RMA_RS00005 IPR005177 Bifunctional kinase-pyrophosphorylase RMA_RS00005 IPR026565 Putative pyruvate, phosphate dikinase regulatory protein RMA_RS00010 IPR005746 Thioredoxin RMA_RS00010 IPR012336 Thioredoxin-like fold RMA_RS00010 IPR013766 Thioredoxin domain RMA_RS00010 IPR017937 Thioredoxin, conserved site RMA_RS00015 IPR003439 ABC transporter-like RMA_RS00015 IPR003593 AAA+ ATPase domain RMA_RS00015 IPR017871 ABC transporter, conserved site RMA_RS00015 IPR027417 P-loop containing nucleoside triphosphate hydrolase RMA_RS00020 IPR000412 ABC-2 transporter RMA_RS00020 IPR013525 ABC-2 type transporter RMA_RS00025 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II RMA_RS00025 IPR016040 NAD(P)-binding domain RMA_RS00025 IPR017938 Riboflavin synthase-like beta-barrel RMA_RS00025 IPR023753 Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain RMA_RS00035 IPR001451 Bacterial transferase hexapeptide repeat RMA_RS00035 IPR010137 Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase RMA_RS00035 IPR011004 Trimeric LpxA-like RMA_RS00035 IPR018357 Hexapeptide transferase, conserved site RMA_RS00035 IPR029098 Udp N-acetylglucosamine O-acyltransferase, C-terminal RMA_RS00040 IPR010084 Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ RMA_RS00040 IPR013114 Beta-hydroxydecanoyl thiol ester dehydrase, FabA/FabZ RMA_RS00040 IPR029069 HotDog domain RMA_RS00045 IPR001451 Bacterial transferase hexapeptide repeat RMA_RS00045 IPR007691 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase RMA_RS00045 IPR011004 Trimeric LpxA-like RMA_RS00045 IPR018357 Hexapeptide transferase, conserved site RMA_RS00045 IPR020573 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, non-repeat region RMA_RS00085 IPR003442 tRNA threonylcarbamoyl adenosine modification protein TsaE RMA_RS00085 IPR027417 P-loop containing nucleoside triphosphate hydrolase RMA_RS00090 IPR006127 Periplasmic solute binding protein family RMA_RS00095 IPR002646 Poly A polymerase, head domain RMA_RS00095 IPR032828 RMA_RS00095 RMA_RS00110 IPR005546 Autotransporter beta-domain RMA_RS00110 IPR020179 Antigen surface cell precursor, Sca1 RMA_RS00165 IPR002146 ATPase, F0 complex, subunit B/B', bacterial/chloroplast RMA_RS00170 IPR003319 ATP synthase YMF19-like, N-terminal RMA_RS00175 IPR000454 ATPase, F0 complex, subunit C RMA_RS00175 IPR002379 V-ATPase proteolipid subunit C-like domain RMA_RS00175 IPR020537 ATPase, F0 complex, subunit C, DCCD-binding site RMA_RS00180 IPR000568 ATPase, F0 complex, subunit A RMA_RS00180 IPR023011 ATPase, F0 complex, subunit A, active site RMA_RS00185 IPR032820 RMA_RS00185 RMA_RS00190 IPR012336 Thioredoxin-like fold RMA_RS00190 IPR017937 Thioredoxin, conserved site RMA_RS00195 IPR003711 CarD-like/TRCF domain RMA_RS00200 IPR018773 Methyltransferase regulatory domain, predicted RMA_RS00200 IPR025714 Methyltransferase domain RMA_RS00200 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like RMA_RS00205 IPR001238 DNA-binding, RecF RMA_RS00205 IPR003395 RecF/RecN/SMC, N-terminal RMA_RS00205 IPR018078 DNA-binding, RecF, conserved site RMA_RS00205 IPR027417 P-loop containing nucleoside triphosphate hydrolase RMA_RS00225 IPR000489 Pterin-binding RMA_RS00225 IPR011005 Dihydropteroate synthase-like RMA_RS00235 IPR006157 Dihydroneopterin aldolase/epimerase domain RMA_RS00240 IPR020171 Uncharacterised protein family RC0039 RMA_RS00265 IPR003782 Copper chaperone SCO1/SenC RMA_RS00265 IPR012336 Thioredoxin-like fold RMA_RS00270 IPR003774 Protein of unknown function UPF0301 RMA_RS00275 IPR003825 Colicin V production, CvpA RMA_RS00295 IPR005546 Autotransporter beta-domain RMA_RS00300 IPR020183 Uncharacterised protein family RC0048 RMA_RS00345 IPR001270 ClpA/B family RMA_RS00345 IPR003593 AAA+ ATPase domain RMA_RS00345 IPR003959 ATPase, AAA-type, core RMA_RS00345 IPR004176 Clp, N-terminal RMA_RS00345 IPR017730 Chaperonin ClpB RMA_RS00345 IPR018368 ClpA/B, conserved site 1 RMA_RS00345 IPR019489 Clp ATPase, C-terminal RMA_RS00345 IPR027417 P-loop containing nucleoside triphosphate hydrolase RMA_RS00345 IPR028299 ClpA/B, conserved site 2 RMA_RS00355 IPR000905 Gcp-like domain RMA_RS00355 IPR017860 Peptidase M22, conserved site RMA_RS00355 IPR017861 Kae1/YgjD family RMA_RS00355 IPR022450 tRNA N6-adenosine threonylcarbamoyltransferase, TsaD RMA_RS00360 IPR005804 Fatty acid desaturase, type 1 RMA_RS00360 IPR015876 Fatty acid desaturase, type 1, core RMA_RS00370 IPR000529 Ribosomal protein S6 RMA_RS00370 IPR014717 Translation elongation factor EF1B/ribosomal protein S6 RMA_RS00370 IPR020814 Ribosomal protein S6, plastid/chloroplast RMA_RS00375 IPR001648 Ribosomal protein S18 RMA_RS00375 IPR018275 Ribosomal protein S18, conserved site RMA_RS00380 IPR000244 Ribosomal protein L9 RMA_RS00380 IPR009027 Ribosomal protein L9/RNase H1, N-terminal RMA_RS00380 IPR020069 Ribosomal protein L9, C-terminal RMA_RS00380 IPR020070 Ribosomal protein L9, N-terminal RMA_RS00380 IPR020594 Ribosomal protein L9, bacteria/chloroplast RMA_RS00385 IPR005728 Rickettsial palindromic element RMA_RS00385 IPR011063 tRNA(Ile)-lysidine/2-thiocytidine synthase RMA_RS00385 IPR012094 Lysidine-tRNA(Ile) synthetase RMA_RS00385 IPR012795 Lysidine-tRNA(Ile) synthetase, N-terminal RMA_RS00385 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold RMA_RS00390 IPR000642 Peptidase M41 RMA_RS00390 IPR003593 AAA+ ATPase domain RMA_RS00390 IPR003959 ATPase, AAA-type, core RMA_RS00390 IPR003960 ATPase, AAA-type, conserved site RMA_RS00390 IPR005936 Peptidase, FtsH RMA_RS00390 IPR011546 Peptidase M41, FtsH extracellular RMA_RS00390 IPR027417 P-loop containing nucleoside triphosphate hydrolase RMA_RS00395 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like RMA_RS00405 IPR001041 2Fe-2S ferredoxin-type domain RMA_RS00405 IPR004489 Succinate dehydrogenase/fumarate reductase iron-sulphur protein RMA_RS00405 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site RMA_RS00405 IPR009051 Alpha-helical ferredoxin RMA_RS00405 IPR012675 Beta-grasp domain RMA_RS00405 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site RMA_RS00405 IPR025192 Succinate dehydogenase/fumarate reductase N-terminal RMA_RS00415 IPR003788 Putative S-adenosyl-L-methionine-dependent methyltransferase MidA RMA_RS00415 IPR005728 Rickettsial palindromic element RMA_RS00415 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like RMA_RS00420 IPR001640 Prolipoprotein diacylglyceryl transferase RMA_RS00425 IPR006685 Mechanosensitive ion channel MscS RMA_RS00425 IPR010920 Like-Sm (LSM) domain RMA_RS00425 IPR030192 RMA_RS00425 RMA_RS00430 IPR001708 Membrane insertase OXA1/ALB3/YidC RMA_RS00430 IPR019998 Membrane insertase YidC RMA_RS00430 IPR028053 Membrane insertase YidC, N-terminal RMA_RS00430 IPR028055 Membrane insertase YidC/Oxa1, C-terminal RMA_RS00435 IPR000462 CDP-alcohol phosphatidyltransferase RMA_RS00435 IPR004570 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase RMA_RS00440 IPR001765 Carbonic anhydrase RMA_RS00465 IPR018711 Domain of unknown function DUF2233 RMA_RS00470 IPR000181 Formylmethionine deformylase RMA_RS00470 IPR023635 Peptide deformylase RMA_RS00475 IPR004667 ADP/ATP carrier protein RMA_RS00475 IPR020846 Major facilitator superfamily domain RMA_RS00480 IPR000849 Sugar phosphate transporter RMA_RS00480 IPR011701 Major facilitator superfamily RMA_RS00480 IPR020846 Major facilitator superfamily domain RMA_RS00485 IPR001564 Nucleoside diphosphate kinase RMA_RS00485 IPR023005 Nucleoside diphosphate kinase, active site RMA_RS00490 IPR002218 Glucose-inhibited division protein A-related RMA_RS00490 IPR004416 Glucose-inhibited division protein A RMA_RS00490 IPR020595 Glucose-inhibited division protein A-related, conserved site RMA_RS00490 IPR023753 Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain RMA_RS00490 IPR026904 GidA associated domain 3 RMA_RS00495 IPR003682 rRNA small subunit methyltransferase G RMA_RS00495 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like RMA_RS00500 IPR025669 AAA domain RMA_RS00500 IPR027417 P-loop containing nucleoside triphosphate hydrolase RMA_RS00505 IPR003115 ParB/Sulfiredoxin RMA_RS00505 IPR004437 ParB/RepB/Spo0J partition protein family RMA_RS00510 IPR003439 ABC transporter-like RMA_RS00510 IPR003593 AAA+ ATPase domain RMA_RS00510 IPR017871 ABC transporter, conserved site RMA_RS00510 IPR022374 ABC transporter, ATP-binding protein, ChvD RMA_RS00510 IPR027417 P-loop containing nucleoside triphosphate hydrolase RMA_RS00510 IPR032781 RMA_RS00510 RMA_RS00515 IPR022718 Protein of unknown function DUF2672 RMA_RS00520 IPR006218 DAHP synthetase I/KDSA RMA_RS00520 IPR006269 3-deoxy-8-phosphooctulonate synthase RMA_RS00520 IPR013785 Aldolase-type TIM barrel RMA_RS00550 IPR000361 FeS cluster biogenesis RMA_RS00550 IPR016092 FeS cluster insertion protein RMA_RS00550 IPR017870 FeS cluster insertion, C-terminal, conserved site RMA_RS00555 IPR003607 HD/PDEase domain RMA_RS00555 IPR006261 Deoxyguanosinetriphosphate triphosphohydrolase RMA_RS00555 IPR006674 HD domain RMA_RS00555 IPR023023 Deoxyguanosinetriphosphate triphosphohydrolase, type 2 RMA_RS00555 IPR026875 Phosphohydrolase-associated domain RMA_RS00560 IPR001278 Arginine-tRNA ligase RMA_RS00560 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site RMA_RS00560 IPR005148 Arginyl tRNA synthetase N-terminal domain RMA_RS00560 IPR008909 DALR anticodon binding RMA_RS00560 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding RMA_RS00560 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold RMA_RS00565 IPR007730 Sporulation-related domain RMA_RS00570 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal RMA_RS00570 IPR005742 DNA topoisomerase IV, subunit A, Gram-negative RMA_RS00570 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal beta-pinwheel RMA_RS00570 IPR013758 DNA topoisomerase, type IIA, subunit A/ C-terminal, alpha-beta RMA_RS00570 IPR013760 DNA topoisomerase, type IIA-like domain RMA_RS00570 IPR024946 Arginine repressor C-terminal-like domain RMA_RS00580 IPR023614 Porin domain RMA_RS00585 IPR008180 Deoxyuridine triphosphate nucleotidohydrolase/Deoxycytidine triphosphate deaminase RMA_RS00585 IPR011962 Deoxycytidine triphosphate deaminase RMA_RS00585 IPR029054 dUTPase-like RMA_RS00590 IPR003708 Bacterial protein export chaperone SecB RMA_RS00595 IPR001789 Signal transduction response regulator, receiver domain RMA_RS00595 IPR001867 Signal transduction response regulator, C-terminal RMA_RS00595 IPR011006 CheY-like superfamily RMA_RS00595 IPR011991 Winged helix-turn-helix DNA-binding domain RMA_RS00600 IPR016428 NADPH-dependent 7-cyano-7-deazaguanine reductase, QueF type 2 RMA_RS00600 IPR029139 NADPH-dependent 7-cyano-7-deazaguanine reductase, N-terminal RMA_RS00600 IPR029500 NADPH-dependent 7-cyano-7-deazaguanine reductase QueF RMA_RS00605 IPR010421 Protein of unknown function DUF1013 RMA_RS00610 IPR012136 NADP transhydrogenase, beta subunit RMA_RS00610 IPR029035 DHS-like NAD/FAD-binding domain RMA_RS00615 IPR005618 Outer membrane protein, OmpW RMA_RS00615 IPR011250 Outer membrane protein/outer membrane enzyme PagP , beta-barrel RMA_RS00620 IPR000620 Drug/metabolite transporter RMA_RS00625 IPR005828 General substrate transporter RMA_RS00625 IPR011701 Major facilitator superfamily RMA_RS00625 IPR020846 Major facilitator superfamily domain RMA_RS00645 IPR004692 Preprotein translocase SecG subunit RMA_RS00655 IPR005546 Autotransporter beta-domain RMA_RS00660 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding RMA_RS00660 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold RMA_RS00660 IPR015273 Cysteinyl-tRNA synthetase, class Ia, DALR RMA_RS00660 IPR015803 Cysteine-tRNA ligase RMA_RS00660 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase RMA_RS00660 IPR032678 RMA_RS00660 RMA_RS00665 IPR001865 Ribosomal protein S2 RMA_RS00665 IPR005706 Ribosomal protein S2, bacteria/mitochondria/plastid RMA_RS00665 IPR018130 Ribosomal protein S2, conserved site RMA_RS00665 IPR023591 Ribosomal protein S2, flavodoxin-like domain RMA_RS00670 IPR001816 Translation elongation factor EFTs/EF1B RMA_RS00670 IPR009060 UBA-like RMA_RS00670 IPR014039 Translation elongation factor EFTs/EF1B, dimerisation RMA_RS00670 IPR018101 Translation elongation factor Ts, conserved site RMA_RS00685 IPR005728 Rickettsial palindromic element RMA_RS00685 IPR007507 3-deoxy-D-manno-octulosonic-acid transferase, N-terminal RMA_RS00690 IPR007172 Domain of unknown function DUF374 RMA_RS00695 IPR004838 Aminotransferases, class-I, pyridoxal-phosphate-binding site RMA_RS00695 IPR004839 Aminotransferase, class I/classII RMA_RS00695 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 RMA_RS00695 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 RMA_RS00695 IPR015424 Pyridoxal phosphate-dependent transferase RMA_RS00700 IPR009614 Toxin YoeB RMA_RS00705 IPR006442 Type II toxin-antitoxin system, antitoxin Phd/YefM RMA_RS00710 IPR011990 Tetratricopeptide-like helical domain RMA_RS00710 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like RMA_RS00715 IPR007428 VacJ-like lipoprotein RMA_RS00720 IPR008869 Toluene tolerance Ttg2/phospholipid-binding protein MlaC RMA_RS00720 IPR023094 Toluene tolerance protein, alpha-helical RMA_RS00720 IPR032710 RMA_RS00720 RMA_RS00725 IPR000836 Phosphoribosyltransferase domain RMA_RS00725 IPR005728 Rickettsial palindromic element RMA_RS00725 IPR005946 Ribose-phosphate diphosphokinase RMA_RS00725 IPR029057 Phosphoribosyltransferase-like RMA_RS00725 IPR029099 Ribose-phosphate pyrophosphokinase, N-terminal domain RMA_RS00730 IPR000821 Alanine racemase RMA_RS00730 IPR001608 Alanine racemase, N-terminal RMA_RS00730 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal RMA_RS00730 IPR011079 Alanine racemase, C-terminal RMA_RS00730 IPR020622 Alanine racemase, pyridoxal-phosphate attachment site RMA_RS00730 IPR029066 PLP-binding barrel RMA_RS00735 IPR003453 Permease domain RMA_RS00735 IPR030802 RMA_RS00735 RMA_RS00740 IPR003439 ABC transporter-like RMA_RS00740 IPR003593 AAA+ ATPase domain RMA_RS00740 IPR017871 ABC transporter, conserved site RMA_RS00740 IPR027417 P-loop containing nucleoside triphosphate hydrolase RMA_RS00775 IPR001383 Ribosomal protein L28 RMA_RS00775 IPR026569 Ribosomal protein L28/L24 RMA_RS00780 IPR002150 Ribosomal protein L31 RMA_RS00790 IPR006073 GTP binding domain RMA_RS00790 IPR019987 GTP-binding protein, ribosome biogenesis, YsxC RMA_RS00790 IPR027417 P-loop containing nucleoside triphosphate hydrolase RMA_RS00795 IPR001048 Aspartate/glutamate/uridylate kinase RMA_RS00795 IPR004662 Acetylglutamate kinase RMA_RS00800 IPR007792 Type IV secretion system, VirB3 / TrbD / AvhB RMA_RS00805 IPR003593 AAA+ ATPase domain RMA_RS00805 IPR004346 CagE, TrbE, VirB component of type IV transporter system RMA_RS00805 IPR018145 CagE, TrbE, VirB component of type IV transporter system, central domain RMA_RS00805 IPR027417 P-loop containing nucleoside triphosphate hydrolase RMA_RS00810 IPR007688 Conjugal transfer, TrbL/VirB6 RMA_RS00815 IPR007688 Conjugal transfer, TrbL/VirB6 RMA_RS00820 IPR007688 Conjugal transfer, TrbL/VirB6 RMA_RS00825 IPR007688 Conjugal transfer, TrbL/VirB6 RMA_RS00850 IPR002649 tRNA (guanine-N1-)-methyltransferase, bacteria RMA_RS00850 IPR016009 tRNA methyltransferase TRMD/TRM10-type domain RMA_RS00850 IPR023148 tRNA (guanine-N1-)-methyltransferase, C-terminal RMA_RS00850 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal RMA_RS00850 IPR029028 Alpha/beta knot methyltransferases RMA_RS00855 IPR001857 Ribosomal protein L19 RMA_RS00855 IPR008991 Translation protein SH3-like domain RMA_RS00855 IPR018257 Ribosomal protein L19, conserved site RMA_RS00860 IPR018753 Azospirillum phage Cd, Gp10 RMA_RS00865 IPR005665 Protein-export membrane protein SecF, bacterial RMA_RS00865 IPR022645 Protein-export membrane protein SecD/SecF, bacterial RMA_RS00865 IPR022646 Protein-export membrane protein SecD/SecF/SecDF, conserved site RMA_RS00865 IPR022813 Protein-export membrane protein SecD/SecF, archaeal and bacterial RMA_RS00870 IPR001949 NADH:ubiquinone oxidoreductase, 51kDa subunit, conserved site RMA_RS00870 IPR011537 NADH ubiquinone oxidoreductase, F subunit RMA_RS00870 IPR011538 NADH:ubiquinone oxidoreductase, 51kDa subunit RMA_RS00870 IPR019554 Soluble ligand binding domain RMA_RS00870 IPR019575 NADH ubiquinone oxidoreductase, F subunit, iron sulphur binding RMA_RS00875 IPR000223 Peptidase S26A, signal peptidase I RMA_RS00875 IPR015927 Peptidase S24/S26A/S26B/S26C RMA_RS00875 IPR019757 Peptidase S26A, signal peptidase I, lysine active site RMA_RS00875 IPR019758 Peptidase S26A, signal peptidase I, conserved site RMA_RS00875 IPR019759 Peptidase S24/S26A/S26B RMA_RS00875 IPR028360 Peptidase S24/S26, beta-ribbon domain RMA_RS00880 IPR000999 Ribonuclease III domain RMA_RS00880 IPR011907 Ribonuclease III RMA_RS00880 IPR014720 Double-stranded RNA-binding domain RMA_RS00885 IPR004044 K Homology domain, type 2 RMA_RS00885 IPR005225 Small GTP-binding protein domain RMA_RS00885 IPR005662 GTP-binding protein Era RMA_RS00885 IPR005728 Rickettsial palindromic element RMA_RS00885 IPR006073 GTP binding domain RMA_RS00885 IPR009019 K homology domain, prokaryotic type RMA_RS00885 IPR015946 K homology domain-like, alpha/beta RMA_RS00885 IPR027417 P-loop containing nucleoside triphosphate hydrolase RMA_RS00890 IPR002176 Crossover junction endodeoxyribonuclease RuvC RMA_RS00890 IPR012337 Ribonuclease H-like domain RMA_RS00890 IPR020563 Crossover junction endodeoxyribonuclease RuvC, magnesium-binding site RMA_RS00895 IPR001537 tRNA/rRNA methyltransferase, SpoU type RMA_RS00895 IPR004384 RNA methyltransferase TrmH, group 1 RMA_RS00895 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal RMA_RS00895 IPR029028 Alpha/beta knot methyltransferases RMA_RS00900 IPR010235 Nucleotidyltransferase substrate binding protein, HI0074 RMA_RS00905 IPR002934 Nucleotidyl transferase domain RMA_RS00910 IPR009367 Mitochondrial fission protein ELM1-like RMA_RS00915 IPR000808 Mrp, conserved site RMA_RS00915 IPR019591 Mrp/NBP35 ATP-binding protein RMA_RS00915 IPR027417 P-loop containing nucleoside triphosphate hydrolase RMA_RS00920 IPR001107 Band 7 protein RMA_RS00920 IPR001972 Stomatin family RMA_RS00920 IPR010201 HflK RMA_RS00925 IPR001107 Band 7 protein RMA_RS00925 IPR001972 Stomatin family RMA_RS00925 IPR010200 HflC RMA_RS00930 IPR001478 PDZ domain RMA_RS00930 IPR001940 Peptidase S1C RMA_RS00930 IPR009003 Trypsin-like cysteine/serine peptidase domain RMA_RS00930 IPR011782 Peptidase S1C, Do RMA_RS00935 IPR001763 Rhodanese-like domain RMA_RS00935 IPR020936 Uncharacterised protein family UPF0176 RMA_RS00940 IPR000701 Succinate dehydrogenase/Fumarate reductase, transmembrane subunit RMA_RS00940 IPR014314 Succinate dehydrogenase, cytochrome b556 subunit RMA_RS00940 IPR018495 Succinate dehydrogenase, cytochrome b subunit, conserved site RMA_RS00945 IPR000701 Succinate dehydrogenase/Fumarate reductase, transmembrane subunit RMA_RS00945 IPR014312 Succinate dehydrogenase, hydrophobic membrane anchor RMA_RS00950 IPR003952 Fumarate reductase/succinate dehydrogenase, FAD-binding site RMA_RS00950 IPR003953 FAD binding domain RMA_RS00950 IPR011281 Succinate dehydrogenase, flavoprotein subunit RMA_RS00950 IPR014006 Succinate dehydrogenase/fumarate reductase, flavoprotein subunit RMA_RS00950 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal RMA_RS00950 IPR023753 Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain RMA_RS00950 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain RMA_RS00950 IPR030664 RMA_RS00950 RMA_RS00955 IPR000515 MetI-like domain RMA_RS00955 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain, His/Glu/Gln/Arg/opine family RMA_RS00960 IPR005679 Ribosomal protein S12, bacteria RMA_RS00960 IPR006032 Ribosomal protein S12/S23 RMA_RS00960 IPR012340 Nucleic acid-binding, OB-fold RMA_RS00965 IPR000235 Ribosomal protein S5/S7 RMA_RS00965 IPR005717 Ribosomal protein S7, bacterial/organellar-type RMA_RS00965 IPR020606 Ribosomal protein S7, conserved site RMA_RS00965 IPR023798 Ribosomal protein S7 domain RMA_RS00970 IPR000640 Translation elongation factor EFG, V domain RMA_RS00970 IPR000795 Elongation factor, GTP-binding domain RMA_RS00970 IPR004161 Translation elongation factor EFTu/EF1A, domain 2 RMA_RS00970 IPR004540 Translation elongation factor EFG/EF2 RMA_RS00970 IPR005225 Small GTP-binding protein domain RMA_RS00970 IPR005517 Translation elongation factor EFG/EF2, domain IV RMA_RS00970 IPR009000 Translation protein, beta-barrel domain RMA_RS00970 IPR009022 Elongation factor G, III-V domain RMA_RS00970 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup RMA_RS00970 IPR020568 Ribosomal protein S5 domain 2-type fold RMA_RS00970 IPR027417 P-loop containing nucleoside triphosphate hydrolase RMA_RS00970 IPR031157 RMA_RS00970 RMA_RS00980 IPR001901 Protein translocase complex, SecE/Sec61-gamma subunit RMA_RS00980 IPR005807 SecE subunit of protein translocation complex RMA_RS00980 IPR022943 Preprotein translocase subunit SecE RMA_RS00985 IPR001062 Transcription antitermination protein, NusG RMA_RS00985 IPR005824 KOW RMA_RS00985 IPR006645 NusG, N-terminal RMA_RS00985 IPR008991 Translation protein SH3-like domain RMA_RS00985 IPR014722 Ribosomal protein L2 domain 2 RMA_RS00985 IPR015869 Transcription antitermination protein, NusG, bacteria, conserved site RMA_RS00990 IPR000911 Ribosomal protein L11/L12 RMA_RS00990 IPR006519 Ribosomal protein L11, bacterial-type RMA_RS00990 IPR020783 Ribosomal protein L11, C-terminal RMA_RS00990 IPR020784 Ribosomal protein L11, N-terminal RMA_RS00990 IPR020785 Ribosomal protein L11, conserved site RMA_RS00995 IPR002143 Ribosomal protein L1 RMA_RS00995 IPR005878 Ribosomal protein L1, bacterial-type RMA_RS00995 IPR016094 Ribosomal protein L1, 2-layer alpha/beta-sandwich RMA_RS00995 IPR016095 Ribosomal protein L1, 3-layer alpha/beta-sandwich RMA_RS00995 IPR023673 Ribosomal protein L1, conserved site RMA_RS00995 IPR023674 Ribosomal protein L1-like RMA_RS00995 IPR028364 Ribosomal protein L1/ribosomal biogenesis protein RMA_RS01000 IPR001790 Ribosomal protein L10/acidic P0 RMA_RS01000 IPR002363 Ribosomal protein L10, eubacterial, conserved site RMA_RS01000 IPR022973 Ribosomal protein L10 RMA_RS01005 IPR000206 Ribosomal protein L7/L12 RMA_RS01005 IPR008932 Ribosomal protein L7/L12, oligomerisation RMA_RS01005 IPR013823 Ribosomal protein L7/L12, C-terminal RMA_RS01005 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like RMA_RS01010 IPR007120 DNA-directed RNA polymerase, subunit 2, domain 6 RMA_RS01010 IPR007121 RNA polymerase, beta subunit, conserved site RMA_RS01010 IPR007641 RNA polymerase Rpb2, domain 7 RMA_RS01010 IPR007642 RNA polymerase Rpb2, domain 2 RMA_RS01010 IPR007644 RNA polymerase, beta subunit, protrusion RMA_RS01010 IPR007645 RNA polymerase Rpb2, domain 3 RMA_RS01010 IPR010243 DNA-directed RNA polymerase, beta subunit RMA_RS01010 IPR014724 RNA polymerase Rpb2, OB-fold RMA_RS01010 IPR015712 DNA-directed RNA polymerase, subunit 2 RMA_RS01010 IPR019462 DNA-directed RNA polymerase, beta subunit, external 1 domain RMA_RS01015 IPR000722 RNA polymerase, alpha subunit RMA_RS01015 IPR006592 RNA polymerase, N-terminal RMA_RS01015 IPR007066 RNA polymerase Rpb1, domain 3 RMA_RS01015 IPR007080 RNA polymerase Rpb1, domain 1 RMA_RS01015 IPR007081 RNA polymerase Rpb1, domain 5 RMA_RS01015 IPR007083 RNA polymerase Rpb1, domain 4 RMA_RS01015 IPR012754 DNA-directed RNA polymerase, subunit beta-prime RMA_RS01020 IPR005728 Rickettsial palindromic element RMA_RS01025 IPR000819 Peptidase M17, leucyl aminopeptidase, C-terminal RMA_RS01025 IPR008283 Peptidase M17, leucyl aminopeptidase, N-terminal RMA_RS01025 IPR011356 Leucine aminopeptidase/peptidase B RMA_RS01025 IPR023042 Peptidase M17, leucine aminopeptidase RMA_RS01035 IPR021455 Protein of unknown function DUF3106 RMA_RS01040 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb RMA_RS01040 IPR004115 GAD-like domain RMA_RS01040 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) RMA_RS01040 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type RMA_RS01040 IPR004524 Aspartate-tRNA ligase, class IIb, bacterial/mitochondrial-type RMA_RS01040 IPR012340 Nucleic acid-binding, OB-fold RMA_RS01040 IPR018150 Aminoacyl-tRNA synthetase, class II (D/K/N)-like RMA_RS01040 IPR029351 GAD domain RMA_RS01050 IPR006214 Bax inhibitor 1-related RMA_RS01055 IPR000846 Dihydrodipicolinate reductase, N-terminal RMA_RS01055 IPR016040 NAD(P)-binding domain RMA_RS01055 IPR022663 Dihydrodipicolinate reductase, C-terminal RMA_RS01055 IPR022664 Dihydrodipicolinate reductase, conserved site RMA_RS01055 IPR023940 Dihydrodipicolinate reductase, bacterial RMA_RS01060 IPR002563 Flavin reductase-like, FMN-binding RMA_RS01060 IPR012349 FMN-binding split barrel RMA_RS01065 IPR001320 Ionotropic glutamate receptor RMA_RS01065 IPR001638 Extracellular solute-binding protein, family 3 RMA_RS01070 IPR003789 Aspartyl/glutamyl-tRNA amidotransferase subunit B-related RMA_RS01070 IPR004413 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, B subunit RMA_RS01070 IPR006075 Aspartyl/Glutamyl-tRNA(Gln) amidotransferase, subunit B/E, catalytic RMA_RS01070 IPR017958 Glutamyl-tRNA(Gln) amidotransferase, subunit B, conserved site RMA_RS01070 IPR017959 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, subunit B /E RMA_RS01070 IPR018027 Asn/Gln amidotransferase RMA_RS01070 IPR023168 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B, C-terminal RMA_RS01075 IPR000120 Amidase RMA_RS01075 IPR004412 Glutamyl-tRNA(Gln) amidotransferase A subunit RMA_RS01075 IPR020556 Amidase, conserved site RMA_RS01075 IPR023631 Amidase signature domain RMA_RS01080 IPR003837 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, C subunit RMA_RS01085 IPR002661 Ribosome recycling factor RMA_RS01085 IPR023584 Ribosome recycling factor domain RMA_RS01090 IPR001048 Aspartate/glutamate/uridylate kinase RMA_RS01090 IPR011817 Uridylate kinase RMA_RS01090 IPR015963 Uridylate kinase, bacteria RMA_RS01095 IPR002758 Na+/H+ antiporter subunit E RMA_RS01100 IPR004638 Drug resistance transporter EmrB/QacA subfamily RMA_RS01100 IPR011701 Major facilitator superfamily RMA_RS01100 IPR020846 Major facilitator superfamily domain RMA_RS01105 IPR024246 Protein of unknown function DUF2674 RMA_RS01125 IPR000184 Bacterial surface antigen (D15) RMA_RS01125 IPR010827 Surface antigen variable number RMA_RS01125 IPR023707 Outer membrane protein assembly factor BamA RMA_RS01130 IPR001478 PDZ domain RMA_RS01130 IPR004387 Peptidase M50, putative membrane-associated zinc metallopeptidase RMA_RS01130 IPR008915 Peptidase M50 RMA_RS01135 IPR006027 NusB/RsmB/TIM44 RMA_RS01135 IPR011605 NusB antitermination factor RMA_RS01140 IPR002877 Ribosomal RNA methyltransferase FtsJ domain RMA_RS01140 IPR015507 Ribosomal RNA large subunit methyltransferase E RMA_RS01140 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like RMA_RS01145 IPR029058 Alpha/Beta hydrolase fold RMA_RS01155 IPR005031 Streptomyces cyclase/dehydrase RMA_RS01155 IPR023393 START-like domain RMA_RS01160 IPR005728 Rickettsial palindromic element RMA_RS01160 IPR012875 Protein of unknown function DUF1674 RMA_RS01165 IPR006700 Ribosomal RNA small subunit methyltransferase E RMA_RS01165 IPR015947 PUA-like domain RMA_RS01165 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal RMA_RS01165 IPR029028 Alpha/beta knot methyltransferases RMA_RS01170 IPR007211 Protein of unknown function DUF378 RMA_RS01175 IPR001036 Acriflavin resistance protein RMA_RS01175 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains RMA_RS01180 IPR000119 Histone-like bacterial DNA-binding protein RMA_RS01180 IPR010992 Integration host factor (IHF)-like DNA-binding domain RMA_RS01180 IPR020816 Histone-like DNA-binding protein, conserved site RMA_RS01185 IPR027417 P-loop containing nucleoside triphosphate hydrolase RMA_RS01190 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain RMA_RS01190 IPR003593 AAA+ ATPase domain RMA_RS01190 IPR004125 Signal recognition particle, SRP54 subunit, M-domain RMA_RS01190 IPR004780 Signal recognition particle protein Ffh RMA_RS01190 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle RMA_RS01190 IPR022941 Signal recognition particle, SRP54 subunit RMA_RS01190 IPR027417 P-loop containing nucleoside triphosphate hydrolase RMA_RS01200 IPR004559 Coproporphyrinogen III oxidase, oxygen-independent related RMA_RS01200 IPR006638 Elongator protein 3/MiaB/NifB RMA_RS01200 IPR007197 Radical SAM RMA_RS01200 IPR010723 HemN, C-terminal domain RMA_RS01200 IPR023404 Radical SAM, alpha/beta horseshoe RMA_RS01235 IPR001991 Sodium:dicarboxylate symporter RMA_RS01235 IPR018107 Sodium:dicarboxylate symporter, conserved site RMA_RS01240 IPR004323 Divalent ion tolerance protein, CutA RMA_RS01240 IPR011322 Nitrogen regulatory PII-like, alpha/beta RMA_RS01245 IPR007115 6-pyruvoyl tetrahydropterin synthase/QueD family protein RMA_RS01250 IPR000089 Biotin/lipoyl attachment RMA_RS01250 IPR001078 2-oxoacid dehydrogenase acyltransferase, catalytic domain RMA_RS01250 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site RMA_RS01250 IPR004167 E3 binding RMA_RS01250 IPR006255 Dihydrolipoamide succinyltransferase RMA_RS01250 IPR011053 Single hybrid motif RMA_RS01250 IPR023213 Chloramphenicol acetyltransferase-like domain RMA_RS01255 IPR001017 Dehydrogenase, E1 component RMA_RS01255 IPR005475 Transketolase-like, pyrimidine-binding domain RMA_RS01255 IPR011603 2-oxoglutarate dehydrogenase E1 component RMA_RS01255 IPR029061 Thiamin diphosphate-binding fold RMA_RS01255 IPR031717 RMA_RS01255 RMA_RS01255 IPR032106 RMA_RS01255 RMA_RS01265 IPR003395 RecF/RecN/SMC, N-terminal RMA_RS01265 IPR004604 DNA recombination/repair protein RecN RMA_RS01265 IPR027417 P-loop containing nucleoside triphosphate hydrolase RMA_RS01270 IPR011990 Tetratricopeptide-like helical domain RMA_RS01270 IPR017689 Outer membrane protein assembly factor BamD RMA_RS01280 IPR001305 Heat shock protein DnaJ, cysteine-rich domain RMA_RS01280 IPR001623 DnaJ domain RMA_RS01280 IPR002939 Chaperone DnaJ, C-terminal RMA_RS01280 IPR008971 HSP40/DnaJ peptide-binding RMA_RS01280 IPR012724 Chaperone DnaJ RMA_RS01280 IPR018253 DnaJ domain, conserved site RMA_RS01285 IPR012725 Chaperone DnaK RMA_RS01285 IPR013126 Heat shock protein 70 family RMA_RS01285 IPR018181 Heat shock protein 70, conserved site RMA_RS01285 IPR029047 Heat shock protein 70kD, peptide-binding domain RMA_RS01285 IPR029048 Heat shock protein 70kD, C-terminal domain RMA_RS01290 IPR001478 PDZ domain RMA_RS01290 IPR001940 Peptidase S1C RMA_RS01290 IPR009003 Trypsin-like cysteine/serine peptidase domain RMA_RS01315 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal RMA_RS01315 IPR027417 P-loop containing nucleoside triphosphate hydrolase RMA_RS01320 IPR009078 Ferritin-like superfamily RMA_RS01320 IPR011566 Ubiquinone biosynthesis protein Coq7 RMA_RS01320 IPR012347 Ferritin-related RMA_RS01325 IPR000298 Cytochrome c oxidase subunit III domain RMA_RS01325 IPR013833 Cytochrome c oxidase, subunit III, 4-helical bundle RMA_RS01325 IPR024791 Cytochrome c oxidase subunit III RMA_RS01330 IPR007039 Conjugal transfer TrbC/type IV secretion VirB2 RMA_RS01335 IPR011723 Zinc finger/thioredoxin putative RMA_RS01340 IPR001451 Bacterial transferase hexapeptide repeat RMA_RS01340 IPR005664 Tetrahydrodipicolinate N-succinyltransferase, transferase hexapeptide repeat family RMA_RS01340 IPR011004 Trimeric LpxA-like RMA_RS01340 IPR023180 Tetrahydrodipicolinate-N-succinyltransferase, chain A, domain 1 RMA_RS01355 IPR027417 P-loop containing nucleoside triphosphate hydrolase RMA_RS01360 IPR001264 Glycosyl transferase, family 51 RMA_RS01360 IPR001460 Penicillin-binding protein, transpeptidase RMA_RS01360 IPR009647 Penicillin-binding, C-terminal RMA_RS01360 IPR011815 Penicillin-binding protein 1C RMA_RS01360 IPR012338 Beta-lactamase/transpeptidase-like RMA_RS01360 IPR023346 Lysozyme-like domain RMA_RS01405 IPR005546 Autotransporter beta-domain RMA_RS01410 IPR006015 Universal stress protein A RMA_RS01410 IPR006016 UspA RMA_RS01410 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold RMA_RS01415 IPR011852 TRAP transporter solute receptor, TAXI family RMA_RS01425 IPR001041 2Fe-2S ferredoxin-type domain RMA_RS01425 IPR001055 Adrenodoxin RMA_RS01425 IPR012675 Beta-grasp domain RMA_RS01425 IPR018298 Adrenodoxin, iron-sulphur binding site RMA_RS01430 IPR010236 ISC system FeS cluster assembly, HscA chaperone RMA_RS01430 IPR013126 Heat shock protein 70 family RMA_RS01430 IPR018181 Heat shock protein 70, conserved site RMA_RS01430 IPR029047 Heat shock protein 70kD, peptide-binding domain RMA_RS01430 IPR029048 Heat shock protein 70kD, C-terminal domain RMA_RS01435 IPR001623 DnaJ domain RMA_RS01435 IPR004640 Co-chaperone Hsc20 RMA_RS01435 IPR009073 Co-chaperone HscB, C-terminal oligomerisation domain RMA_RS01440 IPR001352 Ribonuclease HII/HIII RMA_RS01440 IPR012337 Ribonuclease H-like domain RMA_RS01440 IPR022898 Ribonuclease HII RMA_RS01440 IPR024567 Ribonuclease HII/HIII domain RMA_RS01445 IPR001650 Helicase, C-terminal RMA_RS01445 IPR001943 UVR domain RMA_RS01445 IPR004807 UvrABC system, subunit B RMA_RS01445 IPR006935 Helicase/UvrB domain RMA_RS01445 IPR014001 Helicase, superfamily 1/2, ATP-binding domain RMA_RS01445 IPR024759 UvrB, YAD/RRR-motif-containing domain RMA_RS01445 IPR027417 P-loop containing nucleoside triphosphate hydrolase RMA_RS01450 IPR002109 Glutaredoxin RMA_RS01450 IPR011767 Glutaredoxin active site RMA_RS01450 IPR011900 Glutaredoxin, GrxC RMA_RS01450 IPR012336 Thioredoxin-like fold RMA_RS01450 IPR014025 Glutaredoxin subgroup RMA_RS01455 IPR003439 ABC transporter-like RMA_RS01455 IPR003593 AAA+ ATPase domain RMA_RS01455 IPR011527 ABC transporter type 1, transmembrane domain RMA_RS01455 IPR017871 ABC transporter, conserved site RMA_RS01455 IPR027417 P-loop containing nucleoside triphosphate hydrolase RMA_RS01460 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal RMA_RS01460 IPR005743 DNA gyrase, subunit A RMA_RS01460 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal beta-pinwheel RMA_RS01460 IPR013757 Type IIA DNA topoisomerase subunit A, alpha-helical domain RMA_RS01460 IPR013758 DNA topoisomerase, type IIA, subunit A/ C-terminal, alpha-beta RMA_RS01460 IPR013760 DNA topoisomerase, type IIA-like domain RMA_RS01460 IPR024946 Arginine repressor C-terminal-like domain RMA_RS01490 IPR007667 Hypoxia induced protein, domain RMA_RS01495 IPR007479 ISC system FeS cluster assembly, IscX RMA_RS01500 IPR000181 Formylmethionine deformylase RMA_RS01500 IPR023635 Peptide deformylase RMA_RS01505 IPR002376 Formyl transferase, N-terminal RMA_RS01505 IPR005793 Formyl transferase, C-terminal RMA_RS01505 IPR005794 Methionyl-tRNA formyltransferase RMA_RS01505 IPR011034 Formyl transferase, C-terminal-like RMA_RS01530 IPR005654 ATPase, AFG1-like RMA_RS01530 IPR027417 P-loop containing nucleoside triphosphate hydrolase RMA_RS01570 IPR003439 ABC transporter-like RMA_RS01570 IPR003593 AAA+ ATPase domain RMA_RS01570 IPR011527 ABC transporter type 1, transmembrane domain RMA_RS01570 IPR017871 ABC transporter, conserved site RMA_RS01570 IPR027417 P-loop containing nucleoside triphosphate hydrolase RMA_RS01575 IPR022715 Protein of unknown function DUF2671 RMA_RS01580 IPR002585 Cytochrome d ubiquinol oxidase, subunit I RMA_RS01585 IPR003317 Cytochrome d ubiquinol oxidase, subunit II RMA_RS01590 IPR006442 Type II toxin-antitoxin system, antitoxin Phd/YefM RMA_RS01595 IPR007712 Toxin-antitoxin system, RelE/ParE toxin family RMA_RS01595 IPR009614 Toxin YoeB RMA_RS01600 IPR001173 Glycosyltransferase 2-like RMA_RS01600 IPR029044 Nucleotide-diphospho-sugar transferases RMA_RS01605 IPR001431 Peptidase M16, zinc-binding site RMA_RS01605 IPR007863 Peptidase M16, C-terminal domain RMA_RS01605 IPR011237 Peptidase M16 domain RMA_RS01605 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like RMA_RS01605 IPR011765 Peptidase M16, N-terminal RMA_RS01610 IPR013816 ATP-grasp fold, subdomain 2 RMA_RS01610 IPR028923 SAICAR synthetase/ADE2, N-terminal RMA_RS01620 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ H/ P/ S), conserved domain RMA_RS01620 IPR002320 Threonine-tRNA ligase, class IIa RMA_RS01620 IPR004095 TGS RMA_RS01620 IPR004154 Anticodon-binding RMA_RS01620 IPR012675 Beta-grasp domain RMA_RS01620 IPR012676 TGS-like RMA_RS01620 IPR012947 Threonyl/alanyl tRNA synthetase, SAD RMA_RS01620 IPR018163 Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain RMA_RS01630 IPR011527 ABC transporter type 1, transmembrane domain RMA_RS01635 IPR025668 Transposase DDE domain RMA_RS01645 IPR003439 ABC transporter-like RMA_RS01645 IPR003593 AAA+ ATPase domain RMA_RS01645 IPR017871 ABC transporter, conserved site RMA_RS01645 IPR027417 P-loop containing nucleoside triphosphate hydrolase RMA_RS01660 IPR022589 Protein of unknown function DUF2660 RMA_RS01670 IPR003423 Outer membrane efflux protein RMA_RS01670 IPR010130 Type I secretion outer membrane protein, TolC RMA_RS01675 IPR019632 Protein of unknown function DUF2497 RMA_RS01680 IPR020683 Ankyrin repeat-containing domain RMA_RS01685 IPR000565 DNA topoisomerase, type IIA, subunit B RMA_RS01685 IPR001241 DNA topoisomerase, type IIA RMA_RS01685 IPR002288 DNA gyrase B subunit, C-terminal RMA_RS01685 IPR003594 Histidine kinase-like ATPase, C-terminal domain RMA_RS01685 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative RMA_RS01685 IPR006171 Toprim domain RMA_RS01685 IPR013506 DNA topoisomerase, type IIA, subunit B, domain 2 RMA_RS01685 IPR013759 DNA topoisomerase, type IIA, central domain RMA_RS01685 IPR013760 DNA topoisomerase, type IIA-like domain RMA_RS01685 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup RMA_RS01685 IPR018522 DNA topoisomerase, type IIA, conserved site RMA_RS01685 IPR020568 Ribosomal protein S5 domain 2-type fold RMA_RS01690 IPR001478 PDZ domain RMA_RS01690 IPR004447 C-terminal-processing peptidase S41A RMA_RS01690 IPR005151 Tail specific protease RMA_RS01690 IPR029045 ClpP/crotonase-like domain RMA_RS01695 IPR003594 Histidine kinase-like ATPase, C-terminal domain RMA_RS01695 IPR003661 Signal transduction histidine kinase EnvZ-like, dimerisation/phosphoacceptor domain RMA_RS01695 IPR004358 Signal transduction histidine kinase-related protein, C-terminal RMA_RS01700 IPR011990 Tetratricopeptide-like helical domain RMA_RS01700 IPR014162 Tol-Pal system, YbgF RMA_RS01700 IPR019734 Tetratricopeptide repeat RMA_RS01705 IPR022588 Protein of unknown function DUF2659 RMA_RS01710 IPR002372 Pyrrolo-quinoline quinone repeat RMA_RS01710 IPR011047 Quinonprotein alcohol dehydrogenase-like superfamily RMA_RS01710 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat RMA_RS01710 IPR027295 Quinonprotein alcohol dehydrogenase-like domain RMA_RS01715 IPR005822 Ribosomal protein L13 RMA_RS01715 IPR005823 Ribosomal protein L13, bacterial-type RMA_RS01715 IPR023563 Ribosomal protein L13, conserved site RMA_RS01715 IPR023564 Ribosomal protein L13 domain RMA_RS01720 IPR000754 Ribosomal protein S9 RMA_RS01720 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup RMA_RS01720 IPR020568 Ribosomal protein S5 domain 2-type fold RMA_RS01720 IPR020574 Ribosomal protein S9, conserved site RMA_RS01720 IPR023035 Ribosomal protein S9, bacterial/plastid RMA_RS01730 IPR002686 Transposase IS200-like RMA_RS01740 IPR001533 Transcriptional coactivator/pterin dehydratase RMA_RS01755 IPR000086 NUDIX hydrolase domain RMA_RS01755 IPR015797 NUDIX hydrolase domain-like RMA_RS01755 IPR020084 NUDIX hydrolase, conserved site RMA_RS01755 IPR022927 RNA pyrophosphohydrolase RppH RMA_RS01760 IPR000160 GGDEF domain RMA_RS01760 IPR001789 Signal transduction response regulator, receiver domain RMA_RS01760 IPR011006 CheY-like superfamily RMA_RS01760 IPR029787 Nucleotide cyclase RMA_RS01765 IPR001059 Translation elongation factor P/YeiP, central RMA_RS01765 IPR008991 Translation protein SH3-like domain RMA_RS01765 IPR011768 Translation elongation factor P RMA_RS01765 IPR012340 Nucleic acid-binding, OB-fold RMA_RS01765 IPR013185 Translation elongation factor, KOW-like RMA_RS01765 IPR013852 Translation elongation factor P/YeiP, conserved site RMA_RS01765 IPR014722 Ribosomal protein L2 domain 2 RMA_RS01765 IPR015365 Elongation factor P, C-terminal RMA_RS01765 IPR020599 Translation elongation factor P/YeiP RMA_RS01770 IPR000760 Inositol monophosphatase RMA_RS01775 IPR021277 Protein of unknown function DUF2610 RMA_RS01780 IPR003817 Phosphatidylserine decarboxylase-related RMA_RS01780 IPR033175 RMA_RS01780 RMA_RS01785 IPR000462 CDP-alcohol phosphatidyltransferase RMA_RS01785 IPR012616 CDP-alcohol phosphatidyltransferase, C-terminal RMA_RS01790 IPR006143 RND efflux pump, membrane fusion protein RMA_RS01790 IPR032317 RMA_RS01790 RMA_RS01810 IPR002634 BolA protein RMA_RS01815 IPR001633 EAL domain RMA_RS01820 IPR000713 Mur ligase, N-terminal RMA_RS01820 IPR004101 Mur ligase, C-terminal RMA_RS01820 IPR005758 UDP-N-acetylmuramate-alanine ligase RMA_RS01820 IPR013221 Mur ligase, central RMA_RS01820 IPR016040 NAD(P)-binding domain RMA_RS01825 IPR003170 UDP-N-acetylenolpyruvoylglucosamine reductase RMA_RS01825 IPR006094 FAD linked oxidase, N-terminal RMA_RS01825 IPR011601 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal RMA_RS01825 IPR016166 FAD-binding, type 2 RMA_RS01825 IPR016167 FAD-binding, type 2, subdomain 1 RMA_RS01825 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 RMA_RS01830 IPR000291 D-alanine--D-alanine ligase/VANA/B/C, conserved site RMA_RS01830 IPR005905 D-alanine--D-alanine ligase RMA_RS01830 IPR011095 D-alanine--D-alanine ligase, C-terminal RMA_RS01830 IPR011127 D-alanine--D-alanine ligase, N-terminal domain RMA_RS01830 IPR013815 ATP-grasp fold, subdomain 1 RMA_RS01830 IPR013816 ATP-grasp fold, subdomain 2 RMA_RS01830 IPR016185 Pre-ATP-grasp domain RMA_RS01835 IPR005548 Cell division protein FtsQ/DivIB RMA_RS01835 IPR013685 Polypeptide-transport-associated, FtsQ-type RMA_RS01835 IPR026579 Cell division protein FtsQ RMA_RS01840 IPR003494 SHS2 domain inserted in FtsA RMA_RS01840 IPR020823 Cell division protein FtsA RMA_RS01845 IPR002810 NfeD-like, C-terminal domain RMA_RS01845 IPR012340 Nucleic acid-binding, OB-fold RMA_RS01850 IPR002327 Cytochrome c, class IA/ IB RMA_RS01850 IPR009056 Cytochrome c-like domain RMA_RS01860 IPR004463 UDP-3-O-acyl N-acetylglucosamine deacetylase RMA_RS01860 IPR011334 UDP-3-O-acyl N-acetylglucosamine deacetylase, C-terminal RMA_RS01860 IPR015870 UDP-3-O-acyl N-acetylglucosamine deacetylase, N-terminal RMA_RS01860 IPR020568 Ribosomal protein S5 domain 2-type fold RMA_RS01865 IPR020846 Major facilitator superfamily domain RMA_RS01870 IPR003029 Ribosomal protein S1, RNA-binding domain RMA_RS01870 IPR004659 Ribonuclease E/G RMA_RS01870 IPR012340 Nucleic acid-binding, OB-fold RMA_RS01870 IPR019307 RNA-binding protein AU-1/Ribonuclease E/G RMA_RS01870 IPR022967 RNA-binding domain, S1 RMA_RS01875 IPR003780 COX15/CtaA family RMA_RS01875 IPR023754 Heme A synthase, type 2 RMA_RS01880 IPR002942 RNA-binding S4 domain RMA_RS01880 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F RMA_RS01880 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site RMA_RS01880 IPR020103 Pseudouridine synthase, catalytic domain RMA_RS01885 IPR001466 Beta-lactamase-related RMA_RS01885 IPR012338 Beta-lactamase/transpeptidase-like RMA_RS01890 IPR004808 AP endonuclease 1 RMA_RS01890 IPR005135 Endonuclease/exonuclease/phosphatase RMA_RS01890 IPR020847 AP endonuclease 1, binding site RMA_RS01895 IPR001017 Dehydrogenase, E1 component RMA_RS01895 IPR017597 Pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit, subgroup y RMA_RS01895 IPR029061 Thiamin diphosphate-binding fold RMA_RS01900 IPR005475 Transketolase-like, pyrimidine-binding domain RMA_RS01900 IPR009014 Transketolase, C-terminal/Pyruvate-ferredoxin oxidoreductase, domain II RMA_RS01900 IPR029061 Thiamin diphosphate-binding fold RMA_RS01900 IPR033247 RMA_RS01900 RMA_RS01900 IPR033248 RMA_RS01900 RMA_RS01905 IPR000640 Translation elongation factor EFG, V domain RMA_RS01905 IPR000795 Elongation factor, GTP-binding domain RMA_RS01905 IPR004161 Translation elongation factor EFTu/EF1A, domain 2 RMA_RS01905 IPR005225 Small GTP-binding protein domain RMA_RS01905 IPR006298 GTP-binding protein TypA RMA_RS01905 IPR009000 Translation protein, beta-barrel domain RMA_RS01905 IPR009022 Elongation factor G, III-V domain RMA_RS01905 IPR027417 P-loop containing nucleoside triphosphate hydrolase RMA_RS01905 IPR031157 RMA_RS01905 RMA_RS01920 IPR005632 Chaperone protein Skp RMA_RS01920 IPR024930 Skp domain RMA_RS01925 IPR001804 Isocitrate and isopropylmalate dehydrogenases family RMA_RS01925 IPR014273 Isocitrate dehydrogenase, alphaproteobacteria-type RMA_RS01925 IPR019818 Isocitrate/isopropylmalate dehydrogenase, conserved site RMA_RS01925 IPR024084 Isopropylmalate dehydrogenase-like domain RMA_RS01930 IPR005133 Na+/H+ antiporter subunit G RMA_RS01935 IPR007182 Na+/H+ antiporter MnhB subunit-related protein RMA_RS01935 IPR025383 Domain of unknown function DUF4040 RMA_RS01940 IPR003544 Cytochrome c-type biogenesis protein CcmB RMA_RS01945 IPR022714 Protein of unknown function DUF2670 RMA_RS01950 IPR005805 Rieske iron-sulphur protein, C-terminal RMA_RS01950 IPR006317 Ubiquinol-cytochrome c reductase, iron-sulphur subunit RMA_RS01950 IPR014349 Rieske iron-sulphur protein RMA_RS01950 IPR017941 Rieske [2Fe-2S] iron-sulphur domain RMA_RS01950 IPR019470 Ubiquitinol-cytochrome C reductase, Fe-S subunit, TAT signal RMA_RS01950 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal RMA_RS01955 IPR005798 Cytochrome b/b6, C-terminal RMA_RS01955 IPR016174 Di-haem cytochrome, transmembrane RMA_RS01955 IPR027387 Cytochrome b/b6-like domain RMA_RS01955 IPR030689 RMA_RS01955 RMA_RS01960 IPR000305 GIY-YIG nuclease superfamily RMA_RS01965 IPR002326 Cytochrome c1 RMA_RS01965 IPR009056 Cytochrome c-like domain RMA_RS01965 IPR021157 Cytochrome c1, transmembrane anchor, C-terminal RMA_RS01975 IPR002068 Alpha crystallin/Hsp20 domain RMA_RS01975 IPR008978 HSP20-like chaperone RMA_RS01975 IPR031107 RMA_RS01975 RMA_RS01985 IPR009362 Protein of unknown function DUF1016 RMA_RS01990 IPR009362 Protein of unknown function DUF1016 RMA_RS01995 IPR000352 Peptide chain release factor class I/class II RMA_RS01995 IPR004374 Peptide chain release factor 2 RMA_RS01995 IPR005139 Peptide chain release factor RMA_RS01995 IPR014720 Double-stranded RNA-binding domain RMA_RS02000 IPR000640 Translation elongation factor EFG, V domain RMA_RS02000 IPR000795 Elongation factor, GTP-binding domain RMA_RS02000 IPR004161 Translation elongation factor EFTu/EF1A, domain 2 RMA_RS02000 IPR005225 Small GTP-binding protein domain RMA_RS02000 IPR006297 Elongation factor 4 RMA_RS02000 IPR009022 Elongation factor G, III-V domain RMA_RS02000 IPR013842 GTP-binding protein LepA, C-terminal RMA_RS02000 IPR027417 P-loop containing nucleoside triphosphate hydrolase RMA_RS02000 IPR031157 RMA_RS02000 RMA_RS02015 IPR005546 Autotransporter beta-domain RMA_RS02015 IPR006315 Outer membrane autotransporter barrel RMA_RS02055 IPR011989 Armadillo-like helical RMA_RS02060 IPR011989 Armadillo-like helical RMA_RS02060 IPR016024 Armadillo-type fold RMA_RS02080 IPR020846 Major facilitator superfamily domain RMA_RS02085 IPR001182 Cell cycle protein FtsW/RodA RMA_RS02085 IPR011923 Rod shape-determining protein RodA RMA_RS02090 IPR001375 Peptidase S9, prolyl oligopeptidase, catalytic domain RMA_RS02090 IPR002470 Peptidase S9A, prolyl oligopeptidase RMA_RS02090 IPR022437 Rickettsia palindromic element RPE3 RMA_RS02090 IPR023302 Peptidase S9A, N-terminal domain RMA_RS02090 IPR029058 Alpha/Beta hydrolase fold RMA_RS02095 IPR001750 NADH:ubiquinone/plastoquinone oxidoreductase RMA_RS02100 IPR029060 PIN domain-like RMA_RS02110 IPR001750 NADH:ubiquinone/plastoquinone oxidoreductase RMA_RS02115 IPR001750 NADH:ubiquinone/plastoquinone oxidoreductase RMA_RS02120 IPR001133 NADH-ubiquinone oxidoreductase chain 4L/K RMA_RS02125 IPR010258 Conjugal transfer, TrbG/VirB9/CagX RMA_RS02125 IPR014148 P-type conjugative transfer protein VirB9 RMA_RS02130 IPR007430 Bacterial virulence protein VirB8 RMA_RS02130 IPR032710 RMA_RS02130 RMA_RS02135 IPR024444 Protein of unknown function DUF2706 RMA_RS02140 IPR007430 Bacterial virulence protein VirB8 RMA_RS02140 IPR026264 Type IV secretion system protein VirB8/PtlE RMA_RS02140 IPR032710 RMA_RS02140 RMA_RS02145 IPR010258 Conjugal transfer, TrbG/VirB9/CagX RMA_RS02150 IPR005498 Type IV secretion system, VirB10 / TraB / TrbI RMA_RS02155 IPR001482 Type II secretion system protein E RMA_RS02155 IPR014155 Type IV secretion system protein VirB11 RMA_RS02155 IPR027417 P-loop containing nucleoside triphosphate hydrolase RMA_RS02160 IPR003688 Ti-type conjugative transfer system, TraG-like RMA_RS02160 IPR027417 P-loop containing nucleoside triphosphate hydrolase RMA_RS02165 IPR003695 Ppx/GppA phosphatase RMA_RS02200 IPR020531 Uncharacterised protein family, RP296 RMA_RS02200 IPR022565 Protein of unknown function DUF2608 RMA_RS02205 IPR020531 Uncharacterised protein family, RP296 RMA_RS02205 IPR022565 Protein of unknown function DUF2608 RMA_RS02210 IPR000760 Inositol monophosphatase RMA_RS02210 IPR020550 Inositol monophosphatase, conserved site RMA_RS02210 IPR020583 Inositol monophosphatase, metal-binding site RMA_RS02215 IPR000432 DNA mismatch repair protein MutS, C-terminal RMA_RS02215 IPR005748 DNA mismatch repair protein MutS, type 1 RMA_RS02215 IPR007695 DNA mismatch repair protein MutS-like, N-terminal RMA_RS02215 IPR007696 DNA mismatch repair protein MutS, core RMA_RS02215 IPR007860 DNA mismatch repair protein MutS, connector domain RMA_RS02215 IPR007861 DNA mismatch repair protein MutS, clamp RMA_RS02215 IPR016151 DNA mismatch repair protein MutS, N-terminal RMA_RS02215 IPR027417 P-loop containing nucleoside triphosphate hydrolase RMA_RS02220 IPR003500 Sugar-phosphate isomerase, RpiB/LacA/LacB family RMA_RS02220 IPR004785 Ribose 5-phosphate isomerase B RMA_RS02225 IPR011055 Duplicated hybrid motif RMA_RS02225 IPR016047 Peptidase M23 RMA_RS02235 IPR003669 Thymidylate synthase ThyX RMA_RS02240 IPR007195 TolB, N-terminal RMA_RS02240 IPR011659 WD40-like Beta Propeller RMA_RS02240 IPR014167 Tol-Pal system beta propeller repeat-containing protein, TolB RMA_RS02240 IPR015943 WD40/YVTN repeat-like-containing domain RMA_RS02245 IPR000943 RNA polymerase sigma-70 RMA_RS02245 IPR007627 RNA polymerase sigma-70 region 2 RMA_RS02245 IPR007630 RNA polymerase sigma-70 region 4 RMA_RS02245 IPR009042 RNA polymerase sigma-70 region 1.2 RMA_RS02245 IPR011991 Winged helix-turn-helix DNA-binding domain RMA_RS02245 IPR012759 RNA polymerase sigma factor RpoH, proteobacteria RMA_RS02245 IPR013324 RNA polymerase sigma factor, region 3/4 RMA_RS02245 IPR013325 RNA polymerase sigma factor, region 2 RMA_RS02245 IPR014284 RNA polymerase sigma-70 like domain RMA_RS02245 IPR016263 RNA polymerase sporulation-specific sigma factor, SigK/SigE RMA_RS02250 IPR007533 Cytochrome c oxidase assembly protein CtaG/Cox11 RMA_RS02250 IPR023471 Cytochrome c oxidase assembly protein CtaG/Cox11, domain RMA_RS02260 IPR004506 tRNA-specific 2-thiouridylase RMA_RS02260 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold RMA_RS02260 IPR023382 Adenine nucleotide alpha hydrolase-like domains RMA_RS02265 IPR002293 Amino acid/polyamine transporter I RMA_RS02270 IPR004154 Anticodon-binding RMA_RS02270 IPR004516 Histidine-tRNA ligase/ATP phosphoribosyltransferase regulatory subunit RMA_RS02270 IPR015807 Histidine-tRNA ligase RMA_RS02275 IPR003439 ABC transporter-like RMA_RS02275 IPR027417 P-loop containing nucleoside triphosphate hydrolase RMA_RS02310 IPR002898 MotA/TolQ/ExbB proton channel RMA_RS02310 IPR014163 Tol-Pal system, TolQ RMA_RS02315 IPR003400 Biopolymer transport protein ExbD/TolR RMA_RS02315 IPR014168 Biopolymer transport, TolR RMA_RS02325 IPR003607 HD/PDEase domain RMA_RS02330 IPR011701 Major facilitator superfamily RMA_RS02330 IPR020846 Major facilitator superfamily domain RMA_RS02335 IPR003997 RTX secretion protein D, Gram-negative bacteria RMA_RS02335 IPR006144 Secretion protein HlyD, conserved site RMA_RS02335 IPR010129 Type I secretion membrane fusion protein, HlyD RMA_RS02335 IPR011053 Single hybrid motif RMA_RS02340 IPR003439 ABC transporter-like RMA_RS02340 IPR003593 AAA+ ATPase domain RMA_RS02340 IPR010128 ATPase, type I secretion system, PrtD RMA_RS02340 IPR011527 ABC transporter type 1, transmembrane domain RMA_RS02340 IPR017871 ABC transporter, conserved site RMA_RS02340 IPR027417 P-loop containing nucleoside triphosphate hydrolase RMA_RS02345 IPR000534 Semialdehyde dehydrogenase, NAD-binding RMA_RS02345 IPR005986 Aspartate-semialdehyde dehydrogenase, beta-type RMA_RS02345 IPR012080 Aspartate-semialdehyde dehydrogenase RMA_RS02345 IPR012280 Semialdehyde dehydrogenase, dimerisation domain RMA_RS02345 IPR016040 NAD(P)-binding domain RMA_RS02350 IPR001310 Histidine triad (HIT) protein RMA_RS02350 IPR011146 HIT-like domain RMA_RS02350 IPR019808 Histidine triad, conserved site RMA_RS02360 IPR001353 Proteasome, subunit alpha/beta RMA_RS02360 IPR022281 ATP-dependent protease, HslV subunit RMA_RS02360 IPR029055 Nucleophile aminohydrolases, N-terminal RMA_RS02365 IPR003593 AAA+ ATPase domain RMA_RS02365 IPR003959 ATPase, AAA-type, core RMA_RS02365 IPR004491 Heat shock protein HslU RMA_RS02365 IPR011704 ATPase, dynein-related, AAA domain RMA_RS02365 IPR019489 Clp ATPase, C-terminal RMA_RS02365 IPR027417 P-loop containing nucleoside triphosphate hydrolase RMA_RS02375 IPR004482 Mg chelatase-related protein RMA_RS02375 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup RMA_RS02375 IPR020568 Ribosomal protein S5 domain 2-type fold RMA_RS02395 IPR002686 Transposase IS200-like RMA_RS02410 IPR003835 Glycosyl transferase, family 19 RMA_RS02410 IPR022437 Rickettsia palindromic element RPE3 RMA_RS02420 IPR003770 Uncharacterised protein family UPF0755, YceG-like RMA_RS02420 IPR013087 Zinc finger C2H2-type/integrase DNA-binding domain RMA_RS02425 IPR002908 Frataxin/CyaY RMA_RS02425 IPR020895 Frataxin conserved site RMA_RS02430 IPR020531 Uncharacterised protein family, RP296 RMA_RS02430 IPR022565 Protein of unknown function DUF2608 RMA_RS02440 IPR007963 Peptidase M61, catalytic domain RMA_RS02445 IPR002686 Transposase IS200-like RMA_RS02455 IPR001478 PDZ domain RMA_RS02465 IPR000924 Glutamyl/glutaminyl-tRNA synthetase RMA_RS02465 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site RMA_RS02465 IPR004527 Glutamate-tRNA ligase, bacterial/mitochondrial RMA_RS02465 IPR008925 Aminoacyl-tRNA synthetase, class I, anticodon-binding RMA_RS02465 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold RMA_RS02465 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain RMA_RS02465 IPR020061 Glutamyl/glutaminyl-tRNA synthetase, class Ib, alpha-bundle domain RMA_RS02465 IPR020751 Aminoacyl-tRNA synthetase, class I, anticodon-binding domain, subdomain 2 RMA_RS02470 IPR000380 DNA topoisomerase, type IA RMA_RS02470 IPR003601 DNA topoisomerase, type IA, domain 2 RMA_RS02470 IPR003602 DNA topoisomerase, type IA, DNA-binding domain RMA_RS02470 IPR005733 DNA topoisomerase I, bacterial-type RMA_RS02470 IPR006171 Toprim domain RMA_RS02470 IPR013497 DNA topoisomerase, type IA, central RMA_RS02470 IPR013498 DNA topoisomerase, type IA, zn finger RMA_RS02470 IPR013824 DNA topoisomerase, type IA, central region, subdomain 1 RMA_RS02470 IPR013825 DNA topoisomerase, type IA, central region, subdomain 2 RMA_RS02470 IPR023405 DNA topoisomerase, type IA, core domain RMA_RS02470 IPR023406 DNA topoisomerase, type IA, active site RMA_RS02470 IPR025589 Topoisomerase C-terminal repeat RMA_RS02470 IPR028612 DNA topoisomerase I, type IA RMA_RS02485 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant RMA_RS02485 IPR012336 Thioredoxin-like fold RMA_RS02485 IPR019479 Peroxiredoxin, C-terminal RMA_RS02485 IPR024706 Peroxiredoxin, AhpC-type RMA_RS02490 IPR001107 Band 7 protein RMA_RS02490 IPR001972 Stomatin family RMA_RS02490 IPR032435 RMA_RS02490 RMA_RS02500 IPR000917 Sulfatase RMA_RS02500 IPR012549 Domain of unknown function DUF1705 RMA_RS02500 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha RMA_RS02500 IPR017850 Alkaline-phosphatase-like, core domain RMA_RS02505 IPR005227 Resolvase, holliday junction-type, YqgF-like RMA_RS02505 IPR006641 YqgF/RNase H-like domain RMA_RS02505 IPR012337 Ribonuclease H-like domain RMA_RS02510 IPR001387 Cro/C1-type helix-turn-helix domain RMA_RS02510 IPR010982 Lambda repressor-like, DNA-binding domain RMA_RS02510 IPR013430 Toxin-antitoxin system, antidote protein, HigA RMA_RS02515 IPR005913 dTDP-4-dehydrorhamnose reductase RMA_RS02515 IPR016040 NAD(P)-binding domain RMA_RS02515 IPR029903 RMA_RS02515 RMA_RS02520 IPR003869 Polysaccharide biosynthesis protein, CapD-like domain RMA_RS02520 IPR013692 UDP-glucose 4-epimerase CapD, C-terminal domain RMA_RS02520 IPR016040 NAD(P)-binding domain RMA_RS02525 IPR003331 UDP-N-acetylglucosamine 2-epimerase RMA_RS02525 IPR029767 UDP-N-acetylglucosamine 2-epimerase, WecB-type RMA_RS02535 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like RMA_RS02540 IPR001173 Glycosyltransferase 2-like RMA_RS02540 IPR029044 Nucleotide-diphospho-sugar transferases RMA_RS02545 IPR006143 RND efflux pump, membrane fusion protein RMA_RS02550 IPR022565 Protein of unknown function DUF2608 RMA_RS02550 IPR023214 HAD-like domain RMA_RS02555 IPR000073 Alpha/beta hydrolase fold-1 RMA_RS02555 IPR029058 Alpha/Beta hydrolase fold RMA_RS02560 IPR001296 Glycosyl transferase, family 1 RMA_RS02560 IPR028098 Glycosyltransferase subfamily 4, N-terminal domain RMA_RS02580 IPR001912 Ribosomal protein S4/S9, N-terminal RMA_RS02580 IPR002942 RNA-binding S4 domain RMA_RS02580 IPR005709 Ribosomal protein S4, bacterial-type RMA_RS02580 IPR018079 Ribosomal protein S4, conserved site RMA_RS02580 IPR022801 Ribosomal protein S4/S9 RMA_RS02585 IPR000537 UbiA prenyltransferase family RMA_RS02585 IPR006369 Protohaem IX farnesyltransferase RMA_RS02585 IPR030470 RMA_RS02585 RMA_RS02610 IPR007844 AsmA RMA_RS02615 IPR002676 RimM protein RMA_RS02615 IPR009000 Translation protein, beta-barrel domain RMA_RS02615 IPR011033 PRC-barrel-like RMA_RS02615 IPR011961 16S rRNA processing protein RimM RMA_RS02615 IPR027275 PRC-barrel domain RMA_RS02620 IPR032712 RMA_RS02620 RMA_RS02625 IPR003761 Exonuclease VII, small subunit RMA_RS02635 IPR022148 Protein of unknown function DUF3680 RMA_RS02645 IPR003180 Methylpurine-DNA glycosylase (MPG) RMA_RS02645 IPR011034 Formyl transferase, C-terminal-like RMA_RS02650 IPR002696 Putative membrane protein insertion efficiency factor RMA_RS02655 IPR002023 NADH-quinone oxidoreductase subunit E-like RMA_RS02655 IPR012336 Thioredoxin-like fold RMA_RS02665 IPR001135 NADH-quinone oxidoreductase, subunit D RMA_RS02665 IPR014029 NADH:ubiquinone oxidoreductase, 49kDa subunit, conserved site RMA_RS02665 IPR022885 NAD(P)H-quinone oxidoreductase subunit D/H RMA_RS02665 IPR029014 NiFe hydrogenase-like RMA_RS02670 IPR001268 NADH:ubiquinone oxidoreductase, 30kDa subunit RMA_RS02670 IPR010218 NADH dehydrogenase, subunit C RMA_RS02670 IPR022436 Rickettsia palindromic element RPE2 RMA_RS02675 IPR006137 NADH:ubiquinone oxidoreductase-like, 20kDa subunit RMA_RS02675 IPR006138 NADH-ubiquinone oxidoreductase, 20 Kd subunit RMA_RS02680 IPR000440 NADH:ubiquinone/plastoquinone oxidoreductase, chain 3 RMA_RS02680 IPR023043 NAD(P)H-quinone oxidoreductase subunit 3, bacterial/plastid RMA_RS02685 IPR007016 O-antigen ligase-related RMA_RS02690 IPR019225 Protein of unknown function DUF2155 RMA_RS02705 IPR002104 Integrase, catalytic RMA_RS02705 IPR004107 Integrase, SAM-like, N-terminal RMA_RS02705 IPR011010 DNA breaking-rejoining enzyme, catalytic core RMA_RS02705 IPR011932 Tyrosine recombinase XerD RMA_RS02705 IPR013762 Integrase-like, catalytic core RMA_RS02705 IPR023009 Tyrosine recombinase XerC/XerD RMA_RS02705 IPR023109 Integrase/recombinase, N-terminal RMA_RS02710 IPR020168 Uncharacterised protein family RP364 RMA_RS02715 IPR020168 Uncharacterised protein family RP364 RMA_RS02720 IPR022439 Rickettsia palindromic element RPE4 RMA_RS02725 IPR002347 Glucose/ribitol dehydrogenase RMA_RS02725 IPR014358 Enoyl-[acyl-carrier-protein] reductase (NADH) RMA_RS02725 IPR016040 NAD(P)-binding domain RMA_RS02730 IPR003010 Carbon-nitrogen hydrolase RMA_RS02730 IPR004563 Apolipoprotein N-acyltransferase RMA_RS02740 IPR002477 Peptidoglycan binding-like RMA_RS02740 IPR002502 N-acetylmuramoyl-L-alanine amidase domain RMA_RS02765 IPR020683 Ankyrin repeat-containing domain RMA_RS02770 IPR020683 Ankyrin repeat-containing domain RMA_RS02775 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site RMA_RS02775 IPR002904 Lysine-tRNA ligase RMA_RS02775 IPR008925 Aminoacyl-tRNA synthetase, class I, anticodon-binding RMA_RS02775 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding RMA_RS02775 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold RMA_RS02775 IPR020751 Aminoacyl-tRNA synthetase, class I, anticodon-binding domain, subdomain 2 RMA_RS02780 IPR004776 Auxin efflux carrier RMA_RS02785 IPR002505 Phosphate acetyl/butaryl transferase RMA_RS02785 IPR012188 Malic enzyme, phosphate acetyl/butaryl transferase RMA_RS02785 IPR012301 Malic enzyme, N-terminal domain RMA_RS02785 IPR012302 Malic enzyme, NAD-binding RMA_RS02785 IPR015884 Malic enzyme, conserved site RMA_RS02785 IPR016040 NAD(P)-binding domain RMA_RS02800 IPR002716 PIN domain RMA_RS02800 IPR029060 PIN domain-like RMA_RS02805 IPR007159 AbrB-like domain RMA_RS02810 IPR011701 Major facilitator superfamily RMA_RS02810 IPR020846 Major facilitator superfamily domain RMA_RS02845 IPR001236 Lactate/malate dehydrogenase, N-terminal RMA_RS02845 IPR001557 L-lactate/malate dehydrogenase RMA_RS02845 IPR011275 Malate dehydrogenase, type 3 RMA_RS02845 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal RMA_RS02845 IPR016040 NAD(P)-binding domain RMA_RS02845 IPR022383 Lactate/malate dehydrogenase, C-terminal RMA_RS02850 IPR002686 Transposase IS200-like RMA_RS02855 IPR001584 Integrase, catalytic core RMA_RS02855 IPR009057 Homeodomain-like RMA_RS02855 IPR012337 Ribonuclease H-like domain RMA_RS02870 IPR004667 ADP/ATP carrier protein RMA_RS02875 IPR004468 CTP synthase RMA_RS02875 IPR017456 CTP synthase, N-terminal RMA_RS02875 IPR017926 Glutamine amidotransferase RMA_RS02875 IPR027417 P-loop containing nucleoside triphosphate hydrolase RMA_RS02875 IPR029062 Class I glutamine amidotransferase-like RMA_RS02880 IPR003329 Acylneuraminate cytidylyltransferase RMA_RS02880 IPR004528 3-deoxy-D-manno-octulosonate cytidylyltransferase RMA_RS02880 IPR029044 Nucleotide-diphospho-sugar transferases RMA_RS02900 IPR000086 NUDIX hydrolase domain RMA_RS02900 IPR015797 NUDIX hydrolase domain-like RMA_RS02900 IPR020084 NUDIX hydrolase, conserved site RMA_RS02905 IPR000883 Cytochrome c oxidase subunit I RMA_RS02905 IPR023616 Cytochrome c oxidase, subunit I domain RMA_RS02910 IPR001474 GTP cyclohydrolase I RMA_RS02910 IPR018234 GTP cyclohydrolase I, conserved site RMA_RS02910 IPR020602 GTP cyclohydrolase I domain RMA_RS02915 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ H/ P/ S), conserved domain RMA_RS02915 IPR002316 Proline-tRNA ligase, class IIa RMA_RS02915 IPR004154 Anticodon-binding RMA_RS02915 IPR004500 Prolyl-tRNA synthetase, class IIa, bacterial-type RMA_RS02915 IPR023716 Proline-tRNA ligase, class IIa, type 2 RMA_RS02920 IPR003812 Fido domain RMA_RS02930 IPR000085 Bacterial DNA recombination protein RuvA RMA_RS02930 IPR010994 RuvA domain 2-like RMA_RS02930 IPR011114 DNA helicase, Holliday junction RuvA type, domain III, C-terminal RMA_RS02930 IPR012340 Nucleic acid-binding, OB-fold RMA_RS02930 IPR013849 DNA helicase, Holliday junction RuvA type, domain I, bacterial RMA_RS02940 IPR018027 Asn/Gln amidotransferase RMA_RS02950 IPR003593 AAA+ ATPase domain RMA_RS02950 IPR004605 DNA helicase, Holliday junction RuvB type RMA_RS02950 IPR008823 DNA helicase, Holliday junction RuvB type, C-terminal RMA_RS02950 IPR008824 DNA helicase, Holliday junction RuvB type, N-terminal RMA_RS02950 IPR011991 Winged helix-turn-helix DNA-binding domain RMA_RS02950 IPR027417 P-loop containing nucleoside triphosphate hydrolase RMA_RS02955 IPR003439 ABC transporter-like RMA_RS02955 IPR003593 AAA+ ATPase domain RMA_RS02955 IPR011527 ABC transporter type 1, transmembrane domain RMA_RS02955 IPR017871 ABC transporter, conserved site RMA_RS02955 IPR027417 P-loop containing nucleoside triphosphate hydrolase RMA_RS02960 IPR011701 Major facilitator superfamily RMA_RS02960 IPR020846 Major facilitator superfamily domain RMA_RS02965 IPR001967 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A, N-terminal RMA_RS02965 IPR012338 Beta-lactamase/transpeptidase-like RMA_RS02965 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A RMA_RS02970 IPR005728 Rickettsial palindromic element RMA_RS02970 IPR009009 RlpA-like double-psi beta-barrel domain RMA_RS02970 IPR012997 Rare lipoprotein A, bacterial RMA_RS02970 IPR022438 Rickettsia palindromic element RPE5 RMA_RS02975 IPR007055 BON domain RMA_RS02980 IPR006008 Intracellular septation protein A RMA_RS02985 IPR004923 Iron permease FTR1/Fip1/EfeU RMA_RS02990 IPR008972 Cupredoxin RMA_RS02990 IPR028096 EfeO-type cupredoxin-like domain RMA_RS02995 IPR001179 Peptidyl-prolyl cis-trans isomerase, FKBP-type, domain RMA_RS03000 IPR000627 Intradiol ring-cleavage dioxygenase, C-terminal RMA_RS03000 IPR015889 Intradiol ring-cleavage dioxygenase, core RMA_RS03005 IPR012336 Thioredoxin-like fold RMA_RS03005 IPR013740 Redoxin RMA_RS03010 IPR002142 Peptidase S49 RMA_RS03010 IPR029045 ClpP/crotonase-like domain RMA_RS03015 IPR008180 Deoxyuridine triphosphate nucleotidohydrolase/Deoxycytidine triphosphate deaminase RMA_RS03015 IPR008181 Deoxyuridine triphosphate nucleotidohydrolase RMA_RS03015 IPR029054 dUTPase-like RMA_RS03020 IPR008258 Lytic transglycosylase-like SLT domain RMA_RS03020 IPR008939 Lytic transglycosylase, superhelical U-shaped RMA_RS03020 IPR016026 Lytic transglycosylase, superhelical U-shaped and linker domain RMA_RS03020 IPR023346 Lysozyme-like domain RMA_RS03030 IPR003507 Muramoyl-tetrapeptide carboxypeptidase RMA_RS03030 IPR027461 LD-carboxypeptidase A, C-terminal domain RMA_RS03030 IPR027478 Murein tetrapeptide carboxypeptidase, N-terminal domain RMA_RS03030 IPR029062 Class I glutamine amidotransferase-like RMA_RS03035 IPR011335 Restriction endonuclease type II-like RMA_RS03035 IPR022439 Rickettsia palindromic element RPE4 RMA_RS03035 IPR027417 P-loop containing nucleoside triphosphate hydrolase RMA_RS03045 IPR011697 Peptidase C26 RMA_RS03045 IPR029062 Class I glutamine amidotransferase-like RMA_RS03050 IPR000883 Cytochrome c oxidase subunit I RMA_RS03050 IPR014241 Cytochrome c oxidase, subunit I bacterial type RMA_RS03050 IPR023615 Cytochrome c oxidase, subunit I, copper-binding site RMA_RS03050 IPR023616 Cytochrome c oxidase, subunit I domain RMA_RS03060 IPR001505 Copper centre Cu(A) RMA_RS03060 IPR002429 Cytochrome c oxidase subunit II C-terminal RMA_RS03060 IPR005728 Rickettsial palindromic element RMA_RS03060 IPR008972 Cupredoxin RMA_RS03060 IPR011759 Cytochrome C oxidase subunit II, transmembrane domain RMA_RS03060 IPR014222 Cytochrome c oxidase, subunit II RMA_RS03065 IPR004821 Cytidyltransferase-like domain RMA_RS03065 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold RMA_RS03070 IPR011055 Duplicated hybrid motif RMA_RS03070 IPR016047 Peptidase M23 RMA_RS03075 IPR001872 Peptidase A8, signal peptidase II RMA_RS03080 IPR021395 Protein of unknown function DUF3035 RMA_RS03085 IPR004101 Mur ligase, C-terminal RMA_RS03085 IPR005762 UDP-N-acetylmuramoylalanine-D-glutamate ligase RMA_RS03085 IPR013221 Mur ligase, central RMA_RS03085 IPR016040 NAD(P)-binding domain RMA_RS03085 IPR018109 Folylpolyglutamate synthetase, conserved site RMA_RS03085 IPR022437 Rickettsia palindromic element RPE3 RMA_RS03090 IPR001182 Cell cycle protein FtsW/RodA RMA_RS03090 IPR013437 Cell division protein FtsW RMA_RS03095 IPR004276 Glycosyl transferase, family 28 RMA_RS03095 IPR006009 N-acetylglucosaminyltransferase, MurG RMA_RS03095 IPR007235 Glycosyl transferase, family 28, C-terminal RMA_RS03095 IPR022439 Rickettsia palindromic element RPE4 RMA_RS03115 IPR001036 Acriflavin resistance protein RMA_RS03120 IPR001036 Acriflavin resistance protein RMA_RS03125 IPR025668 Transposase DDE domain RMA_RS03135 IPR001036 Acriflavin resistance protein RMA_RS03155 IPR001296 Glycosyl transferase, family 1 RMA_RS03155 IPR028098 Glycosyltransferase subfamily 4, N-terminal domain RMA_RS03160 IPR010106 Conserved hypothetical protein CHP01784 RMA_RS03165 IPR001653 Diaminopimelate epimerase, DapF RMA_RS03165 IPR018510 Diaminopimelate epimerase, active site RMA_RS03170 IPR005839 Methylthiotransferase RMA_RS03170 IPR006467 MiaB-like tRNA modifying enzyme RMA_RS03170 IPR006638 Elongator protein 3/MiaB/NifB RMA_RS03170 IPR007197 Radical SAM RMA_RS03170 IPR013848 Methylthiotransferase, N-terminal RMA_RS03170 IPR020612 Methylthiotransferase, conserved site RMA_RS03170 IPR023404 Radical SAM, alpha/beta horseshoe RMA_RS03170 IPR023970 Methylthiotransferase/radical SAM-type protein RMA_RS03175 IPR002319 Phenylalanyl-tRNA synthetase RMA_RS03175 IPR004188 Phenylalanine-tRNA ligase, class II, N-terminal RMA_RS03175 IPR004529 Phenylalanyl-tRNA synthetase, class IIc, alpha subunit RMA_RS03175 IPR010978 tRNA-binding arm RMA_RS03175 IPR022911 Phenylalanine-tRNA ligase alpha chain 1, bacterial RMA_RS03180 IPR002547 tRNA-binding domain RMA_RS03180 IPR004532 Phenylalanine-tRNA ligase, class IIc, beta subunit RMA_RS03180 IPR005121 Phenylalanine-tRNA ligase, beta subunit, ferrodoxin-fold anticodon-binding RMA_RS03180 IPR005146 B3/B4 tRNA-binding domain RMA_RS03180 IPR005147 tRNA synthetase, B5-domain RMA_RS03180 IPR009061 DNA binding domain, putative RMA_RS03180 IPR012340 Nucleic acid-binding, OB-fold RMA_RS03180 IPR020825 Phenylalanyl-tRNA synthetase, B3/B4 RMA_RS03185 IPR001001 DNA polymerase III, beta chain RMA_RS03185 IPR022634 DNA polymerase III, beta chain, N-terminal RMA_RS03185 IPR022635 DNA polymerase III, beta chain, C-terminal RMA_RS03185 IPR022637 DNA polymerase III, beta chain, central RMA_RS03190 IPR023387 DUF1653-like domain RMA_RS03195 IPR021959 Protein of unknown function DUF3576 RMA_RS03200 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site RMA_RS03200 IPR002300 Aminoacyl-tRNA synthetase, class Ia RMA_RS03200 IPR002302 Leucine-tRNA ligase RMA_RS03200 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain RMA_RS03200 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding RMA_RS03200 IPR013155 Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding RMA_RS03200 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold RMA_RS03200 IPR025709 Leucyl-tRNA synthetase, editing domain RMA_RS03205 IPR002562 3'-5' exonuclease domain RMA_RS03205 IPR012337 Ribonuclease H-like domain RMA_RS03210 IPR007060 Septum formation initiator FtsL/DivIC RMA_RS03215 IPR000374 Phosphatidate cytidylyltransferase RMA_RS03220 IPR001441 Decaprenyl diphosphate synthase-like RMA_RS03220 IPR018520 Di-trans-poly-cis-decaprenylcistransferase-like, conserved site RMA_RS03225 IPR003594 Histidine kinase-like ATPase, C-terminal domain RMA_RS03225 IPR003661 Signal transduction histidine kinase EnvZ-like, dimerisation/phosphoacceptor domain RMA_RS03225 IPR004358 Signal transduction histidine kinase-related protein, C-terminal RMA_RS03225 IPR022437 Rickettsia palindromic element RPE3 RMA_RS03230 IPR001789 Signal transduction response regulator, receiver domain RMA_RS03230 IPR001867 Signal transduction response regulator, C-terminal RMA_RS03230 IPR011006 CheY-like superfamily RMA_RS03230 IPR011991 Winged helix-turn-helix DNA-binding domain RMA_RS03230 IPR016032 Signal transduction response regulator, C-terminal effector RMA_RS03235 IPR001544 Aminotransferase, class IV RMA_RS03235 IPR005785 Branched-chain amino acid aminotransferase I RMA_RS03235 IPR018300 Aminotransferase, class IV, conserved site RMA_RS03240 IPR002220 DapA-like RMA_RS03240 IPR005263 4-hydroxy-tetrahydrodipicolinate synthase, DapA RMA_RS03240 IPR013785 Aldolase-type TIM barrel RMA_RS03240 IPR020624 Dihydrodipicolinate synthetase, conserved site RMA_RS03240 IPR020625 Dihydrodipicolinate synthetase, active site RMA_RS03245 IPR000037 SsrA-binding protein RMA_RS03245 IPR020081 SsrA-binding protein, conserved site RMA_RS03245 IPR023620 Small protein B RMA_RS03250 IPR001853 DSBA-like thioredoxin domain RMA_RS03250 IPR012336 Thioredoxin-like fold RMA_RS03255 IPR003781 CoA-binding RMA_RS03255 IPR005810 Succinyl-CoA ligase, alpha subunit RMA_RS03255 IPR005811 ATP-citrate lyase/succinyl-CoA ligase RMA_RS03255 IPR016040 NAD(P)-binding domain RMA_RS03255 IPR016102 Succinyl-CoA synthetase-like RMA_RS03255 IPR017440 ATP-citrate lyase/succinyl-CoA ligase, active site RMA_RS03260 IPR005809 Succinyl-CoA synthetase, beta subunit RMA_RS03260 IPR005811 ATP-citrate lyase/succinyl-CoA ligase RMA_RS03260 IPR013650 ATP-grasp fold, succinyl-CoA synthetase-type RMA_RS03260 IPR013815 ATP-grasp fold, subdomain 1 RMA_RS03260 IPR013816 ATP-grasp fold, subdomain 2 RMA_RS03260 IPR016102 Succinyl-CoA synthetase-like RMA_RS03260 IPR017866 Succinyl-CoA synthetase, beta subunit, conserved site RMA_RS03270 IPR007159 AbrB-like domain RMA_RS03285 IPR001375 Peptidase S9, prolyl oligopeptidase, catalytic domain RMA_RS03285 IPR002470 Peptidase S9A, prolyl oligopeptidase RMA_RS03285 IPR015943 WD40/YVTN repeat-like-containing domain RMA_RS03285 IPR029058 Alpha/Beta hydrolase fold RMA_RS03290 IPR007379 Tim44-like domain RMA_RS03290 IPR032710 RMA_RS03290 RMA_RS03300 IPR000238 Ribosome-binding factor A RMA_RS03300 IPR015946 K homology domain-like, alpha/beta RMA_RS03300 IPR020053 Ribosome-binding factor A, conserved site RMA_RS03300 IPR023799 Ribosome-binding factor A domain RMA_RS03305 IPR020143 Uncharacterised protein family, RP436 RMA_RS03310 IPR010432 RDD RMA_RS03315 IPR000093 DNA recombination protein RecR RMA_RS03315 IPR006171 Toprim domain RMA_RS03315 IPR015967 Recombination protein RecR, conserved site RMA_RS03315 IPR023627 Recombination protein RecR RMA_RS03315 IPR023628 Recombination protein RecR, C4-type zinc finger RMA_RS03330 IPR002504 Inorganic polyphosphate/ATP-NAD kinase RMA_RS03330 IPR016064 ATP-NAD kinase-like domain RMA_RS03330 IPR017437 ATP-NAD kinase, PpnK-type, all-beta RMA_RS03330 IPR017438 Inorganic polyphosphate/ATP-NAD kinase, domain 1 RMA_RS03335 IPR001279 Beta-lactamase-like RMA_RS03335 IPR004613 Ribonuclease J RMA_RS03335 IPR011108 RNA-metabolising metallo-beta-lactamase RMA_RS03340 IPR006109 Glycerol-3-phosphate dehydrogenase, NAD-dependent, C-terminal RMA_RS03340 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent RMA_RS03340 IPR008927 6-phosphogluconate dehydrogenase, C-terminal-like RMA_RS03340 IPR011128 Glycerol-3-phosphate dehydrogenase, NAD-dependent, N-terminal RMA_RS03340 IPR013328 Dehydrogenase, multihelical RMA_RS03340 IPR016040 NAD(P)-binding domain RMA_RS03355 IPR000073 Alpha/beta hydrolase fold-1 RMA_RS03355 IPR029058 Alpha/Beta hydrolase fold RMA_RS03360 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II RMA_RS03360 IPR005982 Thioredoxin reductase RMA_RS03360 IPR008255 Pyridine nucleotide-disulphide oxidoreductase, class-II, active site RMA_RS03360 IPR023753 Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain RMA_RS03370 IPR015590 Aldehyde dehydrogenase domain RMA_RS03370 IPR016161 Aldehyde/histidinol dehydrogenase RMA_RS03370 IPR016162 Aldehyde dehydrogenase, N-terminal RMA_RS03370 IPR016163 Aldehyde dehydrogenase, C-terminal RMA_RS03370 IPR029510 Aldehyde dehydrogenase, glutamic acid active site RMA_RS03380 IPR001173 Glycosyltransferase 2-like RMA_RS03380 IPR029044 Nucleotide-diphospho-sugar transferases RMA_RS03385 IPR000212 DNA helicase, UvrD/REP type RMA_RS03385 IPR005751 ATP-dependent DNA helicase PcrA RMA_RS03385 IPR013986 DExx box DNA helicase domain RMA_RS03385 IPR014016 UvrD-like Helicase, ATP-binding domain RMA_RS03385 IPR014017 DNA helicase, UvrD-like, C-terminal RMA_RS03385 IPR027417 P-loop containing nucleoside triphosphate hydrolase RMA_RS03400 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme RMA_RS03405 IPR003111 Peptidase S16, lon N-terminal RMA_RS03405 IPR003593 AAA+ ATPase domain RMA_RS03405 IPR003959 ATPase, AAA-type, core RMA_RS03405 IPR004815 Lon protease, bacterial/eukaryotic-type RMA_RS03405 IPR008268 Peptidase S16, active site RMA_RS03405 IPR008269 Peptidase S16, Lon C-terminal RMA_RS03405 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup RMA_RS03405 IPR015947 PUA-like domain RMA_RS03405 IPR020568 Ribosomal protein S5 domain 2-type fold RMA_RS03405 IPR027065 Lon protease RMA_RS03405 IPR027417 P-loop containing nucleoside triphosphate hydrolase RMA_RS03405 IPR027543 Lon protease, bacterial RMA_RS03425 IPR003489 Ribosomal protein S30Ae/sigma 54 modulation protein RMA_RS03425 IPR032528 RMA_RS03425 RMA_RS03430 IPR001451 Bacterial transferase hexapeptide repeat RMA_RS03430 IPR011004 Trimeric LpxA-like RMA_RS03435 IPR011004 Trimeric LpxA-like RMA_RS03440 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase RMA_RS03440 IPR016040 NAD(P)-binding domain RMA_RS03440 IPR020630 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain RMA_RS03440 IPR020631 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain RMA_RS03440 IPR020867 Tetrahydrofolate dehydrogenase/cyclohydrolase, conserved site RMA_RS03445 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II RMA_RS03445 IPR022890 Ferredoxin--NADP reductase, type 2 RMA_RS03445 IPR023753 Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain RMA_RS03485 IPR025668 Transposase DDE domain RMA_RS03490 IPR000788 Ribonucleotide reductase large subunit, C-terminal RMA_RS03490 IPR008926 Ribonucleotide reductase R1 subunit, N-terminal RMA_RS03490 IPR013509 Ribonucleotide reductase large subunit, N-terminal RMA_RS03500 IPR000358 Ribonucleotide reductase small subunit RMA_RS03500 IPR009078 Ferritin-like superfamily RMA_RS03500 IPR012348 Ribonucleotide reductase-related RMA_RS03505 IPR001646 Pentapeptide repeat RMA_RS03525 IPR018022 tRNA delta(2)-isopentenylpyrophosphate transferase RMA_RS03525 IPR027417 P-loop containing nucleoside triphosphate hydrolase RMA_RS03535 IPR005841 Alpha-D-phosphohexomutase superfamily RMA_RS03535 IPR005843 Alpha-D-phosphohexomutase, C-terminal RMA_RS03535 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I RMA_RS03535 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II RMA_RS03535 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III RMA_RS03535 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III RMA_RS03535 IPR016066 Alpha-D-phosphohexomutase, conserved site RMA_RS03540 IPR003439 ABC transporter-like RMA_RS03540 IPR003593 AAA+ ATPase domain RMA_RS03540 IPR017871 ABC transporter, conserved site RMA_RS03540 IPR027417 P-loop containing nucleoside triphosphate hydrolase RMA_RS03540 IPR030921 RMA_RS03540 RMA_RS03545 IPR005653 Organic solvent tolerance-like, N-terminal RMA_RS03545 IPR005728 Rickettsial palindromic element RMA_RS03550 IPR010664 Lipopolysaccharide assembly, LptC-related RMA_RS03555 IPR000644 CBS domain RMA_RS03555 IPR001347 Sugar isomerase (SIS) RMA_RS03555 IPR004800 Phosphosugar isomerase, KdsD/KpsF-type RMA_RS03560 IPR001247 Exoribonuclease, phosphorolytic domain 1 RMA_RS03560 IPR003029 Ribosomal protein S1, RNA-binding domain RMA_RS03560 IPR004087 K Homology domain RMA_RS03560 IPR004088 K Homology domain, type 1 RMA_RS03560 IPR012162 Polyribonucleotide nucleotidyltransferase RMA_RS03560 IPR012340 Nucleic acid-binding, OB-fold RMA_RS03560 IPR015847 Exoribonuclease, phosphorolytic domain 2 RMA_RS03560 IPR015848 Polyribonucleotide nucleotidyltransferase, RNA-binding domain RMA_RS03560 IPR020568 Ribosomal protein S5 domain 2-type fold RMA_RS03560 IPR022967 RNA-binding domain, S1 RMA_RS03560 IPR027408 PNPase/RNase PH domain RMA_RS03565 IPR000589 Ribosomal protein S15 RMA_RS03565 IPR005290 Ribosomal protein S15, bacterial-type RMA_RS03565 IPR009068 S15/NS1, RNA-binding RMA_RS03570 IPR002501 Pseudouridine synthase II RMA_RS03570 IPR005728 Rickettsial palindromic element RMA_RS03570 IPR014780 tRNA pseudouridine synthase II, TruB RMA_RS03570 IPR020103 Pseudouridine synthase, catalytic domain RMA_RS03570 IPR032819 RMA_RS03570 RMA_RS03575 IPR004667 ADP/ATP carrier protein RMA_RS03585 IPR020954 Rickettsia surface antigen, 120kDa RMA_RS03590 IPR001387 Cro/C1-type helix-turn-helix domain RMA_RS03590 IPR010982 Lambda repressor-like, DNA-binding domain RMA_RS03595 IPR017039 Virulence factor BrkB RMA_RS03600 IPR008146 Glutamine synthetase, catalytic domain RMA_RS03600 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain RMA_RS03605 IPR003730 Multi-copper polyphenol oxidoreductase, laccase RMA_RS03605 IPR011324 Cytotoxic necrotizing factor-like, catalytic RMA_RS03610 IPR000181 Formylmethionine deformylase RMA_RS03610 IPR023635 Peptide deformylase RMA_RS03625 IPR001303 Class II aldolase/adducin N-terminal RMA_RS03635 IPR000121 PEP-utilising enzyme, C-terminal RMA_RS03635 IPR002192 Pyruvate phosphate dikinase, PEP/pyruvate-binding RMA_RS03635 IPR008279 PEP-utilising enzyme, mobile domain RMA_RS03635 IPR010121 Pyruvate, phosphate dikinase RMA_RS03635 IPR013815 ATP-grasp fold, subdomain 1 RMA_RS03635 IPR013816 ATP-grasp fold, subdomain 2 RMA_RS03635 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain RMA_RS03635 IPR018274 PEP-utilising enzyme, active site RMA_RS03635 IPR023151 PEP-utilising enzyme, conserved site RMA_RS03640 IPR004045 Glutathione S-transferase, N-terminal RMA_RS03640 IPR004046 Glutathione S-transferase, C-terminal RMA_RS03640 IPR010987 Glutathione S-transferase, C-terminal-like RMA_RS03640 IPR012336 Thioredoxin-like fold RMA_RS03645 IPR004408 Biotin--acetyl-CoA-carboxylase ligase RMA_RS03645 IPR015834 Uncharacterised conserved protein UCP016642, glutamine amidotransferase-like RMA_RS03645 IPR019197 Biotin-protein ligase, N-terminal RMA_RS03645 IPR029062 Class I glutamine amidotransferase-like RMA_RS03650 IPR003784 BioY protein RMA_RS03655 IPR001645 Folylpolyglutamate synthetase RMA_RS03655 IPR004101 Mur ligase, C-terminal RMA_RS03655 IPR013221 Mur ligase, central RMA_RS03655 IPR018109 Folylpolyglutamate synthetase, conserved site RMA_RS03660 IPR001189 Manganese/iron superoxide dismutase RMA_RS03660 IPR019831 Manganese/iron superoxide dismutase, N-terminal RMA_RS03660 IPR019832 Manganese/iron superoxide dismutase, C-terminal RMA_RS03660 IPR019833 Manganese/iron superoxide dismutase, binding site RMA_RS03665 IPR002641 Patatin/Phospholipase A2-related RMA_RS03665 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase RMA_RS03670 IPR003142 Biotin protein ligase, C-terminal RMA_RS03670 IPR004143 Biotin/lipoate A/B protein ligase RMA_RS03670 IPR004408 Biotin--acetyl-CoA-carboxylase ligase RMA_RS03695 IPR020174 Uncharacterised protein family RP277 RMA_RS03725 IPR010235 Nucleotidyltransferase substrate binding protein, HI0074 RMA_RS03730 IPR019284 Xylella phage Xfas53, Orf42 RMA_RS03735 IPR001288 Translation initiation factor 3 RMA_RS03735 IPR019813 Translation initiation factor 3, conserved site RMA_RS03735 IPR019814 Translation initiation factor 3, N-terminal RMA_RS03735 IPR019815 Translation initiation factor 3, C-terminal RMA_RS03740 IPR000089 Biotin/lipoyl attachment RMA_RS03740 IPR001078 2-oxoacid dehydrogenase acyltransferase, catalytic domain RMA_RS03740 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site RMA_RS03740 IPR004167 E3 binding RMA_RS03740 IPR006257 Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex RMA_RS03740 IPR011053 Single hybrid motif RMA_RS03740 IPR023213 Chloramphenicol acetyltransferase-like domain RMA_RS03745 IPR000352 Peptide chain release factor class I/class II RMA_RS03745 IPR004373 Peptide chain release factor 1 RMA_RS03745 IPR005139 Peptide chain release factor RMA_RS03745 IPR014720 Double-stranded RNA-binding domain RMA_RS03750 IPR001667 DDH domain RMA_RS03750 IPR003156 DHHA1 domain RMA_RS03750 IPR004610 Bacterial RecJ exonuclease RMA_RS03755 IPR025714 Methyltransferase domain RMA_RS03755 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like RMA_RS03760 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain RMA_RS03760 IPR003593 AAA+ ATPase domain RMA_RS03760 IPR004665 Transcription termination factor Rho RMA_RS03760 IPR011112 Rho termination factor, N-terminal RMA_RS03760 IPR011113 Rho termination factor, RNA-binding RMA_RS03760 IPR011129 Cold shock protein RMA_RS03760 IPR012340 Nucleic acid-binding, OB-fold RMA_RS03760 IPR027417 P-loop containing nucleoside triphosphate hydrolase RMA_RS03765 IPR002142 Peptidase S49 RMA_RS03765 IPR004635 Peptidase S49, SppA RMA_RS03765 IPR029045 ClpP/crotonase-like domain RMA_RS03770 IPR000119 Histone-like bacterial DNA-binding protein RMA_RS03770 IPR010992 Integration host factor (IHF)-like DNA-binding domain RMA_RS03815 IPR002104 Integrase, catalytic RMA_RS03815 IPR011010 DNA breaking-rejoining enzyme, catalytic core RMA_RS03815 IPR013762 Integrase-like, catalytic core RMA_RS03815 IPR023109 Integrase/recombinase, N-terminal RMA_RS03815 IPR025166 Domain of unknown function DUF4102 RMA_RS03820 IPR025272 Domain of unknown function DUF4065 RMA_RS03825 IPR009614 Toxin YoeB RMA_RS03840 IPR007973 Pilus assembly TraE RMA_RS03855 IPR005498 Type IV secretion system, VirB10 / TraB / TrbI RMA_RS03865 IPR025955 Type-IV secretion system protein TraC/Conjugative transfer ATPase RMA_RS03865 IPR027417 P-loop containing nucleoside triphosphate hydrolase RMA_RS03870 IPR011579 ATPase domain, prokaryote RMA_RS03870 IPR027417 P-loop containing nucleoside triphosphate hydrolase RMA_RS03880 IPR006442 Type II toxin-antitoxin system, antitoxin Phd/YefM RMA_RS03885 IPR009649 TraU RMA_RS03890 IPR012336 Thioredoxin-like fold RMA_RS03890 IPR014113 Type-F conjugative transfer system pilin assembly protein TrbC, subgroup RMA_RS03890 IPR019106 Type-F conjugative transfer system pilin assembly protein TrbC RMA_RS03895 IPR014121 Type-F conjugative transfer system mating-pair stabilisation protein TraN RMA_RS03900 IPR012336 Thioredoxin-like fold RMA_RS03905 IPR010927 Type IV conjugative transfer system protein TraH RMA_RS03910 IPR012931 TraG-like, N-terminal RMA_RS03915 IPR001440 Tetratricopeptide TPR1 RMA_RS03915 IPR011990 Tetratricopeptide-like helical domain RMA_RS03915 IPR013105 Tetratricopeptide TPR2 RMA_RS03915 IPR019734 Tetratricopeptide repeat RMA_RS03920 IPR019476 Type IV secretion system, TraD, DNA-binding domain RMA_RS03920 IPR022585 TraD coupling protein, N-terminal RMA_RS03920 IPR027417 P-loop containing nucleoside triphosphate hydrolase RMA_RS03925 IPR006842 Transposase (putative), YhgA-like RMA_RS03925 IPR010106 Conserved hypothetical protein CHP01784 RMA_RS03930 IPR002694 Zinc finger, CHC2-type RMA_RS03930 IPR005053 MobA/MobL protein RMA_RS03930 IPR006171 Toprim domain RMA_RS03930 IPR027417 P-loop containing nucleoside triphosphate hydrolase RMA_RS03935 IPR002525 Transposase, IS111A/IS1328/IS1533, N-terminal RMA_RS03935 IPR003346 Transposase, IS116/IS110/IS902 RMA_RS03935 IPR011257 DNA glycosylase RMA_RS03950 IPR002611 IstB-like ATP-binding protein RMA_RS03950 IPR003593 AAA+ ATPase domain RMA_RS03950 IPR020591 Chromosomal replication control, initiator DnaA-like RMA_RS03950 IPR027417 P-loop containing nucleoside triphosphate hydrolase RMA_RS03950 IPR028350 DNA replication protein DnaC/insertion sequence putative ATP-binding protein RMA_RS03960 IPR002686 Transposase IS200-like RMA_RS03965 IPR001584 Integrase, catalytic core RMA_RS03965 IPR012337 Ribonuclease H-like domain RMA_RS03970 IPR027417 P-loop containing nucleoside triphosphate hydrolase RMA_RS03975 IPR002514 Transposase IS3/IS911family RMA_RS03975 IPR009057 Homeodomain-like RMA_RS03980 IPR001584 Integrase, catalytic core RMA_RS03980 IPR012337 Ribonuclease H-like domain RMA_RS03980 IPR025948 HTH-like domain RMA_RS03985 IPR001584 Integrase, catalytic core RMA_RS03985 IPR009057 Homeodomain-like RMA_RS03985 IPR012337 Ribonuclease H-like domain RMA_RS03985 IPR025246 Transposase IS30-like HTH domain RMA_RS03990 IPR001584 Integrase, catalytic core RMA_RS03990 IPR009057 Homeodomain-like RMA_RS03990 IPR012337 Ribonuclease H-like domain RMA_RS03995 IPR002611 IstB-like ATP-binding protein RMA_RS03995 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 RMA_RS03995 IPR027417 P-loop containing nucleoside triphosphate hydrolase RMA_RS04005 IPR002559 Transposase, IS4-like RMA_RS04005 IPR003201 Transposase Tn5, dimerisation RMA_RS04005 IPR012337 Ribonuclease H-like domain RMA_RS04005 IPR014735 Transposase, Tn5-like, N-terminal RMA_RS04005 IPR014736 Transposase, Tn5-like, core RMA_RS04005 IPR014737 Transposase, Tn5-like, C-terminal RMA_RS04010 IPR011708 Bacterial DNA polymerase III, alpha subunit RMA_RS04015 IPR009444 Conjugal transfer, TraD, alpha-type RMA_RS04020 IPR003607 HD/PDEase domain RMA_RS04025 IPR003594 Histidine kinase-like ATPase, C-terminal domain RMA_RS04025 IPR004358 Signal transduction histidine kinase-related protein, C-terminal RMA_RS04030 IPR002052 DNA methylase, N-6 adenine-specific, conserved site RMA_RS04030 IPR012263 Adenine modification methylase, M.EcoRV-type RMA_RS04030 IPR012327 D12 class N6 adenine-specific DNA methyltransferase RMA_RS04030 IPR023095 Adenine-specific methyltransferase, domain 2 RMA_RS04030 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like RMA_RS04035 IPR024633 DnaA N-terminal domain RMA_RS04050 IPR003136 Cytidylate kinase RMA_RS04050 IPR011994 Cytidylate kinase domain RMA_RS04050 IPR027417 P-loop containing nucleoside triphosphate hydrolase RMA_RS04055 IPR000110 Ribosomal protein S1 RMA_RS04055 IPR003029 Ribosomal protein S1, RNA-binding domain RMA_RS04055 IPR012340 Nucleic acid-binding, OB-fold RMA_RS04055 IPR022967 RNA-binding domain, S1 RMA_RS04060 IPR001907 ATP-dependent Clp protease proteolytic subunit RMA_RS04060 IPR018215 ClpP, active site RMA_RS04060 IPR023562 Clp protease proteolytic subunit /Translocation-enhancing protein TepA RMA_RS04060 IPR029045 ClpP/crotonase-like domain RMA_RS04060 IPR033135 RMA_RS04060 RMA_RS04090 IPR016181 Acyl-CoA N-acyltransferase RMA_RS04095 IPR000262 FMN-dependent dehydrogenase RMA_RS04095 IPR011179 Isopentenyl-diphosphate delta-isomerase, FMN-dependent RMA_RS04095 IPR013785 Aldolase-type TIM barrel RMA_RS04105 IPR016181 Acyl-CoA N-acyltransferase RMA_RS04110 IPR000182 GNAT domain RMA_RS04110 IPR016181 Acyl-CoA N-acyltransferase RMA_RS04115 IPR009362 Protein of unknown function DUF1016 RMA_RS04120 IPR009362 Protein of unknown function DUF1016 RMA_RS04150 IPR025877 MobA-like NTP transferase domain RMA_RS04150 IPR029044 Nucleotide-diphospho-sugar transferases RMA_RS04155 IPR002876 Transcriptional regulator TACO1-like RMA_RS04155 IPR017856 Integrase, N-terminal zinc-binding domain-like RMA_RS04155 IPR026563 Transcriptional regulator TACO1-like, domain 2 RMA_RS04155 IPR026564 Transcriptional regulator TACO1-like, domain 3 RMA_RS04155 IPR029072 YebC-like RMA_RS04160 IPR000473 Ribosomal protein L36 RMA_RS04175 IPR008258 Lytic transglycosylase-like SLT domain RMA_RS04175 IPR023346 Lysozyme-like domain RMA_RS04180 IPR024386 Protein of unknown function DUF2532 RMA_RS04215 IPR013216 Methyltransferase type 11 RMA_RS04215 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like RMA_RS04220 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain RMA_RS04220 IPR006258 Dihydrolipoamide dehydrogenase RMA_RS04220 IPR012999 Pyridine nucleotide-disulphide oxidoreductase, class I, active site RMA_RS04220 IPR016156 FAD/NAD-linked reductase, dimerisation domain RMA_RS04220 IPR023753 Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain RMA_RS04225 IPR002698 5-formyltetrahydrofolate cyclo-ligase RMA_RS04225 IPR024185 5-formyltetrahydrofolate cyclo-ligase-like domain RMA_RS04235 IPR002121 HRDC domain RMA_RS04235 IPR002562 3'-5' exonuclease domain RMA_RS04235 IPR010997 HRDC-like RMA_RS04235 IPR012337 Ribonuclease H-like domain RMA_RS04240 IPR003734 Protein of unknown function DUF155 RMA_RS04245 IPR013977 Glycine cleavage T-protein, C-terminal barrel domain RMA_RS04245 IPR017703 YgfZ/GcvT conserved site RMA_RS04245 IPR022436 Rickettsia palindromic element RPE2 RMA_RS04250 IPR002110 Ankyrin repeat RMA_RS04250 IPR020683 Ankyrin repeat-containing domain RMA_RS04260 IPR003594 Histidine kinase-like ATPase, C-terminal domain RMA_RS04260 IPR003661 Signal transduction histidine kinase EnvZ-like, dimerisation/phosphoacceptor domain RMA_RS04265 IPR003594 Histidine kinase-like ATPase, C-terminal domain RMA_RS04270 IPR003507 Muramoyl-tetrapeptide carboxypeptidase RMA_RS04270 IPR027461 LD-carboxypeptidase A, C-terminal domain RMA_RS04270 IPR027478 Murein tetrapeptide carboxypeptidase, N-terminal domain RMA_RS04270 IPR029062 Class I glutamine amidotransferase-like RMA_RS04275 IPR000860 Tetrapyrrole biosynthesis, hydroxymethylbilane synthase RMA_RS04275 IPR005728 Rickettsial palindromic element RMA_RS04275 IPR022417 Porphobilinogen deaminase, N-terminal RMA_RS04275 IPR022418 Porphobilinogen deaminase, C-terminal RMA_RS04275 IPR022419 Porphobilinogen deaminase, dipyrromethane cofactor binding site RMA_RS04295 IPR002305 Aminoacyl-tRNA synthetase, class Ic RMA_RS04295 IPR002306 Tryptophan-tRNA ligase RMA_RS04295 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold RMA_RS04295 IPR024109 Tryptophan-tRNA ligase, bacterial-type RMA_RS04300 IPR002123 Phospholipid/glycerol acyltransferase RMA_RS04305 IPR019291 Host attachment protein RMA_RS04315 IPR000383 Xaa-Pro dipeptidyl-peptidase-like domain RMA_RS04315 IPR029058 Alpha/Beta hydrolase fold RMA_RS04325 IPR022436 Rickettsia palindromic element RPE2 RMA_RS04330 IPR003754 Tetrapyrrole biosynthesis, uroporphyrinogen III synthase RMA_RS04335 IPR001123 Lysine-type exporter protein (LYSE/YGGA) RMA_RS04340 IPR011701 Major facilitator superfamily RMA_RS04340 IPR020846 Major facilitator superfamily domain RMA_RS04355 IPR004667 ADP/ATP carrier protein RMA_RS04370 IPR000092 Polyprenyl synthetase RMA_RS04370 IPR008949 Terpenoid synthase RMA_RS04370 IPR017446 Polyprenyl synthetase-related RMA_RS04385 IPR000587 Creatinase, N-terminal RMA_RS04385 IPR000994 Peptidase M24, structural domain RMA_RS04385 IPR005728 Rickettsial palindromic element RMA_RS04385 IPR028980 Creatinase/Aminopeptidase P, N-terminal RMA_RS04385 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal RMA_RS04385 IPR032416 RMA_RS04385 RMA_RS04390 IPR002293 Amino acid/polyamine transporter I RMA_RS04405 IPR000361 FeS cluster biogenesis RMA_RS04405 IPR016092 FeS cluster insertion protein RMA_RS04405 IPR017870 FeS cluster insertion, C-terminal, conserved site RMA_RS04410 IPR002871 NIF system FeS cluster assembly, NifU, N-terminal RMA_RS04410 IPR011339 ISC system FeS cluster assembly, IscU scaffold RMA_RS04415 IPR000192 Aminotransferase class V domain RMA_RS04415 IPR010240 Cysteine desulfurase RMA_RS04415 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 RMA_RS04415 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 RMA_RS04415 IPR015424 Pyridoxal phosphate-dependent transferase RMA_RS04415 IPR016454 Cysteine desulfurase, NifS RMA_RS04415 IPR020578 Aminotransferase class-V pyridoxal-phosphate binding site RMA_RS04420 IPR000192 Aminotransferase class V domain RMA_RS04420 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 RMA_RS04420 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 RMA_RS04420 IPR015424 Pyridoxal phosphate-dependent transferase RMA_RS04420 IPR016454 Cysteine desulfurase, NifS RMA_RS04420 IPR020578 Aminotransferase class-V pyridoxal-phosphate binding site RMA_RS04425 IPR000944 Transcription regulator Rrf2-like RMA_RS04425 IPR011991 Winged helix-turn-helix DNA-binding domain RMA_RS04450 IPR009574 Protein of unknown function DUF1189 RMA_RS04450 IPR020846 Major facilitator superfamily domain RMA_RS04455 IPR006842 Transposase (putative), YhgA-like RMA_RS04475 IPR011989 Armadillo-like helical RMA_RS04475 IPR016024 Armadillo-type fold RMA_RS04500 IPR001750 NADH:ubiquinone/plastoquinone oxidoreductase RMA_RS04500 IPR010096 NAD(P)H-quinone oxidoreductase, subunit N/subunit 2 RMA_RS04510 IPR001731 Porphobilinogen synthase RMA_RS04510 IPR013785 Aldolase-type TIM barrel RMA_RS04520 IPR001650 Helicase, C-terminal RMA_RS04520 IPR005259 Primosomal protein n RMA_RS04520 IPR011545 DEAD/DEAH box helicase domain RMA_RS04520 IPR014001 Helicase, superfamily 1/2, ATP-binding domain RMA_RS04520 IPR027417 P-loop containing nucleoside triphosphate hydrolase RMA_RS04525 IPR003382 Flavoprotein RMA_RS04525 IPR004507 Decarboxylase UbiX/Pad1 RMA_RS04530 IPR007692 DNA helicase, DnaB type RMA_RS04530 IPR007693 DNA helicase, DnaB-like, N-terminal RMA_RS04530 IPR007694 DNA helicase, DnaB-like, C-terminal RMA_RS04530 IPR016136 DNA helicase DnaB, N-terminal/DNA primase DnaG, C-terminal RMA_RS04530 IPR027417 P-loop containing nucleoside triphosphate hydrolase RMA_RS04535 IPR018227 Tryptophan/tyrosine permease RMA_RS04545 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F RMA_RS04545 IPR002942 RNA-binding S4 domain RMA_RS04545 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F RMA_RS04545 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site RMA_RS04545 IPR020103 Pseudouridine synthase, catalytic domain RMA_RS04550 IPR001646 Pentapeptide repeat RMA_RS04555 IPR002052 DNA methylase, N-6 adenine-specific, conserved site RMA_RS04555 IPR005728 Rickettsial palindromic element RMA_RS04555 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like RMA_RS04560 IPR003593 AAA+ ATPase domain RMA_RS04560 IPR004504 DNA repair protein RadA RMA_RS04560 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup RMA_RS04560 IPR020568 Ribosomal protein S5 domain 2-type fold RMA_RS04560 IPR027417 P-loop containing nucleoside triphosphate hydrolase RMA_RS04570 IPR003717 Recombination protein O, RecO RMA_RS04570 IPR012340 Nucleic acid-binding, OB-fold RMA_RS04570 IPR022572 DNA replication/recombination mediator RecO, N-terminal RMA_RS04575 IPR010985 Ribbon-helix-helix RMA_RS04575 IPR013321 Arc-type ribbon-helix-helix RMA_RS04580 IPR000905 Gcp-like domain RMA_RS04580 IPR022496 tRNA threonylcarbamoyl adenosine modification protein YeaZ RMA_RS04590 IPR000178 Translation initiation factor aIF-2, bacterial-like RMA_RS04590 IPR005225 Small GTP-binding protein domain RMA_RS04590 IPR006847 Translation initiation factor IF-2, N-terminal RMA_RS04590 IPR009000 Translation protein, beta-barrel domain RMA_RS04590 IPR023115 Translation initiation factor IF- 2, domain 3 RMA_RS04590 IPR027417 P-loop containing nucleoside triphosphate hydrolase RMA_RS04595 IPR003029 Ribosomal protein S1, RNA-binding domain RMA_RS04595 IPR004087 K Homology domain RMA_RS04595 IPR009019 K homology domain, prokaryotic type RMA_RS04595 IPR010213 Transcription termination factor NusA RMA_RS04595 IPR010214 Transcription termination factor NusA, C-terminal duplication RMA_RS04595 IPR010995 DNA repair Rad51/transcription factor NusA, alpha-helical RMA_RS04595 IPR012340 Nucleic acid-binding, OB-fold RMA_RS04595 IPR013735 Transcription factor NusA, N-terminal RMA_RS04595 IPR015946 K homology domain-like, alpha/beta RMA_RS04595 IPR022967 RNA-binding domain, S1 RMA_RS04595 IPR025249 KH domain, NusA-like RMA_RS04595 IPR030842 RMA_RS04595 RMA_RS04600 IPR003728 Ribosome maturation factor RimP RMA_RS04600 IPR028989 Ribosome maturation factor RimP, N-terminal RMA_RS04600 IPR028998 Ribosome maturation factor RimP, C-terminal RMA_RS04615 IPR002877 Ribosomal RNA methyltransferase FtsJ domain RMA_RS04615 IPR002942 RNA-binding S4 domain RMA_RS04615 IPR004538 Haemolysin A RMA_RS04615 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like RMA_RS04620 IPR002305 Aminoacyl-tRNA synthetase, class Ic RMA_RS04620 IPR002307 Tyrosine-tRNA ligase RMA_RS04620 IPR002942 RNA-binding S4 domain RMA_RS04620 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold RMA_RS04620 IPR024088 Tyrosine-tRNA ligase, bacterial-type RMA_RS04620 IPR024107 Tyrosine-tRNA ligase, bacterial-type, type 1 RMA_RS04630 IPR022148 Protein of unknown function DUF3680 RMA_RS04700 IPR001611 Leucine-rich repeat RMA_RS04700 IPR032675 RMA_RS04700 RMA_RS04715 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase RMA_RS04720 IPR001599 Alpha-2-macroglobulin RMA_RS04720 IPR002890 Alpha-2-macroglobulin, N-terminal RMA_RS04720 IPR008930 Terpenoid cyclases/protein prenyltransferase alpha-alpha toroid RMA_RS04720 IPR011625 Alpha-2-macroglobulin, N-terminal 2 RMA_RS04720 IPR021868 Alpha-2-macroglobulin MG1 domain RMA_RS04745 IPR029057 Phosphoribosyltransferase-like RMA_RS04775 IPR002938 Monooxygenase, FAD-binding RMA_RS04775 IPR005728 Rickettsial palindromic element RMA_RS04775 IPR010971 Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/UbiI/COQ6 RMA_RS04775 IPR011295 2-polyprenyl-6-methoxyphenol 4-hydroxylase RMA_RS04775 IPR018168 Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6, conserved site RMA_RS04775 IPR023753 Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain RMA_RS04780 IPR007208 Na(+)/H(+) antiporter subunit F-like RMA_RS04785 IPR001789 Signal transduction response regulator, receiver domain RMA_RS04785 IPR002078 RNA polymerase sigma factor 54 interaction domain RMA_RS04785 IPR002197 DNA binding HTH domain, Fis-type RMA_RS04785 IPR003593 AAA+ ATPase domain RMA_RS04785 IPR009057 Homeodomain-like RMA_RS04785 IPR011006 CheY-like superfamily RMA_RS04785 IPR025944 Sigma-54 interaction domain, conserved site RMA_RS04785 IPR027417 P-loop containing nucleoside triphosphate hydrolase RMA_RS04790 IPR001646 Pentapeptide repeat RMA_RS04800 IPR001460 Penicillin-binding protein, transpeptidase RMA_RS04800 IPR005311 Penicillin-binding protein, dimerisation domain RMA_RS04800 IPR012338 Beta-lactamase/transpeptidase-like RMA_RS04800 IPR017790 Penicillin-binding protein 2 RMA_RS04815 IPR001460 Penicillin-binding protein, transpeptidase RMA_RS04815 IPR005311 Penicillin-binding protein, dimerisation domain RMA_RS04815 IPR012338 Beta-lactamase/transpeptidase-like RMA_RS04825 IPR002903 Ribosomal RNA small subunit methyltransferase H RMA_RS04825 IPR023397 S-adenosyl-L-methionine-dependent methyltransferase, MraW, recognition domain RMA_RS04825 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like RMA_RS04830 IPR003444 MraZ RMA_RS04830 IPR020603 MraZ domain RMA_RS04845 IPR001734 Sodium/solute symporter RMA_RS04860 IPR000305 GIY-YIG nuclease superfamily RMA_RS04860 IPR001162 UvrC family homology region RMA_RS04860 IPR001943 UVR domain RMA_RS04860 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 RMA_RS04860 IPR004791 UvrABC system, subunit C RMA_RS04860 IPR010994 RuvA domain 2-like RMA_RS04860 IPR027299 GIY-YIG domain RMA_RS04865 IPR007410 DR1885-like metal-binding protein RMA_RS04870 IPR014825 DNA alkylation repair enzyme RMA_RS04870 IPR016024 Armadillo-type fold RMA_RS04880 IPR001497 Methylated-DNA-[protein]-cysteine S-methyltransferase, active site RMA_RS04880 IPR008332 Methylguanine DNA methyltransferase, ribonuclease-like domain RMA_RS04880 IPR011991 Winged helix-turn-helix DNA-binding domain RMA_RS04880 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding RMA_RS04915 IPR020683 Ankyrin repeat-containing domain RMA_RS04935 IPR000185 Protein translocase subunit SecA RMA_RS04935 IPR004027 SEC-C motif RMA_RS04935 IPR011115 SecA DEAD-like, N-terminal RMA_RS04935 IPR011116 SecA Wing/Scaffold RMA_RS04935 IPR011130 SecA preprotein, cross-linking domain RMA_RS04935 IPR020937 SecA conserved site RMA_RS04935 IPR027417 P-loop containing nucleoside triphosphate hydrolase RMA_RS04945 IPR002582 Holo-[acyl carrier protein] synthase RMA_RS04945 IPR004568 Phosphopantethiene-protein transferase domain RMA_RS04945 IPR008278 4'-phosphopantetheinyl transferase superfamily RMA_RS04950 IPR003716 DNA-directed RNA polymerase, omega subunit RMA_RS04950 IPR006110 RNA polymerase, subunit omega/K/RPB6 RMA_RS04950 IPR012293 RNA polymerase subunit, RPB6/omega RMA_RS04955 IPR001986 Enolpyruvate transferase domain RMA_RS04955 IPR005750 UDP-N-acetylglucosamine 1-carboxyvinyltransferase RMA_RS04955 IPR013792 RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta RMA_RS04960 IPR000565 DNA topoisomerase, type IIA, subunit B RMA_RS04960 IPR001241 DNA topoisomerase, type IIA RMA_RS04960 IPR002288 DNA gyrase B subunit, C-terminal RMA_RS04960 IPR003594 Histidine kinase-like ATPase, C-terminal domain RMA_RS04960 IPR006171 Toprim domain RMA_RS04960 IPR011557 DNA gyrase, subunit B RMA_RS04960 IPR013506 DNA topoisomerase, type IIA, subunit B, domain 2 RMA_RS04960 IPR013759 DNA topoisomerase, type IIA, central domain RMA_RS04960 IPR013760 DNA topoisomerase, type IIA-like domain RMA_RS04960 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup RMA_RS04960 IPR018522 DNA topoisomerase, type IIA, conserved site RMA_RS04960 IPR020568 Ribosomal protein S5 domain 2-type fold RMA_RS04965 IPR006356 HAD-superfamily hydrolase, subfamily IIA, hypothetical 3 RMA_RS04965 IPR006357 HAD-superfamily hydrolase, subfamily IIA RMA_RS04965 IPR023214 HAD-like domain RMA_RS04975 IPR000644 CBS domain RMA_RS04975 IPR006667 SLC41 divalent cation transporters, integral membrane domain RMA_RS04975 IPR006668 Magnesium transporter, MgtE intracellular domain RMA_RS04975 IPR006669 Magnesium transporter MgtE RMA_RS04985 IPR003607 HD/PDEase domain RMA_RS04995 IPR020846 Major facilitator superfamily domain RMA_RS05010 IPR010985 Ribbon-helix-helix RMA_RS05015 IPR003849 Preprotein translocase YajC RMA_RS05020 IPR001036 Acriflavin resistance protein RMA_RS05020 IPR005791 Protein translocase subunit SecD RMA_RS05020 IPR022645 Protein-export membrane protein SecD/SecF, bacterial RMA_RS05020 IPR022813 Protein-export membrane protein SecD/SecF, archaeal and bacterial RMA_RS05025 IPR003782 Copper chaperone SCO1/SenC RMA_RS05025 IPR012336 Thioredoxin-like fold RMA_RS05030 IPR004329 CcmE/CycJ protein RMA_RS05030 IPR012340 Nucleic acid-binding, OB-fold RMA_RS05035 IPR008162 Inorganic pyrophosphatase RMA_RS05040 IPR004268 Flagellin assembly, membrane protein MviN RMA_RS05040 IPR005728 Rickettsial palindromic element RMA_RS05045 IPR008875 TraX RMA_RS05055 IPR001650 Helicase, C-terminal RMA_RS05055 IPR011545 DEAD/DEAH box helicase domain RMA_RS05055 IPR012340 Nucleic acid-binding, OB-fold RMA_RS05055 IPR014001 Helicase, superfamily 1/2, ATP-binding domain RMA_RS05055 IPR027417 P-loop containing nucleoside triphosphate hydrolase RMA_RS05055 IPR033454 RMA_RS05055 RMA_RS05070 IPR004165 Coenzyme A transferase family I RMA_RS05070 IPR012791 3-oxoacid CoA-transferase, subunit B RMA_RS05075 IPR029039 Flavoprotein-like RMA_RS05080 IPR029039 Flavoprotein-like RMA_RS05085 IPR003124 WH2 domain RMA_RS05090 IPR000715 Glycosyl transferase, family 4 RMA_RS05090 IPR003524 Phospho-N-acetylmuramoyl-pentapeptide transferase RMA_RS05090 IPR018480 Phospho-N-acetylmuramoyl-pentapeptide transferase, conserved site RMA_RS05095 IPR000713 Mur ligase, N-terminal RMA_RS05095 IPR004101 Mur ligase, C-terminal RMA_RS05095 IPR005863 UDP-MurNAc-pentapeptide synthetase RMA_RS05095 IPR013221 Mur ligase, central RMA_RS05100 IPR000713 Mur ligase, N-terminal RMA_RS05100 IPR004101 Mur ligase, C-terminal RMA_RS05100 IPR005761 UDP-N-acetylmuramoylalanyl-D-glutamate-2,6-diaminopimelate ligase RMA_RS05100 IPR013221 Mur ligase, central RMA_RS05105 IPR001650 Helicase, C-terminal RMA_RS05105 IPR003711 CarD-like/TRCF domain RMA_RS05105 IPR004576 Transcription-repair coupling factor RMA_RS05105 IPR005118 Transcription-repair-coupling factor, C-terminal domain RMA_RS05105 IPR011545 DEAD/DEAH box helicase domain RMA_RS05105 IPR014001 Helicase, superfamily 1/2, ATP-binding domain RMA_RS05105 IPR027417 P-loop containing nucleoside triphosphate hydrolase RMA_RS05110 IPR005631 Flavinator of succinate dehydrogenase RMA_RS05115 IPR001763 Rhodanese-like domain RMA_RS05120 IPR001957 Chromosomal replication control, initiator DnaA RMA_RS05120 IPR003593 AAA+ ATPase domain RMA_RS05120 IPR010921 Trp repressor/replication initiator RMA_RS05120 IPR013159 Chromosomal replication initiator, DnaA C-terminal RMA_RS05120 IPR013317 Chromosomal replication control, initiator (DnaA)/regulator (Hda) RMA_RS05120 IPR018312 Chromosomal replication control, initiator DnaA, conserved site RMA_RS05120 IPR020591 Chromosomal replication control, initiator DnaA-like RMA_RS05120 IPR024633 DnaA N-terminal domain RMA_RS05120 IPR027417 P-loop containing nucleoside triphosphate hydrolase RMA_RS05150 IPR002641 Patatin/Phospholipase A2-related RMA_RS05150 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase RMA_RS05160 IPR004396 Ribosome-binding ATPase YchF/Obg-like ATPase 1 RMA_RS05160 IPR006073 GTP binding domain RMA_RS05160 IPR012675 Beta-grasp domain RMA_RS05160 IPR012676 TGS-like RMA_RS05160 IPR013029 Domain of unknown function DUF933 RMA_RS05160 IPR023192 TGS-like domain RMA_RS05160 IPR027417 P-loop containing nucleoside triphosphate hydrolase RMA_RS05165 IPR016181 Acyl-CoA N-acyltransferase RMA_RS05175 IPR001328 Peptidyl-tRNA hydrolase RMA_RS05175 IPR018171 Peptidyl-tRNA hydrolase, conserved site RMA_RS05180 IPR001021 Ribosomal protein L25, long-form RMA_RS05180 IPR011035 Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain RMA_RS05180 IPR020055 Ribosomal protein L25, short-form RMA_RS05180 IPR020056 Ribosomal protein L25/Gln-tRNA synthetase, beta-barrel domain RMA_RS05180 IPR020057 Ribosomal protein L25, beta domain RMA_RS05180 IPR029751 Ribosomal protein L25 RMA_RS05190 IPR007197 Radical SAM RMA_RS05190 IPR013785 Aldolase-type TIM barrel RMA_RS05190 IPR024924 7-carboxy-7-deazaguanine synthase-like RMA_RS05195 IPR001706 Ribosomal protein L35, non-mitochondrial RMA_RS05195 IPR018265 Ribosomal protein L35, conserved site RMA_RS05195 IPR021137 Ribosomal protein L35 RMA_RS05200 IPR005813 Ribosomal protein L20 RMA_RS05205 IPR000271 Ribosomal protein L34 RMA_RS05205 IPR020939 Ribosomal protein L34, conserved site RMA_RS05210 IPR000100 Ribonuclease P RMA_RS05210 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup RMA_RS05210 IPR020539 Ribonuclease P, conserved site RMA_RS05210 IPR020568 Ribosomal protein S5 domain 2-type fold RMA_RS05215 IPR020683 Ankyrin repeat-containing domain RMA_RS05235 IPR002686 Transposase IS200-like RMA_RS05240 IPR002523 Mg2+ transporter protein, CorA-like/Zinc transport protein ZntB RMA_RS05245 IPR002686 Transposase IS200-like RMA_RS05255 IPR025668 Transposase DDE domain RMA_RS05280 IPR000515 MetI-like domain RMA_RS05280 IPR003594 Histidine kinase-like ATPase, C-terminal domain RMA_RS05280 IPR003660 HAMP linker domain RMA_RS05280 IPR003661 Signal transduction histidine kinase EnvZ-like, dimerisation/phosphoacceptor domain RMA_RS05280 IPR004358 Signal transduction histidine kinase-related protein, C-terminal RMA_RS05285 IPR001911 Ribosomal protein S21 RMA_RS05290 IPR012762 Ubiquinone biosynthesis protein COQ9 RMA_RS05290 IPR013718 COQ9 RMA_RS05305 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site RMA_RS05305 IPR002300 Aminoacyl-tRNA synthetase, class Ia RMA_RS05305 IPR002301 Isoleucine-tRNA ligase RMA_RS05305 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain RMA_RS05305 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding RMA_RS05305 IPR013155 Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding RMA_RS05305 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold RMA_RS05305 IPR023586 Isoleucine-tRNA ligase, type 2 RMA_RS05325 IPR000089 Biotin/lipoyl attachment RMA_RS05325 IPR001882 Biotin-binding site RMA_RS05325 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain RMA_RS05325 IPR005481 Carbamoyl-phosphate synthase, large subunit, N-terminal RMA_RS05325 IPR005482 Biotin carboxylase, C-terminal RMA_RS05325 IPR011053 Single hybrid motif RMA_RS05325 IPR011054 Rudiment single hybrid motif RMA_RS05325 IPR013815 ATP-grasp fold, subdomain 1 RMA_RS05325 IPR013816 ATP-grasp fold, subdomain 2 RMA_RS05325 IPR016185 Pre-ATP-grasp domain RMA_RS05330 IPR000022 Carboxyl transferase RMA_RS05330 IPR029045 ClpP/crotonase-like domain RMA_RS05340 IPR002686 Transposase IS200-like RMA_RS05345 IPR000873 AMP-dependent synthetase/ligase RMA_RS05345 IPR002123 Phospholipid/glycerol acyltransferase RMA_RS05345 IPR011701 Major facilitator superfamily RMA_RS05345 IPR020845 AMP-binding, conserved site RMA_RS05345 IPR020846 Major facilitator superfamily domain RMA_RS05350 IPR007076 TfoX, N-terminal RMA_RS05355 IPR001626 ABC-3 RMA_RS05355 IPR029022 ABC transporter, BtuC-like RMA_RS05360 IPR005728 Rickettsial palindromic element RMA_RS05360 IPR010233 Ubiquinone biosynthesis O-methyltransferase RMA_RS05360 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like RMA_RS05365 IPR000924 Glutamyl/glutaminyl-tRNA synthetase RMA_RS05365 IPR004527 Glutamate-tRNA ligase, bacterial/mitochondrial RMA_RS05365 IPR005728 Rickettsial palindromic element RMA_RS05365 IPR008925 Aminoacyl-tRNA synthetase, class I, anticodon-binding RMA_RS05365 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold RMA_RS05365 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain RMA_RS05365 IPR020061 Glutamyl/glutaminyl-tRNA synthetase, class Ib, alpha-bundle domain RMA_RS05365 IPR020751 Aminoacyl-tRNA synthetase, class I, anticodon-binding domain, subdomain 2 RMA_RS05370 IPR010642 Invasion protein B RMA_RS05380 IPR002686 Transposase IS200-like RMA_RS05385 IPR003607 HD/PDEase domain RMA_RS05390 IPR007685 RelA/SpoT RMA_RS05395 IPR001844 Chaperonin Cpn60 RMA_RS05395 IPR002423 Chaperonin Cpn60/TCP-1 RMA_RS05395 IPR018370 Chaperonin Cpn60, conserved site RMA_RS05395 IPR027409 GroEL-like apical domain RMA_RS05395 IPR027413 GroEL-like equatorial domain RMA_RS05400 IPR011032 GroES (chaperonin 10)-like RMA_RS05400 IPR018369 Chaperonin Cpn10, conserved site RMA_RS05400 IPR020818 Chaperonin Cpn10 RMA_RS05435 IPR001247 Exoribonuclease, phosphorolytic domain 1 RMA_RS05435 IPR002381 Ribonuclease phosphorolytic, bacterial-type RMA_RS05435 IPR015847 Exoribonuclease, phosphorolytic domain 2 RMA_RS05435 IPR018336 Ribonuclease PH, conserved site RMA_RS05435 IPR020568 Ribosomal protein S5 domain 2-type fold RMA_RS05435 IPR027408 PNPase/RNase PH domain RMA_RS05440 IPR000740 GrpE nucleotide exchange factor RMA_RS05440 IPR009012 GrpE nucleotide exchange factor, head RMA_RS05440 IPR013805 GrpE nucleotide exchange factor, coiled-coil RMA_RS05445 IPR002549 Uncharacterised protein family UPF0118 RMA_RS05450 IPR027417 P-loop containing nucleoside triphosphate hydrolase RMA_RS05455 IPR020846 Major facilitator superfamily domain RMA_RS05480 IPR002583 Ribosomal protein S20 RMA_RS05485 IPR000456 Ribosomal protein L17 RMA_RS05490 IPR009025 DNA-directed RNA polymerase, RBP11-like dimerisation domain RMA_RS05490 IPR011260 RNA polymerase, alpha subunit, C-terminal RMA_RS05490 IPR011262 DNA-directed RNA polymerase, insert domain RMA_RS05490 IPR011263 DNA-directed RNA polymerase, RpoA/D/Rpb3-type RMA_RS05490 IPR011773 DNA-directed RNA polymerase, alpha subunit RMA_RS05495 IPR001971 Ribosomal protein S11 RMA_RS05495 IPR018102 Ribosomal S11, conserved site RMA_RS05495 IPR019981 Ribosomal protein S11, bacterial-type RMA_RS05500 IPR001892 Ribosomal protein S13 RMA_RS05500 IPR010979 Ribosomal protein S13-like, H2TH RMA_RS05500 IPR018269 Ribosomal protein S13, conserved site RMA_RS05500 IPR019980 Ribosomal protein S13, bacterial-type RMA_RS05500 IPR027437 30s ribosomal protein S13, C-terminal RMA_RS05505 IPR000850 Adenylate kinase/UMP-CMP kinase RMA_RS05505 IPR006259 Adenylate kinase subfamily RMA_RS05505 IPR007862 Adenylate kinase, active site lid domain RMA_RS05505 IPR027417 P-loop containing nucleoside triphosphate hydrolase RMA_RS05510 IPR002208 SecY/SEC61-alpha family RMA_RS05510 IPR023201 SecY subunit domain RMA_RS05510 IPR026593 Protein translocase subunit SecY RMA_RS05510 IPR030659 RMA_RS05510 RMA_RS05515 IPR005749 Ribosomal protein L15, bacterial-type RMA_RS05515 IPR021131 Ribosomal protein L18e/L15P RMA_RS05515 IPR030878 RMA_RS05515 RMA_RS05520 IPR005996 Ribosomal protein L30, bacterial-type RMA_RS05520 IPR016082 Ribosomal protein L30, ferredoxin-like fold domain RMA_RS05525 IPR000851 Ribosomal protein S5 RMA_RS05525 IPR005324 Ribosomal protein S5, C-terminal RMA_RS05525 IPR005712 Ribosomal protein S5, bacterial-type RMA_RS05525 IPR013810 Ribosomal protein S5, N-terminal RMA_RS05525 IPR014720 Double-stranded RNA-binding domain RMA_RS05525 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup RMA_RS05525 IPR018192 Ribosomal protein S5, N-terminal, conserved site RMA_RS05525 IPR020568 Ribosomal protein S5 domain 2-type fold RMA_RS05530 IPR004389 Ribosomal protein L18, bacterial-type RMA_RS05530 IPR005484 Ribosomal protein L18/L5 RMA_RS05535 IPR000702 Ribosomal protein L6 RMA_RS05535 IPR002358 Ribosomal protein L6, conserved site RMA_RS05535 IPR019906 Ribosomal protein L6, bacterial-type RMA_RS05535 IPR020040 Ribosomal protein L6, alpha-beta domain RMA_RS05540 IPR000630 Ribosomal protein S8 RMA_RS05545 IPR001209 Ribosomal protein S14 RMA_RS05545 IPR018271 Ribosomal protein S14, conserved site RMA_RS05545 IPR023036 Ribosomal protein S14, bacterial/plastid RMA_RS05550 IPR002132 Ribosomal protein L5 RMA_RS05550 IPR020929 Ribosomal protein L5, conserved site RMA_RS05550 IPR020930 Ribosomal protein L5, bacterial-type RMA_RS05550 IPR022803 Ribosomal protein L5 domain RMA_RS05550 IPR031309 RMA_RS05550 RMA_RS05550 IPR031310 RMA_RS05550 RMA_RS05555 IPR003256 Ribosomal protein L24 RMA_RS05555 IPR005824 KOW RMA_RS05555 IPR005825 Ribosomal protein L24/L26, conserved site RMA_RS05555 IPR008991 Translation protein SH3-like domain RMA_RS05555 IPR014722 Ribosomal protein L2 domain 2 RMA_RS05560 IPR000218 Ribosomal protein L14b/L23e RMA_RS05560 IPR005745 Ribosomal protein L14, bacterial-type RMA_RS05560 IPR019972 Ribosomal protein L14 conserved site RMA_RS05565 IPR000266 Ribosomal protein S17 RMA_RS05565 IPR012340 Nucleic acid-binding, OB-fold RMA_RS05565 IPR019979 Ribosomal protein S17, conserved site RMA_RS05565 IPR019984 Ribosomal protein S17, bacterial-type RMA_RS05570 IPR001854 Ribosomal protein L29 RMA_RS05575 IPR000114 Ribosomal protein L16 RMA_RS05575 IPR016180 Ribosomal protein L10e/L16 RMA_RS05575 IPR020798 Ribosomal protein L16, conserved site RMA_RS05580 IPR001351 Ribosomal protein S3, C-terminal RMA_RS05580 IPR004044 K Homology domain, type 2 RMA_RS05580 IPR004087 K Homology domain RMA_RS05580 IPR005704 Ribosomal protein S3, bacterial RMA_RS05580 IPR009019 K homology domain, prokaryotic type RMA_RS05580 IPR015946 K homology domain-like, alpha/beta RMA_RS05580 IPR018280 Ribosomal protein S3, conserved site RMA_RS05585 IPR001063 Ribosomal protein L22/L17 RMA_RS05585 IPR005727 Ribosomal protein L22, bacterial/chloroplast-type RMA_RS05585 IPR018260 Ribosomal protein L22/L17, conserved site RMA_RS05590 IPR002222 Ribosomal protein S19/S15 RMA_RS05590 IPR005732 Ribosomal protein S19, bacterial-type RMA_RS05590 IPR020934 Ribosomal protein S19 conserved site RMA_RS05590 IPR023575 Ribosomal protein S19, superfamily RMA_RS05595 IPR002171 Ribosomal protein L2 RMA_RS05595 IPR005880 Ribosomal protein L2, bacterial/organellar-type RMA_RS05595 IPR008991 Translation protein SH3-like domain RMA_RS05595 IPR012340 Nucleic acid-binding, OB-fold RMA_RS05595 IPR014722 Ribosomal protein L2 domain 2 RMA_RS05595 IPR014726 Ribosomal protein L2, domain 3 RMA_RS05595 IPR022666 Ribosomal Proteins L2, RNA binding domain RMA_RS05595 IPR022669 Ribosomal protein L2, C-terminal RMA_RS05595 IPR022671 Ribosomal protein L2, conserved site RMA_RS05600 IPR012677 Nucleotide-binding, alpha-beta plait RMA_RS05600 IPR012678 Ribosomal protein L23/L15e core domain RMA_RS05600 IPR013025 Ribosomal protein L25/L23 RMA_RS05605 IPR002136 Ribosomal protein L4/L1e RMA_RS05605 IPR013005 Ribosomal protein L4/L1e, bacterial-type RMA_RS05605 IPR023574 Ribosomal protein L4 domain RMA_RS05610 IPR000597 Ribosomal protein L3 RMA_RS05610 IPR009000 Translation protein, beta-barrel domain RMA_RS05610 IPR019926 Ribosomal protein L3, conserved site RMA_RS05610 IPR019927 Ribosomal protein L3, bacterial/organelle-type RMA_RS05615 IPR001848 Ribosomal protein S10 RMA_RS05615 IPR027486 Ribosomal protein S10 domain RMA_RS05620 IPR000795 Elongation factor, GTP-binding domain RMA_RS05620 IPR004160 Translation elongation factor EFTu/EF1A, C-terminal RMA_RS05620 IPR004161 Translation elongation factor EFTu/EF1A, domain 2 RMA_RS05620 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle RMA_RS05620 IPR005225 Small GTP-binding protein domain RMA_RS05620 IPR009000 Translation protein, beta-barrel domain RMA_RS05620 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal RMA_RS05620 IPR027417 P-loop containing nucleoside triphosphate hydrolase RMA_RS05620 IPR031157 RMA_RS05620 RMA_RS05635 IPR001537 tRNA/rRNA methyltransferase, SpoU type RMA_RS05635 IPR004441 RNA methyltransferase TrmH family RMA_RS05635 IPR013123 RNA 2-O ribose methyltransferase, substrate binding RMA_RS05635 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal RMA_RS05635 IPR029028 Alpha/beta knot methyltransferases RMA_RS05635 IPR029064 50S ribosomal protein L30e-like RMA_RS05645 IPR000362 Fumarate lyase family RMA_RS05645 IPR005677 Fumarate hydratase, class II RMA_RS05645 IPR008948 L-Aspartase-like RMA_RS05645 IPR018951 Fumarase C, C-terminal RMA_RS05645 IPR020557 Fumarate lyase, conserved site RMA_RS05645 IPR022761 Fumarate lyase, N-terminal RMA_RS05645 IPR024083 Fumarase/histidase, N-terminal RMA_RS05650 IPR006442 Type II toxin-antitoxin system, antitoxin Phd/YefM RMA_RS05655 IPR029060 PIN domain-like RMA_RS05660 IPR000158 Cell division protein FtsZ RMA_RS05660 IPR003008 Tubulin/FtsZ, GTPase domain RMA_RS05660 IPR008280 Tubulin/FtsZ, C-terminal RMA_RS05660 IPR018316 Tubulin/FtsZ, 2-layer sandwich domain RMA_RS05660 IPR020805 Cell division protein FtsZ, conserved site RMA_RS05660 IPR024757 Cell division protein FtsZ, C-terminal RMA_RS05680 IPR001075 NIF system FeS cluster assembly, NifU, C-terminal RMA_RS05680 IPR014824 Scaffold protein Nfu/NifU, N-terminal RMA_RS05680 IPR017065 HIRA-interacting protein 5 RMA_RS05685 IPR011701 Major facilitator superfamily RMA_RS05685 IPR020846 Major facilitator superfamily domain RMA_RS05690 IPR001650 Helicase, C-terminal RMA_RS05690 IPR011545 DEAD/DEAH box helicase domain RMA_RS05690 IPR014001 Helicase, superfamily 1/2, ATP-binding domain RMA_RS05690 IPR027417 P-loop containing nucleoside triphosphate hydrolase RMA_RS05695 IPR002059 Cold-shock protein, DNA-binding RMA_RS05695 IPR011129 Cold shock protein RMA_RS05695 IPR012156 Cold shock, CspA RMA_RS05695 IPR012340 Nucleic acid-binding, OB-fold RMA_RS05695 IPR019844 Cold-shock conserved site RMA_RS05705 IPR001737 Ribosomal RNA adenine methylase transferase RMA_RS05705 IPR011530 Ribosomal RNA adenine dimethylase RMA_RS05705 IPR020596 Ribosomal RNA adenine methylase transferase, conserved site RMA_RS05705 IPR020598 Ribosomal RNA adenine methylase transferase, N-terminal RMA_RS05705 IPR022436 Rickettsia palindromic element RPE2 RMA_RS05705 IPR023165 rRNA adenine dimethylase-like RMA_RS05705 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like RMA_RS05710 IPR027304 Trigger factor/SurA domain RMA_RS05715 IPR007543 Organic solvent tolerance protein, C-terminal RMA_RS05715 IPR020889 Lipopolysaccharide assembly, LptD RMA_RS05725 IPR003753 Exonuclease VII, large subunit RMA_RS05725 IPR020579 Exonuclease VII, large subunit, C-terminal RMA_RS05725 IPR025824 OB-fold nucleic acid binding domain RMA_RS05740 IPR004808 AP endonuclease 1 RMA_RS05740 IPR005135 Endonuclease/exonuclease/phosphatase RMA_RS05740 IPR020847 AP endonuclease 1, binding site RMA_RS05750 IPR005225 Small GTP-binding protein domain RMA_RS05750 IPR006073 GTP binding domain RMA_RS05750 IPR015946 K homology domain-like, alpha/beta RMA_RS05750 IPR016484 GTP-binding protein EngA RMA_RS05750 IPR027417 P-loop containing nucleoside triphosphate hydrolase RMA_RS05750 IPR032859 RMA_RS05750 RMA_RS05775 IPR004147 UbiB domain RMA_RS05775 IPR010232 Probable protein kinase UbiB RMA_RS05775 IPR011009 Protein kinase-like domain RMA_RS05780 IPR004033 UbiE/COQ5 methyltransferase RMA_RS05780 IPR023576 UbiE/COQ5 methyltransferase, conserved site RMA_RS05780 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like RMA_RS05785 IPR010663 Zinc finger, DNA glycosylase/AP lyase/isoleucyl tRNA synthetase RMA_RS05785 IPR010979 Ribosomal protein S13-like, H2TH RMA_RS05785 IPR012319 DNA glycosylase/AP lyase, catalytic domain RMA_RS05785 IPR015886 DNA glycosylase/AP lyase, H2TH DNA-binding RMA_RS05785 IPR015887 DNA glycosylase/AP lyase, zinc finger domain, DNA-binding site RMA_RS05785 IPR020629 Formamidopyrimidine-DNA glycosylase RMA_RS05795 IPR029044 Nucleotide-diphospho-sugar transferases RMA_RS05800 IPR002686 Transposase IS200-like RMA_RS05815 IPR009656 PHB de-polymerase, C-terminal RMA_RS05815 IPR010915 Polyhydroxyalkanoate depolymerase RMA_RS05815 IPR029058 Alpha/Beta hydrolase fold RMA_RS05825 IPR001130 TatD family RMA_RS05825 IPR015991 Uncharacterised deoxyribonuclease TatD-type RMA_RS05825 IPR018228 Deoxyribonuclease, TatD-related, conserved site RMA_RS05825 IPR022439 Rickettsia palindromic element RPE4 RMA_RS05825 IPR032466 RMA_RS05825 RMA_RS05830 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding RMA_RS05830 IPR013155 Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding RMA_RS05830 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold RMA_RS05830 IPR014758 Methionyl-tRNA synthetase RMA_RS05830 IPR015413 Methionyl/Leucyl tRNA synthetase RMA_RS05830 IPR023457 Methionine-tRNA synthetase, type 2 RMA_RS05835 IPR018094 Thymidylate kinase RMA_RS05835 IPR018095 Thymidylate kinase, conserved site RMA_RS05835 IPR027417 P-loop containing nucleoside triphosphate hydrolase RMA_RS05840 IPR005828 General substrate transporter RMA_RS05840 IPR020846 Major facilitator superfamily domain RMA_RS05845 IPR000537 UbiA prenyltransferase family RMA_RS05845 IPR006370 4-hydroxybenzoate polyprenyl transferase RMA_RS05845 IPR030470 RMA_RS05845 RMA_RS05855 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site RMA_RS05855 IPR002300 Aminoacyl-tRNA synthetase, class Ia RMA_RS05855 IPR002303 Valine-tRNA ligase RMA_RS05855 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain RMA_RS05855 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding RMA_RS05855 IPR013155 Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding RMA_RS05855 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold RMA_RS05855 IPR022874 Valine-tRNA ligase, type 2 RMA_RS05860 IPR007074 LicD RMA_RS05865 IPR007074 LicD RMA_RS05880 IPR003798 DNA recombination RmuC RMA_RS05920 IPR018729 Protein of unknown function DUF2269, transmembrane RMA_RS05925 IPR003593 AAA+ ATPase domain RMA_RS05925 IPR003959 ATPase, AAA-type, core RMA_RS05925 IPR004487 Clp protease, ATP-binding subunit ClpX RMA_RS05925 IPR010603 Zinc finger, ClpX C4-type RMA_RS05925 IPR019489 Clp ATPase, C-terminal RMA_RS05925 IPR027417 P-loop containing nucleoside triphosphate hydrolase RMA_RS05930 IPR000182 GNAT domain RMA_RS05930 IPR016181 Acyl-CoA N-acyltransferase RMA_RS05935 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold RMA_RS05935 IPR018317 Queuosine biosynthesis protein QueC RMA_RS05940 IPR008651 Uncharacterised protein family HicB RMA_RS05940 IPR010985 Ribbon-helix-helix RMA_RS05950 IPR003439 ABC transporter-like RMA_RS05950 IPR003593 AAA+ ATPase domain RMA_RS05950 IPR011527 ABC transporter type 1, transmembrane domain RMA_RS05950 IPR017871 ABC transporter, conserved site RMA_RS05950 IPR027417 P-loop containing nucleoside triphosphate hydrolase RMA_RS05955 IPR024247 Protein of unknown function DUF2673 RMA_RS05960 IPR011701 Major facilitator superfamily RMA_RS05960 IPR020846 Major facilitator superfamily domain RMA_RS05965 IPR003838 Permease FtsX-like RMA_RS05965 IPR011925 Lipoprotein releasing system, transmembrane protein, LolC/E family RMA_RS05965 IPR025857 MacB-like periplasmic core domain RMA_RS05970 IPR003439 ABC transporter-like RMA_RS05970 IPR003593 AAA+ ATPase domain RMA_RS05970 IPR017871 ABC transporter, conserved site RMA_RS05970 IPR027417 P-loop containing nucleoside triphosphate hydrolase RMA_RS05975 IPR003653 Peptidase C48, SUMO/Sentrin/Ubl1 RMA_RS05980 IPR000644 CBS domain RMA_RS05980 IPR002550 Domain of unknown function DUF21 RMA_RS05980 IPR005170 Transporter-associated domain RMA_RS05980 IPR016166 FAD-binding, type 2 RMA_RS05980 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 RMA_RS05985 IPR002541 Cytochrome c assembly protein RMA_RS05985 IPR003567 Cytochrome c-type biogenesis protein RMA_RS05985 IPR032523 RMA_RS05985 RMA_RS06000 IPR005546 Autotransporter beta-domain RMA_RS06000 IPR006315 Outer membrane autotransporter barrel RMA_RS06000 IPR022095 Rickettsia outer membrane protein B RMA_RS06005 IPR007685 RelA/SpoT RMA_RS06010 IPR002686 Transposase IS200-like RMA_RS06015 IPR001764 Glycoside hydrolase, family 3, N-terminal RMA_RS06015 IPR017853 Glycoside hydrolase, superfamily RMA_RS06025 IPR000119 Histone-like bacterial DNA-binding protein RMA_RS06025 IPR010992 Integration host factor (IHF)-like DNA-binding domain RMA_RS06030 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant RMA_RS06030 IPR012336 Thioredoxin-like fold RMA_RS06030 IPR024706 Peroxiredoxin, AhpC-type RMA_RS06035 IPR004960 Bacterial lipid A biosynthesis acyltransferase RMA_RS06040 IPR003758 Tetraacyldisaccharide 4'-kinase RMA_RS06040 IPR027417 P-loop containing nucleoside triphosphate hydrolase RMA_RS06045 IPR011055 Duplicated hybrid motif RMA_RS06045 IPR016047 Peptidase M23 RMA_RS06055 IPR001357 BRCT domain RMA_RS06055 IPR001679 NAD-dependent DNA ligase RMA_RS06055 IPR004150 NAD-dependent DNA ligase, OB-fold RMA_RS06055 IPR010994 RuvA domain 2-like RMA_RS06055 IPR012340 Nucleic acid-binding, OB-fold RMA_RS06055 IPR013839 NAD-dependent DNA ligase, adenylation RMA_RS06055 IPR013840 NAD-dependent DNA ligase, N-terminal RMA_RS06055 IPR018239 NAD-dependent DNA ligase, active site RMA_RS06055 IPR033136 RMA_RS06055 RMA_RS06060 IPR002616 tRNA-guanine(15) transglycosylase-like RMA_RS06060 IPR004803 Queuine tRNA-ribosyltransferase RMA_RS06085 IPR003399 Mammalian cell entry-related RMA_RS06085 IPR030970 RMA_RS06085 RMA_RS06090 IPR007763 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 12 RMA_RS06095 IPR002156 Ribonuclease H domain RMA_RS06095 IPR012337 Ribonuclease H-like domain RMA_RS06095 IPR022892 Ribonuclease H RMA_RS06100 IPR007481 Stringent starvation protein B RMA_RS06105 IPR010415 Protein of unknown function DUF1009 RMA_RS06110 IPR001977 Dephospho-CoA kinase RMA_RS06110 IPR027417 P-loop containing nucleoside triphosphate hydrolase RMA_RS06115 IPR006054 DNA polymerase III, epsilon subunit RMA_RS06115 IPR006309 DNA polymerase 3, epsilon subunit RMA_RS06115 IPR012337 Ribonuclease H-like domain RMA_RS06115 IPR013520 Exonuclease, RNase T/DNA polymerase III RMA_RS06120 IPR002994 Surfeit locus 1/Shy1 RMA_RS06125 IPR000212 DNA helicase, UvrD/REP type RMA_RS06125 IPR014016 UvrD-like Helicase, ATP-binding domain RMA_RS06125 IPR014017 DNA helicase, UvrD-like, C-terminal RMA_RS06125 IPR027417 P-loop containing nucleoside triphosphate hydrolase RMA_RS06135 IPR001227 Acyl transferase domain RMA_RS06135 IPR004410 Malonyl CoA-acyl carrier protein transacylase, FabD-type RMA_RS06135 IPR014043 Acyl transferase RMA_RS06135 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase RMA_RS06135 IPR016036 Malonyl-CoA ACP transacylase, ACP-binding RMA_RS06135 IPR020801 Polyketide synthase, acyl transferase domain RMA_RS06135 IPR024925 Malonyl CoA-acyl carrier protein transacylase RMA_RS06190 IPR000073 Alpha/beta hydrolase fold-1 RMA_RS06190 IPR029058 Alpha/Beta hydrolase fold RMA_RS06195 IPR004667 ADP/ATP carrier protein RMA_RS06200 IPR000086 NUDIX hydrolase domain RMA_RS06200 IPR015797 NUDIX hydrolase domain-like RMA_RS06215 IPR000644 CBS domain RMA_RS06215 IPR005170 Transporter-associated domain RMA_RS06215 IPR016166 FAD-binding, type 2 RMA_RS06215 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 RMA_RS06220 IPR002036 Endoribonuclease YbeY RMA_RS06220 IPR020549 Endoribonuclease YbeY, conserved site RMA_RS06220 IPR023091 Metalloprotease catalytic domain, predicted RMA_RS06225 IPR003477 mRNA interferase PemK-like protein RMA_RS06225 IPR011067 Plasmid maintenance toxin/Cell growth inhibitor RMA_RS06230 IPR003698 Lipoyl synthase RMA_RS06230 IPR006638 Elongator protein 3/MiaB/NifB RMA_RS06230 IPR007197 Radical SAM RMA_RS06230 IPR013785 Aldolase-type TIM barrel RMA_RS06230 IPR031691 RMA_RS06230 RMA_RS06235 IPR001085 Serine hydroxymethyltransferase RMA_RS06235 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 RMA_RS06235 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 RMA_RS06235 IPR015424 Pyridoxal phosphate-dependent transferase RMA_RS06235 IPR019798 Serine hydroxymethyltransferase, pyridoxal phosphate binding site RMA_RS06240 IPR003140 Phospholipase/carboxylesterase/thioesterase RMA_RS06240 IPR029058 Alpha/Beta hydrolase fold RMA_RS06245 IPR002109 Glutaredoxin RMA_RS06245 IPR004480 Monothiol glutaredoxin-related RMA_RS06245 IPR012336 Thioredoxin-like fold RMA_RS06245 IPR014434 Monothiol glutaredoxin RMA_RS06250 IPR000445 Helix-hairpin-helix motif RMA_RS06250 IPR003265 HhH-GPD domain RMA_RS06250 IPR003651 Endonuclease III-like, iron-sulphur cluster loop motif RMA_RS06250 IPR004036 Endonuclease III-like, conserved site-2 RMA_RS06250 IPR005759 Endonuclease III RMA_RS06250 IPR011257 DNA glycosylase RMA_RS06250 IPR023170 Helix-turn-helix, base-excision DNA repair, C-terminal RMA_RS06270 IPR012556 Entericidin EcnAB RMA_RS06285 IPR000878 Tetrapyrrole methylase RMA_RS06285 IPR008189 rRNA small subunit methyltransferase I RMA_RS06285 IPR014776 Tetrapyrrole methylase, subdomain 2 RMA_RS06285 IPR014777 Tetrapyrrole methylase, subdomain 1 RMA_RS06285 IPR018063 SAM-dependent methyltransferase RsmI, conserved site RMA_RS06290 IPR028081 Leucine-binding protein domain RMA_RS06290 IPR028082 Periplasmic binding protein-like I RMA_RS06295 IPR003369 Sec-independent protein translocase protein TatA/B/E RMA_RS06295 IPR006312 Sec-independent protein translocase protein TatA/E RMA_RS06300 IPR007686 YutG/PgpA domain RMA_RS06300 IPR026037 Phosphatidylglycerophosphatase A RMA_RS06300 IPR027416 YutG-like domain RMA_RS06305 IPR001787 Ribosomal protein L21 RMA_RS06305 IPR018258 Ribosomal protein L21, conserved site RMA_RS06305 IPR028909 Ribosomal protein L21-like RMA_RS06310 IPR001684 Ribosomal protein L27 RMA_RS06310 IPR018261 Ribosomal protein L27, conserved site RMA_RS06315 IPR001048 Aspartate/glutamate/uridylate kinase RMA_RS06315 IPR001057 Glutamate/acetylglutamate kinase RMA_RS06315 IPR001341 Aspartate kinase domain RMA_RS06315 IPR005260 Aspartate kinase, monofunctional class RMA_RS06315 IPR018042 Aspartate kinase, conserved site RMA_RS06320 IPR001387 Cro/C1-type helix-turn-helix domain RMA_RS06320 IPR010982 Lambda repressor-like, DNA-binding domain RMA_RS06330 IPR001279 Beta-lactamase-like RMA_RS06345 IPR011701 Major facilitator superfamily RMA_RS06345 IPR020846 Major facilitator superfamily domain RMA_RS06350 IPR007838 Cell division protein ZapA-like RMA_RS06355 IPR005728 Rickettsial palindromic element RMA_RS06360 IPR010982 Lambda repressor-like, DNA-binding domain RMA_RS06365 IPR007780 Bacterial NAD-glutamate dehydrogenase RMA_RS06365 IPR016040 NAD(P)-binding domain RMA_RS06365 IPR028971 NAD-glutamate dehydrogenase RMA_RS06370 IPR004520 tRNA modification GTPase MnmE RMA_RS06370 IPR005225 Small GTP-binding protein domain RMA_RS06370 IPR006073 GTP binding domain RMA_RS06370 IPR018948 GTP-binding protein TrmE, N-terminal RMA_RS06370 IPR025867 tRNA modification GTPase MnmE C-terminal domain RMA_RS06370 IPR027266 GTP-binding protein TrmE/Glycine cleavage system T protein, domain 1 RMA_RS06370 IPR027368 tRNA modification GTPase MnmE domain 2 RMA_RS06370 IPR027417 P-loop containing nucleoside triphosphate hydrolase RMA_RS06375 IPR020182 Uncharacterised protein family RP760 RMA_RS06390 IPR020846 Major facilitator superfamily domain RMA_RS06400 IPR003593 AAA+ ATPase domain RMA_RS06400 IPR013765 DNA recombination and repair protein RecA RMA_RS06400 IPR020584 DNA recombination/repair protein RecA, conserved site RMA_RS06400 IPR023400 DNA recombination and repair protein RecA, C-terminal RMA_RS06400 IPR027417 P-loop containing nucleoside triphosphate hydrolase RMA_RS06405 IPR002347 Glucose/ribitol dehydrogenase RMA_RS06405 IPR011284 3-oxoacyl-(acyl-carrier-protein) reductase RMA_RS06405 IPR016040 NAD(P)-binding domain RMA_RS06405 IPR020904 Short-chain dehydrogenase/reductase, conserved site RMA_RS06410 IPR003231 Acyl carrier protein (ACP) RMA_RS06410 IPR009081 Acyl carrier protein-like RMA_RS06415 IPR014030 Beta-ketoacyl synthase, N-terminal RMA_RS06415 IPR014031 Beta-ketoacyl synthase, C-terminal RMA_RS06415 IPR016039 Thiolase-like RMA_RS06415 IPR017568 3-oxoacyl-[acyl-carrier-protein] synthase 2 RMA_RS06415 IPR018201 Beta-ketoacyl synthase, active site RMA_RS06415 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain RMA_RS06420 IPR001487 Bromodomain RMA_RS06420 IPR003439 ABC transporter-like RMA_RS06420 IPR003593 AAA+ ATPase domain RMA_RS06420 IPR017871 ABC transporter, conserved site RMA_RS06420 IPR027417 P-loop containing nucleoside triphosphate hydrolase RMA_RS06420 IPR032524 RMA_RS06420 RMA_RS06435 IPR025420 Domain of unknown function DUF4143 RMA_RS06435 IPR027417 P-loop containing nucleoside triphosphate hydrolase RMA_RS06440 IPR005728 Rickettsial palindromic element RMA_RS06440 IPR008145 Guanylate kinase/L-type calcium channel beta subunit RMA_RS06440 IPR017665 Guanylate kinase RMA_RS06440 IPR020590 Guanylate kinase, conserved site RMA_RS06440 IPR027417 P-loop containing nucleoside triphosphate hydrolase RMA_RS06445 IPR001387 Cro/C1-type helix-turn-helix domain RMA_RS06445 IPR010982 Lambda repressor-like, DNA-binding domain RMA_RS06450 IPR007221 Rod shape-determining protein MreC RMA_RS06455 IPR004753 Cell shape determining protein MreB/Mrl RMA_RS06460 IPR005495 Permease YjgP/YjgQ, predicted RMA_RS06470 IPR006664 Outer membrane protein, bacterial RMA_RS06470 IPR006665 Outer membrane protein, OmpA/MotB, C-terminal RMA_RS06470 IPR014169 Peptidoglycan-associated lipoprotein RMA_RS06475 IPR004655 3-oxoacyl-[acyl-carrier-protein] synthase 3 RMA_RS06475 IPR013747 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C-terminal RMA_RS06475 IPR013751 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III RMA_RS06475 IPR016039 Thiolase-like RMA_RS06480 IPR002677 Ribosomal protein L32p RMA_RS06480 IPR011332 Zinc-binding ribosomal protein RMA_RS06485 IPR007450 Lipoprotein SmpA/OmlA RMA_RS06490 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain RMA_RS06490 IPR003593 AAA+ ATPase domain RMA_RS06490 IPR004390 Signal-recognition particle receptor FtsY RMA_RS06490 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle RMA_RS06490 IPR027417 P-loop containing nucleoside triphosphate hydrolase RMA_RS06495 IPR001098 DNA-directed DNA polymerase, family A, palm domain RMA_RS06495 IPR002298 DNA polymerase A RMA_RS06495 IPR002421 5'-3' exonuclease, N-terminal RMA_RS06495 IPR008918 Helix-hairpin-helix motif, class 2 RMA_RS06495 IPR012337 Ribonuclease H-like domain RMA_RS06495 IPR018320 DNA polymerase 1 RMA_RS06495 IPR019760 DNA-directed DNA polymerase, family A, conserved site RMA_RS06495 IPR020045 5'-3' exonuclease, C-terminal domain RMA_RS06495 IPR020046 5'-3' exonuclease, alpha-helical arch, N-terminal RMA_RS06495 IPR029060 PIN domain-like RMA_RS06500 IPR002133 S-adenosylmethionine synthetase RMA_RS06500 IPR022628 S-adenosylmethionine synthetase, N-terminal RMA_RS06500 IPR022636 S-adenosylmethionine synthetase superfamily RMA_RS06505 IPR002133 S-adenosylmethionine synthetase RMA_RS06505 IPR022629 S-adenosylmethionine synthetase, central domain RMA_RS06505 IPR022636 S-adenosylmethionine synthetase superfamily RMA_RS06510 IPR002133 S-adenosylmethionine synthetase RMA_RS06510 IPR022630 S-adenosylmethionine synthetase, C-terminal RMA_RS06510 IPR022636 S-adenosylmethionine synthetase superfamily RMA_RS06535 IPR003141 Polymerase/histidinol phosphatase, N-terminal RMA_RS06535 IPR004013 PHP, C-terminal RMA_RS06535 IPR004805 DNA polymerase III, alpha subunit RMA_RS06535 IPR011708 Bacterial DNA polymerase III, alpha subunit RMA_RS06535 IPR012340 Nucleic acid-binding, OB-fold RMA_RS06535 IPR016195 Polymerase/histidinol phosphatase-like RMA_RS06535 IPR029460 DNA polymerase, helix-hairpin-helix motif RMA_RS06540 IPR001732 UDP-glucose/GDP-mannose dehydrogenase, N-terminal RMA_RS06540 IPR008927 6-phosphogluconate dehydrogenase, C-terminal-like RMA_RS06540 IPR014026 UDP-glucose/GDP-mannose dehydrogenase, dimerisation RMA_RS06540 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal RMA_RS06540 IPR016040 NAD(P)-binding domain RMA_RS06540 IPR017476 UDP-glucose/GDP-mannose dehydrogenase RMA_RS06540 IPR028357 UDP-glucose 6-dehydrogenase, bacterial type RMA_RS06545 IPR025263 Domain of unknown function DUF3971 RMA_RS06545 IPR032712 RMA_RS06545 RMA_RS06550 IPR011701 Major facilitator superfamily RMA_RS06550 IPR020846 Major facilitator superfamily domain RMA_RS06555 IPR002033 Sec-independent periplasmic protein translocase TatC RMA_RS06555 IPR019820 Sec-independent periplasmic protein translocase, conserved site RMA_RS06560 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ H/ P/ S), conserved domain RMA_RS06560 IPR002317 Serine-tRNA ligase, type1 RMA_RS06560 IPR010978 tRNA-binding arm RMA_RS06560 IPR015866 Serine-tRNA synthetase, type1, N-terminal RMA_RS06565 IPR004346 CagE, TrbE, VirB component of type IV transporter system RMA_RS06565 IPR018145 CagE, TrbE, VirB component of type IV transporter system, central domain RMA_RS06565 IPR027417 P-loop containing nucleoside triphosphate hydrolase RMA_RS06575 IPR005496 Integral membrane protein TerC RMA_RS06575 IPR022369 Integral membrane protein TerC, riboswitch-linked RMA_RS06580 IPR011250 Outer membrane protein/outer membrane enzyme PagP , beta-barrel RMA_RS06580 IPR027385 Outer membrane protein beta-barrel RMA_RS06585 IPR018773 Methyltransferase regulatory domain, predicted RMA_RS06585 IPR025714 Methyltransferase domain RMA_RS06585 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like RMA_RS06595 IPR001387 Cro/C1-type helix-turn-helix domain RMA_RS06595 IPR010982 Lambda repressor-like, DNA-binding domain RMA_RS06600 IPR001457 NADH:ubiquinone/plastoquinone oxidoreductase, chain 6 RMA_RS06605 IPR001133 NADH-ubiquinone oxidoreductase chain 4L/K RMA_RS06610 IPR001516 NADH:ubiquinone oxidoreductase, chain 5/L, N-terminal RMA_RS06610 IPR001750 NADH:ubiquinone/plastoquinone oxidoreductase RMA_RS06610 IPR003945 NADH-plastoquinone oxidoreductase, chain 5 RMA_RS06610 IPR018393 NADH-plastoquinone oxidoreductase, chain 5 subgroup RMA_RS06615 IPR001750 NADH:ubiquinone/plastoquinone oxidoreductase RMA_RS06615 IPR003918 NADH:ubiquinone oxidoreductase RMA_RS06615 IPR010227 NADH-quinone oxidoreductase, chain M/4 RMA_RS06625 IPR003439 ABC transporter-like RMA_RS06625 IPR003593 AAA+ ATPase domain RMA_RS06625 IPR005895 ABC transporter, haem export, CcmA RMA_RS06625 IPR027417 P-loop containing nucleoside triphosphate hydrolase RMA_RS06630 IPR010226 NADH-quinone oxidoreductase, chain I RMA_RS06630 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain RMA_RS06630 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site RMA_RS06635 IPR001694 NADH:ubiquinone oxidoreductase, subunit 1/F420H2 oxidoreductase subunit H RMA_RS06635 IPR018086 NADH:ubiquinone oxidoreductase, subunit 1, conserved site RMA_RS06640 IPR000283 NADH:ubiquinone oxidoreductase, 75kDa subunit, conserved site RMA_RS06640 IPR001041 2Fe-2S ferredoxin-type domain RMA_RS06640 IPR006656 Molybdopterin oxidoreductase RMA_RS06640 IPR010228 NADH:ubiquinone oxidoreductase, subunit G RMA_RS06640 IPR012675 Beta-grasp domain RMA_RS06640 IPR015405 NADH-quinone oxidoreductase, chain G, C-terminal RMA_RS06640 IPR019574 NADH:ubiquinone oxidoreductase, subunit G, iron-sulphur binding RMA_RS06650 IPR000573 Aconitase A/isopropylmalate dehydratase small subunit, swivel RMA_RS06650 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha RMA_RS06650 IPR006249 Aconitate/iron regulatory protein 2 RMA_RS06650 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel RMA_RS06650 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 RMA_RS06650 IPR015932 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 2 RMA_RS06650 IPR015937 Aconitase/isopropylmalate dehydratase RMA_RS06650 IPR018136 Aconitase family, 4Fe-4S cluster binding site RMA_RS06655 IPR001469 ATPase, F1 complex, delta/epsilon subunit RMA_RS06655 IPR020546 ATPase, F1 complex, delta/epsilon subunit, N-terminal RMA_RS06660 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain RMA_RS06660 IPR000793 ATPase, F1/V1/A1 complex, alpha/beta subunit, C-terminal RMA_RS06660 IPR003593 AAA+ ATPase domain RMA_RS06660 IPR004100 ATPase, F1 complex alpha/beta subunit, N-terminal domain RMA_RS06660 IPR005722 ATPase, F1 complex, beta subunit RMA_RS06660 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site RMA_RS06660 IPR024034 ATPase, F1 complex beta subunit/V1 complex, C-terminal RMA_RS06660 IPR027417 P-loop containing nucleoside triphosphate hydrolase RMA_RS06665 IPR000131 ATPase, F1 complex, gamma subunit RMA_RS06665 IPR022436 Rickettsia palindromic element RPE2 RMA_RS06665 IPR023633 ATPase, F1 complex, gamma subunit domain RMA_RS06670 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain RMA_RS06670 IPR000793 ATPase, F1/V1/A1 complex, alpha/beta subunit, C-terminal RMA_RS06670 IPR004100 ATPase, F1 complex alpha/beta subunit, N-terminal domain RMA_RS06670 IPR005294 ATPase, F1 complex, alpha subunit RMA_RS06670 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site RMA_RS06670 IPR023366 ATP synthase subunit alpha-like domain RMA_RS06670 IPR027417 P-loop containing nucleoside triphosphate hydrolase RMA_RS06675 IPR000711 ATPase, OSCP/delta subunit RMA_RS06675 IPR026015 F1F0 ATP synthase OSCP/delta subunit, N-terminal domain RMA_RS06680 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain RMA_RS06680 IPR006258 Dihydrolipoamide dehydrogenase RMA_RS06680 IPR012999 Pyridine nucleotide-disulphide oxidoreductase, class I, active site RMA_RS06680 IPR016156 FAD/NAD-linked reductase, dimerisation domain RMA_RS06680 IPR023753 Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain RMA_RS06700 IPR001460 Penicillin-binding protein, transpeptidase RMA_RS06700 IPR012338 Beta-lactamase/transpeptidase-like RMA_RS06710 IPR001264 Glycosyl transferase, family 51 RMA_RS06710 IPR001460 Penicillin-binding protein, transpeptidase RMA_RS06710 IPR012338 Beta-lactamase/transpeptidase-like RMA_RS06710 IPR012340 Nucleic acid-binding, OB-fold RMA_RS06710 IPR023346 Lysozyme-like domain RMA_RS06710 IPR031376 RMA_RS06710 RMA_RS06715 IPR002792 TRAM domain RMA_RS06715 IPR005839 Methylthiotransferase RMA_RS06715 IPR006463 tRNA-i(6)A37 modification enzyme MiaB RMA_RS06715 IPR006638 Elongator protein 3/MiaB/NifB RMA_RS06715 IPR007197 Radical SAM RMA_RS06715 IPR013848 Methylthiotransferase, N-terminal RMA_RS06715 IPR020612 Methylthiotransferase, conserved site RMA_RS06715 IPR023404 Radical SAM, alpha/beta horseshoe RMA_RS06715 IPR023970 Methylthiotransferase/radical SAM-type protein RMA_RS06740 IPR003646 SH3-like domain, bacterial-type RMA_RS06740 IPR010466 Protein of unknown function DUF1058 RMA_RS06745 IPR003148 Regulator of K+ conductance, N-terminal RMA_RS06745 IPR004771 K+/H+ exchanger RMA_RS06745 IPR006153 Cation/H+ exchanger RMA_RS06745 IPR016040 NAD(P)-binding domain RMA_RS06750 IPR004394 Protein Iojap/ribosomal silencing factor RsfS RMA_RS06755 IPR002634 BolA protein RMA_RS06760 IPR025668 Transposase DDE domain RMA_RS06835 IPR004368 Translation initiation factor IF-1 RMA_RS06835 IPR006196 RNA-binding domain, S1, IF1 type RMA_RS06835 IPR012340 Nucleic acid-binding, OB-fold RMA_RS06840 IPR003697 Maf-like protein RMA_RS06840 IPR029001 Inosine triphosphate pyrophosphatase-like RMA_RS06845 IPR000962 Zinc finger, DksA/TraR C4-type RMA_RS06845 IPR012784 RNA polymerase-binding transcription factor DksA RMA_RS06845 IPR020458 Zinc finger, DksA/TraR C4-type conserved site RMA_RS06850 IPR002104 Integrase, catalytic RMA_RS06850 IPR004107 Integrase, SAM-like, N-terminal RMA_RS06850 IPR011010 DNA breaking-rejoining enzyme, catalytic core RMA_RS06850 IPR013762 Integrase-like, catalytic core RMA_RS06850 IPR023009 Tyrosine recombinase XerC/XerD RMA_RS06850 IPR023109 Integrase/recombinase, N-terminal RMA_RS06860 IPR001736 Phospholipase D/Transphosphatidylase RMA_RS06860 IPR025202 Phospholipase D-like domain RMA_RS06875 IPR002830 UbiD decarboxylyase family RMA_RS06875 IPR012349 FMN-binding split barrel RMA_RS06880 IPR000297 Peptidyl-prolyl cis-trans isomerase, PpiC-type RMA_RS06880 IPR027304 Trigger factor/SurA domain RMA_RS06885 IPR005546 Autotransporter beta-domain RMA_RS06885 IPR006315 Outer membrane autotransporter barrel RMA_RS06900 IPR002543 FtsK domain RMA_RS06900 IPR003593 AAA+ ATPase domain RMA_RS06900 IPR011991 Winged helix-turn-helix DNA-binding domain RMA_RS06900 IPR018541 FtsK gamma domain RMA_RS06900 IPR025199 Domain of unknown function DUF4117 RMA_RS06900 IPR027417 P-loop containing nucleoside triphosphate hydrolase RMA_RS06915 IPR000994 Peptidase M24, structural domain RMA_RS06915 IPR001714 Peptidase M24, methionine aminopeptidase RMA_RS06915 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 RMA_RS06930 IPR000715 Glycosyl transferase, family 4 RMA_RS06935 IPR007922 Protein of unknown function DUF721/UPF0232 RMA_RS06935 IPR016507 Uncharacterised conserved protein UCP007061 RMA_RS06940 IPR011250 Outer membrane protein/outer membrane enzyme PagP , beta-barrel RMA_RS06940 IPR027385 Outer membrane protein beta-barrel RMA_RS06945 IPR011250 Outer membrane protein/outer membrane enzyme PagP , beta-barrel RMA_RS06945 IPR027385 Outer membrane protein beta-barrel RMA_RS06950 IPR000813 7Fe ferredoxin RMA_RS06950 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain RMA_RS06950 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site RMA_RS06950 IPR022569 Ferredoxin, C-terminal RMA_RS06955 IPR002541 Cytochrome c assembly protein RMA_RS06955 IPR003557 Cytochrome c-type biogenesis protein CcmC RMA_RS06960 IPR016192 APOBEC/CMP deaminase, zinc-binding RMA_RS06960 IPR016193 Cytidine deaminase-like RMA_RS06960 IPR028883 tRNA-specific adenosine deaminase RMA_RS06965 IPR002524 Cation efflux protein RMA_RS06965 IPR027469 Cation efflux protein transmembrane domain RMA_RS06965 IPR027470 Cation efflux protein cytoplasmic domain RMA_RS06970 IPR008816 Glycine zipper 2TM domain RMA_RS06970 IPR016364 Surface antigen, Rickettsia RMA_RS06970 IPR032635 RMA_RS06970 RMA_RS06980 IPR003439 ABC transporter-like RMA_RS06980 IPR003593 AAA+ ATPase domain RMA_RS06980 IPR017871 ABC transporter, conserved site RMA_RS06980 IPR027417 P-loop containing nucleoside triphosphate hydrolase RMA_RS07010 IPR003439 ABC transporter-like RMA_RS07010 IPR004602 UvrABC system subunit A RMA_RS07010 IPR013815 ATP-grasp fold, subdomain 1 RMA_RS07010 IPR017871 ABC transporter, conserved site RMA_RS07010 IPR027417 P-loop containing nucleoside triphosphate hydrolase RMA_RS07015 IPR000424 Primosome PriB/single-strand DNA-binding RMA_RS07015 IPR011344 Single-stranded DNA-binding protein RMA_RS07015 IPR012340 Nucleic acid-binding, OB-fold RMA_RS07020 IPR029058 Alpha/Beta hydrolase fold RMA_RS07030 IPR002196 Glycoside hydrolase, family 24 RMA_RS07030 IPR023346 Lysozyme-like domain RMA_RS07030 IPR023347 Lysozyme domain RMA_RS07045 IPR003746 Protein of unknown function DUF167 RMA_RS07050 IPR001404 Heat shock protein Hsp90 family RMA_RS07050 IPR003594 Histidine kinase-like ATPase, C-terminal domain RMA_RS07050 IPR019805 Heat shock protein Hsp90, conserved site RMA_RS07050 IPR020568 Ribosomal protein S5 domain 2-type fold RMA_RS07050 IPR020575 Heat shock protein Hsp90, N-terminal RMA_RS07055 IPR001917 Aminotransferase, class-II, pyridoxal-phosphate binding site RMA_RS07055 IPR004839 Aminotransferase, class I/classII RMA_RS07055 IPR010961 Tetrapyrrole biosynthesis, 5-aminolevulinic acid synthase RMA_RS07055 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 RMA_RS07055 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 RMA_RS07055 IPR015424 Pyridoxal phosphate-dependent transferase RMA_RS07065 IPR001179 Peptidyl-prolyl cis-trans isomerase, FKBP-type, domain RMA_RS07065 IPR005215 Trigger factor RMA_RS07065 IPR008880 Trigger factor, C-terminal domain RMA_RS07065 IPR008881 Trigger factor, ribosome-binding, bacterial RMA_RS07065 IPR027304 Trigger factor/SurA domain RMA_RS07070 IPR006073 GTP binding domain RMA_RS07070 IPR006074 GTP1/OBG, conserved site RMA_RS07070 IPR006169 GTP1/OBG domain RMA_RS07070 IPR014100 GTP-binding protein Obg/CgtA RMA_RS07070 IPR027417 P-loop containing nucleoside triphosphate hydrolase RMA_RS07075 IPR002020 Citrate synthase-like RMA_RS07075 IPR010953 Citrate synthase, type I RMA_RS07075 IPR016142 Citrate synthase-like, large alpha subdomain RMA_RS07075 IPR016143 Citrate synthase-like, small alpha subdomain RMA_RS07075 IPR019810 Citrate synthase active site RMA_RS07075 IPR024176 Citrate synthase, bacterial-type RMA_RS07080 IPR001387 Cro/C1-type helix-turn-helix domain RMA_RS07080 IPR010982 Lambda repressor-like, DNA-binding domain RMA_RS07090 IPR005122 Uracil-DNA glycosylase-like RMA_RS07090 IPR005273 Uracil-DNA glycosylase, family 4 domain RMA_RS07095 IPR002942 RNA-binding S4 domain RMA_RS07095 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F RMA_RS07095 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site RMA_RS07095 IPR006225 Pseudouridine synthase, RluC/RluD RMA_RS07095 IPR020103 Pseudouridine synthase, catalytic domain RMA_RS07115 IPR002052 DNA methylase, N-6 adenine-specific, conserved site RMA_RS07115 IPR003358 tRNA (guanine-N-7) methyltransferase RMA_RS07115 IPR004556 Modification methylase HemK RMA_RS07115 IPR007848 Methyltransferase small domain RMA_RS07115 IPR019874 Protein-(glutamine-N5) methyltransferase, release factor-specific RMA_RS07115 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like RMA_RS07120 IPR005145 Putative GTP-binding controlling metal-binding domain RMA_RS07120 IPR006070 YrdC-like domain RMA_RS07120 IPR010923 tRNA threonylcarbamoyladenosine biosynthesis protein SUA5 RMA_RS07120 IPR017945 DHBP synthase RibB-like alpha/beta domain RMA_RS07125 IPR008909 DALR anticodon binding RMA_RS07125 IPR015944 Glycine-tRNA ligase, beta subunit RMA_RS07130 IPR002310 Glycine-tRNA ligase, alpha subunit RMA_RS07135 IPR002716 PIN domain RMA_RS07135 IPR029060 PIN domain-like RMA_RS07140 IPR006442 Type II toxin-antitoxin system, antitoxin Phd/YefM RMA_RS07145 IPR003828 Protein of unknown function DUF208 RMA_RS07160 IPR002347 Glucose/ribitol dehydrogenase RMA_RS07160 IPR016040 NAD(P)-binding domain RMA_RS07160 IPR020904 Short-chain dehydrogenase/reductase, conserved site RMA_RS07165 IPR002099 DNA mismatch repair protein family RMA_RS07165 IPR003594 Histidine kinase-like ATPase, C-terminal domain RMA_RS07165 IPR013507 DNA mismatch repair protein, C-terminal RMA_RS07165 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup RMA_RS07165 IPR014762 DNA mismatch repair, conserved site RMA_RS07165 IPR014790 MutL, C-terminal, dimerisation RMA_RS07165 IPR020568 Ribosomal protein S5 domain 2-type fold RMA_RS07165 IPR020667 DNA mismatch repair protein, MutL RMA_RS07170 IPR001705 Ribosomal protein L33 RMA_RS07170 IPR011332 Zinc-binding ribosomal protein RMA_RS07170 IPR018264 Ribosomal protein L33, conserved site RMA_RS07175 IPR000307 Ribosomal protein S16 RMA_RS07175 IPR020592 Ribosomal protein S16, conserved site RMA_RS07175 IPR023803 Ribosomal protein S16 domain RMA_RS07185 IPR002477 Peptidoglycan binding-like RMA_RS07185 IPR002502 N-acetylmuramoyl-L-alanine amidase domain RMA_RS07190 IPR000544 Octanoyltransferase RMA_RS07190 IPR004143 Biotin/lipoate A/B protein ligase RMA_RS07190 IPR020605 Octanoyltransferase, conserved site RMA_RS07200 IPR004670 Na+/H+ antiporter NhaA RMA_RS07200 IPR023171 Na/H antiporter domain RMA_RS07220 IPR000055 Restriction endonuclease, type I, HsdS RMA_RS07230 IPR000055 Restriction endonuclease, type I, HsdS RMA_RS07235 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site RMA_RS07235 IPR002933 Peptidase M20 RMA_RS07235 IPR005941 Succinyl-diaminopimelate desuccinylase, proteobacteria RMA_RS07235 IPR011650 Peptidase M20, dimerisation domain RMA_RS07245 IPR007459 DNA polymerase III chi subunit, HolC RMA_RS07250 IPR005495 Permease YjgP/YjgQ, predicted RMA_RS07255 IPR007337 RelB antitoxin/Antitoxin DinJ RMA_RS07255 IPR026262 Antitoxin DinJ RMA_RS07260 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase RMA_RS07265 IPR001279 Beta-lactamase-like RMA_RS07270 IPR003439 ABC transporter-like RMA_RS07270 IPR003593 AAA+ ATPase domain RMA_RS07270 IPR027417 P-loop containing nucleoside triphosphate hydrolase RMA_RS07270 IPR030679 RMA_RS07270 RMA_RS07280 IPR001466 Beta-lactamase-related RMA_RS07280 IPR012338 Beta-lactamase/transpeptidase-like RMA_RS07290 IPR001969 Aspartic peptidase, active site RMA_RS07290 IPR011969 Peptidase aspartic, CHP02281 RMA_RS07290 IPR021109 Aspartic peptidase domain RMA_RS07295 IPR004401 Nucleoid-associated protein YbaB RMA_RS07300 IPR003593 AAA+ ATPase domain RMA_RS07300 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal RMA_RS07300 IPR012763 DNA polymerase III, subunit gamma/ tau RMA_RS07300 IPR022754 DNA polymerase III, gamma subunit, domain III RMA_RS07300 IPR027417 P-loop containing nucleoside triphosphate hydrolase RMA_RS07305 IPR004564 Outer membrane lipoprotein carrier protein LolA-like RMA_RS07305 IPR029046 Lipoprotein localisation LolA/LolB/LppX RMA_RS07310 IPR007698 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, NAD(H)-binding domain RMA_RS07310 IPR007886 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, N-terminal RMA_RS07310 IPR016040 NAD(P)-binding domain RMA_RS07315 IPR024605 NAD(P) transhydrogenase, alpha subunit, C-terminal RMA_RS07320 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal RMA_RS07320 IPR006359 Transcription elongation factor GreA RMA_RS07320 IPR018151 Transcription elongation factor, GreA/GreB, conserved site RMA_RS07320 IPR022691 Transcription elongation factor, GreA/GreB, N-terminal RMA_RS07320 IPR023459 Transcription elongation factor GreA/GreB family RMA_RS07320 IPR028624 Transcription elongation factor GreA/GreB RMA_RS07325 IPR032974 RMA_RS07325 RMA_RS07330 IPR002694 Zinc finger, CHC2-type RMA_RS07330 IPR006171 Toprim domain RMA_RS07330 IPR006295 DNA primase, DnaG RMA_RS07330 IPR013264 DNA primase, catalytic core, N-terminal RMA_RS07330 IPR030846 RMA_RS07330 RMA_RS07335 IPR000943 RNA polymerase sigma-70 RMA_RS07335 IPR007127 RNA polymerase sigma factor 70, region 1.1 RMA_RS07335 IPR007624 RNA polymerase sigma-70 region 3 RMA_RS07335 IPR007627 RNA polymerase sigma-70 region 2 RMA_RS07335 IPR007630 RNA polymerase sigma-70 region 4 RMA_RS07335 IPR007631 RNA polymerase sigma factor 70, non-essential domain RMA_RS07335 IPR009042 RNA polymerase sigma-70 region 1.2 RMA_RS07335 IPR011991 Winged helix-turn-helix DNA-binding domain RMA_RS07335 IPR012760 RNA polymerase sigma factor RpoD, C-terminal RMA_RS07335 IPR013324 RNA polymerase sigma factor, region 3/4 RMA_RS07335 IPR013325 RNA polymerase sigma factor, region 2 RMA_RS07335 IPR014284 RNA polymerase sigma-70 like domain RMA_RS07335 IPR028630 RNA polymerase sigma factor RpoD RMA_RS07340 IPR001406 Pseudouridine synthase I, TruA RMA_RS07340 IPR020094 Pseudouridine synthase I, TruA, N-terminal RMA_RS07340 IPR020095 Pseudouridine synthase I, TruA, C-terminal RMA_RS07340 IPR020097 Pseudouridine synthase I, TruA, alpha/beta domain RMA_RS07340 IPR020103 Pseudouridine synthase, catalytic domain RMA_RS07345 IPR002318 Alanine-tRNA ligase, class IIc RMA_RS07345 IPR003156 DHHA1 domain RMA_RS07345 IPR009000 Translation protein, beta-barrel domain RMA_RS07345 IPR012947 Threonyl/alanyl tRNA synthetase, SAD RMA_RS07345 IPR018162 Alanine-tRNA ligase, class IIc, anti-codon-binding domain RMA_RS07345 IPR018163 Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain RMA_RS07345 IPR018164 Alanyl-tRNA synthetase, class IIc, N-terminal RMA_RS07345 IPR023033 Alanine-tRNA ligase, eukaryota/bacteria RMA_RS07355 IPR020135 Uncharacterised protein family RP854 RMA_RS07360 IPR020180 Uncharacterised protein family RP853 RMA_RS07365 IPR020846 Major facilitator superfamily domain RMA_RS07375 IPR011701 Major facilitator superfamily RMA_RS07375 IPR020846 Major facilitator superfamily domain RMA_RS07380 IPR001260 Coproporphyrinogen III oxidase, aerobic RMA_RS07380 IPR018375 Coproporphyrinogen III oxidase, conserved site RMA_RS07395 IPR005265 Uncharacterised protein family UPF0093 RMA_RS07395 IPR014351 Conserved hypothetical protein CHP00701 RMA_RS07400 IPR001015 Ferrochelatase RMA_RS07400 IPR019772 Ferrochelatase, active site RMA_RS07405 IPR000257 Uroporphyrinogen decarboxylase (URO-D) RMA_RS07405 IPR006361 Uroporphyrinogen decarboxylase HemE RMA_RS07450 IPR011004 Trimeric LpxA-like RMA_RS07450 IPR029098 Udp N-acetylglucosamine O-acyltransferase, C-terminal RMA_RS07520 IPR011990 Tetratricopeptide-like helical domain RMA_RS07525 IPR011990 Tetratricopeptide-like helical domain RMA_RS07525 IPR019734 Tetratricopeptide repeat RMA_RS07600 IPR025668 Transposase DDE domain RMA_RS07625 IPR001611 Leucine-rich repeat RMA_RS07625 IPR032675 RMA_RS07625 RMA_RS07640 IPR002052 DNA methylase, N-6 adenine-specific, conserved site RMA_RS07640 IPR003356 DNA methylase, adenine-specific RMA_RS07640 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like