M9Y_RS00015	SM00382	ATPases associated with a variety of cellular activities
M9Y_RS00085	SM00869	Autotransporter beta-domain
M9Y_RS00130	SM01058	CarD-like/TRCF domain
M9Y_RS00175	SM00382	ATPases associated with a variety of cellular activities
M9Y_RS00175	SM01086	C-terminal, D2-small domain, of ClpB protein
M9Y_RS00210	SM00382	ATPases associated with a variety of cellular activities
M9Y_RS00270	SM00562	M9Y_RS00270
M9Y_RS00275	SM01228	M9Y_RS00275
M9Y_RS00290	SM00470	ParB-like nuclease domain
M9Y_RS00295	SM00382	ATPases associated with a variety of cellular activities
M9Y_RS00315	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
M9Y_RS00320	SM00836	DALR anticodon binding domain
M9Y_RS00320	SM01016	Arginyl tRNA synthetase N terminal dom
M9Y_RS00330	SM00434	DNA Topoisomerase IV
M9Y_RS00350	SM00448	cheY-homologous receiver domain
M9Y_RS00350	SM00862	Transcriptional regulatory protein, C terminal
M9Y_RS00400	SM00869	Autotransporter beta-domain
M9Y_RS00425	SM00840	M9Y_RS00425
M9Y_RS00475	SM01005	Alanine racemase, C-terminal domain
M9Y_RS00485	SM00382	ATPases associated with a variety of cellular activities
M9Y_RS00520	SM00382	ATPases associated with a variety of cellular activities
M9Y_RS00580	SM00928	NADH-ubiquinone oxidoreductase-F iron-sulfur binding region
M9Y_RS00590	SM00358	Double-stranded RNA binding motif
M9Y_RS00590	SM00535	Ribonuclease III family
M9Y_RS00615	SM00244	prohibitin homologues
M9Y_RS00620	SM00244	prohibitin homologues
M9Y_RS00625	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
M9Y_RS00630	SM00450	Rhodanese Homology Domain
M9Y_RS00665	SM00838	Elongation factor G C-terminus
M9Y_RS00665	SM00889	Elongation factor G, domain IV
M9Y_RS00680	SM00738	In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold.
M9Y_RS00680	SM00739	KOW (Kyprides, Ouzounis, Woese) motif.
M9Y_RS00685	SM00649	Ribosomal protein L11/L12
M9Y_RS00710	SM00663	RNA polymerase I subunit A N-terminus
M9Y_RS00755	SM00903	Flavin reductase like domain
M9Y_RS00760	SM00062	Bacterial periplasmic substrate-binding proteins
M9Y_RS00760	SM00079	Eukaryotic homologues of bacterial periplasmic substrate binding proteins.
M9Y_RS00765	SM00845	GatB domain
M9Y_RS00815	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
M9Y_RS00860	SM00411	bacterial (prokaryotic) histone like domain
M9Y_RS00870	SM00382	ATPases associated with a variety of cellular activities
M9Y_RS00870	SM00962	SRP54-type protein, GTPase domain
M9Y_RS00870	SM00963	SRP54-type protein, helical bundle domain
M9Y_RS00880	SM00729	Elongator protein 3, MiaB family, Radical SAM
M9Y_RS00905	SM00861	Transketolase, pyrimidine binding domain
M9Y_RS00925	SM00271	DnaJ molecular chaperone homology domain
M9Y_RS01025	SM00271	DnaJ molecular chaperone homology domain
M9Y_RS01035	SM00487	DEAD-like helicases superfamily
M9Y_RS01035	SM00490	helicase superfamily c-terminal domain
M9Y_RS01045	SM00382	ATPases associated with a variety of cellular activities
M9Y_RS01050	SM00434	DNA Topoisomerase IV
M9Y_RS01095	SM00382	ATPases associated with a variety of cellular activities
M9Y_RS01130	SM00863	Threonyl and Alanyl tRNA synthetase second additional domain
M9Y_RS01160	SM00387	Histidine kinase-like ATPases
M9Y_RS01160	SM00433	TopoisomeraseII
M9Y_RS01165	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
M9Y_RS01165	SM00245	tail specific protease
M9Y_RS01170	SM00387	Histidine kinase-like ATPases
M9Y_RS01170	SM00388	His Kinase A (phosphoacceptor) domain
M9Y_RS01185	SM00564	beta-propeller repeat
M9Y_RS01210	SM00267	diguanylate cyclase
M9Y_RS01210	SM00448	cheY-homologous receiver domain
M9Y_RS01215	SM00841	Elongation factor P, C-terminal
M9Y_RS01215	SM01185	M9Y_RS01215
M9Y_RS01255	SM00052	Putative diguanylate phosphodiesterase
M9Y_RS01280	SM00842	Cell division protein FtsA
M9Y_RS01305	SM00316	Ribosomal protein S1-like RNA-binding domain
M9Y_RS01315	SM00363	S4 RNA-binding domain
M9Y_RS01335	SM00861	Transketolase, pyrimidine binding domain
M9Y_RS01345	SM00935	Outer membrane protein (OmpH-like)
M9Y_RS01350	SM01329	M9Y_RS01350
M9Y_RS01520	SM00533	DNA-binding domain of DNA mismatch repair MUTS family
M9Y_RS01520	SM00534	ATPase domain of DNA mismatch repair MUTS family
M9Y_RS01605	SM00382	ATPases associated with a variety of cellular activities
M9Y_RS01610	SM00859	Semialdehyde dehydrogenase, NAD binding domain
M9Y_RS01630	SM00382	ATPases associated with a variety of cellular activities
M9Y_RS01630	SM01086	C-terminal, D2-small domain, of ClpB protein
M9Y_RS01645	SM01219	M9Y_RS01645
M9Y_RS01660	SM00436	Bacterial DNA topoisomeraes I ATP-binding domain
M9Y_RS01660	SM00437	Bacterial DNA topoisomerase I DNA-binding domain
M9Y_RS01660	SM00493	M9Y_RS01660
M9Y_RS01670	SM00244	prohibitin homologues
M9Y_RS01680	SM00732	Likely ribonuclease with RNase H fold.
M9Y_RS01755	SM00363	S4 RNA-binding domain
M9Y_RS01755	SM01390	M9Y_RS01755
M9Y_RS01790	SM01234	M9Y_RS01790
M9Y_RS01875	SM00382	ATPases associated with a variety of cellular activities
M9Y_RS01900	SM00919	Malic enzyme, NAD binding domain
M9Y_RS01900	SM01274	M9Y_RS01900
M9Y_RS01905	SM00222	Sec7 domain
M9Y_RS01965	SM00278	Helix-hairpin-helix DNA-binding motif class 1
M9Y_RS01970	SM00382	ATPases associated with a variety of cellular activities
M9Y_RS01975	SM00382	ATPases associated with a variety of cellular activities
M9Y_RS02120	SM00729	Elongator protein 3, MiaB family, Radical SAM
M9Y_RS02130	SM00873	B3/4 domain
M9Y_RS02130	SM00874	tRNA synthetase B5 domain
M9Y_RS02130	SM00896	Ferredoxin-fold anticodon binding domain
M9Y_RS02135	SM00480	DNA polymerase III beta subunit
M9Y_RS02150	SM00474	3'-5' exonuclease
M9Y_RS02170	SM00387	Histidine kinase-like ATPases
M9Y_RS02170	SM00388	His Kinase A (phosphoacceptor) domain
M9Y_RS02175	SM00448	cheY-homologous receiver domain
M9Y_RS02175	SM00862	Transcriptional regulatory protein, C terminal
M9Y_RS02185	SM01130	M9Y_RS02185
M9Y_RS02200	SM00881	CoA binding domain
M9Y_RS02210	SM00978	M9Y_RS02210
M9Y_RS02230	SM00493	M9Y_RS02230
M9Y_RS02245	SM00849	Metallo-beta-lactamase superfamily
M9Y_RS02290	SM00382	ATPases associated with a variety of cellular activities
M9Y_RS02290	SM00464	Found in ATP-dependent protease La (LON)
M9Y_RS02295	SM00869	Autotransporter beta-domain
M9Y_RS02350	SM00341	Helicase and RNase D C-terminal
M9Y_RS02350	SM00474	3'-5' exonuclease
M9Y_RS02365	SM00387	Histidine kinase-like ATPases
M9Y_RS02365	SM00388	His Kinase A (phosphoacceptor) domain
M9Y_RS02385	SM00563	Phosphate acyltransferases
M9Y_RS02500	SM01007	Class II Aldolase and Adducin N-terminal domain
M9Y_RS02510	SM01230	M9Y_RS02510
M9Y_RS02520	SM00530	Helix-turn-helix XRE-family like proteins 
M9Y_RS02540	SM01387	M9Y_RS02540
M9Y_RS02545	SM00316	Ribosomal protein S1-like RNA-binding domain
M9Y_RS02545	SM00322	K homology RNA-binding domain
M9Y_RS02550	SM00116	Domain in cystathionine beta-synthase and other proteins.
M9Y_RS02565	SM00382	ATPases associated with a variety of cellular activities
M9Y_RS02630	SM00316	Ribosomal protein S1-like RNA-binding domain
M9Y_RS02645	SM00411	bacterial (prokaryotic) histone like domain
M9Y_RS02655	SM00357	Cold shock protein domain
M9Y_RS02655	SM00382	ATPases associated with a variety of cellular activities
M9Y_RS02655	SM00959	Rho termination factor, N-terminal domain
M9Y_RS02670	SM00937	M9Y_RS02670
M9Y_RS02725	SM01004	Delta-aminolevulinic acid dehydratase
M9Y_RS02730	SM00487	DEAD-like helicases superfamily
M9Y_RS02730	SM00490	helicase superfamily c-terminal domain
M9Y_RS02750	SM00363	S4 RNA-binding domain
M9Y_RS02760	SM00382	ATPases associated with a variety of cellular activities
M9Y_RS02790	SM00316	Ribosomal protein S1-like RNA-binding domain
M9Y_RS02790	SM00322	K homology RNA-binding domain
M9Y_RS02800	SM00363	S4 RNA-binding domain
M9Y_RS02815	SM01359	M9Y_RS02815
M9Y_RS02815	SM01360	M9Y_RS02815
M9Y_RS02840	SM00382	ATPases associated with a variety of cellular activities
M9Y_RS02840	SM00448	cheY-homologous receiver domain
M9Y_RS02895	SM00278	Helix-hairpin-helix DNA-binding motif class 1
M9Y_RS02895	SM00465	GIY-YIG type nucleases (URI domain)
M9Y_RS02915	SM00957	SecA DEAD-like domain
M9Y_RS02915	SM00958	SecA preprotein cross-linking domain
M9Y_RS02930	SM01409	M9Y_RS02930
M9Y_RS02940	SM00387	Histidine kinase-like ATPases
M9Y_RS02940	SM00433	TopoisomeraseII
M9Y_RS02955	SM00924	MgtE intracellular N domain
M9Y_RS02965	SM01323	M9Y_RS02965
M9Y_RS03005	SM00487	DEAD-like helicases superfamily
M9Y_RS03005	SM00490	helicase superfamily c-terminal domain
M9Y_RS03025	SM00487	DEAD-like helicases superfamily
M9Y_RS03025	SM00490	helicase superfamily c-terminal domain
M9Y_RS03025	SM00982	M9Y_RS03025
M9Y_RS03025	SM01058	CarD-like/TRCF domain
M9Y_RS03035	SM00450	Rhodanese Homology Domain
M9Y_RS03040	SM00382	ATPases associated with a variety of cellular activities
M9Y_RS03040	SM00760	Bacterial dnaA protein helix-turn-helix domain
M9Y_RS03105	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
M9Y_RS03105	SM00387	Histidine kinase-like ATPases
M9Y_RS03105	SM00388	His Kinase A (phosphoacceptor) domain
M9Y_RS03125	SM00878	Biotin carboxylase C-terminal domain
M9Y_RS03135	SM00563	Phosphate acyltransferases
M9Y_RS03160	SM00954	Region found in RelA / SpoT proteins
M9Y_RS03170	SM00883	Chaperonin 10 Kd subunit
M9Y_RS03210	SM00662	RNA polymerases D
M9Y_RS03275	SM00739	KOW (Kyprides, Ouzounis, Woese) motif.
M9Y_RS03280	SM01374	M9Y_RS03280
M9Y_RS03300	SM00322	K homology RNA-binding domain
M9Y_RS03315	SM01382	M9Y_RS03315
M9Y_RS03315	SM01383	M9Y_RS03315
M9Y_RS03335	SM01403	M9Y_RS03335
M9Y_RS03355	SM00967	RNA 2'-O ribose methyltransferase substrate binding
M9Y_RS03365	SM00864	Tubulin/FtsZ family, GTPase domain
M9Y_RS03365	SM00865	Tubulin/FtsZ family, C-terminal domain
M9Y_RS03370	SM00932	Scaffold protein Nfu/NifU N terminal
M9Y_RS03380	SM00487	DEAD-like helicases superfamily
M9Y_RS03380	SM00490	helicase superfamily c-terminal domain
M9Y_RS03385	SM00357	Cold shock protein domain
M9Y_RS03400	SM00650	Ribosomal RNA adenine dimethylases
M9Y_RS03495	SM00382	ATPases associated with a variety of cellular activities
M9Y_RS03495	SM00994	ClpX C4-type zinc finger
M9Y_RS03495	SM01086	C-terminal, D2-small domain, of ClpB protein
M9Y_RS03515	SM00382	ATPases associated with a variety of cellular activities
M9Y_RS03535	SM00382	ATPases associated with a variety of cellular activities
M9Y_RS03545	SM00116	Domain in cystathionine beta-synthase and other proteins.
M9Y_RS03545	SM01091	Transporter associated domain
M9Y_RS03555	SM00869	Autotransporter beta-domain
M9Y_RS03570	SM00411	bacterial (prokaryotic) histone like domain
M9Y_RS03600	SM00857	Resolvase, N terminal domain
M9Y_RS03615	SM00248	ankyrin repeats
M9Y_RS03655	SM00292	breast cancer carboxy-terminal domain
M9Y_RS03655	SM00532	Ligase N family
M9Y_RS03705	SM00479	M9Y_RS03705
M9Y_RS03720	SM00827	Acyl transferase domain in polyketide synthase (PKS) enzymes.
M9Y_RS03745	SM01091	Transporter associated domain
M9Y_RS03755	SM00729	Elongator protein 3, MiaB family, Radical SAM
M9Y_RS03775	SM00478	endonuclease III
M9Y_RS03775	SM00525	M9Y_RS03775
M9Y_RS03820	SM00530	Helix-turn-helix XRE-family like proteins 
M9Y_RS03860	SM00382	ATPases associated with a variety of cellular activities
M9Y_RS03865	SM00822	M9Y_RS03865
M9Y_RS03875	SM00825	Beta-ketoacyl synthase
M9Y_RS03880	SM00072	Guanylate kinase homologues.
M9Y_RS03885	SM00530	Helix-turn-helix XRE-family like proteins 
M9Y_RS03930	SM00382	ATPases associated with a variety of cellular activities
M9Y_RS03930	SM00962	SRP54-type protein, GTPase domain
M9Y_RS03930	SM00963	SRP54-type protein, helical bundle domain
M9Y_RS03935	SM00279	Helix-hairpin-helix class 2 (Pol1 family) motifs
M9Y_RS03935	SM00475	5'-3' exonuclease
M9Y_RS03935	SM00482	DNA polymerase A domain
M9Y_RS03945	SM00481	DNA polymerase alpha chain like domain
M9Y_RS03950	SM00984	UDP binding domain
M9Y_RS04020	SM00382	ATPases associated with a variety of cellular activities
M9Y_RS04035	SM00929	NADH-ubiquinone oxidoreductase-G iron-sulfur binding region
M9Y_RS04055	SM00382	ATPases associated with a variety of cellular activities
M9Y_RS04090	SM00729	Elongator protein 3, MiaB family, Radical SAM
M9Y_RS04095	SM00287	Bacterial SH3 domain homologues
M9Y_RS04145	SM00155	Phospholipase D. Active site motifs.
M9Y_RS04165	SM00382	ATPases associated with a variety of cellular activities
M9Y_RS04165	SM00843	M9Y_RS04165
M9Y_RS04230	SM00382	ATPases associated with a variety of cellular activities
M9Y_RS04255	SM01152	M9Y_RS04255
M9Y_RS04260	SM00387	Histidine kinase-like ATPases
M9Y_RS04285	SM00986	Uracil DNA glycosylase superfamily
M9Y_RS04285	SM00987	UreE urease accessory protein, C-terminal domain 
M9Y_RS04290	SM00363	S4 RNA-binding domain
M9Y_RS04305	SM00836	DALR anticodon binding domain
M9Y_RS04340	SM00863	Threonyl and Alanyl tRNA synthetase second additional domain
M9Y_RS04355	SM00400	zinc finger
M9Y_RS04355	SM00493	M9Y_RS04355
M9Y_RS04375	SM01002	Alanine dehydrogenase/PNT, C-terminal domain
M9Y_RS04375	SM01003	Alanine dehydrogenase/PNT, N-terminal domain
M9Y_RS04385	SM00382	ATPases associated with a variety of cellular activities
M9Y_RS04400	SM00382	ATPases associated with a variety of cellular activities
M9Y_RS04405	SM00849	Metallo-beta-lactamase superfamily
M9Y_RS04410	SM00014	Acid phosphatase homologues
M9Y_RS04460	SM00853	MutL C terminal dimerisation domain
M9Y_RS04460	SM01340	M9Y_RS04460
