF00035 Double-stranded RNA binding motif 159 223 2.5E-11 T 25-04-2016 IPR014720 Double-stranded RNA-binding domain RJP_RS00860 bef0301b79ee263acacdfe9e104c97d5 227 Pfam PF14622 Ribonuclease-III-like 17 144 2.8E-26 T 25-04-2016 IPR000999 Ribonuclease III domain GO:0003723|GO:0004525|GO:0006396 RJP_RS00860 bef0301b79ee263acacdfe9e104c97d5 227 Gene3D G3DSA:3.30.160.20 158 224 9.7E-21 T 25-04-2016 IPR014720 Double-stranded RNA-binding domain RJP_RS00860 bef0301b79ee263acacdfe9e104c97d5 227 SMART SM00535 19 154 6.2E-50 T 25-04-2016 IPR000999 Ribonuclease III domain GO:0003723|GO:0004525|GO:0006396 RJP_RS00860 bef0301b79ee263acacdfe9e104c97d5 227 SUPERFAMILY SSF54768 116 224 1.04E-23 T 25-04-2016 RJP_RS00860 bef0301b79ee263acacdfe9e104c97d5 227 Gene3D G3DSA:1.10.1520.10 4 150 1.6E-43 T 25-04-2016 IPR000999 Ribonuclease III domain GO:0003723|GO:0004525|GO:0006396 RJP_RS00860 bef0301b79ee263acacdfe9e104c97d5 227 TIGRFAM TIGR02191 RNaseIII: ribonuclease III 7 224 9.3E-74 T 25-04-2016 IPR011907 Ribonuclease III GO:0003723|GO:0004525|GO:0016075 RJP_RS01865 80d6809ef46946947300599bac955d27 326 Pfam PF02780 Transketolase, C-terminal domain 192 314 9.7E-40 T 25-04-2016 IPR033248 Transketolase, C-terminal domain RJP_RS01865 80d6809ef46946947300599bac955d27 326 Pfam PF02779 Transketolase, pyrimidine binding domain 2 178 1.2E-50 T 25-04-2016 IPR005475 Transketolase-like, pyrimidine-binding domain RJP_RS01865 80d6809ef46946947300599bac955d27 326 SUPERFAMILY SSF52922 188 322 3.93E-41 T 25-04-2016 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 RJP_RS01865 80d6809ef46946947300599bac955d27 326 Gene3D G3DSA:3.40.50.920 195 320 2.7E-45 T 25-04-2016 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 RJP_RS01865 80d6809ef46946947300599bac955d27 326 Gene3D G3DSA:3.40.50.970 2 194 1.0E-94 T 25-04-2016 IPR029061 Thiamin diphosphate-binding fold RJP_RS01865 80d6809ef46946947300599bac955d27 326 PANTHER PTHR11624 2 324 8.8E-169 T 25-04-2016 IPR033247 Transketolase family RJP_RS01865 80d6809ef46946947300599bac955d27 326 SUPERFAMILY SSF52518 3 201 5.89E-70 T 25-04-2016 IPR029061 Thiamin diphosphate-binding fold RJP_RS01865 80d6809ef46946947300599bac955d27 326 SMART SM00861 3 178 2.3E-60 T 25-04-2016 IPR005475 Transketolase-like, pyrimidine-binding domain RJP_RS03555 d66e186222efdb09e54d79ef72119dd8 878 Gene3D G3DSA:1.20.80.30 115 195 5.3E-22 T 25-04-2016 RJP_RS03555 d66e186222efdb09e54d79ef72119dd8 878 Gene3D G3DSA:3.50.30.10 408 510 2.6E-37 T 25-04-2016 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 RJP_RS03555 d66e186222efdb09e54d79ef72119dd8 878 Gene3D G3DSA:3.30.470.20 246 348 6.4E-37 T 25-04-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 RJP_RS03555 d66e186222efdb09e54d79ef72119dd8 878 PANTHER PTHR22931:SF9 1 877 0.0 T 25-04-2016 IPR010121 Pyruvate, phosphate dikinase GO:0006090|GO:0050242 KEGG: 00620+2.7.9.1|KEGG: 00710+2.7.9.1|KEGG: 00720+2.7.9.1|MetaCyc: PWY-241|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117 RJP_RS03555 d66e186222efdb09e54d79ef72119dd8 878 Gene3D G3DSA:3.20.20.60 537 876 2.4E-126 T 25-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 RJP_RS03555 d66e186222efdb09e54d79ef72119dd8 878 Pfam PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain 306 364 8.9E-11 T 25-04-2016 IPR002192 Pyruvate phosphate dikinase, PEP/pyruvate-binding GO:0005524|GO:0016301|GO:0016310 RJP_RS03555 d66e186222efdb09e54d79ef72119dd8 878 Pfam PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain 21 298 4.4E-42 T 25-04-2016 IPR002192 Pyruvate phosphate dikinase, PEP/pyruvate-binding GO:0005524|GO:0016301|GO:0016310 RJP_RS03555 d66e186222efdb09e54d79ef72119dd8 878 ProSitePatterns PS00742 PEP-utilizing enzymes signature 2. 765 783 - T 25-04-2016 IPR023151 PEP-utilising enzyme, conserved site GO:0016772 RJP_RS03555 d66e186222efdb09e54d79ef72119dd8 878 SUPERFAMILY SSF51621 516 876 1.95E-117 T 25-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 RJP_RS03555 d66e186222efdb09e54d79ef72119dd8 878 Pfam PF02896 PEP-utilising enzyme, TIM barrel domain 524 874 1.9E-83 T 25-04-2016 IPR000121 PEP-utilising enzyme, C-terminal GO:0016310|GO:0016772 RJP_RS03555 d66e186222efdb09e54d79ef72119dd8 878 SUPERFAMILY SSF56059 1 385 1.41E-126 T 25-04-2016 RJP_RS03555 d66e186222efdb09e54d79ef72119dd8 878 ProSitePatterns PS00370 PEP-utilizing enzymes phosphorylation site signature. 454 465 - T 25-04-2016 IPR018274 PEP-utilising enzyme, active site GO:0016310|GO:0016772 RJP_RS03555 d66e186222efdb09e54d79ef72119dd8 878 Pfam PF00391 PEP-utilising enzyme, mobile domain 426 507 6.6E-27 T 25-04-2016 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 RJP_RS03555 d66e186222efdb09e54d79ef72119dd8 878 Gene3D G3DSA:1.10.189.10 349 407 8.9E-27 T 25-04-2016 RJP_RS03555 d66e186222efdb09e54d79ef72119dd8 878 SUPERFAMILY SSF52009 397 516 4.06E-35 T 25-04-2016 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 RJP_RS03555 d66e186222efdb09e54d79ef72119dd8 878 TIGRFAM TIGR01828 pyru_phos_dikin: pyruvate, phosphate dikinase 2 875 0.0 T 25-04-2016 IPR010121 Pyruvate, phosphate dikinase GO:0006090|GO:0050242 KEGG: 00620+2.7.9.1|KEGG: 00710+2.7.9.1|KEGG: 00720+2.7.9.1|MetaCyc: PWY-241|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117 RJP_RS03555 d66e186222efdb09e54d79ef72119dd8 878 PIRSF PIRSF000853 1 878 0.0 T 25-04-2016 IPR010121 Pyruvate, phosphate dikinase GO:0006090|GO:0050242 KEGG: 00620+2.7.9.1|KEGG: 00710+2.7.9.1|KEGG: 00720+2.7.9.1|MetaCyc: PWY-241|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117 RJP_RS03555 d66e186222efdb09e54d79ef72119dd8 878 PANTHER PTHR22931 1 877 0.0 T 25-04-2016 RJP_RS03555 d66e186222efdb09e54d79ef72119dd8 878 Gene3D G3DSA:3.30.1490.20 4 114 1.4E-51 T 25-04-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 RJP_RS03555 d66e186222efdb09e54d79ef72119dd8 878 Gene3D G3DSA:3.30.1490.20 202 245 1.4E-51 T 25-04-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 RJP_RS03500 917f5e1889854fb59b9d7e0679a13df3 91 SUPERFAMILY SSF47060 3 89 5.89E-34 T 25-04-2016 IPR009068 S15/NS1, RNA-binding Reactome: REACT_71 RJP_RS03500 917f5e1889854fb59b9d7e0679a13df3 91 Gene3D G3DSA:1.10.287.10 3 89 3.6E-36 T 25-04-2016 IPR009068 S15/NS1, RNA-binding Reactome: REACT_71 RJP_RS03500 917f5e1889854fb59b9d7e0679a13df3 91 PANTHER PTHR23321 1 90 2.1E-37 T 25-04-2016 RJP_RS03500 917f5e1889854fb59b9d7e0679a13df3 91 Pfam PF00312 Ribosomal protein S15 8 88 6.0E-35 T 25-04-2016 IPR000589 Ribosomal protein S15 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RJP_RS03500 917f5e1889854fb59b9d7e0679a13df3 91 TIGRFAM TIGR00952 S15_bact: ribosomal protein uS15 4 89 1.3E-40 T 25-04-2016 IPR005290 Ribosomal protein S15, bacterial-type GO:0003735|GO:0005840|GO:0006412 RJP_RS03500 917f5e1889854fb59b9d7e0679a13df3 91 SMART SM01387 8 88 1.3E-47 T 25-04-2016 IPR000589 Ribosomal protein S15 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RJP_RS03500 917f5e1889854fb59b9d7e0679a13df3 91 ProSitePatterns PS00362 Ribosomal protein S15 signature. 39 69 - T 25-04-2016 IPR000589 Ribosomal protein S15 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RJP_RS03500 917f5e1889854fb59b9d7e0679a13df3 91 Hamap MF_01343_B 30S ribosomal protein S15 [rpsO]. 3 89 21.829 T 25-04-2016 IPR005290 Ribosomal protein S15, bacterial-type GO:0003735|GO:0005840|GO:0006412 RJP_RS03500 917f5e1889854fb59b9d7e0679a13df3 91 ProDom PD157043 RIBOSOMAL S15 RIBONUCLEOPROTEIN RRNA-BINDING RNA-BINDING 30S CHLOROPLAST S15 MITOCHONDRIAL TYPE 12 88 3.0E-28 T 25-04-2016 RJP_RS00090 383198563be6871596bd854e7d1d01e3 331 ProSitePatterns PS01136 Uncharacterized protein family UPF0034 signature. 96 114 - T 25-04-2016 IPR018517 tRNA-dihydrouridine synthase, conserved site GO:0008033|GO:0017150|GO:0050660|GO:0055114 RJP_RS00090 383198563be6871596bd854e7d1d01e3 331 PIRSF PIRSF006621 1 330 4.3E-121 T 25-04-2016 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 RJP_RS00090 383198563be6871596bd854e7d1d01e3 331 PANTHER PTHR11082:SF25 2 324 1.2E-131 T 25-04-2016 RJP_RS00090 383198563be6871596bd854e7d1d01e3 331 PANTHER PTHR11082 2 324 1.2E-131 T 25-04-2016 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 RJP_RS00090 383198563be6871596bd854e7d1d01e3 331 Gene3D G3DSA:3.20.20.70 8 247 1.6E-82 T 25-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 RJP_RS00090 383198563be6871596bd854e7d1d01e3 331 SUPERFAMILY SSF51395 13 320 2.38E-90 T 25-04-2016 RJP_RS00090 383198563be6871596bd854e7d1d01e3 331 Pfam PF01207 Dihydrouridine synthase (Dus) 14 316 1.8E-110 T 25-04-2016 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 RJP_RS00090 383198563be6871596bd854e7d1d01e3 331 Gene3D G3DSA:1.10.1200.80 254 325 1.7E-20 T 25-04-2016 IPR024036 tRNA-dihydrouridine synthase, putative, C-terminal GO:0016491|GO:0055114 RJP_RS00090 383198563be6871596bd854e7d1d01e3 331 TIGRFAM TIGR00737 nifR3_yhdG: putative TIM-barrel protein, nifR3 family 4 322 3.2E-137 T 25-04-2016 IPR004652 tRNA-dihydrouridine synthase, TIM-barrel, NifR3 GO:0008033|GO:0016491|GO:0050660|GO:0055114 RJP_RS01180 9c5c67d4b2a04e87419f5ed6e0e9ae57 98 SUPERFAMILY SSF53474 4 96 3.57E-19 T 25-04-2016 IPR029058 Alpha/Beta hydrolase fold RJP_RS01180 9c5c67d4b2a04e87419f5ed6e0e9ae57 98 PANTHER PTHR11757:SF13 6 96 1.2E-41 T 25-04-2016 RJP_RS01180 9c5c67d4b2a04e87419f5ed6e0e9ae57 98 PANTHER PTHR11757 6 96 1.2E-41 T 25-04-2016 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 RJP_RS01180 9c5c67d4b2a04e87419f5ed6e0e9ae57 98 Pfam PF00326 Prolyl oligopeptidase family 5 97 1.7E-29 T 25-04-2016 IPR001375 Peptidase S9, prolyl oligopeptidase, catalytic domain GO:0006508|GO:0008236 RJP_RS01180 9c5c67d4b2a04e87419f5ed6e0e9ae57 98 Gene3D G3DSA:3.40.50.1820 4 97 1.9E-34 T 25-04-2016 IPR029058 Alpha/Beta hydrolase fold RJP_RS01180 9c5c67d4b2a04e87419f5ed6e0e9ae57 98 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 8 32 6.04E-25 T 25-04-2016 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 RJP_RS01180 9c5c67d4b2a04e87419f5ed6e0e9ae57 98 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 66 86 6.04E-25 T 25-04-2016 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 RJP_RS01180 9c5c67d4b2a04e87419f5ed6e0e9ae57 98 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 36 55 6.04E-25 T 25-04-2016 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 RJP_RS03775 d8b21eb8e492128e9f929789328677ff 253 PANTHER PTHR12532 1 243 1.3E-97 T 25-04-2016 IPR002876 Transcriptional regulator TACO1-like RJP_RS03775 d8b21eb8e492128e9f929789328677ff 253 Gene3D G3DSA:1.10.10.200 1 79 2.5E-30 T 25-04-2016 IPR017856 Integrase, N-terminal zinc-binding domain-like RJP_RS03775 d8b21eb8e492128e9f929789328677ff 253 Gene3D G3DSA:3.30.70.980 136 204 2.3E-16 T 25-04-2016 IPR026564 Transcriptional regulator TACO1-like, domain 3 RJP_RS03775 d8b21eb8e492128e9f929789328677ff 253 Gene3D G3DSA:3.30.1270.10 214 247 4.7E-37 T 25-04-2016 IPR026563 Transcriptional regulator TACO1-like, domain 2 RJP_RS03775 d8b21eb8e492128e9f929789328677ff 253 Gene3D G3DSA:3.30.1270.10 83 135 4.7E-37 T 25-04-2016 IPR026563 Transcriptional regulator TACO1-like, domain 2 RJP_RS03775 d8b21eb8e492128e9f929789328677ff 253 Hamap MF_00693 Probable transcriptional regulatory protein YebC [yebC]. 3 241 32.371 T 25-04-2016 IPR002876 Transcriptional regulator TACO1-like RJP_RS03775 d8b21eb8e492128e9f929789328677ff 253 SUPERFAMILY SSF75625 5 247 5.1E-83 T 25-04-2016 IPR029072 YebC-like RJP_RS03775 d8b21eb8e492128e9f929789328677ff 253 PANTHER PTHR12532:SF0 1 243 1.3E-97 T 25-04-2016 RJP_RS03775 d8b21eb8e492128e9f929789328677ff 253 TIGRFAM TIGR01033 TIGR01033: DNA-binding regulatory protein, YebC/PmpR family 1 240 4.5E-97 T 25-04-2016 IPR002876 Transcriptional regulator TACO1-like RJP_RS03775 d8b21eb8e492128e9f929789328677ff 253 Pfam PF01709 Transcriptional regulator 5 238 2.7E-82 T 25-04-2016 IPR002876 Transcriptional regulator TACO1-like RJP_RS06550 6662f5ef653cdc1fa54b0c826a6f4e12 168 ProSitePatterns PS00903 Cytidine and deoxycytidylate deaminases zinc-binding region signature. 63 100 - T 25-04-2016 IPR016192 APOBEC/CMP deaminase, zinc-binding GO:0008270|GO:0016787 RJP_RS06550 6662f5ef653cdc1fa54b0c826a6f4e12 168 Gene3D G3DSA:3.40.140.10 11 157 2.6E-48 T 25-04-2016 RJP_RS06550 6662f5ef653cdc1fa54b0c826a6f4e12 168 Pfam PF14437 MafB19-like deaminase 15 159 8.5E-31 T 25-04-2016 IPR028883 tRNA-specific adenosine deaminase GO:0002100|GO:0008251 RJP_RS06550 6662f5ef653cdc1fa54b0c826a6f4e12 168 PANTHER PTHR11079 15 160 3.0E-40 T 25-04-2016 RJP_RS06550 6662f5ef653cdc1fa54b0c826a6f4e12 168 SUPERFAMILY SSF53927 11 160 1.25E-44 T 25-04-2016 IPR016193 Cytidine deaminase-like GO:0003824 RJP_RS06550 6662f5ef653cdc1fa54b0c826a6f4e12 168 Hamap MF_00972 tRNA-specific adenosine deaminase [tadA]. 16 159 44.374 T 25-04-2016 IPR028883 tRNA-specific adenosine deaminase GO:0002100|GO:0008251 RJP_RS00175 e2161d932bbad96e586e227689efecfc 157 Pfam PF02326 Plant ATP synthase F0 2 77 4.7E-12 T 25-04-2016 IPR003319 ATP synthase YMF19-like, N-terminal RJP_RS02200 f5641c5c23943fc19e41ab914b5267bf 293 TIGRFAM TIGR02392 rpoH_proteo: alternative sigma factor RpoH 16 286 6.3E-111 T 25-04-2016 IPR012759 RNA polymerase sigma factor RpoH, proteobacteria GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0008270|GO:0009408|GO:0016987 RJP_RS02200 f5641c5c23943fc19e41ab914b5267bf 293 Hamap MF_00961 RNA polymerase sigma factor RpoH [rpoH]. 2 287 48.925 T 25-04-2016 IPR012759 RNA polymerase sigma factor RpoH, proteobacteria GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0008270|GO:0009408|GO:0016987 RJP_RS02200 f5641c5c23943fc19e41ab914b5267bf 293 Pfam PF04545 Sigma-70, region 4 232 283 2.1E-11 T 25-04-2016 IPR007630 RNA polymerase sigma-70 region 4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RJP_RS02200 f5641c5c23943fc19e41ab914b5267bf 293 PANTHER PTHR30376 2 285 2.7E-88 T 25-04-2016 RJP_RS02200 f5641c5c23943fc19e41ab914b5267bf 293 ProSitePatterns PS00715 Sigma-70 factors family signature 1. 77 90 - T 25-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RJP_RS02200 f5641c5c23943fc19e41ab914b5267bf 293 PIRSF PIRSF000770 3 291 9.4E-33 T 25-04-2016 IPR016263 RNA polymerase sporulation-specific sigma factor GO:0003677|GO:0006351|GO:0016987|GO:0030435 RJP_RS02200 f5641c5c23943fc19e41ab914b5267bf 293 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 49 284 9.6E-25 T 25-04-2016 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RJP_RS02200 f5641c5c23943fc19e41ab914b5267bf 293 Gene3D G3DSA:1.10.601.10 18 119 1.1E-36 T 25-04-2016 RJP_RS02200 f5641c5c23943fc19e41ab914b5267bf 293 SUPERFAMILY SSF88659 192 287 6.54E-14 T 25-04-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RJP_RS02200 f5641c5c23943fc19e41ab914b5267bf 293 Pfam PF04542 Sigma-70 region 2 53 121 9.2E-15 T 25-04-2016 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RJP_RS02200 f5641c5c23943fc19e41ab914b5267bf 293 Pfam PF00140 Sigma-70 factor, region 1.2 19 46 1.5E-5 T 25-04-2016 IPR009042 RNA polymerase sigma-70 region 1.2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RJP_RS02200 f5641c5c23943fc19e41ab914b5267bf 293 PRINTS PR00046 Major sigma-70 factor signature 77 90 3.5E-18 T 25-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RJP_RS02200 f5641c5c23943fc19e41ab914b5267bf 293 PRINTS PR00046 Major sigma-70 factor signature 270 281 3.5E-18 T 25-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RJP_RS02200 f5641c5c23943fc19e41ab914b5267bf 293 PRINTS PR00046 Major sigma-70 factor signature 255 270 3.5E-18 T 25-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RJP_RS02200 f5641c5c23943fc19e41ab914b5267bf 293 PRINTS PR00046 Major sigma-70 factor signature 236 248 3.5E-18 T 25-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RJP_RS02200 f5641c5c23943fc19e41ab914b5267bf 293 PRINTS PR00046 Major sigma-70 factor signature 101 109 3.5E-18 T 25-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RJP_RS02200 f5641c5c23943fc19e41ab914b5267bf 293 Gene3D G3DSA:1.10.10.10 226 285 9.2E-15 T 25-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RJP_RS02200 f5641c5c23943fc19e41ab914b5267bf 293 SUPERFAMILY SSF88946 12 121 3.61E-37 T 25-04-2016 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RJP_RS02860 e6ba774a147a4680baf570b0a5fbc57c 414 Gene3D G3DSA:1.20.1250.20 11 201 2.0E-15 T 25-04-2016 RJP_RS02860 e6ba774a147a4680baf570b0a5fbc57c 414 Pfam PF07690 Major Facilitator Superfamily 15 241 1.1E-13 T 25-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 RJP_RS02860 e6ba774a147a4680baf570b0a5fbc57c 414 PANTHER PTHR12778 15 406 1.5E-76 T 25-04-2016 RJP_RS02860 e6ba774a147a4680baf570b0a5fbc57c 414 Gene3D G3DSA:1.20.1250.20 226 410 2.1E-15 T 25-04-2016 RJP_RS02860 e6ba774a147a4680baf570b0a5fbc57c 414 SUPERFAMILY SSF103473 11 410 8.37E-37 T 25-04-2016 IPR020846 Major facilitator superfamily domain RJP_RS05855 353f195ebad02ac303b05ccdd7e2a86e 299 Pfam PF00571 CBS domain 150 196 5.1E-7 T 25-04-2016 IPR000644 CBS domain RJP_RS05855 353f195ebad02ac303b05ccdd7e2a86e 299 SUPERFAMILY SSF56176 210 291 5.45E-12 T 25-04-2016 IPR016166 FAD-binding, type 2 GO:0003824|GO:0016614|GO:0050660|GO:0055114 RJP_RS05855 353f195ebad02ac303b05ccdd7e2a86e 299 Gene3D G3DSA:3.30.465.10 191 292 2.2E-19 T 25-04-2016 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 GO:0050660 RJP_RS05855 353f195ebad02ac303b05ccdd7e2a86e 299 SUPERFAMILY SSF54631 64 199 5.86E-27 T 25-04-2016 RJP_RS05855 353f195ebad02ac303b05ccdd7e2a86e 299 SMART SM01091 213 294 2.7E-11 T 25-04-2016 IPR005170 Transporter-associated domain RJP_RS05855 353f195ebad02ac303b05ccdd7e2a86e 299 Pfam PF03471 Transporter associated domain 215 293 1.7E-12 T 25-04-2016 IPR005170 Transporter-associated domain RJP_RS05855 353f195ebad02ac303b05ccdd7e2a86e 299 PANTHER PTHR22777 60 295 9.0E-67 T 25-04-2016 RJP_RS05855 353f195ebad02ac303b05ccdd7e2a86e 299 Gene3D G3DSA:3.10.580.10 62 190 2.8E-16 T 25-04-2016 RJP_RS01670 e9147601c2e5ef30c65ef2a48e48fbf0 497 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 380 489 1.3E-23 T 25-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RJP_RS01670 e9147601c2e5ef30c65ef2a48e48fbf0 497 Pfam PF00512 His Kinase A (phospho-acceptor) domain 269 331 7.4E-19 T 25-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RJP_RS01670 e9147601c2e5ef30c65ef2a48e48fbf0 497 SMART SM00388 268 333 4.8E-21 T 25-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RJP_RS01670 e9147601c2e5ef30c65ef2a48e48fbf0 497 Gene3D G3DSA:3.30.565.10 319 490 8.0E-41 T 25-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RJP_RS01670 e9147601c2e5ef30c65ef2a48e48fbf0 497 PANTHER PTHR24423 247 488 2.3E-70 T 25-04-2016 RJP_RS01670 e9147601c2e5ef30c65ef2a48e48fbf0 497 PANTHER PTHR24423 10 20 2.3E-70 T 25-04-2016 RJP_RS01670 e9147601c2e5ef30c65ef2a48e48fbf0 497 PANTHER PTHR24423:SF374 247 488 2.3E-70 T 25-04-2016 RJP_RS01670 e9147601c2e5ef30c65ef2a48e48fbf0 497 PANTHER PTHR24423:SF374 10 20 2.3E-70 T 25-04-2016 RJP_RS01670 e9147601c2e5ef30c65ef2a48e48fbf0 497 SUPERFAMILY SSF55874 322 489 1.24E-39 T 25-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RJP_RS01670 e9147601c2e5ef30c65ef2a48e48fbf0 497 SMART SM00387 379 493 2.5E-33 T 25-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RJP_RS01670 e9147601c2e5ef30c65ef2a48e48fbf0 497 Gene3D G3DSA:1.10.287.130 261 318 4.8E-19 T 25-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RJP_RS01670 e9147601c2e5ef30c65ef2a48e48fbf0 497 SUPERFAMILY SSF47384 254 334 1.06E-19 T 25-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RJP_RS01670 e9147601c2e5ef30c65ef2a48e48fbf0 497 PRINTS PR00344 Bacterial sensor protein C-terminal signature 453 471 2.4E-10 T 25-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 RJP_RS01670 e9147601c2e5ef30c65ef2a48e48fbf0 497 PRINTS PR00344 Bacterial sensor protein C-terminal signature 418 432 2.4E-10 T 25-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 RJP_RS01670 e9147601c2e5ef30c65ef2a48e48fbf0 497 PRINTS PR00344 Bacterial sensor protein C-terminal signature 477 490 2.4E-10 T 25-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 RJP_RS06700 8dae8ba8f538d499f827d917f46bac2c 312 PIRSF PIRSF004930 1 312 1.3E-99 T 25-04-2016 IPR010923 tRNA threonylcarbamoyladenosine biosynthesis protein SUA5 RJP_RS06700 8dae8ba8f538d499f827d917f46bac2c 312 Pfam PF03481 Putative GTP-binding controlling metal-binding 189 310 2.5E-17 T 25-04-2016 IPR005145 Putative GTP-binding controlling metal-binding domain RJP_RS06700 8dae8ba8f538d499f827d917f46bac2c 312 Gene3D G3DSA:3.90.870.10 2 192 3.7E-62 T 25-04-2016 IPR017945 DHBP synthase RibB-like alpha/beta domain RJP_RS06700 8dae8ba8f538d499f827d917f46bac2c 312 Pfam PF01300 Telomere recombination 8 187 7.7E-49 T 25-04-2016 IPR006070 YrdC-like domain GO:0003725 RJP_RS06700 8dae8ba8f538d499f827d917f46bac2c 312 SUPERFAMILY SSF55821 2 193 1.8E-54 T 25-04-2016 IPR017945 DHBP synthase RibB-like alpha/beta domain RJP_RS06700 8dae8ba8f538d499f827d917f46bac2c 312 PANTHER PTHR17490:SF3 1 310 1.1E-76 T 25-04-2016 RJP_RS06700 8dae8ba8f538d499f827d917f46bac2c 312 PANTHER PTHR17490 1 310 1.1E-76 T 25-04-2016 RJP_RS06700 8dae8ba8f538d499f827d917f46bac2c 312 TIGRFAM TIGR00057 TIGR00057: tRNA threonylcarbamoyl adenosine modification protein, Sua5/YciO/YrdC/YwlC family 2 193 1.3E-51 T 25-04-2016 IPR006070 YrdC-like domain GO:0003725 RJP_RS02385 f8fe015f515690461371e6298f999948 98 PANTHER PTHR16821 1 95 3.1E-26 T 25-04-2016 IPR002908 Frataxin/CyaY GO:0008199|GO:0016226 RJP_RS02385 f8fe015f515690461371e6298f999948 98 Gene3D G3DSA:3.30.920.10 1 96 4.6E-29 T 25-04-2016 IPR002908 Frataxin/CyaY GO:0008199|GO:0016226 RJP_RS02385 f8fe015f515690461371e6298f999948 98 SMART SM01219 1 97 6.5E-33 T 25-04-2016 IPR002908 Frataxin/CyaY GO:0008199|GO:0016226 RJP_RS02385 f8fe015f515690461371e6298f999948 98 Pfam PF01491 Frataxin-like domain 1 95 1.2E-25 T 25-04-2016 IPR002908 Frataxin/CyaY GO:0008199|GO:0016226 RJP_RS02385 f8fe015f515690461371e6298f999948 98 SUPERFAMILY SSF55387 1 96 6.1E-29 T 25-04-2016 IPR002908 Frataxin/CyaY GO:0008199|GO:0016226 RJP_RS02385 f8fe015f515690461371e6298f999948 98 ProSitePatterns PS01344 Frataxin family signature. 49 63 - T 25-04-2016 IPR020895 Frataxin conserved site RJP_RS02385 f8fe015f515690461371e6298f999948 98 TIGRFAM TIGR03421 FeS_CyaY: iron donor protein CyaY 2 95 1.6E-25 T 25-04-2016 IPR002908 Frataxin/CyaY GO:0008199|GO:0016226 RJP_RS02385 f8fe015f515690461371e6298f999948 98 Hamap MF_00142 Protein CyaY [cyaY]. 1 98 17.131 T 25-04-2016 IPR002908 Frataxin/CyaY GO:0008199|GO:0016226 RJP_RS02790 2cbd9fac80f65134d39e67326a11eaa6 537 Pfam PF06418 CTP synthase N-terminus 4 265 5.2E-110 T 25-04-2016 IPR017456 CTP synthase, N-terminal GO:0003883|GO:0006221 KEGG: 00240+6.3.4.2|MetaCyc: PWY-7176|MetaCyc: PWY-7177|MetaCyc: PWY-7185|Reactome: REACT_1698|UniPathway: UPA00159 RJP_RS02790 2cbd9fac80f65134d39e67326a11eaa6 537 Hamap MF_01227 CTP synthase [pyrG]. 2 534 46.767 T 25-04-2016 IPR004468 CTP synthase GO:0003883|GO:0006221 KEGG: 00240+6.3.4.2|MetaCyc: PWY-7176|MetaCyc: PWY-7177|MetaCyc: PWY-7185|Reactome: REACT_1698|UniPathway: UPA00159 RJP_RS02790 2cbd9fac80f65134d39e67326a11eaa6 537 PANTHER PTHR11550 1 533 5.5E-271 T 25-04-2016 IPR004468 CTP synthase GO:0003883|GO:0006221 KEGG: 00240+6.3.4.2|MetaCyc: PWY-7176|MetaCyc: PWY-7177|MetaCyc: PWY-7185|Reactome: REACT_1698|UniPathway: UPA00159 RJP_RS02790 2cbd9fac80f65134d39e67326a11eaa6 537 Pfam PF00117 Glutamine amidotransferase class-I 300 529 2.0E-54 T 25-04-2016 IPR017926 Glutamine amidotransferase Reactome: REACT_1698 RJP_RS02790 2cbd9fac80f65134d39e67326a11eaa6 537 Gene3D G3DSA:3.40.50.300 2 283 2.2E-116 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RJP_RS02790 2cbd9fac80f65134d39e67326a11eaa6 537 TIGRFAM TIGR00337 PyrG: CTP synthase 2 529 3.3E-212 T 25-04-2016 IPR004468 CTP synthase GO:0003883|GO:0006221 KEGG: 00240+6.3.4.2|MetaCyc: PWY-7176|MetaCyc: PWY-7177|MetaCyc: PWY-7185|Reactome: REACT_1698|UniPathway: UPA00159 RJP_RS02790 2cbd9fac80f65134d39e67326a11eaa6 537 SUPERFAMILY SSF52540 1 267 1.36E-110 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RJP_RS02790 2cbd9fac80f65134d39e67326a11eaa6 537 Gene3D G3DSA:3.40.50.880 286 535 6.2E-93 T 25-04-2016 IPR029062 Class I glutamine amidotransferase-like RJP_RS02790 2cbd9fac80f65134d39e67326a11eaa6 537 SUPERFAMILY SSF52317 288 534 1.28E-68 T 25-04-2016 IPR029062 Class I glutamine amidotransferase-like RJP_RS01450 46b912fb389ac24d3edf8e346227f134 96 SUPERFAMILY SSF118215 16 94 7.45E-8 T 25-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 RJP_RS01450 46b912fb389ac24d3edf8e346227f134 96 Gene3D G3DSA:1.10.3860.10 16 94 2.2E-5 T 25-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 RJP_RS01450 46b912fb389ac24d3edf8e346227f134 96 Pfam PF00375 Sodium:dicarboxylate symporter family 13 88 4.2E-7 T 25-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 RJP_RS05225 211706369b04b9de0dfb8f5c94e196e1 207 Pfam PF00573 Ribosomal protein L4/L1 family 16 205 8.4E-58 T 25-04-2016 IPR002136 Ribosomal protein L4/L1e GO:0003735|GO:0005840|GO:0006412 RJP_RS05225 211706369b04b9de0dfb8f5c94e196e1 207 TIGRFAM TIGR03953 rplD_bact: 50S ribosomal protein uL4 16 204 3.7E-66 T 25-04-2016 IPR013005 50S ribosomal protein uL4 RJP_RS05225 211706369b04b9de0dfb8f5c94e196e1 207 PANTHER PTHR10746 5 206 1.2E-85 T 25-04-2016 IPR013005 50S ribosomal protein uL4 RJP_RS05225 211706369b04b9de0dfb8f5c94e196e1 207 Hamap MF_01328_B 50S ribosomal protein L4 [rplD]. 8 207 29.734 T 25-04-2016 IPR013005 50S ribosomal protein uL4 RJP_RS05225 211706369b04b9de0dfb8f5c94e196e1 207 SUPERFAMILY SSF52166 1 206 4.32E-65 T 25-04-2016 IPR023574 Ribosomal protein L4 domain GO:0003735|GO:0005840|GO:0006412 RJP_RS05225 211706369b04b9de0dfb8f5c94e196e1 207 Gene3D G3DSA:3.40.1370.10 59 206 5.6E-54 T 25-04-2016 IPR023574 Ribosomal protein L4 domain GO:0003735|GO:0005840|GO:0006412 RJP_RS01835 7e4e8154b996e45585b71ae89140e24e 690 Gene3D G3DSA:2.40.50.140 162 204 2.2E-32 T 25-04-2016 IPR012340 Nucleic acid-binding, OB-fold RJP_RS01835 7e4e8154b996e45585b71ae89140e24e 690 Gene3D G3DSA:2.40.50.140 35 84 2.2E-32 T 25-04-2016 IPR012340 Nucleic acid-binding, OB-fold RJP_RS01835 7e4e8154b996e45585b71ae89140e24e 690 SMART SM00316 39 129 9.7E-4 T 25-04-2016 IPR022967 RNA-binding domain, S1 RJP_RS01835 7e4e8154b996e45585b71ae89140e24e 690 Pfam PF10150 Ribonuclease E/G family 200 472 8.9E-91 T 25-04-2016 IPR019307 RNA-binding protein AU-1/Ribonuclease E/G GO:0003723 RJP_RS01835 7e4e8154b996e45585b71ae89140e24e 690 SUPERFAMILY SSF50249 41 82 1.51E-15 T 25-04-2016 IPR012340 Nucleic acid-binding, OB-fold RJP_RS01835 7e4e8154b996e45585b71ae89140e24e 690 SUPERFAMILY SSF50249 160 203 1.51E-15 T 25-04-2016 IPR012340 Nucleic acid-binding, OB-fold RJP_RS01835 7e4e8154b996e45585b71ae89140e24e 690 PANTHER PTHR30001 1 679 7.7E-170 T 25-04-2016 RJP_RS01835 7e4e8154b996e45585b71ae89140e24e 690 PANTHER PTHR30001:SF1 1 679 7.7E-170 T 25-04-2016 RJP_RS01835 7e4e8154b996e45585b71ae89140e24e 690 Pfam PF00575 S1 RNA binding domain 38 78 1.1E-4 T 25-04-2016 IPR003029 S1 domain GO:0003676 RJP_RS01835 7e4e8154b996e45585b71ae89140e24e 690 TIGRFAM TIGR00757 RNaseEG: ribonuclease, Rne/Rng family 14 506 7.2E-176 T 25-04-2016 IPR004659 Ribonuclease E/G GO:0003723|GO:0004540|GO:0006396 RJP_RS05730 c8d19808d274b673c7a7ba54b3da7dc6 159 SUPERFAMILY SSF101738 3 114 7.32E-36 T 25-04-2016 IPR007481 Stringent starvation protein B RJP_RS05730 c8d19808d274b673c7a7ba54b3da7dc6 159 Gene3D G3DSA:2.30.30.220 2 114 4.1E-41 T 25-04-2016 IPR007481 Stringent starvation protein B RJP_RS05730 c8d19808d274b673c7a7ba54b3da7dc6 159 Pfam PF04386 Stringent starvation protein B 9 137 9.8E-29 T 25-04-2016 IPR007481 Stringent starvation protein B RJP_RS05200 ec76de58768dc96f001547f2ce3708c9 217 Hamap MF_01309_B 30S ribosomal protein S3 [rpsC]. 1 209 34.656 T 25-04-2016 IPR005704 Ribosomal protein S3, bacterial GO:0003735|GO:0006412|GO:0015935 RJP_RS05200 ec76de58768dc96f001547f2ce3708c9 217 SUPERFAMILY SSF54814 2 109 9.68E-25 T 25-04-2016 IPR009019 K homology domain, prokaryotic type GO:0003723 RJP_RS05200 ec76de58768dc96f001547f2ce3708c9 217 Gene3D G3DSA:3.30.1140.32 113 209 5.6E-43 T 25-04-2016 IPR001351 Ribosomal protein S3, C-terminal GO:0003735|GO:0005840|GO:0006412 RJP_RS05200 ec76de58768dc96f001547f2ce3708c9 217 PANTHER PTHR11760 2 209 2.5E-100 T 25-04-2016 RJP_RS05200 ec76de58768dc96f001547f2ce3708c9 217 SUPERFAMILY SSF54821 111 209 2.75E-38 T 25-04-2016 IPR001351 Ribosomal protein S3, C-terminal GO:0003735|GO:0005840|GO:0006412 RJP_RS05200 ec76de58768dc96f001547f2ce3708c9 217 SMART SM00322 62 128 3.7E-4 T 25-04-2016 IPR004087 K Homology domain GO:0003676 RJP_RS05200 ec76de58768dc96f001547f2ce3708c9 217 Gene3D G3DSA:3.30.300.20 20 110 3.8E-24 T 25-04-2016 IPR015946 K homology domain-like, alpha/beta RJP_RS05200 ec76de58768dc96f001547f2ce3708c9 217 ProSitePatterns PS00548 Ribosomal protein S3 signature. 166 200 - T 25-04-2016 IPR018280 Ribosomal protein S3, conserved site RJP_RS05200 ec76de58768dc96f001547f2ce3708c9 217 Pfam PF00189 Ribosomal protein S3, C-terminal domain 123 205 6.1E-38 T 25-04-2016 RJP_RS05200 ec76de58768dc96f001547f2ce3708c9 217 PANTHER PTHR11760:SF19 2 209 2.5E-100 T 25-04-2016 RJP_RS05200 ec76de58768dc96f001547f2ce3708c9 217 TIGRFAM TIGR01009 rpsC_bact: ribosomal protein uS3 1 213 2.4E-91 T 25-04-2016 IPR005704 Ribosomal protein S3, bacterial GO:0003735|GO:0006412|GO:0015935 RJP_RS05200 ec76de58768dc96f001547f2ce3708c9 217 Pfam PF07650 KH domain 39 111 2.6E-16 T 25-04-2016 IPR004044 K Homology domain, type 2 GO:0003723 RJP_RS05045 0b736993fabbdb67a4813da6683e8a97 555 PANTHER PTHR11206 265 507 4.0E-58 T 25-04-2016 RJP_RS05045 0b736993fabbdb67a4813da6683e8a97 555 PIRSF PIRSF002869 46 555 1.4E-174 T 25-04-2016 IPR004268 Peptidoglycan biosynthesis protein MurJ RJP_RS05045 0b736993fabbdb67a4813da6683e8a97 555 PANTHER PTHR11206 117 129 4.0E-58 T 25-04-2016 RJP_RS05045 0b736993fabbdb67a4813da6683e8a97 555 PANTHER PTHR11206 165 170 4.0E-58 T 25-04-2016 RJP_RS05045 0b736993fabbdb67a4813da6683e8a97 555 PANTHER PTHR11206:SF90 265 507 4.0E-58 T 25-04-2016 RJP_RS05045 0b736993fabbdb67a4813da6683e8a97 555 PANTHER PTHR11206:SF90 117 129 4.0E-58 T 25-04-2016 RJP_RS05045 0b736993fabbdb67a4813da6683e8a97 555 Pfam PF03023 MviN-like protein 76 523 5.9E-147 T 25-04-2016 IPR004268 Peptidoglycan biosynthesis protein MurJ RJP_RS05045 0b736993fabbdb67a4813da6683e8a97 555 PRINTS PR01806 Virulence factor MviN signature 100 116 1.5E-70 T 25-04-2016 IPR004268 Peptidoglycan biosynthesis protein MurJ RJP_RS05045 0b736993fabbdb67a4813da6683e8a97 555 PRINTS PR01806 Virulence factor MviN signature 204 225 1.5E-70 T 25-04-2016 IPR004268 Peptidoglycan biosynthesis protein MurJ RJP_RS05045 0b736993fabbdb67a4813da6683e8a97 555 PRINTS PR01806 Virulence factor MviN signature 81 100 1.5E-70 T 25-04-2016 IPR004268 Peptidoglycan biosynthesis protein MurJ RJP_RS05045 0b736993fabbdb67a4813da6683e8a97 555 PRINTS PR01806 Virulence factor MviN signature 180 204 1.5E-70 T 25-04-2016 IPR004268 Peptidoglycan biosynthesis protein MurJ RJP_RS05045 0b736993fabbdb67a4813da6683e8a97 555 PRINTS PR01806 Virulence factor MviN signature 454 471 1.5E-70 T 25-04-2016 IPR004268 Peptidoglycan biosynthesis protein MurJ RJP_RS05045 0b736993fabbdb67a4813da6683e8a97 555 PRINTS PR01806 Virulence factor MviN signature 304 330 1.5E-70 T 25-04-2016 IPR004268 Peptidoglycan biosynthesis protein MurJ RJP_RS05045 0b736993fabbdb67a4813da6683e8a97 555 PRINTS PR01806 Virulence factor MviN signature 402 421 1.5E-70 T 25-04-2016 IPR004268 Peptidoglycan biosynthesis protein MurJ RJP_RS05045 0b736993fabbdb67a4813da6683e8a97 555 TIGRFAM TIGR01045 RPE1: rickettsial palindromic element RPE1 domain 4 48 1.7E-19 T 25-04-2016 IPR005728 Rickettsial palindromic element RJP_RS05045 0b736993fabbdb67a4813da6683e8a97 555 TIGRFAM TIGR01695 murJ_mviN: murein biosynthesis integral membrane protein MurJ 51 547 1.5E-123 T 25-04-2016 IPR004268 Peptidoglycan biosynthesis protein MurJ RJP_RS05045 0b736993fabbdb67a4813da6683e8a97 555 PANTHER PTHR11206:SF90 165 170 4.0E-58 T 25-04-2016 RJP_RS01640 7dc3a4b93f3f2ce657f188f48a863fcb 458 PANTHER PTHR30026:SF3 1 453 9.6E-57 T 25-04-2016 IPR010130 Type I secretion outer membrane protein, TolC GO:0006810|GO:0019867 RJP_RS01640 7dc3a4b93f3f2ce657f188f48a863fcb 458 Pfam PF02321 Outer membrane efflux protein 234 427 1.2E-26 T 25-04-2016 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 RJP_RS01640 7dc3a4b93f3f2ce657f188f48a863fcb 458 Pfam PF02321 Outer membrane efflux protein 22 213 3.6E-18 T 25-04-2016 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 RJP_RS01640 7dc3a4b93f3f2ce657f188f48a863fcb 458 PANTHER PTHR30026 1 453 9.6E-57 T 25-04-2016 RJP_RS01640 7dc3a4b93f3f2ce657f188f48a863fcb 458 Gene3D G3DSA:1.20.1600.10 19 430 2.0E-63 T 25-04-2016 RJP_RS01640 7dc3a4b93f3f2ce657f188f48a863fcb 458 SUPERFAMILY SSF56954 1 429 5.75E-66 T 25-04-2016 RJP_RS02700 973e48cf67c28bb6570762231896eed2 122 SUPERFAMILY SSF48403 78 122 9.7E-5 T 25-04-2016 IPR020683 Ankyrin repeat-containing domain RJP_RS02700 973e48cf67c28bb6570762231896eed2 122 Gene3D G3DSA:1.25.40.20 87 121 1.3E-4 T 25-04-2016 IPR020683 Ankyrin repeat-containing domain RJP_RS01790 7a08a20a3cc65210d525e3427655ef4c 295 Hamap MF_00037 UDP-N-acetylenolpyruvoylglucosamine reductase [murB]. 1 295 86.315 T 25-04-2016 IPR003170 UDP-N-acetylenolpyruvoylglucosamine reductase GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 RJP_RS01790 7a08a20a3cc65210d525e3427655ef4c 295 PANTHER PTHR21071:SF4 2 294 2.7E-102 T 25-04-2016 RJP_RS01790 7a08a20a3cc65210d525e3427655ef4c 295 PANTHER PTHR21071 2 294 2.7E-102 T 25-04-2016 IPR003170 UDP-N-acetylenolpyruvoylglucosamine reductase GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 RJP_RS01790 7a08a20a3cc65210d525e3427655ef4c 295 TIGRFAM TIGR00179 murB: UDP-N-acetylenolpyruvoylglucosamine reductase 18 292 8.1E-61 T 25-04-2016 IPR003170 UDP-N-acetylenolpyruvoylglucosamine reductase GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 RJP_RS01790 7a08a20a3cc65210d525e3427655ef4c 295 Pfam PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain 195 290 1.5E-25 T 25-04-2016 IPR011601 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 RJP_RS01790 7a08a20a3cc65210d525e3427655ef4c 295 SUPERFAMILY SSF56194 189 293 5.62E-35 T 25-04-2016 IPR011601 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 RJP_RS01790 7a08a20a3cc65210d525e3427655ef4c 295 SUPERFAMILY SSF56176 15 202 2.18E-43 T 25-04-2016 IPR016166 FAD-binding, type 2 GO:0003824|GO:0016614|GO:0050660|GO:0055114 RJP_RS01790 7a08a20a3cc65210d525e3427655ef4c 295 Gene3D G3DSA:3.30.465.10 82 219 6.7E-38 T 25-04-2016 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 GO:0050660 RJP_RS01790 7a08a20a3cc65210d525e3427655ef4c 295 Gene3D G3DSA:3.90.78.10 220 293 4.8E-29 T 25-04-2016 IPR011601 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 RJP_RS01790 7a08a20a3cc65210d525e3427655ef4c 295 Gene3D G3DSA:3.30.43.10 8 79 2.7E-17 T 25-04-2016 IPR016167 FAD-binding, type 2, subdomain 1 GO:0003824|GO:0050660|GO:0055114 RJP_RS01790 7a08a20a3cc65210d525e3427655ef4c 295 Pfam PF01565 FAD binding domain 34 158 2.7E-17 T 25-04-2016 IPR006094 FAD linked oxidase, N-terminal GO:0016491|GO:0050660|GO:0055114 RJP_RS04910 f0c9c7bbf141cbc5d727b5c294e9ac92 365 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 88 106 8.6E-35 T 25-04-2016 IPR006073 GTP binding domain GO:0005525 RJP_RS04910 f0c9c7bbf141cbc5d727b5c294e9ac92 365 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 71 86 8.6E-35 T 25-04-2016 IPR006073 GTP binding domain GO:0005525 RJP_RS04910 f0c9c7bbf141cbc5d727b5c294e9ac92 365 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 27 45 8.6E-35 T 25-04-2016 IPR006073 GTP binding domain GO:0005525 RJP_RS04910 f0c9c7bbf141cbc5d727b5c294e9ac92 365 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 5 25 8.6E-35 T 25-04-2016 IPR006073 GTP binding domain GO:0005525 RJP_RS04910 f0c9c7bbf141cbc5d727b5c294e9ac92 365 PIRSF PIRSF006641 1 365 3.8E-160 T 25-04-2016 IPR004396 Ribosome-binding ATPase YchF/Obg-like ATPase 1 GO:0005525 RJP_RS04910 f0c9c7bbf141cbc5d727b5c294e9ac92 365 TIGRFAM TIGR00092 TIGR00092: GTP-binding protein YchF 1 365 6.5E-142 T 25-04-2016 IPR004396 Ribosome-binding ATPase YchF/Obg-like ATPase 1 GO:0005525 RJP_RS04910 f0c9c7bbf141cbc5d727b5c294e9ac92 365 PANTHER PTHR23305 1 365 7.9E-193 T 25-04-2016 RJP_RS04910 f0c9c7bbf141cbc5d727b5c294e9ac92 365 Hamap MF_00944 Ribosome-binding ATPase YchF [ychF]. 2 365 41.59 T 25-04-2016 IPR004396 Ribosome-binding ATPase YchF/Obg-like ATPase 1 GO:0005525 RJP_RS04910 f0c9c7bbf141cbc5d727b5c294e9ac92 365 Pfam PF01926 50S ribosome-binding GTPase 5 123 6.3E-23 T 25-04-2016 IPR006073 GTP binding domain GO:0005525 RJP_RS04910 f0c9c7bbf141cbc5d727b5c294e9ac92 365 Gene3D G3DSA:3.40.50.300 201 266 1.8E-43 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RJP_RS04910 f0c9c7bbf141cbc5d727b5c294e9ac92 365 Gene3D G3DSA:3.40.50.300 4 131 1.8E-43 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RJP_RS04910 f0c9c7bbf141cbc5d727b5c294e9ac92 365 Gene3D G3DSA:1.10.150.300 132 200 1.3E-20 T 25-04-2016 IPR023192 TGS-like domain RJP_RS04910 f0c9c7bbf141cbc5d727b5c294e9ac92 365 SUPERFAMILY SSF81271 281 362 1.77E-34 T 25-04-2016 IPR012676 TGS-like KEGG: 00970+6.1.1.3 RJP_RS04910 f0c9c7bbf141cbc5d727b5c294e9ac92 365 SUPERFAMILY SSF52540 3 301 4.97E-76 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RJP_RS04910 f0c9c7bbf141cbc5d727b5c294e9ac92 365 Gene3D G3DSA:3.10.20.30 267 365 3.0E-45 T 25-04-2016 IPR012675 Beta-grasp domain RJP_RS04910 f0c9c7bbf141cbc5d727b5c294e9ac92 365 Pfam PF06071 Protein of unknown function (DUF933) 281 364 3.8E-38 T 25-04-2016 IPR013029 Domain of unknown function DUF933 RJP_RS04910 f0c9c7bbf141cbc5d727b5c294e9ac92 365 PANTHER PTHR23305:SF12 1 365 7.9E-193 T 25-04-2016 RJP_RS00565 50d8a35f0971e5b56532652cd75c7d86 737 Gene3D G3DSA:3.30.1360.40 235 331 5.9E-29 T 25-04-2016 IPR024946 Arginine repressor C-terminal-like domain RJP_RS00565 50d8a35f0971e5b56532652cd75c7d86 737 SUPERFAMILY SSF101904 507 735 4.58E-43 T 25-04-2016 RJP_RS00565 50d8a35f0971e5b56532652cd75c7d86 737 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 647 682 0.0024 T 25-04-2016 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal beta-pinwheel GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 RJP_RS00565 50d8a35f0971e5b56532652cd75c7d86 737 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 601 645 0.025 T 25-04-2016 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal beta-pinwheel GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 RJP_RS00565 50d8a35f0971e5b56532652cd75c7d86 737 SMART SM00434 9 461 1.8E-254 T 25-04-2016 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 RJP_RS00565 50d8a35f0971e5b56532652cd75c7d86 737 Hamap MF_00936 DNA topoisomerase 4 subunit A [parC]. 2 736 32.348 T 25-04-2016 IPR005742 DNA topoisomerase IV, subunit A, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 RJP_RS00565 50d8a35f0971e5b56532652cd75c7d86 737 SUPERFAMILY SSF56719 29 476 7.46E-163 T 25-04-2016 IPR013760 DNA topoisomerase, type IIA-like domain GO:0003918|GO:0005524 RJP_RS00565 50d8a35f0971e5b56532652cd75c7d86 737 PANTHER PTHR10169 2 609 9.2E-204 T 25-04-2016 RJP_RS00565 50d8a35f0971e5b56532652cd75c7d86 737 Gene3D G3DSA:3.90.199.10 29 233 5.2E-114 T 25-04-2016 IPR013758 DNA topoisomerase, type IIA, subunit A/ C-terminal, alpha-beta GO:0003677|GO:0003918|GO:0005524|GO:0006259|GO:0006265 RJP_RS00565 50d8a35f0971e5b56532652cd75c7d86 737 Gene3D G3DSA:3.90.199.10 333 398 5.2E-114 T 25-04-2016 IPR013758 DNA topoisomerase, type IIA, subunit A/ C-terminal, alpha-beta GO:0003677|GO:0003918|GO:0005524|GO:0006259|GO:0006265 RJP_RS00565 50d8a35f0971e5b56532652cd75c7d86 737 Pfam PF00521 DNA gyrase/topoisomerase IV, subunit A 30 467 9.7E-148 T 25-04-2016 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 RJP_RS00565 50d8a35f0971e5b56532652cd75c7d86 737 Gene3D G3DSA:2.120.10.90 503 722 5.7E-26 T 25-04-2016 RJP_RS00565 50d8a35f0971e5b56532652cd75c7d86 737 PANTHER PTHR10169:SF48 2 609 9.2E-204 T 25-04-2016 RJP_RS00565 50d8a35f0971e5b56532652cd75c7d86 737 TIGRFAM TIGR01062 parC_Gneg: DNA topoisomerase IV, A subunit 6 736 0.0 T 25-04-2016 RJP_RS03445 4f68716fb7a8025d8561473afaac2b04 327 PANTHER PTHR23409:SF18 12 325 1.0E-62 T 25-04-2016 RJP_RS03445 4f68716fb7a8025d8561473afaac2b04 327 Gene3D G3DSA:1.10.620.20 10 289 4.5E-99 T 25-04-2016 IPR012348 Ribonucleotide reductase-related GO:0016491|GO:0055114 Reactome: REACT_1698 RJP_RS03445 4f68716fb7a8025d8561473afaac2b04 327 SUPERFAMILY SSF47240 10 318 2.36E-87 T 25-04-2016 IPR009078 Ferritin-like superfamily RJP_RS03445 4f68716fb7a8025d8561473afaac2b04 327 Pfam PF00268 Ribonucleotide reductase, small chain 10 281 8.1E-72 T 25-04-2016 IPR000358 Ribonucleotide reductase small subunit GO:0009186|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: REACT_1698|UniPathway: UPA00326 RJP_RS03445 4f68716fb7a8025d8561473afaac2b04 327 PANTHER PTHR23409 12 325 1.0E-62 T 25-04-2016 IPR000358 Ribonucleotide reductase small subunit GO:0009186|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: REACT_1698|UniPathway: UPA00326 RJP_RS03445 4f68716fb7a8025d8561473afaac2b04 327 PIRSF PIRSF000355 4 317 2.5E-103 T 25-04-2016 IPR000358 Ribonucleotide reductase small subunit GO:0009186|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: REACT_1698|UniPathway: UPA00326 RJP_RS04205 838deea2e833e5c75ee07e7e2c661628 444 SMART SM00382 81 237 5.6E-9 T 25-04-2016 IPR003593 AAA+ ATPase domain RJP_RS04205 838deea2e833e5c75ee07e7e2c661628 444 PANTHER PTHR32472:SF10 2 418 3.0E-166 T 25-04-2016 RJP_RS04205 838deea2e833e5c75ee07e7e2c661628 444 SUPERFAMILY SSF54211 296 421 4.93E-31 T 25-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold RJP_RS04205 838deea2e833e5c75ee07e7e2c661628 444 SUPERFAMILY SSF54211 248 262 4.93E-31 T 25-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold RJP_RS04205 838deea2e833e5c75ee07e7e2c661628 444 Pfam PF13541 Subunit ChlI of Mg-chelatase 353 421 3.2E-7 T 25-04-2016 RJP_RS04205 838deea2e833e5c75ee07e7e2c661628 444 Gene3D G3DSA:3.30.230.10 277 422 2.4E-26 T 25-04-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup RJP_RS04205 838deea2e833e5c75ee07e7e2c661628 444 TIGRFAM TIGR00416 sms: DNA repair protein RadA 2 421 2.3E-158 T 25-04-2016 IPR004504 DNA repair protein RadA GO:0003684|GO:0005524|GO:0006281 RJP_RS04205 838deea2e833e5c75ee07e7e2c661628 444 SUPERFAMILY SSF52540 61 284 9.25E-47 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RJP_RS04205 838deea2e833e5c75ee07e7e2c661628 444 Pfam PF13481 AAA domain 63 215 4.3E-13 T 25-04-2016 RJP_RS04205 838deea2e833e5c75ee07e7e2c661628 444 Gene3D G3DSA:3.40.50.300 62 269 4.6E-46 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RJP_RS04205 838deea2e833e5c75ee07e7e2c661628 444 PRINTS PR01874 DNA repair protein radA signature 206 234 7.8E-89 T 25-04-2016 RJP_RS04205 838deea2e833e5c75ee07e7e2c661628 444 PRINTS PR01874 DNA repair protein radA signature 241 267 7.8E-89 T 25-04-2016 RJP_RS04205 838deea2e833e5c75ee07e7e2c661628 444 PRINTS PR01874 DNA repair protein radA signature 315 338 7.8E-89 T 25-04-2016 RJP_RS04205 838deea2e833e5c75ee07e7e2c661628 444 PRINTS PR01874 DNA repair protein radA signature 73 101 7.8E-89 T 25-04-2016 RJP_RS04205 838deea2e833e5c75ee07e7e2c661628 444 PRINTS PR01874 DNA repair protein radA signature 167 191 7.8E-89 T 25-04-2016 RJP_RS04205 838deea2e833e5c75ee07e7e2c661628 444 PRINTS PR01874 DNA repair protein radA signature 8 32 7.8E-89 T 25-04-2016 RJP_RS04205 838deea2e833e5c75ee07e7e2c661628 444 PRINTS PR01874 DNA repair protein radA signature 115 132 7.8E-89 T 25-04-2016 RJP_RS04205 838deea2e833e5c75ee07e7e2c661628 444 PANTHER PTHR32472 2 418 3.0E-166 T 25-04-2016 RJP_RS05255 715fb4a9b69153bb9f7193f8f34c14c0 240 SMART SM00967 13 83 8.8E-11 T 25-04-2016 IPR013123 RNA 2-O ribose methyltransferase, substrate binding GO:0008168 RJP_RS05255 715fb4a9b69153bb9f7193f8f34c14c0 240 SUPERFAMILY SSF55315 8 79 5.53E-12 T 25-04-2016 IPR029064 50S ribosomal protein L30e-like RJP_RS05255 715fb4a9b69153bb9f7193f8f34c14c0 240 PANTHER PTHR12029 15 238 7.5E-58 T 25-04-2016 RJP_RS05255 715fb4a9b69153bb9f7193f8f34c14c0 240 Gene3D G3DSA:3.40.1280.10 97 238 2.7E-43 T 25-04-2016 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal RJP_RS05255 715fb4a9b69153bb9f7193f8f34c14c0 240 Pfam PF08032 RNA 2'-O ribose methyltransferase substrate binding 13 79 1.7E-11 T 25-04-2016 IPR013123 RNA 2-O ribose methyltransferase, substrate binding GO:0008168 RJP_RS05255 715fb4a9b69153bb9f7193f8f34c14c0 240 TIGRFAM TIGR00186 rRNA_methyl_3: RNA methyltransferase, TrmH family, group 3 13 237 2.0E-57 T 25-04-2016 IPR004441 RNA methyltransferase TrmH family GO:0006396|GO:0008173 RJP_RS05255 715fb4a9b69153bb9f7193f8f34c14c0 240 SUPERFAMILY SSF75217 71 239 7.33E-41 T 25-04-2016 IPR029028 Alpha/beta knot methyltransferases RJP_RS05255 715fb4a9b69153bb9f7193f8f34c14c0 240 Pfam PF00588 SpoU rRNA Methylase family 98 235 7.2E-37 T 25-04-2016 IPR001537 tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008173 RJP_RS05255 715fb4a9b69153bb9f7193f8f34c14c0 240 Gene3D G3DSA:3.30.1330.30 13 79 8.8E-9 T 25-04-2016 IPR029064 50S ribosomal protein L30e-like RJP_RS04185 1c4172a6c13399f39c9d8ce9d850dee5 86 PANTHER PTHR32195 4 63 4.7E-14 T 25-04-2016 RJP_RS04185 1c4172a6c13399f39c9d8ce9d850dee5 86 Pfam PF03222 Tryptophan/tyrosine permease family 5 67 9.9E-16 T 25-04-2016 IPR018227 Tryptophan/tyrosine permease GO:0003333 RJP_RS04185 1c4172a6c13399f39c9d8ce9d850dee5 86 PANTHER PTHR32195:SF17 4 63 4.7E-14 T 25-04-2016 RJP_RS03905 d16905a6606d3f2bff502f55c3ad1aa5 351 PIRSF PIRSF001438 1 351 1.0E-113 T 25-04-2016 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 RJP_RS03905 d16905a6606d3f2bff502f55c3ad1aa5 351 SUPERFAMILY SSF54782 220 257 9.02E-9 T 25-04-2016 IPR022418 Porphobilinogen deaminase, C-terminal GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 RJP_RS03905 d16905a6606d3f2bff502f55c3ad1aa5 351 Gene3D G3DSA:3.30.160.40 307 348 2.1E-10 T 25-04-2016 IPR022418 Porphobilinogen deaminase, C-terminal GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 RJP_RS03905 d16905a6606d3f2bff502f55c3ad1aa5 351 Gene3D G3DSA:3.30.160.40 228 255 2.1E-10 T 25-04-2016 IPR022418 Porphobilinogen deaminase, C-terminal GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 RJP_RS03905 d16905a6606d3f2bff502f55c3ad1aa5 351 PANTHER PTHR11557 308 348 2.4E-117 T 25-04-2016 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 RJP_RS03905 d16905a6606d3f2bff502f55c3ad1aa5 351 PANTHER PTHR11557 5 258 2.4E-117 T 25-04-2016 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 RJP_RS03905 d16905a6606d3f2bff502f55c3ad1aa5 351 ProSitePatterns PS00533 Porphobilinogen deaminase cofactor-binding site. 231 247 - T 25-04-2016 IPR022419 Porphobilinogen deaminase, dipyrromethane cofactor binding site GO:0004418|GO:0018160|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 RJP_RS03905 d16905a6606d3f2bff502f55c3ad1aa5 351 Gene3D G3DSA:3.40.190.10 2 109 3.4E-44 T 25-04-2016 RJP_RS03905 d16905a6606d3f2bff502f55c3ad1aa5 351 PRINTS PR00151 Porphobilinogen deaminase signature 230 247 3.3E-34 T 25-04-2016 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 RJP_RS03905 d16905a6606d3f2bff502f55c3ad1aa5 351 PRINTS PR00151 Porphobilinogen deaminase signature 123 140 3.3E-34 T 25-04-2016 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 RJP_RS03905 d16905a6606d3f2bff502f55c3ad1aa5 351 PRINTS PR00151 Porphobilinogen deaminase signature 75 94 3.3E-34 T 25-04-2016 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 RJP_RS03905 d16905a6606d3f2bff502f55c3ad1aa5 351 PRINTS PR00151 Porphobilinogen deaminase signature 142 159 3.3E-34 T 25-04-2016 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 RJP_RS03905 d16905a6606d3f2bff502f55c3ad1aa5 351 PRINTS PR00151 Porphobilinogen deaminase signature 44 64 3.3E-34 T 25-04-2016 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 RJP_RS03905 d16905a6606d3f2bff502f55c3ad1aa5 351 Hamap MF_00260 Porphobilinogen deaminase [hemC]. 4 348 33.828 T 25-04-2016 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 RJP_RS03905 d16905a6606d3f2bff502f55c3ad1aa5 351 TIGRFAM TIGR00212 hemC: hydroxymethylbilane synthase 5 260 1.2E-106 T 25-04-2016 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 RJP_RS03905 d16905a6606d3f2bff502f55c3ad1aa5 351 SUPERFAMILY SSF53850 4 218 1.81E-75 T 25-04-2016 RJP_RS03905 d16905a6606d3f2bff502f55c3ad1aa5 351 TIGRFAM TIGR01045 RPE1: rickettsial palindromic element RPE1 domain 258 306 8.8E-24 T 25-04-2016 IPR005728 Rickettsial palindromic element RJP_RS03905 d16905a6606d3f2bff502f55c3ad1aa5 351 Pfam PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain 5 212 2.5E-71 T 25-04-2016 IPR022417 Porphobilinogen deaminase, N-terminal GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 RJP_RS03905 d16905a6606d3f2bff502f55c3ad1aa5 351 Pfam PF03900 Porphobilinogen deaminase, C-terminal domain 228 255 1.9E-7 T 25-04-2016 IPR022418 Porphobilinogen deaminase, C-terminal GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 RJP_RS03905 d16905a6606d3f2bff502f55c3ad1aa5 351 Gene3D G3DSA:3.40.190.10 110 199 6.5E-31 T 25-04-2016 RJP_RS03575 b487e07949506c002271cab716fe540a 426 PIRSF PIRSF001563 7 426 6.2E-108 T 25-04-2016 IPR001645 Folylpolyglutamate synthetase GO:0004326|GO:0005524|GO:0009396 KEGG: 00790+6.3.2.17|MetaCyc: PWY-2161|UniPathway: UPA00850 RJP_RS03575 b487e07949506c002271cab716fe540a 426 Gene3D G3DSA:3.40.1190.10 10 285 1.3E-84 T 25-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 RJP_RS03575 b487e07949506c002271cab716fe540a 426 Gene3D G3DSA:3.90.190.20 301 426 4.6E-19 T 25-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 RJP_RS03575 b487e07949506c002271cab716fe540a 426 TIGRFAM TIGR01499 folC: bifunctional protein FolC 19 426 3.9E-124 T 25-04-2016 IPR001645 Folylpolyglutamate synthetase GO:0004326|GO:0005524|GO:0009396 KEGG: 00790+6.3.2.17|MetaCyc: PWY-2161|UniPathway: UPA00850 RJP_RS03575 b487e07949506c002271cab716fe540a 426 ProSitePatterns PS01012 Folylpolyglutamate synthase signature 2. 134 149 - T 25-04-2016 IPR018109 Folylpolyglutamate synthetase, conserved site GO:0004326|GO:0005524|GO:0009396 RJP_RS03575 b487e07949506c002271cab716fe540a 426 PANTHER PTHR11136 12 426 2.1E-109 T 25-04-2016 IPR001645 Folylpolyglutamate synthetase GO:0004326|GO:0005524|GO:0009396 KEGG: 00790+6.3.2.17|MetaCyc: PWY-2161|UniPathway: UPA00850 RJP_RS03575 b487e07949506c002271cab716fe540a 426 SUPERFAMILY SSF53244 302 426 4.35E-18 T 25-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 RJP_RS03575 b487e07949506c002271cab716fe540a 426 Pfam PF08245 Mur ligase middle domain 42 260 2.5E-8 T 25-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 RJP_RS03575 b487e07949506c002271cab716fe540a 426 PANTHER PTHR11136:SF0 12 426 2.1E-109 T 25-04-2016 RJP_RS03575 b487e07949506c002271cab716fe540a 426 SUPERFAMILY SSF53623 13 284 8.01E-85 T 25-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 RJP_RS02990 8b7c372bee84ed97a4b5dcd2dd0523ff 383 PANTHER PTHR21015:SF22 1 380 1.2E-76 T 25-04-2016 RJP_RS02990 8b7c372bee84ed97a4b5dcd2dd0523ff 383 Hamap MF_00033 UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [murG]. 4 376 28.361 T 25-04-2016 IPR006009 N-acetylglucosaminyltransferase, MurG GO:0009252|GO:0050511 KEGG: 00052+2.4.1.22|KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 RJP_RS02990 8b7c372bee84ed97a4b5dcd2dd0523ff 383 Pfam PF03033 Glycosyltransferase family 28 N-terminal domain 4 136 2.0E-34 T 25-04-2016 IPR004276 Glycosyltransferase family 28, N-terminal domain GO:0005975|GO:0016758|GO:0030259 KEGG: 00052+2.4.1.22|KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 RJP_RS02990 8b7c372bee84ed97a4b5dcd2dd0523ff 383 Gene3D G3DSA:3.40.50.2000 3 45 1.7E-6 T 25-04-2016 RJP_RS02990 8b7c372bee84ed97a4b5dcd2dd0523ff 383 SUPERFAMILY SSF53756 2 365 6.45E-86 T 25-04-2016 RJP_RS02990 8b7c372bee84ed97a4b5dcd2dd0523ff 383 Pfam PF04101 Glycosyltransferase family 28 C-terminal domain 201 364 4.7E-44 T 25-04-2016 IPR007235 Glycosyl transferase, family 28, C-terminal GO:0016758 KEGG: 00052+2.4.1.22|KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 RJP_RS02990 8b7c372bee84ed97a4b5dcd2dd0523ff 383 Gene3D G3DSA:3.40.50.2000 150 356 7.3E-55 T 25-04-2016 RJP_RS02990 8b7c372bee84ed97a4b5dcd2dd0523ff 383 TIGRFAM TIGR03777 RPE4: rickettsial palindromic element RPE4 domain 171 197 1.2E-11 T 25-04-2016 IPR022439 Rickettsia palindromic element RPE4 RJP_RS02990 8b7c372bee84ed97a4b5dcd2dd0523ff 383 TIGRFAM TIGR01133 murG: undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase 1 362 4.5E-105 T 25-04-2016 IPR006009 N-acetylglucosaminyltransferase, MurG GO:0009252|GO:0050511 KEGG: 00052+2.4.1.22|KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 RJP_RS02990 8b7c372bee84ed97a4b5dcd2dd0523ff 383 PANTHER PTHR21015 1 380 1.2E-76 T 25-04-2016 RJP_RS02840 6ed19e7ccbfc654d368562cf1f5a17cc 203 Pfam PF14520 Helix-hairpin-helix domain 71 128 7.2E-13 T 25-04-2016 RJP_RS02840 6ed19e7ccbfc654d368562cf1f5a17cc 203 Pfam PF01330 RuvA N terminal domain 1 61 1.6E-17 T 25-04-2016 IPR013849 DNA helicase, Holliday junction RuvA type, domain I, bacterial GO:0005524|GO:0006281|GO:0006310|GO:0009378 RJP_RS02840 6ed19e7ccbfc654d368562cf1f5a17cc 203 SUPERFAMILY SSF47781 64 133 2.71E-18 T 25-04-2016 IPR010994 RuvA domain 2-like Reactome: REACT_216 RJP_RS02840 6ed19e7ccbfc654d368562cf1f5a17cc 203 PANTHER PTHR33796 2 202 1.5E-54 T 25-04-2016 RJP_RS02840 6ed19e7ccbfc654d368562cf1f5a17cc 203 Gene3D G3DSA:1.10.8.10 140 198 4.4E-18 T 25-04-2016 RJP_RS02840 6ed19e7ccbfc654d368562cf1f5a17cc 203 SUPERFAMILY SSF50249 1 62 3.03E-14 T 25-04-2016 IPR012340 Nucleic acid-binding, OB-fold RJP_RS02840 6ed19e7ccbfc654d368562cf1f5a17cc 203 Hamap MF_00031 Holliday junction ATP-dependent DNA helicase RuvA [ruvA]. 1 200 29.255 T 25-04-2016 IPR000085 Bacterial DNA recombination protein RuvA GO:0003678|GO:0006281|GO:0006310 RJP_RS02840 6ed19e7ccbfc654d368562cf1f5a17cc 203 SUPERFAMILY SSF46929 153 198 1.09E-12 T 25-04-2016 IPR011114 DNA helicase, Holliday junction RuvA type, domain III, C-terminal GO:0005524|GO:0006281|GO:0006310|GO:0009378|GO:0009379 RJP_RS02840 6ed19e7ccbfc654d368562cf1f5a17cc 203 Gene3D G3DSA:1.10.150.20 66 139 1.0E-24 T 25-04-2016 RJP_RS02840 6ed19e7ccbfc654d368562cf1f5a17cc 203 TIGRFAM TIGR00084 ruvA: Holliday junction DNA helicase RuvA 1 197 6.7E-43 T 25-04-2016 IPR000085 Bacterial DNA recombination protein RuvA GO:0003678|GO:0006281|GO:0006310 RJP_RS02840 6ed19e7ccbfc654d368562cf1f5a17cc 203 Pfam PF07499 RuvA, C-terminal domain 154 197 4.2E-12 T 25-04-2016 IPR011114 DNA helicase, Holliday junction RuvA type, domain III, C-terminal GO:0005524|GO:0006281|GO:0006310|GO:0009378|GO:0009379 RJP_RS02840 6ed19e7ccbfc654d368562cf1f5a17cc 203 Gene3D G3DSA:2.40.50.140 1 64 2.1E-21 T 25-04-2016 IPR012340 Nucleic acid-binding, OB-fold RJP_RS05145 4f7479349f09fc4c39fefd4411065344 176 Pfam PF03719 Ribosomal protein S5, C-terminal domain 88 158 1.8E-24 T 25-04-2016 IPR005324 Ribosomal protein S5, C-terminal GO:0003735|GO:0005840|GO:0006412 RJP_RS05145 4f7479349f09fc4c39fefd4411065344 176 ProSitePatterns PS00585 Ribosomal protein S5 signature. 28 60 - T 25-04-2016 IPR018192 Ribosomal protein S5, N-terminal, conserved site RJP_RS05145 4f7479349f09fc4c39fefd4411065344 176 Gene3D G3DSA:3.30.160.20 10 73 7.0E-23 T 25-04-2016 IPR014720 Double-stranded RNA-binding domain RJP_RS05145 4f7479349f09fc4c39fefd4411065344 176 TIGRFAM TIGR01021 rpsE_bact: ribosomal protein uS5 9 164 2.8E-65 T 25-04-2016 IPR005712 Ribosomal protein S5, bacterial-type GO:0003735|GO:0006412|GO:0015935 RJP_RS05145 4f7479349f09fc4c39fefd4411065344 176 SUPERFAMILY SSF54768 9 77 1.99E-19 T 25-04-2016 RJP_RS05145 4f7479349f09fc4c39fefd4411065344 176 PANTHER PTHR13718 9 165 2.0E-50 T 25-04-2016 IPR000851 Ribosomal protein S5 GO:0003735|GO:0005840|GO:0006412 RJP_RS05145 4f7479349f09fc4c39fefd4411065344 176 SUPERFAMILY SSF54211 80 159 5.56E-23 T 25-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold RJP_RS05145 4f7479349f09fc4c39fefd4411065344 176 Gene3D G3DSA:3.30.230.10 76 160 2.3E-30 T 25-04-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup RJP_RS05145 4f7479349f09fc4c39fefd4411065344 176 Pfam PF00333 Ribosomal protein S5, N-terminal domain 11 75 3.3E-23 T 25-04-2016 IPR013810 Ribosomal protein S5, N-terminal GO:0003723|GO:0003735|GO:0005840|GO:0006412 RJP_RS05145 4f7479349f09fc4c39fefd4411065344 176 Hamap MF_01307_B 30S ribosomal protein S5 [rpsE]. 1 164 31.697 T 25-04-2016 IPR005712 Ribosomal protein S5, bacterial-type GO:0003735|GO:0006412|GO:0015935 RJP_RS00945 5c0e69ac2908e8cddbac7ee3155ba1ba 160 PIRSF PIRSF002122 2 157 4.9E-52 T 25-04-2016 IPR000235 Ribosomal protein S5/S7 GO:0006412 RJP_RS00945 5c0e69ac2908e8cddbac7ee3155ba1ba 160 PANTHER PTHR11205 1 156 2.3E-69 T 25-04-2016 IPR000235 Ribosomal protein S5/S7 GO:0006412 RJP_RS00945 5c0e69ac2908e8cddbac7ee3155ba1ba 160 Gene3D G3DSA:1.10.455.10 7 154 1.9E-57 T 25-04-2016 IPR023798 Ribosomal protein S7 domain RJP_RS00945 5c0e69ac2908e8cddbac7ee3155ba1ba 160 Pfam PF00177 Ribosomal protein S7p/S5e 1 149 4.1E-61 T 25-04-2016 IPR023798 Ribosomal protein S7 domain RJP_RS00945 5c0e69ac2908e8cddbac7ee3155ba1ba 160 TIGRFAM TIGR01029 rpsG_bact: ribosomal protein uS7 3 155 3.0E-67 T 25-04-2016 IPR005717 Ribosomal protein S7, bacterial/organellar-type GO:0003735|GO:0006412|GO:0015935 RJP_RS00945 5c0e69ac2908e8cddbac7ee3155ba1ba 160 ProSitePatterns PS00052 Ribosomal protein S7 signature. 20 46 - T 25-04-2016 IPR020606 Ribosomal protein S7, conserved site GO:0003723|GO:0003735|GO:0006412 RJP_RS00945 5c0e69ac2908e8cddbac7ee3155ba1ba 160 SUPERFAMILY SSF47973 4 149 6.28E-57 T 25-04-2016 IPR023798 Ribosomal protein S7 domain RJP_RS00945 5c0e69ac2908e8cddbac7ee3155ba1ba 160 Hamap MF_00480_B 30S ribosomal protein S7 [rpsG]. 1 156 32.946 T 25-04-2016 IPR005717 Ribosomal protein S7, bacterial/organellar-type GO:0003735|GO:0006412|GO:0015935 RJP_RS04575 bf07a9d8e76a0279baeba4cecb95cf6f 131 ProDom PD004282 TRANSFERASE SYNTHASE HOLO-ACYL-CARRIER-PROTEIN HOLO-ACP 4'-PHOSPHOPANTETHEINYL FATTY ACID METAL-BINDING MAGNESIUM LIPID 8 88 2.0E-39 T 25-04-2016 IPR004568 Phosphopantetheine-protein transferase domain GO:0000287|GO:0006633|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1 RJP_RS04575 bf07a9d8e76a0279baeba4cecb95cf6f 131 TIGRFAM TIGR00556 pantethn_trn: phosphopantetheine--protein transferase domain 3 124 1.1E-26 T 25-04-2016 IPR004568 Phosphopantetheine-protein transferase domain GO:0000287|GO:0006633|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1 RJP_RS04575 bf07a9d8e76a0279baeba4cecb95cf6f 131 SUPERFAMILY SSF56214 1 123 2.35E-28 T 25-04-2016 IPR008278 4'-phosphopantetheinyl transferase superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1 RJP_RS04575 bf07a9d8e76a0279baeba4cecb95cf6f 131 Pfam PF01648 4'-phosphopantetheinyl transferase superfamily 4 117 1.6E-20 T 25-04-2016 IPR008278 4'-phosphopantetheinyl transferase superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1 RJP_RS04575 bf07a9d8e76a0279baeba4cecb95cf6f 131 Gene3D G3DSA:3.90.470.20 1 124 8.6E-35 T 25-04-2016 IPR008278 4'-phosphopantetheinyl transferase superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1 RJP_RS04575 bf07a9d8e76a0279baeba4cecb95cf6f 131 Hamap MF_00101 Holo-[acyl-carrier-protein] synthase [acpS]. 3 124 25.736 T 25-04-2016 IPR002582 Holo-[acyl carrier protein] synthase GO:0000287|GO:0006633|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1 RJP_RS04575 bf07a9d8e76a0279baeba4cecb95cf6f 131 TIGRFAM TIGR00516 acpS: holo-[acyl-carrier-protein] synthase 1 125 9.8E-33 T 25-04-2016 IPR002582 Holo-[acyl carrier protein] synthase GO:0000287|GO:0006633|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1 RJP_RS06365 cb35851c43f7196975bd1df1854d3f23 125 Pfam PF12784 PD-(D/E)XK nuclease family transposase 9 116 1.9E-24 T 25-04-2016 RJP_RS06365 cb35851c43f7196975bd1df1854d3f23 125 TIGRFAM TIGR01784 T_den_put_tspse: conserved hypothetical protein 9 117 5.8E-18 T 25-04-2016 IPR010106 Conserved hypothetical protein CHP01784 RJP_RS06365 cb35851c43f7196975bd1df1854d3f23 125 PANTHER PTHR41317 1 117 8.4E-15 T 25-04-2016 RJP_RS06365 cb35851c43f7196975bd1df1854d3f23 125 PANTHER PTHR41317:SF1 1 117 8.4E-15 T 25-04-2016 RJP_RS05155 2f5e72e36e3da64216469718c9e1308c 177 Gene3D G3DSA:3.90.930.12 2 82 1.9E-29 T 25-04-2016 IPR020040 Ribosomal protein L6, alpha-beta domain GO:0003735|GO:0005840|GO:0006412|GO:0019843 RJP_RS05155 2f5e72e36e3da64216469718c9e1308c 177 SUPERFAMILY SSF56053 83 176 2.62E-31 T 25-04-2016 IPR020040 Ribosomal protein L6, alpha-beta domain GO:0003735|GO:0005840|GO:0006412|GO:0019843 RJP_RS05155 2f5e72e36e3da64216469718c9e1308c 177 TIGRFAM TIGR03654 L6_bact: ribosomal protein uL6 2 176 4.7E-67 T 25-04-2016 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 RJP_RS05155 2f5e72e36e3da64216469718c9e1308c 177 Gene3D G3DSA:3.90.930.12 83 176 3.5E-34 T 25-04-2016 IPR020040 Ribosomal protein L6, alpha-beta domain GO:0003735|GO:0005840|GO:0006412|GO:0019843 RJP_RS05155 2f5e72e36e3da64216469718c9e1308c 177 Hamap MF_01365_B 50S ribosomal protein L6 [rplF]. 1 176 33.51 T 25-04-2016 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 RJP_RS05155 2f5e72e36e3da64216469718c9e1308c 177 PANTHER PTHR11655 1 176 5.3E-72 T 25-04-2016 IPR000702 Ribosomal protein L6 GO:0003735|GO:0005840|GO:0006412|GO:0019843 RJP_RS05155 2f5e72e36e3da64216469718c9e1308c 177 PIRSF PIRSF002162 1 177 9.4E-50 T 25-04-2016 IPR000702 Ribosomal protein L6 GO:0003735|GO:0005840|GO:0006412|GO:0019843 RJP_RS05155 2f5e72e36e3da64216469718c9e1308c 177 Pfam PF00347 Ribosomal protein L6 11 82 5.7E-18 T 25-04-2016 IPR020040 Ribosomal protein L6, alpha-beta domain GO:0003735|GO:0005840|GO:0006412|GO:0019843 RJP_RS05155 2f5e72e36e3da64216469718c9e1308c 177 Pfam PF00347 Ribosomal protein L6 91 163 6.3E-16 T 25-04-2016 IPR020040 Ribosomal protein L6, alpha-beta domain GO:0003735|GO:0005840|GO:0006412|GO:0019843 RJP_RS05155 2f5e72e36e3da64216469718c9e1308c 177 PANTHER PTHR11655:SF14 1 176 5.3E-72 T 25-04-2016 RJP_RS05155 2f5e72e36e3da64216469718c9e1308c 177 SUPERFAMILY SSF56053 1 82 1.83E-24 T 25-04-2016 IPR020040 Ribosomal protein L6, alpha-beta domain GO:0003735|GO:0005840|GO:0006412|GO:0019843 RJP_RS05155 2f5e72e36e3da64216469718c9e1308c 177 ProSitePatterns PS00525 Ribosomal protein L6 signature 1. 154 162 - T 25-04-2016 IPR002358 Ribosomal protein L6, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 RJP_RS05155 2f5e72e36e3da64216469718c9e1308c 177 PRINTS PR00059 Ribosomal protein L6 signature 141 162 4.6E-25 T 25-04-2016 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 RJP_RS05155 2f5e72e36e3da64216469718c9e1308c 177 PRINTS PR00059 Ribosomal protein L6 signature 99 115 4.6E-25 T 25-04-2016 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 RJP_RS05155 2f5e72e36e3da64216469718c9e1308c 177 PRINTS PR00059 Ribosomal protein L6 signature 71 96 4.6E-25 T 25-04-2016 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 RJP_RS02880 e1609558c2bd6d7dbd5afee4635a775d 180 PANTHER PTHR36917:SF1 1 170 9.5E-34 T 25-04-2016 RJP_RS02880 e1609558c2bd6d7dbd5afee4635a775d 180 Pfam PF04279 Intracellular septation protein A 2 173 4.6E-47 T 25-04-2016 IPR006008 Intracellular septation protein A GO:0016021 RJP_RS02880 e1609558c2bd6d7dbd5afee4635a775d 180 Hamap MF_00189 Probable intracellular septation protein A [yciB]. 2 177 15.918 T 25-04-2016 IPR006008 Intracellular septation protein A GO:0016021 RJP_RS02880 e1609558c2bd6d7dbd5afee4635a775d 180 PANTHER PTHR36917 1 170 9.5E-34 T 25-04-2016 RJP_RS02880 e1609558c2bd6d7dbd5afee4635a775d 180 TIGRFAM TIGR00997 ispZ: intracellular septation protein A 2 178 5.3E-64 T 25-04-2016 IPR006008 Intracellular septation protein A GO:0016021 RJP_RS04890 531f738a7a3bc8b8ca692ac93d446596 203 TIGRFAM TIGR00731 bL25_bact_ctc: ribosomal protein bL25, Ctc-form 7 183 8.3E-64 T 25-04-2016 IPR001021 Ribosomal protein L25, long-form GO:0003735|GO:0005840|GO:0006412|GO:0008097 RJP_RS04890 531f738a7a3bc8b8ca692ac93d446596 203 Hamap MF_01336 50S ribosomal protein L25 [rplY]. 5 97 21.385 T 25-04-2016 IPR020055 Ribosomal protein L25, short-form GO:0003735|GO:0005840|GO:0006412|GO:0008097 RJP_RS04890 531f738a7a3bc8b8ca692ac93d446596 203 Pfam PF01386 Ribosomal L25p family 7 94 1.8E-26 T 25-04-2016 IPR029751 Ribosomal protein L25 GO:0003735|GO:0005840|GO:0006412|GO:0008097 RJP_RS04890 531f738a7a3bc8b8ca692ac93d446596 203 ProDom PD012503 RIBOSOMAL L25 50S RRNA-BINDING RNA-BINDING RIBONUCLEOPROTEIN STRESS GENERAL CTC RRNA 5 94 1.0E-37 T 25-04-2016 IPR029751 Ribosomal protein L25 GO:0003735|GO:0005840|GO:0006412|GO:0008097 RJP_RS04890 531f738a7a3bc8b8ca692ac93d446596 203 SUPERFAMILY SSF50715 4 191 7.67E-53 T 25-04-2016 IPR011035 Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain GO:0006412 Reactome: REACT_71 RJP_RS04890 531f738a7a3bc8b8ca692ac93d446596 203 Hamap MF_01334 50S ribosomal protein L25 [rplY]. 5 184 25.886 T 25-04-2016 IPR001021 Ribosomal protein L25, long-form GO:0003735|GO:0005840|GO:0006412|GO:0008097 RJP_RS04890 531f738a7a3bc8b8ca692ac93d446596 203 Pfam PF14693 Ribosomal protein TL5, C-terminal domain 103 183 3.4E-20 T 25-04-2016 IPR020057 Ribosomal protein L25, beta domain RJP_RS04890 531f738a7a3bc8b8ca692ac93d446596 203 Gene3D G3DSA:2.40.240.10 6 95 3.4E-33 T 25-04-2016 IPR020056 Ribosomal protein L25/Gln-tRNA synthetase, beta-barrel domain Reactome: REACT_71 RJP_RS04890 531f738a7a3bc8b8ca692ac93d446596 203 Gene3D G3DSA:2.170.120.20 100 191 3.7E-22 T 25-04-2016 IPR020057 Ribosomal protein L25, beta domain RJP_RS04890 531f738a7a3bc8b8ca692ac93d446596 203 PANTHER PTHR33284 4 201 2.2E-52 T 25-04-2016 RJP_RS05390 43d741190468da2df9172eb532eac79b 478 Pfam PF03109 ABC1 family 143 252 2.1E-35 T 25-04-2016 IPR004147 UbiB domain RJP_RS05390 43d741190468da2df9172eb532eac79b 478 SUPERFAMILY SSF56112 214 452 4.05E-32 T 25-04-2016 IPR011009 Protein kinase-like domain RJP_RS05390 43d741190468da2df9172eb532eac79b 478 SUPERFAMILY SSF56112 145 180 4.05E-32 T 25-04-2016 IPR011009 Protein kinase-like domain RJP_RS05390 43d741190468da2df9172eb532eac79b 478 TIGRFAM TIGR01982 UbiB: 2-polyprenylphenol 6-hydroxylase 5 462 8.4E-189 T 25-04-2016 IPR010232 Probable protein kinase UbiB GO:0006744 UniPathway: UPA00232 RJP_RS05390 43d741190468da2df9172eb532eac79b 478 PANTHER PTHR10566:SF79 2 115 8.4E-141 T 25-04-2016 RJP_RS05390 43d741190468da2df9172eb532eac79b 478 PANTHER PTHR10566:SF79 138 460 8.4E-141 T 25-04-2016 RJP_RS05390 43d741190468da2df9172eb532eac79b 478 PANTHER PTHR10566 2 115 8.4E-141 T 25-04-2016 RJP_RS05390 43d741190468da2df9172eb532eac79b 478 PANTHER PTHR10566 138 460 8.4E-141 T 25-04-2016 RJP_RS05390 43d741190468da2df9172eb532eac79b 478 Gene3D G3DSA:3.90.1200.10 264 332 9.2E-10 T 25-04-2016 RJP_RS06560 38777f59149ce9b4facd0df36c50b236 159 Pfam PF05433 Glycine zipper 2TM domain 31 72 1.7E-8 T 25-04-2016 IPR008816 Glycine zipper 2TM domain GO:0019867 RJP_RS06560 38777f59149ce9b4facd0df36c50b236 159 PIRSF PIRSF002721 4 159 8.7E-59 T 25-04-2016 IPR016364 Surface antigen, Rickettsia type RJP_RS06560 38777f59149ce9b4facd0df36c50b236 159 Pfam PF16998 17 kDa outer membrane surface antigen 90 158 1.8E-10 T 25-04-2016 IPR032635 Surface antigen domain RJP_RS06775 1a6b74d2ab71ca0a9c980e72b44dcf87 162 PANTHER PTHR30437 5 157 4.2E-63 T 25-04-2016 RJP_RS06775 1a6b74d2ab71ca0a9c980e72b44dcf87 162 Gene3D G3DSA:1.10.287.180 3 76 1.5E-33 T 25-04-2016 IPR022691 Transcription elongation factor, GreA/GreB, N-terminal GO:0003677|GO:0032784 RJP_RS06775 1a6b74d2ab71ca0a9c980e72b44dcf87 162 Pfam PF03449 Transcription elongation factor, N-terminal 6 75 1.1E-31 T 25-04-2016 IPR022691 Transcription elongation factor, GreA/GreB, N-terminal GO:0003677|GO:0032784 RJP_RS06775 1a6b74d2ab71ca0a9c980e72b44dcf87 162 SUPERFAMILY SSF54534 82 157 7.98E-23 T 25-04-2016 RJP_RS06775 1a6b74d2ab71ca0a9c980e72b44dcf87 162 Gene3D G3DSA:3.10.50.30 80 159 8.0E-29 T 25-04-2016 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal GO:0003677|GO:0032784 RJP_RS06775 1a6b74d2ab71ca0a9c980e72b44dcf87 162 ProSitePatterns PS00830 Prokaryotic transcription elongation factors signature 2. 121 137 - T 25-04-2016 IPR018151 Transcription elongation factor, GreA/GreB, conserved site GO:0003677|GO:0032784 RJP_RS06775 1a6b74d2ab71ca0a9c980e72b44dcf87 162 PIRSF PIRSF006092 1 159 1.6E-51 T 25-04-2016 IPR023459 Transcription elongation factor GreA/GreB family GO:0070063 RJP_RS06775 1a6b74d2ab71ca0a9c980e72b44dcf87 162 Pfam PF01272 Transcription elongation factor, GreA/GreB, C-term 83 157 1.7E-27 T 25-04-2016 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal GO:0003677|GO:0032784 RJP_RS06775 1a6b74d2ab71ca0a9c980e72b44dcf87 162 ProSitePatterns PS00829 Prokaryotic transcription elongation factors signature 1. 18 49 - T 25-04-2016 IPR018151 Transcription elongation factor, GreA/GreB, conserved site GO:0003677|GO:0032784 RJP_RS06775 1a6b74d2ab71ca0a9c980e72b44dcf87 162 SUPERFAMILY SSF46557 4 78 3.53E-27 T 25-04-2016 IPR022691 Transcription elongation factor, GreA/GreB, N-terminal GO:0003677|GO:0032784 RJP_RS06775 1a6b74d2ab71ca0a9c980e72b44dcf87 162 Hamap MF_00105 Transcription elongation factor GreA [greA]. 3 156 33.314 T 25-04-2016 IPR028624 Transcription elongation factor GreA/GreB GO:0003677|GO:0032784|GO:0070063 RJP_RS06775 1a6b74d2ab71ca0a9c980e72b44dcf87 162 TIGRFAM TIGR01462 greA: transcription elongation factor GreA 6 156 2.9E-61 T 25-04-2016 IPR006359 Transcription elongation factor GreA GO:0003677|GO:0032784 RJP_RS00870 8306bbc9c2b62637c4eb0871e9c655ea 157 Hamap MF_00034 Crossover junction endodeoxyribonuclease RuvC [ruvC]. 1 154 40.796 T 25-04-2016 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 RJP_RS00870 8306bbc9c2b62637c4eb0871e9c655ea 157 Gene3D G3DSA:3.30.420.10 1 155 3.4E-49 T 25-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 RJP_RS00870 8306bbc9c2b62637c4eb0871e9c655ea 157 Pfam PF02075 Crossover junction endodeoxyribonuclease RuvC 3 150 6.4E-39 T 25-04-2016 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 RJP_RS00870 8306bbc9c2b62637c4eb0871e9c655ea 157 PANTHER PTHR30194 1 150 2.2E-57 T 25-04-2016 RJP_RS00870 8306bbc9c2b62637c4eb0871e9c655ea 157 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 139 151 4.1E-21 T 25-04-2016 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 RJP_RS00870 8306bbc9c2b62637c4eb0871e9c655ea 157 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 4 17 4.1E-21 T 25-04-2016 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 RJP_RS00870 8306bbc9c2b62637c4eb0871e9c655ea 157 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 61 77 4.1E-21 T 25-04-2016 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 RJP_RS00870 8306bbc9c2b62637c4eb0871e9c655ea 157 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 107 126 4.1E-21 T 25-04-2016 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 RJP_RS00870 8306bbc9c2b62637c4eb0871e9c655ea 157 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 83 99 4.1E-21 T 25-04-2016 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 RJP_RS00870 8306bbc9c2b62637c4eb0871e9c655ea 157 ProSitePatterns PS01321 Crossover junction endodeoxyribonuclease ruvC signature. 113 148 - T 25-04-2016 IPR020563 Crossover junction endodeoxyribonuclease RuvC, magnesium-binding site GO:0008821 RJP_RS00870 8306bbc9c2b62637c4eb0871e9c655ea 157 SUPERFAMILY SSF53098 1 154 4.8E-42 T 25-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 RJP_RS00870 8306bbc9c2b62637c4eb0871e9c655ea 157 TIGRFAM TIGR00228 ruvC: crossover junction endodeoxyribonuclease RuvC 3 150 9.1E-35 T 25-04-2016 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 RJP_RS03860 a3b178b1773f7124a4ff3a3ac6e4258b 281 SUPERFAMILY SSF53098 2 204 4.11E-59 T 25-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 RJP_RS03860 a3b178b1773f7124a4ff3a3ac6e4258b 281 PANTHER PTHR12124:SF42 1 274 1.7E-42 T 25-04-2016 RJP_RS03860 a3b178b1773f7124a4ff3a3ac6e4258b 281 Pfam PF01612 3'-5' exonuclease 1 168 3.3E-49 T 25-04-2016 IPR002562 3'-5' exonuclease domain GO:0003676|GO:0006139|GO:0008408 RJP_RS03860 a3b178b1773f7124a4ff3a3ac6e4258b 281 SUPERFAMILY SSF47819 193 280 3.71E-10 T 25-04-2016 IPR010997 HRDC-like GO:0000166|GO:0003824|GO:0044237 RJP_RS03860 a3b178b1773f7124a4ff3a3ac6e4258b 281 PANTHER PTHR12124 1 274 1.7E-42 T 25-04-2016 RJP_RS03860 a3b178b1773f7124a4ff3a3ac6e4258b 281 Gene3D G3DSA:3.30.420.10 2 185 9.3E-18 T 25-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 RJP_RS03860 a3b178b1773f7124a4ff3a3ac6e4258b 281 SMART SM00474 1 169 9.3E-51 T 25-04-2016 IPR002562 3'-5' exonuclease domain GO:0003676|GO:0006139|GO:0008408 RJP_RS00170 69f974e60441746be4f22d788e38adb4 164 Hamap MF_01398 ATP synthase subunit b [atpF]. 4 156 8.579 T 25-04-2016 IPR002146 ATPase, F0 complex, subunit B/B', bacterial/chloroplast GO:0015078|GO:0015986|GO:0045263 RJP_RS00170 69f974e60441746be4f22d788e38adb4 164 Pfam PF00430 ATP synthase B/B' CF(0) 8 129 4.3E-10 T 25-04-2016 IPR002146 ATPase, F0 complex, subunit B/B', bacterial/chloroplast GO:0015078|GO:0015986|GO:0045263 RJP_RS04260 e599043bb960bfad868ca673aa381064 251 PANTHER PTHR32319 1 248 1.3E-96 T 25-04-2016 RJP_RS04260 e599043bb960bfad868ca673aa381064 251 SUPERFAMILY SSF53335 57 247 4.15E-21 T 25-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RJP_RS04260 e599043bb960bfad868ca673aa381064 251 PIRSF PIRSF005578 1 249 2.5E-86 T 25-04-2016 IPR004538 Haemolysin A /rRNA methyltransferase TlyA GO:0003723 RJP_RS04260 e599043bb960bfad868ca673aa381064 251 SMART SM00363 4 70 6.4E-5 T 25-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 RJP_RS04260 e599043bb960bfad868ca673aa381064 251 SUPERFAMILY SSF55174 2 58 9.57E-6 T 25-04-2016 RJP_RS04260 e599043bb960bfad868ca673aa381064 251 Pfam PF01728 FtsJ-like methyltransferase 61 244 1.6E-24 T 25-04-2016 IPR002877 Ribosomal RNA methyltransferase FtsJ domain GO:0008168|GO:0032259 RJP_RS04260 e599043bb960bfad868ca673aa381064 251 PANTHER PTHR32319:SF0 1 248 1.3E-96 T 25-04-2016 RJP_RS04260 e599043bb960bfad868ca673aa381064 251 TIGRFAM TIGR00478 tly: TlyA family rRNA methyltransferase/putative hemolysin 5 238 2.1E-59 T 25-04-2016 IPR004538 Haemolysin A /rRNA methyltransferase TlyA GO:0003723 RJP_RS04260 e599043bb960bfad868ca673aa381064 251 Gene3D G3DSA:3.40.50.150 91 180 4.2E-5 T 25-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RJP_RS04260 e599043bb960bfad868ca673aa381064 251 Gene3D G3DSA:3.10.290.10 5 90 2.2E-14 T 25-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 RJP_RS03565 89a81a94d9b8845801559eb80de1e6ce 250 SUPERFAMILY SSF52317 27 207 5.39E-13 T 25-04-2016 IPR029062 Class I glutamine amidotransferase-like RJP_RS03565 89a81a94d9b8845801559eb80de1e6ce 250 Gene3D G3DSA:3.40.50.880 30 206 1.6E-4 T 25-04-2016 IPR029062 Class I glutamine amidotransferase-like RJP_RS03565 89a81a94d9b8845801559eb80de1e6ce 250 Pfam PF09825 Biotin-protein ligase, N terminal 1 239 3.5E-74 T 25-04-2016 IPR019197 Biotin-protein ligase, N-terminal RJP_RS03565 89a81a94d9b8845801559eb80de1e6ce 250 PANTHER PTHR12835:SF7 2 208 1.2E-53 T 25-04-2016 IPR015834 Uncharacterised conserved protein UCP016642 RJP_RS03565 89a81a94d9b8845801559eb80de1e6ce 250 PANTHER PTHR12835 2 208 1.2E-53 T 25-04-2016 IPR004408 Biotin--acetyl-CoA-carboxylase ligase GO:0004077|GO:0006464 RJP_RS03565 89a81a94d9b8845801559eb80de1e6ce 250 PIRSF PIRSF016642 1 250 2.1E-97 T 25-04-2016 IPR015834 Uncharacterised conserved protein UCP016642 RJP_RS03560 e6b8d265f143268a55578dbec9e2d98a 222 Gene3D G3DSA:1.20.1050.10 97 218 2.4E-29 T 25-04-2016 IPR010987 Glutathione S-transferase, C-terminal-like RJP_RS03560 e6b8d265f143268a55578dbec9e2d98a 222 Pfam PF13417 Glutathione S-transferase, N-terminal domain 4 76 2.9E-9 T 25-04-2016 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 RJP_RS03560 e6b8d265f143268a55578dbec9e2d98a 222 SUPERFAMILY SSF47616 70 216 1.39E-22 T 25-04-2016 IPR010987 Glutathione S-transferase, C-terminal-like RJP_RS03560 e6b8d265f143268a55578dbec9e2d98a 222 PANTHER PTHR11260 1 206 2.3E-129 T 25-04-2016 RJP_RS03560 e6b8d265f143268a55578dbec9e2d98a 222 SUPERFAMILY SSF52833 2 103 3.69E-15 T 25-04-2016 IPR012336 Thioredoxin-like fold RJP_RS03560 e6b8d265f143268a55578dbec9e2d98a 222 PANTHER PTHR11260:SF286 1 206 2.3E-129 T 25-04-2016 RJP_RS03560 e6b8d265f143268a55578dbec9e2d98a 222 Gene3D G3DSA:3.40.30.10 3 96 5.2E-17 T 25-04-2016 IPR012336 Thioredoxin-like fold RJP_RS03560 e6b8d265f143268a55578dbec9e2d98a 222 Pfam PF00043 Glutathione S-transferase, C-terminal domain 128 198 5.4E-7 T 25-04-2016 IPR004046 Glutathione S-transferase, C-terminal RJP_RS00690 157084497e4960f1c462906456ef4504 334 SUPERFAMILY SSF53335 114 317 1.69E-20 T 25-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RJP_RS00690 157084497e4960f1c462906456ef4504 334 SUPERFAMILY SSF48452 44 110 2.96E-9 T 25-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 RJP_RS00690 157084497e4960f1c462906456ef4504 334 Gene3D G3DSA:3.40.50.150 104 316 1.1E-14 T 25-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RJP_RS00690 157084497e4960f1c462906456ef4504 334 Gene3D G3DSA:1.25.40.10 47 103 8.5E-8 T 25-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 RJP_RS00690 157084497e4960f1c462906456ef4504 334 Pfam PF13489 Methyltransferase domain 159 312 4.6E-8 T 25-04-2016 RJP_RS01340 2391692f6630d2b557d55f83f451792f 796 TIGRFAM TIGR02073 PBP_1c: penicillin-binding protein 1C 26 794 1.4E-205 T 25-04-2016 IPR011815 Penicillin-binding protein 1C GO:0008955|GO:0009252 KEGG: 00230+2.4.2.-|KEGG: 00514+2.4.2.-|UniPathway: UPA00219 RJP_RS01340 2391692f6630d2b557d55f83f451792f 796 Pfam PF00912 Transglycosylase 52 198 3.7E-43 T 25-04-2016 IPR001264 Glycosyl transferase, family 51 UniPathway: UPA00219 RJP_RS01340 2391692f6630d2b557d55f83f451792f 796 Gene3D G3DSA:1.10.3810.10 51 198 2.1E-41 T 25-04-2016 RJP_RS01340 2391692f6630d2b557d55f83f451792f 796 SUPERFAMILY SSF56601 506 668 9.55E-78 T 25-04-2016 IPR012338 Beta-lactamase/transpeptidase-like RJP_RS01340 2391692f6630d2b557d55f83f451792f 796 SUPERFAMILY SSF56601 256 472 9.55E-78 T 25-04-2016 IPR012338 Beta-lactamase/transpeptidase-like RJP_RS01340 2391692f6630d2b557d55f83f451792f 796 PANTHER PTHR32282 7 476 5.5E-130 T 25-04-2016 RJP_RS01340 2391692f6630d2b557d55f83f451792f 796 PANTHER PTHR32282 506 711 5.5E-130 T 25-04-2016 RJP_RS01340 2391692f6630d2b557d55f83f451792f 796 Pfam PF00905 Penicillin binding protein transpeptidase domain 295 459 2.4E-10 T 25-04-2016 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 RJP_RS01340 2391692f6630d2b557d55f83f451792f 796 Gene3D G3DSA:3.40.710.10 507 656 8.2E-70 T 25-04-2016 IPR012338 Beta-lactamase/transpeptidase-like RJP_RS01340 2391692f6630d2b557d55f83f451792f 796 Gene3D G3DSA:3.40.710.10 260 475 8.2E-70 T 25-04-2016 IPR012338 Beta-lactamase/transpeptidase-like RJP_RS01340 2391692f6630d2b557d55f83f451792f 796 SUPERFAMILY SSF53955 31 199 1.66E-50 T 25-04-2016 IPR023346 Lysozyme-like domain RJP_RS01340 2391692f6630d2b557d55f83f451792f 796 Pfam PF06832 Penicillin-Binding Protein C-terminus Family 714 792 4.6E-7 T 25-04-2016 IPR009647 Penicillin-binding, C-terminal KEGG: 00230+2.4.2.-|KEGG: 00514+2.4.2.-|UniPathway: UPA00219 RJP_RS01340 2391692f6630d2b557d55f83f451792f 796 PANTHER PTHR32282:SF0 7 476 5.5E-130 T 25-04-2016 RJP_RS01340 2391692f6630d2b557d55f83f451792f 796 PANTHER PTHR32282:SF0 506 711 5.5E-130 T 25-04-2016 RJP_RS06180 219a51ae682c95469baa5cbb72ccb202 1181 Gene3D G3DSA:3.20.20.140 10 249 5.2E-13 T 25-04-2016 RJP_RS06180 219a51ae682c95469baa5cbb72ccb202 1181 Pfam PF14579 Helix-hairpin-helix motif 807 931 1.6E-17 T 25-04-2016 IPR029460 DNA polymerase, helix-hairpin-helix motif KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 RJP_RS06180 219a51ae682c95469baa5cbb72ccb202 1181 PANTHER PTHR32294:SF0 1 826 0.0 T 25-04-2016 RJP_RS06180 219a51ae682c95469baa5cbb72ccb202 1181 PANTHER PTHR32294:SF0 862 1169 0.0 T 25-04-2016 RJP_RS06180 219a51ae682c95469baa5cbb72ccb202 1181 PANTHER PTHR32294 1 826 0.0 T 25-04-2016 RJP_RS06180 219a51ae682c95469baa5cbb72ccb202 1181 PANTHER PTHR32294 862 1169 0.0 T 25-04-2016 RJP_RS06180 219a51ae682c95469baa5cbb72ccb202 1181 Gene3D G3DSA:1.10.150.280 857 923 1.1E-4 T 25-04-2016 RJP_RS06180 219a51ae682c95469baa5cbb72ccb202 1181 Pfam PF02811 PHP domain 7 170 6.3E-26 T 25-04-2016 IPR004013 PHP domain GO:0003824 RJP_RS06180 219a51ae682c95469baa5cbb72ccb202 1181 TIGRFAM TIGR00594 polc: DNA polymerase III, alpha subunit 5 1061 0.0 T 25-04-2016 IPR004805 DNA polymerase III, alpha subunit GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 RJP_RS06180 219a51ae682c95469baa5cbb72ccb202 1181 Gene3D G3DSA:2.40.50.140 1024 1104 9.7E-4 T 25-04-2016 IPR012340 Nucleic acid-binding, OB-fold RJP_RS06180 219a51ae682c95469baa5cbb72ccb202 1181 SUPERFAMILY SSF89550 11 257 5.3E-11 T 25-04-2016 IPR016195 Polymerase/histidinol phosphatase-like GO:0003824 RJP_RS06180 219a51ae682c95469baa5cbb72ccb202 1181 SMART SM00481 6 73 4.4E-19 T 25-04-2016 IPR003141 Polymerase/histidinol phosphatase, N-terminal GO:0003677|GO:0003887|GO:0006260 RJP_RS06180 219a51ae682c95469baa5cbb72ccb202 1181 Pfam PF07733 Bacterial DNA polymerase III alpha subunit 292 734 2.0E-162 T 25-04-2016 IPR011708 Bacterial DNA polymerase III, alpha subunit GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 RJP_RS00920 d5314723fbd216e979e718ef2df3be04 124 Gene3D G3DSA:1.20.1300.10 9 124 5.4E-38 T 25-04-2016 RJP_RS00920 d5314723fbd216e979e718ef2df3be04 124 TIGRFAM TIGR02970 succ_dehyd_cytB: succinate dehydrogenase, cytochrome b556 subunit 10 124 1.4E-34 T 25-04-2016 IPR014314 Succinate dehydrogenase, cytochrome b556 subunit GO:0000104|GO:0006099|GO:0045281 UniPathway: UPA00223 RJP_RS00920 d5314723fbd216e979e718ef2df3be04 124 PIRSF PIRSF000178 1 124 2.2E-42 T 25-04-2016 RJP_RS00920 d5314723fbd216e979e718ef2df3be04 124 SUPERFAMILY SSF81343 6 124 6.1E-31 T 25-04-2016 RJP_RS00920 d5314723fbd216e979e718ef2df3be04 124 Pfam PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit 10 122 5.6E-26 T 25-04-2016 IPR000701 Succinate dehydrogenase/Fumarate reductase, transmembrane subunit GO:0016627 UniPathway: UPA00223 RJP_RS00920 d5314723fbd216e979e718ef2df3be04 124 PANTHER PTHR10978 11 124 2.4E-38 T 25-04-2016 RJP_RS00920 d5314723fbd216e979e718ef2df3be04 124 ProSitePatterns PS01001 Succinate dehydrogenase cytochrome b subunit signature 2. 83 96 - T 25-04-2016 IPR018495 Succinate dehydrogenase, cytochrome b subunit, conserved site GO:0000104|GO:0006099|GO:0009055|GO:0016020 UniPathway: UPA00223 RJP_RS00925 f01ff32719bf5254c063f5a07d72e13f 125 SUPERFAMILY SSF81343 14 122 1.57E-27 T 25-04-2016 RJP_RS00925 f01ff32719bf5254c063f5a07d72e13f 125 Pfam PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit 13 114 2.6E-14 T 25-04-2016 IPR000701 Succinate dehydrogenase/Fumarate reductase, transmembrane subunit GO:0016627 UniPathway: UPA00223 RJP_RS00925 f01ff32719bf5254c063f5a07d72e13f 125 TIGRFAM TIGR02968 succ_dehyd_anc: succinate dehydrogenase, hydrophobic membrane anchor protein 18 122 3.3E-28 T 25-04-2016 IPR014312 Succinate dehydrogenase, hydrophobic membrane anchor GO:0000104|GO:0006099|GO:0016021|GO:0020037 UniPathway: UPA00223 RJP_RS00925 f01ff32719bf5254c063f5a07d72e13f 125 Gene3D G3DSA:1.20.1300.10 11 122 1.3E-29 T 25-04-2016 RJP_RS05745 fcd7732d90ee0b689f3aefa5279ea4c2 229 TIGRFAM TIGR01406 dnaQ_proteo: DNA polymerase III, epsilon subunit 5 227 1.4E-101 T 25-04-2016 IPR006309 DNA polymerase 3, epsilon subunit GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 RJP_RS05745 fcd7732d90ee0b689f3aefa5279ea4c2 229 TIGRFAM TIGR00573 dnaq: exonuclease, DNA polymerase III, epsilon subunit family 6 218 3.6E-61 T 25-04-2016 IPR006054 DNA polymerase III, epsilon subunit GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 RJP_RS05745 fcd7732d90ee0b689f3aefa5279ea4c2 229 Pfam PF00929 Exonuclease 7 169 6.5E-42 T 25-04-2016 IPR013520 Exonuclease, RNase T/DNA polymerase III RJP_RS05745 fcd7732d90ee0b689f3aefa5279ea4c2 229 SMART SM00479 5 178 9.3E-52 T 25-04-2016 IPR013520 Exonuclease, RNase T/DNA polymerase III RJP_RS05745 fcd7732d90ee0b689f3aefa5279ea4c2 229 Gene3D G3DSA:3.30.420.10 3 178 5.8E-64 T 25-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 RJP_RS05745 fcd7732d90ee0b689f3aefa5279ea4c2 229 PANTHER PTHR30231 1 227 3.3E-85 T 25-04-2016 RJP_RS05745 fcd7732d90ee0b689f3aefa5279ea4c2 229 PANTHER PTHR30231:SF0 1 227 3.3E-85 T 25-04-2016 RJP_RS05745 fcd7732d90ee0b689f3aefa5279ea4c2 229 SUPERFAMILY SSF53098 3 176 2.14E-52 T 25-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 RJP_RS06595 b358cb3c5ca0ab6c2fda3b9f7eb182f0 953 TIGRFAM TIGR00630 uvra: excinuclease ABC subunit A 6 937 0.0 T 25-04-2016 IPR004602 UvrABC system subunit A GO:0006289|GO:0009380|GO:0009381 RJP_RS06595 b358cb3c5ca0ab6c2fda3b9f7eb182f0 953 SUPERFAMILY SSF52540 443 581 2.09E-46 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RJP_RS06595 b358cb3c5ca0ab6c2fda3b9f7eb182f0 953 SUPERFAMILY SSF52540 11 206 2.09E-46 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RJP_RS06595 b358cb3c5ca0ab6c2fda3b9f7eb182f0 953 Gene3D G3DSA:1.20.1580.10 261 294 6.4E-50 T 25-04-2016 RJP_RS06595 b358cb3c5ca0ab6c2fda3b9f7eb182f0 953 Gene3D G3DSA:1.20.1580.10 93 131 6.4E-50 T 25-04-2016 RJP_RS06595 b358cb3c5ca0ab6c2fda3b9f7eb182f0 953 Gene3D G3DSA:1.20.1580.10 417 489 6.4E-50 T 25-04-2016 RJP_RS06595 b358cb3c5ca0ab6c2fda3b9f7eb182f0 953 Gene3D G3DSA:3.40.50.300 619 684 9.2E-59 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RJP_RS06595 b358cb3c5ca0ab6c2fda3b9f7eb182f0 953 Gene3D G3DSA:3.40.50.300 833 951 9.2E-59 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RJP_RS06595 b358cb3c5ca0ab6c2fda3b9f7eb182f0 953 Gene3D G3DSA:3.40.50.300 7 53 3.1E-56 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RJP_RS06595 b358cb3c5ca0ab6c2fda3b9f7eb182f0 953 Gene3D G3DSA:3.40.50.300 490 608 3.1E-56 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RJP_RS06595 b358cb3c5ca0ab6c2fda3b9f7eb182f0 953 PANTHER PTHR32282:SF2 2 952 0.0 T 25-04-2016 RJP_RS06595 b358cb3c5ca0ab6c2fda3b9f7eb182f0 953 Gene3D G3DSA:3.30.1490.20 202 241 4.8E-20 T 25-04-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 RJP_RS06595 b358cb3c5ca0ab6c2fda3b9f7eb182f0 953 Gene3D G3DSA:3.30.1490.20 132 155 4.8E-20 T 25-04-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 RJP_RS06595 b358cb3c5ca0ab6c2fda3b9f7eb182f0 953 Pfam PF00005 ABC transporter 818 872 7.0E-5 T 25-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 RJP_RS06595 b358cb3c5ca0ab6c2fda3b9f7eb182f0 953 PANTHER PTHR32282 2 952 0.0 T 25-04-2016 RJP_RS06595 b358cb3c5ca0ab6c2fda3b9f7eb182f0 953 Hamap MF_00205 UvrABC system protein A [uvrA]. 3 952 22.676 T 25-04-2016 IPR004602 UvrABC system subunit A GO:0006289|GO:0009380|GO:0009381 RJP_RS06595 b358cb3c5ca0ab6c2fda3b9f7eb182f0 953 ProSitePatterns PS00211 ABC transporters family signature. 499 513 - T 25-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 RJP_RS06595 b358cb3c5ca0ab6c2fda3b9f7eb182f0 953 ProSitePatterns PS00211 ABC transporters family signature. 842 856 - T 25-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 RJP_RS06595 b358cb3c5ca0ab6c2fda3b9f7eb182f0 953 Gene3D G3DSA:1.10.8.280 298 416 1.7E-29 T 25-04-2016 RJP_RS06595 b358cb3c5ca0ab6c2fda3b9f7eb182f0 953 SUPERFAMILY SSF52540 634 922 4.18E-50 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RJP_RS06595 b358cb3c5ca0ab6c2fda3b9f7eb182f0 953 Gene3D G3DSA:1.20.1580.10 706 832 2.7E-51 T 25-04-2016 RJP_RS06270 17f72ebfe7b37265259e330553a6d04c 159 PANTHER PTHR10849:SF16 8 159 5.4E-102 T 25-04-2016 RJP_RS06270 17f72ebfe7b37265259e330553a6d04c 159 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 99 110 - T 25-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site RJP_RS06270 17f72ebfe7b37265259e330553a6d04c 159 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 60 71 - T 25-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site RJP_RS06270 17f72ebfe7b37265259e330553a6d04c 159 SUPERFAMILY SSF54862 33 142 3.22E-28 T 25-04-2016 RJP_RS06270 17f72ebfe7b37265259e330553a6d04c 159 PANTHER PTHR10849 8 159 5.4E-102 T 25-04-2016 RJP_RS06270 17f72ebfe7b37265259e330553a6d04c 159 Hamap MF_01351 NAD(P)H-quinone oxidoreductase subunit I, chloroplastic [ndhI]. 7 143 29.125 T 25-04-2016 IPR010226 NADH-quinone oxidoreductase, chain I GO:0016020|GO:0016651|GO:0051539|GO:0055114 RJP_RS06270 17f72ebfe7b37265259e330553a6d04c 159 Gene3D G3DSA:1.10.1060.10 12 124 2.9E-23 T 25-04-2016 RJP_RS06270 17f72ebfe7b37265259e330553a6d04c 159 Pfam PF12838 4Fe-4S dicluster domain 59 113 2.3E-13 T 25-04-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain RJP_RS06270 17f72ebfe7b37265259e330553a6d04c 159 TIGRFAM TIGR01971 NuoI: NADH-quinone oxidoreductase, chain I 16 137 1.3E-50 T 25-04-2016 IPR010226 NADH-quinone oxidoreductase, chain I GO:0016020|GO:0016651|GO:0051539|GO:0055114 RJP_RS05565 4320af825184316048e604fef4aba9af 576 ProSitePatterns PS00211 ABC transporters family signature. 475 489 - T 25-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 RJP_RS05565 4320af825184316048e604fef4aba9af 576 SMART SM00382 363 549 1.9E-14 T 25-04-2016 IPR003593 AAA+ ATPase domain RJP_RS05565 4320af825184316048e604fef4aba9af 576 Pfam PF00664 ABC transporter transmembrane region 20 285 1.8E-43 T 25-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 RJP_RS05565 4320af825184316048e604fef4aba9af 576 PANTHER PTHR24221 6 574 1.9E-183 T 25-04-2016 RJP_RS05565 4320af825184316048e604fef4aba9af 576 SUPERFAMILY SSF52540 333 573 3.26E-79 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RJP_RS05565 4320af825184316048e604fef4aba9af 576 Gene3D G3DSA:1.20.1560.10 8 319 2.4E-62 T 25-04-2016 RJP_RS05565 4320af825184316048e604fef4aba9af 576 Gene3D G3DSA:3.40.50.300 336 567 3.6E-74 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RJP_RS05565 4320af825184316048e604fef4aba9af 576 SUPERFAMILY SSF90123 8 319 1.44E-60 T 25-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 RJP_RS05565 4320af825184316048e604fef4aba9af 576 Pfam PF00005 ABC transporter 355 502 1.3E-33 T 25-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 RJP_RS04215 13be3e5fe6117fa7a3f7a5c4b81b7c55 237 TIGRFAM TIGR00613 reco: DNA repair protein RecO 3 232 1.9E-63 T 25-04-2016 IPR003717 Recombination protein O, RecO GO:0006281|GO:0006310 RJP_RS04215 13be3e5fe6117fa7a3f7a5c4b81b7c55 237 Hamap MF_00201 DNA repair protein RecO [recO]. 1 233 15.249 T 25-04-2016 IPR003717 Recombination protein O, RecO GO:0006281|GO:0006310 RJP_RS04215 13be3e5fe6117fa7a3f7a5c4b81b7c55 237 Pfam PF02565 Recombination protein O C terminal 86 219 2.5E-18 T 25-04-2016 IPR003717 Recombination protein O, RecO GO:0006281|GO:0006310 RJP_RS04215 13be3e5fe6117fa7a3f7a5c4b81b7c55 237 Gene3D G3DSA:2.40.50.140 3 45 5.9E-5 T 25-04-2016 IPR012340 Nucleic acid-binding, OB-fold RJP_RS04215 13be3e5fe6117fa7a3f7a5c4b81b7c55 237 SUPERFAMILY SSF57863 86 174 7.32E-7 T 25-04-2016 RJP_RS04215 13be3e5fe6117fa7a3f7a5c4b81b7c55 237 PANTHER PTHR33991 1 237 5.6E-15 T 25-04-2016 RJP_RS04215 13be3e5fe6117fa7a3f7a5c4b81b7c55 237 ProDom PD202328 DNA REPAIR RECOMBINATION RECO DAMAGE O O RECO-RELATED RECOMBINATIONAL RP549 117 235 2.0E-64 T 25-04-2016 RJP_RS04215 13be3e5fe6117fa7a3f7a5c4b81b7c55 237 Pfam PF11967 Recombination protein O N terminal 1 76 1.6E-10 T 25-04-2016 IPR022572 DNA replication/recombination mediator RecO, N-terminal RJP_RS05540 3d0679f431f2e71a3936ece1a92ac5f9 425 PANTHER PTHR11262:SF4 4 405 4.3E-230 T 25-04-2016 RJP_RS05540 3d0679f431f2e71a3936ece1a92ac5f9 425 SUPERFAMILY SSF57716 10 45 1.85E-10 T 25-04-2016 RJP_RS05540 3d0679f431f2e71a3936ece1a92ac5f9 425 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 312 382 2.1E-13 T 25-04-2016 IPR019489 Clp ATPase, C-terminal RJP_RS05540 3d0679f431f2e71a3936ece1a92ac5f9 425 PANTHER PTHR11262 4 405 4.3E-230 T 25-04-2016 RJP_RS05540 3d0679f431f2e71a3936ece1a92ac5f9 425 Hamap MF_00175 ATP-dependent Clp protease ATP-binding subunit ClpX [clpX]. 3 409 51.332 T 25-04-2016 IPR004487 Clp protease, ATP-binding subunit ClpX GO:0005524|GO:0006457|GO:0051082 RJP_RS05540 3d0679f431f2e71a3936ece1a92ac5f9 425 Pfam PF06689 ClpX C4-type zinc finger 11 47 3.2E-17 T 25-04-2016 IPR010603 Zinc finger, ClpX C4-type GO:0008270|GO:0046983 RJP_RS05540 3d0679f431f2e71a3936ece1a92ac5f9 425 SMART SM00382 108 265 1.2E-7 T 25-04-2016 IPR003593 AAA+ ATPase domain RJP_RS05540 3d0679f431f2e71a3936ece1a92ac5f9 425 SMART SM00994 9 48 1.5E-20 T 25-04-2016 IPR010603 Zinc finger, ClpX C4-type GO:0008270|GO:0046983 RJP_RS05540 3d0679f431f2e71a3936ece1a92ac5f9 425 Gene3D G3DSA:1.10.8.60 311 406 8.1E-32 T 25-04-2016 RJP_RS05540 3d0679f431f2e71a3936ece1a92ac5f9 425 TIGRFAM TIGR00382 clpX: ATP-dependent Clp protease, ATP-binding subunit ClpX 4 401 6.8E-192 T 25-04-2016 IPR004487 Clp protease, ATP-binding subunit ClpX GO:0005524|GO:0006457|GO:0051082 RJP_RS05540 3d0679f431f2e71a3936ece1a92ac5f9 425 Pfam PF07724 AAA domain (Cdc48 subfamily) 109 306 1.9E-49 T 25-04-2016 IPR003959 ATPase, AAA-type, core GO:0005524 RJP_RS05540 3d0679f431f2e71a3936ece1a92ac5f9 425 Gene3D G3DSA:3.40.50.300 61 250 5.6E-50 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RJP_RS05540 3d0679f431f2e71a3936ece1a92ac5f9 425 Gene3D G3DSA:3.40.50.300 289 306 5.6E-50 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RJP_RS05540 3d0679f431f2e71a3936ece1a92ac5f9 425 SMART SM01086 312 405 1.1E-24 T 25-04-2016 IPR019489 Clp ATPase, C-terminal RJP_RS05540 3d0679f431f2e71a3936ece1a92ac5f9 425 SUPERFAMILY SSF52540 58 399 1.42E-73 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RJP_RS00585 3c2cc05d6b6028f4da4ff22bd6b7df08 152 SUPERFAMILY SSF54611 14 147 1.68E-43 T 25-04-2016 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 RJP_RS00585 3c2cc05d6b6028f4da4ff22bd6b7df08 152 PANTHER PTHR36918 1 143 1.5E-36 T 25-04-2016 RJP_RS00585 3c2cc05d6b6028f4da4ff22bd6b7df08 152 Pfam PF02556 Preprotein translocase subunit SecB 10 149 3.6E-48 T 25-04-2016 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 RJP_RS00585 3c2cc05d6b6028f4da4ff22bd6b7df08 152 PANTHER PTHR36918:SF1 1 143 1.5E-36 T 25-04-2016 RJP_RS00585 3c2cc05d6b6028f4da4ff22bd6b7df08 152 TIGRFAM TIGR00809 secB: protein-export chaperone SecB 9 149 6.5E-65 T 25-04-2016 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 RJP_RS00585 3c2cc05d6b6028f4da4ff22bd6b7df08 152 PRINTS PR01594 Bacterial protein-transport SecB chaperone protein signature 129 147 2.2E-28 T 25-04-2016 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 RJP_RS00585 3c2cc05d6b6028f4da4ff22bd6b7df08 152 PRINTS PR01594 Bacterial protein-transport SecB chaperone protein signature 79 99 2.2E-28 T 25-04-2016 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 RJP_RS00585 3c2cc05d6b6028f4da4ff22bd6b7df08 152 PRINTS PR01594 Bacterial protein-transport SecB chaperone protein signature 17 34 2.2E-28 T 25-04-2016 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 RJP_RS00585 3c2cc05d6b6028f4da4ff22bd6b7df08 152 PRINTS PR01594 Bacterial protein-transport SecB chaperone protein signature 103 125 2.2E-28 T 25-04-2016 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 RJP_RS00585 3c2cc05d6b6028f4da4ff22bd6b7df08 152 Hamap MF_00821 Protein-export protein SecB [secB]. 1 151 29.147 T 25-04-2016 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 RJP_RS00585 3c2cc05d6b6028f4da4ff22bd6b7df08 152 Gene3D G3DSA:3.10.420.10 7 151 1.6E-51 T 25-04-2016 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 RJP_RS06790 942a27d477c899f90407403fc7d91253 212 Gene3D G3DSA:2.50.20.10 27 192 7.0E-21 T 25-04-2016 RJP_RS06790 942a27d477c899f90407403fc7d91253 212 SUPERFAMILY SSF89392 27 192 5.1E-25 T 25-04-2016 IPR029046 Lipoprotein localisation LolA/LolB/LppX RJP_RS06790 942a27d477c899f90407403fc7d91253 212 Pfam PF03548 Outer membrane lipoprotein carrier protein LolA 37 188 4.4E-31 T 25-04-2016 IPR004564 Outer membrane lipoprotein carrier protein LolA-like RJP_RS05400 df4a761ce141601c3c3df2a5ad2eeb4b 273 Gene3D G3DSA:1.10.8.50 133 271 1.9E-48 T 25-04-2016 RJP_RS05400 df4a761ce141601c3c3df2a5ad2eeb4b 273 PANTHER PTHR22993:SF15 1 271 3.3E-104 T 25-04-2016 RJP_RS05400 df4a761ce141601c3c3df2a5ad2eeb4b 273 TIGRFAM TIGR00577 fpg: DNA-formamidopyrimidine glycosylase 1 271 8.0E-90 T 25-04-2016 IPR020629 Formamidopyrimidine-DNA glycosylase GO:0003906|GO:0006281|GO:0008270|GO:0008534 RJP_RS05400 df4a761ce141601c3c3df2a5ad2eeb4b 273 SUPERFAMILY SSF46946 133 225 9.03E-28 T 25-04-2016 IPR010979 Ribosomal protein S13-like, H2TH GO:0003676 RJP_RS05400 df4a761ce141601c3c3df2a5ad2eeb4b 273 Pfam PF06827 Zinc finger found in FPG and IleRS 244 271 2.7E-7 T 25-04-2016 IPR010663 Zinc finger, FPG/IleRS-type RJP_RS05400 df4a761ce141601c3c3df2a5ad2eeb4b 273 ProSitePatterns PS01242 Zinc finger FPG-type signature. 247 271 - T 25-04-2016 IPR015887 DNA glycosylase/AP lyase, zinc finger domain, DNA-binding site GO:0003677|GO:0003906|GO:0006281|GO:0008270|GO:0016799 RJP_RS05400 df4a761ce141601c3c3df2a5ad2eeb4b 273 Gene3D G3DSA:3.20.190.10 2 132 1.2E-32 T 25-04-2016 RJP_RS05400 df4a761ce141601c3c3df2a5ad2eeb4b 273 Pfam PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain 132 221 1.8E-25 T 25-04-2016 IPR015886 DNA glycosylase/AP lyase, H2TH DNA-binding GO:0003684|GO:0003906|GO:0006289|GO:0008270|GO:0016799 RJP_RS05400 df4a761ce141601c3c3df2a5ad2eeb4b 273 SMART SM00898 2 117 8.5E-41 T 25-04-2016 IPR012319 Formamidopyrimidine-DNA glycosylase, catalytic domain GO:0003684|GO:0003906|GO:0006284|GO:0008270|GO:0016799 RJP_RS05400 df4a761ce141601c3c3df2a5ad2eeb4b 273 SMART SM01232 132 224 1.4E-42 T 25-04-2016 IPR015886 DNA glycosylase/AP lyase, H2TH DNA-binding GO:0003684|GO:0003906|GO:0006289|GO:0008270|GO:0016799 RJP_RS05400 df4a761ce141601c3c3df2a5ad2eeb4b 273 Pfam PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain 1 116 1.0E-30 T 25-04-2016 IPR012319 Formamidopyrimidine-DNA glycosylase, catalytic domain GO:0003684|GO:0003906|GO:0006284|GO:0008270|GO:0016799 RJP_RS05400 df4a761ce141601c3c3df2a5ad2eeb4b 273 SUPERFAMILY SSF81624 2 139 3.66E-35 T 25-04-2016 IPR012319 Formamidopyrimidine-DNA glycosylase, catalytic domain GO:0003684|GO:0003906|GO:0006284|GO:0008270|GO:0016799 RJP_RS05400 df4a761ce141601c3c3df2a5ad2eeb4b 273 Hamap MF_00103 Formamidopyrimidine-DNA glycosylase [mutM]. 1 272 41.126 T 25-04-2016 IPR020629 Formamidopyrimidine-DNA glycosylase GO:0003906|GO:0006281|GO:0008270|GO:0008534 RJP_RS05400 df4a761ce141601c3c3df2a5ad2eeb4b 273 SUPERFAMILY SSF57716 220 271 1.03E-15 T 25-04-2016 RJP_RS05400 df4a761ce141601c3c3df2a5ad2eeb4b 273 PANTHER PTHR22993 1 271 3.3E-104 T 25-04-2016 RJP_RS01590 f023254a8efc71013a95e5c34f20b907 635 PANTHER PTHR11451 1 633 0.0 T 25-04-2016 RJP_RS01590 f023254a8efc71013a95e5c34f20b907 635 SUPERFAMILY SSF55681 242 525 1.09E-99 T 25-04-2016 RJP_RS01590 f023254a8efc71013a95e5c34f20b907 635 Pfam PF00587 tRNA synthetase class II core domain (G, H, P, S and T) 321 528 1.2E-41 T 25-04-2016 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 RJP_RS01590 f023254a8efc71013a95e5c34f20b907 635 PANTHER PTHR11451:SF31 1 633 0.0 T 25-04-2016 RJP_RS01590 f023254a8efc71013a95e5c34f20b907 635 Gene3D G3DSA:3.30.54.20 130 185 1.7E-23 T 25-04-2016 RJP_RS01590 f023254a8efc71013a95e5c34f20b907 635 TIGRFAM TIGR00418 thrS: threonine--tRNA ligase 72 630 1.5E-214 T 25-04-2016 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 RJP_RS01590 f023254a8efc71013a95e5c34f20b907 635 SUPERFAMILY SSF52954 528 632 1.09E-27 T 25-04-2016 IPR004154 Anticodon-binding RJP_RS01590 f023254a8efc71013a95e5c34f20b907 635 Gene3D G3DSA:3.40.50.800 530 633 2.0E-27 T 25-04-2016 IPR004154 Anticodon-binding RJP_RS01590 f023254a8efc71013a95e5c34f20b907 635 Pfam PF07973 Threonyl and Alanyl tRNA synthetase second additional domain 169 218 5.9E-14 T 25-04-2016 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0005524|GO:0016876|GO:0043039 RJP_RS01590 f023254a8efc71013a95e5c34f20b907 635 Gene3D G3DSA:3.30.930.10 241 529 8.4E-121 T 25-04-2016 RJP_RS01590 f023254a8efc71013a95e5c34f20b907 635 SMART SM00863 169 218 9.7E-24 T 25-04-2016 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0005524|GO:0016876|GO:0043039 RJP_RS01590 f023254a8efc71013a95e5c34f20b907 635 Hamap MF_00184 Threonine--tRNA ligase [thrS]. 66 633 33.41 T 25-04-2016 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 RJP_RS01590 f023254a8efc71013a95e5c34f20b907 635 SUPERFAMILY SSF81271 2 61 2.83E-15 T 25-04-2016 IPR012676 TGS-like KEGG: 00970+6.1.1.3 RJP_RS01590 f023254a8efc71013a95e5c34f20b907 635 PRINTS PR01047 Threonyl-tRNA synthetase signature 361 384 3.3E-53 T 25-04-2016 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 RJP_RS01590 f023254a8efc71013a95e5c34f20b907 635 PRINTS PR01047 Threonyl-tRNA synthetase signature 328 356 3.3E-53 T 25-04-2016 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 RJP_RS01590 f023254a8efc71013a95e5c34f20b907 635 PRINTS PR01047 Threonyl-tRNA synthetase signature 506 519 3.3E-53 T 25-04-2016 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 RJP_RS01590 f023254a8efc71013a95e5c34f20b907 635 PRINTS PR01047 Threonyl-tRNA synthetase signature 463 491 3.3E-53 T 25-04-2016 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 RJP_RS01590 f023254a8efc71013a95e5c34f20b907 635 PRINTS PR01047 Threonyl-tRNA synthetase signature 533 545 3.3E-53 T 25-04-2016 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 RJP_RS01590 f023254a8efc71013a95e5c34f20b907 635 Pfam PF03129 Anticodon binding domain 540 629 1.4E-18 T 25-04-2016 IPR004154 Anticodon-binding RJP_RS01590 f023254a8efc71013a95e5c34f20b907 635 Gene3D G3DSA:3.10.20.30 1 64 4.7E-22 T 25-04-2016 IPR012675 Beta-grasp domain RJP_RS01590 f023254a8efc71013a95e5c34f20b907 635 Pfam PF02824 TGS domain 2 61 8.9E-12 T 25-04-2016 IPR004095 TGS KEGG: 00970+6.1.1.3 RJP_RS01590 f023254a8efc71013a95e5c34f20b907 635 Gene3D G3DSA:3.30.980.10 66 129 8.3E-39 T 25-04-2016 RJP_RS01590 f023254a8efc71013a95e5c34f20b907 635 Gene3D G3DSA:3.30.980.10 187 223 8.3E-39 T 25-04-2016 RJP_RS01590 f023254a8efc71013a95e5c34f20b907 635 SUPERFAMILY SSF55186 63 240 9.29E-64 T 25-04-2016 IPR018163 Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain GO:0000166 RJP_RS01565 01589e232f53acf9fdc629650d18e5fe 86 SUPERFAMILY SSF143011 2 80 9.29E-17 T 25-04-2016 RJP_RS01565 01589e232f53acf9fdc629650d18e5fe 86 TIGRFAM TIGR02116 toxin_Txe_YoeB: addiction module toxin, Txe/YoeB family 6 85 6.7E-30 T 25-04-2016 IPR009614 Toxin YoeB GO:0004519|GO:0006401 RJP_RS01565 01589e232f53acf9fdc629650d18e5fe 86 Pfam PF06769 YoeB-like toxin of bacterial type II toxin-antitoxin system 22 85 1.8E-8 T 25-04-2016 IPR009614 Toxin YoeB GO:0004519|GO:0006401 RJP_RS05030 47b0866da5827d1711482e975fd6adee 713 PANTHER PTHR24031:SF249 319 622 3.2E-102 T 25-04-2016 RJP_RS05030 47b0866da5827d1711482e975fd6adee 713 PANTHER PTHR24031:SF249 189 302 3.2E-102 T 25-04-2016 RJP_RS05030 47b0866da5827d1711482e975fd6adee 713 PANTHER PTHR24031:SF249 647 663 3.2E-102 T 25-04-2016 RJP_RS05030 47b0866da5827d1711482e975fd6adee 713 Pfam PF17191 RecG wedge domain 21 169 7.0E-11 T 25-04-2016 IPR033454 RecG, wedge domain RJP_RS05030 47b0866da5827d1711482e975fd6adee 713 Pfam PF00271 Helicase conserved C-terminal domain 483 608 1.1E-20 T 25-04-2016 IPR001650 Helicase, C-terminal RJP_RS05030 47b0866da5827d1711482e975fd6adee 713 Gene3D G3DSA:2.40.50.140 55 138 2.2E-10 T 25-04-2016 IPR012340 Nucleic acid-binding, OB-fold RJP_RS05030 47b0866da5827d1711482e975fd6adee 713 SMART SM00490 530 609 2.8E-20 T 25-04-2016 IPR001650 Helicase, C-terminal RJP_RS05030 47b0866da5827d1711482e975fd6adee 713 Gene3D G3DSA:3.40.50.300 470 658 1.3E-43 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RJP_RS05030 47b0866da5827d1711482e975fd6adee 713 Gene3D G3DSA:3.40.50.300 277 469 2.2E-54 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RJP_RS05030 47b0866da5827d1711482e975fd6adee 713 SUPERFAMILY SSF50249 22 172 5.14E-21 T 25-04-2016 IPR012340 Nucleic acid-binding, OB-fold RJP_RS05030 47b0866da5827d1711482e975fd6adee 713 SMART SM00487 285 475 1.2E-30 T 25-04-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain RJP_RS05030 47b0866da5827d1711482e975fd6adee 713 SUPERFAMILY SSF52540 337 623 3.23E-54 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RJP_RS05030 47b0866da5827d1711482e975fd6adee 713 PANTHER PTHR24031 319 622 3.2E-102 T 25-04-2016 RJP_RS05030 47b0866da5827d1711482e975fd6adee 713 PANTHER PTHR24031 189 302 3.2E-102 T 25-04-2016 RJP_RS05030 47b0866da5827d1711482e975fd6adee 713 PANTHER PTHR24031 647 663 3.2E-102 T 25-04-2016 RJP_RS05030 47b0866da5827d1711482e975fd6adee 713 Pfam PF00270 DEAD/DEAH box helicase 290 447 5.8E-22 T 25-04-2016 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 RJP_RS02425 30dac83fe73c643f18addcb530aba346 200 PANTHER PTHR10681 1 196 8.9E-85 T 25-04-2016 RJP_RS02425 30dac83fe73c643f18addcb530aba346 200 SUPERFAMILY SSF52833 4 195 8.05E-62 T 25-04-2016 IPR012336 Thioredoxin-like fold RJP_RS02425 30dac83fe73c643f18addcb530aba346 200 Pfam PF10417 C-terminal domain of 1-Cys peroxiredoxin 160 194 1.2E-10 T 25-04-2016 IPR019479 Peroxiredoxin, C-terminal GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 RJP_RS02425 30dac83fe73c643f18addcb530aba346 200 PIRSF PIRSF000239 1 199 1.6E-58 T 25-04-2016 IPR024706 Peroxiredoxin, AhpC-type KEGG: 00480+1.11.1.15 RJP_RS02425 30dac83fe73c643f18addcb530aba346 200 Pfam PF00578 AhpC/TSA family 5 139 3.5E-34 T 25-04-2016 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15 RJP_RS02425 30dac83fe73c643f18addcb530aba346 200 Gene3D G3DSA:3.40.30.10 5 194 3.4E-68 T 25-04-2016 IPR012336 Thioredoxin-like fold RJP_RS02425 30dac83fe73c643f18addcb530aba346 200 PANTHER PTHR10681:SF22 1 196 8.9E-85 T 25-04-2016 RJP_RS02945 3a27f0d8fcf3fd6db972a7514c4499e2 242 Pfam PF07722 Peptidase C26 5 222 1.0E-71 T 25-04-2016 IPR011697 Peptidase C26 GO:0006541|GO:0016787 RJP_RS02945 3a27f0d8fcf3fd6db972a7514c4499e2 242 Gene3D G3DSA:3.40.50.880 3 240 6.4E-69 T 25-04-2016 IPR029062 Class I glutamine amidotransferase-like RJP_RS02945 3a27f0d8fcf3fd6db972a7514c4499e2 242 PANTHER PTHR11922:SF18 88 239 2.1E-49 T 25-04-2016 RJP_RS02945 3a27f0d8fcf3fd6db972a7514c4499e2 242 PANTHER PTHR11922:SF18 32 72 2.1E-49 T 25-04-2016 RJP_RS02945 3a27f0d8fcf3fd6db972a7514c4499e2 242 PANTHER PTHR11922 88 239 2.1E-49 T 25-04-2016 RJP_RS02945 3a27f0d8fcf3fd6db972a7514c4499e2 242 PANTHER PTHR11922 32 72 2.1E-49 T 25-04-2016 RJP_RS02945 3a27f0d8fcf3fd6db972a7514c4499e2 242 SUPERFAMILY SSF52317 27 240 1.18E-44 T 25-04-2016 IPR029062 Class I glutamine amidotransferase-like RJP_RS05175 a879bf6dee3f87d4a7993cfe3bb10280 109 Pfam PF00467 KOW motif 8 38 1.4E-8 T 25-04-2016 IPR005824 KOW RJP_RS05175 a879bf6dee3f87d4a7993cfe3bb10280 109 Gene3D G3DSA:2.30.30.30 3 92 6.1E-27 T 25-04-2016 IPR014722 Ribosomal protein L2 domain 2 RJP_RS05175 a879bf6dee3f87d4a7993cfe3bb10280 109 SMART SM00739 5 32 1.9E-6 T 25-04-2016 IPR005824 KOW RJP_RS05175 a879bf6dee3f87d4a7993cfe3bb10280 109 Hamap MF_01326_B 50S ribosomal protein L24 [rplX]. 4 98 21.783 T 25-04-2016 IPR003256 Ribosomal protein L24 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RJP_RS05175 a879bf6dee3f87d4a7993cfe3bb10280 109 ProSitePatterns PS01108 Ribosomal protein L24 signature. 9 26 - T 25-04-2016 IPR005825 Ribosomal protein L24/L26, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 RJP_RS05175 a879bf6dee3f87d4a7993cfe3bb10280 109 TIGRFAM TIGR01079 rplX_bact: ribosomal protein uL24 3 104 1.2E-40 T 25-04-2016 IPR003256 Ribosomal protein L24 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RJP_RS05175 a879bf6dee3f87d4a7993cfe3bb10280 109 SUPERFAMILY SSF50104 3 103 3.52E-35 T 25-04-2016 IPR008991 Translation protein SH3-like domain RJP_RS05175 a879bf6dee3f87d4a7993cfe3bb10280 109 PANTHER PTHR12903 3 104 8.0E-48 T 25-04-2016 RJP_RS05175 a879bf6dee3f87d4a7993cfe3bb10280 109 Pfam PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 41 104 9.4E-27 T 25-04-2016 IPR003256 Ribosomal protein L24 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RJP_RS05265 d8e90197f98876eb39fda879ac9cbc95 463 PANTHER PTHR11444:SF1 1 462 2.0E-251 T 25-04-2016 RJP_RS05265 d8e90197f98876eb39fda879ac9cbc95 463 SUPERFAMILY SSF48557 4 462 2.04E-149 T 25-04-2016 IPR008948 L-Aspartase-like GO:0003824 RJP_RS05265 d8e90197f98876eb39fda879ac9cbc95 463 Gene3D G3DSA:1.20.200.10 139 400 1.5E-102 T 25-04-2016 RJP_RS05265 d8e90197f98876eb39fda879ac9cbc95 463 PANTHER PTHR11444 1 462 2.0E-251 T 25-04-2016 IPR000362 Fumarate lyase family RJP_RS05265 d8e90197f98876eb39fda879ac9cbc95 463 ProSitePatterns PS00163 Fumarate lyases signature. 317 326 - T 25-04-2016 IPR020557 Fumarate lyase, conserved site GO:0003824 RJP_RS05265 d8e90197f98876eb39fda879ac9cbc95 463 PRINTS PR00149 Fumarate lyase superfamily signature 271 298 4.5E-35 T 25-04-2016 IPR000362 Fumarate lyase family RJP_RS05265 d8e90197f98876eb39fda879ac9cbc95 463 PRINTS PR00149 Fumarate lyase superfamily signature 317 333 4.5E-35 T 25-04-2016 IPR000362 Fumarate lyase family RJP_RS05265 d8e90197f98876eb39fda879ac9cbc95 463 PRINTS PR00149 Fumarate lyase superfamily signature 134 152 4.5E-35 T 25-04-2016 IPR000362 Fumarate lyase family RJP_RS05265 d8e90197f98876eb39fda879ac9cbc95 463 PRINTS PR00149 Fumarate lyase superfamily signature 180 198 4.5E-35 T 25-04-2016 IPR000362 Fumarate lyase family RJP_RS05265 d8e90197f98876eb39fda879ac9cbc95 463 PRINTS PR00145 Argininosuccinate lyase family signature 317 333 3.6E-5 T 25-04-2016 RJP_RS05265 d8e90197f98876eb39fda879ac9cbc95 463 PRINTS PR00145 Argininosuccinate lyase family signature 133 155 3.6E-5 T 25-04-2016 RJP_RS05265 d8e90197f98876eb39fda879ac9cbc95 463 PRINTS PR00145 Argininosuccinate lyase family signature 175 195 3.6E-5 T 25-04-2016 RJP_RS05265 d8e90197f98876eb39fda879ac9cbc95 463 Hamap MF_00743 Fumarate hydratase class II [fumC]. 4 462 89.772 T 25-04-2016 IPR005677 Fumarate hydratase, class II GO:0004333|GO:0006106|GO:0045239 KEGG: 00020+4.2.1.2|KEGG: 00620+4.2.1.2|KEGG: 00720+4.2.1.2|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7384|UniPathway: UPA00223 RJP_RS05265 d8e90197f98876eb39fda879ac9cbc95 463 Gene3D G3DSA:1.10.40.30 405 462 2.7E-30 T 25-04-2016 RJP_RS05265 d8e90197f98876eb39fda879ac9cbc95 463 Gene3D G3DSA:1.10.275.10 3 138 6.1E-59 T 25-04-2016 IPR024083 Fumarase/histidase, N-terminal RJP_RS05265 d8e90197f98876eb39fda879ac9cbc95 463 Pfam PF10415 Fumarase C C-terminus 408 461 1.3E-25 T 25-04-2016 IPR018951 Fumarase C, C-terminal GO:0006099|GO:0016829 KEGG: 00020+4.2.1.2|KEGG: 00620+4.2.1.2|KEGG: 00720+4.2.1.2|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7384|UniPathway: UPA00223 RJP_RS05265 d8e90197f98876eb39fda879ac9cbc95 463 Pfam PF00206 Lyase 12 342 2.5E-111 T 25-04-2016 IPR022761 Fumarate lyase, N-terminal RJP_RS05265 d8e90197f98876eb39fda879ac9cbc95 463 TIGRFAM TIGR00979 fumC_II: fumarate hydratase, class II 4 461 6.6E-247 T 25-04-2016 IPR005677 Fumarate hydratase, class II GO:0004333|GO:0006106|GO:0045239 KEGG: 00020+4.2.1.2|KEGG: 00620+4.2.1.2|KEGG: 00720+4.2.1.2|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7384|UniPathway: UPA00223 RJP_RS04565 5c496ca1ee24719d2ba36ae72a9a81fe 906 Pfam PF07517 SecA DEAD-like domain 5 389 2.4E-129 T 25-04-2016 IPR011115 SecA DEAD-like, N-terminal GO:0005524|GO:0016020|GO:0017038 RJP_RS04565 5c496ca1ee24719d2ba36ae72a9a81fe 906 SUPERFAMILY SSF52540 406 607 2.51E-55 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RJP_RS04565 5c496ca1ee24719d2ba36ae72a9a81fe 906 Pfam PF02810 SEC-C motif 886 903 1.6E-9 T 25-04-2016 IPR004027 SEC-C motif RJP_RS04565 5c496ca1ee24719d2ba36ae72a9a81fe 906 Gene3D G3DSA:3.40.50.300 406 608 8.1E-90 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RJP_RS04565 5c496ca1ee24719d2ba36ae72a9a81fe 906 Gene3D G3DSA:1.10.3060.10 637 817 5.4E-52 T 25-04-2016 IPR011116 SecA Wing/Scaffold GO:0016020|GO:0017038 RJP_RS04565 5c496ca1ee24719d2ba36ae72a9a81fe 906 PRINTS PR00906 SecA protein signature 326 348 2.0E-66 T 25-04-2016 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 RJP_RS04565 5c496ca1ee24719d2ba36ae72a9a81fe 906 PRINTS PR00906 SecA protein signature 62 86 2.0E-66 T 25-04-2016 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 RJP_RS04565 5c496ca1ee24719d2ba36ae72a9a81fe 906 PRINTS PR00906 SecA protein signature 169 189 2.0E-66 T 25-04-2016 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 RJP_RS04565 5c496ca1ee24719d2ba36ae72a9a81fe 906 PRINTS PR00906 SecA protein signature 363 380 2.0E-66 T 25-04-2016 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 RJP_RS04565 5c496ca1ee24719d2ba36ae72a9a81fe 906 PRINTS PR00906 SecA protein signature 116 126 2.0E-66 T 25-04-2016 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 RJP_RS04565 5c496ca1ee24719d2ba36ae72a9a81fe 906 PRINTS PR00906 SecA protein signature 400 413 2.0E-66 T 25-04-2016 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 RJP_RS04565 5c496ca1ee24719d2ba36ae72a9a81fe 906 PRINTS PR00906 SecA protein signature 100 114 2.0E-66 T 25-04-2016 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 RJP_RS04565 5c496ca1ee24719d2ba36ae72a9a81fe 906 Gene3D G3DSA:3.90.1440.10 230 355 7.3E-44 T 25-04-2016 IPR011130 SecA preprotein, cross-linking domain GO:0016020|GO:0017038 RJP_RS04565 5c496ca1ee24719d2ba36ae72a9a81fe 906 SUPERFAMILY SSF81767 226 355 4.05E-41 T 25-04-2016 IPR011130 SecA preprotein, cross-linking domain GO:0016020|GO:0017038 RJP_RS04565 5c496ca1ee24719d2ba36ae72a9a81fe 906 SMART SM00958 227 345 9.0E-67 T 25-04-2016 IPR011130 SecA preprotein, cross-linking domain GO:0016020|GO:0017038 RJP_RS04565 5c496ca1ee24719d2ba36ae72a9a81fe 906 Gene3D G3DSA:3.40.50.300 356 402 1.2E-124 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RJP_RS04565 5c496ca1ee24719d2ba36ae72a9a81fe 906 Gene3D G3DSA:3.40.50.300 3 227 1.2E-124 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RJP_RS04565 5c496ca1ee24719d2ba36ae72a9a81fe 906 SMART SM00957 5 389 9.7E-287 T 25-04-2016 IPR011115 SecA DEAD-like, N-terminal GO:0005524|GO:0016020|GO:0017038 RJP_RS04565 5c496ca1ee24719d2ba36ae72a9a81fe 906 Pfam PF07516 SecA Wing and Scaffold domain 606 815 4.9E-60 T 25-04-2016 IPR011116 SecA Wing/Scaffold GO:0016020|GO:0017038 RJP_RS04565 5c496ca1ee24719d2ba36ae72a9a81fe 906 TIGRFAM TIGR00963 secA: preprotein translocase, SecA subunit 27 804 0.0 T 25-04-2016 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 RJP_RS04565 5c496ca1ee24719d2ba36ae72a9a81fe 906 Pfam PF01043 SecA preprotein cross-linking domain 231 345 7.1E-35 T 25-04-2016 IPR011130 SecA preprotein, cross-linking domain GO:0016020|GO:0017038 RJP_RS04565 5c496ca1ee24719d2ba36ae72a9a81fe 906 SUPERFAMILY SSF81886 882 894 5.36E-74 T 25-04-2016 IPR011116 SecA Wing/Scaffold GO:0016020|GO:0017038 RJP_RS04565 5c496ca1ee24719d2ba36ae72a9a81fe 906 SUPERFAMILY SSF81886 609 827 5.36E-74 T 25-04-2016 IPR011116 SecA Wing/Scaffold GO:0016020|GO:0017038 RJP_RS04565 5c496ca1ee24719d2ba36ae72a9a81fe 906 Hamap MF_01382 Protein translocase subunit SecA [secA]. 4 819 19.535 T 25-04-2016 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 RJP_RS04565 5c496ca1ee24719d2ba36ae72a9a81fe 906 ProSitePatterns PS01312 SecA family signature. 487 502 - T 25-04-2016 IPR020937 SecA conserved site GO:0006605|GO:0006886|GO:0016020 RJP_RS04565 5c496ca1ee24719d2ba36ae72a9a81fe 906 SUPERFAMILY SSF52540 355 402 6.8E-85 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RJP_RS04565 5c496ca1ee24719d2ba36ae72a9a81fe 906 SUPERFAMILY SSF52540 3 227 6.8E-85 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RJP_RS04565 5c496ca1ee24719d2ba36ae72a9a81fe 906 PANTHER PTHR30612 539 906 0.0 T 25-04-2016 RJP_RS04565 5c496ca1ee24719d2ba36ae72a9a81fe 906 PANTHER PTHR30612 1 507 0.0 T 25-04-2016 RJP_RS03640 1f9c47b19de7b074bfd0763a1ca954f7 587 PANTHER PTHR30255:SF2 6 583 2.9E-205 T 25-04-2016 RJP_RS03640 1f9c47b19de7b074bfd0763a1ca954f7 587 PANTHER PTHR30255 6 583 2.9E-205 T 25-04-2016 RJP_RS03640 1f9c47b19de7b074bfd0763a1ca954f7 587 Pfam PF02272 DHHA1 domain 386 451 4.2E-13 T 25-04-2016 IPR003156 DHHA1 domain GO:0003676 KEGG: 00970+6.1.1.7 RJP_RS03640 1f9c47b19de7b074bfd0763a1ca954f7 587 Pfam PF01368 DHH family 86 220 2.6E-11 T 25-04-2016 IPR001667 DDH domain RJP_RS03640 1f9c47b19de7b074bfd0763a1ca954f7 587 TIGRFAM TIGR00644 recJ: single-stranded-DNA-specific exonuclease RecJ 32 583 1.1E-181 T 25-04-2016 IPR004610 Bacterial RecJ exonuclease GO:0006281|GO:0006310|GO:0008409 RJP_RS03640 1f9c47b19de7b074bfd0763a1ca954f7 587 SUPERFAMILY SSF64182 61 455 2.22E-111 T 25-04-2016 RJP_RS03720 c56214e5c8ea3d92cdeea7b80fb5d9d6 219 Hamap MF_00238 Cytidylate kinase [cmk]. 15 218 27.864 T 25-04-2016 IPR003136 Cytidylate kinase GO:0004127|GO:0005524|GO:0006139 MetaCyc: PWY-7205 RJP_RS03720 c56214e5c8ea3d92cdeea7b80fb5d9d6 219 Gene3D G3DSA:3.40.50.300 14 215 1.3E-64 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RJP_RS03720 c56214e5c8ea3d92cdeea7b80fb5d9d6 219 Pfam PF02224 Cytidylate kinase 17 215 3.0E-68 T 25-04-2016 IPR011994 Cytidylate kinase domain GO:0004127|GO:0005524|GO:0006139 MetaCyc: PWY-7205 RJP_RS03720 c56214e5c8ea3d92cdeea7b80fb5d9d6 219 TIGRFAM TIGR00017 cmk: cytidylate kinase 14 212 6.0E-51 T 25-04-2016 IPR003136 Cytidylate kinase GO:0004127|GO:0005524|GO:0006139 MetaCyc: PWY-7205 RJP_RS03720 c56214e5c8ea3d92cdeea7b80fb5d9d6 219 PANTHER PTHR21299 20 218 1.4E-32 T 25-04-2016 RJP_RS03720 c56214e5c8ea3d92cdeea7b80fb5d9d6 219 SUPERFAMILY SSF52540 15 217 9.35E-36 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RJP_RS00045 b9fb043d679274bf633416b76a8aa76e 264 PIRSF PIRSF000456 2 264 3.8E-101 T 25-04-2016 IPR010137 Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase GO:0008610|GO:0008780 KEGG: 00010+2.3.1.12|KEGG: 00020+2.3.1.12|KEGG: 00540+2.3.1.129|KEGG: 00620+2.3.1.12|UniPathway: UPA00359 RJP_RS00045 b9fb043d679274bf633416b76a8aa76e 264 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 15 50 4.9E-8 T 25-04-2016 IPR001451 Hexapeptide repeat RJP_RS00045 b9fb043d679274bf633416b76a8aa76e 264 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 107 140 1.7E-7 T 25-04-2016 IPR001451 Hexapeptide repeat RJP_RS00045 b9fb043d679274bf633416b76a8aa76e 264 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 151 179 - T 25-04-2016 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: REACT_17015 RJP_RS00045 b9fb043d679274bf633416b76a8aa76e 264 PANTHER PTHR23416:SF8 6 252 3.7E-102 T 25-04-2016 RJP_RS00045 b9fb043d679274bf633416b76a8aa76e 264 PANTHER PTHR23416 6 252 3.7E-102 T 25-04-2016 RJP_RS00045 b9fb043d679274bf633416b76a8aa76e 264 Gene3D G3DSA:1.20.1180.10 195 261 1.7E-9 T 25-04-2016 IPR029098 Udp N-acetylglucosamine O-acyltransferase, C-terminal KEGG: 00010+2.3.1.12|KEGG: 00020+2.3.1.12|KEGG: 00540+2.3.1.129|KEGG: 00620+2.3.1.12|UniPathway: UPA00359 RJP_RS00045 b9fb043d679274bf633416b76a8aa76e 264 Hamap MF_00387 Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase [lpxA]. 3 261 42.788 T 25-04-2016 IPR010137 Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase GO:0008610|GO:0008780 KEGG: 00010+2.3.1.12|KEGG: 00020+2.3.1.12|KEGG: 00540+2.3.1.129|KEGG: 00620+2.3.1.12|UniPathway: UPA00359 RJP_RS00045 b9fb043d679274bf633416b76a8aa76e 264 Pfam PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 178 260 7.6E-15 T 25-04-2016 IPR029098 Udp N-acetylglucosamine O-acyltransferase, C-terminal KEGG: 00010+2.3.1.12|KEGG: 00020+2.3.1.12|KEGG: 00540+2.3.1.129|KEGG: 00620+2.3.1.12|UniPathway: UPA00359 RJP_RS00045 b9fb043d679274bf633416b76a8aa76e 264 TIGRFAM TIGR01852 lipid_A_lpxA: acyl-[acyl-carrier-protein]-UDP-N-acetylglucosamine O-acyltransferase 6 260 4.0E-105 T 25-04-2016 IPR010137 Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase GO:0008610|GO:0008780 KEGG: 00010+2.3.1.12|KEGG: 00020+2.3.1.12|KEGG: 00540+2.3.1.129|KEGG: 00620+2.3.1.12|UniPathway: UPA00359 RJP_RS00045 b9fb043d679274bf633416b76a8aa76e 264 Gene3D G3DSA:2.160.10.10 5 186 1.6E-42 T 25-04-2016 RJP_RS00045 b9fb043d679274bf633416b76a8aa76e 264 SUPERFAMILY SSF51161 4 257 4.32E-62 T 25-04-2016 IPR011004 Trimeric LpxA-like RJP_RS04320 f57f48701cc9c3074dbfdb007fb80ebb 1892 SMART SM01359 1013 1152 6.4E-20 T 25-04-2016 IPR011625 Alpha-2-macroglobulin, N-terminal 2 RJP_RS04320 f57f48701cc9c3074dbfdb007fb80ebb 1892 Pfam PF11974 Alpha-2-macroglobulin MG1 domain 538 638 3.4E-12 T 25-04-2016 IPR021868 Alpha-2-macroglobulin MG1 domain RJP_RS04320 f57f48701cc9c3074dbfdb007fb80ebb 1892 SUPERFAMILY SSF48239 1433 1629 3.14E-17 T 25-04-2016 IPR008930 Terpenoid cyclases/protein prenyltransferase alpha-alpha toroid RJP_RS04320 f57f48701cc9c3074dbfdb007fb80ebb 1892 Pfam PF00207 Alpha-2-macroglobulin family 1220 1306 1.1E-11 T 25-04-2016 IPR001599 Alpha-2-macroglobulin GO:0004866 RJP_RS04320 f57f48701cc9c3074dbfdb007fb80ebb 1892 PANTHER PTHR40094:SF1 71 1891 1.2E-150 T 25-04-2016 RJP_RS04320 f57f48701cc9c3074dbfdb007fb80ebb 1892 Pfam PF01835 MG2 domain 647 746 1.7E-15 T 25-04-2016 IPR002890 Alpha-2-macroglobulin, N-terminal GO:0004866 RJP_RS04320 f57f48701cc9c3074dbfdb007fb80ebb 1892 PANTHER PTHR40094 71 1891 1.2E-150 T 25-04-2016 RJP_RS04320 f57f48701cc9c3074dbfdb007fb80ebb 1892 SMART SM01360 1219 1308 3.7E-21 T 25-04-2016 IPR001599 Alpha-2-macroglobulin GO:0004866 RJP_RS04320 f57f48701cc9c3074dbfdb007fb80ebb 1892 Gene3D G3DSA:1.50.10.20 1434 1621 2.6E-15 T 25-04-2016 IPR008930 Terpenoid cyclases/protein prenyltransferase alpha-alpha toroid RJP_RS00885 836537404f9b6575fec527738da4485f 101 SUPERFAMILY SSF81301 10 97 1.68E-14 T 25-04-2016 RJP_RS00885 836537404f9b6575fec527738da4485f 101 Pfam PF01909 Nucleotidyltransferase domain 11 94 1.4E-10 T 25-04-2016 IPR002934 Polymerase, nucleotidyl transferase domain GO:0016779 RJP_RS00885 836537404f9b6575fec527738da4485f 101 Gene3D G3DSA:3.30.460.10 10 99 8.6E-22 T 25-04-2016 RJP_RS06490 94c5b6627dc102ce3e0cb63a0ad7e984 2171 Gene3D G3DSA:2.40.128.130 1883 2171 3.1E-45 T 25-04-2016 IPR005546 Autotransporter beta-domain RJP_RS06490 94c5b6627dc102ce3e0cb63a0ad7e984 2171 SMART SM00869 1888 2161 1.7E-40 T 25-04-2016 IPR005546 Autotransporter beta-domain RJP_RS06490 94c5b6627dc102ce3e0cb63a0ad7e984 2171 SUPERFAMILY SSF103515 1850 2171 1.22E-50 T 25-04-2016 IPR005546 Autotransporter beta-domain RJP_RS06490 94c5b6627dc102ce3e0cb63a0ad7e984 2171 Pfam PF03797 Autotransporter beta-domain 1887 2157 1.4E-49 T 25-04-2016 IPR005546 Autotransporter beta-domain RJP_RS06490 94c5b6627dc102ce3e0cb63a0ad7e984 2171 TIGRFAM TIGR01414 autotrans_barl: outer membrane autotransporter barrel domain 1694 2171 1.9E-83 T 25-04-2016 IPR006315 Outer membrane autotransporter barrel GO:0019867 RJP_RS06455 cfaeda8cef22ddb9c965d9d1a1bd64f2 305 PANTHER PTHR30349 4 302 6.4E-64 T 25-04-2016 RJP_RS06455 cfaeda8cef22ddb9c965d9d1a1bd64f2 305 Gene3D G3DSA:1.10.150.130 7 101 1.7E-18 T 25-04-2016 IPR023109 Integrase/recombinase, N-terminal RJP_RS06455 cfaeda8cef22ddb9c965d9d1a1bd64f2 305 SUPERFAMILY SSF56349 6 293 1.5E-45 T 25-04-2016 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 RJP_RS06455 cfaeda8cef22ddb9c965d9d1a1bd64f2 305 Pfam PF02899 Phage integrase, N-terminal SAM-like domain 10 95 3.0E-21 T 25-04-2016 IPR004107 Integrase, SAM-like, N-terminal GO:0003677|GO:0015074 RJP_RS06455 cfaeda8cef22ddb9c965d9d1a1bd64f2 305 Hamap MF_01808 Tyrosine recombinase XerC [xerC]. 6 304 29.72 T 25-04-2016 IPR023009 Tyrosine recombinase XerC/XerD RJP_RS06455 cfaeda8cef22ddb9c965d9d1a1bd64f2 305 Pfam PF00589 Phage integrase family 126 288 2.1E-30 T 25-04-2016 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 RJP_RS06455 cfaeda8cef22ddb9c965d9d1a1bd64f2 305 Gene3D G3DSA:1.10.443.10 120 297 2.3E-41 T 25-04-2016 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 RJP_RS06455 cfaeda8cef22ddb9c965d9d1a1bd64f2 305 PANTHER PTHR30349:SF5 4 302 6.4E-64 T 25-04-2016 RJP_RS05645 1ba6de9312faa4de45f297eca3c93f08 95 PANTHER PTHR33175 3 91 5.8E-16 T 25-04-2016 RJP_RS05645 1ba6de9312faa4de45f297eca3c93f08 95 Pfam PF00216 Bacterial DNA-binding protein 4 91 2.9E-18 T 25-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 RJP_RS05645 1ba6de9312faa4de45f297eca3c93f08 95 Gene3D G3DSA:4.10.520.10 4 92 1.4E-19 T 25-04-2016 IPR010992 Integration host factor (IHF)-like DNA-binding domain GO:0003677 RJP_RS05645 1ba6de9312faa4de45f297eca3c93f08 95 SUPERFAMILY SSF47729 3 92 1.77E-19 T 25-04-2016 IPR010992 Integration host factor (IHF)-like DNA-binding domain GO:0003677 RJP_RS05645 1ba6de9312faa4de45f297eca3c93f08 95 SMART SM00411 3 91 9.1E-23 T 25-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 RJP_RS04235 cc6d50474fdf60a3f04371530be1fbc0 503 SUPERFAMILY SSF69705 6 129 9.02E-38 T 25-04-2016 IPR013735 Transcription factor NusA, N-terminal GO:0003700|GO:0031554 RJP_RS04235 cc6d50474fdf60a3f04371530be1fbc0 503 Pfam PF08529 NusA N-terminal domain 8 128 8.0E-31 T 25-04-2016 IPR013735 Transcription factor NusA, N-terminal GO:0003700|GO:0031554 RJP_RS04235 cc6d50474fdf60a3f04371530be1fbc0 503 Pfam PF14520 Helix-hairpin-helix domain 377 413 0.0012 T 25-04-2016 RJP_RS04235 cc6d50474fdf60a3f04371530be1fbc0 503 Pfam PF00575 S1 RNA binding domain 135 197 1.0E-5 T 25-04-2016 IPR003029 S1 domain GO:0003676 RJP_RS04235 cc6d50474fdf60a3f04371530be1fbc0 503 SUPERFAMILY SSF54814 205 281 3.92E-28 T 25-04-2016 IPR009019 K homology domain, prokaryotic type GO:0003723 RJP_RS04235 cc6d50474fdf60a3f04371530be1fbc0 503 SMART SM00316 137 203 7.3E-10 T 25-04-2016 IPR022967 RNA-binding domain, S1 RJP_RS04235 cc6d50474fdf60a3f04371530be1fbc0 503 Hamap MF_00945_B Transcription termination/antitermination protein NusA [nusA]. 6 416 29.002 T 25-04-2016 IPR030842 Transcription termination/antitermination protein NusA, bacterial GO:0006353|GO:0031564 RJP_RS04235 cc6d50474fdf60a3f04371530be1fbc0 503 PANTHER PTHR22648:SF0 5 454 2.2E-146 T 25-04-2016 RJP_RS04235 cc6d50474fdf60a3f04371530be1fbc0 503 Gene3D G3DSA:2.40.50.140 133 201 1.4E-27 T 25-04-2016 IPR012340 Nucleic acid-binding, OB-fold RJP_RS04235 cc6d50474fdf60a3f04371530be1fbc0 503 SMART SM00322 307 383 8.8E-5 T 25-04-2016 IPR004087 K Homology domain GO:0003676 RJP_RS04235 cc6d50474fdf60a3f04371530be1fbc0 503 Gene3D G3DSA:3.30.300.20 281 352 1.0E-27 T 25-04-2016 IPR015946 K homology domain-like, alpha/beta RJP_RS04235 cc6d50474fdf60a3f04371530be1fbc0 503 SUPERFAMILY SSF47794 355 421 8.32E-11 T 25-04-2016 IPR010995 DNA repair Rad51/transcription factor NusA, alpha-helical GO:0000166 RJP_RS04235 cc6d50474fdf60a3f04371530be1fbc0 503 Gene3D G3DSA:1.10.150.20 435 497 1.7E-7 T 25-04-2016 RJP_RS04235 cc6d50474fdf60a3f04371530be1fbc0 503 Gene3D G3DSA:1.10.150.20 362 420 2.8E-12 T 25-04-2016 RJP_RS04235 cc6d50474fdf60a3f04371530be1fbc0 503 SUPERFAMILY SSF47794 436 497 6.28E-5 T 25-04-2016 IPR010995 DNA repair Rad51/transcription factor NusA, alpha-helical GO:0000166 RJP_RS04235 cc6d50474fdf60a3f04371530be1fbc0 503 TIGRFAM TIGR01954 nusA_Cterm_rpt: transcription termination factor NusA, C-terminal duplication 371 420 1.5E-18 T 25-04-2016 IPR010214 Transcription termination factor NusA, C-terminal duplication RJP_RS04235 cc6d50474fdf60a3f04371530be1fbc0 503 SUPERFAMILY SSF50249 135 202 4.29E-18 T 25-04-2016 IPR012340 Nucleic acid-binding, OB-fold RJP_RS04235 cc6d50474fdf60a3f04371530be1fbc0 503 PANTHER PTHR22648 5 454 2.2E-146 T 25-04-2016 RJP_RS04235 cc6d50474fdf60a3f04371530be1fbc0 503 Gene3D G3DSA:3.30.1480.10 6 128 4.5E-39 T 25-04-2016 IPR013735 Transcription factor NusA, N-terminal GO:0003700|GO:0031554 RJP_RS04235 cc6d50474fdf60a3f04371530be1fbc0 503 Pfam PF13184 NusA-like KH domain 233 295 1.2E-23 T 25-04-2016 IPR025249 KH domain, NusA-like GO:0003723 RJP_RS04235 cc6d50474fdf60a3f04371530be1fbc0 503 SUPERFAMILY SSF54814 282 348 3.92E-13 T 25-04-2016 IPR009019 K homology domain, prokaryotic type GO:0003723 RJP_RS04235 cc6d50474fdf60a3f04371530be1fbc0 503 Gene3D G3DSA:3.30.300.20 203 280 5.6E-32 T 25-04-2016 IPR015946 K homology domain-like, alpha/beta RJP_RS04235 cc6d50474fdf60a3f04371530be1fbc0 503 TIGRFAM TIGR01953 NusA: transcription termination factor NusA 8 349 1.0E-117 T 25-04-2016 IPR010213 Transcription termination factor NusA GO:0003723 RJP_RS05440 70ebbd261f70b469ad85870f7851c43c 323 ProSitePatterns PS01090 TatD deoxyribonuclease family signature 2. 183 193 - T 25-04-2016 IPR018228 Deoxyribonuclease, TatD-related, conserved site GO:0016888 RJP_RS05440 70ebbd261f70b469ad85870f7851c43c 323 TIGRFAM TIGR00010 TIGR00010: hydrolase, TatD family 136 313 2.6E-78 T 25-04-2016 IPR015991 Uncharacterised deoxyribonuclease TatD-type GO:0004536 RJP_RS05440 70ebbd261f70b469ad85870f7851c43c 323 TIGRFAM TIGR03777 RPE4: rickettsial palindromic element RPE4 domain 15 46 5.6E-12 T 25-04-2016 IPR022439 Rickettsia palindromic element RPE4 RJP_RS05440 70ebbd261f70b469ad85870f7851c43c 323 Gene3D G3DSA:3.20.20.140 49 313 5.0E-83 T 25-04-2016 RJP_RS05440 70ebbd261f70b469ad85870f7851c43c 323 Gene3D G3DSA:3.20.20.140 1 16 5.0E-83 T 25-04-2016 RJP_RS05440 70ebbd261f70b469ad85870f7851c43c 323 PANTHER PTHR10060:SF20 1 16 8.4E-125 T 25-04-2016 RJP_RS05440 70ebbd261f70b469ad85870f7851c43c 323 PANTHER PTHR10060:SF20 132 316 8.4E-125 T 25-04-2016 RJP_RS05440 70ebbd261f70b469ad85870f7851c43c 323 PANTHER PTHR10060:SF20 44 107 8.4E-125 T 25-04-2016 RJP_RS05440 70ebbd261f70b469ad85870f7851c43c 323 PIRSF PIRSF005902 1 317 4.9E-93 T 25-04-2016 IPR001130 TatD family GO:0016788 RJP_RS05440 70ebbd261f70b469ad85870f7851c43c 323 ProSitePatterns PS01137 TatD deoxyribonuclease family signature 1. 2 10 - T 25-04-2016 IPR018228 Deoxyribonuclease, TatD-related, conserved site GO:0016888 RJP_RS05440 70ebbd261f70b469ad85870f7851c43c 323 Pfam PF01026 TatD related DNase 3 313 7.3E-78 T 25-04-2016 IPR001130 TatD family GO:0016788 RJP_RS05440 70ebbd261f70b469ad85870f7851c43c 323 SUPERFAMILY SSF51556 49 104 3.29E-79 T 25-04-2016 IPR032466 Metal-dependent hydrolase RJP_RS05440 70ebbd261f70b469ad85870f7851c43c 323 SUPERFAMILY SSF51556 134 314 3.29E-79 T 25-04-2016 IPR032466 Metal-dependent hydrolase RJP_RS05440 70ebbd261f70b469ad85870f7851c43c 323 SUPERFAMILY SSF51556 1 17 3.29E-79 T 25-04-2016 IPR032466 Metal-dependent hydrolase RJP_RS05440 70ebbd261f70b469ad85870f7851c43c 323 PANTHER PTHR10060 1 16 8.4E-125 T 25-04-2016 IPR001130 TatD family GO:0016788 RJP_RS05440 70ebbd261f70b469ad85870f7851c43c 323 PANTHER PTHR10060 132 316 8.4E-125 T 25-04-2016 IPR001130 TatD family GO:0016788 RJP_RS05440 70ebbd261f70b469ad85870f7851c43c 323 PANTHER PTHR10060 44 107 8.4E-125 T 25-04-2016 IPR001130 TatD family GO:0016788 RJP_RS06535 a37dd5a9b2603161a99bb0725f5559ef 224 SUPERFAMILY SSF56925 28 222 1.99E-15 T 25-04-2016 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 RJP_RS06535 a37dd5a9b2603161a99bb0725f5559ef 224 Gene3D G3DSA:2.40.160.20 13 222 4.0E-19 T 25-04-2016 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 RJP_RS06535 a37dd5a9b2603161a99bb0725f5559ef 224 Pfam PF13505 Outer membrane protein beta-barrel domain 10 222 2.3E-11 T 25-04-2016 IPR027385 Outer membrane protein beta-barrel RJP_RS02165 1d19aec7d5d5fabf4f0929bfcf5298c5 258 PRINTS PR00377 Inositol monophosphatase superfamily signature 79 95 6.1E-5 T 25-04-2016 IPR000760 Inositol monophosphatase GO:0046854 RJP_RS02165 1d19aec7d5d5fabf4f0929bfcf5298c5 258 PRINTS PR00377 Inositol monophosphatase superfamily signature 37 57 6.1E-5 T 25-04-2016 IPR000760 Inositol monophosphatase GO:0046854 RJP_RS02165 1d19aec7d5d5fabf4f0929bfcf5298c5 258 Gene3D G3DSA:3.40.190.80 148 246 5.2E-35 T 25-04-2016 RJP_RS02165 1d19aec7d5d5fabf4f0929bfcf5298c5 258 SUPERFAMILY SSF56655 3 245 4.06E-56 T 25-04-2016 RJP_RS02165 1d19aec7d5d5fabf4f0929bfcf5298c5 258 ProSitePatterns PS00629 Inositol monophosphatase family signature 1. 79 92 - T 25-04-2016 IPR020583 Inositol monophosphatase, metal-binding site RJP_RS02165 1d19aec7d5d5fabf4f0929bfcf5298c5 258 ProSitePatterns PS00630 Inositol monophosphatase family signature 2. 205 219 - T 25-04-2016 IPR020550 Inositol monophosphatase, conserved site GO:0046854 RJP_RS02165 1d19aec7d5d5fabf4f0929bfcf5298c5 258 Pfam PF00459 Inositol monophosphatase family 32 240 1.3E-45 T 25-04-2016 IPR000760 Inositol monophosphatase GO:0046854 RJP_RS02165 1d19aec7d5d5fabf4f0929bfcf5298c5 258 Gene3D G3DSA:3.30.540.10 4 147 3.2E-28 T 25-04-2016 RJP_RS02165 1d19aec7d5d5fabf4f0929bfcf5298c5 258 PANTHER PTHR20854:SF5 4 241 1.6E-44 T 25-04-2016 RJP_RS02165 1d19aec7d5d5fabf4f0929bfcf5298c5 258 PANTHER PTHR20854 4 241 1.6E-44 T 25-04-2016 IPR000760 Inositol monophosphatase GO:0046854 RJP_RS06710 677a45db633115318f1108ebb0355ae9 288 SUPERFAMILY SSF55681 5 286 2.34E-125 T 25-04-2016 RJP_RS06710 677a45db633115318f1108ebb0355ae9 288 Pfam PF02091 Glycyl-tRNA synthetase alpha subunit 6 286 2.0E-137 T 25-04-2016 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 RJP_RS06710 677a45db633115318f1108ebb0355ae9 288 Gene3D G3DSA:1.20.58.180 213 287 1.6E-29 T 25-04-2016 RJP_RS06710 677a45db633115318f1108ebb0355ae9 288 Hamap MF_00254 Glycine--tRNA ligase alpha subunit [glyQ]. 4 288 56.419 T 25-04-2016 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 RJP_RS06710 677a45db633115318f1108ebb0355ae9 288 Gene3D G3DSA:3.30.930.10 2 210 1.3E-95 T 25-04-2016 RJP_RS06710 677a45db633115318f1108ebb0355ae9 288 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 79 99 6.4E-61 T 25-04-2016 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 RJP_RS06710 677a45db633115318f1108ebb0355ae9 288 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 58 73 6.4E-61 T 25-04-2016 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 RJP_RS06710 677a45db633115318f1108ebb0355ae9 288 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 249 265 6.4E-61 T 25-04-2016 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 RJP_RS06710 677a45db633115318f1108ebb0355ae9 288 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 159 174 6.4E-61 T 25-04-2016 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 RJP_RS06710 677a45db633115318f1108ebb0355ae9 288 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 110 134 6.4E-61 T 25-04-2016 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 RJP_RS06710 677a45db633115318f1108ebb0355ae9 288 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 136 156 6.4E-61 T 25-04-2016 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 RJP_RS06710 677a45db633115318f1108ebb0355ae9 288 PANTHER PTHR30075 4 279 4.3E-181 T 25-04-2016 RJP_RS06710 677a45db633115318f1108ebb0355ae9 288 TIGRFAM TIGR00388 glyQ: glycine--tRNA ligase, alpha subunit 5 285 2.9E-132 T 25-04-2016 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 RJP_RS06060 bad6f791243738cc71695d7c9122f24d 428 Gene3D G3DSA:3.40.47.10 278 425 1.3E-57 T 25-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 RJP_RS06060 bad6f791243738cc71695d7c9122f24d 428 PANTHER PTHR11712 1 428 3.6E-196 T 25-04-2016 RJP_RS06060 bad6f791243738cc71695d7c9122f24d 428 Pfam PF02801 Beta-ketoacyl synthase, C-terminal domain 269 383 2.4E-36 T 25-04-2016 IPR014031 Beta-ketoacyl synthase, C-terminal RJP_RS06060 bad6f791243738cc71695d7c9122f24d 428 SUPERFAMILY SSF53901 229 425 1.05E-68 T 25-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 RJP_RS06060 bad6f791243738cc71695d7c9122f24d 428 SMART SM00825 Beta-ketoacyl synthase 10 428 2.0E-17 T 25-04-2016 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain RJP_RS06060 bad6f791243738cc71695d7c9122f24d 428 SUPERFAMILY SSF53901 8 268 5.76E-73 T 25-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 RJP_RS06060 bad6f791243738cc71695d7c9122f24d 428 ProSitePatterns PS00606 Beta-ketoacyl synthases active site. 168 184 - T 25-04-2016 IPR018201 Beta-ketoacyl synthase, active site RJP_RS06060 bad6f791243738cc71695d7c9122f24d 428 TIGRFAM TIGR03150 fabF: beta-ketoacyl-acyl-carrier-protein synthase II 8 424 8.0E-186 T 25-04-2016 IPR017568 3-oxoacyl-[acyl-carrier-protein] synthase 2 GO:0006633|GO:0016747 UniPathway: UPA00094 RJP_RS06060 bad6f791243738cc71695d7c9122f24d 428 Gene3D G3DSA:3.40.47.10 4 274 1.2E-74 T 25-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 RJP_RS06060 bad6f791243738cc71695d7c9122f24d 428 Pfam PF00109 Beta-ketoacyl synthase, N-terminal domain 8 261 6.5E-61 T 25-04-2016 IPR014030 Beta-ketoacyl synthase, N-terminal RJP_RS06060 bad6f791243738cc71695d7c9122f24d 428 PIRSF PIRSF000447 5 427 1.0E-176 T 25-04-2016 IPR017568 3-oxoacyl-[acyl-carrier-protein] synthase 2 GO:0006633|GO:0016747 UniPathway: UPA00094 RJP_RS06060 bad6f791243738cc71695d7c9122f24d 428 PANTHER PTHR11712:SF273 1 428 3.6E-196 T 25-04-2016 RJP_RS05680 9ed272f0c9dc3d5ad77b399f14083288 689 Hamap MF_01588 DNA ligase [ligA]. 10 686 47.569 T 25-04-2016 IPR001679 NAD-dependent DNA ligase GO:0003911|GO:0006260|GO:0006281 RJP_RS05680 9ed272f0c9dc3d5ad77b399f14083288 689 Gene3D G3DSA:1.10.150.20 440 514 1.0E-24 T 25-04-2016 RJP_RS05680 9ed272f0c9dc3d5ad77b399f14083288 689 SUPERFAMILY SSF50249 326 405 1.88E-26 T 25-04-2016 IPR012340 Nucleic acid-binding, OB-fold RJP_RS05680 9ed272f0c9dc3d5ad77b399f14083288 689 SMART SM00292 612 689 6.6E-11 T 25-04-2016 IPR001357 BRCT domain RJP_RS05680 9ed272f0c9dc3d5ad77b399f14083288 689 Gene3D G3DSA:3.40.50.10190 612 687 6.2E-21 T 25-04-2016 IPR001357 BRCT domain RJP_RS05680 9ed272f0c9dc3d5ad77b399f14083288 689 PIRSF PIRSF001604 3 689 6.8E-251 T 25-04-2016 IPR001679 NAD-dependent DNA ligase GO:0003911|GO:0006260|GO:0006281 RJP_RS05680 9ed272f0c9dc3d5ad77b399f14083288 689 SMART SM00532 11 453 2.3E-260 T 25-04-2016 IPR013840 NAD-dependent DNA ligase, N-terminal GO:0003911 RJP_RS05680 9ed272f0c9dc3d5ad77b399f14083288 689 Pfam PF12826 Helix-hairpin-helix motif 521 594 1.4E-12 T 25-04-2016 RJP_RS05680 9ed272f0c9dc3d5ad77b399f14083288 689 ProSitePatterns PS01056 NAD-dependent DNA ligase signature 2. 336 351 - T 25-04-2016 IPR033136 NAD-dependent DNA ligase, conserved site RJP_RS05680 9ed272f0c9dc3d5ad77b399f14083288 689 Pfam PF01653 NAD-dependent DNA ligase adenylation domain 11 322 2.6E-119 T 25-04-2016 IPR013839 NAD-dependent DNA ligase, adenylation GO:0003911 RJP_RS05680 9ed272f0c9dc3d5ad77b399f14083288 689 Pfam PF00533 BRCA1 C Terminus (BRCT) domain 615 686 7.1E-12 T 25-04-2016 IPR001357 BRCT domain RJP_RS05680 9ed272f0c9dc3d5ad77b399f14083288 689 PANTHER PTHR23389 9 544 1.9E-171 T 25-04-2016 RJP_RS05680 9ed272f0c9dc3d5ad77b399f14083288 689 Pfam PF03120 NAD-dependent DNA ligase OB-fold domain 326 403 5.7E-35 T 25-04-2016 IPR004150 NAD-dependent DNA ligase, OB-fold GO:0003911|GO:0006260|GO:0006281 RJP_RS05680 9ed272f0c9dc3d5ad77b399f14083288 689 Gene3D G3DSA:1.10.150.20 515 599 1.8E-20 T 25-04-2016 RJP_RS05680 9ed272f0c9dc3d5ad77b399f14083288 689 SUPERFAMILY SSF56091 9 321 7.61E-114 T 25-04-2016 RJP_RS05680 9ed272f0c9dc3d5ad77b399f14083288 689 SUPERFAMILY SSF47781 410 597 1.73E-45 T 25-04-2016 IPR010994 RuvA domain 2-like Reactome: REACT_216 RJP_RS05680 9ed272f0c9dc3d5ad77b399f14083288 689 TIGRFAM TIGR00575 dnlj: DNA ligase, NAD-dependent 19 682 1.0E-228 T 25-04-2016 IPR001679 NAD-dependent DNA ligase GO:0003911|GO:0006260|GO:0006281 RJP_RS05680 9ed272f0c9dc3d5ad77b399f14083288 689 Gene3D G3DSA:2.40.50.140 326 395 1.7E-32 T 25-04-2016 IPR012340 Nucleic acid-binding, OB-fold RJP_RS05680 9ed272f0c9dc3d5ad77b399f14083288 689 ProSitePatterns PS01055 NAD-dependent DNA ligase signature 1. 123 152 - T 25-04-2016 IPR018239 NAD-dependent DNA ligase, active site RJP_RS05680 9ed272f0c9dc3d5ad77b399f14083288 689 Gene3D G3DSA:3.30.470.30 127 257 9.1E-47 T 25-04-2016 RJP_RS05680 9ed272f0c9dc3d5ad77b399f14083288 689 SUPERFAMILY SSF52113 613 687 1.8E-15 T 25-04-2016 IPR001357 BRCT domain RJP_RS05680 9ed272f0c9dc3d5ad77b399f14083288 689 Gene3D G3DSA:1.10.287.610 5 75 1.3E-22 T 25-04-2016 RJP_RS05680 9ed272f0c9dc3d5ad77b399f14083288 689 PANTHER PTHR23389:SF9 9 544 1.9E-171 T 25-04-2016 RJP_RS04975 92ad736da9f9703f7265beaee6b73e61 479 Gene3D G3DSA:3.90.190.20 328 465 2.6E-49 T 25-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 RJP_RS04975 92ad736da9f9703f7265beaee6b73e61 479 SUPERFAMILY SSF63418 7 87 1.31E-18 T 25-04-2016 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 UniPathway: UPA00219 RJP_RS04975 92ad736da9f9703f7265beaee6b73e61 479 Pfam PF08245 Mur ligase middle domain 96 300 9.1E-46 T 25-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 RJP_RS04975 92ad736da9f9703f7265beaee6b73e61 479 Hamap MF_00208 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [murE]. 3 472 30.857 T 25-04-2016 IPR005761 UDP-N-acetylmuramoylalanyl-D-glutamate-2,6-diaminopimelate ligase GO:0005524|GO:0005737|GO:0008360|GO:0016881|GO:0051301 UniPathway: UPA00219 RJP_RS04975 92ad736da9f9703f7265beaee6b73e61 479 TIGRFAM TIGR01085 murE: UDP-N-acetylmuramyl-tripeptide synthetase 12 472 3.2E-158 T 25-04-2016 IPR005761 UDP-N-acetylmuramoylalanyl-D-glutamate-2,6-diaminopimelate ligase GO:0005524|GO:0005737|GO:0008360|GO:0016881|GO:0051301 UniPathway: UPA00219 RJP_RS04975 92ad736da9f9703f7265beaee6b73e61 479 Pfam PF02875 Mur ligase family, glutamate ligase domain 322 405 9.1E-20 T 25-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 RJP_RS04975 92ad736da9f9703f7265beaee6b73e61 479 PANTHER PTHR23135 1 473 1.9E-136 T 25-04-2016 RJP_RS04975 92ad736da9f9703f7265beaee6b73e61 479 SUPERFAMILY SSF53244 322 473 4.06E-44 T 25-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 RJP_RS04975 92ad736da9f9703f7265beaee6b73e61 479 Pfam PF01225 Mur ligase family, catalytic domain 14 83 4.4E-11 T 25-04-2016 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 UniPathway: UPA00219 RJP_RS04975 92ad736da9f9703f7265beaee6b73e61 479 Gene3D G3DSA:3.40.1390.10 9 86 6.1E-17 T 25-04-2016 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 UniPathway: UPA00219 RJP_RS04975 92ad736da9f9703f7265beaee6b73e61 479 Gene3D G3DSA:3.40.1190.10 87 327 2.5E-72 T 25-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 RJP_RS04975 92ad736da9f9703f7265beaee6b73e61 479 SUPERFAMILY SSF53623 87 318 3.4E-58 T 25-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 RJP_RS04975 92ad736da9f9703f7265beaee6b73e61 479 PANTHER PTHR23135:SF4 1 473 1.9E-136 T 25-04-2016 RJP_RS06100 2ef3292be75e9ef5eb58a13e4d07e5fb 346 SUPERFAMILY SSF53067 150 336 1.02E-47 T 25-04-2016 RJP_RS06100 2ef3292be75e9ef5eb58a13e4d07e5fb 346 PANTHER PTHR19375:SF117 9 329 4.2E-158 T 25-04-2016 RJP_RS06100 2ef3292be75e9ef5eb58a13e4d07e5fb 346 PANTHER PTHR19375 9 329 4.2E-158 T 25-04-2016 RJP_RS06100 2ef3292be75e9ef5eb58a13e4d07e5fb 346 TIGRFAM TIGR00904 mreB: cell shape determining protein, MreB/Mrl family 9 339 3.7E-165 T 25-04-2016 IPR004753 Cell shape determining protein MreB/Mrl GO:0000902 RJP_RS06100 2ef3292be75e9ef5eb58a13e4d07e5fb 346 Gene3D G3DSA:3.30.420.40 13 160 2.1E-39 T 25-04-2016 RJP_RS06100 2ef3292be75e9ef5eb58a13e4d07e5fb 346 Pfam PF06723 MreB/Mbl protein 12 339 3.5E-147 T 25-04-2016 IPR004753 Cell shape determining protein MreB/Mrl GO:0000902 RJP_RS06100 2ef3292be75e9ef5eb58a13e4d07e5fb 346 Gene3D G3DSA:3.90.640.10 188 262 1.2E-30 T 25-04-2016 RJP_RS06100 2ef3292be75e9ef5eb58a13e4d07e5fb 346 SUPERFAMILY SSF53067 12 149 6.48E-36 T 25-04-2016 RJP_RS06100 2ef3292be75e9ef5eb58a13e4d07e5fb 346 Gene3D G3DSA:3.30.420.40 266 319 4.9E-34 T 25-04-2016 RJP_RS06100 2ef3292be75e9ef5eb58a13e4d07e5fb 346 Gene3D G3DSA:3.30.420.40 161 187 4.9E-34 T 25-04-2016 RJP_RS06100 2ef3292be75e9ef5eb58a13e4d07e5fb 346 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 188 208 9.3E-58 T 25-04-2016 IPR004753 Cell shape determining protein MreB/Mrl GO:0000902 RJP_RS06100 2ef3292be75e9ef5eb58a13e4d07e5fb 346 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 70 93 9.3E-58 T 25-04-2016 IPR004753 Cell shape determining protein MreB/Mrl GO:0000902 RJP_RS06100 2ef3292be75e9ef5eb58a13e4d07e5fb 346 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 133 152 9.3E-58 T 25-04-2016 IPR004753 Cell shape determining protein MreB/Mrl GO:0000902 RJP_RS06100 2ef3292be75e9ef5eb58a13e4d07e5fb 346 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 50 68 9.3E-58 T 25-04-2016 IPR004753 Cell shape determining protein MreB/Mrl GO:0000902 RJP_RS06100 2ef3292be75e9ef5eb58a13e4d07e5fb 346 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 303 329 9.3E-58 T 25-04-2016 IPR004753 Cell shape determining protein MreB/Mrl GO:0000902 RJP_RS02600 86a8e85aec12021a317c47ddf4523dc8 391 PANTHER PTHR11993:SF10 3 386 2.8E-249 T 25-04-2016 RJP_RS02600 86a8e85aec12021a317c47ddf4523dc8 391 ProSitePatterns PS00535 Respiratory chain NADH dehydrogenase 49 Kd subunit signature. 44 55 - T 25-04-2016 IPR014029 NADH:ubiquinone oxidoreductase, 49kDa subunit, conserved site GO:0016651|GO:0055114 RJP_RS02600 86a8e85aec12021a317c47ddf4523dc8 391 Pfam PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit 121 391 2.6E-126 T 25-04-2016 IPR001135 NADH-quinone oxidoreductase, subunit D GO:0016651|GO:0048038|GO:0051287|GO:0055114 RJP_RS02600 86a8e85aec12021a317c47ddf4523dc8 391 PANTHER PTHR11993 3 386 2.8E-249 T 25-04-2016 RJP_RS02600 86a8e85aec12021a317c47ddf4523dc8 391 TIGRFAM TIGR01962 NuoD: NADH dehydrogenase (quinone), D subunit 7 391 1.2E-194 T 25-04-2016 IPR022885 NAD(P)H-quinone oxidoreductase subunit D/H GO:0016651|GO:0055114 RJP_RS02600 86a8e85aec12021a317c47ddf4523dc8 391 Gene3D G3DSA:1.10.645.10 3 232 9.5E-48 T 25-04-2016 IPR029014 NiFe hydrogenase-like RJP_RS02600 86a8e85aec12021a317c47ddf4523dc8 391 Gene3D G3DSA:1.10.645.10 234 374 4.1E-18 T 25-04-2016 IPR029014 NiFe hydrogenase-like RJP_RS02600 86a8e85aec12021a317c47ddf4523dc8 391 SUPERFAMILY SSF56762 17 391 4.45E-141 T 25-04-2016 IPR029014 NiFe hydrogenase-like RJP_RS02600 86a8e85aec12021a317c47ddf4523dc8 391 Hamap MF_01358 NAD(P)H-quinone oxidoreductase subunit H, chloroplastic [ndhH]. 2 391 49.931 T 25-04-2016 IPR022885 NAD(P)H-quinone oxidoreductase subunit D/H GO:0016651|GO:0055114 RJP_RS04025 8775d9c7179a331c1e62ba2a3983ba95 327 Pfam PF00348 Polyprenyl synthetase 31 274 5.8E-66 T 25-04-2016 IPR000092 Polyprenyl synthetase GO:0008299 RJP_RS04025 8775d9c7179a331c1e62ba2a3983ba95 327 SUPERFAMILY SSF48576 2 327 3.52E-84 T 25-04-2016 IPR008949 Isoprenoid synthase domain RJP_RS04025 8775d9c7179a331c1e62ba2a3983ba95 327 ProSitePatterns PS00444 Polyprenyl synthases signature 2. 205 217 - T 25-04-2016 IPR000092 Polyprenyl synthetase GO:0008299 RJP_RS04025 8775d9c7179a331c1e62ba2a3983ba95 327 PANTHER PTHR12001 11 327 1.7E-99 T 25-04-2016 IPR017446 Polyprenyl synthetase-related RJP_RS04025 8775d9c7179a331c1e62ba2a3983ba95 327 PANTHER PTHR12001:SF47 11 327 1.7E-99 T 25-04-2016 RJP_RS04025 8775d9c7179a331c1e62ba2a3983ba95 327 Gene3D G3DSA:1.10.600.10 6 326 1.3E-88 T 25-04-2016 IPR008949 Isoprenoid synthase domain RJP_RS05165 8c44f356d980e02b319b8de77f2e2380 101 SUPERFAMILY SSF57716 2 101 1.71E-32 T 25-04-2016 RJP_RS05165 8c44f356d980e02b319b8de77f2e2380 101 ProSitePatterns PS00527 Ribosomal protein S14 signature. 63 85 - T 25-04-2016 IPR018271 Ribosomal protein S14, conserved site GO:0003735|GO:0005840|GO:0006412 RJP_RS05165 8c44f356d980e02b319b8de77f2e2380 101 Hamap MF_00537 30S ribosomal protein S14 [rpsN]. 1 101 24.925 T 25-04-2016 IPR023036 Ribosomal protein S14, bacterial/plastid RJP_RS05165 8c44f356d980e02b319b8de77f2e2380 101 Gene3D G3DSA:4.10.830.10 42 101 1.1E-28 T 25-04-2016 RJP_RS05165 8c44f356d980e02b319b8de77f2e2380 101 Pfam PF00253 Ribosomal protein S14p/S29e 48 100 2.6E-24 T 25-04-2016 IPR001209 Ribosomal protein S14 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RJP_RS05165 8c44f356d980e02b319b8de77f2e2380 101 PANTHER PTHR19836 1 101 4.3E-46 T 25-04-2016 IPR001209 Ribosomal protein S14 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RJP_RS05650 6b2fb1112277d7648f58270fe8e10364 155 Gene3D G3DSA:1.20.120.20 36 147 2.4E-6 T 25-04-2016 RJP_RS05650 6b2fb1112277d7648f58270fe8e10364 155 SUPERFAMILY SSF47162 34 147 1.7E-7 T 25-04-2016 RJP_RS00795 80ce1580ff1d73b18102de5a71e111df 966 Pfam PF04610 TrbL/VirB6 plasmid conjugal transfer protein 605 803 3.0E-19 T 25-04-2016 IPR007688 Plasmid conjugal transfer TrbL/VirB6 GO:0030255 RJP_RS04675 a2b5df1c68bf42b0bd7a9910dec053d3 239 Pfam PF03725 3' exoribonuclease family, domain 2 159 222 2.1E-10 T 25-04-2016 IPR015847 Exoribonuclease, phosphorolytic domain 2 Reactome: REACT_21257 RJP_RS04675 a2b5df1c68bf42b0bd7a9910dec053d3 239 Hamap MF_00564 Ribonuclease PH [rph]. 1 237 45.766 T 25-04-2016 IPR002381 Ribonuclease phosphorolytic, bacterial-type GO:0000049|GO:0004549|GO:0008033 RJP_RS04675 a2b5df1c68bf42b0bd7a9910dec053d3 239 SUPERFAMILY SSF54211 1 181 2.38E-44 T 25-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold RJP_RS04675 a2b5df1c68bf42b0bd7a9910dec053d3 239 PANTHER PTHR11953:SF0 1 236 6.1E-73 T 25-04-2016 RJP_RS04675 a2b5df1c68bf42b0bd7a9910dec053d3 239 ProSitePatterns PS01277 Ribonuclease PH signature. 116 129 - T 25-04-2016 IPR018336 Ribonuclease PH, conserved site RJP_RS04675 a2b5df1c68bf42b0bd7a9910dec053d3 239 PANTHER PTHR11953 1 236 6.1E-73 T 25-04-2016 RJP_RS04675 a2b5df1c68bf42b0bd7a9910dec053d3 239 Gene3D G3DSA:3.30.230.70 8 235 3.7E-28 T 25-04-2016 IPR027408 PNPase/RNase PH domain RJP_RS04675 a2b5df1c68bf42b0bd7a9910dec053d3 239 TIGRFAM TIGR01966 RNasePH: ribonuclease PH 2 236 7.9E-115 T 25-04-2016 IPR002381 Ribonuclease phosphorolytic, bacterial-type GO:0000049|GO:0004549|GO:0008033 RJP_RS04675 a2b5df1c68bf42b0bd7a9910dec053d3 239 Pfam PF01138 3' exoribonuclease family, domain 1 10 139 1.5E-21 T 25-04-2016 IPR001247 Exoribonuclease, phosphorolytic domain 1 Reactome: REACT_21257 RJP_RS04675 a2b5df1c68bf42b0bd7a9910dec053d3 239 SUPERFAMILY SSF55666 154 235 3.53E-22 T 25-04-2016 IPR015847 Exoribonuclease, phosphorolytic domain 2 Reactome: REACT_21257 RJP_RS05600 c672338cb6ae6a4935cf0055edb5eb09 552 PANTHER PTHR30009:SF0 1 97 9.2E-88 T 25-04-2016 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 RJP_RS05600 c672338cb6ae6a4935cf0055edb5eb09 552 PANTHER PTHR30009:SF0 117 346 9.2E-88 T 25-04-2016 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 RJP_RS05600 c672338cb6ae6a4935cf0055edb5eb09 552 PANTHER PTHR30009:SF0 382 547 9.2E-88 T 25-04-2016 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 RJP_RS05600 c672338cb6ae6a4935cf0055edb5eb09 552 Pfam PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal 270 547 3.0E-40 T 25-04-2016 IPR032523 Cytochrome c-type biogenesis protein CcmF, C-terminal RJP_RS05600 c672338cb6ae6a4935cf0055edb5eb09 552 PANTHER PTHR30009 1 97 9.2E-88 T 25-04-2016 RJP_RS05600 c672338cb6ae6a4935cf0055edb5eb09 552 PANTHER PTHR30009 117 346 9.2E-88 T 25-04-2016 RJP_RS05600 c672338cb6ae6a4935cf0055edb5eb09 552 PANTHER PTHR30009 382 547 9.2E-88 T 25-04-2016 RJP_RS05600 c672338cb6ae6a4935cf0055edb5eb09 552 Pfam PF01578 Cytochrome C assembly protein 2 207 1.9E-33 T 25-04-2016 IPR002541 Cytochrome c assembly protein GO:0017004|GO:0020037 RJP_RS05600 c672338cb6ae6a4935cf0055edb5eb09 552 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 122 148 1.5E-55 T 25-04-2016 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 RJP_RS05600 c672338cb6ae6a4935cf0055edb5eb09 552 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 186 206 1.5E-55 T 25-04-2016 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 RJP_RS05600 c672338cb6ae6a4935cf0055edb5eb09 552 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 62 84 1.5E-55 T 25-04-2016 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 RJP_RS05600 c672338cb6ae6a4935cf0055edb5eb09 552 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 206 222 1.5E-55 T 25-04-2016 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 RJP_RS05600 c672338cb6ae6a4935cf0055edb5eb09 552 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 35 52 1.5E-55 T 25-04-2016 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 RJP_RS05600 c672338cb6ae6a4935cf0055edb5eb09 552 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 156 176 1.5E-55 T 25-04-2016 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 RJP_RS05600 c672338cb6ae6a4935cf0055edb5eb09 552 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 222 241 1.5E-55 T 25-04-2016 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 RJP_RS01805 ce401573331307d25307b2f222f2e202 411 Pfam PF14450 Cell division protein FtsA 205 359 1.4E-15 T 25-04-2016 RJP_RS01805 ce401573331307d25307b2f222f2e202 411 SUPERFAMILY SSF53067 8 194 1.48E-40 T 25-04-2016 RJP_RS01805 ce401573331307d25307b2f222f2e202 411 Gene3D G3DSA:3.30.420.40 151 205 1.2E-8 T 25-04-2016 RJP_RS01805 ce401573331307d25307b2f222f2e202 411 Gene3D G3DSA:3.30.420.40 4 81 1.2E-8 T 25-04-2016 RJP_RS01805 ce401573331307d25307b2f222f2e202 411 PANTHER PTHR32432:SF4 1 378 3.0E-82 T 25-04-2016 RJP_RS01805 ce401573331307d25307b2f222f2e202 411 PANTHER PTHR32432 1 378 3.0E-82 T 25-04-2016 RJP_RS01805 ce401573331307d25307b2f222f2e202 411 Hamap MF_02033 Cell division protein FtsA [ftsA]. 4 411 23.391 T 25-04-2016 IPR020823 Cell division protein FtsA GO:0007049 RJP_RS01805 ce401573331307d25307b2f222f2e202 411 Gene3D G3DSA:3.30.420.40 299 353 7.1E-21 T 25-04-2016 RJP_RS01805 ce401573331307d25307b2f222f2e202 411 Gene3D G3DSA:3.30.420.40 206 231 7.1E-21 T 25-04-2016 RJP_RS01805 ce401573331307d25307b2f222f2e202 411 TIGRFAM TIGR01174 ftsA: cell division protein FtsA 8 378 1.5E-126 T 25-04-2016 IPR020823 Cell division protein FtsA GO:0007049 RJP_RS01805 ce401573331307d25307b2f222f2e202 411 Gene3D G3DSA:3.90.640.10 232 298 1.1E-13 T 25-04-2016 RJP_RS01805 ce401573331307d25307b2f222f2e202 411 SMART SM00842 8 193 1.2E-62 T 25-04-2016 IPR003494 SHS2 domain inserted in FtsA GO:0005515|GO:0007049 RJP_RS01805 ce401573331307d25307b2f222f2e202 411 PIRSF PIRSF003101 1 411 5.3E-103 T 25-04-2016 IPR020823 Cell division protein FtsA GO:0007049 RJP_RS01805 ce401573331307d25307b2f222f2e202 411 Gene3D G3DSA:3.30.1490.110 85 150 1.1E-20 T 25-04-2016 RJP_RS01805 ce401573331307d25307b2f222f2e202 411 Pfam PF02491 SHS2 domain inserted in FTSA 83 158 5.4E-18 T 25-04-2016 IPR003494 SHS2 domain inserted in FtsA GO:0005515|GO:0007049 RJP_RS01805 ce401573331307d25307b2f222f2e202 411 SUPERFAMILY SSF53067 195 377 8.1E-31 T 25-04-2016 RJP_RS06510 e80a2d2aaa9024f9561edf699e1bdad8 102 PANTHER PTHR30471:SF3 12 86 9.1E-14 T 25-04-2016 RJP_RS06510 e80a2d2aaa9024f9561edf699e1bdad8 102 PANTHER PTHR30471 12 86 9.1E-14 T 25-04-2016 RJP_RS00355 b380f4254169499a3ba106340512b98d 352 SUPERFAMILY SSF53067 3 124 5.57E-28 T 25-04-2016 RJP_RS00355 b380f4254169499a3ba106340512b98d 352 Hamap MF_01445 tRNA N6-adenosine threonylcarbamoyltransferase [tsaD]. 2 339 61.375 T 25-04-2016 IPR022450 tRNA N6-adenosine threonylcarbamoyltransferase, TsaD GO:0002949|GO:0004222 KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 RJP_RS00355 b380f4254169499a3ba106340512b98d 352 Pfam PF00814 Glycoprotease family 24 315 1.4E-94 T 25-04-2016 IPR000905 Gcp-like domain KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 RJP_RS00355 b380f4254169499a3ba106340512b98d 352 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 77 97 2.7E-44 T 25-04-2016 IPR017861 Kae1/TsaD family KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 RJP_RS00355 b380f4254169499a3ba106340512b98d 352 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 5 18 2.7E-44 T 25-04-2016 IPR017861 Kae1/TsaD family KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 RJP_RS00355 b380f4254169499a3ba106340512b98d 352 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 154 175 2.7E-44 T 25-04-2016 IPR017861 Kae1/TsaD family KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 RJP_RS00355 b380f4254169499a3ba106340512b98d 352 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 131 143 2.7E-44 T 25-04-2016 IPR017861 Kae1/TsaD family KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 RJP_RS00355 b380f4254169499a3ba106340512b98d 352 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 98 117 2.7E-44 T 25-04-2016 IPR017861 Kae1/TsaD family KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 RJP_RS00355 b380f4254169499a3ba106340512b98d 352 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 271 280 2.7E-44 T 25-04-2016 IPR017861 Kae1/TsaD family KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 RJP_RS00355 b380f4254169499a3ba106340512b98d 352 SUPERFAMILY SSF53067 102 317 8.25E-46 T 25-04-2016 RJP_RS00355 b380f4254169499a3ba106340512b98d 352 PANTHER PTHR11735:SF6 1 352 2.7E-145 T 25-04-2016 RJP_RS00355 b380f4254169499a3ba106340512b98d 352 Gene3D G3DSA:3.30.420.40 3 159 3.0E-40 T 25-04-2016 RJP_RS00355 b380f4254169499a3ba106340512b98d 352 PANTHER PTHR11735 1 352 2.7E-145 T 25-04-2016 RJP_RS00355 b380f4254169499a3ba106340512b98d 352 TIGRFAM TIGR03723 T6A_TsaD_YgjD: tRNA threonylcarbamoyl adenosine modification protein TsaD 4 321 1.3E-123 T 25-04-2016 IPR022450 tRNA N6-adenosine threonylcarbamoyltransferase, TsaD GO:0002949|GO:0004222 KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 RJP_RS00355 b380f4254169499a3ba106340512b98d 352 TIGRFAM TIGR00329 gcp_kae1: metallohydrolase, glycoprotease/Kae1 family 5 314 5.6E-102 T 25-04-2016 IPR017861 Kae1/TsaD family KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 RJP_RS00355 b380f4254169499a3ba106340512b98d 352 ProSitePatterns PS01016 Glycoprotease family signature. 97 117 - T 25-04-2016 IPR017860 Peptidase M22, conserved site KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 RJP_RS04060 9cf22de4e797dc3e8da8afd89f7522fe 131 Pfam PF01592 NifU-like N terminal domain 2 126 3.5E-57 T 25-04-2016 IPR002871 NIF system FeS cluster assembly, NifU, N-terminal GO:0005506|GO:0016226|GO:0051536 RJP_RS04060 9cf22de4e797dc3e8da8afd89f7522fe 131 SUPERFAMILY SSF82649 1 125 3.4E-49 T 25-04-2016 RJP_RS04060 9cf22de4e797dc3e8da8afd89f7522fe 131 Gene3D G3DSA:3.90.1010.10 2 128 6.5E-57 T 25-04-2016 RJP_RS04060 9cf22de4e797dc3e8da8afd89f7522fe 131 TIGRFAM TIGR01999 iscU: FeS cluster assembly scaffold IscU 3 126 2.1E-71 T 25-04-2016 IPR011339 ISC system FeS cluster assembly, IscU scaffold GO:0005506|GO:0016226|GO:0051536 RJP_RS04060 9cf22de4e797dc3e8da8afd89f7522fe 131 PANTHER PTHR10093 1 130 2.0E-91 T 25-04-2016 RJP_RS00485 403f736a9142fa010c6a75615e0d8412 431 Gene3D G3DSA:1.20.1250.20 236 426 6.8E-42 T 25-04-2016 RJP_RS00485 403f736a9142fa010c6a75615e0d8412 431 PIRSF PIRSF002808 1 430 1.4E-148 T 25-04-2016 IPR000849 Sugar phosphate transporter GO:0005215|GO:0006810|GO:0016021 RJP_RS00485 403f736a9142fa010c6a75615e0d8412 431 Pfam PF07690 Major Facilitator Superfamily 30 351 6.9E-48 T 25-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 RJP_RS00485 403f736a9142fa010c6a75615e0d8412 431 PANTHER PTHR11662 16 429 9.7E-123 T 25-04-2016 RJP_RS00485 403f736a9142fa010c6a75615e0d8412 431 SUPERFAMILY SSF103473 2 428 4.32E-82 T 25-04-2016 IPR020846 Major facilitator superfamily domain RJP_RS00485 403f736a9142fa010c6a75615e0d8412 431 PANTHER PTHR11662:SF141 16 429 9.7E-123 T 25-04-2016 RJP_RS00485 403f736a9142fa010c6a75615e0d8412 431 Gene3D G3DSA:1.20.1250.20 21 216 8.0E-47 T 25-04-2016 RJP_RS01280 9a2d01633c484e10b0049441479fe77e 627 SUPERFAMILY SSF53067 186 376 4.26E-68 T 25-04-2016 RJP_RS01280 9a2d01633c484e10b0049441479fe77e 627 Gene3D G3DSA:3.30.420.40 118 190 8.2E-67 T 25-04-2016 RJP_RS01280 9a2d01633c484e10b0049441479fe77e 627 Gene3D G3DSA:3.30.420.40 4 52 8.2E-67 T 25-04-2016 RJP_RS01280 9a2d01633c484e10b0049441479fe77e 627 Hamap MF_00332 Chaperone protein DnaK [dnaK]. 1 624 37.221 T 25-04-2016 IPR012725 Chaperone DnaK GO:0005524|GO:0006457|GO:0051082 RJP_RS01280 9a2d01633c484e10b0049441479fe77e 627 TIGRFAM TIGR02350 prok_dnaK: chaperone protein DnaK 3 598 3.8E-295 T 25-04-2016 IPR012725 Chaperone DnaK GO:0005524|GO:0006457|GO:0051082 RJP_RS01280 9a2d01633c484e10b0049441479fe77e 627 ProSitePatterns PS00329 Heat shock hsp70 proteins family signature 2. 190 203 - T 25-04-2016 IPR018181 Heat shock protein 70, conserved site RJP_RS01280 9a2d01633c484e10b0049441479fe77e 627 Gene3D G3DSA:1.20.1270.10 526 597 8.2E-30 T 25-04-2016 IPR029048 Heat shock protein 70kD, C-terminal domain RJP_RS01280 9a2d01633c484e10b0049441479fe77e 627 ProSitePatterns PS00297 Heat shock hsp70 proteins family signature 1. 7 14 - T 25-04-2016 IPR018181 Heat shock protein 70, conserved site RJP_RS01280 9a2d01633c484e10b0049441479fe77e 627 Pfam PF00012 Hsp70 protein 4 598 4.6E-274 T 25-04-2016 IPR013126 Heat shock protein 70 family RJP_RS01280 9a2d01633c484e10b0049441479fe77e 627 Gene3D G3DSA:3.90.640.10 224 308 3.0E-29 T 25-04-2016 RJP_RS01280 9a2d01633c484e10b0049441479fe77e 627 SUPERFAMILY SSF100920 379 534 1.44E-62 T 25-04-2016 IPR029047 Heat shock protein 70kD, peptide-binding domain RJP_RS01280 9a2d01633c484e10b0049441479fe77e 627 Gene3D G3DSA:3.30.420.40 313 355 2.2E-37 T 25-04-2016 RJP_RS01280 9a2d01633c484e10b0049441479fe77e 627 Gene3D G3DSA:3.30.420.40 191 223 2.2E-37 T 25-04-2016 RJP_RS01280 9a2d01633c484e10b0049441479fe77e 627 PANTHER PTHR19375 2 627 0.0 T 25-04-2016 RJP_RS01280 9a2d01633c484e10b0049441479fe77e 627 ProSitePatterns PS01036 Heat shock hsp70 proteins family signature 3. 331 345 - T 25-04-2016 IPR018181 Heat shock protein 70, conserved site RJP_RS01280 9a2d01633c484e10b0049441479fe77e 627 Gene3D G3DSA:2.60.34.10 384 525 6.7E-74 T 25-04-2016 IPR029047 Heat shock protein 70kD, peptide-binding domain RJP_RS01280 9a2d01633c484e10b0049441479fe77e 627 PRINTS PR00301 70kDa heat shock protein signature 196 206 2.3E-79 T 25-04-2016 IPR013126 Heat shock protein 70 family RJP_RS01280 9a2d01633c484e10b0049441479fe77e 627 PRINTS PR00301 70kDa heat shock protein signature 328 344 2.3E-79 T 25-04-2016 IPR013126 Heat shock protein 70 family RJP_RS01280 9a2d01633c484e10b0049441479fe77e 627 PRINTS PR00301 70kDa heat shock protein signature 463 479 2.3E-79 T 25-04-2016 IPR013126 Heat shock protein 70 family RJP_RS01280 9a2d01633c484e10b0049441479fe77e 627 PRINTS PR00301 70kDa heat shock protein signature 137 157 2.3E-79 T 25-04-2016 IPR013126 Heat shock protein 70 family RJP_RS01280 9a2d01633c484e10b0049441479fe77e 627 PRINTS PR00301 70kDa heat shock protein signature 3 16 2.3E-79 T 25-04-2016 IPR013126 Heat shock protein 70 family RJP_RS01280 9a2d01633c484e10b0049441479fe77e 627 PRINTS PR00301 70kDa heat shock protein signature 359 379 2.3E-79 T 25-04-2016 IPR013126 Heat shock protein 70 family RJP_RS01280 9a2d01633c484e10b0049441479fe77e 627 PRINTS PR00301 70kDa heat shock protein signature 53 61 2.3E-79 T 25-04-2016 IPR013126 Heat shock protein 70 family RJP_RS01280 9a2d01633c484e10b0049441479fe77e 627 PRINTS PR00301 70kDa heat shock protein signature 382 401 2.3E-79 T 25-04-2016 IPR013126 Heat shock protein 70 family RJP_RS01280 9a2d01633c484e10b0049441479fe77e 627 PRINTS PR00301 70kDa heat shock protein signature 31 43 2.3E-79 T 25-04-2016 IPR013126 Heat shock protein 70 family RJP_RS01280 9a2d01633c484e10b0049441479fe77e 627 PANTHER PTHR19375:SF173 2 627 0.0 T 25-04-2016 RJP_RS01280 9a2d01633c484e10b0049441479fe77e 627 SUPERFAMILY SSF100934 501 598 2.94E-20 T 25-04-2016 IPR029048 Heat shock protein 70kD, C-terminal domain RJP_RS01280 9a2d01633c484e10b0049441479fe77e 627 SUPERFAMILY SSF53067 1 182 2.59E-66 T 25-04-2016 RJP_RS01280 9a2d01633c484e10b0049441479fe77e 627 Gene3D G3DSA:3.30.30.30 53 105 1.0E-24 T 25-04-2016 RJP_RS03100 bf05627249670deea911dd285e62e4df 835 Gene3D G3DSA:3.40.50.620 601 630 5.3E-146 T 25-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold RJP_RS03100 bf05627249670deea911dd285e62e4df 835 Gene3D G3DSA:3.40.50.620 2 216 5.3E-146 T 25-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold RJP_RS03100 bf05627249670deea911dd285e62e4df 835 Gene3D G3DSA:3.40.50.620 416 565 5.3E-146 T 25-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold RJP_RS03100 bf05627249670deea911dd285e62e4df 835 PRINTS PR00985 Leucyl-tRNA synthetase signature 121 138 1.6E-47 T 25-04-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4 RJP_RS03100 bf05627249670deea911dd285e62e4df 835 PRINTS PR00985 Leucyl-tRNA synthetase signature 549 559 1.6E-47 T 25-04-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4 RJP_RS03100 bf05627249670deea911dd285e62e4df 835 PRINTS PR00985 Leucyl-tRNA synthetase signature 179 192 1.6E-47 T 25-04-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4 RJP_RS03100 bf05627249670deea911dd285e62e4df 835 PRINTS PR00985 Leucyl-tRNA synthetase signature 209 228 1.6E-47 T 25-04-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4 RJP_RS03100 bf05627249670deea911dd285e62e4df 835 PRINTS PR00985 Leucyl-tRNA synthetase signature 516 538 1.6E-47 T 25-04-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4 RJP_RS03100 bf05627249670deea911dd285e62e4df 835 PRINTS PR00985 Leucyl-tRNA synthetase signature 147 163 1.6E-47 T 25-04-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4 RJP_RS03100 bf05627249670deea911dd285e62e4df 835 PRINTS PR00985 Leucyl-tRNA synthetase signature 478 496 1.6E-47 T 25-04-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4 RJP_RS03100 bf05627249670deea911dd285e62e4df 835 PANTHER PTHR11946 596 835 0.0 T 25-04-2016 RJP_RS03100 bf05627249670deea911dd285e62e4df 835 PANTHER PTHR11946 1 200 0.0 T 25-04-2016 RJP_RS03100 bf05627249670deea911dd285e62e4df 835 PANTHER PTHR11946 235 563 0.0 T 25-04-2016 RJP_RS03100 bf05627249670deea911dd285e62e4df 835 Hamap MF_00049_B Leucine--tRNA ligase [leuS]. 1 835 22.223 T 25-04-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4 RJP_RS03100 bf05627249670deea911dd285e62e4df 835 Gene3D G3DSA:1.10.730.10 631 771 1.5E-37 T 25-04-2016 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 RJP_RS03100 bf05627249670deea911dd285e62e4df 835 Pfam PF13603 Leucyl-tRNA synthetase, Domain 2 216 393 6.0E-59 T 25-04-2016 IPR025709 Leucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 KEGG: 00970+6.1.1.4 RJP_RS03100 bf05627249670deea911dd285e62e4df 835 SUPERFAMILY SSF47323 645 835 6.92E-31 T 25-04-2016 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 RJP_RS03100 bf05627249670deea911dd285e62e4df 835 SUPERFAMILY SSF52374 407 651 4.28E-148 T 25-04-2016 RJP_RS03100 bf05627249670deea911dd285e62e4df 835 SUPERFAMILY SSF52374 3 220 4.28E-148 T 25-04-2016 RJP_RS03100 bf05627249670deea911dd285e62e4df 835 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 36 47 - T 25-04-2016 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 RJP_RS03100 bf05627249670deea911dd285e62e4df 835 Gene3D G3DSA:3.90.740.10 217 415 4.5E-47 T 25-04-2016 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 Reactome: REACT_71 RJP_RS03100 bf05627249670deea911dd285e62e4df 835 SUPERFAMILY SSF50677 220 406 1.26E-44 T 25-04-2016 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 Reactome: REACT_71 RJP_RS03100 bf05627249670deea911dd285e62e4df 835 TIGRFAM TIGR00396 leuS_bact: leucine--tRNA ligase 2 835 0.0 T 25-04-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4 RJP_RS03100 bf05627249670deea911dd285e62e4df 835 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 8 165 7.4E-25 T 25-04-2016 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 RJP_RS03100 bf05627249670deea911dd285e62e4df 835 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 601 642 2.1E-7 T 25-04-2016 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 RJP_RS03100 bf05627249670deea911dd285e62e4df 835 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 408 564 2.4E-9 T 25-04-2016 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 RJP_RS03100 bf05627249670deea911dd285e62e4df 835 Pfam PF08264 Anticodon-binding domain of tRNA 679 797 2.2E-16 T 25-04-2016 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding GO:0000166|GO:0006418 Reactome: REACT_71 RJP_RS03100 bf05627249670deea911dd285e62e4df 835 PANTHER PTHR11946:SF84 596 835 0.0 T 25-04-2016 RJP_RS03100 bf05627249670deea911dd285e62e4df 835 PANTHER PTHR11946:SF84 1 200 0.0 T 25-04-2016 RJP_RS03100 bf05627249670deea911dd285e62e4df 835 PANTHER PTHR11946:SF84 235 563 0.0 T 25-04-2016 RJP_RS05655 79807d79c4f5c69e32384e36f32d8b80 156 Pfam PF00578 AhpC/TSA family 6 133 3.4E-36 T 25-04-2016 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15 RJP_RS05655 79807d79c4f5c69e32384e36f32d8b80 156 SUPERFAMILY SSF52833 3 154 2.76E-50 T 25-04-2016 IPR012336 Thioredoxin-like fold RJP_RS05655 79807d79c4f5c69e32384e36f32d8b80 156 PANTHER PTHR10681 3 151 3.5E-43 T 25-04-2016 RJP_RS05655 79807d79c4f5c69e32384e36f32d8b80 156 Gene3D G3DSA:3.40.30.10 2 152 4.0E-47 T 25-04-2016 IPR012336 Thioredoxin-like fold RJP_RS05655 79807d79c4f5c69e32384e36f32d8b80 156 PIRSF PIRSF000239 1 156 4.9E-28 T 25-04-2016 IPR024706 Peroxiredoxin, AhpC-type KEGG: 00480+1.11.1.15 RJP_RS01930 9e49e2b0f1f97e03029cc37f55c28fdd 251 PANTHER PTHR10266:SF3 6 251 4.4E-132 T 25-04-2016 RJP_RS01930 9e49e2b0f1f97e03029cc37f55c28fdd 251 Pfam PF02167 Cytochrome C1 family 32 249 2.3E-99 T 25-04-2016 IPR002326 Cytochrome c1 GO:0009055|GO:0020037 RJP_RS01930 9e49e2b0f1f97e03029cc37f55c28fdd 251 Gene3D G3DSA:1.10.760.10 23 216 2.2E-82 T 25-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 RJP_RS01930 9e49e2b0f1f97e03029cc37f55c28fdd 251 SUPERFAMILY SSF46626 24 215 7.9E-71 T 25-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 RJP_RS01930 9e49e2b0f1f97e03029cc37f55c28fdd 251 Gene3D G3DSA:1.20.5.100 217 251 1.1E-15 T 25-04-2016 RJP_RS01930 9e49e2b0f1f97e03029cc37f55c28fdd 251 PRINTS PR00603 Cytochrome C1 signature 50 69 5.8E-64 T 25-04-2016 IPR002326 Cytochrome c1 GO:0009055|GO:0020037 RJP_RS01930 9e49e2b0f1f97e03029cc37f55c28fdd 251 PRINTS PR00603 Cytochrome C1 signature 30 49 5.8E-64 T 25-04-2016 IPR002326 Cytochrome c1 GO:0009055|GO:0020037 RJP_RS01930 9e49e2b0f1f97e03029cc37f55c28fdd 251 PRINTS PR00603 Cytochrome C1 signature 128 152 5.8E-64 T 25-04-2016 IPR002326 Cytochrome c1 GO:0009055|GO:0020037 RJP_RS01930 9e49e2b0f1f97e03029cc37f55c28fdd 251 PRINTS PR00603 Cytochrome C1 signature 197 216 5.8E-64 T 25-04-2016 IPR002326 Cytochrome c1 GO:0009055|GO:0020037 RJP_RS01930 9e49e2b0f1f97e03029cc37f55c28fdd 251 PRINTS PR00603 Cytochrome C1 signature 216 231 5.8E-64 T 25-04-2016 IPR002326 Cytochrome c1 GO:0009055|GO:0020037 RJP_RS01930 9e49e2b0f1f97e03029cc37f55c28fdd 251 PRINTS PR00603 Cytochrome C1 signature 166 177 5.8E-64 T 25-04-2016 IPR002326 Cytochrome c1 GO:0009055|GO:0020037 RJP_RS01930 9e49e2b0f1f97e03029cc37f55c28fdd 251 PRINTS PR00603 Cytochrome C1 signature 95 115 5.8E-64 T 25-04-2016 IPR002326 Cytochrome c1 GO:0009055|GO:0020037 RJP_RS01930 9e49e2b0f1f97e03029cc37f55c28fdd 251 PRINTS PR00603 Cytochrome C1 signature 177 196 5.8E-64 T 25-04-2016 IPR002326 Cytochrome c1 GO:0009055|GO:0020037 RJP_RS01930 9e49e2b0f1f97e03029cc37f55c28fdd 251 SUPERFAMILY SSF81496 216 251 1.83E-5 T 25-04-2016 IPR021157 Cytochrome c1, transmembrane anchor, C-terminal RJP_RS01930 9e49e2b0f1f97e03029cc37f55c28fdd 251 PANTHER PTHR10266 6 251 4.4E-132 T 25-04-2016 IPR002326 Cytochrome c1 GO:0009055|GO:0020037 RJP_RS02315 9213a214c3b94d24caef748de0d5192b 338 Hamap MF_02121 Aspartate-semialdehyde dehydrogenase [asd]. 4 334 34.012 T 25-04-2016 IPR012080 Aspartate-semialdehyde dehydrogenase GO:0004073|GO:0009086|GO:0009088|GO:0009089|GO:0009097|GO:0050661|GO:0055114 KEGG: 00260+1.2.1.11|KEGG: 00261+1.2.1.11|KEGG: 00270+1.2.1.11|KEGG: 00300+1.2.1.11|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|UniPathway: UPA00034|UniPathway: UPA00050|UniPathway: UPA00051 RJP_RS02315 9213a214c3b94d24caef748de0d5192b 338 SMART SM00859 6 121 8.0E-34 T 25-04-2016 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 RJP_RS02315 9213a214c3b94d24caef748de0d5192b 338 Gene3D G3DSA:3.40.50.720 1 144 5.0E-55 T 25-04-2016 IPR016040 NAD(P)-binding domain RJP_RS02315 9213a214c3b94d24caef748de0d5192b 338 PIRSF PIRSF000148 4 338 7.4E-119 T 25-04-2016 IPR012080 Aspartate-semialdehyde dehydrogenase GO:0004073|GO:0009086|GO:0009088|GO:0009089|GO:0009097|GO:0050661|GO:0055114 KEGG: 00260+1.2.1.11|KEGG: 00261+1.2.1.11|KEGG: 00270+1.2.1.11|KEGG: 00300+1.2.1.11|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|UniPathway: UPA00034|UniPathway: UPA00050|UniPathway: UPA00051 RJP_RS02315 9213a214c3b94d24caef748de0d5192b 338 TIGRFAM TIGR01296 asd_B: aspartate-semialdehyde dehydrogenase 6 336 5.4E-156 T 25-04-2016 IPR005986 Aspartate-semialdehyde dehydrogenase, beta-type GO:0004073|GO:0009086|GO:0009088|GO:0009089|GO:0009097|GO:0050661|GO:0055114 KEGG: 00260+1.2.1.11|KEGG: 00261+1.2.1.11|KEGG: 00270+1.2.1.11|KEGG: 00300+1.2.1.11|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|UniPathway: UPA00034|UniPathway: UPA00050|UniPathway: UPA00051 RJP_RS02315 9213a214c3b94d24caef748de0d5192b 338 Pfam PF02774 Semialdehyde dehydrogenase, dimerisation domain 141 320 3.6E-44 T 25-04-2016 IPR012280 Semialdehyde dehydrogenase, dimerisation domain GO:0003942|GO:0005737|GO:0008652|GO:0016620|GO:0046983|GO:0055114 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 RJP_RS02315 9213a214c3b94d24caef748de0d5192b 338 SUPERFAMILY SSF55347 131 321 5.69E-64 T 25-04-2016 RJP_RS02315 9213a214c3b94d24caef748de0d5192b 338 Pfam PF01118 Semialdehyde dehydrogenase, NAD binding domain 6 120 2.1E-30 T 25-04-2016 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 RJP_RS02315 9213a214c3b94d24caef748de0d5192b 338 SUPERFAMILY SSF51735 5 159 9.42E-47 T 25-04-2016 IPR016040 NAD(P)-binding domain RJP_RS02315 9213a214c3b94d24caef748de0d5192b 338 Gene3D G3DSA:3.30.360.10 145 316 1.7E-67 T 25-04-2016 RJP_RS02315 9213a214c3b94d24caef748de0d5192b 338 PANTHER PTHR10174:SF2 67 338 8.1E-61 T 25-04-2016 RJP_RS02315 9213a214c3b94d24caef748de0d5192b 338 PANTHER PTHR10174 67 338 8.1E-61 T 25-04-2016 RJP_RS06600 ef0c1c773e1f6dc7a542198090dea4ae 152 TIGRFAM TIGR00621 ssb: single-stranded DNA-binding protein 3 136 2.9E-40 T 25-04-2016 IPR011344 Single-stranded DNA-binding protein GO:0003697|GO:0006260 RJP_RS06600 ef0c1c773e1f6dc7a542198090dea4ae 152 PIRSF PIRSF002070 1 151 2.8E-34 T 25-04-2016 IPR011344 Single-stranded DNA-binding protein GO:0003697|GO:0006260 RJP_RS06600 ef0c1c773e1f6dc7a542198090dea4ae 152 Gene3D G3DSA:2.40.50.140 2 152 9.5E-48 T 25-04-2016 IPR012340 Nucleic acid-binding, OB-fold RJP_RS06600 ef0c1c773e1f6dc7a542198090dea4ae 152 PANTHER PTHR10302 1 130 1.8E-41 T 25-04-2016 IPR011344 Single-stranded DNA-binding protein GO:0003697|GO:0006260 RJP_RS06600 ef0c1c773e1f6dc7a542198090dea4ae 152 SUPERFAMILY SSF50249 4 152 2.33E-44 T 25-04-2016 IPR012340 Nucleic acid-binding, OB-fold RJP_RS06600 ef0c1c773e1f6dc7a542198090dea4ae 152 Hamap MF_00984 Single-stranded DNA-binding protein. 5 118 33.89 T 25-04-2016 IPR011344 Single-stranded DNA-binding protein GO:0003697|GO:0006260 RJP_RS06600 ef0c1c773e1f6dc7a542198090dea4ae 152 Pfam PF00436 Single-strand binding protein family 5 108 2.1E-37 T 25-04-2016 IPR000424 Primosome PriB/single-strand DNA-binding GO:0003697 RJP_RS05220 27b2e50eaf7e0c894a797bb14d9eabbd 98 PANTHER PTHR11620 7 97 2.3E-22 T 25-04-2016 RJP_RS05220 27b2e50eaf7e0c894a797bb14d9eabbd 98 Pfam PF00276 Ribosomal protein L23 8 93 1.3E-28 T 25-04-2016 IPR013025 Ribosomal protein L25/L23 GO:0003735|GO:0005840|GO:0006412 RJP_RS05220 27b2e50eaf7e0c894a797bb14d9eabbd 98 SUPERFAMILY SSF54189 5 95 6.83E-30 T 25-04-2016 IPR012678 Ribosomal protein L23/L15e core domain GO:0003735|GO:0005622|GO:0005840|GO:0006412 RJP_RS05220 27b2e50eaf7e0c894a797bb14d9eabbd 98 Hamap MF_01369_B 50S ribosomal protein L23 [rplW]. 7 96 21.526 T 25-04-2016 IPR013025 Ribosomal protein L25/L23 GO:0003735|GO:0005840|GO:0006412 RJP_RS05220 27b2e50eaf7e0c894a797bb14d9eabbd 98 Gene3D G3DSA:3.30.70.330 5 97 1.8E-32 T 25-04-2016 IPR012677 Nucleotide-binding alpha-beta plait domain GO:0000166 RJP_RS00880 4a51e3f5633f47cccd0d85c9756ecb7e 129 Pfam PF08780 Nucleotidyltransferase substrate binding protein like 7 123 2.7E-33 T 25-04-2016 IPR010235 Nucleotidyltransferase substrate binding protein, HI0074 RJP_RS00880 4a51e3f5633f47cccd0d85c9756ecb7e 129 TIGRFAM TIGR01987 HI0074: nucleotidyltransferase substrate binding protein, HI0074 family 7 126 9.3E-53 T 25-04-2016 IPR010235 Nucleotidyltransferase substrate binding protein, HI0074 RJP_RS00880 4a51e3f5633f47cccd0d85c9756ecb7e 129 Gene3D G3DSA:1.20.120.330 3 125 1.6E-44 T 25-04-2016 RJP_RS00880 4a51e3f5633f47cccd0d85c9756ecb7e 129 SUPERFAMILY SSF81593 2 123 3.22E-35 T 25-04-2016 RJP_RS04365 dccdc9078005c459efaab16b2daff1af 427 TIGRFAM TIGR01988 Ubi-OHases: ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family 57 425 1.5E-108 T 25-04-2016 IPR010971 Ubiquinone biosynthesis hydroxylase UbiH/COQ6 GO:0006744|GO:0016709|GO:0050660|GO:0055114 UniPathway: UPA00232 RJP_RS04365 dccdc9078005c459efaab16b2daff1af 427 Gene3D G3DSA:3.50.50.60 58 227 1.4E-32 T 25-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RJP_RS04365 dccdc9078005c459efaab16b2daff1af 427 Gene3D G3DSA:3.50.50.60 313 391 1.4E-32 T 25-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RJP_RS04365 dccdc9078005c459efaab16b2daff1af 427 Pfam PF01494 FAD binding domain 57 356 3.5E-20 T 25-04-2016 IPR002938 FAD-binding domain GO:0071949 RJP_RS04365 dccdc9078005c459efaab16b2daff1af 427 TIGRFAM TIGR01045 RPE1: rickettsial palindromic element RPE1 domain 8 55 2.4E-26 T 25-04-2016 IPR005728 Rickettsial palindromic element RJP_RS04365 dccdc9078005c459efaab16b2daff1af 427 PANTHER PTHR13789 58 427 1.2E-98 T 25-04-2016 RJP_RS04365 dccdc9078005c459efaab16b2daff1af 427 SUPERFAMILY SSF51905 57 222 4.37E-43 T 25-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RJP_RS04365 dccdc9078005c459efaab16b2daff1af 427 SUPERFAMILY SSF51905 312 419 4.37E-43 T 25-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RJP_RS04365 dccdc9078005c459efaab16b2daff1af 427 PANTHER PTHR13789:SF240 58 427 1.2E-98 T 25-04-2016 RJP_RS04365 dccdc9078005c459efaab16b2daff1af 427 TIGRFAM TIGR01984 UbiH: 2-polyprenyl-6-methoxyphenol 4-hydroxylase 56 425 1.2E-131 T 25-04-2016 IPR011295 2-polyprenyl-6-methoxyphenol 4-hydroxylase GO:0006744|GO:0008681 KEGG: 00130+1.14.13.-|KEGG: 00140+1.14.13.-|KEGG: 00232+1.14.13.-|KEGG: 00261+1.14.13.-|KEGG: 00340+1.14.13.-|KEGG: 00360+1.14.13.-|KEGG: 00361+1.14.13.-|KEGG: 00362+1.14.13.-|KEGG: 00363+1.14.13.-|KEGG: 00380+1.14.13.-|KEGG: 00403+1.14.13.-|KEGG: 00590+1.14.13.-|KEGG: 00591+1.14.13.-|KEGG: 00622+1.14.13.-|KEGG: 00623+1.14.13.-|KEGG: 00624+1.14.13.-|KEGG: 00625+1.14.13.-|KEGG: 00626+1.14.13.-|KEGG: 00627+1.14.13.-|KEGG: 00640+1.14.13.-|KEGG: 00643+1.14.13.-|KEGG: 00830+1.14.13.-|KEGG: 00903+1.14.13.-|KEGG: 00904+1.14.13.-|KEGG: 00905+1.14.13.-|KEGG: 00906+1.14.13.-|KEGG: 00930+1.14.13.-|KEGG: 00940+1.14.13.-|KEGG: 00941+1.14.13.-|KEGG: 00943+1.14.13.-|KEGG: 00945+1.14.13.-|KEGG: 00950+1.14.13.-|KEGG: 00966+1.14.13.-|KEGG: 00980+1.14.13.-|KEGG: 00982+1.14.13.-|KEGG: 00983+1.14.13.-|UniPathway: UPA00232 RJP_RS04365 dccdc9078005c459efaab16b2daff1af 427 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 56 78 6.7E-16 T 25-04-2016 RJP_RS04365 dccdc9078005c459efaab16b2daff1af 427 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 201 216 6.7E-16 T 25-04-2016 RJP_RS04365 dccdc9078005c459efaab16b2daff1af 427 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 325 340 6.7E-16 T 25-04-2016 RJP_RS04365 dccdc9078005c459efaab16b2daff1af 427 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 340 356 6.7E-16 T 25-04-2016 RJP_RS04365 dccdc9078005c459efaab16b2daff1af 427 ProSitePatterns PS01304 ubiH/COQ6 monooxygenase family signature. 339 352 - T 25-04-2016 IPR018168 Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6, conserved site GO:0016709|GO:0055114 UniPathway: UPA00232 RJP_RS05870 24503e21564c8d7bf2c45aed194e0045 296 TIGRFAM TIGR00510 lipA: lipoyl synthase 3 287 5.8E-119 T 25-04-2016 IPR003698 Lipoyl synthase GO:0009107|GO:0016992|GO:0051539 KEGG: 00785+2.8.1.8|MetaCyc: PWY-6987|MetaCyc: PWY-7382|UniPathway: UPA00538 RJP_RS05870 24503e21564c8d7bf2c45aed194e0045 296 Pfam PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family 7 42 6.4E-7 T 25-04-2016 IPR031691 Lipoyl synthase, N-terminal KEGG: 00785+2.8.1.8|MetaCyc: PWY-6987|MetaCyc: PWY-7382|UniPathway: UPA00538 RJP_RS05870 24503e21564c8d7bf2c45aed194e0045 296 PANTHER PTHR10949 6 285 2.4E-154 T 25-04-2016 IPR003698 Lipoyl synthase GO:0009107|GO:0016992|GO:0051539 KEGG: 00785+2.8.1.8|MetaCyc: PWY-6987|MetaCyc: PWY-7382|UniPathway: UPA00538 RJP_RS05870 24503e21564c8d7bf2c45aed194e0045 296 Hamap MF_00206 Lipoyl synthase [lipA]. 1 292 151.021 T 25-04-2016 IPR003698 Lipoyl synthase GO:0009107|GO:0016992|GO:0051539 KEGG: 00785+2.8.1.8|MetaCyc: PWY-6987|MetaCyc: PWY-7382|UniPathway: UPA00538 RJP_RS05870 24503e21564c8d7bf2c45aed194e0045 296 SUPERFAMILY SSF102114 21 282 1.31E-62 T 25-04-2016 RJP_RS05870 24503e21564c8d7bf2c45aed194e0045 296 Pfam PF04055 Radical SAM superfamily 60 219 2.4E-13 T 25-04-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 RJP_RS05870 24503e21564c8d7bf2c45aed194e0045 296 PIRSF PIRSF005963 1 295 2.3E-134 T 25-04-2016 IPR003698 Lipoyl synthase GO:0009107|GO:0016992|GO:0051539 KEGG: 00785+2.8.1.8|MetaCyc: PWY-6987|MetaCyc: PWY-7382|UniPathway: UPA00538 RJP_RS05870 24503e21564c8d7bf2c45aed194e0045 296 SMART SM00729 53 260 1.5E-14 T 25-04-2016 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 RJP_RS05870 24503e21564c8d7bf2c45aed194e0045 296 Gene3D G3DSA:3.20.20.70 22 288 1.8E-69 T 25-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 RJP_RS02215 3dd690ed46adcdf673749e4ee4a15c4d 365 SUPERFAMILY SSF52402 7 251 1.61E-51 T 25-04-2016 RJP_RS02215 3dd690ed46adcdf673749e4ee4a15c4d 365 TIGRFAM TIGR00420 trmU: tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase 10 360 4.7E-106 T 25-04-2016 IPR004506 tRNA-specific 2-thiouridylase GO:0008033|GO:0016740 RJP_RS02215 3dd690ed46adcdf673749e4ee4a15c4d 365 Pfam PF03054 tRNA methyl transferase 10 360 2.0E-128 T 25-04-2016 RJP_RS02215 3dd690ed46adcdf673749e4ee4a15c4d 365 Gene3D G3DSA:2.30.30.280 223 279 2.1E-19 T 25-04-2016 IPR023382 Adenine nucleotide alpha hydrolase-like domains GO:0016783 RJP_RS02215 3dd690ed46adcdf673749e4ee4a15c4d 365 Hamap MF_00144 tRNA-specific 2-thiouridylase MnmA [mnmA]. 9 361 39.38 T 25-04-2016 IPR004506 tRNA-specific 2-thiouridylase GO:0008033|GO:0016740 RJP_RS02215 3dd690ed46adcdf673749e4ee4a15c4d 365 PANTHER PTHR11933 11 365 1.0E-171 T 25-04-2016 IPR004506 tRNA-specific 2-thiouridylase GO:0008033|GO:0016740 RJP_RS02215 3dd690ed46adcdf673749e4ee4a15c4d 365 Gene3D G3DSA:3.40.50.620 6 216 1.5E-81 T 25-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold RJP_RS02215 3dd690ed46adcdf673749e4ee4a15c4d 365 PANTHER PTHR11933:SF10 11 365 1.0E-171 T 25-04-2016 RJP_RS02215 3dd690ed46adcdf673749e4ee4a15c4d 365 Gene3D G3DSA:2.40.30.10 283 363 1.9E-22 T 25-04-2016 RJP_RS06555 0a3090aeb66c9417864fdde7db0622d5 301 Gene3D G3DSA:3.30.70.1350 207 288 6.3E-26 T 25-04-2016 IPR027470 Cation efflux protein, cytoplasmic domain RJP_RS06555 0a3090aeb66c9417864fdde7db0622d5 301 Gene3D G3DSA:1.20.1510.10 14 205 1.1E-38 T 25-04-2016 IPR027469 Cation efflux protein transmembrane domain RJP_RS06555 0a3090aeb66c9417864fdde7db0622d5 301 PANTHER PTHR11562:SF55 6 296 1.2E-79 T 25-04-2016 RJP_RS06555 0a3090aeb66c9417864fdde7db0622d5 301 Pfam PF01545 Cation efflux family 15 206 1.8E-36 T 25-04-2016 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 RJP_RS06555 0a3090aeb66c9417864fdde7db0622d5 301 TIGRFAM TIGR01297 CDF: cation diffusion facilitator family transporter 13 286 1.4E-59 T 25-04-2016 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 RJP_RS06555 0a3090aeb66c9417864fdde7db0622d5 301 PANTHER PTHR11562 6 296 1.2E-79 T 25-04-2016 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 RJP_RS06555 0a3090aeb66c9417864fdde7db0622d5 301 Pfam PF16916 Dimerisation domain of Zinc Transporter 210 286 9.4E-23 T 25-04-2016 IPR027470 Cation efflux protein, cytoplasmic domain RJP_RS06555 0a3090aeb66c9417864fdde7db0622d5 301 SUPERFAMILY SSF161111 7 207 3.66E-44 T 25-04-2016 RJP_RS06555 0a3090aeb66c9417864fdde7db0622d5 301 SUPERFAMILY SSF160240 210 288 5.89E-20 T 25-04-2016 RJP_RS05240 07f71830e42fad9ef7189c59bdfefbe7 394 Gene3D G3DSA:2.40.30.10 300 392 1.5E-46 T 25-04-2016 RJP_RS05240 07f71830e42fad9ef7189c59bdfefbe7 394 PANTHER PTHR23115:SF112 1 392 2.5E-251 T 25-04-2016 RJP_RS05240 07f71830e42fad9ef7189c59bdfefbe7 394 Hamap MF_00118_B Elongation factor Tu [tuf]. 1 394 60.517 T 25-04-2016 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle GO:0003746|GO:0005525|GO:0005622|GO:0006414 RJP_RS05240 07f71830e42fad9ef7189c59bdfefbe7 394 Pfam PF00009 Elongation factor Tu GTP binding domain 10 201 3.2E-61 T 25-04-2016 RJP_RS05240 07f71830e42fad9ef7189c59bdfefbe7 394 Gene3D G3DSA:3.40.50.300 4 209 8.6E-72 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RJP_RS05240 07f71830e42fad9ef7189c59bdfefbe7 394 SUPERFAMILY SSF52540 9 226 6.54E-64 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RJP_RS05240 07f71830e42fad9ef7189c59bdfefbe7 394 Gene3D G3DSA:2.40.30.10 210 298 4.1E-38 T 25-04-2016 RJP_RS05240 07f71830e42fad9ef7189c59bdfefbe7 394 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 13 154 8.7E-16 T 25-04-2016 IPR005225 Small GTP-binding protein domain GO:0005525 RJP_RS05240 07f71830e42fad9ef7189c59bdfefbe7 394 PANTHER PTHR23115 1 392 2.5E-251 T 25-04-2016 RJP_RS05240 07f71830e42fad9ef7189c59bdfefbe7 394 SUPERFAMILY SSF50465 302 394 2.33E-36 T 25-04-2016 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal RJP_RS05240 07f71830e42fad9ef7189c59bdfefbe7 394 TIGRFAM TIGR00485 EF-Tu: translation elongation factor Tu 1 392 1.8E-229 T 25-04-2016 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle GO:0003746|GO:0005525|GO:0005622|GO:0006414 RJP_RS05240 07f71830e42fad9ef7189c59bdfefbe7 394 SUPERFAMILY SSF50447 205 301 2.75E-31 T 25-04-2016 IPR009000 Translation protein, beta-barrel domain RJP_RS05240 07f71830e42fad9ef7189c59bdfefbe7 394 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 51 66 - T 25-04-2016 IPR031157 Tr-type G domain, conserved site RJP_RS05240 07f71830e42fad9ef7189c59bdfefbe7 394 Pfam PF03144 Elongation factor Tu domain 2 225 293 8.2E-19 T 25-04-2016 IPR004161 Translation elongation factor EFTu/EF1A, domain 2 GO:0005525 RJP_RS05240 07f71830e42fad9ef7189c59bdfefbe7 394 Pfam PF03143 Elongation factor Tu C-terminal domain 298 392 1.4E-33 T 25-04-2016 IPR004160 Translation elongation factor EFTu/EF1A, C-terminal RJP_RS05240 07f71830e42fad9ef7189c59bdfefbe7 394 PRINTS PR00315 GTP-binding elongation factor signature 14 27 7.4E-25 T 25-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 RJP_RS05240 07f71830e42fad9ef7189c59bdfefbe7 394 PRINTS PR00315 GTP-binding elongation factor signature 58 66 7.4E-25 T 25-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 RJP_RS05240 07f71830e42fad9ef7189c59bdfefbe7 394 PRINTS PR00315 GTP-binding elongation factor signature 78 88 7.4E-25 T 25-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 RJP_RS05240 07f71830e42fad9ef7189c59bdfefbe7 394 PRINTS PR00315 GTP-binding elongation factor signature 131 140 7.4E-25 T 25-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 RJP_RS05240 07f71830e42fad9ef7189c59bdfefbe7 394 PRINTS PR00315 GTP-binding elongation factor signature 94 105 7.4E-25 T 25-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 RJP_RS05825 5c8fce532b24bdd3cf6ec715b6009e7c 392 Pfam PF00108 Thiolase, N-terminal domain 5 262 1.9E-95 T 25-04-2016 IPR020616 Thiolase, N-terminal GO:0008152|GO:0016747 RJP_RS05825 5c8fce532b24bdd3cf6ec715b6009e7c 392 TIGRFAM TIGR01930 AcCoA-C-Actrans: acetyl-CoA C-acyltransferase 9 390 1.4E-141 T 25-04-2016 IPR002155 Thiolase GO:0008152|GO:0016747 RJP_RS05825 5c8fce532b24bdd3cf6ec715b6009e7c 392 PIRSF PIRSF000429 1 392 9.2E-127 T 25-04-2016 IPR002155 Thiolase GO:0008152|GO:0016747 RJP_RS05825 5c8fce532b24bdd3cf6ec715b6009e7c 392 Gene3D G3DSA:3.40.47.10 5 124 1.1E-69 T 25-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 RJP_RS05825 5c8fce532b24bdd3cf6ec715b6009e7c 392 Gene3D G3DSA:3.40.47.10 194 275 1.1E-69 T 25-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 RJP_RS05825 5c8fce532b24bdd3cf6ec715b6009e7c 392 SUPERFAMILY SSF53901 270 390 1.31E-44 T 25-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 RJP_RS05825 5c8fce532b24bdd3cf6ec715b6009e7c 392 SUPERFAMILY SSF53901 5 269 6.76E-79 T 25-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 RJP_RS05825 5c8fce532b24bdd3cf6ec715b6009e7c 392 Pfam PF02803 Thiolase, C-terminal domain 269 390 1.9E-51 T 25-04-2016 IPR020617 Thiolase, C-terminal GO:0008152|GO:0016747 RJP_RS05825 5c8fce532b24bdd3cf6ec715b6009e7c 392 ProSitePatterns PS00737 Thiolases signature 2. 338 354 - T 25-04-2016 IPR020613 Thiolase, conserved site GO:0008152|GO:0016747 RJP_RS05825 5c8fce532b24bdd3cf6ec715b6009e7c 392 ProSitePatterns PS00098 Thiolases acyl-enzyme intermediate signature. 85 103 - T 25-04-2016 IPR020615 Thiolase, acyl-enzyme intermediate active site GO:0008152|GO:0016747 Reactome: REACT_22258 RJP_RS05825 5c8fce532b24bdd3cf6ec715b6009e7c 392 ProSitePatterns PS00099 Thiolases active site. 373 386 - T 25-04-2016 IPR020610 Thiolase, active site GO:0008152|GO:0016747 RJP_RS05825 5c8fce532b24bdd3cf6ec715b6009e7c 392 Gene3D G3DSA:3.40.47.10 276 390 5.3E-67 T 25-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 RJP_RS05825 5c8fce532b24bdd3cf6ec715b6009e7c 392 Gene3D G3DSA:3.40.47.10 143 193 5.3E-67 T 25-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 RJP_RS05825 5c8fce532b24bdd3cf6ec715b6009e7c 392 PANTHER PTHR18919:SF95 1 392 1.6E-200 T 25-04-2016 RJP_RS05825 5c8fce532b24bdd3cf6ec715b6009e7c 392 PANTHER PTHR18919 1 392 1.6E-200 T 25-04-2016 RJP_RS01675 c384af1ca4a39ef709c82f211094c115 245 TIGRFAM TIGR02795 tol_pal_ybgF: tol-pal system protein YbgF 118 230 1.3E-28 T 25-04-2016 IPR014162 Tol-Pal system, YbgF RJP_RS01675 c384af1ca4a39ef709c82f211094c115 245 SUPERFAMILY SSF48452 118 227 6.13E-12 T 25-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 RJP_RS01675 c384af1ca4a39ef709c82f211094c115 245 Pfam PF13174 Tetratricopeptide repeat 192 223 0.0026 T 25-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 RJP_RS01675 c384af1ca4a39ef709c82f211094c115 245 Gene3D G3DSA:1.25.40.10 121 224 8.5E-11 T 25-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 RJP_RS01675 c384af1ca4a39ef709c82f211094c115 245 Pfam PF13432 Tetratricopeptide repeat 121 185 4.0E-7 T 25-04-2016 RJP_RS03725 f28e12ed7f95e565ea27205ef690873c 568 TIGRFAM TIGR00717 rpsA: ribosomal protein bS1 22 533 3.3E-220 T 25-04-2016 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 RJP_RS03725 f28e12ed7f95e565ea27205ef690873c 568 Gene3D G3DSA:2.40.50.140 286 361 3.7E-27 T 25-04-2016 IPR012340 Nucleic acid-binding, OB-fold RJP_RS03725 f28e12ed7f95e565ea27205ef690873c 568 Gene3D G3DSA:2.40.50.140 457 534 1.1E-17 T 25-04-2016 IPR012340 Nucleic acid-binding, OB-fold RJP_RS03725 f28e12ed7f95e565ea27205ef690873c 568 Gene3D G3DSA:2.40.50.140 110 185 1.8E-11 T 25-04-2016 IPR012340 Nucleic acid-binding, OB-fold RJP_RS03725 f28e12ed7f95e565ea27205ef690873c 568 SUPERFAMILY SSF50249 442 551 5.89E-20 T 25-04-2016 IPR012340 Nucleic acid-binding, OB-fold RJP_RS03725 f28e12ed7f95e565ea27205ef690873c 568 Gene3D G3DSA:2.40.50.140 371 456 4.5E-23 T 25-04-2016 IPR012340 Nucleic acid-binding, OB-fold RJP_RS03725 f28e12ed7f95e565ea27205ef690873c 568 Gene3D G3DSA:2.40.50.140 35 109 1.4E-8 T 25-04-2016 IPR012340 Nucleic acid-binding, OB-fold RJP_RS03725 f28e12ed7f95e565ea27205ef690873c 568 SUPERFAMILY SSF50249 268 367 2.65E-25 T 25-04-2016 IPR012340 Nucleic acid-binding, OB-fold RJP_RS03725 f28e12ed7f95e565ea27205ef690873c 568 SUPERFAMILY SSF50249 31 125 1.56E-16 T 25-04-2016 IPR012340 Nucleic acid-binding, OB-fold RJP_RS03725 f28e12ed7f95e565ea27205ef690873c 568 PANTHER PTHR10724 13 527 6.8E-190 T 25-04-2016 RJP_RS03725 f28e12ed7f95e565ea27205ef690873c 568 PRINTS PR00681 Ribosomal protein S1 signature 303 322 1.9E-72 T 25-04-2016 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 RJP_RS03725 f28e12ed7f95e565ea27205ef690873c 568 PRINTS PR00681 Ribosomal protein S1 signature 39 57 1.9E-72 T 25-04-2016 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 RJP_RS03725 f28e12ed7f95e565ea27205ef690873c 568 PRINTS PR00681 Ribosomal protein S1 signature 57 71 1.9E-72 T 25-04-2016 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 RJP_RS03725 f28e12ed7f95e565ea27205ef690873c 568 PRINTS PR00681 Ribosomal protein S1 signature 343 361 1.9E-72 T 25-04-2016 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 RJP_RS03725 f28e12ed7f95e565ea27205ef690873c 568 PRINTS PR00681 Ribosomal protein S1 signature 121 137 1.9E-72 T 25-04-2016 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 RJP_RS03725 f28e12ed7f95e565ea27205ef690873c 568 PRINTS PR00681 Ribosomal protein S1 signature 225 246 1.9E-72 T 25-04-2016 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 RJP_RS03725 f28e12ed7f95e565ea27205ef690873c 568 PRINTS PR00681 Ribosomal protein S1 signature 139 156 1.9E-72 T 25-04-2016 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 RJP_RS03725 f28e12ed7f95e565ea27205ef690873c 568 PRINTS PR00681 Ribosomal protein S1 signature 97 116 1.9E-72 T 25-04-2016 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 RJP_RS03725 f28e12ed7f95e565ea27205ef690873c 568 PRINTS PR00681 Ribosomal protein S1 signature 168 188 1.9E-72 T 25-04-2016 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 RJP_RS03725 f28e12ed7f95e565ea27205ef690873c 568 Gene3D G3DSA:2.40.50.140 205 285 3.9E-29 T 25-04-2016 IPR012340 Nucleic acid-binding, OB-fold RJP_RS03725 f28e12ed7f95e565ea27205ef690873c 568 SUPERFAMILY SSF50249 117 198 2.61E-13 T 25-04-2016 IPR012340 Nucleic acid-binding, OB-fold RJP_RS03725 f28e12ed7f95e565ea27205ef690873c 568 PIRSF PIRSF002111 6 547 3.7E-202 T 25-04-2016 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 RJP_RS03725 f28e12ed7f95e565ea27205ef690873c 568 SUPERFAMILY SSF50249 360 453 2.61E-19 T 25-04-2016 IPR012340 Nucleic acid-binding, OB-fold RJP_RS03725 f28e12ed7f95e565ea27205ef690873c 568 SMART SM00316 288 360 4.6E-23 T 25-04-2016 IPR022967 RNA-binding domain, S1 RJP_RS03725 f28e12ed7f95e565ea27205ef690873c 568 SMART SM00316 203 273 2.2E-26 T 25-04-2016 IPR022967 RNA-binding domain, S1 RJP_RS03725 f28e12ed7f95e565ea27205ef690873c 568 SMART SM00316 116 184 3.0E-6 T 25-04-2016 IPR022967 RNA-binding domain, S1 RJP_RS03725 f28e12ed7f95e565ea27205ef690873c 568 SMART SM00316 375 447 4.7E-20 T 25-04-2016 IPR022967 RNA-binding domain, S1 RJP_RS03725 f28e12ed7f95e565ea27205ef690873c 568 SMART SM00316 37 100 7.1E-9 T 25-04-2016 IPR022967 RNA-binding domain, S1 RJP_RS03725 f28e12ed7f95e565ea27205ef690873c 568 SMART SM00316 462 533 7.6E-18 T 25-04-2016 IPR022967 RNA-binding domain, S1 RJP_RS03725 f28e12ed7f95e565ea27205ef690873c 568 PANTHER PTHR10724:SF6 13 527 6.8E-190 T 25-04-2016 RJP_RS03725 f28e12ed7f95e565ea27205ef690873c 568 SUPERFAMILY SSF50249 203 290 8.95E-26 T 25-04-2016 IPR012340 Nucleic acid-binding, OB-fold RJP_RS03725 f28e12ed7f95e565ea27205ef690873c 568 Pfam PF00575 S1 RNA binding domain 201 273 7.2E-19 T 25-04-2016 IPR003029 S1 domain GO:0003676 RJP_RS03725 f28e12ed7f95e565ea27205ef690873c 568 Pfam PF00575 S1 RNA binding domain 287 360 2.1E-18 T 25-04-2016 IPR003029 S1 domain GO:0003676 RJP_RS03725 f28e12ed7f95e565ea27205ef690873c 568 Pfam PF00575 S1 RNA binding domain 117 184 8.6E-7 T 25-04-2016 IPR003029 S1 domain GO:0003676 RJP_RS03725 f28e12ed7f95e565ea27205ef690873c 568 Pfam PF00575 S1 RNA binding domain 376 447 1.3E-12 T 25-04-2016 IPR003029 S1 domain GO:0003676 RJP_RS03725 f28e12ed7f95e565ea27205ef690873c 568 Pfam PF00575 S1 RNA binding domain 461 533 1.2E-13 T 25-04-2016 IPR003029 S1 domain GO:0003676 RJP_RS03310 07f83c4312750d899628196f5f3d2812 778 SUPERFAMILY SSF54211 595 770 9.48E-55 T 25-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold RJP_RS03310 07f83c4312750d899628196f5f3d2812 778 Gene3D G3DSA:1.10.8.60 491 584 5.4E-29 T 25-04-2016 RJP_RS03310 07f83c4312750d899628196f5f3d2812 778 SMART SM00464 5 205 2.0E-55 T 25-04-2016 IPR003111 ATP-dependent protease La (LON), substrate-binding domain GO:0004176|GO:0006508 RJP_RS03310 07f83c4312750d899628196f5f3d2812 778 SUPERFAMILY SSF52540 314 586 1.97E-47 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RJP_RS03310 07f83c4312750d899628196f5f3d2812 778 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 703 722 6.6E-50 T 25-04-2016 RJP_RS03310 07f83c4312750d899628196f5f3d2812 778 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 356 375 6.6E-50 T 25-04-2016 RJP_RS03310 07f83c4312750d899628196f5f3d2812 778 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 673 692 6.6E-50 T 25-04-2016 RJP_RS03310 07f83c4312750d899628196f5f3d2812 778 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 595 611 6.6E-50 T 25-04-2016 RJP_RS03310 07f83c4312750d899628196f5f3d2812 778 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 726 744 6.6E-50 T 25-04-2016 RJP_RS03310 07f83c4312750d899628196f5f3d2812 778 PANTHER PTHR10046 6 776 0.0 T 25-04-2016 IPR027065 Lon protease GO:0004176|GO:0004252|GO:0005524|GO:0030163 RJP_RS03310 07f83c4312750d899628196f5f3d2812 778 ProSitePatterns PS01046 ATP-dependent serine proteases, lon family, serine active site. 676 684 - T 25-04-2016 IPR008268 Peptidase S16, active site GO:0004176|GO:0004252|GO:0006508 RJP_RS03310 07f83c4312750d899628196f5f3d2812 778 PANTHER PTHR10046:SF43 6 776 0.0 T 25-04-2016 RJP_RS03310 07f83c4312750d899628196f5f3d2812 778 Hamap MF_01973 Lon protease [lon]. 6 772 66.57 T 25-04-2016 IPR027543 Lon protease, bacterial GO:0004176|GO:0004252|GO:0005524|GO:0006508|GO:0043565 RJP_RS03310 07f83c4312750d899628196f5f3d2812 778 Pfam PF02190 ATP-dependent protease La (LON) substrate-binding domain 6 203 6.1E-27 T 25-04-2016 IPR003111 ATP-dependent protease La (LON), substrate-binding domain GO:0004176|GO:0006508 RJP_RS03310 07f83c4312750d899628196f5f3d2812 778 SMART SM00382 348 492 5.4E-10 T 25-04-2016 IPR003593 AAA+ ATPase domain RJP_RS03310 07f83c4312750d899628196f5f3d2812 778 Gene3D G3DSA:3.30.230.10 589 771 4.5E-71 T 25-04-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup RJP_RS03310 07f83c4312750d899628196f5f3d2812 778 Gene3D G3DSA:3.40.50.300 314 489 1.0E-32 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RJP_RS03310 07f83c4312750d899628196f5f3d2812 778 TIGRFAM TIGR00763 lon: endopeptidase La 7 771 6.9E-266 T 25-04-2016 IPR004815 Lon protease, bacterial/eukaryotic-type GO:0004176|GO:0005524|GO:0006508 RJP_RS03310 07f83c4312750d899628196f5f3d2812 778 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 352 489 4.3E-20 T 25-04-2016 IPR003959 ATPase, AAA-type, core GO:0005524 RJP_RS03310 07f83c4312750d899628196f5f3d2812 778 SUPERFAMILY SSF88697 5 204 2.31E-23 T 25-04-2016 IPR015947 PUA-like domain RJP_RS03310 07f83c4312750d899628196f5f3d2812 778 PIRSF PIRSF001174 1 775 3.6E-294 T 25-04-2016 IPR004815 Lon protease, bacterial/eukaryotic-type GO:0004176|GO:0005524|GO:0006508 RJP_RS03310 07f83c4312750d899628196f5f3d2812 778 Pfam PF05362 Lon protease (S16) C-terminal proteolytic domain 570 772 9.9E-94 T 25-04-2016 IPR008269 Peptidase S16, Lon C-terminal GO:0004176|GO:0004252|GO:0006508 RJP_RS03090 ff99fe130982752d82f67d778d676a1c 34 Pfam PF07866 Protein of unknown function (DUF1653) 5 29 3.3E-7 T 25-04-2016 IPR023387 DUF1653-like domain RJP_RS03090 ff99fe130982752d82f67d778d676a1c 34 Gene3D G3DSA:2.30.30.320 6 33 4.1E-8 T 25-04-2016 IPR023387 DUF1653-like domain RJP_RS04220 cb2b53b56b89052c98b0274635d7c882 230 TIGRFAM TIGR03725 T6A_YeaZ: tRNA threonylcarbamoyl adenosine modification protein YeaZ 3 216 8.9E-42 T 25-04-2016 IPR022496 tRNA threonylcarbamoyl adenosine modification protein YeaZ GO:0002949 RJP_RS04220 cb2b53b56b89052c98b0274635d7c882 230 SUPERFAMILY SSF53067 1 102 7.34E-23 T 25-04-2016 RJP_RS04220 cb2b53b56b89052c98b0274635d7c882 230 Pfam PF00814 Glycoprotease family 36 131 1.2E-15 T 25-04-2016 IPR000905 Gcp-like domain KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 RJP_RS04220 cb2b53b56b89052c98b0274635d7c882 230 Gene3D G3DSA:3.30.420.40 1 134 1.7E-31 T 25-04-2016 RJP_RS04220 cb2b53b56b89052c98b0274635d7c882 230 PANTHER PTHR11735:SF11 1 136 1.7E-25 T 25-04-2016 RJP_RS04220 cb2b53b56b89052c98b0274635d7c882 230 PANTHER PTHR11735 1 136 1.7E-25 T 25-04-2016 RJP_RS05105 3f9231d9dfb64e95b81e1ba8ed5e5d82 136 Pfam PF01196 Ribosomal protein L17 20 116 1.9E-32 T 25-04-2016 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RJP_RS05105 3f9231d9dfb64e95b81e1ba8ed5e5d82 136 PANTHER PTHR14413 1 123 1.4E-56 T 25-04-2016 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RJP_RS05105 3f9231d9dfb64e95b81e1ba8ed5e5d82 136 SUPERFAMILY SSF64263 1 119 3.01E-47 T 25-04-2016 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RJP_RS05105 3f9231d9dfb64e95b81e1ba8ed5e5d82 136 ProSitePatterns PS01167 Ribosomal protein L17 signature. 34 56 - T 25-04-2016 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RJP_RS05105 3f9231d9dfb64e95b81e1ba8ed5e5d82 136 Gene3D G3DSA:3.90.1030.10 1 117 3.6E-46 T 25-04-2016 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RJP_RS05105 3f9231d9dfb64e95b81e1ba8ed5e5d82 136 Hamap MF_01368 50S ribosomal protein L17 [rplQ]. 5 116 24.161 T 25-04-2016 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RJP_RS05105 3f9231d9dfb64e95b81e1ba8ed5e5d82 136 TIGRFAM TIGR00059 L17: ribosomal protein bL17 8 117 3.6E-40 T 25-04-2016 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RJP_RS05105 3f9231d9dfb64e95b81e1ba8ed5e5d82 136 PANTHER PTHR14413:SF5 1 123 1.4E-56 T 25-04-2016 RJP_RS03850 4101449576c373f60b1967beffb32520 173 PANTHER PTHR23407:SF1 1 167 1.4E-18 T 25-04-2016 IPR002698 5-formyltetrahydrofolate cyclo-ligase RJP_RS03850 4101449576c373f60b1967beffb32520 173 Gene3D G3DSA:3.40.50.10420 1 171 4.2E-30 T 25-04-2016 IPR024185 5-formyltetrahydrofolate cyclo-ligase-like domain RJP_RS03850 4101449576c373f60b1967beffb32520 173 PANTHER PTHR23407 1 167 1.4E-18 T 25-04-2016 RJP_RS03850 4101449576c373f60b1967beffb32520 173 PIRSF PIRSF006806 1 173 1.3E-63 T 25-04-2016 IPR002698 5-formyltetrahydrofolate cyclo-ligase RJP_RS03850 4101449576c373f60b1967beffb32520 173 SUPERFAMILY SSF100950 1 170 2.93E-38 T 25-04-2016 RJP_RS03850 4101449576c373f60b1967beffb32520 173 Pfam PF01812 5-formyltetrahydrofolate cyclo-ligase family 3 170 5.4E-31 T 25-04-2016 IPR002698 5-formyltetrahydrofolate cyclo-ligase RJP_RS03850 4101449576c373f60b1967beffb32520 173 TIGRFAM TIGR02727 MTHFS_bact: 5-formyltetrahydrofolate cyclo-ligase 3 170 1.0E-30 T 25-04-2016 IPR002698 5-formyltetrahydrofolate cyclo-ligase RJP_RS05125 310b920c842c322de38444ba31e9a746 212 Hamap MF_00235 Adenylate kinase [adk]. 1 210 38.23 T 25-04-2016 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|MetaCyc: PWY-7219|UniPathway: UPA00588 RJP_RS05125 310b920c842c322de38444ba31e9a746 212 PANTHER PTHR23359 1 209 7.7E-73 T 25-04-2016 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|MetaCyc: PWY-7219|UniPathway: UPA00588 RJP_RS05125 310b920c842c322de38444ba31e9a746 212 SUPERFAMILY SSF52540 2 210 4.24E-38 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RJP_RS05125 310b920c842c322de38444ba31e9a746 212 Pfam PF00406 Adenylate kinase 6 187 3.7E-45 T 25-04-2016 RJP_RS05125 310b920c842c322de38444ba31e9a746 212 PRINTS PR00094 Adenylate kinase signature 81 97 1.4E-29 T 25-04-2016 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|MetaCyc: PWY-7219|UniPathway: UPA00588 RJP_RS05125 310b920c842c322de38444ba31e9a746 212 PRINTS PR00094 Adenylate kinase signature 4 17 1.4E-29 T 25-04-2016 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|MetaCyc: PWY-7219|UniPathway: UPA00588 RJP_RS05125 310b920c842c322de38444ba31e9a746 212 PRINTS PR00094 Adenylate kinase signature 32 46 1.4E-29 T 25-04-2016 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|MetaCyc: PWY-7219|UniPathway: UPA00588 RJP_RS05125 310b920c842c322de38444ba31e9a746 212 PRINTS PR00094 Adenylate kinase signature 174 188 1.4E-29 T 25-04-2016 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|MetaCyc: PWY-7219|UniPathway: UPA00588 RJP_RS05125 310b920c842c322de38444ba31e9a746 212 PRINTS PR00094 Adenylate kinase signature 157 172 1.4E-29 T 25-04-2016 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|MetaCyc: PWY-7219|UniPathway: UPA00588 RJP_RS05125 310b920c842c322de38444ba31e9a746 212 Pfam PF05191 Adenylate kinase, active site lid 123 159 8.1E-10 T 25-04-2016 IPR007862 Adenylate kinase, active site lid domain GO:0004017 KEGG: 00230+2.7.4.3|MetaCyc: PWY-7219|UniPathway: UPA00588 RJP_RS05125 310b920c842c322de38444ba31e9a746 212 Gene3D G3DSA:3.40.50.300 2 208 3.3E-66 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RJP_RS05125 310b920c842c322de38444ba31e9a746 212 ProSitePatterns PS00113 Adenylate kinase signature. 81 92 - T 25-04-2016 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|MetaCyc: PWY-7219|UniPathway: UPA00588 RJP_RS05125 310b920c842c322de38444ba31e9a746 212 TIGRFAM TIGR01351 adk: adenylate kinase 3 209 1.2E-72 T 25-04-2016 IPR006259 Adenylate kinase subfamily GO:0004017|GO:0005524|GO:0016776 KEGG: 00230+2.7.4.3|MetaCyc: PWY-7219|UniPathway: UPA00588 RJP_RS06730 d7e74dccac40bfd1b261412720ddcab2 415 TIGRFAM TIGR00883 2A0106: MFS transporter, metabolite:H+ symporter (MHS) family protein 11 398 3.8E-136 T 25-04-2016 IPR004736 Citrate-proton symport GO:0005215|GO:0006810|GO:0016021 RJP_RS06730 d7e74dccac40bfd1b261412720ddcab2 415 ProSitePatterns PS00216 Sugar transport proteins signature 1. 281 297 - T 25-04-2016 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 RJP_RS06730 d7e74dccac40bfd1b261412720ddcab2 415 Pfam PF00083 Sugar (and other) transporter 8 216 4.1E-24 T 25-04-2016 IPR005828 Major facilitator, sugar transporter-like GO:0016021|GO:0022857|GO:0055085 RJP_RS06730 d7e74dccac40bfd1b261412720ddcab2 415 Pfam PF00083 Sugar (and other) transporter 250 413 1.6E-13 T 25-04-2016 IPR005828 Major facilitator, sugar transporter-like GO:0016021|GO:0022857|GO:0055085 RJP_RS06730 d7e74dccac40bfd1b261412720ddcab2 415 ProSitePatterns PS00217 Sugar transport proteins signature 2. 112 137 - T 25-04-2016 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 RJP_RS06730 d7e74dccac40bfd1b261412720ddcab2 415 SUPERFAMILY SSF103473 2 411 3.27E-63 T 25-04-2016 IPR020846 Major facilitator superfamily domain RJP_RS06730 d7e74dccac40bfd1b261412720ddcab2 415 Gene3D G3DSA:1.20.1250.20 226 411 6.7E-24 T 25-04-2016 RJP_RS06730 d7e74dccac40bfd1b261412720ddcab2 415 Gene3D G3DSA:1.20.1250.20 3 194 8.1E-17 T 25-04-2016 RJP_RS06730 d7e74dccac40bfd1b261412720ddcab2 415 PANTHER PTHR23508:SF1 2 413 1.7E-130 T 25-04-2016 RJP_RS06730 d7e74dccac40bfd1b261412720ddcab2 415 PANTHER PTHR23508 2 413 1.7E-130 T 25-04-2016 RJP_RS06795 3be81b2e68adcd356cb92549ffe2371c 509 Gene3D G3DSA:1.20.272.10 257 370 1.0E-10 T 25-04-2016 RJP_RS06795 3be81b2e68adcd356cb92549ffe2371c 509 Pfam PF13177 DNA polymerase III, delta subunit 27 189 1.8E-42 T 25-04-2016 RJP_RS06795 3be81b2e68adcd356cb92549ffe2371c 509 PANTHER PTHR11669 9 369 1.7E-130 T 25-04-2016 RJP_RS06795 3be81b2e68adcd356cb92549ffe2371c 509 SUPERFAMILY SSF52540 38 236 8.65E-57 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RJP_RS06795 3be81b2e68adcd356cb92549ffe2371c 509 Gene3D G3DSA:3.40.50.300 22 177 3.4E-60 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RJP_RS06795 3be81b2e68adcd356cb92549ffe2371c 509 SMART SM00382 44 189 3.4E-9 T 25-04-2016 IPR003593 AAA+ ATPase domain RJP_RS06795 3be81b2e68adcd356cb92549ffe2371c 509 Pfam PF12169 DNA polymerase III subunits gamma and tau domain III 247 377 1.1E-21 T 25-04-2016 IPR022754 DNA polymerase III, gamma subunit, domain III GO:0003887 RJP_RS06795 3be81b2e68adcd356cb92549ffe2371c 509 TIGRFAM TIGR02397 dnaX_nterm: DNA polymerase III, subunit gamma and tau 10 370 2.6E-131 T 25-04-2016 IPR012763 DNA polymerase III, subunit gamma/ tau GO:0003887|GO:0005524|GO:0006260|GO:0009360 RJP_RS06795 3be81b2e68adcd356cb92549ffe2371c 509 Gene3D G3DSA:1.10.8.60 178 256 2.4E-28 T 25-04-2016 RJP_RS06795 3be81b2e68adcd356cb92549ffe2371c 509 PANTHER PTHR11669:SF0 9 369 1.7E-130 T 25-04-2016 RJP_RS06795 3be81b2e68adcd356cb92549ffe2371c 509 SUPERFAMILY SSF48019 257 379 9.35E-14 T 25-04-2016 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal GO:0003677|GO:0006260 Reactome: REACT_152|Reactome: REACT_1538|Reactome: REACT_216|Reactome: REACT_22172|Reactome: REACT_383 RJP_RS00910 1b2169de86cc5ab2e2198650e9683ee8 508 PRINTS PR00834 HtrA/DegQ protease family signature 227 244 1.8E-40 T 25-04-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 RJP_RS00910 1b2169de86cc5ab2e2198650e9683ee8 508 PRINTS PR00834 HtrA/DegQ protease family signature 189 213 1.8E-40 T 25-04-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 RJP_RS00910 1b2169de86cc5ab2e2198650e9683ee8 508 PRINTS PR00834 HtrA/DegQ protease family signature 127 139 1.8E-40 T 25-04-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 RJP_RS00910 1b2169de86cc5ab2e2198650e9683ee8 508 PRINTS PR00834 HtrA/DegQ protease family signature 148 168 1.8E-40 T 25-04-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 RJP_RS00910 1b2169de86cc5ab2e2198650e9683ee8 508 PRINTS PR00834 HtrA/DegQ protease family signature 335 347 1.8E-40 T 25-04-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 RJP_RS00910 1b2169de86cc5ab2e2198650e9683ee8 508 PRINTS PR00834 HtrA/DegQ protease family signature 249 266 1.8E-40 T 25-04-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 RJP_RS00910 1b2169de86cc5ab2e2198650e9683ee8 508 Gene3D G3DSA:2.30.42.10 298 391 4.6E-26 T 25-04-2016 IPR001478 PDZ domain GO:0005515 RJP_RS00910 1b2169de86cc5ab2e2198650e9683ee8 508 Pfam PF13180 PDZ domain 295 385 5.1E-15 T 25-04-2016 IPR001478 PDZ domain GO:0005515 RJP_RS00910 1b2169de86cc5ab2e2198650e9683ee8 508 Gene3D G3DSA:2.40.10.10 55 180 1.9E-32 T 25-04-2016 RJP_RS00910 1b2169de86cc5ab2e2198650e9683ee8 508 Gene3D G3DSA:2.40.10.10 181 297 6.1E-43 T 25-04-2016 RJP_RS00910 1b2169de86cc5ab2e2198650e9683ee8 508 Gene3D G3DSA:2.30.42.10 421 505 3.1E-8 T 25-04-2016 IPR001478 PDZ domain GO:0005515 RJP_RS00910 1b2169de86cc5ab2e2198650e9683ee8 508 SUPERFAMILY SSF50494 107 292 9.41E-63 T 25-04-2016 IPR009003 Peptidase S1, PA clan RJP_RS00910 1b2169de86cc5ab2e2198650e9683ee8 508 SUPERFAMILY SSF50494 54 77 9.41E-63 T 25-04-2016 IPR009003 Peptidase S1, PA clan RJP_RS00910 1b2169de86cc5ab2e2198650e9683ee8 508 PANTHER PTHR22939 100 477 7.0E-109 T 25-04-2016 RJP_RS00910 1b2169de86cc5ab2e2198650e9683ee8 508 PANTHER PTHR22939 1 76 7.0E-109 T 25-04-2016 RJP_RS00910 1b2169de86cc5ab2e2198650e9683ee8 508 PANTHER PTHR22939:SF79 100 477 7.0E-109 T 25-04-2016 RJP_RS00910 1b2169de86cc5ab2e2198650e9683ee8 508 PANTHER PTHR22939:SF79 1 76 7.0E-109 T 25-04-2016 RJP_RS00910 1b2169de86cc5ab2e2198650e9683ee8 508 SUPERFAMILY SSF50156 421 505 1.17E-6 T 25-04-2016 IPR001478 PDZ domain GO:0005515 RJP_RS00910 1b2169de86cc5ab2e2198650e9683ee8 508 TIGRFAM TIGR02037 degP_htrA_DO: peptidase Do 55 503 8.8E-134 T 25-04-2016 IPR011782 Peptidase S1C, Do GO:0004252|GO:0006508 RJP_RS00910 1b2169de86cc5ab2e2198650e9683ee8 508 Pfam PF13365 Trypsin-like peptidase domain 118 256 4.4E-33 T 25-04-2016 RJP_RS00910 1b2169de86cc5ab2e2198650e9683ee8 508 SUPERFAMILY SSF50156 253 378 5.78E-23 T 25-04-2016 IPR001478 PDZ domain GO:0005515 RJP_RS00910 1b2169de86cc5ab2e2198650e9683ee8 508 SMART SM00228 412 498 2.0 T 25-04-2016 IPR001478 PDZ domain GO:0005515 RJP_RS00910 1b2169de86cc5ab2e2198650e9683ee8 508 SMART SM00228 295 377 2.2E-13 T 25-04-2016 IPR001478 PDZ domain GO:0005515 RJP_RS00380 9569c5ce8884b2f5711a0ccfe7166089 171 SUPERFAMILY SSF55653 57 148 3.79E-23 T 25-04-2016 IPR020069 Ribosomal protein L9, C-terminal RJP_RS00380 9569c5ce8884b2f5711a0ccfe7166089 171 Gene3D G3DSA:3.40.5.10 1 51 4.4E-20 T 25-04-2016 IPR020070 Ribosomal protein L9, N-terminal RJP_RS00380 9569c5ce8884b2f5711a0ccfe7166089 171 TIGRFAM TIGR00158 L9: ribosomal protein bL9 1 146 1.1E-33 T 25-04-2016 IPR020594 Ribosomal protein L9, bacteria/chloroplast GO:0003735|GO:0005622|GO:0005840|GO:0006412 RJP_RS00380 9569c5ce8884b2f5711a0ccfe7166089 171 ProSitePatterns PS00651 Ribosomal protein L9 signature. 13 40 - T 25-04-2016 IPR020070 Ribosomal protein L9, N-terminal RJP_RS00380 9569c5ce8884b2f5711a0ccfe7166089 171 PANTHER PTHR21368 1 164 6.7E-40 T 25-04-2016 IPR000244 Ribosomal protein L9 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RJP_RS00380 9569c5ce8884b2f5711a0ccfe7166089 171 Hamap MF_00503 50S ribosomal protein L9 [rplI]. 1 148 22.956 T 25-04-2016 IPR020594 Ribosomal protein L9, bacteria/chloroplast GO:0003735|GO:0005622|GO:0005840|GO:0006412 RJP_RS00380 9569c5ce8884b2f5711a0ccfe7166089 171 Pfam PF03948 Ribosomal protein L9, C-terminal domain 64 146 6.4E-22 T 25-04-2016 IPR020069 Ribosomal protein L9, C-terminal RJP_RS00380 9569c5ce8884b2f5711a0ccfe7166089 171 SUPERFAMILY SSF55658 1 57 1.53E-15 T 25-04-2016 IPR009027 Ribosomal protein L9/RNase H1, N-terminal RJP_RS00380 9569c5ce8884b2f5711a0ccfe7166089 171 Gene3D G3DSA:3.10.430.100 61 147 7.7E-23 T 25-04-2016 IPR020069 Ribosomal protein L9, C-terminal RJP_RS00380 9569c5ce8884b2f5711a0ccfe7166089 171 Pfam PF01281 Ribosomal protein L9, N-terminal domain 1 45 3.4E-19 T 25-04-2016 IPR020070 Ribosomal protein L9, N-terminal RJP_RS05720 6143634242e487bb6b0c49ff8680232f 99 PANTHER PTHR12910 16 92 3.2E-13 T 25-04-2016 IPR007763 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 12 GO:0008137|GO:0009055|GO:0016020 RJP_RS05720 6143634242e487bb6b0c49ff8680232f 99 Pfam PF05071 NADH ubiquinone oxidoreductase subunit NDUFA12 15 99 2.6E-16 T 25-04-2016 IPR007763 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 12 GO:0008137|GO:0009055|GO:0016020 RJP_RS05720 6143634242e487bb6b0c49ff8680232f 99 PANTHER PTHR12910:SF2 16 92 3.2E-13 T 25-04-2016 RJP_RS00490 ba117e6382a5187d8a11fca3215c674b 140 Pfam PF00334 Nucleoside diphosphate kinase 4 138 7.8E-51 T 25-04-2016 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 RJP_RS00490 ba117e6382a5187d8a11fca3215c674b 140 PRINTS PR01243 Nucleoside diphosphate kinase signature 91 107 6.3E-36 T 25-04-2016 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 RJP_RS00490 ba117e6382a5187d8a11fca3215c674b 140 PRINTS PR01243 Nucleoside diphosphate kinase signature 70 87 6.3E-36 T 25-04-2016 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 RJP_RS00490 ba117e6382a5187d8a11fca3215c674b 140 PRINTS PR01243 Nucleoside diphosphate kinase signature 50 69 6.3E-36 T 25-04-2016 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 RJP_RS00490 ba117e6382a5187d8a11fca3215c674b 140 PRINTS PR01243 Nucleoside diphosphate kinase signature 6 28 6.3E-36 T 25-04-2016 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 RJP_RS00490 ba117e6382a5187d8a11fca3215c674b 140 PRINTS PR01243 Nucleoside diphosphate kinase signature 114 133 6.3E-36 T 25-04-2016 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 RJP_RS00490 ba117e6382a5187d8a11fca3215c674b 140 Hamap MF_00451 Nucleoside diphosphate kinase [ndk]. 3 138 32.772 T 25-04-2016 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 RJP_RS00490 ba117e6382a5187d8a11fca3215c674b 140 ProSitePatterns PS00469 Nucleoside diphosphate kinases active site. 114 122 - T 25-04-2016 IPR023005 Nucleoside diphosphate kinase, active site KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 RJP_RS00490 ba117e6382a5187d8a11fca3215c674b 140 Gene3D G3DSA:3.30.70.141 1 139 1.2E-52 T 25-04-2016 RJP_RS00490 ba117e6382a5187d8a11fca3215c674b 140 SUPERFAMILY SSF54919 1 139 1.23E-51 T 25-04-2016 RJP_RS00490 ba117e6382a5187d8a11fca3215c674b 140 PANTHER PTHR11349 1 140 1.6E-54 T 25-04-2016 RJP_RS00490 ba117e6382a5187d8a11fca3215c674b 140 SMART SM00562 3 140 6.6E-80 T 25-04-2016 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 RJP_RS01325 a9bd1e543b17139cda65cf138a8880af 274 Pfam PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal 4 68 9.7E-20 T 25-04-2016 IPR023180 Tetrahydrodipicolinate-N-succinyltransferase, chain A, domain 1 KEGG: 00300+2.3.1.117|UniPathway: UPA00034 RJP_RS01325 a9bd1e543b17139cda65cf138a8880af 274 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 134 168 8.0E-6 T 25-04-2016 IPR001451 Hexapeptide repeat RJP_RS01325 a9bd1e543b17139cda65cf138a8880af 274 PANTHER PTHR19136:SF52 17 274 3.2E-110 T 25-04-2016 IPR005664 Tetrahydrodipicolinate N-succinyltransferase, transferase hexapeptide repeat family GO:0008666|GO:0009089 KEGG: 00300+2.3.1.117|UniPathway: UPA00034 RJP_RS01325 a9bd1e543b17139cda65cf138a8880af 274 SUPERFAMILY SSF51161 32 259 7.21E-66 T 25-04-2016 IPR011004 Trimeric LpxA-like RJP_RS01325 a9bd1e543b17139cda65cf138a8880af 274 Gene3D G3DSA:2.160.10.10 93 257 5.0E-55 T 25-04-2016 RJP_RS01325 a9bd1e543b17139cda65cf138a8880af 274 Gene3D G3DSA:1.10.166.10 1 68 4.6E-21 T 25-04-2016 IPR023180 Tetrahydrodipicolinate-N-succinyltransferase, chain A, domain 1 KEGG: 00300+2.3.1.117|UniPathway: UPA00034 RJP_RS01325 a9bd1e543b17139cda65cf138a8880af 274 TIGRFAM TIGR00965 dapD: 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase 4 274 6.1E-151 T 25-04-2016 IPR005664 Tetrahydrodipicolinate N-succinyltransferase, transferase hexapeptide repeat family GO:0008666|GO:0009089 KEGG: 00300+2.3.1.117|UniPathway: UPA00034 RJP_RS01325 a9bd1e543b17139cda65cf138a8880af 274 PANTHER PTHR19136 17 274 3.2E-110 T 25-04-2016 RJP_RS01325 a9bd1e543b17139cda65cf138a8880af 274 Pfam PF14602 Hexapeptide repeat of succinyl-transferase 177 211 4.5E-13 T 25-04-2016 IPR001451 Hexapeptide repeat RJP_RS01325 a9bd1e543b17139cda65cf138a8880af 274 Hamap MF_00811 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase [dapD]. 1 274 52.477 T 25-04-2016 IPR005664 Tetrahydrodipicolinate N-succinyltransferase, transferase hexapeptide repeat family GO:0008666|GO:0009089 KEGG: 00300+2.3.1.117|UniPathway: UPA00034 RJP_RS04400 61504e57091cb9ef139115d57a77ffad 561 Pfam PF03717 Penicillin-binding Protein dimerisation domain 69 193 1.8E-14 T 25-04-2016 IPR005311 Penicillin-binding protein, dimerisation domain GO:0008658 RJP_RS04400 61504e57091cb9ef139115d57a77ffad 561 PANTHER PTHR30627 13 561 4.8E-123 T 25-04-2016 RJP_RS04400 61504e57091cb9ef139115d57a77ffad 561 SUPERFAMILY SSF56601 212 551 3.22E-75 T 25-04-2016 IPR012338 Beta-lactamase/transpeptidase-like RJP_RS04400 61504e57091cb9ef139115d57a77ffad 561 Pfam PF00905 Penicillin binding protein transpeptidase domain 240 522 5.8E-57 T 25-04-2016 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 RJP_RS04400 61504e57091cb9ef139115d57a77ffad 561 SUPERFAMILY SSF56519 67 197 4.97E-31 T 25-04-2016 IPR005311 Penicillin-binding protein, dimerisation domain GO:0008658 RJP_RS04400 61504e57091cb9ef139115d57a77ffad 561 PANTHER PTHR30627:SF1 13 561 4.8E-123 T 25-04-2016 RJP_RS04400 61504e57091cb9ef139115d57a77ffad 561 Gene3D G3DSA:3.40.710.10 212 547 3.1E-74 T 25-04-2016 IPR012338 Beta-lactamase/transpeptidase-like RJP_RS04400 61504e57091cb9ef139115d57a77ffad 561 Gene3D G3DSA:3.90.1310.10 137 198 1.7E-12 T 25-04-2016 RJP_RS03870 27becbdbdc262dc75871035016cdbaa8 335 Pfam PF08669 Glycine cleavage T-protein C-terminal barrel domain 246 333 1.8E-10 T 25-04-2016 IPR013977 Glycine cleavage T-protein, C-terminal barrel domain KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10 RJP_RS03870 27becbdbdc262dc75871035016cdbaa8 335 TIGRFAM TIGR03774 RPE2: rickettsial palindromic element RPE2 domain 34 68 6.8E-22 T 25-04-2016 IPR022436 Rickettsia palindromic element RPE2 RJP_RS03870 27becbdbdc262dc75871035016cdbaa8 335 SUPERFAMILY SSF103025 4 37 4.36E-41 T 25-04-2016 RJP_RS03870 27becbdbdc262dc75871035016cdbaa8 335 SUPERFAMILY SSF103025 198 262 4.36E-41 T 25-04-2016 RJP_RS03870 27becbdbdc262dc75871035016cdbaa8 335 SUPERFAMILY SSF103025 70 160 4.36E-41 T 25-04-2016 RJP_RS03870 27becbdbdc262dc75871035016cdbaa8 335 PANTHER PTHR22602:SF0 59 185 3.3E-60 T 25-04-2016 RJP_RS03870 27becbdbdc262dc75871035016cdbaa8 335 PANTHER PTHR22602:SF0 1 33 3.3E-60 T 25-04-2016 RJP_RS03870 27becbdbdc262dc75871035016cdbaa8 335 PANTHER PTHR22602:SF0 206 314 3.3E-60 T 25-04-2016 RJP_RS03870 27becbdbdc262dc75871035016cdbaa8 335 TIGRFAM TIGR03317 ygfZ_signature: folate-binding protein YgfZ 216 271 8.1E-19 T 25-04-2016 IPR017703 YgfZ/GcvT conserved site RJP_RS03870 27becbdbdc262dc75871035016cdbaa8 335 PANTHER PTHR22602 59 185 3.3E-60 T 25-04-2016 RJP_RS03870 27becbdbdc262dc75871035016cdbaa8 335 PANTHER PTHR22602 1 33 3.3E-60 T 25-04-2016 RJP_RS03870 27becbdbdc262dc75871035016cdbaa8 335 PANTHER PTHR22602 206 314 3.3E-60 T 25-04-2016 RJP_RS03870 27becbdbdc262dc75871035016cdbaa8 335 Gene3D G3DSA:3.30.70.1400 71 124 3.0E-15 T 25-04-2016 RJP_RS03870 27becbdbdc262dc75871035016cdbaa8 335 Gene3D G3DSA:3.30.70.1400 8 38 3.0E-15 T 25-04-2016 RJP_RS03715 e8fcee498bcefd3ba9322416a9540f49 67 Gene3D G3DSA:1.10.260.40 3 64 3.5E-16 T 25-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 RJP_RS03715 e8fcee498bcefd3ba9322416a9540f49 67 SUPERFAMILY SSF47413 4 65 1.13E-13 T 25-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 RJP_RS03715 e8fcee498bcefd3ba9322416a9540f49 67 SMART SM00530 8 63 3.2E-9 T 25-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 RJP_RS03715 e8fcee498bcefd3ba9322416a9540f49 67 Pfam PF01381 Helix-turn-helix 10 57 4.2E-11 T 25-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 RJP_RS01170 1817e809df606c12f23f0502cd3823dc 449 Pfam PF02978 Signal peptide binding domain 328 428 3.7E-31 T 25-04-2016 IPR004125 Signal recognition particle, SRP54 subunit, M-domain GO:0006614|GO:0008312|GO:0048500 RJP_RS01170 1817e809df606c12f23f0502cd3823dc 449 SUPERFAMILY SSF47446 328 430 5.72E-35 T 25-04-2016 IPR004125 Signal recognition particle, SRP54 subunit, M-domain GO:0006614|GO:0008312|GO:0048500 RJP_RS01170 1817e809df606c12f23f0502cd3823dc 449 Gene3D G3DSA:1.20.120.140 2 88 1.5E-29 T 25-04-2016 RJP_RS01170 1817e809df606c12f23f0502cd3823dc 449 Pfam PF00448 SRP54-type protein, GTPase domain 104 296 1.7E-71 T 25-04-2016 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: REACT_15380 RJP_RS01170 1817e809df606c12f23f0502cd3823dc 449 SMART SM00963 1 86 3.1E-31 T 25-04-2016 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: REACT_15380 RJP_RS01170 1817e809df606c12f23f0502cd3823dc 449 SMART SM00962 102 297 2.5E-99 T 25-04-2016 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: REACT_15380 RJP_RS01170 1817e809df606c12f23f0502cd3823dc 449 Gene3D G3DSA:3.40.50.300 96 298 4.2E-70 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RJP_RS01170 1817e809df606c12f23f0502cd3823dc 449 SMART SM00382 101 248 5.9E-6 T 25-04-2016 IPR003593 AAA+ ATPase domain RJP_RS01170 1817e809df606c12f23f0502cd3823dc 449 SUPERFAMILY SSF52540 42 355 1.01E-47 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RJP_RS01170 1817e809df606c12f23f0502cd3823dc 449 TIGRFAM TIGR00959 ffh: signal recognition particle protein 2 430 1.3E-177 T 25-04-2016 IPR004780 Signal recognition particle protein Ffh GO:0003924|GO:0005525|GO:0006614|GO:0048500 RJP_RS01170 1817e809df606c12f23f0502cd3823dc 449 PANTHER PTHR11564:SF7 1 435 7.2E-216 T 25-04-2016 IPR004780 Signal recognition particle protein Ffh GO:0003924|GO:0005525|GO:0006614|GO:0048500 RJP_RS01170 1817e809df606c12f23f0502cd3823dc 449 Gene3D G3DSA:1.10.260.30 328 432 4.1E-37 T 25-04-2016 IPR004125 Signal recognition particle, SRP54 subunit, M-domain GO:0006614|GO:0008312|GO:0048500 RJP_RS01170 1817e809df606c12f23f0502cd3823dc 449 ProSitePatterns PS00300 SRP54-type proteins GTP-binding domain signature. 270 283 - T 25-04-2016 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: REACT_15380 RJP_RS01170 1817e809df606c12f23f0502cd3823dc 449 Pfam PF02881 SRP54-type protein, helical bundle domain 5 82 9.1E-19 T 25-04-2016 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: REACT_15380 RJP_RS01170 1817e809df606c12f23f0502cd3823dc 449 Hamap MF_00306 Signal recognition particle 54 kDa protein [srp54]. 5 448 32.482 T 25-04-2016 IPR022941 Signal recognition particle, SRP54 subunit GO:0003924|GO:0005525|GO:0006614|GO:0048500 RJP_RS01170 1817e809df606c12f23f0502cd3823dc 449 PANTHER PTHR11564 1 435 7.2E-216 T 25-04-2016 RJP_RS00645 82909b2292ac6aa4a34c4efc7342ef8b 459 PANTHER PTHR10890 4 457 1.6E-185 T 25-04-2016 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 RJP_RS00645 82909b2292ac6aa4a34c4efc7342ef8b 459 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 229 250 6.3E-28 T 25-04-2016 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 RJP_RS00645 82909b2292ac6aa4a34c4efc7342ef8b 459 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 198 216 6.3E-28 T 25-04-2016 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 RJP_RS00645 82909b2292ac6aa4a34c4efc7342ef8b 459 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 28 39 6.3E-28 T 25-04-2016 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 RJP_RS00645 82909b2292ac6aa4a34c4efc7342ef8b 459 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 66 75 6.3E-28 T 25-04-2016 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 RJP_RS00645 82909b2292ac6aa4a34c4efc7342ef8b 459 Pfam PF09190 DALR domain 346 404 1.2E-5 T 25-04-2016 IPR015273 Cysteinyl-tRNA synthetase, class Ia, DALR GO:0000166|GO:0004817|GO:0005524|GO:0005737|GO:0006423 KEGG: 00970+6.1.1.16 RJP_RS00645 82909b2292ac6aa4a34c4efc7342ef8b 459 Hamap MF_00041 Cysteine--tRNA ligase [cysS]. 5 458 36.941 T 25-04-2016 IPR015803 Cysteine-tRNA ligase GO:0004817|GO:0005524|GO:0006423 KEGG: 00970+6.1.1.16|Reactome: REACT_71 RJP_RS00645 82909b2292ac6aa4a34c4efc7342ef8b 459 SMART SM00840 345 404 6.5E-9 T 25-04-2016 IPR015273 Cysteinyl-tRNA synthetase, class Ia, DALR GO:0000166|GO:0004817|GO:0005524|GO:0005737|GO:0006423 KEGG: 00970+6.1.1.16 RJP_RS00645 82909b2292ac6aa4a34c4efc7342ef8b 459 SUPERFAMILY SSF52374 6 322 2.28E-85 T 25-04-2016 RJP_RS00645 82909b2292ac6aa4a34c4efc7342ef8b 459 Gene3D G3DSA:3.40.50.620 21 314 5.5E-95 T 25-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold RJP_RS00645 82909b2292ac6aa4a34c4efc7342ef8b 459 Gene3D G3DSA:1.20.120.640 315 382 5.8E-7 T 25-04-2016 RJP_RS00645 82909b2292ac6aa4a34c4efc7342ef8b 459 Pfam PF01406 tRNA synthetases class I (C) catalytic domain 18 322 8.0E-116 T 25-04-2016 IPR032678 tRNA synthetases class I, catalytic domain KEGG: 00970+6.1.1.16 RJP_RS00645 82909b2292ac6aa4a34c4efc7342ef8b 459 SUPERFAMILY SSF47323 325 457 3.14E-24 T 25-04-2016 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 RJP_RS00645 82909b2292ac6aa4a34c4efc7342ef8b 459 TIGRFAM TIGR00435 cysS: cysteine--tRNA ligase 6 458 4.6E-148 T 25-04-2016 IPR015803 Cysteine-tRNA ligase GO:0004817|GO:0005524|GO:0006423 KEGG: 00970+6.1.1.16|Reactome: REACT_71 RJP_RS06335 5c7fab9dca7cb806da99da7c57fafbd2 118 SUPERFAMILY SSF56601 19 96 4.79E-8 T 25-04-2016 IPR012338 Beta-lactamase/transpeptidase-like RJP_RS06335 5c7fab9dca7cb806da99da7c57fafbd2 118 Gene3D G3DSA:3.40.710.10 1 94 1.4E-18 T 25-04-2016 IPR012338 Beta-lactamase/transpeptidase-like RJP_RS06335 5c7fab9dca7cb806da99da7c57fafbd2 118 Pfam PF00905 Penicillin binding protein transpeptidase domain 4 89 3.1E-8 T 25-04-2016 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 RJP_RS05330 6ba91c3db995e34ee241b007d93d8b82 713 PANTHER PTHR30189 433 687 1.8E-14 T 25-04-2016 RJP_RS05330 6ba91c3db995e34ee241b007d93d8b82 713 PANTHER PTHR30189 34 398 1.8E-14 T 25-04-2016 RJP_RS05330 6ba91c3db995e34ee241b007d93d8b82 713 Pfam PF04453 Organic solvent tolerance protein 283 646 1.2E-42 T 25-04-2016 IPR007543 Organic solvent tolerance protein, C-terminal GO:0010033|GO:0019867|GO:0061024 RJP_RS05330 6ba91c3db995e34ee241b007d93d8b82 713 Hamap MF_01411 LPS-assembly protein LptD [lptD]. 8 713 13.973 T 25-04-2016 IPR020889 LPS-assembly protein LptD GO:0009279|GO:0010033|GO:0015920|GO:0043165 RJP_RS05330 6ba91c3db995e34ee241b007d93d8b82 713 SUPERFAMILY SSF56935 599 680 6.11E-5 T 25-04-2016 RJP_RS05330 6ba91c3db995e34ee241b007d93d8b82 713 Gene3D G3DSA:2.60.450.10 31 176 4.3E-11 T 25-04-2016 RJP_RS03210 e436f8e647a4ce30ace462b20f171eeb 173 PANTHER PTHR36115 85 172 3.3E-12 T 25-04-2016 RJP_RS03210 e436f8e647a4ce30ace462b20f171eeb 173 Pfam PF06271 RDD family 7 167 7.7E-35 T 25-04-2016 IPR010432 RDD RJP_RS03210 e436f8e647a4ce30ace462b20f171eeb 173 PANTHER PTHR36115:SF3 85 172 3.3E-12 T 25-04-2016 RJP_RS00345 a7779a41f53539aaaf02930978f0cea2 857 Gene3D G3DSA:3.40.50.300 551 774 5.6E-53 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RJP_RS00345 a7779a41f53539aaaf02930978f0cea2 857 SUPERFAMILY SSF81923 4 157 3.66E-33 T 25-04-2016 IPR004176 Clp, N-terminal GO:0019538 RJP_RS00345 a7779a41f53539aaaf02930978f0cea2 857 ProSitePatterns PS00870 Chaperonins clpA/B signature 1. 295 307 - T 25-04-2016 IPR018368 ClpA/B, conserved site 1 GO:0005524 RJP_RS00345 a7779a41f53539aaaf02930978f0cea2 857 SUPERFAMILY SSF52540 545 851 1.54E-77 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RJP_RS00345 a7779a41f53539aaaf02930978f0cea2 857 ProSitePatterns PS00871 Chaperonins clpA/B signature 2. 630 648 - T 25-04-2016 IPR028299 ClpA/B, conserved site 2 RJP_RS00345 a7779a41f53539aaaf02930978f0cea2 857 Pfam PF02861 Clp amino terminal domain, pathogenicity island component 18 68 3.3E-9 T 25-04-2016 IPR004176 Clp, N-terminal GO:0019538 RJP_RS00345 a7779a41f53539aaaf02930978f0cea2 857 Pfam PF02861 Clp amino terminal domain, pathogenicity island component 95 145 1.4E-6 T 25-04-2016 IPR004176 Clp, N-terminal GO:0019538 RJP_RS00345 a7779a41f53539aaaf02930978f0cea2 857 Gene3D G3DSA:1.10.8.60 775 855 1.3E-31 T 25-04-2016 RJP_RS00345 a7779a41f53539aaaf02930978f0cea2 857 Gene3D G3DSA:3.40.50.300 160 343 4.3E-50 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RJP_RS00345 a7779a41f53539aaaf02930978f0cea2 857 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 674 692 1.3E-41 T 25-04-2016 IPR001270 ClpA/B family GO:0005524 RJP_RS00345 a7779a41f53539aaaf02930978f0cea2 857 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 707 721 1.3E-41 T 25-04-2016 IPR001270 ClpA/B family GO:0005524 RJP_RS00345 a7779a41f53539aaaf02930978f0cea2 857 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 600 618 1.3E-41 T 25-04-2016 IPR001270 ClpA/B family GO:0005524 RJP_RS00345 a7779a41f53539aaaf02930978f0cea2 857 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 645 663 1.3E-41 T 25-04-2016 IPR001270 ClpA/B family GO:0005524 RJP_RS00345 a7779a41f53539aaaf02930978f0cea2 857 Gene3D G3DSA:1.10.1780.10 1 149 9.9E-39 T 25-04-2016 IPR004176 Clp, N-terminal GO:0019538 RJP_RS00345 a7779a41f53539aaaf02930978f0cea2 857 Pfam PF07724 AAA domain (Cdc48 subfamily) 596 759 2.4E-53 T 25-04-2016 IPR003959 ATPase, AAA-type, core GO:0005524 RJP_RS00345 a7779a41f53539aaaf02930978f0cea2 857 SMART SM00382 596 739 1.5E-11 T 25-04-2016 IPR003593 AAA+ ATPase domain RJP_RS00345 a7779a41f53539aaaf02930978f0cea2 857 SMART SM00382 199 345 3.5E-9 T 25-04-2016 IPR003593 AAA+ ATPase domain RJP_RS00345 a7779a41f53539aaaf02930978f0cea2 857 Gene3D G3DSA:1.10.8.60 344 428 5.0E-37 T 25-04-2016 RJP_RS00345 a7779a41f53539aaaf02930978f0cea2 857 SUPERFAMILY SSF52540 158 523 4.68E-99 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RJP_RS00345 a7779a41f53539aaaf02930978f0cea2 857 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 204 321 7.2E-15 T 25-04-2016 IPR003959 ATPase, AAA-type, core GO:0005524 RJP_RS00345 a7779a41f53539aaaf02930978f0cea2 857 SMART SM01086 765 854 1.0E-36 T 25-04-2016 IPR019489 Clp ATPase, C-terminal RJP_RS00345 a7779a41f53539aaaf02930978f0cea2 857 PANTHER PTHR11638:SF18 1 857 0.0 T 25-04-2016 RJP_RS00345 a7779a41f53539aaaf02930978f0cea2 857 PANTHER PTHR11638 1 857 0.0 T 25-04-2016 RJP_RS00345 a7779a41f53539aaaf02930978f0cea2 857 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 765 845 5.5E-27 T 25-04-2016 IPR019489 Clp ATPase, C-terminal RJP_RS00345 a7779a41f53539aaaf02930978f0cea2 857 TIGRFAM TIGR03346 chaperone_ClpB: ATP-dependent chaperone protein ClpB 6 854 0.0 T 25-04-2016 IPR017730 Chaperonin ClpB GO:0005737|GO:0009408|GO:0016485 RJP_RS06040 c5b03aaa50812629a9207db76ee79e2e 136 Gene3D G3DSA:1.20.1250.20 22 135 1.8E-16 T 25-04-2016 RJP_RS06040 c5b03aaa50812629a9207db76ee79e2e 136 PANTHER PTHR23501 24 136 3.0E-30 T 25-04-2016 RJP_RS06040 c5b03aaa50812629a9207db76ee79e2e 136 SUPERFAMILY SSF103473 16 134 3.79E-24 T 25-04-2016 IPR020846 Major facilitator superfamily domain RJP_RS06040 c5b03aaa50812629a9207db76ee79e2e 136 Pfam PF07690 Major Facilitator Superfamily 31 134 5.4E-15 T 25-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 RJP_RS06040 c5b03aaa50812629a9207db76ee79e2e 136 PANTHER PTHR23501:SF65 24 136 3.0E-30 T 25-04-2016 RJP_RS06040 c5b03aaa50812629a9207db76ee79e2e 136 ProSitePatterns PS00216 Sugar transport proteins signature 1. 81 97 - T 25-04-2016 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 RJP_RS01570 ad4fca425a3116c6ce99e43dfc65b92a 282 SUPERFAMILY SSF53448 8 233 1.85E-20 T 25-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases RJP_RS01570 ad4fca425a3116c6ce99e43dfc65b92a 282 PANTHER PTHR10859 6 141 1.0E-20 T 25-04-2016 RJP_RS01570 ad4fca425a3116c6ce99e43dfc65b92a 282 PANTHER PTHR10859:SF99 6 141 1.0E-20 T 25-04-2016 RJP_RS01570 ad4fca425a3116c6ce99e43dfc65b92a 282 Gene3D G3DSA:3.90.550.10 8 166 1.3E-9 T 25-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases RJP_RS01570 ad4fca425a3116c6ce99e43dfc65b92a 282 Pfam PF00535 Glycosyl transferase family 2 10 95 3.9E-15 T 25-04-2016 IPR001173 Glycosyltransferase 2-like RJP_RS03055 bd73a0cde2d800d226314a2fdcb6dc06 338 SUPERFAMILY SSF53756 7 336 7.33E-68 T 25-04-2016 RJP_RS03055 bd73a0cde2d800d226314a2fdcb6dc06 338 Pfam PF13439 Glycosyltransferase Family 4 13 150 1.3E-8 T 25-04-2016 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain RJP_RS03055 bd73a0cde2d800d226314a2fdcb6dc06 338 PANTHER PTHR12526 13 336 3.2E-53 T 25-04-2016 RJP_RS03055 bd73a0cde2d800d226314a2fdcb6dc06 338 Pfam PF00534 Glycosyl transferases group 1 151 314 3.9E-43 T 25-04-2016 IPR001296 Glycosyl transferase, family 1 RJP_RS03055 bd73a0cde2d800d226314a2fdcb6dc06 338 Gene3D G3DSA:3.40.50.2000 161 313 1.6E-26 T 25-04-2016 RJP_RS06725 c08c6ca05e2f0e0570c0f8cd6db83bca 209 Pfam PF02677 Uncharacterized BCR, COG1636 14 188 1.4E-62 T 25-04-2016 IPR003828 Protein of unknown function DUF208 RJP_RS06725 c08c6ca05e2f0e0570c0f8cd6db83bca 209 PANTHER PTHR36701 1 209 1.5E-80 T 25-04-2016 RJP_RS00050 f718f560b47123f44ac2c24db1ae747d 145 PANTHER PTHR30272 2 145 3.6E-66 T 25-04-2016 RJP_RS00050 f718f560b47123f44ac2c24db1ae747d 145 Pfam PF07977 FabA-like domain 12 135 1.5E-33 T 25-04-2016 IPR013114 Beta-hydroxydecanoyl thiol ester dehydrase, FabA/FabZ KEGG: 00061+4.2.1.59|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWYG-321 RJP_RS00050 f718f560b47123f44ac2c24db1ae747d 145 Gene3D G3DSA:3.10.129.10 2 143 2.4E-54 T 25-04-2016 IPR029069 HotDog domain RJP_RS00050 f718f560b47123f44ac2c24db1ae747d 145 Hamap MF_00406 3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabZ [fabZ]. 3 143 33.654 T 25-04-2016 IPR010084 Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ GO:0005737|GO:0006633|GO:0016836 KEGG: 00061+4.2.1.59|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWYG-321 RJP_RS00050 f718f560b47123f44ac2c24db1ae747d 145 TIGRFAM TIGR01750 fabZ: beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ 3 141 2.5E-54 T 25-04-2016 IPR010084 Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ GO:0005737|GO:0006633|GO:0016836 KEGG: 00061+4.2.1.59|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWYG-321 RJP_RS00050 f718f560b47123f44ac2c24db1ae747d 145 SUPERFAMILY SSF54637 2 141 1.44E-46 T 25-04-2016 IPR029069 HotDog domain RJP_RS04750 4a440b1709151581a59c5813499cdc9f 514 PANTHER PTHR22855 1 514 0.0 T 25-04-2016 RJP_RS04750 4a440b1709151581a59c5813499cdc9f 514 Pfam PF01039 Carboxyl transferase domain 31 512 1.2E-199 T 25-04-2016 IPR000022 Carboxyl transferase KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 RJP_RS04750 4a440b1709151581a59c5813499cdc9f 514 Gene3D G3DSA:3.90.226.10 12 256 2.8E-82 T 25-04-2016 IPR029045 ClpP/crotonase-like domain RJP_RS04750 4a440b1709151581a59c5813499cdc9f 514 SUPERFAMILY SSF52096 8 258 2.23E-76 T 25-04-2016 IPR029045 ClpP/crotonase-like domain RJP_RS04750 4a440b1709151581a59c5813499cdc9f 514 SUPERFAMILY SSF52096 255 514 2.84E-88 T 25-04-2016 IPR029045 ClpP/crotonase-like domain RJP_RS04750 4a440b1709151581a59c5813499cdc9f 514 Gene3D G3DSA:3.90.226.10 257 514 2.6E-100 T 25-04-2016 IPR029045 ClpP/crotonase-like domain RJP_RS04750 4a440b1709151581a59c5813499cdc9f 514 PANTHER PTHR22855:SF37 1 514 0.0 T 25-04-2016 RJP_RS04155 f8725e5b8552f24b2812ca00e07233de 648 SMART SM00487 118 312 3.4E-25 T 25-04-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain RJP_RS04155 f8725e5b8552f24b2812ca00e07233de 648 SMART SM00490 415 512 1.0E-6 T 25-04-2016 IPR001650 Helicase, C-terminal RJP_RS04155 f8725e5b8552f24b2812ca00e07233de 648 Gene3D G3DSA:3.40.50.300 381 556 2.4E-26 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RJP_RS04155 f8725e5b8552f24b2812ca00e07233de 648 Pfam PF00270 DEAD/DEAH box helicase 126 285 6.5E-16 T 25-04-2016 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 RJP_RS04155 f8725e5b8552f24b2812ca00e07233de 648 PANTHER PTHR30580 1 648 5.5E-191 T 25-04-2016 RJP_RS04155 f8725e5b8552f24b2812ca00e07233de 648 TIGRFAM TIGR00595 priA: primosomal protein N' 141 644 6.9E-178 T 25-04-2016 IPR005259 Primosomal protein N' GO:0003677|GO:0004003|GO:0006260|GO:0032508 RJP_RS04155 f8725e5b8552f24b2812ca00e07233de 648 Gene3D G3DSA:3.40.50.300 122 300 6.9E-36 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RJP_RS04155 f8725e5b8552f24b2812ca00e07233de 648 Pfam PF00271 Helicase conserved C-terminal domain 405 511 9.6E-6 T 25-04-2016 IPR001650 Helicase, C-terminal RJP_RS04155 f8725e5b8552f24b2812ca00e07233de 648 SUPERFAMILY SSF52540 429 534 6.8E-28 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RJP_RS04155 f8725e5b8552f24b2812ca00e07233de 648 SUPERFAMILY SSF52540 137 188 6.8E-28 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RJP_RS04155 f8725e5b8552f24b2812ca00e07233de 648 Hamap MF_00983 Probable primosomal protein N' [priA]. 6 647 24.221 T 25-04-2016 IPR005259 Primosomal protein N' GO:0003677|GO:0004003|GO:0006260|GO:0032508 RJP_RS04155 f8725e5b8552f24b2812ca00e07233de 648 SUPERFAMILY SSF52540 65 297 1.25E-38 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RJP_RS01695 0e0f0183c18090d6852d79c1b3858ef4 159 Hamap MF_00532_B 30S ribosomal protein S9 [rpsI]. 30 159 32.479 T 25-04-2016 IPR023035 Ribosomal protein S9, bacterial/plastid RJP_RS01695 0e0f0183c18090d6852d79c1b3858ef4 159 SUPERFAMILY SSF54211 35 159 3.26E-46 T 25-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold RJP_RS01695 0e0f0183c18090d6852d79c1b3858ef4 159 Gene3D G3DSA:3.30.230.10 34 159 2.8E-48 T 25-04-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup RJP_RS01695 0e0f0183c18090d6852d79c1b3858ef4 159 PANTHER PTHR21569 9 159 2.1E-60 T 25-04-2016 IPR000754 Ribosomal protein S9 GO:0003735|GO:0005840|GO:0006412 RJP_RS01695 0e0f0183c18090d6852d79c1b3858ef4 159 PANTHER PTHR21569:SF1 9 159 2.1E-60 T 25-04-2016 RJP_RS01695 0e0f0183c18090d6852d79c1b3858ef4 159 Pfam PF00380 Ribosomal protein S9/S16 39 159 7.0E-46 T 25-04-2016 IPR000754 Ribosomal protein S9 GO:0003735|GO:0005840|GO:0006412 RJP_RS01695 0e0f0183c18090d6852d79c1b3858ef4 159 ProSitePatterns PS00360 Ribosomal protein S9 signature. 98 116 - T 25-04-2016 IPR020574 Ribosomal protein S9, conserved site GO:0003735|GO:0005840|GO:0006412 RJP_RS01265 f17b546f78388452f73d1304164f740e 251 SUPERFAMILY SSF48452 133 247 3.45E-7 T 25-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 RJP_RS01265 f17b546f78388452f73d1304164f740e 251 Hamap MF_00922 Outer membrane protein assembly factor BamD [bamD]. 1 234 43.076 T 25-04-2016 IPR017689 Outer membrane protein assembly factor BamD RJP_RS01265 f17b546f78388452f73d1304164f740e 251 TIGRFAM TIGR03302 OM_YfiO: outer membrane assembly lipoprotein YfiO 6 239 1.8E-76 T 25-04-2016 IPR017689 Outer membrane protein assembly factor BamD RJP_RS01265 f17b546f78388452f73d1304164f740e 251 Pfam PF13525 Outer membrane lipoprotein 35 225 1.6E-45 T 25-04-2016 RJP_RS01265 f17b546f78388452f73d1304164f740e 251 PANTHER PTHR37423 5 247 5.7E-51 T 25-04-2016 RJP_RS01265 f17b546f78388452f73d1304164f740e 251 Gene3D G3DSA:1.25.40.10 34 226 2.4E-14 T 25-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 RJP_RS01265 f17b546f78388452f73d1304164f740e 251 SUPERFAMILY SSF48452 34 152 7.21E-11 T 25-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 RJP_RS01520 492fc020c50ce7f35dc16f1ada1cc0be 365 SUPERFAMILY SSF111337 179 362 8.24E-114 T 25-04-2016 IPR003699 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA GO:0008616|GO:0016740|GO:0016853 MetaCyc: PWY-6700|UniPathway: UPA00392 RJP_RS01520 492fc020c50ce7f35dc16f1ada1cc0be 365 SUPERFAMILY SSF111337 4 148 8.24E-114 T 25-04-2016 IPR003699 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA GO:0008616|GO:0016740|GO:0016853 MetaCyc: PWY-6700|UniPathway: UPA00392 RJP_RS01520 492fc020c50ce7f35dc16f1ada1cc0be 365 PANTHER PTHR30307:SF0 181 362 9.6E-130 T 25-04-2016 RJP_RS01520 492fc020c50ce7f35dc16f1ada1cc0be 365 PANTHER PTHR30307:SF0 2 150 9.6E-130 T 25-04-2016 RJP_RS01520 492fc020c50ce7f35dc16f1ada1cc0be 365 Hamap MF_00113 S-adenosylmethionine:tRNA ribosyltransferase-isomerase [queA]. 1 363 41.625 T 25-04-2016 IPR003699 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA GO:0008616|GO:0016740|GO:0016853 MetaCyc: PWY-6700|UniPathway: UPA00392 RJP_RS01520 492fc020c50ce7f35dc16f1ada1cc0be 365 Gene3D G3DSA:3.40.1780.10 1 59 1.7E-94 T 25-04-2016 RJP_RS01520 492fc020c50ce7f35dc16f1ada1cc0be 365 Gene3D G3DSA:3.40.1780.10 201 362 1.7E-94 T 25-04-2016 RJP_RS01520 492fc020c50ce7f35dc16f1ada1cc0be 365 PANTHER PTHR30307 181 362 9.6E-130 T 25-04-2016 RJP_RS01520 492fc020c50ce7f35dc16f1ada1cc0be 365 PANTHER PTHR30307 2 150 9.6E-130 T 25-04-2016 RJP_RS01520 492fc020c50ce7f35dc16f1ada1cc0be 365 Gene3D G3DSA:2.40.10.240 67 127 7.3E-9 T 25-04-2016 RJP_RS01520 492fc020c50ce7f35dc16f1ada1cc0be 365 Pfam PF02547 Queuosine biosynthesis protein 3 362 2.2E-119 T 25-04-2016 IPR003699 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA GO:0008616|GO:0016740|GO:0016853 MetaCyc: PWY-6700|UniPathway: UPA00392 RJP_RS02410 16edf9d1e7467f15ff0064071f6cbceb 447 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 10 21 - T 25-04-2016 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 RJP_RS02410 16edf9d1e7467f15ff0064071f6cbceb 447 PRINTS PR00987 Glutamyl-tRNA synthetase signature 21 32 3.7E-23 T 25-04-2016 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 Reactome: REACT_71 RJP_RS02410 16edf9d1e7467f15ff0064071f6cbceb 447 PRINTS PR00987 Glutamyl-tRNA synthetase signature 183 193 3.7E-23 T 25-04-2016 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 Reactome: REACT_71 RJP_RS02410 16edf9d1e7467f15ff0064071f6cbceb 447 PRINTS PR00987 Glutamyl-tRNA synthetase signature 199 207 3.7E-23 T 25-04-2016 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 Reactome: REACT_71 RJP_RS02410 16edf9d1e7467f15ff0064071f6cbceb 447 PRINTS PR00987 Glutamyl-tRNA synthetase signature 7 19 3.7E-23 T 25-04-2016 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 Reactome: REACT_71 RJP_RS02410 16edf9d1e7467f15ff0064071f6cbceb 447 PRINTS PR00987 Glutamyl-tRNA synthetase signature 36 49 3.7E-23 T 25-04-2016 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 Reactome: REACT_71 RJP_RS02410 16edf9d1e7467f15ff0064071f6cbceb 447 Gene3D G3DSA:3.90.800.10 69 184 1.1E-26 T 25-04-2016 RJP_RS02410 16edf9d1e7467f15ff0064071f6cbceb 447 Gene3D G3DSA:3.40.50.620 185 234 2.2E-47 T 25-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold RJP_RS02410 16edf9d1e7467f15ff0064071f6cbceb 447 Gene3D G3DSA:3.40.50.620 3 68 2.2E-47 T 25-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold RJP_RS02410 16edf9d1e7467f15ff0064071f6cbceb 447 SUPERFAMILY SSF52374 3 300 5.63E-86 T 25-04-2016 RJP_RS02410 16edf9d1e7467f15ff0064071f6cbceb 447 PANTHER PTHR11451 3 313 2.5E-72 T 25-04-2016 RJP_RS02410 16edf9d1e7467f15ff0064071f6cbceb 447 PANTHER PTHR11451:SF41 3 313 2.5E-72 T 25-04-2016 RJP_RS02410 16edf9d1e7467f15ff0064071f6cbceb 447 Pfam PF00749 tRNA synthetases class I (E and Q), catalytic domain 3 308 8.2E-74 T 25-04-2016 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain GO:0005524|GO:0016876|GO:0043039 Reactome: REACT_71 RJP_RS02410 16edf9d1e7467f15ff0064071f6cbceb 447 Gene3D G3DSA:1.10.10.350 372 446 2.9E-12 T 25-04-2016 IPR020751 Aminoacyl-tRNA synthetase, class I, anticodon-binding domain, subdomain 2 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188 RJP_RS02410 16edf9d1e7467f15ff0064071f6cbceb 447 Gene3D G3DSA:1.10.1160.10 237 315 3.4E-10 T 25-04-2016 IPR020061 Glutamyl/glutaminyl-tRNA synthetase, class Ib, alpha-bundle domain GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0006418 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188|Reactome: REACT_71 RJP_RS02410 16edf9d1e7467f15ff0064071f6cbceb 447 SUPERFAMILY SSF48163 283 447 6.54E-30 T 25-04-2016 IPR008925 Aminoacyl-tRNA synthetase, class I, anticodon-binding GO:0000049 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188 RJP_RS02410 16edf9d1e7467f15ff0064071f6cbceb 447 Hamap MF_00022_B Glutamate--tRNA ligase [gltX]. 4 447 25.267 T 25-04-2016 IPR004527 Glutamate-tRNA ligase, bacterial/mitochondrial GO:0000166|GO:0004818|GO:0005524|GO:0005737|GO:0006424 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188 RJP_RS02410 16edf9d1e7467f15ff0064071f6cbceb 447 TIGRFAM TIGR00464 gltX_bact: glutamate--tRNA ligase 3 445 1.5E-109 T 25-04-2016 IPR004527 Glutamate-tRNA ligase, bacterial/mitochondrial GO:0000166|GO:0004818|GO:0005524|GO:0005737|GO:0006424 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188 RJP_RS04970 b4a25943d3df5e39b0bdb1f51ae8d9c3 1121 SMART SM00982 983 1082 2.1E-33 T 25-04-2016 IPR005118 Transcription-repair-coupling factor, C-terminal domain GO:0006281 RJP_RS04970 b4a25943d3df5e39b0bdb1f51ae8d9c3 1121 Hamap MF_00969 Transcription-repair-coupling factor [mfd]. 20 1080 25.814 T 25-04-2016 IPR004576 Transcription-repair coupling factor GO:0003684|GO:0005524|GO:0006281 RJP_RS04970 b4a25943d3df5e39b0bdb1f51ae8d9c3 1121 Pfam PF00271 Helicase conserved C-terminal domain 784 887 1.8E-17 T 25-04-2016 IPR001650 Helicase, C-terminal RJP_RS04970 b4a25943d3df5e39b0bdb1f51ae8d9c3 1121 SUPERFAMILY SSF143517 975 1106 3.01E-32 T 25-04-2016 RJP_RS04970 b4a25943d3df5e39b0bdb1f51ae8d9c3 1121 Pfam PF03461 TRCF domain 985 1074 2.6E-24 T 25-04-2016 IPR005118 Transcription-repair-coupling factor, C-terminal domain GO:0006281 RJP_RS04970 b4a25943d3df5e39b0bdb1f51ae8d9c3 1121 SUPERFAMILY SSF52540 14 331 8.18E-68 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RJP_RS04970 b4a25943d3df5e39b0bdb1f51ae8d9c3 1121 SMART SM00490 804 888 1.0E-19 T 25-04-2016 IPR001650 Helicase, C-terminal RJP_RS04970 b4a25943d3df5e39b0bdb1f51ae8d9c3 1121 SUPERFAMILY SSF141259 449 522 3.66E-19 T 25-04-2016 IPR003711 CarD-like/TRCF domain RJP_RS04970 b4a25943d3df5e39b0bdb1f51ae8d9c3 1121 TIGRFAM TIGR00580 mfd: transcription-repair coupling factor 133 1056 0.0 T 25-04-2016 IPR004576 Transcription-repair coupling factor GO:0003684|GO:0005524|GO:0006281 RJP_RS04970 b4a25943d3df5e39b0bdb1f51ae8d9c3 1121 Pfam PF00270 DEAD/DEAH box helicase 581 744 7.1E-19 T 25-04-2016 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 RJP_RS04970 b4a25943d3df5e39b0bdb1f51ae8d9c3 1121 Gene3D G3DSA:3.40.50.300 781 941 1.0E-31 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RJP_RS04970 b4a25943d3df5e39b0bdb1f51ae8d9c3 1121 PANTHER PTHR14025 369 1116 2.2E-277 T 25-04-2016 RJP_RS04970 b4a25943d3df5e39b0bdb1f51ae8d9c3 1121 PANTHER PTHR14025:SF21 369 1116 2.2E-277 T 25-04-2016 RJP_RS04970 b4a25943d3df5e39b0bdb1f51ae8d9c3 1121 Pfam PF02559 CarD-like/TRCF domain 457 548 1.2E-22 T 25-04-2016 IPR003711 CarD-like/TRCF domain RJP_RS04970 b4a25943d3df5e39b0bdb1f51ae8d9c3 1121 SMART SM00487 574 768 2.0E-36 T 25-04-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain RJP_RS04970 b4a25943d3df5e39b0bdb1f51ae8d9c3 1121 SUPERFAMILY SSF52540 513 761 2.04E-53 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RJP_RS04970 b4a25943d3df5e39b0bdb1f51ae8d9c3 1121 Gene3D G3DSA:3.30.2060.10 116 190 1.8E-6 T 25-04-2016 RJP_RS04970 b4a25943d3df5e39b0bdb1f51ae8d9c3 1121 Gene3D G3DSA:3.40.50.300 565 764 9.3E-49 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RJP_RS04970 b4a25943d3df5e39b0bdb1f51ae8d9c3 1121 SMART SM01058 456 550 4.3E-37 T 25-04-2016 IPR003711 CarD-like/TRCF domain RJP_RS04970 b4a25943d3df5e39b0bdb1f51ae8d9c3 1121 SUPERFAMILY SSF52540 760 968 1.05E-43 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RJP_RS05685 786fe26e8854476c367384802a9fb86f 361 TIGRFAM TIGR00430 Q_tRNA_tgt: tRNA-guanine transglycosylase 6 355 1.6E-150 T 25-04-2016 IPR004803 Queuine tRNA-ribosyltransferase GO:0008033|GO:0008479|GO:0008616 MetaCyc: PWY-6700|UniPathway: UPA00392 RJP_RS05685 786fe26e8854476c367384802a9fb86f 361 PANTHER PTHR21148 1 352 4.0E-153 T 25-04-2016 RJP_RS05685 786fe26e8854476c367384802a9fb86f 361 SUPERFAMILY SSF51713 3 355 9.81E-148 T 25-04-2016 IPR002616 tRNA-guanine(15) transglycosylase-like GO:0006400|GO:0008479|GO:0008616 MetaCyc: PWY-6700|UniPathway: UPA00392 RJP_RS05685 786fe26e8854476c367384802a9fb86f 361 PANTHER PTHR21148:SF26 1 352 4.0E-153 T 25-04-2016 RJP_RS05685 786fe26e8854476c367384802a9fb86f 361 Pfam PF01702 Queuine tRNA-ribosyltransferase 130 354 8.5E-78 T 25-04-2016 IPR002616 tRNA-guanine(15) transglycosylase-like GO:0006400|GO:0008479|GO:0008616 MetaCyc: PWY-6700|UniPathway: UPA00392 RJP_RS05685 786fe26e8854476c367384802a9fb86f 361 Gene3D G3DSA:3.20.20.105 3 355 5.1E-151 T 25-04-2016 IPR002616 tRNA-guanine(15) transglycosylase-like GO:0006400|GO:0008479|GO:0008616 MetaCyc: PWY-6700|UniPathway: UPA00392 RJP_RS05685 786fe26e8854476c367384802a9fb86f 361 TIGRFAM TIGR00449 tgt_general: tRNA-guanine family transglycosylase 6 358 4.4E-145 T 25-04-2016 IPR002616 tRNA-guanine(15) transglycosylase-like GO:0006400|GO:0008479|GO:0008616 MetaCyc: PWY-6700|UniPathway: UPA00392 RJP_RS05685 786fe26e8854476c367384802a9fb86f 361 Hamap MF_00168 Queuine tRNA-ribosyltransferase [tgt]. 4 361 56.597 T 25-04-2016 IPR004803 Queuine tRNA-ribosyltransferase GO:0008033|GO:0008479|GO:0008616 MetaCyc: PWY-6700|UniPathway: UPA00392 RJP_RS01795 94155bb090e78128dcd4228c637a37bd 321 SUPERFAMILY SSF56059 116 317 2.23E-40 T 25-04-2016 RJP_RS01795 94155bb090e78128dcd4228c637a37bd 321 SUPERFAMILY SSF52440 22 116 2.4E-29 T 25-04-2016 IPR016185 Pre-ATP-grasp domain RJP_RS01795 94155bb090e78128dcd4228c637a37bd 321 PANTHER PTHR23132 25 317 7.9E-63 T 25-04-2016 RJP_RS01795 94155bb090e78128dcd4228c637a37bd 321 Hamap MF_00047 D-alanine--D-alanine ligase [ddl]. 23 318 32.181 T 25-04-2016 IPR005905 D-alanine--D-alanine ligase GO:0005737|GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 RJP_RS01795 94155bb090e78128dcd4228c637a37bd 321 ProSitePatterns PS00843 D-alanine--D-alanine ligase signature 1. 83 94 - T 25-04-2016 IPR000291 D-alanine--D-alanine ligase/VANA/B/C, conserved site KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 RJP_RS01795 94155bb090e78128dcd4228c637a37bd 321 Gene3D G3DSA:3.30.470.20 191 317 2.9E-38 T 25-04-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 RJP_RS01795 94155bb090e78128dcd4228c637a37bd 321 Gene3D G3DSA:3.30.470.20 106 123 2.9E-38 T 25-04-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 RJP_RS01795 94155bb090e78128dcd4228c637a37bd 321 Gene3D G3DSA:3.30.1490.20 128 190 1.3E-9 T 25-04-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 RJP_RS01795 94155bb090e78128dcd4228c637a37bd 321 Pfam PF01820 D-ala D-ala ligase N-terminus 25 104 1.4E-18 T 25-04-2016 IPR011127 D-alanine--D-alanine ligase, N-terminal domain KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 RJP_RS01795 94155bb090e78128dcd4228c637a37bd 321 Pfam PF07478 D-ala D-ala ligase C-terminus 147 315 1.5E-40 T 25-04-2016 IPR011095 D-alanine--D-alanine ligase, C-terminal GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 RJP_RS01795 94155bb090e78128dcd4228c637a37bd 321 Gene3D G3DSA:3.40.50.20 22 104 1.2E-25 T 25-04-2016 IPR016185 Pre-ATP-grasp domain RJP_RS01795 94155bb090e78128dcd4228c637a37bd 321 ProSitePatterns PS00844 D-alanine--D-alanine ligase signature 2. 259 288 - T 25-04-2016 IPR000291 D-alanine--D-alanine ligase/VANA/B/C, conserved site KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 RJP_RS01795 94155bb090e78128dcd4228c637a37bd 321 TIGRFAM TIGR01205 D_ala_D_alaTIGR: D-alanine--D-alanine ligase 24 317 2.6E-95 T 25-04-2016 IPR005905 D-alanine--D-alanine ligase GO:0005737|GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 RJP_RS01895 16dba45f99b855f36a8cd4068c99d4a4 106 TIGRFAM TIGR01300 CPA3_mnhG_phaG: monovalent cation/proton antiporter, MnhG/PhaG subunit 10 99 8.1E-29 T 25-04-2016 IPR005133 Na+/H+ antiporter subunit G GO:0005451|GO:0015672|GO:0015992 RJP_RS01895 16dba45f99b855f36a8cd4068c99d4a4 106 PANTHER PTHR34703:SF1 1 94 1.3E-14 T 25-04-2016 RJP_RS01895 16dba45f99b855f36a8cd4068c99d4a4 106 PANTHER PTHR34703 1 94 1.3E-14 T 25-04-2016 RJP_RS01895 16dba45f99b855f36a8cd4068c99d4a4 106 Pfam PF03334 Na+/H+ antiporter subunit 10 88 7.3E-23 T 25-04-2016 IPR005133 Na+/H+ antiporter subunit G GO:0005451|GO:0015672|GO:0015992 RJP_RS01245 1dd853e744dff3e25e268e35d1343589 395 SUPERFAMILY SSF52777 165 394 8.9E-87 T 25-04-2016 RJP_RS01245 1dd853e744dff3e25e268e35d1343589 395 Gene3D G3DSA:2.40.50.100 1 95 6.6E-26 T 25-04-2016 RJP_RS01245 1dd853e744dff3e25e268e35d1343589 395 PANTHER PTHR23151:SF47 5 395 3.7E-204 T 25-04-2016 RJP_RS01245 1dd853e744dff3e25e268e35d1343589 395 SUPERFAMILY SSF47005 111 149 4.58E-10 T 25-04-2016 IPR004167 E3-binding domain GO:0008152|GO:0016746 RJP_RS01245 1dd853e744dff3e25e268e35d1343589 395 ProSitePatterns PS00189 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 27 56 - T 25-04-2016 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site RJP_RS01245 1dd853e744dff3e25e268e35d1343589 395 Pfam PF00364 Biotin-requiring enzyme 4 76 1.9E-17 T 25-04-2016 IPR000089 Biotin/lipoyl attachment RJP_RS01245 1dd853e744dff3e25e268e35d1343589 395 Gene3D G3DSA:3.30.559.10 160 393 9.9E-91 T 25-04-2016 IPR023213 Chloramphenicol acetyltransferase-like domain RJP_RS01245 1dd853e744dff3e25e268e35d1343589 395 Pfam PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) 165 393 6.0E-82 T 25-04-2016 IPR001078 2-oxoacid dehydrogenase acyltransferase, catalytic domain GO:0008152|GO:0016746 RJP_RS01245 1dd853e744dff3e25e268e35d1343589 395 TIGRFAM TIGR01347 sucB: dihydrolipoyllysine-residue succinyltransferase, E2 component of oxoglutarate dehydrogenase (succinyl-transferring) complex 4 394 2.5E-166 T 25-04-2016 IPR006255 Dihydrolipoamide succinyltransferase GO:0004149|GO:0006099|GO:0045252 KEGG: 00020+2.3.1.61|KEGG: 00310+2.3.1.61|MetaCyc: PWY-5084|UniPathway: UPA00868 RJP_RS01245 1dd853e744dff3e25e268e35d1343589 395 Gene3D G3DSA:4.10.320.10 112 155 9.9E-14 T 25-04-2016 IPR004167 E3-binding domain GO:0008152|GO:0016746 RJP_RS01245 1dd853e744dff3e25e268e35d1343589 395 Pfam PF02817 e3 binding domain 113 145 7.3E-12 T 25-04-2016 IPR004167 E3-binding domain GO:0008152|GO:0016746 RJP_RS01245 1dd853e744dff3e25e268e35d1343589 395 SUPERFAMILY SSF51230 1 92 3.27E-23 T 25-04-2016 IPR011053 Single hybrid motif RJP_RS01245 1dd853e744dff3e25e268e35d1343589 395 PANTHER PTHR23151 5 395 3.7E-204 T 25-04-2016 RJP_RS04590 5f8bef06d81f5690a1f4b74282846b9c 807 Pfam PF00986 DNA gyrase B subunit, carboxyl terminus 735 796 8.8E-27 T 25-04-2016 IPR002288 DNA gyrase B subunit, C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 RJP_RS04590 5f8bef06d81f5690a1f4b74282846b9c 807 PANTHER PTHR10169 4 563 2.3E-269 T 25-04-2016 RJP_RS04590 5f8bef06d81f5690a1f4b74282846b9c 807 PANTHER PTHR10169 724 807 2.3E-269 T 25-04-2016 RJP_RS04590 5f8bef06d81f5690a1f4b74282846b9c 807 Gene3D G3DSA:3.40.50.670 724 789 8.5E-90 T 25-04-2016 IPR013759 DNA topoisomerase, type IIA, central domain GO:0003677|GO:0003918|GO:0005524|GO:0006265 RJP_RS04590 5f8bef06d81f5690a1f4b74282846b9c 807 Gene3D G3DSA:3.40.50.670 415 560 8.5E-90 T 25-04-2016 IPR013759 DNA topoisomerase, type IIA, central domain GO:0003677|GO:0003918|GO:0005524|GO:0006265 RJP_RS04590 5f8bef06d81f5690a1f4b74282846b9c 807 Pfam PF01751 Toprim domain 430 541 2.4E-18 T 25-04-2016 IPR006171 Toprim domain RJP_RS04590 5f8bef06d81f5690a1f4b74282846b9c 807 SUPERFAMILY SSF55874 13 222 6.02E-70 T 25-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RJP_RS04590 5f8bef06d81f5690a1f4b74282846b9c 807 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 39 182 2.1E-25 T 25-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RJP_RS04590 5f8bef06d81f5690a1f4b74282846b9c 807 SMART SM00387 39 184 7.1E-29 T 25-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RJP_RS04590 5f8bef06d81f5690a1f4b74282846b9c 807 TIGRFAM TIGR01059 gyrB: DNA gyrase, B subunit 13 807 1.5E-302 T 25-04-2016 IPR011557 DNA gyrase, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 RJP_RS04590 5f8bef06d81f5690a1f4b74282846b9c 807 PRINTS PR00418 DNA topoisomerase II family signature 497 513 9.6E-72 T 25-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 RJP_RS04590 5f8bef06d81f5690a1f4b74282846b9c 807 PRINTS PR00418 DNA topoisomerase II family signature 431 445 9.6E-72 T 25-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 RJP_RS04590 5f8bef06d81f5690a1f4b74282846b9c 807 PRINTS PR00418 DNA topoisomerase II family signature 535 547 9.6E-72 T 25-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 RJP_RS04590 5f8bef06d81f5690a1f4b74282846b9c 807 PRINTS PR00418 DNA topoisomerase II family signature 279 292 9.6E-72 T 25-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 RJP_RS04590 5f8bef06d81f5690a1f4b74282846b9c 807 PRINTS PR00418 DNA topoisomerase II family signature 739 755 9.6E-72 T 25-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 RJP_RS04590 5f8bef06d81f5690a1f4b74282846b9c 807 PRINTS PR00418 DNA topoisomerase II family signature 515 532 9.6E-72 T 25-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 RJP_RS04590 5f8bef06d81f5690a1f4b74282846b9c 807 PRINTS PR00418 DNA topoisomerase II family signature 121 135 9.6E-72 T 25-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 RJP_RS04590 5f8bef06d81f5690a1f4b74282846b9c 807 PRINTS PR00418 DNA topoisomerase II family signature 78 91 9.6E-72 T 25-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 RJP_RS04590 5f8bef06d81f5690a1f4b74282846b9c 807 PRINTS PR00418 DNA topoisomerase II family signature 43 58 9.6E-72 T 25-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 RJP_RS04590 5f8bef06d81f5690a1f4b74282846b9c 807 Gene3D G3DSA:3.30.230.10 230 403 2.3E-67 T 25-04-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup RJP_RS04590 5f8bef06d81f5690a1f4b74282846b9c 807 Hamap MF_01898 DNA gyrase subunit B [gyrB]. 10 807 112.694 T 25-04-2016 IPR011557 DNA gyrase, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 RJP_RS04590 5f8bef06d81f5690a1f4b74282846b9c 807 PRINTS PR01159 DNA gyrase subunit B signature 481 490 1.1E-68 T 25-04-2016 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 RJP_RS04590 5f8bef06d81f5690a1f4b74282846b9c 807 PRINTS PR01159 DNA gyrase subunit B signature 323 339 1.1E-68 T 25-04-2016 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 RJP_RS04590 5f8bef06d81f5690a1f4b74282846b9c 807 PRINTS PR01159 DNA gyrase subunit B signature 371 385 1.1E-68 T 25-04-2016 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 RJP_RS04590 5f8bef06d81f5690a1f4b74282846b9c 807 PRINTS PR01159 DNA gyrase subunit B signature 13 23 1.1E-68 T 25-04-2016 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 RJP_RS04590 5f8bef06d81f5690a1f4b74282846b9c 807 PRINTS PR01159 DNA gyrase subunit B signature 204 217 1.1E-68 T 25-04-2016 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 RJP_RS04590 5f8bef06d81f5690a1f4b74282846b9c 807 PRINTS PR01159 DNA gyrase subunit B signature 189 204 1.1E-68 T 25-04-2016 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 RJP_RS04590 5f8bef06d81f5690a1f4b74282846b9c 807 PRINTS PR01159 DNA gyrase subunit B signature 760 772 1.1E-68 T 25-04-2016 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 RJP_RS04590 5f8bef06d81f5690a1f4b74282846b9c 807 PRINTS PR01159 DNA gyrase subunit B signature 253 271 1.1E-68 T 25-04-2016 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 RJP_RS04590 5f8bef06d81f5690a1f4b74282846b9c 807 PRINTS PR01159 DNA gyrase subunit B signature 776 792 1.1E-68 T 25-04-2016 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 RJP_RS04590 5f8bef06d81f5690a1f4b74282846b9c 807 PRINTS PR01159 DNA gyrase subunit B signature 230 252 1.1E-68 T 25-04-2016 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 RJP_RS04590 5f8bef06d81f5690a1f4b74282846b9c 807 PRINTS PR01159 DNA gyrase subunit B signature 385 405 1.1E-68 T 25-04-2016 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 RJP_RS04590 5f8bef06d81f5690a1f4b74282846b9c 807 SMART SM00433 43 800 2.1E-248 T 25-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 RJP_RS04590 5f8bef06d81f5690a1f4b74282846b9c 807 SUPERFAMILY SSF54211 231 402 6.07E-54 T 25-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold RJP_RS04590 5f8bef06d81f5690a1f4b74282846b9c 807 ProSitePatterns PS00177 DNA topoisomerase II signature. 433 441 - T 25-04-2016 IPR018522 DNA topoisomerase, type IIA, conserved site GO:0003677|GO:0003918|GO:0005524|GO:0006265 RJP_RS04590 5f8bef06d81f5690a1f4b74282846b9c 807 SUPERFAMILY SSF56719 405 570 8.11E-81 T 25-04-2016 IPR013760 DNA topoisomerase, type IIA-like domain GO:0003918|GO:0005524 RJP_RS04590 5f8bef06d81f5690a1f4b74282846b9c 807 SUPERFAMILY SSF56719 733 799 8.11E-81 T 25-04-2016 IPR013760 DNA topoisomerase, type IIA-like domain GO:0003918|GO:0005524 RJP_RS04590 5f8bef06d81f5690a1f4b74282846b9c 807 Pfam PF00204 DNA gyrase B 231 401 4.3E-56 T 25-04-2016 IPR013506 DNA topoisomerase, type IIA, subunit B, domain 2 GO:0003677|GO:0003918|GO:0005524|GO:0006265 RJP_RS04590 5f8bef06d81f5690a1f4b74282846b9c 807 Gene3D G3DSA:3.30.565.10 23 222 3.9E-86 T 25-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RJP_RS02310 d849b05ef5b1625c71f7d6af4a1f8adf 584 PANTHER PTHR24222 8 568 5.3E-208 T 25-04-2016 RJP_RS02310 d849b05ef5b1625c71f7d6af4a1f8adf 584 Pfam PF00005 ABC transporter 362 510 6.5E-31 T 25-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 RJP_RS02310 d849b05ef5b1625c71f7d6af4a1f8adf 584 SUPERFAMILY SSF90123 19 319 2.88E-34 T 25-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 RJP_RS02310 d849b05ef5b1625c71f7d6af4a1f8adf 584 TIGRFAM TIGR01842 type_I_sec_PrtD: type I secretion system ATPase 19 571 6.2E-249 T 25-04-2016 IPR010128 ATPase, type I secretion system, PrtD GO:0005524|GO:0008565|GO:0016021|GO:0030253|GO:0030256 RJP_RS02310 d849b05ef5b1625c71f7d6af4a1f8adf 584 SMART SM00382 371 558 3.6E-13 T 25-04-2016 IPR003593 AAA+ ATPase domain RJP_RS02310 d849b05ef5b1625c71f7d6af4a1f8adf 584 ProSitePatterns PS00211 ABC transporters family signature. 483 497 - T 25-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 RJP_RS02310 d849b05ef5b1625c71f7d6af4a1f8adf 584 Gene3D G3DSA:3.40.50.300 358 572 6.9E-61 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RJP_RS02310 d849b05ef5b1625c71f7d6af4a1f8adf 584 SUPERFAMILY SSF52540 326 571 1.74E-62 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RJP_RS02310 d849b05ef5b1625c71f7d6af4a1f8adf 584 Gene3D G3DSA:1.20.1560.10 20 319 4.1E-30 T 25-04-2016 RJP_RS02310 d849b05ef5b1625c71f7d6af4a1f8adf 584 PANTHER PTHR24222:SF0 8 568 5.3E-208 T 25-04-2016 IPR010128 ATPase, type I secretion system, PrtD GO:0005524|GO:0008565|GO:0016021|GO:0030253|GO:0030256 RJP_RS02310 d849b05ef5b1625c71f7d6af4a1f8adf 584 Pfam PF00664 ABC transporter transmembrane region 26 283 9.5E-10 T 25-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 RJP_RS01435 72f0b38b4abce24303619c151ee18613 905 Pfam PF00521 DNA gyrase/topoisomerase IV, subunit A 33 496 6.5E-156 T 25-04-2016 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 RJP_RS01435 72f0b38b4abce24303619c151ee18613 905 PANTHER PTHR10169:SF48 441 742 0.0 T 25-04-2016 RJP_RS01435 72f0b38b4abce24303619c151ee18613 905 Gene3D G3DSA:3.90.199.10 35 217 3.5E-84 T 25-04-2016 IPR013758 DNA topoisomerase, type IIA, subunit A/ C-terminal, alpha-beta GO:0003677|GO:0003918|GO:0005524|GO:0006259|GO:0006265 RJP_RS01435 72f0b38b4abce24303619c151ee18613 905 PANTHER PTHR10169:SF48 774 857 0.0 T 25-04-2016 RJP_RS01435 72f0b38b4abce24303619c151ee18613 905 Gene3D G3DSA:2.120.10.90 783 882 6.5E-116 T 25-04-2016 RJP_RS01435 72f0b38b4abce24303619c151ee18613 905 Gene3D G3DSA:2.120.10.90 522 734 6.5E-116 T 25-04-2016 RJP_RS01435 72f0b38b4abce24303619c151ee18613 905 Hamap MF_01897 DNA gyrase subunit A [gyrA]. 4 886 28.852 T 25-04-2016 IPR005743 DNA gyrase, subunit A GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 RJP_RS01435 72f0b38b4abce24303619c151ee18613 905 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 582 628 7.7E-5 T 25-04-2016 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal beta-pinwheel GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 RJP_RS01435 72f0b38b4abce24303619c151ee18613 905 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 530 572 1.6E-9 T 25-04-2016 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal beta-pinwheel GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 RJP_RS01435 72f0b38b4abce24303619c151ee18613 905 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 786 833 1.0E-10 T 25-04-2016 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal beta-pinwheel GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 RJP_RS01435 72f0b38b4abce24303619c151ee18613 905 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 639 682 9.4E-7 T 25-04-2016 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal beta-pinwheel GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 RJP_RS01435 72f0b38b4abce24303619c151ee18613 905 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 686 733 5.7E-12 T 25-04-2016 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal beta-pinwheel GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 RJP_RS01435 72f0b38b4abce24303619c151ee18613 905 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 836 882 1.5E-14 T 25-04-2016 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal beta-pinwheel GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 RJP_RS01435 72f0b38b4abce24303619c151ee18613 905 PANTHER PTHR10169:SF48 3 414 0.0 T 25-04-2016 RJP_RS01435 72f0b38b4abce24303619c151ee18613 905 TIGRFAM TIGR01063 gyrA: DNA gyrase, A subunit 9 883 0.0 T 25-04-2016 IPR005743 DNA gyrase, subunit A GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 RJP_RS01435 72f0b38b4abce24303619c151ee18613 905 PANTHER PTHR10169 774 857 0.0 T 25-04-2016 RJP_RS01435 72f0b38b4abce24303619c151ee18613 905 SUPERFAMILY SSF101904 524 735 5.23E-98 T 25-04-2016 RJP_RS01435 72f0b38b4abce24303619c151ee18613 905 SUPERFAMILY SSF101904 783 897 5.23E-98 T 25-04-2016 RJP_RS01435 72f0b38b4abce24303619c151ee18613 905 SUPERFAMILY SSF56719 31 512 1.7E-178 T 25-04-2016 IPR013760 DNA topoisomerase, type IIA-like domain GO:0003918|GO:0005524 RJP_RS01435 72f0b38b4abce24303619c151ee18613 905 Gene3D G3DSA:3.30.1360.40 237 332 8.3E-38 T 25-04-2016 IPR024946 Arginine repressor C-terminal-like domain RJP_RS01435 72f0b38b4abce24303619c151ee18613 905 PANTHER PTHR10169 3 414 0.0 T 25-04-2016 RJP_RS01435 72f0b38b4abce24303619c151ee18613 905 Gene3D G3DSA:1.10.268.10 363 487 1.8E-38 T 25-04-2016 IPR013757 Type IIA DNA topoisomerase subunit A, alpha-helical domain GO:0003677|GO:0003918|GO:0005524|GO:0006265 RJP_RS01435 72f0b38b4abce24303619c151ee18613 905 PANTHER PTHR10169 441 742 0.0 T 25-04-2016 RJP_RS01435 72f0b38b4abce24303619c151ee18613 905 SMART SM00434 12 490 3.3E-294 T 25-04-2016 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 RJP_RS02820 a86b13a874dc3d395e60432072375f03 189 ProSitePatterns PS00860 GTP cyclohydrolase I signature 2. 114 124 - T 25-04-2016 IPR018234 GTP cyclohydrolase I, conserved site GO:0003934|GO:0005737|GO:0046654 KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|UniPathway: UPA00848 RJP_RS02820 a86b13a874dc3d395e60432072375f03 189 Gene3D G3DSA:3.30.1130.10 69 187 4.1E-48 T 25-04-2016 RJP_RS02820 a86b13a874dc3d395e60432072375f03 189 TIGRFAM TIGR00063 folE: GTP cyclohydrolase I 11 185 1.6E-61 T 25-04-2016 IPR001474 GTP cyclohydrolase I GO:0003934|GO:0005737|GO:0046654 KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|UniPathway: UPA00848 RJP_RS02820 a86b13a874dc3d395e60432072375f03 189 Hamap MF_00223 GTP cyclohydrolase 1 [folE]. 5 187 35.943 T 25-04-2016 IPR001474 GTP cyclohydrolase I GO:0003934|GO:0005737|GO:0046654 KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|UniPathway: UPA00848 RJP_RS02820 a86b13a874dc3d395e60432072375f03 189 SUPERFAMILY SSF55620 3 186 5.78E-69 T 25-04-2016 RJP_RS02820 a86b13a874dc3d395e60432072375f03 189 PANTHER PTHR11109 6 185 4.8E-77 T 25-04-2016 IPR001474 GTP cyclohydrolase I GO:0003934|GO:0005737|GO:0046654 KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|UniPathway: UPA00848 RJP_RS02820 a86b13a874dc3d395e60432072375f03 189 Gene3D G3DSA:1.10.286.10 4 56 1.2E-22 T 25-04-2016 RJP_RS02820 a86b13a874dc3d395e60432072375f03 189 Pfam PF01227 GTP cyclohydrolase I 10 185 2.8E-66 T 25-04-2016 IPR020602 GTP cyclohydrolase I domain KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|UniPathway: UPA00848 RJP_RS02820 a86b13a874dc3d395e60432072375f03 189 ProSitePatterns PS00859 GTP cyclohydrolase I signature 1. 67 82 - T 25-04-2016 IPR018234 GTP cyclohydrolase I, conserved site GO:0003934|GO:0005737|GO:0046654 KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|UniPathway: UPA00848 RJP_RS06850 642a74f1f502a06ebe0fe78a99f2fc91 87 Pfam PF04221 RelB antitoxin 5 72 3.5E-23 T 25-04-2016 IPR007337 RelB antitoxin/Antitoxin DinJ RJP_RS06850 642a74f1f502a06ebe0fe78a99f2fc91 87 PANTHER PTHR38781:SF1 2 86 8.6E-17 T 25-04-2016 RJP_RS06850 642a74f1f502a06ebe0fe78a99f2fc91 87 PIRSF PIRSF003108 1 87 1.1E-28 T 25-04-2016 IPR026262 Antitoxin DinJ GO:0000986|GO:0015643|GO:0044010 RJP_RS06850 642a74f1f502a06ebe0fe78a99f2fc91 87 TIGRFAM TIGR02384 RelB_DinJ: addiction module antitoxin, RelB/DinJ family 1 83 3.7E-21 T 25-04-2016 IPR007337 RelB antitoxin/Antitoxin DinJ RJP_RS06850 642a74f1f502a06ebe0fe78a99f2fc91 87 PANTHER PTHR38781 2 86 8.6E-17 T 25-04-2016 RJP_RS01785 ef5ec110418eaf6893946a2d5f2ea120 485 Pfam PF08245 Mur ligase middle domain 118 304 4.3E-28 T 25-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 RJP_RS01785 ef5ec110418eaf6893946a2d5f2ea120 485 SUPERFAMILY SSF51984 14 100 1.23E-29 T 25-04-2016 RJP_RS01785 ef5ec110418eaf6893946a2d5f2ea120 485 TIGRFAM TIGR01082 murC: UDP-N-acetylmuramate--L-alanine ligase 16 470 2.9E-182 T 25-04-2016 IPR005758 UDP-N-acetylmuramate--L-alanine ligase GO:0008763|GO:0009252 KEGG: 00471+6.3.2.8|KEGG: 00550+6.3.2.8|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 RJP_RS01785 ef5ec110418eaf6893946a2d5f2ea120 485 Gene3D G3DSA:3.40.50.720 15 101 2.6E-36 T 25-04-2016 IPR016040 NAD(P)-binding domain RJP_RS01785 ef5ec110418eaf6893946a2d5f2ea120 485 Gene3D G3DSA:3.90.190.20 327 474 4.8E-49 T 25-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 RJP_RS01785 ef5ec110418eaf6893946a2d5f2ea120 485 PANTHER PTHR23135 8 464 6.3E-181 T 25-04-2016 RJP_RS01785 ef5ec110418eaf6893946a2d5f2ea120 485 Pfam PF01225 Mur ligase family, catalytic domain 15 112 5.9E-29 T 25-04-2016 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 UniPathway: UPA00219 RJP_RS01785 ef5ec110418eaf6893946a2d5f2ea120 485 SUPERFAMILY SSF53244 324 469 3.66E-43 T 25-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 RJP_RS01785 ef5ec110418eaf6893946a2d5f2ea120 485 PANTHER PTHR23135:SF5 8 464 6.3E-181 T 25-04-2016 RJP_RS01785 ef5ec110418eaf6893946a2d5f2ea120 485 Pfam PF02875 Mur ligase family, glutamate ligase domain 325 413 2.0E-20 T 25-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 RJP_RS01785 ef5ec110418eaf6893946a2d5f2ea120 485 Hamap MF_00046 UDP-N-acetylmuramate--L-alanine ligase [murC]. 13 476 41.878 T 25-04-2016 IPR005758 UDP-N-acetylmuramate--L-alanine ligase GO:0008763|GO:0009252 KEGG: 00471+6.3.2.8|KEGG: 00550+6.3.2.8|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 RJP_RS01785 ef5ec110418eaf6893946a2d5f2ea120 485 SUPERFAMILY SSF53623 99 323 2.62E-61 T 25-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 RJP_RS01785 ef5ec110418eaf6893946a2d5f2ea120 485 Gene3D G3DSA:3.40.1190.10 102 326 3.6E-68 T 25-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 RJP_RS03925 68c08bf3a61dab3fccf8b6fd99f48a6a 241 PANTHER PTHR10434 1 241 4.6E-52 T 25-04-2016 RJP_RS03925 68c08bf3a61dab3fccf8b6fd99f48a6a 241 PANTHER PTHR10434:SF11 1 241 4.6E-52 T 25-04-2016 RJP_RS03925 68c08bf3a61dab3fccf8b6fd99f48a6a 241 SUPERFAMILY SSF69593 13 234 6.15E-34 T 25-04-2016 RJP_RS03925 68c08bf3a61dab3fccf8b6fd99f48a6a 241 Pfam PF01553 Acyltransferase 62 185 6.4E-23 T 25-04-2016 IPR002123 Phospholipid/glycerol acyltransferase GO:0008152|GO:0016746 RJP_RS03925 68c08bf3a61dab3fccf8b6fd99f48a6a 241 SMART SM00563 75 188 2.0E-32 T 25-04-2016 IPR002123 Phospholipid/glycerol acyltransferase GO:0008152|GO:0016746 RJP_RS03925 68c08bf3a61dab3fccf8b6fd99f48a6a 241 Gene3D G3DSA:3.40.1130.10 67 221 8.7E-19 T 25-04-2016 RJP_RS05485 12b74c04e8e227c9735dbf03b741b3ae 428 Pfam PF02646 RmuC family 114 393 1.6E-45 T 25-04-2016 IPR003798 DNA recombination RmuC RJP_RS05485 12b74c04e8e227c9735dbf03b741b3ae 428 PANTHER PTHR30563 13 427 8.4E-17 T 25-04-2016 RJP_RS01780 91fd1acd4ceeaeb450c3a9f8cc136c7a 407 SUPERFAMILY SSF141868 170 399 9.15E-61 T 25-04-2016 IPR001633 EAL domain RJP_RS01780 91fd1acd4ceeaeb450c3a9f8cc136c7a 407 PANTHER PTHR33121 170 398 6.4E-48 T 25-04-2016 RJP_RS01780 91fd1acd4ceeaeb450c3a9f8cc136c7a 407 Pfam PF00563 EAL domain 172 398 8.9E-62 T 25-04-2016 IPR001633 EAL domain RJP_RS01780 91fd1acd4ceeaeb450c3a9f8cc136c7a 407 SMART SM00052 164 404 6.3E-44 T 25-04-2016 IPR001633 EAL domain RJP_RS01780 91fd1acd4ceeaeb450c3a9f8cc136c7a 407 Gene3D G3DSA:3.20.20.450 171 399 6.1E-60 T 25-04-2016 IPR001633 EAL domain RJP_RS01780 91fd1acd4ceeaeb450c3a9f8cc136c7a 407 PANTHER PTHR33121:SF10 170 398 6.4E-48 T 25-04-2016 RJP_RS01905 e2604fc9ba694d3a6711389502b56e48 215 Pfam PF03379 CcmB protein 6 197 1.9E-8 T 25-04-2016 IPR003544 Cytochrome c-type biogenesis protein CcmB GO:0015232|GO:0015886|GO:0016020|GO:0017004 RJP_RS03360 ab04e59c801b000e0d9d252377b0941a 288 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 155 175 1.7E-77 T 25-04-2016 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0003824|GO:0004488|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|UniPathway: UPA00193 RJP_RS03360 ab04e59c801b000e0d9d252377b0941a 288 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 33 55 1.7E-77 T 25-04-2016 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0003824|GO:0004488|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|UniPathway: UPA00193 RJP_RS03360 ab04e59c801b000e0d9d252377b0941a 288 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 204 233 1.7E-77 T 25-04-2016 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0003824|GO:0004488|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|UniPathway: UPA00193 RJP_RS03360 ab04e59c801b000e0d9d252377b0941a 288 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 109 130 1.7E-77 T 25-04-2016 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0003824|GO:0004488|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|UniPathway: UPA00193 RJP_RS03360 ab04e59c801b000e0d9d252377b0941a 288 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 239 255 1.7E-77 T 25-04-2016 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0003824|GO:0004488|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|UniPathway: UPA00193 RJP_RS03360 ab04e59c801b000e0d9d252377b0941a 288 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 256 274 1.7E-77 T 25-04-2016 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0003824|GO:0004488|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|UniPathway: UPA00193 RJP_RS03360 ab04e59c801b000e0d9d252377b0941a 288 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 74 101 1.7E-77 T 25-04-2016 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0003824|GO:0004488|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|UniPathway: UPA00193 RJP_RS03360 ab04e59c801b000e0d9d252377b0941a 288 SUPERFAMILY SSF53223 3 121 4.03E-36 T 25-04-2016 RJP_RS03360 ab04e59c801b000e0d9d252377b0941a 288 Gene3D G3DSA:3.40.50.720 140 264 4.9E-51 T 25-04-2016 IPR016040 NAD(P)-binding domain RJP_RS03360 ab04e59c801b000e0d9d252377b0941a 288 Gene3D G3DSA:3.40.192.10 6 139 2.7E-42 T 25-04-2016 RJP_RS03360 ab04e59c801b000e0d9d252377b0941a 288 Pfam PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain 123 281 7.4E-65 T 25-04-2016 IPR020631 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain GO:0003824|GO:0004488|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|UniPathway: UPA00193 RJP_RS03360 ab04e59c801b000e0d9d252377b0941a 288 Hamap MF_01576 Bifunctional protein FolD [folD]. 2 283 36.809 T 25-04-2016 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0003824|GO:0004488|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|UniPathway: UPA00193 RJP_RS03360 ab04e59c801b000e0d9d252377b0941a 288 Pfam PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain 4 120 9.2E-36 T 25-04-2016 IPR020630 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain GO:0003824|GO:0004488|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|UniPathway: UPA00193 RJP_RS03360 ab04e59c801b000e0d9d252377b0941a 288 ProSitePatterns PS00766 Tetrahydrofolate dehydrogenase/cyclohydrolase signature 1. 75 100 - T 25-04-2016 IPR020867 Tetrahydrofolate dehydrogenase/cyclohydrolase, conserved site GO:0003824|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|UniPathway: UPA00193 RJP_RS03360 ab04e59c801b000e0d9d252377b0941a 288 ProSitePatterns PS00767 Tetrahydrofolate dehydrogenase/cyclohydrolase signature 2. 260 268 - T 25-04-2016 IPR020867 Tetrahydrofolate dehydrogenase/cyclohydrolase, conserved site GO:0003824|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|UniPathway: UPA00193 RJP_RS03360 ab04e59c801b000e0d9d252377b0941a 288 SUPERFAMILY SSF51735 122 279 7.89E-46 T 25-04-2016 IPR016040 NAD(P)-binding domain RJP_RS03360 ab04e59c801b000e0d9d252377b0941a 288 PANTHER PTHR10025 4 280 2.9E-137 T 25-04-2016 RJP_RS00470 c7c37937620a7a0e02ff59f5f6ebe963 89 Pfam PF09992 Phosphodiester glycosidase 27 77 6.3E-7 T 25-04-2016 IPR018711 Phosphodiester glycosidase RJP_RS00675 53a7d91383b3539026904940c2fb7008 401 Pfam PF00155 Aminotransferase class I and II 32 392 8.5E-79 T 25-04-2016 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 RJP_RS00675 53a7d91383b3539026904940c2fb7008 401 PANTHER PTHR11751:SF306 15 397 2.9E-184 T 25-04-2016 RJP_RS00675 53a7d91383b3539026904940c2fb7008 401 ProSitePatterns PS00105 Aminotransferases class-I pyridoxal-phosphate attachment site. 236 249 - T 25-04-2016 IPR004838 Aminotransferases, class-I, pyridoxal-phosphate-binding site GO:0003824|GO:0009058|GO:0030170 Reactome: REACT_13 RJP_RS00675 53a7d91383b3539026904940c2fb7008 401 SUPERFAMILY SSF53383 1 396 9.55E-113 T 25-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase RJP_RS00675 53a7d91383b3539026904940c2fb7008 401 PANTHER PTHR11751 15 397 2.9E-184 T 25-04-2016 RJP_RS00675 53a7d91383b3539026904940c2fb7008 401 Gene3D G3DSA:3.40.640.10 45 275 5.8E-72 T 25-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 RJP_RS00675 53a7d91383b3539026904940c2fb7008 401 Gene3D G3DSA:3.90.1150.10 276 396 1.4E-45 T 25-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 RJP_RS00675 53a7d91383b3539026904940c2fb7008 401 PRINTS PR00753 1-aminocyclopropane-1-carboxylate synthase signature 115 136 2.1E-11 T 25-04-2016 RJP_RS00675 53a7d91383b3539026904940c2fb7008 401 PRINTS PR00753 1-aminocyclopropane-1-carboxylate synthase signature 199 222 2.1E-11 T 25-04-2016 RJP_RS00675 53a7d91383b3539026904940c2fb7008 401 PRINTS PR00753 1-aminocyclopropane-1-carboxylate synthase signature 230 254 2.1E-11 T 25-04-2016 RJP_RS00675 53a7d91383b3539026904940c2fb7008 401 PRINTS PR00753 1-aminocyclopropane-1-carboxylate synthase signature 162 186 2.1E-11 T 25-04-2016 RJP_RS00935 9e851ea945204ec0fbc55f14971d56de 218 Gene3D G3DSA:1.10.3720.10 15 215 3.5E-43 T 25-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RJP_RS00935 9e851ea945204ec0fbc55f14971d56de 218 PANTHER PTHR30614:SF15 14 218 4.6E-80 T 25-04-2016 RJP_RS00935 9e851ea945204ec0fbc55f14971d56de 218 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 13 110 1.5E-27 T 25-04-2016 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0005215|GO:0006810|GO:0016021 RJP_RS00935 9e851ea945204ec0fbc55f14971d56de 218 SUPERFAMILY SSF161098 15 201 7.59E-40 T 25-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RJP_RS00935 9e851ea945204ec0fbc55f14971d56de 218 PANTHER PTHR30614 14 218 4.6E-80 T 25-04-2016 RJP_RS00935 9e851ea945204ec0fbc55f14971d56de 218 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 33 215 6.3E-25 T 25-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RJP_RS00990 4777a2bca43ae670f5f17891f3dbc834 1373 Pfam PF00562 RNA polymerase Rpb2, domain 6 736 1292 1.8E-159 T 25-04-2016 IPR007120 DNA-directed RNA polymerase, subunit 2, domain 6 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 RJP_RS00990 4777a2bca43ae670f5f17891f3dbc834 1373 Gene3D G3DSA:2.40.270.10 1090 1271 2.0E-82 T 25-04-2016 IPR007120 DNA-directed RNA polymerase, subunit 2, domain 6 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 RJP_RS00990 4777a2bca43ae670f5f17891f3dbc834 1373 Gene3D G3DSA:2.40.270.10 810 837 2.0E-82 T 25-04-2016 IPR007120 DNA-directed RNA polymerase, subunit 2, domain 6 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 RJP_RS00990 4777a2bca43ae670f5f17891f3dbc834 1373 Gene3D G3DSA:3.90.1110.10 363 461 2.8E-65 T 25-04-2016 IPR007642 RNA polymerase Rpb2, domain 2 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 RJP_RS00990 4777a2bca43ae670f5f17891f3dbc834 1373 Gene3D G3DSA:3.90.1110.10 168 245 2.8E-65 T 25-04-2016 IPR007642 RNA polymerase Rpb2, domain 2 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 RJP_RS00990 4777a2bca43ae670f5f17891f3dbc834 1373 Pfam PF04563 RNA polymerase beta subunit 34 515 1.2E-31 T 25-04-2016 IPR007644 RNA polymerase, beta subunit, protrusion GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 RJP_RS00990 4777a2bca43ae670f5f17891f3dbc834 1373 Gene3D G3DSA:2.40.50.100 734 809 2.3E-29 T 25-04-2016 RJP_RS00990 4777a2bca43ae670f5f17891f3dbc834 1373 Gene3D G3DSA:3.90.1100.10 29 166 7.7E-148 T 25-04-2016 RJP_RS00990 4777a2bca43ae670f5f17891f3dbc834 1373 Gene3D G3DSA:3.90.1100.10 677 731 7.7E-148 T 25-04-2016 RJP_RS00990 4777a2bca43ae670f5f17891f3dbc834 1373 Gene3D G3DSA:3.90.1100.10 462 608 7.7E-148 T 25-04-2016 RJP_RS00990 4777a2bca43ae670f5f17891f3dbc834 1373 Pfam PF04561 RNA polymerase Rpb2, domain 2 370 471 5.1E-19 T 25-04-2016 IPR007642 RNA polymerase Rpb2, domain 2 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 RJP_RS00990 4777a2bca43ae670f5f17891f3dbc834 1373 Hamap MF_01321 DNA-directed RNA polymerase subunit beta [rpoB]. 21 1371 12.134 T 25-04-2016 IPR010243 DNA-directed RNA polymerase, beta subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 RJP_RS00990 4777a2bca43ae670f5f17891f3dbc834 1373 Pfam PF10385 RNA polymerase beta subunit external 1 domain 608 673 1.1E-19 T 25-04-2016 IPR019462 DNA-directed RNA polymerase, beta subunit, external 1 domain GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 RJP_RS00990 4777a2bca43ae670f5f17891f3dbc834 1373 Pfam PF04560 RNA polymerase Rpb2, domain 7 1295 1369 1.3E-25 T 25-04-2016 IPR007641 RNA polymerase Rpb2, domain 7 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 RJP_RS00990 4777a2bca43ae670f5f17891f3dbc834 1373 TIGRFAM TIGR02013 rpoB: DNA-directed RNA polymerase, beta subunit 18 1368 0.0 T 25-04-2016 IPR010243 DNA-directed RNA polymerase, beta subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 RJP_RS00990 4777a2bca43ae670f5f17891f3dbc834 1373 PANTHER PTHR20856 1063 1158 0.0 T 25-04-2016 IPR015712 DNA-directed RNA polymerase, subunit 2 GO:0003899|GO:0006351|GO:0032549 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 RJP_RS00990 4777a2bca43ae670f5f17891f3dbc834 1373 PANTHER PTHR20856 760 947 0.0 T 25-04-2016 IPR015712 DNA-directed RNA polymerase, subunit 2 GO:0003899|GO:0006351|GO:0032549 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 RJP_RS00990 4777a2bca43ae670f5f17891f3dbc834 1373 PANTHER PTHR20856 1211 1373 0.0 T 25-04-2016 IPR015712 DNA-directed RNA polymerase, subunit 2 GO:0003899|GO:0006351|GO:0032549 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 RJP_RS00990 4777a2bca43ae670f5f17891f3dbc834 1373 PANTHER PTHR20856 357 743 0.0 T 25-04-2016 IPR015712 DNA-directed RNA polymerase, subunit 2 GO:0003899|GO:0006351|GO:0032549 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 RJP_RS00990 4777a2bca43ae670f5f17891f3dbc834 1373 PANTHER PTHR20856 2 246 0.0 T 25-04-2016 IPR015712 DNA-directed RNA polymerase, subunit 2 GO:0003899|GO:0006351|GO:0032549 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 RJP_RS00990 4777a2bca43ae670f5f17891f3dbc834 1373 Gene3D G3DSA:2.40.50.150 1075 1089 1.5E-54 T 25-04-2016 IPR014724 RNA polymerase Rpb2, OB-fold GO:0003899 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 RJP_RS00990 4777a2bca43ae670f5f17891f3dbc834 1373 Gene3D G3DSA:2.40.50.150 844 954 1.5E-54 T 25-04-2016 IPR014724 RNA polymerase Rpb2, OB-fold GO:0003899 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 RJP_RS00990 4777a2bca43ae670f5f17891f3dbc834 1373 Gene3D G3DSA:2.30.150.10 609 673 8.6E-23 T 25-04-2016 IPR019462 DNA-directed RNA polymerase, beta subunit, external 1 domain GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 RJP_RS00990 4777a2bca43ae670f5f17891f3dbc834 1373 ProSitePatterns PS01166 RNA polymerases beta chain signature. 1093 1105 - T 25-04-2016 IPR007121 RNA polymerase, beta subunit, conserved site GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 RJP_RS00990 4777a2bca43ae670f5f17891f3dbc834 1373 SUPERFAMILY SSF64484 20 241 0.0 T 25-04-2016 RJP_RS00990 4777a2bca43ae670f5f17891f3dbc834 1373 SUPERFAMILY SSF64484 360 956 0.0 T 25-04-2016 RJP_RS00990 4777a2bca43ae670f5f17891f3dbc834 1373 SUPERFAMILY SSF64484 1069 1371 0.0 T 25-04-2016 RJP_RS00990 4777a2bca43ae670f5f17891f3dbc834 1373 Pfam PF04565 RNA polymerase Rpb2, domain 3 530 598 2.9E-32 T 25-04-2016 IPR007645 RNA polymerase Rpb2, domain 3 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 RJP_RS00990 4777a2bca43ae670f5f17891f3dbc834 1373 PANTHER PTHR20856:SF20 1063 1158 0.0 T 25-04-2016 RJP_RS00990 4777a2bca43ae670f5f17891f3dbc834 1373 PANTHER PTHR20856:SF20 760 947 0.0 T 25-04-2016 RJP_RS00990 4777a2bca43ae670f5f17891f3dbc834 1373 PANTHER PTHR20856:SF20 1211 1373 0.0 T 25-04-2016 RJP_RS00990 4777a2bca43ae670f5f17891f3dbc834 1373 PANTHER PTHR20856:SF20 357 743 0.0 T 25-04-2016 RJP_RS00990 4777a2bca43ae670f5f17891f3dbc834 1373 PANTHER PTHR20856:SF20 2 246 0.0 T 25-04-2016 RJP_RS02335 72ae03bdccbf06632e03057c4b2fe113 450 Hamap MF_00249 ATP-dependent protease ATPase subunit HslU [hslU]. 12 450 41.303 T 25-04-2016 IPR004491 Heat shock protein HslU GO:0005524|GO:0005737|GO:0009376|GO:0016887|GO:0070011 RJP_RS02335 72ae03bdccbf06632e03057c4b2fe113 450 PANTHER PTHR11262:SF3 223 450 3.2E-189 T 25-04-2016 IPR004491 Heat shock protein HslU GO:0005524|GO:0005737|GO:0009376|GO:0016887|GO:0070011 RJP_RS02335 72ae03bdccbf06632e03057c4b2fe113 450 PANTHER PTHR11262:SF3 15 116 3.2E-189 T 25-04-2016 IPR004491 Heat shock protein HslU GO:0005524|GO:0005737|GO:0009376|GO:0016887|GO:0070011 RJP_RS02335 72ae03bdccbf06632e03057c4b2fe113 450 TIGRFAM TIGR00390 hslU: ATP-dependent protease HslVU, ATPase subunit 15 450 1.5E-175 T 25-04-2016 IPR004491 Heat shock protein HslU GO:0005524|GO:0005737|GO:0009376|GO:0016887|GO:0070011 RJP_RS02335 72ae03bdccbf06632e03057c4b2fe113 450 PANTHER PTHR11262 223 450 3.2E-189 T 25-04-2016 RJP_RS02335 72ae03bdccbf06632e03057c4b2fe113 450 PANTHER PTHR11262 15 116 3.2E-189 T 25-04-2016 RJP_RS02335 72ae03bdccbf06632e03057c4b2fe113 450 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 342 412 4.6E-5 T 25-04-2016 IPR019489 Clp ATPase, C-terminal RJP_RS02335 72ae03bdccbf06632e03057c4b2fe113 450 Gene3D G3DSA:1.10.8.10 218 248 3.9E-24 T 25-04-2016 RJP_RS02335 72ae03bdccbf06632e03057c4b2fe113 450 Gene3D G3DSA:1.10.8.10 126 177 3.9E-24 T 25-04-2016 RJP_RS02335 72ae03bdccbf06632e03057c4b2fe113 450 SMART SM01086 342 438 2.4E-18 T 25-04-2016 IPR019489 Clp ATPase, C-terminal RJP_RS02335 72ae03bdccbf06632e03057c4b2fe113 450 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 64 112 2.9E-5 T 25-04-2016 IPR003959 ATPase, AAA-type, core GO:0005524 RJP_RS02335 72ae03bdccbf06632e03057c4b2fe113 450 Pfam PF07724 AAA domain (Cdc48 subfamily) 174 336 2.2E-39 T 25-04-2016 IPR003959 ATPase, AAA-type, core GO:0005524 RJP_RS02335 72ae03bdccbf06632e03057c4b2fe113 450 Gene3D G3DSA:3.40.50.300 251 338 5.0E-47 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RJP_RS02335 72ae03bdccbf06632e03057c4b2fe113 450 Gene3D G3DSA:3.40.50.300 16 121 5.0E-47 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RJP_RS02335 72ae03bdccbf06632e03057c4b2fe113 450 SMART SM00382 60 339 7.6E-12 T 25-04-2016 IPR003593 AAA+ ATPase domain RJP_RS02335 72ae03bdccbf06632e03057c4b2fe113 450 SUPERFAMILY SSF52540 16 445 2.64E-80 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RJP_RS02335 72ae03bdccbf06632e03057c4b2fe113 450 Gene3D G3DSA:1.10.8.60 341 450 9.1E-34 T 25-04-2016 RJP_RS00515 05c04efb370046eaf68f8cb746687a80 555 PANTHER PTHR19211 4 554 1.6E-303 T 25-04-2016 RJP_RS00515 05c04efb370046eaf68f8cb746687a80 555 TIGRFAM TIGR03719 ABC_ABC_ChvD: ATP-binding cassette protein, ChvD family 4 554 5.0E-277 T 25-04-2016 IPR022374 ABC transporter, ATP-binding protein, ChvD RJP_RS00515 05c04efb370046eaf68f8cb746687a80 555 SUPERFAMILY SSF52540 303 518 3.28E-45 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RJP_RS00515 05c04efb370046eaf68f8cb746687a80 555 Pfam PF12848 ABC transporter 232 304 2.8E-9 T 25-04-2016 IPR032781 ABC-transporter extension domain RJP_RS00515 05c04efb370046eaf68f8cb746687a80 555 SUPERFAMILY SSF52540 9 242 3.25E-49 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RJP_RS00515 05c04efb370046eaf68f8cb746687a80 555 ProSitePatterns PS00211 ABC transporters family signature. 165 179 - T 25-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 RJP_RS00515 05c04efb370046eaf68f8cb746687a80 555 PANTHER PTHR19211:SF7 4 554 1.6E-303 T 25-04-2016 RJP_RS00515 05c04efb370046eaf68f8cb746687a80 555 Gene3D G3DSA:3.40.50.300 325 534 9.3E-46 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RJP_RS00515 05c04efb370046eaf68f8cb746687a80 555 Gene3D G3DSA:3.40.50.300 278 303 1.4E-5 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RJP_RS00515 05c04efb370046eaf68f8cb746687a80 555 Pfam PF00005 ABC transporter 22 193 6.7E-25 T 25-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 RJP_RS00515 05c04efb370046eaf68f8cb746687a80 555 Pfam PF00005 ABC transporter 341 475 4.8E-25 T 25-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 RJP_RS00515 05c04efb370046eaf68f8cb746687a80 555 Gene3D G3DSA:3.40.50.300 9 277 2.4E-50 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RJP_RS00515 05c04efb370046eaf68f8cb746687a80 555 SMART SM00382 350 523 8.0E-10 T 25-04-2016 IPR003593 AAA+ ATPase domain RJP_RS00515 05c04efb370046eaf68f8cb746687a80 555 SMART SM00382 31 238 2.9E-8 T 25-04-2016 IPR003593 AAA+ ATPase domain RJP_RS06250 82dabc7fbc90e729770cb7acfff1bf4e 104 Hamap MF_01456 NAD(P)H-quinone oxidoreductase subunit 4L, chloroplastic [ndhE]. 5 104 18.982 T 25-04-2016 IPR001133 NADH-ubiquinone oxidoreductase chain 4L/K GO:0016651|GO:0042773|GO:0055114 RJP_RS06250 82dabc7fbc90e729770cb7acfff1bf4e 104 PANTHER PTHR11434 6 102 4.0E-38 T 25-04-2016 IPR001133 NADH-ubiquinone oxidoreductase chain 4L/K GO:0016651|GO:0042773|GO:0055114 RJP_RS06250 82dabc7fbc90e729770cb7acfff1bf4e 104 Pfam PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L 10 99 1.5E-23 T 25-04-2016 IPR001133 NADH-ubiquinone oxidoreductase chain 4L/K GO:0016651|GO:0042773|GO:0055114 RJP_RS00110 5d7df2f0d0a99385cce6a3bd87e56637 436 Gene3D G3DSA:1.10.3090.10 201 405 1.8E-36 T 25-04-2016 RJP_RS00110 5d7df2f0d0a99385cce6a3bd87e56637 436 PANTHER PTHR13734 90 336 1.8E-55 T 25-04-2016 RJP_RS00110 5d7df2f0d0a99385cce6a3bd87e56637 436 PANTHER PTHR13734 15 40 1.8E-55 T 25-04-2016 RJP_RS00110 5d7df2f0d0a99385cce6a3bd87e56637 436 TIGRFAM TIGR01045 RPE1: rickettsial palindromic element RPE1 domain 41 88 1.1E-23 T 25-04-2016 IPR005728 Rickettsial palindromic element RJP_RS00110 5d7df2f0d0a99385cce6a3bd87e56637 436 Gene3D G3DSA:3.30.460.10 92 196 8.6E-45 T 25-04-2016 RJP_RS00110 5d7df2f0d0a99385cce6a3bd87e56637 436 Gene3D G3DSA:3.30.460.10 9 42 8.6E-45 T 25-04-2016 RJP_RS00110 5d7df2f0d0a99385cce6a3bd87e56637 436 SUPERFAMILY SSF81301 90 196 8.94E-29 T 25-04-2016 RJP_RS00110 5d7df2f0d0a99385cce6a3bd87e56637 436 Pfam PF12627 Probable RNA and SrmB- binding site of polymerase A 230 285 1.0E-9 T 25-04-2016 IPR032828 tRNA nucleotidyltransferase/poly(A) polymerase, RNA and SrmB- binding domain RJP_RS00110 5d7df2f0d0a99385cce6a3bd87e56637 436 Pfam PF01743 Poly A polymerase head domain 89 199 2.0E-25 T 25-04-2016 IPR002646 Poly A polymerase, head domain GO:0003723|GO:0006396|GO:0016779 RJP_RS00110 5d7df2f0d0a99385cce6a3bd87e56637 436 SUPERFAMILY SSF81891 201 434 2.35E-42 T 25-04-2016 RJP_RS04140 33ebd4758a6e2dc81732b987f55a6b56 330 SMART SM01004 2 324 1.8E-209 T 25-04-2016 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 RJP_RS04140 33ebd4758a6e2dc81732b987f55a6b56 330 PANTHER PTHR11458 1 330 1.2E-164 T 25-04-2016 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 RJP_RS04140 33ebd4758a6e2dc81732b987f55a6b56 330 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 152 171 1.011295E-53 T 25-04-2016 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 RJP_RS04140 33ebd4758a6e2dc81732b987f55a6b56 330 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 243 259 1.011295E-53 T 25-04-2016 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 RJP_RS04140 33ebd4758a6e2dc81732b987f55a6b56 330 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 298 317 1.011295E-53 T 25-04-2016 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 RJP_RS04140 33ebd4758a6e2dc81732b987f55a6b56 330 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 268 283 1.011295E-53 T 25-04-2016 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 RJP_RS04140 33ebd4758a6e2dc81732b987f55a6b56 330 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 190 209 1.011295E-53 T 25-04-2016 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 RJP_RS04140 33ebd4758a6e2dc81732b987f55a6b56 330 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 122 136 1.011295E-53 T 25-04-2016 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 RJP_RS04140 33ebd4758a6e2dc81732b987f55a6b56 330 Gene3D G3DSA:3.20.20.70 2 327 2.9E-139 T 25-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 RJP_RS04140 33ebd4758a6e2dc81732b987f55a6b56 330 SUPERFAMILY SSF51569 2 326 1.61E-131 T 25-04-2016 RJP_RS04140 33ebd4758a6e2dc81732b987f55a6b56 330 PIRSF PIRSF001415 1 327 7.2E-145 T 25-04-2016 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 RJP_RS04140 33ebd4758a6e2dc81732b987f55a6b56 330 Pfam PF00490 Delta-aminolevulinic acid dehydratase 5 322 2.3E-132 T 25-04-2016 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 RJP_RS05445 575bd0faa52ae65bcebc73f7ea900bcf 508 TIGRFAM TIGR00398 metG: methionine--tRNA ligase 151 506 1.1E-104 T 25-04-2016 IPR014758 Methionyl-tRNA synthetase GO:0000166|GO:0004825|GO:0005524|GO:0005737|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10|Reactome: REACT_71 RJP_RS05445 575bd0faa52ae65bcebc73f7ea900bcf 508 PRINTS PR01041 Methionyl-tRNA synthetase signature 87 98 8.9E-34 T 25-04-2016 IPR014758 Methionyl-tRNA synthetase GO:0000166|GO:0004825|GO:0005524|GO:0005737|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10|Reactome: REACT_71 RJP_RS05445 575bd0faa52ae65bcebc73f7ea900bcf 508 PRINTS PR01041 Methionyl-tRNA synthetase signature 7 20 8.9E-34 T 25-04-2016 IPR014758 Methionyl-tRNA synthetase GO:0000166|GO:0004825|GO:0005524|GO:0005737|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10|Reactome: REACT_71 RJP_RS05445 575bd0faa52ae65bcebc73f7ea900bcf 508 PRINTS PR01041 Methionyl-tRNA synthetase signature 222 233 8.9E-34 T 25-04-2016 IPR014758 Methionyl-tRNA synthetase GO:0000166|GO:0004825|GO:0005524|GO:0005737|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10|Reactome: REACT_71 RJP_RS05445 575bd0faa52ae65bcebc73f7ea900bcf 508 PRINTS PR01041 Methionyl-tRNA synthetase signature 254 269 8.9E-34 T 25-04-2016 IPR014758 Methionyl-tRNA synthetase GO:0000166|GO:0004825|GO:0005524|GO:0005737|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10|Reactome: REACT_71 RJP_RS05445 575bd0faa52ae65bcebc73f7ea900bcf 508 PRINTS PR01041 Methionyl-tRNA synthetase signature 39 53 8.9E-34 T 25-04-2016 IPR014758 Methionyl-tRNA synthetase GO:0000166|GO:0004825|GO:0005524|GO:0005737|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10|Reactome: REACT_71 RJP_RS05445 575bd0faa52ae65bcebc73f7ea900bcf 508 PRINTS PR01041 Methionyl-tRNA synthetase signature 346 357 8.9E-34 T 25-04-2016 IPR014758 Methionyl-tRNA synthetase GO:0000166|GO:0004825|GO:0005524|GO:0005737|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10|Reactome: REACT_71 RJP_RS05445 575bd0faa52ae65bcebc73f7ea900bcf 508 PANTHER PTHR11946:SF1 2 508 3.2E-244 T 25-04-2016 RJP_RS05445 575bd0faa52ae65bcebc73f7ea900bcf 508 Pfam PF08264 Anticodon-binding domain of tRNA 386 474 7.7E-6 T 25-04-2016 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding GO:0000166|GO:0006418 Reactome: REACT_71 RJP_RS05445 575bd0faa52ae65bcebc73f7ea900bcf 508 SUPERFAMILY SSF47323 347 506 4.11E-37 T 25-04-2016 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 RJP_RS05445 575bd0faa52ae65bcebc73f7ea900bcf 508 Pfam PF09334 tRNA synthetases class I (M) 5 139 3.3E-44 T 25-04-2016 IPR015413 Methionyl/Leucyl tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 RJP_RS05445 575bd0faa52ae65bcebc73f7ea900bcf 508 Pfam PF09334 tRNA synthetases class I (M) 150 358 7.8E-66 T 25-04-2016 IPR015413 Methionyl/Leucyl tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 RJP_RS05445 575bd0faa52ae65bcebc73f7ea900bcf 508 Gene3D G3DSA:2.170.220.10 117 223 3.9E-44 T 25-04-2016 RJP_RS05445 575bd0faa52ae65bcebc73f7ea900bcf 508 Gene3D G3DSA:1.10.730.10 338 507 3.7E-45 T 25-04-2016 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 RJP_RS05445 575bd0faa52ae65bcebc73f7ea900bcf 508 SUPERFAMILY SSF52374 2 345 2.57E-108 T 25-04-2016 RJP_RS05445 575bd0faa52ae65bcebc73f7ea900bcf 508 Gene3D G3DSA:3.40.50.620 224 334 4.4E-74 T 25-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold RJP_RS05445 575bd0faa52ae65bcebc73f7ea900bcf 508 Gene3D G3DSA:3.40.50.620 3 113 4.4E-74 T 25-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold RJP_RS05445 575bd0faa52ae65bcebc73f7ea900bcf 508 PANTHER PTHR11946 2 508 3.2E-244 T 25-04-2016 RJP_RS05445 575bd0faa52ae65bcebc73f7ea900bcf 508 Hamap MF_01228 Methionine--tRNA ligase [metG]. 1 506 47.969 T 25-04-2016 IPR023457 Methionine-tRNA synthetase, type 2 GO:0004825 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 RJP_RS02445 896a92c2883d99a484e4de41463d1205 154 SMART SM00732 17 117 5.0E-27 T 25-04-2016 IPR006641 YqgF/RNase H-like domain GO:0006139 RJP_RS02445 896a92c2883d99a484e4de41463d1205 154 PANTHER PTHR33317 19 154 1.3E-33 T 25-04-2016 RJP_RS02445 896a92c2883d99a484e4de41463d1205 154 Pfam PF03652 Holliday junction resolvase 19 150 2.2E-38 T 25-04-2016 IPR005227 Putative pre-16S rRNA nuclease GO:0006364 RJP_RS02445 896a92c2883d99a484e4de41463d1205 154 Hamap MF_00651 Putative pre-16S rRNA nuclease [yqgF]. 17 152 22.662 T 25-04-2016 IPR005227 Putative pre-16S rRNA nuclease GO:0006364 RJP_RS02445 896a92c2883d99a484e4de41463d1205 154 Gene3D G3DSA:3.30.420.140 19 152 6.8E-41 T 25-04-2016 IPR006641 YqgF/RNase H-like domain GO:0006139 RJP_RS02445 896a92c2883d99a484e4de41463d1205 154 TIGRFAM TIGR00250 RNAse_H_YqgF: putative transcription antitermination factor YqgF 21 149 5.8E-27 T 25-04-2016 IPR005227 Putative pre-16S rRNA nuclease GO:0006364 RJP_RS02445 896a92c2883d99a484e4de41463d1205 154 PANTHER PTHR33317:SF1 19 154 1.3E-33 T 25-04-2016 RJP_RS02445 896a92c2883d99a484e4de41463d1205 154 SUPERFAMILY SSF53098 19 152 1.52E-35 T 25-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 RJP_RS00205 6a9d4feab3aa35a474cf82515f38f229 534 PANTHER PTHR10108 27 157 1.2E-22 T 25-04-2016 RJP_RS00205 6a9d4feab3aa35a474cf82515f38f229 534 PANTHER PTHR10108 463 474 1.2E-22 T 25-04-2016 RJP_RS00205 6a9d4feab3aa35a474cf82515f38f229 534 PANTHER PTHR10108:SF829 27 157 1.2E-22 T 25-04-2016 RJP_RS00205 6a9d4feab3aa35a474cf82515f38f229 534 PANTHER PTHR10108:SF829 463 474 1.2E-22 T 25-04-2016 RJP_RS00205 6a9d4feab3aa35a474cf82515f38f229 534 Pfam PF10119 Predicted methyltransferase regulatory domain 217 298 1.3E-24 T 25-04-2016 IPR018773 Methyltransferase regulatory domain, predicted RJP_RS00205 6a9d4feab3aa35a474cf82515f38f229 534 Gene3D G3DSA:3.40.50.150 17 162 7.3E-29 T 25-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RJP_RS00205 6a9d4feab3aa35a474cf82515f38f229 534 Pfam PF13847 Methyltransferase domain 45 152 6.1E-17 T 25-04-2016 IPR025714 Methyltransferase domain RJP_RS00205 6a9d4feab3aa35a474cf82515f38f229 534 SUPERFAMILY SSF53335 12 182 7.99E-29 T 25-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RJP_RS06440 2ebd17186e9df9a32e830ac1b807451e 71 PANTHER PTHR33370 1 71 2.9E-40 T 25-04-2016 RJP_RS06440 2ebd17186e9df9a32e830ac1b807451e 71 Gene3D G3DSA:2.40.50.140 1 71 2.7E-36 T 25-04-2016 IPR012340 Nucleic acid-binding, OB-fold RJP_RS06440 2ebd17186e9df9a32e830ac1b807451e 71 TIGRFAM TIGR00008 infA: translation initiation factor IF-1 3 71 3.3E-33 T 25-04-2016 IPR004368 Translation initiation factor IF-1 GO:0003743|GO:0006413 RJP_RS06440 2ebd17186e9df9a32e830ac1b807451e 71 SUPERFAMILY SSF50249 1 71 1.1E-26 T 25-04-2016 IPR012340 Nucleic acid-binding, OB-fold RJP_RS06440 2ebd17186e9df9a32e830ac1b807451e 71 Hamap MF_00075 Translation initiation factor IF-1 [infA]. 1 71 24.125 T 25-04-2016 IPR004368 Translation initiation factor IF-1 GO:0003743|GO:0006413 RJP_RS06440 2ebd17186e9df9a32e830ac1b807451e 71 Pfam PF01176 Translation initiation factor 1A / IF-1 7 70 5.4E-26 T 25-04-2016 IPR006196 RNA-binding domain, S1, IF1 type GO:0003723|GO:0003743|GO:0006413 RJP_RS04265 1f54def428f02abe005dd2f667f32f29 411 Gene3D G3DSA:3.40.50.620 3 233 4.7E-97 T 25-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold RJP_RS04265 1f54def428f02abe005dd2f667f32f29 411 PANTHER PTHR11766 1 410 1.0E-174 T 25-04-2016 IPR024088 Tyrosine-tRNA ligase, bacterial-type GO:0004831 KEGG: 00970+6.1.1.1 RJP_RS04265 1f54def428f02abe005dd2f667f32f29 411 Gene3D G3DSA:1.10.240.10 234 315 7.1E-31 T 25-04-2016 RJP_RS04265 1f54def428f02abe005dd2f667f32f29 411 SUPERFAMILY SSF55174 304 410 5.15E-16 T 25-04-2016 RJP_RS04265 1f54def428f02abe005dd2f667f32f29 411 Gene3D G3DSA:3.10.290.10 316 411 6.0E-24 T 25-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 RJP_RS04265 1f54def428f02abe005dd2f667f32f29 411 Hamap MF_02006 Tyrosine--tRNA ligase [tyrS]. 1 411 42.516 T 25-04-2016 IPR024107 Tyrosine-tRNA ligase, bacterial-type, type 1 GO:0004831 KEGG: 00970+6.1.1.1 RJP_RS04265 1f54def428f02abe005dd2f667f32f29 411 SUPERFAMILY SSF52374 2 322 1.04E-94 T 25-04-2016 RJP_RS04265 1f54def428f02abe005dd2f667f32f29 411 TIGRFAM TIGR00234 tyrS: tyrosine--tRNA ligase 6 410 9.4E-116 T 25-04-2016 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1|Reactome: REACT_71 RJP_RS04265 1f54def428f02abe005dd2f667f32f29 411 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 43 65 1.1E-26 T 25-04-2016 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1|Reactome: REACT_71 RJP_RS04265 1f54def428f02abe005dd2f667f32f29 411 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 184 206 1.1E-26 T 25-04-2016 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1|Reactome: REACT_71 RJP_RS04265 1f54def428f02abe005dd2f667f32f29 411 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 163 178 1.1E-26 T 25-04-2016 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1|Reactome: REACT_71 RJP_RS04265 1f54def428f02abe005dd2f667f32f29 411 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 217 229 1.1E-26 T 25-04-2016 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1|Reactome: REACT_71 RJP_RS04265 1f54def428f02abe005dd2f667f32f29 411 Pfam PF00579 tRNA synthetases class I (W and Y) 27 322 6.3E-75 T 25-04-2016 IPR002305 Aminoacyl-tRNA synthetase, class Ic GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 RJP_RS00425 608eaabbf3aafb2b5c60544acaf6fc1f 259 ProSitePatterns PS01311 Prolipoprotein diacylglyceryl transferase signature. 137 149 - T 25-04-2016 IPR001640 Prolipoprotein diacylglyceryl transferase GO:0009249|GO:0016020|GO:0016757|GO:0042158 UniPathway: UPA00664 RJP_RS00425 608eaabbf3aafb2b5c60544acaf6fc1f 259 TIGRFAM TIGR00544 lgt: prolipoprotein diacylglyceryl transferase 2 253 1.9E-75 T 25-04-2016 IPR001640 Prolipoprotein diacylglyceryl transferase GO:0009249|GO:0016020|GO:0016757|GO:0042158 UniPathway: UPA00664 RJP_RS00425 608eaabbf3aafb2b5c60544acaf6fc1f 259 Hamap MF_01147 Prolipoprotein diacylglyceryl transferase [lgt]. 5 259 18.818 T 25-04-2016 IPR001640 Prolipoprotein diacylglyceryl transferase GO:0009249|GO:0016020|GO:0016757|GO:0042158 UniPathway: UPA00664 RJP_RS00425 608eaabbf3aafb2b5c60544acaf6fc1f 259 PANTHER PTHR30589:SF0 1 253 1.1E-92 T 25-04-2016 RJP_RS00425 608eaabbf3aafb2b5c60544acaf6fc1f 259 PANTHER PTHR30589 1 253 1.1E-92 T 25-04-2016 RJP_RS00425 608eaabbf3aafb2b5c60544acaf6fc1f 259 Pfam PF01790 Prolipoprotein diacylglyceryl transferase 8 253 2.5E-77 T 25-04-2016 IPR001640 Prolipoprotein diacylglyceryl transferase GO:0009249|GO:0016020|GO:0016757|GO:0042158 UniPathway: UPA00664 RJP_RS06840 f0e96f35df1fb3b0362f5dd5f1a954a7 254 SMART SM00849 35 203 0.0012 T 25-04-2016 IPR001279 Metallo-beta-lactamase RJP_RS06840 f0e96f35df1fb3b0362f5dd5f1a954a7 254 PANTHER PTHR12553 3 249 4.2E-46 T 25-04-2016 RJP_RS06840 f0e96f35df1fb3b0362f5dd5f1a954a7 254 PANTHER PTHR12553:SF7 3 249 4.2E-46 T 25-04-2016 RJP_RS06840 f0e96f35df1fb3b0362f5dd5f1a954a7 254 Gene3D G3DSA:3.60.15.10 1 254 2.5E-66 T 25-04-2016 IPR001279 Metallo-beta-lactamase RJP_RS06840 f0e96f35df1fb3b0362f5dd5f1a954a7 254 Pfam PF12706 Beta-lactamase superfamily domain 48 224 8.6E-23 T 25-04-2016 IPR001279 Metallo-beta-lactamase RJP_RS06840 f0e96f35df1fb3b0362f5dd5f1a954a7 254 SUPERFAMILY SSF56281 3 254 3.01E-41 T 25-04-2016 IPR001279 Metallo-beta-lactamase RJP_RS01400 839841e80baa154d2eb5b6a69ecea9be 112 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 12 93 2.1E-13 T 25-04-2016 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 RJP_RS01400 839841e80baa154d2eb5b6a69ecea9be 112 ProSitePatterns PS00814 Adrenodoxin family, iron-sulfur binding region signature. 42 52 - T 25-04-2016 IPR018298 Adrenodoxin, iron-sulphur binding site GO:0009055|GO:0051537 RJP_RS01400 839841e80baa154d2eb5b6a69ecea9be 112 SUPERFAMILY SSF54292 5 104 1.67E-31 T 25-04-2016 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 RJP_RS01400 839841e80baa154d2eb5b6a69ecea9be 112 PANTHER PTHR23426:SF25 4 110 2.7E-57 T 25-04-2016 RJP_RS01400 839841e80baa154d2eb5b6a69ecea9be 112 Gene3D G3DSA:3.10.20.30 3 104 9.7E-43 T 25-04-2016 IPR012675 Beta-grasp domain RJP_RS01400 839841e80baa154d2eb5b6a69ecea9be 112 PANTHER PTHR23426 4 110 2.7E-57 T 25-04-2016 RJP_RS01400 839841e80baa154d2eb5b6a69ecea9be 112 PRINTS PR00355 Adrenodoxin signature 42 52 4.6E-10 T 25-04-2016 IPR001055 Adrenodoxin GO:0009055|GO:0051537 RJP_RS01400 839841e80baa154d2eb5b6a69ecea9be 112 PRINTS PR00355 Adrenodoxin signature 61 75 4.6E-10 T 25-04-2016 IPR001055 Adrenodoxin GO:0009055|GO:0051537 RJP_RS01400 839841e80baa154d2eb5b6a69ecea9be 112 PRINTS PR00355 Adrenodoxin signature 84 92 4.6E-10 T 25-04-2016 IPR001055 Adrenodoxin GO:0009055|GO:0051537 RJP_RS00835 2b9c2e472a254e9a6943ad3fa49e02a7 138 Pfam PF01245 Ribosomal protein L19 10 126 3.4E-40 T 25-04-2016 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RJP_RS00835 2b9c2e472a254e9a6943ad3fa49e02a7 138 PRINTS PR00061 Ribosomal protein L19 signature 101 126 7.3E-20 T 25-04-2016 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RJP_RS00835 2b9c2e472a254e9a6943ad3fa49e02a7 138 PRINTS PR00061 Ribosomal protein L19 signature 8 37 7.3E-20 T 25-04-2016 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RJP_RS00835 2b9c2e472a254e9a6943ad3fa49e02a7 138 Hamap MF_00402 50S ribosomal protein L19 [rplS]. 1 127 31.306 T 25-04-2016 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RJP_RS00835 2b9c2e472a254e9a6943ad3fa49e02a7 138 ProSitePatterns PS01015 Ribosomal protein L19 signature. 99 114 - T 25-04-2016 IPR018257 Ribosomal protein L19, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 RJP_RS00835 2b9c2e472a254e9a6943ad3fa49e02a7 138 SUPERFAMILY SSF50104 2 127 1.91E-38 T 25-04-2016 IPR008991 Translation protein SH3-like domain RJP_RS00835 2b9c2e472a254e9a6943ad3fa49e02a7 138 TIGRFAM TIGR01024 rplS_bact: ribosomal protein bL19 1 126 2.5E-48 T 25-04-2016 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RJP_RS00835 2b9c2e472a254e9a6943ad3fa49e02a7 138 PIRSF PIRSF002191 1 138 1.1E-43 T 25-04-2016 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RJP_RS00835 2b9c2e472a254e9a6943ad3fa49e02a7 138 PANTHER PTHR15680 2 126 4.8E-41 T 25-04-2016 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RJP_RS00475 dc4d8039a2205977c7db560e442de6b3 224 Gene3D G3DSA:3.90.45.10 46 219 8.4E-41 T 25-04-2016 IPR023635 Peptide deformylase RJP_RS00475 dc4d8039a2205977c7db560e442de6b3 224 PIRSF PIRSF004749 19 224 4.1E-51 T 25-04-2016 IPR000181 Formylmethionine deformylase GO:0005506|GO:0042586 RJP_RS00475 dc4d8039a2205977c7db560e442de6b3 224 Hamap MF_00163 Peptide deformylase [def]. 38 212 23.801 T 25-04-2016 IPR000181 Formylmethionine deformylase GO:0005506|GO:0042586 RJP_RS00475 dc4d8039a2205977c7db560e442de6b3 224 Pfam PF01327 Polypeptide deformylase 45 202 1.0E-36 T 25-04-2016 IPR023635 Peptide deformylase RJP_RS00475 dc4d8039a2205977c7db560e442de6b3 224 SUPERFAMILY SSF56420 36 207 1.01E-40 T 25-04-2016 IPR023635 Peptide deformylase RJP_RS00475 dc4d8039a2205977c7db560e442de6b3 224 PRINTS PR01576 Peptide deformylase signature 71 100 1.4E-18 T 25-04-2016 IPR000181 Formylmethionine deformylase GO:0005506|GO:0042586 RJP_RS00475 dc4d8039a2205977c7db560e442de6b3 224 PRINTS PR01576 Peptide deformylase signature 152 170 1.4E-18 T 25-04-2016 IPR000181 Formylmethionine deformylase GO:0005506|GO:0042586 RJP_RS00475 dc4d8039a2205977c7db560e442de6b3 224 PRINTS PR01576 Peptide deformylase signature 171 200 1.4E-18 T 25-04-2016 IPR000181 Formylmethionine deformylase GO:0005506|GO:0042586 RJP_RS00475 dc4d8039a2205977c7db560e442de6b3 224 PRINTS PR01576 Peptide deformylase signature 140 151 1.4E-18 T 25-04-2016 IPR000181 Formylmethionine deformylase GO:0005506|GO:0042586 RJP_RS00475 dc4d8039a2205977c7db560e442de6b3 224 PANTHER PTHR10458 79 214 2.0E-36 T 25-04-2016 IPR000181 Formylmethionine deformylase GO:0005506|GO:0042586 RJP_RS06025 f821bdba805a93e8125d86932372172d 87 Gene3D G3DSA:1.20.1250.20 10 84 1.0E-5 T 25-04-2016 RJP_RS06025 f821bdba805a93e8125d86932372172d 87 SUPERFAMILY SSF103473 3 85 6.15E-8 T 25-04-2016 IPR020846 Major facilitator superfamily domain RJP_RS06870 6ceb6822419e84abee1cea9d2c150370 381 SUPERFAMILY SSF53187 300 380 2.13E-55 T 25-04-2016 RJP_RS06870 6ceb6822419e84abee1cea9d2c150370 381 SUPERFAMILY SSF53187 3 182 2.13E-55 T 25-04-2016 RJP_RS06870 6ceb6822419e84abee1cea9d2c150370 381 Hamap MF_01690 Succinyl-diaminopimelate desuccinylase [dapE]. 1 381 43.584 T 25-04-2016 IPR005941 Succinyl-diaminopimelate desuccinylase, proteobacteria GO:0009014|GO:0009089 KEGG: 00300+3.5.1.18|UniPathway: UPA00034 RJP_RS06870 6ceb6822419e84abee1cea9d2c150370 381 TIGRFAM TIGR01246 dapE_proteo: succinyl-diaminopimelate desuccinylase 3 380 3.7E-160 T 25-04-2016 IPR005941 Succinyl-diaminopimelate desuccinylase, proteobacteria GO:0009014|GO:0009089 KEGG: 00300+3.5.1.18|UniPathway: UPA00034 RJP_RS06870 6ceb6822419e84abee1cea9d2c150370 381 SUPERFAMILY SSF55031 183 294 2.09E-25 T 25-04-2016 IPR011650 Peptidase M20, dimerisation domain RJP_RS06870 6ceb6822419e84abee1cea9d2c150370 381 Gene3D G3DSA:3.40.630.10 3 191 8.7E-64 T 25-04-2016 RJP_RS06870 6ceb6822419e84abee1cea9d2c150370 381 Gene3D G3DSA:3.40.630.10 324 380 8.7E-64 T 25-04-2016 RJP_RS06870 6ceb6822419e84abee1cea9d2c150370 381 PANTHER PTHR11014 2 381 3.9E-72 T 25-04-2016 RJP_RS06870 6ceb6822419e84abee1cea9d2c150370 381 Pfam PF01546 Peptidase family M20/M25/M40 66 378 7.1E-38 T 25-04-2016 IPR002933 Peptidase M20 GO:0008152|GO:0016787 RJP_RS06870 6ceb6822419e84abee1cea9d2c150370 381 Gene3D G3DSA:3.30.70.360 192 294 3.1E-36 T 25-04-2016 IPR011650 Peptidase M20, dimerisation domain RJP_RS06870 6ceb6822419e84abee1cea9d2c150370 381 ProSitePatterns PS00759 ArgE / dapE / ACY1 / CPG2 / yscS family signature 2. 101 139 - T 25-04-2016 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site GO:0006508|GO:0008237 RJP_RS06870 6ceb6822419e84abee1cea9d2c150370 381 Pfam PF07687 Peptidase dimerisation domain 179 286 1.6E-20 T 25-04-2016 IPR011650 Peptidase M20, dimerisation domain RJP_RS00195 235e8a0885d54017b1262564cb989d13 278 Gene3D G3DSA:3.40.30.10 96 267 1.6E-30 T 25-04-2016 IPR012336 Thioredoxin-like fold RJP_RS00195 235e8a0885d54017b1262564cb989d13 278 Pfam PF13462 Thioredoxin 98 263 3.0E-41 T 25-04-2016 IPR012336 Thioredoxin-like fold RJP_RS00195 235e8a0885d54017b1262564cb989d13 278 ProSitePatterns PS00194 Thioredoxin family active site. 111 129 - T 25-04-2016 IPR017937 Thioredoxin, conserved site GO:0045454 RJP_RS00195 235e8a0885d54017b1262564cb989d13 278 SUPERFAMILY SSF52833 88 262 4.02E-34 T 25-04-2016 IPR012336 Thioredoxin-like fold RJP_RS00195 235e8a0885d54017b1262564cb989d13 278 PANTHER PTHR13887:SF14 31 271 3.8E-22 T 25-04-2016 RJP_RS00195 235e8a0885d54017b1262564cb989d13 278 PANTHER PTHR13887 31 271 3.8E-22 T 25-04-2016 RJP_RS02235 f6c6ea2c39558fcfea607f481d709d1f 205 Pfam PF12848 ABC transporter 87 167 4.7E-20 T 25-04-2016 IPR032781 ABC-transporter extension domain RJP_RS02235 f6c6ea2c39558fcfea607f481d709d1f 205 PANTHER PTHR19211 1 204 1.4E-65 T 25-04-2016 RJP_RS02235 f6c6ea2c39558fcfea607f481d709d1f 205 SUPERFAMILY SSF52540 5 130 6.4E-20 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RJP_RS02235 f6c6ea2c39558fcfea607f481d709d1f 205 Gene3D G3DSA:3.40.50.300 11 140 1.3E-20 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RJP_RS02235 f6c6ea2c39558fcfea607f481d709d1f 205 PANTHER PTHR19211:SF38 1 204 1.4E-65 T 25-04-2016 RJP_RS02730 959164e50409443c05874a346b8a5ef9 128 SUPERFAMILY SSF88723 1 122 7.01E-14 T 25-04-2016 IPR029060 PIN domain-like RJP_RS02730 959164e50409443c05874a346b8a5ef9 128 Pfam PF01850 PIN domain 4 117 4.3E-8 T 25-04-2016 IPR002716 PIN domain RJP_RS02730 959164e50409443c05874a346b8a5ef9 128 Gene3D G3DSA:3.40.50.1010 1 117 3.9E-4 T 25-04-2016 IPR029060 PIN domain-like RJP_RS03950 0ea579b0ef7a372499d2a699f60ad55e 334 SUPERFAMILY SSF81901 86 275 4.71E-6 T 25-04-2016 RJP_RS03950 0ea579b0ef7a372499d2a699f60ad55e 334 Pfam PF07219 HemY protein N-terminus 27 116 1.8E-9 T 25-04-2016 IPR010817 HemY, N-terminal UniPathway: UPA00252 RJP_RS03950 0ea579b0ef7a372499d2a699f60ad55e 334 Gene3D G3DSA:1.25.40.10 130 255 2.2E-7 T 25-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 RJP_RS00495 d50fecd979e03215deb1cdc31a4f0e80 622 SMART SM01228 539 610 3.8E-31 T 25-04-2016 RJP_RS00495 d50fecd979e03215deb1cdc31a4f0e80 622 Pfam PF01134 Glucose inhibited division protein A 5 394 4.0E-170 T 25-04-2016 IPR002218 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG-related GO:0008033|GO:0050660 RJP_RS00495 d50fecd979e03215deb1cdc31a4f0e80 622 Gene3D G3DSA:3.50.50.60 3 170 2.2E-33 T 25-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RJP_RS00495 d50fecd979e03215deb1cdc31a4f0e80 622 Hamap MF_00129 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG [mnmG]. 2 617 40.35 T 25-04-2016 IPR004416 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG GO:0002098 RJP_RS00495 d50fecd979e03215deb1cdc31a4f0e80 622 Pfam PF13932 GidA associated domain 397 608 3.7E-61 T 25-04-2016 IPR026904 GidA associated domain 3 RJP_RS00495 d50fecd979e03215deb1cdc31a4f0e80 622 TIGRFAM TIGR00136 gidA: tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA 4 615 3.6E-253 T 25-04-2016 IPR004416 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG GO:0002098 RJP_RS00495 d50fecd979e03215deb1cdc31a4f0e80 622 ProSitePatterns PS01281 Glucose inhibited division protein A family signature 2. 364 387 - T 25-04-2016 IPR020595 MnmG-related, conserved site RJP_RS00495 d50fecd979e03215deb1cdc31a4f0e80 622 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 5 27 5.6E-6 T 25-04-2016 RJP_RS00495 d50fecd979e03215deb1cdc31a4f0e80 622 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 148 157 5.6E-6 T 25-04-2016 RJP_RS00495 d50fecd979e03215deb1cdc31a4f0e80 622 PANTHER PTHR11806:SF0 3 615 0.0 T 25-04-2016 RJP_RS00495 d50fecd979e03215deb1cdc31a4f0e80 622 SUPERFAMILY SSF51905 94 257 2.8E-43 T 25-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RJP_RS00495 d50fecd979e03215deb1cdc31a4f0e80 622 SUPERFAMILY SSF51905 3 63 2.8E-43 T 25-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RJP_RS00495 d50fecd979e03215deb1cdc31a4f0e80 622 PANTHER PTHR11806 3 615 0.0 T 25-04-2016 RJP_RS00495 d50fecd979e03215deb1cdc31a4f0e80 622 ProSitePatterns PS01280 Glucose inhibited division protein A family signature 1. 269 283 - T 25-04-2016 IPR020595 MnmG-related, conserved site RJP_RS04870 e47e2bc1cbbcddb1a6de00efae4fbc33 68 SUPERFAMILY SSF143034 2 62 8.5E-19 T 25-04-2016 RJP_RS04870 e47e2bc1cbbcddb1a6de00efae4fbc33 68 ProSitePatterns PS00936 Ribosomal protein L35 signature. 5 31 - T 25-04-2016 IPR018265 Ribosomal protein L35, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 RJP_RS04870 e47e2bc1cbbcddb1a6de00efae4fbc33 68 PANTHER PTHR33343 1 65 1.8E-19 T 25-04-2016 RJP_RS04870 e47e2bc1cbbcddb1a6de00efae4fbc33 68 Hamap MF_00514 50S ribosomal protein L35 [rpmI]. 1 64 16.339 T 25-04-2016 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 RJP_RS04870 e47e2bc1cbbcddb1a6de00efae4fbc33 68 Pfam PF01632 Ribosomal protein L35 2 60 7.1E-20 T 25-04-2016 IPR021137 Ribosomal protein L35 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RJP_RS04870 e47e2bc1cbbcddb1a6de00efae4fbc33 68 PRINTS PR00064 Ribosomal protein L35 signature 21 35 1.7E-11 T 25-04-2016 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 RJP_RS04870 e47e2bc1cbbcddb1a6de00efae4fbc33 68 PRINTS PR00064 Ribosomal protein L35 signature 3 20 1.7E-11 T 25-04-2016 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 RJP_RS04870 e47e2bc1cbbcddb1a6de00efae4fbc33 68 PRINTS PR00064 Ribosomal protein L35 signature 36 54 1.7E-11 T 25-04-2016 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 RJP_RS04870 e47e2bc1cbbcddb1a6de00efae4fbc33 68 TIGRFAM TIGR00001 rpmI_bact: ribosomal protein bL35 2 65 5.0E-24 T 25-04-2016 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 RJP_RS03780 ad98d01a13c34f77b92ecf132c07bbfd 41 Hamap MF_00251 50S ribosomal protein L36 [rpmJ]. 1 41 16.444 T 25-04-2016 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RJP_RS03780 ad98d01a13c34f77b92ecf132c07bbfd 41 Pfam PF00444 Ribosomal protein L36 1 41 1.3E-14 T 25-04-2016 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RJP_RS03780 ad98d01a13c34f77b92ecf132c07bbfd 41 PANTHER PTHR18804 1 41 8.5E-14 T 25-04-2016 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RJP_RS03780 ad98d01a13c34f77b92ecf132c07bbfd 41 PANTHER PTHR18804:SF11 1 41 8.5E-14 T 25-04-2016 RJP_RS03780 ad98d01a13c34f77b92ecf132c07bbfd 41 ProSitePatterns PS00828 Ribosomal protein L36 signature. 14 40 - T 25-04-2016 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RJP_RS03780 ad98d01a13c34f77b92ecf132c07bbfd 41 SUPERFAMILY SSF57840 1 41 1.57E-11 T 25-04-2016 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RJP_RS05275 fed91c08255ea14eccc834a9fcf7db59 452 SMART SM00865 210 329 1.9E-58 T 25-04-2016 IPR018316 Tubulin/FtsZ, 2-layer sandwich domain RJP_RS05275 fed91c08255ea14eccc834a9fcf7db59 452 Gene3D G3DSA:3.30.1330.20 218 325 3.1E-49 T 25-04-2016 IPR018316 Tubulin/FtsZ, 2-layer sandwich domain RJP_RS05275 fed91c08255ea14eccc834a9fcf7db59 452 SUPERFAMILY SSF52490 16 211 8.11E-68 T 25-04-2016 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 RJP_RS05275 fed91c08255ea14eccc834a9fcf7db59 452 PRINTS PR00423 Cell division protein FtsZ signature 215 236 1.3E-50 T 25-04-2016 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 RJP_RS05275 fed91c08255ea14eccc834a9fcf7db59 452 PRINTS PR00423 Cell division protein FtsZ signature 129 150 1.3E-50 T 25-04-2016 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 RJP_RS05275 fed91c08255ea14eccc834a9fcf7db59 452 PRINTS PR00423 Cell division protein FtsZ signature 101 121 1.3E-50 T 25-04-2016 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 RJP_RS05275 fed91c08255ea14eccc834a9fcf7db59 452 PRINTS PR00423 Cell division protein FtsZ signature 192 214 1.3E-50 T 25-04-2016 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 RJP_RS05275 fed91c08255ea14eccc834a9fcf7db59 452 PANTHER PTHR30314:SF3 3 385 1.1E-169 T 25-04-2016 RJP_RS05275 fed91c08255ea14eccc834a9fcf7db59 452 PANTHER PTHR30314 3 385 1.1E-169 T 25-04-2016 RJP_RS05275 fed91c08255ea14eccc834a9fcf7db59 452 ProSitePatterns PS01134 FtsZ protein signature 1. 47 81 - T 25-04-2016 IPR020805 Cell division protein FtsZ, conserved site GO:0005525|GO:0005737 RJP_RS05275 fed91c08255ea14eccc834a9fcf7db59 452 Gene3D G3DSA:3.40.50.1440 16 217 9.6E-92 T 25-04-2016 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 RJP_RS05275 fed91c08255ea14eccc834a9fcf7db59 452 ProSitePatterns PS01135 FtsZ protein signature 2. 100 121 - T 25-04-2016 IPR020805 Cell division protein FtsZ, conserved site GO:0005525|GO:0005737 RJP_RS05275 fed91c08255ea14eccc834a9fcf7db59 452 TIGRFAM TIGR00065 ftsZ: cell division protein FtsZ 14 332 3.0E-121 T 25-04-2016 IPR000158 Cell division protein FtsZ GO:0005525 RJP_RS05275 fed91c08255ea14eccc834a9fcf7db59 452 Hamap MF_00909 Cell division protein FtsZ [ftsZ]. 12 387 37.314 T 25-04-2016 IPR000158 Cell division protein FtsZ GO:0005525 RJP_RS05275 fed91c08255ea14eccc834a9fcf7db59 452 Pfam PF00091 Tubulin/FtsZ family, GTPase domain 17 177 9.8E-40 T 25-04-2016 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 RJP_RS05275 fed91c08255ea14eccc834a9fcf7db59 452 SMART SM00864 16 208 7.2E-107 T 25-04-2016 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 RJP_RS05275 fed91c08255ea14eccc834a9fcf7db59 452 Pfam PF12327 FtsZ family, C-terminal domain 225 321 3.1E-38 T 25-04-2016 IPR024757 Cell division protein FtsZ, C-terminal RJP_RS05275 fed91c08255ea14eccc834a9fcf7db59 452 SUPERFAMILY SSF55307 207 325 6.18E-42 T 25-04-2016 IPR008280 Tubulin/FtsZ, C-terminal RJP_RS06290 e9bb43dd58c6d357281f67e5611c27c8 878 PANTHER PTHR11670:SF1 407 697 0.0 T 25-04-2016 RJP_RS06290 e9bb43dd58c6d357281f67e5611c27c8 878 PANTHER PTHR11670:SF1 736 878 0.0 T 25-04-2016 RJP_RS06290 e9bb43dd58c6d357281f67e5611c27c8 878 PANTHER PTHR11670:SF1 7 386 0.0 T 25-04-2016 RJP_RS06290 e9bb43dd58c6d357281f67e5611c27c8 878 Gene3D G3DSA:3.30.499.10 23 242 5.0E-73 T 25-04-2016 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 RJP_RS06290 e9bb43dd58c6d357281f67e5611c27c8 878 Gene3D G3DSA:3.40.1060.10 243 360 5.8E-38 T 25-04-2016 IPR015932 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 2 GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 RJP_RS06290 e9bb43dd58c6d357281f67e5611c27c8 878 PRINTS PR00415 Aconitase family signature 272 285 1.8E-38 T 25-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 RJP_RS06290 e9bb43dd58c6d357281f67e5611c27c8 878 PRINTS PR00415 Aconitase family signature 365 379 1.8E-38 T 25-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 RJP_RS06290 e9bb43dd58c6d357281f67e5611c27c8 878 PRINTS PR00415 Aconitase family signature 422 433 1.8E-38 T 25-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 RJP_RS06290 e9bb43dd58c6d357281f67e5611c27c8 878 PRINTS PR00415 Aconitase family signature 143 156 1.8E-38 T 25-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 RJP_RS06290 e9bb43dd58c6d357281f67e5611c27c8 878 PRINTS PR00415 Aconitase family signature 484 497 1.8E-38 T 25-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 RJP_RS06290 e9bb43dd58c6d357281f67e5611c27c8 878 PRINTS PR00415 Aconitase family signature 196 209 1.8E-38 T 25-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 RJP_RS06290 e9bb43dd58c6d357281f67e5611c27c8 878 PRINTS PR00415 Aconitase family signature 167 175 1.8E-38 T 25-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 RJP_RS06290 e9bb43dd58c6d357281f67e5611c27c8 878 PRINTS PR00415 Aconitase family signature 210 225 1.8E-38 T 25-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 RJP_RS06290 e9bb43dd58c6d357281f67e5611c27c8 878 PRINTS PR00415 Aconitase family signature 286 299 1.8E-38 T 25-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 RJP_RS06290 e9bb43dd58c6d357281f67e5611c27c8 878 SUPERFAMILY SSF52016 617 875 2.16E-80 T 25-04-2016 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel RJP_RS06290 e9bb43dd58c6d357281f67e5611c27c8 878 Gene3D G3DSA:3.30.499.10 363 565 2.4E-62 T 25-04-2016 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 RJP_RS06290 e9bb43dd58c6d357281f67e5611c27c8 878 ProSitePatterns PS00450 Aconitase family signature 1. 418 434 - T 25-04-2016 IPR018136 Aconitase family, 4Fe-4S cluster binding site KEGG: 00290+4.2.1.33|UniPathway: UPA00048 RJP_RS06290 e9bb43dd58c6d357281f67e5611c27c8 878 PANTHER PTHR11670 407 697 0.0 T 25-04-2016 IPR015937 Aconitase/isopropylmalate dehydratase GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 RJP_RS06290 e9bb43dd58c6d357281f67e5611c27c8 878 PANTHER PTHR11670 736 878 0.0 T 25-04-2016 IPR015937 Aconitase/isopropylmalate dehydratase GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 RJP_RS06290 e9bb43dd58c6d357281f67e5611c27c8 878 PANTHER PTHR11670 7 386 0.0 T 25-04-2016 IPR015937 Aconitase/isopropylmalate dehydratase GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 RJP_RS06290 e9bb43dd58c6d357281f67e5611c27c8 878 SUPERFAMILY SSF53732 6 613 7.85E-216 T 25-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 RJP_RS06290 e9bb43dd58c6d357281f67e5611c27c8 878 ProSitePatterns PS01244 Aconitase family signature 2. 484 497 - T 25-04-2016 IPR018136 Aconitase family, 4Fe-4S cluster binding site KEGG: 00290+4.2.1.33|UniPathway: UPA00048 RJP_RS06290 e9bb43dd58c6d357281f67e5611c27c8 878 Gene3D G3DSA:3.20.19.10 623 875 5.2E-77 T 25-04-2016 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel RJP_RS06290 e9bb43dd58c6d357281f67e5611c27c8 878 Pfam PF00694 Aconitase C-terminal domain 676 803 1.4E-44 T 25-04-2016 IPR000573 Aconitase A/isopropylmalate dehydratase small subunit, swivel domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 RJP_RS06290 e9bb43dd58c6d357281f67e5611c27c8 878 Pfam PF00330 Aconitase family (aconitate hydratase) 71 553 4.6E-184 T 25-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 RJP_RS06290 e9bb43dd58c6d357281f67e5611c27c8 878 TIGRFAM TIGR01341 aconitase_1: aconitate hydratase 1 23 875 0.0 T 25-04-2016 IPR006249 Aconitase/Iron-responsive element-binding protein 2 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00720+4.2.1.3 RJP_RS04055 25ecd17ae3c9132c7aa2b6fcded75751 110 PANTHER PTHR10072:SF41 1 110 3.9E-51 T 25-04-2016 RJP_RS04055 25ecd17ae3c9132c7aa2b6fcded75751 110 TIGRFAM TIGR00049 TIGR00049: iron-sulfur cluster assembly accessory protein 5 110 6.5E-40 T 25-04-2016 IPR016092 FeS cluster insertion protein GO:0005198|GO:0016226|GO:0051536 RJP_RS04055 25ecd17ae3c9132c7aa2b6fcded75751 110 PANTHER PTHR10072 1 110 3.9E-51 T 25-04-2016 RJP_RS04055 25ecd17ae3c9132c7aa2b6fcded75751 110 SUPERFAMILY SSF89360 3 96 2.55E-29 T 25-04-2016 IPR000361 FeS cluster biogenesis RJP_RS04055 25ecd17ae3c9132c7aa2b6fcded75751 110 Gene3D G3DSA:2.60.300.12 4 99 6.5E-34 T 25-04-2016 IPR000361 FeS cluster biogenesis RJP_RS04055 25ecd17ae3c9132c7aa2b6fcded75751 110 Pfam PF01521 Iron-sulphur cluster biosynthesis 5 106 1.1E-20 T 25-04-2016 IPR000361 FeS cluster biogenesis RJP_RS04055 25ecd17ae3c9132c7aa2b6fcded75751 110 ProSitePatterns PS01152 Hypothetical hesB/yadR/yfhF family signature. 91 108 - T 25-04-2016 IPR017870 FeS cluster insertion, C-terminal, conserved site RJP_RS06800 3d279077176ccbe95be615263443b5e6 107 Gene3D G3DSA:3.30.1310.10 1 107 4.7E-41 T 25-04-2016 IPR004401 Nucleoid-associated protein YbaB/EbfC family RJP_RS06800 3d279077176ccbe95be615263443b5e6 107 Pfam PF02575 YbaB/EbfC DNA-binding family 8 97 2.9E-31 T 25-04-2016 IPR004401 Nucleoid-associated protein YbaB/EbfC family RJP_RS06800 3d279077176ccbe95be615263443b5e6 107 TIGRFAM TIGR00103 DNA_YbaB_EbfC: DNA-binding protein, YbaB/EbfC family 3 102 4.6E-28 T 25-04-2016 IPR004401 Nucleoid-associated protein YbaB/EbfC family RJP_RS06800 3d279077176ccbe95be615263443b5e6 107 Hamap MF_00274 Nucleoid-associated protein YbaB [ybaB]. 2 96 20.939 T 25-04-2016 IPR004401 Nucleoid-associated protein YbaB/EbfC family RJP_RS06800 3d279077176ccbe95be615263443b5e6 107 PANTHER PTHR33449:SF1 1 107 5.8E-36 T 25-04-2016 RJP_RS06800 3d279077176ccbe95be615263443b5e6 107 SUPERFAMILY SSF82607 8 101 1.96E-30 T 25-04-2016 IPR004401 Nucleoid-associated protein YbaB/EbfC family RJP_RS06800 3d279077176ccbe95be615263443b5e6 107 PIRSF PIRSF004555 1 107 4.4E-37 T 25-04-2016 IPR004401 Nucleoid-associated protein YbaB/EbfC family RJP_RS06800 3d279077176ccbe95be615263443b5e6 107 PANTHER PTHR33449 1 107 5.8E-36 T 25-04-2016 RJP_RS00800 451fd57917b9d91a44dd779b5b69ad66 891 Pfam PF04610 TrbL/VirB6 plasmid conjugal transfer protein 521 710 1.1E-17 T 25-04-2016 IPR007688 Plasmid conjugal transfer TrbL/VirB6 GO:0030255 RJP_RS06545 6567a55ac152ee54ae972977de0607f5 230 Pfam PF01578 Cytochrome C assembly protein 11 179 1.5E-25 T 25-04-2016 IPR002541 Cytochrome c assembly protein GO:0017004|GO:0020037 RJP_RS06545 6567a55ac152ee54ae972977de0607f5 230 PANTHER PTHR30071 1 220 4.2E-58 T 25-04-2016 RJP_RS06545 6567a55ac152ee54ae972977de0607f5 230 TIGRFAM TIGR01191 ccmC: heme exporter protein CcmC 41 224 4.9E-79 T 25-04-2016 IPR003557 Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004 RJP_RS06545 6567a55ac152ee54ae972977de0607f5 230 PRINTS PR01386 Cytochrome c-type biogenesis protein CcmC signature 58 78 1.64E-55 T 25-04-2016 IPR003557 Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004 RJP_RS06545 6567a55ac152ee54ae972977de0607f5 230 PRINTS PR01386 Cytochrome c-type biogenesis protein CcmC signature 200 224 1.64E-55 T 25-04-2016 IPR003557 Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004 RJP_RS06545 6567a55ac152ee54ae972977de0607f5 230 PRINTS PR01386 Cytochrome c-type biogenesis protein CcmC signature 117 137 1.64E-55 T 25-04-2016 IPR003557 Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004 RJP_RS06545 6567a55ac152ee54ae972977de0607f5 230 PRINTS PR01386 Cytochrome c-type biogenesis protein CcmC signature 96 116 1.64E-55 T 25-04-2016 IPR003557 Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004 RJP_RS06545 6567a55ac152ee54ae972977de0607f5 230 PRINTS PR01386 Cytochrome c-type biogenesis protein CcmC signature 152 178 1.64E-55 T 25-04-2016 IPR003557 Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004 RJP_RS06545 6567a55ac152ee54ae972977de0607f5 230 PRINTS PR01386 Cytochrome c-type biogenesis protein CcmC signature 41 58 1.64E-55 T 25-04-2016 IPR003557 Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004 RJP_RS02380 72e4050e401ecabc16f9fc83efc478b3 339 PANTHER PTHR30518:SF2 10 330 2.6E-69 T 25-04-2016 RJP_RS02380 72e4050e401ecabc16f9fc83efc478b3 339 TIGRFAM TIGR00247 TIGR00247: conserved hypothetical protein, YceG family 144 324 1.7E-56 T 25-04-2016 IPR003770 Uncharacterised protein family UPF0755, YceG-like RJP_RS02380 72e4050e401ecabc16f9fc83efc478b3 339 PANTHER PTHR30518 10 330 2.6E-69 T 25-04-2016 RJP_RS02380 72e4050e401ecabc16f9fc83efc478b3 339 Gene3D G3DSA:3.30.160.60 291 323 1.6E-14 T 25-04-2016 IPR013087 Zinc finger C2H2-type/integrase DNA-binding domain GO:0003676 RJP_RS02380 72e4050e401ecabc16f9fc83efc478b3 339 Pfam PF02618 YceG-like family 45 317 6.5E-74 T 25-04-2016 IPR003770 Uncharacterised protein family UPF0755, YceG-like RJP_RS00300 fc7457b302cac2a7e932ee22e71f9bc4 440 Pfam PF10871 Protein of unknown function (DUF2748) 1 440 2.4E-254 T 25-04-2016 IPR020183 Uncharacterised protein family RC0048 RJP_RS00300 fc7457b302cac2a7e932ee22e71f9bc4 440 ProDom PD216750 RP034 RC0048 19 440 0.0 T 25-04-2016 IPR020183 Uncharacterised protein family RC0048 RJP_RS04520 b948836c2600c1cd0c959d93cb0d86b7 101 Gene3D G3DSA:1.25.40.20 9 97 1.9E-15 T 25-04-2016 IPR020683 Ankyrin repeat-containing domain RJP_RS04520 b948836c2600c1cd0c959d93cb0d86b7 101 Pfam PF12796 Ankyrin repeats (3 copies) 12 73 1.4E-9 T 25-04-2016 IPR020683 Ankyrin repeat-containing domain RJP_RS04520 b948836c2600c1cd0c959d93cb0d86b7 101 SMART SM00248 15 44 0.0025 T 25-04-2016 IPR002110 Ankyrin repeat GO:0005515 RJP_RS04520 b948836c2600c1cd0c959d93cb0d86b7 101 SMART SM00248 52 81 5.5 T 25-04-2016 IPR002110 Ankyrin repeat GO:0005515 RJP_RS04520 b948836c2600c1cd0c959d93cb0d86b7 101 SUPERFAMILY SSF48403 10 97 1.6E-14 T 25-04-2016 IPR020683 Ankyrin repeat-containing domain RJP_RS05185 1e73bcb1aa42a6f14b2ae637c76eacd7 77 Pfam PF00366 Ribosomal protein S17 8 74 2.6E-29 T 25-04-2016 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RJP_RS05185 1e73bcb1aa42a6f14b2ae637c76eacd7 77 PANTHER PTHR10744 1 74 3.0E-31 T 25-04-2016 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RJP_RS05185 1e73bcb1aa42a6f14b2ae637c76eacd7 77 TIGRFAM TIGR03635 uS17_bact: ribosomal protein uS17 3 74 1.4E-33 T 25-04-2016 IPR019984 Ribosomal protein S17, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 RJP_RS05185 1e73bcb1aa42a6f14b2ae637c76eacd7 77 SUPERFAMILY SSF50249 3 75 6.85E-29 T 25-04-2016 IPR012340 Nucleic acid-binding, OB-fold RJP_RS05185 1e73bcb1aa42a6f14b2ae637c76eacd7 77 Gene3D G3DSA:2.40.50.140 3 75 7.9E-31 T 25-04-2016 IPR012340 Nucleic acid-binding, OB-fold RJP_RS05185 1e73bcb1aa42a6f14b2ae637c76eacd7 77 ProDom PD001295 RIBOSOMAL S17 30S RIBONUCLEOPROTEIN RRNA-BINDING RNA-BINDING 40S S11 S17P S11 1 74 2.0E-35 T 25-04-2016 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RJP_RS05185 1e73bcb1aa42a6f14b2ae637c76eacd7 77 ProSitePatterns PS00056 Ribosomal protein S17 signature. 54 66 - T 25-04-2016 IPR019979 Ribosomal protein S17, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 RJP_RS05185 1e73bcb1aa42a6f14b2ae637c76eacd7 77 PRINTS PR00973 Ribosomal protein S17 family signature 54 64 1.0E-12 T 25-04-2016 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RJP_RS05185 1e73bcb1aa42a6f14b2ae637c76eacd7 77 PRINTS PR00973 Ribosomal protein S17 family signature 22 45 1.0E-12 T 25-04-2016 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RJP_RS05185 1e73bcb1aa42a6f14b2ae637c76eacd7 77 PRINTS PR00973 Ribosomal protein S17 family signature 64 71 1.0E-12 T 25-04-2016 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RJP_RS05185 1e73bcb1aa42a6f14b2ae637c76eacd7 77 Hamap MF_01345_B 30S ribosomal protein S17 [rpsQ]. 1 77 22.533 T 25-04-2016 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RJP_RS04440 22319846643a83c7e7ddc48886b1a8e3 639 SUPERFAMILY SSF46600 193 244 7.45E-12 T 25-04-2016 IPR001943 UVR domain GO:0005515 RJP_RS04440 22319846643a83c7e7ddc48886b1a8e3 639 SUPERFAMILY SSF82771 21 103 3.92E-20 T 25-04-2016 IPR000305 GIY-YIG nuclease superfamily RJP_RS04440 22319846643a83c7e7ddc48886b1a8e3 639 Pfam PF02151 UvrB/uvrC motif 207 240 1.5E-8 T 25-04-2016 IPR001943 UVR domain GO:0005515 RJP_RS04440 22319846643a83c7e7ddc48886b1a8e3 639 Pfam PF14520 Helix-hairpin-helix domain 584 635 3.9E-7 T 25-04-2016 RJP_RS04440 22319846643a83c7e7ddc48886b1a8e3 639 Pfam PF08459 UvrC Helix-hairpin-helix N-terminal 384 569 2.5E-38 T 25-04-2016 IPR001162 UvrC family homology region RJP_RS04440 22319846643a83c7e7ddc48886b1a8e3 639 Pfam PF01541 GIY-YIG catalytic domain 22 96 1.1E-11 T 25-04-2016 IPR000305 GIY-YIG nuclease superfamily RJP_RS04440 22319846643a83c7e7ddc48886b1a8e3 639 PANTHER PTHR30562 4 635 1.4E-194 T 25-04-2016 RJP_RS04440 22319846643a83c7e7ddc48886b1a8e3 639 Gene3D G3DSA:4.10.860.10 185 244 2.7E-15 T 25-04-2016 IPR001943 UVR domain GO:0005515 RJP_RS04440 22319846643a83c7e7ddc48886b1a8e3 639 Gene3D G3DSA:1.10.150.20 583 636 1.2E-20 T 25-04-2016 RJP_RS04440 22319846643a83c7e7ddc48886b1a8e3 639 SUPERFAMILY SSF47781 538 637 9.53E-22 T 25-04-2016 IPR010994 RuvA domain 2-like Reactome: REACT_216 RJP_RS04440 22319846643a83c7e7ddc48886b1a8e3 639 PANTHER PTHR30562:SF1 4 635 1.4E-194 T 25-04-2016 RJP_RS04440 22319846643a83c7e7ddc48886b1a8e3 639 Hamap MF_00203 UvrABC system protein C [uvrC]. 8 634 27.673 T 25-04-2016 IPR004791 UvrABC system, subunit C GO:0005737|GO:0006281|GO:0009380|GO:0009381 RJP_RS04440 22319846643a83c7e7ddc48886b1a8e3 639 TIGRFAM TIGR00194 uvrC: excinuclease ABC subunit C 12 432 5.4E-116 T 25-04-2016 IPR004791 UvrABC system, subunit C GO:0005737|GO:0006281|GO:0009380|GO:0009381 RJP_RS04440 22319846643a83c7e7ddc48886b1a8e3 639 SMART SM00465 21 101 1.1E-23 T 25-04-2016 IPR000305 GIY-YIG nuclease superfamily RJP_RS04440 22319846643a83c7e7ddc48886b1a8e3 639 Gene3D G3DSA:3.40.1440.10 22 100 2.9E-9 T 25-04-2016 IPR027299 GIY-YIG domain RJP_RS02665 6ad3547e52c15a37ccb57e2a8a7eec83 504 Pfam PF00795 Carbon-nitrogen hydrolase 216 459 1.7E-36 T 25-04-2016 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 RJP_RS02665 6ad3547e52c15a37ccb57e2a8a7eec83 504 SUPERFAMILY SSF56317 212 449 1.7E-36 T 25-04-2016 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 RJP_RS02665 6ad3547e52c15a37ccb57e2a8a7eec83 504 PANTHER PTHR23088 200 487 1.5E-59 T 25-04-2016 RJP_RS02665 6ad3547e52c15a37ccb57e2a8a7eec83 504 Hamap MF_01148 Apolipoprotein N-acyltransferase [lnt]. 1 480 21.718 T 25-04-2016 IPR004563 Apolipoprotein N-acyltransferase GO:0016021|GO:0016410|GO:0042158 UniPathway: UPA00666 RJP_RS02665 6ad3547e52c15a37ccb57e2a8a7eec83 504 TIGRFAM TIGR00546 lnt: apolipoprotein N-acyltransferase 54 442 6.3E-123 T 25-04-2016 IPR004563 Apolipoprotein N-acyltransferase GO:0016021|GO:0016410|GO:0042158 UniPathway: UPA00666 RJP_RS02665 6ad3547e52c15a37ccb57e2a8a7eec83 504 Gene3D G3DSA:3.60.110.10 213 450 3.9E-23 T 25-04-2016 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 RJP_RS02665 6ad3547e52c15a37ccb57e2a8a7eec83 504 PANTHER PTHR23088:SF29 200 487 1.5E-59 T 25-04-2016 RJP_RS06320 8123f94a373dd7815197a7c9e97ed6a2 459 PANTHER PTHR22912 1 452 1.2E-204 T 25-04-2016 RJP_RS06320 8123f94a373dd7815197a7c9e97ed6a2 459 Gene3D G3DSA:3.30.390.30 327 458 1.9E-43 T 25-04-2016 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 RJP_RS06320 8123f94a373dd7815197a7c9e97ed6a2 459 Gene3D G3DSA:3.50.50.60 141 326 1.5E-49 T 25-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RJP_RS06320 8123f94a373dd7815197a7c9e97ed6a2 459 Gene3D G3DSA:3.50.50.60 2 140 2.0E-43 T 25-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RJP_RS06320 8123f94a373dd7815197a7c9e97ed6a2 459 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 37 52 4.1E-65 T 25-04-2016 RJP_RS06320 8123f94a373dd7815197a7c9e97ed6a2 459 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 170 195 4.1E-65 T 25-04-2016 RJP_RS06320 8123f94a373dd7815197a7c9e97ed6a2 459 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 300 307 4.1E-65 T 25-04-2016 RJP_RS06320 8123f94a373dd7815197a7c9e97ed6a2 459 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 336 357 4.1E-65 T 25-04-2016 RJP_RS06320 8123f94a373dd7815197a7c9e97ed6a2 459 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 258 272 4.1E-65 T 25-04-2016 RJP_RS06320 8123f94a373dd7815197a7c9e97ed6a2 459 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 423 443 4.1E-65 T 25-04-2016 RJP_RS06320 8123f94a373dd7815197a7c9e97ed6a2 459 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 134 143 4.1E-65 T 25-04-2016 RJP_RS06320 8123f94a373dd7815197a7c9e97ed6a2 459 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 401 416 4.1E-65 T 25-04-2016 RJP_RS06320 8123f94a373dd7815197a7c9e97ed6a2 459 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 5 27 4.1E-65 T 25-04-2016 RJP_RS06320 8123f94a373dd7815197a7c9e97ed6a2 459 TIGRFAM TIGR01350 lipoamide_DH: dihydrolipoyl dehydrogenase 3 459 7.9E-172 T 25-04-2016 IPR006258 Dihydrolipoamide dehydrogenase GO:0004148|GO:0050660|GO:0055114 KEGG: 00010+1.8.1.4|KEGG: 00020+1.8.1.4|KEGG: 00260+1.8.1.4|KEGG: 00280+1.8.1.4|KEGG: 00620+1.8.1.4|KEGG: 00640+1.8.1.4|MetaCyc: PWY-5046|MetaCyc: PWY-5084 RJP_RS06320 8123f94a373dd7815197a7c9e97ed6a2 459 SUPERFAMILY SSF55424 336 458 4.64E-37 T 25-04-2016 IPR016156 FAD/NAD-linked reductase, dimerisation domain GO:0016491|GO:0050660|GO:0055114 RJP_RS06320 8123f94a373dd7815197a7c9e97ed6a2 459 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 4 320 1.0E-66 T 25-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RJP_RS06320 8123f94a373dd7815197a7c9e97ed6a2 459 SUPERFAMILY SSF51905 1 366 1.4E-57 T 25-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RJP_RS06320 8123f94a373dd7815197a7c9e97ed6a2 459 Pfam PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain 340 448 8.2E-34 T 25-04-2016 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 RJP_RS06320 8123f94a373dd7815197a7c9e97ed6a2 459 PANTHER PTHR22912:SF125 1 452 1.2E-204 T 25-04-2016 RJP_RS06320 8123f94a373dd7815197a7c9e97ed6a2 459 ProSitePatterns PS00076 Pyridine nucleotide-disulphide oxidoreductases class-I active site. 38 48 - T 25-04-2016 IPR012999 Pyridine nucleotide-disulphide oxidoreductase, class I, active site GO:0016668|GO:0055114 RJP_RS06320 8123f94a373dd7815197a7c9e97ed6a2 459 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 131 149 3.9E-35 T 25-04-2016 RJP_RS06320 8123f94a373dd7815197a7c9e97ed6a2 459 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 6 25 3.9E-35 T 25-04-2016 RJP_RS06320 8123f94a373dd7815197a7c9e97ed6a2 459 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 285 307 3.9E-35 T 25-04-2016 RJP_RS06320 8123f94a373dd7815197a7c9e97ed6a2 459 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 257 273 3.9E-35 T 25-04-2016 RJP_RS06320 8123f94a373dd7815197a7c9e97ed6a2 459 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 170 188 3.9E-35 T 25-04-2016 RJP_RS06320 8123f94a373dd7815197a7c9e97ed6a2 459 PIRSF PIRSF000350 1 457 8.6E-83 T 25-04-2016 RJP_RS03290 3ce943221815c5644646b429c9e42ebf 653 Gene3D G3DSA:3.40.50.300 288 390 7.9E-67 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RJP_RS03290 3ce943221815c5644646b429c9e42ebf 653 Gene3D G3DSA:3.40.50.300 547 637 7.9E-67 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RJP_RS03290 3ce943221815c5644646b429c9e42ebf 653 PANTHER PTHR11070:SF7 1 648 7.9E-194 T 25-04-2016 RJP_RS03290 3ce943221815c5644646b429c9e42ebf 653 Gene3D G3DSA:1.10.486.10 391 535 1.3E-40 T 25-04-2016 RJP_RS03290 3ce943221815c5644646b429c9e42ebf 653 PANTHER PTHR11070 1 648 7.9E-194 T 25-04-2016 IPR000212 DNA helicase, UvrD/REP type GO:0003677|GO:0004003|GO:0005524 RJP_RS03290 3ce943221815c5644646b429c9e42ebf 653 TIGRFAM TIGR01073 pcrA: ATP-dependent DNA helicase PcrA 6 643 4.7E-292 T 25-04-2016 IPR005751 ATP-dependent DNA helicase PcrA GO:0004003|GO:0005737|GO:0006268 RJP_RS03290 3ce943221815c5644646b429c9e42ebf 653 Gene3D G3DSA:3.40.50.300 193 287 1.1E-66 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RJP_RS03290 3ce943221815c5644646b429c9e42ebf 653 Gene3D G3DSA:3.40.50.300 4 108 1.1E-66 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RJP_RS03290 3ce943221815c5644646b429c9e42ebf 653 Gene3D G3DSA:1.10.10.160 116 192 2.0E-18 T 25-04-2016 IPR013986 DExx box DNA helicase domain RJP_RS03290 3ce943221815c5644646b429c9e42ebf 653 Pfam PF00580 UvrD/REP helicase N-terminal domain 10 273 3.5E-75 T 25-04-2016 IPR014016 UvrD-like Helicase, ATP-binding domain GO:0005524 RJP_RS03290 3ce943221815c5644646b429c9e42ebf 653 SUPERFAMILY SSF52540 4 636 6.02E-166 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RJP_RS03290 3ce943221815c5644646b429c9e42ebf 653 Pfam PF13361 UvrD-like helicase C-terminal domain 279 613 1.2E-67 T 25-04-2016 IPR014017 UvrD-like DNA helicase, C-terminal GO:0005524|GO:0016787 RJP_RS02685 6986dac8fd82143512ee9c8b55d586f5 240 Gene3D G3DSA:3.40.50.300 4 221 4.1E-46 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RJP_RS02685 6986dac8fd82143512ee9c8b55d586f5 240 SUPERFAMILY SSF52540 2 222 9.19E-44 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RJP_RS02685 6986dac8fd82143512ee9c8b55d586f5 240 PANTHER PTHR24220 6 223 8.0E-48 T 25-04-2016 RJP_RS02685 6986dac8fd82143512ee9c8b55d586f5 240 SMART SM00382 31 228 1.9E-12 T 25-04-2016 IPR003593 AAA+ ATPase domain RJP_RS02685 6986dac8fd82143512ee9c8b55d586f5 240 PANTHER PTHR24220:SF534 6 223 8.0E-48 T 25-04-2016 RJP_RS02685 6986dac8fd82143512ee9c8b55d586f5 240 Pfam PF00005 ABC transporter 25 170 1.3E-24 T 25-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 RJP_RS04315 f74d571775f767d06a167e02fabd62ad 216 Gene3D G3DSA:1.20.144.10 16 90 1.1E-13 T 25-04-2016 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase RJP_RS04315 f74d571775f767d06a167e02fabd62ad 216 SUPERFAMILY SSF48317 15 90 8.9E-15 T 25-04-2016 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase RJP_RS04315 f74d571775f767d06a167e02fabd62ad 216 Pfam PF01569 PAP2 superfamily 18 90 4.3E-13 T 25-04-2016 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase RJP_RS02175 06887d1af3bf2af884508b46dba45ca3 144 PIRSF PIRSF005384 4 144 1.6E-53 T 25-04-2016 IPR003500 Sugar-phosphate isomerase, RpiB/LacA/LacB family GO:0005975|GO:0016853 KEGG: 00052+5.3.1.26|UniPathway: UPA00702 RJP_RS02175 06887d1af3bf2af884508b46dba45ca3 144 PANTHER PTHR30345 1 143 4.6E-50 T 25-04-2016 IPR003500 Sugar-phosphate isomerase, RpiB/LacA/LacB family GO:0005975|GO:0016853 KEGG: 00052+5.3.1.26|UniPathway: UPA00702 RJP_RS02175 06887d1af3bf2af884508b46dba45ca3 144 Gene3D G3DSA:3.40.1400.10 1 143 9.3E-54 T 25-04-2016 IPR003500 Sugar-phosphate isomerase, RpiB/LacA/LacB family GO:0005975|GO:0016853 KEGG: 00052+5.3.1.26|UniPathway: UPA00702 RJP_RS02175 06887d1af3bf2af884508b46dba45ca3 144 TIGRFAM TIGR00689 rpiB_lacA_lacB: sugar-phosphate isomerase, RpiB/LacA/LacB family 6 144 3.3E-62 T 25-04-2016 IPR003500 Sugar-phosphate isomerase, RpiB/LacA/LacB family GO:0005975|GO:0016853 KEGG: 00052+5.3.1.26|UniPathway: UPA00702 RJP_RS02175 06887d1af3bf2af884508b46dba45ca3 144 Pfam PF02502 Ribose/Galactose Isomerase 6 143 2.5E-47 T 25-04-2016 IPR003500 Sugar-phosphate isomerase, RpiB/LacA/LacB family GO:0005975|GO:0016853 KEGG: 00052+5.3.1.26|UniPathway: UPA00702 RJP_RS02175 06887d1af3bf2af884508b46dba45ca3 144 TIGRFAM TIGR01120 rpiB: ribose 5-phosphate isomerase B 6 143 1.2E-45 T 25-04-2016 IPR004785 Ribose 5-phosphate isomerase B GO:0004751|GO:0006098 RJP_RS02175 06887d1af3bf2af884508b46dba45ca3 144 SUPERFAMILY SSF89623 4 143 1.05E-48 T 25-04-2016 IPR003500 Sugar-phosphate isomerase, RpiB/LacA/LacB family GO:0005975|GO:0016853 KEGG: 00052+5.3.1.26|UniPathway: UPA00702 RJP_RS03845 095de2293aa9ba6fa1717c3e1f6d2d91 459 SUPERFAMILY SSF51905 1 315 1.1E-61 T 25-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RJP_RS03845 095de2293aa9ba6fa1717c3e1f6d2d91 459 PIRSF PIRSF000350 1 458 6.8E-89 T 25-04-2016 RJP_RS03845 095de2293aa9ba6fa1717c3e1f6d2d91 459 Gene3D G3DSA:3.30.390.30 328 456 1.7E-49 T 25-04-2016 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 RJP_RS03845 095de2293aa9ba6fa1717c3e1f6d2d91 459 TIGRFAM TIGR01350 lipoamide_DH: dihydrolipoyl dehydrogenase 3 459 1.2E-166 T 25-04-2016 IPR006258 Dihydrolipoamide dehydrogenase GO:0004148|GO:0050660|GO:0055114 KEGG: 00010+1.8.1.4|KEGG: 00020+1.8.1.4|KEGG: 00260+1.8.1.4|KEGG: 00280+1.8.1.4|KEGG: 00620+1.8.1.4|KEGG: 00640+1.8.1.4|MetaCyc: PWY-5046|MetaCyc: PWY-5084 RJP_RS03845 095de2293aa9ba6fa1717c3e1f6d2d91 459 Pfam PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain 340 449 4.7E-39 T 25-04-2016 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 RJP_RS03845 095de2293aa9ba6fa1717c3e1f6d2d91 459 Gene3D G3DSA:3.50.50.60 134 327 8.0E-51 T 25-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RJP_RS03845 095de2293aa9ba6fa1717c3e1f6d2d91 459 PANTHER PTHR22912 1 452 2.6E-283 T 25-04-2016 RJP_RS03845 095de2293aa9ba6fa1717c3e1f6d2d91 459 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 4 321 1.3E-66 T 25-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RJP_RS03845 095de2293aa9ba6fa1717c3e1f6d2d91 459 PANTHER PTHR22912:SF131 1 452 2.6E-283 T 25-04-2016 RJP_RS03845 095de2293aa9ba6fa1717c3e1f6d2d91 459 Gene3D G3DSA:3.50.50.60 2 133 2.0E-39 T 25-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RJP_RS03845 095de2293aa9ba6fa1717c3e1f6d2d91 459 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 170 195 9.1E-77 T 25-04-2016 RJP_RS03845 095de2293aa9ba6fa1717c3e1f6d2d91 459 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 401 416 9.1E-77 T 25-04-2016 RJP_RS03845 095de2293aa9ba6fa1717c3e1f6d2d91 459 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 336 357 9.1E-77 T 25-04-2016 RJP_RS03845 095de2293aa9ba6fa1717c3e1f6d2d91 459 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 258 272 9.1E-77 T 25-04-2016 RJP_RS03845 095de2293aa9ba6fa1717c3e1f6d2d91 459 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 301 308 9.1E-77 T 25-04-2016 RJP_RS03845 095de2293aa9ba6fa1717c3e1f6d2d91 459 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 423 443 9.1E-77 T 25-04-2016 RJP_RS03845 095de2293aa9ba6fa1717c3e1f6d2d91 459 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 5 27 9.1E-77 T 25-04-2016 RJP_RS03845 095de2293aa9ba6fa1717c3e1f6d2d91 459 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 134 143 9.1E-77 T 25-04-2016 RJP_RS03845 095de2293aa9ba6fa1717c3e1f6d2d91 459 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 38 53 9.1E-77 T 25-04-2016 RJP_RS03845 095de2293aa9ba6fa1717c3e1f6d2d91 459 SUPERFAMILY SSF55424 336 458 4.47E-43 T 25-04-2016 IPR016156 FAD/NAD-linked reductase, dimerisation domain GO:0016491|GO:0050660|GO:0055114 RJP_RS03845 095de2293aa9ba6fa1717c3e1f6d2d91 459 ProSitePatterns PS00076 Pyridine nucleotide-disulphide oxidoreductases class-I active site. 39 49 - T 25-04-2016 IPR012999 Pyridine nucleotide-disulphide oxidoreductase, class I, active site GO:0016668|GO:0055114 RJP_RS03845 095de2293aa9ba6fa1717c3e1f6d2d91 459 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 131 149 3.4E-36 T 25-04-2016 RJP_RS03845 095de2293aa9ba6fa1717c3e1f6d2d91 459 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 170 188 3.4E-36 T 25-04-2016 RJP_RS03845 095de2293aa9ba6fa1717c3e1f6d2d91 459 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 6 25 3.4E-36 T 25-04-2016 RJP_RS03845 095de2293aa9ba6fa1717c3e1f6d2d91 459 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 257 273 3.4E-36 T 25-04-2016 RJP_RS03845 095de2293aa9ba6fa1717c3e1f6d2d91 459 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 286 308 3.4E-36 T 25-04-2016 RJP_RS06930 1900b3ffe4790ad87cf4eb51330bc384 610 Pfam PF01119 DNA mismatch repair protein, C-terminal domain 213 329 1.1E-36 T 25-04-2016 IPR013507 DNA mismatch repair protein, C-terminal GO:0005524|GO:0006298|GO:0030983 RJP_RS06930 1900b3ffe4790ad87cf4eb51330bc384 610 SUPERFAMILY SSF118116 420 610 1.15E-51 T 25-04-2016 RJP_RS06930 1900b3ffe4790ad87cf4eb51330bc384 610 Pfam PF13589 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 24 124 2.7E-12 T 25-04-2016 RJP_RS06930 1900b3ffe4790ad87cf4eb51330bc384 610 SUPERFAMILY SSF55874 1 201 2.47E-49 T 25-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RJP_RS06930 1900b3ffe4790ad87cf4eb51330bc384 610 Gene3D G3DSA:3.30.565.10 1 203 2.7E-67 T 25-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RJP_RS06930 1900b3ffe4790ad87cf4eb51330bc384 610 Hamap MF_00149 DNA mismatch repair protein MutL [mutL]. 1 608 27.161 T 25-04-2016 IPR020667 DNA mismatch repair protein, MutL GO:0006298 RJP_RS06930 1900b3ffe4790ad87cf4eb51330bc384 610 ProSitePatterns PS00058 DNA mismatch repair proteins mutL / hexB / PMS1 signature. 92 98 - T 25-04-2016 IPR014762 DNA mismatch repair, conserved site RJP_RS06930 1900b3ffe4790ad87cf4eb51330bc384 610 SUPERFAMILY SSF54211 189 329 4.55E-35 T 25-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold RJP_RS06930 1900b3ffe4790ad87cf4eb51330bc384 610 PANTHER PTHR10073 3 608 2.1E-130 T 25-04-2016 RJP_RS06930 1900b3ffe4790ad87cf4eb51330bc384 610 SMART SM00853 424 568 2.1E-42 T 25-04-2016 IPR014790 MutL, C-terminal, dimerisation GO:0005524|GO:0006298 RJP_RS06930 1900b3ffe4790ad87cf4eb51330bc384 610 Gene3D G3DSA:3.30.230.10 204 329 7.8E-37 T 25-04-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup RJP_RS06930 1900b3ffe4790ad87cf4eb51330bc384 610 TIGRFAM TIGR00585 mutl: DNA mismatch repair protein MutL 1 310 4.6E-92 T 25-04-2016 IPR002099 DNA mismatch repair protein family GO:0005524|GO:0006298|GO:0030983 RJP_RS06930 1900b3ffe4790ad87cf4eb51330bc384 610 Pfam PF08676 MutL C terminal dimerisation domain 421 568 1.9E-45 T 25-04-2016 IPR014790 MutL, C-terminal, dimerisation GO:0005524|GO:0006298 RJP_RS06930 1900b3ffe4790ad87cf4eb51330bc384 610 SMART SM01340 212 330 1.5E-51 T 25-04-2016 IPR013507 DNA mismatch repair protein, C-terminal GO:0005524|GO:0006298|GO:0030983 RJP_RS06735 45453c233d150db669ce04f005951cb9 316 ProDom PD214932 TRANSMEMBRANE MEMBRANE RP853 15 316 5.0E-161 T 25-04-2016 IPR020180 Uncharacterised protein family RP853 RJP_RS01920 93b78742e1bc27b274786b8edaf5c37c 398 SUPERFAMILY SSF81342 15 276 5.81E-113 T 25-04-2016 IPR016174 Di-haem cytochrome, transmembrane GO:0016020|GO:0022904 RJP_RS01920 93b78742e1bc27b274786b8edaf5c37c 398 PANTHER PTHR19271:SF5 11 393 4.1E-236 T 25-04-2016 RJP_RS01920 93b78742e1bc27b274786b8edaf5c37c 398 Gene3D G3DSA:1.20.810.10 15 392 3.2E-178 T 25-04-2016 IPR027387 Cytochrome b/b6-like domain RJP_RS01920 93b78742e1bc27b274786b8edaf5c37c 398 Pfam PF00033 Cytochrome b/b6/petB 32 218 2.4E-80 T 25-04-2016 IPR016174 Di-haem cytochrome, transmembrane GO:0016020|GO:0022904 RJP_RS01920 93b78742e1bc27b274786b8edaf5c37c 398 PIRSF PIRSF038885 6 398 3.5E-201 T 25-04-2016 IPR030689 Cytochrome b GO:0006122|GO:0008121|GO:0009055|GO:0045275 RJP_RS01920 93b78742e1bc27b274786b8edaf5c37c 398 SUPERFAMILY SSF81648 277 394 1.18E-43 T 25-04-2016 IPR005798 Cytochrome b/b6, C-terminal GO:0009055|GO:0016020|GO:0016491 RJP_RS01920 93b78742e1bc27b274786b8edaf5c37c 398 PANTHER PTHR19271 11 393 4.1E-236 T 25-04-2016 RJP_RS01920 93b78742e1bc27b274786b8edaf5c37c 398 Pfam PF00032 Cytochrome b(C-terminal)/b6/petD 274 375 4.2E-44 T 25-04-2016 IPR005798 Cytochrome b/b6, C-terminal GO:0009055|GO:0016020|GO:0016491 RJP_RS00970 c81d3d4955c50c00385995848c69d4ff 145 ProDom PD001367 RIBOSOMAL RIBONUCLEOPROTEIN L11 RRNA-BINDING RNA-BINDING METHYLATION 50S L11 BACTERIAL CHLOROPLAST 38 75 4.0E-16 T 25-04-2016 RJP_RS00970 c81d3d4955c50c00385995848c69d4ff 145 TIGRFAM TIGR01632 L11_bact: ribosomal protein uL11 4 143 5.8E-62 T 25-04-2016 IPR006519 Ribosomal protein L11, bacterial-type GO:0003735|GO:0005840|GO:0006412 RJP_RS00970 c81d3d4955c50c00385995848c69d4ff 145 Gene3D G3DSA:3.30.1550.10 4 73 1.1E-30 T 25-04-2016 IPR020784 Ribosomal protein L11, N-terminal RJP_RS00970 c81d3d4955c50c00385995848c69d4ff 145 SUPERFAMILY SSF46906 69 142 2.22E-23 T 25-04-2016 IPR020783 Ribosomal protein L11, C-terminal GO:0003735|GO:0005840|GO:0006412 RJP_RS00970 c81d3d4955c50c00385995848c69d4ff 145 Pfam PF00298 Ribosomal protein L11, RNA binding domain 73 142 4.1E-22 T 25-04-2016 IPR020783 Ribosomal protein L11, C-terminal GO:0003735|GO:0005840|GO:0006412 RJP_RS00970 c81d3d4955c50c00385995848c69d4ff 145 PANTHER PTHR11661 8 143 1.7E-56 T 25-04-2016 IPR000911 Ribosomal protein L11/L12 GO:0003735|GO:0005840|GO:0006412 RJP_RS00970 c81d3d4955c50c00385995848c69d4ff 145 SMART SM00649 10 143 7.7E-74 T 25-04-2016 IPR000911 Ribosomal protein L11/L12 GO:0003735|GO:0005840|GO:0006412 RJP_RS00970 c81d3d4955c50c00385995848c69d4ff 145 ProSitePatterns PS00359 Ribosomal protein L11 signature. 129 144 - T 25-04-2016 IPR020785 Ribosomal protein L11, conserved site GO:0003735|GO:0005840|GO:0006412 RJP_RS00970 c81d3d4955c50c00385995848c69d4ff 145 Hamap MF_00736 50S ribosomal protein L11 [rplK]. 6 144 28.063 T 25-04-2016 IPR000911 Ribosomal protein L11/L12 GO:0003735|GO:0005840|GO:0006412 RJP_RS00970 c81d3d4955c50c00385995848c69d4ff 145 SUPERFAMILY SSF54747 4 74 2.35E-25 T 25-04-2016 IPR020784 Ribosomal protein L11, N-terminal RJP_RS00970 c81d3d4955c50c00385995848c69d4ff 145 Gene3D G3DSA:1.10.10.250 74 143 6.2E-27 T 25-04-2016 IPR020783 Ribosomal protein L11, C-terminal GO:0003735|GO:0005840|GO:0006412 RJP_RS00970 c81d3d4955c50c00385995848c69d4ff 145 Pfam PF03946 Ribosomal protein L11, N-terminal domain 10 68 4.8E-24 T 25-04-2016 IPR020784 Ribosomal protein L11, N-terminal RJP_RS05150 184ed513c6de725831411d5307a2fa01 118 Hamap MF_01337_B 50S ribosomal protein L18 [rplR]. 3 118 27.062 T 25-04-2016 IPR004389 Ribosomal protein L18, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 RJP_RS05150 184ed513c6de725831411d5307a2fa01 118 TIGRFAM TIGR00060 L18_bact: ribosomal protein uL18 9 115 4.7E-41 T 25-04-2016 IPR004389 Ribosomal protein L18, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 RJP_RS05150 184ed513c6de725831411d5307a2fa01 118 SUPERFAMILY SSF53137 7 114 1.96E-45 T 25-04-2016 RJP_RS05150 184ed513c6de725831411d5307a2fa01 118 PANTHER PTHR12899 1 114 1.9E-34 T 25-04-2016 RJP_RS05150 184ed513c6de725831411d5307a2fa01 118 Gene3D G3DSA:3.30.420.100 22 114 1.5E-35 T 25-04-2016 RJP_RS05150 184ed513c6de725831411d5307a2fa01 118 Pfam PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast 8 115 4.1E-42 T 25-04-2016 IPR005484 Ribosomal protein L18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RJP_RS00435 b00ca37b661aae8e72d4cdb4aa3435e6 560 PRINTS PR01900 YidC translocation/secretion protein signature 346 362 1.7E-24 T 25-04-2016 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 RJP_RS00435 b00ca37b661aae8e72d4cdb4aa3435e6 560 PRINTS PR01900 YidC translocation/secretion protein signature 513 537 1.7E-24 T 25-04-2016 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 RJP_RS00435 b00ca37b661aae8e72d4cdb4aa3435e6 560 PRINTS PR01900 YidC translocation/secretion protein signature 494 509 1.7E-24 T 25-04-2016 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 RJP_RS00435 b00ca37b661aae8e72d4cdb4aa3435e6 560 PANTHER PTHR12428 168 470 4.9E-74 T 25-04-2016 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 RJP_RS00435 b00ca37b661aae8e72d4cdb4aa3435e6 560 PANTHER PTHR12428 490 558 4.9E-74 T 25-04-2016 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 RJP_RS00435 b00ca37b661aae8e72d4cdb4aa3435e6 560 TIGRFAM TIGR03593 yidC_nterm: membrane protein insertase, YidC/Oxa1 family, N-terminal domain 7 359 6.4E-94 T 25-04-2016 IPR028053 Membrane insertase YidC, N-terminal RJP_RS00435 b00ca37b661aae8e72d4cdb4aa3435e6 560 PANTHER PTHR12428:SF14 168 470 4.9E-74 T 25-04-2016 RJP_RS00435 b00ca37b661aae8e72d4cdb4aa3435e6 560 PANTHER PTHR12428:SF14 490 558 4.9E-74 T 25-04-2016 RJP_RS00435 b00ca37b661aae8e72d4cdb4aa3435e6 560 PRINTS PR00701 60kDa inner membrane protein signature 331 351 1.0E-15 T 25-04-2016 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 RJP_RS00435 b00ca37b661aae8e72d4cdb4aa3435e6 560 PRINTS PR00701 60kDa inner membrane protein signature 250 265 1.0E-15 T 25-04-2016 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 RJP_RS00435 b00ca37b661aae8e72d4cdb4aa3435e6 560 PRINTS PR00701 60kDa inner membrane protein signature 422 445 1.0E-15 T 25-04-2016 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 RJP_RS00435 b00ca37b661aae8e72d4cdb4aa3435e6 560 Hamap MF_01810 Membrane protein insertase YidC [yidC]. 6 560 22.256 T 25-04-2016 IPR019998 Membrane insertase YidC GO:0016021|GO:0051205 RJP_RS00435 b00ca37b661aae8e72d4cdb4aa3435e6 560 Pfam PF02096 60Kd inner membrane protein 361 558 1.2E-60 T 25-04-2016 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 RJP_RS00435 b00ca37b661aae8e72d4cdb4aa3435e6 560 Pfam PF14849 YidC periplasmic domain 71 349 1.9E-72 T 25-04-2016 IPR028053 Membrane insertase YidC, N-terminal RJP_RS00435 b00ca37b661aae8e72d4cdb4aa3435e6 560 TIGRFAM TIGR03592 yidC_oxa1_cterm: membrane protein insertase, YidC/Oxa1 family 360 558 3.5E-69 T 25-04-2016 IPR028055 Membrane insertase YidC/Oxa1, C-terminal RJP_RS06540 64f425c8d70ebf7c9efc23784e1833d9 116 PANTHER PTHR11938 1 85 7.3E-26 T 25-04-2016 RJP_RS06540 64f425c8d70ebf7c9efc23784e1833d9 116 Gene3D G3DSA:1.10.1060.10 52 95 7.0E-8 T 25-04-2016 RJP_RS06540 64f425c8d70ebf7c9efc23784e1833d9 116 Gene3D G3DSA:3.30.70.20 3 51 8.7E-17 T 25-04-2016 RJP_RS06540 64f425c8d70ebf7c9efc23784e1833d9 116 SUPERFAMILY SSF54862 1 64 2.15E-20 T 25-04-2016 RJP_RS06540 64f425c8d70ebf7c9efc23784e1833d9 116 PRINTS PR00354 7Fe ferredoxin signature 9 19 9.1E-18 T 25-04-2016 IPR000813 7Fe ferredoxin GO:0009055 RJP_RS06540 64f425c8d70ebf7c9efc23784e1833d9 116 PRINTS PR00354 7Fe ferredoxin signature 19 29 9.1E-18 T 25-04-2016 IPR000813 7Fe ferredoxin GO:0009055 RJP_RS06540 64f425c8d70ebf7c9efc23784e1833d9 116 PRINTS PR00354 7Fe ferredoxin signature 39 56 9.1E-18 T 25-04-2016 IPR000813 7Fe ferredoxin GO:0009055 RJP_RS06540 64f425c8d70ebf7c9efc23784e1833d9 116 PANTHER PTHR11938:SF101 1 85 7.3E-26 T 25-04-2016 RJP_RS06540 64f425c8d70ebf7c9efc23784e1833d9 116 Pfam PF11953 Domain of unknown function (DUF3470) 80 108 2.0E-10 T 25-04-2016 IPR022569 Ferredoxin, C-terminal RJP_RS06540 64f425c8d70ebf7c9efc23784e1833d9 116 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 44 55 - T 25-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site RJP_RS06540 64f425c8d70ebf7c9efc23784e1833d9 116 Pfam PF12838 4Fe-4S dicluster domain 9 58 3.6E-7 T 25-04-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain RJP_RS06655 a4de78ee5a633a93f95af94913b5cc18 330 ProSitePatterns PS00905 GTP1/OBG family signature. 212 225 - T 25-04-2016 IPR006074 GTP1/OBG, conserved site GO:0005525 RJP_RS06655 a4de78ee5a633a93f95af94913b5cc18 330 Gene3D G3DSA:3.40.50.300 161 327 4.7E-52 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RJP_RS06655 a4de78ee5a633a93f95af94913b5cc18 330 SUPERFAMILY SSF52540 161 327 3.18E-49 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RJP_RS06655 a4de78ee5a633a93f95af94913b5cc18 330 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 162 321 4.8E-12 T 25-04-2016 IPR005225 Small GTP-binding protein domain GO:0005525 RJP_RS06655 a4de78ee5a633a93f95af94913b5cc18 330 PANTHER PTHR11702 1 329 9.1E-149 T 25-04-2016 RJP_RS06655 a4de78ee5a633a93f95af94913b5cc18 330 Hamap MF_01454 GTPase Obg [obg]. 2 327 45.849 T 25-04-2016 IPR014100 GTP-binding protein Obg/CgtA GO:0000287|GO:0003924|GO:0005525 RJP_RS06655 a4de78ee5a633a93f95af94913b5cc18 330 Pfam PF01926 50S ribosome-binding GTPase 161 280 6.2E-25 T 25-04-2016 IPR006073 GTP binding domain GO:0005525 RJP_RS06655 a4de78ee5a633a93f95af94913b5cc18 330 SUPERFAMILY SSF82051 2 158 9.02E-54 T 25-04-2016 IPR006169 GTP1/OBG domain GO:0005525 RJP_RS06655 a4de78ee5a633a93f95af94913b5cc18 330 Gene3D G3DSA:2.70.210.12 2 155 6.4E-54 T 25-04-2016 IPR006169 GTP1/OBG domain GO:0005525 RJP_RS06655 a4de78ee5a633a93f95af94913b5cc18 330 Pfam PF01018 GTP1/OBG 3 158 5.9E-58 T 25-04-2016 IPR006169 GTP1/OBG domain GO:0005525 RJP_RS06655 a4de78ee5a633a93f95af94913b5cc18 330 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 227 245 1.4E-36 T 25-04-2016 IPR006073 GTP binding domain GO:0005525 RJP_RS06655 a4de78ee5a633a93f95af94913b5cc18 330 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 183 201 1.4E-36 T 25-04-2016 IPR006073 GTP binding domain GO:0005525 RJP_RS06655 a4de78ee5a633a93f95af94913b5cc18 330 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 162 182 1.4E-36 T 25-04-2016 IPR006073 GTP binding domain GO:0005525 RJP_RS06655 a4de78ee5a633a93f95af94913b5cc18 330 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 210 225 1.4E-36 T 25-04-2016 IPR006073 GTP binding domain GO:0005525 RJP_RS06655 a4de78ee5a633a93f95af94913b5cc18 330 PIRSF PIRSF002401 1 330 1.1E-133 T 25-04-2016 IPR014100 GTP-binding protein Obg/CgtA GO:0000287|GO:0003924|GO:0005525 RJP_RS06655 a4de78ee5a633a93f95af94913b5cc18 330 TIGRFAM TIGR02729 Obg_CgtA: Obg family GTPase CgtA 3 325 3.8E-139 T 25-04-2016 IPR014100 GTP-binding protein Obg/CgtA GO:0000287|GO:0003924|GO:0005525 RJP_RS06655 a4de78ee5a633a93f95af94913b5cc18 330 PANTHER PTHR11702:SF3 1 329 9.1E-149 T 25-04-2016 IPR014100 GTP-binding protein Obg/CgtA GO:0000287|GO:0003924|GO:0005525 RJP_RS01405 c05f1934a294ad84d793192a5fe9ff98 595 PANTHER PTHR19375 19 549 2.7E-157 T 25-04-2016 RJP_RS01405 c05f1934a294ad84d793192a5fe9ff98 595 SUPERFAMILY SSF100920 363 515 1.57E-47 T 25-04-2016 IPR029047 Heat shock protein 70kD, peptide-binding domain RJP_RS01405 c05f1934a294ad84d793192a5fe9ff98 595 Gene3D G3DSA:1.20.1270.10 518 571 3.4E-5 T 25-04-2016 IPR029048 Heat shock protein 70kD, C-terminal domain RJP_RS01405 c05f1934a294ad84d793192a5fe9ff98 595 Gene3D G3DSA:3.30.420.40 204 336 2.3E-28 T 25-04-2016 RJP_RS01405 c05f1934a294ad84d793192a5fe9ff98 595 Hamap MF_00679 Chaperone protein HscA [hscA]. 1 594 36.307 T 25-04-2016 IPR010236 ISC system FeS cluster assembly, HscA chaperone GO:0005524|GO:0006457|GO:0016226|GO:0016887|GO:0051082 RJP_RS01405 c05f1934a294ad84d793192a5fe9ff98 595 SUPERFAMILY SSF53067 20 189 1.24E-37 T 25-04-2016 RJP_RS01405 c05f1934a294ad84d793192a5fe9ff98 595 ProSitePatterns PS01036 Heat shock hsp70 proteins family signature 3. 312 326 - T 25-04-2016 IPR018181 Heat shock protein 70, conserved site RJP_RS01405 c05f1934a294ad84d793192a5fe9ff98 595 Gene3D G3DSA:3.30.420.40 20 83 1.2E-46 T 25-04-2016 RJP_RS01405 c05f1934a294ad84d793192a5fe9ff98 595 Gene3D G3DSA:3.30.420.40 125 203 1.2E-46 T 25-04-2016 RJP_RS01405 c05f1934a294ad84d793192a5fe9ff98 595 Gene3D G3DSA:2.60.34.10 346 517 1.8E-54 T 25-04-2016 IPR029047 Heat shock protein 70kD, peptide-binding domain RJP_RS01405 c05f1934a294ad84d793192a5fe9ff98 595 PRINTS PR00301 70kDa heat shock protein signature 20 33 3.1E-36 T 25-04-2016 IPR013126 Heat shock protein 70 family RJP_RS01405 c05f1934a294ad84d793192a5fe9ff98 595 PRINTS PR00301 70kDa heat shock protein signature 444 460 3.1E-36 T 25-04-2016 IPR013126 Heat shock protein 70 family RJP_RS01405 c05f1934a294ad84d793192a5fe9ff98 595 PRINTS PR00301 70kDa heat shock protein signature 340 360 3.1E-36 T 25-04-2016 IPR013126 Heat shock protein 70 family RJP_RS01405 c05f1934a294ad84d793192a5fe9ff98 595 PRINTS PR00301 70kDa heat shock protein signature 309 325 3.1E-36 T 25-04-2016 IPR013126 Heat shock protein 70 family RJP_RS01405 c05f1934a294ad84d793192a5fe9ff98 595 PRINTS PR00301 70kDa heat shock protein signature 363 382 3.1E-36 T 25-04-2016 IPR013126 Heat shock protein 70 family RJP_RS01405 c05f1934a294ad84d793192a5fe9ff98 595 PRINTS PR00301 70kDa heat shock protein signature 144 164 3.1E-36 T 25-04-2016 IPR013126 Heat shock protein 70 family RJP_RS01405 c05f1934a294ad84d793192a5fe9ff98 595 SUPERFAMILY SSF53067 192 356 9.02E-41 T 25-04-2016 RJP_RS01405 c05f1934a294ad84d793192a5fe9ff98 595 Pfam PF00012 Hsp70 protein 21 573 7.2E-130 T 25-04-2016 IPR013126 Heat shock protein 70 family RJP_RS01405 c05f1934a294ad84d793192a5fe9ff98 595 SUPERFAMILY SSF100934 483 592 1.06E-16 T 25-04-2016 IPR029048 Heat shock protein 70kD, C-terminal domain RJP_RS01405 c05f1934a294ad84d793192a5fe9ff98 595 ProSitePatterns PS00329 Heat shock hsp70 proteins family signature 2. 197 210 - T 25-04-2016 IPR018181 Heat shock protein 70, conserved site RJP_RS00640 e0b82ec80e797ad205b3fef5a344c223 1806 SMART SM00869 1531 1796 1.4E-19 T 25-04-2016 IPR005546 Autotransporter beta-domain RJP_RS00640 e0b82ec80e797ad205b3fef5a344c223 1806 Pfam PF03797 Autotransporter beta-domain 1531 1789 4.1E-36 T 25-04-2016 IPR005546 Autotransporter beta-domain RJP_RS00640 e0b82ec80e797ad205b3fef5a344c223 1806 SUPERFAMILY SSF103515 1530 1804 1.7E-29 T 25-04-2016 IPR005546 Autotransporter beta-domain RJP_RS00640 e0b82ec80e797ad205b3fef5a344c223 1806 Gene3D G3DSA:2.40.128.130 1531 1804 3.2E-23 T 25-04-2016 IPR005546 Autotransporter beta-domain RJP_RS06460 f165e3e77a212e760078ca936fdb9141 95 Gene3D G3DSA:1.25.40.10 30 91 6.1E-4 T 25-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 RJP_RS06460 f165e3e77a212e760078ca936fdb9141 95 Pfam PF09361 Phasin protein 25 92 3.9E-8 T 25-04-2016 IPR018968 Phasin RJP_RS06445 706cd191a6b0940e6e6ecdfab75a4c28 215 PIRSF PIRSF006305 1 201 8.5E-48 T 25-04-2016 IPR003697 Maf-like protein GO:0005737 RJP_RS06445 706cd191a6b0940e6e6ecdfab75a4c28 215 SUPERFAMILY SSF52972 7 194 3.34E-52 T 25-04-2016 IPR029001 Inosine triphosphate pyrophosphatase-like RJP_RS06445 706cd191a6b0940e6e6ecdfab75a4c28 215 Pfam PF02545 Maf-like protein 10 195 6.4E-47 T 25-04-2016 IPR003697 Maf-like protein GO:0005737 RJP_RS06445 706cd191a6b0940e6e6ecdfab75a4c28 215 Gene3D G3DSA:3.90.950.10 8 198 7.9E-56 T 25-04-2016 IPR029001 Inosine triphosphate pyrophosphatase-like RJP_RS06445 706cd191a6b0940e6e6ecdfab75a4c28 215 TIGRFAM TIGR00172 maf: septum formation protein Maf 9 193 3.0E-41 T 25-04-2016 IPR003697 Maf-like protein GO:0005737 RJP_RS06445 706cd191a6b0940e6e6ecdfab75a4c28 215 Hamap MF_00528 Septum formation protein Maf [maf]. 9 200 29.508 T 25-04-2016 IPR003697 Maf-like protein GO:0005737 RJP_RS00550 6e51add11d4173b7a7a798a63cb645be 384 TIGRFAM TIGR01353 dGTP_triPase: putative dGTPase 25 377 7.0E-113 T 25-04-2016 IPR006261 Deoxyguanosinetriphosphate triphosphohydrolase GO:0000287|GO:0008832|GO:0046039 RJP_RS00550 6e51add11d4173b7a7a798a63cb645be 384 Pfam PF01966 HD domain 62 196 1.7E-16 T 25-04-2016 IPR006674 HD domain RJP_RS00550 6e51add11d4173b7a7a798a63cb645be 384 Hamap MF_01212 Deoxyguanosinetriphosphate triphosphohydrolase-like protein. 2 376 37.206 T 25-04-2016 IPR023023 Deoxyguanosinetriphosphate triphosphohydrolase, type 2 RJP_RS00550 6e51add11d4173b7a7a798a63cb645be 384 PANTHER PTHR11373:SF25 1 372 2.1E-76 T 25-04-2016 RJP_RS00550 6e51add11d4173b7a7a798a63cb645be 384 SMART SM00471 58 207 6.4E-12 T 25-04-2016 IPR003607 HD/PDEase domain RJP_RS00550 6e51add11d4173b7a7a798a63cb645be 384 PANTHER PTHR11373 1 372 2.1E-76 T 25-04-2016 RJP_RS00550 6e51add11d4173b7a7a798a63cb645be 384 Gene3D G3DSA:1.10.3210.10 21 216 1.0E-81 T 25-04-2016 IPR006674 HD domain RJP_RS00550 6e51add11d4173b7a7a798a63cb645be 384 Gene3D G3DSA:1.10.3210.10 273 378 1.0E-81 T 25-04-2016 IPR006674 HD domain RJP_RS00550 6e51add11d4173b7a7a798a63cb645be 384 SUPERFAMILY SSF109604 13 380 8.53E-85 T 25-04-2016 RJP_RS00550 6e51add11d4173b7a7a798a63cb645be 384 Pfam PF13286 Phosphohydrolase-associated domain 285 373 4.5E-23 T 25-04-2016 IPR026875 Phosphohydrolase-associated domain RJP_RS05005 810dcad186d0d2e16f55f0e75a79c6ce 211 PANTHER PTHR13707 3 209 7.0E-120 T 25-04-2016 IPR004165 Coenzyme A transferase family I GO:0008152|GO:0008410 RJP_RS05005 810dcad186d0d2e16f55f0e75a79c6ce 211 Pfam PF01144 Coenzyme A transferase 9 200 2.1E-39 T 25-04-2016 IPR004165 Coenzyme A transferase family I GO:0008152|GO:0008410 RJP_RS05005 810dcad186d0d2e16f55f0e75a79c6ce 211 Gene3D G3DSA:3.40.810.20 4 209 4.5E-88 T 25-04-2016 RJP_RS05005 810dcad186d0d2e16f55f0e75a79c6ce 211 TIGRFAM TIGR02428 pcaJ_scoB_fam: 3-oxoacid CoA-transferase, B subunit 3 209 2.6E-96 T 25-04-2016 IPR012791 3-oxoacid CoA-transferase, subunit B GO:0008410 RJP_RS05005 810dcad186d0d2e16f55f0e75a79c6ce 211 SUPERFAMILY SSF100950 3 210 8.7E-70 T 25-04-2016 RJP_RS05005 810dcad186d0d2e16f55f0e75a79c6ce 211 SMART SM00882 6 202 1.3E-72 T 25-04-2016 IPR004165 Coenzyme A transferase family I GO:0008152|GO:0008410 RJP_RS00185 8f0b0c8c1cecb850007ef97032e311d8 242 PANTHER PTHR11410:SF6 5 242 4.4E-94 T 25-04-2016 RJP_RS00185 8f0b0c8c1cecb850007ef97032e311d8 242 PANTHER PTHR11410 5 242 4.4E-94 T 25-04-2016 IPR000568 ATPase, F0 complex, subunit A GO:0015078|GO:0015986 RJP_RS00185 8f0b0c8c1cecb850007ef97032e311d8 242 SUPERFAMILY SSF81336 80 236 1.83E-47 T 25-04-2016 IPR000568 ATPase, F0 complex, subunit A GO:0015078|GO:0015986 RJP_RS00185 8f0b0c8c1cecb850007ef97032e311d8 242 Gene3D G3DSA:1.20.120.220 80 242 3.3E-50 T 25-04-2016 IPR000568 ATPase, F0 complex, subunit A GO:0015078|GO:0015986 RJP_RS00185 8f0b0c8c1cecb850007ef97032e311d8 242 Pfam PF00119 ATP synthase A chain 31 235 2.8E-52 T 25-04-2016 IPR000568 ATPase, F0 complex, subunit A GO:0015078|GO:0015986 RJP_RS00185 8f0b0c8c1cecb850007ef97032e311d8 242 ProSitePatterns PS00449 ATP synthase a subunit signature. 171 180 - T 25-04-2016 IPR023011 ATPase, F0 complex, subunit A, active site RJP_RS00185 8f0b0c8c1cecb850007ef97032e311d8 242 PRINTS PR00123 ATP synthase A subunit signature 87 103 4.8E-33 T 25-04-2016 IPR000568 ATPase, F0 complex, subunit A GO:0015078|GO:0015986 RJP_RS00185 8f0b0c8c1cecb850007ef97032e311d8 242 PRINTS PR00123 ATP synthase A subunit signature 168 190 4.8E-33 T 25-04-2016 IPR000568 ATPase, F0 complex, subunit A GO:0015078|GO:0015986 RJP_RS00185 8f0b0c8c1cecb850007ef97032e311d8 242 PRINTS PR00123 ATP synthase A subunit signature 222 237 4.8E-33 T 25-04-2016 IPR000568 ATPase, F0 complex, subunit A GO:0015078|GO:0015986 RJP_RS00185 8f0b0c8c1cecb850007ef97032e311d8 242 PRINTS PR00123 ATP synthase A subunit signature 148 163 4.8E-33 T 25-04-2016 IPR000568 ATPase, F0 complex, subunit A GO:0015078|GO:0015986 RJP_RS00185 8f0b0c8c1cecb850007ef97032e311d8 242 Hamap MF_01393 ATP synthase subunit a [atpB]. 7 242 16.084 T 25-04-2016 IPR000568 ATPase, F0 complex, subunit A GO:0015078|GO:0015986 RJP_RS00185 8f0b0c8c1cecb850007ef97032e311d8 242 TIGRFAM TIGR01131 ATP_synt_6_or_A: ATP synthase F0, A subunit 6 239 9.3E-73 T 25-04-2016 IPR000568 ATPase, F0 complex, subunit A GO:0015078|GO:0015986 RJP_RS03585 05bfd569e1c5416a0cbf63671cb797f8 209 Pfam PF02777 Iron/manganese superoxide dismutases, C-terminal domain 105 205 4.5E-39 T 25-04-2016 IPR019832 Manganese/iron superoxide dismutase, C-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 RJP_RS03585 05bfd569e1c5416a0cbf63671cb797f8 209 Pfam PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain 14 97 5.4E-26 T 25-04-2016 IPR019831 Manganese/iron superoxide dismutase, N-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 RJP_RS03585 05bfd569e1c5416a0cbf63671cb797f8 209 PIRSF PIRSF000349 1 209 4.7E-81 T 25-04-2016 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 RJP_RS03585 05bfd569e1c5416a0cbf63671cb797f8 209 PANTHER PTHR11404:SF8 9 207 2.0E-104 T 25-04-2016 RJP_RS03585 05bfd569e1c5416a0cbf63671cb797f8 209 PRINTS PR01703 Manganese superoxide dismutase signature 38 51 1.0E-21 T 25-04-2016 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 RJP_RS03585 05bfd569e1c5416a0cbf63671cb797f8 209 PRINTS PR01703 Manganese superoxide dismutase signature 81 94 1.0E-21 T 25-04-2016 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 RJP_RS03585 05bfd569e1c5416a0cbf63671cb797f8 209 PRINTS PR01703 Manganese superoxide dismutase signature 17 28 1.0E-21 T 25-04-2016 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 RJP_RS03585 05bfd569e1c5416a0cbf63671cb797f8 209 PRINTS PR01703 Manganese superoxide dismutase signature 134 142 1.0E-21 T 25-04-2016 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 RJP_RS03585 05bfd569e1c5416a0cbf63671cb797f8 209 PRINTS PR01703 Manganese superoxide dismutase signature 170 182 1.0E-21 T 25-04-2016 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 RJP_RS03585 05bfd569e1c5416a0cbf63671cb797f8 209 SUPERFAMILY SSF46609 6 99 2.62E-30 T 25-04-2016 IPR019831 Manganese/iron superoxide dismutase, N-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 RJP_RS03585 05bfd569e1c5416a0cbf63671cb797f8 209 SUPERFAMILY SSF54719 101 207 7.59E-45 T 25-04-2016 IPR019832 Manganese/iron superoxide dismutase, C-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 RJP_RS03585 05bfd569e1c5416a0cbf63671cb797f8 209 PANTHER PTHR11404 9 207 2.0E-104 T 25-04-2016 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 RJP_RS03585 05bfd569e1c5416a0cbf63671cb797f8 209 ProSitePatterns PS00088 Manganese and iron superoxide dismutases signature. 172 179 - T 25-04-2016 IPR019833 Manganese/iron superoxide dismutase, binding site GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 RJP_RS03585 05bfd569e1c5416a0cbf63671cb797f8 209 Gene3D G3DSA:1.10.287.990 33 97 4.1E-22 T 25-04-2016 RJP_RS02590 511c8ba2171827aa14b5e0a71b5cc353 167 PIRSF PIRSF000216 1 167 2.5E-75 T 25-04-2016 IPR002023 NADH-quinone oxidoreductase subunit E-like GO:0016491|GO:0055114 RJP_RS02590 511c8ba2171827aa14b5e0a71b5cc353 167 PANTHER PTHR10371:SF3 2 167 8.6E-96 T 25-04-2016 RJP_RS02590 511c8ba2171827aa14b5e0a71b5cc353 167 SUPERFAMILY SSF52833 10 166 1.68E-56 T 25-04-2016 IPR012336 Thioredoxin-like fold RJP_RS02590 511c8ba2171827aa14b5e0a71b5cc353 167 ProSitePatterns PS01099 Respiratory-chain NADH dehydrogenase 24 Kd subunit signature. 122 140 - T 25-04-2016 IPR002023 NADH-quinone oxidoreductase subunit E-like GO:0016491|GO:0055114 RJP_RS02590 511c8ba2171827aa14b5e0a71b5cc353 167 Pfam PF01257 Thioredoxin-like [2Fe-2S] ferredoxin 19 165 2.9E-63 T 25-04-2016 RJP_RS02590 511c8ba2171827aa14b5e0a71b5cc353 167 Gene3D G3DSA:3.40.30.10 85 163 2.3E-12 T 25-04-2016 IPR012336 Thioredoxin-like fold RJP_RS02590 511c8ba2171827aa14b5e0a71b5cc353 167 TIGRFAM TIGR01958 nuoE_fam: NADH-quinone oxidoreductase, E subunit 18 165 9.1E-65 T 25-04-2016 IPR002023 NADH-quinone oxidoreductase subunit E-like GO:0016491|GO:0055114 RJP_RS02590 511c8ba2171827aa14b5e0a71b5cc353 167 PANTHER PTHR10371 2 167 8.6E-96 T 25-04-2016 RJP_RS02195 220d5a0115423e6c7fcca1578e960ff3 444 Hamap MF_00671 Protein TolB [tolB]. 2 439 33.305 T 25-04-2016 IPR014167 Tol-Pal system beta propeller repeat-containing protein, TolB GO:0017038|GO:0042597 RJP_RS02195 220d5a0115423e6c7fcca1578e960ff3 444 Gene3D G3DSA:2.130.10.10 152 440 1.1E-71 T 25-04-2016 IPR015943 WD40/YVTN repeat-like-containing domain GO:0005515 RJP_RS02195 220d5a0115423e6c7fcca1578e960ff3 444 Pfam PF04052 TolB amino-terminal domain 22 128 1.0E-26 T 25-04-2016 IPR007195 TolB, N-terminal GO:0015031|GO:0042597 RJP_RS02195 220d5a0115423e6c7fcca1578e960ff3 444 Pfam PF07676 WD40-like Beta Propeller Repeat 377 400 0.23 T 25-04-2016 IPR011659 WD40-like Beta Propeller RJP_RS02195 220d5a0115423e6c7fcca1578e960ff3 444 Pfam PF07676 WD40-like Beta Propeller Repeat 325 349 3.2E-4 T 25-04-2016 IPR011659 WD40-like Beta Propeller RJP_RS02195 220d5a0115423e6c7fcca1578e960ff3 444 Pfam PF07676 WD40-like Beta Propeller Repeat 282 316 3.8E-12 T 25-04-2016 IPR011659 WD40-like Beta Propeller RJP_RS02195 220d5a0115423e6c7fcca1578e960ff3 444 Pfam PF07676 WD40-like Beta Propeller Repeat 242 271 3.8E-4 T 25-04-2016 IPR011659 WD40-like Beta Propeller RJP_RS02195 220d5a0115423e6c7fcca1578e960ff3 444 Gene3D G3DSA:3.40.50.10070 22 151 2.4E-42 T 25-04-2016 IPR007195 TolB, N-terminal GO:0015031|GO:0042597 RJP_RS02195 220d5a0115423e6c7fcca1578e960ff3 444 SUPERFAMILY SSF69304 153 440 3.4E-51 T 25-04-2016 RJP_RS02195 220d5a0115423e6c7fcca1578e960ff3 444 PANTHER PTHR36842 4 444 5.4E-43 T 25-04-2016 RJP_RS02195 220d5a0115423e6c7fcca1578e960ff3 444 SUPERFAMILY SSF52964 28 160 2.35E-32 T 25-04-2016 IPR007195 TolB, N-terminal GO:0015031|GO:0042597 RJP_RS02195 220d5a0115423e6c7fcca1578e960ff3 444 TIGRFAM TIGR02800 propeller_TolB: Tol-Pal system beta propeller repeat protein TolB 14 440 9.8E-124 T 25-04-2016 IPR014167 Tol-Pal system beta propeller repeat-containing protein, TolB GO:0017038|GO:0042597 RJP_RS02460 2a64f5a28ee518345d85a34fe07b59e1 341 SUPERFAMILY SSF51735 1 265 6.57E-51 T 25-04-2016 IPR016040 NAD(P)-binding domain RJP_RS02460 2a64f5a28ee518345d85a34fe07b59e1 341 PANTHER PTHR10366:SF360 6 263 4.2E-162 T 25-04-2016 RJP_RS02460 2a64f5a28ee518345d85a34fe07b59e1 341 PANTHER PTHR10366:SF360 282 334 4.2E-162 T 25-04-2016 RJP_RS02460 2a64f5a28ee518345d85a34fe07b59e1 341 Pfam PF02719 Polysaccharide biosynthesis protein 7 285 1.1E-101 T 25-04-2016 IPR003869 Polysaccharide biosynthesis protein, CapD-like domain RJP_RS02460 2a64f5a28ee518345d85a34fe07b59e1 341 Gene3D G3DSA:3.40.50.720 5 182 2.3E-38 T 25-04-2016 IPR016040 NAD(P)-binding domain RJP_RS02460 2a64f5a28ee518345d85a34fe07b59e1 341 PANTHER PTHR10366 6 263 4.2E-162 T 25-04-2016 RJP_RS02460 2a64f5a28ee518345d85a34fe07b59e1 341 PANTHER PTHR10366 282 334 4.2E-162 T 25-04-2016 RJP_RS02460 2a64f5a28ee518345d85a34fe07b59e1 341 Pfam PF08485 Polysaccharide biosynthesis protein C-terminal 288 335 6.7E-24 T 25-04-2016 IPR013692 UDP-glucose 4-epimerase CapD, C-terminal domain GO:0003978|GO:0009103 KEGG: 00052+5.1.3.2|KEGG: 00520+5.1.3.2|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6397|MetaCyc: PWY-6527|MetaCyc: PWY-7328|MetaCyc: PWY-7344 RJP_RS02460 2a64f5a28ee518345d85a34fe07b59e1 341 Gene3D G3DSA:3.90.25.10 183 264 3.2E-8 T 25-04-2016 RJP_RS02190 ff7595cc9e95037f339dfafd2f4feba1 294 Pfam PF02511 Thymidylate synthase complementing protein 30 241 3.7E-57 T 25-04-2016 IPR003669 Thymidylate synthase ThyX GO:0006231|GO:0050660|GO:0050797 KEGG: 00240+2.1.1.148|KEGG: 00270+2.1.1.14|KEGG: 00450+2.1.1.14|KEGG: 00670+2.1.1.148|MetaCyc: PWY-5041|MetaCyc: PWY-6151|MetaCyc: PWY-6545|MetaCyc: PWY-6936|MetaCyc: PWY-702 RJP_RS02190 ff7595cc9e95037f339dfafd2f4feba1 294 SUPERFAMILY SSF69796 20 255 5.23E-72 T 25-04-2016 IPR003669 Thymidylate synthase ThyX GO:0006231|GO:0050660|GO:0050797 KEGG: 00240+2.1.1.148|KEGG: 00270+2.1.1.14|KEGG: 00450+2.1.1.14|KEGG: 00670+2.1.1.148|MetaCyc: PWY-5041|MetaCyc: PWY-6151|MetaCyc: PWY-6545|MetaCyc: PWY-6936|MetaCyc: PWY-702 RJP_RS02190 ff7595cc9e95037f339dfafd2f4feba1 294 Hamap MF_01408 Thymidylate synthase ThyX [thyX]. 24 255 29.835 T 25-04-2016 IPR003669 Thymidylate synthase ThyX GO:0006231|GO:0050660|GO:0050797 KEGG: 00240+2.1.1.148|KEGG: 00270+2.1.1.14|KEGG: 00450+2.1.1.14|KEGG: 00670+2.1.1.148|MetaCyc: PWY-5041|MetaCyc: PWY-6151|MetaCyc: PWY-6545|MetaCyc: PWY-6936|MetaCyc: PWY-702 RJP_RS02190 ff7595cc9e95037f339dfafd2f4feba1 294 TIGRFAM TIGR02170 thyX: thymidylate synthase, flavin-dependent 28 247 6.2E-72 T 25-04-2016 IPR003669 Thymidylate synthase ThyX GO:0006231|GO:0050660|GO:0050797 KEGG: 00240+2.1.1.148|KEGG: 00270+2.1.1.14|KEGG: 00450+2.1.1.14|KEGG: 00670+2.1.1.148|MetaCyc: PWY-5041|MetaCyc: PWY-6151|MetaCyc: PWY-6545|MetaCyc: PWY-6936|MetaCyc: PWY-702 RJP_RS02190 ff7595cc9e95037f339dfafd2f4feba1 294 PANTHER PTHR34934 22 293 7.3E-53 T 25-04-2016 RJP_RS06140 d21da026893ea5c9b10abd4a4815dac1 303 Pfam PF00448 SRP54-type protein, GTPase domain 102 302 3.2E-74 T 25-04-2016 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: REACT_15380 RJP_RS06140 d21da026893ea5c9b10abd4a4815dac1 303 TIGRFAM TIGR00064 ftsY: signal recognition particle-docking protein FtsY 32 301 3.9E-104 T 25-04-2016 IPR004390 Signal-recognition particle receptor FtsY GO:0006614 RJP_RS06140 d21da026893ea5c9b10abd4a4815dac1 303 SMART SM00962 101 302 3.2E-106 T 25-04-2016 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: REACT_15380 RJP_RS06140 d21da026893ea5c9b10abd4a4815dac1 303 Gene3D G3DSA:1.20.120.140 3 81 1.3E-17 T 25-04-2016 RJP_RS06140 d21da026893ea5c9b10abd4a4815dac1 303 ProSitePatterns PS00300 SRP54-type proteins GTP-binding domain signature. 275 288 - T 25-04-2016 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: REACT_15380 RJP_RS06140 d21da026893ea5c9b10abd4a4815dac1 303 Gene3D G3DSA:3.40.50.300 95 302 8.5E-75 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RJP_RS06140 d21da026893ea5c9b10abd4a4815dac1 303 SMART SM00382 100 292 1.2E-7 T 25-04-2016 IPR003593 AAA+ ATPase domain RJP_RS06140 d21da026893ea5c9b10abd4a4815dac1 303 PANTHER PTHR11564:SF16 1 301 3.8E-107 T 25-04-2016 RJP_RS06140 d21da026893ea5c9b10abd4a4815dac1 303 Pfam PF02881 SRP54-type protein, helical bundle domain 17 80 2.1E-8 T 25-04-2016 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: REACT_15380 RJP_RS06140 d21da026893ea5c9b10abd4a4815dac1 303 SMART SM00963 8 87 7.5E-15 T 25-04-2016 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: REACT_15380 RJP_RS06140 d21da026893ea5c9b10abd4a4815dac1 303 SUPERFAMILY SSF52540 98 302 1.72E-48 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RJP_RS06140 d21da026893ea5c9b10abd4a4815dac1 303 SUPERFAMILY SSF47364 3 80 2.36E-17 T 25-04-2016 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: REACT_15380 RJP_RS06140 d21da026893ea5c9b10abd4a4815dac1 303 PANTHER PTHR11564 1 301 3.8E-107 T 25-04-2016 RJP_RS06140 d21da026893ea5c9b10abd4a4815dac1 303 Hamap MF_00920 Signal recognition particle receptor FtsY [ftsY]. 31 302 59.106 T 25-04-2016 IPR004390 Signal-recognition particle receptor FtsY GO:0006614 RJP_RS02080 eb69405cdfe28194459e938c855301f3 433 Pfam PF00361 Proton-conducting membrane transporter 137 405 1.8E-27 T 25-04-2016 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit Reactome: REACT_6305 RJP_RS02080 eb69405cdfe28194459e938c855301f3 433 PANTHER PTHR22773:SF49 1 431 2.0E-49 T 25-04-2016 RJP_RS02080 eb69405cdfe28194459e938c855301f3 433 PANTHER PTHR22773 1 431 2.0E-49 T 25-04-2016 RJP_RS06950 13617ae53e25f5045eb87074601b53a3 126 SMART SM00028 36 69 11.0 T 25-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 RJP_RS06950 13617ae53e25f5045eb87074601b53a3 126 SMART SM00028 70 103 7.6E-9 T 25-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 RJP_RS06950 13617ae53e25f5045eb87074601b53a3 126 PANTHER PTHR23083 11 121 1.4E-23 T 25-04-2016 RJP_RS06950 13617ae53e25f5045eb87074601b53a3 126 SUPERFAMILY SSF48452 10 125 1.1E-29 T 25-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 RJP_RS06950 13617ae53e25f5045eb87074601b53a3 126 Pfam PF13181 Tetratricopeptide repeat 106 125 0.13 T 25-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 RJP_RS06950 13617ae53e25f5045eb87074601b53a3 126 Pfam PF13181 Tetratricopeptide repeat 51 69 0.019 T 25-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 RJP_RS06950 13617ae53e25f5045eb87074601b53a3 126 Pfam PF00515 Tetratricopeptide repeat 71 103 1.8E-11 T 25-04-2016 IPR001440 Tetratricopeptide repeat 1 GO:0005515 RJP_RS06950 13617ae53e25f5045eb87074601b53a3 126 Gene3D G3DSA:1.25.40.10 11 64 6.2E-12 T 25-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 RJP_RS06950 13617ae53e25f5045eb87074601b53a3 126 Gene3D G3DSA:1.25.40.10 65 126 2.2E-23 T 25-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 RJP_RS01275 43dfcd768a918cacc76dc0a2a3a42ae3 373 Pfam PF00684 DnaJ central domain 149 209 9.8E-13 T 25-04-2016 IPR001305 Heat shock protein DnaJ, cysteine-rich domain GO:0031072|GO:0051082 RJP_RS01275 43dfcd768a918cacc76dc0a2a3a42ae3 373 PANTHER PTHR24078 1 363 2.6E-137 T 25-04-2016 RJP_RS01275 43dfcd768a918cacc76dc0a2a3a42ae3 373 PRINTS PR00625 DnaJ domain signature 24 39 5.5E-26 T 25-04-2016 IPR001623 DnaJ domain RJP_RS01275 43dfcd768a918cacc76dc0a2a3a42ae3 373 PRINTS PR00625 DnaJ domain signature 40 60 5.5E-26 T 25-04-2016 IPR001623 DnaJ domain RJP_RS01275 43dfcd768a918cacc76dc0a2a3a42ae3 373 PRINTS PR00625 DnaJ domain signature 6 24 5.5E-26 T 25-04-2016 IPR001623 DnaJ domain RJP_RS01275 43dfcd768a918cacc76dc0a2a3a42ae3 373 PRINTS PR00625 DnaJ domain signature 60 79 5.5E-26 T 25-04-2016 IPR001623 DnaJ domain RJP_RS01275 43dfcd768a918cacc76dc0a2a3a42ae3 373 Gene3D G3DSA:2.10.230.10 146 213 3.7E-21 T 25-04-2016 IPR001305 Heat shock protein DnaJ, cysteine-rich domain GO:0031072|GO:0051082 RJP_RS01275 43dfcd768a918cacc76dc0a2a3a42ae3 373 Gene3D G3DSA:1.10.287.110 2 102 3.3E-33 T 25-04-2016 IPR001623 DnaJ domain RJP_RS01275 43dfcd768a918cacc76dc0a2a3a42ae3 373 Pfam PF01556 DnaJ C terminal domain 123 336 5.3E-39 T 25-04-2016 IPR002939 Chaperone DnaJ, C-terminal RJP_RS01275 43dfcd768a918cacc76dc0a2a3a42ae3 373 SUPERFAMILY SSF49493 120 154 1.96E-19 T 25-04-2016 IPR008971 HSP40/DnaJ peptide-binding GO:0006457|GO:0051082 RJP_RS01275 43dfcd768a918cacc76dc0a2a3a42ae3 373 SUPERFAMILY SSF49493 215 259 1.96E-19 T 25-04-2016 IPR008971 HSP40/DnaJ peptide-binding GO:0006457|GO:0051082 RJP_RS01275 43dfcd768a918cacc76dc0a2a3a42ae3 373 PANTHER PTHR24078:SF231 1 363 2.6E-137 T 25-04-2016 RJP_RS01275 43dfcd768a918cacc76dc0a2a3a42ae3 373 SUPERFAMILY SSF49493 261 347 3.79E-22 T 25-04-2016 IPR008971 HSP40/DnaJ peptide-binding GO:0006457|GO:0051082 RJP_RS01275 43dfcd768a918cacc76dc0a2a3a42ae3 373 Pfam PF00226 DnaJ domain 4 65 5.5E-24 T 25-04-2016 IPR001623 DnaJ domain RJP_RS01275 43dfcd768a918cacc76dc0a2a3a42ae3 373 Gene3D G3DSA:2.60.260.20 258 337 8.9E-21 T 25-04-2016 RJP_RS01275 43dfcd768a918cacc76dc0a2a3a42ae3 373 Gene3D G3DSA:2.60.260.20 215 256 4.6E-20 T 25-04-2016 RJP_RS01275 43dfcd768a918cacc76dc0a2a3a42ae3 373 Gene3D G3DSA:2.60.260.20 116 145 4.6E-20 T 25-04-2016 RJP_RS01275 43dfcd768a918cacc76dc0a2a3a42ae3 373 SMART SM00271 3 60 1.1E-26 T 25-04-2016 IPR001623 DnaJ domain RJP_RS01275 43dfcd768a918cacc76dc0a2a3a42ae3 373 SUPERFAMILY SSF57938 136 213 3.4E-20 T 25-04-2016 IPR001305 Heat shock protein DnaJ, cysteine-rich domain GO:0031072|GO:0051082 RJP_RS01275 43dfcd768a918cacc76dc0a2a3a42ae3 373 SUPERFAMILY SSF46565 3 104 1.31E-31 T 25-04-2016 IPR001623 DnaJ domain RJP_RS01275 43dfcd768a918cacc76dc0a2a3a42ae3 373 TIGRFAM TIGR02349 DnaJ_bact: chaperone protein DnaJ 4 353 1.6E-133 T 25-04-2016 IPR012724 Chaperone DnaJ GO:0005524|GO:0006457|GO:0009408|GO:0051082 RJP_RS01275 43dfcd768a918cacc76dc0a2a3a42ae3 373 ProSitePatterns PS00636 Nt-dnaJ domain signature. 45 64 - T 25-04-2016 IPR018253 DnaJ domain, conserved site RJP_RS01275 43dfcd768a918cacc76dc0a2a3a42ae3 373 Hamap MF_01152 Chaperone protein DnaJ [dnaJ]. 1 371 38.436 T 25-04-2016 IPR012724 Chaperone DnaJ GO:0005524|GO:0006457|GO:0009408|GO:0051082 RJP_RS01845 e312228b75bf5cb44f914a46422425d9 303 ProSitePatterns PS01129 Rlu family of pseudouridine synthase signature. 136 150 - T 25-04-2016 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0009982 RJP_RS01845 e312228b75bf5cb44f914a46422425d9 303 PANTHER PTHR11079 12 302 2.3E-53 T 25-04-2016 RJP_RS01845 e312228b75bf5cb44f914a46422425d9 303 SUPERFAMILY SSF55174 9 109 4.06E-9 T 25-04-2016 RJP_RS01845 e312228b75bf5cb44f914a46422425d9 303 SMART SM00363 11 66 2.0E-10 T 25-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 RJP_RS01845 e312228b75bf5cb44f914a46422425d9 303 PANTHER PTHR11079:SF74 12 302 2.3E-53 T 25-04-2016 RJP_RS01845 e312228b75bf5cb44f914a46422425d9 303 Gene3D G3DSA:3.10.290.10 11 62 7.3E-8 T 25-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 RJP_RS01845 e312228b75bf5cb44f914a46422425d9 303 SUPERFAMILY SSF55120 92 301 2.08E-51 T 25-04-2016 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 RJP_RS01845 e312228b75bf5cb44f914a46422425d9 303 Pfam PF00849 RNA pseudouridylate synthase 97 245 1.7E-30 T 25-04-2016 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 RJP_RS01845 e312228b75bf5cb44f914a46422425d9 303 Pfam PF01479 S4 domain 12 57 2.4E-7 T 25-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 RJP_RS00130 e04d2fe7e36575492c8d448b4af65edf 1975 Gene3D G3DSA:2.40.128.130 1643 1973 3.2E-28 T 25-04-2016 IPR005546 Autotransporter beta-domain RJP_RS00130 e04d2fe7e36575492c8d448b4af65edf 1975 SMART SM00869 1695 1965 3.2E-26 T 25-04-2016 IPR005546 Autotransporter beta-domain RJP_RS00130 e04d2fe7e36575492c8d448b4af65edf 1975 Pfam PF03797 Autotransporter beta-domain 1695 1960 2.0E-42 T 25-04-2016 IPR005546 Autotransporter beta-domain RJP_RS00130 e04d2fe7e36575492c8d448b4af65edf 1975 ProDom PD214418 ANTIGEN SURFACE CELL PRECURSOR SCA1 SIGNAL RP016 1 340 1.0E-148 T 25-04-2016 IPR020179 Antigen surface cell precursor, Sca1 RJP_RS00130 e04d2fe7e36575492c8d448b4af65edf 1975 SUPERFAMILY SSF103515 1663 1973 2.22E-33 T 25-04-2016 IPR005546 Autotransporter beta-domain RJP_RS02440 04bf14d0258383d9830224e3c2de18fb 522 Gene3D G3DSA:3.40.720.10 223 475 1.5E-16 T 25-04-2016 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 RJP_RS02440 04bf14d0258383d9830224e3c2de18fb 522 Pfam PF08019 Domain of unknown function (DUF1705) 61 171 1.6E-12 T 25-04-2016 IPR012549 Domain of unknown function DUF1705 GO:0016021 RJP_RS02440 04bf14d0258383d9830224e3c2de18fb 522 Pfam PF00884 Sulfatase 223 507 2.9E-46 T 25-04-2016 IPR000917 Sulfatase, N-terminal GO:0008152|GO:0008484 RJP_RS02440 04bf14d0258383d9830224e3c2de18fb 522 SUPERFAMILY SSF53649 223 481 4.91E-27 T 25-04-2016 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 RJP_RS02440 04bf14d0258383d9830224e3c2de18fb 522 PANTHER PTHR30443 1 518 7.1E-78 T 25-04-2016 RJP_RS00830 3ab79cffe30daf50e30c05c62b9ddb42 234 Hamap MF_00605 tRNA (guanine-N(1)-)-methyltransferase [trmD]. 1 234 88.561 T 25-04-2016 IPR002649 tRNA (guanine-N1-)-methyltransferase, bacteria GO:0008033|GO:0052906 KEGG: 00340+2.1.1.22|MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 RJP_RS00830 3ab79cffe30daf50e30c05c62b9ddb42 234 PANTHER PTHR32125:SF1 8 234 1.8E-71 T 25-04-2016 RJP_RS00830 3ab79cffe30daf50e30c05c62b9ddb42 234 Gene3D G3DSA:3.40.1280.10 4 162 3.0E-67 T 25-04-2016 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal RJP_RS00830 3ab79cffe30daf50e30c05c62b9ddb42 234 Gene3D G3DSA:1.10.1270.20 170 233 6.3E-23 T 25-04-2016 IPR023148 tRNA (guanine-N1-)-methyltransferase, C-terminal GO:0008033|GO:0052906 KEGG: 00340+2.1.1.22|MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 RJP_RS00830 3ab79cffe30daf50e30c05c62b9ddb42 234 PIRSF PIRSF000386 4 234 7.3E-77 T 25-04-2016 IPR002649 tRNA (guanine-N1-)-methyltransferase, bacteria GO:0008033|GO:0052906 KEGG: 00340+2.1.1.22|MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 RJP_RS00830 3ab79cffe30daf50e30c05c62b9ddb42 234 PANTHER PTHR32125 8 234 1.8E-71 T 25-04-2016 RJP_RS00830 3ab79cffe30daf50e30c05c62b9ddb42 234 Pfam PF01746 tRNA (Guanine-1)-methyltransferase 26 228 8.3E-48 T 25-04-2016 IPR016009 tRNA methyltransferase TRMD/TRM10-type domain KEGG: 00340+2.1.1.22|MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 RJP_RS00830 3ab79cffe30daf50e30c05c62b9ddb42 234 TIGRFAM TIGR00088 trmD: tRNA (guanine(37)-N(1))-methyltransferase 6 233 1.1E-71 T 25-04-2016 IPR002649 tRNA (guanine-N1-)-methyltransferase, bacteria GO:0008033|GO:0052906 KEGG: 00340+2.1.1.22|MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 RJP_RS00830 3ab79cffe30daf50e30c05c62b9ddb42 234 SUPERFAMILY SSF75217 4 233 2.62E-82 T 25-04-2016 IPR029028 Alpha/beta knot methyltransferases RJP_RS01070 cb3bebb4436464a4bebe7b4784729490 242 Gene3D G3DSA:3.40.1160.10 6 241 1.9E-80 T 25-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 RJP_RS01070 cb3bebb4436464a4bebe7b4784729490 242 PIRSF PIRSF005650 5 242 2.5E-95 T 25-04-2016 IPR011817 Uridylate kinase GO:0006221|GO:0009041 KEGG: 00240+2.7.4.22|UniPathway: UPA00159 RJP_RS01070 cb3bebb4436464a4bebe7b4784729490 242 SUPERFAMILY SSF53633 8 240 5.24E-68 T 25-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 RJP_RS01070 cb3bebb4436464a4bebe7b4784729490 242 TIGRFAM TIGR02075 pyrH_bact: UMP kinase 10 240 1.5E-100 T 25-04-2016 IPR015963 Uridylate kinase, bacteria GO:0005737|GO:0006221|GO:0033862 KEGG: 00240+2.7.4.22|UniPathway: UPA00159 RJP_RS01070 cb3bebb4436464a4bebe7b4784729490 242 Hamap MF_01220_B Uridylate kinase [pyrH]. 8 241 42.645 T 25-04-2016 IPR015963 Uridylate kinase, bacteria GO:0005737|GO:0006221|GO:0033862 KEGG: 00240+2.7.4.22|UniPathway: UPA00159 RJP_RS01070 cb3bebb4436464a4bebe7b4784729490 242 Pfam PF00696 Amino acid kinase family 11 220 1.6E-27 T 25-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 RJP_RS01070 cb3bebb4436464a4bebe7b4784729490 242 PANTHER PTHR21499:SF23 6 241 3.2E-104 T 25-04-2016 IPR011817 Uridylate kinase GO:0006221|GO:0009041 KEGG: 00240+2.7.4.22|UniPathway: UPA00159 RJP_RS01070 cb3bebb4436464a4bebe7b4784729490 242 PANTHER PTHR21499 6 241 3.2E-104 T 25-04-2016 RJP_RS04775 cdd288684d7ecc374d6310eb9e7e3198 1092 SUPERFAMILY SSF47323 840 948 3.76E-42 T 25-04-2016 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 RJP_RS04775 cdd288684d7ecc374d6310eb9e7e3198 1092 SUPERFAMILY SSF47323 669 797 3.76E-42 T 25-04-2016 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 RJP_RS04775 cdd288684d7ecc374d6310eb9e7e3198 1092 PANTHER PTHR11946 1 257 0.0 T 25-04-2016 RJP_RS04775 cdd288684d7ecc374d6310eb9e7e3198 1092 PANTHER PTHR11946 283 797 0.0 T 25-04-2016 RJP_RS04775 cdd288684d7ecc374d6310eb9e7e3198 1092 PANTHER PTHR11946 990 1018 0.0 T 25-04-2016 RJP_RS04775 cdd288684d7ecc374d6310eb9e7e3198 1092 PANTHER PTHR11946 839 960 0.0 T 25-04-2016 RJP_RS04775 cdd288684d7ecc374d6310eb9e7e3198 1092 Gene3D G3DSA:3.90.740.10 237 408 5.4E-55 T 25-04-2016 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 Reactome: REACT_71 RJP_RS04775 cdd288684d7ecc374d6310eb9e7e3198 1092 Pfam PF08264 Anticodon-binding domain of tRNA 700 886 2.3E-17 T 25-04-2016 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding GO:0000166|GO:0006418 Reactome: REACT_71 RJP_RS04775 cdd288684d7ecc374d6310eb9e7e3198 1092 Hamap MF_02003 Isoleucine--tRNA ligase [ileS]. 8 1086 13.836 T 25-04-2016 IPR023586 Isoleucine-tRNA ligase, type 2 GO:0004822 KEGG: 00970+6.1.1.5 RJP_RS04775 cdd288684d7ecc374d6310eb9e7e3198 1092 SUPERFAMILY SSF50677 210 405 7.74E-46 T 25-04-2016 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 Reactome: REACT_71 RJP_RS04775 cdd288684d7ecc374d6310eb9e7e3198 1092 PANTHER PTHR11946:SF73 1 257 0.0 T 25-04-2016 RJP_RS04775 cdd288684d7ecc374d6310eb9e7e3198 1092 PANTHER PTHR11946:SF73 283 797 0.0 T 25-04-2016 RJP_RS04775 cdd288684d7ecc374d6310eb9e7e3198 1092 PANTHER PTHR11946:SF73 990 1018 0.0 T 25-04-2016 RJP_RS04775 cdd288684d7ecc374d6310eb9e7e3198 1092 PANTHER PTHR11946:SF73 839 960 0.0 T 25-04-2016 RJP_RS04775 cdd288684d7ecc374d6310eb9e7e3198 1092 Gene3D G3DSA:3.40.50.620 409 646 6.1E-146 T 25-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold RJP_RS04775 cdd288684d7ecc374d6310eb9e7e3198 1092 Gene3D G3DSA:3.40.50.620 10 199 6.1E-146 T 25-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold RJP_RS04775 cdd288684d7ecc374d6310eb9e7e3198 1092 SUPERFAMILY SSF52374 12 203 1.08E-128 T 25-04-2016 RJP_RS04775 cdd288684d7ecc374d6310eb9e7e3198 1092 SUPERFAMILY SSF52374 405 644 1.08E-128 T 25-04-2016 RJP_RS04775 cdd288684d7ecc374d6310eb9e7e3198 1092 TIGRFAM TIGR00392 ileS: isoleucine--tRNA ligase 11 902 7.7E-258 T 25-04-2016 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5|Reactome: REACT_71 RJP_RS04775 cdd288684d7ecc374d6310eb9e7e3198 1092 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 46 57 4.7E-30 T 25-04-2016 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5|Reactome: REACT_71 RJP_RS04775 cdd288684d7ecc374d6310eb9e7e3198 1092 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 403 418 4.7E-30 T 25-04-2016 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5|Reactome: REACT_71 RJP_RS04775 cdd288684d7ecc374d6310eb9e7e3198 1092 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 572 581 4.7E-30 T 25-04-2016 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5|Reactome: REACT_71 RJP_RS04775 cdd288684d7ecc374d6310eb9e7e3198 1092 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 236 259 4.7E-30 T 25-04-2016 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5|Reactome: REACT_71 RJP_RS04775 cdd288684d7ecc374d6310eb9e7e3198 1092 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 532 545 4.7E-30 T 25-04-2016 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5|Reactome: REACT_71 RJP_RS04775 cdd288684d7ecc374d6310eb9e7e3198 1092 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 23 647 5.0E-188 T 25-04-2016 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 RJP_RS04775 cdd288684d7ecc374d6310eb9e7e3198 1092 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 53 64 - T 25-04-2016 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 RJP_RS04775 cdd288684d7ecc374d6310eb9e7e3198 1092 Gene3D G3DSA:1.10.730.10 836 881 1.6E-48 T 25-04-2016 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 RJP_RS04775 cdd288684d7ecc374d6310eb9e7e3198 1092 Gene3D G3DSA:1.10.730.10 661 797 1.6E-48 T 25-04-2016 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 RJP_RS06905 dd54c1fddb7a7ed930657c5e79aed91f 209 Gene3D G3DSA:3.90.1550.10 5 208 6.0E-65 T 25-04-2016 RJP_RS06905 dd54c1fddb7a7ed930657c5e79aed91f 209 TIGRFAM TIGR00214 lipB: lipoyl(octanoyl) transferase 35 190 1.1E-45 T 25-04-2016 IPR000544 Octanoyltransferase GO:0005737|GO:0009107|GO:0016415 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382|UniPathway: UPA00538 RJP_RS06905 dd54c1fddb7a7ed930657c5e79aed91f 209 ProSitePatterns PS01313 Lipoate-protein ligase B signature. 69 84 - T 25-04-2016 IPR020605 Octanoyltransferase, conserved site GO:0005737|GO:0009107|GO:0016415 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382|UniPathway: UPA00538 RJP_RS06905 dd54c1fddb7a7ed930657c5e79aed91f 209 PIRSF PIRSF016262 1 209 4.6E-60 T 25-04-2016 IPR000544 Octanoyltransferase GO:0005737|GO:0009107|GO:0016415 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382|UniPathway: UPA00538 RJP_RS06905 dd54c1fddb7a7ed930657c5e79aed91f 209 Hamap MF_00013 Octanoyltransferase [lipB]. 2 209 33.734 T 25-04-2016 IPR000544 Octanoyltransferase GO:0005737|GO:0009107|GO:0016415 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382|UniPathway: UPA00538 RJP_RS06905 dd54c1fddb7a7ed930657c5e79aed91f 209 SUPERFAMILY SSF55681 5 208 3.98E-60 T 25-04-2016 RJP_RS06905 dd54c1fddb7a7ed930657c5e79aed91f 209 PANTHER PTHR10993 20 208 1.4E-66 T 25-04-2016 RJP_RS06905 dd54c1fddb7a7ed930657c5e79aed91f 209 ProDom PD006086 LIGASE LIPOATE-PROTEIN B TRANSFERASE ACYLTRANSFERASE LIPOYLTRANSFERASE LIPOYL-ACYL-CARRIER 2.3.1.- PROTEIN-PROTEIN- N-LIPOYLTRANSFERASE 74 128 1.0E-25 T 25-04-2016 RJP_RS06905 dd54c1fddb7a7ed930657c5e79aed91f 209 Pfam PF03099 Biotin/lipoate A/B protein ligase family 56 164 2.3E-8 T 25-04-2016 IPR004143 Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL), catalytic domain GO:0006464 RJP_RS03635 fb8ac8962ddf4bc8dfb9a53382007c9b 355 SUPERFAMILY SSF75620 28 352 6.28E-123 T 25-04-2016 RJP_RS03635 fb8ac8962ddf4bc8dfb9a53382007c9b 355 Gene3D G3DSA:3.30.160.20 209 287 5.2E-36 T 25-04-2016 IPR014720 Double-stranded RNA-binding domain RJP_RS03635 fb8ac8962ddf4bc8dfb9a53382007c9b 355 SMART SM00937 62 177 8.7E-48 T 25-04-2016 IPR005139 Peptide chain release factor GO:0005737|GO:0006415|GO:0016149 RJP_RS03635 fb8ac8962ddf4bc8dfb9a53382007c9b 355 PANTHER PTHR11075:SF9 5 355 4.3E-168 T 25-04-2016 RJP_RS03635 fb8ac8962ddf4bc8dfb9a53382007c9b 355 Pfam PF03462 PCRF domain 12 202 1.0E-62 T 25-04-2016 IPR005139 Peptide chain release factor GO:0005737|GO:0006415|GO:0016149 RJP_RS03635 fb8ac8962ddf4bc8dfb9a53382007c9b 355 Gene3D G3DSA:1.20.58.410 7 92 5.0E-6 T 25-04-2016 RJP_RS03635 fb8ac8962ddf4bc8dfb9a53382007c9b 355 Hamap MF_00093 Peptide chain release factor 1 [prfA]. 3 355 37.793 T 25-04-2016 IPR004373 Peptide chain release factor 1 GO:0005737|GO:0006415|GO:0016149 RJP_RS03635 fb8ac8962ddf4bc8dfb9a53382007c9b 355 ProSitePatterns PS00745 Prokaryotic-type class I peptide chain release factors signature. 226 242 - T 25-04-2016 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 RJP_RS03635 fb8ac8962ddf4bc8dfb9a53382007c9b 355 TIGRFAM TIGR00019 prfA: peptide chain release factor 1 4 353 2.0E-148 T 25-04-2016 IPR004373 Peptide chain release factor 1 GO:0005737|GO:0006415|GO:0016149 RJP_RS03635 fb8ac8962ddf4bc8dfb9a53382007c9b 355 Pfam PF00472 RF-1 domain 210 319 5.7E-42 T 25-04-2016 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 RJP_RS03635 fb8ac8962ddf4bc8dfb9a53382007c9b 355 PANTHER PTHR11075 5 355 4.3E-168 T 25-04-2016 RJP_RS00410 abac5c72d3d2766862d60d85142ead7a 261 Gene3D G3DSA:1.10.1060.10 129 258 2.9E-50 T 25-04-2016 RJP_RS00410 abac5c72d3d2766862d60d85142ead7a 261 SUPERFAMILY SSF54292 27 128 6.03E-32 T 25-04-2016 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 RJP_RS00410 abac5c72d3d2766862d60d85142ead7a 261 PANTHER PTHR11921:SF27 28 258 1.7E-160 T 25-04-2016 RJP_RS00410 abac5c72d3d2766862d60d85142ead7a 261 SUPERFAMILY SSF46548 129 258 4.01E-39 T 25-04-2016 IPR009051 Alpha-helical ferredoxin GO:0051536 RJP_RS00410 abac5c72d3d2766862d60d85142ead7a 261 PANTHER PTHR11921 28 258 1.7E-160 T 25-04-2016 RJP_RS00410 abac5c72d3d2766862d60d85142ead7a 261 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 171 182 - T 25-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site RJP_RS00410 abac5c72d3d2766862d60d85142ead7a 261 TIGRFAM TIGR00384 dhsB: succinate dehydrogenase and fumarate reductase iron-sulfur protein 32 252 4.4E-85 T 25-04-2016 IPR004489 Succinate dehydrogenase/fumarate reductase iron-sulphur protein GO:0006099|GO:0016491|GO:0055114 KEGG: 00020+1.3.5.1|KEGG: 00190+1.3.5.1|KEGG: 00650+1.3.5.1|KEGG: 00720+1.3.5.1|MetaCyc: PWY-3781|MetaCyc: PWY-4302|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7279 RJP_RS00410 abac5c72d3d2766862d60d85142ead7a 261 Gene3D G3DSA:3.10.20.30 22 128 6.3E-42 T 25-04-2016 IPR012675 Beta-grasp domain RJP_RS00410 abac5c72d3d2766862d60d85142ead7a 261 Pfam PF13085 2Fe-2S iron-sulfur cluster binding domain 29 133 2.2E-33 T 25-04-2016 IPR025192 Succinate dehydogenase/fumarate reductase N-terminal GO:0009055|GO:0051536 KEGG: 00020+1.3.5.1|KEGG: 00190+1.3.5.1|KEGG: 00650+1.3.5.1|KEGG: 00720+1.3.5.1|MetaCyc: PWY-3781|MetaCyc: PWY-4302|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7279 RJP_RS00410 abac5c72d3d2766862d60d85142ead7a 261 Pfam PF13534 4Fe-4S dicluster domain 170 243 3.9E-9 T 25-04-2016 RJP_RS00410 abac5c72d3d2766862d60d85142ead7a 261 ProSitePatterns PS00197 2Fe-2S ferredoxin-type iron-sulfur binding region signature. 80 88 - T 25-04-2016 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site GO:0051537 RJP_RS01550 b4dcd655e57a91511e31dac56ec52d76 456 Pfam PF01654 Cytochrome bd terminal oxidase subunit I 8 434 3.1E-160 T 25-04-2016 IPR002585 Cytochrome ubiquinol oxidase subunit 1 GO:0016020 RJP_RS01550 b4dcd655e57a91511e31dac56ec52d76 456 PANTHER PTHR30365 1 455 3.3E-234 T 25-04-2016 RJP_RS01550 b4dcd655e57a91511e31dac56ec52d76 456 PANTHER PTHR30365:SF8 1 455 3.3E-234 T 25-04-2016 RJP_RS01550 b4dcd655e57a91511e31dac56ec52d76 456 PIRSF PIRSF006446 1 452 1.8E-191 T 25-04-2016 IPR002585 Cytochrome ubiquinol oxidase subunit 1 GO:0016020 RJP_RS05770 e191b763c4aa92e5cb2617acfa3f2574 314 SMART SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. 6 302 1.2E-15 T 25-04-2016 IPR020801 Polyketide synthase, acyl transferase domain RJP_RS05770 e191b763c4aa92e5cb2617acfa3f2574 314 Gene3D G3DSA:3.30.70.250 128 198 1.0E-20 T 25-04-2016 RJP_RS05770 e191b763c4aa92e5cb2617acfa3f2574 314 SUPERFAMILY SSF55048 131 199 1.44E-13 T 25-04-2016 IPR016036 Malonyl-CoA ACP transacylase, ACP-binding GO:0003824|GO:0008152 RJP_RS05770 e191b763c4aa92e5cb2617acfa3f2574 314 TIGRFAM TIGR00128 fabD: malonyl CoA-acyl carrier protein transacylase 1 291 2.2E-82 T 25-04-2016 IPR004410 Malonyl CoA-acyl carrier protein transacylase, FabD-type GO:0004314 KEGG: 00061+2.3.1.39|MetaCyc: PWY-4381|MetaCyc: PWY-6799|MetaCyc: PWY-7388 RJP_RS05770 e191b763c4aa92e5cb2617acfa3f2574 314 Pfam PF00698 Acyl transferase domain 5 288 8.4E-30 T 25-04-2016 IPR014043 Acyl transferase RJP_RS05770 e191b763c4aa92e5cb2617acfa3f2574 314 PANTHER PTHR10982 1 312 9.2E-109 T 25-04-2016 RJP_RS05770 e191b763c4aa92e5cb2617acfa3f2574 314 PIRSF PIRSF000446 1 313 1.9E-85 T 25-04-2016 IPR024925 Malonyl CoA-acyl carrier protein transacylase KEGG: 00061+2.3.1.39|MetaCyc: PWY-4381|MetaCyc: PWY-6799|MetaCyc: PWY-7388|UniPathway: UPA00094 RJP_RS05770 e191b763c4aa92e5cb2617acfa3f2574 314 SUPERFAMILY SSF52151 3 125 9.42E-65 T 25-04-2016 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase GO:0008152 RJP_RS05770 e191b763c4aa92e5cb2617acfa3f2574 314 SUPERFAMILY SSF52151 192 310 9.42E-65 T 25-04-2016 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase GO:0008152 RJP_RS05770 e191b763c4aa92e5cb2617acfa3f2574 314 Gene3D G3DSA:3.40.366.10 199 307 7.4E-58 T 25-04-2016 IPR001227 Acyl transferase domain GO:0008152|GO:0016740 RJP_RS05770 e191b763c4aa92e5cb2617acfa3f2574 314 Gene3D G3DSA:3.40.366.10 2 125 7.4E-58 T 25-04-2016 IPR001227 Acyl transferase domain GO:0008152|GO:0016740 RJP_RS03530 eea8ffb9b663d90dfa1daa42f37bc32b 277 PANTHER PTHR20852 25 263 1.6E-17 T 25-04-2016 RJP_RS03530 eea8ffb9b663d90dfa1daa42f37bc32b 277 Gene3D G3DSA:3.30.590.10 64 272 6.8E-35 T 25-04-2016 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain GO:0003824 Reactome: REACT_13 RJP_RS03530 eea8ffb9b663d90dfa1daa42f37bc32b 277 Pfam PF00120 Glutamine synthetase, catalytic domain 67 272 1.3E-26 T 25-04-2016 IPR008146 Glutamine synthetase, catalytic domain GO:0004356|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 RJP_RS03530 eea8ffb9b663d90dfa1daa42f37bc32b 277 SUPERFAMILY SSF55931 25 276 1.72E-44 T 25-04-2016 RJP_RS03530 eea8ffb9b663d90dfa1daa42f37bc32b 277 SMART SM01230 18 230 1.7E-12 T 25-04-2016 IPR008146 Glutamine synthetase, catalytic domain GO:0004356|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 RJP_RS03170 c572c51c635c024efb19e448795e757b 84 Pfam PF04014 Antidote-toxin recognition MazE, bacterial antitoxin 9 45 5.8E-6 T 25-04-2016 IPR007159 SpoVT-AbrB domain GO:0003677 RJP_RS03170 c572c51c635c024efb19e448795e757b 84 TIGRFAM TIGR01439 lp_hng_hel_AbrB: transcriptional regulator, AbrB family 6 48 7.4E-17 T 25-04-2016 IPR007159 SpoVT-AbrB domain GO:0003677 RJP_RS03170 c572c51c635c024efb19e448795e757b 84 Gene3D G3DSA:2.10.260.10 7 41 4.5E-9 T 25-04-2016 RJP_RS03170 c572c51c635c024efb19e448795e757b 84 SMART SM00966 7 53 4.6E-11 T 25-04-2016 IPR007159 SpoVT-AbrB domain GO:0003677 RJP_RS03170 c572c51c635c024efb19e448795e757b 84 SUPERFAMILY SSF89447 4 41 5.76E-10 T 25-04-2016 RJP_RS03070 cef39d05a2148a6ee7eea8b41f124855 416 PANTHER PTHR11918:SF45 9 412 9.4E-121 T 25-04-2016 RJP_RS03070 cef39d05a2148a6ee7eea8b41f124855 416 TIGRFAM TIGR01579 MiaB-like-C: MiaB-like tRNA modifying enzyme 10 391 6.7E-134 T 25-04-2016 IPR006467 MiaB-like tRNA modifying enzyme GO:0016740 RJP_RS03070 cef39d05a2148a6ee7eea8b41f124855 416 TIGRFAM TIGR00089 TIGR00089: radical SAM methylthiotransferase, MiaB/RimO family 9 411 2.5E-109 T 25-04-2016 IPR005839 Methylthiotransferase GO:0016740|GO:0043412|GO:0051539 RJP_RS03070 cef39d05a2148a6ee7eea8b41f124855 416 SMART SM00729 133 351 9.0E-57 T 25-04-2016 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 RJP_RS03070 cef39d05a2148a6ee7eea8b41f124855 416 SUPERFAMILY SSF102114 102 352 9.55E-56 T 25-04-2016 RJP_RS03070 cef39d05a2148a6ee7eea8b41f124855 416 Gene3D G3DSA:3.80.30.20 133 361 8.9E-67 T 25-04-2016 IPR023404 Radical SAM, alpha/beta horseshoe RJP_RS03070 cef39d05a2148a6ee7eea8b41f124855 416 ProSitePatterns PS01278 Methylthiotransferase radical SAM domain signature. 137 157 - T 25-04-2016 IPR020612 Methylthiotransferase, conserved site GO:0051539 RJP_RS03070 cef39d05a2148a6ee7eea8b41f124855 416 PANTHER PTHR11918 9 412 9.4E-121 T 25-04-2016 IPR023970 Methylthiotransferase/radical SAM-type protein RJP_RS03070 cef39d05a2148a6ee7eea8b41f124855 416 Pfam PF04055 Radical SAM superfamily 138 310 1.2E-23 T 25-04-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 RJP_RS03070 cef39d05a2148a6ee7eea8b41f124855 416 Pfam PF00919 Uncharacterized protein family UPF0004 8 93 1.5E-16 T 25-04-2016 IPR013848 Methylthiotransferase, N-terminal GO:0003824|GO:0009451|GO:0051539 RJP_RS01660 5eaca04a067f71490fecb05bd7fbd060 662 Pfam PF00986 DNA gyrase B subunit, carboxyl terminus 585 645 6.4E-26 T 25-04-2016 IPR002288 DNA gyrase B subunit, C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 RJP_RS01660 5eaca04a067f71490fecb05bd7fbd060 662 SUPERFAMILY SSF54211 242 412 6.45E-38 T 25-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold RJP_RS01660 5eaca04a067f71490fecb05bd7fbd060 662 PRINTS PR00418 DNA topoisomerase II family signature 49 64 8.8E-63 T 25-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 RJP_RS01660 5eaca04a067f71490fecb05bd7fbd060 662 PRINTS PR00418 DNA topoisomerase II family signature 525 542 8.8E-63 T 25-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 RJP_RS01660 5eaca04a067f71490fecb05bd7fbd060 662 PRINTS PR00418 DNA topoisomerase II family signature 441 455 8.8E-63 T 25-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 RJP_RS01660 5eaca04a067f71490fecb05bd7fbd060 662 PRINTS PR00418 DNA topoisomerase II family signature 589 605 8.8E-63 T 25-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 RJP_RS01660 5eaca04a067f71490fecb05bd7fbd060 662 PRINTS PR00418 DNA topoisomerase II family signature 84 97 8.8E-63 T 25-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 RJP_RS01660 5eaca04a067f71490fecb05bd7fbd060 662 PRINTS PR00418 DNA topoisomerase II family signature 507 523 8.8E-63 T 25-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 RJP_RS01660 5eaca04a067f71490fecb05bd7fbd060 662 PRINTS PR00418 DNA topoisomerase II family signature 292 305 8.8E-63 T 25-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 RJP_RS01660 5eaca04a067f71490fecb05bd7fbd060 662 PRINTS PR00418 DNA topoisomerase II family signature 128 142 8.8E-63 T 25-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 RJP_RS01660 5eaca04a067f71490fecb05bd7fbd060 662 PRINTS PR00418 DNA topoisomerase II family signature 545 557 8.8E-63 T 25-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 RJP_RS01660 5eaca04a067f71490fecb05bd7fbd060 662 Pfam PF00204 DNA gyrase B 242 411 7.4E-40 T 25-04-2016 IPR013506 DNA topoisomerase, type IIA, subunit B, domain 2 GO:0003677|GO:0003918|GO:0005524|GO:0006265 RJP_RS01660 5eaca04a067f71490fecb05bd7fbd060 662 SUPERFAMILY SSF55874 20 223 3.54E-54 T 25-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RJP_RS01660 5eaca04a067f71490fecb05bd7fbd060 662 Hamap MF_00938 DNA topoisomerase 4 subunit B [parE]. 17 654 41.48 T 25-04-2016 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 RJP_RS01660 5eaca04a067f71490fecb05bd7fbd060 662 PANTHER PTHR10169 1 637 1.8E-195 T 25-04-2016 RJP_RS01660 5eaca04a067f71490fecb05bd7fbd060 662 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 46 190 2.1E-19 T 25-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RJP_RS01660 5eaca04a067f71490fecb05bd7fbd060 662 PANTHER PTHR10169:SF45 1 637 1.8E-195 T 25-04-2016 RJP_RS01660 5eaca04a067f71490fecb05bd7fbd060 662 SMART SM00387 45 191 7.1E-22 T 25-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RJP_RS01660 5eaca04a067f71490fecb05bd7fbd060 662 Pfam PF01751 Toprim domain 440 547 7.4E-18 T 25-04-2016 IPR006171 Toprim domain RJP_RS01660 5eaca04a067f71490fecb05bd7fbd060 662 TIGRFAM TIGR01055 parE_Gneg: DNA topoisomerase IV, B subunit 18 656 0.0 T 25-04-2016 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 RJP_RS01660 5eaca04a067f71490fecb05bd7fbd060 662 Gene3D G3DSA:3.40.50.670 425 637 2.8E-79 T 25-04-2016 IPR013759 DNA topoisomerase, type IIA, central domain GO:0003677|GO:0003918|GO:0005524|GO:0006265 RJP_RS01660 5eaca04a067f71490fecb05bd7fbd060 662 PRINTS PR01159 DNA gyrase subunit B signature 334 350 3.9E-13 T 25-04-2016 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 RJP_RS01660 5eaca04a067f71490fecb05bd7fbd060 662 PRINTS PR01159 DNA gyrase subunit B signature 20 30 3.9E-13 T 25-04-2016 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 RJP_RS01660 5eaca04a067f71490fecb05bd7fbd060 662 PRINTS PR01159 DNA gyrase subunit B signature 610 622 3.9E-13 T 25-04-2016 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 RJP_RS01660 5eaca04a067f71490fecb05bd7fbd060 662 PRINTS PR01159 DNA gyrase subunit B signature 626 642 3.9E-13 T 25-04-2016 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 RJP_RS01660 5eaca04a067f71490fecb05bd7fbd060 662 PRINTS PR01159 DNA gyrase subunit B signature 265 283 3.9E-13 T 25-04-2016 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 RJP_RS01660 5eaca04a067f71490fecb05bd7fbd060 662 PRINTS PR01159 DNA gyrase subunit B signature 396 416 3.9E-13 T 25-04-2016 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 RJP_RS01660 5eaca04a067f71490fecb05bd7fbd060 662 SUPERFAMILY SSF56719 415 647 7.32E-74 T 25-04-2016 IPR013760 DNA topoisomerase, type IIA-like domain GO:0003918|GO:0005524 RJP_RS01660 5eaca04a067f71490fecb05bd7fbd060 662 SMART SM00433 49 650 1.7E-298 T 25-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 RJP_RS01660 5eaca04a067f71490fecb05bd7fbd060 662 Gene3D G3DSA:3.30.565.10 20 223 1.1E-74 T 25-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RJP_RS01660 5eaca04a067f71490fecb05bd7fbd060 662 Gene3D G3DSA:3.30.230.10 241 412 1.0E-39 T 25-04-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup RJP_RS01660 5eaca04a067f71490fecb05bd7fbd060 662 ProSitePatterns PS00177 DNA topoisomerase II signature. 443 451 - T 25-04-2016 IPR018522 DNA topoisomerase, type IIA, conserved site GO:0003677|GO:0003918|GO:0005524|GO:0006265 RJP_RS01035 fc15c046fd29872348ac6b1332822b7d 239 SUPERFAMILY SSF51735 1 106 2.32E-35 T 25-04-2016 IPR016040 NAD(P)-binding domain RJP_RS01035 fc15c046fd29872348ac6b1332822b7d 239 SUPERFAMILY SSF51735 209 238 2.32E-35 T 25-04-2016 IPR016040 NAD(P)-binding domain RJP_RS01035 fc15c046fd29872348ac6b1332822b7d 239 SUPERFAMILY SSF55347 107 209 5.89E-29 T 25-04-2016 RJP_RS01035 fc15c046fd29872348ac6b1332822b7d 239 Pfam PF01113 Dihydrodipicolinate reductase, N-terminus 3 105 8.3E-25 T 25-04-2016 IPR000846 Dihydrodipicolinate reductase, N-terminal GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 RJP_RS01035 fc15c046fd29872348ac6b1332822b7d 239 ProSitePatterns PS01298 Dihydrodipicolinate reductase signature. 129 146 - T 25-04-2016 IPR022664 Dihydrodipicolinate reductase, conserved site GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 RJP_RS01035 fc15c046fd29872348ac6b1332822b7d 239 Gene3D G3DSA:3.40.50.720 1 139 2.6E-44 T 25-04-2016 IPR016040 NAD(P)-binding domain RJP_RS01035 fc15c046fd29872348ac6b1332822b7d 239 TIGRFAM TIGR00036 dapB: 4-hydroxy-tetrahydrodipicolinate reductase 47 236 9.1E-57 T 25-04-2016 IPR023940 Dihydrodipicolinate reductase GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 RJP_RS01035 fc15c046fd29872348ac6b1332822b7d 239 Hamap MF_00102 4-hydroxy-tetrahydrodipicolinate reductase [dapB]. 2 238 30.288 T 25-04-2016 IPR023940 Dihydrodipicolinate reductase GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 RJP_RS01035 fc15c046fd29872348ac6b1332822b7d 239 Pfam PF05173 Dihydrodipicolinate reductase, C-terminus 108 236 5.2E-39 T 25-04-2016 IPR022663 Dihydrodipicolinate reductase, C-terminal GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 RJP_RS01035 fc15c046fd29872348ac6b1332822b7d 239 PANTHER PTHR20836 1 236 4.8E-58 T 25-04-2016 IPR023940 Dihydrodipicolinate reductase GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 RJP_RS01035 fc15c046fd29872348ac6b1332822b7d 239 PIRSF PIRSF000161 1 239 1.8E-81 T 25-04-2016 IPR023940 Dihydrodipicolinate reductase GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 RJP_RS06480 b9addfb4b82c3ec15c9817f62270c63f 492 Gene3D G3DSA:3.40.1670.10 342 458 4.7E-51 T 25-04-2016 RJP_RS06480 b9addfb4b82c3ec15c9817f62270c63f 492 Gene3D G3DSA:1.20.5.570 460 492 3.0E-11 T 25-04-2016 RJP_RS06480 b9addfb4b82c3ec15c9817f62270c63f 492 SUPERFAMILY SSF143968 328 490 5.36E-64 T 25-04-2016 RJP_RS06480 b9addfb4b82c3ec15c9817f62270c63f 492 PANTHER PTHR30108:SF1 1 490 2.0E-220 T 25-04-2016 RJP_RS06480 b9addfb4b82c3ec15c9817f62270c63f 492 SUPERFAMILY SSF50475 3 327 5.1E-109 T 25-04-2016 IPR012349 FMN-binding split barrel GO:0010181|GO:0016491|GO:0055114 UniPathway: UPA00647 RJP_RS06480 b9addfb4b82c3ec15c9817f62270c63f 492 TIGRFAM TIGR00148 TIGR00148: decarboxylase, UbiD family 8 460 9.5E-155 T 25-04-2016 IPR002830 UbiD decarboxylyase family GO:0016831 KEGG: 00130+4.1.1.98|MetaCyc: PWY-5855|MetaCyc: PWY-5856|MetaCyc: PWY-5857|MetaCyc: PWY-6708|MetaCyc: PWY-6978|UniPathway: UPA00232 RJP_RS06480 b9addfb4b82c3ec15c9817f62270c63f 492 Pfam PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase 10 435 9.9E-158 T 25-04-2016 IPR002830 UbiD decarboxylyase family GO:0016831 KEGG: 00130+4.1.1.98|MetaCyc: PWY-5855|MetaCyc: PWY-5856|MetaCyc: PWY-5857|MetaCyc: PWY-6708|MetaCyc: PWY-6978|UniPathway: UPA00232 RJP_RS06480 b9addfb4b82c3ec15c9817f62270c63f 492 PANTHER PTHR30108 1 490 2.0E-220 T 25-04-2016 RJP_RS03465 b7fa0a7790f14dd102de43f01b550e42 363 SUPERFAMILY SSF52540 223 282 7.42E-9 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RJP_RS03465 b7fa0a7790f14dd102de43f01b550e42 363 SUPERFAMILY SSF52540 56 123 7.42E-9 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RJP_RS03465 b7fa0a7790f14dd102de43f01b550e42 363 Hamap MF_00185 tRNA dimethylallyltransferase [miaA]. 60 357 25.885 T 25-04-2016 IPR018022 tRNA dimethylallyltransferase GO:0008033 KEGG: 00908+2.5.1.75|MetaCyc: PWY-2781 RJP_RS03465 b7fa0a7790f14dd102de43f01b550e42 363 SUPERFAMILY SSF52540 60 210 1.07E-21 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RJP_RS03465 b7fa0a7790f14dd102de43f01b550e42 363 Gene3D G3DSA:3.40.50.300 56 227 2.9E-48 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RJP_RS03465 b7fa0a7790f14dd102de43f01b550e42 363 TIGRFAM TIGR00174 miaA: tRNA dimethylallyltransferase 60 339 3.3E-77 T 25-04-2016 IPR018022 tRNA dimethylallyltransferase GO:0008033 KEGG: 00908+2.5.1.75|MetaCyc: PWY-2781 RJP_RS03465 b7fa0a7790f14dd102de43f01b550e42 363 PANTHER PTHR11088 49 338 6.3E-86 T 25-04-2016 RJP_RS03465 b7fa0a7790f14dd102de43f01b550e42 363 Gene3D G3DSA:1.10.287.890 256 337 1.6E-23 T 25-04-2016 RJP_RS03465 b7fa0a7790f14dd102de43f01b550e42 363 Pfam PF01715 IPP transferase 93 337 3.1E-65 T 25-04-2016 IPR018022 tRNA dimethylallyltransferase GO:0008033 KEGG: 00908+2.5.1.75|MetaCyc: PWY-2781 RJP_RS06155 02a1accc649694ec63c974254d8a1a7c 280 SUPERFAMILY SSF55973 171 279 5.49E-46 T 25-04-2016 IPR022636 S-adenosylmethionine synthetase superfamily GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: REACT_13433|UniPathway: UPA00315 RJP_RS06155 02a1accc649694ec63c974254d8a1a7c 280 SUPERFAMILY SSF55973 48 170 2.35E-49 T 25-04-2016 IPR022636 S-adenosylmethionine synthetase superfamily GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: REACT_13433|UniPathway: UPA00315 RJP_RS06155 02a1accc649694ec63c974254d8a1a7c 280 TIGRFAM TIGR01034 metK: methionine adenosyltransferase 1 279 2.6E-124 T 25-04-2016 IPR002133 S-adenosylmethionine synthetase GO:0004478|GO:0005524|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: REACT_13433|UniPathway: UPA00315 RJP_RS06155 02a1accc649694ec63c974254d8a1a7c 280 Pfam PF02773 S-adenosylmethionine synthetase, C-terminal domain 171 279 2.9E-48 T 25-04-2016 IPR022630 S-adenosylmethionine synthetase, C-terminal GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: REACT_13433|UniPathway: UPA00315 RJP_RS06155 02a1accc649694ec63c974254d8a1a7c 280 PANTHER PTHR11964 1 279 8.5E-152 T 25-04-2016 IPR002133 S-adenosylmethionine synthetase GO:0004478|GO:0005524|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: REACT_13433|UniPathway: UPA00315 RJP_RS06155 02a1accc649694ec63c974254d8a1a7c 280 PANTHER PTHR11964:SF1 1 279 8.5E-152 T 25-04-2016 RJP_RS06155 02a1accc649694ec63c974254d8a1a7c 280 Gene3D G3DSA:3.30.300.10 183 279 3.5E-43 T 25-04-2016 RJP_RS06155 02a1accc649694ec63c974254d8a1a7c 280 ProSitePatterns PS00377 S-adenosylmethionine synthase signature 2. 197 205 - T 25-04-2016 IPR022631 S-adenosylmethionine synthetase, conserved site GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: REACT_13433|UniPathway: UPA00315 RJP_RS06155 02a1accc649694ec63c974254d8a1a7c 280 SUPERFAMILY SSF55973 1 47 9.42E-11 T 25-04-2016 IPR022636 S-adenosylmethionine synthetase superfamily GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: REACT_13433|UniPathway: UPA00315 RJP_RS06155 02a1accc649694ec63c974254d8a1a7c 280 Pfam PF00438 S-adenosylmethionine synthetase, N-terminal domain 1 39 7.1E-7 T 25-04-2016 IPR022628 S-adenosylmethionine synthetase, N-terminal GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: REACT_13433|UniPathway: UPA00315 RJP_RS06155 02a1accc649694ec63c974254d8a1a7c 280 Gene3D G3DSA:3.30.300.10 1 73 1.1E-14 T 25-04-2016 RJP_RS06155 02a1accc649694ec63c974254d8a1a7c 280 Pfam PF02772 S-adenosylmethionine synthetase, central domain 52 169 2.2E-42 T 25-04-2016 IPR022629 S-adenosylmethionine synthetase, central domain GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: REACT_13433|UniPathway: UPA00315 RJP_RS06155 02a1accc649694ec63c974254d8a1a7c 280 Gene3D G3DSA:3.30.300.10 74 171 7.4E-42 T 25-04-2016 RJP_RS00930 47a3c240486cb03305b8e43ef5d6af5c 596 TIGRFAM TIGR01812 sdhA_frdA_Gneg: succinate dehydrogenase or fumarate reductase, flavoprotein subunit 13 596 5.1E-262 T 25-04-2016 IPR014006 Succinate dehydrogenase/fumarate reductase, flavoprotein subunit GO:0016627|GO:0022900|GO:0050660|GO:0055114 KEGG: 00020+1.3.5.1|KEGG: 00190+1.3.5.1|KEGG: 00650+1.3.5.1|KEGG: 00720+1.3.5.1|MetaCyc: PWY-3781|MetaCyc: PWY-4302|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7279 RJP_RS00930 47a3c240486cb03305b8e43ef5d6af5c 596 SUPERFAMILY SSF46977 454 596 9.16E-51 T 25-04-2016 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal GO:0016491|GO:0055114 RJP_RS00930 47a3c240486cb03305b8e43ef5d6af5c 596 Gene3D G3DSA:3.90.700.10 247 352 3.3E-43 T 25-04-2016 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain RJP_RS00930 47a3c240486cb03305b8e43ef5d6af5c 596 Gene3D G3DSA:1.20.58.100 436 542 2.6E-40 T 25-04-2016 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal GO:0016491|GO:0055114 RJP_RS00930 47a3c240486cb03305b8e43ef5d6af5c 596 TIGRFAM TIGR01816 sdhA_forward: succinate dehydrogenase, flavoprotein subunit 10 596 0.0 T 25-04-2016 IPR011281 Succinate dehydrogenase, flavoprotein subunit GO:0006099|GO:0016627|GO:0050660|GO:0055114 KEGG: 00020+1.3.5.1|KEGG: 00190+1.3.5.1|KEGG: 00650+1.3.5.1|KEGG: 00720+1.3.5.1|MetaCyc: PWY-3781|MetaCyc: PWY-4302|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7279 RJP_RS00930 47a3c240486cb03305b8e43ef5d6af5c 596 Pfam PF00890 FAD binding domain 13 408 6.4E-130 T 25-04-2016 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain RJP_RS00930 47a3c240486cb03305b8e43ef5d6af5c 596 Gene3D G3DSA:3.50.50.60 354 427 7.6E-129 T 25-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RJP_RS00930 47a3c240486cb03305b8e43ef5d6af5c 596 Gene3D G3DSA:3.50.50.60 3 246 7.6E-129 T 25-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RJP_RS00930 47a3c240486cb03305b8e43ef5d6af5c 596 SUPERFAMILY SSF56425 240 358 1.64E-42 T 25-04-2016 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain RJP_RS00930 47a3c240486cb03305b8e43ef5d6af5c 596 Pfam PF02910 Fumarate reductase flavoprotein C-term 463 596 4.6E-43 T 25-04-2016 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal GO:0016491|GO:0055114 RJP_RS00930 47a3c240486cb03305b8e43ef5d6af5c 596 PANTHER PTHR11632:SF51 1 591 0.0 T 25-04-2016 RJP_RS00930 47a3c240486cb03305b8e43ef5d6af5c 596 ProSitePatterns PS00504 Fumarate reductase / succinate dehydrogenase FAD-binding site. 47 56 - T 25-04-2016 IPR003952 Fumarate reductase/succinate dehydrogenase, FAD-binding site GO:0016491|GO:0055114 RJP_RS00930 47a3c240486cb03305b8e43ef5d6af5c 596 PANTHER PTHR11632 1 591 0.0 T 25-04-2016 RJP_RS00930 47a3c240486cb03305b8e43ef5d6af5c 596 PIRSF PIRSF000171 2 585 1.8E-42 T 25-04-2016 IPR030664 Succinate dehydrogenase/fumarate reductase, alpha/adenylylsulphate reductase subunit RJP_RS00930 47a3c240486cb03305b8e43ef5d6af5c 596 Gene3D G3DSA:4.10.80.40 543 596 5.3E-28 T 25-04-2016 RJP_RS00930 47a3c240486cb03305b8e43ef5d6af5c 596 SUPERFAMILY SSF51905 362 438 4.6E-80 T 25-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RJP_RS00930 47a3c240486cb03305b8e43ef5d6af5c 596 SUPERFAMILY SSF51905 8 263 4.6E-80 T 25-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RJP_RS01655 060d967492fef0ad199b01a691bfbc42 579 Gene3D G3DSA:1.25.40.20 455 575 2.2E-11 T 25-04-2016 IPR020683 Ankyrin repeat-containing domain RJP_RS01655 060d967492fef0ad199b01a691bfbc42 579 SUPERFAMILY SSF48403 460 575 7.32E-10 T 25-04-2016 IPR020683 Ankyrin repeat-containing domain RJP_RS05550 ed86f60737a16e35dda3cd4644c64155 228 Pfam PF06508 Queuosine biosynthesis protein QueC 4 219 1.7E-72 T 25-04-2016 IPR018317 Queuosine biosynthesis protein QueC KEGG: 00790+6.3.4.20|MetaCyc: PWY-6703|UniPathway: UPA00391 RJP_RS05550 ed86f60737a16e35dda3cd4644c64155 228 Gene3D G3DSA:3.40.50.620 2 227 7.7E-69 T 25-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold RJP_RS05550 ed86f60737a16e35dda3cd4644c64155 228 Hamap MF_01633 7-cyano-7-deazaguanine synthase [queC]. 3 225 48.158 T 25-04-2016 IPR018317 Queuosine biosynthesis protein QueC KEGG: 00790+6.3.4.20|MetaCyc: PWY-6703|UniPathway: UPA00391 RJP_RS05550 ed86f60737a16e35dda3cd4644c64155 228 PANTHER PTHR11587:SF3 2 228 8.1E-87 T 25-04-2016 RJP_RS05550 ed86f60737a16e35dda3cd4644c64155 228 PANTHER PTHR11587 2 228 8.1E-87 T 25-04-2016 RJP_RS05550 ed86f60737a16e35dda3cd4644c64155 228 TIGRFAM TIGR00364 TIGR00364: queuosine biosynthesis protein QueC 6 212 9.6E-56 T 25-04-2016 IPR018317 Queuosine biosynthesis protein QueC KEGG: 00790+6.3.4.20|MetaCyc: PWY-6703|UniPathway: UPA00391 RJP_RS05550 ed86f60737a16e35dda3cd4644c64155 228 SUPERFAMILY SSF52402 2 227 2.65E-54 T 25-04-2016 RJP_RS05550 ed86f60737a16e35dda3cd4644c64155 228 PIRSF PIRSF006293 1 228 2.1E-77 T 25-04-2016 IPR018317 Queuosine biosynthesis protein QueC KEGG: 00790+6.3.4.20|MetaCyc: PWY-6703|UniPathway: UPA00391 RJP_RS06125 976d5959a71bd3fa16c8107fa6b66d6a 317 Pfam PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal 228 317 4.1E-34 T 25-04-2016 IPR013747 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III, C-terminal KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381|UniPathway: UPA00094 RJP_RS06125 976d5959a71bd3fa16c8107fa6b66d6a 317 PANTHER PTHR34069:SF2 1 317 5.1E-120 T 25-04-2016 RJP_RS06125 976d5959a71bd3fa16c8107fa6b66d6a 317 Hamap MF_01815 3-oxoacyl-[acyl-carrier-protein] synthase 3 [fabH]. 1 317 67.506 T 25-04-2016 IPR004655 3-oxoacyl-[acyl-carrier-protein] synthase 3 GO:0004315|GO:0006633 KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381|UniPathway: UPA00094 RJP_RS06125 976d5959a71bd3fa16c8107fa6b66d6a 317 Pfam PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III 106 184 1.1E-30 T 25-04-2016 IPR013751 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III GO:0004315|GO:0006633 KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381|UniPathway: UPA00094 RJP_RS06125 976d5959a71bd3fa16c8107fa6b66d6a 317 SUPERFAMILY SSF53901 4 317 1.63E-65 T 25-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 RJP_RS06125 976d5959a71bd3fa16c8107fa6b66d6a 317 PANTHER PTHR34069 1 317 5.1E-120 T 25-04-2016 RJP_RS06125 976d5959a71bd3fa16c8107fa6b66d6a 317 Gene3D G3DSA:3.40.47.10 1 160 3.4E-65 T 25-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 RJP_RS06125 976d5959a71bd3fa16c8107fa6b66d6a 317 TIGRFAM TIGR00747 fabH: 3-oxoacyl-[acyl-carrier-protein] synthase III 1 317 1.4E-139 T 25-04-2016 IPR004655 3-oxoacyl-[acyl-carrier-protein] synthase 3 GO:0004315|GO:0006633 KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381|UniPathway: UPA00094 RJP_RS06125 976d5959a71bd3fa16c8107fa6b66d6a 317 Gene3D G3DSA:3.40.47.10 161 317 4.8E-49 T 25-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 RJP_RS06695 07d5e2fc9faf1eef22432fb68ef35ff4 524 Gene3D G3DSA:1.10.8.10 4 88 5.0E-26 T 25-04-2016 RJP_RS06695 07d5e2fc9faf1eef22432fb68ef35ff4 524 TIGRFAM TIGR03534 RF_mod_PrmC: protein-(glutamine-N5) methyltransferase, release factor-specific 27 302 4.5E-82 T 25-04-2016 IPR019874 Protein-(glutamine-N5) methyltransferase, release factor-specific GO:0008168 RJP_RS06695 07d5e2fc9faf1eef22432fb68ef35ff4 524 Gene3D G3DSA:3.40.50.150 90 303 1.9E-60 T 25-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RJP_RS06695 07d5e2fc9faf1eef22432fb68ef35ff4 524 PANTHER PTHR18895:SF64 7 336 1.4E-87 T 25-04-2016 RJP_RS06695 07d5e2fc9faf1eef22432fb68ef35ff4 524 TIGRFAM TIGR00536 hemK_fam: methyltransferase, HemK family 5 303 1.9E-73 T 25-04-2016 IPR004556 Modification methylase HemK GO:0006479|GO:0008276 RJP_RS06695 07d5e2fc9faf1eef22432fb68ef35ff4 524 PANTHER PTHR18895 7 336 1.4E-87 T 25-04-2016 RJP_RS06695 07d5e2fc9faf1eef22432fb68ef35ff4 524 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 210 216 - T 25-04-2016 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 RJP_RS06695 07d5e2fc9faf1eef22432fb68ef35ff4 524 Hamap MF_01057 tRNA (guanine-N(7)-)-methyltransferase [trmB]. 314 520 24.729 T 25-04-2016 IPR003358 tRNA (guanine-N-7) methyltransferase, Trmb type GO:0006400|GO:0008176 UniPathway: UPA00989 RJP_RS06695 07d5e2fc9faf1eef22432fb68ef35ff4 524 Pfam PF05175 Methyltransferase small domain 140 230 2.0E-16 T 25-04-2016 IPR007848 Methyltransferase small domain GO:0008168 RJP_RS06695 07d5e2fc9faf1eef22432fb68ef35ff4 524 SUPERFAMILY SSF53335 13 291 7.62E-55 T 25-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RJP_RS06695 07d5e2fc9faf1eef22432fb68ef35ff4 524 TIGRFAM TIGR00091 TIGR00091: tRNA (guanine-N(7)-)-methyltransferase 341 518 4.9E-37 T 25-04-2016 IPR003358 tRNA (guanine-N-7) methyltransferase, Trmb type GO:0006400|GO:0008176 UniPathway: UPA00989 RJP_RS06695 07d5e2fc9faf1eef22432fb68ef35ff4 524 Gene3D G3DSA:3.40.50.150 349 489 1.6E-7 T 25-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RJP_RS06695 07d5e2fc9faf1eef22432fb68ef35ff4 524 Pfam PF02390 Putative methyltransferase 348 511 1.0E-49 T 25-04-2016 IPR003358 tRNA (guanine-N-7) methyltransferase, Trmb type GO:0006400|GO:0008176 UniPathway: UPA00989 RJP_RS06695 07d5e2fc9faf1eef22432fb68ef35ff4 524 SUPERFAMILY SSF53335 340 512 4.42E-20 T 25-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RJP_RS06695 07d5e2fc9faf1eef22432fb68ef35ff4 524 Hamap MF_02126 Release factor glutamine methyltransferase [prmC]. 5 306 39.89 T 25-04-2016 IPR019874 Protein-(glutamine-N5) methyltransferase, release factor-specific GO:0008168 RJP_RS01690 6ef564e7a3a9399445fab842b6428ce5 155 PANTHER PTHR11545 2 145 3.7E-59 T 25-04-2016 IPR005822 Ribosomal protein L13 GO:0003735|GO:0005840|GO:0006412 RJP_RS01690 6ef564e7a3a9399445fab842b6428ce5 155 TIGRFAM TIGR01066 rplM_bact: ribosomal protein uL13 4 145 2.9E-59 T 25-04-2016 IPR005823 Ribosomal protein L13, bacterial-type GO:0003735|GO:0005840|GO:0006412 RJP_RS01690 6ef564e7a3a9399445fab842b6428ce5 155 ProSitePatterns PS00783 Ribosomal protein L13 signature. 109 131 - T 25-04-2016 IPR023563 Ribosomal protein L13, conserved site GO:0003735|GO:0005840|GO:0006412 RJP_RS01690 6ef564e7a3a9399445fab842b6428ce5 155 PIRSF PIRSF002181 1 155 1.0E-45 T 25-04-2016 IPR005822 Ribosomal protein L13 GO:0003735|GO:0005840|GO:0006412 RJP_RS01690 6ef564e7a3a9399445fab842b6428ce5 155 Pfam PF00572 Ribosomal protein L13 14 141 2.1E-48 T 25-04-2016 IPR005822 Ribosomal protein L13 GO:0003735|GO:0005840|GO:0006412 RJP_RS01690 6ef564e7a3a9399445fab842b6428ce5 155 Hamap MF_01366 50S ribosomal protein L13 [rplM]. 15 145 26.591 T 25-04-2016 IPR005822 Ribosomal protein L13 GO:0003735|GO:0005840|GO:0006412 RJP_RS01690 6ef564e7a3a9399445fab842b6428ce5 155 Gene3D G3DSA:3.90.1180.10 3 145 8.7E-56 T 25-04-2016 IPR023564 Ribosomal protein L13 domain GO:0003735|GO:0005840|GO:0006412 RJP_RS01690 6ef564e7a3a9399445fab842b6428ce5 155 SUPERFAMILY SSF52161 4 147 5.1E-51 T 25-04-2016 IPR023564 Ribosomal protein L13 domain GO:0003735|GO:0005840|GO:0006412 RJP_RS03185 cb78bfda96f35472311c5014d8d198fe 678 Pfam PF00326 Prolyl oligopeptidase family 428 640 2.0E-47 T 25-04-2016 IPR001375 Peptidase S9, prolyl oligopeptidase, catalytic domain GO:0006508|GO:0008236 RJP_RS03185 cb78bfda96f35472311c5014d8d198fe 678 PANTHER PTHR11731 276 651 2.5E-126 T 25-04-2016 RJP_RS03185 cb78bfda96f35472311c5014d8d198fe 678 PANTHER PTHR11731 26 131 2.5E-126 T 25-04-2016 RJP_RS03185 cb78bfda96f35472311c5014d8d198fe 678 PANTHER PTHR11731:SF140 276 651 2.5E-126 T 25-04-2016 RJP_RS03185 cb78bfda96f35472311c5014d8d198fe 678 PANTHER PTHR11731:SF140 26 131 2.5E-126 T 25-04-2016 RJP_RS03185 cb78bfda96f35472311c5014d8d198fe 678 Gene3D G3DSA:3.40.50.1820 377 640 5.2E-70 T 25-04-2016 IPR029058 Alpha/Beta hydrolase fold RJP_RS03185 cb78bfda96f35472311c5014d8d198fe 678 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 495 515 9.4E-6 T 25-04-2016 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 RJP_RS03185 cb78bfda96f35472311c5014d8d198fe 678 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 437 461 9.4E-6 T 25-04-2016 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 RJP_RS03185 cb78bfda96f35472311c5014d8d198fe 678 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 573 595 9.4E-6 T 25-04-2016 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 RJP_RS03185 cb78bfda96f35472311c5014d8d198fe 678 SUPERFAMILY SSF53474 377 640 3.27E-68 T 25-04-2016 IPR029058 Alpha/Beta hydrolase fold RJP_RS03185 cb78bfda96f35472311c5014d8d198fe 678 SUPERFAMILY SSF82171 46 272 1.45E-15 T 25-04-2016 RJP_RS03185 cb78bfda96f35472311c5014d8d198fe 678 SUPERFAMILY SSF82171 320 373 1.45E-15 T 25-04-2016 RJP_RS03185 cb78bfda96f35472311c5014d8d198fe 678 Gene3D G3DSA:2.130.10.10 31 313 2.9E-24 T 25-04-2016 IPR015943 WD40/YVTN repeat-like-containing domain GO:0005515 RJP_RS03185 cb78bfda96f35472311c5014d8d198fe 678 Gene3D G3DSA:2.130.10.10 348 353 2.9E-24 T 25-04-2016 IPR015943 WD40/YVTN repeat-like-containing domain GO:0005515 RJP_RS03630 c3d3b9fffa3b69224b66c6da1696e94e 412 PANTHER PTHR23151:SF56 5 412 6.9E-213 T 25-04-2016 RJP_RS03630 c3d3b9fffa3b69224b66c6da1696e94e 412 Pfam PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) 184 411 3.5E-86 T 25-04-2016 IPR001078 2-oxoacid dehydrogenase acyltransferase, catalytic domain GO:0008152|GO:0016746 RJP_RS03630 c3d3b9fffa3b69224b66c6da1696e94e 412 SUPERFAMILY SSF47005 125 169 2.09E-10 T 25-04-2016 IPR004167 E3-binding domain GO:0008152|GO:0016746 RJP_RS03630 c3d3b9fffa3b69224b66c6da1696e94e 412 Gene3D G3DSA:2.40.50.100 1 92 1.1E-33 T 25-04-2016 RJP_RS03630 c3d3b9fffa3b69224b66c6da1696e94e 412 ProSitePatterns PS00189 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 27 56 - T 25-04-2016 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site RJP_RS03630 c3d3b9fffa3b69224b66c6da1696e94e 412 TIGRFAM TIGR01349 PDHac_trf_mito: pyruvate dehydrogenase complex dihydrolipoamide acetyltransferase 4 412 2.4E-171 T 25-04-2016 IPR006257 Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex GO:0004742|GO:0006090|GO:0045254 KEGG: 00010+2.3.1.12|KEGG: 00020+2.3.1.12|KEGG: 00620+2.3.1.12 RJP_RS03630 c3d3b9fffa3b69224b66c6da1696e94e 412 SUPERFAMILY SSF52777 184 411 2.8E-84 T 25-04-2016 RJP_RS03630 c3d3b9fffa3b69224b66c6da1696e94e 412 Pfam PF00364 Biotin-requiring enzyme 5 77 1.3E-18 T 25-04-2016 IPR000089 Biotin/lipoyl attachment RJP_RS03630 c3d3b9fffa3b69224b66c6da1696e94e 412 Gene3D G3DSA:3.30.559.10 181 411 5.5E-91 T 25-04-2016 IPR023213 Chloramphenicol acetyltransferase-like domain RJP_RS03630 c3d3b9fffa3b69224b66c6da1696e94e 412 Gene3D G3DSA:4.10.320.10 128 172 8.7E-16 T 25-04-2016 IPR004167 E3-binding domain GO:0008152|GO:0016746 RJP_RS03630 c3d3b9fffa3b69224b66c6da1696e94e 412 PANTHER PTHR23151 5 412 6.9E-213 T 25-04-2016 RJP_RS03630 c3d3b9fffa3b69224b66c6da1696e94e 412 Pfam PF02817 e3 binding domain 131 166 1.2E-12 T 25-04-2016 IPR004167 E3-binding domain GO:0008152|GO:0016746 RJP_RS03630 c3d3b9fffa3b69224b66c6da1696e94e 412 SUPERFAMILY SSF51230 1 94 8.38E-28 T 25-04-2016 IPR011053 Single hybrid motif RJP_RS00765 09eec31d5c0aa348ef71b7a067bb335a 212 SUPERFAMILY SSF52540 31 208 1.57E-35 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RJP_RS00765 09eec31d5c0aa348ef71b7a067bb335a 212 PANTHER PTHR11649 19 206 1.2E-44 T 25-04-2016 RJP_RS00765 09eec31d5c0aa348ef71b7a067bb335a 212 Gene3D G3DSA:3.40.50.300 30 209 2.2E-38 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RJP_RS00765 09eec31d5c0aa348ef71b7a067bb335a 212 Hamap MF_00321 Probable GTP-binding protein EngB [engB]. 27 208 26.258 T 25-04-2016 IPR019987 GTP-binding protein, ribosome biogenesis, YsxC GO:0000917|GO:0005525 RJP_RS00765 09eec31d5c0aa348ef71b7a067bb335a 212 TIGRFAM TIGR03598 GTPase_YsxC: ribosome biogenesis GTP-binding protein YsxC 22 204 4.3E-64 T 25-04-2016 IPR019987 GTP-binding protein, ribosome biogenesis, YsxC GO:0000917|GO:0005525 RJP_RS00765 09eec31d5c0aa348ef71b7a067bb335a 212 Pfam PF01926 50S ribosome-binding GTPase 41 159 2.0E-22 T 25-04-2016 IPR006073 GTP binding domain GO:0005525 RJP_RS00020 f0dceffcd7ef990bcb57ed843b10c300 105 PANTHER PTHR10438:SF256 7 105 2.5E-44 T 25-04-2016 RJP_RS00020 f0dceffcd7ef990bcb57ed843b10c300 105 PRINTS PR00421 Thioredoxin family signature 21 29 8.5E-10 T 25-04-2016 RJP_RS00020 f0dceffcd7ef990bcb57ed843b10c300 105 PRINTS PR00421 Thioredoxin family signature 29 38 8.5E-10 T 25-04-2016 RJP_RS00020 f0dceffcd7ef990bcb57ed843b10c300 105 PRINTS PR00421 Thioredoxin family signature 69 80 8.5E-10 T 25-04-2016 RJP_RS00020 f0dceffcd7ef990bcb57ed843b10c300 105 TIGRFAM TIGR01068 thioredoxin: thioredoxin 7 104 5.1E-42 T 25-04-2016 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 RJP_RS00020 f0dceffcd7ef990bcb57ed843b10c300 105 ProSitePatterns PS00194 Thioredoxin family active site. 22 40 - T 25-04-2016 IPR017937 Thioredoxin, conserved site GO:0045454 RJP_RS00020 f0dceffcd7ef990bcb57ed843b10c300 105 PIRSF PIRSF000077 1 105 2.5E-44 T 25-04-2016 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 RJP_RS00020 f0dceffcd7ef990bcb57ed843b10c300 105 SUPERFAMILY SSF52833 7 103 8.09E-37 T 25-04-2016 IPR012336 Thioredoxin-like fold RJP_RS00020 f0dceffcd7ef990bcb57ed843b10c300 105 Gene3D G3DSA:3.40.30.10 5 103 1.1E-37 T 25-04-2016 IPR012336 Thioredoxin-like fold RJP_RS00020 f0dceffcd7ef990bcb57ed843b10c300 105 PANTHER PTHR10438 7 105 2.5E-44 T 25-04-2016 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 RJP_RS00020 f0dceffcd7ef990bcb57ed843b10c300 105 Pfam PF00085 Thioredoxin 5 103 8.0E-33 T 25-04-2016 IPR013766 Thioredoxin domain GO:0045454 RJP_RS00420 fd4789222b289178ca8c28ca8c982e8f 406 PANTHER PTHR12049:SF7 11 349 8.8E-70 T 25-04-2016 RJP_RS00420 fd4789222b289178ca8c28ca8c982e8f 406 PANTHER PTHR12049:SF7 392 406 8.8E-70 T 25-04-2016 RJP_RS00420 fd4789222b289178ca8c28ca8c982e8f 406 SUPERFAMILY SSF53335 6 337 2.0E-89 T 25-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RJP_RS00420 fd4789222b289178ca8c28ca8c982e8f 406 PANTHER PTHR12049 11 349 8.8E-70 T 25-04-2016 IPR003788 Putative S-adenosyl-L-methionine-dependent methyltransferase MidA RJP_RS00420 fd4789222b289178ca8c28ca8c982e8f 406 PANTHER PTHR12049 392 406 8.8E-70 T 25-04-2016 IPR003788 Putative S-adenosyl-L-methionine-dependent methyltransferase MidA RJP_RS00420 fd4789222b289178ca8c28ca8c982e8f 406 Pfam PF02636 Putative S-adenosyl-L-methionine-dependent methyltransferase 61 300 5.7E-55 T 25-04-2016 IPR003788 Putative S-adenosyl-L-methionine-dependent methyltransferase MidA RJP_RS00420 fd4789222b289178ca8c28ca8c982e8f 406 TIGRFAM TIGR01045 RPE1: rickettsial palindromic element RPE1 domain 329 376 4.3E-28 T 25-04-2016 IPR005728 Rickettsial palindromic element RJP_RS02455 3716c889e91ca36d21bbf0e3edfb22c8 284 SUPERFAMILY SSF51735 1 281 8.23E-57 T 25-04-2016 IPR016040 NAD(P)-binding domain RJP_RS02455 3716c889e91ca36d21bbf0e3edfb22c8 284 Gene3D G3DSA:3.40.50.720 1 238 2.5E-29 T 25-04-2016 IPR016040 NAD(P)-binding domain RJP_RS02455 3716c889e91ca36d21bbf0e3edfb22c8 284 PANTHER PTHR10491 1 280 1.2E-49 T 25-04-2016 IPR005913 dTDP-4-dehydrorhamnose reductase family RJP_RS02455 3716c889e91ca36d21bbf0e3edfb22c8 284 PANTHER PTHR10491:SF4 1 280 1.2E-49 T 25-04-2016 RJP_RS02455 3716c889e91ca36d21bbf0e3edfb22c8 284 Pfam PF04321 RmlD substrate binding domain 1 281 3.0E-27 T 25-04-2016 IPR029903 RmlD-like substrate binding domain RJP_RS03200 1e3664aea99c62f92bc0524201d99bd1 120 Hamap MF_00003 Ribosome-binding factor A [rbfA]. 7 120 14.68 T 25-04-2016 IPR000238 Ribosome-binding factor A GO:0006364 RJP_RS03200 1e3664aea99c62f92bc0524201d99bd1 120 ProDom PD007327 FACTOR A RIBOSOME-BINDING PROCESSING RRNA 3D-STRUCTURE RIBOSOMAL-BINDING PRECURSOR A RBFA 13 104 4.0E-46 T 25-04-2016 IPR000238 Ribosome-binding factor A GO:0006364 RJP_RS03200 1e3664aea99c62f92bc0524201d99bd1 120 Pfam PF02033 Ribosome-binding factor A 11 117 1.5E-19 T 25-04-2016 IPR000238 Ribosome-binding factor A GO:0006364 RJP_RS03200 1e3664aea99c62f92bc0524201d99bd1 120 ProSitePatterns PS01319 Ribosome-binding factor A signature. 83 104 - T 25-04-2016 IPR020053 Ribosome-binding factor A, conserved site GO:0006364 RJP_RS03200 1e3664aea99c62f92bc0524201d99bd1 120 Gene3D G3DSA:3.30.300.20 8 119 7.0E-23 T 25-04-2016 IPR015946 K homology domain-like, alpha/beta RJP_RS03200 1e3664aea99c62f92bc0524201d99bd1 120 TIGRFAM TIGR00082 rbfA: ribosome-binding factor A 9 120 2.8E-15 T 25-04-2016 IPR000238 Ribosome-binding factor A GO:0006364 RJP_RS03200 1e3664aea99c62f92bc0524201d99bd1 120 PANTHER PTHR33515 8 120 2.6E-17 T 25-04-2016 RJP_RS03200 1e3664aea99c62f92bc0524201d99bd1 120 SUPERFAMILY SSF89919 6 119 9.81E-28 T 25-04-2016 IPR023799 Ribosome-binding factor A domain RJP_RS03075 ce6d2182b30105dee66e86dd27c9dca7 349 Hamap MF_00281 Phenylalanine--tRNA ligase alpha subunit [pheS]. 8 333 46.586 T 25-04-2016 IPR022911 Phenylalanine-tRNA ligase alpha chain 1, bacterial GO:0004826 KEGG: 00970+6.1.1.20 RJP_RS03075 ce6d2182b30105dee66e86dd27c9dca7 349 Pfam PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain 19 87 1.9E-18 T 25-04-2016 IPR004188 Phenylalanine-tRNA ligase, class II, N-terminal GO:0000166|GO:0004826|GO:0005524|GO:0005737|GO:0006432 KEGG: 00970+6.1.1.20 RJP_RS03075 ce6d2182b30105dee66e86dd27c9dca7 349 Gene3D G3DSA:3.30.930.10 12 334 3.6E-126 T 25-04-2016 RJP_RS03075 ce6d2182b30105dee66e86dd27c9dca7 349 SUPERFAMILY SSF55681 91 334 4.23E-79 T 25-04-2016 RJP_RS03075 ce6d2182b30105dee66e86dd27c9dca7 349 Pfam PF01409 tRNA synthetases class II core domain (F) 91 332 5.4E-107 T 25-04-2016 IPR002319 Phenylalanyl-tRNA synthetase GO:0000049|GO:0004812|GO:0005524|GO:0005737|GO:0043039 KEGG: 00970+6.1.1.20 RJP_RS03075 ce6d2182b30105dee66e86dd27c9dca7 349 SUPERFAMILY SSF46589 15 99 1.15E-16 T 25-04-2016 IPR010978 tRNA-binding arm GO:0000166 Reactome: REACT_71 RJP_RS03075 ce6d2182b30105dee66e86dd27c9dca7 349 PANTHER PTHR11538:SF40 92 331 5.8E-97 T 25-04-2016 RJP_RS03075 ce6d2182b30105dee66e86dd27c9dca7 349 TIGRFAM TIGR00468 pheS: phenylalanine--tRNA ligase, alpha subunit 41 333 8.9E-105 T 25-04-2016 IPR004529 Phenylalanyl-tRNA synthetase, class IIc, alpha subunit GO:0000166|GO:0004826|GO:0005524|GO:0005737|GO:0006432 KEGG: 00970+6.1.1.20 RJP_RS03075 ce6d2182b30105dee66e86dd27c9dca7 349 PANTHER PTHR11538 92 331 5.8E-97 T 25-04-2016 RJP_RS03730 a24b03cd5aa690285cc32a2514d386c1 201 PANTHER PTHR10381:SF11 1 193 5.2E-134 T 25-04-2016 RJP_RS03730 a24b03cd5aa690285cc32a2514d386c1 201 Gene3D G3DSA:3.90.226.10 3 193 3.7E-87 T 25-04-2016 IPR029045 ClpP/crotonase-like domain RJP_RS03730 a24b03cd5aa690285cc32a2514d386c1 201 ProSitePatterns PS00382 Endopeptidase Clp histidine active site. 112 125 - T 25-04-2016 IPR033135 ClpP, histidine active site RJP_RS03730 a24b03cd5aa690285cc32a2514d386c1 201 Pfam PF00574 Clp protease 12 192 8.6E-87 T 25-04-2016 IPR023562 Clp protease proteolytic subunit /Translocation-enhancing protein TepA RJP_RS03730 a24b03cd5aa690285cc32a2514d386c1 201 SUPERFAMILY SSF52096 11 197 6.5E-73 T 25-04-2016 IPR029045 ClpP/crotonase-like domain RJP_RS03730 a24b03cd5aa690285cc32a2514d386c1 201 PRINTS PR00127 Clp protease catalytic subunit P signature 19 34 1.1E-50 T 25-04-2016 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 RJP_RS03730 a24b03cd5aa690285cc32a2514d386c1 201 PRINTS PR00127 Clp protease catalytic subunit P signature 111 130 1.1E-50 T 25-04-2016 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 RJP_RS03730 a24b03cd5aa690285cc32a2514d386c1 201 PRINTS PR00127 Clp protease catalytic subunit P signature 90 107 1.1E-50 T 25-04-2016 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 RJP_RS03730 a24b03cd5aa690285cc32a2514d386c1 201 PRINTS PR00127 Clp protease catalytic subunit P signature 168 187 1.1E-50 T 25-04-2016 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 RJP_RS03730 a24b03cd5aa690285cc32a2514d386c1 201 PRINTS PR00127 Clp protease catalytic subunit P signature 59 79 1.1E-50 T 25-04-2016 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 RJP_RS03730 a24b03cd5aa690285cc32a2514d386c1 201 TIGRFAM TIGR00493 clpP: ATP-dependent Clp endopeptidase, proteolytic subunit ClpP 1 191 6.2E-97 T 25-04-2016 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 RJP_RS03730 a24b03cd5aa690285cc32a2514d386c1 201 Hamap MF_00444 ATP-dependent Clp protease proteolytic subunit [clpP]. 3 193 41.596 T 25-04-2016 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 RJP_RS03730 a24b03cd5aa690285cc32a2514d386c1 201 ProSitePatterns PS00381 Endopeptidase Clp serine active site. 90 101 - T 25-04-2016 IPR018215 ClpP, Ser active site RJP_RS03730 a24b03cd5aa690285cc32a2514d386c1 201 PANTHER PTHR10381 1 193 5.2E-134 T 25-04-2016 IPR023562 Clp protease proteolytic subunit /Translocation-enhancing protein TepA RJP_RS00770 e9f6c49050d6701826d8927f0784bd26 307 PANTHER PTHR23342 47 233 1.6E-16 T 25-04-2016 RJP_RS00770 e9f6c49050d6701826d8927f0784bd26 307 Pfam PF00696 Amino acid kinase family 47 245 2.3E-6 T 25-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 RJP_RS00770 e9f6c49050d6701826d8927f0784bd26 307 Gene3D G3DSA:3.40.1160.10 44 302 2.5E-27 T 25-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 RJP_RS00770 e9f6c49050d6701826d8927f0784bd26 307 SUPERFAMILY SSF53633 24 302 1.48E-30 T 25-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 RJP_RS00770 e9f6c49050d6701826d8927f0784bd26 307 PIRSF PIRSF000728 19 307 1.3E-64 T 25-04-2016 IPR004662 Acetylglutamate kinase GO:0003991|GO:0005737|GO:0006526 KEGG: 00220+2.7.2.8|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 RJP_RS02610 e1cee58e2bfff73ce21bfd50c5f8f9ff 174 Pfam PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit 47 156 7.1E-22 T 25-04-2016 IPR006137 NADH:ubiquinone oxidoreductase-like, 20kDa subunit GO:0051536|GO:0055114 RJP_RS02610 e1cee58e2bfff73ce21bfd50c5f8f9ff 174 TIGRFAM TIGR01957 nuoB_fam: NADH-quinone oxidoreductase, B subunit 21 162 1.5E-77 T 25-04-2016 IPR006138 NADH-ubiquinone oxidoreductase, 20 Kd subunit GO:0008137|GO:0048038|GO:0051539|GO:0055114 RJP_RS02610 e1cee58e2bfff73ce21bfd50c5f8f9ff 174 SUPERFAMILY SSF56770 19 164 2.35E-67 T 25-04-2016 RJP_RS02610 e1cee58e2bfff73ce21bfd50c5f8f9ff 174 ProSitePatterns PS01150 Respiratory-chain NADH dehydrogenase 20 Kd subunit signature. 128 144 - T 25-04-2016 IPR006138 NADH-ubiquinone oxidoreductase, 20 Kd subunit GO:0008137|GO:0048038|GO:0051539|GO:0055114 RJP_RS02610 e1cee58e2bfff73ce21bfd50c5f8f9ff 174 PANTHER PTHR11995:SF19 21 163 2.2E-121 T 25-04-2016 RJP_RS02610 e1cee58e2bfff73ce21bfd50c5f8f9ff 174 PANTHER PTHR11995 21 163 2.2E-121 T 25-04-2016 RJP_RS02610 e1cee58e2bfff73ce21bfd50c5f8f9ff 174 Gene3D G3DSA:3.40.50.700 32 160 3.3E-33 T 25-04-2016 IPR006137 NADH:ubiquinone oxidoreductase-like, 20kDa subunit GO:0051536|GO:0055114 RJP_RS02610 e1cee58e2bfff73ce21bfd50c5f8f9ff 174 Hamap MF_01356 NAD(P)H-quinone oxidoreductase subunit K, chloroplastic [ndhK]. 10 161 42.798 T 25-04-2016 IPR006138 NADH-ubiquinone oxidoreductase, 20 Kd subunit GO:0008137|GO:0048038|GO:0051539|GO:0055114 RJP_RS00855 16b093e917c59160a809b52429599145 266 Gene3D G3DSA:2.10.109.10 186 232 3.1E-40 T 25-04-2016 IPR028360 Peptidase S24/S26, beta-ribbon domain RJP_RS00855 16b093e917c59160a809b52429599145 266 Gene3D G3DSA:2.10.109.10 30 116 3.1E-40 T 25-04-2016 IPR028360 Peptidase S24/S26, beta-ribbon domain RJP_RS00855 16b093e917c59160a809b52429599145 266 PANTHER PTHR12383 85 152 4.7E-56 T 25-04-2016 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 RJP_RS00855 16b093e917c59160a809b52429599145 266 PANTHER PTHR12383 20 66 4.7E-56 T 25-04-2016 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 RJP_RS00855 16b093e917c59160a809b52429599145 266 PANTHER PTHR12383 168 264 4.7E-56 T 25-04-2016 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 RJP_RS00855 16b093e917c59160a809b52429599145 266 TIGRFAM TIGR02227 sigpep_I_bact: signal peptidase I 21 227 2.9E-46 T 25-04-2016 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 RJP_RS00855 16b093e917c59160a809b52429599145 266 SUPERFAMILY SSF51306 32 259 1.57E-51 T 25-04-2016 IPR015927 Peptidase S24/S26A/S26B/S26C RJP_RS00855 16b093e917c59160a809b52429599145 266 Pfam PF00717 Peptidase S24-like 40 130 2.3E-21 T 25-04-2016 IPR019759 Peptidase S24/S26A/S26B RJP_RS00855 16b093e917c59160a809b52429599145 266 PANTHER PTHR12383:SF27 85 152 4.7E-56 T 25-04-2016 RJP_RS00855 16b093e917c59160a809b52429599145 266 PANTHER PTHR12383:SF27 20 66 4.7E-56 T 25-04-2016 RJP_RS00855 16b093e917c59160a809b52429599145 266 PANTHER PTHR12383:SF27 168 264 4.7E-56 T 25-04-2016 RJP_RS00855 16b093e917c59160a809b52429599145 266 ProSitePatterns PS00760 Signal peptidases I lysine active site. 108 120 - T 25-04-2016 IPR019757 Peptidase S26A, signal peptidase I, lysine active site GO:0008236|GO:0016021 RJP_RS00855 16b093e917c59160a809b52429599145 266 ProSitePatterns PS00761 Signal peptidases I signature 3. 191 204 - T 25-04-2016 IPR019758 Peptidase S26A, signal peptidase I, conserved site GO:0008236|GO:0016021 RJP_RS00855 16b093e917c59160a809b52429599145 266 PRINTS PR00727 Bacterial leader peptidase 1 (S26A) family signature 186 205 7.8E-21 T 25-04-2016 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 RJP_RS00855 16b093e917c59160a809b52429599145 266 PRINTS PR00727 Bacterial leader peptidase 1 (S26A) family signature 34 50 7.8E-21 T 25-04-2016 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 RJP_RS00855 16b093e917c59160a809b52429599145 266 PRINTS PR00727 Bacterial leader peptidase 1 (S26A) family signature 106 118 7.8E-21 T 25-04-2016 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 RJP_RS06385 a454325f1721f53aa8a6eb4ba6f643b4 79 Gene3D G3DSA:3.30.70.1500 2 73 2.3E-17 T 25-04-2016 RJP_RS06385 a454325f1721f53aa8a6eb4ba6f643b4 79 PIRSF PIRSF003113 1 79 2.0E-18 T 25-04-2016 IPR002634 BolA protein RJP_RS06385 a454325f1721f53aa8a6eb4ba6f643b4 79 Pfam PF01722 BolA-like protein 27 75 4.9E-12 T 25-04-2016 IPR002634 BolA protein RJP_RS06385 a454325f1721f53aa8a6eb4ba6f643b4 79 SUPERFAMILY SSF82657 3 78 7.98E-19 T 25-04-2016 IPR002634 BolA protein RJP_RS01085 d7ac210098498efa90209fb7cdaf3dd7 67 ProDom PD195599 RP158 1 67 3.0E-32 T 25-04-2016 IPR024246 Protein of unknown function DUF2674 RJP_RS01085 d7ac210098498efa90209fb7cdaf3dd7 67 Pfam PF10879 Protein of unknown function (DUF2674) 1 67 1.1E-43 T 25-04-2016 IPR024246 Protein of unknown function DUF2674 RJP_RS03745 e197bb69934a0befa52519a52e6db0c4 342 PIRSF PIRSF003314 5 342 3.8E-123 T 25-04-2016 IPR011179 Isopentenyl-diphosphate delta-isomerase, FMN-dependent GO:0004452|GO:0005737|GO:0008299|GO:0010181 KEGG: 00900+5.3.3.2|MetaCyc: PWY-5123|MetaCyc: PWY-6174|MetaCyc: PWY-6383|MetaCyc: PWY-6859|MetaCyc: PWY-7102|MetaCyc: PWY-7391|MetaCyc: PWY-7524|MetaCyc: PWY-7560|MetaCyc: PWY-922 RJP_RS03745 e197bb69934a0befa52519a52e6db0c4 342 SUPERFAMILY SSF51395 30 338 1.55E-75 T 25-04-2016 RJP_RS03745 e197bb69934a0befa52519a52e6db0c4 342 Gene3D G3DSA:3.20.20.70 29 340 6.4E-119 T 25-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 RJP_RS03745 e197bb69934a0befa52519a52e6db0c4 342 TIGRFAM TIGR02151 IPP_isom_2: isopentenyl-diphosphate delta-isomerase, type 2 10 340 1.7E-133 T 25-04-2016 IPR011179 Isopentenyl-diphosphate delta-isomerase, FMN-dependent GO:0004452|GO:0005737|GO:0008299|GO:0010181 KEGG: 00900+5.3.3.2|MetaCyc: PWY-5123|MetaCyc: PWY-6174|MetaCyc: PWY-6383|MetaCyc: PWY-6859|MetaCyc: PWY-7102|MetaCyc: PWY-7391|MetaCyc: PWY-7524|MetaCyc: PWY-7560|MetaCyc: PWY-922 RJP_RS03745 e197bb69934a0befa52519a52e6db0c4 342 Hamap MF_00354 Isopentenyl-diphosphate delta-isomerase [fni]. 8 342 39.445 T 25-04-2016 IPR011179 Isopentenyl-diphosphate delta-isomerase, FMN-dependent GO:0004452|GO:0005737|GO:0008299|GO:0010181 KEGG: 00900+5.3.3.2|MetaCyc: PWY-5123|MetaCyc: PWY-6174|MetaCyc: PWY-6383|MetaCyc: PWY-6859|MetaCyc: PWY-7102|MetaCyc: PWY-7391|MetaCyc: PWY-7524|MetaCyc: PWY-7560|MetaCyc: PWY-922 RJP_RS03745 e197bb69934a0befa52519a52e6db0c4 342 PANTHER PTHR10578:SF3 248 340 1.1E-109 T 25-04-2016 IPR011179 Isopentenyl-diphosphate delta-isomerase, FMN-dependent GO:0004452|GO:0005737|GO:0008299|GO:0010181 KEGG: 00900+5.3.3.2|MetaCyc: PWY-5123|MetaCyc: PWY-6174|MetaCyc: PWY-6383|MetaCyc: PWY-6859|MetaCyc: PWY-7102|MetaCyc: PWY-7391|MetaCyc: PWY-7524|MetaCyc: PWY-7560|MetaCyc: PWY-922 RJP_RS03745 e197bb69934a0befa52519a52e6db0c4 342 PANTHER PTHR10578:SF3 30 226 1.1E-109 T 25-04-2016 IPR011179 Isopentenyl-diphosphate delta-isomerase, FMN-dependent GO:0004452|GO:0005737|GO:0008299|GO:0010181 KEGG: 00900+5.3.3.2|MetaCyc: PWY-5123|MetaCyc: PWY-6174|MetaCyc: PWY-6383|MetaCyc: PWY-6859|MetaCyc: PWY-7102|MetaCyc: PWY-7391|MetaCyc: PWY-7524|MetaCyc: PWY-7560|MetaCyc: PWY-922 RJP_RS03745 e197bb69934a0befa52519a52e6db0c4 342 PANTHER PTHR10578 248 340 1.1E-109 T 25-04-2016 RJP_RS03745 e197bb69934a0befa52519a52e6db0c4 342 PANTHER PTHR10578 30 226 1.1E-109 T 25-04-2016 RJP_RS03745 e197bb69934a0befa52519a52e6db0c4 342 Pfam PF01070 FMN-dependent dehydrogenase 170 340 2.8E-14 T 25-04-2016 IPR000262 FMN-dependent dehydrogenase GO:0016491 RJP_RS03745 e197bb69934a0befa52519a52e6db0c4 342 Pfam PF01070 FMN-dependent dehydrogenase 29 101 5.8E-9 T 25-04-2016 IPR000262 FMN-dependent dehydrogenase GO:0016491 RJP_RS00905 77c1430bd71719a2a16e49262aaa7da9 286 PANTHER PTHR10264 8 283 1.7E-82 T 25-04-2016 IPR001972 Stomatin family GO:0016020 RJP_RS00905 77c1430bd71719a2a16e49262aaa7da9 286 TIGRFAM TIGR01932 hflC: HflC protein 139 283 3.2E-41 T 25-04-2016 IPR010200 HflC GO:0016021|GO:0052547 RJP_RS00905 77c1430bd71719a2a16e49262aaa7da9 286 SMART SM00244 21 183 4.8E-49 T 25-04-2016 IPR001107 Band 7 domain RJP_RS00905 77c1430bd71719a2a16e49262aaa7da9 286 PIRSF PIRSF005651 1 286 4.1E-89 T 25-04-2016 IPR010200 HflC GO:0016021|GO:0052547 RJP_RS00905 77c1430bd71719a2a16e49262aaa7da9 286 Pfam PF01145 SPFH domain / Band 7 family 25 199 2.5E-29 T 25-04-2016 IPR001107 Band 7 domain RJP_RS00905 77c1430bd71719a2a16e49262aaa7da9 286 PANTHER PTHR10264:SF80 8 283 1.7E-82 T 25-04-2016 RJP_RS00905 77c1430bd71719a2a16e49262aaa7da9 286 SUPERFAMILY SSF117892 53 190 2.88E-26 T 25-04-2016 IPR001107 Band 7 domain RJP_RS00700 230c051e0c1edb625469e28cead076b9 199 PANTHER PTHR36573 1 198 6.5E-15 T 25-04-2016 RJP_RS00700 230c051e0c1edb625469e28cead076b9 199 Pfam PF05494 MlaC protein 33 196 2.9E-36 T 25-04-2016 IPR008869 Toluene tolerance Ttg2/phospholipid-binding protein MlaC RJP_RS00700 230c051e0c1edb625469e28cead076b9 199 Gene3D G3DSA:1.10.10.640 68 108 6.4E-9 T 25-04-2016 IPR023094 Toluene tolerance protein, alpha-helical RJP_RS00700 230c051e0c1edb625469e28cead076b9 199 Gene3D G3DSA:1.10.10.640 171 198 6.4E-9 T 25-04-2016 IPR023094 Toluene tolerance protein, alpha-helical RJP_RS00700 230c051e0c1edb625469e28cead076b9 199 Gene3D G3DSA:3.10.450.50 30 67 1.2E-8 T 25-04-2016 IPR032710 NTF2-like domain RJP_RS00700 230c051e0c1edb625469e28cead076b9 199 Gene3D G3DSA:3.10.450.50 111 170 1.2E-8 T 25-04-2016 IPR032710 NTF2-like domain RJP_RS04905 d05bbeb1e0c088502d3c0196e22286fb 56 Gene3D G3DSA:3.40.630.30 1 56 1.2E-12 T 25-04-2016 IPR016181 Acyl-CoA N-acyltransferase RJP_RS04905 d05bbeb1e0c088502d3c0196e22286fb 56 SUPERFAMILY SSF55729 1 56 8.39E-11 T 25-04-2016 IPR016181 Acyl-CoA N-acyltransferase RJP_RS05395 cfa85bbf7c8b3653059c3ac554627d73 248 ProSitePatterns PS01183 ubiE/COQ5 methyltransferase family signature 1. 31 46 - T 25-04-2016 IPR023576 UbiE/COQ5 methyltransferase, conserved site GO:0008168 KEGG: 00130+2.1.1.163|KEGG: 00564+2.1.1.16|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895|UniPathway: UPA00079 RJP_RS05395 cfa85bbf7c8b3653059c3ac554627d73 248 TIGRFAM TIGR01934 MenG_MenH_UbiE: ubiquinone/menaquinone biosynthesis methyltransferase 20 246 1.1E-87 T 25-04-2016 IPR004033 UbiE/COQ5 methyltransferase GO:0008168 KEGG: 00130+2.1.1.163|KEGG: 00564+2.1.1.16|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895|UniPathway: UPA00079 RJP_RS05395 cfa85bbf7c8b3653059c3ac554627d73 248 ProSitePatterns PS01184 ubiE/COQ5 methyltransferase family signature 2. 155 169 - T 25-04-2016 IPR023576 UbiE/COQ5 methyltransferase, conserved site GO:0008168 KEGG: 00130+2.1.1.163|KEGG: 00564+2.1.1.16|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895|UniPathway: UPA00079 RJP_RS05395 cfa85bbf7c8b3653059c3ac554627d73 248 Pfam PF01209 ubiE/COQ5 methyltransferase family 16 246 3.3E-83 T 25-04-2016 IPR004033 UbiE/COQ5 methyltransferase GO:0008168 KEGG: 00130+2.1.1.163|KEGG: 00564+2.1.1.16|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895|UniPathway: UPA00079 RJP_RS05395 cfa85bbf7c8b3653059c3ac554627d73 248 Gene3D G3DSA:3.40.50.150 20 244 1.3E-52 T 25-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RJP_RS05395 cfa85bbf7c8b3653059c3ac554627d73 248 PANTHER PTHR10108 1 244 3.4E-112 T 25-04-2016 RJP_RS05395 cfa85bbf7c8b3653059c3ac554627d73 248 SUPERFAMILY SSF53335 17 223 2.26E-42 T 25-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RJP_RS05395 cfa85bbf7c8b3653059c3ac554627d73 248 Hamap MF_01813 Ubiquinone/menaquinone biosynthesis C-methyltransferase UbiE [ubiE]. 11 247 37.322 T 25-04-2016 IPR004033 UbiE/COQ5 methyltransferase GO:0008168 KEGG: 00130+2.1.1.163|KEGG: 00564+2.1.1.16|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895|UniPathway: UPA00079 RJP_RS05395 cfa85bbf7c8b3653059c3ac554627d73 248 PANTHER PTHR10108:SF24 1 244 3.4E-112 T 25-04-2016 RJP_RS05480 5845f70950011304cdc6b60b23155644 401 PANTHER PTHR33295:SF4 18 357 8.3E-53 T 25-04-2016 RJP_RS05480 5845f70950011304cdc6b60b23155644 401 Gene3D G3DSA:3.40.50.300 7 121 1.5E-8 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RJP_RS05480 5845f70950011304cdc6b60b23155644 401 Pfam PF13173 AAA domain 18 143 7.7E-30 T 25-04-2016 RJP_RS05480 5845f70950011304cdc6b60b23155644 401 SUPERFAMILY SSF52540 6 204 2.27E-18 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RJP_RS05480 5845f70950011304cdc6b60b23155644 401 Pfam PF13635 Domain of unknown function (DUF4143) 216 347 5.4E-11 T 25-04-2016 IPR025420 Domain of unknown function DUF4143 RJP_RS05480 5845f70950011304cdc6b60b23155644 401 PANTHER PTHR33295 18 357 8.3E-53 T 25-04-2016 RJP_RS04895 87075350fc91d7f9a2ea4fdbece1d3c7 185 Gene3D G3DSA:3.40.50.1470 1 184 1.1E-67 T 25-04-2016 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 RJP_RS04895 87075350fc91d7f9a2ea4fdbece1d3c7 185 Hamap MF_00083 Peptidyl-tRNA hydrolase [pth]. 1 178 36.042 T 25-04-2016 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 RJP_RS04895 87075350fc91d7f9a2ea4fdbece1d3c7 185 TIGRFAM TIGR00447 pth: aminoacyl-tRNA hydrolase 2 179 9.6E-60 T 25-04-2016 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 RJP_RS04895 87075350fc91d7f9a2ea4fdbece1d3c7 185 PANTHER PTHR17224 1 164 2.2E-65 T 25-04-2016 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 RJP_RS04895 87075350fc91d7f9a2ea4fdbece1d3c7 185 Pfam PF01195 Peptidyl-tRNA hydrolase 3 183 5.0E-54 T 25-04-2016 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 RJP_RS04895 87075350fc91d7f9a2ea4fdbece1d3c7 185 ProSitePatterns PS01195 Peptidyl-tRNA hydrolase signature 1. 14 27 - T 25-04-2016 IPR018171 Peptidyl-tRNA hydrolase, conserved site GO:0004045 MetaCyc: PWY-6308 RJP_RS04895 87075350fc91d7f9a2ea4fdbece1d3c7 185 ProSitePatterns PS01196 Peptidyl-tRNA hydrolase signature 2. 108 118 - T 25-04-2016 IPR018171 Peptidyl-tRNA hydrolase, conserved site GO:0004045 MetaCyc: PWY-6308 RJP_RS04895 87075350fc91d7f9a2ea4fdbece1d3c7 185 SUPERFAMILY SSF53178 1 184 1.44E-65 T 25-04-2016 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 RJP_RS03065 6a9c683095bfa8e12153c0b2ea082181 270 Gene3D G3DSA:3.10.310.10 5 120 9.1E-34 T 25-04-2016 RJP_RS03065 6a9c683095bfa8e12153c0b2ea082181 270 PANTHER PTHR31689 4 270 9.7E-77 T 25-04-2016 IPR001653 Diaminopimelate epimerase, DapF GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097|UniPathway: UPA00034 RJP_RS03065 6a9c683095bfa8e12153c0b2ea082181 270 Hamap MF_00197 Diaminopimelate epimerase [dapF]. 5 268 30.946 T 25-04-2016 IPR001653 Diaminopimelate epimerase, DapF GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097|UniPathway: UPA00034 RJP_RS03065 6a9c683095bfa8e12153c0b2ea082181 270 SUPERFAMILY SSF54506 5 129 3.4E-30 T 25-04-2016 RJP_RS03065 6a9c683095bfa8e12153c0b2ea082181 270 Pfam PF01678 Diaminopimelate epimerase 7 123 2.3E-18 T 25-04-2016 IPR001653 Diaminopimelate epimerase, DapF GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097|UniPathway: UPA00034 RJP_RS03065 6a9c683095bfa8e12153c0b2ea082181 270 Pfam PF01678 Diaminopimelate epimerase 150 260 1.4E-13 T 25-04-2016 IPR001653 Diaminopimelate epimerase, DapF GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097|UniPathway: UPA00034 RJP_RS03065 6a9c683095bfa8e12153c0b2ea082181 270 ProSitePatterns PS01326 Diaminopimelate epimerase signature. 66 80 - T 25-04-2016 IPR018510 Diaminopimelate epimerase, active site GO:0005737|GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097|UniPathway: UPA00034 RJP_RS03065 6a9c683095bfa8e12153c0b2ea082181 270 SUPERFAMILY SSF54506 147 265 9.42E-32 T 25-04-2016 RJP_RS03065 6a9c683095bfa8e12153c0b2ea082181 270 TIGRFAM TIGR00652 DapF: diaminopimelate epimerase 5 267 1.8E-83 T 25-04-2016 IPR001653 Diaminopimelate epimerase, DapF GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097|UniPathway: UPA00034 RJP_RS03065 6a9c683095bfa8e12153c0b2ea082181 270 Gene3D G3DSA:3.10.310.10 121 255 1.0E-29 T 25-04-2016 RJP_RS02180 7f634db4adef601b463769f7ce6a0c60 212 SUPERFAMILY SSF51261 25 210 6.8E-29 T 25-04-2016 IPR011055 Duplicated hybrid motif RJP_RS02180 7f634db4adef601b463769f7ce6a0c60 212 Pfam PF01551 Peptidase family M23 118 206 3.8E-17 T 25-04-2016 IPR016047 Peptidase M23 RJP_RS02180 7f634db4adef601b463769f7ce6a0c60 212 Gene3D G3DSA:2.70.70.10 87 211 2.2E-24 T 25-04-2016 RJP_RS02180 7f634db4adef601b463769f7ce6a0c60 212 PANTHER PTHR21666 66 210 6.7E-13 T 25-04-2016 RJP_RS01580 ab83531aed4e387b7e321b661658758a 236 PANTHER PTHR11609:SF2 1 233 1.3E-53 T 25-04-2016 RJP_RS01580 ab83531aed4e387b7e321b661658758a 236 Gene3D G3DSA:3.30.200.20 2 88 1.4E-22 T 25-04-2016 RJP_RS01580 ab83531aed4e387b7e321b661658758a 236 PANTHER PTHR11609 1 233 1.3E-53 T 25-04-2016 RJP_RS01580 ab83531aed4e387b7e321b661658758a 236 Hamap MF_00137 Phosphoribosylaminoimidazole-succinocarboxamide synthase [purC]. 2 235 24.43 T 25-04-2016 IPR028923 SAICAR synthetase/ADE2, N-terminal KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|UniPathway: UPA00074 RJP_RS01580 ab83531aed4e387b7e321b661658758a 236 Gene3D G3DSA:3.30.470.20 89 212 4.3E-31 T 25-04-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 RJP_RS01580 ab83531aed4e387b7e321b661658758a 236 Pfam PF01259 SAICAR synthetase 3 208 1.9E-33 T 25-04-2016 IPR028923 SAICAR synthetase/ADE2, N-terminal KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|UniPathway: UPA00074 RJP_RS01580 ab83531aed4e387b7e321b661658758a 236 SUPERFAMILY SSF56104 11 234 1.77E-50 T 25-04-2016 RJP_RS06855 712e1e65a06f68e7a8ab26af04538bfb 360 PANTHER PTHR33529:SF2 1 359 8.2E-28 T 25-04-2016 RJP_RS06855 712e1e65a06f68e7a8ab26af04538bfb 360 Pfam PF03739 Predicted permease YjgP/YjgQ family 6 357 1.2E-49 T 25-04-2016 IPR005495 Permease LptG/LptF-related GO:0016021 RJP_RS06855 712e1e65a06f68e7a8ab26af04538bfb 360 PANTHER PTHR33529 1 359 8.2E-28 T 25-04-2016 RJP_RS05335 35443a4ac1fc8a28a067394b072d6cf4 444 Pfam PF13742 OB-fold nucleic acid binding domain 14 106 2.2E-24 T 25-04-2016 IPR025824 OB-fold nucleic acid binding domain GO:0003676 RJP_RS05335 35443a4ac1fc8a28a067394b072d6cf4 444 Pfam PF02601 Exonuclease VII, large subunit 136 440 3.2E-82 T 25-04-2016 IPR020579 Exonuclease VII, large subunit, C-terminal GO:0008855 RJP_RS05335 35443a4ac1fc8a28a067394b072d6cf4 444 TIGRFAM TIGR00237 xseA: exodeoxyribonuclease VII, large subunit 15 441 1.5E-116 T 25-04-2016 IPR003753 Exonuclease VII, large subunit GO:0006308|GO:0008855|GO:0009318 RJP_RS05335 35443a4ac1fc8a28a067394b072d6cf4 444 PANTHER PTHR30008 6 439 1.4E-121 T 25-04-2016 RJP_RS05335 35443a4ac1fc8a28a067394b072d6cf4 444 Hamap MF_00378 Exodeoxyribonuclease 7 large subunit [xseA]. 11 444 26.225 T 25-04-2016 IPR003753 Exonuclease VII, large subunit GO:0006308|GO:0008855|GO:0009318 RJP_RS05335 35443a4ac1fc8a28a067394b072d6cf4 444 PANTHER PTHR30008:SF0 6 439 1.4E-121 T 25-04-2016 RJP_RS05195 ad2bd8ec817d4f84decd6deb66386076 136 SUPERFAMILY SSF54686 1 134 4.58E-50 T 25-04-2016 IPR016180 Ribosomal protein L10e/L16 GO:0003735|GO:0005840|GO:0006412 RJP_RS05195 ad2bd8ec817d4f84decd6deb66386076 136 PRINTS PR00060 Ribosomal protein L16 signature 58 87 3.2E-35 T 25-04-2016 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 RJP_RS05195 ad2bd8ec817d4f84decd6deb66386076 136 PRINTS PR00060 Ribosomal protein L16 signature 42 53 3.2E-35 T 25-04-2016 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 RJP_RS05195 ad2bd8ec817d4f84decd6deb66386076 136 PRINTS PR00060 Ribosomal protein L16 signature 24 36 3.2E-35 T 25-04-2016 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 RJP_RS05195 ad2bd8ec817d4f84decd6deb66386076 136 PRINTS PR00060 Ribosomal protein L16 signature 88 117 3.2E-35 T 25-04-2016 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 RJP_RS05195 ad2bd8ec817d4f84decd6deb66386076 136 Gene3D G3DSA:3.90.1170.10 23 134 1.4E-46 T 25-04-2016 IPR016180 Ribosomal protein L10e/L16 GO:0003735|GO:0005840|GO:0006412 RJP_RS05195 ad2bd8ec817d4f84decd6deb66386076 136 Pfam PF00252 Ribosomal protein L16p/L10e 4 132 2.5E-42 T 25-04-2016 IPR016180 Ribosomal protein L10e/L16 GO:0003735|GO:0005840|GO:0006412 RJP_RS05195 ad2bd8ec817d4f84decd6deb66386076 136 TIGRFAM TIGR01164 rplP_bact: ribosomal protein uL16 2 127 2.5E-53 T 25-04-2016 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 RJP_RS05195 ad2bd8ec817d4f84decd6deb66386076 136 PANTHER PTHR12220 1 134 1.6E-59 T 25-04-2016 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 RJP_RS05195 ad2bd8ec817d4f84decd6deb66386076 136 Hamap MF_01342 50S ribosomal protein L16 [rplP]. 1 134 35.744 T 25-04-2016 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 RJP_RS05195 ad2bd8ec817d4f84decd6deb66386076 136 ProSitePatterns PS00586 Ribosomal protein L16 signature 1. 59 70 - T 25-04-2016 IPR020798 Ribosomal protein L16, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 RJP_RS05195 ad2bd8ec817d4f84decd6deb66386076 136 ProSitePatterns PS00701 Ribosomal protein L16 signature 2. 82 93 - T 25-04-2016 IPR020798 Ribosomal protein L16, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 RJP_RS04920 4239199ec75c4d408792c46612cda725 407 PANTHER PTHR23502 11 398 1.6E-52 T 25-04-2016 RJP_RS04920 4239199ec75c4d408792c46612cda725 407 ProSitePatterns PS00216 Sugar transport proteins signature 1. 62 78 - T 25-04-2016 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 RJP_RS04920 4239199ec75c4d408792c46612cda725 407 TIGRFAM TIGR00710 efflux_Bcr_CflA: drug resistance transporter, Bcr/CflA subfamily 4 395 1.5E-140 T 25-04-2016 IPR004812 Drug resistance transporter Bcr/CmlA subfamily GO:0005215|GO:0006810|GO:0016021 RJP_RS04920 4239199ec75c4d408792c46612cda725 407 SUPERFAMILY SSF103473 7 403 1.7E-54 T 25-04-2016 IPR020846 Major facilitator superfamily domain RJP_RS04920 4239199ec75c4d408792c46612cda725 407 Gene3D G3DSA:1.20.1250.20 10 186 7.1E-23 T 25-04-2016 RJP_RS04920 4239199ec75c4d408792c46612cda725 407 Gene3D G3DSA:1.20.1250.20 206 402 1.8E-14 T 25-04-2016 RJP_RS04920 4239199ec75c4d408792c46612cda725 407 PANTHER PTHR23502:SF19 11 398 1.6E-52 T 25-04-2016 RJP_RS04920 4239199ec75c4d408792c46612cda725 407 Pfam PF07690 Major Facilitator Superfamily 12 360 4.1E-39 T 25-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 RJP_RS00360 1333c17da901c84da9b1788443e34fb0 396 PANTHER PTHR11351 37 291 5.2E-63 T 25-04-2016 RJP_RS00360 1333c17da901c84da9b1788443e34fb0 396 PRINTS PR00075 Fatty acid desaturase family 1 signature 235 249 6.1E-15 T 25-04-2016 IPR015876 Fatty acid desaturase, type 1, core GO:0016717|GO:0055114 RJP_RS00360 1333c17da901c84da9b1788443e34fb0 396 PRINTS PR00075 Fatty acid desaturase family 1 signature 193 214 6.1E-15 T 25-04-2016 IPR015876 Fatty acid desaturase, type 1, core GO:0016717|GO:0055114 RJP_RS00360 1333c17da901c84da9b1788443e34fb0 396 PRINTS PR00075 Fatty acid desaturase family 1 signature 57 77 6.1E-15 T 25-04-2016 IPR015876 Fatty acid desaturase, type 1, core GO:0016717|GO:0055114 RJP_RS00360 1333c17da901c84da9b1788443e34fb0 396 PRINTS PR00075 Fatty acid desaturase family 1 signature 94 123 6.1E-15 T 25-04-2016 IPR015876 Fatty acid desaturase, type 1, core GO:0016717|GO:0055114 RJP_RS00360 1333c17da901c84da9b1788443e34fb0 396 Pfam PF00487 Fatty acid desaturase 50 259 2.1E-16 T 25-04-2016 IPR005804 Fatty acid desaturase domain GO:0006629 RJP_RS03675 dcd58be44bee56003f872c2264bc20f6 248 PANTHER PTHR30283 2 247 4.6E-74 T 25-04-2016 RJP_RS03675 dcd58be44bee56003f872c2264bc20f6 248 Hamap MF_00652 UPF0246 protein YaaA [yaaA]. 1 248 32.186 T 25-04-2016 IPR005583 Peroxide stress protein YaaA RJP_RS03675 dcd58be44bee56003f872c2264bc20f6 248 PANTHER PTHR30283:SF3 2 247 4.6E-74 T 25-04-2016 RJP_RS03675 dcd58be44bee56003f872c2264bc20f6 248 Pfam PF03883 Protein of unknown function (DUF328) 1 236 1.5E-74 T 25-04-2016 IPR005583 Peroxide stress protein YaaA RJP_RS00395 4869eaa4d487f3a5a45fed7c4301026e 61 Pfam PF00145 C-5 cytosine-specific DNA methylase 1 55 2.1E-18 T 25-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RJP_RS00395 4869eaa4d487f3a5a45fed7c4301026e 61 ProSitePatterns PS00094 C-5 cytosine-specific DNA methylases active site. 33 45 - T 25-04-2016 IPR018117 DNA methylase, C-5 cytosine-specific, active site KEGG: 00270+2.1.1.37 RJP_RS00395 4869eaa4d487f3a5a45fed7c4301026e 61 Gene3D G3DSA:3.40.50.150 1 55 1.9E-15 T 25-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RJP_RS00395 4869eaa4d487f3a5a45fed7c4301026e 61 SUPERFAMILY SSF53335 1 55 7.2E-14 T 25-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RJP_RS06985 841afa0eded0aae282879a9a949f305d 346 TIGRFAM TIGR00109 hemH: ferrochelatase 6 313 7.2E-83 T 25-04-2016 IPR001015 Ferrochelatase GO:0004325|GO:0006783 KEGG: 00860+4.99.1.1|UniPathway: UPA00252 RJP_RS06985 841afa0eded0aae282879a9a949f305d 346 Gene3D G3DSA:3.40.50.1400 7 196 3.3E-50 T 25-04-2016 RJP_RS06985 841afa0eded0aae282879a9a949f305d 346 SUPERFAMILY SSF53800 6 324 1.21E-88 T 25-04-2016 RJP_RS06985 841afa0eded0aae282879a9a949f305d 346 Pfam PF00762 Ferrochelatase 9 312 1.1E-93 T 25-04-2016 IPR001015 Ferrochelatase GO:0004325|GO:0006783 KEGG: 00860+4.99.1.1|UniPathway: UPA00252 RJP_RS06985 841afa0eded0aae282879a9a949f305d 346 Gene3D G3DSA:3.40.50.1400 197 314 4.0E-37 T 25-04-2016 RJP_RS06985 841afa0eded0aae282879a9a949f305d 346 PANTHER PTHR11108 4 311 1.1E-94 T 25-04-2016 IPR001015 Ferrochelatase GO:0004325|GO:0006783 KEGG: 00860+4.99.1.1|UniPathway: UPA00252 RJP_RS06985 841afa0eded0aae282879a9a949f305d 346 ProSitePatterns PS00534 Ferrochelatase signature. 187 205 - T 25-04-2016 IPR019772 Ferrochelatase, active site GO:0004325|GO:0006783 KEGG: 00860+4.99.1.1|UniPathway: UPA00252 RJP_RS06985 841afa0eded0aae282879a9a949f305d 346 Hamap MF_00323 Ferrochelatase [hemH]. 7 316 33.473 T 25-04-2016 IPR001015 Ferrochelatase GO:0004325|GO:0006783 KEGG: 00860+4.99.1.1|UniPathway: UPA00252 RJP_RS03080 d96fee219c5da201622c164e8b762dff 818 SMART SM00896 724 817 9.0E-34 T 25-04-2016 IPR005121 Phenylalanine-tRNA ligase, beta subunit, ferrodoxin-fold anticodon-binding GO:0000049|GO:0000287|GO:0004826|GO:0005524|GO:0006432|GO:0008033 KEGG: 00970+6.1.1.20 RJP_RS03080 d96fee219c5da201622c164e8b762dff 818 SUPERFAMILY SSF55681 489 708 7.95E-41 T 25-04-2016 RJP_RS03080 d96fee219c5da201622c164e8b762dff 818 Gene3D G3DSA:3.50.40.10 199 416 1.2E-84 T 25-04-2016 IPR020825 Phenylalanyl-tRNA synthetase, B3/B4 RJP_RS03080 d96fee219c5da201622c164e8b762dff 818 Gene3D G3DSA:3.30.70.380 726 817 3.4E-25 T 25-04-2016 IPR005121 Phenylalanine-tRNA ligase, beta subunit, ferrodoxin-fold anticodon-binding GO:0000049|GO:0000287|GO:0004826|GO:0005524|GO:0006432|GO:0008033 KEGG: 00970+6.1.1.20 RJP_RS03080 d96fee219c5da201622c164e8b762dff 818 SUPERFAMILY SSF46955 426 497 2.11E-17 T 25-04-2016 IPR009061 Putative DNA-binding domain RJP_RS03080 d96fee219c5da201622c164e8b762dff 818 SUPERFAMILY SSF54991 722 817 5.36E-25 T 25-04-2016 IPR005121 Phenylalanine-tRNA ligase, beta subunit, ferrodoxin-fold anticodon-binding GO:0000049|GO:0000287|GO:0004826|GO:0005524|GO:0006432|GO:0008033 KEGG: 00970+6.1.1.20 RJP_RS03080 d96fee219c5da201622c164e8b762dff 818 Pfam PF03147 Ferredoxin-fold anticodon binding domain 724 817 2.2E-23 T 25-04-2016 IPR005121 Phenylalanine-tRNA ligase, beta subunit, ferrodoxin-fold anticodon-binding GO:0000049|GO:0000287|GO:0004826|GO:0005524|GO:0006432|GO:0008033 KEGG: 00970+6.1.1.20 RJP_RS03080 d96fee219c5da201622c164e8b762dff 818 Gene3D G3DSA:3.30.56.10 155 181 1.0E-21 T 25-04-2016 RJP_RS03080 d96fee219c5da201622c164e8b762dff 818 Gene3D G3DSA:3.30.56.10 1 38 1.0E-21 T 25-04-2016 RJP_RS03080 d96fee219c5da201622c164e8b762dff 818 SMART SM00873 212 408 1.2E-70 T 25-04-2016 IPR005146 B3/B4 tRNA-binding domain GO:0003723|GO:0004826 KEGG: 00970+6.1.1.20 RJP_RS03080 d96fee219c5da201622c164e8b762dff 818 Gene3D G3DSA:3.30.56.20 424 497 6.7E-22 T 25-04-2016 IPR005147 tRNA synthetase, B5-domain GO:0000287|GO:0003723|GO:0005524|GO:0006432 KEGG: 00970+6.1.1.20 RJP_RS03080 d96fee219c5da201622c164e8b762dff 818 Gene3D G3DSA:3.30.930.10 514 709 3.7E-48 T 25-04-2016 RJP_RS03080 d96fee219c5da201622c164e8b762dff 818 SUPERFAMILY SSF56037 201 420 1.33E-57 T 25-04-2016 IPR020825 Phenylalanyl-tRNA synthetase, B3/B4 RJP_RS03080 d96fee219c5da201622c164e8b762dff 818 Pfam PF03483 B3/4 domain 212 408 1.1E-52 T 25-04-2016 IPR005146 B3/B4 tRNA-binding domain GO:0003723|GO:0004826 KEGG: 00970+6.1.1.20 RJP_RS03080 d96fee219c5da201622c164e8b762dff 818 Pfam PF01588 Putative tRNA binding domain 46 145 1.0E-21 T 25-04-2016 IPR002547 tRNA-binding domain GO:0000049 Reactome: REACT_71 RJP_RS03080 d96fee219c5da201622c164e8b762dff 818 Gene3D G3DSA:2.40.50.140 40 154 1.4E-36 T 25-04-2016 IPR012340 Nucleic acid-binding, OB-fold RJP_RS03080 d96fee219c5da201622c164e8b762dff 818 PANTHER PTHR10947:SF0 2 295 1.0E-206 T 25-04-2016 RJP_RS03080 d96fee219c5da201622c164e8b762dff 818 PANTHER PTHR10947:SF0 325 817 1.0E-206 T 25-04-2016 RJP_RS03080 d96fee219c5da201622c164e8b762dff 818 PANTHER PTHR10947 2 295 1.0E-206 T 25-04-2016 RJP_RS03080 d96fee219c5da201622c164e8b762dff 818 PANTHER PTHR10947 325 817 1.0E-206 T 25-04-2016 RJP_RS03080 d96fee219c5da201622c164e8b762dff 818 Pfam PF03484 tRNA synthetase B5 domain 428 493 2.5E-17 T 25-04-2016 IPR005147 tRNA synthetase, B5-domain GO:0000287|GO:0003723|GO:0005524|GO:0006432 KEGG: 00970+6.1.1.20 RJP_RS03080 d96fee219c5da201622c164e8b762dff 818 SMART SM00874 425 493 6.6E-23 T 25-04-2016 IPR005147 tRNA synthetase, B5-domain GO:0000287|GO:0003723|GO:0005524|GO:0006432 KEGG: 00970+6.1.1.20 RJP_RS03080 d96fee219c5da201622c164e8b762dff 818 Hamap MF_00283 Phenylalanine--tRNA ligase beta subunit [pheT]. 1 811 42.351 T 25-04-2016 IPR004532 Phenylalanine-tRNA ligase, class IIc, beta subunit GO:0000287|GO:0004826|GO:0005524|GO:0005737|GO:0006432 KEGG: 00970+6.1.1.20 RJP_RS03080 d96fee219c5da201622c164e8b762dff 818 TIGRFAM TIGR00472 pheT_bact: phenylalanine--tRNA ligase, beta subunit 1 817 1.6E-221 T 25-04-2016 IPR004532 Phenylalanine-tRNA ligase, class IIc, beta subunit GO:0000287|GO:0004826|GO:0005524|GO:0005737|GO:0006432 KEGG: 00970+6.1.1.20 RJP_RS03080 d96fee219c5da201622c164e8b762dff 818 SUPERFAMILY SSF50249 40 193 1.92E-36 T 25-04-2016 IPR012340 Nucleic acid-binding, OB-fold RJP_RS00595 b0b58e9611c297d4b061234b36347acf 273 Pfam PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term 14 121 1.3E-41 T 25-04-2016 IPR029139 NADPH-dependent 7-cyano-7-deazaguanine reductase, N-terminal KEGG: 00790+1.7.1.13|MetaCyc: PWY-6700|UniPathway: UPA00392 RJP_RS00595 b0b58e9611c297d4b061234b36347acf 273 PANTHER PTHR34354 1 272 2.1E-67 T 25-04-2016 RJP_RS00595 b0b58e9611c297d4b061234b36347acf 273 TIGRFAM TIGR03138 QueF: queuine synthase 4 273 3.8E-108 T 25-04-2016 IPR016428 NADPH-dependent 7-cyano-7-deazaguanine reductase, QueF type 2 GO:0005737|GO:0008616|GO:0046857|GO:0055114 KEGG: 00790+1.7.1.13|MetaCyc: PWY-6700|UniPathway: UPA00392 RJP_RS00595 b0b58e9611c297d4b061234b36347acf 273 Gene3D G3DSA:3.30.1130.10 14 127 3.9E-36 T 25-04-2016 RJP_RS00595 b0b58e9611c297d4b061234b36347acf 273 SUPERFAMILY SSF55620 175 255 5.78E-7 T 25-04-2016 RJP_RS00595 b0b58e9611c297d4b061234b36347acf 273 PIRSF PIRSF004750 1 273 5.7E-112 T 25-04-2016 IPR016428 NADPH-dependent 7-cyano-7-deazaguanine reductase, QueF type 2 GO:0005737|GO:0008616|GO:0046857|GO:0055114 KEGG: 00790+1.7.1.13|MetaCyc: PWY-6700|UniPathway: UPA00392 RJP_RS00595 b0b58e9611c297d4b061234b36347acf 273 Pfam PF14489 QueF-like protein 185 261 9.3E-22 T 25-04-2016 IPR029500 NADPH-dependent 7-cyano-7-deazaguanine reductase QueF GO:0008616|GO:0033739 KEGG: 00790+1.7.1.13|MetaCyc: PWY-6700|UniPathway: UPA00392 RJP_RS00595 b0b58e9611c297d4b061234b36347acf 273 PANTHER PTHR34354:SF1 1 272 2.1E-67 T 25-04-2016 RJP_RS00595 b0b58e9611c297d4b061234b36347acf 273 Gene3D G3DSA:3.30.1130.10 137 262 2.0E-42 T 25-04-2016 RJP_RS00595 b0b58e9611c297d4b061234b36347acf 273 Hamap MF_00817 NADPH-dependent 7-cyano-7-deazaguanine reductase [queF]. 1 273 122.942 T 25-04-2016 IPR016428 NADPH-dependent 7-cyano-7-deazaguanine reductase, QueF type 2 GO:0005737|GO:0008616|GO:0046857|GO:0055114 KEGG: 00790+1.7.1.13|MetaCyc: PWY-6700|UniPathway: UPA00392 RJP_RS05940 7febdb0c88a899e0cd59f62f3ab23fc4 199 Gene3D G3DSA:1.10.3760.10 148 186 8.3E-4 T 25-04-2016 IPR027416 YutG-like domain RJP_RS05940 7febdb0c88a899e0cd59f62f3ab23fc4 199 PANTHER PTHR36305 131 196 1.6E-26 T 25-04-2016 RJP_RS05940 7febdb0c88a899e0cd59f62f3ab23fc4 199 PANTHER PTHR36305 70 114 1.6E-26 T 25-04-2016 RJP_RS05940 7febdb0c88a899e0cd59f62f3ab23fc4 199 PANTHER PTHR36305 7 47 1.6E-26 T 25-04-2016 RJP_RS05940 7febdb0c88a899e0cd59f62f3ab23fc4 199 PIRSF PIRSF006162 1 198 1.7E-57 T 25-04-2016 IPR026037 Phosphatidylglycerophosphatase A KEGG: 00564+3.1.3.27|MetaCyc: PWY-5269|MetaCyc: PWY-5668|UniPathway: UPA00084 RJP_RS05940 7febdb0c88a899e0cd59f62f3ab23fc4 199 SUPERFAMILY SSF101307 138 189 2.22E-35 T 25-04-2016 IPR007686 YutG/PgpA domain GO:0006629|GO:0008962 RJP_RS05940 7febdb0c88a899e0cd59f62f3ab23fc4 199 SUPERFAMILY SSF101307 3 110 2.22E-35 T 25-04-2016 IPR007686 YutG/PgpA domain GO:0006629|GO:0008962 RJP_RS05940 7febdb0c88a899e0cd59f62f3ab23fc4 199 Pfam PF04608 Phosphatidylglycerophosphatase A 9 190 5.2E-43 T 25-04-2016 IPR007686 YutG/PgpA domain GO:0006629|GO:0008962 RJP_RS06135 d1e731eef7064eae9f8d1ca03f3a70c8 157 Pfam PF04355 SmpA / OmlA family 29 99 6.1E-9 T 25-04-2016 IPR007450 Lipoprotein SmpA/OmlA GO:0019867 RJP_RS05630 1f85f33438a36b9995947ed3203f555f 201 SUPERFAMILY SSF81301 3 138 7.36E-38 T 25-04-2016 RJP_RS05630 1f85f33438a36b9995947ed3203f555f 201 PANTHER PTHR21262 5 140 9.6E-32 T 25-04-2016 RJP_RS05630 1f85f33438a36b9995947ed3203f555f 201 Gene3D G3DSA:3.30.460.10 4 114 4.2E-32 T 25-04-2016 RJP_RS05630 1f85f33438a36b9995947ed3203f555f 201 Pfam PF04607 Region found in RelA / SpoT proteins 25 135 8.0E-28 T 25-04-2016 IPR007685 RelA/SpoT GO:0015969 RJP_RS05630 1f85f33438a36b9995947ed3203f555f 201 SMART SM00954 24 135 2.6E-39 T 25-04-2016 IPR007685 RelA/SpoT GO:0015969 RJP_RS01135 79f2c153f6182c2f42682b17e123bdb0 146 PANTHER PTHR12901 1 144 2.0E-43 T 25-04-2016 RJP_RS01135 79f2c153f6182c2f42682b17e123bdb0 146 Gene3D G3DSA:3.30.530.20 3 145 8.2E-43 T 25-04-2016 IPR023393 START-like domain RJP_RS01135 79f2c153f6182c2f42682b17e123bdb0 146 Pfam PF03364 Polyketide cyclase / dehydrase and lipid transport 10 138 2.4E-25 T 25-04-2016 IPR005031 Coenzyme Q-binding protein COQ10, START domain RJP_RS01135 79f2c153f6182c2f42682b17e123bdb0 146 PANTHER PTHR12901:SF7 1 144 2.0E-43 T 25-04-2016 RJP_RS01135 79f2c153f6182c2f42682b17e123bdb0 146 SUPERFAMILY SSF55961 1 144 1.74E-28 T 25-04-2016 RJP_RS01950 f939a99fb23231e2e166bb0b01dfecea 95 PANTHER PTHR30547:SF0 2 91 2.4E-34 T 25-04-2016 RJP_RS01950 f939a99fb23231e2e166bb0b01dfecea 95 PANTHER PTHR30547 2 91 2.4E-34 T 25-04-2016 RJP_RS01950 f939a99fb23231e2e166bb0b01dfecea 95 Pfam PF06250 Protein of unknown function (DUF1016) 2 81 9.1E-26 T 25-04-2016 IPR009362 Protein of unknown function DUF1016 RJP_RS05970 880a3ded0971c506182359eb3b897852 79 SUPERFAMILY SSF56281 7 78 2.61E-5 T 25-04-2016 IPR001279 Metallo-beta-lactamase RJP_RS05970 880a3ded0971c506182359eb3b897852 79 Gene3D G3DSA:3.60.15.10 2 77 5.5E-12 T 25-04-2016 IPR001279 Metallo-beta-lactamase RJP_RS05970 880a3ded0971c506182359eb3b897852 79 PANTHER PTHR15032 10 77 1.2E-15 T 25-04-2016 RJP_RS05970 880a3ded0971c506182359eb3b897852 79 Pfam PF12706 Beta-lactamase superfamily domain 2 69 8.7E-8 T 25-04-2016 IPR001279 Metallo-beta-lactamase RJP_RS02850 01faedb0560a698bc7d17c9ddd3ab58e 342 Gene3D G3DSA:3.40.50.300 18 172 7.1E-34 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RJP_RS02850 01faedb0560a698bc7d17c9ddd3ab58e 342 TIGRFAM TIGR00635 ruvB: Holliday junction DNA helicase RuvB 23 325 1.8E-136 T 25-04-2016 IPR004605 DNA helicase, Holliday junction RuvB type GO:0003677|GO:0005524|GO:0006281|GO:0006310|GO:0009378 RJP_RS02850 01faedb0560a698bc7d17c9ddd3ab58e 342 Hamap MF_00016 Holliday junction ATP-dependent DNA helicase RuvB [ruvB]. 1 342 153.573 T 25-04-2016 IPR004605 DNA helicase, Holliday junction RuvB type GO:0003677|GO:0005524|GO:0006281|GO:0006310|GO:0009378 RJP_RS02850 01faedb0560a698bc7d17c9ddd3ab58e 342 SUPERFAMILY SSF52540 18 246 4.48E-55 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RJP_RS02850 01faedb0560a698bc7d17c9ddd3ab58e 342 Pfam PF05496 Holliday junction DNA helicase ruvB N-terminus 8 233 1.9E-110 T 25-04-2016 IPR008824 Holliday junction DNA helicase ruvB, N-terminal GO:0006281|GO:0006310|GO:0009378 RJP_RS02850 01faedb0560a698bc7d17c9ddd3ab58e 342 SUPERFAMILY SSF46785 254 328 1.36E-23 T 25-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RJP_RS02850 01faedb0560a698bc7d17c9ddd3ab58e 342 PANTHER PTHR13779 8 330 3.1E-156 T 25-04-2016 RJP_RS02850 01faedb0560a698bc7d17c9ddd3ab58e 342 SMART SM00382 49 180 6.5E-13 T 25-04-2016 IPR003593 AAA+ ATPase domain RJP_RS02850 01faedb0560a698bc7d17c9ddd3ab58e 342 ProDom PD005323 DNA HELICASE HOLLIDAY JUNCTION RUVB NUCLEOTIDE-BINDING ATP-BINDING SOS RECOMBINATION RESPONSE 249 323 3.0E-36 T 25-04-2016 IPR008823 DNA helicase, Holliday junction RuvB type, C-terminal GO:0003677|GO:0006281|GO:0006310|GO:0009378 RJP_RS02850 01faedb0560a698bc7d17c9ddd3ab58e 342 Gene3D G3DSA:1.10.10.10 255 326 2.4E-31 T 25-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RJP_RS02850 01faedb0560a698bc7d17c9ddd3ab58e 342 Pfam PF05491 Holliday junction DNA helicase ruvB C-terminus 251 324 4.5E-31 T 25-04-2016 IPR008823 DNA helicase, Holliday junction RuvB type, C-terminal GO:0003677|GO:0006281|GO:0006310|GO:0009378 RJP_RS02850 01faedb0560a698bc7d17c9ddd3ab58e 342 Gene3D G3DSA:1.10.8.60 181 253 3.8E-27 T 25-04-2016 RJP_RS02850 01faedb0560a698bc7d17c9ddd3ab58e 342 PANTHER PTHR13779:SF25 8 330 3.1E-156 T 25-04-2016 RJP_RS04800 2f4c3a977d245cdc84a2dde31bfe9311 66 Pfam PF01165 Ribosomal protein S21 4 56 6.8E-16 T 25-04-2016 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 RJP_RS04800 2f4c3a977d245cdc84a2dde31bfe9311 66 TIGRFAM TIGR00030 S21p: ribosomal protein bS21 3 58 7.8E-22 T 25-04-2016 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 RJP_RS04800 2f4c3a977d245cdc84a2dde31bfe9311 66 Hamap MF_00358 30S ribosomal protein S21 [rpsU]. 1 56 14.861 T 25-04-2016 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 RJP_RS04800 2f4c3a977d245cdc84a2dde31bfe9311 66 ProDom PD005521 RIBOSOMAL S21 RIBONUCLEOPROTEIN 30S S21P A SSU SUBUNIT SEQUENCING DIRECT 15 41 1.0E-8 T 25-04-2016 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 RJP_RS01540 8de8a13f0790ecef5c006a622e4d4527 589 ProSitePatterns PS00211 ABC transporters family signature. 485 499 - T 25-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 RJP_RS01540 8de8a13f0790ecef5c006a622e4d4527 589 Pfam PF00664 ABC transporter transmembrane region 27 295 4.5E-13 T 25-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 RJP_RS01540 8de8a13f0790ecef5c006a622e4d4527 589 Gene3D G3DSA:3.40.50.300 346 578 1.0E-75 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RJP_RS01540 8de8a13f0790ecef5c006a622e4d4527 589 SMART SM00382 373 559 5.2E-14 T 25-04-2016 IPR003593 AAA+ ATPase domain RJP_RS01540 8de8a13f0790ecef5c006a622e4d4527 589 Gene3D G3DSA:1.20.1560.10 18 325 1.7E-25 T 25-04-2016 RJP_RS01540 8de8a13f0790ecef5c006a622e4d4527 589 SUPERFAMILY SSF90123 18 313 8.24E-35 T 25-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 RJP_RS01540 8de8a13f0790ecef5c006a622e4d4527 589 SUPERFAMILY SSF52540 339 583 4.07E-88 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RJP_RS01540 8de8a13f0790ecef5c006a622e4d4527 589 Pfam PF00005 ABC transporter 368 513 1.1E-31 T 25-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 RJP_RS01540 8de8a13f0790ecef5c006a622e4d4527 589 PANTHER PTHR24221 16 583 1.9E-154 T 25-04-2016 RJP_RS06255 e1f9c7bb0c6f125cf86a81dd73078658 657 PANTHER PTHR22773 1 554 2.6E-230 T 25-04-2016 RJP_RS06255 e1f9c7bb0c6f125cf86a81dd73078658 657 PANTHER PTHR22773 570 604 2.6E-230 T 25-04-2016 RJP_RS06255 e1f9c7bb0c6f125cf86a81dd73078658 657 TIGRFAM TIGR01974 NDH_I_L: proton-translocating NADH-quinone oxidoreductase, chain L 6 650 5.2E-245 T 25-04-2016 IPR003945 NADH-plastoquinone oxidoreductase, chain 5 GO:0008137|GO:0042773|GO:0055114 RJP_RS06255 e1f9c7bb0c6f125cf86a81dd73078658 657 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 84 109 1.7E-61 T 25-04-2016 RJP_RS06255 e1f9c7bb0c6f125cf86a81dd73078658 657 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 253 279 1.7E-61 T 25-04-2016 RJP_RS06255 e1f9c7bb0c6f125cf86a81dd73078658 657 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 159 180 1.7E-61 T 25-04-2016 RJP_RS06255 e1f9c7bb0c6f125cf86a81dd73078658 657 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 421 440 1.7E-61 T 25-04-2016 RJP_RS06255 e1f9c7bb0c6f125cf86a81dd73078658 657 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 112 132 1.7E-61 T 25-04-2016 RJP_RS06255 e1f9c7bb0c6f125cf86a81dd73078658 657 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 231 252 1.7E-61 T 25-04-2016 RJP_RS06255 e1f9c7bb0c6f125cf86a81dd73078658 657 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 321 333 1.7E-61 T 25-04-2016 RJP_RS06255 e1f9c7bb0c6f125cf86a81dd73078658 657 Pfam PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus 67 123 4.3E-21 T 25-04-2016 IPR001516 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminal RJP_RS06255 e1f9c7bb0c6f125cf86a81dd73078658 657 PANTHER PTHR22773:SF50 1 554 2.6E-230 T 25-04-2016 RJP_RS06255 e1f9c7bb0c6f125cf86a81dd73078658 657 PANTHER PTHR22773:SF50 570 604 2.6E-230 T 25-04-2016 RJP_RS06255 e1f9c7bb0c6f125cf86a81dd73078658 657 PRINTS PR01435 NADH-plastoquinone oxidoreductase chain 5 signature 420 442 5.8E-14 T 25-04-2016 IPR018393 NADH-plastoquinone oxidoreductase, chain 5 subgroup GO:0008137|GO:0042773|GO:0055114 RJP_RS06255 e1f9c7bb0c6f125cf86a81dd73078658 657 PRINTS PR01435 NADH-plastoquinone oxidoreductase chain 5 signature 86 106 5.8E-14 T 25-04-2016 IPR018393 NADH-plastoquinone oxidoreductase, chain 5 subgroup GO:0008137|GO:0042773|GO:0055114 RJP_RS06255 e1f9c7bb0c6f125cf86a81dd73078658 657 PRINTS PR01435 NADH-plastoquinone oxidoreductase chain 5 signature 504 525 5.8E-14 T 25-04-2016 IPR018393 NADH-plastoquinone oxidoreductase, chain 5 subgroup GO:0008137|GO:0042773|GO:0055114 RJP_RS06255 e1f9c7bb0c6f125cf86a81dd73078658 657 PRINTS PR01435 NADH-plastoquinone oxidoreductase chain 5 signature 271 293 5.8E-14 T 25-04-2016 IPR018393 NADH-plastoquinone oxidoreductase, chain 5 subgroup GO:0008137|GO:0042773|GO:0055114 RJP_RS06255 e1f9c7bb0c6f125cf86a81dd73078658 657 Pfam PF00361 Proton-conducting membrane transporter 135 427 4.2E-81 T 25-04-2016 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit Reactome: REACT_6305 RJP_RS06520 fcc0832e306265a1849f6fd2732453e3 327 PANTHER PTHR22926:SF3 10 320 4.5E-48 T 25-04-2016 RJP_RS06520 fcc0832e306265a1849f6fd2732453e3 327 PANTHER PTHR22926 10 320 4.5E-48 T 25-04-2016 IPR000715 Glycosyl transferase, family 4 GO:0008963|GO:0016021 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 RJP_RS06520 fcc0832e306265a1849f6fd2732453e3 327 Pfam PF00953 Glycosyl transferase family 4 82 226 1.4E-24 T 25-04-2016 IPR000715 Glycosyl transferase, family 4 GO:0008963|GO:0016021 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 RJP_RS00220 d85c9b91fc01c59a719fc4d9338fd64c 81 Gene3D G3DSA:1.20.910.10 28 73 4.2E-10 T 25-04-2016 IPR016084 Haem oxygenase-like, multi-helical Reactome: REACT_9431 RJP_RS00220 d85c9b91fc01c59a719fc4d9338fd64c 81 SUPERFAMILY SSF48613 9 66 1.78E-8 T 25-04-2016 IPR016084 Haem oxygenase-like, multi-helical Reactome: REACT_9431 RJP_RS04415 590c337f90b0022f7bfd70cf3b6e418b 149 Pfam PF02381 MraZ protein, putative antitoxin-like 79 146 3.4E-17 T 25-04-2016 IPR020603 MraZ domain RJP_RS04415 590c337f90b0022f7bfd70cf3b6e418b 149 PANTHER PTHR34701 4 136 3.2E-25 T 25-04-2016 RJP_RS04415 590c337f90b0022f7bfd70cf3b6e418b 149 SUPERFAMILY SSF89447 1 139 3.56E-36 T 25-04-2016 RJP_RS04415 590c337f90b0022f7bfd70cf3b6e418b 149 ProDom PD006745 MRAZ YABB DIVISION CELL 3D-STRUCTURE UNCHARACTERIZED BCR SIMILAR PROTEIN 3 133 1.0E-12 T 25-04-2016 IPR003444 Transcriptional regulator MraZ GO:0003700|GO:0006355 RJP_RS04415 590c337f90b0022f7bfd70cf3b6e418b 149 Hamap MF_01008 Transcriptional regulator MraZ [mraZ]. 1 149 33.671 T 25-04-2016 IPR003444 Transcriptional regulator MraZ GO:0003700|GO:0006355 RJP_RS04240 0fd51ce3c85187699eac0519db33e363 161 PANTHER PTHR33867:SF1 1 150 1.6E-34 T 25-04-2016 RJP_RS04240 0fd51ce3c85187699eac0519db33e363 161 Pfam PF02576 Putative ribosome maturation factor RimP 12 148 4.8E-37 T 25-04-2016 IPR003728 Ribosome maturation factor RimP GO:0042274 RJP_RS04240 0fd51ce3c85187699eac0519db33e363 161 PANTHER PTHR33867 1 150 1.6E-34 T 25-04-2016 RJP_RS04240 0fd51ce3c85187699eac0519db33e363 161 Gene3D G3DSA:3.30.300.70 1 80 2.1E-21 T 25-04-2016 IPR028989 Ribosome maturation factor RimP, N-terminal RJP_RS04240 0fd51ce3c85187699eac0519db33e363 161 SUPERFAMILY SSF74942 85 152 9.15E-15 T 25-04-2016 IPR028998 Ribosome maturation factor RimP, C-terminal RJP_RS04240 0fd51ce3c85187699eac0519db33e363 161 Hamap MF_01077 Ribosome maturation factor RimP [rimP]. 6 152 20.541 T 25-04-2016 IPR003728 Ribosome maturation factor RimP GO:0042274 RJP_RS04240 0fd51ce3c85187699eac0519db33e363 161 SUPERFAMILY SSF75420 2 84 1.7E-17 T 25-04-2016 IPR028989 Ribosome maturation factor RimP, N-terminal RJP_RS04240 0fd51ce3c85187699eac0519db33e363 161 Gene3D G3DSA:2.30.30.180 89 149 1.8E-11 T 25-04-2016 IPR028998 Ribosome maturation factor RimP, C-terminal RJP_RS05010 690056d1cd84a8fe95ffd2b2f3aaacc7 232 Pfam PF01144 Coenzyme A transferase 7 215 2.8E-74 T 25-04-2016 IPR004165 Coenzyme A transferase family I GO:0008152|GO:0008410 RJP_RS05010 690056d1cd84a8fe95ffd2b2f3aaacc7 232 SMART SM00882 5 217 1.3E-82 T 25-04-2016 IPR004165 Coenzyme A transferase family I GO:0008152|GO:0008410 RJP_RS05010 690056d1cd84a8fe95ffd2b2f3aaacc7 232 PANTHER PTHR13707 1 231 7.1E-130 T 25-04-2016 IPR004165 Coenzyme A transferase family I GO:0008152|GO:0008410 RJP_RS05010 690056d1cd84a8fe95ffd2b2f3aaacc7 232 Gene3D G3DSA:3.40.1080.10 2 216 6.6E-95 T 25-04-2016 RJP_RS05010 690056d1cd84a8fe95ffd2b2f3aaacc7 232 TIGRFAM TIGR02429 pcaI_scoA_fam: 3-oxoacid CoA-transferase, A subunit 1 215 4.3E-77 T 25-04-2016 IPR012792 3-oxoacid CoA-transferase, subunit A GO:0008410 RJP_RS05010 690056d1cd84a8fe95ffd2b2f3aaacc7 232 SUPERFAMILY SSF100950 2 227 8.97E-85 T 25-04-2016 RJP_RS03275 1bb69955065d76393826a6ce76ca9394 475 Gene3D G3DSA:3.40.605.10 10 263 1.1E-84 T 25-04-2016 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 RJP_RS03275 1bb69955065d76393826a6ce76ca9394 475 PANTHER PTHR11699:SF49 10 475 1.3E-232 T 25-04-2016 RJP_RS03275 1bb69955065d76393826a6ce76ca9394 475 PANTHER PTHR11699 10 475 1.3E-232 T 25-04-2016 RJP_RS03275 1bb69955065d76393826a6ce76ca9394 475 Gene3D G3DSA:3.40.309.10 264 445 8.9E-67 T 25-04-2016 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0008152|GO:0016491|GO:0016620|GO:0055114 RJP_RS03275 1bb69955065d76393826a6ce76ca9394 475 Pfam PF00171 Aldehyde dehydrogenase family 22 470 4.8E-154 T 25-04-2016 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 RJP_RS03275 1bb69955065d76393826a6ce76ca9394 475 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 250 257 - T 25-04-2016 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0008152|GO:0016491|GO:0055114 RJP_RS03275 1bb69955065d76393826a6ce76ca9394 475 SUPERFAMILY SSF53720 6 474 3.8E-151 T 25-04-2016 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 RJP_RS04805 ac22b311b225fee199c478343c370b96 599 SUPERFAMILY SSF47384 345 442 6.67E-11 T 25-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RJP_RS04805 ac22b311b225fee199c478343c370b96 599 Gene3D G3DSA:3.30.565.10 427 587 3.2E-27 T 25-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RJP_RS04805 ac22b311b225fee199c478343c370b96 599 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 482 588 3.8E-16 T 25-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RJP_RS04805 ac22b311b225fee199c478343c370b96 599 SMART SM00388 371 441 4.6E-11 T 25-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RJP_RS04805 ac22b311b225fee199c478343c370b96 599 SMART SM00304 307 361 2.4E-13 T 25-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 RJP_RS04805 ac22b311b225fee199c478343c370b96 599 Pfam PF00512 His Kinase A (phospho-acceptor) domain 373 439 4.0E-10 T 25-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RJP_RS04805 ac22b311b225fee199c478343c370b96 599 Gene3D G3DSA:1.10.287.130 368 426 1.1E-8 T 25-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RJP_RS04805 ac22b311b225fee199c478343c370b96 599 Pfam PF00672 HAMP domain 288 357 5.0E-14 T 25-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 RJP_RS04805 ac22b311b225fee199c478343c370b96 599 PANTHER PTHR24423 301 584 7.8E-49 T 25-04-2016 RJP_RS04805 ac22b311b225fee199c478343c370b96 599 PANTHER PTHR24423 1 12 7.8E-49 T 25-04-2016 RJP_RS04805 ac22b311b225fee199c478343c370b96 599 PRINTS PR00344 Bacterial sensor protein C-terminal signature 520 534 8.6E-8 T 25-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 RJP_RS04805 ac22b311b225fee199c478343c370b96 599 PRINTS PR00344 Bacterial sensor protein C-terminal signature 549 567 8.6E-8 T 25-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 RJP_RS04805 ac22b311b225fee199c478343c370b96 599 SMART SM00387 481 589 5.7E-25 T 25-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RJP_RS04805 ac22b311b225fee199c478343c370b96 599 SUPERFAMILY SSF158472 309 358 5.1E-9 T 25-04-2016 RJP_RS04805 ac22b311b225fee199c478343c370b96 599 SUPERFAMILY SSF55874 466 585 6.16E-26 T 25-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RJP_RS04805 ac22b311b225fee199c478343c370b96 599 PANTHER PTHR24423:SF520 301 584 7.8E-49 T 25-04-2016 RJP_RS04805 ac22b311b225fee199c478343c370b96 599 PANTHER PTHR24423:SF520 1 12 7.8E-49 T 25-04-2016 RJP_RS05320 40618656d8abe87dcd9b020069f5cb67 301 Pfam PF00398 Ribosomal RNA adenine dimethylase 18 301 2.0E-56 T 25-04-2016 IPR001737 Ribosomal RNA adenine methyltransferase KsgA/Erm RJP_RS05320 40618656d8abe87dcd9b020069f5cb67 301 Hamap MF_00607 Ribosomal RNA small subunit methyltransferase A [rsmA]. 14 301 50.491 T 25-04-2016 IPR011530 Ribosomal RNA adenine dimethylase GO:0000179|GO:0006364 RJP_RS05320 40618656d8abe87dcd9b020069f5cb67 301 Gene3D G3DSA:1.10.8.100 243 301 1.1E-14 T 25-04-2016 IPR023165 rRNA adenine dimethylase-like RJP_RS05320 40618656d8abe87dcd9b020069f5cb67 301 SMART SM00650 30 234 5.1E-73 T 25-04-2016 IPR020598 Ribosomal RNA adenine methylase transferase, N-terminal GO:0000154|GO:0000179|GO:0008649 RJP_RS05320 40618656d8abe87dcd9b020069f5cb67 301 SUPERFAMILY SSF53335 141 300 7.03E-74 T 25-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RJP_RS05320 40618656d8abe87dcd9b020069f5cb67 301 SUPERFAMILY SSF53335 15 112 7.03E-74 T 25-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RJP_RS05320 40618656d8abe87dcd9b020069f5cb67 301 Gene3D G3DSA:3.40.50.150 3 102 1.9E-64 T 25-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RJP_RS05320 40618656d8abe87dcd9b020069f5cb67 301 Gene3D G3DSA:3.40.50.150 137 235 1.9E-64 T 25-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RJP_RS05320 40618656d8abe87dcd9b020069f5cb67 301 TIGRFAM TIGR00755 ksgA: ribosomal RNA small subunit methyltransferase A 15 300 3.7E-81 T 25-04-2016 IPR011530 Ribosomal RNA adenine dimethylase GO:0000179|GO:0006364 RJP_RS05320 40618656d8abe87dcd9b020069f5cb67 301 PANTHER PTHR11727 140 301 3.1E-88 T 25-04-2016 IPR001737 Ribosomal RNA adenine methyltransferase KsgA/Erm RJP_RS05320 40618656d8abe87dcd9b020069f5cb67 301 PANTHER PTHR11727 2 119 3.1E-88 T 25-04-2016 IPR001737 Ribosomal RNA adenine methyltransferase KsgA/Erm RJP_RS05320 40618656d8abe87dcd9b020069f5cb67 301 ProSitePatterns PS01131 Ribosomal RNA adenine dimethylases signature. 46 74 - T 25-04-2016 IPR020596 Ribosomal RNA adenine methylase transferase, conserved site GO:0000154|GO:0000179|GO:0008649 RJP_RS05320 40618656d8abe87dcd9b020069f5cb67 301 TIGRFAM TIGR03774 RPE2: rickettsial palindromic element RPE2 domain 111 142 7.6E-15 T 25-04-2016 IPR022436 Rickettsia palindromic element RPE2 RJP_RS03130 378de7edc4161dc5fa3a7c3c56907cc5 226 Gene3D G3DSA:3.40.50.2300 3 129 4.1E-40 T 25-04-2016 RJP_RS03130 378de7edc4161dc5fa3a7c3c56907cc5 226 SMART SM00448 6 117 9.4E-41 T 25-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 RJP_RS03130 378de7edc4161dc5fa3a7c3c56907cc5 226 Pfam PF00072 Response regulator receiver domain 8 117 5.8E-31 T 25-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 RJP_RS03130 378de7edc4161dc5fa3a7c3c56907cc5 226 Gene3D G3DSA:1.10.10.10 130 224 7.8E-20 T 25-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RJP_RS03130 378de7edc4161dc5fa3a7c3c56907cc5 226 SUPERFAMILY SSF46894 128 225 7.09E-19 T 25-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 RJP_RS03130 378de7edc4161dc5fa3a7c3c56907cc5 226 SMART SM00862 152 224 4.7E-15 T 25-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 RJP_RS03130 378de7edc4161dc5fa3a7c3c56907cc5 226 SUPERFAMILY SSF52172 4 131 5.27E-39 T 25-04-2016 IPR011006 CheY-like superfamily RJP_RS03130 378de7edc4161dc5fa3a7c3c56907cc5 226 PANTHER PTHR26402 6 224 3.7E-69 T 25-04-2016 RJP_RS03130 378de7edc4161dc5fa3a7c3c56907cc5 226 Pfam PF00486 Transcriptional regulatory protein, C terminal 155 224 2.7E-15 T 25-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 RJP_RS03130 378de7edc4161dc5fa3a7c3c56907cc5 226 PANTHER PTHR26402:SF292 6 224 3.7E-69 T 25-04-2016 RJP_RS03110 c8c55c3b6954b0dc3ad2d66740fb3167 101 Pfam PF04977 Septum formation initiator 21 99 1.4E-19 T 25-04-2016 IPR007060 Septum formation initiator FtsL/DivIC GO:0007049 RJP_RS04835 0d9f886bcbed8e51f6a79bd08866c2f9 319 SUPERFAMILY SSF144083 254 317 8.76E-21 T 25-04-2016 RJP_RS04835 0d9f886bcbed8e51f6a79bd08866c2f9 319 PANTHER PTHR21535:SF37 20 318 1.2E-73 T 25-04-2016 RJP_RS04835 0d9f886bcbed8e51f6a79bd08866c2f9 319 Pfam PF01544 CorA-like Mg2+ transporter protein 22 315 2.2E-48 T 25-04-2016 IPR002523 Mg2+ transporter protein, CorA-like/Zinc transport protein ZntB GO:0016020|GO:0030001|GO:0046873|GO:0055085 RJP_RS04835 0d9f886bcbed8e51f6a79bd08866c2f9 319 Gene3D G3DSA:1.20.58.340 243 319 3.0E-27 T 25-04-2016 RJP_RS04835 0d9f886bcbed8e51f6a79bd08866c2f9 319 SUPERFAMILY SSF143865 2 257 2.22E-29 T 25-04-2016 RJP_RS04835 0d9f886bcbed8e51f6a79bd08866c2f9 319 PANTHER PTHR21535 20 318 1.2E-73 T 25-04-2016 RJP_RS00725 56d5834bbc5ede8535bbe880c8ffc60e 259 PANTHER PTHR30188 1 259 4.5E-95 T 25-04-2016 IPR030802 ABC transporter permease MalE GO:0006810|GO:0043190 RJP_RS00725 56d5834bbc5ede8535bbe880c8ffc60e 259 Pfam PF02405 Permease MlaE 44 254 2.1E-78 T 25-04-2016 IPR030802 ABC transporter permease MalE GO:0006810|GO:0043190 RJP_RS00725 56d5834bbc5ede8535bbe880c8ffc60e 259 PANTHER PTHR30188:SF4 1 259 4.5E-95 T 25-04-2016 RJP_RS00725 56d5834bbc5ede8535bbe880c8ffc60e 259 TIGRFAM TIGR00056 TIGR00056: ABC transport permease subunit 6 258 2.6E-75 T 25-04-2016 IPR003453 ABC transport permease subunit MlaE, Proteobacteria RJP_RS05170 cd3485f265649a25d5157ae5e088462f 179 PANTHER PTHR11994 1 177 5.8E-90 T 25-04-2016 RJP_RS05170 cd3485f265649a25d5157ae5e088462f 179 Hamap MF_01333_B 50S ribosomal protein L5 [rplE]. 1 179 42.856 T 25-04-2016 IPR020930 Ribosomal protein L5, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 RJP_RS05170 cd3485f265649a25d5157ae5e088462f 179 SUPERFAMILY SSF55282 3 179 4.47E-77 T 25-04-2016 IPR022803 Ribosomal protein L5 domain RJP_RS05170 cd3485f265649a25d5157ae5e088462f 179 Pfam PF00673 ribosomal L5P family C-terminus 84 177 1.2E-40 T 25-04-2016 IPR031309 Ribosomal protein L5, C-terminal RJP_RS05170 cd3485f265649a25d5157ae5e088462f 179 Pfam PF00281 Ribosomal protein L5 24 80 4.8E-26 T 25-04-2016 IPR031310 Ribosomal protein L5, N-terminal RJP_RS05170 cd3485f265649a25d5157ae5e088462f 179 PIRSF PIRSF002161 1 179 3.0E-66 T 25-04-2016 IPR002132 Ribosomal protein L5 GO:0003735|GO:0005840|GO:0006412 RJP_RS05170 cd3485f265649a25d5157ae5e088462f 179 Gene3D G3DSA:3.30.1440.10 2 178 5.1E-78 T 25-04-2016 IPR022803 Ribosomal protein L5 domain RJP_RS05170 cd3485f265649a25d5157ae5e088462f 179 ProSitePatterns PS00358 Ribosomal protein L5 signature. 57 73 - T 25-04-2016 IPR020929 Ribosomal protein L5, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 RJP_RS01965 aff421a05e17962a02b728823289a185 314 PANTHER PTHR11075:SF6 2 310 6.9E-144 T 25-04-2016 IPR004374 Peptide chain release factor 2 GO:0005737|GO:0006415|GO:0016149 RJP_RS01965 aff421a05e17962a02b728823289a185 314 Pfam PF03462 PCRF domain 2 163 4.6E-46 T 25-04-2016 IPR005139 Peptide chain release factor GO:0005737|GO:0006415|GO:0016149 RJP_RS01965 aff421a05e17962a02b728823289a185 314 TIGRFAM TIGR00020 prfB: peptide chain release factor 2 2 308 1.8E-139 T 25-04-2016 IPR004374 Peptide chain release factor 2 GO:0005737|GO:0006415|GO:0016149 RJP_RS01965 aff421a05e17962a02b728823289a185 314 Gene3D G3DSA:3.30.160.20 172 249 2.3E-37 T 25-04-2016 IPR014720 Double-stranded RNA-binding domain RJP_RS01965 aff421a05e17962a02b728823289a185 314 Pfam PF00472 RF-1 domain 173 282 4.2E-40 T 25-04-2016 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 RJP_RS01965 aff421a05e17962a02b728823289a185 314 PANTHER PTHR11075 2 310 6.9E-144 T 25-04-2016 RJP_RS01965 aff421a05e17962a02b728823289a185 314 Gene3D G3DSA:1.20.58.410 2 58 4.7E-8 T 25-04-2016 RJP_RS01965 aff421a05e17962a02b728823289a185 314 ProSitePatterns PS00745 Prokaryotic-type class I peptide chain release factors signature. 189 205 - T 25-04-2016 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 RJP_RS01965 aff421a05e17962a02b728823289a185 314 SUPERFAMILY SSF75620 2 309 4.58E-119 T 25-04-2016 RJP_RS01965 aff421a05e17962a02b728823289a185 314 SMART SM00937 29 139 6.9E-51 T 25-04-2016 IPR005139 Peptide chain release factor GO:0005737|GO:0006415|GO:0016149 RJP_RS02105 7689499512d8558130301bf36c44544b 243 Pfam PF04335 VirB8 protein 37 241 2.6E-46 T 25-04-2016 IPR007430 Bacterial virulence protein VirB8 GO:0016020 RJP_RS02105 7689499512d8558130301bf36c44544b 243 PIRSF PIRSF003299 21 242 5.2E-40 T 25-04-2016 IPR026264 Type IV secretion system protein VirB8/PtlE GO:0030255 RJP_RS02105 7689499512d8558130301bf36c44544b 243 SUPERFAMILY SSF54427 107 241 8.32E-24 T 25-04-2016 IPR032710 NTF2-like domain RJP_RS06305 7ff4ae100280b911297ffbedbf1dd121 323 Pfam PF00231 ATP synthase 3 322 4.9E-73 T 25-04-2016 IPR000131 ATPase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 RJP_RS06305 7ff4ae100280b911297ffbedbf1dd121 323 SUPERFAMILY SSF52943 3 202 2.49E-75 T 25-04-2016 IPR023633 ATPase, F1 complex, gamma subunit domain RJP_RS06305 7ff4ae100280b911297ffbedbf1dd121 323 SUPERFAMILY SSF52943 240 323 2.49E-75 T 25-04-2016 IPR023633 ATPase, F1 complex, gamma subunit domain RJP_RS06305 7ff4ae100280b911297ffbedbf1dd121 323 Hamap MF_00815 ATP synthase gamma chain [atpG]. 1 323 29.188 T 25-04-2016 IPR000131 ATPase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 RJP_RS06305 7ff4ae100280b911297ffbedbf1dd121 323 PANTHER PTHR11693 1 323 5.9E-89 T 25-04-2016 IPR000131 ATPase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 RJP_RS06305 7ff4ae100280b911297ffbedbf1dd121 323 TIGRFAM TIGR01146 ATPsyn_F1gamma: ATP synthase F1, gamma subunit 1 323 1.7E-80 T 25-04-2016 IPR000131 ATPase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 RJP_RS06305 7ff4ae100280b911297ffbedbf1dd121 323 PRINTS PR00126 ATP synthase gamma subunit signature 170 187 4.5E-27 T 25-04-2016 IPR000131 ATPase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 RJP_RS06305 7ff4ae100280b911297ffbedbf1dd121 323 PRINTS PR00126 ATP synthase gamma subunit signature 301 322 4.5E-27 T 25-04-2016 IPR000131 ATPase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 RJP_RS06305 7ff4ae100280b911297ffbedbf1dd121 323 PRINTS PR00126 ATP synthase gamma subunit signature 77 96 4.5E-27 T 25-04-2016 IPR000131 ATPase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 RJP_RS06305 7ff4ae100280b911297ffbedbf1dd121 323 PRINTS PR00126 ATP synthase gamma subunit signature 270 289 4.5E-27 T 25-04-2016 IPR000131 ATPase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 RJP_RS06305 7ff4ae100280b911297ffbedbf1dd121 323 Gene3D G3DSA:3.40.1380.10 70 195 3.8E-33 T 25-04-2016 RJP_RS06305 7ff4ae100280b911297ffbedbf1dd121 323 TIGRFAM TIGR03774 RPE2: rickettsial palindromic element RPE2 domain 208 242 6.7E-22 T 25-04-2016 IPR022436 Rickettsia palindromic element RPE2 RJP_RS06305 7ff4ae100280b911297ffbedbf1dd121 323 Gene3D G3DSA:1.10.287.80 3 36 1.3E-46 T 25-04-2016 RJP_RS06305 7ff4ae100280b911297ffbedbf1dd121 323 Gene3D G3DSA:1.10.287.80 257 323 1.3E-46 T 25-04-2016 RJP_RS00665 e63344a13d619266168edc8014f38ec4 464 TIGRFAM TIGR01045 RPE1: rickettsial palindromic element RPE1 domain 56 96 1.5E-14 T 25-04-2016 IPR005728 Rickettsial palindromic element RJP_RS00665 e63344a13d619266168edc8014f38ec4 464 Pfam PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) 94 254 1.9E-47 T 25-04-2016 IPR007507 3-deoxy-D-manno-octulosonic-acid transferase, N-terminal KEGG: 00540+2.4.99.12|MetaCyc: PWY-7675|UniPathway: UPA00958 RJP_RS00665 e63344a13d619266168edc8014f38ec4 464 PANTHER PTHR23417:SF2 94 158 7.2E-60 T 25-04-2016 RJP_RS00665 e63344a13d619266168edc8014f38ec4 464 PANTHER PTHR23417:SF2 177 187 7.2E-60 T 25-04-2016 RJP_RS00665 e63344a13d619266168edc8014f38ec4 464 PANTHER PTHR23417:SF2 236 464 7.2E-60 T 25-04-2016 RJP_RS00665 e63344a13d619266168edc8014f38ec4 464 PANTHER PTHR23417 94 158 7.2E-60 T 25-04-2016 RJP_RS00665 e63344a13d619266168edc8014f38ec4 464 PANTHER PTHR23417 177 187 7.2E-60 T 25-04-2016 RJP_RS00665 e63344a13d619266168edc8014f38ec4 464 PANTHER PTHR23417 236 464 7.2E-60 T 25-04-2016 RJP_RS02520 0bd92ced20529a67c1e5386751c678c6 205 Hamap MF_01306_B 30S ribosomal protein S4 [rpsD]. 1 205 30.037 T 25-04-2016 IPR005709 Ribosomal protein S4, bacterial-type GO:0003735|GO:0006412|GO:0015935 RJP_RS02520 0bd92ced20529a67c1e5386751c678c6 205 Gene3D G3DSA:1.10.1050.10 3 96 9.0E-35 T 25-04-2016 IPR001912 Ribosomal protein S4/S9, N-terminal GO:0005622|GO:0019843 RJP_RS02520 0bd92ced20529a67c1e5386751c678c6 205 SMART SM00363 94 158 2.2E-16 T 25-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 RJP_RS02520 0bd92ced20529a67c1e5386751c678c6 205 PANTHER PTHR11831:SF4 1 205 5.4E-70 T 25-04-2016 RJP_RS02520 0bd92ced20529a67c1e5386751c678c6 205 Gene3D G3DSA:3.10.290.10 97 192 1.6E-24 T 25-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 RJP_RS02520 0bd92ced20529a67c1e5386751c678c6 205 SMART SM01390 3 93 5.7E-35 T 25-04-2016 IPR001912 Ribosomal protein S4/S9, N-terminal GO:0005622|GO:0019843 RJP_RS02520 0bd92ced20529a67c1e5386751c678c6 205 Pfam PF00163 Ribosomal protein S4/S9 N-terminal domain 6 93 5.3E-22 T 25-04-2016 IPR001912 Ribosomal protein S4/S9, N-terminal GO:0005622|GO:0019843 RJP_RS02520 0bd92ced20529a67c1e5386751c678c6 205 ProSitePatterns PS00632 Ribosomal protein S4 signature. 92 116 - T 25-04-2016 IPR018079 Ribosomal protein S4, conserved site GO:0005622|GO:0019843 RJP_RS02520 0bd92ced20529a67c1e5386751c678c6 205 SUPERFAMILY SSF55174 4 205 6.41E-56 T 25-04-2016 RJP_RS02520 0bd92ced20529a67c1e5386751c678c6 205 PANTHER PTHR11831 1 205 5.4E-70 T 25-04-2016 IPR022801 Ribosomal protein S4/S9 RJP_RS02520 0bd92ced20529a67c1e5386751c678c6 205 TIGRFAM TIGR01017 rpsD_bact: ribosomal protein uS4 3 205 3.6E-77 T 25-04-2016 IPR005709 Ribosomal protein S4, bacterial-type GO:0003735|GO:0006412|GO:0015935 RJP_RS02520 0bd92ced20529a67c1e5386751c678c6 205 Pfam PF01479 S4 domain 95 141 8.9E-17 T 25-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 RJP_RS01915 44cb7c4120efb9a2eba7366f9e0d6a33 177 TIGRFAM TIGR01409 TAT_signal_seq: Tat (twin-arginine translocation) pathway signal sequence 12 36 4.5E-4 T 25-04-2016 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal RJP_RS01915 44cb7c4120efb9a2eba7366f9e0d6a33 177 Pfam PF10399 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal 5 44 2.1E-18 T 25-04-2016 IPR019470 Ubiquitinol-cytochrome C reductase, Fe-S subunit, TAT signal GO:0008121|GO:0055114 KEGG: 00190+1.10.2.2|MetaCyc: PWY-3781|MetaCyc: PWY-6692|MetaCyc: PWY-7082|MetaCyc: PWY-7279 RJP_RS01915 44cb7c4120efb9a2eba7366f9e0d6a33 177 Pfam PF00355 Rieske [2Fe-2S] domain 60 164 6.5E-13 T 25-04-2016 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 RJP_RS01915 44cb7c4120efb9a2eba7366f9e0d6a33 177 Gene3D G3DSA:1.20.5.510 5 44 3.4E-17 T 25-04-2016 RJP_RS01915 44cb7c4120efb9a2eba7366f9e0d6a33 177 PRINTS PR00162 Rieske 2Fe-2S subunit signature 137 149 3.4E-17 T 25-04-2016 IPR005805 Rieske iron-sulphur protein, C-terminal GO:0016020|GO:0055114 RJP_RS01915 44cb7c4120efb9a2eba7366f9e0d6a33 177 PRINTS PR00162 Rieske 2Fe-2S subunit signature 115 126 3.4E-17 T 25-04-2016 IPR005805 Rieske iron-sulphur protein, C-terminal GO:0016020|GO:0055114 RJP_RS01915 44cb7c4120efb9a2eba7366f9e0d6a33 177 PRINTS PR00162 Rieske 2Fe-2S subunit signature 149 161 3.4E-17 T 25-04-2016 IPR005805 Rieske iron-sulphur protein, C-terminal GO:0016020|GO:0055114 RJP_RS01915 44cb7c4120efb9a2eba7366f9e0d6a33 177 Gene3D G3DSA:2.102.10.10 52 174 2.5E-39 T 25-04-2016 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 RJP_RS01915 44cb7c4120efb9a2eba7366f9e0d6a33 177 PANTHER PTHR10134:SF1 5 177 1.8E-78 T 25-04-2016 RJP_RS01915 44cb7c4120efb9a2eba7366f9e0d6a33 177 PANTHER PTHR10134 5 177 1.8E-78 T 25-04-2016 IPR014349 Rieske iron-sulphur protein GO:0016679|GO:0055114 RJP_RS01915 44cb7c4120efb9a2eba7366f9e0d6a33 177 TIGRFAM TIGR01416 Rieske_proteo: ubiquinol-cytochrome c reductase, iron-sulfur subunit 13 177 2.8E-71 T 25-04-2016 IPR006317 Ubiquinol-cytochrome c reductase, iron-sulphur subunit GO:0008121|GO:0055114 KEGG: 00190+1.10.2.2|MetaCyc: PWY-3781|MetaCyc: PWY-6692|MetaCyc: PWY-7082|MetaCyc: PWY-7279 RJP_RS01915 44cb7c4120efb9a2eba7366f9e0d6a33 177 SUPERFAMILY SSF50022 34 174 7.73E-43 T 25-04-2016 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 RJP_RS05715 b4bbfed864a3a795d881d363b7850f4a 149 PANTHER PTHR33371 1 143 1.6E-32 T 25-04-2016 RJP_RS05715 b4bbfed864a3a795d881d363b7850f4a 149 Pfam PF02470 MlaD protein 37 114 7.2E-25 T 25-04-2016 IPR003399 Mce/MlaD RJP_RS05715 b4bbfed864a3a795d881d363b7850f4a 149 TIGRFAM TIGR04430 OM_asym_MlaD: outer membrane lipid asymmetry maintenance protein MlaD 2 144 1.0E-49 T 25-04-2016 IPR030970 Probable phospholipid ABC transporter-binding protein MlaD GO:0015914 RJP_RS00995 22d67856cdaa72b38c5ebf86806998e0 1372 Hamap MF_01322 DNA-directed RNA polymerase subunit beta' [rpoC]. 14 1372 10.15 T 25-04-2016 IPR012754 DNA-directed RNA polymerase, subunit beta-prime GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 RJP_RS00995 22d67856cdaa72b38c5ebf86806998e0 1372 Gene3D G3DSA:2.40.50.100 1147 1202 1.9E-9 T 25-04-2016 RJP_RS00995 22d67856cdaa72b38c5ebf86806998e0 1372 Pfam PF00623 RNA polymerase Rpb1, domain 2 392 485 6.0E-26 T 25-04-2016 IPR000722 RNA polymerase, alpha subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 RJP_RS00995 22d67856cdaa72b38c5ebf86806998e0 1372 Pfam PF00623 RNA polymerase Rpb1, domain 2 344 392 4.9E-8 T 25-04-2016 IPR000722 RNA polymerase, alpha subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 RJP_RS00995 22d67856cdaa72b38c5ebf86806998e0 1372 PANTHER PTHR19376 1169 1254 0.0 T 25-04-2016 RJP_RS00995 22d67856cdaa72b38c5ebf86806998e0 1372 PANTHER PTHR19376 3 937 0.0 T 25-04-2016 RJP_RS00995 22d67856cdaa72b38c5ebf86806998e0 1372 PANTHER PTHR19376 1295 1356 0.0 T 25-04-2016 RJP_RS00995 22d67856cdaa72b38c5ebf86806998e0 1372 PANTHER PTHR19376 963 1149 0.0 T 25-04-2016 RJP_RS00995 22d67856cdaa72b38c5ebf86806998e0 1372 Pfam PF04998 RNA polymerase Rpb1, domain 5 760 1306 3.7E-68 T 25-04-2016 IPR007081 RNA polymerase Rpb1, domain 5 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 RJP_RS00995 22d67856cdaa72b38c5ebf86806998e0 1372 Gene3D G3DSA:2.40.40.20 417 489 6.9E-36 T 25-04-2016 RJP_RS00995 22d67856cdaa72b38c5ebf86806998e0 1372 Gene3D G3DSA:2.40.40.20 349 376 6.9E-36 T 25-04-2016 RJP_RS00995 22d67856cdaa72b38c5ebf86806998e0 1372 Pfam PF05000 RNA polymerase Rpb1, domain 4 671 748 1.9E-16 T 25-04-2016 IPR007083 RNA polymerase Rpb1, domain 4 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 RJP_RS00995 22d67856cdaa72b38c5ebf86806998e0 1372 SMART SM00663 235 514 1.4E-179 T 25-04-2016 IPR006592 RNA polymerase, N-terminal GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 RJP_RS00995 22d67856cdaa72b38c5ebf86806998e0 1372 PANTHER PTHR19376:SF32 1169 1254 0.0 T 25-04-2016 RJP_RS00995 22d67856cdaa72b38c5ebf86806998e0 1372 PANTHER PTHR19376:SF32 3 937 0.0 T 25-04-2016 RJP_RS00995 22d67856cdaa72b38c5ebf86806998e0 1372 PANTHER PTHR19376:SF32 1295 1356 0.0 T 25-04-2016 RJP_RS00995 22d67856cdaa72b38c5ebf86806998e0 1372 PANTHER PTHR19376:SF32 963 1149 0.0 T 25-04-2016 RJP_RS00995 22d67856cdaa72b38c5ebf86806998e0 1372 Hamap MF_01323 DNA-directed RNA polymerase subunit gamma [rpoC1]. 12 636 32.105 T 25-04-2016 RJP_RS00995 22d67856cdaa72b38c5ebf86806998e0 1372 TIGRFAM TIGR02386 rpoC_TIGR: DNA-directed RNA polymerase, beta' subunit 18 1014 0.0 T 25-04-2016 IPR012754 DNA-directed RNA polymerase, subunit beta-prime GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 RJP_RS00995 22d67856cdaa72b38c5ebf86806998e0 1372 SUPERFAMILY SSF64484 1125 1356 0.0 T 25-04-2016 RJP_RS00995 22d67856cdaa72b38c5ebf86806998e0 1372 SUPERFAMILY SSF64484 15 938 0.0 T 25-04-2016 RJP_RS00995 22d67856cdaa72b38c5ebf86806998e0 1372 Pfam PF04997 RNA polymerase Rpb1, domain 1 14 342 2.8E-90 T 25-04-2016 IPR007080 RNA polymerase Rpb1, domain 1 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 RJP_RS00995 22d67856cdaa72b38c5ebf86806998e0 1372 Pfam PF04983 RNA polymerase Rpb1, domain 3 489 642 7.6E-29 T 25-04-2016 IPR007066 RNA polymerase Rpb1, domain 3 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 RJP_RS04580 c04ec69ba1d83751ea1ddd5517bcf973 127 Gene3D G3DSA:3.90.940.10 1 68 1.8E-5 T 25-04-2016 IPR012293 RNA polymerase subunit, RPB6/omega GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 RJP_RS04580 c04ec69ba1d83751ea1ddd5517bcf973 127 Hamap MF_00366 DNA-directed RNA polymerase subunit omega [rpoZ]. 1 63 13.443 T 25-04-2016 IPR003716 DNA-directed RNA polymerase, omega subunit GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 RJP_RS04580 c04ec69ba1d83751ea1ddd5517bcf973 127 SMART SM01409 8 62 4.3E-6 T 25-04-2016 IPR006110 RNA polymerase, subunit omega/K/RPB6 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 RJP_RS04580 c04ec69ba1d83751ea1ddd5517bcf973 127 TIGRFAM TIGR00690 rpoZ: DNA-directed RNA polymerase, omega subunit 1 61 3.3E-26 T 25-04-2016 IPR003716 DNA-directed RNA polymerase, omega subunit GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 RJP_RS04580 c04ec69ba1d83751ea1ddd5517bcf973 127 SUPERFAMILY SSF63562 1 76 2.79E-15 T 25-04-2016 IPR006110 RNA polymerase, subunit omega/K/RPB6 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 RJP_RS04580 c04ec69ba1d83751ea1ddd5517bcf973 127 Pfam PF01192 RNA polymerase Rpb6 8 61 1.8E-7 T 25-04-2016 IPR006110 RNA polymerase, subunit omega/K/RPB6 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 RJP_RS01480 76f59514d77ff213301ed23838ba77ec 303 Pfam PF02911 Formyl transferase, C-terminal domain 200 294 2.7E-28 T 25-04-2016 IPR005793 Formyl transferase, C-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 RJP_RS01480 76f59514d77ff213301ed23838ba77ec 303 TIGRFAM TIGR00460 fmt: methionyl-tRNA formyltransferase 2 294 2.2E-86 T 25-04-2016 IPR005794 Methionyl-tRNA formyltransferase GO:0004479|GO:0071951 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 RJP_RS01480 76f59514d77ff213301ed23838ba77ec 303 Hamap MF_00182 Methionyl-tRNA formyltransferase [fmt]. 1 297 32.762 T 25-04-2016 IPR005794 Methionyl-tRNA formyltransferase GO:0004479|GO:0071951 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 RJP_RS01480 76f59514d77ff213301ed23838ba77ec 303 PANTHER PTHR11138 2 293 1.5E-93 T 25-04-2016 RJP_RS01480 76f59514d77ff213301ed23838ba77ec 303 Gene3D G3DSA:3.40.50.170 1 201 5.0E-62 T 25-04-2016 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 RJP_RS01480 76f59514d77ff213301ed23838ba77ec 303 SUPERFAMILY SSF53328 2 203 1.7E-57 T 25-04-2016 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 RJP_RS01480 76f59514d77ff213301ed23838ba77ec 303 Pfam PF00551 Formyl transferase 3 178 8.3E-36 T 25-04-2016 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 RJP_RS01480 76f59514d77ff213301ed23838ba77ec 303 SUPERFAMILY SSF50486 201 302 5.65E-30 T 25-04-2016 IPR011034 Formyl transferase, C-terminal-like GO:0003824 RJP_RS01480 76f59514d77ff213301ed23838ba77ec 303 Gene3D G3DSA:3.10.25.10 203 302 1.1E-30 T 25-04-2016 IPR005793 Formyl transferase, C-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 RJP_RS05575 6141b1d8084adedf3e446de6faa106f3 391 PANTHER PTHR23502 3 373 5.2E-49 T 25-04-2016 RJP_RS05575 6141b1d8084adedf3e446de6faa106f3 391 SUPERFAMILY SSF103473 4 382 1.05E-56 T 25-04-2016 IPR020846 Major facilitator superfamily domain RJP_RS05575 6141b1d8084adedf3e446de6faa106f3 391 PANTHER PTHR23502:SF19 3 373 5.2E-49 T 25-04-2016 RJP_RS05575 6141b1d8084adedf3e446de6faa106f3 391 Pfam PF07690 Major Facilitator Superfamily 8 345 1.3E-44 T 25-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 RJP_RS05575 6141b1d8084adedf3e446de6faa106f3 391 Gene3D G3DSA:1.20.1250.20 202 373 2.6E-8 T 25-04-2016 RJP_RS05575 6141b1d8084adedf3e446de6faa106f3 391 Gene3D G3DSA:1.20.1250.20 5 183 1.2E-32 T 25-04-2016 RJP_RS06630 752a58dfc6dc19666b97c388a844da35 105 SMART SM01152 10 90 1.1E-21 T 25-04-2016 IPR003746 Protein of unknown function DUF167 RJP_RS06630 752a58dfc6dc19666b97c388a844da35 105 Hamap MF_00634 UPF0235 protein YggU [yggU]. 10 102 17.401 T 25-04-2016 IPR003746 Protein of unknown function DUF167 RJP_RS06630 752a58dfc6dc19666b97c388a844da35 105 Pfam PF02594 Uncharacterised ACR, YggU family COG1872 15 89 6.5E-21 T 25-04-2016 IPR003746 Protein of unknown function DUF167 RJP_RS06630 752a58dfc6dc19666b97c388a844da35 105 Gene3D G3DSA:3.30.1200.10 7 104 6.2E-22 T 25-04-2016 IPR003746 Protein of unknown function DUF167 RJP_RS06630 752a58dfc6dc19666b97c388a844da35 105 SUPERFAMILY SSF69786 4 103 1.7E-23 T 25-04-2016 IPR003746 Protein of unknown function DUF167 RJP_RS01390 0366bc4aa312ef3702e2fa6a4988a852 313 PANTHER PTHR30024 21 264 9.9E-30 T 25-04-2016 RJP_RS01390 0366bc4aa312ef3702e2fa6a4988a852 313 TIGRFAM TIGR02122 TRAP_TAXI: TRAP transporter solute receptor, TAXI family 7 296 7.9E-51 T 25-04-2016 IPR011852 TRAP transporter solute receptor, TAXI family RJP_RS01390 0366bc4aa312ef3702e2fa6a4988a852 313 Pfam PF16868 NMT1-like family 28 306 2.9E-51 T 25-04-2016 IPR011852 TRAP transporter solute receptor, TAXI family RJP_RS01390 0366bc4aa312ef3702e2fa6a4988a852 313 SUPERFAMILY SSF53850 23 283 1.65E-48 T 25-04-2016 RJP_RS01390 0366bc4aa312ef3702e2fa6a4988a852 313 Gene3D G3DSA:3.40.190.10 23 107 4.5E-31 T 25-04-2016 RJP_RS01390 0366bc4aa312ef3702e2fa6a4988a852 313 Gene3D G3DSA:3.40.190.10 248 307 4.5E-31 T 25-04-2016 RJP_RS01390 0366bc4aa312ef3702e2fa6a4988a852 313 Gene3D G3DSA:3.40.190.10 116 247 2.3E-21 T 25-04-2016 RJP_RS01390 0366bc4aa312ef3702e2fa6a4988a852 313 PANTHER PTHR30024:SF13 21 264 9.9E-30 T 25-04-2016 RJP_RS05055 2dbd86cfb89bdb4fea1792fde0d9757f 128 SUPERFAMILY SSF82093 30 128 2.09E-28 T 25-04-2016 IPR004329 CcmE/CycJ protein GO:0005886|GO:0017003|GO:0017004 RJP_RS05055 2dbd86cfb89bdb4fea1792fde0d9757f 128 Hamap MF_01959 Cytochrome c-type biogenesis protein CcmE [ccmE]. 2 128 24.386 T 25-04-2016 IPR004329 CcmE/CycJ protein GO:0005886|GO:0017003|GO:0017004 RJP_RS05055 2dbd86cfb89bdb4fea1792fde0d9757f 128 Gene3D G3DSA:2.40.50.140 26 121 1.6E-27 T 25-04-2016 IPR012340 Nucleic acid-binding, OB-fold RJP_RS05055 2dbd86cfb89bdb4fea1792fde0d9757f 128 PANTHER PTHR34128 1 127 1.1E-33 T 25-04-2016 RJP_RS05055 2dbd86cfb89bdb4fea1792fde0d9757f 128 Pfam PF03100 CcmE 6 127 4.1E-34 T 25-04-2016 IPR004329 CcmE/CycJ protein GO:0005886|GO:0017003|GO:0017004 RJP_RS03525 a02fe1f512896f00b87b4906041d8d3f 275 PIRSF PIRSF035875 1 275 9.9E-74 T 25-04-2016 IPR017039 Virulence factor BrkB RJP_RS03525 a02fe1f512896f00b87b4906041d8d3f 275 PANTHER PTHR30213 1 275 1.0E-47 T 25-04-2016 RJP_RS03525 a02fe1f512896f00b87b4906041d8d3f 275 Pfam PF03631 Virulence factor BrkB 17 270 1.2E-58 T 25-04-2016 IPR017039 Virulence factor BrkB RJP_RS03525 a02fe1f512896f00b87b4906041d8d3f 275 TIGRFAM TIGR00765 yihY_not_rbn: YihY family inner membrane protein 16 270 1.9E-29 T 25-04-2016 IPR017039 Virulence factor BrkB RJP_RS04955 5301abb394426a03bc682ed2ff1ae5f6 463 ProSitePatterns PS01008 DnaA protein signature. 421 440 - T 25-04-2016 IPR018312 Chromosomal replication control, initiator DnaA, conserved site GO:0003677|GO:0003688|GO:0005524|GO:0006270|GO:0006275 RJP_RS04955 5301abb394426a03bc682ed2ff1ae5f6 463 Pfam PF00308 Bacterial dnaA protein 126 345 1.5E-91 T 25-04-2016 IPR013317 Chromosomal replication initiator protein DnaA RJP_RS04955 5301abb394426a03bc682ed2ff1ae5f6 463 PANTHER PTHR30050 14 463 1.5E-187 T 25-04-2016 RJP_RS04955 5301abb394426a03bc682ed2ff1ae5f6 463 Gene3D G3DSA:1.10.1750.10 362 462 2.4E-37 T 25-04-2016 IPR013159 Chromosomal replication initiator, DnaA C-terminal GO:0005524|GO:0006270|GO:0006275|GO:0043565 RJP_RS04955 5301abb394426a03bc682ed2ff1ae5f6 463 Gene3D G3DSA:1.10.8.60 295 361 2.6E-28 T 25-04-2016 RJP_RS04955 5301abb394426a03bc682ed2ff1ae5f6 463 Gene3D G3DSA:3.40.50.300 124 291 3.6E-59 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RJP_RS04955 5301abb394426a03bc682ed2ff1ae5f6 463 PANTHER PTHR30050:SF2 14 463 1.5E-187 T 25-04-2016 RJP_RS04955 5301abb394426a03bc682ed2ff1ae5f6 463 Pfam PF11638 DnaA N-terminal domain 17 78 2.0E-19 T 25-04-2016 IPR024633 DnaA N-terminal domain RJP_RS04955 5301abb394426a03bc682ed2ff1ae5f6 463 SUPERFAMILY SSF52540 128 339 7.04E-41 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RJP_RS04955 5301abb394426a03bc682ed2ff1ae5f6 463 SMART SM00382 160 288 6.4E-9 T 25-04-2016 IPR003593 AAA+ ATPase domain RJP_RS04955 5301abb394426a03bc682ed2ff1ae5f6 463 Hamap MF_00377 Chromosomal replication initiator protein DnaA [dnaA]. 16 462 32.743 T 25-04-2016 IPR001957 Chromosomal replication control, initiator DnaA GO:0003677|GO:0003688|GO:0005524|GO:0006270|GO:0006275 RJP_RS04955 5301abb394426a03bc682ed2ff1ae5f6 463 SUPERFAMILY SSF48295 358 463 1.36E-35 T 25-04-2016 IPR010921 Trp repressor/replication initiator GO:0043565 RJP_RS04955 5301abb394426a03bc682ed2ff1ae5f6 463 TIGRFAM TIGR00362 DnaA: chromosomal replication initiator protein DnaA 19 460 5.0E-169 T 25-04-2016 IPR001957 Chromosomal replication control, initiator DnaA GO:0003677|GO:0003688|GO:0005524|GO:0006270|GO:0006275 RJP_RS04955 5301abb394426a03bc682ed2ff1ae5f6 463 SMART SM00760 371 440 1.3E-37 T 25-04-2016 IPR013159 Chromosomal replication initiator, DnaA C-terminal GO:0005524|GO:0006270|GO:0006275|GO:0043565 RJP_RS04955 5301abb394426a03bc682ed2ff1ae5f6 463 Pfam PF08299 Bacterial dnaA protein helix-turn-helix 372 440 2.5E-28 T 25-04-2016 IPR013159 Chromosomal replication initiator, DnaA C-terminal GO:0005524|GO:0006270|GO:0006275|GO:0043565 RJP_RS04955 5301abb394426a03bc682ed2ff1ae5f6 463 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 225 239 5.7E-47 T 25-04-2016 IPR020591 Chromosomal replication control, initiator DnaA-like RJP_RS04955 5301abb394426a03bc682ed2ff1ae5f6 463 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 161 181 5.7E-47 T 25-04-2016 IPR020591 Chromosomal replication control, initiator DnaA-like RJP_RS04955 5301abb394426a03bc682ed2ff1ae5f6 463 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 421 440 5.7E-47 T 25-04-2016 IPR020591 Chromosomal replication control, initiator DnaA-like RJP_RS04955 5301abb394426a03bc682ed2ff1ae5f6 463 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 259 286 5.7E-47 T 25-04-2016 IPR020591 Chromosomal replication control, initiator DnaA-like RJP_RS04955 5301abb394426a03bc682ed2ff1ae5f6 463 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 193 207 5.7E-47 T 25-04-2016 IPR020591 Chromosomal replication control, initiator DnaA-like RJP_RS05040 7aa4aa01e2931f9561f7e76042942611 251 Pfam PF05857 TraX protein 13 240 4.1E-48 T 25-04-2016 IPR008875 TraX RJP_RS06715 6395db0e9d56a08577ac5ff790db3369 135 PANTHER PTHR33653:SF1 1 135 1.3E-25 T 25-04-2016 RJP_RS06715 6395db0e9d56a08577ac5ff790db3369 135 PANTHER PTHR33653 1 135 1.3E-25 T 25-04-2016 RJP_RS06715 6395db0e9d56a08577ac5ff790db3369 135 SUPERFAMILY SSF88723 1 134 2.64E-27 T 25-04-2016 IPR029060 PIN domain-like RJP_RS06715 6395db0e9d56a08577ac5ff790db3369 135 Pfam PF01850 PIN domain 3 121 2.7E-16 T 25-04-2016 IPR002716 PIN domain RJP_RS06715 6395db0e9d56a08577ac5ff790db3369 135 Gene3D G3DSA:3.40.50.1010 1 125 6.7E-20 T 25-04-2016 IPR029060 PIN domain-like RJP_RS03355 73f56e4195e34413f3d3c1726d4820fb 67 Gene3D G3DSA:2.160.10.10 2 64 2.8E-12 T 25-04-2016 RJP_RS03355 73f56e4195e34413f3d3c1726d4820fb 67 PANTHER PTHR13061 1 64 1.8E-22 T 25-04-2016 RJP_RS03355 73f56e4195e34413f3d3c1726d4820fb 67 SUPERFAMILY SSF51161 2 63 1.77E-12 T 25-04-2016 IPR011004 Trimeric LpxA-like RJP_RS02715 dfd58e01f2aa300d0d600d36f28461a1 310 PANTHER PTHR31752:SF13 11 29 4.5E-25 T 25-04-2016 RJP_RS02715 dfd58e01f2aa300d0d600d36f28461a1 310 PANTHER PTHR31752:SF13 83 310 4.5E-25 T 25-04-2016 RJP_RS02715 dfd58e01f2aa300d0d600d36f28461a1 310 Pfam PF03547 Membrane transport protein 152 305 2.5E-11 T 25-04-2016 IPR004776 Auxin efflux carrier GO:0016021|GO:0055085 RJP_RS02715 dfd58e01f2aa300d0d600d36f28461a1 310 PANTHER PTHR31752 11 29 4.5E-25 T 25-04-2016 RJP_RS02715 dfd58e01f2aa300d0d600d36f28461a1 310 PANTHER PTHR31752 83 310 4.5E-25 T 25-04-2016 RJP_RS03960 aafa40d46d113af0480c65158d6fcf66 224 Pfam PF02602 Uroporphyrinogen-III synthase HemD 30 195 3.0E-8 T 25-04-2016 IPR003754 Tetrapyrrole biosynthesis, uroporphyrinogen III synthase GO:0004852|GO:0033014 KEGG: 00860+4.2.1.75|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 RJP_RS03960 aafa40d46d113af0480c65158d6fcf66 224 SUPERFAMILY SSF69618 1 218 9.81E-20 T 25-04-2016 IPR003754 Tetrapyrrole biosynthesis, uroporphyrinogen III synthase GO:0004852|GO:0033014 KEGG: 00860+4.2.1.75|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 RJP_RS04410 6c5efbea21db877d2b1dc3f66df40e27 307 PIRSF PIRSF004486 1 306 5.3E-115 T 25-04-2016 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 RJP_RS04410 6c5efbea21db877d2b1dc3f66df40e27 307 Pfam PF01795 MraW methylase family 4 303 2.7E-101 T 25-04-2016 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 RJP_RS04410 6c5efbea21db877d2b1dc3f66df40e27 307 Hamap MF_01007 Ribosomal RNA small subunit methyltransferase H [rsmH]. 5 305 36.36 T 25-04-2016 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 RJP_RS04410 6c5efbea21db877d2b1dc3f66df40e27 307 SUPERFAMILY SSF53335 4 108 2.84E-47 T 25-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RJP_RS04410 6c5efbea21db877d2b1dc3f66df40e27 307 SUPERFAMILY SSF53335 207 303 2.84E-47 T 25-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RJP_RS04410 6c5efbea21db877d2b1dc3f66df40e27 307 SUPERFAMILY SSF81799 109 207 3.27E-35 T 25-04-2016 IPR023397 S-adenosyl-L-methionine-dependent methyltransferase, MraW, recognition domain GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 RJP_RS04410 6c5efbea21db877d2b1dc3f66df40e27 307 Gene3D G3DSA:3.40.50.150 210 305 1.6E-54 T 25-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RJP_RS04410 6c5efbea21db877d2b1dc3f66df40e27 307 Gene3D G3DSA:3.40.50.150 5 105 1.6E-54 T 25-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RJP_RS04410 6c5efbea21db877d2b1dc3f66df40e27 307 TIGRFAM TIGR00006 TIGR00006: 16S rRNA (cytosine(1402)-N(4))-methyltransferase 3 303 4.6E-103 T 25-04-2016 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 RJP_RS04410 6c5efbea21db877d2b1dc3f66df40e27 307 PANTHER PTHR11265 1 307 1.2E-142 T 25-04-2016 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 RJP_RS04410 6c5efbea21db877d2b1dc3f66df40e27 307 Gene3D G3DSA:1.10.150.170 108 209 4.3E-35 T 25-04-2016 IPR023397 S-adenosyl-L-methionine-dependent methyltransferase, MraW, recognition domain GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 RJP_RS04410 6c5efbea21db877d2b1dc3f66df40e27 307 PANTHER PTHR11265:SF0 1 307 1.2E-142 T 25-04-2016 RJP_RS03155 1a4a52b96d1bc60386a5c7774cacbc01 292 PANTHER PTHR11117 1 291 3.0E-198 T 25-04-2016 RJP_RS03155 1a4a52b96d1bc60386a5c7774cacbc01 292 PIRSF PIRSF001553 1 291 3.5E-131 T 25-04-2016 IPR005810 Succinyl-CoA ligase, alpha subunit GO:0003824|GO:0008152 RJP_RS03155 1a4a52b96d1bc60386a5c7774cacbc01 292 SUPERFAMILY SSF51735 1 122 1.97E-43 T 25-04-2016 IPR016040 NAD(P)-binding domain RJP_RS03155 1a4a52b96d1bc60386a5c7774cacbc01 292 SUPERFAMILY SSF52210 123 288 5.49E-54 T 25-04-2016 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|UniPathway: UPA00223 RJP_RS03155 1a4a52b96d1bc60386a5c7774cacbc01 292 Gene3D G3DSA:3.40.50.720 3 119 1.0E-57 T 25-04-2016 IPR016040 NAD(P)-binding domain RJP_RS03155 1a4a52b96d1bc60386a5c7774cacbc01 292 ProSitePatterns PS01216 ATP-citrate lyase / succinyl-CoA ligases family signature 1. 152 181 - T 25-04-2016 IPR005810 Succinyl-CoA ligase, alpha subunit GO:0003824|GO:0008152 RJP_RS03155 1a4a52b96d1bc60386a5c7774cacbc01 292 TIGRFAM TIGR01019 sucCoAalpha: succinate-CoA ligase, alpha subunit 3 289 1.7E-146 T 25-04-2016 IPR005810 Succinyl-CoA ligase, alpha subunit GO:0003824|GO:0008152 RJP_RS03155 1a4a52b96d1bc60386a5c7774cacbc01 292 Pfam PF00549 CoA-ligase 151 271 1.6E-20 T 25-04-2016 IPR005811 ATP-citrate lyase/succinyl-CoA ligase GO:0003824|GO:0008152 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|UniPathway: UPA00223 RJP_RS03155 1a4a52b96d1bc60386a5c7774cacbc01 292 SMART SM00881 4 100 5.0E-33 T 25-04-2016 IPR003781 CoA-binding GO:0048037 RJP_RS03155 1a4a52b96d1bc60386a5c7774cacbc01 292 ProSitePatterns PS00399 ATP-citrate lyase / succinyl-CoA ligases family active site. 237 250 - T 25-04-2016 IPR017440 ATP-citrate lyase/succinyl-CoA ligase, active site RJP_RS03155 1a4a52b96d1bc60386a5c7774cacbc01 292 Pfam PF02629 CoA binding domain 6 99 7.0E-31 T 25-04-2016 IPR003781 CoA-binding GO:0048037 RJP_RS03155 1a4a52b96d1bc60386a5c7774cacbc01 292 Gene3D G3DSA:3.40.50.261 120 288 1.8E-76 T 25-04-2016 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|UniPathway: UPA00223 RJP_RS03155 1a4a52b96d1bc60386a5c7774cacbc01 292 PRINTS PR01798 Succinyl-CoA synthase signature 177 195 2.7E-40 T 25-04-2016 IPR005810 Succinyl-CoA ligase, alpha subunit GO:0003824|GO:0008152 RJP_RS03155 1a4a52b96d1bc60386a5c7774cacbc01 292 PRINTS PR01798 Succinyl-CoA synthase signature 82 99 2.7E-40 T 25-04-2016 IPR005810 Succinyl-CoA ligase, alpha subunit GO:0003824|GO:0008152 RJP_RS03155 1a4a52b96d1bc60386a5c7774cacbc01 292 PRINTS PR01798 Succinyl-CoA synthase signature 208 221 2.7E-40 T 25-04-2016 IPR005810 Succinyl-CoA ligase, alpha subunit GO:0003824|GO:0008152 RJP_RS03155 1a4a52b96d1bc60386a5c7774cacbc01 292 PRINTS PR01798 Succinyl-CoA synthase signature 241 258 2.7E-40 T 25-04-2016 IPR005810 Succinyl-CoA ligase, alpha subunit GO:0003824|GO:0008152 RJP_RS06755 85176a36dd967342ce091491a1ebc4ed 245 PIRSF PIRSF001430 1 245 5.2E-72 T 25-04-2016 IPR001406 Pseudouridine synthase I, TruA GO:0001522|GO:0003723|GO:0009451|GO:0009982 RJP_RS06755 85176a36dd967342ce091491a1ebc4ed 245 PANTHER PTHR11142 1 245 4.8E-84 T 25-04-2016 IPR001406 Pseudouridine synthase I, TruA GO:0001522|GO:0003723|GO:0009451|GO:0009982 RJP_RS06755 85176a36dd967342ce091491a1ebc4ed 245 Gene3D G3DSA:3.30.70.660 107 242 6.3E-49 T 25-04-2016 IPR020095 Pseudouridine synthase I, TruA, C-terminal GO:0001522|GO:0003723|GO:0009451|GO:0009982 RJP_RS06755 85176a36dd967342ce091491a1ebc4ed 245 Hamap MF_00171 tRNA pseudouridine synthase A [truA]. 2 245 33.504 T 25-04-2016 IPR001406 Pseudouridine synthase I, TruA GO:0001522|GO:0003723|GO:0009451|GO:0009982 RJP_RS06755 85176a36dd967342ce091491a1ebc4ed 245 Gene3D G3DSA:3.30.70.580 1 106 1.3E-31 T 25-04-2016 IPR020094 Pseudouridine synthase I, TruA, N-terminal GO:0001522|GO:0003723|GO:0009451|GO:0009982 RJP_RS06755 85176a36dd967342ce091491a1ebc4ed 245 TIGRFAM TIGR00071 hisT_truA: tRNA pseudouridine(38-40) synthase 4 239 4.1E-57 T 25-04-2016 IPR001406 Pseudouridine synthase I, TruA GO:0001522|GO:0003723|GO:0009451|GO:0009982 RJP_RS06755 85176a36dd967342ce091491a1ebc4ed 245 Pfam PF01416 tRNA pseudouridine synthase 8 104 6.3E-7 T 25-04-2016 IPR020097 Pseudouridine synthase I, TruA, alpha/beta domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 RJP_RS06755 85176a36dd967342ce091491a1ebc4ed 245 Pfam PF01416 tRNA pseudouridine synthase 144 245 1.2E-28 T 25-04-2016 IPR020097 Pseudouridine synthase I, TruA, alpha/beta domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 RJP_RS06755 85176a36dd967342ce091491a1ebc4ed 245 SUPERFAMILY SSF55120 1 245 8.2E-84 T 25-04-2016 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 RJP_RS01080 acc0cc9d2d8d17026cb4e33d9bd7aedc 515 PANTHER PTHR23501:SF51 12 502 1.4E-165 T 25-04-2016 RJP_RS01080 acc0cc9d2d8d17026cb4e33d9bd7aedc 515 PANTHER PTHR23501 12 502 1.4E-165 T 25-04-2016 RJP_RS01080 acc0cc9d2d8d17026cb4e33d9bd7aedc 515 Pfam PF07690 Major Facilitator Superfamily 24 417 2.3E-39 T 25-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 RJP_RS01080 acc0cc9d2d8d17026cb4e33d9bd7aedc 515 PRINTS PR01036 Tetracycline resistance protein TetB signature 408 427 3.0E-5 T 25-04-2016 RJP_RS01080 acc0cc9d2d8d17026cb4e33d9bd7aedc 515 PRINTS PR01036 Tetracycline resistance protein TetB signature 142 166 3.0E-5 T 25-04-2016 RJP_RS01080 acc0cc9d2d8d17026cb4e33d9bd7aedc 515 PRINTS PR01036 Tetracycline resistance protein TetB signature 21 45 3.0E-5 T 25-04-2016 RJP_RS01080 acc0cc9d2d8d17026cb4e33d9bd7aedc 515 PRINTS PR01036 Tetracycline resistance protein TetB signature 167 191 3.0E-5 T 25-04-2016 RJP_RS01080 acc0cc9d2d8d17026cb4e33d9bd7aedc 515 Gene3D G3DSA:1.20.1250.20 19 191 1.0E-19 T 25-04-2016 RJP_RS01080 acc0cc9d2d8d17026cb4e33d9bd7aedc 515 SUPERFAMILY SSF103473 6 200 8.5E-55 T 25-04-2016 IPR020846 Major facilitator superfamily domain RJP_RS01080 acc0cc9d2d8d17026cb4e33d9bd7aedc 515 SUPERFAMILY SSF103473 255 427 8.5E-55 T 25-04-2016 IPR020846 Major facilitator superfamily domain RJP_RS01080 acc0cc9d2d8d17026cb4e33d9bd7aedc 515 TIGRFAM TIGR00711 efflux_EmrB: drug resistance MFS transporter, drug:H+ antiporter-2 (14 Spanner) (DHA2) family 16 507 1.8E-184 T 25-04-2016 IPR004638 Drug resistance transporter EmrB/QacA subfamily GO:0006810|GO:0016021 RJP_RS01080 acc0cc9d2d8d17026cb4e33d9bd7aedc 515 Gene3D G3DSA:1.20.1250.20 271 427 6.5E-17 T 25-04-2016 RJP_RS00615 ef5dc5b96c469b6d57d2c4f08b2e55cb 294 Pfam PF00892 EamA-like transporter family 10 141 1.8E-21 T 25-04-2016 IPR000620 EamA domain GO:0016020|GO:0016021 RJP_RS00615 ef5dc5b96c469b6d57d2c4f08b2e55cb 294 Pfam PF00892 EamA-like transporter family 152 280 7.8E-13 T 25-04-2016 IPR000620 EamA domain GO:0016020|GO:0016021 RJP_RS00615 ef5dc5b96c469b6d57d2c4f08b2e55cb 294 SUPERFAMILY SSF103481 44 143 1.07E-14 T 25-04-2016 RJP_RS00615 ef5dc5b96c469b6d57d2c4f08b2e55cb 294 PANTHER PTHR22911:SF70 9 292 7.0E-123 T 25-04-2016 RJP_RS00615 ef5dc5b96c469b6d57d2c4f08b2e55cb 294 PANTHER PTHR22911 9 292 7.0E-123 T 25-04-2016 RJP_RS00615 ef5dc5b96c469b6d57d2c4f08b2e55cb 294 SUPERFAMILY SSF103481 187 283 1.57E-10 T 25-04-2016 RJP_RS05545 fcdace171e212eb29a70c72c0a28c474 183 PANTHER PTHR13256 19 180 2.1E-39 T 25-04-2016 RJP_RS05545 fcdace171e212eb29a70c72c0a28c474 183 SUPERFAMILY SSF55729 10 181 9.9E-42 T 25-04-2016 IPR016181 Acyl-CoA N-acyltransferase RJP_RS05545 fcdace171e212eb29a70c72c0a28c474 183 Gene3D G3DSA:3.40.630.30 10 181 3.5E-41 T 25-04-2016 IPR016181 Acyl-CoA N-acyltransferase RJP_RS05545 fcdace171e212eb29a70c72c0a28c474 183 Pfam PF13302 Acetyltransferase (GNAT) domain 19 157 1.5E-24 T 25-04-2016 IPR000182 GNAT domain GO:0008080 RJP_RS05955 7be40a14408ab996098837999170848e 404 SUPERFAMILY SSF53633 4 246 5.37E-75 T 25-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 RJP_RS05955 7be40a14408ab996098837999170848e 404 SUPERFAMILY SSF55021 325 398 8.39E-12 T 25-04-2016 RJP_RS05955 7be40a14408ab996098837999170848e 404 PRINTS PR00474 Glutamate 5-kinase family signature 33 47 1.8E-5 T 25-04-2016 IPR001057 Glutamate/acetylglutamate kinase GO:0006561 RJP_RS05955 7be40a14408ab996098837999170848e 404 PRINTS PR00474 Glutamate 5-kinase family signature 155 182 1.8E-5 T 25-04-2016 IPR001057 Glutamate/acetylglutamate kinase GO:0006561 RJP_RS05955 7be40a14408ab996098837999170848e 404 PRINTS PR00474 Glutamate 5-kinase family signature 119 140 1.8E-5 T 25-04-2016 IPR001057 Glutamate/acetylglutamate kinase GO:0006561 RJP_RS05955 7be40a14408ab996098837999170848e 404 TIGRFAM TIGR00657 asp_kinases: aspartate kinase 61 398 2.6E-113 T 25-04-2016 IPR001341 Aspartate kinase domain GO:0004072|GO:0008652 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|UniPathway: UPA00034|UniPathway: UPA00050|UniPathway: UPA00051 RJP_RS05955 7be40a14408ab996098837999170848e 404 PANTHER PTHR21499 1 391 8.2E-104 T 25-04-2016 RJP_RS05955 7be40a14408ab996098837999170848e 404 PANTHER PTHR21499:SF27 1 391 8.2E-104 T 25-04-2016 RJP_RS05955 7be40a14408ab996098837999170848e 404 PIRSF PIRSF000726 62 403 2.1E-89 T 25-04-2016 IPR005260 Aspartate kinase, monofunctional class GO:0004072|GO:0009089 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|UniPathway: UPA00034|UniPathway: UPA00050|UniPathway: UPA00051 RJP_RS05955 7be40a14408ab996098837999170848e 404 Gene3D G3DSA:3.40.1160.10 1 251 2.4E-71 T 25-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 RJP_RS05955 7be40a14408ab996098837999170848e 404 ProSitePatterns PS00324 Aspartokinase signature. 5 13 - T 25-04-2016 IPR018042 Aspartate kinase, conserved site GO:0004072|GO:0008652 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|UniPathway: UPA00034|UniPathway: UPA00050|UniPathway: UPA00051 RJP_RS05955 7be40a14408ab996098837999170848e 404 Pfam PF00696 Amino acid kinase family 3 232 3.8E-52 T 25-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 RJP_RS01870 dbf8367f9a1f4b9b52dc03981e2886bc 609 PANTHER PTHR23115 190 600 3.4E-273 T 25-04-2016 RJP_RS01870 dbf8367f9a1f4b9b52dc03981e2886bc 609 PANTHER PTHR23115 4 169 3.4E-273 T 25-04-2016 RJP_RS01870 dbf8367f9a1f4b9b52dc03981e2886bc 609 PANTHER PTHR23115:SF14 190 600 3.4E-273 T 25-04-2016 IPR006298 GTP-binding protein TypA GO:0005525 RJP_RS01870 dbf8367f9a1f4b9b52dc03981e2886bc 609 PANTHER PTHR23115:SF14 4 169 3.4E-273 T 25-04-2016 IPR006298 GTP-binding protein TypA GO:0005525 RJP_RS01870 dbf8367f9a1f4b9b52dc03981e2886bc 609 Pfam PF03144 Elongation factor Tu domain 2 225 296 6.4E-13 T 25-04-2016 IPR004161 Translation elongation factor EFTu/EF1A, domain 2 GO:0005525 RJP_RS01870 dbf8367f9a1f4b9b52dc03981e2886bc 609 Gene3D G3DSA:2.40.30.10 212 309 1.9E-25 T 25-04-2016 RJP_RS01870 dbf8367f9a1f4b9b52dc03981e2886bc 609 Gene3D G3DSA:2.40.50.250 490 583 6.7E-41 T 25-04-2016 RJP_RS01870 dbf8367f9a1f4b9b52dc03981e2886bc 609 Pfam PF00679 Elongation factor G C-terminus 405 489 7.9E-19 T 25-04-2016 IPR000640 Translation elongation factor EFG, V domain RJP_RS01870 dbf8367f9a1f4b9b52dc03981e2886bc 609 Gene3D G3DSA:3.30.70.870 310 407 2.8E-32 T 25-04-2016 RJP_RS01870 dbf8367f9a1f4b9b52dc03981e2886bc 609 TIGRFAM TIGR01394 TypA_BipA: GTP-binding protein TypA/BipA 4 606 1.3E-289 T 25-04-2016 IPR006298 GTP-binding protein TypA GO:0005525 RJP_RS01870 dbf8367f9a1f4b9b52dc03981e2886bc 609 Gene3D G3DSA:3.30.70.240 408 489 3.9E-28 T 25-04-2016 IPR000640 Translation elongation factor EFG, V domain RJP_RS01870 dbf8367f9a1f4b9b52dc03981e2886bc 609 SUPERFAMILY SSF50447 151 173 6.24E-30 T 25-04-2016 IPR009000 Translation protein, beta-barrel domain RJP_RS01870 dbf8367f9a1f4b9b52dc03981e2886bc 609 SUPERFAMILY SSF50447 206 306 6.24E-30 T 25-04-2016 IPR009000 Translation protein, beta-barrel domain RJP_RS01870 dbf8367f9a1f4b9b52dc03981e2886bc 609 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 43 58 - T 25-04-2016 IPR031157 Tr-type G domain, conserved site RJP_RS01870 dbf8367f9a1f4b9b52dc03981e2886bc 609 Gene3D G3DSA:3.40.50.300 2 211 2.1E-65 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RJP_RS01870 dbf8367f9a1f4b9b52dc03981e2886bc 609 SUPERFAMILY SSF52540 3 225 7.95E-55 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RJP_RS01870 dbf8367f9a1f4b9b52dc03981e2886bc 609 SUPERFAMILY SSF54980 406 520 1.58E-23 T 25-04-2016 IPR009022 Elongation factor G, III-V domain RJP_RS01870 dbf8367f9a1f4b9b52dc03981e2886bc 609 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 3 144 4.6E-24 T 25-04-2016 IPR005225 Small GTP-binding protein domain GO:0005525 RJP_RS01870 dbf8367f9a1f4b9b52dc03981e2886bc 609 SUPERFAMILY SSF54980 309 394 1.76E-12 T 25-04-2016 IPR009022 Elongation factor G, III-V domain RJP_RS01870 dbf8367f9a1f4b9b52dc03981e2886bc 609 Pfam PF00009 Elongation factor Tu GTP binding domain 3 201 1.3E-55 T 25-04-2016 RJP_RS01870 dbf8367f9a1f4b9b52dc03981e2886bc 609 PRINTS PR00315 GTP-binding elongation factor signature 50 58 4.0E-15 T 25-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 RJP_RS01870 dbf8367f9a1f4b9b52dc03981e2886bc 609 PRINTS PR00315 GTP-binding elongation factor signature 70 80 4.0E-15 T 25-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 RJP_RS01870 dbf8367f9a1f4b9b52dc03981e2886bc 609 PRINTS PR00315 GTP-binding elongation factor signature 6 19 4.0E-15 T 25-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 RJP_RS01870 dbf8367f9a1f4b9b52dc03981e2886bc 609 PRINTS PR00315 GTP-binding elongation factor signature 122 131 4.0E-15 T 25-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 RJP_RS01870 dbf8367f9a1f4b9b52dc03981e2886bc 609 PRINTS PR00315 GTP-binding elongation factor signature 86 97 4.0E-15 T 25-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 RJP_RS05350 fa9795418599fde4b013be39625c17b1 88 Pfam PF03083 Sugar efflux transporter for intercellular exchange 28 88 1.8E-6 T 25-04-2016 IPR004316 SWEET sugar transporter GO:0016021 RJP_RS03660 b9bdc463e02468b8db3676047975a9c2 80 SMART SM00411 2 79 3.1E-10 T 25-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 RJP_RS03660 b9bdc463e02468b8db3676047975a9c2 80 SUPERFAMILY SSF47729 2 58 8.24E-13 T 25-04-2016 IPR010992 Integration host factor (IHF)-like DNA-binding domain GO:0003677 RJP_RS03660 b9bdc463e02468b8db3676047975a9c2 80 Gene3D G3DSA:4.10.520.10 3 58 2.6E-14 T 25-04-2016 IPR010992 Integration host factor (IHF)-like DNA-binding domain GO:0003677 RJP_RS03660 b9bdc463e02468b8db3676047975a9c2 80 PANTHER PTHR33175 2 58 7.0E-13 T 25-04-2016 RJP_RS03660 b9bdc463e02468b8db3676047975a9c2 80 Pfam PF00216 Bacterial DNA-binding protein 3 58 5.7E-13 T 25-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 RJP_RS01850 b3f8231e2c7031ea2a17b9ae8cf92a11 393 PANTHER PTHR22935 20 357 1.4E-43 T 25-04-2016 RJP_RS01850 b3f8231e2c7031ea2a17b9ae8cf92a11 393 SUPERFAMILY SSF56601 23 359 4.23E-60 T 25-04-2016 IPR012338 Beta-lactamase/transpeptidase-like RJP_RS01850 b3f8231e2c7031ea2a17b9ae8cf92a11 393 Pfam PF00144 Beta-lactamase 36 370 1.2E-65 T 25-04-2016 IPR001466 Beta-lactamase-related RJP_RS01850 b3f8231e2c7031ea2a17b9ae8cf92a11 393 Gene3D G3DSA:3.40.710.10 20 357 9.2E-60 T 25-04-2016 IPR012338 Beta-lactamase/transpeptidase-like RJP_RS05120 13e33bb9c7077cfdc9286b46d93ed94e 125 Gene3D G3DSA:4.10.910.10 73 123 3.8E-23 T 25-04-2016 IPR027437 30s ribosomal protein S13, C-terminal RJP_RS05120 13e33bb9c7077cfdc9286b46d93ed94e 125 TIGRFAM TIGR03631 uS13_bact: ribosomal protein uS13 3 114 7.6E-51 T 25-04-2016 IPR019980 Ribosomal protein S13, bacterial-type GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 RJP_RS05120 13e33bb9c7077cfdc9286b46d93ed94e 125 PIRSF PIRSF002134 1 125 2.1E-43 T 25-04-2016 IPR001892 Ribosomal protein S13 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 RJP_RS05120 13e33bb9c7077cfdc9286b46d93ed94e 125 ProSitePatterns PS00646 Ribosomal protein S13 signature. 88 101 - T 25-04-2016 IPR018269 Ribosomal protein S13, conserved site GO:0003723|GO:0003735|GO:0005840|GO:0006412 RJP_RS05120 13e33bb9c7077cfdc9286b46d93ed94e 125 SUPERFAMILY SSF46946 2 122 1.02E-43 T 25-04-2016 IPR010979 Ribosomal protein S13-like, H2TH GO:0003676 RJP_RS05120 13e33bb9c7077cfdc9286b46d93ed94e 125 Hamap MF_01315 30S ribosomal protein S13 [rpsM]. 1 120 26.489 T 25-04-2016 IPR001892 Ribosomal protein S13 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 RJP_RS05120 13e33bb9c7077cfdc9286b46d93ed94e 125 Pfam PF00416 Ribosomal protein S13/S18 3 109 8.3E-30 T 25-04-2016 IPR001892 Ribosomal protein S13 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 RJP_RS05120 13e33bb9c7077cfdc9286b46d93ed94e 125 Gene3D G3DSA:1.10.8.50 2 72 4.3E-29 T 25-04-2016 RJP_RS05120 13e33bb9c7077cfdc9286b46d93ed94e 125 PANTHER PTHR10871 2 124 1.2E-58 T 25-04-2016 RJP_RS01050 b7568d275f6b6aeee68602c857c9121e 483 Hamap MF_00121 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B [gatB]. 10 482 38.238 T 25-04-2016 IPR004413 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, B subunit GO:0016884 RJP_RS01050 b7568d275f6b6aeee68602c857c9121e 483 SMART SM00845 335 481 4.9E-81 T 25-04-2016 IPR018027 Asn/Gln amidotransferase GO:0016884 RJP_RS01050 b7568d275f6b6aeee68602c857c9121e 483 PANTHER PTHR11659 10 483 1.2E-260 T 25-04-2016 IPR017959 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, subunit B /E GO:0016884 RJP_RS01050 b7568d275f6b6aeee68602c857c9121e 483 SUPERFAMILY SSF89095 304 409 2.09E-33 T 25-04-2016 IPR003789 Aspartyl/glutamyl-tRNA amidotransferase subunit B-related GO:0016884 RJP_RS01050 b7568d275f6b6aeee68602c857c9121e 483 SUPERFAMILY SSF55931 12 303 1.05E-116 T 25-04-2016 RJP_RS01050 b7568d275f6b6aeee68602c857c9121e 483 PANTHER PTHR11659:SF0 10 483 1.2E-260 T 25-04-2016 RJP_RS01050 b7568d275f6b6aeee68602c857c9121e 483 Pfam PF02637 GatB domain 336 481 2.5E-56 T 25-04-2016 IPR018027 Asn/Gln amidotransferase GO:0016884 RJP_RS01050 b7568d275f6b6aeee68602c857c9121e 483 Gene3D G3DSA:1.10.10.410 427 482 1.5E-5 T 25-04-2016 IPR023168 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B, C-terminal RJP_RS01050 b7568d275f6b6aeee68602c857c9121e 483 ProSitePatterns PS01234 Glutamyl-tRNA(Gln) amidotransferase subunit B signature. 152 166 - T 25-04-2016 IPR017958 Glutamyl-tRNA(Gln) amidotransferase, subunit B, conserved site GO:0016884 RJP_RS01050 b7568d275f6b6aeee68602c857c9121e 483 TIGRFAM TIGR00133 gatB: aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, B subunit 11 482 1.5E-179 T 25-04-2016 IPR004413 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, B subunit GO:0016884 RJP_RS01050 b7568d275f6b6aeee68602c857c9121e 483 Pfam PF02934 GatB/GatE catalytic domain 14 295 1.8E-113 T 25-04-2016 IPR006075 Aspartyl/Glutamyl-tRNA(Gln) amidotransferase, subunit B/E, catalytic GO:0016874 RJP_RS05310 66e9b2785ae93526dab5f9f7c7a2c0bc 70 SUPERFAMILY SSF50249 3 68 6.64E-20 T 25-04-2016 IPR012340 Nucleic acid-binding, OB-fold RJP_RS05310 66e9b2785ae93526dab5f9f7c7a2c0bc 70 SMART SM00357 6 70 6.1E-26 T 25-04-2016 IPR011129 Cold shock protein GO:0003676 RJP_RS05310 66e9b2785ae93526dab5f9f7c7a2c0bc 70 Gene3D G3DSA:2.40.50.140 6 68 1.0E-23 T 25-04-2016 IPR012340 Nucleic acid-binding, OB-fold RJP_RS05310 66e9b2785ae93526dab5f9f7c7a2c0bc 70 PANTHER PTHR11544 1 68 9.9E-14 T 25-04-2016 RJP_RS05310 66e9b2785ae93526dab5f9f7c7a2c0bc 70 PIRSF PIRSF002599 1 70 6.1E-20 T 25-04-2016 IPR012156 Cold shock, CspA GO:0003676 RJP_RS05310 66e9b2785ae93526dab5f9f7c7a2c0bc 70 Pfam PF00313 'Cold-shock' DNA-binding domain 7 67 2.5E-22 T 25-04-2016 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 RJP_RS05310 66e9b2785ae93526dab5f9f7c7a2c0bc 70 ProSitePatterns PS00352 'Cold-shock' domain signature. 18 37 - T 25-04-2016 IPR019844 Cold-shock conserved site RJP_RS05310 66e9b2785ae93526dab5f9f7c7a2c0bc 70 PRINTS PR00050 Cold shock protein signature 28 37 4.3E-11 T 25-04-2016 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 RJP_RS05310 66e9b2785ae93526dab5f9f7c7a2c0bc 70 PRINTS PR00050 Cold shock protein signature 43 61 4.3E-11 T 25-04-2016 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 RJP_RS05310 66e9b2785ae93526dab5f9f7c7a2c0bc 70 PRINTS PR00050 Cold shock protein signature 7 22 4.3E-11 T 25-04-2016 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 RJP_RS04065 c416dbdcdf376468a3b96fce84774007 410 PANTHER PTHR11601:SF34 11 410 3.5E-246 T 25-04-2016 RJP_RS04065 c416dbdcdf376468a3b96fce84774007 410 PIRSF PIRSF005572 9 390 4.4E-133 T 25-04-2016 IPR016454 Cysteine desulfurase KEGG: 00730+2.8.1.7|MetaCyc: PWY-6823|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7250 RJP_RS04065 c416dbdcdf376468a3b96fce84774007 410 Pfam PF00266 Aminotransferase class-V 12 374 5.2E-89 T 25-04-2016 IPR000192 Aminotransferase class V domain RJP_RS04065 c416dbdcdf376468a3b96fce84774007 410 SUPERFAMILY SSF53383 12 397 1.73E-106 T 25-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase RJP_RS04065 c416dbdcdf376468a3b96fce84774007 410 Gene3D G3DSA:3.40.640.10 24 257 1.9E-97 T 25-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 RJP_RS04065 c416dbdcdf376468a3b96fce84774007 410 Hamap MF_00331 Cysteine desulfurase IscS [iscS]. 8 401 55.56 T 25-04-2016 IPR010240 Cysteine desulfurase IscS GO:0030170|GO:0031071|GO:0044571 KEGG: 00730+2.8.1.7|MetaCyc: PWY-6823|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7250|UniPathway: UPA00266 RJP_RS04065 c416dbdcdf376468a3b96fce84774007 410 Gene3D G3DSA:3.90.1150.10 258 379 1.3E-45 T 25-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 RJP_RS04065 c416dbdcdf376468a3b96fce84774007 410 ProSitePatterns PS00595 Aminotransferases class-V pyridoxal-phosphate attachment site. 202 221 - T 25-04-2016 IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site RJP_RS04065 c416dbdcdf376468a3b96fce84774007 410 TIGRFAM TIGR02006 IscS: cysteine desulfurase IscS 8 410 2.2E-225 T 25-04-2016 IPR010240 Cysteine desulfurase IscS GO:0030170|GO:0031071|GO:0044571 KEGG: 00730+2.8.1.7|MetaCyc: PWY-6823|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7250|UniPathway: UPA00266 RJP_RS04065 c416dbdcdf376468a3b96fce84774007 410 PANTHER PTHR11601 11 410 3.5E-246 T 25-04-2016 RJP_RS02075 720f10358850f02ce2fbf7a9b588a263 487 Pfam PF00361 Proton-conducting membrane transporter 134 427 2.0E-45 T 25-04-2016 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit Reactome: REACT_6305 RJP_RS02075 720f10358850f02ce2fbf7a9b588a263 487 PANTHER PTHR22773:SF46 1 441 1.9E-95 T 25-04-2016 RJP_RS02075 720f10358850f02ce2fbf7a9b588a263 487 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 244 270 1.7E-13 T 25-04-2016 RJP_RS02075 720f10358850f02ce2fbf7a9b588a263 487 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 422 441 1.7E-13 T 25-04-2016 RJP_RS02075 720f10358850f02ce2fbf7a9b588a263 487 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 81 106 1.7E-13 T 25-04-2016 RJP_RS02075 720f10358850f02ce2fbf7a9b588a263 487 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 222 243 1.7E-13 T 25-04-2016 RJP_RS02075 720f10358850f02ce2fbf7a9b588a263 487 PANTHER PTHR22773 1 441 1.9E-95 T 25-04-2016 RJP_RS06720 173ada78fcb20871c3c18000d10f4d22 81 SUPERFAMILY SSF143120 1 62 9.02E-14 T 25-04-2016 RJP_RS06720 173ada78fcb20871c3c18000d10f4d22 81 TIGRFAM TIGR01552 phd_fam: prevent-host-death family protein 3 54 1.5E-20 T 25-04-2016 IPR006442 Type II toxin-antitoxin system, antitoxin Phd/YefM RJP_RS06720 173ada78fcb20871c3c18000d10f4d22 81 PANTHER PTHR33713:SF4 4 71 2.0E-12 T 25-04-2016 RJP_RS06720 173ada78fcb20871c3c18000d10f4d22 81 Pfam PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system 1 70 9.9E-16 T 25-04-2016 IPR006442 Type II toxin-antitoxin system, antitoxin Phd/YefM RJP_RS06720 173ada78fcb20871c3c18000d10f4d22 81 PANTHER PTHR33713 4 71 2.0E-12 T 25-04-2016 RJP_RS06720 173ada78fcb20871c3c18000d10f4d22 81 Gene3D G3DSA:3.40.1620.10 1 49 2.1E-21 T 25-04-2016 IPR006442 Type II toxin-antitoxin system, antitoxin Phd/YefM RJP_RS02300 36aa9402b5732007dd5078e75d4edf86 438 PANTHER PTHR23508 1 426 4.4E-46 T 25-04-2016 RJP_RS02300 36aa9402b5732007dd5078e75d4edf86 438 Gene3D G3DSA:1.20.1250.20 17 220 3.4E-15 T 25-04-2016 RJP_RS02300 36aa9402b5732007dd5078e75d4edf86 438 Gene3D G3DSA:1.20.1250.20 254 427 5.1E-4 T 25-04-2016 RJP_RS02300 36aa9402b5732007dd5078e75d4edf86 438 SUPERFAMILY SSF103473 15 431 1.83E-39 T 25-04-2016 IPR020846 Major facilitator superfamily domain RJP_RS02300 36aa9402b5732007dd5078e75d4edf86 438 Pfam PF07690 Major Facilitator Superfamily 24 384 3.4E-14 T 25-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 RJP_RS05665 fc69271210b4116e0f693980da92b9d4 321 Gene3D G3DSA:3.40.50.300 49 148 4.2E-4 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RJP_RS05665 fc69271210b4116e0f693980da92b9d4 321 Pfam PF02606 Tetraacyldisaccharide-1-P 4'-kinase 17 319 6.4E-76 T 25-04-2016 IPR003758 Tetraacyldisaccharide 4'-kinase GO:0005524|GO:0009029|GO:0009245 KEGG: 00030+2.7.1.13|KEGG: 00540+2.7.1.130|UniPathway: UPA00359 RJP_RS05665 fc69271210b4116e0f693980da92b9d4 321 PANTHER PTHR30160:SF13 5 317 2.7E-40 T 25-04-2016 RJP_RS05665 fc69271210b4116e0f693980da92b9d4 321 SUPERFAMILY SSF52540 46 149 8.24E-9 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RJP_RS05665 fc69271210b4116e0f693980da92b9d4 321 TIGRFAM TIGR00682 lpxK: tetraacyldisaccharide 4'-kinase 16 320 4.1E-109 T 25-04-2016 IPR003758 Tetraacyldisaccharide 4'-kinase GO:0005524|GO:0009029|GO:0009245 KEGG: 00030+2.7.1.13|KEGG: 00540+2.7.1.130|UniPathway: UPA00359 RJP_RS05665 fc69271210b4116e0f693980da92b9d4 321 Hamap MF_00409 Tetraacyldisaccharide 4'-kinase [lpxK]. 5 318 29.616 T 25-04-2016 IPR003758 Tetraacyldisaccharide 4'-kinase GO:0005524|GO:0009029|GO:0009245 KEGG: 00030+2.7.1.13|KEGG: 00540+2.7.1.130|UniPathway: UPA00359 RJP_RS05665 fc69271210b4116e0f693980da92b9d4 321 PANTHER PTHR30160 5 317 2.7E-40 T 25-04-2016 RJP_RS03655 0d9e49ab5a475684ae1e795cd71eead8 304 TIGRFAM TIGR00706 SppA_dom: signal peptide peptidase SppA, 36K type 54 259 3.8E-83 T 25-04-2016 IPR004635 Peptidase S49, SppA GO:0006508|GO:0008233 RJP_RS03655 0d9e49ab5a475684ae1e795cd71eead8 304 Gene3D G3DSA:3.90.226.10 187 261 6.0E-42 T 25-04-2016 IPR029045 ClpP/crotonase-like domain RJP_RS03655 0d9e49ab5a475684ae1e795cd71eead8 304 Gene3D G3DSA:3.90.226.10 38 149 6.0E-42 T 25-04-2016 IPR029045 ClpP/crotonase-like domain RJP_RS03655 0d9e49ab5a475684ae1e795cd71eead8 304 SUPERFAMILY SSF52096 46 157 3.78E-37 T 25-04-2016 IPR029045 ClpP/crotonase-like domain RJP_RS03655 0d9e49ab5a475684ae1e795cd71eead8 304 SUPERFAMILY SSF52096 186 248 3.78E-37 T 25-04-2016 IPR029045 ClpP/crotonase-like domain RJP_RS03655 0d9e49ab5a475684ae1e795cd71eead8 304 PANTHER PTHR33209 7 260 5.4E-66 T 25-04-2016 RJP_RS03655 0d9e49ab5a475684ae1e795cd71eead8 304 Pfam PF01343 Peptidase family S49 111 260 5.8E-46 T 25-04-2016 IPR002142 Peptidase S49 GO:0006508|GO:0008233 RJP_RS03820 370ade5ea5d85cb5b0292e14b1a77970 95 Gene3D G3DSA:3.40.50.150 18 95 1.4E-15 T 25-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RJP_RS03820 370ade5ea5d85cb5b0292e14b1a77970 95 Pfam PF02086 D12 class N6 adenine-specific DNA methyltransferase 2 91 1.0E-15 T 25-04-2016 IPR012327 D12 class N6 adenine-specific DNA methyltransferase GO:0009007|GO:0032775 RJP_RS03820 370ade5ea5d85cb5b0292e14b1a77970 95 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 43 49 - T 25-04-2016 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 RJP_RS03820 370ade5ea5d85cb5b0292e14b1a77970 95 PANTHER PTHR30481:SF3 4 94 1.2E-14 T 25-04-2016 RJP_RS03820 370ade5ea5d85cb5b0292e14b1a77970 95 SUPERFAMILY SSF53335 2 93 1.14E-18 T 25-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RJP_RS03820 370ade5ea5d85cb5b0292e14b1a77970 95 PANTHER PTHR30481 4 94 1.2E-14 T 25-04-2016 RJP_RS00605 3c006d4b24d48d7a292c720378596f75 465 PANTHER PTHR10160 4 465 1.1E-217 T 25-04-2016 RJP_RS00605 3c006d4b24d48d7a292c720378596f75 465 Gene3D G3DSA:3.40.50.1220 292 463 6.3E-84 T 25-04-2016 IPR029035 DHS-like NAD/FAD-binding domain RJP_RS00605 3c006d4b24d48d7a292c720378596f75 465 Pfam PF02233 NAD(P) transhydrogenase beta subunit 7 460 1.5E-184 T 25-04-2016 IPR012136 NADP transhydrogenase, beta subunit GO:0008750|GO:0016021|GO:0050661|GO:0055114 KEGG: 00760+1.6.1.2 RJP_RS00605 3c006d4b24d48d7a292c720378596f75 465 SUPERFAMILY SSF52467 294 464 1.96E-71 T 25-04-2016 IPR029035 DHS-like NAD/FAD-binding domain RJP_RS00605 3c006d4b24d48d7a292c720378596f75 465 PANTHER PTHR10160:SF24 4 465 1.1E-217 T 25-04-2016 RJP_RS00605 3c006d4b24d48d7a292c720378596f75 465 PIRSF PIRSF000204 1 464 4.5E-221 T 25-04-2016 IPR012136 NADP transhydrogenase, beta subunit GO:0008750|GO:0016021|GO:0050661|GO:0055114 KEGG: 00760+1.6.1.2 RJP_RS02525 e2e951bfbebe08b176310ab41ac37404 305 ProSitePatterns PS00943 UbiA prenyltransferase family signature. 73 95 - T 25-04-2016 IPR030470 UbiA prenyltransferase conserved site RJP_RS02525 e2e951bfbebe08b176310ab41ac37404 305 Hamap MF_00154 Protoheme IX farnesyltransferase [cyoE]. 19 300 19.301 T 25-04-2016 IPR006369 Protohaem IX farnesyltransferase GO:0008495|GO:0016021|GO:0048034 UniPathway: UPA00834 RJP_RS02525 e2e951bfbebe08b176310ab41ac37404 305 PANTHER PTHR11048:SF3 19 294 2.4E-74 T 25-04-2016 RJP_RS02525 e2e951bfbebe08b176310ab41ac37404 305 TIGRFAM TIGR01473 cyoE_ctaB: protoheme IX farnesyltransferase 21 296 1.5E-108 T 25-04-2016 IPR006369 Protohaem IX farnesyltransferase GO:0008495|GO:0016021|GO:0048034 UniPathway: UPA00834 RJP_RS02525 e2e951bfbebe08b176310ab41ac37404 305 PANTHER PTHR11048 19 294 2.4E-74 T 25-04-2016 RJP_RS02525 e2e951bfbebe08b176310ab41ac37404 305 Pfam PF01040 UbiA prenyltransferase family 36 284 7.3E-57 T 25-04-2016 IPR000537 UbiA prenyltransferase family GO:0004659|GO:0016021 RJP_RS05065 c8e50ac721a8ecfee2914712a33011ce 518 PRINTS PR00702 Acriflavin resistance protein family signature 405 429 5.2E-5 T 25-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 RJP_RS05065 c8e50ac721a8ecfee2914712a33011ce 518 PRINTS PR00702 Acriflavin resistance protein family signature 480 503 5.2E-5 T 25-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 RJP_RS05065 c8e50ac721a8ecfee2914712a33011ce 518 PRINTS PR00702 Acriflavin resistance protein family signature 377 398 5.2E-5 T 25-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 RJP_RS05065 c8e50ac721a8ecfee2914712a33011ce 518 PANTHER PTHR30081 234 518 3.2E-136 T 25-04-2016 RJP_RS05065 c8e50ac721a8ecfee2914712a33011ce 518 PANTHER PTHR30081 24 92 3.2E-136 T 25-04-2016 RJP_RS05065 c8e50ac721a8ecfee2914712a33011ce 518 TIGRFAM TIGR00916 2A0604s01: protein-export membrane protein, SecD/SecF family 266 496 5.4E-81 T 25-04-2016 IPR022645 Protein-export membrane protein SecD/SecF, bacterial RJP_RS05065 c8e50ac721a8ecfee2914712a33011ce 518 PANTHER PTHR30081 141 199 3.2E-136 T 25-04-2016 RJP_RS05065 c8e50ac721a8ecfee2914712a33011ce 518 TIGRFAM TIGR01129 secD: protein-export membrane protein SecD 42 503 8.7E-152 T 25-04-2016 IPR005791 Protein translocase subunit SecD GO:0006886|GO:0015450 RJP_RS05065 c8e50ac721a8ecfee2914712a33011ce 518 Gene3D G3DSA:1.20.1640.10 313 514 5.4E-29 T 25-04-2016 RJP_RS05065 c8e50ac721a8ecfee2914712a33011ce 518 PANTHER PTHR30081:SF1 234 518 3.2E-136 T 25-04-2016 RJP_RS05065 c8e50ac721a8ecfee2914712a33011ce 518 PANTHER PTHR30081:SF1 141 199 3.2E-136 T 25-04-2016 RJP_RS05065 c8e50ac721a8ecfee2914712a33011ce 518 PANTHER PTHR30081:SF1 24 92 3.2E-136 T 25-04-2016 RJP_RS05065 c8e50ac721a8ecfee2914712a33011ce 518 Pfam PF07549 SecD/SecF GG Motif 40 57 1.7E-4 T 25-04-2016 IPR022646 Protein-export membrane protein SecD/SecF/SecDF, conserved site RJP_RS05065 c8e50ac721a8ecfee2914712a33011ce 518 SUPERFAMILY SSF82866 313 511 1.44E-45 T 25-04-2016 RJP_RS05065 c8e50ac721a8ecfee2914712a33011ce 518 Hamap MF_01463_B Protein translocase subunit SecD [secD]. 2 516 42.049 T 25-04-2016 IPR005791 Protein translocase subunit SecD GO:0006886|GO:0015450 RJP_RS05065 c8e50ac721a8ecfee2914712a33011ce 518 Pfam PF02355 Protein export membrane protein 337 505 9.2E-18 T 25-04-2016 IPR022813 Protein-export membrane protein SecD/SecF, archaeal and bacterial RJP_RS06660 ed30af55a4766e2ee880177989de89db 435 SUPERFAMILY SSF48256 11 435 6.54E-162 T 25-04-2016 IPR002020 Citrate synthase GO:0046912 RJP_RS06660 ed30af55a4766e2ee880177989de89db 435 PIRSF PIRSF001369 43 435 4.4E-174 T 25-04-2016 IPR024176 Citrate synthase, bacterial-type UniPathway: UPA00223 RJP_RS06660 ed30af55a4766e2ee880177989de89db 435 Pfam PF00285 Citrate synthase, C-terminal domain 52 418 4.4E-132 T 25-04-2016 IPR002020 Citrate synthase GO:0046912 RJP_RS06660 ed30af55a4766e2ee880177989de89db 435 ProSitePatterns PS00480 Citrate synthase signature. 308 320 - T 25-04-2016 IPR019810 Citrate synthase active site GO:0006099|GO:0046912 UniPathway: UPA00223 RJP_RS06660 ed30af55a4766e2ee880177989de89db 435 TIGRFAM TIGR01798 cit_synth_I: citrate (Si)-synthase 21 429 1.9E-213 T 25-04-2016 IPR010953 Citrate synthase, type I GO:0004108|GO:0005737 UniPathway: UPA00223 RJP_RS06660 ed30af55a4766e2ee880177989de89db 435 PRINTS PR00143 Citrate synthase signature 224 239 5.0E-56 T 25-04-2016 IPR002020 Citrate synthase GO:0046912 RJP_RS06660 ed30af55a4766e2ee880177989de89db 435 PRINTS PR00143 Citrate synthase signature 170 183 5.0E-56 T 25-04-2016 IPR002020 Citrate synthase GO:0046912 RJP_RS06660 ed30af55a4766e2ee880177989de89db 435 PRINTS PR00143 Citrate synthase signature 366 382 5.0E-56 T 25-04-2016 IPR002020 Citrate synthase GO:0046912 RJP_RS06660 ed30af55a4766e2ee880177989de89db 435 PRINTS PR00143 Citrate synthase signature 386 400 5.0E-56 T 25-04-2016 IPR002020 Citrate synthase GO:0046912 RJP_RS06660 ed30af55a4766e2ee880177989de89db 435 PRINTS PR00143 Citrate synthase signature 246 274 5.0E-56 T 25-04-2016 IPR002020 Citrate synthase GO:0046912 RJP_RS06660 ed30af55a4766e2ee880177989de89db 435 PRINTS PR00143 Citrate synthase signature 301 321 5.0E-56 T 25-04-2016 IPR002020 Citrate synthase GO:0046912 RJP_RS06660 ed30af55a4766e2ee880177989de89db 435 Gene3D G3DSA:1.10.580.10 58 285 2.8E-95 T 25-04-2016 IPR016142 Citrate synthase-like, large alpha subdomain UniPathway: UPA00223 RJP_RS06660 ed30af55a4766e2ee880177989de89db 435 PANTHER PTHR11739 47 435 4.3E-194 T 25-04-2016 IPR002020 Citrate synthase GO:0046912 RJP_RS06660 ed30af55a4766e2ee880177989de89db 435 Gene3D G3DSA:1.10.230.10 286 380 1.1E-44 T 25-04-2016 IPR016143 Citrate synthase-like, small alpha subdomain RJP_RS05190 4097395d1fa9eef503fe4ba89a673081 71 TIGRFAM TIGR00012 L29: ribosomal protein uL29 13 64 1.2E-17 T 25-04-2016 IPR001854 Ribosomal protein L29 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RJP_RS05190 4097395d1fa9eef503fe4ba89a673081 71 ProSitePatterns PS00579 Ribosomal protein L29 signature. 44 58 - T 25-04-2016 IPR018254 Ribosomal protein L29, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 RJP_RS05190 4097395d1fa9eef503fe4ba89a673081 71 Pfam PF00831 Ribosomal L29 protein 10 65 7.0E-19 T 25-04-2016 IPR001854 Ribosomal protein L29 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RJP_RS05190 4097395d1fa9eef503fe4ba89a673081 71 PANTHER PTHR10916 15 66 1.2E-15 T 25-04-2016 RJP_RS05190 4097395d1fa9eef503fe4ba89a673081 71 Hamap MF_00374 50S ribosomal protein L29 [rpmC]. 1 65 15.0 T 25-04-2016 IPR001854 Ribosomal protein L29 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RJP_RS05190 4097395d1fa9eef503fe4ba89a673081 71 SUPERFAMILY SSF46561 10 67 2.09E-17 T 25-04-2016 IPR001854 Ribosomal protein L29 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RJP_RS05190 4097395d1fa9eef503fe4ba89a673081 71 Gene3D G3DSA:1.10.287.310 10 65 7.9E-21 T 25-04-2016 IPR001854 Ribosomal protein L29 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RJP_RS05580 e03e42e312f3709d37f5266c1470968e 415 PANTHER PTHR30489 10 415 1.8E-80 T 25-04-2016 RJP_RS05580 e03e42e312f3709d37f5266c1470968e 415 Pfam PF02687 FtsX-like permease family 276 408 6.7E-19 T 25-04-2016 IPR003838 ABC transporter permease protein domain GO:0016020 RJP_RS05580 e03e42e312f3709d37f5266c1470968e 415 TIGRFAM TIGR02212 lolCE: lipoprotein releasing system, transmembrane protein, LolC/E family 6 415 8.7E-154 T 25-04-2016 IPR011925 Lipoprotein-releasing system transmembrane protein LolC/E GO:0016021|GO:0042953|GO:0042954 RJP_RS05580 e03e42e312f3709d37f5266c1470968e 415 PANTHER PTHR30489:SF8 10 415 1.8E-80 T 25-04-2016 RJP_RS05580 e03e42e312f3709d37f5266c1470968e 415 Pfam PF12704 MacB-like periplasmic core domain 28 213 1.0E-18 T 25-04-2016 IPR025857 MacB-like periplasmic core domain RJP_RS04735 5aa8d838437f182fad3591ce0f15803b 108 Gene3D G3DSA:3.30.1460.30 4 101 2.8E-28 T 25-04-2016 IPR007076 TfoX, N-terminal RJP_RS04735 5aa8d838437f182fad3591ce0f15803b 108 Pfam PF04993 TfoX N-terminal domain 12 99 1.5E-23 T 25-04-2016 IPR007076 TfoX, N-terminal RJP_RS04735 5aa8d838437f182fad3591ce0f15803b 108 SUPERFAMILY SSF159894 4 101 1.73E-26 T 25-04-2016 RJP_RS04660 d0ee12ef638292151dae1a04ca98d7d9 222 SUPERFAMILY SSF52540 30 218 4.95E-11 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RJP_RS04660 d0ee12ef638292151dae1a04ca98d7d9 222 Gene3D G3DSA:3.40.50.300 6 145 2.9E-13 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RJP_RS04660 d0ee12ef638292151dae1a04ca98d7d9 222 PANTHER PTHR30050:SF5 100 215 6.7E-16 T 25-04-2016 RJP_RS04660 d0ee12ef638292151dae1a04ca98d7d9 222 Gene3D G3DSA:1.10.8.60 151 215 2.3E-14 T 25-04-2016 RJP_RS04660 d0ee12ef638292151dae1a04ca98d7d9 222 PANTHER PTHR30050 100 215 6.7E-16 T 25-04-2016 RJP_RS02585 e13a3d0474d24888a61f7b5a3cb7e711 82 ProDom PD004225 UPF0161 ALPHA-HEMOLYSIN YIDD UNCHARACTERIZED CYTOSOLIC PRECURSOR SIGNAL YTJA RNPA SIMILAR 16 68 4.0E-24 T 25-04-2016 IPR002696 Putative membrane protein insertion efficiency factor RJP_RS02585 e13a3d0474d24888a61f7b5a3cb7e711 82 Hamap MF_00386 Putative membrane protein insertion efficiency factor [yidD]. 1 69 24.562 T 25-04-2016 IPR002696 Putative membrane protein insertion efficiency factor RJP_RS02585 e13a3d0474d24888a61f7b5a3cb7e711 82 TIGRFAM TIGR00278 TIGR00278: putative membrane protein insertion efficiency factor 5 75 5.2E-29 T 25-04-2016 IPR002696 Putative membrane protein insertion efficiency factor RJP_RS02585 e13a3d0474d24888a61f7b5a3cb7e711 82 Pfam PF01809 Haemolytic domain 3 68 1.1E-29 T 25-04-2016 IPR002696 Putative membrane protein insertion efficiency factor RJP_RS02585 e13a3d0474d24888a61f7b5a3cb7e711 82 SMART SM01234 1 68 1.8E-43 T 25-04-2016 IPR002696 Putative membrane protein insertion efficiency factor RJP_RS02585 e13a3d0474d24888a61f7b5a3cb7e711 82 PANTHER PTHR33383 1 69 2.2E-36 T 25-04-2016 RJP_RS05925 d3e182a8efa5d533a7408e9c9fcc944e 281 PANTHER PTHR21091 1 229 6.0E-66 T 25-04-2016 RJP_RS05925 d3e182a8efa5d533a7408e9c9fcc944e 281 Hamap MF_01877 Ribosomal RNA small subunit methyltransferase I [rsmI]. 9 227 35.273 T 25-04-2016 IPR008189 rRNA small subunit methyltransferase I GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 RJP_RS05925 d3e182a8efa5d533a7408e9c9fcc944e 281 Gene3D G3DSA:3.40.1010.10 10 117 3.1E-14 T 25-04-2016 IPR014777 Tetrapyrrole methylase, subdomain 1 GO:0008152|GO:0008168 RJP_RS05925 d3e182a8efa5d533a7408e9c9fcc944e 281 PANTHER PTHR21091:SF18 1 229 6.0E-66 T 25-04-2016 RJP_RS05925 d3e182a8efa5d533a7408e9c9fcc944e 281 Pfam PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases 10 208 3.1E-22 T 25-04-2016 IPR000878 Tetrapyrrole methylase GO:0008152|GO:0008168 RJP_RS05925 d3e182a8efa5d533a7408e9c9fcc944e 281 PIRSF PIRSF005917 2 281 5.4E-89 T 25-04-2016 IPR008189 rRNA small subunit methyltransferase I GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 RJP_RS05925 d3e182a8efa5d533a7408e9c9fcc944e 281 ProSitePatterns PS01296 RsmI AdoMet-dependent methyltransferase protein family signature. 87 98 - T 25-04-2016 IPR018063 SAM-dependent methyltransferase RsmI, conserved site GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 RJP_RS05925 d3e182a8efa5d533a7408e9c9fcc944e 281 SUPERFAMILY SSF53790 8 225 2.36E-69 T 25-04-2016 IPR000878 Tetrapyrrole methylase GO:0008152|GO:0008168 RJP_RS05925 d3e182a8efa5d533a7408e9c9fcc944e 281 TIGRFAM TIGR00096 TIGR00096: 16S rRNA (cytidine(1402)-2'-O)-methyltransferase 10 276 1.8E-68 T 25-04-2016 IPR008189 rRNA small subunit methyltransferase I GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 RJP_RS05925 d3e182a8efa5d533a7408e9c9fcc944e 281 Gene3D G3DSA:3.30.950.10 118 228 4.8E-34 T 25-04-2016 IPR014776 Tetrapyrrole methylase, subdomain 2 GO:0008152|GO:0008168 RJP_RS03150 4c769735b0f6d2cba7e8b39b21558cf0 266 Pfam PF01323 DSBA-like thioredoxin domain 113 255 1.3E-22 T 25-04-2016 IPR001853 DSBA-like thioredoxin domain GO:0015035 RJP_RS03150 4c769735b0f6d2cba7e8b39b21558cf0 266 PANTHER PTHR13887:SF25 34 261 5.1E-44 T 25-04-2016 RJP_RS03150 4c769735b0f6d2cba7e8b39b21558cf0 266 PANTHER PTHR13887 34 261 5.1E-44 T 25-04-2016 RJP_RS03150 4c769735b0f6d2cba7e8b39b21558cf0 266 Gene3D G3DSA:3.40.30.10 98 260 1.6E-38 T 25-04-2016 IPR012336 Thioredoxin-like fold RJP_RS03150 4c769735b0f6d2cba7e8b39b21558cf0 266 SUPERFAMILY SSF52833 91 258 3.26E-32 T 25-04-2016 IPR012336 Thioredoxin-like fold RJP_RS03770 92ef0339718e2a8a7eb56b67858c193b 248 Gene3D G3DSA:3.90.550.10 5 246 1.5E-58 T 25-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases RJP_RS03770 92ef0339718e2a8a7eb56b67858c193b 248 PANTHER PTHR22572 9 243 1.6E-57 T 25-04-2016 RJP_RS03770 92ef0339718e2a8a7eb56b67858c193b 248 PANTHER PTHR22572:SF115 9 243 1.6E-57 T 25-04-2016 RJP_RS03770 92ef0339718e2a8a7eb56b67858c193b 248 SUPERFAMILY SSF53448 8 245 2.91E-50 T 25-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases RJP_RS03770 92ef0339718e2a8a7eb56b67858c193b 248 Pfam PF12804 MobA-like NTP transferase domain 11 141 2.3E-19 T 25-04-2016 IPR025877 MobA-like NTP transferase RJP_RS03045 3686a671cc061fd91a5305bec81d106e 125 Pfam PF02321 Outer membrane efflux protein 51 125 3.7E-9 T 25-04-2016 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 RJP_RS03045 3686a671cc061fd91a5305bec81d106e 125 PANTHER PTHR30203 1 125 4.2E-22 T 25-04-2016 RJP_RS03045 3686a671cc061fd91a5305bec81d106e 125 Gene3D G3DSA:2.20.200.10 42 124 8.4E-26 T 25-04-2016 RJP_RS03045 3686a671cc061fd91a5305bec81d106e 125 SUPERFAMILY SSF56954 2 124 7.59E-25 T 25-04-2016 RJP_RS03045 3686a671cc061fd91a5305bec81d106e 125 PANTHER PTHR30203:SF3 1 125 4.2E-22 T 25-04-2016 RJP_RS00590 3a232feaaee43145e240372fe821302e 237 SMART SM00862 145 221 4.1E-21 T 25-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 RJP_RS00590 3a232feaaee43145e240372fe821302e 237 Pfam PF00486 Transcriptional regulatory protein, C terminal 145 221 3.9E-21 T 25-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 RJP_RS00590 3a232feaaee43145e240372fe821302e 237 PANTHER PTHR26402:SF553 1 223 7.7E-109 T 25-04-2016 RJP_RS00590 3a232feaaee43145e240372fe821302e 237 PANTHER PTHR26402 1 223 7.7E-109 T 25-04-2016 RJP_RS00590 3a232feaaee43145e240372fe821302e 237 Pfam PF00072 Response regulator receiver domain 3 113 8.3E-22 T 25-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 RJP_RS00590 3a232feaaee43145e240372fe821302e 237 Gene3D G3DSA:1.10.10.10 123 223 3.7E-27 T 25-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RJP_RS00590 3a232feaaee43145e240372fe821302e 237 SMART SM00448 1 112 4.3E-34 T 25-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 RJP_RS00590 3a232feaaee43145e240372fe821302e 237 SUPERFAMILY SSF52172 1 179 4.68E-34 T 25-04-2016 IPR011006 CheY-like superfamily RJP_RS00590 3a232feaaee43145e240372fe821302e 237 Gene3D G3DSA:3.40.50.2300 1 121 3.6E-32 T 25-04-2016 RJP_RS03570 5f439ac8f16b9ed2add0605c5c78b0da 180 PANTHER PTHR34295:SF1 10 176 4.6E-24 T 25-04-2016 RJP_RS03570 5f439ac8f16b9ed2add0605c5c78b0da 180 PIRSF PIRSF016661 1 180 1.5E-45 T 25-04-2016 IPR003784 BioY protein GO:0005886|GO:0015225|GO:0015878 RJP_RS03570 5f439ac8f16b9ed2add0605c5c78b0da 180 Pfam PF02632 BioY family 36 176 2.4E-29 T 25-04-2016 IPR003784 BioY protein GO:0005886|GO:0015225|GO:0015878 RJP_RS03570 5f439ac8f16b9ed2add0605c5c78b0da 180 PANTHER PTHR34295 10 176 4.6E-24 T 25-04-2016 RJP_RS01260 cc514b2455c2c83058f3787e61d13fdb 545 PIRSF PIRSF003128 1 545 9.8E-182 T 25-04-2016 IPR004604 DNA recombination/repair protein RecN GO:0005524|GO:0006281|GO:0006310 RJP_RS01260 cc514b2455c2c83058f3787e61d13fdb 545 TIGRFAM TIGR00634 recN: DNA repair protein RecN 1 544 1.1E-136 T 25-04-2016 IPR004604 DNA recombination/repair protein RecN GO:0005524|GO:0006281|GO:0006310 RJP_RS01260 cc514b2455c2c83058f3787e61d13fdb 545 Gene3D G3DSA:3.40.50.300 1 204 9.9E-47 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RJP_RS01260 cc514b2455c2c83058f3787e61d13fdb 545 PANTHER PTHR11059 2 543 3.5E-127 T 25-04-2016 IPR004604 DNA recombination/repair protein RecN GO:0005524|GO:0006281|GO:0006310 RJP_RS01260 cc514b2455c2c83058f3787e61d13fdb 545 Gene3D G3DSA:3.40.50.300 423 507 5.3E-6 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RJP_RS01260 cc514b2455c2c83058f3787e61d13fdb 545 Pfam PF02463 RecF/RecN/SMC N terminal domain 4 501 5.4E-23 T 25-04-2016 IPR003395 RecF/RecN/SMC, N-terminal RJP_RS01260 cc514b2455c2c83058f3787e61d13fdb 545 SUPERFAMILY SSF52540 3 50 2.36E-29 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RJP_RS01260 cc514b2455c2c83058f3787e61d13fdb 545 SUPERFAMILY SSF52540 288 504 2.36E-29 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RJP_RS01260 cc514b2455c2c83058f3787e61d13fdb 545 SUPERFAMILY SSF52540 1 212 3.64E-47 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RJP_RS05160 e0cbed00c1d895cc78153b871735edc9 132 ProSitePatterns PS00053 Ribosomal protein S8 signature. 102 119 - T 25-04-2016 IPR000630 Ribosomal protein S8 GO:0003735|GO:0005840|GO:0006412 RJP_RS05160 e0cbed00c1d895cc78153b871735edc9 132 PANTHER PTHR11758:SF4 1 132 6.1E-40 T 25-04-2016 RJP_RS05160 e0cbed00c1d895cc78153b871735edc9 132 Hamap MF_01302_B 30S ribosomal protein S8 [rpsH]. 2 132 27.372 T 25-04-2016 IPR000630 Ribosomal protein S8 GO:0003735|GO:0005840|GO:0006412 RJP_RS05160 e0cbed00c1d895cc78153b871735edc9 132 PANTHER PTHR11758 1 132 6.1E-40 T 25-04-2016 IPR000630 Ribosomal protein S8 GO:0003735|GO:0005840|GO:0006412 RJP_RS05160 e0cbed00c1d895cc78153b871735edc9 132 Pfam PF00410 Ribosomal protein S8 5 132 1.1E-42 T 25-04-2016 IPR000630 Ribosomal protein S8 GO:0003735|GO:0005840|GO:0006412 RJP_RS05160 e0cbed00c1d895cc78153b871735edc9 132 Gene3D G3DSA:3.30.1490.10 76 132 5.4E-23 T 25-04-2016 RJP_RS05160 e0cbed00c1d895cc78153b871735edc9 132 SUPERFAMILY SSF56047 2 132 4.06E-43 T 25-04-2016 IPR000630 Ribosomal protein S8 GO:0003735|GO:0005840|GO:0006412 RJP_RS05160 e0cbed00c1d895cc78153b871735edc9 132 Gene3D G3DSA:3.30.1370.30 2 70 1.4E-23 T 25-04-2016 RJP_RS00850 7778ec62e16ab711d43231a4b611e485 418 SUPERFAMILY SSF142019 6 239 3.4E-83 T 25-04-2016 RJP_RS00850 7778ec62e16ab711d43231a4b611e485 418 Pfam PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region 332 413 4.5E-29 T 25-04-2016 IPR019575 NADH-ubiquinone oxidoreductase 51 kDa subunit, iron-sulphur binding domain GO:0051539 RJP_RS00850 7778ec62e16ab711d43231a4b611e485 418 SUPERFAMILY SSF142984 240 324 1.27E-25 T 25-04-2016 RJP_RS00850 7778ec62e16ab711d43231a4b611e485 418 ProSitePatterns PS00644 Respiratory-chain NADH dehydrogenase 51 Kd subunit signature 1. 166 181 - T 25-04-2016 IPR001949 NADH:ubiquinone oxidoreductase, 51kDa subunit, conserved site GO:0008137|GO:0010181|GO:0051539|GO:0055114 RJP_RS00850 7778ec62e16ab711d43231a4b611e485 418 PANTHER PTHR11780 2 416 8.0E-260 T 25-04-2016 RJP_RS00850 7778ec62e16ab711d43231a4b611e485 418 SUPERFAMILY SSF140490 325 416 1.12E-34 T 25-04-2016 RJP_RS00850 7778ec62e16ab711d43231a4b611e485 418 Pfam PF10531 SLBB domain 242 291 3.9E-9 T 25-04-2016 IPR019554 Soluble ligand binding domain RJP_RS00850 7778ec62e16ab711d43231a4b611e485 418 ProSitePatterns PS00645 Respiratory-chain NADH dehydrogenase 51 Kd subunit signature 2. 342 353 - T 25-04-2016 IPR001949 NADH:ubiquinone oxidoreductase, 51kDa subunit, conserved site GO:0008137|GO:0010181|GO:0051539|GO:0055114 RJP_RS00850 7778ec62e16ab711d43231a4b611e485 418 TIGRFAM TIGR01959 nuoF_fam: NADH oxidoreductase (quinone), F subunit 8 415 1.9E-205 T 25-04-2016 IPR011537 NADH ubiquinone oxidoreductase, F subunit GO:0010181|GO:0016651|GO:0051287|GO:0051539|GO:0055114 RJP_RS00850 7778ec62e16ab711d43231a4b611e485 418 Pfam PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit 47 218 5.2E-48 T 25-04-2016 IPR011538 NADH-ubiquinone oxidoreductase 51 kDa subunit, FMN-binding domain RJP_RS00850 7778ec62e16ab711d43231a4b611e485 418 SMART SM00928 329 374 2.6E-24 T 25-04-2016 IPR019575 NADH-ubiquinone oxidoreductase 51 kDa subunit, iron-sulphur binding domain GO:0051539 RJP_RS00965 74e849e015691d968ebbf8f957a2c9bf 192 Hamap MF_00948 Transcription termination/antitermination protein NusG [nusG]. 17 191 22.571 T 25-04-2016 IPR001062 Transcription antitermination protein, NusG GO:0032784 RJP_RS00965 74e849e015691d968ebbf8f957a2c9bf 192 Gene3D G3DSA:3.30.70.940 18 126 2.7E-37 T 25-04-2016 IPR006645 NusG, N-terminal GO:0006355 RJP_RS00965 74e849e015691d968ebbf8f957a2c9bf 192 SUPERFAMILY SSF82679 18 125 3.4E-33 T 25-04-2016 IPR006645 NusG, N-terminal GO:0006355 RJP_RS00965 74e849e015691d968ebbf8f957a2c9bf 192 ProSitePatterns PS01014 Transcription termination factor nusG signature. 174 183 - T 25-04-2016 IPR015869 Transcription antitermination protein, NusG, bacteria, conserved site RJP_RS00965 74e849e015691d968ebbf8f957a2c9bf 192 Gene3D G3DSA:2.30.30.30 132 190 5.0E-26 T 25-04-2016 IPR014722 Ribosomal protein L2 domain 2 RJP_RS00965 74e849e015691d968ebbf8f957a2c9bf 192 Pfam PF02357 Transcription termination factor nusG 18 121 3.8E-24 T 25-04-2016 IPR006645 NusG, N-terminal GO:0006355 RJP_RS00965 74e849e015691d968ebbf8f957a2c9bf 192 PRINTS PR00338 Transcription termination factor NUSG signature 72 84 1.9E-18 T 25-04-2016 IPR001062 Transcription antitermination protein, NusG GO:0032784 RJP_RS00965 74e849e015691d968ebbf8f957a2c9bf 192 PRINTS PR00338 Transcription termination factor NUSG signature 167 183 1.9E-18 T 25-04-2016 IPR001062 Transcription antitermination protein, NusG GO:0032784 RJP_RS00965 74e849e015691d968ebbf8f957a2c9bf 192 PRINTS PR00338 Transcription termination factor NUSG signature 149 164 1.9E-18 T 25-04-2016 IPR001062 Transcription antitermination protein, NusG GO:0032784 RJP_RS00965 74e849e015691d968ebbf8f957a2c9bf 192 SMART SM00739 137 164 1.7E-4 T 25-04-2016 IPR005824 KOW RJP_RS00965 74e849e015691d968ebbf8f957a2c9bf 192 Pfam PF00467 KOW motif 140 168 3.4E-7 T 25-04-2016 IPR005824 KOW RJP_RS00965 74e849e015691d968ebbf8f957a2c9bf 192 SUPERFAMILY SSF50104 137 190 6.02E-18 T 25-04-2016 IPR008991 Translation protein SH3-like domain RJP_RS00965 74e849e015691d968ebbf8f957a2c9bf 192 TIGRFAM TIGR00922 nusG: transcription termination/antitermination factor NusG 20 190 9.6E-68 T 25-04-2016 IPR001062 Transcription antitermination protein, NusG GO:0032784 RJP_RS00965 74e849e015691d968ebbf8f957a2c9bf 192 PANTHER PTHR30265 6 190 2.8E-58 T 25-04-2016 RJP_RS00965 74e849e015691d968ebbf8f957a2c9bf 192 SMART SM00738 17 125 1.4E-43 T 25-04-2016 IPR006645 NusG, N-terminal GO:0006355 RJP_RS02485 1981e7af8016eacfada03ffb1e81d340 331 SUPERFAMILY SSF111369 46 180 6.02E-17 T 25-04-2016 RJP_RS02485 1981e7af8016eacfada03ffb1e81d340 331 PANTHER PTHR30469 5 331 1.8E-36 T 25-04-2016 RJP_RS02485 1981e7af8016eacfada03ffb1e81d340 331 Gene3D G3DSA:2.40.50.100 61 88 1.4E-10 T 25-04-2016 RJP_RS02485 1981e7af8016eacfada03ffb1e81d340 331 Gene3D G3DSA:2.40.50.100 149 181 1.4E-10 T 25-04-2016 RJP_RS02485 1981e7af8016eacfada03ffb1e81d340 331 Pfam PF13533 Biotin-lipoyl like 64 88 9.1E-6 T 25-04-2016 RJP_RS02485 1981e7af8016eacfada03ffb1e81d340 331 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 30 328 1.5E-40 T 25-04-2016 IPR006143 RND efflux pump, membrane fusion protein GO:0016020|GO:0055085 RJP_RS06065 f08331c8eca3e83f3dbab9268c78ef5e 593 ProSitePatterns PS00211 ABC transporters family signature. 121 135 - T 25-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 RJP_RS06065 f08331c8eca3e83f3dbab9268c78ef5e 593 ProSitePatterns PS00211 ABC transporters family signature. 411 425 - T 25-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 RJP_RS06065 f08331c8eca3e83f3dbab9268c78ef5e 593 SUPERFAMILY SSF52540 276 497 6.61E-50 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RJP_RS06065 f08331c8eca3e83f3dbab9268c78ef5e 593 Pfam PF16326 ABC transporter C-terminal domain 524 592 1.2E-12 T 25-04-2016 IPR032524 ABC transporter Uup, C-terminal GO:0003677 RJP_RS06065 f08331c8eca3e83f3dbab9268c78ef5e 593 SMART SM00382 29 195 3.0E-10 T 25-04-2016 IPR003593 AAA+ ATPase domain RJP_RS06065 f08331c8eca3e83f3dbab9268c78ef5e 593 SMART SM00382 312 484 1.4E-12 T 25-04-2016 IPR003593 AAA+ ATPase domain RJP_RS06065 f08331c8eca3e83f3dbab9268c78ef5e 593 Pfam PF00005 ABC transporter 20 149 2.4E-23 T 25-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 RJP_RS06065 f08331c8eca3e83f3dbab9268c78ef5e 593 Pfam PF00005 ABC transporter 304 439 2.5E-23 T 25-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 RJP_RS06065 f08331c8eca3e83f3dbab9268c78ef5e 593 Gene3D G3DSA:3.40.50.300 286 497 6.7E-48 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RJP_RS06065 f08331c8eca3e83f3dbab9268c78ef5e 593 Gene3D G3DSA:3.40.50.300 7 206 1.4E-44 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RJP_RS06065 f08331c8eca3e83f3dbab9268c78ef5e 593 PANTHER PTHR19211 11 536 2.3E-146 T 25-04-2016 RJP_RS06065 f08331c8eca3e83f3dbab9268c78ef5e 593 SUPERFAMILY SSF52540 4 210 4.77E-45 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RJP_RS03125 4bbb1c1153e31794a626ad6e972438cb 479 Pfam PF00512 His Kinase A (phospho-acceptor) domain 273 329 2.2E-10 T 25-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RJP_RS03125 4bbb1c1153e31794a626ad6e972438cb 479 SUPERFAMILY SSF47384 258 330 1.94E-14 T 25-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RJP_RS03125 4bbb1c1153e31794a626ad6e972438cb 479 PANTHER PTHR24423 251 478 1.9E-47 T 25-04-2016 RJP_RS03125 4bbb1c1153e31794a626ad6e972438cb 479 PANTHER PTHR24423 59 84 1.9E-47 T 25-04-2016 RJP_RS03125 4bbb1c1153e31794a626ad6e972438cb 479 Gene3D G3DSA:1.10.287.130 263 317 1.1E-15 T 25-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RJP_RS03125 4bbb1c1153e31794a626ad6e972438cb 479 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 372 477 6.6E-16 T 25-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RJP_RS03125 4bbb1c1153e31794a626ad6e972438cb 479 SMART SM00388 272 330 1.1E-14 T 25-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RJP_RS03125 4bbb1c1153e31794a626ad6e972438cb 479 Gene3D G3DSA:3.30.565.10 318 478 2.7E-27 T 25-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RJP_RS03125 4bbb1c1153e31794a626ad6e972438cb 479 TIGRFAM TIGR03775 RPE3: rickettsial palindromic element RPE3 domain 11 52 1.1E-21 T 25-04-2016 IPR022437 Rickettsia palindromic element RPE3 RJP_RS03125 4bbb1c1153e31794a626ad6e972438cb 479 SUPERFAMILY SSF55874 322 478 1.23E-26 T 25-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RJP_RS03125 4bbb1c1153e31794a626ad6e972438cb 479 PRINTS PR00344 Bacterial sensor protein C-terminal signature 421 431 1.9E-11 T 25-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 RJP_RS03125 4bbb1c1153e31794a626ad6e972438cb 479 PRINTS PR00344 Bacterial sensor protein C-terminal signature 464 477 1.9E-11 T 25-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 RJP_RS03125 4bbb1c1153e31794a626ad6e972438cb 479 PRINTS PR00344 Bacterial sensor protein C-terminal signature 439 457 1.9E-11 T 25-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 RJP_RS03125 4bbb1c1153e31794a626ad6e972438cb 479 PRINTS PR00344 Bacterial sensor protein C-terminal signature 403 417 1.9E-11 T 25-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 RJP_RS03125 4bbb1c1153e31794a626ad6e972438cb 479 SMART SM00387 369 479 2.7E-22 T 25-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RJP_RS04760 411b9999faea5f5c28790310bc2bae5c 75 Pfam PF12895 Anaphase-promoting complex, cyclosome, subunit 3 2 50 2.3E-7 T 25-04-2016 RJP_RS04760 411b9999faea5f5c28790310bc2bae5c 75 Gene3D G3DSA:1.25.40.10 2 50 1.8E-8 T 25-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 RJP_RS04760 411b9999faea5f5c28790310bc2bae5c 75 SUPERFAMILY SSF48452 2 64 3.25E-9 T 25-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 RJP_RS00610 fcf3c225e5f511511d3ca7fa38ad07c1 244 Gene3D G3DSA:2.40.160.20 44 244 1.6E-27 T 25-04-2016 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 RJP_RS00610 fcf3c225e5f511511d3ca7fa38ad07c1 244 PANTHER PTHR36920 137 244 6.1E-14 T 25-04-2016 RJP_RS00610 fcf3c225e5f511511d3ca7fa38ad07c1 244 SUPERFAMILY SSF56925 54 244 8.89E-12 T 25-04-2016 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 RJP_RS00610 fcf3c225e5f511511d3ca7fa38ad07c1 244 PANTHER PTHR36920:SF1 137 244 6.1E-14 T 25-04-2016 RJP_RS00610 fcf3c225e5f511511d3ca7fa38ad07c1 244 Pfam PF03922 OmpW family 44 244 3.1E-55 T 25-04-2016 IPR005618 Outer membrane protein, OmpW GO:0019867 RJP_RS02065 5abc8aa55f35116567b1b2d4d7de8faa 134 SUPERFAMILY SSF88723 1 130 2.47E-29 T 25-04-2016 IPR029060 PIN domain-like RJP_RS02065 5abc8aa55f35116567b1b2d4d7de8faa 134 PANTHER PTHR33653 1 127 4.9E-20 T 25-04-2016 RJP_RS02065 5abc8aa55f35116567b1b2d4d7de8faa 134 Hamap MF_00265 tRNA(fMet)-specific endonuclease VapC [vapC]. 3 129 9.727 T 25-04-2016 IPR022907 VapC family GO:0004540 RJP_RS02065 5abc8aa55f35116567b1b2d4d7de8faa 134 Gene3D G3DSA:3.40.50.1010 2 131 8.3E-37 T 25-04-2016 IPR029060 PIN domain-like RJP_RS02065 5abc8aa55f35116567b1b2d4d7de8faa 134 PANTHER PTHR33653:SF2 1 127 4.9E-20 T 25-04-2016 RJP_RS02065 5abc8aa55f35116567b1b2d4d7de8faa 134 Pfam PF01850 PIN domain 4 123 4.4E-12 T 25-04-2016 IPR002716 PIN domain RJP_RS06085 dfb0a8f1b697d1cdfac8effd8c5858e7 229 Gene3D G3DSA:3.40.50.300 39 84 6.9E-5 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RJP_RS06085 dfb0a8f1b697d1cdfac8effd8c5858e7 229 Gene3D G3DSA:3.40.50.300 126 226 5.4E-48 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RJP_RS06085 dfb0a8f1b697d1cdfac8effd8c5858e7 229 Pfam PF00625 Guanylate kinase 46 223 5.4E-50 T 25-04-2016 IPR008145 Guanylate kinase/L-type calcium channel beta subunit RJP_RS06085 dfb0a8f1b697d1cdfac8effd8c5858e7 229 SUPERFAMILY SSF52540 42 227 7.64E-68 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RJP_RS06085 dfb0a8f1b697d1cdfac8effd8c5858e7 229 PANTHER PTHR23117:SF13 40 227 1.4E-83 T 25-04-2016 RJP_RS06085 dfb0a8f1b697d1cdfac8effd8c5858e7 229 PANTHER PTHR23117 40 227 1.4E-83 T 25-04-2016 RJP_RS06085 dfb0a8f1b697d1cdfac8effd8c5858e7 229 Gene3D G3DSA:3.30.63.10 85 125 1.6E-23 T 25-04-2016 RJP_RS06085 dfb0a8f1b697d1cdfac8effd8c5858e7 229 TIGRFAM TIGR01045 RPE1: rickettsial palindromic element RPE1 domain 7 39 1.8E-8 T 25-04-2016 IPR005728 Rickettsial palindromic element RJP_RS06085 dfb0a8f1b697d1cdfac8effd8c5858e7 229 ProSitePatterns PS00856 Guanylate kinase-like signature. 78 95 - T 25-04-2016 IPR020590 Guanylate kinase, conserved site KEGG: 00230+2.7.4.8|MetaCyc: PWY-7221 RJP_RS06085 dfb0a8f1b697d1cdfac8effd8c5858e7 229 SMART SM00072 43 225 2.5E-61 T 25-04-2016 IPR008145 Guanylate kinase/L-type calcium channel beta subunit RJP_RS06085 dfb0a8f1b697d1cdfac8effd8c5858e7 229 TIGRFAM TIGR03263 guanyl_kin: guanylate kinase 45 222 5.2E-73 T 25-04-2016 IPR017665 Guanylate kinase GO:0004385|GO:0006163 KEGG: 00230+2.7.4.8|MetaCyc: PWY-7221 RJP_RS06085 dfb0a8f1b697d1cdfac8effd8c5858e7 229 Hamap MF_00328 Guanylate kinase [gmk]. 42 225 36.709 T 25-04-2016 IPR017665 Guanylate kinase GO:0004385|GO:0006163 KEGG: 00230+2.7.4.8|MetaCyc: PWY-7221 RJP_RS03510 dec0d9a91ecb84081057c269c88091c0 511 TIGRFAM TIGR00769 AAA: ADP/ATP carrier protein family 29 503 8.8E-134 T 25-04-2016 IPR004667 ADP/ATP carrier protein GO:0005471|GO:0005524|GO:0006810|GO:0016021 RJP_RS03510 dec0d9a91ecb84081057c269c88091c0 511 Pfam PF03219 TLC ATP/ADP transporter 14 503 3.0E-192 T 25-04-2016 IPR004667 ADP/ATP carrier protein GO:0005471|GO:0005524|GO:0006810|GO:0016021 RJP_RS03510 dec0d9a91ecb84081057c269c88091c0 511 PANTHER PTHR31187:SF1 21 508 7.5E-112 T 25-04-2016 RJP_RS03510 dec0d9a91ecb84081057c269c88091c0 511 PANTHER PTHR31187 21 508 7.5E-112 T 25-04-2016 IPR004667 ADP/ATP carrier protein GO:0005471|GO:0005524|GO:0006810|GO:0016021 RJP_RS02770 a49f640f1ac40b9ac3c016bcf6f877cc 314 Hamap MF_00487 Malate dehydrogenase [mdh]. 5 314 42.94 T 25-04-2016 IPR011275 Malate dehydrogenase, type 3 GO:0016616|GO:0055114 KEGG: 00020+1.1.1.37|KEGG: 00270+1.1.1.37|KEGG: 00620+1.1.1.37|KEGG: 00630+1.1.1.37|KEGG: 00680+1.1.1.37|KEGG: 00710+1.1.1.37|KEGG: 00720+1.1.1.37|MetaCyc: PWY-1622|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7115|MetaCyc: PWY-7383 RJP_RS02770 a49f640f1ac40b9ac3c016bcf6f877cc 314 PANTHER PTHR11540:SF16 2 311 8.2E-156 T 25-04-2016 RJP_RS02770 a49f640f1ac40b9ac3c016bcf6f877cc 314 PANTHER PTHR11540 2 311 8.2E-156 T 25-04-2016 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 RJP_RS02770 a49f640f1ac40b9ac3c016bcf6f877cc 314 PRINTS PR00086 L-lactate dehydrogenase signature 142 160 3.5E-30 T 25-04-2016 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 RJP_RS02770 a49f640f1ac40b9ac3c016bcf6f877cc 314 PRINTS PR00086 L-lactate dehydrogenase signature 6 30 3.5E-30 T 25-04-2016 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 RJP_RS02770 a49f640f1ac40b9ac3c016bcf6f877cc 314 PRINTS PR00086 L-lactate dehydrogenase signature 172 185 3.5E-30 T 25-04-2016 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 RJP_RS02770 a49f640f1ac40b9ac3c016bcf6f877cc 314 PRINTS PR00086 L-lactate dehydrogenase signature 118 138 3.5E-30 T 25-04-2016 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 RJP_RS02770 a49f640f1ac40b9ac3c016bcf6f877cc 314 PRINTS PR00086 L-lactate dehydrogenase signature 30 54 3.5E-30 T 25-04-2016 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 RJP_RS02770 a49f640f1ac40b9ac3c016bcf6f877cc 314 Gene3D G3DSA:3.90.110.10 146 314 8.1E-57 T 25-04-2016 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal GO:0003824|GO:0005975|GO:0016616|GO:0055114 RJP_RS02770 a49f640f1ac40b9ac3c016bcf6f877cc 314 SUPERFAMILY SSF51735 6 145 6.08E-50 T 25-04-2016 IPR016040 NAD(P)-binding domain RJP_RS02770 a49f640f1ac40b9ac3c016bcf6f877cc 314 SUPERFAMILY SSF56327 145 313 3.03E-53 T 25-04-2016 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal GO:0003824|GO:0005975|GO:0016616|GO:0055114 RJP_RS02770 a49f640f1ac40b9ac3c016bcf6f877cc 314 TIGRFAM TIGR01763 MalateDH_bact: malate dehydrogenase, NAD-dependent 6 312 2.1E-126 T 25-04-2016 IPR011275 Malate dehydrogenase, type 3 GO:0016616|GO:0055114 KEGG: 00020+1.1.1.37|KEGG: 00270+1.1.1.37|KEGG: 00620+1.1.1.37|KEGG: 00630+1.1.1.37|KEGG: 00680+1.1.1.37|KEGG: 00710+1.1.1.37|KEGG: 00720+1.1.1.37|MetaCyc: PWY-1622|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7115|MetaCyc: PWY-7383 RJP_RS02770 a49f640f1ac40b9ac3c016bcf6f877cc 314 Pfam PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain 148 313 3.1E-30 T 25-04-2016 IPR022383 Lactate/malate dehydrogenase, C-terminal GO:0016616|GO:0055114 RJP_RS02770 a49f640f1ac40b9ac3c016bcf6f877cc 314 Pfam PF00056 lactate/malate dehydrogenase, NAD binding domain 6 144 1.9E-42 T 25-04-2016 IPR001236 Lactate/malate dehydrogenase, N-terminal GO:0016491|GO:0055114 RJP_RS02770 a49f640f1ac40b9ac3c016bcf6f877cc 314 PIRSF PIRSF000102 1 314 6.9E-106 T 25-04-2016 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 RJP_RS02770 a49f640f1ac40b9ac3c016bcf6f877cc 314 Gene3D G3DSA:3.40.50.720 2 145 7.0E-53 T 25-04-2016 IPR016040 NAD(P)-binding domain RJP_RS00030 95cd503802dca5b598faaff34898e35a 258 PANTHER PTHR30413 9 258 1.9E-15 T 25-04-2016 IPR000412 ABC-2 transporter GO:0006810|GO:0016020 RJP_RS00030 95cd503802dca5b598faaff34898e35a 258 Pfam PF01061 ABC-2 type transporter 14 216 4.1E-10 T 25-04-2016 IPR013525 ABC-2 type transporter GO:0016020 RJP_RS06670 df2eb070d60d8ccdaa504981d8260dd2 261 PANTHER PTHR33693:SF1 65 259 4.8E-62 T 25-04-2016 RJP_RS06670 df2eb070d60d8ccdaa504981d8260dd2 261 SMART SM00987 95 248 8.4E-39 T 25-04-2016 RJP_RS06670 df2eb070d60d8ccdaa504981d8260dd2 261 Gene3D G3DSA:3.40.470.10 70 255 3.4E-61 T 25-04-2016 IPR005122 Uracil-DNA glycosylase-like RJP_RS06670 df2eb070d60d8ccdaa504981d8260dd2 261 SMART SM00986 95 248 8.4E-39 T 25-04-2016 IPR005122 Uracil-DNA glycosylase-like RJP_RS06670 df2eb070d60d8ccdaa504981d8260dd2 261 TIGRFAM TIGR00758 UDG_fam4: uracil-DNA glycosylase, family 4 82 255 3.9E-74 T 25-04-2016 IPR005273 Uracil-DNA glycosylase, family 4 domain RJP_RS06670 df2eb070d60d8ccdaa504981d8260dd2 261 PANTHER PTHR33693 65 259 4.8E-62 T 25-04-2016 RJP_RS06670 df2eb070d60d8ccdaa504981d8260dd2 261 SUPERFAMILY SSF52141 66 254 2.13E-56 T 25-04-2016 IPR005122 Uracil-DNA glycosylase-like RJP_RS06670 df2eb070d60d8ccdaa504981d8260dd2 261 Pfam PF03167 Uracil DNA glycosylase superfamily 95 247 1.6E-40 T 25-04-2016 IPR005122 Uracil-DNA glycosylase-like RJP_RS03115 c79c81662bfd111a3139da4061604999 230 PANTHER PTHR13773 46 226 6.2E-37 T 25-04-2016 RJP_RS03115 c79c81662bfd111a3139da4061604999 230 ProSitePatterns PS01315 Phosphatidate cytidylyltransferase signature. 188 214 - T 25-04-2016 IPR000374 Phosphatidate cytidylyltransferase GO:0016020|GO:0016772 KEGG: 00564+2.7.7.41|KEGG: 04070+2.7.7.41|MetaCyc: PWY-5667|MetaCyc: PWY-5981|UniPathway: UPA00557 RJP_RS03115 c79c81662bfd111a3139da4061604999 230 Pfam PF01148 Cytidylyltransferase family 68 226 4.7E-41 T 25-04-2016 RJP_RS04165 4c61a119625c454e034b980446d6759e 494 Pfam PF03796 DnaB-like helicase C terminal domain 204 485 3.8E-101 T 25-04-2016 IPR007694 DNA helicase, DnaB-like, C-terminal GO:0003678|GO:0005524|GO:0006260 RJP_RS04165 4c61a119625c454e034b980446d6759e 494 Pfam PF00772 DnaB-like helicase N terminal domain 26 127 1.2E-25 T 25-04-2016 IPR007693 DNA helicase, DnaB-like, N-terminal GO:0003678|GO:0005524|GO:0006260 RJP_RS04165 4c61a119625c454e034b980446d6759e 494 TIGRFAM TIGR00665 DnaB: replicative DNA helicase 26 487 1.6E-153 T 25-04-2016 IPR007692 DNA helicase, DnaB type GO:0003677|GO:0003678|GO:0005524|GO:0006260 RJP_RS04165 4c61a119625c454e034b980446d6759e 494 Gene3D G3DSA:3.40.50.300 191 487 3.8E-91 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RJP_RS04165 4c61a119625c454e034b980446d6759e 494 PANTHER PTHR30153 448 494 4.5E-162 T 25-04-2016 RJP_RS04165 4c61a119625c454e034b980446d6759e 494 PANTHER PTHR30153 10 430 4.5E-162 T 25-04-2016 RJP_RS04165 4c61a119625c454e034b980446d6759e 494 SUPERFAMILY SSF52540 203 478 7.16E-46 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RJP_RS04165 4c61a119625c454e034b980446d6759e 494 SUPERFAMILY SSF48024 24 136 1.57E-29 T 25-04-2016 IPR007693 DNA helicase, DnaB-like, N-terminal GO:0003678|GO:0005524|GO:0006260 RJP_RS04165 4c61a119625c454e034b980446d6759e 494 Gene3D G3DSA:1.10.860.10 26 127 1.6E-24 T 25-04-2016 IPR016136 DNA helicase DnaB, N-terminal/DNA primase DnaG, C-terminal RJP_RS03795 20eeb83337433e10eaea9fc604c7ffd1 280 SUPERFAMILY SSF53955 51 122 1.13E-16 T 25-04-2016 IPR023346 Lysozyme-like domain RJP_RS03795 20eeb83337433e10eaea9fc604c7ffd1 280 SUPERFAMILY SSF53955 152 207 1.13E-16 T 25-04-2016 IPR023346 Lysozyme-like domain RJP_RS03795 20eeb83337433e10eaea9fc604c7ffd1 280 Gene3D G3DSA:1.10.530.10 86 207 3.5E-12 T 25-04-2016 RJP_RS03795 20eeb83337433e10eaea9fc604c7ffd1 280 Pfam PF01464 Transglycosylase SLT domain 86 218 6.5E-11 T 25-04-2016 IPR008258 Transglycosylase SLT domain 1 RJP_RS04040 022daab0d84b7e7820a751c2d0e0566d 651 Pfam PF16189 Creatinase/Prolidase N-terminal domain 133 347 5.5E-31 T 25-04-2016 RJP_RS04040 022daab0d84b7e7820a751c2d0e0566d 651 Gene3D G3DSA:3.90.230.10 341 615 1.9E-61 T 25-04-2016 IPR000994 Peptidase M24, structural domain RJP_RS04040 022daab0d84b7e7820a751c2d0e0566d 651 Pfam PF16188 C-terminal region of peptidase_M24 589 644 1.1E-13 T 25-04-2016 IPR032416 Peptidase M24, C-terminal domain RJP_RS04040 022daab0d84b7e7820a751c2d0e0566d 651 Pfam PF00557 Metallopeptidase family M24 398 585 3.7E-44 T 25-04-2016 IPR000994 Peptidase M24, structural domain RJP_RS04040 022daab0d84b7e7820a751c2d0e0566d 651 SUPERFAMILY SSF55920 398 613 4.32E-52 T 25-04-2016 IPR000994 Peptidase M24, structural domain RJP_RS04040 022daab0d84b7e7820a751c2d0e0566d 651 Gene3D G3DSA:3.40.350.10 3 121 3.9E-18 T 25-04-2016 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal RJP_RS04040 022daab0d84b7e7820a751c2d0e0566d 651 TIGRFAM TIGR01045 RPE1: rickettsial palindromic element RPE1 domain 261 307 2.3E-22 T 25-04-2016 IPR005728 Rickettsial palindromic element RJP_RS04040 022daab0d84b7e7820a751c2d0e0566d 651 SUPERFAMILY SSF53092 9 122 2.27E-13 T 25-04-2016 IPR028980 Creatinase/Aminopeptidase P, N-terminal RJP_RS04040 022daab0d84b7e7820a751c2d0e0566d 651 Pfam PF01321 Creatinase/Prolidase N-terminal domain 5 118 2.7E-12 T 25-04-2016 IPR000587 Creatinase, N-terminal GO:0016787 RJP_RS04040 022daab0d84b7e7820a751c2d0e0566d 651 PANTHER PTHR10804 5 163 2.7E-233 T 25-04-2016 RJP_RS04040 022daab0d84b7e7820a751c2d0e0566d 651 PANTHER PTHR10804 323 369 2.7E-233 T 25-04-2016 RJP_RS04040 022daab0d84b7e7820a751c2d0e0566d 651 PANTHER PTHR10804 396 646 2.7E-233 T 25-04-2016 RJP_RS04040 022daab0d84b7e7820a751c2d0e0566d 651 PANTHER PTHR10804:SF105 5 163 2.7E-233 T 25-04-2016 RJP_RS04040 022daab0d84b7e7820a751c2d0e0566d 651 PANTHER PTHR10804:SF105 323 369 2.7E-233 T 25-04-2016 RJP_RS04040 022daab0d84b7e7820a751c2d0e0566d 651 PANTHER PTHR10804:SF105 396 646 2.7E-233 T 25-04-2016 RJP_RS04200 f71aec46a8ef3547f6e053e60626ca24 245 TIGRFAM TIGR01045 RPE1: rickettsial palindromic element RPE1 domain 117 163 2.8E-23 T 25-04-2016 IPR005728 Rickettsial palindromic element RJP_RS04200 f71aec46a8ef3547f6e053e60626ca24 245 PANTHER PTHR18895:SF60 2 109 8.3E-18 T 25-04-2016 RJP_RS04200 f71aec46a8ef3547f6e053e60626ca24 245 PANTHER PTHR18895:SF60 162 230 8.3E-18 T 25-04-2016 RJP_RS04200 f71aec46a8ef3547f6e053e60626ca24 245 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 171 177 - T 25-04-2016 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 RJP_RS04200 f71aec46a8ef3547f6e053e60626ca24 245 PANTHER PTHR18895 2 109 8.3E-18 T 25-04-2016 RJP_RS04200 f71aec46a8ef3547f6e053e60626ca24 245 Pfam PF03602 Conserved hypothetical protein 95 2 114 1.5E-21 T 25-04-2016 RJP_RS04200 f71aec46a8ef3547f6e053e60626ca24 245 Pfam PF03602 Conserved hypothetical protein 95 165 232 7.5E-14 T 25-04-2016 RJP_RS04200 f71aec46a8ef3547f6e053e60626ca24 245 PANTHER PTHR18895 162 230 8.3E-18 T 25-04-2016 RJP_RS04200 f71aec46a8ef3547f6e053e60626ca24 245 Gene3D G3DSA:3.40.50.150 170 234 1.4E-49 T 25-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RJP_RS04200 f71aec46a8ef3547f6e053e60626ca24 245 Gene3D G3DSA:3.40.50.150 2 121 1.4E-49 T 25-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RJP_RS04200 f71aec46a8ef3547f6e053e60626ca24 245 SUPERFAMILY SSF53335 2 116 1.2E-34 T 25-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RJP_RS04200 f71aec46a8ef3547f6e053e60626ca24 245 SUPERFAMILY SSF53335 162 231 1.2E-34 T 25-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RJP_RS00365 e55a04bc397e433e142914481f077a30 128 Gene3D G3DSA:1.10.10.10 29 127 1.3E-25 T 25-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RJP_RS00365 e55a04bc397e433e142914481f077a30 128 SMART SM00862 51 124 6.9E-15 T 25-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 RJP_RS00365 e55a04bc397e433e142914481f077a30 128 SUPERFAMILY SSF46894 28 125 1.5E-23 T 25-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 RJP_RS00365 e55a04bc397e433e142914481f077a30 128 PANTHER PTHR26402:SF531 6 125 5.8E-25 T 25-04-2016 RJP_RS00365 e55a04bc397e433e142914481f077a30 128 Pfam PF00486 Transcriptional regulatory protein, C terminal 53 124 2.5E-19 T 25-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 RJP_RS00365 e55a04bc397e433e142914481f077a30 128 PANTHER PTHR26402 6 125 5.8E-25 T 25-04-2016 RJP_RS06375 361d64423a2e0a243e3cf10dc99e2584 575 TIGRFAM TIGR00932 2a37: transporter, monovalent cation:proton antiporter-2 (CPA2) family 14 286 2.4E-71 T 25-04-2016 IPR004771 K+/H+ exchanger GO:0006812|GO:0008324|GO:0016021 RJP_RS06375 361d64423a2e0a243e3cf10dc99e2584 575 Pfam PF02254 TrkA-N domain 409 522 3.5E-18 T 25-04-2016 IPR003148 Regulator of K+ conductance, N-terminal GO:0006813 RJP_RS06375 361d64423a2e0a243e3cf10dc99e2584 575 Gene3D G3DSA:3.40.50.720 404 537 4.7E-28 T 25-04-2016 IPR016040 NAD(P)-binding domain RJP_RS06375 361d64423a2e0a243e3cf10dc99e2584 575 Pfam PF00999 Sodium/hydrogen exchanger family 10 375 4.5E-63 T 25-04-2016 IPR006153 Cation/H+ exchanger GO:0006812|GO:0015299|GO:0016021|GO:0055085 RJP_RS06375 361d64423a2e0a243e3cf10dc99e2584 575 SUPERFAMILY SSF51735 405 546 5.09E-27 T 25-04-2016 IPR016040 NAD(P)-binding domain RJP_RS06375 361d64423a2e0a243e3cf10dc99e2584 575 PANTHER PTHR16254 1 563 1.5E-166 T 25-04-2016 RJP_RS06375 361d64423a2e0a243e3cf10dc99e2584 575 PANTHER PTHR16254:SF6 1 563 1.5E-166 T 25-04-2016 RJP_RS00810 68c14ba425db98c6118a0e1a46d41621 349 SUPERFAMILY SSF53659 46 337 2.06E-54 T 25-04-2016 RJP_RS00810 68c14ba425db98c6118a0e1a46d41621 349 PANTHER PTHR23406 72 313 1.2E-14 T 25-04-2016 RJP_RS00810 68c14ba425db98c6118a0e1a46d41621 349 PANTHER PTHR23406:SF1 72 313 1.2E-14 T 25-04-2016 RJP_RS00810 68c14ba425db98c6118a0e1a46d41621 349 Pfam PF01515 Phosphate acetyl/butaryl transferase 117 323 1.1E-34 T 25-04-2016 IPR002505 Phosphate acetyl/butaryl transferase GO:0008152|GO:0016746 KEGG: 00430+2.3.1.8|KEGG: 00620+2.3.1.8|KEGG: 00640+2.3.1.8|KEGG: 00680+2.3.1.8|KEGG: 00720+2.3.1.8|MetaCyc: PWY-1281|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|MetaCyc: PWY-6637|UniPathway: UPA00340 RJP_RS00810 68c14ba425db98c6118a0e1a46d41621 349 Gene3D G3DSA:3.40.50.10750 150 309 1.5E-43 T 25-04-2016 RJP_RS00810 68c14ba425db98c6118a0e1a46d41621 349 PIRSF PIRSF000428 37 340 2.4E-88 T 25-04-2016 IPR012147 Phosphate acetyl/butyryltransferase GO:0016746 KEGG: 00430+2.3.1.8|KEGG: 00620+2.3.1.8|KEGG: 00640+2.3.1.8|KEGG: 00680+2.3.1.8|KEGG: 00720+2.3.1.8|MetaCyc: PWY-1281|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|MetaCyc: PWY-6637|UniPathway: UPA00340 RJP_RS04990 b5dc6470c434300b582a2c85fd116dc8 549 SMART SM00246 438 455 3.0 T 25-04-2016 IPR003124 WH2 domain GO:0003779 RJP_RS04990 b5dc6470c434300b582a2c85fd116dc8 549 SMART SM00246 411 428 28.0 T 25-04-2016 IPR003124 WH2 domain GO:0003779 RJP_RS00385 aa0eb3aa7af74ab3d5f09e0d5e3a9b8b 535 SUPERFAMILY SSF52402 4 201 1.32E-45 T 25-04-2016 RJP_RS00385 aa0eb3aa7af74ab3d5f09e0d5e3a9b8b 535 Pfam PF01171 PP-loop family 22 199 1.7E-57 T 25-04-2016 IPR011063 tRNA(Ile)-lysidine/2-thiocytidine synthase, N-terminal RJP_RS00385 aa0eb3aa7af74ab3d5f09e0d5e3a9b8b 535 PANTHER PTHR11807:SF2 19 199 2.4E-51 T 25-04-2016 IPR012094 tRNA(Ile)-lysidine synthase GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 RJP_RS00385 aa0eb3aa7af74ab3d5f09e0d5e3a9b8b 535 TIGRFAM TIGR02432 lysidine_TilS_N: tRNA(Ile)-lysidine synthetase 21 202 1.3E-54 T 25-04-2016 IPR012795 tRNA(Ile)-lysidine synthase, N-terminal GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 RJP_RS00385 aa0eb3aa7af74ab3d5f09e0d5e3a9b8b 535 PANTHER PTHR11807 19 199 2.4E-51 T 25-04-2016 RJP_RS00385 aa0eb3aa7af74ab3d5f09e0d5e3a9b8b 535 Gene3D G3DSA:3.40.50.620 3 179 4.3E-14 T 25-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold RJP_RS00385 aa0eb3aa7af74ab3d5f09e0d5e3a9b8b 535 Hamap MF_01161 tRNA(Ile)-lysidine synthase [tilS]. 3 325 19.203 T 25-04-2016 IPR012094 tRNA(Ile)-lysidine synthase GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 RJP_RS00385 aa0eb3aa7af74ab3d5f09e0d5e3a9b8b 535 TIGRFAM TIGR01045 RPE1: rickettsial palindromic element RPE1 domain 209 238 3.5E-14 T 25-04-2016 IPR005728 Rickettsial palindromic element RJP_RS02720 5f2f0cd639d45b2ef0fc2f92bd137a0d 767 Gene3D G3DSA:3.40.50.10380 10 163 1.5E-49 T 25-04-2016 IPR012301 Malic enzyme, N-terminal domain GO:0004471|GO:0055114 RJP_RS02720 5f2f0cd639d45b2ef0fc2f92bd137a0d 767 SUPERFAMILY SSF53659 433 763 7.81E-63 T 25-04-2016 RJP_RS02720 5f2f0cd639d45b2ef0fc2f92bd137a0d 767 PANTHER PTHR23406:SF23 1 457 6.2E-165 T 25-04-2016 RJP_RS02720 5f2f0cd639d45b2ef0fc2f92bd137a0d 767 SMART SM00919 166 403 8.7E-135 T 25-04-2016 IPR012302 Malic enzyme, NAD-binding GO:0004471|GO:0051287|GO:0055114 RJP_RS02720 5f2f0cd639d45b2ef0fc2f92bd137a0d 767 Pfam PF00390 Malic enzyme, N-terminal domain 23 154 2.6E-25 T 25-04-2016 IPR012301 Malic enzyme, N-terminal domain GO:0004471|GO:0055114 RJP_RS02720 5f2f0cd639d45b2ef0fc2f92bd137a0d 767 ProSitePatterns PS00331 Malic enzymes signature. 162 178 - T 25-04-2016 IPR015884 Malic enzyme, conserved site GO:0004471|GO:0055114 RJP_RS02720 5f2f0cd639d45b2ef0fc2f92bd137a0d 767 Gene3D G3DSA:3.40.50.720 164 447 1.3E-82 T 25-04-2016 IPR016040 NAD(P)-binding domain RJP_RS02720 5f2f0cd639d45b2ef0fc2f92bd137a0d 767 SUPERFAMILY SSF53223 13 164 8.63E-51 T 25-04-2016 RJP_RS02720 5f2f0cd639d45b2ef0fc2f92bd137a0d 767 Pfam PF03949 Malic enzyme, NAD binding domain 168 359 1.1E-21 T 25-04-2016 IPR012302 Malic enzyme, NAD-binding GO:0004471|GO:0051287|GO:0055114 RJP_RS02720 5f2f0cd639d45b2ef0fc2f92bd137a0d 767 PIRSF PIRSF036684 1 767 0.0 T 25-04-2016 IPR012188 Malic enzyme, phosphate acetyl/butaryl transferase GO:0004473|GO:0005829|GO:0006108|GO:0016616|GO:0030145|GO:0046872|GO:0055114 KEGG: 00620+1.1.1.40|KEGG: 00710+1.1.1.40|MetaCyc: PWY-241|MetaCyc: PWY-7117 RJP_RS02720 5f2f0cd639d45b2ef0fc2f92bd137a0d 767 Pfam PF01515 Phosphate acetyl/butaryl transferase 443 759 2.6E-71 T 25-04-2016 IPR002505 Phosphate acetyl/butaryl transferase GO:0008152|GO:0016746 KEGG: 00430+2.3.1.8|KEGG: 00620+2.3.1.8|KEGG: 00640+2.3.1.8|KEGG: 00680+2.3.1.8|KEGG: 00720+2.3.1.8|MetaCyc: PWY-1281|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|MetaCyc: PWY-6637|UniPathway: UPA00340 RJP_RS02720 5f2f0cd639d45b2ef0fc2f92bd137a0d 767 Gene3D G3DSA:3.40.50.10750 579 735 2.6E-41 T 25-04-2016 RJP_RS02720 5f2f0cd639d45b2ef0fc2f92bd137a0d 767 SUPERFAMILY SSF51735 166 441 6.88E-82 T 25-04-2016 IPR016040 NAD(P)-binding domain RJP_RS02720 5f2f0cd639d45b2ef0fc2f92bd137a0d 767 PANTHER PTHR23406 1 457 6.2E-165 T 25-04-2016 RJP_RS02720 5f2f0cd639d45b2ef0fc2f92bd137a0d 767 SMART SM01274 21 154 5.3E-79 T 25-04-2016 IPR012301 Malic enzyme, N-terminal domain GO:0004471|GO:0055114 RJP_RS01740 c12621558219a0cf8ddc9f33b2bdaeeb 248 SUPERFAMILY SSF56655 1 244 5.24E-33 T 25-04-2016 RJP_RS01740 c12621558219a0cf8ddc9f33b2bdaeeb 248 PRINTS PR00377 Inositol monophosphatase superfamily signature 141 164 3.5E-8 T 25-04-2016 IPR000760 Inositol monophosphatase GO:0046854 RJP_RS01740 c12621558219a0cf8ddc9f33b2bdaeeb 248 PRINTS PR00377 Inositol monophosphatase superfamily signature 208 232 3.5E-8 T 25-04-2016 IPR000760 Inositol monophosphatase GO:0046854 RJP_RS01740 c12621558219a0cf8ddc9f33b2bdaeeb 248 PRINTS PR00377 Inositol monophosphatase superfamily signature 79 95 3.5E-8 T 25-04-2016 IPR000760 Inositol monophosphatase GO:0046854 RJP_RS01740 c12621558219a0cf8ddc9f33b2bdaeeb 248 PRINTS PR00377 Inositol monophosphatase superfamily signature 177 198 3.5E-8 T 25-04-2016 IPR000760 Inositol monophosphatase GO:0046854 RJP_RS01740 c12621558219a0cf8ddc9f33b2bdaeeb 248 Pfam PF00459 Inositol monophosphatase family 1 242 9.5E-15 T 25-04-2016 IPR000760 Inositol monophosphatase GO:0046854 RJP_RS01740 c12621558219a0cf8ddc9f33b2bdaeeb 248 Gene3D G3DSA:3.40.190.80 160 234 8.3E-8 T 25-04-2016 RJP_RS01740 c12621558219a0cf8ddc9f33b2bdaeeb 248 PANTHER PTHR20854:SF4 76 245 1.9E-13 T 25-04-2016 RJP_RS01740 c12621558219a0cf8ddc9f33b2bdaeeb 248 Gene3D G3DSA:3.30.540.10 2 159 4.4E-20 T 25-04-2016 RJP_RS01740 c12621558219a0cf8ddc9f33b2bdaeeb 248 PANTHER PTHR20854 76 245 1.9E-13 T 25-04-2016 IPR000760 Inositol monophosphatase GO:0046854 RJP_RS03470 e2820422eb63e8bc3469e4e5204e952a 462 Gene3D G3DSA:3.40.120.10 175 252 1.3E-34 T 25-04-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 RJP_RS03470 e2820422eb63e8bc3469e4e5204e952a 462 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 207 220 5.6E-22 T 25-04-2016 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 RJP_RS03470 e2820422eb63e8bc3469e4e5204e952a 462 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 236 251 5.6E-22 T 25-04-2016 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 RJP_RS03470 e2820422eb63e8bc3469e4e5204e952a 462 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 173 192 5.6E-22 T 25-04-2016 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 RJP_RS03470 e2820422eb63e8bc3469e4e5204e952a 462 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 95 109 5.6E-22 T 25-04-2016 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 RJP_RS03470 e2820422eb63e8bc3469e4e5204e952a 462 SUPERFAMILY SSF53738 5 137 1.61E-34 T 25-04-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 RJP_RS03470 e2820422eb63e8bc3469e4e5204e952a 462 PANTHER PTHR22573 1 462 1.7E-136 T 25-04-2016 RJP_RS03470 e2820422eb63e8bc3469e4e5204e952a 462 SUPERFAMILY SSF55957 370 455 1.26E-19 T 25-04-2016 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 RJP_RS03470 e2820422eb63e8bc3469e4e5204e952a 462 SUPERFAMILY SSF53738 261 367 2.0E-33 T 25-04-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 RJP_RS03470 e2820422eb63e8bc3469e4e5204e952a 462 ProSitePatterns PS00710 Phosphoglucomutase and phosphomannomutase phosphoserine signature. 96 105 - T 25-04-2016 IPR016066 Alpha-D-phosphohexomutase, conserved site GO:0000287 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 RJP_RS03470 e2820422eb63e8bc3469e4e5204e952a 462 PANTHER PTHR22573:SF28 1 462 1.7E-136 T 25-04-2016 RJP_RS03470 e2820422eb63e8bc3469e4e5204e952a 462 Gene3D G3DSA:3.40.120.10 255 370 1.0E-41 T 25-04-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 RJP_RS03470 e2820422eb63e8bc3469e4e5204e952a 462 Pfam PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain 387 445 6.5E-7 T 25-04-2016 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 RJP_RS03470 e2820422eb63e8bc3469e4e5204e952a 462 Pfam PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II 160 255 5.7E-23 T 25-04-2016 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II GO:0005975 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 RJP_RS03470 e2820422eb63e8bc3469e4e5204e952a 462 Gene3D G3DSA:3.40.120.10 4 141 7.8E-34 T 25-04-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 RJP_RS03470 e2820422eb63e8bc3469e4e5204e952a 462 Pfam PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III 261 372 3.8E-25 T 25-04-2016 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 RJP_RS03470 e2820422eb63e8bc3469e4e5204e952a 462 Pfam PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I 6 134 4.7E-33 T 25-04-2016 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 RJP_RS03470 e2820422eb63e8bc3469e4e5204e952a 462 Gene3D G3DSA:3.30.310.50 372 456 1.1E-22 T 25-04-2016 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 RJP_RS03470 e2820422eb63e8bc3469e4e5204e952a 462 SUPERFAMILY SSF53738 158 258 2.75E-27 T 25-04-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 RJP_RS00210 ac17f109b4e9c3d1ec30416c4aeb94ee 360 Gene3D G3DSA:3.40.50.300 5 140 2.1E-39 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RJP_RS00210 ac17f109b4e9c3d1ec30416c4aeb94ee 360 Gene3D G3DSA:3.40.50.300 237 353 2.1E-39 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RJP_RS00210 ac17f109b4e9c3d1ec30416c4aeb94ee 360 Gene3D G3DSA:3.40.50.300 174 191 2.1E-39 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RJP_RS00210 ac17f109b4e9c3d1ec30416c4aeb94ee 360 SUPERFAMILY SSF52540 5 355 1.32E-42 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RJP_RS00210 ac17f109b4e9c3d1ec30416c4aeb94ee 360 TIGRFAM TIGR00611 recf: DNA replication and repair protein RecF 5 353 5.2E-55 T 25-04-2016 IPR001238 DNA-binding, RecF GO:0003697|GO:0005524|GO:0006281 RJP_RS00210 ac17f109b4e9c3d1ec30416c4aeb94ee 360 Hamap MF_00365 DNA replication and repair protein RecF [recF]. 1 360 75.521 T 25-04-2016 IPR001238 DNA-binding, RecF GO:0003697|GO:0005524|GO:0006281 RJP_RS00210 ac17f109b4e9c3d1ec30416c4aeb94ee 360 Pfam PF02463 RecF/RecN/SMC N terminal domain 5 350 8.5E-21 T 25-04-2016 IPR003395 RecF/RecN/SMC, N-terminal RJP_RS00210 ac17f109b4e9c3d1ec30416c4aeb94ee 360 ProSitePatterns PS00617 RecF protein signature 1. 120 140 - T 25-04-2016 IPR018078 DNA-binding, RecF, conserved site GO:0003697|GO:0005524|GO:0006281 RJP_RS00210 ac17f109b4e9c3d1ec30416c4aeb94ee 360 PANTHER PTHR32182:SF0 1 360 1.3E-27 T 25-04-2016 IPR001238 DNA-binding, RecF GO:0003697|GO:0005524|GO:0006281 RJP_RS00210 ac17f109b4e9c3d1ec30416c4aeb94ee 360 ProSitePatterns PS00618 RecF protein signature 2. 309 327 - T 25-04-2016 IPR018078 DNA-binding, RecF, conserved site GO:0003697|GO:0005524|GO:0006281 RJP_RS00210 ac17f109b4e9c3d1ec30416c4aeb94ee 360 PANTHER PTHR32182 1 360 1.3E-27 T 25-04-2016 RJP_RS00480 0626ab7b681bf58491c07f30ff347d8d 498 PANTHER PTHR31187:SF1 12 497 9.1E-137 T 25-04-2016 RJP_RS00480 0626ab7b681bf58491c07f30ff347d8d 498 TIGRFAM TIGR00769 AAA: ADP/ATP carrier protein family 20 489 4.0E-211 T 25-04-2016 IPR004667 ADP/ATP carrier protein GO:0005471|GO:0005524|GO:0006810|GO:0016021 RJP_RS00480 0626ab7b681bf58491c07f30ff347d8d 498 PANTHER PTHR31187 12 497 9.1E-137 T 25-04-2016 IPR004667 ADP/ATP carrier protein GO:0005471|GO:0005524|GO:0006810|GO:0016021 RJP_RS00480 0626ab7b681bf58491c07f30ff347d8d 498 Pfam PF03219 TLC ATP/ADP transporter 5 489 8.0E-206 T 25-04-2016 IPR004667 ADP/ATP carrier protein GO:0005471|GO:0005524|GO:0006810|GO:0016021 RJP_RS00480 0626ab7b681bf58491c07f30ff347d8d 498 SUPERFAMILY SSF103473 143 486 3.53E-6 T 25-04-2016 IPR020846 Major facilitator superfamily domain RJP_RS00480 0626ab7b681bf58491c07f30ff347d8d 498 SUPERFAMILY SSF103473 25 112 3.53E-6 T 25-04-2016 IPR020846 Major facilitator superfamily domain RJP_RS06185 d10669554d77cf133548d9e598ac6464 432 TIGRFAM TIGR03026 NDP-sugDHase: nucleotide sugar dehydrogenase 1 411 3.3E-146 T 25-04-2016 IPR017476 UDP-glucose/GDP-mannose dehydrogenase GO:0016616|GO:0055114 RJP_RS06185 d10669554d77cf133548d9e598ac6464 432 PANTHER PTHR11374:SF18 1 429 2.7E-221 T 25-04-2016 RJP_RS06185 d10669554d77cf133548d9e598ac6464 432 PANTHER PTHR11374 1 429 2.7E-221 T 25-04-2016 IPR017476 UDP-glucose/GDP-mannose dehydrogenase GO:0016616|GO:0055114 RJP_RS06185 d10669554d77cf133548d9e598ac6464 432 SMART SM00984 312 415 8.6E-42 T 25-04-2016 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 RJP_RS06185 d10669554d77cf133548d9e598ac6464 432 SUPERFAMILY SSF48179 196 289 1.87E-29 T 25-04-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 RJP_RS06185 d10669554d77cf133548d9e598ac6464 432 SUPERFAMILY SSF51735 1 185 3.63E-47 T 25-04-2016 IPR016040 NAD(P)-binding domain RJP_RS06185 d10669554d77cf133548d9e598ac6464 432 Pfam PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain 1 181 2.1E-63 T 25-04-2016 IPR001732 UDP-glucose/GDP-mannose dehydrogenase, N-terminal GO:0016616|GO:0051287|GO:0055114 RJP_RS06185 d10669554d77cf133548d9e598ac6464 432 Gene3D G3DSA:3.40.50.720 228 431 1.7E-71 T 25-04-2016 IPR016040 NAD(P)-binding domain RJP_RS06185 d10669554d77cf133548d9e598ac6464 432 Pfam PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain 197 288 1.5E-34 T 25-04-2016 IPR014026 UDP-glucose/GDP-mannose dehydrogenase, dimerisation GO:0016616|GO:0051287|GO:0055114 RJP_RS06185 d10669554d77cf133548d9e598ac6464 432 Gene3D G3DSA:1.20.5.100 200 225 3.2E-17 T 25-04-2016 RJP_RS06185 d10669554d77cf133548d9e598ac6464 432 PIRSF PIRSF000124 1 430 1.3E-131 T 25-04-2016 IPR017476 UDP-glucose/GDP-mannose dehydrogenase GO:0016616|GO:0055114 RJP_RS06185 d10669554d77cf133548d9e598ac6464 432 Gene3D G3DSA:3.40.50.720 1 199 2.2E-67 T 25-04-2016 IPR016040 NAD(P)-binding domain RJP_RS06185 d10669554d77cf133548d9e598ac6464 432 SUPERFAMILY SSF52413 302 426 9.42E-36 T 25-04-2016 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 RJP_RS06185 d10669554d77cf133548d9e598ac6464 432 PIRSF PIRSF500134 1 432 1.9E-154 T 25-04-2016 IPR028357 UDP-glucose 6-dehydrogenase, bacterial type GO:0000271|GO:0003979 KEGG: 00040+1.1.1.22|KEGG: 00053+1.1.1.22|KEGG: 00500+1.1.1.22|KEGG: 00520+1.1.1.22|MetaCyc: PWY-7346|UniPathway: UPA00038 RJP_RS06185 d10669554d77cf133548d9e598ac6464 432 Pfam PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain 312 415 1.1E-30 T 25-04-2016 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 RJP_RS02855 c798f7163bac6c77e3aebcc556091533 587 Pfam PF00005 ABC transporter 364 512 3.7E-31 T 25-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 RJP_RS02855 c798f7163bac6c77e3aebcc556091533 587 Gene3D G3DSA:3.40.50.300 347 577 2.5E-77 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RJP_RS02855 c798f7163bac6c77e3aebcc556091533 587 SMART SM00382 372 558 3.5E-14 T 25-04-2016 IPR003593 AAA+ ATPase domain RJP_RS02855 c798f7163bac6c77e3aebcc556091533 587 Gene3D G3DSA:1.20.1560.10 21 336 1.6E-69 T 25-04-2016 RJP_RS02855 c798f7163bac6c77e3aebcc556091533 587 SUPERFAMILY SSF90123 18 334 1.83E-70 T 25-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 RJP_RS02855 c798f7163bac6c77e3aebcc556091533 587 ProSitePatterns PS00211 ABC transporters family signature. 484 498 - T 25-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 RJP_RS02855 c798f7163bac6c77e3aebcc556091533 587 PANTHER PTHR24221 16 581 3.4E-194 T 25-04-2016 RJP_RS02855 c798f7163bac6c77e3aebcc556091533 587 Pfam PF00664 ABC transporter transmembrane region 33 297 7.4E-42 T 25-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 RJP_RS02855 c798f7163bac6c77e3aebcc556091533 587 SUPERFAMILY SSF52540 340 581 6.89E-84 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RJP_RS05995 2e61618503281ca441b94015f6227237 115 TIGRFAM TIGR01045 RPE1: rickettsial palindromic element RPE1 domain 8 50 3.6E-21 T 25-04-2016 IPR005728 Rickettsial palindromic element RJP_RS02285 00e0c87efc5903283fe14d5781323e49 323 Gene3D G3DSA:3.30.1150.10 201 321 1.3E-9 T 25-04-2016 RJP_RS02285 00e0c87efc5903283fe14d5781323e49 323 SUPERFAMILY SSF74653 213 321 1.65E-11 T 25-04-2016 RJP_RS03005 c38917e13b4c2835fe6bce13a025d873 235 PANTHER PTHR32063:SF21 1 235 1.3E-110 T 25-04-2016 RJP_RS03005 c38917e13b4c2835fe6bce13a025d873 235 Gene3D G3DSA:1.10.3850.10 88 230 8.9E-31 T 25-04-2016 RJP_RS03005 c38917e13b4c2835fe6bce13a025d873 235 Gene3D G3DSA:3.30.2090.10 1 80 5.7E-14 T 25-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains RJP_RS03005 c38917e13b4c2835fe6bce13a025d873 235 PANTHER PTHR32063 1 235 1.3E-110 T 25-04-2016 RJP_RS03005 c38917e13b4c2835fe6bce13a025d873 235 Pfam PF00873 AcrB/AcrD/AcrF family 1 232 3.1E-63 T 25-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 RJP_RS03005 c38917e13b4c2835fe6bce13a025d873 235 SUPERFAMILY SSF82866 83 230 3.4E-25 T 25-04-2016 RJP_RS03005 c38917e13b4c2835fe6bce13a025d873 235 SUPERFAMILY SSF82714 1 82 7.72E-14 T 25-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains RJP_RS00695 90fbfea0abcfa9022ab076a4b2fcc089 251 Pfam PF04333 MlaA lipoprotein 43 236 1.3E-61 T 25-04-2016 IPR007428 MlaA lipoprotein GO:0016020 RJP_RS00695 90fbfea0abcfa9022ab076a4b2fcc089 251 PRINTS PR01805 VacJ lipoprotein signature 61 77 1.3E-27 T 25-04-2016 IPR007428 MlaA lipoprotein GO:0016020 RJP_RS00695 90fbfea0abcfa9022ab076a4b2fcc089 251 PRINTS PR01805 VacJ lipoprotein signature 44 57 1.3E-27 T 25-04-2016 IPR007428 MlaA lipoprotein GO:0016020 RJP_RS00695 90fbfea0abcfa9022ab076a4b2fcc089 251 PRINTS PR01805 VacJ lipoprotein signature 112 129 1.3E-27 T 25-04-2016 IPR007428 MlaA lipoprotein GO:0016020 RJP_RS00695 90fbfea0abcfa9022ab076a4b2fcc089 251 PRINTS PR01805 VacJ lipoprotein signature 148 165 1.3E-27 T 25-04-2016 IPR007428 MlaA lipoprotein GO:0016020 RJP_RS00695 90fbfea0abcfa9022ab076a4b2fcc089 251 PANTHER PTHR30035 40 238 1.6E-40 T 25-04-2016 IPR007428 MlaA lipoprotein GO:0016020 RJP_RS03050 692b17be5162c1405a91cbd908d6a69d 89 Gene3D G3DSA:1.20.1600.10 5 88 1.1E-15 T 25-04-2016 RJP_RS03050 692b17be5162c1405a91cbd908d6a69d 89 Pfam PF02321 Outer membrane efflux protein 8 86 1.4E-8 T 25-04-2016 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 RJP_RS03050 692b17be5162c1405a91cbd908d6a69d 89 SUPERFAMILY SSF56954 6 88 7.59E-14 T 25-04-2016 RJP_RS04045 7d4059b724c2e3cbbf8351fdc735c37e 427 Pfam PF13520 Amino acid permease 5 397 1.5E-50 T 25-04-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 RJP_RS04045 7d4059b724c2e3cbbf8351fdc735c37e 427 PANTHER PTHR11785 1 418 9.3E-71 T 25-04-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 RJP_RS04045 7d4059b724c2e3cbbf8351fdc735c37e 427 PANTHER PTHR11785:SF259 1 418 9.3E-71 T 25-04-2016 RJP_RS04045 7d4059b724c2e3cbbf8351fdc735c37e 427 PIRSF PIRSF006060 1 426 3.4E-74 T 25-04-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 RJP_RS03305 d8765145618a976583edb92a8a3fa19c 343 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 23 308 7.8E-58 T 25-04-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme RJP_RS03305 d8765145618a976583edb92a8a3fa19c 343 PANTHER PTHR10314:SF36 9 323 1.1E-111 T 25-04-2016 RJP_RS03305 d8765145618a976583edb92a8a3fa19c 343 Gene3D G3DSA:3.40.50.1100 76 324 1.1E-48 T 25-04-2016 RJP_RS03305 d8765145618a976583edb92a8a3fa19c 343 SUPERFAMILY SSF53686 9 318 3.8E-70 T 25-04-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme RJP_RS03305 d8765145618a976583edb92a8a3fa19c 343 PANTHER PTHR10314 9 323 1.1E-111 T 25-04-2016 RJP_RS03650 0e1d3104cf19bf087a6579af6d5244c6 458 Pfam PF07498 Rho termination factor, N-terminal domain 35 76 3.5E-14 T 25-04-2016 IPR011112 Rho termination factor, N-terminal GO:0006353 RJP_RS03650 0e1d3104cf19bf087a6579af6d5244c6 458 PANTHER PTHR15184 6 176 1.5E-180 T 25-04-2016 RJP_RS03650 0e1d3104cf19bf087a6579af6d5244c6 458 PANTHER PTHR15184 192 448 1.5E-180 T 25-04-2016 RJP_RS03650 0e1d3104cf19bf087a6579af6d5244c6 458 Gene3D G3DSA:2.40.50.140 79 147 9.4E-36 T 25-04-2016 IPR012340 Nucleic acid-binding, OB-fold RJP_RS03650 0e1d3104cf19bf087a6579af6d5244c6 458 Hamap MF_01884 Transcription termination factor Rho [rho]. 31 451 231.131 T 25-04-2016 IPR004665 Transcription termination factor Rho GO:0003723|GO:0005524|GO:0006353|GO:0008186 RJP_RS03650 0e1d3104cf19bf087a6579af6d5244c6 458 TIGRFAM TIGR00767 rho: transcription termination factor Rho 32 449 3.6E-215 T 25-04-2016 IPR004665 Transcription termination factor Rho GO:0003723|GO:0005524|GO:0006353|GO:0008186 RJP_RS03650 0e1d3104cf19bf087a6579af6d5244c6 458 SUPERFAMILY SSF50249 79 154 5.65E-29 T 25-04-2016 IPR012340 Nucleic acid-binding, OB-fold RJP_RS03650 0e1d3104cf19bf087a6579af6d5244c6 458 Gene3D G3DSA:1.10.720.10 31 76 7.3E-17 T 25-04-2016 RJP_RS03650 0e1d3104cf19bf087a6579af6d5244c6 458 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 191 395 5.1E-23 T 25-04-2016 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 RJP_RS03650 0e1d3104cf19bf087a6579af6d5244c6 458 SMART SM00382 202 369 4.8E-7 T 25-04-2016 IPR003593 AAA+ ATPase domain RJP_RS03650 0e1d3104cf19bf087a6579af6d5244c6 458 Pfam PF07497 Rho termination factor, RNA-binding domain 82 154 7.5E-32 T 25-04-2016 IPR011113 Rho termination factor, RNA-binding GO:0003723|GO:0006353 RJP_RS03650 0e1d3104cf19bf087a6579af6d5244c6 458 SUPERFAMILY SSF68912 31 75 2.71E-9 T 25-04-2016 IPR011112 Rho termination factor, N-terminal GO:0006353 RJP_RS03650 0e1d3104cf19bf087a6579af6d5244c6 458 PANTHER PTHR15184:SF34 6 176 1.5E-180 T 25-04-2016 RJP_RS03650 0e1d3104cf19bf087a6579af6d5244c6 458 PANTHER PTHR15184:SF34 192 448 1.5E-180 T 25-04-2016 RJP_RS03650 0e1d3104cf19bf087a6579af6d5244c6 458 SMART SM00357 82 148 1.6E-16 T 25-04-2016 IPR011129 Cold shock protein GO:0003676 RJP_RS03650 0e1d3104cf19bf087a6579af6d5244c6 458 Gene3D G3DSA:3.40.50.300 160 449 1.6E-106 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RJP_RS03650 0e1d3104cf19bf087a6579af6d5244c6 458 SMART SM00959 35 77 3.4E-13 T 25-04-2016 IPR011112 Rho termination factor, N-terminal GO:0006353 RJP_RS03650 0e1d3104cf19bf087a6579af6d5244c6 458 SUPERFAMILY SSF52540 120 403 8.22E-68 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RJP_RS01385 89700e32ac997f92ee5d2a73d529de31 148 Gene3D G3DSA:3.40.50.620 7 146 5.9E-26 T 25-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold RJP_RS01385 89700e32ac997f92ee5d2a73d529de31 148 Pfam PF00582 Universal stress protein family 7 146 4.2E-22 T 25-04-2016 IPR006016 UspA GO:0006950 RJP_RS01385 89700e32ac997f92ee5d2a73d529de31 148 PANTHER PTHR31964 6 148 7.1E-13 T 25-04-2016 RJP_RS01385 89700e32ac997f92ee5d2a73d529de31 148 SUPERFAMILY SSF52402 7 147 6.28E-24 T 25-04-2016 RJP_RS01385 89700e32ac997f92ee5d2a73d529de31 148 PRINTS PR01438 Universal stress protein signature 107 119 1.8E-6 T 25-04-2016 IPR006015 Universal stress protein A RJP_RS01385 89700e32ac997f92ee5d2a73d529de31 148 PRINTS PR01438 Universal stress protein signature 7 25 1.8E-6 T 25-04-2016 IPR006015 Universal stress protein A RJP_RS01385 89700e32ac997f92ee5d2a73d529de31 148 PRINTS PR01438 Universal stress protein signature 124 146 1.8E-6 T 25-04-2016 IPR006015 Universal stress protein A RJP_RS00985 cdd5f3e550a4543bccaf597f90f8d3f5 125 Gene3D G3DSA:3.30.1390.10 53 125 1.3E-30 T 25-04-2016 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like RJP_RS00985 cdd5f3e550a4543bccaf597f90f8d3f5 125 Hamap MF_00368 50S ribosomal protein L7/L12 [rplL]. 1 125 22.749 T 25-04-2016 IPR000206 Ribosomal protein L7/L12 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RJP_RS00985 cdd5f3e550a4543bccaf597f90f8d3f5 125 SUPERFAMILY SSF48300 4 61 3.4E-15 T 25-04-2016 IPR008932 Ribosomal protein L7/L12, oligomerisation GO:0003735|GO:0005622|GO:0005840|GO:0006412 RJP_RS00985 cdd5f3e550a4543bccaf597f90f8d3f5 125 Gene3D G3DSA:1.20.5.710 7 51 3.6E-16 T 25-04-2016 RJP_RS00985 cdd5f3e550a4543bccaf597f90f8d3f5 125 TIGRFAM TIGR00855 L12: ribosomal protein bL12 1 125 9.8E-48 T 25-04-2016 IPR000206 Ribosomal protein L7/L12 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RJP_RS00985 cdd5f3e550a4543bccaf597f90f8d3f5 125 Pfam PF00542 Ribosomal protein L7/L12 C-terminal domain 59 125 3.3E-28 T 25-04-2016 IPR013823 Ribosomal protein L7/L12, C-terminal GO:0003735|GO:0006412 RJP_RS00985 cdd5f3e550a4543bccaf597f90f8d3f5 125 ProDom PD001326 RIBOSOMAL L7/L12 50S RIBONUCLEOPROTEIN CHLOROPLAST L12 PLASTID DIRECT SEQUENCING PEPTIDE 60 125 2.0E-19 T 25-04-2016 IPR013823 Ribosomal protein L7/L12, C-terminal GO:0003735|GO:0006412 RJP_RS00985 cdd5f3e550a4543bccaf597f90f8d3f5 125 Pfam PF16320 Ribosomal protein L7/L12 dimerisation domain 5 49 5.4E-17 T 25-04-2016 IPR008932 Ribosomal protein L7/L12, oligomerisation GO:0003735|GO:0005622|GO:0005840|GO:0006412 RJP_RS00985 cdd5f3e550a4543bccaf597f90f8d3f5 125 SUPERFAMILY SSF54736 55 125 1.48E-23 T 25-04-2016 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like RJP_RS05635 33c84f01474860288da7d5bf41534a45 314 PANTHER PTHR30480:SF7 5 287 7.0E-83 T 25-04-2016 RJP_RS05635 33c84f01474860288da7d5bf41534a45 314 PANTHER PTHR30480 5 287 7.0E-83 T 25-04-2016 RJP_RS05635 33c84f01474860288da7d5bf41534a45 314 SUPERFAMILY SSF51445 8 290 3.79E-65 T 25-04-2016 IPR017853 Glycoside hydrolase superfamily RJP_RS05635 33c84f01474860288da7d5bf41534a45 314 Gene3D G3DSA:3.20.20.300 9 294 2.3E-70 T 25-04-2016 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 RJP_RS05635 33c84f01474860288da7d5bf41534a45 314 Pfam PF00933 Glycosyl hydrolase family 3 N terminal domain 17 304 1.9E-55 T 25-04-2016 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 RJP_RS06920 7b5ae675d6cbfd93d47f43ff2a20e4f7 111 PANTHER PTHR12919 2 111 2.0E-42 T 25-04-2016 IPR000307 Ribosomal protein S16 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RJP_RS06920 7b5ae675d6cbfd93d47f43ff2a20e4f7 111 Pfam PF00886 Ribosomal protein S16 9 70 2.8E-25 T 25-04-2016 IPR000307 Ribosomal protein S16 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RJP_RS06920 7b5ae675d6cbfd93d47f43ff2a20e4f7 111 TIGRFAM TIGR00002 S16: ribosomal protein bS16 3 82 1.6E-32 T 25-04-2016 IPR000307 Ribosomal protein S16 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RJP_RS06920 7b5ae675d6cbfd93d47f43ff2a20e4f7 111 Hamap MF_00385 30S ribosomal protein S16 [rpsP]. 2 80 23.752 T 25-04-2016 IPR000307 Ribosomal protein S16 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RJP_RS06920 7b5ae675d6cbfd93d47f43ff2a20e4f7 111 Gene3D G3DSA:3.30.1320.10 2 82 2.5E-32 T 25-04-2016 IPR023803 Ribosomal protein S16 domain RJP_RS06920 7b5ae675d6cbfd93d47f43ff2a20e4f7 111 ProSitePatterns PS00732 Ribosomal protein S16 signature. 3 12 - T 25-04-2016 IPR020592 Ribosomal protein S16, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 RJP_RS06920 7b5ae675d6cbfd93d47f43ff2a20e4f7 111 SUPERFAMILY SSF54565 2 95 1.15E-30 T 25-04-2016 IPR023803 Ribosomal protein S16 domain RJP_RS02465 91c3667adb98e6ffa8ef925264f1c4db 377 Pfam PF02350 UDP-N-acetylglucosamine 2-epimerase 28 361 8.7E-89 T 25-04-2016 IPR003331 UDP-N-acetylglucosamine 2-epimerase domain RJP_RS02465 91c3667adb98e6ffa8ef925264f1c4db 377 SUPERFAMILY SSF53756 1 375 2.01E-108 T 25-04-2016 RJP_RS02465 91c3667adb98e6ffa8ef925264f1c4db 377 Gene3D G3DSA:3.40.50.2000 197 365 4.9E-60 T 25-04-2016 RJP_RS02465 91c3667adb98e6ffa8ef925264f1c4db 377 PANTHER PTHR18964 1 376 1.9E-153 T 25-04-2016 RJP_RS02465 91c3667adb98e6ffa8ef925264f1c4db 377 Gene3D G3DSA:3.40.50.2000 1 196 4.1E-64 T 25-04-2016 RJP_RS02465 91c3667adb98e6ffa8ef925264f1c4db 377 TIGRFAM TIGR00236 wecB: UDP-N-acetylglucosamine 2-epimerase 2 364 9.7E-78 T 25-04-2016 IPR029767 UDP-N-acetylglucosamine 2-epimerase WecB-like GO:0008761 KEGG: 00520+5.1.3.14|MetaCyc: PWY-7335 RJP_RS02465 91c3667adb98e6ffa8ef925264f1c4db 377 PANTHER PTHR18964:SF70 1 376 1.9E-153 T 25-04-2016 RJP_RS02275 faeacd123708a67f64c311e6b0cf139a 241 PANTHER PTHR30625 20 241 2.0E-58 T 25-04-2016 RJP_RS02275 faeacd123708a67f64c311e6b0cf139a 241 TIGRFAM TIGR02796 tolQ: protein TolQ 20 234 2.5E-78 T 25-04-2016 IPR014163 Tol-Pal system, TolQ GO:0015031|GO:0016021 RJP_RS02275 faeacd123708a67f64c311e6b0cf139a 241 Pfam PF01618 MotA/TolQ/ExbB proton channel family 92 222 1.6E-41 T 25-04-2016 IPR002898 MotA/TolQ/ExbB proton channel GO:0006810|GO:0008565|GO:0016020 RJP_RS02275 faeacd123708a67f64c311e6b0cf139a 241 PANTHER PTHR30625:SF3 20 241 2.0E-58 T 25-04-2016 RJP_RS01410 e91bde0cb7a5779df564f342efa28709 166 Hamap MF_00682 Co-chaperone protein HscB [hscB]. 2 166 16.429 T 25-04-2016 IPR004640 Co-chaperone Hsc20 GO:0006457|GO:0051087 RJP_RS01410 e91bde0cb7a5779df564f342efa28709 166 PANTHER PTHR14021 3 162 1.2E-20 T 25-04-2016 IPR004640 Co-chaperone Hsc20 GO:0006457|GO:0051087 RJP_RS01410 e91bde0cb7a5779df564f342efa28709 166 Gene3D G3DSA:1.20.1280.20 102 163 2.2E-4 T 25-04-2016 IPR009073 Co-chaperone HscB, C-terminal oligomerisation domain GO:0051259 RJP_RS01410 e91bde0cb7a5779df564f342efa28709 166 PANTHER PTHR14021:SF15 3 162 1.2E-20 T 25-04-2016 RJP_RS01410 e91bde0cb7a5779df564f342efa28709 166 SUPERFAMILY SSF46565 3 73 2.09E-15 T 25-04-2016 IPR001623 DnaJ domain RJP_RS01410 e91bde0cb7a5779df564f342efa28709 166 Pfam PF00226 DnaJ domain 3 69 5.2E-9 T 25-04-2016 IPR001623 DnaJ domain RJP_RS01410 e91bde0cb7a5779df564f342efa28709 166 Gene3D G3DSA:1.10.287.110 2 76 9.4E-20 T 25-04-2016 IPR001623 DnaJ domain RJP_RS01410 e91bde0cb7a5779df564f342efa28709 166 SMART SM00271 2 65 2.7E-9 T 25-04-2016 IPR001623 DnaJ domain RJP_RS01410 e91bde0cb7a5779df564f342efa28709 166 TIGRFAM TIGR00714 hscB: Fe-S protein assembly co-chaperone HscB 14 166 7.7E-47 T 25-04-2016 IPR004640 Co-chaperone Hsc20 GO:0006457|GO:0051087 RJP_RS01410 e91bde0cb7a5779df564f342efa28709 166 SUPERFAMILY SSF47144 96 164 2.48E-9 T 25-04-2016 IPR009073 Co-chaperone HscB, C-terminal oligomerisation domain GO:0051259 RJP_RS02040 0a4e64838bb6788505a65396fa9d44f3 176 PANTHER PTHR21262 16 176 3.3E-29 T 25-04-2016 RJP_RS02040 0a4e64838bb6788505a65396fa9d44f3 176 Pfam PF13328 HD domain 45 175 1.1E-16 T 25-04-2016 IPR003607 HD/PDEase domain RJP_RS02040 0a4e64838bb6788505a65396fa9d44f3 176 PANTHER PTHR21262:SF0 16 176 3.3E-29 T 25-04-2016 RJP_RS02040 0a4e64838bb6788505a65396fa9d44f3 176 SUPERFAMILY SSF109604 19 175 1.78E-41 T 25-04-2016 RJP_RS03240 7f3c7ef16dbcdceccfa056e4825faa84 328 SUPERFAMILY SSF51735 2 181 1.79E-36 T 25-04-2016 IPR016040 NAD(P)-binding domain RJP_RS03240 7f3c7ef16dbcdceccfa056e4825faa84 328 Pfam PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus 6 159 2.1E-34 T 25-04-2016 IPR011128 Glycerol-3-phosphate dehydrogenase, NAD-dependent, N-terminal GO:0016616|GO:0046168|GO:0051287|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|UniPathway: UPA00940 RJP_RS03240 7f3c7ef16dbcdceccfa056e4825faa84 328 Gene3D G3DSA:3.40.50.720 1 184 2.4E-40 T 25-04-2016 IPR016040 NAD(P)-binding domain RJP_RS03240 7f3c7ef16dbcdceccfa056e4825faa84 328 PANTHER PTHR11728:SF1 5 309 1.9E-62 T 25-04-2016 RJP_RS03240 7f3c7ef16dbcdceccfa056e4825faa84 328 PIRSF PIRSF000114 1 326 3.4E-89 T 25-04-2016 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|UniPathway: UPA00940 RJP_RS03240 7f3c7ef16dbcdceccfa056e4825faa84 328 Hamap MF_00394 Glycerol-3-phosphate dehydrogenase [NAD(P)+] [gpsA]. 5 325 27.676 T 25-04-2016 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|UniPathway: UPA00940 RJP_RS03240 7f3c7ef16dbcdceccfa056e4825faa84 328 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 174 198 2.5E-22 T 25-04-2016 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|UniPathway: UPA00940 RJP_RS03240 7f3c7ef16dbcdceccfa056e4825faa84 328 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 199 223 2.5E-22 T 25-04-2016 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|UniPathway: UPA00940 RJP_RS03240 7f3c7ef16dbcdceccfa056e4825faa84 328 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 9 26 2.5E-22 T 25-04-2016 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|UniPathway: UPA00940 RJP_RS03240 7f3c7ef16dbcdceccfa056e4825faa84 328 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 241 258 2.5E-22 T 25-04-2016 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|UniPathway: UPA00940 RJP_RS03240 7f3c7ef16dbcdceccfa056e4825faa84 328 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 134 154 2.5E-22 T 25-04-2016 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|UniPathway: UPA00940 RJP_RS03240 7f3c7ef16dbcdceccfa056e4825faa84 328 SUPERFAMILY SSF48179 180 314 3.06E-30 T 25-04-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 RJP_RS03240 7f3c7ef16dbcdceccfa056e4825faa84 328 Gene3D G3DSA:1.10.1040.10 185 315 1.1E-31 T 25-04-2016 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 RJP_RS03240 7f3c7ef16dbcdceccfa056e4825faa84 328 ProSitePatterns PS00957 NAD-dependent glycerol-3-phosphate dehydrogenase signature. 189 210 - T 25-04-2016 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|UniPathway: UPA00940 RJP_RS03240 7f3c7ef16dbcdceccfa056e4825faa84 328 Pfam PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus 181 314 6.4E-29 T 25-04-2016 IPR006109 Glycerol-3-phosphate dehydrogenase, NAD-dependent, C-terminal GO:0004367|GO:0005975|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|UniPathway: UPA00940 RJP_RS03240 7f3c7ef16dbcdceccfa056e4825faa84 328 PANTHER PTHR11728 5 309 1.9E-62 T 25-04-2016 RJP_RS04495 4122ee63d4313eb5cd09937f7c361134 63 Gene3D G3DSA:1.10.443.10 1 54 1.0E-11 T 25-04-2016 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 RJP_RS04495 4122ee63d4313eb5cd09937f7c361134 63 SUPERFAMILY SSF56349 2 53 1.15E-12 T 25-04-2016 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 RJP_RS04495 4122ee63d4313eb5cd09937f7c361134 63 Pfam PF00589 Phage integrase family 2 43 1.1E-8 T 25-04-2016 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 RJP_RS06295 59c959c64c513a4759a39513a6bd306b 112 ProDom PD000944 ATP SYNTHASE ION EPSILON SUBUNIT HYDROLASE CF1 SYNTHESIS CHAIN HYDROGEN 20 92 4.0E-35 T 25-04-2016 IPR020546 ATPase, F1 complex, delta/epsilon subunit, N-terminal GO:0015986|GO:0045261|GO:0046933|GO:0046961 RJP_RS06295 59c959c64c513a4759a39513a6bd306b 112 PANTHER PTHR13822 1 111 2.8E-17 T 25-04-2016 IPR001469 ATPase, F1 complex, delta/epsilon subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 RJP_RS06295 59c959c64c513a4759a39513a6bd306b 112 Pfam PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain 7 86 2.8E-20 T 25-04-2016 IPR020546 ATPase, F1 complex, delta/epsilon subunit, N-terminal GO:0015986|GO:0045261|GO:0046933|GO:0046961 RJP_RS06295 59c959c64c513a4759a39513a6bd306b 112 TIGRFAM TIGR01216 ATP_synt_epsi: ATP synthase F1, epsilon subunit 5 111 1.4E-21 T 25-04-2016 IPR001469 ATPase, F1 complex, delta/epsilon subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 RJP_RS06295 59c959c64c513a4759a39513a6bd306b 112 SUPERFAMILY SSF51344 4 87 3.79E-19 T 25-04-2016 IPR020546 ATPase, F1 complex, delta/epsilon subunit, N-terminal GO:0015986|GO:0045261|GO:0046933|GO:0046961 RJP_RS06295 59c959c64c513a4759a39513a6bd306b 112 Gene3D G3DSA:2.60.15.10 4 92 5.7E-23 T 25-04-2016 IPR020546 ATPase, F1 complex, delta/epsilon subunit, N-terminal GO:0015986|GO:0045261|GO:0046933|GO:0046961 RJP_RS06295 59c959c64c513a4759a39513a6bd306b 112 Hamap MF_00530 ATP synthase epsilon chain [atpC]. 3 110 14.325 T 25-04-2016 IPR001469 ATPase, F1 complex, delta/epsilon subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 RJP_RS06875 0f364f1688312bce2a0c4c0a96cac938 84 SUPERFAMILY SSF116734 2 82 1.21E-18 T 25-04-2016 RJP_RS06875 0f364f1688312bce2a0c4c0a96cac938 84 Pfam PF01420 Type I restriction modification DNA specificity domain 3 70 4.5E-12 T 25-04-2016 IPR000055 Restriction endonuclease, type I, HsdS GO:0003677|GO:0006304 RJP_RS05455 43ba311e8fd38f3ffa4973d2970553bc 455 PANTHER PTHR23508 10 227 1.3E-48 T 25-04-2016 RJP_RS05455 43ba311e8fd38f3ffa4973d2970553bc 455 PANTHER PTHR23508 251 438 1.3E-48 T 25-04-2016 RJP_RS05455 43ba311e8fd38f3ffa4973d2970553bc 455 Gene3D G3DSA:1.20.1250.20 12 194 5.1E-10 T 25-04-2016 RJP_RS05455 43ba311e8fd38f3ffa4973d2970553bc 455 SUPERFAMILY SSF103473 244 437 2.62E-32 T 25-04-2016 IPR020846 Major facilitator superfamily domain RJP_RS05455 43ba311e8fd38f3ffa4973d2970553bc 455 SUPERFAMILY SSF103473 10 210 2.62E-32 T 25-04-2016 IPR020846 Major facilitator superfamily domain RJP_RS05455 43ba311e8fd38f3ffa4973d2970553bc 455 Gene3D G3DSA:1.20.1250.20 263 439 5.4E-6 T 25-04-2016 RJP_RS03215 c7b064f68313b69240be6dc3ccebdb92 201 SUPERFAMILY SSF111304 7 200 1.57E-64 T 25-04-2016 IPR023627 Recombination protein RecR RJP_RS03215 c7b064f68313b69240be6dc3ccebdb92 201 Hamap MF_00017 Recombination protein RecR [recR]. 1 200 76.568 T 25-04-2016 IPR000093 DNA recombination protein RecR GO:0003677|GO:0006281|GO:0006310 RJP_RS03215 c7b064f68313b69240be6dc3ccebdb92 201 Pfam PF02132 RecR protein 43 80 2.5E-10 T 25-04-2016 IPR023628 Recombination protein RecR, C4-type zinc finger RJP_RS03215 c7b064f68313b69240be6dc3ccebdb92 201 PANTHER PTHR30446 3 201 1.1E-71 T 25-04-2016 RJP_RS03215 c7b064f68313b69240be6dc3ccebdb92 201 TIGRFAM TIGR00615 recR: recombination protein RecR 7 197 1.3E-55 T 25-04-2016 IPR000093 DNA recombination protein RecR GO:0003677|GO:0006281|GO:0006310 RJP_RS03215 c7b064f68313b69240be6dc3ccebdb92 201 SMART SM00493 82 167 3.6E-5 T 25-04-2016 IPR006171 Toprim domain RJP_RS03215 c7b064f68313b69240be6dc3ccebdb92 201 ProSitePatterns PS01300 RecR protein signature. 59 80 - T 25-04-2016 IPR015967 Recombination protein RecR, conserved site GO:0006281|GO:0006310 RJP_RS03215 c7b064f68313b69240be6dc3ccebdb92 201 Pfam PF13662 Toprim domain 82 173 6.7E-21 T 25-04-2016 IPR006171 Toprim domain RJP_RS03215 c7b064f68313b69240be6dc3ccebdb92 201 PANTHER PTHR30446:SF0 3 201 1.1E-71 T 25-04-2016 RJP_RS06650 afa4d0174e5eb96486c1803ff6f21a85 445 Pfam PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase 157 232 2.9E-10 T 25-04-2016 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain GO:0006457 RJP_RS06650 afa4d0174e5eb96486c1803ff6f21a85 445 Hamap MF_00303 Trigger factor [tig]. 1 422 19.962 T 25-04-2016 IPR005215 Trigger factor GO:0015031 RJP_RS06650 afa4d0174e5eb96486c1803ff6f21a85 445 SUPERFAMILY SSF109998 249 434 4.05E-34 T 25-04-2016 IPR027304 Trigger factor/SurA domain RJP_RS06650 afa4d0174e5eb96486c1803ff6f21a85 445 PANTHER PTHR30560 1 434 1.5E-84 T 25-04-2016 RJP_RS06650 afa4d0174e5eb96486c1803ff6f21a85 445 Pfam PF05697 Bacterial trigger factor protein (TF) 1 144 1.3E-33 T 25-04-2016 IPR008881 Trigger factor, ribosome-binding, bacterial GO:0006457|GO:0015031 RJP_RS06650 afa4d0174e5eb96486c1803ff6f21a85 445 Gene3D G3DSA:3.30.70.1050 1 118 5.1E-31 T 25-04-2016 IPR008881 Trigger factor, ribosome-binding, bacterial GO:0006457|GO:0015031 RJP_RS06650 afa4d0174e5eb96486c1803ff6f21a85 445 Pfam PF05698 Bacterial trigger factor protein (TF) C-terminus 261 415 3.8E-35 T 25-04-2016 IPR008880 Trigger factor, C-terminal GO:0006457|GO:0015031 RJP_RS06650 afa4d0174e5eb96486c1803ff6f21a85 445 Gene3D G3DSA:3.10.50.40 151 215 3.3E-7 T 25-04-2016 RJP_RS06650 afa4d0174e5eb96486c1803ff6f21a85 445 TIGRFAM TIGR00115 tig: trigger factor 15 414 2.0E-118 T 25-04-2016 IPR005215 Trigger factor GO:0015031 RJP_RS06650 afa4d0174e5eb96486c1803ff6f21a85 445 PIRSF PIRSF003095 1 438 2.2E-114 T 25-04-2016 IPR005215 Trigger factor GO:0015031 RJP_RS06650 afa4d0174e5eb96486c1803ff6f21a85 445 Gene3D G3DSA:1.10.3120.10 216 391 2.5E-43 T 25-04-2016 IPR008880 Trigger factor, C-terminal GO:0006457|GO:0015031 RJP_RS06650 afa4d0174e5eb96486c1803ff6f21a85 445 SUPERFAMILY SSF102735 1 130 5.62E-31 T 25-04-2016 IPR008881 Trigger factor, ribosome-binding, bacterial GO:0006457|GO:0015031 RJP_RS06650 afa4d0174e5eb96486c1803ff6f21a85 445 SUPERFAMILY SSF54534 88 242 3.14E-28 T 25-04-2016 RJP_RS05130 5e97b57c1fc3f888fab1b7ee101a0e09 435 Hamap MF_01465 Protein translocase subunit SecY [secY]. 5 426 28.277 T 25-04-2016 IPR026593 Protein translocase subunit SecY RJP_RS05130 5e97b57c1fc3f888fab1b7ee101a0e09 435 Pfam PF00344 SecY translocase 70 410 1.5E-109 T 25-04-2016 IPR002208 SecY/SEC61-alpha family GO:0015031|GO:0016020 Reactome: REACT_15380 RJP_RS05130 5e97b57c1fc3f888fab1b7ee101a0e09 435 PANTHER PTHR10906 12 432 1.9E-176 T 25-04-2016 IPR002208 SecY/SEC61-alpha family GO:0015031|GO:0016020 Reactome: REACT_15380 RJP_RS05130 5e97b57c1fc3f888fab1b7ee101a0e09 435 SUPERFAMILY SSF103491 11 417 7.72E-122 T 25-04-2016 IPR023201 SecY subunit domain RJP_RS05130 5e97b57c1fc3f888fab1b7ee101a0e09 435 TIGRFAM TIGR00967 3a0501s007: preprotein translocase, SecY subunit 16 422 1.6E-119 T 25-04-2016 IPR002208 SecY/SEC61-alpha family GO:0015031|GO:0016020 Reactome: REACT_15380 RJP_RS05130 5e97b57c1fc3f888fab1b7ee101a0e09 435 PANTHER PTHR10906:SF2 12 432 1.9E-176 T 25-04-2016 RJP_RS05130 5e97b57c1fc3f888fab1b7ee101a0e09 435 ProSitePatterns PS00755 Protein secY signature 1. 70 89 - T 25-04-2016 IPR030659 SecY conserved site RJP_RS05130 5e97b57c1fc3f888fab1b7ee101a0e09 435 PRINTS PR00303 Preprotein translocase SecY subunit signature 17 35 2.0E-95 T 25-04-2016 RJP_RS05130 5e97b57c1fc3f888fab1b7ee101a0e09 435 PRINTS PR00303 Preprotein translocase SecY subunit signature 175 198 2.0E-95 T 25-04-2016 RJP_RS05130 5e97b57c1fc3f888fab1b7ee101a0e09 435 PRINTS PR00303 Preprotein translocase SecY subunit signature 267 286 2.0E-95 T 25-04-2016 RJP_RS05130 5e97b57c1fc3f888fab1b7ee101a0e09 435 PRINTS PR00303 Preprotein translocase SecY subunit signature 395 413 2.0E-95 T 25-04-2016 RJP_RS05130 5e97b57c1fc3f888fab1b7ee101a0e09 435 PRINTS PR00303 Preprotein translocase SecY subunit signature 110 133 2.0E-95 T 25-04-2016 RJP_RS05130 5e97b57c1fc3f888fab1b7ee101a0e09 435 PRINTS PR00303 Preprotein translocase SecY subunit signature 308 330 2.0E-95 T 25-04-2016 RJP_RS05130 5e97b57c1fc3f888fab1b7ee101a0e09 435 PRINTS PR00303 Preprotein translocase SecY subunit signature 149 174 2.0E-95 T 25-04-2016 RJP_RS05130 5e97b57c1fc3f888fab1b7ee101a0e09 435 PRINTS PR00303 Preprotein translocase SecY subunit signature 363 381 2.0E-95 T 25-04-2016 RJP_RS05130 5e97b57c1fc3f888fab1b7ee101a0e09 435 PRINTS PR00303 Preprotein translocase SecY subunit signature 69 89 2.0E-95 T 25-04-2016 RJP_RS05130 5e97b57c1fc3f888fab1b7ee101a0e09 435 PIRSF PIRSF004557 3 434 1.3E-116 T 25-04-2016 IPR002208 SecY/SEC61-alpha family GO:0015031|GO:0016020 Reactome: REACT_15380 RJP_RS05130 5e97b57c1fc3f888fab1b7ee101a0e09 435 Gene3D G3DSA:1.10.3370.10 11 430 7.8E-150 T 25-04-2016 IPR023201 SecY subunit domain RJP_RS05130 5e97b57c1fc3f888fab1b7ee101a0e09 435 ProSitePatterns PS00756 Protein secY signature 2. 168 185 - T 25-04-2016 IPR030659 SecY conserved site RJP_RS01285 b051b6a601cceeb398be81510213f759 497 Gene3D G3DSA:2.40.10.10 125 234 2.0E-12 T 25-04-2016 RJP_RS01285 b051b6a601cceeb398be81510213f759 497 SUPERFAMILY SSF50156 279 349 1.14E-10 T 25-04-2016 IPR001478 PDZ domain GO:0005515 RJP_RS01285 b051b6a601cceeb398be81510213f759 497 PRINTS PR00834 HtrA/DegQ protease family signature 101 121 2.3E-12 T 25-04-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 RJP_RS01285 b051b6a601cceeb398be81510213f759 497 PRINTS PR00834 HtrA/DegQ protease family signature 144 168 2.3E-12 T 25-04-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 RJP_RS01285 b051b6a601cceeb398be81510213f759 497 PRINTS PR00834 HtrA/DegQ protease family signature 78 90 2.3E-12 T 25-04-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 RJP_RS01285 b051b6a601cceeb398be81510213f759 497 PRINTS PR00834 HtrA/DegQ protease family signature 293 305 2.3E-12 T 25-04-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 RJP_RS01285 b051b6a601cceeb398be81510213f759 497 SUPERFAMILY SSF50494 41 234 3.22E-32 T 25-04-2016 IPR009003 Peptidase S1, PA clan RJP_RS01285 b051b6a601cceeb398be81510213f759 497 Gene3D G3DSA:2.40.10.10 34 124 6.8E-19 T 25-04-2016 RJP_RS01285 b051b6a601cceeb398be81510213f759 497 Gene3D G3DSA:2.30.42.10 280 353 2.6E-11 T 25-04-2016 IPR001478 PDZ domain GO:0005515 RJP_RS01285 b051b6a601cceeb398be81510213f759 497 Pfam PF13365 Trypsin-like peptidase domain 68 206 8.8E-18 T 25-04-2016 RJP_RS01285 b051b6a601cceeb398be81510213f759 497 ProDom PD208586 PROTEASE SHOCK HYDROLASE SERINE HEAT 3.4.21.- FAMILY PROTEASE HTRA/DEGQ/DEGS EC:3.4.21.- 308 497 1.0E-106 T 25-04-2016 RJP_RS01285 b051b6a601cceeb398be81510213f759 497 PANTHER PTHR22939 41 339 4.9E-33 T 25-04-2016 RJP_RS01285 b051b6a601cceeb398be81510213f759 497 Pfam PF13180 PDZ domain 277 344 1.7E-8 T 25-04-2016 IPR001478 PDZ domain GO:0005515 RJP_RS03230 d6b02b60a39698f537fd58c8d3d58505 255 Hamap MF_00361 NAD kinase [nadK]. 4 255 20.873 T 25-04-2016 IPR002504 NAD kinase GO:0003951|GO:0006741|GO:0008152 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269 RJP_RS03230 d6b02b60a39698f537fd58c8d3d58505 255 SUPERFAMILY SSF111331 26 240 3.79E-52 T 25-04-2016 IPR016064 NAD kinase/diacylglycerol kinase-like domain RJP_RS03230 d6b02b60a39698f537fd58c8d3d58505 255 Gene3D G3DSA:3.40.50.10330 23 110 1.7E-17 T 25-04-2016 IPR017438 Inorganic polyphosphate/ATP-NAD kinase, domain 1 GO:0003951|GO:0008152 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269 RJP_RS03230 d6b02b60a39698f537fd58c8d3d58505 255 Pfam PF01513 ATP-NAD kinase 33 181 5.3E-19 T 25-04-2016 IPR002504 NAD kinase GO:0003951|GO:0006741|GO:0008152 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269 RJP_RS03230 d6b02b60a39698f537fd58c8d3d58505 255 Gene3D G3DSA:2.60.200.30 111 225 2.0E-27 T 25-04-2016 IPR017437 ATP-NAD kinase, PpnK-type, all-beta GO:0003951|GO:0008152|GO:0019674 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269 RJP_RS03230 d6b02b60a39698f537fd58c8d3d58505 255 PANTHER PTHR20275 18 249 1.4E-77 T 25-04-2016 IPR002504 NAD kinase GO:0003951|GO:0006741|GO:0008152 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269 RJP_RS03230 d6b02b60a39698f537fd58c8d3d58505 255 PANTHER PTHR20275:SF7 18 249 1.4E-77 T 25-04-2016 RJP_RS04720 5b11a086ca4c00d7691cc20880ab30ad 513 Gene3D G3DSA:3.40.50.620 5 69 1.3E-51 T 25-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold RJP_RS04720 5b11a086ca4c00d7691cc20880ab30ad 513 Gene3D G3DSA:3.40.50.620 184 233 1.3E-51 T 25-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold RJP_RS04720 5b11a086ca4c00d7691cc20880ab30ad 513 PRINTS PR00987 Glutamyl-tRNA synthetase signature 37 50 7.0E-26 T 25-04-2016 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 Reactome: REACT_71 RJP_RS04720 5b11a086ca4c00d7691cc20880ab30ad 513 PRINTS PR00987 Glutamyl-tRNA synthetase signature 182 192 7.0E-26 T 25-04-2016 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 Reactome: REACT_71 RJP_RS04720 5b11a086ca4c00d7691cc20880ab30ad 513 PRINTS PR00987 Glutamyl-tRNA synthetase signature 22 33 7.0E-26 T 25-04-2016 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 Reactome: REACT_71 RJP_RS04720 5b11a086ca4c00d7691cc20880ab30ad 513 PRINTS PR00987 Glutamyl-tRNA synthetase signature 8 20 7.0E-26 T 25-04-2016 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 Reactome: REACT_71 RJP_RS04720 5b11a086ca4c00d7691cc20880ab30ad 513 PRINTS PR00987 Glutamyl-tRNA synthetase signature 198 206 7.0E-26 T 25-04-2016 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 Reactome: REACT_71 RJP_RS04720 5b11a086ca4c00d7691cc20880ab30ad 513 Gene3D G3DSA:3.90.800.10 70 183 7.9E-30 T 25-04-2016 RJP_RS04720 5b11a086ca4c00d7691cc20880ab30ad 513 PANTHER PTHR11451 3 337 8.4E-86 T 25-04-2016 RJP_RS04720 5b11a086ca4c00d7691cc20880ab30ad 513 PANTHER PTHR11451 500 513 8.4E-86 T 25-04-2016 RJP_RS04720 5b11a086ca4c00d7691cc20880ab30ad 513 Gene3D G3DSA:1.10.10.350 417 511 4.8E-25 T 25-04-2016 IPR020751 Aminoacyl-tRNA synthetase, class I, anticodon-binding domain, subdomain 2 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188 RJP_RS04720 5b11a086ca4c00d7691cc20880ab30ad 513 Pfam PF00749 tRNA synthetases class I (E and Q), catalytic domain 5 307 1.1E-94 T 25-04-2016 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain GO:0005524|GO:0016876|GO:0043039 Reactome: REACT_71 RJP_RS04720 5b11a086ca4c00d7691cc20880ab30ad 513 TIGRFAM TIGR00464 gltX_bact: glutamate--tRNA ligase 5 366 9.2E-138 T 25-04-2016 IPR004527 Glutamate-tRNA ligase, bacterial/mitochondrial GO:0000166|GO:0004818|GO:0005524|GO:0005737|GO:0006424 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188 RJP_RS04720 5b11a086ca4c00d7691cc20880ab30ad 513 Gene3D G3DSA:1.10.1160.10 236 317 8.3E-31 T 25-04-2016 IPR020061 Glutamyl/glutaminyl-tRNA synthetase, class Ib, alpha-bundle domain GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0006418 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188|Reactome: REACT_71 RJP_RS04720 5b11a086ca4c00d7691cc20880ab30ad 513 Hamap MF_00022_B Glutamate--tRNA ligase [gltX]. 5 513 30.642 T 25-04-2016 IPR004527 Glutamate-tRNA ligase, bacterial/mitochondrial GO:0000166|GO:0004818|GO:0005524|GO:0005737|GO:0006424 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188 RJP_RS04720 5b11a086ca4c00d7691cc20880ab30ad 513 SUPERFAMILY SSF52374 5 299 4.02E-106 T 25-04-2016 RJP_RS04720 5b11a086ca4c00d7691cc20880ab30ad 513 SUPERFAMILY SSF48163 396 511 2.7E-26 T 25-04-2016 IPR008925 Aminoacyl-tRNA synthetase, class I, anticodon-binding GO:0000049 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188 RJP_RS04720 5b11a086ca4c00d7691cc20880ab30ad 513 SUPERFAMILY SSF48163 282 364 2.7E-26 T 25-04-2016 IPR008925 Aminoacyl-tRNA synthetase, class I, anticodon-binding GO:0000049 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188 RJP_RS04720 5b11a086ca4c00d7691cc20880ab30ad 513 TIGRFAM TIGR01045 RPE1: rickettsial palindromic element RPE1 domain 337 379 3.5E-22 T 25-04-2016 IPR005728 Rickettsial palindromic element RJP_RS04720 5b11a086ca4c00d7691cc20880ab30ad 513 PANTHER PTHR11451:SF41 3 337 8.4E-86 T 25-04-2016 RJP_RS04720 5b11a086ca4c00d7691cc20880ab30ad 513 PANTHER PTHR11451:SF41 500 513 8.4E-86 T 25-04-2016 RJP_RS00455 f406afb44db6f4f5f57fc3784fdf026c 83 SUPERFAMILY SSF53335 15 83 1.05E-11 T 25-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RJP_RS00455 f406afb44db6f4f5f57fc3784fdf026c 83 Gene3D G3DSA:3.40.50.150 15 82 1.5E-11 T 25-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RJP_RS00455 f406afb44db6f4f5f57fc3784fdf026c 83 Pfam PF13489 Methyltransferase domain 34 82 2.2E-6 T 25-04-2016 RJP_RS03430 bdf60e04b91ccff40e9b632b08989ff4 607 PANTHER PTHR11573 24 607 5.0E-226 T 25-04-2016 RJP_RS03430 bdf60e04b91ccff40e9b632b08989ff4 607 Pfam PF02867 Ribonucleotide reductase, barrel domain 89 408 7.4E-75 T 25-04-2016 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227 RJP_RS03430 bdf60e04b91ccff40e9b632b08989ff4 607 Pfam PF02867 Ribonucleotide reductase, barrel domain 418 563 1.1E-35 T 25-04-2016 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227 RJP_RS03430 bdf60e04b91ccff40e9b632b08989ff4 607 PRINTS PR01183 Ribonucleotide reductase large chain signature 381 404 5.5E-18 T 25-04-2016 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227 RJP_RS03430 bdf60e04b91ccff40e9b632b08989ff4 607 PRINTS PR01183 Ribonucleotide reductase large chain signature 162 181 5.5E-18 T 25-04-2016 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227 RJP_RS03430 bdf60e04b91ccff40e9b632b08989ff4 607 PRINTS PR01183 Ribonucleotide reductase large chain signature 353 375 5.5E-18 T 25-04-2016 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227 RJP_RS03430 bdf60e04b91ccff40e9b632b08989ff4 607 PRINTS PR01183 Ribonucleotide reductase large chain signature 274 285 5.5E-18 T 25-04-2016 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227 RJP_RS03430 bdf60e04b91ccff40e9b632b08989ff4 607 SUPERFAMILY SSF51998 497 568 1.53E-134 T 25-04-2016 RJP_RS03430 bdf60e04b91ccff40e9b632b08989ff4 607 SUPERFAMILY SSF51998 87 466 1.53E-134 T 25-04-2016 RJP_RS03430 bdf60e04b91ccff40e9b632b08989ff4 607 Pfam PF00317 Ribonucleotide reductase, all-alpha domain 21 85 2.5E-13 T 25-04-2016 IPR013509 Ribonucleotide reductase large subunit, N-terminal GO:0004748|GO:0005524|GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|UniPathway: UPA00326 RJP_RS03430 bdf60e04b91ccff40e9b632b08989ff4 607 Gene3D G3DSA:3.20.70.20 8 462 3.3E-63 T 25-04-2016 RJP_RS03430 bdf60e04b91ccff40e9b632b08989ff4 607 Gene3D G3DSA:3.20.70.20 523 566 3.3E-63 T 25-04-2016 RJP_RS03430 bdf60e04b91ccff40e9b632b08989ff4 607 SUPERFAMILY SSF48168 12 84 1.1E-12 T 25-04-2016 IPR008926 Ribonucleotide reductase R1 subunit, N-terminal KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|UniPathway: UPA00326 RJP_RS06765 76dbb4947e19e168beddf995c6c8ee62 595 Hamap MF_00974 DNA primase [dnaG]. 2 573 26.211 T 25-04-2016 IPR030846 DNA primase DnaG, bacteria GO:0003896|GO:0006269|GO:0008270 RJP_RS06765 76dbb4947e19e168beddf995c6c8ee62 595 PIRSF PIRSF002811 1 586 9.7E-170 T 25-04-2016 IPR030846 DNA primase DnaG, bacteria GO:0003896|GO:0006269|GO:0008270 RJP_RS06765 76dbb4947e19e168beddf995c6c8ee62 595 Gene3D G3DSA:3.90.980.10 112 231 1.1E-35 T 25-04-2016 IPR013264 DNA primase, catalytic core, N-terminal RJP_RS06765 76dbb4947e19e168beddf995c6c8ee62 595 Pfam PF08275 DNA primase catalytic core, N-terminal domain 125 242 4.2E-36 T 25-04-2016 IPR013264 DNA primase, catalytic core, N-terminal RJP_RS06765 76dbb4947e19e168beddf995c6c8ee62 595 Gene3D G3DSA:3.40.1360.10 232 356 2.5E-41 T 25-04-2016 RJP_RS06765 76dbb4947e19e168beddf995c6c8ee62 595 SUPERFAMILY SSF57783 1 97 2.04E-29 T 25-04-2016 RJP_RS06765 76dbb4947e19e168beddf995c6c8ee62 595 Gene3D G3DSA:3.90.580.10 2 97 7.8E-32 T 25-04-2016 IPR002694 Zinc finger, CHC2-type GO:0003677|GO:0003896|GO:0006260|GO:0008270 RJP_RS06765 76dbb4947e19e168beddf995c6c8ee62 595 SUPERFAMILY SSF56731 112 410 2.35E-96 T 25-04-2016 RJP_RS06765 76dbb4947e19e168beddf995c6c8ee62 595 TIGRFAM TIGR01391 dnaG: DNA primase 3 409 8.3E-141 T 25-04-2016 IPR006295 DNA primase, DnaG GO:0003896|GO:0006269 RJP_RS06765 76dbb4947e19e168beddf995c6c8ee62 595 Pfam PF01807 CHC2 zinc finger 5 97 5.3E-35 T 25-04-2016 IPR002694 Zinc finger, CHC2-type GO:0003677|GO:0003896|GO:0006260|GO:0008270 RJP_RS06765 76dbb4947e19e168beddf995c6c8ee62 595 SMART SM00493 250 321 2.3E-14 T 25-04-2016 IPR006171 Toprim domain RJP_RS06765 76dbb4947e19e168beddf995c6c8ee62 595 Pfam PF13662 Toprim domain 253 318 2.9E-16 T 25-04-2016 IPR006171 Toprim domain RJP_RS06765 76dbb4947e19e168beddf995c6c8ee62 595 PANTHER PTHR30313 1 591 1.3E-112 T 25-04-2016 RJP_RS06765 76dbb4947e19e168beddf995c6c8ee62 595 SMART SM00400 34 88 1.7E-34 T 25-04-2016 IPR002694 Zinc finger, CHC2-type GO:0003677|GO:0003896|GO:0006260|GO:0008270 RJP_RS02370 55397bb548c78394bd85b2dd8c62dfaf 446 SUPERFAMILY SSF53756 3 331 3.08E-28 T 25-04-2016 RJP_RS02370 55397bb548c78394bd85b2dd8c62dfaf 446 Pfam PF02684 Lipid-A-disaccharide synthetase 4 379 4.9E-128 T 25-04-2016 IPR003835 Glycosyl transferase, family 19 GO:0008915|GO:0009245 KEGG: 00500+2.4.1.18|KEGG: 00540+2.4.1.182|MetaCyc: PWY-5067|MetaCyc: PWY-622|UniPathway: UPA00359 RJP_RS02370 55397bb548c78394bd85b2dd8c62dfaf 446 Gene3D G3DSA:3.40.50.2000 172 298 2.3E-7 T 25-04-2016 RJP_RS02370 55397bb548c78394bd85b2dd8c62dfaf 446 TIGRFAM TIGR03775 RPE3: rickettsial palindromic element RPE3 domain 379 421 4.1E-20 T 25-04-2016 IPR022437 Rickettsia palindromic element RPE3 RJP_RS02370 55397bb548c78394bd85b2dd8c62dfaf 446 PANTHER PTHR30372 3 413 1.3E-79 T 25-04-2016 RJP_RS02370 55397bb548c78394bd85b2dd8c62dfaf 446 Hamap MF_00392 Lipid-A-disaccharide synthase [lpxB]. 1 389 35.604 T 25-04-2016 IPR003835 Glycosyl transferase, family 19 GO:0008915|GO:0009245 KEGG: 00500+2.4.1.18|KEGG: 00540+2.4.1.182|MetaCyc: PWY-5067|MetaCyc: PWY-622|UniPathway: UPA00359 RJP_RS02370 55397bb548c78394bd85b2dd8c62dfaf 446 TIGRFAM TIGR00215 lpxB: lipid-A-disaccharide synthase 4 375 3.4E-67 T 25-04-2016 IPR003835 Glycosyl transferase, family 19 GO:0008915|GO:0009245 KEGG: 00500+2.4.1.18|KEGG: 00540+2.4.1.182|MetaCyc: PWY-5067|MetaCyc: PWY-622|UniPathway: UPA00359 RJP_RS00370 6a29acd7931c9d700cbcf83eb619b090 121 Gene3D G3DSA:3.30.70.60 1 103 1.5E-32 T 25-04-2016 IPR014717 Translation elongation factor EF1B/ribosomal protein S6 RJP_RS00370 6a29acd7931c9d700cbcf83eb619b090 121 PANTHER PTHR21011 1 106 8.4E-24 T 25-04-2016 RJP_RS00370 6a29acd7931c9d700cbcf83eb619b090 121 Pfam PF01250 Ribosomal protein S6 4 91 6.0E-26 T 25-04-2016 IPR000529 Ribosomal protein S6 GO:0003735|GO:0005840|GO:0006412|GO:0019843 RJP_RS00370 6a29acd7931c9d700cbcf83eb619b090 121 TIGRFAM TIGR00166 S6: ribosomal protein bS6 2 94 1.2E-22 T 25-04-2016 IPR000529 Ribosomal protein S6 GO:0003735|GO:0005840|GO:0006412|GO:0019843 RJP_RS00370 6a29acd7931c9d700cbcf83eb619b090 121 SUPERFAMILY SSF54995 1 103 7.19E-31 T 25-04-2016 IPR000529 Ribosomal protein S6 GO:0003735|GO:0005840|GO:0006412|GO:0019843 RJP_RS00370 6a29acd7931c9d700cbcf83eb619b090 121 Hamap MF_00360 30S ribosomal protein S6 [rpsF]. 1 95 20.302 T 25-04-2016 IPR020814 Ribosomal protein S6, plastid/chloroplast GO:0003735|GO:0005840|GO:0006412|GO:0019843 RJP_RS06080 e5e167e41b7c55b9573f9660aeb496aa 384 Pfam PF13173 AAA domain 17 135 1.2E-25 T 25-04-2016 RJP_RS06080 e5e167e41b7c55b9573f9660aeb496aa 384 PANTHER PTHR33295 1 380 2.5E-93 T 25-04-2016 RJP_RS06080 e5e167e41b7c55b9573f9660aeb496aa 384 PANTHER PTHR33295:SF4 1 380 2.5E-93 T 25-04-2016 RJP_RS06080 e5e167e41b7c55b9573f9660aeb496aa 384 Gene3D G3DSA:3.40.50.300 3 126 3.4E-10 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RJP_RS06080 e5e167e41b7c55b9573f9660aeb496aa 384 SUPERFAMILY SSF52540 4 177 1.83E-18 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RJP_RS06080 e5e167e41b7c55b9573f9660aeb496aa 384 Pfam PF13635 Domain of unknown function (DUF4143) 172 328 6.7E-27 T 25-04-2016 IPR025420 Domain of unknown function DUF4143 RJP_RS03900 f8e761d07675cb22f044a10f9abb9c49 329 SUPERFAMILY SSF141986 150 195 1.11E-21 T 25-04-2016 IPR027461 LD-carboxypeptidase A, C-terminal domain RJP_RS03900 f8e761d07675cb22f044a10f9abb9c49 329 SUPERFAMILY SSF141986 222 314 1.11E-21 T 25-04-2016 IPR027461 LD-carboxypeptidase A, C-terminal domain RJP_RS03900 f8e761d07675cb22f044a10f9abb9c49 329 SUPERFAMILY SSF52317 4 160 8.7E-31 T 25-04-2016 IPR029062 Class I glutamine amidotransferase-like RJP_RS03900 f8e761d07675cb22f044a10f9abb9c49 329 Gene3D G3DSA:3.50.30.60 163 315 2.9E-36 T 25-04-2016 IPR027461 LD-carboxypeptidase A, C-terminal domain RJP_RS03900 f8e761d07675cb22f044a10f9abb9c49 329 Pfam PF02016 LD-carboxypeptidase 13 310 1.3E-54 T 25-04-2016 IPR003507 Peptidase family S66 RJP_RS03900 f8e761d07675cb22f044a10f9abb9c49 329 PANTHER PTHR30237:SF2 1 191 2.2E-37 T 25-04-2016 RJP_RS03900 f8e761d07675cb22f044a10f9abb9c49 329 PANTHER PTHR30237:SF2 219 328 2.2E-37 T 25-04-2016 RJP_RS03900 f8e761d07675cb22f044a10f9abb9c49 329 PANTHER PTHR30237 1 191 2.2E-37 T 25-04-2016 RJP_RS03900 f8e761d07675cb22f044a10f9abb9c49 329 PANTHER PTHR30237 219 328 2.2E-37 T 25-04-2016 RJP_RS03900 f8e761d07675cb22f044a10f9abb9c49 329 Gene3D G3DSA:3.40.50.10740 6 161 1.5E-35 T 25-04-2016 IPR027478 Murein tetrapeptide carboxypeptidase, N-terminal domain RJP_RS04375 0b3b97076b72915e823141d9ee2272ea 581 Pfam PF00805 Pentapeptide repeats (8 copies) 74 110 1.5E-5 T 25-04-2016 IPR001646 Pentapeptide repeat RJP_RS04375 0b3b97076b72915e823141d9ee2272ea 581 PANTHER PTHR14136 59 284 3.9E-24 T 25-04-2016 RJP_RS04375 0b3b97076b72915e823141d9ee2272ea 581 SUPERFAMILY SSF141571 473 579 1.26E-22 T 25-04-2016 RJP_RS04375 0b3b97076b72915e823141d9ee2272ea 581 SUPERFAMILY SSF141571 64 236 3.45E-30 T 25-04-2016 RJP_RS04375 0b3b97076b72915e823141d9ee2272ea 581 SUPERFAMILY SSF141571 331 431 1.28E-9 T 25-04-2016 RJP_RS04375 0b3b97076b72915e823141d9ee2272ea 581 SUPERFAMILY SSF141571 197 341 5.49E-16 T 25-04-2016 RJP_RS04375 0b3b97076b72915e823141d9ee2272ea 581 Pfam PF13599 Pentapeptide repeats (9 copies) 215 287 9.6E-8 T 25-04-2016 IPR001646 Pentapeptide repeat RJP_RS04375 0b3b97076b72915e823141d9ee2272ea 581 Pfam PF13599 Pentapeptide repeats (9 copies) 345 412 6.8E-7 T 25-04-2016 IPR001646 Pentapeptide repeat RJP_RS04375 0b3b97076b72915e823141d9ee2272ea 581 Pfam PF13599 Pentapeptide repeats (9 copies) 476 549 2.0E-9 T 25-04-2016 IPR001646 Pentapeptide repeat RJP_RS04375 0b3b97076b72915e823141d9ee2272ea 581 Pfam PF13599 Pentapeptide repeats (9 copies) 134 206 2.4E-11 T 25-04-2016 IPR001646 Pentapeptide repeat RJP_RS01475 60c62341091c315bc89a79b91659e69c 175 SUPERFAMILY SSF56420 3 172 2.22E-60 T 25-04-2016 IPR023635 Peptide deformylase RJP_RS01475 60c62341091c315bc89a79b91659e69c 175 Gene3D G3DSA:3.90.45.10 4 172 8.1E-62 T 25-04-2016 IPR023635 Peptide deformylase RJP_RS01475 60c62341091c315bc89a79b91659e69c 175 Pfam PF01327 Polypeptide deformylase 4 160 1.5E-53 T 25-04-2016 IPR023635 Peptide deformylase RJP_RS01475 60c62341091c315bc89a79b91659e69c 175 TIGRFAM TIGR00079 pept_deformyl: peptide deformylase 5 167 3.9E-51 T 25-04-2016 IPR000181 Formylmethionine deformylase GO:0005506|GO:0042586 RJP_RS01475 60c62341091c315bc89a79b91659e69c 175 PANTHER PTHR10458 1 173 1.1E-66 T 25-04-2016 IPR000181 Formylmethionine deformylase GO:0005506|GO:0042586 RJP_RS01475 60c62341091c315bc89a79b91659e69c 175 Hamap MF_00163 Peptide deformylase [def]. 2 170 30.427 T 25-04-2016 IPR000181 Formylmethionine deformylase GO:0005506|GO:0042586 RJP_RS01475 60c62341091c315bc89a79b91659e69c 175 PRINTS PR01576 Peptide deformylase signature 128 157 1.04E-34 T 25-04-2016 IPR000181 Formylmethionine deformylase GO:0005506|GO:0042586 RJP_RS01475 60c62341091c315bc89a79b91659e69c 175 PRINTS PR01576 Peptide deformylase signature 97 108 1.04E-34 T 25-04-2016 IPR000181 Formylmethionine deformylase GO:0005506|GO:0042586 RJP_RS01475 60c62341091c315bc89a79b91659e69c 175 PRINTS PR01576 Peptide deformylase signature 109 127 1.04E-34 T 25-04-2016 IPR000181 Formylmethionine deformylase GO:0005506|GO:0042586 RJP_RS01475 60c62341091c315bc89a79b91659e69c 175 PRINTS PR01576 Peptide deformylase signature 33 62 1.04E-34 T 25-04-2016 IPR000181 Formylmethionine deformylase GO:0005506|GO:0042586 RJP_RS01475 60c62341091c315bc89a79b91659e69c 175 PIRSF PIRSF004749 1 174 9.5E-55 T 25-04-2016 IPR000181 Formylmethionine deformylase GO:0005506|GO:0042586 RJP_RS06005 241e8c1c0a86cac2c60bd76930fe2b10 1583 PIRSF PIRSF036761 1 1583 0.0 T 25-04-2016 IPR007780 NAD-glutamate dehydrogenase, bacteria GO:0004352|GO:0019551 KEGG: 00220+1.4.1.2|KEGG: 00250+1.4.1.2|KEGG: 00430+1.4.1.2|KEGG: 00910+1.4.1.2|MetaCyc: PWY-5022|MetaCyc: PWY-6728|MetaCyc: PWY-7126 RJP_RS06005 241e8c1c0a86cac2c60bd76930fe2b10 1583 Pfam PF05088 Bacterial NAD-glutamate dehydrogenase 96 1574 0.0 T 25-04-2016 IPR028971 NAD-glutamate dehydrogenase GO:0004352|GO:0019551 KEGG: 00220+1.4.1.2|KEGG: 00250+1.4.1.2|KEGG: 00430+1.4.1.2|KEGG: 00910+1.4.1.2|MetaCyc: PWY-5022|MetaCyc: PWY-6728|MetaCyc: PWY-7126 RJP_RS06005 241e8c1c0a86cac2c60bd76930fe2b10 1583 SUPERFAMILY SSF53223 736 934 8.06E-21 T 25-04-2016 RJP_RS06005 241e8c1c0a86cac2c60bd76930fe2b10 1583 PANTHER PTHR11606 659 1076 0.0 T 25-04-2016 RJP_RS06005 241e8c1c0a86cac2c60bd76930fe2b10 1583 PANTHER PTHR11606 1101 1346 0.0 T 25-04-2016 RJP_RS06005 241e8c1c0a86cac2c60bd76930fe2b10 1583 PANTHER PTHR11606 97 152 0.0 T 25-04-2016 RJP_RS06005 241e8c1c0a86cac2c60bd76930fe2b10 1583 PANTHER PTHR11606 214 552 0.0 T 25-04-2016 RJP_RS06005 241e8c1c0a86cac2c60bd76930fe2b10 1583 SUPERFAMILY SSF51735 1062 1205 1.46E-27 T 25-04-2016 IPR016040 NAD(P)-binding domain RJP_RS06005 241e8c1c0a86cac2c60bd76930fe2b10 1583 SUPERFAMILY SSF51735 924 1026 1.46E-27 T 25-04-2016 IPR016040 NAD(P)-binding domain RJP_RS06005 241e8c1c0a86cac2c60bd76930fe2b10 1583 PANTHER PTHR11606:SF1 659 1076 0.0 T 25-04-2016 RJP_RS06005 241e8c1c0a86cac2c60bd76930fe2b10 1583 PANTHER PTHR11606:SF1 1101 1346 0.0 T 25-04-2016 RJP_RS06005 241e8c1c0a86cac2c60bd76930fe2b10 1583 PANTHER PTHR11606:SF1 97 152 0.0 T 25-04-2016 RJP_RS06005 241e8c1c0a86cac2c60bd76930fe2b10 1583 PANTHER PTHR11606:SF1 214 552 0.0 T 25-04-2016 RJP_RS06005 241e8c1c0a86cac2c60bd76930fe2b10 1583 Gene3D G3DSA:3.40.50.720 921 1032 8.6E-36 T 25-04-2016 IPR016040 NAD(P)-binding domain RJP_RS06005 241e8c1c0a86cac2c60bd76930fe2b10 1583 Gene3D G3DSA:3.40.50.720 1067 1184 8.6E-36 T 25-04-2016 IPR016040 NAD(P)-binding domain RJP_RS02305 5d07e191ec8d240313495c8d344c87f3 511 ProSitePatterns PS00543 HlyD family secretion proteins signature. 475 497 - T 25-04-2016 IPR006144 Secretion protein HlyD, conserved site GO:0008565|GO:0009306|GO:0016020 RJP_RS02305 5d07e191ec8d240313495c8d344c87f3 511 Gene3D G3DSA:2.40.50.100 352 387 2.4E-14 T 25-04-2016 RJP_RS02305 5d07e191ec8d240313495c8d344c87f3 511 Gene3D G3DSA:2.40.50.100 125 156 2.4E-14 T 25-04-2016 RJP_RS02305 5d07e191ec8d240313495c8d344c87f3 511 PANTHER PTHR30386:SF3 214 511 3.6E-110 T 25-04-2016 RJP_RS02305 5d07e191ec8d240313495c8d344c87f3 511 PANTHER PTHR30386:SF3 50 177 3.6E-110 T 25-04-2016 RJP_RS02305 5d07e191ec8d240313495c8d344c87f3 511 Pfam PF13533 Biotin-lipoyl like 132 160 3.4E-6 T 25-04-2016 RJP_RS02305 5d07e191ec8d240313495c8d344c87f3 511 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 367 388 1.0E-48 T 25-04-2016 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 RJP_RS02305 5d07e191ec8d240313495c8d344c87f3 511 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 400 424 1.0E-48 T 25-04-2016 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 RJP_RS02305 5d07e191ec8d240313495c8d344c87f3 511 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 490 510 1.0E-48 T 25-04-2016 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 RJP_RS02305 5d07e191ec8d240313495c8d344c87f3 511 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 134 154 1.0E-48 T 25-04-2016 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 RJP_RS02305 5d07e191ec8d240313495c8d344c87f3 511 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 424 447 1.0E-48 T 25-04-2016 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 RJP_RS02305 5d07e191ec8d240313495c8d344c87f3 511 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 475 490 1.0E-48 T 25-04-2016 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 RJP_RS02305 5d07e191ec8d240313495c8d344c87f3 511 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 92 115 1.0E-48 T 25-04-2016 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 RJP_RS02305 5d07e191ec8d240313495c8d344c87f3 511 PANTHER PTHR30386 214 511 3.6E-110 T 25-04-2016 RJP_RS02305 5d07e191ec8d240313495c8d344c87f3 511 PANTHER PTHR30386 50 177 3.6E-110 T 25-04-2016 RJP_RS02305 5d07e191ec8d240313495c8d344c87f3 511 TIGRFAM TIGR01843 type_I_hlyD: type I secretion membrane fusion protein, HlyD family 83 511 3.1E-152 T 25-04-2016 IPR010129 Type I secretion membrane fusion protein, HlyD family GO:0015031|GO:0016021 RJP_RS02305 5d07e191ec8d240313495c8d344c87f3 511 Pfam PF13437 HlyD family secretion protein 355 470 1.4E-18 T 25-04-2016 RJP_RS05640 92b3b0935d3ebb27de14ba311c1d0bfc 98 Gene3D G3DSA:1.10.1660.10 8 58 7.7E-4 T 25-04-2016 RJP_RS05640 92b3b0935d3ebb27de14ba311c1d0bfc 98 SUPERFAMILY SSF46955 9 76 6.41E-5 T 25-04-2016 IPR009061 Putative DNA-binding domain RJP_RS05640 92b3b0935d3ebb27de14ba311c1d0bfc 98 Pfam PF13411 MerR HTH family regulatory protein 11 58 1.1E-5 T 25-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 RJP_RS05735 84f8444828a06a4cc43584fd6ce467a2 270 PANTHER PTHR39962:SF1 5 267 4.0E-52 T 25-04-2016 RJP_RS05735 84f8444828a06a4cc43584fd6ce467a2 270 Pfam PF06230 Protein of unknown function (DUF1009) 57 267 5.1E-61 T 25-04-2016 IPR010415 Protein of unknown function DUF1009 RJP_RS05735 84f8444828a06a4cc43584fd6ce467a2 270 PANTHER PTHR39962 5 267 4.0E-52 T 25-04-2016 RJP_RS05210 631bf2aaac3836aec0387c058ba3d121 92 PANTHER PTHR11880 1 88 9.1E-45 T 25-04-2016 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 RJP_RS05210 631bf2aaac3836aec0387c058ba3d121 92 TIGRFAM TIGR01050 rpsS_bact: ribosomal protein uS19 1 91 8.8E-44 T 25-04-2016 IPR005732 Ribosomal protein S19, bacterial-type GO:0003735|GO:0006412|GO:0015935 RJP_RS05210 631bf2aaac3836aec0387c058ba3d121 92 SUPERFAMILY SSF54570 3 84 5.62E-34 T 25-04-2016 IPR023575 Ribosomal protein S19, superfamily GO:0003735|GO:0005840|GO:0006412 RJP_RS05210 631bf2aaac3836aec0387c058ba3d121 92 ProSitePatterns PS00323 Ribosomal protein S19 signature. 53 77 - T 25-04-2016 IPR020934 Ribosomal protein S19 conserved site GO:0003723 RJP_RS05210 631bf2aaac3836aec0387c058ba3d121 92 Gene3D G3DSA:3.30.860.10 1 91 7.0E-40 T 25-04-2016 IPR023575 Ribosomal protein S19, superfamily GO:0003735|GO:0005840|GO:0006412 RJP_RS05210 631bf2aaac3836aec0387c058ba3d121 92 Hamap MF_00531 30S ribosomal protein S19 [rpsS]. 1 89 24.083 T 25-04-2016 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 RJP_RS05210 631bf2aaac3836aec0387c058ba3d121 92 PRINTS PR00975 Ribosomal protein S19 family signature 65 80 8.3E-21 T 25-04-2016 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 RJP_RS05210 631bf2aaac3836aec0387c058ba3d121 92 PRINTS PR00975 Ribosomal protein S19 family signature 33 52 8.3E-21 T 25-04-2016 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 RJP_RS05210 631bf2aaac3836aec0387c058ba3d121 92 PRINTS PR00975 Ribosomal protein S19 family signature 53 65 8.3E-21 T 25-04-2016 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 RJP_RS05210 631bf2aaac3836aec0387c058ba3d121 92 PIRSF PIRSF002144 1 92 8.9E-32 T 25-04-2016 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 RJP_RS05210 631bf2aaac3836aec0387c058ba3d121 92 Pfam PF00203 Ribosomal protein S19 3 83 6.4E-35 T 25-04-2016 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 RJP_RS06570 5ce256f2a4a00f0d5d5f882d61a14930 233 Pfam PF00005 ABC transporter 22 150 2.0E-28 T 25-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 RJP_RS06570 5ce256f2a4a00f0d5d5f882d61a14930 233 SMART SM00382 30 201 5.9E-11 T 25-04-2016 IPR003593 AAA+ ATPase domain RJP_RS06570 5ce256f2a4a00f0d5d5f882d61a14930 233 Gene3D G3DSA:3.40.50.300 3 212 1.1E-55 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RJP_RS06570 5ce256f2a4a00f0d5d5f882d61a14930 233 SUPERFAMILY SSF52540 3 215 6.06E-54 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RJP_RS06570 5ce256f2a4a00f0d5d5f882d61a14930 233 PANTHER PTHR24220:SF466 7 231 6.1E-72 T 25-04-2016 RJP_RS06570 5ce256f2a4a00f0d5d5f882d61a14930 233 PANTHER PTHR24220 7 231 6.1E-72 T 25-04-2016 RJP_RS06570 5ce256f2a4a00f0d5d5f882d61a14930 233 ProSitePatterns PS00211 ABC transporters family signature. 123 137 - T 25-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 RJP_RS06475 11a9604c4c52e51b524779b9fba5edec 84 PANTHER PTHR36837 1 84 3.6E-25 T 25-04-2016 RJP_RS06475 11a9604c4c52e51b524779b9fba5edec 84 PANTHER PTHR36837:SF2 1 84 3.6E-25 T 25-04-2016 RJP_RS06475 11a9604c4c52e51b524779b9fba5edec 84 SUPERFAMILY SSF53474 3 84 3.43E-5 T 25-04-2016 IPR029058 Alpha/Beta hydrolase fold RJP_RS06350 372c733d858250435f20ff5e0e94d257 445 PANTHER PTHR11918:SF43 1 445 5.0E-182 T 25-04-2016 RJP_RS06350 372c733d858250435f20ff5e0e94d257 445 Pfam PF01938 TRAM domain 384 445 3.3E-12 T 25-04-2016 IPR002792 TRAM domain RJP_RS06350 372c733d858250435f20ff5e0e94d257 445 TIGRFAM TIGR00089 TIGR00089: radical SAM methylthiotransferase, MiaB/RimO family 4 442 8.1E-160 T 25-04-2016 IPR005839 Methylthiotransferase GO:0016740|GO:0043412|GO:0051539 RJP_RS06350 372c733d858250435f20ff5e0e94d257 445 ProSitePatterns PS01278 Methylthiotransferase radical SAM domain signature. 156 176 - T 25-04-2016 IPR020612 Methylthiotransferase, conserved site GO:0051539 RJP_RS06350 372c733d858250435f20ff5e0e94d257 445 Pfam PF00919 Uncharacterized protein family UPF0004 4 108 2.5E-29 T 25-04-2016 IPR013848 Methylthiotransferase, N-terminal GO:0003824|GO:0009451|GO:0051539 RJP_RS06350 372c733d858250435f20ff5e0e94d257 445 PANTHER PTHR11918 1 445 5.0E-182 T 25-04-2016 IPR023970 Methylthiotransferase/radical SAM-type protein RJP_RS06350 372c733d858250435f20ff5e0e94d257 445 Hamap MF_01864 tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase [miaB]. 3 445 70.663 T 25-04-2016 IPR006463 tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase MiaB GO:0005737|GO:0006400|GO:0016740|GO:0051539 RJP_RS06350 372c733d858250435f20ff5e0e94d257 445 SUPERFAMILY SSF102114 106 377 1.57E-59 T 25-04-2016 RJP_RS06350 372c733d858250435f20ff5e0e94d257 445 Pfam PF04055 Radical SAM superfamily 156 330 1.2E-29 T 25-04-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 RJP_RS06350 372c733d858250435f20ff5e0e94d257 445 SMART SM00729 152 372 3.0E-55 T 25-04-2016 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 RJP_RS06350 372c733d858250435f20ff5e0e94d257 445 Gene3D G3DSA:3.80.30.20 151 382 7.9E-74 T 25-04-2016 IPR023404 Radical SAM, alpha/beta horseshoe RJP_RS06350 372c733d858250435f20ff5e0e94d257 445 TIGRFAM TIGR01574 miaB-methiolase: tRNA-i(6)A37 thiotransferase enzyme MiaB 4 444 1.6E-155 T 25-04-2016 RJP_RS03365 2e8a920edf51176572dda69b49ea263b 340 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 109 117 3.2E-18 T 25-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 RJP_RS03365 2e8a920edf51176572dda69b49ea263b 340 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 203 219 3.2E-18 T 25-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 RJP_RS03365 2e8a920edf51176572dda69b49ea263b 340 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 5 27 3.2E-18 T 25-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 RJP_RS03365 2e8a920edf51176572dda69b49ea263b 340 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 148 172 3.2E-18 T 25-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 RJP_RS03365 2e8a920edf51176572dda69b49ea263b 340 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 5 294 2.3E-30 T 25-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RJP_RS03365 2e8a920edf51176572dda69b49ea263b 340 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 108 126 3.4E-18 T 25-04-2016 RJP_RS03365 2e8a920edf51176572dda69b49ea263b 340 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 6 25 3.4E-18 T 25-04-2016 RJP_RS03365 2e8a920edf51176572dda69b49ea263b 340 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 152 170 3.4E-18 T 25-04-2016 RJP_RS03365 2e8a920edf51176572dda69b49ea263b 340 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 266 288 3.4E-18 T 25-04-2016 RJP_RS03365 2e8a920edf51176572dda69b49ea263b 340 PANTHER PTHR22912 1 305 2.6E-94 T 25-04-2016 RJP_RS03365 2e8a920edf51176572dda69b49ea263b 340 Hamap MF_01685 Ferredoxin--NADP reductase. 3 329 40.558 T 25-04-2016 IPR022890 Ferredoxin--NADP reductase, type 2 GO:0004324|GO:0055114 KEGG: 00195+1.18.1.2|MetaCyc: PWY-101|MetaCyc: PWY-7230 RJP_RS03365 2e8a920edf51176572dda69b49ea263b 340 Gene3D G3DSA:3.50.50.60 3 123 7.5E-39 T 25-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RJP_RS03365 2e8a920edf51176572dda69b49ea263b 340 Gene3D G3DSA:3.50.50.60 247 320 7.5E-39 T 25-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RJP_RS03365 2e8a920edf51176572dda69b49ea263b 340 Gene3D G3DSA:3.50.50.60 124 242 1.9E-18 T 25-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RJP_RS03365 2e8a920edf51176572dda69b49ea263b 340 PANTHER PTHR22912:SF158 1 305 2.6E-94 T 25-04-2016 RJP_RS03365 2e8a920edf51176572dda69b49ea263b 340 SUPERFAMILY SSF51905 1 304 2.72E-40 T 25-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RJP_RS02660 e55f8b1bc8e979218275bf542f77d315 260 SUPERFAMILY SSF51735 7 255 3.38E-60 T 25-04-2016 IPR016040 NAD(P)-binding domain RJP_RS02660 e55f8b1bc8e979218275bf542f77d315 260 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 10 27 3.2E-12 T 25-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RJP_RS02660 e55f8b1bc8e979218275bf542f77d315 260 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 85 96 3.2E-12 T 25-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RJP_RS02660 e55f8b1bc8e979218275bf542f77d315 260 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 160 179 3.2E-12 T 25-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RJP_RS02660 e55f8b1bc8e979218275bf542f77d315 260 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 134 150 3.2E-12 T 25-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RJP_RS02660 e55f8b1bc8e979218275bf542f77d315 260 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 181 198 3.2E-12 T 25-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RJP_RS02660 e55f8b1bc8e979218275bf542f77d315 260 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 216 236 3.2E-12 T 25-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RJP_RS02660 e55f8b1bc8e979218275bf542f77d315 260 PANTHER PTHR24322:SF317 13 144 1.5E-47 T 25-04-2016 IPR014358 Enoyl-[acyl-carrier-protein] reductase (NADH) GO:0004318|GO:0006633|GO:0055114 KEGG: 00061+1.3.1.9|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWYG-321|UniPathway: UPA00094 RJP_RS02660 e55f8b1bc8e979218275bf542f77d315 260 PANTHER PTHR24322:SF317 160 192 1.5E-47 T 25-04-2016 IPR014358 Enoyl-[acyl-carrier-protein] reductase (NADH) GO:0004318|GO:0006633|GO:0055114 KEGG: 00061+1.3.1.9|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWYG-321|UniPathway: UPA00094 RJP_RS02660 e55f8b1bc8e979218275bf542f77d315 260 PIRSF PIRSF000094 3 260 2.1E-119 T 25-04-2016 IPR014358 Enoyl-[acyl-carrier-protein] reductase (NADH) GO:0004318|GO:0006633|GO:0055114 KEGG: 00061+1.3.1.9|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWYG-321|UniPathway: UPA00094 RJP_RS02660 e55f8b1bc8e979218275bf542f77d315 260 Gene3D G3DSA:3.40.50.720 4 255 2.2E-60 T 25-04-2016 IPR016040 NAD(P)-binding domain RJP_RS02660 e55f8b1bc8e979218275bf542f77d315 260 PANTHER PTHR24322 13 144 1.5E-47 T 25-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RJP_RS02660 e55f8b1bc8e979218275bf542f77d315 260 PANTHER PTHR24322 160 192 1.5E-47 T 25-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RJP_RS02660 e55f8b1bc8e979218275bf542f77d315 260 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 15 253 3.2E-82 T 25-04-2016 RJP_RS01825 12e50d591b6a9b07256291bf004cd92e 288 SUPERFAMILY SSF54211 1 126 7.97E-40 T 25-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold RJP_RS01825 12e50d591b6a9b07256291bf004cd92e 288 Gene3D G3DSA:3.30.230.20 2 126 7.8E-44 T 25-04-2016 IPR015870 UDP-3-O-acyl N-acetylglucosamine deacetylase, N-terminal GO:0008759|GO:0009245 KEGG: 00540+3.5.1.108|KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|UniPathway: UPA00359 RJP_RS01825 12e50d591b6a9b07256291bf004cd92e 288 Hamap MF_00388 UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase [lpxC]. 1 279 44.075 T 25-04-2016 IPR004463 UDP-3-O-acyl N-acetylglucosamine deacetylase GO:0008759|GO:0009245 KEGG: 00540+3.5.1.108|KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|UniPathway: UPA00359 RJP_RS01825 12e50d591b6a9b07256291bf004cd92e 288 Pfam PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase 3 274 9.6E-98 T 25-04-2016 IPR004463 UDP-3-O-acyl N-acetylglucosamine deacetylase GO:0008759|GO:0009245 KEGG: 00540+3.5.1.108|KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|UniPathway: UPA00359 RJP_RS01825 12e50d591b6a9b07256291bf004cd92e 288 SUPERFAMILY SSF54211 134 276 9.86E-43 T 25-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold RJP_RS01825 12e50d591b6a9b07256291bf004cd92e 288 Gene3D G3DSA:3.30.1700.10 129 280 1.7E-50 T 25-04-2016 IPR011334 UDP-3-O-acyl N-acetylglucosamine deacetylase, C-terminal GO:0008759|GO:0009245 KEGG: 00540+3.5.1.108|KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|UniPathway: UPA00359 RJP_RS01825 12e50d591b6a9b07256291bf004cd92e 288 PANTHER PTHR33694:SF1 1 287 3.5E-98 T 25-04-2016 RJP_RS01825 12e50d591b6a9b07256291bf004cd92e 288 PANTHER PTHR33694 1 287 3.5E-98 T 25-04-2016 RJP_RS01825 12e50d591b6a9b07256291bf004cd92e 288 TIGRFAM TIGR00325 lpxC: UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase 1 285 6.7E-93 T 25-04-2016 IPR004463 UDP-3-O-acyl N-acetylglucosamine deacetylase GO:0008759|GO:0009245 KEGG: 00540+3.5.1.108|KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|UniPathway: UPA00359 RJP_RS03285 d313950a622f1bd524dc040f6e316cdd 281 SUPERFAMILY SSF53448 6 230 6.65E-63 T 25-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases RJP_RS03285 d313950a622f1bd524dc040f6e316cdd 281 Pfam PF00535 Glycosyl transferase family 2 9 161 9.8E-31 T 25-04-2016 IPR001173 Glycosyltransferase 2-like RJP_RS03285 d313950a622f1bd524dc040f6e316cdd 281 PANTHER PTHR22916 4 232 3.3E-57 T 25-04-2016 RJP_RS03285 d313950a622f1bd524dc040f6e316cdd 281 PANTHER PTHR22916:SF28 4 232 3.3E-57 T 25-04-2016 RJP_RS03285 d313950a622f1bd524dc040f6e316cdd 281 Gene3D G3DSA:3.90.550.10 6 228 1.0E-59 T 25-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases RJP_RS03540 45b934ec63f84cb095f1a9c437cc8c48 183 Pfam PF01327 Polypeptide deformylase 9 158 5.3E-43 T 25-04-2016 IPR023635 Peptide deformylase RJP_RS03540 45b934ec63f84cb095f1a9c437cc8c48 183 Gene3D G3DSA:3.90.45.10 9 170 2.2E-49 T 25-04-2016 IPR023635 Peptide deformylase RJP_RS03540 45b934ec63f84cb095f1a9c437cc8c48 183 PIRSF PIRSF004749 1 181 6.7E-53 T 25-04-2016 IPR000181 Formylmethionine deformylase GO:0005506|GO:0042586 RJP_RS03540 45b934ec63f84cb095f1a9c437cc8c48 183 SUPERFAMILY SSF56420 8 170 6.93E-49 T 25-04-2016 IPR023635 Peptide deformylase RJP_RS03540 45b934ec63f84cb095f1a9c437cc8c48 183 PRINTS PR01576 Peptide deformylase signature 126 155 2.2E-25 T 25-04-2016 IPR000181 Formylmethionine deformylase GO:0005506|GO:0042586 RJP_RS03540 45b934ec63f84cb095f1a9c437cc8c48 183 PRINTS PR01576 Peptide deformylase signature 37 66 2.2E-25 T 25-04-2016 IPR000181 Formylmethionine deformylase GO:0005506|GO:0042586 RJP_RS03540 45b934ec63f84cb095f1a9c437cc8c48 183 PRINTS PR01576 Peptide deformylase signature 107 125 2.2E-25 T 25-04-2016 IPR000181 Formylmethionine deformylase GO:0005506|GO:0042586 RJP_RS03540 45b934ec63f84cb095f1a9c437cc8c48 183 PRINTS PR01576 Peptide deformylase signature 95 106 2.2E-25 T 25-04-2016 IPR000181 Formylmethionine deformylase GO:0005506|GO:0042586 RJP_RS03540 45b934ec63f84cb095f1a9c437cc8c48 183 TIGRFAM TIGR00079 pept_deformyl: peptide deformylase 9 165 2.4E-42 T 25-04-2016 IPR000181 Formylmethionine deformylase GO:0005506|GO:0042586 RJP_RS03540 45b934ec63f84cb095f1a9c437cc8c48 183 PANTHER PTHR10458 5 167 7.5E-55 T 25-04-2016 IPR000181 Formylmethionine deformylase GO:0005506|GO:0042586 RJP_RS03540 45b934ec63f84cb095f1a9c437cc8c48 183 Hamap MF_00163 Peptide deformylase [def]. 6 168 24.072 T 25-04-2016 IPR000181 Formylmethionine deformylase GO:0005506|GO:0042586 RJP_RS00510 f2a97548abe5bfff55ea8485f70cb3cd 286 PANTHER PTHR33375 7 285 6.3E-75 T 25-04-2016 RJP_RS00510 f2a97548abe5bfff55ea8485f70cb3cd 286 SUPERFAMILY SSF109709 106 213 1.46E-31 T 25-04-2016 RJP_RS00510 f2a97548abe5bfff55ea8485f70cb3cd 286 Gene3D G3DSA:3.90.1530.10 26 120 2.3E-34 T 25-04-2016 RJP_RS00510 f2a97548abe5bfff55ea8485f70cb3cd 286 TIGRFAM TIGR00180 parB_part: ParB/RepB/Spo0J family partition protein 27 188 7.3E-49 T 25-04-2016 IPR004437 ParB/RepB/Spo0J partition protein family GO:0003677 RJP_RS00510 f2a97548abe5bfff55ea8485f70cb3cd 286 SMART SM00470 28 114 4.8E-35 T 25-04-2016 IPR003115 ParB/Sulfiredoxin RJP_RS00510 f2a97548abe5bfff55ea8485f70cb3cd 286 SUPERFAMILY SSF110849 28 116 7.85E-26 T 25-04-2016 IPR003115 ParB/Sulfiredoxin RJP_RS00510 f2a97548abe5bfff55ea8485f70cb3cd 286 Pfam PF02195 ParB-like nuclease domain 30 114 6.9E-27 T 25-04-2016 IPR003115 ParB/Sulfiredoxin RJP_RS03260 bb2a9636e64d4dabf477998d9b97f670 310 Gene3D G3DSA:3.50.50.60 232 304 3.1E-7 T 25-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RJP_RS03260 bb2a9636e64d4dabf477998d9b97f670 310 ProSitePatterns PS00573 Pyridine nucleotide-disulphide oxidoreductases class-II active site. 135 155 - T 25-04-2016 IPR008255 Pyridine nucleotide-disulphide oxidoreductase, class-II, active site GO:0016491|GO:0055114 RJP_RS03260 bb2a9636e64d4dabf477998d9b97f670 310 TIGRFAM TIGR01292 TRX_reduct: thioredoxin-disulfide reductase 6 308 4.9E-131 T 25-04-2016 IPR005982 Thioredoxin reductase GO:0004791|GO:0005737|GO:0019430|GO:0055114 KEGG: 00240+1.8.1.9|KEGG: 00450+1.8.1.9 RJP_RS03260 bb2a9636e64d4dabf477998d9b97f670 310 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 261 283 2.9E-38 T 25-04-2016 RJP_RS03260 bb2a9636e64d4dabf477998d9b97f670 310 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 7 26 2.9E-38 T 25-04-2016 RJP_RS03260 bb2a9636e64d4dabf477998d9b97f670 310 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 147 165 2.9E-38 T 25-04-2016 RJP_RS03260 bb2a9636e64d4dabf477998d9b97f670 310 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 105 123 2.9E-38 T 25-04-2016 RJP_RS03260 bb2a9636e64d4dabf477998d9b97f670 310 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 234 250 2.9E-38 T 25-04-2016 RJP_RS03260 bb2a9636e64d4dabf477998d9b97f670 310 Gene3D G3DSA:3.50.50.60 3 118 7.1E-33 T 25-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RJP_RS03260 bb2a9636e64d4dabf477998d9b97f670 310 SUPERFAMILY SSF51905 1 308 7.45E-50 T 25-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RJP_RS03260 bb2a9636e64d4dabf477998d9b97f670 310 PANTHER PTHR22912 1 309 3.0E-159 T 25-04-2016 RJP_RS03260 bb2a9636e64d4dabf477998d9b97f670 310 PANTHER PTHR22912:SF48 1 309 3.0E-159 T 25-04-2016 RJP_RS03260 bb2a9636e64d4dabf477998d9b97f670 310 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 6 297 1.8E-49 T 25-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RJP_RS03260 bb2a9636e64d4dabf477998d9b97f670 310 Gene3D G3DSA:3.50.50.60 119 231 3.7E-33 T 25-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RJP_RS03260 bb2a9636e64d4dabf477998d9b97f670 310 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 236 257 9.2E-75 T 25-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 RJP_RS03260 bb2a9636e64d4dabf477998d9b97f670 310 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 271 289 9.2E-75 T 25-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 RJP_RS03260 bb2a9636e64d4dabf477998d9b97f670 310 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 143 167 9.2E-75 T 25-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 RJP_RS03260 bb2a9636e64d4dabf477998d9b97f670 310 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 39 54 9.2E-75 T 25-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 RJP_RS03260 bb2a9636e64d4dabf477998d9b97f670 310 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 195 211 9.2E-75 T 25-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 RJP_RS03260 bb2a9636e64d4dabf477998d9b97f670 310 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 60 70 9.2E-75 T 25-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 RJP_RS03260 bb2a9636e64d4dabf477998d9b97f670 310 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 128 140 9.2E-75 T 25-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 RJP_RS03260 bb2a9636e64d4dabf477998d9b97f670 310 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 6 28 9.2E-75 T 25-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 RJP_RS03260 bb2a9636e64d4dabf477998d9b97f670 310 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 106 114 9.2E-75 T 25-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 RJP_RS06105 76470fbcb95163be15d173c13df64f61 362 PANTHER PTHR33529:SF1 1 361 8.0E-30 T 25-04-2016 RJP_RS06105 76470fbcb95163be15d173c13df64f61 362 PANTHER PTHR33529 1 361 8.0E-30 T 25-04-2016 RJP_RS06105 76470fbcb95163be15d173c13df64f61 362 Pfam PF03739 Predicted permease YjgP/YjgQ family 9 357 1.5E-46 T 25-04-2016 IPR005495 Permease LptG/LptF-related GO:0016021 RJP_RS04960 98629958bf084fd915b557428b6b43ee 123 SMART SM00450 7 114 3.0E-12 T 25-04-2016 IPR001763 Rhodanese-like domain RJP_RS04960 98629958bf084fd915b557428b6b43ee 123 Pfam PF00581 Rhodanese-like domain 11 107 7.3E-6 T 25-04-2016 IPR001763 Rhodanese-like domain RJP_RS04960 98629958bf084fd915b557428b6b43ee 123 Gene3D G3DSA:3.40.250.10 3 122 5.8E-39 T 25-04-2016 IPR001763 Rhodanese-like domain RJP_RS04960 98629958bf084fd915b557428b6b43ee 123 SUPERFAMILY SSF52821 5 121 1.57E-17 T 25-04-2016 IPR001763 Rhodanese-like domain RJP_RS03085 452e73b1f4fc5accf9d8d19984438f10 379 SUPERFAMILY SSF55979 3 117 1.57E-20 T 25-04-2016 RJP_RS03085 452e73b1f4fc5accf9d8d19984438f10 379 Pfam PF00712 DNA polymerase III beta subunit, N-terminal domain 2 120 2.1E-22 T 25-04-2016 IPR022634 DNA polymerase III, beta chain, N-terminal GO:0003677|GO:0003887|GO:0006260|GO:0008408|GO:0009360 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 RJP_RS03085 452e73b1f4fc5accf9d8d19984438f10 379 SUPERFAMILY SSF55979 126 248 6.99E-23 T 25-04-2016 RJP_RS03085 452e73b1f4fc5accf9d8d19984438f10 379 PANTHER PTHR30478 3 379 1.1E-88 T 25-04-2016 RJP_RS03085 452e73b1f4fc5accf9d8d19984438f10 379 PIRSF PIRSF000804 2 379 8.7E-91 T 25-04-2016 IPR001001 DNA polymerase III, beta chain GO:0003677|GO:0003887|GO:0006260|GO:0008408|GO:0009360 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 RJP_RS03085 452e73b1f4fc5accf9d8d19984438f10 379 Pfam PF02768 DNA polymerase III beta subunit, C-terminal domain 251 377 1.1E-23 T 25-04-2016 IPR022635 DNA polymerase III, beta chain, C-terminal GO:0003677|GO:0003887|GO:0006260|GO:0008408|GO:0009360 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 RJP_RS03085 452e73b1f4fc5accf9d8d19984438f10 379 Gene3D G3DSA:3.10.150.10 252 379 6.0E-37 T 25-04-2016 RJP_RS03085 452e73b1f4fc5accf9d8d19984438f10 379 TIGRFAM TIGR00663 dnan: DNA polymerase III, beta subunit 2 378 4.4E-79 T 25-04-2016 IPR001001 DNA polymerase III, beta chain GO:0003677|GO:0003887|GO:0006260|GO:0008408|GO:0009360 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 RJP_RS03085 452e73b1f4fc5accf9d8d19984438f10 379 SUPERFAMILY SSF55979 251 379 3.73E-26 T 25-04-2016 RJP_RS03085 452e73b1f4fc5accf9d8d19984438f10 379 Gene3D G3DSA:3.10.150.10 119 249 2.1E-30 T 25-04-2016 RJP_RS03085 452e73b1f4fc5accf9d8d19984438f10 379 Gene3D G3DSA:3.10.150.10 3 118 5.1E-18 T 25-04-2016 RJP_RS03085 452e73b1f4fc5accf9d8d19984438f10 379 Pfam PF02767 DNA polymerase III beta subunit, central domain 130 247 1.5E-25 T 25-04-2016 IPR022637 DNA polymerase III, beta chain, central GO:0003887|GO:0006260|GO:0008408|GO:0009360 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 RJP_RS03085 452e73b1f4fc5accf9d8d19984438f10 379 SMART SM00480 18 375 6.4E-139 T 25-04-2016 IPR001001 DNA polymerase III, beta chain GO:0003677|GO:0003887|GO:0006260|GO:0008408|GO:0009360 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 RJP_RS02825 41451229e22cad55989021af1b5dc0b2 426 Pfam PF03129 Anticodon binding domain 336 425 8.5E-17 T 25-04-2016 IPR004154 Anticodon-binding RJP_RS02825 41451229e22cad55989021af1b5dc0b2 426 PRINTS PR01046 Prolyl-tRNA synthetase signature 144 155 2.2E-13 T 25-04-2016 IPR002316 Proline-tRNA ligase, class IIa GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 RJP_RS02825 41451229e22cad55989021af1b5dc0b2 426 PRINTS PR01046 Prolyl-tRNA synthetase signature 68 86 2.2E-13 T 25-04-2016 IPR002316 Proline-tRNA ligase, class IIa GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 RJP_RS02825 41451229e22cad55989021af1b5dc0b2 426 PRINTS PR01046 Prolyl-tRNA synthetase signature 104 115 2.2E-13 T 25-04-2016 IPR002316 Proline-tRNA ligase, class IIa GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 RJP_RS02825 41451229e22cad55989021af1b5dc0b2 426 PRINTS PR01046 Prolyl-tRNA synthetase signature 134 142 2.2E-13 T 25-04-2016 IPR002316 Proline-tRNA ligase, class IIa GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 RJP_RS02825 41451229e22cad55989021af1b5dc0b2 426 SUPERFAMILY SSF55681 10 231 4.18E-90 T 25-04-2016 RJP_RS02825 41451229e22cad55989021af1b5dc0b2 426 SUPERFAMILY SSF55681 268 338 4.18E-90 T 25-04-2016 RJP_RS02825 41451229e22cad55989021af1b5dc0b2 426 Gene3D G3DSA:3.30.930.10 11 331 4.8E-93 T 25-04-2016 RJP_RS02825 41451229e22cad55989021af1b5dc0b2 426 Gene3D G3DSA:3.40.50.800 332 425 1.4E-22 T 25-04-2016 IPR004154 Anticodon-binding RJP_RS02825 41451229e22cad55989021af1b5dc0b2 426 Pfam PF00587 tRNA synthetase class II core domain (G, H, P, S and T) 95 320 2.7E-36 T 25-04-2016 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 RJP_RS02825 41451229e22cad55989021af1b5dc0b2 426 SUPERFAMILY SSF52954 324 426 8.67E-26 T 25-04-2016 IPR004154 Anticodon-binding RJP_RS02825 41451229e22cad55989021af1b5dc0b2 426 PANTHER PTHR11451:SF3 232 426 8.7E-134 T 25-04-2016 IPR004500 Prolyl-tRNA synthetase, class IIa, bacterial-type GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 RJP_RS02825 41451229e22cad55989021af1b5dc0b2 426 PANTHER PTHR11451:SF3 4 216 8.7E-134 T 25-04-2016 IPR004500 Prolyl-tRNA synthetase, class IIa, bacterial-type GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 RJP_RS02825 41451229e22cad55989021af1b5dc0b2 426 TIGRFAM TIGR00409 proS_fam_II: proline--tRNA ligase 1 225 5.5E-102 T 25-04-2016 IPR004500 Prolyl-tRNA synthetase, class IIa, bacterial-type GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 RJP_RS02825 41451229e22cad55989021af1b5dc0b2 426 Hamap MF_01570 Proline--tRNA ligase [proS]. 1 426 57.952 T 25-04-2016 IPR023716 Proline-tRNA ligase, class IIa, type 2 GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 RJP_RS02825 41451229e22cad55989021af1b5dc0b2 426 PANTHER PTHR11451 232 426 8.7E-134 T 25-04-2016 RJP_RS02825 41451229e22cad55989021af1b5dc0b2 426 PANTHER PTHR11451 4 216 8.7E-134 T 25-04-2016 RJP_RS04245 93286ce96dd97884eac264d95b1796f6 111 Gene3D G3DSA:3.40.50.80 2 101 4.8E-7 T 25-04-2016 RJP_RS04245 93286ce96dd97884eac264d95b1796f6 111 SUPERFAMILY SSF52343 2 92 4.25E-6 T 25-04-2016 RJP_RS02230 154cecf8e54facc176ced124acc9a3e8 92 Pfam PF00005 ABC transporter 18 82 3.4E-11 T 25-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 RJP_RS02230 154cecf8e54facc176ced124acc9a3e8 92 PANTHER PTHR19211:SF38 1 92 5.9E-31 T 25-04-2016 RJP_RS02230 154cecf8e54facc176ced124acc9a3e8 92 PANTHER PTHR19211 1 92 5.9E-31 T 25-04-2016 RJP_RS02230 154cecf8e54facc176ced124acc9a3e8 92 Gene3D G3DSA:3.40.50.300 4 90 3.0E-18 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RJP_RS02230 154cecf8e54facc176ced124acc9a3e8 92 SUPERFAMILY SSF52540 1 89 1.02E-17 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RJP_RS00845 743451ebac4cd6b47e3529803894b7ee 308 Gene3D G3DSA:1.20.1640.10 103 304 4.1E-34 T 25-04-2016 RJP_RS00845 743451ebac4cd6b47e3529803894b7ee 308 TIGRFAM TIGR00966 3a0501s07: protein-export membrane protein SecF 44 289 7.2E-91 T 25-04-2016 IPR005665 Protein-export membrane protein SecF, bacterial GO:0006886|GO:0015450 RJP_RS00845 743451ebac4cd6b47e3529803894b7ee 308 PANTHER PTHR30081 5 300 7.1E-76 T 25-04-2016 RJP_RS00845 743451ebac4cd6b47e3529803894b7ee 308 Pfam PF07549 SecD/SecF GG Motif 37 63 1.5E-8 T 25-04-2016 IPR022646 Protein-export membrane protein SecD/SecF/SecDF, conserved site RJP_RS00845 743451ebac4cd6b47e3529803894b7ee 308 Hamap MF_01464_B Protein-export membrane protein SecF [secF]. 15 300 27.497 T 25-04-2016 IPR005665 Protein-export membrane protein SecF, bacterial GO:0006886|GO:0015450 RJP_RS00845 743451ebac4cd6b47e3529803894b7ee 308 TIGRFAM TIGR00916 2A0604s01: protein-export membrane protein, SecD/SecF family 116 286 6.0E-62 T 25-04-2016 IPR022645 Protein-export membrane protein SecD/SecF, bacterial RJP_RS00845 743451ebac4cd6b47e3529803894b7ee 308 PRINTS PR01755 Bacterial translocase SecF protein signature 42 57 3.8E-31 T 25-04-2016 IPR022645 Protein-export membrane protein SecD/SecF, bacterial RJP_RS00845 743451ebac4cd6b47e3529803894b7ee 308 PRINTS PR01755 Bacterial translocase SecF protein signature 237 252 3.8E-31 T 25-04-2016 IPR022645 Protein-export membrane protein SecD/SecF, bacterial RJP_RS00845 743451ebac4cd6b47e3529803894b7ee 308 PRINTS PR01755 Bacterial translocase SecF protein signature 157 171 3.8E-31 T 25-04-2016 IPR022645 Protein-export membrane protein SecD/SecF, bacterial RJP_RS00845 743451ebac4cd6b47e3529803894b7ee 308 PRINTS PR01755 Bacterial translocase SecF protein signature 205 223 3.8E-31 T 25-04-2016 IPR022645 Protein-export membrane protein SecD/SecF, bacterial RJP_RS00845 743451ebac4cd6b47e3529803894b7ee 308 Pfam PF02355 Protein export membrane protein 112 298 8.0E-73 T 25-04-2016 IPR022813 Protein-export membrane protein SecD/SecF, archaeal and bacterial RJP_RS00845 743451ebac4cd6b47e3529803894b7ee 308 SUPERFAMILY SSF82866 99 302 9.55E-44 T 25-04-2016 RJP_RS06530 45d7d57ba5ffa69d2b043621773a2679 254 Gene3D G3DSA:2.40.160.20 43 253 2.8E-24 T 25-04-2016 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 RJP_RS06530 45d7d57ba5ffa69d2b043621773a2679 254 SUPERFAMILY SSF56925 44 252 1.7E-20 T 25-04-2016 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 RJP_RS06530 45d7d57ba5ffa69d2b043621773a2679 254 Pfam PF13505 Outer membrane protein beta-barrel domain 40 252 7.8E-11 T 25-04-2016 IPR027385 Outer membrane protein beta-barrel RJP_RS00620 d87b14ab6726fbeb29a782c3eb2e2908 418 Gene3D G3DSA:1.20.1250.20 6 209 1.2E-20 T 25-04-2016 RJP_RS00620 d87b14ab6726fbeb29a782c3eb2e2908 418 Gene3D G3DSA:1.20.1250.20 232 412 4.6E-20 T 25-04-2016 RJP_RS00620 d87b14ab6726fbeb29a782c3eb2e2908 418 PANTHER PTHR23508 2 412 6.7E-131 T 25-04-2016 RJP_RS00620 d87b14ab6726fbeb29a782c3eb2e2908 418 Pfam PF00083 Sugar (and other) transporter 13 208 6.7E-20 T 25-04-2016 IPR005828 Major facilitator, sugar transporter-like GO:0016021|GO:0022857|GO:0055085 RJP_RS00620 d87b14ab6726fbeb29a782c3eb2e2908 418 SUPERFAMILY SSF103473 5 413 6.02E-63 T 25-04-2016 IPR020846 Major facilitator superfamily domain RJP_RS00620 d87b14ab6726fbeb29a782c3eb2e2908 418 Pfam PF07690 Major Facilitator Superfamily 262 411 3.2E-13 T 25-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 RJP_RS00620 d87b14ab6726fbeb29a782c3eb2e2908 418 PANTHER PTHR23508:SF1 2 412 6.7E-131 T 25-04-2016 RJP_RS01240 cf6b12d4a614c5c0c8de80a625bbbc42 138 PANTHER PTHR12589 5 137 4.8E-26 T 25-04-2016 IPR007115 6-pyruvoyl tetrahydropterin synthase/QueD family protein RJP_RS01240 cf6b12d4a614c5c0c8de80a625bbbc42 138 Gene3D G3DSA:3.30.479.10 1 138 2.3E-34 T 25-04-2016 RJP_RS01240 cf6b12d4a614c5c0c8de80a625bbbc42 138 SUPERFAMILY SSF55620 1 137 1.06E-36 T 25-04-2016 RJP_RS01240 cf6b12d4a614c5c0c8de80a625bbbc42 138 Pfam PF01242 6-pyruvoyl tetrahydropterin synthase 4 137 1.6E-33 T 25-04-2016 IPR007115 6-pyruvoyl tetrahydropterin synthase/QueD family protein RJP_RS05725 737baa4cb9b15e4572c7fdb74a45f054 155 SUPERFAMILY SSF53098 6 145 2.91E-53 T 25-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 RJP_RS05725 737baa4cb9b15e4572c7fdb74a45f054 155 Pfam PF00075 RNase H 6 144 7.1E-49 T 25-04-2016 IPR002156 Ribonuclease H domain GO:0003676|GO:0004523 RJP_RS05725 737baa4cb9b15e4572c7fdb74a45f054 155 PANTHER PTHR10642 1 145 5.7E-54 T 25-04-2016 RJP_RS05725 737baa4cb9b15e4572c7fdb74a45f054 155 Hamap MF_00042 Ribonuclease H [rnhA]. 5 153 29.458 T 25-04-2016 IPR022892 Ribonuclease H GO:0004523 RJP_RS05725 737baa4cb9b15e4572c7fdb74a45f054 155 Gene3D G3DSA:3.30.420.10 5 145 6.9E-56 T 25-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 RJP_RS05740 2989ff457e7ef00667b87cea0263bfdd 191 PANTHER PTHR10695:SF26 1 188 7.6E-19 T 25-04-2016 RJP_RS05740 2989ff457e7ef00667b87cea0263bfdd 191 Gene3D G3DSA:3.40.50.300 1 187 4.9E-35 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RJP_RS05740 2989ff457e7ef00667b87cea0263bfdd 191 Pfam PF01121 Dephospho-CoA kinase 3 169 1.8E-20 T 25-04-2016 IPR001977 Dephospho-CoA kinase GO:0004140|GO:0005524|GO:0015937 KEGG: 00770+2.7.1.24|UniPathway: UPA00241 RJP_RS05740 2989ff457e7ef00667b87cea0263bfdd 191 TIGRFAM TIGR00152 TIGR00152: dephospho-CoA kinase 4 181 5.1E-25 T 25-04-2016 IPR001977 Dephospho-CoA kinase GO:0004140|GO:0005524|GO:0015937 KEGG: 00770+2.7.1.24|UniPathway: UPA00241 RJP_RS05740 2989ff457e7ef00667b87cea0263bfdd 191 SUPERFAMILY SSF52540 1 185 7.07E-21 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RJP_RS05740 2989ff457e7ef00667b87cea0263bfdd 191 Hamap MF_00376 Dephospho-CoA kinase [coaE]. 1 190 17.279 T 25-04-2016 IPR001977 Dephospho-CoA kinase GO:0004140|GO:0005524|GO:0015937 KEGG: 00770+2.7.1.24|UniPathway: UPA00241 RJP_RS05740 2989ff457e7ef00667b87cea0263bfdd 191 PANTHER PTHR10695 1 188 7.6E-19 T 25-04-2016 RJP_RS02500 78bbc2c72a848aed4154a5a96d0c4db3 390 PANTHER PTHR12526 9 386 2.2E-58 T 25-04-2016 RJP_RS02500 78bbc2c72a848aed4154a5a96d0c4db3 390 Gene3D G3DSA:3.40.50.2000 160 361 7.1E-24 T 25-04-2016 RJP_RS02500 78bbc2c72a848aed4154a5a96d0c4db3 390 SUPERFAMILY SSF53756 14 387 4.31E-78 T 25-04-2016 RJP_RS02500 78bbc2c72a848aed4154a5a96d0c4db3 390 Pfam PF13439 Glycosyltransferase Family 4 25 179 3.6E-28 T 25-04-2016 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain RJP_RS02500 78bbc2c72a848aed4154a5a96d0c4db3 390 Pfam PF00534 Glycosyl transferases group 1 198 345 5.9E-31 T 25-04-2016 IPR001296 Glycosyl transferase, family 1 RJP_RS06845 cbd7eef88f5b10e80d79333b23ea7825 215 PANTHER PTHR14969 73 205 6.7E-20 T 25-04-2016 RJP_RS06845 cbd7eef88f5b10e80d79333b23ea7825 215 PANTHER PTHR14969 11 53 6.7E-20 T 25-04-2016 RJP_RS06845 cbd7eef88f5b10e80d79333b23ea7825 215 SMART SM00014 77 193 5.4E-12 T 25-04-2016 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase RJP_RS06845 cbd7eef88f5b10e80d79333b23ea7825 215 Gene3D G3DSA:1.20.144.10 72 190 5.8E-17 T 25-04-2016 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase RJP_RS06845 cbd7eef88f5b10e80d79333b23ea7825 215 SUPERFAMILY SSF48317 9 197 5.89E-24 T 25-04-2016 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase RJP_RS06845 cbd7eef88f5b10e80d79333b23ea7825 215 Pfam PF01569 PAP2 superfamily 83 195 2.6E-18 T 25-04-2016 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase RJP_RS02240 d37a714f9d73110b06bfdd6d175d0246 135 PANTHER PTHR19211:SF38 1 131 2.4E-48 T 25-04-2016 RJP_RS02240 d37a714f9d73110b06bfdd6d175d0246 135 Pfam PF00005 ABC transporter 15 101 3.6E-12 T 25-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 RJP_RS02240 d37a714f9d73110b06bfdd6d175d0246 135 SUPERFAMILY SSF52540 18 130 2.67E-24 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RJP_RS02240 d37a714f9d73110b06bfdd6d175d0246 135 PANTHER PTHR19211 1 131 2.4E-48 T 25-04-2016 RJP_RS02240 d37a714f9d73110b06bfdd6d175d0246 135 Gene3D G3DSA:3.40.50.300 18 132 6.4E-24 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RJP_RS06370 7d2f7025baa5bde546513d288a89363a 159 SMART SM00287 27 90 1.6E-13 T 25-04-2016 IPR003646 SH3-like domain, bacterial-type RJP_RS06370 7d2f7025baa5bde546513d288a89363a 159 Pfam PF06347 Bacterial SH3 domain 33 89 3.6E-20 T 25-04-2016 IPR010466 Protein of unknown function DUF1058 RJP_RS06370 7d2f7025baa5bde546513d288a89363a 159 Pfam PF06347 Bacterial SH3 domain 100 151 3.0E-7 T 25-04-2016 IPR010466 Protein of unknown function DUF1058 RJP_RS00015 7bc3ef03984716a13be917b91cbf1503 273 Pfam PF03618 Kinase/pyrophosphorylase 6 261 3.2E-79 T 25-04-2016 IPR005177 Bifunctional kinase-pyrophosphorylase GO:0005524|GO:0016772 RJP_RS00015 7bc3ef03984716a13be917b91cbf1503 273 PANTHER PTHR31756:SF3 5 272 7.1E-76 T 25-04-2016 RJP_RS00015 7bc3ef03984716a13be917b91cbf1503 273 PANTHER PTHR31756 5 272 7.1E-76 T 25-04-2016 RJP_RS00015 7bc3ef03984716a13be917b91cbf1503 273 Hamap MF_00921 Putative pyruvate, phosphate dikinase regulatory protein. 4 267 51.943 T 25-04-2016 IPR026565 Putative pyruvate, phosphate dikinase regulatory protein RJP_RS00655 ca1ee1b3582475acbb4e5a0ce867352b 309 Gene3D G3DSA:1.10.286.20 206 247 3.8E-19 T 25-04-2016 RJP_RS00655 ca1ee1b3582475acbb4e5a0ce867352b 309 Pfam PF00889 Elongation factor TS 73 290 6.6E-66 T 25-04-2016 IPR014039 Translation elongation factor EFTs/EF1B, dimerisation GO:0003746|GO:0005622|GO:0006414 RJP_RS00655 ca1ee1b3582475acbb4e5a0ce867352b 309 TIGRFAM TIGR00116 tsf: translation elongation factor Ts 5 307 5.6E-92 T 25-04-2016 IPR001816 Translation elongation factor EFTs/EF1B GO:0003746|GO:0005622|GO:0006414 RJP_RS00655 ca1ee1b3582475acbb4e5a0ce867352b 309 Hamap MF_00050 Elongation factor Ts [tsf]. 1 307 72.339 T 25-04-2016 IPR001816 Translation elongation factor EFTs/EF1B GO:0003746|GO:0005622|GO:0006414 RJP_RS00655 ca1ee1b3582475acbb4e5a0ce867352b 309 Gene3D G3DSA:3.30.479.20 59 150 6.8E-18 T 25-04-2016 IPR014039 Translation elongation factor EFTs/EF1B, dimerisation GO:0003746|GO:0005622|GO:0006414 RJP_RS00655 ca1ee1b3582475acbb4e5a0ce867352b 309 SUPERFAMILY SSF54713 150 307 5.63E-44 T 25-04-2016 IPR014039 Translation elongation factor EFTs/EF1B, dimerisation GO:0003746|GO:0005622|GO:0006414 RJP_RS00655 ca1ee1b3582475acbb4e5a0ce867352b 309 SUPERFAMILY SSF46934 5 58 4.38E-19 T 25-04-2016 IPR009060 UBA-like GO:0005515 RJP_RS00655 ca1ee1b3582475acbb4e5a0ce867352b 309 Gene3D G3DSA:1.10.8.10 5 57 1.5E-27 T 25-04-2016 RJP_RS00655 ca1ee1b3582475acbb4e5a0ce867352b 309 Gene3D G3DSA:3.30.479.20 152 199 9.9E-20 T 25-04-2016 IPR014039 Translation elongation factor EFTs/EF1B, dimerisation GO:0003746|GO:0005622|GO:0006414 RJP_RS00655 ca1ee1b3582475acbb4e5a0ce867352b 309 Gene3D G3DSA:3.30.479.20 248 289 9.9E-20 T 25-04-2016 IPR014039 Translation elongation factor EFTs/EF1B, dimerisation GO:0003746|GO:0005622|GO:0006414 RJP_RS00655 ca1ee1b3582475acbb4e5a0ce867352b 309 ProSitePatterns PS01127 Elongation factor Ts signature 2. 77 87 - T 25-04-2016 IPR018101 Translation elongation factor Ts, conserved site GO:0003746|GO:0005622|GO:0006414 RJP_RS00655 ca1ee1b3582475acbb4e5a0ce867352b 309 ProSitePatterns PS01126 Elongation factor Ts signature 1. 14 29 - T 25-04-2016 IPR018101 Translation elongation factor Ts, conserved site GO:0003746|GO:0005622|GO:0006414 RJP_RS00655 ca1ee1b3582475acbb4e5a0ce867352b 309 PANTHER PTHR11741 1 309 5.3E-128 T 25-04-2016 IPR001816 Translation elongation factor EFTs/EF1B GO:0003746|GO:0005622|GO:0006414 RJP_RS00655 ca1ee1b3582475acbb4e5a0ce867352b 309 SUPERFAMILY SSF54713 58 146 4.71E-21 T 25-04-2016 IPR014039 Translation elongation factor EFTs/EF1B, dimerisation GO:0003746|GO:0005622|GO:0006414 RJP_RS05295 056b45861895ba84ab3df0b8b28519fa 190 PIRSF PIRSF036773 1 190 1.2E-69 T 25-04-2016 RJP_RS05295 056b45861895ba84ab3df0b8b28519fa 190 Gene3D G3DSA:3.30.1370.70 1 90 3.3E-31 T 25-04-2016 IPR014824 Scaffold protein Nfu/NifU, N-terminal RJP_RS05295 056b45861895ba84ab3df0b8b28519fa 190 Pfam PF08712 Scaffold protein Nfu/NifU N terminal 3 90 2.5E-28 T 25-04-2016 IPR014824 Scaffold protein Nfu/NifU, N-terminal RJP_RS05295 056b45861895ba84ab3df0b8b28519fa 190 Pfam PF01106 NifU-like domain 117 183 1.3E-26 T 25-04-2016 IPR001075 NIF system FeS cluster assembly, NifU, C-terminal GO:0005506|GO:0016226|GO:0051536 RJP_RS05295 056b45861895ba84ab3df0b8b28519fa 190 SUPERFAMILY SSF110836 1 92 3.14E-27 T 25-04-2016 IPR014824 Scaffold protein Nfu/NifU, N-terminal RJP_RS05295 056b45861895ba84ab3df0b8b28519fa 190 PANTHER PTHR11178:SF1 1 190 2.6E-87 T 25-04-2016 IPR017065 NFU1 iron-sulfur cluster scaffold homologue GO:0016226 RJP_RS05295 056b45861895ba84ab3df0b8b28519fa 190 SUPERFAMILY SSF117916 109 188 6.1E-26 T 25-04-2016 RJP_RS05295 056b45861895ba84ab3df0b8b28519fa 190 SMART SM00932 3 90 5.8E-41 T 25-04-2016 IPR014824 Scaffold protein Nfu/NifU, N-terminal RJP_RS05295 056b45861895ba84ab3df0b8b28519fa 190 PANTHER PTHR11178 1 190 2.6E-87 T 25-04-2016 RJP_RS05295 056b45861895ba84ab3df0b8b28519fa 190 ProDom PD002830 NIFU NIFU NITROGEN-FIXING C-TERMINAL FIXATION NITROGEN NIFU-LIKE DOMAIN CLUSTER HESB/YADR/YFHF:NITROGEN-FIXING 125 175 5.0E-24 T 25-04-2016 IPR001075 NIF system FeS cluster assembly, NifU, C-terminal GO:0005506|GO:0016226|GO:0051536 RJP_RS02985 5a1c57132e1f5a7cdff5e861f16cce2e 377 TIGRFAM TIGR02614 ftsW: cell division protein FtsW 18 363 2.3E-108 T 25-04-2016 IPR013437 Cell division protein FtsW GO:0009252|GO:0016021|GO:0051301 RJP_RS02985 5a1c57132e1f5a7cdff5e861f16cce2e 377 PANTHER PTHR30474:SF2 1 358 3.6E-97 T 25-04-2016 RJP_RS02985 5a1c57132e1f5a7cdff5e861f16cce2e 377 Pfam PF01098 Cell cycle protein 21 364 1.5E-74 T 25-04-2016 IPR001182 Cell cycle protein FtsW/RodA GO:0016021|GO:0051301 RJP_RS02985 5a1c57132e1f5a7cdff5e861f16cce2e 377 PANTHER PTHR30474 1 358 3.6E-97 T 25-04-2016 IPR001182 Cell cycle protein FtsW/RodA GO:0016021|GO:0051301 RJP_RS00240 9c11b9dfa885071fee4ff65ed04c31de 222 ProDom PD210227 COIL COILED RC0039 RP030 1 222 6.0E-111 T 25-04-2016 IPR020171 Uncharacterised protein family RC0039 RJP_RS02090 ae63416533728f213d7079be8cab66fe 250 TIGRFAM TIGR02781 VirB9: P-type conjugative transfer protein VirB9 4 247 3.2E-80 T 25-04-2016 IPR014148 P-type conjugative transfer protein VirB9 RJP_RS02090 ae63416533728f213d7079be8cab66fe 250 Pfam PF03524 Conjugal transfer protein 31 245 7.1E-61 T 25-04-2016 IPR010258 Conjugal transfer, TrbG/VirB9/CagX RJP_RS05235 9335a035686f7d18e551a6e459017cb7 105 SMART SM01403 6 100 7.6E-46 T 25-04-2016 IPR027486 Ribosomal protein S10 domain RJP_RS05235 9335a035686f7d18e551a6e459017cb7 105 PRINTS PR00971 Ribosomal protein S10 family signature 60 74 1.3E-16 T 25-04-2016 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 RJP_RS05235 9335a035686f7d18e551a6e459017cb7 105 PRINTS PR00971 Ribosomal protein S10 family signature 39 54 1.3E-16 T 25-04-2016 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 RJP_RS05235 9335a035686f7d18e551a6e459017cb7 105 PRINTS PR00971 Ribosomal protein S10 family signature 4 17 1.3E-16 T 25-04-2016 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 RJP_RS05235 9335a035686f7d18e551a6e459017cb7 105 SUPERFAMILY SSF54999 4 100 2.35E-33 T 25-04-2016 IPR027486 Ribosomal protein S10 domain RJP_RS05235 9335a035686f7d18e551a6e459017cb7 105 Pfam PF00338 Ribosomal protein S10p/S20e 6 99 5.4E-32 T 25-04-2016 IPR027486 Ribosomal protein S10 domain RJP_RS05235 9335a035686f7d18e551a6e459017cb7 105 TIGRFAM TIGR01049 rpsJ_bact: ribosomal protein uS10 3 100 8.2E-43 T 25-04-2016 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 RJP_RS05235 9335a035686f7d18e551a6e459017cb7 105 Gene3D G3DSA:3.30.70.600 3 102 4.1E-39 T 25-04-2016 IPR027486 Ribosomal protein S10 domain RJP_RS05235 9335a035686f7d18e551a6e459017cb7 105 Hamap MF_00508 30S ribosomal protein S10 [rpsJ]. 2 101 24.237 T 25-04-2016 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 RJP_RS05235 9335a035686f7d18e551a6e459017cb7 105 PANTHER PTHR11700 1 102 2.5E-40 T 25-04-2016 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 RJP_RS06935 bdc216524d31ab1b109870b855c3fcec 65 SUPERFAMILY SSF51735 2 64 5.57E-13 T 25-04-2016 IPR016040 NAD(P)-binding domain RJP_RS06935 bdc216524d31ab1b109870b855c3fcec 65 Pfam PF00106 short chain dehydrogenase 2 64 9.9E-13 T 25-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RJP_RS06935 bdc216524d31ab1b109870b855c3fcec 65 PANTHER PTHR24322 3 65 8.6E-14 T 25-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RJP_RS06935 bdc216524d31ab1b109870b855c3fcec 65 PANTHER PTHR24322:SF513 3 65 8.6E-14 T 25-04-2016 RJP_RS06935 bdc216524d31ab1b109870b855c3fcec 65 Gene3D G3DSA:3.40.50.720 2 65 5.0E-15 T 25-04-2016 IPR016040 NAD(P)-binding domain RJP_RS02865 c247bae5f205cb53ce2491d5fb33a25a 306 SUPERFAMILY SSF56601 1 272 1.18E-69 T 25-04-2016 IPR012338 Beta-lactamase/transpeptidase-like RJP_RS02865 c247bae5f205cb53ce2491d5fb33a25a 306 Gene3D G3DSA:3.40.710.10 11 272 3.1E-83 T 25-04-2016 IPR012338 Beta-lactamase/transpeptidase-like RJP_RS02865 c247bae5f205cb53ce2491d5fb33a25a 306 PANTHER PTHR21581:SF3 1 272 9.3E-65 T 25-04-2016 RJP_RS02865 c247bae5f205cb53ce2491d5fb33a25a 306 Pfam PF00768 D-alanyl-D-alanine carboxypeptidase 36 254 3.5E-58 T 25-04-2016 IPR001967 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A, N-terminal GO:0006508|GO:0009002 RJP_RS02865 c247bae5f205cb53ce2491d5fb33a25a 306 PANTHER PTHR21581 1 272 9.3E-65 T 25-04-2016 RJP_RS02865 c247bae5f205cb53ce2491d5fb33a25a 306 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 141 154 5.5E-14 T 25-04-2016 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 RJP_RS02865 c247bae5f205cb53ce2491d5fb33a25a 306 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 61 72 5.5E-14 T 25-04-2016 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 RJP_RS02865 c247bae5f205cb53ce2491d5fb33a25a 306 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 114 131 5.5E-14 T 25-04-2016 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 RJP_RS06300 56251aa3551c616fb7bdcf6b0e73ef3c 473 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 133 354 7.7E-60 T 25-04-2016 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 RJP_RS06300 56251aa3551c616fb7bdcf6b0e73ef3c 473 Gene3D G3DSA:2.40.10.170 2 78 1.9E-33 T 25-04-2016 RJP_RS06300 56251aa3551c616fb7bdcf6b0e73ef3c 473 ProSitePatterns PS00152 ATP synthase alpha and beta subunits signature. 345 354 - T 25-04-2016 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 RJP_RS06300 56251aa3551c616fb7bdcf6b0e73ef3c 473 Gene3D G3DSA:3.40.50.300 79 355 1.1E-105 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RJP_RS06300 56251aa3551c616fb7bdcf6b0e73ef3c 473 SUPERFAMILY SSF50615 3 78 3.66E-25 T 25-04-2016 IPR004100 ATPase, F1 complex alpha/beta subunit, N-terminal domain GO:0015992|GO:0046034 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 RJP_RS06300 56251aa3551c616fb7bdcf6b0e73ef3c 473 PANTHER PTHR15184 4 472 0.0 T 25-04-2016 RJP_RS06300 56251aa3551c616fb7bdcf6b0e73ef3c 473 Hamap MF_01347 ATP synthase subunit beta [atpB]. 3 472 56.713 T 25-04-2016 IPR005722 ATPase, F1 complex, beta subunit GO:0015986|GO:0046933 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 RJP_RS06300 56251aa3551c616fb7bdcf6b0e73ef3c 473 PANTHER PTHR15184:SF44 4 472 0.0 T 25-04-2016 RJP_RS06300 56251aa3551c616fb7bdcf6b0e73ef3c 473 SUPERFAMILY SSF47917 357 472 1.39E-53 T 25-04-2016 IPR000793 ATPase, F1/V1/A1 complex, alpha/beta subunit, C-terminal GO:0015991|GO:0016820|GO:0033178 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 RJP_RS06300 56251aa3551c616fb7bdcf6b0e73ef3c 473 Pfam PF02874 ATP synthase alpha/beta family, beta-barrel domain 8 76 1.2E-21 T 25-04-2016 IPR004100 ATPase, F1 complex alpha/beta subunit, N-terminal domain GO:0015992|GO:0046034 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 RJP_RS06300 56251aa3551c616fb7bdcf6b0e73ef3c 473 PIRSF PIRSF039072 1 473 2.9E-275 T 25-04-2016 RJP_RS06300 56251aa3551c616fb7bdcf6b0e73ef3c 473 SUPERFAMILY SSF52540 80 360 3.2E-87 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RJP_RS06300 56251aa3551c616fb7bdcf6b0e73ef3c 473 TIGRFAM TIGR01039 atpD: ATP synthase F1, beta subunit 5 472 8.8E-257 T 25-04-2016 IPR005722 ATPase, F1 complex, beta subunit GO:0015986|GO:0046933 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 RJP_RS06300 56251aa3551c616fb7bdcf6b0e73ef3c 473 Gene3D G3DSA:1.10.1140.10 357 472 2.1E-55 T 25-04-2016 IPR024034 ATPase, F1 complex beta subunit/V1 complex, C-terminal KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 RJP_RS06300 56251aa3551c616fb7bdcf6b0e73ef3c 473 SMART SM00382 145 417 2.2E-4 T 25-04-2016 IPR003593 AAA+ ATPase domain RJP_RS00630 3ecdddf8842f4966e2dfd13e47adcd9d 100 Pfam PF03840 Preprotein translocase SecG subunit 4 71 2.8E-16 T 25-04-2016 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 RJP_RS00630 3ecdddf8842f4966e2dfd13e47adcd9d 100 PRINTS PR01651 Protein-export SecG membrane protein signature 3 23 1.1E-13 T 25-04-2016 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 RJP_RS00630 3ecdddf8842f4966e2dfd13e47adcd9d 100 PRINTS PR01651 Protein-export SecG membrane protein signature 53 75 1.1E-13 T 25-04-2016 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 RJP_RS00630 3ecdddf8842f4966e2dfd13e47adcd9d 100 PRINTS PR01651 Protein-export SecG membrane protein signature 37 53 1.1E-13 T 25-04-2016 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 RJP_RS00630 3ecdddf8842f4966e2dfd13e47adcd9d 100 TIGRFAM TIGR00810 secG: preprotein translocase, SecG subunit 4 73 6.0E-19 T 25-04-2016 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 RJP_RS02480 55813370b5e75cd71c25574ddf8b355d 604 SUPERFAMILY SSF53448 15 232 7.96E-52 T 25-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases RJP_RS02480 55813370b5e75cd71c25574ddf8b355d 604 SUPERFAMILY SSF53448 294 498 6.94E-49 T 25-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases RJP_RS02480 55813370b5e75cd71c25574ddf8b355d 604 Gene3D G3DSA:3.90.550.10 15 239 2.3E-50 T 25-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases RJP_RS02480 55813370b5e75cd71c25574ddf8b355d 604 Gene3D G3DSA:3.90.550.10 294 494 1.9E-46 T 25-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases RJP_RS02480 55813370b5e75cd71c25574ddf8b355d 604 Pfam PF00535 Glycosyl transferase family 2 17 126 1.1E-26 T 25-04-2016 IPR001173 Glycosyltransferase 2-like RJP_RS02480 55813370b5e75cd71c25574ddf8b355d 604 Pfam PF00535 Glycosyl transferase family 2 296 413 3.3E-30 T 25-04-2016 IPR001173 Glycosyltransferase 2-like RJP_RS02480 55813370b5e75cd71c25574ddf8b355d 604 PANTHER PTHR22916 15 230 7.5E-46 T 25-04-2016 RJP_RS00730 0a55bedc93ecacf287b5509d1092ff03 251 Pfam PF00005 ABC transporter 23 169 5.5E-31 T 25-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 RJP_RS00730 0a55bedc93ecacf287b5509d1092ff03 251 Gene3D G3DSA:3.40.50.300 8 241 4.2E-66 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RJP_RS00730 0a55bedc93ecacf287b5509d1092ff03 251 ProSitePatterns PS00211 ABC transporters family signature. 142 156 - T 25-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 RJP_RS00730 0a55bedc93ecacf287b5509d1092ff03 251 PANTHER PTHR24220 9 250 9.1E-104 T 25-04-2016 RJP_RS00730 0a55bedc93ecacf287b5509d1092ff03 251 SMART SM00382 32 219 1.3E-11 T 25-04-2016 IPR003593 AAA+ ATPase domain RJP_RS00730 0a55bedc93ecacf287b5509d1092ff03 251 PANTHER PTHR24220:SF567 9 250 9.1E-104 T 25-04-2016 RJP_RS00730 0a55bedc93ecacf287b5509d1092ff03 251 SUPERFAMILY SSF52540 8 241 6.98E-59 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RJP_RS00750 59560b82336a60e3ba72a4b712321d00 97 PANTHER PTHR13528 1 90 1.6E-21 T 25-04-2016 IPR026569 Ribosomal protein L28/L24 GO:0003735 RJP_RS00750 59560b82336a60e3ba72a4b712321d00 97 TIGRFAM TIGR00009 L28: ribosomal protein bL28 1 56 4.2E-22 T 25-04-2016 IPR001383 Ribosomal protein L28 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RJP_RS00750 59560b82336a60e3ba72a4b712321d00 97 Hamap MF_00373 50S ribosomal protein L28 [rpmB]. 1 68 19.901 T 25-04-2016 IPR001383 Ribosomal protein L28 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RJP_RS00750 59560b82336a60e3ba72a4b712321d00 97 Gene3D G3DSA:2.30.170.40 2 76 2.9E-24 T 25-04-2016 RJP_RS00750 59560b82336a60e3ba72a4b712321d00 97 Pfam PF00830 Ribosomal L28 family 3 61 4.6E-18 T 25-04-2016 IPR026569 Ribosomal protein L28/L24 GO:0003735 RJP_RS00750 59560b82336a60e3ba72a4b712321d00 97 SUPERFAMILY SSF143800 1 84 1.61E-22 T 25-04-2016 RJP_RS04330 d05d7f96fa13547573ce87629d349dd0 121 PANTHER PTHR23309:SF2 1 102 4.9E-13 T 25-04-2016 RJP_RS04330 d05d7f96fa13547573ce87629d349dd0 121 PANTHER PTHR23309 1 102 4.9E-13 T 25-04-2016 RJP_RS04330 d05d7f96fa13547573ce87629d349dd0 121 SUPERFAMILY SSF48179 39 112 8.25E-8 T 25-04-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 RJP_RS04330 d05d7f96fa13547573ce87629d349dd0 121 Gene3D G3DSA:3.40.50.720 1 41 6.2E-6 T 25-04-2016 IPR016040 NAD(P)-binding domain RJP_RS04330 d05d7f96fa13547573ce87629d349dd0 121 Pfam PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain 40 112 5.8E-9 T 25-04-2016 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7726|UniPathway: UPA00659 RJP_RS04330 d05d7f96fa13547573ce87629d349dd0 121 Gene3D G3DSA:1.10.1040.10 42 109 2.5E-6 T 25-04-2016 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 RJP_RS03865 6e55b59e32f5c8441ebb375ffb4778ee 264 PANTHER PTHR16255 18 252 2.0E-62 T 25-04-2016 RJP_RS03865 6e55b59e32f5c8441ebb375ffb4778ee 264 Pfam PF02582 Uncharacterised ACR, YagE family COG1723 37 209 6.2E-43 T 25-04-2016 IPR003734 Domain of unknown function DUF155 RJP_RS01545 936c217b01e859891146986416241a2b 89 ProDom PD197819 RP215 1 89 1.0E-46 T 25-04-2016 IPR022715 Protein of unknown function DUF2671 RJP_RS01545 936c217b01e859891146986416241a2b 89 Pfam PF10877 Protein of unknown function (DUF2671) 1 89 3.4E-60 T 25-04-2016 IPR022715 Protein of unknown function DUF2671 RJP_RS06230 1f9df4759d3d7b5219561a9b3cc3c395 554 Gene3D G3DSA:3.40.50.150 38 189 6.3E-29 T 25-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RJP_RS06230 1f9df4759d3d7b5219561a9b3cc3c395 554 PANTHER PTHR10108:SF829 401 410 3.7E-25 T 25-04-2016 RJP_RS06230 1f9df4759d3d7b5219561a9b3cc3c395 554 PANTHER PTHR10108:SF829 49 186 3.7E-25 T 25-04-2016 RJP_RS06230 1f9df4759d3d7b5219561a9b3cc3c395 554 PANTHER PTHR10108 401 410 3.7E-25 T 25-04-2016 RJP_RS06230 1f9df4759d3d7b5219561a9b3cc3c395 554 PANTHER PTHR10108 49 186 3.7E-25 T 25-04-2016 RJP_RS06230 1f9df4759d3d7b5219561a9b3cc3c395 554 SUPERFAMILY SSF53335 68 191 2.15E-29 T 25-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RJP_RS06230 1f9df4759d3d7b5219561a9b3cc3c395 554 Pfam PF10119 Predicted methyltransferase regulatory domain 246 327 5.5E-25 T 25-04-2016 IPR018773 Methyltransferase regulatory domain, predicted RJP_RS06230 1f9df4759d3d7b5219561a9b3cc3c395 554 Pfam PF13847 Methyltransferase domain 72 181 4.5E-17 T 25-04-2016 IPR025714 Methyltransferase domain RJP_RS00580 2223b465bd44386cf18e69915ba559c9 188 SUPERFAMILY SSF51283 2 186 5.89E-48 T 25-04-2016 IPR029054 dUTPase-like RJP_RS00580 2223b465bd44386cf18e69915ba559c9 188 PANTHER PTHR11241 1 187 4.4E-70 T 25-04-2016 RJP_RS00580 2223b465bd44386cf18e69915ba559c9 188 Hamap MF_00146 Deoxycytidine triphosphate deaminase [dcd]. 2 188 27.07 T 25-04-2016 IPR011962 Deoxycytidine triphosphate deaminase GO:0006229|GO:0008829 KEGG: 00240+3.5.4.13|MetaCyc: PWY-7187|UniPathway: UPA00610 RJP_RS00580 2223b465bd44386cf18e69915ba559c9 188 Pfam PF00692 dUTPase 82 167 2.9E-4 T 25-04-2016 IPR008180 Deoxyuridine triphosphate nucleotidohydrolase/Deoxycytidine triphosphate deaminase GO:0016787|GO:0046080 RJP_RS00580 2223b465bd44386cf18e69915ba559c9 188 PANTHER PTHR11241:SF1 1 187 4.4E-70 T 25-04-2016 RJP_RS00580 2223b465bd44386cf18e69915ba559c9 188 Gene3D G3DSA:2.70.40.10 3 186 1.0E-60 T 25-04-2016 IPR029054 dUTPase-like RJP_RS00580 2223b465bd44386cf18e69915ba559c9 188 TIGRFAM TIGR02274 dCTP_deam: deoxycytidine triphosphate deaminase 5 186 6.2E-47 T 25-04-2016 IPR011962 Deoxycytidine triphosphate deaminase GO:0006229|GO:0008829 KEGG: 00240+3.5.4.13|MetaCyc: PWY-7187|UniPathway: UPA00610 RJP_RS02160 5dab28f900abf4626064aaad412ed23f 281 ProDom PD317075 PRECURSOR RP296 SIGNAL 8 281 9.0E-158 T 25-04-2016 IPR020531 Uncharacterised protein family, RP296 RJP_RS02160 5dab28f900abf4626064aaad412ed23f 281 Pfam PF11019 Protein of unknown function (DUF2608) 39 275 1.1E-60 T 25-04-2016 IPR022565 Protein of unknown function DUF2608 RJP_RS01140 62a3e64ebaa5ce17241c19abddacc8b5 93 Pfam PF07896 Protein of unknown function (DUF1674) 62 93 4.8E-12 T 25-04-2016 IPR012875 Protein of unknown function DUF1674 RJP_RS01140 62a3e64ebaa5ce17241c19abddacc8b5 93 PANTHER PTHR28524 65 93 1.2E-14 T 25-04-2016 RJP_RS01140 62a3e64ebaa5ce17241c19abddacc8b5 93 PANTHER PTHR28524:SF3 65 93 1.2E-14 T 25-04-2016 RJP_RS01140 62a3e64ebaa5ce17241c19abddacc8b5 93 TIGRFAM TIGR01045 RPE1: rickettsial palindromic element RPE1 domain 8 55 6.2E-28 T 25-04-2016 IPR005728 Rickettsial palindromic element RJP_RS02970 2438bfcf5f045c86c285dca0b8a8fe95 454 SUPERFAMILY SSF51261 156 409 4.5E-66 T 25-04-2016 IPR011055 Duplicated hybrid motif RJP_RS02970 2438bfcf5f045c86c285dca0b8a8fe95 454 Gene3D G3DSA:2.70.70.10 265 410 2.4E-46 T 25-04-2016 RJP_RS02970 2438bfcf5f045c86c285dca0b8a8fe95 454 PANTHER PTHR21666 288 410 2.1E-42 T 25-04-2016 RJP_RS02970 2438bfcf5f045c86c285dca0b8a8fe95 454 Pfam PF01551 Peptidase family M23 311 407 3.4E-31 T 25-04-2016 IPR016047 Peptidase M23 RJP_RS02490 5d3dd5033dbe8d673a43e57a00cdd1e4 264 ProDom PD187055 MEMBRANE OUTER PRECURSOR SIGNAL EXPORTED CT371 CPN1072 CPN1073/CP0776/CPJ1073/CPB1118 CP0777 CPJ1072 122 239 1.0E-6 T 25-04-2016 RJP_RS02490 5d3dd5033dbe8d673a43e57a00cdd1e4 264 Pfam PF11019 Protein of unknown function (DUF2608) 7 250 1.6E-57 T 25-04-2016 IPR022565 Protein of unknown function DUF2608 RJP_RS02490 5d3dd5033dbe8d673a43e57a00cdd1e4 264 Gene3D G3DSA:3.40.50.1000 25 199 2.1E-5 T 25-04-2016 IPR023214 HAD-like domain RJP_RS02490 5d3dd5033dbe8d673a43e57a00cdd1e4 264 SUPERFAMILY SSF56784 155 199 4.42E-5 T 25-04-2016 IPR023214 HAD-like domain RJP_RS02490 5d3dd5033dbe8d673a43e57a00cdd1e4 264 SUPERFAMILY SSF56784 23 121 4.42E-5 T 25-04-2016 IPR023214 HAD-like domain RJP_RS05035 75188677bb46d7cd20081352cb641cd8 200 ProDom PD209215 WITH SIMILARITIES RP592 1 200 1.0E-111 T 25-04-2016 RJP_RS02975 453011f21fb6eb0ab3d08ea6bb087954 202 PANTHER PTHR33695:SF1 18 173 4.2E-39 T 25-04-2016 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 UniPathway: UPA00665 RJP_RS02975 453011f21fb6eb0ab3d08ea6bb087954 202 Hamap MF_00161 Lipoprotein signal peptidase [lspA]. 6 165 15.358 T 25-04-2016 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 UniPathway: UPA00665 RJP_RS02975 453011f21fb6eb0ab3d08ea6bb087954 202 PRINTS PR00781 Lipoprotein signal peptidase family (A8) signature 140 156 3.7E-15 T 25-04-2016 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 UniPathway: UPA00665 RJP_RS02975 453011f21fb6eb0ab3d08ea6bb087954 202 PRINTS PR00781 Lipoprotein signal peptidase family (A8) signature 104 119 3.7E-15 T 25-04-2016 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 UniPathway: UPA00665 RJP_RS02975 453011f21fb6eb0ab3d08ea6bb087954 202 PRINTS PR00781 Lipoprotein signal peptidase family (A8) signature 58 66 3.7E-15 T 25-04-2016 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 UniPathway: UPA00665 RJP_RS02975 453011f21fb6eb0ab3d08ea6bb087954 202 Pfam PF01252 Signal peptidase (SPase) II 18 155 4.3E-34 T 25-04-2016 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 UniPathway: UPA00665 RJP_RS02975 453011f21fb6eb0ab3d08ea6bb087954 202 TIGRFAM TIGR00077 lspA: signal peptidase II 16 162 2.7E-34 T 25-04-2016 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 UniPathway: UPA00665 RJP_RS02975 453011f21fb6eb0ab3d08ea6bb087954 202 ProSitePatterns PS00855 Signal peptidases II signature. 107 119 - T 25-04-2016 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 UniPathway: UPA00665 RJP_RS02975 453011f21fb6eb0ab3d08ea6bb087954 202 PANTHER PTHR33695 18 173 4.2E-39 T 25-04-2016 RJP_RS06260 7cfb560a9964a751e867b4fcca90d695 493 PANTHER PTHR22773 1 490 1.6E-196 T 25-04-2016 RJP_RS06260 7cfb560a9964a751e867b4fcca90d695 493 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 331 350 2.0E-46 T 25-04-2016 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 RJP_RS06260 7cfb560a9964a751e867b4fcca90d695 493 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 142 161 2.0E-46 T 25-04-2016 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 RJP_RS06260 7cfb560a9964a751e867b4fcca90d695 493 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 383 409 2.0E-46 T 25-04-2016 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 RJP_RS06260 7cfb560a9964a751e867b4fcca90d695 493 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 172 196 2.0E-46 T 25-04-2016 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 RJP_RS06260 7cfb560a9964a751e867b4fcca90d695 493 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 243 267 2.0E-46 T 25-04-2016 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 RJP_RS06260 7cfb560a9964a751e867b4fcca90d695 493 PANTHER PTHR22773:SF40 1 490 1.6E-196 T 25-04-2016 RJP_RS06260 7cfb560a9964a751e867b4fcca90d695 493 TIGRFAM TIGR01972 NDH_I_M: proton-translocating NADH-quinone oxidoreductase, chain M 8 491 5.8E-188 T 25-04-2016 IPR010227 NADH-quinone oxidoreductase, chain M/4 GO:0008137|GO:0042773|GO:0055114 RJP_RS06260 7cfb560a9964a751e867b4fcca90d695 493 Pfam PF00361 Proton-conducting membrane transporter 136 423 2.4E-83 T 25-04-2016 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit Reactome: REACT_6305 RJP_RS04255 597b2e7c84c5ebf2b1ce9351f856ee10 142 TIGRFAM TIGR00738 rrf2_super: Rrf2 family protein 1 130 1.3E-36 T 25-04-2016 IPR000944 Transcription regulator Rrf2-type RJP_RS04255 597b2e7c84c5ebf2b1ce9351f856ee10 142 ProSitePatterns PS01332 Rrf2-type HTH domain signature. 48 66 - T 25-04-2016 IPR030489 Transcription regulator Rrf2-type, conserved site RJP_RS04255 597b2e7c84c5ebf2b1ce9351f856ee10 142 Pfam PF02082 Transcriptional regulator 1 81 6.7E-24 T 25-04-2016 IPR000944 Transcription regulator Rrf2-type RJP_RS04255 597b2e7c84c5ebf2b1ce9351f856ee10 142 SUPERFAMILY SSF46785 2 130 6.61E-35 T 25-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RJP_RS04255 597b2e7c84c5ebf2b1ce9351f856ee10 142 Gene3D G3DSA:1.10.10.10 1 131 1.5E-41 T 25-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RJP_RS04255 597b2e7c84c5ebf2b1ce9351f856ee10 142 PANTHER PTHR33221 2 129 6.6E-52 T 25-04-2016 RJP_RS04255 597b2e7c84c5ebf2b1ce9351f856ee10 142 PANTHER PTHR33221:SF4 2 129 6.6E-52 T 25-04-2016 RJP_RS04725 93e6c2fae4990401cffbd184fb2bdbbf 289 TIGRFAM TIGR01983 UbiG: 3-demethylubiquinone-9 3-O-methyltransferase 8 277 2.4E-87 T 25-04-2016 IPR010233 Ubiquinone biosynthesis O-methyltransferase GO:0006744|GO:0008425 KEGG: 00130+2.1.1.222+2.1.1.64|KEGG: 00340+2.1.1.22|MetaCyc: PWY-5855|MetaCyc: PWY-5856|MetaCyc: PWY-5857|MetaCyc: PWY-5870|MetaCyc: PWY-5871|MetaCyc: PWY-5872|MetaCyc: PWY-5873|MetaCyc: PWY-6708|MetaCyc: PWY-7230|MetaCyc: PWY-7233|UniPathway: UPA00232 RJP_RS04725 93e6c2fae4990401cffbd184fb2bdbbf 289 SUPERFAMILY SSF53335 13 44 1.26E-39 T 25-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RJP_RS04725 93e6c2fae4990401cffbd184fb2bdbbf 289 SUPERFAMILY SSF53335 98 267 1.26E-39 T 25-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RJP_RS04725 93e6c2fae4990401cffbd184fb2bdbbf 289 Hamap MF_00472 Ubiquinone biosynthesis O-methyltransferase [ubiG]. 6 283 36.324 T 25-04-2016 IPR010233 Ubiquinone biosynthesis O-methyltransferase GO:0006744|GO:0008425 KEGG: 00130+2.1.1.222+2.1.1.64|KEGG: 00340+2.1.1.22|MetaCyc: PWY-5855|MetaCyc: PWY-5856|MetaCyc: PWY-5857|MetaCyc: PWY-5870|MetaCyc: PWY-5871|MetaCyc: PWY-5872|MetaCyc: PWY-5873|MetaCyc: PWY-6708|MetaCyc: PWY-7230|MetaCyc: PWY-7233|UniPathway: UPA00232 RJP_RS04725 93e6c2fae4990401cffbd184fb2bdbbf 289 PANTHER PTHR10108 99 276 2.8E-61 T 25-04-2016 RJP_RS04725 93e6c2fae4990401cffbd184fb2bdbbf 289 PANTHER PTHR10108 2 53 2.8E-61 T 25-04-2016 RJP_RS04725 93e6c2fae4990401cffbd184fb2bdbbf 289 Gene3D G3DSA:3.40.50.150 32 44 6.6E-41 T 25-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RJP_RS04725 93e6c2fae4990401cffbd184fb2bdbbf 289 Gene3D G3DSA:3.40.50.150 99 276 6.6E-41 T 25-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RJP_RS04725 93e6c2fae4990401cffbd184fb2bdbbf 289 Pfam PF13489 Methyltransferase domain 99 244 2.5E-17 T 25-04-2016 RJP_RS04725 93e6c2fae4990401cffbd184fb2bdbbf 289 PANTHER PTHR10108:SF902 99 276 2.8E-61 T 25-04-2016 RJP_RS04725 93e6c2fae4990401cffbd184fb2bdbbf 289 PANTHER PTHR10108:SF902 2 53 2.8E-61 T 25-04-2016 RJP_RS04725 93e6c2fae4990401cffbd184fb2bdbbf 289 TIGRFAM TIGR01045 RPE1: rickettsial palindromic element RPE1 domain 50 97 1.0E-23 T 25-04-2016 IPR005728 Rickettsial palindromic element RJP_RS00055 ceb5406d91ee8e943ab01ae850628604 346 PANTHER PTHR22572:SF117 99 309 2.3E-45 T 25-04-2016 RJP_RS00055 ceb5406d91ee8e943ab01ae850628604 346 Gene3D G3DSA:2.160.10.10 222 335 9.3E-26 T 25-04-2016 RJP_RS00055 ceb5406d91ee8e943ab01ae850628604 346 Pfam PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD 34 102 1.6E-18 T 25-04-2016 IPR020573 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, non-repeat region GO:0009245|GO:0016747 UniPathway: UPA00973 RJP_RS00055 ceb5406d91ee8e943ab01ae850628604 346 Gene3D G3DSA:2.160.10.10 123 221 1.7E-23 T 25-04-2016 RJP_RS00055 ceb5406d91ee8e943ab01ae850628604 346 TIGRFAM TIGR01853 lipid_A_lpxD: UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase LpxD 31 340 1.1E-101 T 25-04-2016 IPR007691 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase LpxD GO:0009245|GO:0016410 UniPathway: UPA00973 RJP_RS00055 ceb5406d91ee8e943ab01ae850628604 346 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 124 159 1.4E-11 T 25-04-2016 IPR001451 Hexapeptide repeat RJP_RS00055 ceb5406d91ee8e943ab01ae850628604 346 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 161 193 0.0015 T 25-04-2016 IPR001451 Hexapeptide repeat RJP_RS00055 ceb5406d91ee8e943ab01ae850628604 346 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 236 271 1.5E-6 T 25-04-2016 IPR001451 Hexapeptide repeat RJP_RS00055 ceb5406d91ee8e943ab01ae850628604 346 SUPERFAMILY SSF51161 44 329 5.08E-75 T 25-04-2016 IPR011004 Trimeric LpxA-like RJP_RS00055 ceb5406d91ee8e943ab01ae850628604 346 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 151 179 - T 25-04-2016 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: REACT_17015 RJP_RS00055 ceb5406d91ee8e943ab01ae850628604 346 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 133 161 - T 25-04-2016 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: REACT_17015 RJP_RS00055 ceb5406d91ee8e943ab01ae850628604 346 PANTHER PTHR22572 99 309 2.3E-45 T 25-04-2016 RJP_RS00055 ceb5406d91ee8e943ab01ae850628604 346 Hamap MF_00523 UDP-3-O-(3-hydroxymyristoyl)glucosamine N-acyltransferase [lpxD]. 6 339 33.484 T 25-04-2016 IPR007691 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase LpxD GO:0009245|GO:0016410 UniPathway: UPA00973 RJP_RS01815 5b76d6a6715bda2a3f8873356aeaaa14 175 PANTHER PTHR11961 9 169 3.1E-55 T 25-04-2016 IPR002327 Cytochrome c, class IA/ IB GO:0009055|GO:0020037 RJP_RS01815 5b76d6a6715bda2a3f8873356aeaaa14 175 PRINTS PR00604 Class IA and IB cytochrome C signature 83 90 2.2E-15 T 25-04-2016 IPR002327 Cytochrome c, class IA/ IB GO:0009055|GO:0020037 RJP_RS01815 5b76d6a6715bda2a3f8873356aeaaa14 175 PRINTS PR00604 Class IA and IB cytochrome C signature 162 170 2.2E-15 T 25-04-2016 IPR002327 Cytochrome c, class IA/ IB GO:0009055|GO:0020037 RJP_RS01815 5b76d6a6715bda2a3f8873356aeaaa14 175 PRINTS PR00604 Class IA and IB cytochrome C signature 145 155 2.2E-15 T 25-04-2016 IPR002327 Cytochrome c, class IA/ IB GO:0009055|GO:0020037 RJP_RS01815 5b76d6a6715bda2a3f8873356aeaaa14 175 PRINTS PR00604 Class IA and IB cytochrome C signature 126 142 2.2E-15 T 25-04-2016 IPR002327 Cytochrome c, class IA/ IB GO:0009055|GO:0020037 RJP_RS01815 5b76d6a6715bda2a3f8873356aeaaa14 175 PRINTS PR00604 Class IA and IB cytochrome C signature 96 111 2.2E-15 T 25-04-2016 IPR002327 Cytochrome c, class IA/ IB GO:0009055|GO:0020037 RJP_RS01815 5b76d6a6715bda2a3f8873356aeaaa14 175 PRINTS PR00604 Class IA and IB cytochrome C signature 112 122 2.2E-15 T 25-04-2016 IPR002327 Cytochrome c, class IA/ IB GO:0009055|GO:0020037 RJP_RS01815 5b76d6a6715bda2a3f8873356aeaaa14 175 Pfam PF00034 Cytochrome c 74 170 9.6E-6 T 25-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 RJP_RS01815 5b76d6a6715bda2a3f8873356aeaaa14 175 SUPERFAMILY SSF46626 71 170 1.34E-27 T 25-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 RJP_RS01815 5b76d6a6715bda2a3f8873356aeaaa14 175 PANTHER PTHR11961:SF6 9 169 3.1E-55 T 25-04-2016 RJP_RS01815 5b76d6a6715bda2a3f8873356aeaaa14 175 Gene3D G3DSA:1.10.760.10 71 171 1.6E-32 T 25-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 RJP_RS00980 a294f5bf3eed1a7d4dff39273eee2189 169 Pfam PF00466 Ribosomal protein L10 3 98 5.4E-25 T 25-04-2016 IPR001790 Ribosomal protein L10P GO:0005622|GO:0042254 RJP_RS00980 a294f5bf3eed1a7d4dff39273eee2189 169 PANTHER PTHR11560 3 168 1.6E-52 T 25-04-2016 RJP_RS00980 a294f5bf3eed1a7d4dff39273eee2189 169 Hamap MF_00362 50S ribosomal protein L10 [rplJ]. 1 158 25.52 T 25-04-2016 IPR022973 Ribosomal protein L10 RJP_RS00980 a294f5bf3eed1a7d4dff39273eee2189 169 ProDom PD968187 BETA-DEFENSIN ANTIBIOTIC PRECURSOR ANTIMICROBIAL DEFENSIN BETA SIGNAL DEFENSIN BD-32 DEFB-32 2 146 2.0E-8 T 25-04-2016 RJP_RS00980 a294f5bf3eed1a7d4dff39273eee2189 169 ProSitePatterns PS01109 Ribosomal protein L10 signature. 6 40 - T 25-04-2016 IPR002363 Ribosomal protein L10, eubacterial, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 RJP_RS00980 a294f5bf3eed1a7d4dff39273eee2189 169 SUPERFAMILY SSF160369 3 168 2.48E-52 T 25-04-2016 RJP_RS01900 574cfdf39353a1c5ad87ee074029fcf7 354 Pfam PF04039 Domain related to MnhB subunit of Na+/H+ antiporter 223 343 8.9E-23 T 25-04-2016 IPR007182 Na+/H+ antiporter MnhB subunit-related protein RJP_RS01900 574cfdf39353a1c5ad87ee074029fcf7 354 PANTHER PTHR33932:SF1 27 195 1.9E-35 T 25-04-2016 RJP_RS01900 574cfdf39353a1c5ad87ee074029fcf7 354 Pfam PF13244 Domain of unknown function (DUF4040) 30 94 5.9E-18 T 25-04-2016 IPR025383 Domain of unknown function DUF4040 RJP_RS01900 574cfdf39353a1c5ad87ee074029fcf7 354 PANTHER PTHR33932 27 195 1.9E-35 T 25-04-2016 RJP_RS06960 74792cbcace0d8f9d92cc7bdb3b4b12c 279 Pfam PF01218 Coproporphyrinogen III oxidase 11 278 9.5E-97 T 25-04-2016 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-5531|MetaCyc: PWY-7159|UniPathway: UPA00251 RJP_RS06960 74792cbcace0d8f9d92cc7bdb3b4b12c 279 PRINTS PR00073 Coprogen oxidase signature 127 149 1.8E-45 T 25-04-2016 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-5531|MetaCyc: PWY-7159|UniPathway: UPA00251 RJP_RS06960 74792cbcace0d8f9d92cc7bdb3b4b12c 279 PRINTS PR00073 Coprogen oxidase signature 264 279 1.8E-45 T 25-04-2016 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-5531|MetaCyc: PWY-7159|UniPathway: UPA00251 RJP_RS06960 74792cbcace0d8f9d92cc7bdb3b4b12c 279 PRINTS PR00073 Coprogen oxidase signature 164 193 1.8E-45 T 25-04-2016 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-5531|MetaCyc: PWY-7159|UniPathway: UPA00251 RJP_RS06960 74792cbcace0d8f9d92cc7bdb3b4b12c 279 PRINTS PR00073 Coprogen oxidase signature 236 263 1.8E-45 T 25-04-2016 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-5531|MetaCyc: PWY-7159|UniPathway: UPA00251 RJP_RS06960 74792cbcace0d8f9d92cc7bdb3b4b12c 279 PRINTS PR00073 Coprogen oxidase signature 40 56 1.8E-45 T 25-04-2016 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-5531|MetaCyc: PWY-7159|UniPathway: UPA00251 RJP_RS06960 74792cbcace0d8f9d92cc7bdb3b4b12c 279 Gene3D G3DSA:3.40.1500.10 5 278 3.2E-111 T 25-04-2016 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-5531|MetaCyc: PWY-7159|UniPathway: UPA00251 RJP_RS06960 74792cbcace0d8f9d92cc7bdb3b4b12c 279 ProSitePatterns PS01021 Coproporphyrinogen III oxidase signature. 168 192 - T 25-04-2016 IPR018375 Coproporphyrinogen III oxidase, conserved site GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-5531|MetaCyc: PWY-7159|UniPathway: UPA00251 RJP_RS06960 74792cbcace0d8f9d92cc7bdb3b4b12c 279 PANTHER PTHR10755 12 278 6.4E-124 T 25-04-2016 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-5531|MetaCyc: PWY-7159|UniPathway: UPA00251 RJP_RS06960 74792cbcace0d8f9d92cc7bdb3b4b12c 279 SUPERFAMILY SSF102886 5 278 6.54E-111 T 25-04-2016 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-5531|MetaCyc: PWY-7159|UniPathway: UPA00251 RJP_RS06960 74792cbcace0d8f9d92cc7bdb3b4b12c 279 Hamap MF_00333 Oxygen-dependent coproporphyrinogen-III oxidase [hemF]. 3 279 53.1 T 25-04-2016 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-5531|MetaCyc: PWY-7159|UniPathway: UPA00251 RJP_RS06960 74792cbcace0d8f9d92cc7bdb3b4b12c 279 PIRSF PIRSF000166 2 279 3.9E-113 T 25-04-2016 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-5531|MetaCyc: PWY-7159|UniPathway: UPA00251 RJP_RS03235 fb701c6c7a60c0eeff12bd7c21a0576f 560 PANTHER PTHR11203:SF22 4 557 6.8E-156 T 25-04-2016 IPR004613 Ribonuclease J GO:0003723|GO:0046872 RJP_RS03235 fb701c6c7a60c0eeff12bd7c21a0576f 560 TIGRFAM TIGR00649 MG423: beta-CASP ribonuclease, RNase J family 15 554 3.8E-121 T 25-04-2016 IPR004613 Ribonuclease J GO:0003723|GO:0046872 RJP_RS03235 fb701c6c7a60c0eeff12bd7c21a0576f 560 Gene3D G3DSA:3.60.15.10 10 261 2.9E-66 T 25-04-2016 IPR001279 Metallo-beta-lactamase RJP_RS03235 fb701c6c7a60c0eeff12bd7c21a0576f 560 Pfam PF07521 Zn-dependent metallo-hydrolase RNA specificity domain 357 413 6.5E-11 T 25-04-2016 IPR011108 Zn-dependent metallo-hydrolase, RNA specificity domain RJP_RS03235 fb701c6c7a60c0eeff12bd7c21a0576f 560 SMART SM00849 25 220 1.5E-19 T 25-04-2016 IPR001279 Metallo-beta-lactamase RJP_RS03235 fb701c6c7a60c0eeff12bd7c21a0576f 560 Pfam PF12706 Beta-lactamase superfamily domain 37 174 1.7E-9 T 25-04-2016 IPR001279 Metallo-beta-lactamase RJP_RS03235 fb701c6c7a60c0eeff12bd7c21a0576f 560 PANTHER PTHR11203 4 557 6.8E-156 T 25-04-2016 RJP_RS03235 fb701c6c7a60c0eeff12bd7c21a0576f 560 SUPERFAMILY SSF56281 15 424 4.15E-80 T 25-04-2016 IPR001279 Metallo-beta-lactamase RJP_RS03625 286fa7bf2b1bb49d73a521f9d1572848 148 Hamap MF_00080 Translation initiation factor IF-3 [infC]. 1 146 23.129 T 25-04-2016 IPR001288 Translation initiation factor 3 GO:0003743|GO:0006413 RJP_RS03625 286fa7bf2b1bb49d73a521f9d1572848 148 Pfam PF00707 Translation initiation factor IF-3, C-terminal domain 60 143 3.2E-31 T 25-04-2016 IPR019815 Translation initiation factor 3, C-terminal GO:0006413 RJP_RS03625 286fa7bf2b1bb49d73a521f9d1572848 148 SUPERFAMILY SSF54364 2 54 1.83E-20 T 25-04-2016 IPR019814 Translation initiation factor 3, N-terminal GO:0003743|GO:0006413 RJP_RS03625 286fa7bf2b1bb49d73a521f9d1572848 148 Gene3D G3DSA:3.30.110.10 55 144 2.9E-31 T 25-04-2016 IPR019815 Translation initiation factor 3, C-terminal GO:0006413 RJP_RS03625 286fa7bf2b1bb49d73a521f9d1572848 148 SUPERFAMILY SSF55200 61 144 2.22E-27 T 25-04-2016 IPR019815 Translation initiation factor 3, C-terminal GO:0006413 RJP_RS03625 286fa7bf2b1bb49d73a521f9d1572848 148 Pfam PF05198 Translation initiation factor IF-3, N-terminal domain 3 52 5.6E-21 T 25-04-2016 IPR019814 Translation initiation factor 3, N-terminal GO:0003743|GO:0006413 RJP_RS03625 286fa7bf2b1bb49d73a521f9d1572848 148 ProSitePatterns PS00938 Initiation factor 3 signature. 34 47 - T 25-04-2016 IPR019813 Translation initiation factor 3, conserved site GO:0003743|GO:0006413 RJP_RS03625 286fa7bf2b1bb49d73a521f9d1572848 148 Gene3D G3DSA:3.10.20.80 1 54 2.5E-24 T 25-04-2016 IPR019814 Translation initiation factor 3, N-terminal GO:0003743|GO:0006413 RJP_RS03625 286fa7bf2b1bb49d73a521f9d1572848 148 TIGRFAM TIGR00168 infC: translation initiation factor IF-3 2 144 1.3E-53 T 25-04-2016 IPR001288 Translation initiation factor 3 GO:0003743|GO:0006413 RJP_RS03625 286fa7bf2b1bb49d73a521f9d1572848 148 PANTHER PTHR10938 1 143 1.9E-50 T 25-04-2016 IPR001288 Translation initiation factor 3 GO:0003743|GO:0006413 RJP_RS00100 5a73e5a1dbd9b511c17e3ba077bd012a 143 PANTHER PTHR33540 4 131 5.6E-36 T 25-04-2016 RJP_RS00100 5a73e5a1dbd9b511c17e3ba077bd012a 143 SUPERFAMILY SSF52540 17 131 1.07E-17 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RJP_RS00100 5a73e5a1dbd9b511c17e3ba077bd012a 143 Gene3D G3DSA:3.40.50.300 2 140 4.8E-52 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RJP_RS00100 5a73e5a1dbd9b511c17e3ba077bd012a 143 TIGRFAM TIGR00150 T6A_YjeE: tRNA threonylcarbamoyl adenosine modification protein YjeE 5 129 2.0E-30 T 25-04-2016 IPR003442 tRNA threonylcarbamoyl adenosine modification protein TsaE GO:0002949 RJP_RS00100 5a73e5a1dbd9b511c17e3ba077bd012a 143 Pfam PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE 5 124 3.9E-35 T 25-04-2016 IPR003442 tRNA threonylcarbamoyl adenosine modification protein TsaE GO:0002949 RJP_RS00225 12443fdb9a69b4bdc01050298616c972 164 PANTHER PTHR22778 4 137 6.4E-21 T 25-04-2016 RJP_RS00225 12443fdb9a69b4bdc01050298616c972 164 PANTHER PTHR22778:SF16 4 137 6.4E-21 T 25-04-2016 RJP_RS00225 12443fdb9a69b4bdc01050298616c972 164 SUPERFAMILY SSF53597 2 161 7.33E-44 T 25-04-2016 IPR024072 Dihydrofolate reductase-like domain RJP_RS00225 12443fdb9a69b4bdc01050298616c972 164 PRINTS PR00070 Dihydrofolate reductase signature 31 39 4.3E-10 T 25-04-2016 IPR012259 Dihydrofolate reductase GO:0004146|GO:0006545|GO:0009165|GO:0050661|GO:0055114 KEGG: 00670+1.5.1.3|KEGG: 00790+1.5.1.3|MetaCyc: PWY-3841|MetaCyc: PWY-6614|UniPathway: UPA00077 RJP_RS00225 12443fdb9a69b4bdc01050298616c972 164 PRINTS PR00070 Dihydrofolate reductase signature 17 27 4.3E-10 T 25-04-2016 IPR012259 Dihydrofolate reductase GO:0004146|GO:0006545|GO:0009165|GO:0050661|GO:0055114 KEGG: 00670+1.5.1.3|KEGG: 00790+1.5.1.3|MetaCyc: PWY-3841|MetaCyc: PWY-6614|UniPathway: UPA00077 RJP_RS00225 12443fdb9a69b4bdc01050298616c972 164 PRINTS PR00070 Dihydrofolate reductase signature 44 55 4.3E-10 T 25-04-2016 IPR012259 Dihydrofolate reductase GO:0004146|GO:0006545|GO:0009165|GO:0050661|GO:0055114 KEGG: 00670+1.5.1.3|KEGG: 00790+1.5.1.3|MetaCyc: PWY-3841|MetaCyc: PWY-6614|UniPathway: UPA00077 RJP_RS00225 12443fdb9a69b4bdc01050298616c972 164 PRINTS PR00070 Dihydrofolate reductase signature 99 113 4.3E-10 T 25-04-2016 IPR012259 Dihydrofolate reductase GO:0004146|GO:0006545|GO:0009165|GO:0050661|GO:0055114 KEGG: 00670+1.5.1.3|KEGG: 00790+1.5.1.3|MetaCyc: PWY-3841|MetaCyc: PWY-6614|UniPathway: UPA00077 RJP_RS00225 12443fdb9a69b4bdc01050298616c972 164 Gene3D G3DSA:3.40.430.10 1 162 2.2E-47 T 25-04-2016 IPR024072 Dihydrofolate reductase-like domain RJP_RS00225 12443fdb9a69b4bdc01050298616c972 164 Pfam PF00186 Dihydrofolate reductase 6 151 1.4E-29 T 25-04-2016 IPR001796 Dihydrofolate reductase domain GO:0004146|GO:0006545|GO:0009165|GO:0055114 KEGG: 00670+1.5.1.3|KEGG: 00790+1.5.1.3|MetaCyc: PWY-3841|MetaCyc: PWY-6614|UniPathway: UPA00077 RJP_RS02550 5e74e5079018c1fc4907314315c8a599 165 TIGRFAM TIGR02273 16S_RimM: 16S rRNA processing protein RimM 8 163 5.1E-45 T 25-04-2016 IPR011961 16S rRNA processing protein RimM GO:0005840|GO:0006364|GO:0043022 RJP_RS02550 5e74e5079018c1fc4907314315c8a599 165 SUPERFAMILY SSF50447 6 91 6.0E-14 T 25-04-2016 IPR009000 Translation protein, beta-barrel domain RJP_RS02550 5e74e5079018c1fc4907314315c8a599 165 Hamap MF_00014 Ribosome maturation factor RimM [rimM]. 7 165 18.041 T 25-04-2016 IPR011961 16S rRNA processing protein RimM GO:0005840|GO:0006364|GO:0043022 RJP_RS02550 5e74e5079018c1fc4907314315c8a599 165 Gene3D G3DSA:2.30.30.240 97 148 1.7E-9 T 25-04-2016 RJP_RS02550 5e74e5079018c1fc4907314315c8a599 165 Pfam PF05239 PRC-barrel domain 94 158 6.7E-9 T 25-04-2016 IPR027275 PRC-barrel domain RJP_RS02550 5e74e5079018c1fc4907314315c8a599 165 Pfam PF01782 RimM N-terminal domain 10 87 3.6E-13 T 25-04-2016 IPR002676 RimM protein GO:0006364 RJP_RS02550 5e74e5079018c1fc4907314315c8a599 165 PANTHER PTHR33692 5 155 4.4E-28 T 25-04-2016 RJP_RS02550 5e74e5079018c1fc4907314315c8a599 165 Gene3D G3DSA:2.40.30.60 2 91 2.3E-15 T 25-04-2016 IPR002676 RimM protein GO:0006364 RJP_RS02550 5e74e5079018c1fc4907314315c8a599 165 SUPERFAMILY SSF50346 97 153 2.75E-11 T 25-04-2016 IPR011033 PRC-barrel-like RJP_RS03490 ff5c004a2a32483f634a71bfc64af1bb 319 Gene3D G3DSA:3.10.580.10 195 315 1.5E-36 T 25-04-2016 RJP_RS03490 ff5c004a2a32483f634a71bfc64af1bb 319 PIRSF PIRSF004692 1 319 4.4E-123 T 25-04-2016 IPR004800 Phosphosugar isomerase, KdsD/KpsF-type GO:0005975|GO:0016853 RJP_RS03490 ff5c004a2a32483f634a71bfc64af1bb 319 PANTHER PTHR11911 22 315 2.1E-37 T 25-04-2016 RJP_RS03490 ff5c004a2a32483f634a71bfc64af1bb 319 SMART SM00116 271 318 0.028 T 25-04-2016 IPR000644 CBS domain RJP_RS03490 ff5c004a2a32483f634a71bfc64af1bb 319 SMART SM00116 208 256 2.8E-5 T 25-04-2016 IPR000644 CBS domain RJP_RS03490 ff5c004a2a32483f634a71bfc64af1bb 319 SUPERFAMILY SSF53697 10 318 2.2E-60 T 25-04-2016 RJP_RS03490 ff5c004a2a32483f634a71bfc64af1bb 319 Pfam PF00571 CBS domain 202 256 1.5E-7 T 25-04-2016 IPR000644 CBS domain RJP_RS03490 ff5c004a2a32483f634a71bfc64af1bb 319 Pfam PF00571 CBS domain 265 315 1.2E-10 T 25-04-2016 IPR000644 CBS domain RJP_RS03490 ff5c004a2a32483f634a71bfc64af1bb 319 Gene3D G3DSA:3.40.50.10490 10 191 6.4E-44 T 25-04-2016 RJP_RS03490 ff5c004a2a32483f634a71bfc64af1bb 319 Pfam PF01380 SIS domain 41 169 4.5E-26 T 25-04-2016 IPR001347 Sugar isomerase (SIS) GO:0005975|GO:0030246 Reactome: REACT_17015 RJP_RS03490 ff5c004a2a32483f634a71bfc64af1bb 319 TIGRFAM TIGR00393 kpsF: sugar isomerase, KpsF/GutQ family 45 309 2.8E-85 T 25-04-2016 IPR004800 Phosphosugar isomerase, KdsD/KpsF-type GO:0005975|GO:0016853 RJP_RS03490 ff5c004a2a32483f634a71bfc64af1bb 319 PANTHER PTHR11911:SF90 22 315 2.1E-37 T 25-04-2016 RJP_RS04070 2d22983f142e9f9b99b6714738507535 372 Pfam PF00266 Aminotransferase class-V 2 359 5.0E-52 T 25-04-2016 IPR000192 Aminotransferase class V domain RJP_RS04070 2d22983f142e9f9b99b6714738507535 372 PANTHER PTHR11601:SF45 1 366 3.5E-106 T 25-04-2016 RJP_RS04070 2d22983f142e9f9b99b6714738507535 372 ProSitePatterns PS00595 Aminotransferases class-V pyridoxal-phosphate attachment site. 187 207 - T 25-04-2016 IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site RJP_RS04070 2d22983f142e9f9b99b6714738507535 372 Gene3D G3DSA:3.40.640.10 14 240 3.7E-56 T 25-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 RJP_RS04070 2d22983f142e9f9b99b6714738507535 372 SUPERFAMILY SSF53383 1 367 7.98E-83 T 25-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase RJP_RS04070 2d22983f142e9f9b99b6714738507535 372 PANTHER PTHR11601 1 366 3.5E-106 T 25-04-2016 RJP_RS04070 2d22983f142e9f9b99b6714738507535 372 Gene3D G3DSA:3.90.1150.10 241 366 7.3E-36 T 25-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 RJP_RS04070 2d22983f142e9f9b99b6714738507535 372 PIRSF PIRSF005572 1 370 1.7E-111 T 25-04-2016 IPR016454 Cysteine desulfurase KEGG: 00730+2.8.1.7|MetaCyc: PWY-6823|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7250 RJP_RS04795 2c5ce2a4f81bc8ebab34c274bb45320d 203 TIGRFAM TIGR02396 diverge_rpsU: rpsU-divergently transcribed protein 11 189 1.2E-61 T 25-04-2016 IPR012762 Ubiquinone biosynthesis protein COQ9 GO:0006744 UniPathway: UPA00232 RJP_RS04795 2c5ce2a4f81bc8ebab34c274bb45320d 203 Pfam PF08511 COQ9 118 182 8.1E-20 T 25-04-2016 IPR013718 COQ9 UniPathway: UPA00232 RJP_RS06050 5c5d614b0d46d3255b9adda638b758cb 241 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 135 163 - T 25-04-2016 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 RJP_RS06050 5c5d614b0d46d3255b9adda638b758cb 241 SUPERFAMILY SSF51735 6 240 1.82E-83 T 25-04-2016 IPR016040 NAD(P)-binding domain RJP_RS06050 5c5d614b0d46d3255b9adda638b758cb 241 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 13 238 2.3E-61 T 25-04-2016 RJP_RS06050 5c5d614b0d46d3255b9adda638b758cb 241 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 7 184 0.0043 T 25-04-2016 RJP_RS06050 5c5d614b0d46d3255b9adda638b758cb 241 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 75 86 6.8E-13 T 25-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RJP_RS06050 5c5d614b0d46d3255b9adda638b758cb 241 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 148 167 6.8E-13 T 25-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RJP_RS06050 5c5d614b0d46d3255b9adda638b758cb 241 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 128 136 6.8E-13 T 25-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RJP_RS06050 5c5d614b0d46d3255b9adda638b758cb 241 Gene3D G3DSA:3.40.50.720 2 240 1.8E-85 T 25-04-2016 IPR016040 NAD(P)-binding domain RJP_RS06050 5c5d614b0d46d3255b9adda638b758cb 241 PANTHER PTHR24322:SF328 148 180 2.2E-49 T 25-04-2016 RJP_RS06050 5c5d614b0d46d3255b9adda638b758cb 241 PANTHER PTHR24322:SF328 11 132 2.2E-49 T 25-04-2016 RJP_RS06050 5c5d614b0d46d3255b9adda638b758cb 241 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 122 138 9.8E-47 T 25-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RJP_RS06050 5c5d614b0d46d3255b9adda638b758cb 241 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 8 25 9.8E-47 T 25-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RJP_RS06050 5c5d614b0d46d3255b9adda638b758cb 241 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 202 222 9.8E-47 T 25-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RJP_RS06050 5c5d614b0d46d3255b9adda638b758cb 241 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 169 186 9.8E-47 T 25-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RJP_RS06050 5c5d614b0d46d3255b9adda638b758cb 241 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 148 167 9.8E-47 T 25-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RJP_RS06050 5c5d614b0d46d3255b9adda638b758cb 241 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 75 86 9.8E-47 T 25-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RJP_RS06050 5c5d614b0d46d3255b9adda638b758cb 241 TIGRFAM TIGR01830 3oxo_ACP_reduc: 3-oxoacyl-[acyl-carrier-protein] reductase 10 238 1.3E-98 T 25-04-2016 IPR011284 3-oxoacyl-(acyl-carrier-protein) reductase GO:0004316|GO:0006633|GO:0051287|GO:0055114 KEGG: 00040+1.1.1.10|KEGG: 00061+1.1.1.100|KEGG: 00780+1.1.1.100|MetaCyc: PWY-5367|MetaCyc: PWY-5515|MetaCyc: PWY-5525|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWYG-321|UniPathway: UPA00094 RJP_RS06050 5c5d614b0d46d3255b9adda638b758cb 241 PANTHER PTHR24322 148 180 2.2E-49 T 25-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RJP_RS06050 5c5d614b0d46d3255b9adda638b758cb 241 PANTHER PTHR24322 11 132 2.2E-49 T 25-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RJP_RS06450 49d6e0b8a3a2d684dcda7de8c11d2694 143 Pfam PF01258 Prokaryotic dksA/traR C4-type zinc finger 97 131 4.3E-12 T 25-04-2016 IPR000962 Zinc finger, DksA/TraR C4-type GO:0008270 RJP_RS06450 49d6e0b8a3a2d684dcda7de8c11d2694 143 PANTHER PTHR33823 1 141 2.0E-41 T 25-04-2016 RJP_RS06450 49d6e0b8a3a2d684dcda7de8c11d2694 143 PANTHER PTHR33823:SF2 1 141 2.0E-41 T 25-04-2016 RJP_RS06450 49d6e0b8a3a2d684dcda7de8c11d2694 143 SUPERFAMILY SSF57716 99 136 1.85E-9 T 25-04-2016 RJP_RS06450 49d6e0b8a3a2d684dcda7de8c11d2694 143 ProSitePatterns PS01102 Prokaryotic dksA C4-type zinc finger. 102 126 - T 25-04-2016 IPR020458 Zinc finger, DksA/TraR C4-type conserved site RJP_RS06450 49d6e0b8a3a2d684dcda7de8c11d2694 143 SUPERFAMILY SSF109635 7 98 2.09E-29 T 25-04-2016 RJP_RS06450 49d6e0b8a3a2d684dcda7de8c11d2694 143 TIGRFAM TIGR02420 dksA: RNA polymerase-binding protein DksA 20 129 3.3E-45 T 25-04-2016 IPR012784 RNA polymerase-binding transcription factor DksA GO:0008270 RJP_RS06450 49d6e0b8a3a2d684dcda7de8c11d2694 143 Hamap MF_00926 RNA polymerase-binding transcription factor DksA [dksA]. 16 138 29.45 T 25-04-2016 IPR012784 RNA polymerase-binding transcription factor DksA GO:0008270 RJP_RS02900 a6b08d70b4d55540ce257f7b12faaef1 208 Pfam PF00775 Dioxygenase 54 139 2.0E-8 T 25-04-2016 IPR000627 Intradiol ring-cleavage dioxygenase, C-terminal GO:0003824|GO:0006725|GO:0008199|GO:0055114 RJP_RS02900 a6b08d70b4d55540ce257f7b12faaef1 208 Gene3D G3DSA:2.60.130.10 41 203 1.0E-22 T 25-04-2016 IPR015889 Intradiol ring-cleavage dioxygenase, core GO:0005506|GO:0016702|GO:0055114 RJP_RS02900 a6b08d70b4d55540ce257f7b12faaef1 208 SUPERFAMILY SSF49482 15 202 1.44E-25 T 25-04-2016 IPR015889 Intradiol ring-cleavage dioxygenase, core GO:0005506|GO:0016702|GO:0055114 RJP_RS06010 b853c6a1164ef8f256a296e901b20ce0 445 Gene3D G3DSA:1.20.120.430 247 270 2.1E-54 T 25-04-2016 IPR027368 tRNA modification GTPase MnmE domain 2 RJP_RS06010 b853c6a1164ef8f256a296e901b20ce0 445 Gene3D G3DSA:1.20.120.430 121 181 2.1E-54 T 25-04-2016 IPR027368 tRNA modification GTPase MnmE domain 2 RJP_RS06010 b853c6a1164ef8f256a296e901b20ce0 445 Gene3D G3DSA:1.20.120.430 383 445 2.1E-54 T 25-04-2016 IPR027368 tRNA modification GTPase MnmE domain 2 RJP_RS06010 b853c6a1164ef8f256a296e901b20ce0 445 TIGRFAM TIGR00450 mnmE_trmE_thdF: tRNA modification GTPase TrmE 10 445 2.6E-96 T 25-04-2016 IPR004520 tRNA modification GTPase MnmE GO:0003924|GO:0005525|GO:0005622|GO:0006400 RJP_RS06010 b853c6a1164ef8f256a296e901b20ce0 445 SUPERFAMILY SSF52540 187 356 1.22E-40 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RJP_RS06010 b853c6a1164ef8f256a296e901b20ce0 445 SUPERFAMILY SSF52540 71 151 1.22E-40 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RJP_RS06010 b853c6a1164ef8f256a296e901b20ce0 445 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 216 366 5.6E-20 T 25-04-2016 IPR005225 Small GTP-binding protein domain GO:0005525 RJP_RS06010 b853c6a1164ef8f256a296e901b20ce0 445 Hamap MF_00379 tRNA modification GTPase MnmE [mnmE]. 2 445 30.764 T 25-04-2016 IPR004520 tRNA modification GTPase MnmE GO:0003924|GO:0005525|GO:0005622|GO:0006400 RJP_RS06010 b853c6a1164ef8f256a296e901b20ce0 445 PANTHER PTHR11649:SF56 5 445 8.1E-156 T 25-04-2016 RJP_RS06010 b853c6a1164ef8f256a296e901b20ce0 445 Gene3D G3DSA:3.40.50.300 210 246 4.5E-7 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RJP_RS06010 b853c6a1164ef8f256a296e901b20ce0 445 Gene3D G3DSA:3.40.50.300 286 382 2.9E-7 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RJP_RS06010 b853c6a1164ef8f256a296e901b20ce0 445 SUPERFAMILY SSF116878 120 219 5.23E-46 T 25-04-2016 RJP_RS06010 b853c6a1164ef8f256a296e901b20ce0 445 SUPERFAMILY SSF116878 374 445 5.23E-46 T 25-04-2016 RJP_RS06010 b853c6a1164ef8f256a296e901b20ce0 445 Pfam PF12631 MnmE helical domain 122 442 1.0E-49 T 25-04-2016 IPR025867 MnmE, helical domain RJP_RS06010 b853c6a1164ef8f256a296e901b20ce0 445 PANTHER PTHR11649 5 445 8.1E-156 T 25-04-2016 RJP_RS06010 b853c6a1164ef8f256a296e901b20ce0 445 Pfam PF10396 GTP-binding protein TrmE N-terminus 3 119 5.3E-36 T 25-04-2016 IPR018948 GTP-binding protein TrmE, N-terminal RJP_RS06010 b853c6a1164ef8f256a296e901b20ce0 445 Pfam PF01926 50S ribosome-binding GTPase 218 330 3.5E-22 T 25-04-2016 IPR006073 GTP binding domain GO:0005525 RJP_RS06010 b853c6a1164ef8f256a296e901b20ce0 445 Gene3D G3DSA:3.30.1360.120 2 120 3.7E-44 T 25-04-2016 IPR027266 GTP-binding protein TrmE/Glycine cleavage system T protein, domain 1 GO:0005515 RJP_RS06705 db5b5e1ea665bbea168f88b7f82347c5 664 SUPERFAMILY SSF109604 330 475 2.12E-11 T 25-04-2016 RJP_RS06705 db5b5e1ea665bbea168f88b7f82347c5 664 TIGRFAM TIGR00211 glyS: glycine--tRNA ligase, beta subunit 3 663 5.6E-168 T 25-04-2016 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 RJP_RS06705 db5b5e1ea665bbea168f88b7f82347c5 664 PANTHER PTHR30075:SF2 3 664 1.1E-225 T 25-04-2016 RJP_RS06705 db5b5e1ea665bbea168f88b7f82347c5 664 Hamap MF_00255 Glycine--tRNA ligase beta subunit [glyS]. 1 664 23.672 T 25-04-2016 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 RJP_RS06705 db5b5e1ea665bbea168f88b7f82347c5 664 PANTHER PTHR30075 3 664 1.1E-225 T 25-04-2016 RJP_RS06705 db5b5e1ea665bbea168f88b7f82347c5 664 Pfam PF02092 Glycyl-tRNA synthetase beta subunit 4 531 3.7E-177 T 25-04-2016 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 RJP_RS06705 db5b5e1ea665bbea168f88b7f82347c5 664 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 379 398 1.8E-24 T 25-04-2016 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 RJP_RS06705 db5b5e1ea665bbea168f88b7f82347c5 664 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 47 59 1.8E-24 T 25-04-2016 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 RJP_RS06705 db5b5e1ea665bbea168f88b7f82347c5 664 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 235 250 1.8E-24 T 25-04-2016 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 RJP_RS06705 db5b5e1ea665bbea168f88b7f82347c5 664 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 5 18 1.8E-24 T 25-04-2016 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 RJP_RS06705 db5b5e1ea665bbea168f88b7f82347c5 664 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 307 323 1.8E-24 T 25-04-2016 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 RJP_RS06705 db5b5e1ea665bbea168f88b7f82347c5 664 Pfam PF05746 DALR anticodon binding domain 558 654 1.4E-6 T 25-04-2016 IPR008909 DALR anticodon binding GO:0004814|GO:0005524|GO:0006420 RJP_RS06220 2209b1e7512a195f1e5e4fc0cdea19b5 301 PANTHER PTHR30238 1 301 8.7E-115 T 25-04-2016 RJP_RS06220 2209b1e7512a195f1e5e4fc0cdea19b5 301 PANTHER PTHR30238:SF0 1 301 8.7E-115 T 25-04-2016 IPR022369 Integral membrane protein TerC, riboswitch-linked GO:0016021 RJP_RS06220 2209b1e7512a195f1e5e4fc0cdea19b5 301 Pfam PF03741 Integral membrane protein TerC family 65 267 2.5E-50 T 25-04-2016 IPR005496 Integral membrane protein TerC GO:0016021 RJP_RS06220 2209b1e7512a195f1e5e4fc0cdea19b5 301 TIGRFAM TIGR03718 R_switched_Alx: integral membrane protein, TerC family 2 296 5.4E-104 T 25-04-2016 IPR022369 Integral membrane protein TerC, riboswitch-linked GO:0016021 RJP_RS03965 b6d0ba2ad6d1e4f9a050fa57f42ca741 213 PANTHER PTHR30086 5 210 7.4E-61 T 25-04-2016 IPR001123 Lysine-type exporter protein (LYSE/YGGA) GO:0006865|GO:0016020 RJP_RS03965 b6d0ba2ad6d1e4f9a050fa57f42ca741 213 PANTHER PTHR30086:SF0 5 210 7.4E-61 T 25-04-2016 RJP_RS03965 b6d0ba2ad6d1e4f9a050fa57f42ca741 213 Pfam PF01810 LysE type translocator 19 202 2.7E-22 T 25-04-2016 IPR001123 Lysine-type exporter protein (LYSE/YGGA) GO:0006865|GO:0016020 RJP_RS06980 19a4c11c9a0087a0cdad8c616cf4cbc2 145 Pfam PF03653 Uncharacterised protein family (UPF0093) 1 144 2.5E-55 T 25-04-2016 IPR005265 Uncharacterised protein family UPF0093 RJP_RS06980 19a4c11c9a0087a0cdad8c616cf4cbc2 145 TIGRFAM TIGR00701 TIGR00701: TIGR00701 family protein 4 145 1.5E-69 T 25-04-2016 IPR014351 Conserved hypothetical protein CHP00701 RJP_RS06980 19a4c11c9a0087a0cdad8c616cf4cbc2 145 PIRSF PIRSF004638 1 145 3.8E-53 T 25-04-2016 IPR005265 Uncharacterised protein family UPF0093 RJP_RS06980 19a4c11c9a0087a0cdad8c616cf4cbc2 145 PANTHER PTHR40255 3 144 1.2E-41 T 25-04-2016 RJP_RS01960 d5e0005ea48bc1fef09e0ccc0efc86fb 107 PANTHER PTHR30547 1 107 2.3E-35 T 25-04-2016 RJP_RS01960 d5e0005ea48bc1fef09e0ccc0efc86fb 107 Pfam PF06250 Protein of unknown function (DUF1016) 15 107 6.4E-28 T 25-04-2016 IPR009362 Protein of unknown function DUF1016 RJP_RS01960 d5e0005ea48bc1fef09e0ccc0efc86fb 107 PANTHER PTHR30547:SF0 1 107 2.3E-35 T 25-04-2016 RJP_RS02345 a6b6c469fc56eec6aab77fffc64ea230 101 PANTHER PTHR32039:SF7 1 101 7.1E-35 T 25-04-2016 IPR004482 Mg chelatase-related protein RJP_RS02345 a6b6c469fc56eec6aab77fffc64ea230 101 Pfam PF01078 Magnesium chelatase, subunit ChlI 1 100 1.7E-36 T 25-04-2016 IPR000523 Magnesium chelatase ChlI domain RJP_RS02345 a6b6c469fc56eec6aab77fffc64ea230 101 Gene3D G3DSA:3.40.50.300 1 100 1.6E-19 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RJP_RS02345 a6b6c469fc56eec6aab77fffc64ea230 101 PANTHER PTHR32039 1 101 7.1E-35 T 25-04-2016 RJP_RS02345 a6b6c469fc56eec6aab77fffc64ea230 101 SUPERFAMILY SSF52540 2 100 7.3E-13 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RJP_RS05960 69b67821cae7ae18b6edb53c145c56d4 164 Gene3D G3DSA:1.10.260.40 34 95 6.0E-6 T 25-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 RJP_RS05960 69b67821cae7ae18b6edb53c145c56d4 164 SUPERFAMILY SSF47413 28 95 7.19E-5 T 25-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 RJP_RS05960 69b67821cae7ae18b6edb53c145c56d4 164 SMART SM00530 35 91 0.0051 T 25-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 RJP_RS06945 8f3ea73b2eba119e7fd6913b1c08256a 68 Gene3D G3DSA:1.25.40.10 2 68 6.3E-15 T 25-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 RJP_RS06945 8f3ea73b2eba119e7fd6913b1c08256a 68 SUPERFAMILY SSF48452 2 67 1.26E-16 T 25-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 RJP_RS06945 8f3ea73b2eba119e7fd6913b1c08256a 68 Pfam PF00515 Tetratricopeptide repeat 14 43 9.1E-7 T 25-04-2016 IPR001440 Tetratricopeptide repeat 1 GO:0005515 RJP_RS06945 8f3ea73b2eba119e7fd6913b1c08256a 68 SMART SM00028 13 46 8.9E-4 T 25-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 RJP_RS04595 69dcf37413109c9cd67e9316399e61eb 286 Pfam PF13242 HAD-hyrolase-like 200 284 2.3E-19 T 25-04-2016 RJP_RS04595 69dcf37413109c9cd67e9316399e61eb 286 PANTHER PTHR19288 6 284 8.3E-43 T 25-04-2016 RJP_RS04595 69dcf37413109c9cd67e9316399e61eb 286 Pfam PF13344 Haloacid dehalogenase-like hydrolase 19 95 3.6E-11 T 25-04-2016 IPR006357 HAD-superfamily hydrolase, subfamily IIA RJP_RS04595 69dcf37413109c9cd67e9316399e61eb 286 TIGRFAM TIGR01459 HAD-SF-IIA-hyp4: HAD hydrolase, TIGR01459 family 9 248 7.1E-113 T 25-04-2016 IPR006356 HAD-superfamily hydrolase, subfamily IIA, hypothetical 3 RJP_RS04595 69dcf37413109c9cd67e9316399e61eb 286 TIGRFAM TIGR01460 HAD-SF-IIA: HAD hydrolase, family IIA 19 249 1.4E-63 T 25-04-2016 IPR006357 HAD-superfamily hydrolase, subfamily IIA RJP_RS04595 69dcf37413109c9cd67e9316399e61eb 286 PANTHER PTHR19288:SF3 6 284 8.3E-43 T 25-04-2016 RJP_RS04595 69dcf37413109c9cd67e9316399e61eb 286 Gene3D G3DSA:3.40.50.1000 6 82 2.1E-33 T 25-04-2016 IPR023214 HAD-like domain RJP_RS04595 69dcf37413109c9cd67e9316399e61eb 286 Gene3D G3DSA:3.40.50.1000 198 283 2.1E-33 T 25-04-2016 IPR023214 HAD-like domain RJP_RS04595 69dcf37413109c9cd67e9316399e61eb 286 SUPERFAMILY SSF56784 15 258 2.52E-35 T 25-04-2016 IPR023214 HAD-like domain RJP_RS05140 2839cb4724f1e02b73b24657372d784a 63 Pfam PF00327 Ribosomal protein L30p/L7e 8 57 3.6E-16 T 25-04-2016 IPR016082 Ribosomal protein L30, ferredoxin-like fold domain RJP_RS05140 2839cb4724f1e02b73b24657372d784a 63 TIGRFAM TIGR01308 rpmD_bact: ribosomal protein uL30 8 62 9.8E-25 T 25-04-2016 IPR005996 Ribosomal protein L30, bacterial-type GO:0003735|GO:0006412|GO:0015934 RJP_RS05140 2839cb4724f1e02b73b24657372d784a 63 Gene3D G3DSA:3.30.1390.20 6 62 3.5E-25 T 25-04-2016 IPR016082 Ribosomal protein L30, ferredoxin-like fold domain RJP_RS05140 2839cb4724f1e02b73b24657372d784a 63 PANTHER PTHR15892:SF2 7 62 1.7E-18 T 25-04-2016 RJP_RS05140 2839cb4724f1e02b73b24657372d784a 63 Hamap MF_01371_B 50S ribosomal protein L30 [rpmD]. 5 62 17.759 T 25-04-2016 IPR005996 Ribosomal protein L30, bacterial-type GO:0003735|GO:0006412|GO:0015934 RJP_RS05140 2839cb4724f1e02b73b24657372d784a 63 SUPERFAMILY SSF55129 6 62 2.88E-17 T 25-04-2016 IPR016082 Ribosomal protein L30, ferredoxin-like fold domain RJP_RS05140 2839cb4724f1e02b73b24657372d784a 63 PIRSF PIRSF002211 1 63 7.0E-24 T 25-04-2016 IPR005996 Ribosomal protein L30, bacterial-type GO:0003735|GO:0006412|GO:0015934 RJP_RS05140 2839cb4724f1e02b73b24657372d784a 63 PANTHER PTHR15892 7 62 1.7E-18 T 25-04-2016 RJP_RS01665 d0e9f2382d2a208c8211ee97218702de 456 SUPERFAMILY SSF52096 34 113 1.99E-76 T 25-04-2016 IPR029045 ClpP/crotonase-like domain RJP_RS01665 d0e9f2382d2a208c8211ee97218702de 456 SUPERFAMILY SSF52096 187 365 1.99E-76 T 25-04-2016 IPR029045 ClpP/crotonase-like domain RJP_RS01665 d0e9f2382d2a208c8211ee97218702de 456 Gene3D G3DSA:2.30.42.10 101 176 7.5E-22 T 25-04-2016 IPR001478 PDZ domain GO:0005515 RJP_RS01665 d0e9f2382d2a208c8211ee97218702de 456 SUPERFAMILY SSF50156 87 177 1.29E-13 T 25-04-2016 IPR001478 PDZ domain GO:0005515 RJP_RS01665 d0e9f2382d2a208c8211ee97218702de 456 Gene3D G3DSA:3.30.750.44 50 100 2.1E-8 T 25-04-2016 RJP_RS01665 d0e9f2382d2a208c8211ee97218702de 456 PANTHER PTHR32060 39 435 3.6E-111 T 25-04-2016 RJP_RS01665 d0e9f2382d2a208c8211ee97218702de 456 SMART SM00228 95 166 2.1E-9 T 25-04-2016 IPR001478 PDZ domain GO:0005515 RJP_RS01665 d0e9f2382d2a208c8211ee97218702de 456 Gene3D G3DSA:3.90.226.10 418 447 8.0E-65 T 25-04-2016 IPR029045 ClpP/crotonase-like domain RJP_RS01665 d0e9f2382d2a208c8211ee97218702de 456 Gene3D G3DSA:3.90.226.10 177 363 8.0E-65 T 25-04-2016 IPR029045 ClpP/crotonase-like domain RJP_RS01665 d0e9f2382d2a208c8211ee97218702de 456 Pfam PF03572 Peptidase family S41 193 359 8.4E-57 T 25-04-2016 IPR005151 Tail specific protease GO:0006508|GO:0008236 RJP_RS01665 d0e9f2382d2a208c8211ee97218702de 456 Pfam PF00595 PDZ domain (Also known as DHR or GLGF) 92 162 1.5E-6 T 25-04-2016 IPR001478 PDZ domain GO:0005515 RJP_RS01665 d0e9f2382d2a208c8211ee97218702de 456 SMART SM00245 168 361 1.9E-89 T 25-04-2016 IPR005151 Tail specific protease GO:0006508|GO:0008236 RJP_RS01665 d0e9f2382d2a208c8211ee97218702de 456 TIGRFAM TIGR00225 prc: C-terminal processing peptidase 49 371 2.0E-97 T 25-04-2016 IPR004447 C-terminal-processing peptidase S41A GO:0006508|GO:0008236 RJP_RS05930 86aae5e2903788de6cff27c99dde379d 372 Gene3D G3DSA:3.40.50.2300 41 146 1.8E-11 T 25-04-2016 RJP_RS05930 86aae5e2903788de6cff27c99dde379d 372 Pfam PF13458 Periplasmic binding protein 41 257 1.7E-8 T 25-04-2016 IPR028081 Leucine-binding protein domain RJP_RS05930 86aae5e2903788de6cff27c99dde379d 372 SUPERFAMILY SSF53822 41 366 5.72E-26 T 25-04-2016 IPR028082 Periplasmic binding protein-like I RJP_RS04965 3e34cf34876e398406c2fcaf29c573e2 87 SUPERFAMILY SSF109910 8 83 3.53E-22 T 25-04-2016 IPR005631 Flavinator of succinate dehydrogenase RJP_RS04965 3e34cf34876e398406c2fcaf29c573e2 87 Gene3D G3DSA:1.10.150.250 6 83 9.4E-25 T 25-04-2016 IPR005631 Flavinator of succinate dehydrogenase RJP_RS04965 3e34cf34876e398406c2fcaf29c573e2 87 PANTHER PTHR12469 13 86 1.9E-22 T 25-04-2016 RJP_RS04965 3e34cf34876e398406c2fcaf29c573e2 87 Pfam PF03937 Flavinator of succinate dehydrogenase 11 81 1.2E-20 T 25-04-2016 IPR005631 Flavinator of succinate dehydrogenase RJP_RS04965 3e34cf34876e398406c2fcaf29c573e2 87 PANTHER PTHR12469:SF2 13 86 1.9E-22 T 25-04-2016 RJP_RS03520 41eb4c1d8fba7e052aa556d391012aee 125 Gene3D G3DSA:1.10.260.40 15 98 4.0E-17 T 25-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 RJP_RS03520 41eb4c1d8fba7e052aa556d391012aee 125 SUPERFAMILY SSF47413 8 84 6.4E-19 T 25-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 RJP_RS03520 41eb4c1d8fba7e052aa556d391012aee 125 Pfam PF01381 Helix-turn-helix 19 73 5.5E-14 T 25-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 RJP_RS03520 41eb4c1d8fba7e052aa556d391012aee 125 SMART SM00530 18 73 2.9E-12 T 25-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 RJP_RS03520 41eb4c1d8fba7e052aa556d391012aee 125 PANTHER PTHR10245 9 76 4.4E-16 T 25-04-2016 RJP_RS03520 41eb4c1d8fba7e052aa556d391012aee 125 PANTHER PTHR10245:SF38 9 76 4.4E-16 T 25-04-2016 RJP_RS02795 21ee629233ea727e581bf14cd3923cec 246 TIGRFAM TIGR00466 kdsB: 3-deoxy-D-manno-octulosonate cytidylyltransferase 7 232 7.0E-54 T 25-04-2016 IPR004528 3-deoxy-D-manno-octulosonate cytidylyltransferase GO:0005737|GO:0008690 KEGG: 00540+2.7.7.38|MetaCyc: PWY-1269|UniPathway: UPA00030|UniPathway: UPA00358 RJP_RS02795 21ee629233ea727e581bf14cd3923cec 246 Hamap MF_00057 3-deoxy-manno-octulosonate cytidylyltransferase [kdsB]. 4 239 33.769 T 25-04-2016 IPR004528 3-deoxy-D-manno-octulosonate cytidylyltransferase GO:0005737|GO:0008690 KEGG: 00540+2.7.7.38|MetaCyc: PWY-1269|UniPathway: UPA00030|UniPathway: UPA00358 RJP_RS02795 21ee629233ea727e581bf14cd3923cec 246 Gene3D G3DSA:3.90.550.10 6 240 1.3E-57 T 25-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases RJP_RS02795 21ee629233ea727e581bf14cd3923cec 246 SUPERFAMILY SSF53448 6 239 2.7E-45 T 25-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases RJP_RS02795 21ee629233ea727e581bf14cd3923cec 246 PANTHER PTHR21485 6 234 3.1E-72 T 25-04-2016 RJP_RS02795 21ee629233ea727e581bf14cd3923cec 246 Pfam PF02348 Cytidylyltransferase 7 213 6.7E-56 T 25-04-2016 IPR003329 Acylneuraminate cytidylyltransferase KEGG: 00540+2.7.7.38|MetaCyc: PWY-1269|UniPathway: UPA00030|UniPathway: UPA00358 RJP_RS02795 21ee629233ea727e581bf14cd3923cec 246 PANTHER PTHR21485:SF4 6 234 3.1E-72 T 25-04-2016 IPR004528 3-deoxy-D-manno-octulosonate cytidylyltransferase GO:0005737|GO:0008690 KEGG: 00540+2.7.7.38|MetaCyc: PWY-1269|UniPathway: UPA00030|UniPathway: UPA00358 RJP_RS05860 c74a31c0849e0805538ef3cbfbda6a60 167 SUPERFAMILY SSF55486 23 167 1.25E-39 T 25-04-2016 RJP_RS05860 c74a31c0849e0805538ef3cbfbda6a60 167 ProSitePatterns PS01306 Uncharacterized protein family UPF0054 signature. 131 141 - T 25-04-2016 IPR020549 Endoribonuclease YbeY, conserved site RJP_RS05860 c74a31c0849e0805538ef3cbfbda6a60 167 PANTHER PTHR22881 43 167 4.3E-30 T 25-04-2016 RJP_RS05860 c74a31c0849e0805538ef3cbfbda6a60 167 Hamap MF_00009 Endoribonuclease YbeY [ybeY]. 1 165 20.775 T 25-04-2016 IPR002036 Endoribonuclease YbeY GO:0004222|GO:0006364 RJP_RS05860 c74a31c0849e0805538ef3cbfbda6a60 167 Gene3D G3DSA:3.40.390.30 4 163 5.9E-41 T 25-04-2016 IPR023091 Metalloprotease catalytic domain, predicted GO:0004222 RJP_RS05860 c74a31c0849e0805538ef3cbfbda6a60 167 TIGRFAM TIGR00043 TIGR00043: rRNA maturation RNase YbeY 45 160 4.7E-31 T 25-04-2016 IPR002036 Endoribonuclease YbeY GO:0004222|GO:0006364 RJP_RS05860 c74a31c0849e0805538ef3cbfbda6a60 167 Pfam PF02130 Uncharacterized protein family UPF0054 17 159 9.9E-34 T 25-04-2016 IPR002036 Endoribonuclease YbeY GO:0004222|GO:0006364 RJP_RS03140 1af4c6955f2a16a2748a8c89c6ddcc45 294 PANTHER PTHR12128 1 292 7.3E-113 T 25-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 RJP_RS03140 1af4c6955f2a16a2748a8c89c6ddcc45 294 TIGRFAM TIGR00674 dapA: 4-hydroxy-tetrahydrodipicolinate synthase 8 289 2.2E-109 T 25-04-2016 IPR005263 4-hydroxy-tetrahydrodipicolinate synthase, DapA GO:0008840|GO:0009089 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 RJP_RS03140 1af4c6955f2a16a2748a8c89c6ddcc45 294 Pfam PF00701 Dihydrodipicolinate synthetase family 5 288 5.7E-78 T 25-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 RJP_RS03140 1af4c6955f2a16a2748a8c89c6ddcc45 294 Gene3D G3DSA:3.20.20.70 2 292 4.3E-100 T 25-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 RJP_RS03140 1af4c6955f2a16a2748a8c89c6ddcc45 294 ProSitePatterns PS00666 Dihydrodipicolinate synthase signature 2. 135 165 - T 25-04-2016 IPR020625 Schiff base-forming aldolase, active site GO:0008152|GO:0016829 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 RJP_RS03140 1af4c6955f2a16a2748a8c89c6ddcc45 294 SUPERFAMILY SSF51569 4 290 2.09E-89 T 25-04-2016 RJP_RS03140 1af4c6955f2a16a2748a8c89c6ddcc45 294 ProSitePatterns PS00665 Dihydrodipicolinate synthase signature 1. 40 57 - T 25-04-2016 IPR020624 Schiff base-forming aldolase, conserved site GO:0008152|GO:0016829 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 RJP_RS03140 1af4c6955f2a16a2748a8c89c6ddcc45 294 Hamap MF_00418 4-hydroxy-tetrahydrodipicolinate synthase [dapA]. 4 289 55.471 T 25-04-2016 IPR005263 4-hydroxy-tetrahydrodipicolinate synthase, DapA GO:0008840|GO:0009089 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 RJP_RS03140 1af4c6955f2a16a2748a8c89c6ddcc45 294 PANTHER PTHR12128:SF34 1 292 7.3E-113 T 25-04-2016 RJP_RS03140 1af4c6955f2a16a2748a8c89c6ddcc45 294 PRINTS PR00146 Dihydrodipicolinate synthase signature 37 58 7.2E-22 T 25-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 RJP_RS03140 1af4c6955f2a16a2748a8c89c6ddcc45 294 PRINTS PR00146 Dihydrodipicolinate synthase signature 130 147 7.2E-22 T 25-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 RJP_RS03140 1af4c6955f2a16a2748a8c89c6ddcc45 294 PRINTS PR00146 Dihydrodipicolinate synthase signature 73 91 7.2E-22 T 25-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 RJP_RS03140 1af4c6955f2a16a2748a8c89c6ddcc45 294 PRINTS PR00146 Dihydrodipicolinate synthase signature 105 121 7.2E-22 T 25-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 RJP_RS03140 1af4c6955f2a16a2748a8c89c6ddcc45 294 PIRSF PIRSF001365 1 293 1.2E-82 T 25-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 RJP_RS03140 1af4c6955f2a16a2748a8c89c6ddcc45 294 SMART SM01130 4 291 4.4E-110 T 25-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 RJP_RS01685 0f1490d002c800bb6da407d5525de2d8 414 Pfam PF13360 PQQ-like domain 89 324 1.7E-29 T 25-04-2016 IPR002372 Pyrrolo-quinoline quinone repeat RJP_RS01685 0f1490d002c800bb6da407d5525de2d8 414 Gene3D G3DSA:2.140.10.10 204 377 3.6E-20 T 25-04-2016 IPR027295 Quinoprotein alcohol dehydrogenase-like domain RJP_RS01685 0f1490d002c800bb6da407d5525de2d8 414 Gene3D G3DSA:2.140.10.10 71 196 1.2E-17 T 25-04-2016 IPR027295 Quinoprotein alcohol dehydrogenase-like domain RJP_RS01685 0f1490d002c800bb6da407d5525de2d8 414 SUPERFAMILY SSF50998 73 373 7.96E-44 T 25-04-2016 IPR011047 Quinoprotein alcohol dehydrogenase-like superfamily RJP_RS01685 0f1490d002c800bb6da407d5525de2d8 414 SMART SM00564 259 290 6.9E-4 T 25-04-2016 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat RJP_RS01685 0f1490d002c800bb6da407d5525de2d8 414 SMART SM00564 296 328 130.0 T 25-04-2016 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat RJP_RS01685 0f1490d002c800bb6da407d5525de2d8 414 SMART SM00564 160 192 170.0 T 25-04-2016 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat RJP_RS01685 0f1490d002c800bb6da407d5525de2d8 414 SMART SM00564 206 237 6.2E-5 T 25-04-2016 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat RJP_RS01685 0f1490d002c800bb6da407d5525de2d8 414 SMART SM00564 119 151 82.0 T 25-04-2016 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat RJP_RS01685 0f1490d002c800bb6da407d5525de2d8 414 SMART SM00564 75 106 180.0 T 25-04-2016 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat RJP_RS05965 82f417e21797b000920a3a31ad96ea5d 103 TIGRFAM TIGR03775 RPE3: rickettsial palindromic element RPE3 domain 51 93 5.8E-22 T 25-04-2016 IPR022437 Rickettsia palindromic element RPE3 RJP_RS05670 56aa376dd3b850c238a2868f29e5b41a 284 SUPERFAMILY SSF51261 84 278 1.78E-45 T 25-04-2016 IPR011055 Duplicated hybrid motif RJP_RS05670 56aa376dd3b850c238a2868f29e5b41a 284 Pfam PF01551 Peptidase family M23 180 274 5.3E-31 T 25-04-2016 IPR016047 Peptidase M23 RJP_RS05670 56aa376dd3b850c238a2868f29e5b41a 284 PANTHER PTHR21666 157 278 3.8E-31 T 25-04-2016 RJP_RS05670 56aa376dd3b850c238a2868f29e5b41a 284 Gene3D G3DSA:2.70.70.10 131 278 2.2E-42 T 25-04-2016 RJP_RS00745 661712c6e4c6b09b1a4432ef4a0c6fd3 165 SUPERFAMILY SSF64438 61 147 5.04E-5 T 25-04-2016 IPR011324 Cytotoxic necrotizing factor-like, catalytic RJP_RS02885 d82d642b1b687f967cdd611a5b499959 282 PANTHER PTHR31632 1 267 8.1E-18 T 25-04-2016 IPR004923 Iron permease FTR1/Fip1/EfeU GO:0005381|GO:0006827|GO:0016020|GO:0033573 RJP_RS02885 d82d642b1b687f967cdd611a5b499959 282 Pfam PF03239 Iron permease FTR1 family 1 270 2.7E-55 T 25-04-2016 IPR004923 Iron permease FTR1/Fip1/EfeU GO:0005381|GO:0006827|GO:0016020|GO:0033573 RJP_RS00270 d6307c58921bd8cf31c5e40a9050a741 189 SUPERFAMILY SSF143456 7 189 1.57E-46 T 25-04-2016 RJP_RS00270 d6307c58921bd8cf31c5e40a9050a741 189 Gene3D G3DSA:3.30.70.1300 46 132 3.3E-17 T 25-04-2016 RJP_RS00270 d6307c58921bd8cf31c5e40a9050a741 189 Gene3D G3DSA:3.40.1740.10 133 178 1.2E-26 T 25-04-2016 RJP_RS00270 d6307c58921bd8cf31c5e40a9050a741 189 Gene3D G3DSA:3.40.1740.10 7 45 1.2E-26 T 25-04-2016 RJP_RS00270 d6307c58921bd8cf31c5e40a9050a741 189 Pfam PF02622 Uncharacterized ACR, COG1678 22 176 5.0E-37 T 25-04-2016 IPR003774 Protein of unknown function UPF0301 RJP_RS00270 d6307c58921bd8cf31c5e40a9050a741 189 PANTHER PTHR30327:SF1 3 189 4.0E-33 T 25-04-2016 RJP_RS00270 d6307c58921bd8cf31c5e40a9050a741 189 PANTHER PTHR30327 3 189 4.0E-33 T 25-04-2016 RJP_RS00270 d6307c58921bd8cf31c5e40a9050a741 189 Hamap MF_00758 UPF0301 protein YqgE [yqgE]. 7 189 31.045 T 25-04-2016 IPR003774 Protein of unknown function UPF0301 RJP_RS03600 1b81a2630e133f1fdf3a963f5ef8aa85 270 SUPERFAMILY SSF55681 6 213 5.63E-51 T 25-04-2016 RJP_RS03600 1b81a2630e133f1fdf3a963f5ef8aa85 270 Pfam PF02237 Biotin protein ligase C terminal domain 220 260 5.7E-5 T 25-04-2016 IPR003142 Biotin protein ligase, C-terminal GO:0006464 KEGG: 00780+6.3.4.15 RJP_RS03600 1b81a2630e133f1fdf3a963f5ef8aa85 270 Pfam PF03099 Biotin/lipoate A/B protein ligase family 14 154 8.2E-17 T 25-04-2016 IPR004143 Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL), catalytic domain GO:0006464 RJP_RS03600 1b81a2630e133f1fdf3a963f5ef8aa85 270 TIGRFAM TIGR00121 birA_ligase: biotin--[acetyl-CoA-carboxylase] ligase 110 247 3.1E-26 T 25-04-2016 IPR004408 Biotin--acetyl-CoA-carboxylase ligase GO:0004077|GO:0006464 RJP_RS03600 1b81a2630e133f1fdf3a963f5ef8aa85 270 Gene3D G3DSA:3.30.930.10 5 213 7.7E-61 T 25-04-2016 RJP_RS03600 1b81a2630e133f1fdf3a963f5ef8aa85 270 PANTHER PTHR12835 116 270 1.1E-50 T 25-04-2016 IPR004408 Biotin--acetyl-CoA-carboxylase ligase GO:0004077|GO:0006464 RJP_RS03600 1b81a2630e133f1fdf3a963f5ef8aa85 270 PANTHER PTHR12835 7 100 1.1E-50 T 25-04-2016 IPR004408 Biotin--acetyl-CoA-carboxylase ligase GO:0004077|GO:0006464 RJP_RS00250 66c29b16f69ec83c0220f0862f3a3c73 90 ProDom PD511875 RC0041 7 45 5.0E-13 T 25-04-2016 RJP_RS01735 66f385d31e501f89f4ac5468b0d4bbe2 188 Gene3D G3DSA:2.40.50.140 130 187 6.7E-23 T 25-04-2016 IPR012340 Nucleic acid-binding, OB-fold RJP_RS01735 66f385d31e501f89f4ac5468b0d4bbe2 188 Hamap MF_00141 Elongation factor P [efp]. 2 187 46.487 T 25-04-2016 IPR011768 Translation elongation factor P GO:0003746|GO:0005737|GO:0006414 UniPathway: UPA00345 RJP_RS01735 66f385d31e501f89f4ac5468b0d4bbe2 188 SUPERFAMILY SSF50104 3 65 9.03E-15 T 25-04-2016 IPR008991 Translation protein SH3-like domain RJP_RS01735 66f385d31e501f89f4ac5468b0d4bbe2 188 Pfam PF08207 Elongation factor P (EF-P) KOW-like domain 4 61 1.1E-20 T 25-04-2016 IPR013185 Translation elongation factor, KOW-like UniPathway: UPA00345 RJP_RS01735 66f385d31e501f89f4ac5468b0d4bbe2 188 PIRSF PIRSF005901 1 188 6.5E-67 T 25-04-2016 IPR020599 Translation elongation factor P/YeiP UniPathway: UPA00345 RJP_RS01735 66f385d31e501f89f4ac5468b0d4bbe2 188 SMART SM01185 69 123 4.0E-22 T 25-04-2016 IPR001059 Translation elongation factor P/YeiP, central GO:0003746|GO:0006414 UniPathway: UPA00345 RJP_RS01735 66f385d31e501f89f4ac5468b0d4bbe2 188 ProSitePatterns PS01275 Elongation factor P signature. 152 171 - T 25-04-2016 IPR013852 Translation elongation factor P/YeiP, conserved site UniPathway: UPA00345 RJP_RS01735 66f385d31e501f89f4ac5468b0d4bbe2 188 TIGRFAM TIGR00038 efp: translation elongation factor P 3 187 1.4E-69 T 25-04-2016 IPR011768 Translation elongation factor P GO:0003746|GO:0005737|GO:0006414 UniPathway: UPA00345 RJP_RS01735 66f385d31e501f89f4ac5468b0d4bbe2 188 Pfam PF01132 Elongation factor P (EF-P) OB domain 70 123 3.4E-19 T 25-04-2016 IPR001059 Translation elongation factor P/YeiP, central GO:0003746|GO:0006414 UniPathway: UPA00345 RJP_RS01735 66f385d31e501f89f4ac5468b0d4bbe2 188 Gene3D G3DSA:2.40.50.140 67 129 5.6E-23 T 25-04-2016 IPR012340 Nucleic acid-binding, OB-fold RJP_RS01735 66f385d31e501f89f4ac5468b0d4bbe2 188 SUPERFAMILY SSF50249 130 187 4.91E-17 T 25-04-2016 IPR012340 Nucleic acid-binding, OB-fold RJP_RS01735 66f385d31e501f89f4ac5468b0d4bbe2 188 SMART SM00841 131 186 1.0E-26 T 25-04-2016 IPR015365 Elongation factor P, C-terminal GO:0005737|GO:0043043 UniPathway: UPA00345 RJP_RS01735 66f385d31e501f89f4ac5468b0d4bbe2 188 SUPERFAMILY SSF50249 67 129 1.29E-17 T 25-04-2016 IPR012340 Nucleic acid-binding, OB-fold RJP_RS01735 66f385d31e501f89f4ac5468b0d4bbe2 188 PANTHER PTHR30053 1 188 1.7E-75 T 25-04-2016 RJP_RS01735 66f385d31e501f89f4ac5468b0d4bbe2 188 Pfam PF09285 Elongation factor P, C-terminal 131 186 8.5E-21 T 25-04-2016 IPR015365 Elongation factor P, C-terminal GO:0005737|GO:0043043 UniPathway: UPA00345 RJP_RS01735 66f385d31e501f89f4ac5468b0d4bbe2 188 Gene3D G3DSA:2.30.30.30 3 65 1.0E-20 T 25-04-2016 IPR014722 Ribosomal protein L2 domain 2 RJP_RS01885 afbf20b869dcf52ea57d1c642e44d755 184 PANTHER PTHR35089 30 180 5.5E-16 T 25-04-2016 RJP_RS01885 afbf20b869dcf52ea57d1c642e44d755 184 SMART SM00935 11 174 5.2E-30 T 25-04-2016 IPR005632 Chaperone protein Skp GO:0051082 RJP_RS01885 afbf20b869dcf52ea57d1c642e44d755 184 Pfam PF03938 Outer membrane protein (OmpH-like) 24 170 1.1E-20 T 25-04-2016 IPR005632 Chaperone protein Skp GO:0051082 RJP_RS01885 afbf20b869dcf52ea57d1c642e44d755 184 Gene3D G3DSA:3.30.910.20 33 170 5.2E-11 T 25-04-2016 RJP_RS01885 afbf20b869dcf52ea57d1c642e44d755 184 SUPERFAMILY SSF111384 33 174 8.76E-26 T 25-04-2016 IPR024930 Skp domain RJP_RS02645 7654fdd6d5478575617bcf82c5fe6b38 306 TIGRFAM TIGR02225 recomb_XerD: tyrosine recombinase XerD 6 303 2.8E-99 T 25-04-2016 IPR011932 Tyrosine recombinase XerD GO:0006310|GO:0009009 RJP_RS02645 7654fdd6d5478575617bcf82c5fe6b38 306 SUPERFAMILY SSF56349 4 298 1.62E-53 T 25-04-2016 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 RJP_RS02645 7654fdd6d5478575617bcf82c5fe6b38 306 PANTHER PTHR30349:SF5 4 306 7.2E-82 T 25-04-2016 RJP_RS02645 7654fdd6d5478575617bcf82c5fe6b38 306 Hamap MF_01808 Tyrosine recombinase XerC [xerC]. 1 305 26.369 T 25-04-2016 IPR023009 Tyrosine recombinase XerC/XerD RJP_RS02645 7654fdd6d5478575617bcf82c5fe6b38 306 Gene3D G3DSA:1.10.150.130 3 95 1.2E-23 T 25-04-2016 IPR023109 Integrase/recombinase, N-terminal RJP_RS02645 7654fdd6d5478575617bcf82c5fe6b38 306 Pfam PF00589 Phage integrase family 110 290 4.2E-38 T 25-04-2016 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 RJP_RS02645 7654fdd6d5478575617bcf82c5fe6b38 306 Hamap MF_01807 Tyrosine recombinase XerD [xerD]. 1 304 56.645 T 25-04-2016 IPR011932 Tyrosine recombinase XerD GO:0006310|GO:0009009 RJP_RS02645 7654fdd6d5478575617bcf82c5fe6b38 306 PANTHER PTHR30349 4 306 7.2E-82 T 25-04-2016 RJP_RS02645 7654fdd6d5478575617bcf82c5fe6b38 306 Pfam PF02899 Phage integrase, N-terminal SAM-like domain 4 85 3.7E-22 T 25-04-2016 IPR004107 Integrase, SAM-like, N-terminal GO:0003677|GO:0015074 RJP_RS02645 7654fdd6d5478575617bcf82c5fe6b38 306 Gene3D G3DSA:1.10.443.10 108 297 1.1E-46 T 25-04-2016 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 RJP_RS04695 870510d6a68ee4b7b44eab3b9379fc9b 95 Pfam PF00166 Chaperonin 10 Kd subunit 3 94 9.2E-33 T 25-04-2016 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 RJP_RS04695 870510d6a68ee4b7b44eab3b9379fc9b 95 PANTHER PTHR10772 1 94 2.0E-41 T 25-04-2016 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 RJP_RS04695 870510d6a68ee4b7b44eab3b9379fc9b 95 PRINTS PR00297 10kDa chaperonin signature 25 46 1.3E-30 T 25-04-2016 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 RJP_RS04695 870510d6a68ee4b7b44eab3b9379fc9b 95 PRINTS PR00297 10kDa chaperonin signature 3 18 1.3E-30 T 25-04-2016 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 RJP_RS04695 870510d6a68ee4b7b44eab3b9379fc9b 95 PRINTS PR00297 10kDa chaperonin signature 81 94 1.3E-30 T 25-04-2016 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 RJP_RS04695 870510d6a68ee4b7b44eab3b9379fc9b 95 PRINTS PR00297 10kDa chaperonin signature 60 72 1.3E-30 T 25-04-2016 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 RJP_RS04695 870510d6a68ee4b7b44eab3b9379fc9b 95 SMART SM00883 2 94 1.2E-52 T 25-04-2016 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 RJP_RS04695 870510d6a68ee4b7b44eab3b9379fc9b 95 Hamap MF_00580 10 kDa chaperonin [groS]. 2 95 25.484 T 25-04-2016 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 RJP_RS04695 870510d6a68ee4b7b44eab3b9379fc9b 95 Gene3D G3DSA:2.30.33.40 2 94 8.3E-36 T 25-04-2016 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 RJP_RS04695 870510d6a68ee4b7b44eab3b9379fc9b 95 SUPERFAMILY SSF50129 1 94 8.57E-34 T 25-04-2016 IPR011032 GroES-like RJP_RS04695 870510d6a68ee4b7b44eab3b9379fc9b 95 ProSitePatterns PS00681 Chaperonins cpn10 signature. 3 27 - T 25-04-2016 IPR018369 Chaperonin GroES, conserved site GO:0005524|GO:0006457 RJP_RS05405 1525da04fdd965b7b26545c3daaedf94 133 TIGRFAM TIGR01045 RPE1: rickettsial palindromic element RPE1 domain 5 39 7.3E-14 T 25-04-2016 IPR005728 Rickettsial palindromic element RJP_RS05405 1525da04fdd965b7b26545c3daaedf94 133 TIGRFAM TIGR03776 RPE5: rickettsial palindromic element RPE5 domain 39 77 9.4E-12 T 25-04-2016 IPR022438 Rickettsia palindromic element RPE5 RJP_RS05405 1525da04fdd965b7b26545c3daaedf94 133 Gene3D G3DSA:3.90.550.10 93 132 1.2E-12 T 25-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases RJP_RS05405 1525da04fdd965b7b26545c3daaedf94 133 Pfam PF00483 Nucleotidyl transferase 94 132 5.8E-9 T 25-04-2016 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 Reactome: REACT_17015 RJP_RS05405 1525da04fdd965b7b26545c3daaedf94 133 SUPERFAMILY SSF53448 93 132 4.56E-11 T 25-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases RJP_RS02475 b41dfc0f215ad86c648377d26a9adab1 136 Gene3D G3DSA:3.40.50.150 28 121 5.5E-22 T 25-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RJP_RS02475 b41dfc0f215ad86c648377d26a9adab1 136 PANTHER PTHR10108 25 105 4.5E-14 T 25-04-2016 RJP_RS02475 b41dfc0f215ad86c648377d26a9adab1 136 Pfam PF13649 Methyltransferase domain 31 105 6.0E-14 T 25-04-2016 RJP_RS02475 b41dfc0f215ad86c648377d26a9adab1 136 SUPERFAMILY SSF53335 23 118 3.56E-21 T 25-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RJP_RS02475 b41dfc0f215ad86c648377d26a9adab1 136 PANTHER PTHR10108:SF358 25 105 4.5E-14 T 25-04-2016 RJP_RS04925 7a3d3d1f26aa2bcaafc12a18b22d440b 490 Pfam PF01734 Patatin-like phospholipase 14 209 2.8E-18 T 25-04-2016 IPR002641 Patatin/Phospholipase A2-related GO:0006629 RJP_RS04925 7a3d3d1f26aa2bcaafc12a18b22d440b 490 Gene3D G3DSA:3.40.1090.10 15 334 4.3E-59 T 25-04-2016 RJP_RS04925 7a3d3d1f26aa2bcaafc12a18b22d440b 490 PANTHER PTHR32241 14 208 2.4E-25 T 25-04-2016 RJP_RS04925 7a3d3d1f26aa2bcaafc12a18b22d440b 490 PANTHER PTHR32241:SF3 14 208 2.4E-25 T 25-04-2016 RJP_RS04925 7a3d3d1f26aa2bcaafc12a18b22d440b 490 SUPERFAMILY SSF52151 6 338 1.96E-38 T 25-04-2016 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase GO:0008152 RJP_RS02675 abcc64ef7f494df9858f99779d3a509f 305 Pfam PF04392 ABC transporter substrate binding protein 29 298 8.0E-86 T 25-04-2016 IPR007487 ABC transporter, substrate-binding protein RJP_RS02675 abcc64ef7f494df9858f99779d3a509f 305 Gene3D G3DSA:3.40.50.2300 27 133 3.1E-16 T 25-04-2016 RJP_RS02675 abcc64ef7f494df9858f99779d3a509f 305 SUPERFAMILY SSF53822 28 125 8.25E-12 T 25-04-2016 IPR028082 Periplasmic binding protein-like I RJP_RS02675 abcc64ef7f494df9858f99779d3a509f 305 PANTHER PTHR35271 1 304 2.7E-17 T 25-04-2016 RJP_RS02675 abcc64ef7f494df9858f99779d3a509f 305 Gene3D G3DSA:3.40.50.2300 134 267 2.9E-27 T 25-04-2016 RJP_RS01045 05d8bc964636c63c2eb988a8006d33d0 241 SMART SM00062 24 240 1.2E-58 T 25-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF RJP_RS01045 05d8bc964636c63c2eb988a8006d33d0 241 SMART SM00079 24 241 1.9E-4 T 25-04-2016 IPR001320 Ionotropic glutamate receptor GO:0004970|GO:0016020 RJP_RS01045 05d8bc964636c63c2eb988a8006d33d0 241 PANTHER PTHR18966:SF191 22 241 2.2E-36 T 25-04-2016 RJP_RS01045 05d8bc964636c63c2eb988a8006d33d0 241 PANTHER PTHR18966 22 241 2.2E-36 T 25-04-2016 RJP_RS01045 05d8bc964636c63c2eb988a8006d33d0 241 Gene3D G3DSA:3.40.190.10 99 193 2.3E-11 T 25-04-2016 RJP_RS01045 05d8bc964636c63c2eb988a8006d33d0 241 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 25 241 2.2E-50 T 25-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF RJP_RS01045 05d8bc964636c63c2eb988a8006d33d0 241 Gene3D G3DSA:3.40.190.10 21 98 1.0E-37 T 25-04-2016 RJP_RS01045 05d8bc964636c63c2eb988a8006d33d0 241 Gene3D G3DSA:3.40.190.10 198 241 1.0E-37 T 25-04-2016 RJP_RS01045 05d8bc964636c63c2eb988a8006d33d0 241 SUPERFAMILY SSF53850 22 240 6.77E-55 T 25-04-2016 RJP_RS01555 21c9c65918ae784861b69680e298ef2f 339 PANTHER PTHR30365:SF4 3 332 5.7E-141 T 25-04-2016 RJP_RS01555 21c9c65918ae784861b69680e298ef2f 339 TIGRFAM TIGR00203 cydB: cytochrome d ubiquinol oxidase, subunit II 10 217 2.9E-41 T 25-04-2016 IPR003317 Cytochrome ubiquinol oxidase subunit 2 GO:0016020|GO:0055114 RJP_RS01555 21c9c65918ae784861b69680e298ef2f 339 PIRSF PIRSF000267 6 338 5.2E-88 T 25-04-2016 IPR003317 Cytochrome ubiquinol oxidase subunit 2 GO:0016020|GO:0055114 RJP_RS01555 21c9c65918ae784861b69680e298ef2f 339 PANTHER PTHR30365 3 332 5.7E-141 T 25-04-2016 RJP_RS01555 21c9c65918ae784861b69680e298ef2f 339 Pfam PF02322 Cytochrome bd terminal oxidase subunit II 10 329 8.7E-94 T 25-04-2016 IPR003317 Cytochrome ubiquinol oxidase subunit 2 GO:0016020|GO:0055114 RJP_RS01055 9c06e752ad03c307b25967c2cac6c331 493 PANTHER PTHR11895:SF7 1 490 8.2E-207 T 25-04-2016 RJP_RS01055 9c06e752ad03c307b25967c2cac6c331 493 PANTHER PTHR11895 1 490 8.2E-207 T 25-04-2016 IPR000120 Amidase GO:0016884 KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 RJP_RS01055 9c06e752ad03c307b25967c2cac6c331 493 Gene3D G3DSA:3.90.1300.10 2 484 4.8E-163 T 25-04-2016 IPR023631 Amidase signature domain KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 RJP_RS01055 9c06e752ad03c307b25967c2cac6c331 493 ProSitePatterns PS00571 Amidases signature. 156 187 - T 25-04-2016 IPR020556 Amidase, conserved site KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 RJP_RS01055 9c06e752ad03c307b25967c2cac6c331 493 Hamap MF_00120 Glutamyl-tRNA(Gln) amidotransferase subunit A [gatA]. 12 484 89.261 T 25-04-2016 IPR004412 Glutamyl-tRNA(Gln) amidotransferase A subunit GO:0006412 KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 RJP_RS01055 9c06e752ad03c307b25967c2cac6c331 493 Pfam PF01425 Amidase 25 473 8.8E-141 T 25-04-2016 IPR023631 Amidase signature domain KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 RJP_RS01055 9c06e752ad03c307b25967c2cac6c331 493 TIGRFAM TIGR00132 gatA: aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, A subunit 16 482 1.2E-166 T 25-04-2016 IPR004412 Glutamyl-tRNA(Gln) amidotransferase A subunit GO:0006412 KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 RJP_RS01055 9c06e752ad03c307b25967c2cac6c331 493 SUPERFAMILY SSF75304 1 487 4.58E-143 T 25-04-2016 IPR023631 Amidase signature domain KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 RJP_RS04985 5824417f29088f68da45a9ba2c52ec8d 361 Pfam PF00953 Glycosyl transferase family 4 100 284 5.3E-36 T 25-04-2016 IPR000715 Glycosyl transferase, family 4 GO:0008963|GO:0016021 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 RJP_RS04985 5824417f29088f68da45a9ba2c52ec8d 361 TIGRFAM TIGR00445 mraY: phospho-N-acetylmuramoyl-pentapeptide-transferase 38 361 1.3E-126 T 25-04-2016 IPR003524 Phospho-N-acetylmuramoyl-pentapeptide transferase GO:0008963|GO:0016020 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 RJP_RS04985 5824417f29088f68da45a9ba2c52ec8d 361 PANTHER PTHR22926:SF5 2 361 1.2E-157 T 25-04-2016 RJP_RS04985 5824417f29088f68da45a9ba2c52ec8d 361 ProSitePatterns PS01348 MraY family signature 2. 189 200 - T 25-04-2016 IPR018480 Phospho-N-acetylmuramoyl-pentapeptide transferase, conserved site KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 RJP_RS04985 5824417f29088f68da45a9ba2c52ec8d 361 PANTHER PTHR22926 2 361 1.2E-157 T 25-04-2016 IPR000715 Glycosyl transferase, family 4 GO:0008963|GO:0016021 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 RJP_RS04985 5824417f29088f68da45a9ba2c52ec8d 361 Hamap MF_00038 Phospho-N-acetylmuramoyl-pentapeptide-transferase [mraY]. 25 359 25.639 T 25-04-2016 IPR003524 Phospho-N-acetylmuramoyl-pentapeptide transferase GO:0008963|GO:0016020 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 RJP_RS04985 5824417f29088f68da45a9ba2c52ec8d 361 ProSitePatterns PS01347 MraY family signature 1. 69 81 - T 25-04-2016 IPR018480 Phospho-N-acetylmuramoyl-pentapeptide transferase, conserved site KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 RJP_RS06605 09eddb94c4bc8922d9cfa950abbd7608 276 SUPERFAMILY SSF53474 47 263 4.46E-14 T 25-04-2016 IPR029058 Alpha/Beta hydrolase fold RJP_RS06605 09eddb94c4bc8922d9cfa950abbd7608 276 Gene3D G3DSA:3.40.50.1820 136 261 6.9E-12 T 25-04-2016 IPR029058 Alpha/Beta hydrolase fold RJP_RS00545 95d53902a920769a0c8d4f020a3b7bdd 110 Pfam PF01521 Iron-sulphur cluster biosynthesis 2 106 2.0E-17 T 25-04-2016 IPR000361 FeS cluster biogenesis RJP_RS00545 95d53902a920769a0c8d4f020a3b7bdd 110 PANTHER PTHR10072 3 110 3.0E-34 T 25-04-2016 RJP_RS00545 95d53902a920769a0c8d4f020a3b7bdd 110 ProSitePatterns PS01152 Hypothetical hesB/yadR/yfhF family signature. 91 108 - T 25-04-2016 IPR017870 FeS cluster insertion, C-terminal, conserved site RJP_RS00545 95d53902a920769a0c8d4f020a3b7bdd 110 TIGRFAM TIGR00049 TIGR00049: iron-sulfur cluster assembly accessory protein 3 110 4.0E-34 T 25-04-2016 IPR016092 FeS cluster insertion protein GO:0005198|GO:0016226|GO:0051536 RJP_RS00545 95d53902a920769a0c8d4f020a3b7bdd 110 SUPERFAMILY SSF89360 2 99 1.44E-25 T 25-04-2016 IPR000361 FeS cluster biogenesis RJP_RS00545 95d53902a920769a0c8d4f020a3b7bdd 110 Gene3D G3DSA:2.60.300.12 2 96 1.0E-25 T 25-04-2016 IPR000361 FeS cluster biogenesis RJP_RS05595 17473098173636e89d02b0ff430c6364 424 SMART SM01091 337 415 5.9E-22 T 25-04-2016 IPR005170 Transporter-associated domain RJP_RS05595 17473098173636e89d02b0ff430c6364 424 PANTHER PTHR22777 4 414 6.8E-120 T 25-04-2016 RJP_RS05595 17473098173636e89d02b0ff430c6364 424 Gene3D G3DSA:3.30.465.10 330 415 4.3E-22 T 25-04-2016 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 GO:0050660 RJP_RS05595 17473098173636e89d02b0ff430c6364 424 Pfam PF01595 Domain of unknown function DUF21 7 180 1.8E-36 T 25-04-2016 IPR002550 Domain of unknown function DUF21 RJP_RS05595 17473098173636e89d02b0ff430c6364 424 SMART SM00116 208 257 3.2 T 25-04-2016 IPR000644 CBS domain RJP_RS05595 17473098173636e89d02b0ff430c6364 424 SMART SM00116 274 322 2.5 T 25-04-2016 IPR000644 CBS domain RJP_RS05595 17473098173636e89d02b0ff430c6364 424 Gene3D G3DSA:3.10.580.10 186 329 1.2E-21 T 25-04-2016 RJP_RS05595 17473098173636e89d02b0ff430c6364 424 SUPERFAMILY SSF56176 335 419 1.74E-18 T 25-04-2016 IPR016166 FAD-binding, type 2 GO:0003824|GO:0016614|GO:0050660|GO:0055114 RJP_RS05595 17473098173636e89d02b0ff430c6364 424 Pfam PF00571 CBS domain 199 257 5.8E-5 T 25-04-2016 IPR000644 CBS domain RJP_RS05595 17473098173636e89d02b0ff430c6364 424 Pfam PF00571 CBS domain 273 322 2.2E-6 T 25-04-2016 IPR000644 CBS domain RJP_RS05595 17473098173636e89d02b0ff430c6364 424 SUPERFAMILY SSF54631 195 338 1.48E-33 T 25-04-2016 RJP_RS05595 17473098173636e89d02b0ff430c6364 424 Pfam PF03471 Transporter associated domain 339 414 4.6E-18 T 25-04-2016 IPR005170 Transporter-associated domain RJP_RS05135 464e262e8cb0a1d896a616f7b760a136 153 Gene3D G3DSA:3.100.10.10 32 152 1.9E-17 T 25-04-2016 RJP_RS05135 464e262e8cb0a1d896a616f7b760a136 153 PANTHER PTHR12934 1 151 9.5E-47 T 25-04-2016 IPR005749 Ribosomal protein L15, bacterial-type GO:0003735|GO:0006412|GO:0015934 RJP_RS05135 464e262e8cb0a1d896a616f7b760a136 153 Hamap MF_01341 50S ribosomal protein L15 [rplO]. 3 153 17.769 T 25-04-2016 IPR030878 Ribosomal protein L15 GO:0003735|GO:0006412|GO:0015934 RJP_RS05135 464e262e8cb0a1d896a616f7b760a136 153 SUPERFAMILY SSF52080 4 152 4.06E-34 T 25-04-2016 IPR021131 Ribosomal protein L18e/L15P RJP_RS05135 464e262e8cb0a1d896a616f7b760a136 153 Pfam PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A 27 152 5.2E-28 T 25-04-2016 IPR021131 Ribosomal protein L18e/L15P RJP_RS05135 464e262e8cb0a1d896a616f7b760a136 153 TIGRFAM TIGR01071 rplO_bact: ribosomal protein uL15 2 152 2.7E-48 T 25-04-2016 IPR005749 Ribosomal protein L15, bacterial-type GO:0003735|GO:0006412|GO:0015934 RJP_RS05755 d8b11612b0247a9eda2fe901aa955d81 823 Gene3D G3DSA:1.10.486.10 571 693 1.2E-8 T 25-04-2016 RJP_RS05755 d8b11612b0247a9eda2fe901aa955d81 823 PANTHER PTHR11070 774 798 1.3E-83 T 25-04-2016 IPR000212 DNA helicase, UvrD/REP type GO:0003677|GO:0004003|GO:0005524 RJP_RS05755 d8b11612b0247a9eda2fe901aa955d81 823 PANTHER PTHR11070 105 204 1.3E-83 T 25-04-2016 IPR000212 DNA helicase, UvrD/REP type GO:0003677|GO:0004003|GO:0005524 RJP_RS05755 d8b11612b0247a9eda2fe901aa955d81 823 PANTHER PTHR11070 265 477 1.3E-83 T 25-04-2016 IPR000212 DNA helicase, UvrD/REP type GO:0003677|GO:0004003|GO:0005524 RJP_RS05755 d8b11612b0247a9eda2fe901aa955d81 823 PANTHER PTHR11070 15 75 1.3E-83 T 25-04-2016 IPR000212 DNA helicase, UvrD/REP type GO:0003677|GO:0004003|GO:0005524 RJP_RS05755 d8b11612b0247a9eda2fe901aa955d81 823 PANTHER PTHR11070 497 749 1.3E-83 T 25-04-2016 IPR000212 DNA helicase, UvrD/REP type GO:0003677|GO:0004003|GO:0005524 RJP_RS05755 d8b11612b0247a9eda2fe901aa955d81 823 Gene3D G3DSA:3.40.50.300 702 816 5.5E-37 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RJP_RS05755 d8b11612b0247a9eda2fe901aa955d81 823 Gene3D G3DSA:3.40.50.300 427 559 5.5E-37 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RJP_RS05755 d8b11612b0247a9eda2fe901aa955d81 823 Pfam PF00580 UvrD/REP helicase N-terminal domain 3 407 9.2E-70 T 25-04-2016 IPR014016 UvrD-like Helicase, ATP-binding domain GO:0005524 RJP_RS05755 d8b11612b0247a9eda2fe901aa955d81 823 SUPERFAMILY SSF52540 11 67 1.79E-104 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RJP_RS05755 d8b11612b0247a9eda2fe901aa955d81 823 SUPERFAMILY SSF52540 775 801 1.79E-104 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RJP_RS05755 d8b11612b0247a9eda2fe901aa955d81 823 SUPERFAMILY SSF52540 106 159 1.79E-104 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RJP_RS05755 d8b11612b0247a9eda2fe901aa955d81 823 SUPERFAMILY SSF52540 207 235 1.79E-104 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RJP_RS05755 d8b11612b0247a9eda2fe901aa955d81 823 SUPERFAMILY SSF52540 290 748 1.79E-104 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RJP_RS05755 d8b11612b0247a9eda2fe901aa955d81 823 Gene3D G3DSA:3.40.50.300 8 63 1.4E-64 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RJP_RS05755 d8b11612b0247a9eda2fe901aa955d81 823 Gene3D G3DSA:3.40.50.300 114 176 1.4E-64 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RJP_RS05755 d8b11612b0247a9eda2fe901aa955d81 823 Gene3D G3DSA:3.40.50.300 300 409 1.4E-64 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RJP_RS05755 d8b11612b0247a9eda2fe901aa955d81 823 Pfam PF13361 UvrD-like helicase C-terminal domain 422 796 7.0E-24 T 25-04-2016 IPR014017 UvrD-like DNA helicase, C-terminal GO:0005524|GO:0016787 RJP_RS05230 1b224ec3c9898abae66423ee558ba319 215 PANTHER PTHR11229 1 209 1.3E-106 T 25-04-2016 IPR019927 Ribosomal protein L3, bacterial/organelle-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 RJP_RS05230 1b224ec3c9898abae66423ee558ba319 215 TIGRFAM TIGR03625 L3_bact: 50S ribosomal protein uL3 4 205 1.2E-81 T 25-04-2016 IPR019927 Ribosomal protein L3, bacterial/organelle-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 RJP_RS05230 1b224ec3c9898abae66423ee558ba319 215 Gene3D G3DSA:4.10.960.10 78 158 3.0E-28 T 25-04-2016 RJP_RS05230 1b224ec3c9898abae66423ee558ba319 215 Gene3D G3DSA:2.40.30.10 3 41 7.2E-10 T 25-04-2016 RJP_RS05230 1b224ec3c9898abae66423ee558ba319 215 Gene3D G3DSA:2.40.30.10 159 210 7.2E-10 T 25-04-2016 RJP_RS05230 1b224ec3c9898abae66423ee558ba319 215 Hamap MF_01325_B 50S ribosomal protein L3 [rplC]. 2 208 34.32 T 25-04-2016 IPR019927 Ribosomal protein L3, bacterial/organelle-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 RJP_RS05230 1b224ec3c9898abae66423ee558ba319 215 ProSitePatterns PS00474 Ribosomal protein L3 signature. 102 125 - T 25-04-2016 IPR019926 Ribosomal protein L3, conserved site RJP_RS05230 1b224ec3c9898abae66423ee558ba319 215 SUPERFAMILY SSF50447 1 210 7.59E-77 T 25-04-2016 IPR009000 Translation protein, beta-barrel domain RJP_RS05230 1b224ec3c9898abae66423ee558ba319 215 Pfam PF00297 Ribosomal protein L3 80 183 1.2E-16 T 25-04-2016 IPR000597 Ribosomal protein L3 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RJP_RS03350 2310fa9ea623e34c2ab6cdbc986b376f 51 PANTHER PTHR13061 1 50 6.9E-14 T 25-04-2016 RJP_RS03350 2310fa9ea623e34c2ab6cdbc986b376f 51 Gene3D G3DSA:2.160.10.10 5 50 8.5E-10 T 25-04-2016 RJP_RS03350 2310fa9ea623e34c2ab6cdbc986b376f 51 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 12 45 3.5E-5 T 25-04-2016 IPR001451 Hexapeptide repeat RJP_RS03350 2310fa9ea623e34c2ab6cdbc986b376f 51 SUPERFAMILY SSF51161 3 48 1.94E-9 T 25-04-2016 IPR011004 Trimeric LpxA-like RJP_RS05070 70490911cb377f50ffe1fdc7cff4e06b 142 TIGRFAM TIGR00739 yajC: preprotein translocase, YajC subunit 34 117 3.7E-32 T 25-04-2016 IPR003849 Preprotein translocase YajC RJP_RS05070 70490911cb377f50ffe1fdc7cff4e06b 142 PANTHER PTHR33909:SF1 13 141 1.4E-26 T 25-04-2016 RJP_RS05070 70490911cb377f50ffe1fdc7cff4e06b 142 PANTHER PTHR33909 13 141 1.4E-26 T 25-04-2016 RJP_RS05070 70490911cb377f50ffe1fdc7cff4e06b 142 SMART SM01323 33 117 6.1E-37 T 25-04-2016 IPR003849 Preprotein translocase YajC RJP_RS05070 70490911cb377f50ffe1fdc7cff4e06b 142 Pfam PF02699 Preprotein translocase subunit 37 113 7.3E-27 T 25-04-2016 IPR003849 Preprotein translocase YajC RJP_RS05070 70490911cb377f50ffe1fdc7cff4e06b 142 PRINTS PR01853 Bacterial YajC preprotein translocase signature 73 91 1.8E-16 T 25-04-2016 IPR003849 Preprotein translocase YajC RJP_RS05070 70490911cb377f50ffe1fdc7cff4e06b 142 PRINTS PR01853 Bacterial YajC preprotein translocase signature 35 55 1.8E-16 T 25-04-2016 IPR003849 Preprotein translocase YajC RJP_RS00320 9bac314788b4ac0618a46bb03818c6ab 83 SUPERFAMILY SSF51735 4 82 2.18E-14 T 25-04-2016 IPR016040 NAD(P)-binding domain RJP_RS00320 9bac314788b4ac0618a46bb03818c6ab 83 Pfam PF00106 short chain dehydrogenase 4 82 9.9E-12 T 25-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RJP_RS00320 9bac314788b4ac0618a46bb03818c6ab 83 Gene3D G3DSA:3.40.50.720 4 82 5.0E-16 T 25-04-2016 IPR016040 NAD(P)-binding domain RJP_RS00320 9bac314788b4ac0618a46bb03818c6ab 83 PANTHER PTHR24322 7 82 2.3E-12 T 25-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RJP_RS01415 19c551343ed1cfd791314b418a2fcc6e 193 Gene3D G3DSA:3.30.420.10 16 154 2.3E-43 T 25-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 RJP_RS01415 19c551343ed1cfd791314b418a2fcc6e 193 PANTHER PTHR10954 16 191 5.4E-65 T 25-04-2016 IPR001352 Ribonuclease HII/HIII GO:0003723|GO:0004523 RJP_RS01415 19c551343ed1cfd791314b418a2fcc6e 193 SUPERFAMILY SSF53098 11 191 5.01E-64 T 25-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 RJP_RS01415 19c551343ed1cfd791314b418a2fcc6e 193 Hamap MF_00052_B Ribonuclease HII [rnhB]. 16 193 33.719 T 25-04-2016 IPR022898 Ribonuclease HII GO:0004523 RJP_RS01415 19c551343ed1cfd791314b418a2fcc6e 193 Pfam PF01351 Ribonuclease HII 18 192 1.1E-37 T 25-04-2016 IPR024567 Ribonuclease HII/HIII domain RJP_RS00105 0e1df21016ebda44ee81923e4bde29aa 317 Pfam PF01297 Zinc-uptake complex component A periplasmic 71 310 1.5E-30 T 25-04-2016 IPR006127 Periplasmic solute binding protein, ZnuA-like GO:0030001|GO:0046872 RJP_RS00105 0e1df21016ebda44ee81923e4bde29aa 317 PANTHER PTHR30477:SF1 50 289 7.3E-22 T 25-04-2016 RJP_RS00105 0e1df21016ebda44ee81923e4bde29aa 317 PANTHER PTHR30477 50 289 7.3E-22 T 25-04-2016 RJP_RS00105 0e1df21016ebda44ee81923e4bde29aa 317 SUPERFAMILY SSF53807 61 316 1.13E-46 T 25-04-2016 RJP_RS00105 0e1df21016ebda44ee81923e4bde29aa 317 Gene3D G3DSA:3.40.50.1980 53 196 6.3E-26 T 25-04-2016 RJP_RS03475 894ff1ac438595259fc1b0ef1d0f44d6 240 SMART SM00382 28 215 1.1E-8 T 25-04-2016 IPR003593 AAA+ ATPase domain RJP_RS03475 894ff1ac438595259fc1b0ef1d0f44d6 240 Pfam PF00005 ABC transporter 19 164 1.2E-31 T 25-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 RJP_RS03475 894ff1ac438595259fc1b0ef1d0f44d6 240 PANTHER PTHR24220 5 237 8.2E-122 T 25-04-2016 RJP_RS03475 894ff1ac438595259fc1b0ef1d0f44d6 240 ProSitePatterns PS00211 ABC transporters family signature. 137 151 - T 25-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 RJP_RS03475 894ff1ac438595259fc1b0ef1d0f44d6 240 PANTHER PTHR24220:SF497 5 237 8.2E-122 T 25-04-2016 RJP_RS03475 894ff1ac438595259fc1b0ef1d0f44d6 240 Gene3D G3DSA:3.40.50.300 3 233 1.6E-63 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RJP_RS03475 894ff1ac438595259fc1b0ef1d0f44d6 240 SUPERFAMILY SSF52540 4 236 6.98E-61 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RJP_RS03475 894ff1ac438595259fc1b0ef1d0f44d6 240 TIGRFAM TIGR04406 LPS_export_lptB: LPS export ABC transporter ATP-binding protein 4 239 2.3E-113 T 25-04-2016 IPR030921 LPS export ABC transporter, ATP-binding protein LptB GO:0043190|GO:0055085 RJP_RS05305 fb5952eaebead0f09b7302329128c749 410 Pfam PF00271 Helicase conserved C-terminal domain 223 329 2.7E-29 T 25-04-2016 IPR001650 Helicase, C-terminal RJP_RS05305 fb5952eaebead0f09b7302329128c749 410 Gene3D G3DSA:3.40.50.300 2 202 1.6E-74 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RJP_RS05305 fb5952eaebead0f09b7302329128c749 410 PANTHER PTHR24031:SF261 2 355 8.2E-164 T 25-04-2016 RJP_RS05305 fb5952eaebead0f09b7302329128c749 410 Gene3D G3DSA:3.40.50.300 203 359 5.7E-53 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RJP_RS05305 fb5952eaebead0f09b7302329128c749 410 PANTHER PTHR24031 2 355 8.2E-164 T 25-04-2016 RJP_RS05305 fb5952eaebead0f09b7302329128c749 410 SMART SM00487 18 213 1.5E-56 T 25-04-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain RJP_RS05305 fb5952eaebead0f09b7302329128c749 410 SUPERFAMILY SSF52540 65 349 5.5E-71 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RJP_RS05305 fb5952eaebead0f09b7302329128c749 410 SMART SM00490 248 329 1.5E-34 T 25-04-2016 IPR001650 Helicase, C-terminal RJP_RS05305 fb5952eaebead0f09b7302329128c749 410 Pfam PF00270 DEAD/DEAH box helicase 23 183 9.0E-46 T 25-04-2016 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 RJP_RS05415 30c68bcb260ee9d530de8e80e6772d9c 73 Gene3D G3DSA:3.90.550.10 3 61 3.5E-7 T 25-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases RJP_RS05415 30c68bcb260ee9d530de8e80e6772d9c 73 SUPERFAMILY SSF53448 17 72 1.63E-6 T 25-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases RJP_RS02895 0c691f3be674265baf2befde3b6ed9dc 331 Pfam PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase 128 188 1.5E-6 T 25-04-2016 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain GO:0006457 RJP_RS02895 0c691f3be674265baf2befde3b6ed9dc 331 SUPERFAMILY SSF54534 113 195 1.1E-10 T 25-04-2016 RJP_RS02895 0c691f3be674265baf2befde3b6ed9dc 331 Gene3D G3DSA:3.10.50.40 111 187 2.7E-7 T 25-04-2016 RJP_RS03190 bdb6b98b59807c2b1ce3b95d7920d5f7 211 ProDom PD111165 RP434 1 211 2.0E-116 T 25-04-2016 RJP_RS03190 bdb6b98b59807c2b1ce3b95d7920d5f7 211 SMART SM00978 84 210 6.6E-11 T 25-04-2016 IPR007379 Tim44-like domain RJP_RS03190 bdb6b98b59807c2b1ce3b95d7920d5f7 211 SUPERFAMILY SSF54427 86 209 2.32E-11 T 25-04-2016 IPR032710 NTF2-like domain RJP_RS02295 cbc6b707c4643dbadafdd6e48926f841 235 SUPERFAMILY SSF109604 20 206 1.78E-46 T 25-04-2016 RJP_RS02295 cbc6b707c4643dbadafdd6e48926f841 235 PANTHER PTHR21262:SF0 16 181 3.6E-31 T 25-04-2016 RJP_RS02295 cbc6b707c4643dbadafdd6e48926f841 235 Pfam PF13328 HD domain 45 184 3.8E-18 T 25-04-2016 IPR003607 HD/PDEase domain RJP_RS02295 cbc6b707c4643dbadafdd6e48926f841 235 PANTHER PTHR21262 16 181 3.6E-31 T 25-04-2016 RJP_RS01615 c18cfad8b84cd1a1fcd2787d192fa82f 149 Pfam PF00005 ABC transporter 9 82 5.5E-13 T 25-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 RJP_RS01615 c18cfad8b84cd1a1fcd2787d192fa82f 149 PANTHER PTHR24221 1 140 6.3E-79 T 25-04-2016 RJP_RS01615 c18cfad8b84cd1a1fcd2787d192fa82f 149 ProSitePatterns PS00211 ABC transporters family signature. 54 68 - T 25-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 RJP_RS01615 c18cfad8b84cd1a1fcd2787d192fa82f 149 Gene3D G3DSA:3.40.50.300 2 144 1.5E-47 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RJP_RS01615 c18cfad8b84cd1a1fcd2787d192fa82f 149 SUPERFAMILY SSF52540 2 143 1.31E-50 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RJP_RS02330 59fceca137da8764ce3e31ecefcea42c 182 Hamap MF_00248 ATP-dependent protease subunit HslV [hslV]. 9 181 39.58 T 25-04-2016 IPR022281 ATP-dependent protease, HslV subunit GO:0004298|GO:0006508|GO:0009376 RJP_RS02330 59fceca137da8764ce3e31ecefcea42c 182 TIGRFAM TIGR03692 ATP_dep_HslV: ATP-dependent protease HslVU, peptidase subunit 10 180 1.9E-77 T 25-04-2016 IPR022281 ATP-dependent protease, HslV subunit GO:0004298|GO:0006508|GO:0009376 RJP_RS02330 59fceca137da8764ce3e31ecefcea42c 182 PIRSF PIRSF039093 3 182 7.0E-78 T 25-04-2016 IPR022281 ATP-dependent protease, HslV subunit GO:0004298|GO:0006508|GO:0009376 RJP_RS02330 59fceca137da8764ce3e31ecefcea42c 182 SUPERFAMILY SSF56235 7 180 1.83E-56 T 25-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal RJP_RS02330 59fceca137da8764ce3e31ecefcea42c 182 PANTHER PTHR32194 2 179 1.7E-99 T 25-04-2016 RJP_RS02330 59fceca137da8764ce3e31ecefcea42c 182 Pfam PF00227 Proteasome subunit 8 179 1.5E-26 T 25-04-2016 IPR001353 Proteasome, subunit alpha/beta GO:0004298|GO:0005839|GO:0051603 Reactome: REACT_11045|Reactome: REACT_13|Reactome: REACT_13635|Reactome: REACT_152|Reactome: REACT_1538|Reactome: REACT_383|Reactome: REACT_578|Reactome: REACT_6185|Reactome: REACT_6850 RJP_RS02330 59fceca137da8764ce3e31ecefcea42c 182 Gene3D G3DSA:3.60.20.10 10 181 2.5E-75 T 25-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal RJP_RS00235 da348d7833f485c2f716a9cd2cb962f2 136 SUPERFAMILY SSF51717 90 134 1.0E-4 T 25-04-2016 IPR011005 Dihydropteroate synthase-like GO:0044237 RJP_RS00235 da348d7833f485c2f716a9cd2cb962f2 136 Gene3D G3DSA:3.20.20.20 99 135 2.0E-4 T 25-04-2016 IPR000489 Pterin-binding domain GO:0042558 RJP_RS00235 da348d7833f485c2f716a9cd2cb962f2 136 Gene3D G3DSA:3.30.70.560 2 62 2.3E-17 T 25-04-2016 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|UniPathway: UPA00077 RJP_RS00235 da348d7833f485c2f716a9cd2cb962f2 136 Pfam PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) 2 58 3.2E-12 T 25-04-2016 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|UniPathway: UPA00077 RJP_RS00235 da348d7833f485c2f716a9cd2cb962f2 136 SUPERFAMILY SSF55083 3 64 8.63E-18 T 25-04-2016 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|UniPathway: UPA00077 RJP_RS00235 da348d7833f485c2f716a9cd2cb962f2 136 TIGRFAM TIGR01498 folK: 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase 2 56 2.5E-15 T 25-04-2016 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|UniPathway: UPA00077 RJP_RS00235 da348d7833f485c2f716a9cd2cb962f2 136 PANTHER PTHR20941 3 134 3.7E-24 T 25-04-2016 RJP_RS00895 b0ab4b9ee32cdc136bd725b0c7724356 319 PANTHER PTHR23264 94 306 2.1E-98 T 25-04-2016 IPR019591 Mrp/NBP35 ATP-binding protein RJP_RS00895 b0ab4b9ee32cdc136bd725b0c7724356 319 Hamap MF_02040 Iron-sulfur cluster carrier protein. 84 318 33.595 T 25-04-2016 IPR019591 Mrp/NBP35 ATP-binding protein RJP_RS00895 b0ab4b9ee32cdc136bd725b0c7724356 319 Gene3D G3DSA:3.40.50.300 87 307 1.6E-80 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RJP_RS00895 b0ab4b9ee32cdc136bd725b0c7724356 319 SUPERFAMILY SSF52540 83 307 7.07E-50 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RJP_RS00895 b0ab4b9ee32cdc136bd725b0c7724356 319 ProSitePatterns PS01215 Mrp family signature. 201 217 - T 25-04-2016 IPR000808 Mrp, conserved site GO:0005524 RJP_RS00895 b0ab4b9ee32cdc136bd725b0c7724356 319 Pfam PF10609 NUBPL iron-transfer P-loop NTPase 95 306 1.5E-78 T 25-04-2016 IPR019591 Mrp/NBP35 ATP-binding protein RJP_RS00680 1178ded8b1f54e9516fef5ec8e00dd3f 87 PANTHER PTHR38039:SF1 2 86 2.0E-28 T 25-04-2016 RJP_RS00680 1178ded8b1f54e9516fef5ec8e00dd3f 87 SUPERFAMILY SSF143011 3 84 4.45E-23 T 25-04-2016 RJP_RS00680 1178ded8b1f54e9516fef5ec8e00dd3f 87 TIGRFAM TIGR02116 toxin_Txe_YoeB: addiction module toxin, Txe/YoeB family 6 85 9.3E-29 T 25-04-2016 IPR009614 Toxin YoeB GO:0004519|GO:0006401 RJP_RS00680 1178ded8b1f54e9516fef5ec8e00dd3f 87 Pfam PF06769 YoeB-like toxin of bacterial type II toxin-antitoxin system 6 85 1.4E-30 T 25-04-2016 IPR009614 Toxin YoeB GO:0004519|GO:0006401 RJP_RS00680 1178ded8b1f54e9516fef5ec8e00dd3f 87 PANTHER PTHR38039 2 86 2.0E-28 T 25-04-2016 RJP_RS00890 3baa9b3f746b342cf6a6f6afc6531b83 348 PANTHER PTHR33986 63 345 9.0E-28 T 25-04-2016 RJP_RS00890 3baa9b3f746b342cf6a6f6afc6531b83 348 PANTHER PTHR33986:SF2 63 345 9.0E-28 T 25-04-2016 RJP_RS00890 3baa9b3f746b342cf6a6f6afc6531b83 348 Pfam PF06258 Mitochondrial fission ELM1 12 343 1.4E-89 T 25-04-2016 IPR009367 Mitochondrial fission protein ELM1-like RJP_RS00890 3baa9b3f746b342cf6a6f6afc6531b83 348 SUPERFAMILY SSF53756 1 346 1.36E-35 T 25-04-2016 RJP_RS06465 88aae538e21cd655649f8a2d50eba948 200 SUPERFAMILY SSF56024 62 197 7.63E-32 T 25-04-2016 RJP_RS06465 88aae538e21cd655649f8a2d50eba948 200 SMART SM00155 142 169 0.0031 T 25-04-2016 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 RJP_RS06465 88aae538e21cd655649f8a2d50eba948 200 Pfam PF13091 PLD-like domain 75 192 1.4E-25 T 25-04-2016 IPR025202 Phospholipase D-like domain RJP_RS06465 88aae538e21cd655649f8a2d50eba948 200 PANTHER PTHR21248 61 195 3.5E-36 T 25-04-2016 RJP_RS06465 88aae538e21cd655649f8a2d50eba948 200 Gene3D G3DSA:3.30.870.10 61 195 2.0E-33 T 25-04-2016 RJP_RS06860 ea6a985c6109339c0204e9217d24a616 154 Pfam PF04364 DNA polymerase III chi subunit, HolC 1 121 1.3E-17 T 25-04-2016 IPR007459 DNA polymerase III chi subunit, HolC GO:0003677|GO:0003887|GO:0006260 RJP_RS06860 ea6a985c6109339c0204e9217d24a616 154 Gene3D G3DSA:3.40.50.10110 14 124 7.4E-19 T 25-04-2016 IPR007459 DNA polymerase III chi subunit, HolC GO:0003677|GO:0003887|GO:0006260 RJP_RS06860 ea6a985c6109339c0204e9217d24a616 154 SUPERFAMILY SSF102400 1 136 2.88E-25 T 25-04-2016 IPR007459 DNA polymerase III chi subunit, HolC GO:0003677|GO:0003887|GO:0006260 RJP_RS01165 3c3ad8b55d3017dce06424ec2a92b2ca 264 Gene3D G3DSA:3.40.50.300 50 148 1.7E-24 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RJP_RS01165 3c3ad8b55d3017dce06424ec2a92b2ca 264 PANTHER PTHR11669:SF8 52 149 7.2E-23 T 25-04-2016 RJP_RS01165 3c3ad8b55d3017dce06424ec2a92b2ca 264 Pfam PF13177 DNA polymerase III, delta subunit 49 147 2.7E-25 T 25-04-2016 RJP_RS01165 3c3ad8b55d3017dce06424ec2a92b2ca 264 PANTHER PTHR11669 52 149 7.2E-23 T 25-04-2016 RJP_RS01165 3c3ad8b55d3017dce06424ec2a92b2ca 264 SUPERFAMILY SSF52540 61 181 1.03E-25 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RJP_RS00230 25c66f298d88013c7237cc4331dba7b3 84 SUPERFAMILY SSF51717 5 65 1.67E-6 T 25-04-2016 IPR011005 Dihydropteroate synthase-like GO:0044237 RJP_RS00335 acd28ada7afaecf3dc1d94bfd2716b64 91 ProDom PD512899 RC0057 1 91 3.0E-45 T 25-04-2016 RJP_RS00430 db4a112e66a4027b8706041251b17dac 387 Gene3D G3DSA:2.30.30.60 199 247 2.2E-11 T 25-04-2016 RJP_RS00430 db4a112e66a4027b8706041251b17dac 387 PANTHER PTHR30414 5 383 1.2E-63 T 25-04-2016 RJP_RS00430 db4a112e66a4027b8706041251b17dac 387 Pfam PF00924 Mechanosensitive ion channel 139 380 1.3E-49 T 25-04-2016 IPR006685 Mechanosensitive ion channel MscS GO:0016020|GO:0055085 RJP_RS00430 db4a112e66a4027b8706041251b17dac 387 PANTHER PTHR30414:SF0 5 383 1.2E-63 T 25-04-2016 IPR030192 Miniconductance mechanosensitive channel YbdG GO:0008381|GO:0016021|GO:0071470 RJP_RS00430 db4a112e66a4027b8706041251b17dac 387 SUPERFAMILY SSF50182 182 247 3.07E-12 T 25-04-2016 IPR010920 LSM domain RJP_RS06990 4b112d72dd38cb21850504565998f458 346 PANTHER PTHR21091:SF2 15 340 1.0E-112 T 25-04-2016 RJP_RS06990 4b112d72dd38cb21850504565998f458 346 Gene3D G3DSA:3.20.20.210 13 339 1.0E-116 T 25-04-2016 RJP_RS06990 4b112d72dd38cb21850504565998f458 346 ProSitePatterns PS00906 Uroporphyrinogen decarboxylase signature 1. 16 25 - T 25-04-2016 IPR000257 Uroporphyrinogen decarboxylase (URO-D) GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|UniPathway: UPA00251 RJP_RS06990 4b112d72dd38cb21850504565998f458 346 PANTHER PTHR21091 15 340 1.0E-112 T 25-04-2016 RJP_RS06990 4b112d72dd38cb21850504565998f458 346 Hamap MF_00218 Uroporphyrinogen decarboxylase [hemE]. 1 338 45.795 T 25-04-2016 IPR006361 Uroporphyrinogen decarboxylase HemE GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|UniPathway: UPA00251 RJP_RS06990 4b112d72dd38cb21850504565998f458 346 Pfam PF01208 Uroporphyrinogen decarboxylase (URO-D) 13 335 6.9E-108 T 25-04-2016 IPR000257 Uroporphyrinogen decarboxylase (URO-D) GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|UniPathway: UPA00251 RJP_RS06990 4b112d72dd38cb21850504565998f458 346 SUPERFAMILY SSF51726 13 339 1.69E-96 T 25-04-2016 RJP_RS06990 4b112d72dd38cb21850504565998f458 346 ProSitePatterns PS00907 Uroporphyrinogen decarboxylase signature 2. 134 150 - T 25-04-2016 IPR000257 Uroporphyrinogen decarboxylase (URO-D) GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|UniPathway: UPA00251 RJP_RS06990 4b112d72dd38cb21850504565998f458 346 TIGRFAM TIGR01464 hemE: uroporphyrinogen decarboxylase 7 335 3.4E-129 T 25-04-2016 IPR006361 Uroporphyrinogen decarboxylase HemE GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|UniPathway: UPA00251 RJP_RS05555 10dace550354fd8b280c22b4f68064f9 114 Pfam PF05534 HicB family 69 108 8.0E-13 T 25-04-2016 IPR008651 Uncharacterised protein family HicB RJP_RS05555 10dace550354fd8b280c22b4f68064f9 114 SUPERFAMILY SSF143100 10 73 1.14E-9 T 25-04-2016 RJP_RS05555 10dace550354fd8b280c22b4f68064f9 114 SUPERFAMILY SSF47598 72 112 5.86E-5 T 25-04-2016 IPR010985 Ribbon-helix-helix GO:0006355 RJP_RS01060 ddd81d2a827d3407eb9b556da788b259 100 Hamap MF_00122 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit C [gatC]. 1 100 21.716 T 25-04-2016 IPR003837 Glu-tRNAGln amidotransferase C subunit GO:0006450 RJP_RS01060 ddd81d2a827d3407eb9b556da788b259 100 TIGRFAM TIGR00135 gatC: aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, C subunit 2 99 8.1E-19 T 25-04-2016 IPR003837 Glu-tRNAGln amidotransferase C subunit GO:0006450 RJP_RS01060 ddd81d2a827d3407eb9b556da788b259 100 PANTHER PTHR15004 1 100 1.3E-14 T 25-04-2016 RJP_RS01060 ddd81d2a827d3407eb9b556da788b259 100 Pfam PF02686 Glu-tRNAGln amidotransferase C subunit 18 79 1.6E-11 T 25-04-2016 IPR003837 Glu-tRNAGln amidotransferase C subunit GO:0006450 RJP_RS01060 ddd81d2a827d3407eb9b556da788b259 100 PANTHER PTHR15004:SF0 1 100 1.3E-14 T 25-04-2016 RJP_RS01060 ddd81d2a827d3407eb9b556da788b259 100 SUPERFAMILY SSF141000 1 98 7.59E-22 T 25-04-2016 IPR003837 Glu-tRNAGln amidotransferase C subunit GO:0006450 RJP_RS01465 1f72b1c26f5ef53901a29591d3aa31d2 61 Pfam PF04588 Hypoxia induced protein conserved region 4 52 4.1E-8 T 25-04-2016 IPR007667 Hypoxia induced protein, domain RJP_RS06815 aba28e1f7ab53172a6cefc915655279a 231 ProSitePatterns PS00141 Eukaryotic and viral aspartyl proteases active site. 137 148 - T 25-04-2016 IPR001969 Aspartic peptidase, active site GO:0004190|GO:0006508 RJP_RS06815 aba28e1f7ab53172a6cefc915655279a 231 Pfam PF13975 gag-polyprotein putative aspartyl protease 127 216 1.4E-18 T 25-04-2016 RJP_RS06815 aba28e1f7ab53172a6cefc915655279a 231 PANTHER PTHR41535 48 229 3.6E-19 T 25-04-2016 RJP_RS06815 aba28e1f7ab53172a6cefc915655279a 231 SUPERFAMILY SSF50630 116 219 1.33E-17 T 25-04-2016 IPR021109 Aspartic peptidase domain RJP_RS06815 aba28e1f7ab53172a6cefc915655279a 231 PANTHER PTHR41535:SF1 48 229 3.6E-19 T 25-04-2016 RJP_RS06815 aba28e1f7ab53172a6cefc915655279a 231 TIGRFAM TIGR02281 clan_AA_DTGA: clan AA aspartic protease, TIGR02281 family 114 230 1.6E-39 T 25-04-2016 IPR011969 Clan AA aspartic peptidase, C-terminal RJP_RS00200 f6b996c77abb400ada05604165339893 173 SUPERFAMILY SSF141259 9 77 7.32E-16 T 25-04-2016 IPR003711 CarD-like/TRCF domain RJP_RS00200 f6b996c77abb400ada05604165339893 173 SMART SM01058 12 122 7.0E-33 T 25-04-2016 IPR003711 CarD-like/TRCF domain RJP_RS00200 f6b996c77abb400ada05604165339893 173 Pfam PF02559 CarD-like/TRCF domain 13 120 1.0E-12 T 25-04-2016 IPR003711 CarD-like/TRCF domain RJP_RS00200 f6b996c77abb400ada05604165339893 173 PANTHER PTHR38447 7 167 3.9E-39 T 25-04-2016 RJP_RS03980 69269f1e5c053d4ea36181739c11bc13 67 Pfam PF04754 Putative transposase, YhgA-like 1 59 1.3E-10 T 25-04-2016 IPR006842 Transposase (putative), YhgA-like RJP_RS06785 ee4c1123f0f6333003a168b5c414bfb7 374 SMART SM01002 152 316 5.0E-79 T 25-04-2016 IPR007698 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, NAD(H)-binding domain RJP_RS06785 ee4c1123f0f6333003a168b5c414bfb7 374 Pfam PF01262 Alanine dehydrogenase/PNT, C-terminal domain 147 369 2.0E-69 T 25-04-2016 IPR007698 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, NAD(H)-binding domain RJP_RS06785 ee4c1123f0f6333003a168b5c414bfb7 374 Gene3D G3DSA:3.40.50.1770 3 193 7.5E-58 T 25-04-2016 RJP_RS06785 ee4c1123f0f6333003a168b5c414bfb7 374 PANTHER PTHR10160 1 368 5.4E-150 T 25-04-2016 RJP_RS06785 ee4c1123f0f6333003a168b5c414bfb7 374 Pfam PF05222 Alanine dehydrogenase/PNT, N-terminal domain 6 142 3.3E-35 T 25-04-2016 IPR007886 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, N-terminal RJP_RS06785 ee4c1123f0f6333003a168b5c414bfb7 374 SUPERFAMILY SSF51735 144 320 7.99E-38 T 25-04-2016 IPR016040 NAD(P)-binding domain RJP_RS06785 ee4c1123f0f6333003a168b5c414bfb7 374 PANTHER PTHR10160:SF19 1 368 5.4E-150 T 25-04-2016 RJP_RS06785 ee4c1123f0f6333003a168b5c414bfb7 374 Gene3D G3DSA:3.40.50.1770 194 367 3.0E-32 T 25-04-2016 RJP_RS06785 ee4c1123f0f6333003a168b5c414bfb7 374 SMART SM01003 4 143 8.7E-47 T 25-04-2016 IPR007886 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, N-terminal RJP_RS06785 ee4c1123f0f6333003a168b5c414bfb7 374 SUPERFAMILY SSF52283 1 173 8.08E-44 T 25-04-2016 RJP_RS04190 906c32b35ea6671a00677b072c1363b7 229 TIGRFAM TIGR00093 TIGR00093: pseudouridine synthase 67 223 3.3E-38 T 25-04-2016 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F GO:0001522|GO:0003723|GO:0009451|GO:0016866 RJP_RS04190 906c32b35ea6671a00677b072c1363b7 229 Gene3D G3DSA:3.10.290.10 3 63 1.3E-17 T 25-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 RJP_RS04190 906c32b35ea6671a00677b072c1363b7 229 PANTHER PTHR21600:SF2 3 225 6.9E-62 T 25-04-2016 RJP_RS04190 906c32b35ea6671a00677b072c1363b7 229 ProSitePatterns PS01149 Rsu family of pseudouridine synthase signature. 99 113 - T 25-04-2016 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0016866 RJP_RS04190 906c32b35ea6671a00677b072c1363b7 229 Pfam PF01479 S4 domain 3 47 2.1E-10 T 25-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 RJP_RS04190 906c32b35ea6671a00677b072c1363b7 229 PANTHER PTHR21600 3 225 6.9E-62 T 25-04-2016 RJP_RS04190 906c32b35ea6671a00677b072c1363b7 229 SMART SM00363 2 59 2.6E-11 T 25-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 RJP_RS04190 906c32b35ea6671a00677b072c1363b7 229 SUPERFAMILY SSF55174 3 89 5.59E-16 T 25-04-2016 RJP_RS04190 906c32b35ea6671a00677b072c1363b7 229 Pfam PF00849 RNA pseudouridylate synthase 63 192 1.7E-10 T 25-04-2016 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 RJP_RS04190 906c32b35ea6671a00677b072c1363b7 229 SUPERFAMILY SSF55120 61 224 1.13E-33 T 25-04-2016 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 RJP_RS04445 58e5079a5982aa9e5bc38f57d8296e27 175 PANTHER PTHR36302:SF1 64 165 1.7E-18 T 25-04-2016 RJP_RS04445 58e5079a5982aa9e5bc38f57d8296e27 175 Pfam PF04314 Protein of unknown function (DUF461) 50 157 2.9E-24 T 25-04-2016 IPR007410 DR1885-like metal-binding protein RJP_RS04445 58e5079a5982aa9e5bc38f57d8296e27 175 SUPERFAMILY SSF110087 7 169 1.57E-31 T 25-04-2016 IPR007410 DR1885-like metal-binding protein RJP_RS04445 58e5079a5982aa9e5bc38f57d8296e27 175 PANTHER PTHR36302 64 165 1.7E-18 T 25-04-2016 RJP_RS02920 b693863bff272925020cc778dd8e84fa 653 SUPERFAMILY SSF48435 27 474 4.45E-45 T 25-04-2016 IPR016026 Lytic transglycosylase, superhelical U-shaped and linker domain GO:0004553|GO:0042597 RJP_RS02920 b693863bff272925020cc778dd8e84fa 653 Gene3D G3DSA:1.10.530.10 492 638 3.6E-37 T 25-04-2016 RJP_RS02920 b693863bff272925020cc778dd8e84fa 653 PANTHER PTHR21666 492 634 3.2E-30 T 25-04-2016 RJP_RS02920 b693863bff272925020cc778dd8e84fa 653 SUPERFAMILY SSF53955 492 638 1.88E-37 T 25-04-2016 IPR023346 Lysozyme-like domain RJP_RS02920 b693863bff272925020cc778dd8e84fa 653 Pfam PF01464 Transglycosylase SLT domain 492 594 5.5E-21 T 25-04-2016 IPR008258 Transglycosylase SLT domain 1 RJP_RS02920 b693863bff272925020cc778dd8e84fa 653 Gene3D G3DSA:1.25.20.10 28 230 2.7E-12 T 25-04-2016 IPR008939 Lytic transglycosylase, superhelical U-shaped GO:0004553|GO:0042597 RJP_RS02920 b693863bff272925020cc778dd8e84fa 653 Gene3D G3DSA:1.25.20.10 349 388 6.5E-8 T 25-04-2016 IPR008939 Lytic transglycosylase, superhelical U-shaped GO:0004553|GO:0042597 RJP_RS06505 5b4f0cfa83295c69fdb16d130aa92e72 259 Hamap MF_01974 Methionine aminopeptidase [map]. 3 250 42.298 T 25-04-2016 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 GO:0004177|GO:0006508|GO:0008235 RJP_RS06505 5b4f0cfa83295c69fdb16d130aa92e72 259 PANTHER PTHR10804 1 259 2.6E-134 T 25-04-2016 RJP_RS06505 5b4f0cfa83295c69fdb16d130aa92e72 259 SUPERFAMILY SSF55920 5 252 2.88E-89 T 25-04-2016 IPR000994 Peptidase M24, structural domain RJP_RS06505 5b4f0cfa83295c69fdb16d130aa92e72 259 PRINTS PR00599 Methionine aminopeptidase-1 signature 90 106 1.7E-22 T 25-04-2016 IPR001714 Peptidase M24, methionine aminopeptidase RJP_RS06505 5b4f0cfa83295c69fdb16d130aa92e72 259 PRINTS PR00599 Methionine aminopeptidase-1 signature 160 172 1.7E-22 T 25-04-2016 IPR001714 Peptidase M24, methionine aminopeptidase RJP_RS06505 5b4f0cfa83295c69fdb16d130aa92e72 259 PRINTS PR00599 Methionine aminopeptidase-1 signature 68 81 1.7E-22 T 25-04-2016 IPR001714 Peptidase M24, methionine aminopeptidase RJP_RS06505 5b4f0cfa83295c69fdb16d130aa92e72 259 PRINTS PR00599 Methionine aminopeptidase-1 signature 191 203 1.7E-22 T 25-04-2016 IPR001714 Peptidase M24, methionine aminopeptidase RJP_RS06505 5b4f0cfa83295c69fdb16d130aa92e72 259 TIGRFAM TIGR00500 met_pdase_I: methionine aminopeptidase, type I 3 249 6.9E-94 T 25-04-2016 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 GO:0004177|GO:0006508|GO:0008235 RJP_RS06505 5b4f0cfa83295c69fdb16d130aa92e72 259 ProSitePatterns PS00680 Methionine aminopeptidase subfamily 1 signature. 166 184 - T 25-04-2016 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 GO:0004177|GO:0006508|GO:0008235 RJP_RS06505 5b4f0cfa83295c69fdb16d130aa92e72 259 Gene3D G3DSA:3.90.230.10 3 254 8.9E-95 T 25-04-2016 IPR000994 Peptidase M24, structural domain RJP_RS06505 5b4f0cfa83295c69fdb16d130aa92e72 259 Pfam PF00557 Metallopeptidase family M24 13 241 4.4E-54 T 25-04-2016 IPR000994 Peptidase M24, structural domain RJP_RS06505 5b4f0cfa83295c69fdb16d130aa92e72 259 PANTHER PTHR10804:SF82 1 259 2.6E-134 T 25-04-2016 RJP_RS02205 0e4f1e4a44562a2d94258ed14466a25b 188 Hamap MF_00155 Cytochrome c oxidase assembly protein CtaG [ctaG]. 1 180 38.745 T 25-04-2016 IPR007533 Cytochrome c oxidase assembly protein CtaG/Cox11 GO:0005507 RJP_RS02205 0e4f1e4a44562a2d94258ed14466a25b 188 PIRSF PIRSF005413 1 188 1.2E-71 T 25-04-2016 IPR007533 Cytochrome c oxidase assembly protein CtaG/Cox11 GO:0005507 RJP_RS02205 0e4f1e4a44562a2d94258ed14466a25b 188 SUPERFAMILY SSF110111 53 176 1.7E-47 T 25-04-2016 IPR023471 Cytochrome c oxidase assembly protein CtaG/Cox11, domain RJP_RS02205 0e4f1e4a44562a2d94258ed14466a25b 188 Gene3D G3DSA:2.60.370.10 53 180 3.1E-51 T 25-04-2016 IPR023471 Cytochrome c oxidase assembly protein CtaG/Cox11, domain RJP_RS02205 0e4f1e4a44562a2d94258ed14466a25b 188 PANTHER PTHR21320 3 181 7.1E-66 T 25-04-2016 IPR007533 Cytochrome c oxidase assembly protein CtaG/Cox11 GO:0005507 RJP_RS02205 0e4f1e4a44562a2d94258ed14466a25b 188 Pfam PF04442 Cytochrome c oxidase assembly protein CtaG/Cox11 27 174 2.2E-55 T 25-04-2016 IPR007533 Cytochrome c oxidase assembly protein CtaG/Cox11 GO:0005507 RJP_RS02205 0e4f1e4a44562a2d94258ed14466a25b 188 PANTHER PTHR21320:SF3 3 181 7.1E-66 T 25-04-2016 RJP_RS04850 d3cb5f3e4bd24b3436de8435a52f646c 533 SUPERFAMILY SSF48403 279 414 4.35E-7 T 25-04-2016 IPR020683 Ankyrin repeat-containing domain RJP_RS02120 ab52bd60f4a157f0667006c9317eddfd 334 Gene3D G3DSA:3.40.50.300 145 323 9.7E-46 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RJP_RS02120 ab52bd60f4a157f0667006c9317eddfd 334 PANTHER PTHR30258 148 322 2.0E-64 T 25-04-2016 RJP_RS02120 ab52bd60f4a157f0667006c9317eddfd 334 PANTHER PTHR30258 12 126 2.0E-64 T 25-04-2016 RJP_RS02120 ab52bd60f4a157f0667006c9317eddfd 334 SUPERFAMILY SSF52540 14 316 8.91E-44 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RJP_RS02120 ab52bd60f4a157f0667006c9317eddfd 334 Pfam PF00437 Type II/IV secretion system protein 13 311 4.0E-96 T 25-04-2016 IPR001482 Type II secretion system protein E GO:0005524|GO:0006810 RJP_RS02120 ab52bd60f4a157f0667006c9317eddfd 334 PANTHER PTHR30258:SF12 148 322 2.0E-64 T 25-04-2016 RJP_RS02120 ab52bd60f4a157f0667006c9317eddfd 334 PANTHER PTHR30258:SF12 12 126 2.0E-64 T 25-04-2016 RJP_RS02120 ab52bd60f4a157f0667006c9317eddfd 334 Gene3D G3DSA:3.30.450.90 12 108 4.8E-31 T 25-04-2016 RJP_RS02120 ab52bd60f4a157f0667006c9317eddfd 334 TIGRFAM TIGR02788 VirB11: P-type DNA transfer ATPase VirB11 19 324 1.8E-117 T 25-04-2016 IPR014155 Type IV secretion system protein VirB11 GO:0005737|GO:0006810|GO:0009405 RJP_RS05180 5a2491e4bbc234bb265aa00a40358e41 122 ProSitePatterns PS00049 Ribosomal protein L14 signature. 60 86 - T 25-04-2016 IPR019972 Ribosomal protein L14P, conserved site RJP_RS05180 5a2491e4bbc234bb265aa00a40358e41 122 Pfam PF00238 Ribosomal protein L14p/L23e 1 122 4.3E-52 T 25-04-2016 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 RJP_RS05180 5a2491e4bbc234bb265aa00a40358e41 122 Hamap MF_01367 50S ribosomal protein L14 [rplN]. 1 122 26.253 T 25-04-2016 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 RJP_RS05180 5a2491e4bbc234bb265aa00a40358e41 122 TIGRFAM TIGR01067 rplN_bact: ribosomal protein uL14 1 122 1.6E-56 T 25-04-2016 IPR005745 Ribosomal protein L14P, bacterial-type GO:0003735|GO:0006412|GO:0015934 RJP_RS05180 5a2491e4bbc234bb265aa00a40358e41 122 PANTHER PTHR11761:SF3 1 122 4.1E-66 T 25-04-2016 RJP_RS05180 5a2491e4bbc234bb265aa00a40358e41 122 SMART SM01374 1 122 1.3E-78 T 25-04-2016 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 RJP_RS05180 5a2491e4bbc234bb265aa00a40358e41 122 PANTHER PTHR11761 1 122 4.1E-66 T 25-04-2016 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 RJP_RS05180 5a2491e4bbc234bb265aa00a40358e41 122 Gene3D G3DSA:2.40.150.20 1 122 3.6E-51 T 25-04-2016 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 RJP_RS05180 5a2491e4bbc234bb265aa00a40358e41 122 SUPERFAMILY SSF50193 1 122 1.57E-48 T 25-04-2016 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 RJP_RS01065 24fa65ddea75d751edba2d46ea923a66 186 PANTHER PTHR20982 6 186 2.0E-71 T 25-04-2016 IPR002661 Ribosome recycling factor GO:0006412 RJP_RS01065 24fa65ddea75d751edba2d46ea923a66 186 Pfam PF01765 Ribosome recycling factor 22 184 6.1E-60 T 25-04-2016 IPR023584 Ribosome recycling factor domain RJP_RS01065 24fa65ddea75d751edba2d46ea923a66 186 Gene3D G3DSA:1.10.132.20 68 186 1.5E-41 T 25-04-2016 IPR023584 Ribosome recycling factor domain RJP_RS01065 24fa65ddea75d751edba2d46ea923a66 186 Hamap MF_00040 Ribosome-recycling factor [frr]. 4 186 26.466 T 25-04-2016 IPR002661 Ribosome recycling factor GO:0006412 RJP_RS01065 24fa65ddea75d751edba2d46ea923a66 186 TIGRFAM TIGR00496 frr: ribosome recycling factor 11 186 3.5E-69 T 25-04-2016 IPR002661 Ribosome recycling factor GO:0006412 RJP_RS01065 24fa65ddea75d751edba2d46ea923a66 186 SUPERFAMILY SSF55194 5 185 1.06E-67 T 25-04-2016 IPR023584 Ribosome recycling factor domain RJP_RS06130 e6109762f5ffb61208215524ca6e45c7 66 SUPERFAMILY SSF57829 1 55 3.24E-19 T 25-04-2016 IPR011332 Zinc-binding ribosomal protein GO:0006412 RJP_RS06130 e6109762f5ffb61208215524ca6e45c7 66 Pfam PF01783 Ribosomal L32p protein family 2 56 3.0E-21 T 25-04-2016 IPR002677 Ribosomal protein L32p GO:0003735|GO:0006412|GO:0015934 RJP_RS06130 e6109762f5ffb61208215524ca6e45c7 66 Hamap MF_00340 50S ribosomal protein L32 [rpmF]. 1 55 19.128 T 25-04-2016 IPR002677 Ribosomal protein L32p GO:0003735|GO:0006412|GO:0015934 RJP_RS06130 e6109762f5ffb61208215524ca6e45c7 66 PANTHER PTHR35534 1 61 2.0E-21 T 25-04-2016 RJP_RS06130 e6109762f5ffb61208215524ca6e45c7 66 TIGRFAM TIGR01031 rpmF_bact: ribosomal protein bL32 2 55 2.4E-22 T 25-04-2016 IPR002677 Ribosomal protein L32p GO:0003735|GO:0006412|GO:0015934 RJP_RS05460 81403c593cee6d4b0d611396680fcd0d 282 PANTHER PTHR11048 11 279 6.5E-72 T 25-04-2016 RJP_RS05460 81403c593cee6d4b0d611396680fcd0d 282 Pfam PF01040 UbiA prenyltransferase family 26 267 1.8E-49 T 25-04-2016 IPR000537 UbiA prenyltransferase family GO:0004659|GO:0016021 RJP_RS05460 81403c593cee6d4b0d611396680fcd0d 282 TIGRFAM TIGR01474 ubiA_proteo: 4-hydroxybenzoate polyprenyl transferase 10 279 2.7E-99 T 25-04-2016 IPR006370 4-hydroxybenzoate polyprenyltransferase GO:0004659|GO:0016021 UniPathway: UPA00232 RJP_RS05460 81403c593cee6d4b0d611396680fcd0d 282 ProSitePatterns PS00943 UbiA prenyltransferase family signature. 65 87 - T 25-04-2016 IPR030470 UbiA prenyltransferase conserved site RJP_RS05460 81403c593cee6d4b0d611396680fcd0d 282 PANTHER PTHR11048:SF28 11 279 6.5E-72 T 25-04-2016 RJP_RS00575 d98270ac0e5900e7c36a6c4bc38f8a65 438 Gene3D G3DSA:2.40.160.10 258 438 1.1E-14 T 25-04-2016 IPR023614 Porin domain RJP_RS00575 d98270ac0e5900e7c36a6c4bc38f8a65 438 Gene3D G3DSA:2.40.160.10 35 219 1.1E-14 T 25-04-2016 IPR023614 Porin domain RJP_RS00575 d98270ac0e5900e7c36a6c4bc38f8a65 438 SUPERFAMILY SSF56935 249 438 1.04E-19 T 25-04-2016 RJP_RS00575 d98270ac0e5900e7c36a6c4bc38f8a65 438 SUPERFAMILY SSF56935 88 210 1.04E-19 T 25-04-2016 RJP_RS00575 d98270ac0e5900e7c36a6c4bc38f8a65 438 Pfam PF13609 Gram-negative porin 12 412 2.9E-23 T 25-04-2016 RJP_RS00265 f2709498276578e6a988e404fa4b27ea 198 Gene3D G3DSA:3.40.30.10 19 191 9.3E-38 T 25-04-2016 IPR012336 Thioredoxin-like fold RJP_RS00265 f2709498276578e6a988e404fa4b27ea 198 PANTHER PTHR12151 8 190 3.5E-30 T 25-04-2016 IPR003782 Copper chaperone SCO1/SenC RJP_RS00265 f2709498276578e6a988e404fa4b27ea 198 Pfam PF02630 SCO1/SenC 15 191 2.3E-59 T 25-04-2016 IPR003782 Copper chaperone SCO1/SenC RJP_RS00265 f2709498276578e6a988e404fa4b27ea 198 SUPERFAMILY SSF52833 54 193 3.49E-29 T 25-04-2016 IPR012336 Thioredoxin-like fold RJP_RS02625 ee36e52c58830765016569945e0653da 157 Pfam PF09923 Uncharacterized protein conserved in bacteria (DUF2155) 67 156 2.4E-17 T 25-04-2016 IPR019225 Protein of unknown function DUF2155 RJP_RS06615 6c89d07984577ff84f5dea0a5d2ee660 68 SUPERFAMILY SSF53955 2 64 1.02E-20 T 25-04-2016 IPR023346 Lysozyme-like domain RJP_RS06615 6c89d07984577ff84f5dea0a5d2ee660 68 Pfam PF00959 Phage lysozyme 3 64 6.4E-12 T 25-04-2016 IPR002196 Glycoside hydrolase, family 24 GO:0003796|GO:0009253|GO:0016998 RJP_RS06615 6c89d07984577ff84f5dea0a5d2ee660 68 Gene3D G3DSA:1.10.530.40 2 65 3.9E-21 T 25-04-2016 IPR023347 Lysozyme domain GO:0003796 RJP_RS06615 6c89d07984577ff84f5dea0a5d2ee660 68 PANTHER PTHR38107 2 64 1.5E-18 T 25-04-2016 RJP_RS06615 6c89d07984577ff84f5dea0a5d2ee660 68 PANTHER PTHR38107:SF2 2 64 1.5E-18 T 25-04-2016 RJP_RS06095 96123c24a4dc94f62468f1fea199a76b 279 PIRSF PIRSF038471 18 278 1.3E-47 T 25-04-2016 IPR007221 Rod shape-determining protein MreC GO:0008360 RJP_RS06095 96123c24a4dc94f62468f1fea199a76b 279 PANTHER PTHR34138 15 278 1.5E-46 T 25-04-2016 RJP_RS06095 96123c24a4dc94f62468f1fea199a76b 279 TIGRFAM TIGR00219 mreC: rod shape-determining protein MreC 48 258 1.3E-31 T 25-04-2016 IPR007221 Rod shape-determining protein MreC GO:0008360 RJP_RS06095 96123c24a4dc94f62468f1fea199a76b 279 Pfam PF04085 rod shape-determining protein MreC 140 275 2.0E-33 T 25-04-2016 IPR007221 Rod shape-determining protein MreC GO:0008360 RJP_RS06095 96123c24a4dc94f62468f1fea199a76b 279 PANTHER PTHR34138:SF1 15 278 1.5E-46 T 25-04-2016 RJP_RS01840 e2e33bd234e147dec9479a029de3fd03 336 PANTHER PTHR23289:SF2 5 328 5.7E-100 T 25-04-2016 RJP_RS01840 e2e33bd234e147dec9479a029de3fd03 336 Pfam PF02628 Cytochrome oxidase assembly protein 8 326 1.5E-100 T 25-04-2016 IPR003780 COX15/CtaA family GO:0006784|GO:0016021|GO:0016627|GO:0055114 UniPathway: UPA00269 RJP_RS01840 e2e33bd234e147dec9479a029de3fd03 336 Hamap MF_01665 Heme A synthase [ctaA]. 3 336 22.577 T 25-04-2016 IPR023754 Heme A synthase, type 2 GO:0006784|GO:0016020|GO:0016627|GO:0055114 UniPathway: UPA00269 RJP_RS01840 e2e33bd234e147dec9479a029de3fd03 336 PANTHER PTHR23289 5 328 5.7E-100 T 25-04-2016 RJP_RS02145 32aca0d3644ac149805f32a21b987d63 149 Pfam PF04860 Phage portal protein 45 129 7.9E-14 T 25-04-2016 IPR006944 Bacteriophage/Gene transfer agent portal protein RJP_RS06240 447fca192f28c319b89926b94a87184a 85 SUPERFAMILY SSF47413 27 69 9.12E-11 T 25-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 RJP_RS06240 447fca192f28c319b89926b94a87184a 85 SMART SM00530 25 79 3.7E-5 T 25-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 RJP_RS06240 447fca192f28c319b89926b94a87184a 85 Pfam PF01381 Helix-turn-helix 27 63 3.9E-9 T 25-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 RJP_RS06240 447fca192f28c319b89926b94a87184a 85 PANTHER PTHR36511:SF2 24 83 1.8E-17 T 25-04-2016 RJP_RS06240 447fca192f28c319b89926b94a87184a 85 PANTHER PTHR36511 24 83 1.8E-17 T 25-04-2016 RJP_RS06240 447fca192f28c319b89926b94a87184a 85 Gene3D G3DSA:1.10.260.40 25 76 2.8E-19 T 25-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 RJP_RS04515 f23340b2a953fbada749ade8c008a52a 70 Gene3D G3DSA:1.25.40.20 8 62 4.5E-7 T 25-04-2016 IPR020683 Ankyrin repeat-containing domain RJP_RS04515 f23340b2a953fbada749ade8c008a52a 70 Pfam PF00023 Ankyrin repeat 8 24 0.015 T 25-04-2016 IPR002110 Ankyrin repeat GO:0005515 RJP_RS04515 f23340b2a953fbada749ade8c008a52a 70 SUPERFAMILY SSF48403 8 63 5.72E-7 T 25-04-2016 IPR020683 Ankyrin repeat-containing domain RJP_RS03030 5a28567042540ab3c44ce958572490d6 78 Pfam PF00873 AcrB/AcrD/AcrF family 3 75 1.5E-13 T 25-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 RJP_RS03030 5a28567042540ab3c44ce958572490d6 78 PANTHER PTHR32063 1 75 8.3E-24 T 25-04-2016 RJP_RS03030 5a28567042540ab3c44ce958572490d6 78 PRINTS PR00702 Acriflavin resistance protein family signature 10 34 7.1E-7 T 25-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 RJP_RS03030 5a28567042540ab3c44ce958572490d6 78 PRINTS PR00702 Acriflavin resistance protein family signature 38 56 7.1E-7 T 25-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 RJP_RS03030 5a28567042540ab3c44ce958572490d6 78 PANTHER PTHR32063:SF21 1 75 8.3E-24 T 25-04-2016 RJP_RS00875 3d41d53dbd7029a6a51a6bd7fe9bdefa 230 SUPERFAMILY SSF75217 2 175 2.16E-31 T 25-04-2016 IPR029028 Alpha/beta knot methyltransferases RJP_RS00875 3d41d53dbd7029a6a51a6bd7fe9bdefa 230 Gene3D G3DSA:3.40.1280.10 2 162 2.2E-29 T 25-04-2016 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal RJP_RS00875 3d41d53dbd7029a6a51a6bd7fe9bdefa 230 TIGRFAM TIGR00050 rRNA_methyl_1: RNA methyltransferase, TrmH family, group 1 4 229 3.1E-52 T 25-04-2016 IPR004384 RNA methyltransferase TrmH, group 1 GO:0006396|GO:0008173 KEGG: 00260+2.1.1.20|MetaCyc: PWY-6004 RJP_RS00875 3d41d53dbd7029a6a51a6bd7fe9bdefa 230 Pfam PF00588 SpoU rRNA Methylase family 4 149 2.1E-30 T 25-04-2016 IPR001537 tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008173 RJP_RS00875 3d41d53dbd7029a6a51a6bd7fe9bdefa 230 PANTHER PTHR12029:SF54 5 176 2.8E-26 T 25-04-2016 RJP_RS00875 3d41d53dbd7029a6a51a6bd7fe9bdefa 230 PANTHER PTHR12029 5 176 2.8E-26 T 25-04-2016 RJP_RS00875 3d41d53dbd7029a6a51a6bd7fe9bdefa 230 PIRSF PIRSF004808 1 230 7.5E-76 T 25-04-2016 IPR004384 RNA methyltransferase TrmH, group 1 GO:0006396|GO:0008173 KEGG: 00260+2.1.1.20|MetaCyc: PWY-6004 RJP_RS01910 5578151cdbe56e51a1c7d4f7959d46bf 152 ProDom PD203944 RP269 1 136 4.0E-75 T 25-04-2016 IPR022714 Protein of unknown function DUF2670 RJP_RS01910 5578151cdbe56e51a1c7d4f7959d46bf 152 Pfam PF10875 Protein of unknown function (DUF2670) 1 139 1.2E-80 T 25-04-2016 IPR022714 Protein of unknown function DUF2670 RJP_RS01775 89b48401322cf9193896c59e71375d2b 80 Pfam PF01722 BolA-like protein 14 79 7.4E-20 T 25-04-2016 IPR002634 BolA protein RJP_RS01775 89b48401322cf9193896c59e71375d2b 80 SUPERFAMILY SSF82657 3 78 3.27E-16 T 25-04-2016 IPR002634 BolA protein RJP_RS01775 89b48401322cf9193896c59e71375d2b 80 PANTHER PTHR12735 1 79 4.3E-13 T 25-04-2016 RJP_RS01775 89b48401322cf9193896c59e71375d2b 80 PIRSF PIRSF003113 1 80 2.2E-20 T 25-04-2016 IPR002634 BolA protein RJP_RS01775 89b48401322cf9193896c59e71375d2b 80 PANTHER PTHR12735:SF21 1 79 4.3E-13 T 25-04-2016 RJP_RS01775 89b48401322cf9193896c59e71375d2b 80 Gene3D G3DSA:3.30.70.1500 3 79 9.3E-20 T 25-04-2016 RJP_RS00025 e0c82f851992683eb54c884484bfd3a6 249 SUPERFAMILY SSF52540 42 240 1.3E-40 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RJP_RS00025 e0c82f851992683eb54c884484bfd3a6 249 PANTHER PTHR24220:SF117 25 246 4.0E-60 T 25-04-2016 RJP_RS00025 e0c82f851992683eb54c884484bfd3a6 249 Gene3D G3DSA:3.40.50.300 42 243 4.0E-43 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RJP_RS00025 e0c82f851992683eb54c884484bfd3a6 249 PANTHER PTHR24220 25 246 4.0E-60 T 25-04-2016 RJP_RS00025 e0c82f851992683eb54c884484bfd3a6 249 SMART SM00382 56 236 2.9E-7 T 25-04-2016 IPR003593 AAA+ ATPase domain RJP_RS00025 e0c82f851992683eb54c884484bfd3a6 249 Pfam PF00005 ABC transporter 47 179 4.0E-18 T 25-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 RJP_RS00025 e0c82f851992683eb54c884484bfd3a6 249 ProSitePatterns PS00211 ABC transporters family signature. 152 166 - T 25-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 RJP_RS06315 6b5409867d7890e797faf5e55e800a37 184 PANTHER PTHR11910 10 181 1.5E-33 T 25-04-2016 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 RJP_RS06315 6b5409867d7890e797faf5e55e800a37 184 Gene3D G3DSA:1.10.520.20 8 107 3.0E-16 T 25-04-2016 IPR026015 F1F0 ATP synthase OSCP/delta subunit, N-terminal domain RJP_RS06315 6b5409867d7890e797faf5e55e800a37 184 TIGRFAM TIGR01145 ATP_synt_delta: ATP synthase F1, delta subunit 9 177 2.1E-32 T 25-04-2016 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 RJP_RS06315 6b5409867d7890e797faf5e55e800a37 184 Hamap MF_01416 ATP synthase subunit delta [atpD]. 2 179 16.979 T 25-04-2016 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 RJP_RS06315 6b5409867d7890e797faf5e55e800a37 184 PRINTS PR00125 ATP synthase delta subunit signature 6 25 8.6E-18 T 25-04-2016 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 RJP_RS06315 6b5409867d7890e797faf5e55e800a37 184 PRINTS PR00125 ATP synthase delta subunit signature 76 87 8.6E-18 T 25-04-2016 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 RJP_RS06315 6b5409867d7890e797faf5e55e800a37 184 PRINTS PR00125 ATP synthase delta subunit signature 87 101 8.6E-18 T 25-04-2016 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 RJP_RS06315 6b5409867d7890e797faf5e55e800a37 184 PRINTS PR00125 ATP synthase delta subunit signature 152 170 8.6E-18 T 25-04-2016 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 RJP_RS06315 6b5409867d7890e797faf5e55e800a37 184 PRINTS PR00125 ATP synthase delta subunit signature 137 152 8.6E-18 T 25-04-2016 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 RJP_RS06315 6b5409867d7890e797faf5e55e800a37 184 SUPERFAMILY SSF47928 6 107 2.62E-20 T 25-04-2016 IPR026015 F1F0 ATP synthase OSCP/delta subunit, N-terminal domain RJP_RS06315 6b5409867d7890e797faf5e55e800a37 184 Pfam PF00213 ATP synthase delta (OSCP) subunit 8 177 1.2E-37 T 25-04-2016 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 RJP_RS06380 5186048f9d6d1e1805b4c1de0a68b2dd 108 Hamap MF_01477 Ribosomal silencing factor RsfS [rsfS]. 5 107 21.571 T 25-04-2016 IPR004394 Protein Iojap/ribosomal silencing factor RsfS RJP_RS06380 5186048f9d6d1e1805b4c1de0a68b2dd 108 Pfam PF02410 Ribosomal silencing factor during starvation 12 106 1.2E-23 T 25-04-2016 RJP_RS06380 5186048f9d6d1e1805b4c1de0a68b2dd 108 Gene3D G3DSA:3.30.460.10 5 107 1.8E-30 T 25-04-2016 RJP_RS06380 5186048f9d6d1e1805b4c1de0a68b2dd 108 SUPERFAMILY SSF81301 5 107 3.11E-29 T 25-04-2016 RJP_RS06380 5186048f9d6d1e1805b4c1de0a68b2dd 108 PANTHER PTHR21043 2 106 7.8E-26 T 25-04-2016 IPR004394 Protein Iojap/ribosomal silencing factor RsfS RJP_RS06380 5186048f9d6d1e1805b4c1de0a68b2dd 108 TIGRFAM TIGR00090 rsfS_iojap_ybeB: ribosome silencing factor 11 106 3.6E-30 T 25-04-2016 IPR004394 Protein Iojap/ribosomal silencing factor RsfS RJP_RS00500 64899e59fff0e6a615025f9031e88892 192 PANTHER PTHR31760:SF0 2 166 1.0E-30 T 25-04-2016 RJP_RS00500 64899e59fff0e6a615025f9031e88892 192 SUPERFAMILY SSF53335 3 170 5.69E-27 T 25-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RJP_RS00500 64899e59fff0e6a615025f9031e88892 192 PANTHER PTHR31760 2 166 1.0E-30 T 25-04-2016 RJP_RS00500 64899e59fff0e6a615025f9031e88892 192 Hamap MF_00074 Ribosomal RNA small subunit methyltransferase G [rsmG]. 1 191 21.942 T 25-04-2016 IPR003682 rRNA small subunit methyltransferase G GO:0005737|GO:0006364|GO:0008649 RJP_RS00500 64899e59fff0e6a615025f9031e88892 192 TIGRFAM TIGR00138 rsmG_gidB: 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG 12 177 1.3E-45 T 25-04-2016 IPR003682 rRNA small subunit methyltransferase G GO:0005737|GO:0006364|GO:0008649 RJP_RS00500 64899e59fff0e6a615025f9031e88892 192 Gene3D G3DSA:3.40.50.150 2 167 6.0E-37 T 25-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RJP_RS00500 64899e59fff0e6a615025f9031e88892 192 PIRSF PIRSF003078 1 188 4.6E-39 T 25-04-2016 IPR003682 rRNA small subunit methyltransferase G GO:0005737|GO:0006364|GO:0008649 RJP_RS00500 64899e59fff0e6a615025f9031e88892 192 Pfam PF02527 rRNA small subunit methyltransferase G 9 180 2.5E-50 T 25-04-2016 IPR003682 rRNA small subunit methyltransferase G GO:0005737|GO:0006364|GO:0008649 RJP_RS01200 d1a2709e87e972f80a1f8e8a18e48a03 400 Gene3D G3DSA:3.80.30.20 22 256 2.8E-29 T 25-04-2016 IPR023404 Radical SAM, alpha/beta horseshoe RJP_RS01200 d1a2709e87e972f80a1f8e8a18e48a03 400 PANTHER PTHR13932:SF5 6 400 7.4E-148 T 25-04-2016 RJP_RS01200 d1a2709e87e972f80a1f8e8a18e48a03 400 SUPERFAMILY SSF102114 13 399 4.71E-96 T 25-04-2016 RJP_RS01200 d1a2709e87e972f80a1f8e8a18e48a03 400 SMART SM00729 21 240 1.4E-49 T 25-04-2016 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 RJP_RS01200 d1a2709e87e972f80a1f8e8a18e48a03 400 Pfam PF06969 HemN C-terminal domain 324 388 5.6E-15 T 25-04-2016 IPR010723 HemN, C-terminal RJP_RS01200 d1a2709e87e972f80a1f8e8a18e48a03 400 TIGRFAM TIGR00539 hemN_rel: putative oxygen-independent coproporphyrinogen III oxidase 23 370 5.1E-86 T 25-04-2016 IPR004559 Coproporphyrinogen III oxidase, oxygen-independent related GO:0004109|GO:0005737|GO:0006779|GO:0055114 KEGG: 00071+1.3.99.-|KEGG: 00280+1.3.99.-|KEGG: 00281+1.3.99.-|KEGG: 00362+1.3.99.-|KEGG: 00626+1.3.99.-|KEGG: 00930+1.3.99.- RJP_RS01200 d1a2709e87e972f80a1f8e8a18e48a03 400 PANTHER PTHR13932 6 400 7.4E-148 T 25-04-2016 RJP_RS01200 d1a2709e87e972f80a1f8e8a18e48a03 400 Pfam PF04055 Radical SAM superfamily 26 194 2.6E-18 T 25-04-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 RJP_RS01725 09c3071b8908b00a2121cc2d2fab325b 161 PANTHER PTHR11839 13 161 7.9E-35 T 25-04-2016 RJP_RS01725 09c3071b8908b00a2121cc2d2fab325b 161 ProSitePatterns PS00893 Nudix box signature. 46 67 - T 25-04-2016 IPR020084 NUDIX hydrolase, conserved site GO:0016787 RJP_RS01725 09c3071b8908b00a2121cc2d2fab325b 161 Pfam PF00293 NUDIX domain 13 150 1.7E-23 T 25-04-2016 IPR000086 NUDIX hydrolase domain GO:0016787 RJP_RS01725 09c3071b8908b00a2121cc2d2fab325b 161 SUPERFAMILY SSF55811 9 157 5.01E-29 T 25-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 RJP_RS01725 09c3071b8908b00a2121cc2d2fab325b 161 Gene3D G3DSA:3.90.79.10 11 156 4.5E-30 T 25-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 RJP_RS01725 09c3071b8908b00a2121cc2d2fab325b 161 PANTHER PTHR11839:SF8 13 161 7.9E-35 T 25-04-2016 RJP_RS01725 09c3071b8908b00a2121cc2d2fab325b 161 Hamap MF_00298 RNA pyrophosphohydrolase [rppH]. 7 161 34.727 T 25-04-2016 IPR022927 RNA pyrophosphohydrolase RppH RJP_RS05985 8b48c5a6b67fe3792ebb1e1ef296822f 413 SUPERFAMILY SSF103473 1 412 1.19E-45 T 25-04-2016 IPR020846 Major facilitator superfamily domain RJP_RS05985 8b48c5a6b67fe3792ebb1e1ef296822f 413 Pfam PF07690 Major Facilitator Superfamily 14 359 3.2E-25 T 25-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 RJP_RS05985 8b48c5a6b67fe3792ebb1e1ef296822f 413 Gene3D G3DSA:1.20.1250.20 227 409 9.5E-6 T 25-04-2016 RJP_RS05985 8b48c5a6b67fe3792ebb1e1ef296822f 413 Gene3D G3DSA:1.20.1250.20 9 211 1.7E-18 T 25-04-2016 RJP_RS05985 8b48c5a6b67fe3792ebb1e1ef296822f 413 ProSitePatterns PS00217 Sugar transport proteins signature 2. 120 145 - T 25-04-2016 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 RJP_RS05985 8b48c5a6b67fe3792ebb1e1ef296822f 413 PANTHER PTHR23508 5 413 3.3E-77 T 25-04-2016 RJP_RS02595 c9b0b47faf13293289c3fdeb0a1138e5 90 PANTHER PTHR34477 2 88 2.1E-37 T 25-04-2016 RJP_RS02595 c9b0b47faf13293289c3fdeb0a1138e5 90 Pfam PF01541 GIY-YIG catalytic domain 1 72 7.7E-14 T 25-04-2016 IPR000305 GIY-YIG nuclease superfamily RJP_RS02595 c9b0b47faf13293289c3fdeb0a1138e5 90 SUPERFAMILY SSF82771 1 88 4.58E-18 T 25-04-2016 IPR000305 GIY-YIG nuclease superfamily RJP_RS02595 c9b0b47faf13293289c3fdeb0a1138e5 90 SMART SM00465 1 81 0.0074 T 25-04-2016 IPR000305 GIY-YIG nuclease superfamily RJP_RS02595 c9b0b47faf13293289c3fdeb0a1138e5 90 PANTHER PTHR34477:SF2 2 88 2.1E-37 T 25-04-2016 RJP_RS03420 84250a8efb5c10e7c05633665b0189db 158 PANTHER PTHR37089 10 135 7.8E-12 T 25-04-2016 RJP_RS03420 84250a8efb5c10e7c05633665b0189db 158 SMART SM00972 69 132 2.1E-18 T 25-04-2016 IPR007893 Spore coat protein U RJP_RS03420 84250a8efb5c10e7c05633665b0189db 158 Pfam PF05229 Spore Coat Protein U domain 2 132 5.8E-23 T 25-04-2016 IPR007893 Spore coat protein U RJP_RS02540 76a2660a6e8bd118f78ac917c6953faf 119 SUPERFAMILY SSF48439 4 77 7.59E-9 T 25-04-2016 RJP_RS02540 76a2660a6e8bd118f78ac917c6953faf 119 Gene3D G3DSA:1.25.40.10 4 78 2.2E-9 T 25-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 RJP_RS01145 f2dcc9178cbfac9e4d6fc06437e21807 243 PANTHER PTHR30027:SF3 1 242 1.5E-56 T 25-04-2016 RJP_RS01145 f2dcc9178cbfac9e4d6fc06437e21807 243 PIRSF PIRSF015601 2 239 4.6E-68 T 25-04-2016 IPR006700 Ribosomal RNA small subunit methyltransferase E GO:0006364|GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 RJP_RS01145 f2dcc9178cbfac9e4d6fc06437e21807 243 Gene3D G3DSA:2.40.240.20 1 71 4.7E-22 T 25-04-2016 RJP_RS01145 f2dcc9178cbfac9e4d6fc06437e21807 243 TIGRFAM TIGR00046 TIGR00046: RNA methyltransferase, RsmE family 3 233 1.3E-48 T 25-04-2016 IPR006700 Ribosomal RNA small subunit methyltransferase E GO:0006364|GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 RJP_RS01145 f2dcc9178cbfac9e4d6fc06437e21807 243 Pfam PF04452 RNA methyltransferase 19 232 1.2E-54 T 25-04-2016 IPR006700 Ribosomal RNA small subunit methyltransferase E GO:0006364|GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 RJP_RS01145 f2dcc9178cbfac9e4d6fc06437e21807 243 Gene3D G3DSA:3.40.1280.10 77 235 2.6E-47 T 25-04-2016 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal RJP_RS01145 f2dcc9178cbfac9e4d6fc06437e21807 243 PANTHER PTHR30027 1 242 1.5E-56 T 25-04-2016 RJP_RS01145 f2dcc9178cbfac9e4d6fc06437e21807 243 SUPERFAMILY SSF75217 76 234 4.19E-38 T 25-04-2016 IPR029028 Alpha/beta knot methyltransferases RJP_RS01145 f2dcc9178cbfac9e4d6fc06437e21807 243 SUPERFAMILY SSF88697 3 70 8.2E-16 T 25-04-2016 IPR015947 PUA-like domain RJP_RS05945 563c32068b466123a2bce7d338377874 105 PANTHER PTHR21349 1 103 3.1E-35 T 25-04-2016 RJP_RS05945 563c32068b466123a2bce7d338377874 105 SUPERFAMILY SSF141091 1 102 5.89E-36 T 25-04-2016 IPR028909 Ribosomal protein L21-like GO:0005840 RJP_RS05945 563c32068b466123a2bce7d338377874 105 ProSitePatterns PS01169 Ribosomal protein L21 signature. 73 95 - T 25-04-2016 IPR018258 Ribosomal protein L21, conserved site GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 RJP_RS05945 563c32068b466123a2bce7d338377874 105 Hamap MF_01363 50S ribosomal protein L21 [rplU]. 1 104 25.868 T 25-04-2016 IPR001787 Ribosomal protein L21 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 RJP_RS05945 563c32068b466123a2bce7d338377874 105 Pfam PF00829 Ribosomal prokaryotic L21 protein 1 102 2.7E-37 T 25-04-2016 IPR028909 Ribosomal protein L21-like GO:0005840 RJP_RS05945 563c32068b466123a2bce7d338377874 105 TIGRFAM TIGR00061 L21: ribosomal protein bL21 2 102 1.5E-31 T 25-04-2016 IPR001787 Ribosomal protein L21 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 RJP_RS01305 695e142416b43827474913c2380aeed2 179 SUPERFAMILY SSF47240 9 146 3.18E-12 T 25-04-2016 IPR009078 Ferritin-like superfamily RJP_RS01305 695e142416b43827474913c2380aeed2 179 PANTHER PTHR11237 10 179 1.7E-72 T 25-04-2016 IPR011566 Ubiquinone biosynthesis protein Coq7 GO:0006744|GO:0055114 UniPathway: UPA00232 RJP_RS01305 695e142416b43827474913c2380aeed2 179 Gene3D G3DSA:1.20.1260.10 5 65 4.1E-4 T 25-04-2016 IPR012347 Ferritin-related RJP_RS01305 695e142416b43827474913c2380aeed2 179 Pfam PF03232 Ubiquinone biosynthesis protein COQ7 13 179 1.3E-55 T 25-04-2016 IPR011566 Ubiquinone biosynthesis protein Coq7 GO:0006744|GO:0055114 UniPathway: UPA00232 RJP_RS06195 577f514435524cc2a53a1f34d34ed14f 432 Gene3D G3DSA:1.20.1250.20 239 421 5.3E-12 T 25-04-2016 RJP_RS06195 577f514435524cc2a53a1f34d34ed14f 432 Gene3D G3DSA:1.20.1250.20 18 209 6.6E-8 T 25-04-2016 RJP_RS06195 577f514435524cc2a53a1f34d34ed14f 432 SUPERFAMILY SSF103473 15 424 1.83E-29 T 25-04-2016 IPR020846 Major facilitator superfamily domain RJP_RS06195 577f514435524cc2a53a1f34d34ed14f 432 Pfam PF07690 Major Facilitator Superfamily 21 328 6.3E-17 T 25-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 RJP_RS06195 577f514435524cc2a53a1f34d34ed14f 432 PANTHER PTHR12778 21 424 9.3E-55 T 25-04-2016 RJP_RS00215 5fd8d6a68ea5fdffe8955f56383cf701 100 SUPERFAMILY SSF48613 9 95 2.52E-15 T 25-04-2016 IPR016084 Haem oxygenase-like, multi-helical Reactome: REACT_9431 RJP_RS00215 5fd8d6a68ea5fdffe8955f56383cf701 100 Pfam PF14518 Iron-containing redox enzyme 15 87 6.3E-11 T 25-04-2016 IPR028201 PqqC-like protein RJP_RS00215 5fd8d6a68ea5fdffe8955f56383cf701 100 Gene3D G3DSA:1.20.910.10 6 99 8.2E-17 T 25-04-2016 IPR016084 Haem oxygenase-like, multi-helical Reactome: REACT_9431 RJP_RS01010 69e27ed2c920b909b0200a9d77f56d88 266 PANTHER PTHR13696 9 232 7.3E-15 T 25-04-2016 RJP_RS01010 69e27ed2c920b909b0200a9d77f56d88 266 SUPERFAMILY SSF52540 6 232 2.41E-24 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RJP_RS01010 69e27ed2c920b909b0200a9d77f56d88 266 PANTHER PTHR13696:SF54 9 232 7.3E-15 T 25-04-2016 RJP_RS01010 69e27ed2c920b909b0200a9d77f56d88 266 Pfam PF09140 ATPase MipZ 9 260 5.5E-86 T 25-04-2016 IPR015223 ATPase MipZ RJP_RS01010 69e27ed2c920b909b0200a9d77f56d88 266 Gene3D G3DSA:3.40.50.300 9 249 5.0E-23 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RJP_RS03145 40648afca0b34266ca347815792d51c8 152 SUPERFAMILY SSF74982 5 132 5.62E-47 T 25-04-2016 IPR023620 Small protein B RJP_RS03145 40648afca0b34266ca347815792d51c8 152 TIGRFAM TIGR00086 smpB: SsrA-binding protein 7 149 9.4E-56 T 25-04-2016 IPR000037 SsrA-binding protein GO:0003723 RJP_RS03145 40648afca0b34266ca347815792d51c8 152 Pfam PF01668 SmpB protein 7 71 6.0E-27 T 25-04-2016 IPR000037 SsrA-binding protein GO:0003723 RJP_RS03145 40648afca0b34266ca347815792d51c8 152 PANTHER PTHR30308 6 151 6.4E-72 T 25-04-2016 RJP_RS03145 40648afca0b34266ca347815792d51c8 152 Gene3D G3DSA:2.40.280.10 6 127 2.1E-48 T 25-04-2016 IPR023620 Small protein B RJP_RS03145 40648afca0b34266ca347815792d51c8 152 PANTHER PTHR30308:SF2 6 151 6.4E-72 T 25-04-2016 RJP_RS03145 40648afca0b34266ca347815792d51c8 152 ProDom PD004488 SSRA-BINDING RNA-BINDING SMPB SMALL B TMRNA-BINDING SSRA 3D-STRUCTURE HOMOLOG BINDING 8 132 5.0E-57 T 25-04-2016 IPR000037 SsrA-binding protein GO:0003723 RJP_RS03145 40648afca0b34266ca347815792d51c8 152 Hamap MF_00023 SsrA-binding protein [smpB]. 1 152 68.555 T 25-04-2016 IPR000037 SsrA-binding protein GO:0003723 RJP_RS03145 40648afca0b34266ca347815792d51c8 152 ProSitePatterns PS01317 SsrA-binding protein. 26 38 - T 25-04-2016 IPR020081 SsrA-binding protein, conserved site RJP_RS02365 4635c6292d6c9fa6065eb45408adcf72 44 Pfam PF01371 Trp repressor protein 4 41 5.6E-5 T 25-04-2016 IPR000831 Trp repressor GO:0003700|GO:0005622|GO:0006355 RJP_RS03480 a3aaac75557f375b8b722d89190f5cee 169 TIGRFAM TIGR01045 RPE1: rickettsial palindromic element RPE1 domain 1 33 2.4E-12 T 25-04-2016 IPR005728 Rickettsial palindromic element RJP_RS03480 a3aaac75557f375b8b722d89190f5cee 169 Pfam PF03968 OstA-like protein 58 164 2.8E-10 T 25-04-2016 IPR005653 Organic solvent tolerance-like, N-terminal RJP_RS03480 a3aaac75557f375b8b722d89190f5cee 169 Gene3D G3DSA:2.60.450.10 55 164 2.6E-17 T 25-04-2016 RJP_RS00525 e8a253336521bf5deba5f1b15006814a 274 Pfam PF00793 DAHP synthetase I family 8 272 1.3E-83 T 25-04-2016 IPR006218 DAHP synthetase I/KDSA GO:0009058 KEGG: 00540+2.5.1.55|MetaCyc: PWY-1269|MetaCyc: PWY-7674|UniPathway: UPA00030|UniPathway: UPA00357 RJP_RS00525 e8a253336521bf5deba5f1b15006814a 274 Hamap MF_00056 2-dehydro-3-deoxyphosphooctonate aldolase [kdsA]. 12 274 52.571 T 25-04-2016 IPR006269 3-deoxy-8-phosphooctulonate synthase GO:0005737|GO:0008152|GO:0008676 KEGG: 00540+2.5.1.55|MetaCyc: PWY-1269|MetaCyc: PWY-7674|UniPathway: UPA00030|UniPathway: UPA00357 RJP_RS00525 e8a253336521bf5deba5f1b15006814a 274 PANTHER PTHR21057 3 274 4.6E-148 T 25-04-2016 RJP_RS00525 e8a253336521bf5deba5f1b15006814a 274 TIGRFAM TIGR01362 KDO8P_synth: 3-deoxy-8-phosphooctulonate synthase 17 273 8.9E-129 T 25-04-2016 IPR006269 3-deoxy-8-phosphooctulonate synthase GO:0005737|GO:0008152|GO:0008676 KEGG: 00540+2.5.1.55|MetaCyc: PWY-1269|MetaCyc: PWY-7674|UniPathway: UPA00030|UniPathway: UPA00357 RJP_RS00525 e8a253336521bf5deba5f1b15006814a 274 SUPERFAMILY SSF51569 2 273 2.93E-101 T 25-04-2016 RJP_RS00525 e8a253336521bf5deba5f1b15006814a 274 Gene3D G3DSA:3.20.20.70 17 273 2.0E-108 T 25-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 RJP_RS00525 e8a253336521bf5deba5f1b15006814a 274 PANTHER PTHR21057:SF2 3 274 4.6E-148 T 25-04-2016 IPR006269 3-deoxy-8-phosphooctulonate synthase GO:0005737|GO:0008152|GO:0008676 KEGG: 00540+2.5.1.55|MetaCyc: PWY-1269|MetaCyc: PWY-7674|UniPathway: UPA00030|UniPathway: UPA00357 RJP_RS06495 a8c783b4d1c5e35ef299870f4375b959 744 SMART SM00843 678 744 2.0E-31 T 25-04-2016 IPR018541 FtsK gamma domain RJP_RS06495 a8c783b4d1c5e35ef299870f4375b959 744 Pfam PF13491 4TM region of DNA translocase FtsK/SpoIIIE 14 165 1.9E-23 T 25-04-2016 IPR025199 DNA translocase FtsK, 4TM region RJP_RS06495 a8c783b4d1c5e35ef299870f4375b959 744 Pfam PF01580 FtsK/SpoIIIE family 360 579 1.0E-66 T 25-04-2016 IPR002543 FtsK domain GO:0000166|GO:0003677|GO:0005524 RJP_RS06495 a8c783b4d1c5e35ef299870f4375b959 744 PANTHER PTHR22683 246 744 1.8E-224 T 25-04-2016 RJP_RS06495 a8c783b4d1c5e35ef299870f4375b959 744 SUPERFAMILY SSF52540 340 648 2.05E-45 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RJP_RS06495 a8c783b4d1c5e35ef299870f4375b959 744 PANTHER PTHR22683:SF41 246 744 1.8E-224 T 25-04-2016 RJP_RS06495 a8c783b4d1c5e35ef299870f4375b959 744 SUPERFAMILY SSF46785 680 742 6.26E-19 T 25-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RJP_RS06495 a8c783b4d1c5e35ef299870f4375b959 744 Gene3D G3DSA:3.40.50.300 532 643 1.5E-88 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RJP_RS06495 a8c783b4d1c5e35ef299870f4375b959 744 Gene3D G3DSA:3.40.50.300 337 500 1.5E-88 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RJP_RS06495 a8c783b4d1c5e35ef299870f4375b959 744 Pfam PF09397 Ftsk gamma domain 682 741 8.3E-24 T 25-04-2016 IPR018541 FtsK gamma domain RJP_RS06495 a8c783b4d1c5e35ef299870f4375b959 744 SMART SM00382 395 600 0.0039 T 25-04-2016 IPR003593 AAA+ ATPase domain RJP_RS05100 7a2cc65017cf28a7e3d239113e8b3df7 92 Pfam PF01649 Ribosomal protein S20 2 84 5.5E-22 T 25-04-2016 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 RJP_RS05100 7a2cc65017cf28a7e3d239113e8b3df7 92 SUPERFAMILY SSF46992 3 86 7.98E-24 T 25-04-2016 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 RJP_RS05100 7a2cc65017cf28a7e3d239113e8b3df7 92 Hamap MF_00500 30S ribosomal protein S20 [rpsT]. 1 85 14.098 T 25-04-2016 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 RJP_RS05100 7a2cc65017cf28a7e3d239113e8b3df7 92 PANTHER PTHR33398 1 88 1.5E-20 T 25-04-2016 RJP_RS05100 7a2cc65017cf28a7e3d239113e8b3df7 92 Gene3D G3DSA:1.20.58.110 1 87 1.5E-25 T 25-04-2016 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 RJP_RS05100 7a2cc65017cf28a7e3d239113e8b3df7 92 ProDom PD004231 RIBOSOMAL S20 30S RRNA-BINDING RNA-BINDING RIBONUCLEOPROTEIN S20P SUBUNIT CHLOROPLAST DIRECT 12 87 2.0E-34 T 25-04-2016 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 RJP_RS05100 7a2cc65017cf28a7e3d239113e8b3df7 92 TIGRFAM TIGR00029 S20: ribosomal protein bS20 1 86 5.8E-21 T 25-04-2016 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 RJP_RS05300 f1527c31a273017b127ca7f760e579a8 354 Gene3D G3DSA:1.20.1250.20 6 142 4.9E-8 T 25-04-2016 RJP_RS05300 f1527c31a273017b127ca7f760e579a8 354 Pfam PF07690 Major Facilitator Superfamily 6 285 4.0E-15 T 25-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 RJP_RS05300 f1527c31a273017b127ca7f760e579a8 354 Gene3D G3DSA:1.20.1250.20 170 349 1.7E-15 T 25-04-2016 RJP_RS05300 f1527c31a273017b127ca7f760e579a8 354 SUPERFAMILY SSF103473 6 350 7.32E-27 T 25-04-2016 IPR020846 Major facilitator superfamily domain RJP_RS05300 f1527c31a273017b127ca7f760e579a8 354 PANTHER PTHR12778 7 345 2.9E-23 T 25-04-2016 RJP_RS04090 3603af38048e5807ec0a1cc12bcb9803 290 Pfam PF06691 Protein of unknown function (DUF1189) 17 277 1.8E-14 T 25-04-2016 IPR009574 Protein of unknown function DUF1189 RJP_RS04090 3603af38048e5807ec0a1cc12bcb9803 290 ProDom PD205440 TRANSMEMBRANE MEMBRANE RP489 1 288 1.0E-135 T 25-04-2016 RJP_RS06115 6b606fb543157f2c3449df010a4cf5d7 155 PRINTS PR01021 OMPA domain signature 98 114 3.97E-15 T 25-04-2016 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 RJP_RS06115 6b606fb543157f2c3449df010a4cf5d7 155 PRINTS PR01021 OMPA domain signature 53 75 3.97E-15 T 25-04-2016 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 RJP_RS06115 6b606fb543157f2c3449df010a4cf5d7 155 PRINTS PR01021 OMPA domain signature 83 98 3.97E-15 T 25-04-2016 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 RJP_RS06115 6b606fb543157f2c3449df010a4cf5d7 155 PANTHER PTHR30128 20 154 3.2E-45 T 25-04-2016 RJP_RS06115 6b606fb543157f2c3449df010a4cf5d7 155 PANTHER PTHR30128:SF18 20 154 3.2E-45 T 25-04-2016 RJP_RS06115 6b606fb543157f2c3449df010a4cf5d7 155 Gene3D G3DSA:3.30.1330.60 49 152 1.1E-31 T 25-04-2016 IPR006665 OmpA-like domain RJP_RS06115 6b606fb543157f2c3449df010a4cf5d7 155 Pfam PF00691 OmpA family 53 147 7.2E-22 T 25-04-2016 IPR006665 OmpA-like domain RJP_RS06115 6b606fb543157f2c3449df010a4cf5d7 155 SUPERFAMILY SSF103088 44 151 1.7E-32 T 25-04-2016 IPR006665 OmpA-like domain RJP_RS06115 6b606fb543157f2c3449df010a4cf5d7 155 TIGRFAM TIGR02802 Pal_lipo: peptidoglycan-associated lipoprotein 51 152 1.3E-40 T 25-04-2016 IPR014169 Peptidoglycan-associated lipoprotein GO:0009279 RJP_RS05205 96fd36d025392e3a1d8158d435c9eb82 119 PANTHER PTHR13501 11 115 1.1E-40 T 25-04-2016 IPR005727 Ribosomal protein L22, bacterial/chloroplast-type GO:0003735|GO:0006412|GO:0015934 RJP_RS05205 96fd36d025392e3a1d8158d435c9eb82 119 ProSitePatterns PS00464 Ribosomal protein L22 signature. 89 113 - T 25-04-2016 IPR018260 Ribosomal protein L22/L17, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 RJP_RS05205 96fd36d025392e3a1d8158d435c9eb82 119 Gene3D G3DSA:3.90.470.10 9 117 6.5E-38 T 25-04-2016 IPR001063 Ribosomal protein L22/L17 GO:0003735|GO:0005840|GO:0006412 RJP_RS05205 96fd36d025392e3a1d8158d435c9eb82 119 Pfam PF00237 Ribosomal protein L22p/L17e 14 113 5.0E-29 T 25-04-2016 IPR001063 Ribosomal protein L22/L17 GO:0003735|GO:0005840|GO:0006412 RJP_RS05205 96fd36d025392e3a1d8158d435c9eb82 119 TIGRFAM TIGR01044 rplV_bact: ribosomal protein uL22 11 113 5.6E-31 T 25-04-2016 IPR005727 Ribosomal protein L22, bacterial/chloroplast-type GO:0003735|GO:0006412|GO:0015934 RJP_RS05205 96fd36d025392e3a1d8158d435c9eb82 119 Hamap MF_01331_B 50S ribosomal protein L22 [rplV]. 7 116 23.669 T 25-04-2016 IPR005727 Ribosomal protein L22, bacterial/chloroplast-type GO:0003735|GO:0006412|GO:0015934 RJP_RS05205 96fd36d025392e3a1d8158d435c9eb82 119 SUPERFAMILY SSF54843 5 118 2.62E-40 T 25-04-2016 IPR001063 Ribosomal protein L22/L17 GO:0003735|GO:0005840|GO:0006412 RJP_RS00670 3720886e1016b44794a582aac788813e 218 Pfam PF04028 Domain of unknown function (DUF374) 74 137 6.3E-21 T 25-04-2016 IPR007172 Domain of unknown function DUF374 RJP_RS00670 3720886e1016b44794a582aac788813e 218 ProDom PD032436 LIPOPROTEIN UNCHARACTERIZED PROBABLE CJ0457C SIMILAR TRANSFERASE BACTERIA PRECURSOR SIGNAL CC0304 9 138 3.0E-71 T 25-04-2016 IPR007172 Domain of unknown function DUF374 RJP_RS04765 329b6a6f563d6a495af6356082e8088f 64 SUPERFAMILY SSF48403 1 29 6.89E-6 T 25-04-2016 IPR020683 Ankyrin repeat-containing domain RJP_RS04765 329b6a6f563d6a495af6356082e8088f 64 Gene3D G3DSA:1.25.40.20 1 58 2.7E-6 T 25-04-2016 IPR020683 Ankyrin repeat-containing domain RJP_RS04855 81bbb7e355eead0f9cfdba176d866fba 118 SUPERFAMILY SSF54211 4 116 1.31E-16 T 25-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold RJP_RS04855 81bbb7e355eead0f9cfdba176d866fba 118 ProSitePatterns PS00648 Bacterial ribonuclease P protein component signature. 57 71 - T 25-04-2016 IPR020539 Ribonuclease P, conserved site GO:0004526 RJP_RS04855 81bbb7e355eead0f9cfdba176d866fba 118 Pfam PF00825 Ribonuclease P 5 115 2.2E-18 T 25-04-2016 IPR000100 Ribonuclease P GO:0000049|GO:0004526|GO:0008033 RJP_RS04855 81bbb7e355eead0f9cfdba176d866fba 118 Hamap MF_00227 Ribonuclease P protein component [rnpA]. 1 116 11.222 T 25-04-2016 IPR000100 Ribonuclease P GO:0000049|GO:0004526|GO:0008033 RJP_RS04855 81bbb7e355eead0f9cfdba176d866fba 118 Gene3D G3DSA:3.30.230.10 5 114 1.6E-20 T 25-04-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup RJP_RS04855 81bbb7e355eead0f9cfdba176d866fba 118 TIGRFAM TIGR00188 rnpA: ribonuclease P protein component 4 116 9.2E-15 T 25-04-2016 IPR000100 Ribonuclease P GO:0000049|GO:0004526|GO:0008033 RJP_RS06225 964dda23a369a94ffc2b087e6171a880 237 Gene3D G3DSA:2.40.160.20 22 234 4.5E-15 T 25-04-2016 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 RJP_RS06225 964dda23a369a94ffc2b087e6171a880 237 SUPERFAMILY SSF56925 22 234 1.12E-15 T 25-04-2016 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 RJP_RS06225 964dda23a369a94ffc2b087e6171a880 237 ProDom PD052653 PRECURSOR RP787 SIGNAL 1 54 1.0E-13 T 25-04-2016 RJP_RS02655 496405b51c5a165f0a0f94eae035fab9 387 ProDom PD210175 RP364 RP363 75 219 3.0E-65 T 25-04-2016 IPR020168 Uncharacterised protein family RP364 RJP_RS04210 8417e93b2b70ac319a84f221a7710f62 104 ProDom PD199129 RP547 1 104 2.0E-53 T 25-04-2016 RJP_RS05000 4d5965320262825a19d020a81c947222 93 PANTHER PTHR30546:SF0 9 81 1.9E-13 T 25-04-2016 RJP_RS05000 4d5965320262825a19d020a81c947222 93 Pfam PF03358 NADPH-dependent FMN reductase 18 74 1.9E-8 T 25-04-2016 IPR005025 NADPH-dependent FMN reductase-like GO:0016491 RJP_RS05000 4d5965320262825a19d020a81c947222 93 SUPERFAMILY SSF52218 14 85 8.93E-19 T 25-04-2016 IPR029039 Flavoprotein-like domain RJP_RS05000 4d5965320262825a19d020a81c947222 93 Gene3D G3DSA:3.40.50.360 14 83 2.5E-22 T 25-04-2016 IPR029039 Flavoprotein-like domain RJP_RS05000 4d5965320262825a19d020a81c947222 93 PANTHER PTHR30546 9 81 1.9E-13 T 25-04-2016 RJP_RS03620 1130ef1bf4a44306065c9050afccdcef 109 Pfam PF10097 Predicted membrane protein (DUF2335) 41 89 1.2E-17 T 25-04-2016 IPR019284 Xylella phage Xfas53, Orf42 RJP_RS04585 8b954f076e12f34452fbed3057b714f1 419 Hamap MF_00111 UDP-N-acetylglucosamine 1-carboxyvinyltransferase [murA]. 1 419 43.631 T 25-04-2016 IPR005750 UDP-N-acetylglucosamine 1-carboxyvinyltransferase GO:0008760|GO:0019277 KEGG: 00520+2.5.1.7|KEGG: 00550+2.5.1.7|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 RJP_RS04585 8b954f076e12f34452fbed3057b714f1 419 SUPERFAMILY SSF55205 1 418 3.27E-125 T 25-04-2016 IPR013792 RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta GO:0003824 RJP_RS04585 8b954f076e12f34452fbed3057b714f1 419 Gene3D G3DSA:3.65.10.10 224 418 2.5E-50 T 25-04-2016 IPR001986 Enolpyruvate transferase domain GO:0016765 RJP_RS04585 8b954f076e12f34452fbed3057b714f1 419 Pfam PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) 7 409 2.4E-91 T 25-04-2016 IPR001986 Enolpyruvate transferase domain GO:0016765 RJP_RS04585 8b954f076e12f34452fbed3057b714f1 419 PANTHER PTHR21090 1 419 5.3E-166 T 25-04-2016 RJP_RS04585 8b954f076e12f34452fbed3057b714f1 419 Gene3D G3DSA:3.65.10.10 21 223 6.2E-58 T 25-04-2016 IPR001986 Enolpyruvate transferase domain GO:0016765 RJP_RS04585 8b954f076e12f34452fbed3057b714f1 419 TIGRFAM TIGR01072 murA: UDP-N-acetylglucosamine 1-carboxyvinyltransferase 1 418 1.0E-175 T 25-04-2016 IPR005750 UDP-N-acetylglucosamine 1-carboxyvinyltransferase GO:0008760|GO:0019277 KEGG: 00520+2.5.1.7|KEGG: 00550+2.5.1.7|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 RJP_RS04130 1f1ca7f3888b7e5f74c5e486c3bedf56 458 Hamap MF_00445 NAD(P)H-quinone oxidoreductase subunit 2, chloroplastic [ndhB]. 18 456 14.801 T 25-04-2016 IPR010096 NAD(P)H-quinone oxidoreductase, subunit N/subunit 2 GO:0008137|GO:0042773|GO:0055114 RJP_RS04130 1f1ca7f3888b7e5f74c5e486c3bedf56 458 PANTHER PTHR22773:SF41 4 458 2.3E-99 T 25-04-2016 RJP_RS04130 1f1ca7f3888b7e5f74c5e486c3bedf56 458 Pfam PF00361 Proton-conducting membrane transporter 115 408 4.4E-60 T 25-04-2016 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit Reactome: REACT_6305 RJP_RS04130 1f1ca7f3888b7e5f74c5e486c3bedf56 458 PANTHER PTHR22773 4 458 2.3E-99 T 25-04-2016 RJP_RS04130 1f1ca7f3888b7e5f74c5e486c3bedf56 458 TIGRFAM TIGR01770 NDH_I_N: proton-translocating NADH-quinone oxidoreductase, chain N 2 456 6.2E-137 T 25-04-2016 IPR010096 NAD(P)H-quinone oxidoreductase, subunit N/subunit 2 GO:0008137|GO:0042773|GO:0055114 RJP_RS02870 6a524cf64a57ea6d6bc6d88cf03e9ba2 320 TIGRFAM TIGR01045 RPE1: rickettsial palindromic element RPE1 domain 13 47 5.6E-13 T 25-04-2016 IPR005728 Rickettsial palindromic element RJP_RS02870 6a524cf64a57ea6d6bc6d88cf03e9ba2 320 PANTHER PTHR34183:SF1 144 262 3.8E-43 T 25-04-2016 RJP_RS02870 6a524cf64a57ea6d6bc6d88cf03e9ba2 320 TIGRFAM TIGR00413 rlpA: rare lipoprotein A 169 304 2.3E-40 T 25-04-2016 IPR012997 Rare lipoprotein A RJP_RS02870 6a524cf64a57ea6d6bc6d88cf03e9ba2 320 PANTHER PTHR34183 144 262 3.8E-43 T 25-04-2016 RJP_RS02870 6a524cf64a57ea6d6bc6d88cf03e9ba2 320 SUPERFAMILY SSF50685 169 262 2.51E-10 T 25-04-2016 IPR009009 RlpA-like protein, double-psi beta-barrel domain RJP_RS02870 6a524cf64a57ea6d6bc6d88cf03e9ba2 320 Pfam PF03330 Lytic transglycolase 166 259 3.7E-24 T 25-04-2016 IPR009009 RlpA-like protein, double-psi beta-barrel domain RJP_RS02870 6a524cf64a57ea6d6bc6d88cf03e9ba2 320 TIGRFAM TIGR03776 RPE5: rickettsial palindromic element RPE5 domain 47 84 4.5E-11 T 25-04-2016 IPR022438 Rickettsia palindromic element RPE5 RJP_RS03535 8ecaa3ab4f8924a5b96d715354032c3f 240 Pfam PF02578 Multi-copper polyphenol oxidoreductase laccase 33 222 1.1E-45 T 25-04-2016 IPR003730 Multi-copper polyphenol oxidoreductase, laccase RJP_RS03535 8ecaa3ab4f8924a5b96d715354032c3f 240 Gene3D G3DSA:3.60.140.10 33 239 4.8E-60 T 25-04-2016 IPR003730 Multi-copper polyphenol oxidoreductase, laccase RJP_RS03535 8ecaa3ab4f8924a5b96d715354032c3f 240 PANTHER PTHR30616 51 221 1.8E-44 T 25-04-2016 RJP_RS03535 8ecaa3ab4f8924a5b96d715354032c3f 240 SUPERFAMILY SSF64438 7 239 1.39E-58 T 25-04-2016 IPR011324 Cytotoxic necrotizing factor-like, catalytic RJP_RS03535 8ecaa3ab4f8924a5b96d715354032c3f 240 TIGRFAM TIGR00726 TIGR00726: YfiH family protein 18 240 3.8E-71 T 25-04-2016 IPR003730 Multi-copper polyphenol oxidoreductase, laccase RJP_RS03060 ca893643f7401934d18219a552436356 177 Pfam PF12784 PD-(D/E)XK nuclease family transposase 4 130 1.9E-23 T 25-04-2016 RJP_RS03060 ca893643f7401934d18219a552436356 177 TIGRFAM TIGR01784 T_den_put_tspse: conserved hypothetical protein 4 176 2.4E-17 T 25-04-2016 IPR010106 Conserved hypothetical protein CHP01784 RJP_RS01855 ea7ea9af3003ccdeba9abafee71b33d7 275 Gene3D G3DSA:3.60.10.10 1 260 2.1E-64 T 25-04-2016 IPR005135 Endonuclease/exonuclease/phosphatase RJP_RS01855 ea7ea9af3003ccdeba9abafee71b33d7 275 TIGRFAM TIGR00633 xth: exodeoxyribonuclease III (xth) 1 260 8.8E-57 T 25-04-2016 IPR004808 AP endonuclease 1 GO:0004518|GO:0006281 RJP_RS01855 ea7ea9af3003ccdeba9abafee71b33d7 275 SUPERFAMILY SSF56219 1 261 3.93E-66 T 25-04-2016 IPR005135 Endonuclease/exonuclease/phosphatase RJP_RS01855 ea7ea9af3003ccdeba9abafee71b33d7 275 ProSitePatterns PS00726 AP endonucleases family 1 signature 1. 27 36 - T 25-04-2016 IPR020847 AP endonuclease 1, binding site GO:0003677|GO:0004519|GO:0005622|GO:0006281 RJP_RS01855 ea7ea9af3003ccdeba9abafee71b33d7 275 PANTHER PTHR22748:SF7 1 263 2.0E-81 T 25-04-2016 RJP_RS01855 ea7ea9af3003ccdeba9abafee71b33d7 275 PANTHER PTHR22748 1 263 2.0E-81 T 25-04-2016 IPR004808 AP endonuclease 1 GO:0004518|GO:0006281 RJP_RS01855 ea7ea9af3003ccdeba9abafee71b33d7 275 Pfam PF03372 Endonuclease/Exonuclease/phosphatase family 4 252 2.0E-23 T 25-04-2016 IPR005135 Endonuclease/exonuclease/phosphatase RJP_RS01855 ea7ea9af3003ccdeba9abafee71b33d7 275 TIGRFAM TIGR00195 exoDNase_III: exodeoxyribonuclease III 1 259 3.9E-60 T 25-04-2016 RJP_RS02280 a2ad7fd77e4efc1cd05322fd9e977518 143 TIGRFAM TIGR02801 tolR: protein TolR 17 136 2.8E-39 T 25-04-2016 IPR014168 Biopolymer transport, TolR GO:0015031|GO:0016021 RJP_RS02280 a2ad7fd77e4efc1cd05322fd9e977518 143 PANTHER PTHR30558 1 137 6.7E-35 T 25-04-2016 RJP_RS02280 a2ad7fd77e4efc1cd05322fd9e977518 143 Pfam PF02472 Biopolymer transport protein ExbD/TolR 18 135 1.7E-28 T 25-04-2016 IPR003400 Biopolymer transport protein ExbD/TolR GO:0005215|GO:0006810|GO:0016020 RJP_RS02280 a2ad7fd77e4efc1cd05322fd9e977518 143 PANTHER PTHR30558:SF7 1 137 6.7E-35 T 25-04-2016 RJP_RS03930 3d858aa8235ccbeddc4f70d8dcb1de22 146 Pfam PF10116 Protein required for attachment to host cells 9 143 5.2E-25 T 25-04-2016 IPR019291 Host attachment protein RJP_RS04335 6590b1c5ef40be2509b4fad431683554 144 PANTHER PTHR23309 4 144 4.5E-35 T 25-04-2016 RJP_RS04335 6590b1c5ef40be2509b4fad431683554 144 Gene3D G3DSA:3.40.50.720 3 144 5.0E-25 T 25-04-2016 IPR016040 NAD(P)-binding domain RJP_RS04335 6590b1c5ef40be2509b4fad431683554 144 PANTHER PTHR23309:SF2 4 144 4.5E-35 T 25-04-2016 RJP_RS04335 6590b1c5ef40be2509b4fad431683554 144 SUPERFAMILY SSF51735 4 144 1.62E-33 T 25-04-2016 IPR016040 NAD(P)-binding domain RJP_RS04335 6590b1c5ef40be2509b4fad431683554 144 Pfam PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain 7 143 2.2E-30 T 25-04-2016 IPR006176 3-hydroxyacyl-CoA dehydrogenase, NAD binding GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7726|UniPathway: UPA00659 RJP_RS00755 09f27f40c6abc571c4ec249005404d09 78 Pfam PF01197 Ribosomal protein L31 1 66 7.5E-14 T 25-04-2016 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RJP_RS00755 09f27f40c6abc571c4ec249005404d09 78 SUPERFAMILY SSF143800 1 70 9.42E-12 T 25-04-2016 RJP_RS00755 09f27f40c6abc571c4ec249005404d09 78 TIGRFAM TIGR00105 L31: ribosomal protein bL31 1 68 7.7E-11 T 25-04-2016 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RJP_RS00755 09f27f40c6abc571c4ec249005404d09 78 ProSitePatterns PS01143 Ribosomal protein L31 signature. 35 57 - T 25-04-2016 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RJP_RS05085 9c3942d1562aa0eafa122df1d2319701 73 Gene3D G3DSA:1.20.1250.20 6 69 1.1E-5 T 25-04-2016 RJP_RS05085 9c3942d1562aa0eafa122df1d2319701 73 SUPERFAMILY SSF103473 3 69 4.84E-7 T 25-04-2016 IPR020846 Major facilitator superfamily domain RJP_RS04620 9c3942d1562aa0eafa122df1d2319701 73 Gene3D G3DSA:1.20.1250.20 6 69 1.1E-5 T 25-04-2016 RJP_RS04620 9c3942d1562aa0eafa122df1d2319701 73 SUPERFAMILY SSF103473 3 69 4.84E-7 T 25-04-2016 IPR020846 Major facilitator superfamily domain RJP_RS01860 c3d6c5d84cbefda9609c7f173c7fec89 326 TIGRFAM TIGR03182 PDH_E1_alph_y: pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit 12 325 9.4E-148 T 25-04-2016 IPR017597 Pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit, subgroup y GO:0004739|GO:0006086|GO:0043231 KEGG: 00010+1.2.4.1|KEGG: 00020+1.2.4.1|KEGG: 00620+1.2.4.1 RJP_RS01860 c3d6c5d84cbefda9609c7f173c7fec89 326 PANTHER PTHR11516:SF40 11 326 6.7E-148 T 25-04-2016 RJP_RS01860 c3d6c5d84cbefda9609c7f173c7fec89 326 PANTHER PTHR11516 11 326 6.7E-148 T 25-04-2016 RJP_RS01860 c3d6c5d84cbefda9609c7f173c7fec89 326 SUPERFAMILY SSF52518 7 326 7.61E-101 T 25-04-2016 IPR029061 Thiamin diphosphate-binding fold RJP_RS01860 c3d6c5d84cbefda9609c7f173c7fec89 326 Pfam PF00676 Dehydrogenase E1 component 21 315 1.8E-92 T 25-04-2016 IPR001017 Dehydrogenase, E1 component GO:0008152|GO:0016624 RJP_RS01860 c3d6c5d84cbefda9609c7f173c7fec89 326 Gene3D G3DSA:3.40.50.970 9 325 4.5E-123 T 25-04-2016 IPR029061 Thiamin diphosphate-binding fold RJP_RS01525 d96379649b32b0d492ece05b15c68a47 184 SMART SM00248 142 171 0.2 T 25-04-2016 IPR002110 Ankyrin repeat GO:0005515 RJP_RS01525 d96379649b32b0d492ece05b15c68a47 184 SMART SM00248 71 101 600.0 T 25-04-2016 IPR002110 Ankyrin repeat GO:0005515 RJP_RS01525 d96379649b32b0d492ece05b15c68a47 184 SMART SM00248 109 138 3.3 T 25-04-2016 IPR002110 Ankyrin repeat GO:0005515 RJP_RS01525 d96379649b32b0d492ece05b15c68a47 184 Gene3D G3DSA:1.25.40.20 124 180 1.4E-13 T 25-04-2016 IPR020683 Ankyrin repeat-containing domain RJP_RS01525 d96379649b32b0d492ece05b15c68a47 184 Gene3D G3DSA:1.25.40.20 64 123 1.8E-6 T 25-04-2016 IPR020683 Ankyrin repeat-containing domain RJP_RS01525 d96379649b32b0d492ece05b15c68a47 184 Pfam PF12796 Ankyrin repeats (3 copies) 79 170 5.4E-10 T 25-04-2016 IPR020683 Ankyrin repeat-containing domain RJP_RS01525 d96379649b32b0d492ece05b15c68a47 184 SUPERFAMILY SSF48403 64 183 5.44E-18 T 25-04-2016 IPR020683 Ankyrin repeat-containing domain RJP_RS00975 4cb51b3c862c592aa35d9af2800da094 239 ProSitePatterns PS01199 Ribosomal protein L1 signature. 129 148 - T 25-04-2016 IPR023673 Ribosomal protein L1, conserved site RJP_RS00975 4cb51b3c862c592aa35d9af2800da094 239 PANTHER PTHR23105:SF5 28 238 9.0E-77 T 25-04-2016 RJP_RS00975 4cb51b3c862c592aa35d9af2800da094 239 Pfam PF00687 Ribosomal protein L1p/L10e family 39 228 2.0E-48 T 25-04-2016 IPR028364 Ribosomal protein L1/ribosomal biogenesis protein RJP_RS00975 4cb51b3c862c592aa35d9af2800da094 239 TIGRFAM TIGR01169 rplA_bact: ribosomal protein uL1 14 237 6.8E-101 T 25-04-2016 IPR005878 Ribosomal protein L1, bacterial-type GO:0003723|GO:0003735|GO:0006412|GO:0015934 RJP_RS00975 4cb51b3c862c592aa35d9af2800da094 239 SUPERFAMILY SSF56808 16 235 6.02E-77 T 25-04-2016 IPR023674 Ribosomal protein L1-like RJP_RS00975 4cb51b3c862c592aa35d9af2800da094 239 Gene3D G3DSA:3.40.50.790 78 168 2.0E-39 T 25-04-2016 IPR016095 Ribosomal protein L1, 3-layer alpha/beta-sandwich RJP_RS00975 4cb51b3c862c592aa35d9af2800da094 239 Hamap MF_01318_B 50S ribosomal protein L1 [rplA]. 4 238 40.726 T 25-04-2016 IPR005878 Ribosomal protein L1, bacterial-type GO:0003723|GO:0003735|GO:0006412|GO:0015934 RJP_RS00975 4cb51b3c862c592aa35d9af2800da094 239 PIRSF PIRSF002155 2 236 2.9E-81 T 25-04-2016 IPR002143 Ribosomal protein L1 GO:0003723|GO:0003735|GO:0006412|GO:0015934 RJP_RS00975 4cb51b3c862c592aa35d9af2800da094 239 Gene3D G3DSA:3.30.190.20 27 77 3.6E-41 T 25-04-2016 IPR016094 Ribosomal protein L1, 2-layer alpha/beta-sandwich GO:0003723 RJP_RS00975 4cb51b3c862c592aa35d9af2800da094 239 Gene3D G3DSA:3.30.190.20 170 235 3.6E-41 T 25-04-2016 IPR016094 Ribosomal protein L1, 2-layer alpha/beta-sandwich GO:0003723 RJP_RS00975 4cb51b3c862c592aa35d9af2800da094 239 PANTHER PTHR23105 28 238 9.0E-77 T 25-04-2016 RJP_RS05835 1906c65a4705846e709c6786e7482e21 499 PANTHER PTHR31187 11 489 1.0E-95 T 25-04-2016 IPR004667 ADP/ATP carrier protein GO:0005471|GO:0005524|GO:0006810|GO:0016021 RJP_RS05835 1906c65a4705846e709c6786e7482e21 499 Pfam PF03219 TLC ATP/ADP transporter 6 495 1.8E-182 T 25-04-2016 IPR004667 ADP/ATP carrier protein GO:0005471|GO:0005524|GO:0006810|GO:0016021 RJP_RS05835 1906c65a4705846e709c6786e7482e21 499 TIGRFAM TIGR00769 AAA: ADP/ATP carrier protein family 20 494 4.7E-122 T 25-04-2016 IPR004667 ADP/ATP carrier protein GO:0005471|GO:0005524|GO:0006810|GO:0016021 RJP_RS02695 d950ca7b2b6d95ac29e56b34602ba1fe 146 SUPERFAMILY SSF48403 2 106 1.61E-14 T 25-04-2016 IPR020683 Ankyrin repeat-containing domain RJP_RS02695 d950ca7b2b6d95ac29e56b34602ba1fe 146 Gene3D G3DSA:1.25.40.20 1 106 1.4E-13 T 25-04-2016 IPR020683 Ankyrin repeat-containing domain RJP_RS02695 d950ca7b2b6d95ac29e56b34602ba1fe 146 SMART SM00248 78 107 1300.0 T 25-04-2016 IPR002110 Ankyrin repeat GO:0005515 RJP_RS02695 d950ca7b2b6d95ac29e56b34602ba1fe 146 SMART SM00248 9 38 0.85 T 25-04-2016 IPR002110 Ankyrin repeat GO:0005515 RJP_RS02695 d950ca7b2b6d95ac29e56b34602ba1fe 146 SMART SM00248 42 75 300.0 T 25-04-2016 IPR002110 Ankyrin repeat GO:0005515 RJP_RS04860 0b601f3d0331f9963c832801629177fb 44 PANTHER PTHR14503 1 44 5.1E-20 T 25-04-2016 IPR000271 Ribosomal protein L34 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RJP_RS04860 0b601f3d0331f9963c832801629177fb 44 ProDom PD003101 RIBOSOMAL L34 RIBONUCLEOPROTEIN 50S CHLOROPLAST PLASTID L34 MITOCHONDRIAL PEPTIDE SEQUENCING 1 39 1.0E-14 T 25-04-2016 IPR000271 Ribosomal protein L34 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RJP_RS04860 0b601f3d0331f9963c832801629177fb 44 Hamap MF_00391 50S ribosomal protein L34 [rpmH]. 1 44 15.78 T 25-04-2016 IPR000271 Ribosomal protein L34 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RJP_RS04860 0b601f3d0331f9963c832801629177fb 44 TIGRFAM TIGR01030 rpmH_bact: ribosomal protein bL34 1 44 1.3E-24 T 25-04-2016 IPR000271 Ribosomal protein L34 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RJP_RS04860 0b601f3d0331f9963c832801629177fb 44 ProSitePatterns PS00784 Ribosomal protein L34 signature. 2 21 - T 25-04-2016 IPR020939 Ribosomal protein L34, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 RJP_RS04860 0b601f3d0331f9963c832801629177fb 44 Pfam PF00468 Ribosomal protein L34 1 44 3.0E-23 T 25-04-2016 IPR000271 Ribosomal protein L34 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RJP_RS00505 16216e61b3e260e7ff400eeb8494154f 255 Gene3D G3DSA:3.40.50.300 2 252 1.3E-69 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RJP_RS00505 16216e61b3e260e7ff400eeb8494154f 255 Pfam PF13614 AAA domain 1 177 3.6E-66 T 25-04-2016 IPR025669 AAA domain RJP_RS00505 16216e61b3e260e7ff400eeb8494154f 255 PANTHER PTHR13696 1 255 1.3E-86 T 25-04-2016 RJP_RS00505 16216e61b3e260e7ff400eeb8494154f 255 PANTHER PTHR13696:SF52 1 255 1.3E-86 T 25-04-2016 RJP_RS00505 16216e61b3e260e7ff400eeb8494154f 255 SUPERFAMILY SSF52540 1 252 1.32E-65 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RJP_RS02125 d20c11067c4e38a228bf43b6be8a9530 591 Gene3D G3DSA:3.40.50.300 351 552 2.0E-48 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RJP_RS02125 d20c11067c4e38a228bf43b6be8a9530 591 Gene3D G3DSA:3.40.50.300 114 221 2.0E-48 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RJP_RS02125 d20c11067c4e38a228bf43b6be8a9530 591 PANTHER PTHR37937:SF1 16 571 3.7E-58 T 25-04-2016 RJP_RS02125 d20c11067c4e38a228bf43b6be8a9530 591 PANTHER PTHR37937 16 571 3.7E-58 T 25-04-2016 RJP_RS02125 d20c11067c4e38a228bf43b6be8a9530 591 SUPERFAMILY SSF52540 111 553 5.31E-47 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RJP_RS02125 d20c11067c4e38a228bf43b6be8a9530 591 Pfam PF02534 Type IV secretory system Conjugative DNA transfer 120 567 5.2E-166 T 25-04-2016 IPR003688 Type IV secretion system protein TraG/VirD4 GO:0009291|GO:0016020 RJP_RS04665 80ef5f54fda8f50326b05ae6c369f0d7 351 PANTHER PTHR21716 1 337 1.3E-67 T 25-04-2016 IPR002549 Transmembrane protein TqsA-like RJP_RS04665 80ef5f54fda8f50326b05ae6c369f0d7 351 Pfam PF01594 Domain of unknown function DUF20 5 336 1.8E-54 T 25-04-2016 IPR002549 Transmembrane protein TqsA-like RJP_RS05050 4b83328ae6c8767da06d66b5c7265b8b 173 SUPERFAMILY SSF50324 12 171 1.18E-63 T 25-04-2016 IPR008162 Inorganic pyrophosphatase GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1|Reactome: REACT_21259|Reactome: REACT_71 RJP_RS05050 4b83328ae6c8767da06d66b5c7265b8b 173 Gene3D G3DSA:3.90.80.10 6 171 5.1E-59 T 25-04-2016 IPR008162 Inorganic pyrophosphatase GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1|Reactome: REACT_21259|Reactome: REACT_71 RJP_RS05050 4b83328ae6c8767da06d66b5c7265b8b 173 Pfam PF00719 Inorganic pyrophosphatase 17 171 1.1E-53 T 25-04-2016 IPR008162 Inorganic pyrophosphatase GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1|Reactome: REACT_21259|Reactome: REACT_71 RJP_RS05050 4b83328ae6c8767da06d66b5c7265b8b 173 PANTHER PTHR10286 14 171 3.3E-64 T 25-04-2016 IPR008162 Inorganic pyrophosphatase GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1|Reactome: REACT_21259|Reactome: REACT_71 RJP_RS05050 4b83328ae6c8767da06d66b5c7265b8b 173 Hamap MF_00209 Inorganic pyrophosphatase [ppa]. 13 173 37.343 T 25-04-2016 IPR008162 Inorganic pyrophosphatase GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1|Reactome: REACT_21259|Reactome: REACT_71 RJP_RS05050 4b83328ae6c8767da06d66b5c7265b8b 173 ProSitePatterns PS00387 Inorganic pyrophosphatase signature. 65 71 - T 25-04-2016 IPR008162 Inorganic pyrophosphatase GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1|Reactome: REACT_21259|Reactome: REACT_71 RJP_RS05050 4b83328ae6c8767da06d66b5c7265b8b 173 PANTHER PTHR10286:SF15 14 171 3.3E-64 T 25-04-2016 RJP_RS00840 d63770af4257647ad9385b6e8da17ee3 78 Pfam PF10073 Uncharacterized protein conserved in bacteria (DUF2312) 7 77 5.7E-27 T 25-04-2016 IPR018753 Azospirillum phage Cd, Gp10 RJP_RS00840 d63770af4257647ad9385b6e8da17ee3 78 Hamap MF_00797 UPF0335 protein . 1 78 20.546 T 25-04-2016 IPR018753 Azospirillum phage Cd, Gp10 RJP_RS01300 2253b9014c3f373bb5d4830806183d8c 324 Gene3D G3DSA:1.10.8.60 135 217 1.2E-4 T 25-04-2016 RJP_RS01300 2253b9014c3f373bb5d4830806183d8c 324 SUPERFAMILY SSF48019 212 310 1.28E-7 T 25-04-2016 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal GO:0003677|GO:0006260 Reactome: REACT_152|Reactome: REACT_1538|Reactome: REACT_216|Reactome: REACT_22172|Reactome: REACT_383 RJP_RS01300 2253b9014c3f373bb5d4830806183d8c 324 SUPERFAMILY SSF52540 10 199 1.59E-6 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RJP_RS01300 2253b9014c3f373bb5d4830806183d8c 324 PANTHER PTHR34388 1 308 8.3E-19 T 25-04-2016 RJP_RS05465 5dc585a752b2eeff4238a2ad1d3d332c 300 PANTHER PTHR34611 7 294 5.9E-36 T 25-04-2016 RJP_RS05465 5dc585a752b2eeff4238a2ad1d3d332c 300 Pfam PF04754 Putative transposase, YhgA-like 6 191 6.6E-51 T 25-04-2016 IPR006842 Transposase (putative), YhgA-like RJP_RS03975 bd96a2e681a592c7e19397683b33f3ba 417 Pfam PF07690 Major Facilitator Superfamily 10 335 2.1E-17 T 25-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 RJP_RS03975 bd96a2e681a592c7e19397683b33f3ba 417 PANTHER PTHR12778 5 413 3.9E-53 T 25-04-2016 RJP_RS03975 bd96a2e681a592c7e19397683b33f3ba 417 SUPERFAMILY SSF103473 7 414 6.67E-34 T 25-04-2016 IPR020846 Major facilitator superfamily domain RJP_RS03975 bd96a2e681a592c7e19397683b33f3ba 417 Gene3D G3DSA:1.20.1250.20 235 413 3.0E-13 T 25-04-2016 RJP_RS03975 bd96a2e681a592c7e19397683b33f3ba 417 Gene3D G3DSA:1.20.1250.20 6 189 1.5E-7 T 25-04-2016 RJP_RS01125 85298de027485848b9ebb3aff8aa7bdd 353 SUPERFAMILY SSF53474 7 168 6.23E-13 T 25-04-2016 IPR029058 Alpha/Beta hydrolase fold RJP_RS01125 85298de027485848b9ebb3aff8aa7bdd 353 Gene3D G3DSA:3.40.50.1820 42 168 2.8E-12 T 25-04-2016 IPR029058 Alpha/Beta hydrolase fold RJP_RS02450 cb06e94663905cf546276cf9323494b9 93 SUPERFAMILY SSF47413 3 77 5.07E-25 T 25-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 RJP_RS02450 cb06e94663905cf546276cf9323494b9 93 Pfam PF01381 Helix-turn-helix 10 62 8.4E-10 T 25-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 RJP_RS02450 cb06e94663905cf546276cf9323494b9 93 TIGRFAM TIGR02607 antidote_HigA: addiction module antidote protein, HigA family 2 76 3.6E-29 T 25-04-2016 IPR013430 Toxin-antitoxin system, antidote protein, HigA GO:0003677 RJP_RS02450 cb06e94663905cf546276cf9323494b9 93 PANTHER PTHR36924:SF1 1 93 5.5E-29 T 25-04-2016 RJP_RS02450 cb06e94663905cf546276cf9323494b9 93 Gene3D G3DSA:1.10.260.40 1 76 1.6E-30 T 25-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 RJP_RS02450 cb06e94663905cf546276cf9323494b9 93 PANTHER PTHR36924 1 93 5.5E-29 T 25-04-2016 RJP_RS02450 cb06e94663905cf546276cf9323494b9 93 SMART SM00530 7 62 5.7E-8 T 25-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 RJP_RS01075 5d26edf383e6d98c2a9f150bb160cefa 107 Pfam PF01899 Na+/H+ ion antiporter subunit 8 93 3.5E-19 T 25-04-2016 IPR002758 Na+/H+ antiporter subunit E GO:0006812|GO:0008324|GO:0016021 RJP_RS04505 219e690a078eb8021c6d2bbfd9e41b0c 85 Gene3D G3DSA:3.30.565.10 3 41 6.6E-4 T 25-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RJP_RS01235 368bcf28cc338756238c4147da857334 104 Pfam PF03091 CutA1 divalent ion tolerance protein 5 101 8.9E-30 T 25-04-2016 IPR004323 Divalent ion tolerance protein, CutA GO:0010038 RJP_RS01235 368bcf28cc338756238c4147da857334 104 PANTHER PTHR23419:SF0 6 100 1.7E-21 T 25-04-2016 RJP_RS01235 368bcf28cc338756238c4147da857334 104 Gene3D G3DSA:3.30.70.830 2 102 1.1E-34 T 25-04-2016 RJP_RS01235 368bcf28cc338756238c4147da857334 104 PANTHER PTHR23419 6 100 1.7E-21 T 25-04-2016 IPR004323 Divalent ion tolerance protein, CutA GO:0010038 RJP_RS01235 368bcf28cc338756238c4147da857334 104 SUPERFAMILY SSF54913 2 102 4.08E-33 T 25-04-2016 IPR011322 Nitrogen regulatory PII-like, alpha/beta RJP_RS06810 43818fe52e2a610099e82f2ea0569750 71 Gene3D G3DSA:1.25.40.20 13 48 2.2E-6 T 25-04-2016 IPR020683 Ankyrin repeat-containing domain RJP_RS06810 43818fe52e2a610099e82f2ea0569750 71 SUPERFAMILY SSF48403 12 50 6.58E-7 T 25-04-2016 IPR020683 Ankyrin repeat-containing domain RJP_RS06810 43818fe52e2a610099e82f2ea0569750 71 Pfam PF00023 Ankyrin repeat 17 46 1.1E-5 T 25-04-2016 IPR002110 Ankyrin repeat GO:0005515 RJP_RS03020 0f02566098db9cb3a12e02391131f009 153 Gene3D G3DSA:3.30.2090.10 1 74 1.7E-10 T 25-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains RJP_RS03020 0f02566098db9cb3a12e02391131f009 153 Gene3D G3DSA:3.30.70.1320 75 127 1.0E-6 T 25-04-2016 RJP_RS03020 0f02566098db9cb3a12e02391131f009 153 SUPERFAMILY SSF82693 80 133 4.92E-9 T 25-04-2016 RJP_RS03020 0f02566098db9cb3a12e02391131f009 153 PANTHER PTHR32063 1 140 9.6E-44 T 25-04-2016 RJP_RS03020 0f02566098db9cb3a12e02391131f009 153 Pfam PF00873 AcrB/AcrD/AcrF family 1 139 1.5E-25 T 25-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 RJP_RS03020 0f02566098db9cb3a12e02391131f009 153 SUPERFAMILY SSF82714 1 76 4.71E-12 T 25-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains RJP_RS03020 0f02566098db9cb3a12e02391131f009 153 PANTHER PTHR32063:SF21 1 140 9.6E-44 T 25-04-2016 RJP_RS04425 f182be8b308192921e3676922083e424 465 Pfam PF00474 Sodium:solute symporter family 51 405 4.5E-25 T 25-04-2016 IPR001734 Sodium/solute symporter GO:0005215|GO:0006810|GO:0016020|GO:0055085 RJP_RS04425 f182be8b308192921e3676922083e424 465 PANTHER PTHR11819 4 465 1.2E-34 T 25-04-2016 IPR001734 Sodium/solute symporter GO:0005215|GO:0006810|GO:0016020|GO:0055085 RJP_RS01800 ebb4b01346aaf3a2c8b54c4efb222f99 267 Pfam PF03799 Cell division protein FtsQ 145 257 1.1E-9 T 25-04-2016 IPR005548 Cell division protein FtsQ/DivIB RJP_RS01800 ebb4b01346aaf3a2c8b54c4efb222f99 267 Pfam PF08478 POTRA domain, FtsQ-type 73 141 2.0E-18 T 25-04-2016 IPR013685 Polypeptide-transport-associated, FtsQ-type RJP_RS01800 ebb4b01346aaf3a2c8b54c4efb222f99 267 PANTHER PTHR35851:SF1 73 257 9.8E-20 T 25-04-2016 RJP_RS01800 ebb4b01346aaf3a2c8b54c4efb222f99 267 PANTHER PTHR35851 73 257 9.8E-20 T 25-04-2016 RJP_RS01800 ebb4b01346aaf3a2c8b54c4efb222f99 267 Hamap MF_00911 Cell division protein FtsQ [ftsQ]. 43 265 20.882 T 25-04-2016 IPR026579 Cell division protein FtsQ GO:0000917 RJP_RS02130 6a2df74b8deb5fdd431c0061bf690028 470 PANTHER PTHR30005 1 370 2.7E-24 T 25-04-2016 RJP_RS02130 6a2df74b8deb5fdd431c0061bf690028 470 Gene3D G3DSA:3.30.420.40 1 118 5.3E-18 T 25-04-2016 RJP_RS02130 6a2df74b8deb5fdd431c0061bf690028 470 Pfam PF02541 Ppx/GppA phosphatase family 25 282 5.8E-73 T 25-04-2016 IPR003695 Ppx/GppA phosphatase KEGG: 00230+3.6.1.40|UniPathway: UPA00908 RJP_RS02130 6a2df74b8deb5fdd431c0061bf690028 470 SUPERFAMILY SSF53067 2 119 2.59E-19 T 25-04-2016 RJP_RS02130 6a2df74b8deb5fdd431c0061bf690028 470 Gene3D G3DSA:3.30.420.150 126 281 5.2E-13 T 25-04-2016 RJP_RS02130 6a2df74b8deb5fdd431c0061bf690028 470 SUPERFAMILY SSF53067 125 282 1.21E-21 T 25-04-2016 RJP_RS00440 85e07154e253fd8475d3bb031455f82b 181 Pfam PF01066 CDP-alcohol phosphatidyltransferase 6 73 2.2E-19 T 25-04-2016 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 RJP_RS00440 85e07154e253fd8475d3bb031455f82b 181 TIGRFAM TIGR00560 pgsA: CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase 5 178 1.1E-49 T 25-04-2016 IPR004570 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase GO:0008444|GO:0008654|GO:0016021 KEGG: 00564+2.7.8.5|MetaCyc: PWY-5269|MetaCyc: PWY-5668|UniPathway: UPA00084 RJP_RS00440 85e07154e253fd8475d3bb031455f82b 181 PIRSF PIRSF000847 2 181 3.5E-47 T 25-04-2016 IPR004570 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase GO:0008444|GO:0008654|GO:0016021 KEGG: 00564+2.7.8.5|MetaCyc: PWY-5269|MetaCyc: PWY-5668|UniPathway: UPA00084 RJP_RS00440 85e07154e253fd8475d3bb031455f82b 181 ProSitePatterns PS00379 CDP-alcohol phosphatidyltransferases signature. 51 73 - T 25-04-2016 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 RJP_RS00440 85e07154e253fd8475d3bb031455f82b 181 PANTHER PTHR14269 6 174 1.6E-40 T 25-04-2016 RJP_RS00040 1802b09ba3cc3d2d6937a96406c4d6ee 97 Pfam PF02452 PemK-like, MazF-like toxin of type II toxin-antitoxin system 9 91 8.2E-13 T 25-04-2016 IPR003477 mRNA interferase PemK-like protein GO:0003677 RJP_RS00040 1802b09ba3cc3d2d6937a96406c4d6ee 97 Gene3D G3DSA:2.30.30.110 19 90 7.5E-9 T 25-04-2016 IPR011067 Plasmid maintenance toxin/Cell growth inhibitor RJP_RS00040 1802b09ba3cc3d2d6937a96406c4d6ee 97 SUPERFAMILY SSF50118 10 90 7.03E-16 T 25-04-2016 IPR011067 Plasmid maintenance toxin/Cell growth inhibitor RJP_RS06015 f61c40674b1e6934169593888e56aa29 431 ProDom PD215945 TRANSMEMBRANE MEMBRANE RP760 59 418 0.0 T 25-04-2016 IPR020182 Uncharacterised protein family RP760 RJP_RS05750 2cfa2ed719f1eed8550d10ebc49b2327 240 Pfam PF02104 SURF1 family 9 210 6.9E-33 T 25-04-2016 IPR002994 Surfeit locus 1/Shy1 GO:0016020 RJP_RS05750 2cfa2ed719f1eed8550d10ebc49b2327 240 PANTHER PTHR23427 5 238 6.8E-32 T 25-04-2016 RJP_RS05750 2cfa2ed719f1eed8550d10ebc49b2327 240 PANTHER PTHR23427:SF2 5 238 6.8E-32 T 25-04-2016 RJP_RS00295 624baccad86c497033e74fe805c0618d 131 SUPERFAMILY SSF103515 3 109 3.79E-10 T 25-04-2016 IPR005546 Autotransporter beta-domain RJP_RS00295 624baccad86c497033e74fe805c0618d 131 ProDom PD500946 RC0047 SURFACE SCA10 CELL ANTIGEN-LIKE 50 87 8.0E-16 T 25-04-2016 RJP_RS00295 624baccad86c497033e74fe805c0618d 131 Pfam PF03797 Autotransporter beta-domain 3 105 8.2E-7 T 25-04-2016 IPR005546 Autotransporter beta-domain RJP_RS06275 123b9e525ad8921c738732efee33bb65 339 PANTHER PTHR11432:SF3 7 338 1.6E-190 T 25-04-2016 RJP_RS06275 123b9e525ad8921c738732efee33bb65 339 ProSitePatterns PS00667 Respiratory-chain NADH dehydrogenase subunit 1 signature 1. 57 72 - T 25-04-2016 IPR018086 NADH:ubiquinone oxidoreductase, subunit 1, conserved site GO:0016020|GO:0055114 RJP_RS06275 123b9e525ad8921c738732efee33bb65 339 PANTHER PTHR11432 7 338 1.6E-190 T 25-04-2016 IPR001694 NADH:ubiquinone oxidoreductase, subunit 1/F420H2 oxidoreductase subunit H GO:0016020|GO:0055114 RJP_RS06275 123b9e525ad8921c738732efee33bb65 339 Pfam PF00146 NADH dehydrogenase 18 326 1.1E-131 T 25-04-2016 IPR001694 NADH:ubiquinone oxidoreductase, subunit 1/F420H2 oxidoreductase subunit H GO:0016020|GO:0055114 RJP_RS06275 123b9e525ad8921c738732efee33bb65 339 Hamap MF_01350 NAD(P)H-quinone oxidoreductase subunit 1, chloroplastic [ndhA]. 11 333 25.801 T 25-04-2016 IPR001694 NADH:ubiquinone oxidoreductase, subunit 1/F420H2 oxidoreductase subunit H GO:0016020|GO:0055114 RJP_RS06275 123b9e525ad8921c738732efee33bb65 339 ProSitePatterns PS00668 Respiratory-chain NADH dehydrogenase subunit 1 signature 2. 214 227 - T 25-04-2016 IPR018086 NADH:ubiquinone oxidoreductase, subunit 1, conserved site GO:0016020|GO:0055114 RJP_RS05935 7726df760ed8a9b22bd340db9ab95985 53 TIGRFAM TIGR01411 tatAE: twin arginine-targeting protein translocase, TatA/E family 2 47 3.2E-21 T 25-04-2016 IPR006312 Sec-independent protein translocase protein TatA/E GO:0005886|GO:0008565|GO:0009306|GO:0015031|GO:0016021 RJP_RS05935 7726df760ed8a9b22bd340db9ab95985 53 Hamap MF_00236 Sec-independent protein translocase protein TatA [tatA]. 2 53 18.711 T 25-04-2016 IPR006312 Sec-independent protein translocase protein TatA/E GO:0005886|GO:0008565|GO:0009306|GO:0015031|GO:0016021 RJP_RS05935 7726df760ed8a9b22bd340db9ab95985 53 Pfam PF02416 mttA/Hcf106 family 3 53 8.8E-14 T 25-04-2016 IPR003369 Sec-independent protein translocase protein TatA/B/E GO:0008565|GO:0015031 RJP_RS03945 22086787b89622ce52f0a73ab5e3d0b2 239 PANTHER PTHR12277:SF79 27 211 3.0E-52 T 25-04-2016 RJP_RS03945 22086787b89622ce52f0a73ab5e3d0b2 239 PANTHER PTHR12277 27 211 3.0E-52 T 25-04-2016 RJP_RS03945 22086787b89622ce52f0a73ab5e3d0b2 239 Pfam PF02129 X-Pro dipeptidyl-peptidase (S15 family) 26 139 1.3E-10 T 25-04-2016 IPR000383 Xaa-Pro dipeptidyl-peptidase-like domain GO:0016787 RJP_RS03945 22086787b89622ce52f0a73ab5e3d0b2 239 Gene3D G3DSA:3.40.50.1820 4 211 2.1E-53 T 25-04-2016 IPR029058 Alpha/Beta hydrolase fold RJP_RS03945 22086787b89622ce52f0a73ab5e3d0b2 239 SUPERFAMILY SSF53474 4 211 2.16E-47 T 25-04-2016 IPR029058 Alpha/Beta hydrolase fold RJP_RS04570 c7fe8e7862b0b58c147c71f15bbf2686 282 PANTHER PTHR10657 81 272 3.5E-36 T 25-04-2016 RJP_RS04570 c7fe8e7862b0b58c147c71f15bbf2686 282 Pfam PF13616 PPIC-type PPIASE domain 129 233 2.0E-26 T 25-04-2016 RJP_RS04570 c7fe8e7862b0b58c147c71f15bbf2686 282 Gene3D G3DSA:3.10.50.40 135 254 2.0E-36 T 25-04-2016 RJP_RS04570 c7fe8e7862b0b58c147c71f15bbf2686 282 SUPERFAMILY SSF54534 107 231 1.11E-28 T 25-04-2016 RJP_RS01395 8ea4154e197fa40bdcc7c8f983bb64c9 350 ProDom PD208305 RP198 PRECURSOR SIGNAL 1 345 1.0E-172 T 25-04-2016 RJP_RS02530 d078bcb88f9f4a859f11181c0974a390 250 PANTHER PTHR37822 5 223 3.8E-36 T 25-04-2016 RJP_RS02530 d078bcb88f9f4a859f11181c0974a390 250 PANTHER PTHR37822:SF2 5 223 3.8E-36 T 25-04-2016 RJP_RS02115 43180c4e9680a0913b34ac879518a069 482 Pfam PF03743 Bacterial conjugation TrbI-like protein 193 356 1.9E-32 T 25-04-2016 IPR005498 Type IV secretion system, VirB10 / TraB / TrbI RJP_RS03345 e61d3b9a969aef13969d53ba4cd1d917 192 PANTHER PTHR33231 1 186 3.2E-27 T 25-04-2016 RJP_RS03345 e61d3b9a969aef13969d53ba4cd1d917 192 Gene3D G3DSA:3.30.160.100 1 99 2.1E-22 T 25-04-2016 IPR003489 Ribosomal protein S30Ae/sigma 54 modulation protein GO:0044238 RJP_RS03345 e61d3b9a969aef13969d53ba4cd1d917 192 SUPERFAMILY SSF69754 1 106 3.53E-26 T 25-04-2016 IPR003489 Ribosomal protein S30Ae/sigma 54 modulation protein GO:0044238 RJP_RS03345 e61d3b9a969aef13969d53ba4cd1d917 192 Pfam PF16321 Sigma 54 modulation/S30EA ribosomal protein C terminus 134 186 5.4E-15 T 25-04-2016 IPR032528 Sigma 54 modulation/S30EA ribosomal protein, C-terminal RJP_RS03345 e61d3b9a969aef13969d53ba4cd1d917 192 Pfam PF02482 Sigma 54 modulation protein / S30EA ribosomal protein 3 96 5.1E-18 T 25-04-2016 IPR003489 Ribosomal protein S30Ae/sigma 54 modulation protein GO:0044238 RJP_RS03345 e61d3b9a969aef13969d53ba4cd1d917 192 TIGRFAM TIGR00741 yfiA: ribosomal subunit interface protein 1 103 6.2E-31 T 25-04-2016 IPR003489 Ribosomal protein S30Ae/sigma 54 modulation protein GO:0044238 RJP_RS02220 90fdab1d866cfe0a8abeadc896689081 465 PANTHER PTHR11785:SF405 4 457 1.3E-126 T 25-04-2016 RJP_RS02220 90fdab1d866cfe0a8abeadc896689081 465 PANTHER PTHR11785 4 457 1.3E-126 T 25-04-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 RJP_RS02220 90fdab1d866cfe0a8abeadc896689081 465 PIRSF PIRSF006060 6 465 7.5E-83 T 25-04-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 RJP_RS02220 90fdab1d866cfe0a8abeadc896689081 465 Pfam PF13520 Amino acid permease 28 451 1.8E-46 T 25-04-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 RJP_RS02735 23d0a35b3f701321bb3b3fa2de571942 82 SUPERFAMILY SSF89447 3 44 2.22E-9 T 25-04-2016 RJP_RS02735 23d0a35b3f701321bb3b3fa2de571942 82 Pfam PF04014 Antidote-toxin recognition MazE, bacterial antitoxin 8 49 4.1E-6 T 25-04-2016 IPR007159 SpoVT-AbrB domain GO:0003677 RJP_RS02735 23d0a35b3f701321bb3b3fa2de571942 82 TIGRFAM TIGR01439 lp_hng_hel_AbrB: transcriptional regulator, AbrB family 6 46 1.1E-15 T 25-04-2016 IPR007159 SpoVT-AbrB domain GO:0003677 RJP_RS02735 23d0a35b3f701321bb3b3fa2de571942 82 SMART SM00966 7 51 6.4E-7 T 25-04-2016 IPR007159 SpoVT-AbrB domain GO:0003677 RJP_RS02735 23d0a35b3f701321bb3b3fa2de571942 82 Gene3D G3DSA:2.10.260.10 5 40 3.7E-8 T 25-04-2016 RJP_RS05590 26c546cb6e4c340999df95e3abe773b6 632 SUPERFAMILY SSF54001 436 594 7.26E-16 T 25-04-2016 RJP_RS05590 26c546cb6e4c340999df95e3abe773b6 632 Gene3D G3DSA:3.30.310.130 478 560 2.2E-7 T 25-04-2016 RJP_RS05590 26c546cb6e4c340999df95e3abe773b6 632 Pfam PF02902 Ulp1 protease family, C-terminal catalytic domain 476 567 1.4E-5 T 25-04-2016 IPR003653 Ulp1 protease family, C-terminal catalytic domain GO:0006508|GO:0008234 RJP_RS01315 ade8ffd262f19de1b1d24418d845bcc0 119 Pfam PF04956 TrbC/VIRB2 family 15 107 2.9E-18 T 25-04-2016 IPR007039 Conjugal transfer TrbC/type IV secretion VirB2 RJP_RS02905 77dc8064dd2e0fc449963bfd4ef5d419 214 Pfam PF08534 Redoxin 44 175 7.5E-19 T 25-04-2016 IPR013740 Redoxin GO:0016491 RJP_RS02905 77dc8064dd2e0fc449963bfd4ef5d419 214 PANTHER PTHR10681:SF68 14 184 3.8E-15 T 25-04-2016 RJP_RS02905 77dc8064dd2e0fc449963bfd4ef5d419 214 PANTHER PTHR10681 14 184 3.8E-15 T 25-04-2016 RJP_RS02905 77dc8064dd2e0fc449963bfd4ef5d419 214 SUPERFAMILY SSF52833 20 179 2.76E-30 T 25-04-2016 IPR012336 Thioredoxin-like fold RJP_RS02905 77dc8064dd2e0fc449963bfd4ef5d419 214 Gene3D G3DSA:3.40.30.10 8 191 1.0E-34 T 25-04-2016 IPR012336 Thioredoxin-like fold RJP_RS03025 d52fab6260dc4c64599e87f08aeab79f 43 SUPERFAMILY SSF82693 1 36 7.85E-6 T 25-04-2016 RJP_RS03025 d52fab6260dc4c64599e87f08aeab79f 43 Gene3D G3DSA:3.30.70.1430 1 36 9.5E-8 T 25-04-2016 RJP_RS05060 fa5142ab26113cf5bc9081278c2c7a40 205 SUPERFAMILY SSF52833 49 203 1.58E-51 T 25-04-2016 IPR012336 Thioredoxin-like fold RJP_RS05060 fa5142ab26113cf5bc9081278c2c7a40 205 Pfam PF02630 SCO1/SenC 14 192 5.6E-71 T 25-04-2016 IPR003782 Copper chaperone SCO1/SenC RJP_RS05060 fa5142ab26113cf5bc9081278c2c7a40 205 PANTHER PTHR12151 10 205 3.2E-64 T 25-04-2016 IPR003782 Copper chaperone SCO1/SenC RJP_RS05060 fa5142ab26113cf5bc9081278c2c7a40 205 Gene3D G3DSA:3.40.30.10 10 203 9.0E-60 T 25-04-2016 IPR012336 Thioredoxin-like fold RJP_RS03205 3a05904e2038e3183148501376e13d17 141 ProDom PD085709 MEMBRANE RP436 UNCHARACTERIZED INTEGRAL PREDICTED TRANSMEMBRANE 5 140 2.0E-56 T 25-04-2016 IPR020143 Uncharacterised protein family, RP436 RJP_RS04050 593c7a20a5b77bef6d2703413195eb9a 59 Gene3D G3DSA:3.10.350.10 7 46 4.7E-14 T 25-04-2016 IPR018392 LysM domain RJP_RS04050 593c7a20a5b77bef6d2703413195eb9a 59 Pfam PF01476 LysM domain 9 49 3.3E-13 T 25-04-2016 IPR018392 LysM domain RJP_RS04050 593c7a20a5b77bef6d2703413195eb9a 59 SUPERFAMILY SSF54106 7 50 1.06E-10 T 25-04-2016 IPR018392 LysM domain RJP_RS04050 593c7a20a5b77bef6d2703413195eb9a 59 SMART SM00257 8 52 5.1E-9 T 25-04-2016 IPR018392 LysM domain RJP_RS04450 89f016449f6c03d66946bd30f77277e6 173 Pfam PF08713 DNA alkylation repair enzyme 3 161 8.4E-52 T 25-04-2016 IPR014825 DNA alkylation repair enzyme RJP_RS04450 89f016449f6c03d66946bd30f77277e6 173 Gene3D G3DSA:1.25.40.290 68 164 2.3E-23 T 25-04-2016 RJP_RS04450 89f016449f6c03d66946bd30f77277e6 173 SUPERFAMILY SSF48371 3 162 7.19E-36 T 25-04-2016 IPR016024 Armadillo-type fold GO:0005488 RJP_RS04450 89f016449f6c03d66946bd30f77277e6 173 PANTHER PTHR34070:SF1 1 169 4.0E-36 T 25-04-2016 RJP_RS04450 89f016449f6c03d66946bd30f77277e6 173 PANTHER PTHR34070 1 169 4.0E-36 T 25-04-2016 RJP_RS01750 a14805502266f4bf065bc6b1de4de6f2 231 Pfam PF02666 Phosphatidylserine decarboxylase 45 215 3.4E-30 T 25-04-2016 IPR003817 Phosphatidylserine decarboxylase-related GO:0004609|GO:0008654 KEGG: 00564+4.1.1.65|MetaCyc: PWY-5669|UniPathway: UPA00558 RJP_RS01750 a14805502266f4bf065bc6b1de4de6f2 231 TIGRFAM TIGR00164 PS_decarb_rel: phosphatidylserine decarboxylase homolog 10 218 1.4E-57 T 25-04-2016 IPR033175 Phosphatidylserine decarboxylase, archaeal-type KEGG: 00564+4.1.1.65|MetaCyc: PWY-5669|UniPathway: UPA00558 RJP_RS01750 a14805502266f4bf065bc6b1de4de6f2 231 Hamap MF_00664 Phosphatidylserine decarboxylase proenzyme [psd]. 10 219 38.342 T 25-04-2016 IPR033175 Phosphatidylserine decarboxylase, archaeal-type KEGG: 00564+4.1.1.65|MetaCyc: PWY-5669|UniPathway: UPA00558 RJP_RS01750 a14805502266f4bf065bc6b1de4de6f2 231 PANTHER PTHR35809 1 222 1.4E-72 T 25-04-2016 RJP_RS03450 9b44208418fc17657c39493ede3617b8 949 SUPERFAMILY SSF141571 634 671 6.02E-5 T 25-04-2016 RJP_RS03450 9b44208418fc17657c39493ede3617b8 949 Pfam PF00805 Pentapeptide repeats (8 copies) 634 666 9.0E-4 T 25-04-2016 IPR001646 Pentapeptide repeat RJP_RS06485 5f3e8297291b0ec7f4c2c11f22de02a8 524 Pfam PF13624 SurA N-terminal domain 1 158 1.0E-21 T 25-04-2016 RJP_RS06485 5f3e8297291b0ec7f4c2c11f22de02a8 524 Pfam PF13145 PPIC-type PPIASE domain 249 383 1.5E-13 T 25-04-2016 IPR000297 Peptidyl-prolyl cis-trans isomerase, PpiC-type GO:0016853 RJP_RS06485 5f3e8297291b0ec7f4c2c11f22de02a8 524 Gene3D G3DSA:3.10.50.40 293 392 2.4E-5 T 25-04-2016 RJP_RS02495 21fabcbe7ac3a8f6cad1b1a31a613d52 255 PRINTS PR00111 Alpha/beta hydrolase fold signature 54 69 2.6E-6 T 25-04-2016 IPR000073 Alpha/beta hydrolase fold-1 RJP_RS02495 21fabcbe7ac3a8f6cad1b1a31a613d52 255 PRINTS PR00111 Alpha/beta hydrolase fold signature 98 111 2.6E-6 T 25-04-2016 IPR000073 Alpha/beta hydrolase fold-1 RJP_RS02495 21fabcbe7ac3a8f6cad1b1a31a613d52 255 PRINTS PR00111 Alpha/beta hydrolase fold signature 112 125 2.6E-6 T 25-04-2016 IPR000073 Alpha/beta hydrolase fold-1 RJP_RS02495 21fabcbe7ac3a8f6cad1b1a31a613d52 255 Pfam PF00561 alpha/beta hydrolase fold 26 142 3.1E-14 T 25-04-2016 IPR000073 Alpha/beta hydrolase fold-1 RJP_RS02495 21fabcbe7ac3a8f6cad1b1a31a613d52 255 SUPERFAMILY SSF53474 17 235 4.05E-36 T 25-04-2016 IPR029058 Alpha/Beta hydrolase fold RJP_RS02495 21fabcbe7ac3a8f6cad1b1a31a613d52 255 PANTHER PTHR16138 4 255 1.8E-108 T 25-04-2016 RJP_RS02495 21fabcbe7ac3a8f6cad1b1a31a613d52 255 Gene3D G3DSA:3.40.50.1820 178 237 7.7E-33 T 25-04-2016 IPR029058 Alpha/Beta hydrolase fold RJP_RS02495 21fabcbe7ac3a8f6cad1b1a31a613d52 255 Gene3D G3DSA:3.40.50.1820 22 130 7.7E-33 T 25-04-2016 IPR029058 Alpha/Beta hydrolase fold RJP_RS02580 6a658822df64349416d8d20c99f7e16c 181 PANTHER PTHR10429 1 169 1.9E-52 T 25-04-2016 IPR003180 Methylpurine-DNA glycosylase (MPG) GO:0003677|GO:0003905|GO:0006284 RJP_RS02580 6a658822df64349416d8d20c99f7e16c 181 SUPERFAMILY SSF50486 5 171 8.63E-57 T 25-04-2016 IPR011034 Formyl transferase, C-terminal-like GO:0003824 RJP_RS02580 6a658822df64349416d8d20c99f7e16c 181 PANTHER PTHR10429:SF0 1 169 1.9E-52 T 25-04-2016 RJP_RS02580 6a658822df64349416d8d20c99f7e16c 181 Gene3D G3DSA:3.10.300.10 4 171 9.5E-51 T 25-04-2016 IPR003180 Methylpurine-DNA glycosylase (MPG) GO:0003677|GO:0003905|GO:0006284 RJP_RS02580 6a658822df64349416d8d20c99f7e16c 181 TIGRFAM TIGR00567 3mg: DNA-3-methyladenine glycosylase 7 172 3.4E-41 T 25-04-2016 IPR003180 Methylpurine-DNA glycosylase (MPG) GO:0003677|GO:0003905|GO:0006284 RJP_RS02580 6a658822df64349416d8d20c99f7e16c 181 Hamap MF_00527 Putative 3-methyladenine DNA glycosylase. 9 176 30.332 T 25-04-2016 IPR003180 Methylpurine-DNA glycosylase (MPG) GO:0003677|GO:0003905|GO:0006284 RJP_RS02580 6a658822df64349416d8d20c99f7e16c 181 Pfam PF02245 Methylpurine-DNA glycosylase (MPG) 10 171 1.2E-51 T 25-04-2016 IPR003180 Methylpurine-DNA glycosylase (MPG) GO:0003677|GO:0003905|GO:0006284 RJP_RS02155 1018aa4dd318694e1f48064e6063751d 294 Pfam PF11019 Protein of unknown function (DUF2608) 23 285 3.4E-56 T 25-04-2016 IPR022565 Protein of unknown function DUF2608 RJP_RS02155 1018aa4dd318694e1f48064e6063751d 294 ProDom PD317075 PRECURSOR RP296 SIGNAL 106 211 0.007 T 25-04-2016 IPR020531 Uncharacterised protein family, RP296 RJP_RS01755 63c054dad97c03ee69871d553ec025c9 255 PANTHER PTHR15362:SF2 15 149 1.1E-25 T 25-04-2016 RJP_RS01755 63c054dad97c03ee69871d553ec025c9 255 ProSitePatterns PS00379 CDP-alcohol phosphatidyltransferases signature. 60 82 - T 25-04-2016 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 RJP_RS01755 63c054dad97c03ee69871d553ec025c9 255 Pfam PF08009 CDP-alcohol phosphatidyltransferase 2 208 244 4.8E-8 T 25-04-2016 IPR012616 CDP-alcohol phosphatidyltransferase, C-terminal RJP_RS01755 63c054dad97c03ee69871d553ec025c9 255 PANTHER PTHR15362 15 149 1.1E-25 T 25-04-2016 RJP_RS01755 63c054dad97c03ee69871d553ec025c9 255 Pfam PF01066 CDP-alcohol phosphatidyltransferase 19 82 4.5E-16 T 25-04-2016 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 RJP_RS06210 6300e755fb1326946279ad5510ab09b3 810 Pfam PF03135 CagE, TrbE, VirB family, component of type IV transporter system 183 382 1.9E-50 T 25-04-2016 IPR018145 CagE, TrbE, VirB component of type IV transporter system, central domain GO:0005524 RJP_RS06210 6300e755fb1326946279ad5510ab09b3 810 TIGRFAM TIGR00929 VirB4_CagE: type IV secretion/conjugal transfer ATPase, VirB4 family 12 806 7.6E-224 T 25-04-2016 IPR004346 CagE, TrbE, VirB component of type IV transporter system GO:0005524 RJP_RS06210 6300e755fb1326946279ad5510ab09b3 810 SUPERFAMILY SSF52540 405 737 2.05E-10 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RJP_RS00780 634ba5dbdc027a4e9c4402f3bda634ba 805 TIGRFAM TIGR00929 VirB4_CagE: type IV secretion/conjugal transfer ATPase, VirB4 family 15 801 4.5E-293 T 25-04-2016 IPR004346 CagE, TrbE, VirB component of type IV transporter system GO:0005524 RJP_RS00780 634ba5dbdc027a4e9c4402f3bda634ba 805 Pfam PF03135 CagE, TrbE, VirB family, component of type IV transporter system 195 399 1.6E-70 T 25-04-2016 IPR018145 CagE, TrbE, VirB component of type IV transporter system, central domain GO:0005524 RJP_RS00780 634ba5dbdc027a4e9c4402f3bda634ba 805 Gene3D G3DSA:3.40.50.300 426 523 1.8E-14 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RJP_RS00780 634ba5dbdc027a4e9c4402f3bda634ba 805 Gene3D G3DSA:3.40.50.300 647 712 1.8E-14 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RJP_RS00780 634ba5dbdc027a4e9c4402f3bda634ba 805 Gene3D G3DSA:3.40.50.300 559 585 1.8E-14 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RJP_RS00780 634ba5dbdc027a4e9c4402f3bda634ba 805 SMART SM00382 450 708 4.2E-6 T 25-04-2016 IPR003593 AAA+ ATPase domain RJP_RS00780 634ba5dbdc027a4e9c4402f3bda634ba 805 SUPERFAMILY SSF52540 421 718 2.91E-42 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RJP_RS01610 aece65f4a9eb6d67350cf9a13635e6cb 37 SUPERFAMILY SSF52540 1 33 2.66E-8 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RJP_RS01610 aece65f4a9eb6d67350cf9a13635e6cb 37 Pfam PF00005 ABC transporter 2 33 1.4E-8 T 25-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 RJP_RS01610 aece65f4a9eb6d67350cf9a13635e6cb 37 Gene3D G3DSA:3.40.50.300 2 32 1.4E-8 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RJP_RS01230 da287d563e28eaf575c2c8ec3c1199bc 399 PANTHER PTHR11958 1 398 1.3E-281 T 25-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 RJP_RS01230 da287d563e28eaf575c2c8ec3c1199bc 399 PANTHER PTHR11958:SF65 1 398 1.3E-281 T 25-04-2016 RJP_RS01230 da287d563e28eaf575c2c8ec3c1199bc 399 PRINTS PR00173 Glutamate-aspartate symporter signature 68 93 1.6E-31 T 25-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 RJP_RS01230 da287d563e28eaf575c2c8ec3c1199bc 399 PRINTS PR00173 Glutamate-aspartate symporter signature 315 334 1.6E-31 T 25-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 RJP_RS01230 da287d563e28eaf575c2c8ec3c1199bc 399 PRINTS PR00173 Glutamate-aspartate symporter signature 1 21 1.6E-31 T 25-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 RJP_RS01230 da287d563e28eaf575c2c8ec3c1199bc 399 PRINTS PR00173 Glutamate-aspartate symporter signature 280 306 1.6E-31 T 25-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 RJP_RS01230 da287d563e28eaf575c2c8ec3c1199bc 399 PRINTS PR00173 Glutamate-aspartate symporter signature 342 362 1.6E-31 T 25-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 RJP_RS01230 da287d563e28eaf575c2c8ec3c1199bc 399 SUPERFAMILY SSF118215 3 388 1.44E-116 T 25-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 RJP_RS01230 da287d563e28eaf575c2c8ec3c1199bc 399 ProSitePatterns PS00713 Sodium:dicarboxylate symporter family signature 1. 30 45 - T 25-04-2016 IPR018107 Sodium:dicarboxylate symporter, conserved site Reactome: REACT_15518|Reactome: REACT_19419 RJP_RS01230 da287d563e28eaf575c2c8ec3c1199bc 399 Gene3D G3DSA:1.10.3860.10 2 394 4.9E-124 T 25-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 RJP_RS01230 da287d563e28eaf575c2c8ec3c1199bc 399 Pfam PF00375 Sodium:dicarboxylate symporter family 3 387 3.0E-123 T 25-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 RJP_RS03955 6659f848695cd540b0201a342c325666 250 TIGRFAM TIGR03774 RPE2: rickettsial palindromic element RPE2 domain 100 134 4.0E-23 T 25-04-2016 IPR022436 Rickettsia palindromic element RPE2 RJP_RS06740 5c6c318a20d384002cfae9aedfdcea3c 211 ProDom PD209763 TRANSMEMBRANE RP854 MEMBRANE 1 211 6.0E-106 T 25-04-2016 IPR020135 Uncharacterised protein family RP854 RJP_RS05325 bc0d8ff648d2bf130e2489d1ab80ed97 295 Pfam PF13624 SurA N-terminal domain 4 133 1.4E-14 T 25-04-2016 RJP_RS05325 bc0d8ff648d2bf130e2489d1ab80ed97 295 SUPERFAMILY SSF109998 22 181 1.26E-24 T 25-04-2016 IPR027304 Trigger factor/SurA domain RJP_RS02555 c2cab79beec0cceed44d837304ca8ee4 876 Pfam PF13502 AsmA-like C-terminal region 625 850 8.5E-20 T 25-04-2016 IPR032712 AsmA-like, C-terminal RJP_RS04075 b4a05eb091de306a882dc74e627662b9 139 PANTHER PTHR33221:SF1 2 131 2.8E-38 T 25-04-2016 RJP_RS04075 b4a05eb091de306a882dc74e627662b9 139 SUPERFAMILY SSF46785 2 134 5.45E-30 T 25-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RJP_RS04075 b4a05eb091de306a882dc74e627662b9 139 Pfam PF02082 Transcriptional regulator 1 83 9.2E-24 T 25-04-2016 IPR000944 Transcription regulator Rrf2-type RJP_RS04075 b4a05eb091de306a882dc74e627662b9 139 Gene3D G3DSA:1.10.10.10 1 134 1.5E-27 T 25-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RJP_RS04075 b4a05eb091de306a882dc74e627662b9 139 TIGRFAM TIGR00738 rrf2_super: Rrf2 family protein 1 132 6.9E-36 T 25-04-2016 IPR000944 Transcription regulator Rrf2-type RJP_RS04075 b4a05eb091de306a882dc74e627662b9 139 PANTHER PTHR33221 2 131 2.8E-38 T 25-04-2016 RJP_RS06055 f87321a753c137badb8865914aad319e 81 PANTHER PTHR20863 1 76 1.1E-17 T 25-04-2016 RJP_RS06055 f87321a753c137badb8865914aad319e 81 Hamap MF_01217 Acyl carrier protein [acpP]. 6 80 19.928 T 25-04-2016 IPR003231 Acyl carrier protein (ACP) GO:0006633 UniPathway: UPA00094 RJP_RS06055 f87321a753c137badb8865914aad319e 81 ProDom PD000887 CARRIER ACYL PHOSPHOPANTETHEINE ACP ACID FATTY BIOSYNTHESIS LIPID SYNTHESIS CHLOROPLAST 38 78 9.0E-16 T 25-04-2016 IPR003231 Acyl carrier protein (ACP) GO:0006633 UniPathway: UPA00094 RJP_RS06055 f87321a753c137badb8865914aad319e 81 Pfam PF00550 Phosphopantetheine attachment site 9 76 8.0E-13 T 25-04-2016 IPR009081 Phosphopantetheine binding ACP domain RJP_RS06055 f87321a753c137badb8865914aad319e 81 Gene3D G3DSA:1.10.1200.10 3 80 1.1E-27 T 25-04-2016 IPR009081 Phosphopantetheine binding ACP domain RJP_RS06055 f87321a753c137badb8865914aad319e 81 TIGRFAM TIGR00517 acyl_carrier: acyl carrier protein 5 80 4.8E-34 T 25-04-2016 IPR003231 Acyl carrier protein (ACP) GO:0006633 UniPathway: UPA00094 RJP_RS06055 f87321a753c137badb8865914aad319e 81 SUPERFAMILY SSF47336 4 80 2.49E-21 T 25-04-2016 IPR009081 Phosphopantetheine binding ACP domain RJP_RS02050 88116d15a21bd7a797183d9f01d985bf 366 PANTHER PTHR30474:SF1 1 360 8.0E-129 T 25-04-2016 IPR011923 Rod shape-determining protein RodA GO:0008360|GO:0016021 RJP_RS02050 88116d15a21bd7a797183d9f01d985bf 366 TIGRFAM TIGR02210 rodA_shape: rod shape-determining protein RodA 14 360 5.6E-125 T 25-04-2016 IPR011923 Rod shape-determining protein RodA GO:0008360|GO:0016021 RJP_RS02050 88116d15a21bd7a797183d9f01d985bf 366 PANTHER PTHR30474 1 360 8.0E-129 T 25-04-2016 IPR001182 Cell cycle protein FtsW/RodA GO:0016021|GO:0051301 RJP_RS02050 88116d15a21bd7a797183d9f01d985bf 366 Pfam PF01098 Cell cycle protein 16 360 2.9E-97 T 25-04-2016 IPR001182 Cell cycle protein FtsW/RodA GO:0016021|GO:0051301 RJP_RS05950 d2c34f66ad4186f4826ed3daa1711cd1 86 Hamap MF_00539 50S ribosomal protein L27 [rpmA]. 1 83 27.149 T 25-04-2016 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RJP_RS05950 d2c34f66ad4186f4826ed3daa1711cd1 86 PRINTS PR00063 Ribosomal protein L27 signature 54 78 4.9E-37 T 25-04-2016 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RJP_RS05950 d2c34f66ad4186f4826ed3daa1711cd1 86 PRINTS PR00063 Ribosomal protein L27 signature 4 28 4.9E-37 T 25-04-2016 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RJP_RS05950 d2c34f66ad4186f4826ed3daa1711cd1 86 PRINTS PR00063 Ribosomal protein L27 signature 29 53 4.9E-37 T 25-04-2016 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RJP_RS05950 d2c34f66ad4186f4826ed3daa1711cd1 86 Pfam PF01016 Ribosomal L27 protein 2 80 1.5E-38 T 25-04-2016 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RJP_RS05950 d2c34f66ad4186f4826ed3daa1711cd1 86 Gene3D G3DSA:2.40.50.100 20 80 2.7E-31 T 25-04-2016 RJP_RS05950 d2c34f66ad4186f4826ed3daa1711cd1 86 TIGRFAM TIGR00062 L27: ribosomal protein bL27 1 80 1.2E-37 T 25-04-2016 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RJP_RS05950 d2c34f66ad4186f4826ed3daa1711cd1 86 PANTHER PTHR15893 1 80 9.4E-47 T 25-04-2016 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RJP_RS05950 d2c34f66ad4186f4826ed3daa1711cd1 86 ProSitePatterns PS00831 Ribosomal protein L27 signature. 34 48 - T 25-04-2016 IPR018261 Ribosomal protein L27, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 RJP_RS05950 d2c34f66ad4186f4826ed3daa1711cd1 86 SUPERFAMILY SSF110324 2 80 2.97E-34 T 25-04-2016 RJP_RS05950 d2c34f66ad4186f4826ed3daa1711cd1 86 ProDom PD003114 RIBOSOMAL L27 50S RIBONUCLEOPROTEIN CHLOROPLAST MITOCHONDRIAL PEPTIDE 60S TRANSIT PRECURSOR 28 69 3.0E-18 T 25-04-2016 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RJP_RS06955 3caa005eeb02c76d0b9d54a3c1d909d8 423 SUPERFAMILY SSF103473 5 409 1.57E-53 T 25-04-2016 IPR020846 Major facilitator superfamily domain RJP_RS06955 3caa005eeb02c76d0b9d54a3c1d909d8 423 Pfam PF07690 Major Facilitator Superfamily 16 370 6.4E-24 T 25-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 RJP_RS06955 3caa005eeb02c76d0b9d54a3c1d909d8 423 PANTHER PTHR23508 7 420 4.3E-104 T 25-04-2016 RJP_RS06955 3caa005eeb02c76d0b9d54a3c1d909d8 423 Gene3D G3DSA:1.20.1250.20 10 212 1.9E-17 T 25-04-2016 RJP_RS06955 3caa005eeb02c76d0b9d54a3c1d909d8 423 Gene3D G3DSA:1.20.1250.20 228 409 6.1E-16 T 25-04-2016 RJP_RS06955 3caa005eeb02c76d0b9d54a3c1d909d8 423 PANTHER PTHR23508:SF1 7 420 4.3E-104 T 25-04-2016 RJP_RS01005 561fa81803535f1c9f23bb420cb6df12 500 Gene3D G3DSA:3.40.220.10 8 155 7.4E-17 T 25-04-2016 RJP_RS01005 561fa81803535f1c9f23bb420cb6df12 500 PANTHER PTHR11963 23 500 6.0E-181 T 25-04-2016 RJP_RS01005 561fa81803535f1c9f23bb420cb6df12 500 Hamap MF_00181 Probable cytosol aminopeptidase [pepA]. 2 500 36.976 T 25-04-2016 IPR023042 Peptidase M17, leucine aminopeptidase KEGG: 00480+3.4.11.1 RJP_RS01005 561fa81803535f1c9f23bb420cb6df12 500 PANTHER PTHR11963:SF13 23 500 6.0E-181 T 25-04-2016 RJP_RS01005 561fa81803535f1c9f23bb420cb6df12 500 SUPERFAMILY SSF52949 4 182 4.36E-27 T 25-04-2016 RJP_RS01005 561fa81803535f1c9f23bb420cb6df12 500 Pfam PF00883 Cytosol aminopeptidase family, catalytic domain 184 492 2.3E-118 T 25-04-2016 IPR000819 Peptidase M17, leucyl aminopeptidase, C-terminal GO:0004177|GO:0005622|GO:0006508 KEGG: 00480+3.4.11.1 RJP_RS01005 561fa81803535f1c9f23bb420cb6df12 500 ProSitePatterns PS00631 Cytosol aminopeptidase signature. 345 352 - T 25-04-2016 IPR000819 Peptidase M17, leucyl aminopeptidase, C-terminal GO:0004177|GO:0005622|GO:0006508 KEGG: 00480+3.4.11.1 RJP_RS01005 561fa81803535f1c9f23bb420cb6df12 500 SUPERFAMILY SSF53187 178 498 2.37E-120 T 25-04-2016 RJP_RS01005 561fa81803535f1c9f23bb420cb6df12 500 PRINTS PR00481 Cytosol aminopeptidase signature 319 340 8.6E-54 T 25-04-2016 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 RJP_RS01005 561fa81803535f1c9f23bb420cb6df12 500 PRINTS PR00481 Cytosol aminopeptidase signature 282 303 8.6E-54 T 25-04-2016 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 RJP_RS01005 561fa81803535f1c9f23bb420cb6df12 500 PRINTS PR00481 Cytosol aminopeptidase signature 370 385 8.6E-54 T 25-04-2016 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 RJP_RS01005 561fa81803535f1c9f23bb420cb6df12 500 PRINTS PR00481 Cytosol aminopeptidase signature 341 361 8.6E-54 T 25-04-2016 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 RJP_RS01005 561fa81803535f1c9f23bb420cb6df12 500 PRINTS PR00481 Cytosol aminopeptidase signature 260 277 8.6E-54 T 25-04-2016 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 RJP_RS01005 561fa81803535f1c9f23bb420cb6df12 500 Gene3D G3DSA:3.40.630.10 175 498 3.3E-133 T 25-04-2016 RJP_RS01005 561fa81803535f1c9f23bb420cb6df12 500 Pfam PF02789 Cytosol aminopeptidase family, N-terminal domain 18 146 1.3E-26 T 25-04-2016 IPR008283 Peptidase M17, leucyl aminopeptidase, N-terminal GO:0004177|GO:0005622|GO:0006508 KEGG: 00480+3.4.11.1 RJP_RS03180 4f6b4c883940c36bb68f3ffc1dd14a27 92 SUPERFAMILY SSF81342 5 78 1.1E-12 T 25-04-2016 IPR016174 Di-haem cytochrome, transmembrane GO:0016020|GO:0022904 RJP_RS03180 4f6b4c883940c36bb68f3ffc1dd14a27 92 Gene3D G3DSA:1.20.950.20 10 84 7.5E-5 T 25-04-2016 RJP_RS03180 4f6b4c883940c36bb68f3ffc1dd14a27 92 Pfam PF01292 Prokaryotic cytochrome b561 10 69 2.4E-10 T 25-04-2016 IPR011577 Cytochrome b561, bacterial/Ni-hydrogenase GO:0009055|GO:0016021 RJP_RS03180 4f6b4c883940c36bb68f3ffc1dd14a27 92 PANTHER PTHR30529 2 87 1.6E-17 T 25-04-2016 RJP_RS05475 e23a894a3b8b61408c7da6e2f34eeecc 265 Pfam PF04991 LicD family 71 121 1.5E-17 T 25-04-2016 IPR007074 LicD family RJP_RS05475 e23a894a3b8b61408c7da6e2f34eeecc 265 PANTHER PTHR13627 51 199 3.3E-22 T 25-04-2016 RJP_RS02535 849936771473085cd0cb69fdb851eb8e 71 Pfam PF14328 Domain of unknown function (DUF4385) 17 68 5.8E-21 T 25-04-2016 IPR025494 Protein of unknown function DUF4385 RJP_RS00790 20ecc05b0d1c6d9b939b6d106ef0070c 671 Pfam PF04610 TrbL/VirB6 plasmid conjugal transfer protein 406 495 9.9E-13 T 25-04-2016 IPR007688 Plasmid conjugal transfer TrbL/VirB6 GO:0030255 RJP_RS00650 eb3a02bcf45d9f387f18d0f952aad9e9 295 SUPERFAMILY SSF52313 9 236 1.19E-89 T 25-04-2016 IPR023591 Ribosomal protein S2, flavodoxin-like domain RJP_RS00650 eb3a02bcf45d9f387f18d0f952aad9e9 295 Hamap MF_00291_B 30S ribosomal protein S2 [rpsB]. 5 229 38.689 T 25-04-2016 IPR005706 Ribosomal protein S2, bacteria/mitochondria/plastid GO:0003735|GO:0006412|GO:0015935 RJP_RS00650 eb3a02bcf45d9f387f18d0f952aad9e9 295 Pfam PF00318 Ribosomal protein S2 12 228 3.6E-90 T 25-04-2016 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RJP_RS00650 eb3a02bcf45d9f387f18d0f952aad9e9 295 PANTHER PTHR12534 7 273 3.1E-108 T 25-04-2016 IPR005706 Ribosomal protein S2, bacteria/mitochondria/plastid GO:0003735|GO:0006412|GO:0015935 RJP_RS00650 eb3a02bcf45d9f387f18d0f952aad9e9 295 ProSitePatterns PS00962 Ribosomal protein S2 signature 1. 9 20 - T 25-04-2016 IPR018130 Ribosomal protein S2, conserved site GO:0003735|GO:0005840|GO:0006412 RJP_RS00650 eb3a02bcf45d9f387f18d0f952aad9e9 295 Gene3D G3DSA:3.40.50.10490 26 102 6.0E-65 T 25-04-2016 RJP_RS00650 eb3a02bcf45d9f387f18d0f952aad9e9 295 Gene3D G3DSA:3.40.50.10490 162 249 6.0E-65 T 25-04-2016 RJP_RS00650 eb3a02bcf45d9f387f18d0f952aad9e9 295 Gene3D G3DSA:1.10.287.610 103 156 6.3E-17 T 25-04-2016 RJP_RS00650 eb3a02bcf45d9f387f18d0f952aad9e9 295 PRINTS PR00395 Ribosomal protein S2 signature 162 179 1.9E-39 T 25-04-2016 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RJP_RS00650 eb3a02bcf45d9f387f18d0f952aad9e9 295 PRINTS PR00395 Ribosomal protein S2 signature 90 107 1.9E-39 T 25-04-2016 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RJP_RS00650 eb3a02bcf45d9f387f18d0f952aad9e9 295 PRINTS PR00395 Ribosomal protein S2 signature 9 27 1.9E-39 T 25-04-2016 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RJP_RS00650 eb3a02bcf45d9f387f18d0f952aad9e9 295 PRINTS PR00395 Ribosomal protein S2 signature 200 214 1.9E-39 T 25-04-2016 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RJP_RS00650 eb3a02bcf45d9f387f18d0f952aad9e9 295 PRINTS PR00395 Ribosomal protein S2 signature 40 49 1.9E-39 T 25-04-2016 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RJP_RS00650 eb3a02bcf45d9f387f18d0f952aad9e9 295 PRINTS PR00395 Ribosomal protein S2 signature 179 190 1.9E-39 T 25-04-2016 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RJP_RS00650 eb3a02bcf45d9f387f18d0f952aad9e9 295 TIGRFAM TIGR01011 rpsB_bact: ribosomal protein uS2 7 230 5.4E-102 T 25-04-2016 IPR005706 Ribosomal protein S2, bacteria/mitochondria/plastid GO:0003735|GO:0006412|GO:0015935 RJP_RS00650 eb3a02bcf45d9f387f18d0f952aad9e9 295 ProSitePatterns PS00963 Ribosomal protein S2 signature 2. 162 186 - T 25-04-2016 IPR018130 Ribosomal protein S2, conserved site GO:0003735|GO:0005840|GO:0006412 RJP_RS00960 ac6c6fbd9de28fbecb3129193cfeb91f 66 Gene3D G3DSA:1.20.5.1030 6 62 2.7E-22 T 25-04-2016 RJP_RS00960 ac6c6fbd9de28fbecb3129193cfeb91f 66 Pfam PF00584 SecE/Sec61-gamma subunits of protein translocation complex 9 61 1.8E-18 T 25-04-2016 IPR001901 Protein translocase complex, SecE/Sec61-gamma subunit GO:0006605|GO:0006886|GO:0016020 RJP_RS00960 ac6c6fbd9de28fbecb3129193cfeb91f 66 ProSitePatterns PS01067 Protein secE/sec61-gamma signature. 10 38 - T 25-04-2016 IPR001901 Protein translocase complex, SecE/Sec61-gamma subunit GO:0006605|GO:0006886|GO:0016020 RJP_RS00960 ac6c6fbd9de28fbecb3129193cfeb91f 66 PANTHER PTHR33910:SF1 5 65 4.8E-15 T 25-04-2016 RJP_RS00960 ac6c6fbd9de28fbecb3129193cfeb91f 66 PANTHER PTHR33910 5 65 4.8E-15 T 25-04-2016 RJP_RS00960 ac6c6fbd9de28fbecb3129193cfeb91f 66 TIGRFAM TIGR00964 secE_bact: preprotein translocase, SecE subunit 7 62 6.5E-21 T 25-04-2016 IPR005807 SecE subunit of protein translocation complex GO:0009306|GO:0015450|GO:0016021 RJP_RS00960 ac6c6fbd9de28fbecb3129193cfeb91f 66 Hamap MF_00422 Protein translocase subunit SecE [secE]. 5 60 12.522 T 25-04-2016 IPR022943 Preprotein translocase subunit SecE RJP_RS05845 62f5897f1f21ca5776eccbc675fbaca5 184 Pfam PF00293 NUDIX domain 45 162 3.0E-11 T 25-04-2016 IPR000086 NUDIX hydrolase domain GO:0016787 RJP_RS05845 62f5897f1f21ca5776eccbc675fbaca5 184 Gene3D G3DSA:3.90.79.10 45 177 2.0E-17 T 25-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 RJP_RS05845 62f5897f1f21ca5776eccbc675fbaca5 184 SUPERFAMILY SSF55811 38 175 2.66E-16 T 25-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 RJP_RS02815 c28625dc9c32cd5a89d7da7935b7cd3a 528 SUPERFAMILY SSF81442 9 524 1.83E-39 T 25-04-2016 IPR023616 Cytochrome c oxidase, subunit I domain GO:0004129|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 RJP_RS02815 c28625dc9c32cd5a89d7da7935b7cd3a 528 Pfam PF00115 Cytochrome C and Quinol oxidase polypeptide I 20 502 4.3E-11 T 25-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 RJP_RS01470 e54a09f47e8128b85055285888df4561 71 Gene3D G3DSA:1.10.10.600 1 64 1.4E-17 T 25-04-2016 IPR007479 ISC system FeS cluster assembly, IscX GO:0016226 RJP_RS01470 e54a09f47e8128b85055285888df4561 71 Pfam PF04384 Iron-sulphur cluster assembly 1 62 8.6E-16 T 25-04-2016 IPR007479 ISC system FeS cluster assembly, IscX GO:0016226 RJP_RS01470 e54a09f47e8128b85055285888df4561 71 SUPERFAMILY SSF140319 1 62 6.54E-14 T 25-04-2016 IPR007479 ISC system FeS cluster assembly, IscX GO:0016226 RJP_RS04340 7746876cbb9662423959f8e40cf16970 121 Gene3D G3DSA:3.40.50.2020 5 90 1.0E-10 T 25-04-2016 IPR029057 Phosphoribosyltransferase-like RJP_RS04340 7746876cbb9662423959f8e40cf16970 121 SUPERFAMILY SSF53271 3 90 1.24E-12 T 25-04-2016 IPR029057 Phosphoribosyltransferase-like RJP_RS02185 74c2194214068ec8afc09c0c33511b68 230 Pfam PF01863 Protein of unknown function DUF45 25 221 8.3E-46 T 25-04-2016 IPR002725 Protein of unknown function DUF45 RJP_RS02185 74c2194214068ec8afc09c0c33511b68 230 PANTHER PTHR30399:SF3 5 228 6.4E-37 T 25-04-2016 RJP_RS02185 74c2194214068ec8afc09c0c33511b68 230 PANTHER PTHR30399 5 228 6.4E-37 T 25-04-2016 RJP_RS01160 beda996d6b7a5dd886a0248958c2dbc1 110 Gene3D G3DSA:4.10.520.10 12 110 2.6E-31 T 25-04-2016 IPR010992 Integration host factor (IHF)-like DNA-binding domain GO:0003677 RJP_RS01160 beda996d6b7a5dd886a0248958c2dbc1 110 SMART SM00411 12 110 1.3E-39 T 25-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 RJP_RS01160 beda996d6b7a5dd886a0248958c2dbc1 110 PANTHER PTHR33175 12 110 1.1E-28 T 25-04-2016 RJP_RS01160 beda996d6b7a5dd886a0248958c2dbc1 110 SUPERFAMILY SSF47729 12 110 5.74E-24 T 25-04-2016 IPR010992 Integration host factor (IHF)-like DNA-binding domain GO:0003677 RJP_RS01160 beda996d6b7a5dd886a0248958c2dbc1 110 Pfam PF00216 Bacterial DNA-binding protein 12 110 8.9E-26 T 25-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 RJP_RS01160 beda996d6b7a5dd886a0248958c2dbc1 110 ProSitePatterns PS00045 Bacterial histone-like DNA-binding proteins signature. 66 85 - T 25-04-2016 IPR020816 Histone-like DNA-binding protein, conserved site GO:0003677 RJP_RS01160 beda996d6b7a5dd886a0248958c2dbc1 110 PRINTS PR01727 Prokaryotic integration host factor signature 94 108 1.17E-14 T 25-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 RJP_RS01160 beda996d6b7a5dd886a0248958c2dbc1 110 PRINTS PR01727 Prokaryotic integration host factor signature 78 91 1.17E-14 T 25-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 RJP_RS01160 beda996d6b7a5dd886a0248958c2dbc1 110 PRINTS PR01727 Prokaryotic integration host factor signature 60 75 1.17E-14 T 25-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 RJP_RS06525 20a89b15c9f0fb554a86187857ff1234 107 PIRSF PIRSF007061 1 107 2.2E-67 T 25-04-2016 IPR016507 Uncharacterised conserved protein UCP007061 RJP_RS06525 20a89b15c9f0fb554a86187857ff1234 107 Pfam PF05258 Protein of unknown function (DUF721) 10 97 3.2E-10 T 25-04-2016 IPR007922 Protein of unknown function DUF721/UPF0232 RJP_RS03165 77c8851bdc85f4b329e94eec20375b36 94 SUPERFAMILY SSF88723 1 76 5.89E-9 T 25-04-2016 IPR029060 PIN domain-like RJP_RS02430 c4f445f209b7fb659fbe8b77b6b93707 311 PANTHER PTHR10264:SF82 1 303 5.1E-216 T 25-04-2016 RJP_RS02430 c4f445f209b7fb659fbe8b77b6b93707 311 SMART SM00244 18 176 9.3E-62 T 25-04-2016 IPR001107 Band 7 domain RJP_RS02430 c4f445f209b7fb659fbe8b77b6b93707 311 Pfam PF01145 SPFH domain / Band 7 family 22 194 5.7E-27 T 25-04-2016 IPR001107 Band 7 domain RJP_RS02430 c4f445f209b7fb659fbe8b77b6b93707 311 PRINTS PR00721 Stomatin signature 73 94 1.6E-26 T 25-04-2016 IPR001972 Stomatin family GO:0016020 RJP_RS02430 c4f445f209b7fb659fbe8b77b6b93707 311 PRINTS PR00721 Stomatin signature 128 151 1.6E-26 T 25-04-2016 IPR001972 Stomatin family GO:0016020 RJP_RS02430 c4f445f209b7fb659fbe8b77b6b93707 311 PRINTS PR00721 Stomatin signature 25 47 1.6E-26 T 25-04-2016 IPR001972 Stomatin family GO:0016020 RJP_RS02430 c4f445f209b7fb659fbe8b77b6b93707 311 PRINTS PR00721 Stomatin signature 171 192 1.6E-26 T 25-04-2016 IPR001972 Stomatin family GO:0016020 RJP_RS02430 c4f445f209b7fb659fbe8b77b6b93707 311 PRINTS PR00721 Stomatin signature 108 125 1.6E-26 T 25-04-2016 IPR001972 Stomatin family GO:0016020 RJP_RS02430 c4f445f209b7fb659fbe8b77b6b93707 311 PRINTS PR00721 Stomatin signature 152 170 1.6E-26 T 25-04-2016 IPR001972 Stomatin family GO:0016020 RJP_RS02430 c4f445f209b7fb659fbe8b77b6b93707 311 Pfam PF16200 C-terminal region of band_7 242 302 4.8E-26 T 25-04-2016 IPR032435 Band 7, C-terminal extension RJP_RS02430 c4f445f209b7fb659fbe8b77b6b93707 311 SUPERFAMILY SSF117892 49 183 1.44E-37 T 25-04-2016 IPR001107 Band 7 domain RJP_RS02430 c4f445f209b7fb659fbe8b77b6b93707 311 PANTHER PTHR10264 1 303 5.1E-216 T 25-04-2016 IPR001972 Stomatin family GO:0016020 RJP_RS00190 16155dec71c81acb49108cd81812ed36 87 Pfam PF09527 Putative F0F1-ATPase subunit Ca2+/Mg2+ transporter 34 77 2.8E-11 T 25-04-2016 IPR032820 Putative F0F1-ATPase subunit, Ca2+/Mg2+ transporter RJP_RS01120 0cbe896f8b197b5cd1d0204c532a5bc0 227 Gene3D G3DSA:3.40.50.150 13 227 3.1E-66 T 25-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RJP_RS01120 0cbe896f8b197b5cd1d0204c532a5bc0 227 Hamap MF_01547 Ribosomal RNA large subunit methyltransferase E [rlmE]. 26 226 29.197 T 25-04-2016 IPR015507 Ribosomal RNA large subunit methyltransferase E GO:0001510|GO:0008168 KEGG: 00564+2.1.1.16 RJP_RS01120 0cbe896f8b197b5cd1d0204c532a5bc0 227 SUPERFAMILY SSF53335 11 226 1.07E-37 T 25-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RJP_RS01120 0cbe896f8b197b5cd1d0204c532a5bc0 227 PANTHER PTHR10920 15 227 6.6E-119 T 25-04-2016 IPR015507 Ribosomal RNA large subunit methyltransferase E GO:0001510|GO:0008168 KEGG: 00564+2.1.1.16 RJP_RS01120 0cbe896f8b197b5cd1d0204c532a5bc0 227 Pfam PF01728 FtsJ-like methyltransferase 46 226 1.5E-56 T 25-04-2016 IPR002877 Ribosomal RNA methyltransferase FtsJ domain GO:0008168|GO:0032259 RJP_RS01120 0cbe896f8b197b5cd1d0204c532a5bc0 227 PANTHER PTHR10920:SF20 15 227 6.6E-119 T 25-04-2016 RJP_RS01120 0cbe896f8b197b5cd1d0204c532a5bc0 227 PIRSF PIRSF005461 11 227 4.7E-79 T 25-04-2016 IPR015507 Ribosomal RNA large subunit methyltransferase E GO:0001510|GO:0008168 KEGG: 00564+2.1.1.16 RJP_RS00445 40cdade1fef265d05650affdd5c52514 185 Gene3D G3DSA:3.40.1050.10 34 156 2.5E-6 T 25-04-2016 IPR001765 Carbonic anhydrase GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 RJP_RS00445 40cdade1fef265d05650affdd5c52514 185 SUPERFAMILY SSF53056 40 170 1.07E-9 T 25-04-2016 IPR001765 Carbonic anhydrase GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 RJP_RS03880 eca864cb9ab2972ef2acd7a34e2b3f8a 227 Gene3D G3DSA:1.25.40.20 169 224 4.2E-8 T 25-04-2016 IPR020683 Ankyrin repeat-containing domain RJP_RS03880 eca864cb9ab2972ef2acd7a34e2b3f8a 227 Gene3D G3DSA:1.25.40.20 4 20 4.2E-8 T 25-04-2016 IPR020683 Ankyrin repeat-containing domain RJP_RS03880 eca864cb9ab2972ef2acd7a34e2b3f8a 227 SUPERFAMILY SSF48403 129 224 8.01E-8 T 25-04-2016 IPR020683 Ankyrin repeat-containing domain RJP_RS01630 e9a2af2cf2b162d7ca9ed26f9cd67dca 115 ProDom PD200507 RP222 1 113 4.0E-60 T 25-04-2016 IPR022589 Protein of unknown function DUF2660 RJP_RS01630 e9a2af2cf2b162d7ca9ed26f9cd67dca 115 Pfam PF10859 Protein of unknown function (DUF2660) 1 86 3.7E-48 T 25-04-2016 IPR022589 Protein of unknown function DUF2660 RJP_RS02390 38f3f4008b992a7d0251e0b6ea064b89 48 TIGRFAM TIGR03776 RPE5: rickettsial palindromic element RPE5 domain 1 42 4.3E-25 T 25-04-2016 IPR022438 Rickettsia palindromic element RPE5 RJP_RS02910 2262649e91d49c16d1960dbd1d622c45 304 Gene3D G3DSA:3.90.226.10 36 150 3.9E-39 T 25-04-2016 IPR029045 ClpP/crotonase-like domain RJP_RS02910 2262649e91d49c16d1960dbd1d622c45 304 Gene3D G3DSA:3.90.226.10 219 253 3.9E-39 T 25-04-2016 IPR029045 ClpP/crotonase-like domain RJP_RS02910 2262649e91d49c16d1960dbd1d622c45 304 SUPERFAMILY SSF52096 183 244 7.19E-37 T 25-04-2016 IPR029045 ClpP/crotonase-like domain RJP_RS02910 2262649e91d49c16d1960dbd1d622c45 304 SUPERFAMILY SSF52096 36 154 7.19E-37 T 25-04-2016 IPR029045 ClpP/crotonase-like domain RJP_RS02910 2262649e91d49c16d1960dbd1d622c45 304 Pfam PF01343 Peptidase family S49 107 251 6.0E-31 T 25-04-2016 IPR002142 Peptidase S49 GO:0006508|GO:0008233 RJP_RS02910 2262649e91d49c16d1960dbd1d622c45 304 PANTHER PTHR30341 14 303 1.6E-74 T 25-04-2016 RJP_RS02910 2262649e91d49c16d1960dbd1d622c45 304 PANTHER PTHR30341:SF1 14 303 1.6E-74 T 25-04-2016 RJP_RS02740 bb1f042692e79a808313aa236b1bf01e 405 SUPERFAMILY SSF103473 5 399 7.19E-36 T 25-04-2016 IPR020846 Major facilitator superfamily domain RJP_RS02740 bb1f042692e79a808313aa236b1bf01e 405 PANTHER PTHR23508 5 400 5.7E-43 T 25-04-2016 RJP_RS02740 bb1f042692e79a808313aa236b1bf01e 405 Pfam PF07690 Major Facilitator Superfamily 10 355 1.2E-16 T 25-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 RJP_RS02740 bb1f042692e79a808313aa236b1bf01e 405 Gene3D G3DSA:1.20.1250.20 221 399 2.0E-6 T 25-04-2016 RJP_RS02740 bb1f042692e79a808313aa236b1bf01e 405 Gene3D G3DSA:1.20.1250.20 5 200 3.5E-14 T 25-04-2016 RJP_RS01940 403d74164b99a64649d16414716f650f 167 SUPERFAMILY SSF49764 57 165 3.19E-22 T 25-04-2016 IPR008978 HSP20-like chaperone RJP_RS01940 403d74164b99a64649d16414716f650f 167 Gene3D G3DSA:2.60.40.790 62 164 6.7E-21 T 25-04-2016 IPR008978 HSP20-like chaperone RJP_RS01940 403d74164b99a64649d16414716f650f 167 PANTHER PTHR11527 61 167 7.0E-19 T 25-04-2016 IPR031107 Small heat shock protein HSP20 RJP_RS01940 403d74164b99a64649d16414716f650f 167 Pfam PF00011 Hsp20/alpha crystallin family 72 166 3.7E-19 T 25-04-2016 IPR002068 Alpha crystallin/Hsp20 domain RJP_RS02470 40f57344d56228e2a3020bcc177c9d70 445 SUPERFAMILY SSF53756 71 409 4.0E-8 T 25-04-2016 RJP_RS01510 f5c02d79fe95ffa69b6af66468cf0fb6 350 PANTHER PTHR12169 46 343 1.7E-84 T 25-04-2016 IPR005654 ATPase, AFG1-like GO:0005524 RJP_RS01510 f5c02d79fe95ffa69b6af66468cf0fb6 350 SUPERFAMILY SSF52540 34 168 7.62E-19 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RJP_RS01510 f5c02d79fe95ffa69b6af66468cf0fb6 350 Gene3D G3DSA:3.40.50.300 29 169 2.2E-23 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RJP_RS01510 f5c02d79fe95ffa69b6af66468cf0fb6 350 Pfam PF03969 AFG1-like ATPase 15 343 7.7E-81 T 25-04-2016 IPR005654 ATPase, AFG1-like GO:0005524 RJP_RS05810 d136f55c71c13d99e357864fcc12c9ba 156 SUPERFAMILY SSF52540 118 156 4.62E-9 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RJP_RS05810 d136f55c71c13d99e357864fcc12c9ba 156 SUPERFAMILY SSF52540 39 90 4.62E-9 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RJP_RS05810 d136f55c71c13d99e357864fcc12c9ba 156 Gene3D G3DSA:3.40.50.300 108 156 1.6E-7 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RJP_RS00245 dffb6dc577d7fc54b33862dc2b5cb953 127 SUPERFAMILY SSF81901 35 107 2.09E-6 T 25-04-2016 RJP_RS00245 dffb6dc577d7fc54b33862dc2b5cb953 127 ProDom PD519226 RC0040 1 105 2.0E-53 T 25-04-2016 RJP_RS00245 dffb6dc577d7fc54b33862dc2b5cb953 127 Gene3D G3DSA:1.25.40.10 35 113 4.1E-7 T 25-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 RJP_RS04010 e41427324a7d30efd477fc656019997b 501 PANTHER PTHR31187 9 499 1.2E-123 T 25-04-2016 IPR004667 ADP/ATP carrier protein GO:0005471|GO:0005524|GO:0006810|GO:0016021 RJP_RS04010 e41427324a7d30efd477fc656019997b 501 PANTHER PTHR31187:SF1 9 499 1.2E-123 T 25-04-2016 RJP_RS04010 e41427324a7d30efd477fc656019997b 501 Pfam PF03219 TLC ATP/ADP transporter 6 496 5.2E-202 T 25-04-2016 IPR004667 ADP/ATP carrier protein GO:0005471|GO:0005524|GO:0006810|GO:0016021 RJP_RS04010 e41427324a7d30efd477fc656019997b 501 TIGRFAM TIGR00769 AAA: ADP/ATP carrier protein family 18 496 1.4E-143 T 25-04-2016 IPR004667 ADP/ATP carrier protein GO:0005471|GO:0005524|GO:0006810|GO:0016021 RJP_RS06780 34c194ce5ffdbce1a066d538d9306bd2 132 PANTHER PTHR10160 48 131 4.5E-34 T 25-04-2016 RJP_RS06780 34c194ce5ffdbce1a066d538d9306bd2 132 Pfam PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch 48 131 2.9E-35 T 25-04-2016 IPR024605 NAD(P) transhydrogenase, alpha subunit, C-terminal KEGG: 00760+1.6.1.2 RJP_RS00915 ab287691709428eda2b555e78db42b4a 247 PANTHER PTHR22778:SF21 2 234 2.3E-69 T 25-04-2016 RJP_RS00915 ab287691709428eda2b555e78db42b4a 247 PANTHER PTHR22778 2 234 2.3E-69 T 25-04-2016 RJP_RS00915 ab287691709428eda2b555e78db42b4a 247 Gene3D G3DSA:3.40.250.10 100 227 4.9E-39 T 25-04-2016 IPR001763 Rhodanese-like domain RJP_RS00915 ab287691709428eda2b555e78db42b4a 247 Hamap MF_00469 UPF0176 protein YceA [yceA]. 3 243 38.386 T 25-04-2016 IPR020936 Uncharacterised protein family UPF0176 RJP_RS00915 ab287691709428eda2b555e78db42b4a 247 SMART SM00450 114 215 3.6E-19 T 25-04-2016 IPR001763 Rhodanese-like domain RJP_RS00915 ab287691709428eda2b555e78db42b4a 247 Pfam PF00581 Rhodanese-like domain 116 211 8.8E-9 T 25-04-2016 IPR001763 Rhodanese-like domain RJP_RS00915 ab287691709428eda2b555e78db42b4a 247 SUPERFAMILY SSF52821 100 239 4.53E-30 T 25-04-2016 IPR001763 Rhodanese-like domain RJP_RS04300 e99f8e53008604f69438128661bed3f1 71 Pfam PF02371 Transposase IS116/IS110/IS902 family 14 54 7.5E-5 T 25-04-2016 IPR003346 Transposase, IS116/IS110/IS902 GO:0003677|GO:0004803|GO:0006313 RJP_RS03840 bc3b4fd554d7ed8563fc795c0f8e3f9f 226 Gene3D G3DSA:3.40.50.150 5 199 1.6E-23 T 25-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RJP_RS03840 bc3b4fd554d7ed8563fc795c0f8e3f9f 226 Pfam PF08241 Methyltransferase domain 16 98 1.1E-9 T 25-04-2016 IPR013216 Methyltransferase type 11 GO:0008152|GO:0008168 RJP_RS03840 bc3b4fd554d7ed8563fc795c0f8e3f9f 226 SUPERFAMILY SSF53335 7 178 5.51E-19 T 25-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RJP_RS03840 bc3b4fd554d7ed8563fc795c0f8e3f9f 226 PANTHER PTHR13090 2 180 1.8E-30 T 25-04-2016 RJP_RS03840 bc3b4fd554d7ed8563fc795c0f8e3f9f 226 PANTHER PTHR13090:SF1 2 180 1.8E-30 T 25-04-2016 RJP_RS01770 90b3fae5e5b31d87a2fd658457fccdbb 67 ProDom PD195659 RP244 1 55 8.0E-25 T 25-04-2016 RJP_RS06245 5a2fba9cf1a9eba7ccb500b6ca561106 205 PANTHER PTHR33269:SF4 3 194 6.3E-48 T 25-04-2016 RJP_RS06245 5a2fba9cf1a9eba7ccb500b6ca561106 205 Pfam PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 15 163 2.6E-33 T 25-04-2016 IPR001457 NADH:ubiquinone/plastoquinone oxidoreductase, chain 6 GO:0008137|GO:0055114 RJP_RS06245 5a2fba9cf1a9eba7ccb500b6ca561106 205 PANTHER PTHR33269 3 194 6.3E-48 T 25-04-2016 RJP_RS03920 d92f1ddcef8c251d247b997a252e3258 330 TIGRFAM TIGR00233 trpS: tryptophan--tRNA ligase 1 328 4.4E-107 T 25-04-2016 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2|Reactome: REACT_71 RJP_RS03920 d92f1ddcef8c251d247b997a252e3258 330 PANTHER PTHR10055 2 330 1.7E-168 T 25-04-2016 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2|Reactome: REACT_71 RJP_RS03920 d92f1ddcef8c251d247b997a252e3258 330 Gene3D G3DSA:3.40.50.620 3 205 2.7E-88 T 25-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold RJP_RS03920 d92f1ddcef8c251d247b997a252e3258 330 PANTHER PTHR10055:SF10 2 330 1.7E-168 T 25-04-2016 RJP_RS03920 d92f1ddcef8c251d247b997a252e3258 330 SUPERFAMILY SSF52374 4 328 1.34E-94 T 25-04-2016 RJP_RS03920 d92f1ddcef8c251d247b997a252e3258 330 Gene3D G3DSA:1.10.240.10 206 323 1.2E-18 T 25-04-2016 RJP_RS03920 d92f1ddcef8c251d247b997a252e3258 330 Pfam PF00579 tRNA synthetases class I (W and Y) 4 283 3.3E-80 T 25-04-2016 IPR002305 Aminoacyl-tRNA synthetase, class Ic GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 RJP_RS03920 d92f1ddcef8c251d247b997a252e3258 330 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 141 162 1.4E-26 T 25-04-2016 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2|Reactome: REACT_71 RJP_RS03920 d92f1ddcef8c251d247b997a252e3258 330 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 15 31 1.4E-26 T 25-04-2016 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2|Reactome: REACT_71 RJP_RS03920 d92f1ddcef8c251d247b997a252e3258 330 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 195 205 1.4E-26 T 25-04-2016 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2|Reactome: REACT_71 RJP_RS03920 d92f1ddcef8c251d247b997a252e3258 330 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 65 84 1.4E-26 T 25-04-2016 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2|Reactome: REACT_71 RJP_RS03920 d92f1ddcef8c251d247b997a252e3258 330 Hamap MF_00140_B Tryptophan--tRNA ligase [trpS]. 2 329 41.977 T 25-04-2016 IPR024109 Tryptophan-tRNA ligase, bacterial-type GO:0004830 KEGG: 00970+6.1.1.2 RJP_RS02355 28e87fc67fc80df50e1a3ae3c0e95a63 88 Pfam PF12784 PD-(D/E)XK nuclease family transposase 7 86 5.7E-12 T 25-04-2016 RJP_RS05115 37d442d362fb740641eef249acab101b 127 Pfam PF00411 Ribosomal protein S11 17 126 1.8E-37 T 25-04-2016 IPR001971 Ribosomal protein S11 GO:0003735|GO:0005840|GO:0006412 RJP_RS05115 37d442d362fb740641eef249acab101b 127 PIRSF PIRSF002131 1 127 1.9E-46 T 25-04-2016 IPR001971 Ribosomal protein S11 GO:0003735|GO:0005840|GO:0006412 RJP_RS05115 37d442d362fb740641eef249acab101b 127 PANTHER PTHR11759 7 127 4.8E-47 T 25-04-2016 IPR001971 Ribosomal protein S11 GO:0003735|GO:0005840|GO:0006412 RJP_RS05115 37d442d362fb740641eef249acab101b 127 SUPERFAMILY SSF53137 12 127 1.11E-40 T 25-04-2016 RJP_RS05115 37d442d362fb740641eef249acab101b 127 Hamap MF_01310 30S ribosomal protein S11 [rpsK]. 6 127 27.926 T 25-04-2016 IPR001971 Ribosomal protein S11 GO:0003735|GO:0005840|GO:0006412 RJP_RS05115 37d442d362fb740641eef249acab101b 127 TIGRFAM TIGR03632 uS11_bact: ribosomal protein uS11 8 124 4.2E-49 T 25-04-2016 IPR019981 Ribosomal protein S11, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 RJP_RS05115 37d442d362fb740641eef249acab101b 127 Gene3D G3DSA:3.30.420.80 5 127 4.9E-44 T 25-04-2016 IPR001971 Ribosomal protein S11 GO:0003735|GO:0005840|GO:0006412 RJP_RS05115 37d442d362fb740641eef249acab101b 127 ProSitePatterns PS00054 Ribosomal protein S11 signature. 95 117 - T 25-04-2016 IPR018102 Ribosomal S11, conserved site RJP_RS00685 0ecbde1e7d680b77bff5377a6ffbb500 83 PANTHER PTHR33713 1 76 1.8E-15 T 25-04-2016 RJP_RS00685 0ecbde1e7d680b77bff5377a6ffbb500 83 PANTHER PTHR33713:SF6 1 76 1.8E-15 T 25-04-2016 RJP_RS00685 0ecbde1e7d680b77bff5377a6ffbb500 83 Pfam PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system 1 74 2.9E-19 T 25-04-2016 IPR006442 Type II toxin-antitoxin system, antitoxin Phd/YefM RJP_RS00685 0ecbde1e7d680b77bff5377a6ffbb500 83 SUPERFAMILY SSF143120 1 78 2.27E-20 T 25-04-2016 RJP_RS02545 d5d78e0b348025270fe5b11c17a5af49 830 PANTHER PTHR30441 9 751 7.8E-20 T 25-04-2016 RJP_RS02545 d5d78e0b348025270fe5b11c17a5af49 830 Pfam PF05170 AsmA family 1 705 2.6E-184 T 25-04-2016 IPR007844 AsmA RJP_RS06890 21a8fd4adc8dbe232def4123982bcc33 58 Gene3D G3DSA:1.20.1530.10 6 57 9.5E-5 T 25-04-2016 IPR023171 Na/H antiporter domain RJP_RS00900 e47c3a755b47ffdfb9b7fbd900b3d96c 346 PANTHER PTHR10264:SF51 51 118 2.5E-79 T 25-04-2016 IPR010201 HflK GO:0016021 RJP_RS00900 e47c3a755b47ffdfb9b7fbd900b3d96c 346 PANTHER PTHR10264:SF51 140 336 2.5E-79 T 25-04-2016 IPR010201 HflK GO:0016021 RJP_RS00900 e47c3a755b47ffdfb9b7fbd900b3d96c 346 PANTHER PTHR10264 51 118 2.5E-79 T 25-04-2016 IPR001972 Stomatin family GO:0016020 RJP_RS00900 e47c3a755b47ffdfb9b7fbd900b3d96c 346 PANTHER PTHR10264 140 336 2.5E-79 T 25-04-2016 IPR001972 Stomatin family GO:0016020 RJP_RS00900 e47c3a755b47ffdfb9b7fbd900b3d96c 346 SMART SM00244 65 246 1.0E-31 T 25-04-2016 IPR001107 Band 7 domain RJP_RS00900 e47c3a755b47ffdfb9b7fbd900b3d96c 346 SUPERFAMILY SSF117892 140 252 2.88E-16 T 25-04-2016 IPR001107 Band 7 domain RJP_RS00900 e47c3a755b47ffdfb9b7fbd900b3d96c 346 Pfam PF01145 SPFH domain / Band 7 family 69 261 3.8E-25 T 25-04-2016 IPR001107 Band 7 domain RJP_RS00900 e47c3a755b47ffdfb9b7fbd900b3d96c 346 TIGRFAM TIGR01933 hflK: HflK protein 67 336 2.0E-70 T 25-04-2016 IPR010201 HflK GO:0016021 RJP_RS01980 8ca251571e2683fcb2721e085f8f1711 61 Gene3D G3DSA:1.10.260.40 4 54 2.3E-13 T 25-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 RJP_RS01980 8ca251571e2683fcb2721e085f8f1711 61 SUPERFAMILY SSF47413 3 54 1.8E-8 T 25-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 RJP_RS02060 7e9e56353d284ca5f3c4f194426e9ced 512 Pfam PF00361 Proton-conducting membrane transporter 68 341 2.6E-14 T 25-04-2016 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit Reactome: REACT_6305 RJP_RS03105 e521cd93b61e8528b1be7c1407612b22 203 PANTHER PTHR12124 17 202 1.7E-62 T 25-04-2016 RJP_RS03105 e521cd93b61e8528b1be7c1407612b22 203 Pfam PF01612 3'-5' exonuclease 19 168 9.2E-42 T 25-04-2016 IPR002562 3'-5' exonuclease domain GO:0003676|GO:0006139|GO:0008408 RJP_RS03105 e521cd93b61e8528b1be7c1407612b22 203 Gene3D G3DSA:3.30.420.10 17 181 2.8E-24 T 25-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 RJP_RS03105 e521cd93b61e8528b1be7c1407612b22 203 SMART SM00474 1 169 5.7E-45 T 25-04-2016 IPR002562 3'-5' exonuclease domain GO:0003676|GO:0006139|GO:0008408 RJP_RS03105 e521cd93b61e8528b1be7c1407612b22 203 SUPERFAMILY SSF53098 17 191 1.81E-49 T 25-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 RJP_RS03105 e521cd93b61e8528b1be7c1407612b22 203 PANTHER PTHR12124:SF48 17 202 1.7E-62 T 25-04-2016 RJP_RS04000 02df9adba986db022486adb477f0745a 74 SUPERFAMILY SSF53448 5 73 4.22E-13 T 25-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases RJP_RS04000 02df9adba986db022486adb477f0745a 74 Gene3D G3DSA:3.90.550.10 5 73 4.7E-14 T 25-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases RJP_RS04000 02df9adba986db022486adb477f0745a 74 Pfam PF01501 Glycosyl transferase family 8 8 73 2.0E-7 T 25-04-2016 IPR002495 Glycosyl transferase, family 8 GO:0016757 RJP_RS00080 3114e0ae5b730bcc506d545039a42fb2 98 Gene3D G3DSA:1.25.40.20 33 80 5.0E-4 T 25-04-2016 IPR020683 Ankyrin repeat-containing domain RJP_RS01645 8fefb3d55d9ce5d5a1d544aded14d3a8 132 Pfam PF10691 Protein of unknown function (DUF2497) 54 128 4.1E-21 T 25-04-2016 IPR019632 Protein of unknown function DUF2497 RJP_RS01110 195f5f15b18a2c609c7f85312d919001 357 SMART SM00228 116 185 1.4E-6 T 25-04-2016 IPR001478 PDZ domain GO:0005515 RJP_RS01110 195f5f15b18a2c609c7f85312d919001 357 PANTHER PTHR22939:SF78 126 357 2.0E-53 T 25-04-2016 RJP_RS01110 195f5f15b18a2c609c7f85312d919001 357 Pfam PF13180 PDZ domain 130 183 1.1E-8 T 25-04-2016 IPR001478 PDZ domain GO:0005515 RJP_RS01110 195f5f15b18a2c609c7f85312d919001 357 Pfam PF02163 Peptidase family M50 7 343 2.8E-73 T 25-04-2016 IPR008915 Peptidase M50 GO:0004222|GO:0006508 RJP_RS01110 195f5f15b18a2c609c7f85312d919001 357 TIGRFAM TIGR00054 TIGR00054: RIP metalloprotease RseP 127 356 2.2E-47 T 25-04-2016 IPR004387 Peptidase M50, putative membrane-associated zinc metallopeptidase GO:0004222|GO:0006508|GO:0016021 RJP_RS01110 195f5f15b18a2c609c7f85312d919001 357 SUPERFAMILY SSF50156 90 195 3.94E-17 T 25-04-2016 IPR001478 PDZ domain GO:0005515 RJP_RS01110 195f5f15b18a2c609c7f85312d919001 357 Gene3D G3DSA:2.30.42.10 96 195 1.5E-18 T 25-04-2016 IPR001478 PDZ domain GO:0005515 RJP_RS01110 195f5f15b18a2c609c7f85312d919001 357 PANTHER PTHR22939 126 357 2.0E-53 T 25-04-2016 RJP_RS01455 6201d73ce28e56160d9a68c0316c70ed 96 Gene3D G3DSA:1.10.3860.10 2 91 8.3E-11 T 25-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 RJP_RS01455 6201d73ce28e56160d9a68c0316c70ed 96 Pfam PF00375 Sodium:dicarboxylate symporter family 4 87 6.5E-9 T 25-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 RJP_RS01455 6201d73ce28e56160d9a68c0316c70ed 96 SUPERFAMILY SSF118215 2 88 1.96E-12 T 25-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 RJP_RS03750 13419ac61f3e6486958bdcbdaa86369e 70 Gene3D G3DSA:3.40.630.30 12 62 6.5E-5 T 25-04-2016 IPR016181 Acyl-CoA N-acyltransferase RJP_RS03750 13419ac61f3e6486958bdcbdaa86369e 70 SUPERFAMILY SSF55729 13 62 6.82E-5 T 25-04-2016 IPR016181 Acyl-CoA N-acyltransferase RJP_RS05865 412ec9cacdc7b623a1d77907d45ee2ef 47 Gene3D G3DSA:2.30.30.110 5 47 4.6E-7 T 25-04-2016 IPR011067 Plasmid maintenance toxin/Cell growth inhibitor RJP_RS05865 412ec9cacdc7b623a1d77907d45ee2ef 47 Pfam PF02452 PemK-like, MazF-like toxin of type II toxin-antitoxin system 6 44 3.4E-5 T 25-04-2016 IPR003477 mRNA interferase PemK-like protein GO:0003677 RJP_RS05865 412ec9cacdc7b623a1d77907d45ee2ef 47 SUPERFAMILY SSF50118 5 47 1.87E-7 T 25-04-2016 IPR011067 Plasmid maintenance toxin/Cell growth inhibitor RJP_RS01705 cf595b0feb4859047a0206b2ba5da6fe 62 Gene3D G3DSA:3.30.1380.10 25 61 3.2E-6 T 25-04-2016 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain RJP_RS02875 1bcd22b748c0e3cbe5cf3a4800151f50 205 PANTHER PTHR34606 2 186 1.0E-18 T 25-04-2016 RJP_RS02875 1bcd22b748c0e3cbe5cf3a4800151f50 205 PANTHER PTHR34606:SF4 2 186 1.0E-18 T 25-04-2016 RJP_RS02875 1bcd22b748c0e3cbe5cf3a4800151f50 205 Pfam PF04972 BON domain 44 112 7.5E-18 T 25-04-2016 IPR007055 BON domain RJP_RS02875 1bcd22b748c0e3cbe5cf3a4800151f50 205 Pfam PF04972 BON domain 126 187 1.1E-8 T 25-04-2016 IPR007055 BON domain RJP_RS02100 5bd3055b7b0b4a62642cd798f59dfc89 59 Pfam PF10913 Protein of unknown function (DUF2706) 1 59 6.9E-41 T 25-04-2016 IPR024444 Protein of unknown function DUF2706 RJP_RS02100 5bd3055b7b0b4a62642cd798f59dfc89 59 ProDom PD194885 TRANSMEMBRANE MEMBRANE RP288 19 58 6.0E-16 T 25-04-2016 IPR024444 Protein of unknown function DUF2706 RJP_RS02915 f8a0ac9edf39a8567c0768da62642a57 148 Gene3D G3DSA:2.70.40.10 4 148 2.8E-56 T 25-04-2016 IPR029054 dUTPase-like RJP_RS02915 f8a0ac9edf39a8567c0768da62642a57 148 PANTHER PTHR11241 18 148 1.1E-49 T 25-04-2016 RJP_RS02915 f8a0ac9edf39a8567c0768da62642a57 148 Hamap MF_00116 Deoxyuridine 5'-triphosphate nucleotidohydrolase [dut]. 4 148 33.542 T 25-04-2016 IPR008181 Deoxyuridine triphosphate nucleotidohydrolase GO:0004170|GO:0046080 KEGG: 00240+3.6.1.23|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7206|UniPathway: UPA00610 RJP_RS02915 f8a0ac9edf39a8567c0768da62642a57 148 TIGRFAM TIGR00576 dut: dUTP diphosphatase 7 147 2.3E-55 T 25-04-2016 IPR008181 Deoxyuridine triphosphate nucleotidohydrolase GO:0004170|GO:0046080 KEGG: 00240+3.6.1.23|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7206|UniPathway: UPA00610 RJP_RS02915 f8a0ac9edf39a8567c0768da62642a57 148 SUPERFAMILY SSF51283 12 148 4.19E-52 T 25-04-2016 IPR029054 dUTPase-like RJP_RS02915 f8a0ac9edf39a8567c0768da62642a57 148 Pfam PF00692 dUTPase 17 147 8.7E-34 T 25-04-2016 IPR008180 Deoxyuridine triphosphate nucleotidohydrolase/Deoxycytidine triphosphate deaminase GO:0016787|GO:0046080 RJP_RS00275 32ac56b4d6e0a012545590a801aad69d 222 Pfam PF02674 Colicin V production protein 5 130 1.8E-15 T 25-04-2016 IPR003825 Colicin V production, CvpA GO:0009403|GO:0016020 RJP_RS01955 89d5ffc9f575c184c76d491b920cb17e 107 Pfam PF06250 Protein of unknown function (DUF1016) 2 105 7.9E-40 T 25-04-2016 IPR009362 Protein of unknown function DUF1016 RJP_RS01955 89d5ffc9f575c184c76d491b920cb17e 107 PANTHER PTHR30547 2 104 6.5E-39 T 25-04-2016 RJP_RS01955 89d5ffc9f575c184c76d491b920cb17e 107 PANTHER PTHR30547:SF0 2 104 6.5E-39 T 25-04-2016 RJP_RS03380 8cb73e5198f7956454b8ded5d5b832db 105 SUPERFAMILY SSF49354 10 101 3.17E-6 T 25-04-2016 IPR008962 PapD-like RJP_RS01270 97f59acd9bd0c2bfa2fd0ae89051118d 42 SUPERFAMILY SSF140376 2 36 5.62E-10 T 25-04-2016 RJP_RS05570 7892e7e1d774ceb617b0c1d3ad64a375 82 Pfam PF10880 Protein of unknown function (DUF2673) 1 82 6.2E-52 T 25-04-2016 IPR024247 Protein of unknown function DUF2673 RJP_RS05570 7892e7e1d774ceb617b0c1d3ad64a375 82 ProDom PD196938 PRECURSOR SIGNAL RP697 1 82 4.0E-35 T 25-04-2016 IPR024247 Protein of unknown function DUF2673 RJP_RS00775 5f173dcdf5cb2b28df772008f7695063 95 Pfam PF05101 Type IV secretory pathway, VirB3-like protein 8 89 3.5E-25 T 25-04-2016 IPR007792 Type IV secretion system, VirB3 / TrbD / AvhB RJP_RS02680 8234f8b6f0736018594866fda57939a6 279 Pfam PF02653 Branched-chain amino acid transport system / permease component 5 270 1.6E-16 T 25-04-2016 IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 RJP_RS02680 8234f8b6f0736018594866fda57939a6 279 PANTHER PTHR32196 4 272 1.0E-45 T 25-04-2016 RJP_RS02680 8234f8b6f0736018594866fda57939a6 279 PANTHER PTHR32196:SF27 4 272 1.0E-45 T 25-04-2016 RJP_RS01030 076bb522946e68b6ab8b7da985049915 236 PANTHER PTHR23291:SF42 19 235 1.9E-66 T 25-04-2016 RJP_RS01030 076bb522946e68b6ab8b7da985049915 236 Pfam PF01027 Inhibitor of apoptosis-promoting Bax1 22 231 8.2E-59 T 25-04-2016 RJP_RS01030 076bb522946e68b6ab8b7da985049915 236 PANTHER PTHR23291 19 235 1.9E-66 T 25-04-2016 IPR006214 Bax inhibitor 1-related RJP_RS05885 b14feac01ea74dcb514029bdf260ff63 107 SUPERFAMILY SSF52833 7 103 5.82E-35 T 25-04-2016 IPR012336 Thioredoxin-like fold RJP_RS05885 b14feac01ea74dcb514029bdf260ff63 107 Gene3D G3DSA:3.40.30.10 10 103 3.3E-35 T 25-04-2016 IPR012336 Thioredoxin-like fold RJP_RS05885 b14feac01ea74dcb514029bdf260ff63 107 PIRSF PIRSF005894 1 107 6.3E-48 T 25-04-2016 IPR014434 Monothiol glutaredoxin RJP_RS05885 b14feac01ea74dcb514029bdf260ff63 107 Pfam PF00462 Glutaredoxin 19 83 2.3E-19 T 25-04-2016 IPR002109 Glutaredoxin GO:0009055|GO:0015035|GO:0045454 RJP_RS05885 b14feac01ea74dcb514029bdf260ff63 107 TIGRFAM TIGR00365 TIGR00365: monothiol glutaredoxin, Grx4 family 8 103 7.0E-44 T 25-04-2016 IPR004480 Monothiol glutaredoxin-related RJP_RS05885 b14feac01ea74dcb514029bdf260ff63 107 PANTHER PTHR10293 8 103 3.4E-54 T 25-04-2016 IPR004480 Monothiol glutaredoxin-related RJP_RS00735 006701581ed590cd4e0060e06b3501a1 82 ProDom PD195745 TRANSMEMBRANE MEMBRANE RC0131 RP098 1 82 2.0E-29 T 25-04-2016 RJP_RS07090 ce9b8bb21497dfa9fb7cde34429f7589 102 PIRSF PIRSF039032 1 102 9.1E-28 T 25-04-2016 IPR009387 Toxin HigB-2 RJP_RS07090 ce9b8bb21497dfa9fb7cde34429f7589 102 Pfam PF06296 RelE toxin of RelE / RelB toxin-antitoxin system 14 98 2.5E-6 T 25-04-2016 IPR009387 Toxin HigB-2 RJP_RS05270 544bb05f24542afdc9208a11471f5901 81 SUPERFAMILY SSF143120 8 46 1.02E-8 T 25-04-2016 RJP_RS05270 544bb05f24542afdc9208a11471f5901 81 Pfam PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system 8 55 4.9E-8 T 25-04-2016 IPR006442 Type II toxin-antitoxin system, antitoxin Phd/YefM RJP_RS05270 544bb05f24542afdc9208a11471f5901 81 TIGRFAM TIGR01552 phd_fam: prevent-host-death family protein 11 60 6.1E-11 T 25-04-2016 IPR006442 Type II toxin-antitoxin system, antitoxin Phd/YefM RJP_RS05270 544bb05f24542afdc9208a11471f5901 81 Gene3D G3DSA:3.40.1620.10 7 44 4.3E-8 T 25-04-2016 IPR006442 Type II toxin-antitoxin system, antitoxin Phd/YefM RJP_RS05990 88acef19e96518c387c74aa74d1ad7d9 105 Pfam PF05164 Cell division protein ZapA 4 84 7.7E-16 T 25-04-2016 IPR007838 Cell division protein ZapA-like RJP_RS05990 88acef19e96518c387c74aa74d1ad7d9 105 SUPERFAMILY SSF102829 4 79 3.66E-16 T 25-04-2016 IPR007838 Cell division protein ZapA-like RJP_RS04650 07cf9bc5d30ca067502302fec5be10be 104 SUPERFAMILY SSF103473 1 102 1.18E-10 T 25-04-2016 IPR020846 Major facilitator superfamily domain RJP_RS04650 07cf9bc5d30ca067502302fec5be10be 104 Gene3D G3DSA:1.20.1250.20 1 94 6.3E-6 T 25-04-2016 RJP_RS02950 3a962e2e0443b6ee00fcdd59195747a8 532 PRINTS PR01165 Cytochrome c oxidase subunit I signature 172 190 8.1E-147 T 25-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 RJP_RS02950 3a962e2e0443b6ee00fcdd59195747a8 532 PRINTS PR01165 Cytochrome c oxidase subunit I signature 140 152 8.1E-147 T 25-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 RJP_RS02950 3a962e2e0443b6ee00fcdd59195747a8 532 PRINTS PR01165 Cytochrome c oxidase subunit I signature 252 273 8.1E-147 T 25-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 RJP_RS02950 3a962e2e0443b6ee00fcdd59195747a8 532 PRINTS PR01165 Cytochrome c oxidase subunit I signature 21 46 8.1E-147 T 25-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 RJP_RS02950 3a962e2e0443b6ee00fcdd59195747a8 532 PRINTS PR01165 Cytochrome c oxidase subunit I signature 322 343 8.1E-147 T 25-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 RJP_RS02950 3a962e2e0443b6ee00fcdd59195747a8 532 PRINTS PR01165 Cytochrome c oxidase subunit I signature 357 375 8.1E-147 T 25-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 RJP_RS02950 3a962e2e0443b6ee00fcdd59195747a8 532 PRINTS PR01165 Cytochrome c oxidase subunit I signature 70 93 8.1E-147 T 25-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 RJP_RS02950 3a962e2e0443b6ee00fcdd59195747a8 532 PRINTS PR01165 Cytochrome c oxidase subunit I signature 201 220 8.1E-147 T 25-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 RJP_RS02950 3a962e2e0443b6ee00fcdd59195747a8 532 PRINTS PR01165 Cytochrome c oxidase subunit I signature 385 404 8.1E-147 T 25-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 RJP_RS02950 3a962e2e0443b6ee00fcdd59195747a8 532 PRINTS PR01165 Cytochrome c oxidase subunit I signature 98 122 8.1E-147 T 25-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 RJP_RS02950 3a962e2e0443b6ee00fcdd59195747a8 532 PRINTS PR01165 Cytochrome c oxidase subunit I signature 298 313 8.1E-147 T 25-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 RJP_RS02950 3a962e2e0443b6ee00fcdd59195747a8 532 PRINTS PR01165 Cytochrome c oxidase subunit I signature 435 456 8.1E-147 T 25-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 RJP_RS02950 3a962e2e0443b6ee00fcdd59195747a8 532 Gene3D G3DSA:1.20.210.10 33 496 3.6E-225 T 25-04-2016 IPR023616 Cytochrome c oxidase, subunit I domain GO:0004129|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 RJP_RS02950 3a962e2e0443b6ee00fcdd59195747a8 532 PANTHER PTHR10422 7 531 0.0 T 25-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 RJP_RS02950 3a962e2e0443b6ee00fcdd59195747a8 532 PANTHER PTHR10422:SF18 7 531 0.0 T 25-04-2016 RJP_RS02950 3a962e2e0443b6ee00fcdd59195747a8 532 Pfam PF00115 Cytochrome C and Quinol oxidase polypeptide I 30 475 2.5E-154 T 25-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 RJP_RS02950 3a962e2e0443b6ee00fcdd59195747a8 532 SUPERFAMILY SSF81442 18 530 1.24E-213 T 25-04-2016 IPR023616 Cytochrome c oxidase, subunit I domain GO:0004129|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 RJP_RS02950 3a962e2e0443b6ee00fcdd59195747a8 532 ProSitePatterns PS00077 Heme-copper oxidase catalytic subunit, copper B binding region signature. 254 308 - T 25-04-2016 IPR023615 Cytochrome c oxidase, subunit I, copper-binding site GO:0004129|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 RJP_RS02950 3a962e2e0443b6ee00fcdd59195747a8 532 TIGRFAM TIGR02891 CtaD_CoxA: cytochrome c oxidase, subunit I 22 529 2.3E-218 T 25-04-2016 IPR014241 Cytochrome c oxidase, subunit I bacterial type GO:0004129|GO:0005507|GO:0005886|GO:0006810|GO:0022900|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 RJP_RS02395 b81306347bc572d4bd552080910e3e5a 219 Pfam PF11019 Protein of unknown function (DUF2608) 12 218 9.1E-21 T 25-04-2016 IPR022565 Protein of unknown function DUF2608 RJP_RS02395 b81306347bc572d4bd552080910e3e5a 219 ProDom PD317075 PRECURSOR RP296 SIGNAL 17 219 2.0E-14 T 25-04-2016 IPR020531 Uncharacterised protein family, RP296 RJP_RS05410 d488af003fd7effb0915815708aece84 58 Gene3D G3DSA:3.90.550.10 1 51 4.2E-5 T 25-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases RJP_RS03985 479611251bc4829a68df0c9befbee5b9 71 Pfam PF04754 Putative transposase, YhgA-like 2 69 1.9E-18 T 25-04-2016 IPR006842 Transposase (putative), YhgA-like RJP_RS01745 1f0a79e95b9e9764d6f03c17560ac4fa 107 Pfam PF11020 Domain of unknown function (DUF2610) 4 84 7.9E-36 T 25-04-2016 IPR021277 Protein of unknown function DUF2610 RJP_RS06120 f4af979ac0afe6e453c96e6c2c7c39e0 89 TIGRFAM TIGR01045 RPE1: rickettsial palindromic element RPE1 domain 34 81 3.8E-27 T 25-04-2016 IPR005728 Rickettsial palindromic element RJP_RS01680 f639402fce27e80d89b53e6c92607ccb 220 ProDom PD209044 TRANSMEMBRANE RP231 MEMBRANE 1 220 1.0E-98 T 25-04-2016 IPR022588 Protein of unknown function DUF2659 RJP_RS01680 f639402fce27e80d89b53e6c92607ccb 220 Pfam PF10858 Protein of unknown function (DUF2659) 1 220 6.9E-110 T 25-04-2016 IPR022588 Protein of unknown function DUF2659 RJP_RS05915 192000130ddac04f11a58e3d3e4f05fa 200 Pfam PF12784 PD-(D/E)XK nuclease family transposase 1 144 1.8E-25 T 25-04-2016 RJP_RS05915 192000130ddac04f11a58e3d3e4f05fa 200 TIGRFAM TIGR01784 T_den_put_tspse: conserved hypothetical protein 1 191 5.4E-22 T 25-04-2016 IPR010106 Conserved hypothetical protein CHP01784 RJP_RS00155 1e306d19d7a11300d77505462cea472c 174 Gene3D G3DSA:3.40.50.300 4 150 2.3E-9 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RJP_RS00155 1e306d19d7a11300d77505462cea472c 174 SUPERFAMILY SSF52540 3 164 3.72E-14 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RJP_RS00155 1e306d19d7a11300d77505462cea472c 174 Pfam PF13401 AAA domain 17 131 2.8E-6 T 25-04-2016 IPR003593 AAA+ ATPase domain RJP_RS00785 9d218e148d8e43fc0e332ea18186ce63 1000 Pfam PF04610 TrbL/VirB6 plasmid conjugal transfer protein 336 576 8.6E-10 T 25-04-2016 IPR007688 Plasmid conjugal transfer TrbL/VirB6 GO:0030255 RJP_RS02210 e09d370c89458669ecbd562c6a2eaba5 326 SUPERFAMILY SSF53448 98 288 2.25E-6 T 25-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases RJP_RS02110 c65a02cede4a518500e874dc1e171fff 157 Pfam PF03524 Conjugal transfer protein 46 152 8.4E-31 T 25-04-2016 IPR010258 Conjugal transfer, TrbG/VirB9/CagX RJP_RS06000 f2eb8016fc3c78777f074937cd4f716c 118 Gene3D G3DSA:1.10.260.40 5 103 6.1E-4 T 25-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 RJP_RS06000 f2eb8016fc3c78777f074937cd4f716c 118 Pfam PF13413 Helix-turn-helix domain 4 62 4.5E-20 T 25-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 RJP_RS06000 f2eb8016fc3c78777f074937cd4f716c 118 PANTHER PTHR34475:SF1 3 116 6.8E-14 T 25-04-2016 RJP_RS06000 f2eb8016fc3c78777f074937cd4f716c 118 PANTHER PTHR34475 3 116 6.8E-14 T 25-04-2016 RJP_RS02085 9cc65cf0bc4316cd61ec1dc9c597d19c 111 PANTHER PTHR34583 1 107 5.6E-28 T 25-04-2016 RJP_RS02085 9cc65cf0bc4316cd61ec1dc9c597d19c 111 Pfam PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L 5 107 1.7E-21 T 25-04-2016 IPR001133 NADH-ubiquinone oxidoreductase chain 4L/K GO:0016651|GO:0042773|GO:0055114 RJP_RS02085 9cc65cf0bc4316cd61ec1dc9c597d19c 111 PANTHER PTHR34583:SF2 1 107 5.6E-28 T 25-04-2016 RJP_RS03995 4d647b30bff45e00f51b9abf875283b9 72 Pfam PF01501 Glycosyl transferase family 8 23 70 5.3E-7 T 25-04-2016 IPR002495 Glycosyl transferase, family 8 GO:0016757 RJP_RS03995 4d647b30bff45e00f51b9abf875283b9 72 Gene3D G3DSA:3.90.550.10 7 70 5.1E-11 T 25-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases RJP_RS03995 4d647b30bff45e00f51b9abf875283b9 72 SUPERFAMILY SSF53448 9 70 4.78E-10 T 25-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases RJP_RS00600 bc96d0e233f241afb72020b3e4d35a2b 186 Pfam PF06242 Protein of unknown function (DUF1013) 39 175 1.1E-60 T 25-04-2016 IPR010421 Protein of unknown function DUF1013 RJP_RS03000 099923aa9aeb54f1e0c3d8134fb95e97 69 Gene3D G3DSA:1.10.3850.10 1 45 2.1E-5 T 25-04-2016 RJP_RS04995 d8d425675cde36002d759a4e9385b26a 73 Gene3D G3DSA:3.40.50.360 1 73 1.8E-11 T 25-04-2016 IPR029039 Flavoprotein-like domain RJP_RS04995 d8d425675cde36002d759a4e9385b26a 73 SUPERFAMILY SSF52218 1 72 2.83E-5 T 25-04-2016 IPR029039 Flavoprotein-like domain RJP_RS01710 5338bfb5a03f7acb209378c84a51aff3 53 Gene3D G3DSA:3.30.1380.10 1 52 3.1E-13 T 25-04-2016 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain RJP_RS01710 5338bfb5a03f7acb209378c84a51aff3 53 SUPERFAMILY SSF55166 1 51 2.43E-12 T 25-04-2016 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain RJP_RS01710 5338bfb5a03f7acb209378c84a51aff3 53 Pfam PF01427 D-ala-D-ala dipeptidase 1 50 9.2E-6 T 25-04-2016 IPR000755 D-alanyl-D-alanine dipeptidase GO:0005618|GO:0006508|GO:0008237|GO:0016805 MetaCyc: PWY-6454|MetaCyc: PWY-6455 RJP_RS03800 b76f28749ace777bd8a484b186a6510d 161 ProDom PD206029 RP458 4 161 3.0E-82 T 25-04-2016 IPR024386 Protein of unknown function DUF2532 RJP_RS03800 b76f28749ace777bd8a484b186a6510d 161 Pfam PF10811 Protein of unknown function (DUF2532) 4 160 2.6E-77 T 25-04-2016 IPR024386 Protein of unknown function DUF2532 RJP_RS01765 4daa8eac1c9ac1f3991e5110112d371e 77 Pfam PF12784 PD-(D/E)XK nuclease family transposase 1 75 1.3E-12 T 25-04-2016 RJP_RS01015 0a99a626450af4e4d7ebb511f0f1c878 144 ProDom PD203358 RP144 1 121 1.0E-60 T 25-04-2016 RJP_RS01015 0a99a626450af4e4d7ebb511f0f1c878 144 Pfam PF11304 Protein of unknown function (DUF3106) 12 75 5.2E-5 T 25-04-2016 IPR021455 Protein of unknown function DUF3106 RJP_RS00520 bf1bbed84a5a75f67995c53d51a132ad 105 Pfam PF10878 Protein of unknown function (DUF2672) 24 92 9.9E-43 T 25-04-2016 IPR022718 Protein of unknown function DUF2672 RJP_RS00520 bf1bbed84a5a75f67995c53d51a132ad 105 ProDom PD197221 RP061 TRANSMEMBRANE MEMBRANE RC0089 34 105 3.0E-34 T 25-04-2016 IPR022718 Protein of unknown function DUF2672 RJP_RS02620 c6937f87dedfb42cc4857ede15d804a9 411 Pfam PF04932 O-Antigen ligase 198 344 4.1E-17 T 25-04-2016 IPR007016 O-antigen ligase-related RJP_RS01810 938d3e6f78c356e82af50f46acbe6af5 158 Pfam PF01957 NfeD-like C-terminal, partner-binding 11 151 6.6E-11 T 25-04-2016 IPR002810 NfeD-like, C-terminal domain RJP_RS01810 938d3e6f78c356e82af50f46acbe6af5 158 Gene3D G3DSA:2.40.50.140 89 151 8.6E-6 T 25-04-2016 IPR012340 Nucleic acid-binding, OB-fold RJP_RS03740 8b32bcca7bc4c4e0fc27918c62df1121 68 Gene3D G3DSA:3.40.630.30 19 45 8.3E-4 T 25-04-2016 IPR016181 Acyl-CoA N-acyltransferase RJP_RS00805 c54bbb18cf18afee9c6c77fc9f2ffbc9 1153 Pfam PF04610 TrbL/VirB6 plasmid conjugal transfer protein 293 479 9.5E-23 T 25-04-2016 IPR007688 Plasmid conjugal transfer TrbL/VirB6 GO:0030255 RJP_RS00350 8a4df496971ffc71e9c19619cb35843f 163 ProDom PD542693 RC0060 PLASMID 1 161 3.0E-73 T 25-04-2016 RJP_RS04275 4905688dfdf989c8fa5f8bbf4bcecf7a 83 Pfam PF12441 CopG antitoxin of type II toxin-antitoxin system 23 77 7.9E-8 T 25-04-2016 IPR022148 CopG antitoxin RJP_RS03515 cd37425b9dad076e652da3cd1ff6e53a 1022 Pfam PF12574 120 KDa Rickettsia surface antigen 106 354 5.1E-139 T 25-04-2016 IPR020954 Rickettsia surface antigen, 120kDa RJP_RS01150 29f0965b5d712a18160f963f23f3bc69 78 Pfam PF04070 Domain of unknown function (DUF378) 14 65 1.1E-16 T 25-04-2016 IPR007211 Protein of unknown function DUF378 RJP_RS05910 f71272c0a886bebac169a3348a51d1b0 58 Pfam PF08085 Entericidin EcnA/B family 21 41 5.6E-9 T 25-04-2016 IPR012556 Entericidin A/B GO:0009636|GO:0016020 RJP_RS03485 ad8f01ca8bdb6e3dc580b976efc274d8 176 Pfam PF06835 Lipopolysaccharide-assembly, LptC-related 55 172 1.6E-8 T 25-04-2016 IPR010664 Lipopolysaccharide assembly, LptC-related RJP_RS04095 389e7a45b76b002660527ad0ed18c1b7 55 Pfam PF04754 Putative transposase, YhgA-like 1 52 1.3E-9 T 25-04-2016 IPR006842 Transposase (putative), YhgA-like RJP_RS04715 011aa1b380e6aa49bc39cf5641590180 178 Pfam PF06776 Invasion associated locus B (IalB) protein 39 176 1.6E-13 T 25-04-2016 IPR010642 Invasion protein B RJP_RS02705 f1f2b5ff53c76f6e6383c754bb16d334 27 Gene3D G3DSA:1.25.40.20 2 25 1.8E-4 T 25-04-2016 IPR020683 Ankyrin repeat-containing domain RJP_RS06190 819dd945f959781dc9f122720a0a478c 836 Pfam PF13502 AsmA-like C-terminal region 669 807 1.3E-7 T 25-04-2016 IPR032712 AsmA-like, C-terminal RJP_RS06190 819dd945f959781dc9f122720a0a478c 836 Pfam PF13116 Protein of unknown function 231 487 6.7E-9 T 25-04-2016 IPR025263 Domain of unknown function DUF3971 RJP_RS03755 4711040373272531b1f36b2c8e4013ef 71 Gene3D G3DSA:3.40.630.30 7 67 6.5E-4 T 25-04-2016 IPR016181 Acyl-CoA N-acyltransferase RJP_RS06900 ba4e8b56e2ea528a25c1fd94549dc257 171 ProDom PD207074 TRANSMEMBRANE MEMBRANE UNCHARACTERIZED RC1356 RP875 1 171 8.0E-92 T 25-04-2016 RJP_RS05075 5189046ff28a8d5424f5dd4df22a220a 76 SUPERFAMILY SSF47598 5 45 8.23E-7 T 25-04-2016 IPR010985 Ribbon-helix-helix GO:0006355 RJP_RS06970 4aeec11a54d4d699f92ca57d90a4c109 78 Pfam PF02498 BRO family, N-terminal domain 16 45 3.9E-5 T 25-04-2016 IPR003497 BRO N-terminal domain RJP_RS01000 73091de40844efb6851d498a622be22d 391 TIGRFAM TIGR01045 RPE1: rickettsial palindromic element RPE1 domain 236 283 1.2E-28 T 25-04-2016 IPR005728 Rickettsial palindromic element RJP_RS02650 4f26081df87aefac9771855efd926d11 339 ProDom PD210175 RP364 RP363 102 336 6.0E-105 T 25-04-2016 IPR020168 Uncharacterised protein family RP364 RJP_RS02570 5a4a24e6e9ab4049b5734e1c9dd4229b 94 Pfam PF12441 CopG antitoxin of type II toxin-antitoxin system 36 88 1.1E-6 T 25-04-2016 IPR022148 CopG antitoxin RJP_RS04405 f15bae0ae7d76f97257949d93d5adcfb 132 ProDom PD201674 DIVISION CELL RP568 MEMBRANE TRANSMEMBRANE FTSL 5 129 3.0E-57 T 25-04-2016 RJP_RS03095 dab600ebfb1885c7f565c59c40d337ed 167 Pfam PF12100 Domain of unknown function (DUF3576) 64 162 4.0E-36 T 25-04-2016 IPR021959 Protein of unknown function DUF3576