ASQ44_RS00060 SM00382 ATPases associated with a variety of cellular activities ASQ44_RS00060 SM01086 C-terminal, D2-small domain, of ClpB protein ASQ44_RS00095 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain ASQ44_RS00165 SM00382 ATPases associated with a variety of cellular activities ASQ44_RS00240 SM00869 Autotransporter beta-domain ASQ44_RS00330 SM01058 CarD-like/TRCF domain ASQ44_RS00425 SM00400 zinc finger ASQ44_RS00425 SM00493 ASQ44_RS00425 ASQ44_RS00445 SM01002 Alanine dehydrogenase/PNT, C-terminal domain ASQ44_RS00445 SM01003 Alanine dehydrogenase/PNT, N-terminal domain ASQ44_RS00485 SM00382 ATPases associated with a variety of cellular activities ASQ44_RS00490 SM00849 Metallo-beta-lactamase superfamily ASQ44_RS00495 SM00014 Acid phosphatase homologues ASQ44_RS00565 SM00644 ASQ44_RS00565 ASQ44_RS00585 SM00853 MutL C terminal dimerisation domain ASQ44_RS00585 SM01340 ASQ44_RS00585 ASQ44_RS00665 SM00363 S4 RNA-binding domain ASQ44_RS00670 SM00986 Uracil DNA glycosylase superfamily ASQ44_RS00670 SM00987 UreE urease accessory protein, C-terminal domain ASQ44_RS00710 SM00387 Histidine kinase-like ATPases ASQ44_RS00715 SM01152 ASQ44_RS00715 ASQ44_RS00785 SM00382 ATPases associated with a variety of cellular activities ASQ44_RS00860 SM00382 ATPases associated with a variety of cellular activities ASQ44_RS00860 SM00843 ASQ44_RS00860 ASQ44_RS00865 SM00869 Autotransporter beta-domain ASQ44_RS00890 SM00155 Phospholipase D. Active site motifs. ASQ44_RS01005 SM00287 Bacterial SH3 domain homologues ASQ44_RS01025 SM00729 Elongator protein 3, MiaB family, Radical SAM ASQ44_RS01085 SM00382 ATPases associated with a variety of cellular activities ASQ44_RS01105 SM00929 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region ASQ44_RS01220 SM00382 ATPases associated with a variety of cellular activities ASQ44_RS01225 SM00822 ASQ44_RS01225 ASQ44_RS01235 SM00825 Beta-ketoacyl synthase ASQ44_RS01240 SM00382 ATPases associated with a variety of cellular activities ASQ44_RS01260 SM00072 Guanylate kinase homologues. ASQ44_RS01305 SM00382 ATPases associated with a variety of cellular activities ASQ44_RS01305 SM00962 SRP54-type protein, GTPase domain ASQ44_RS01305 SM00963 SRP54-type protein, helical bundle domain ASQ44_RS01310 SM00279 Helix-hairpin-helix class 2 (Pol1 family) motifs ASQ44_RS01310 SM00475 5'-3' exonuclease ASQ44_RS01310 SM00482 DNA polymerase A domain ASQ44_RS01335 SM00481 DNA polymerase alpha chain like domain ASQ44_RS01340 SM00984 UDP binding domain ASQ44_RS01400 SM00530 Helix-turn-helix XRE-family like proteins ASQ44_RS01430 SM00382 ATPases associated with a variety of cellular activities ASQ44_RS01440 SM00530 Helix-turn-helix XRE-family like proteins ASQ44_RS01505 SM00478 endonuclease III ASQ44_RS01505 SM00525 ASQ44_RS01505 ASQ44_RS01525 SM00729 Elongator protein 3, MiaB family, Radical SAM ASQ44_RS01535 SM01091 Transporter associated domain ASQ44_RS01660 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. ASQ44_RS01685 SM00479 ASQ44_RS01685 ASQ44_RS01755 SM00292 breast cancer carboxy-terminal domain ASQ44_RS01755 SM00532 Ligase N family ASQ44_RS01785 SM00411 bacterial (prokaryotic) histone like domain ASQ44_RS01800 SM00954 Region found in RelA / SpoT proteins ASQ44_RS01805 SM00869 Autotransporter beta-domain ASQ44_RS01830 SM00116 Domain in cystathionine beta-synthase and other proteins. ASQ44_RS01830 SM01091 Transporter associated domain ASQ44_RS01840 SM00382 ATPases associated with a variety of cellular activities ASQ44_RS01860 SM00382 ATPases associated with a variety of cellular activities ASQ44_RS01885 SM00382 ATPases associated with a variety of cellular activities ASQ44_RS01885 SM00994 ClpX C4-type zinc finger ASQ44_RS01885 SM01086 C-terminal, D2-small domain, of ClpB protein ASQ44_RS01995 SM00898 Formamidopyrimidine-DNA glycosylase N-terminal domain ASQ44_RS01995 SM01232 ASQ44_RS01995 ASQ44_RS02030 SM00382 ATPases associated with a variety of cellular activities ASQ44_RS02080 SM00650 Ribosomal RNA adenine dimethylases ASQ44_RS02090 SM00357 Cold shock protein domain ASQ44_RS02095 SM00487 DEAD-like helicases superfamily ASQ44_RS02095 SM00490 helicase superfamily c-terminal domain ASQ44_RS02105 SM00932 Scaffold protein Nfu/NifU N terminal ASQ44_RS02125 SM00864 Tubulin/FtsZ family, GTPase domain ASQ44_RS02125 SM00865 Tubulin/FtsZ family, C-terminal domain ASQ44_RS02150 SM00967 RNA 2'-O ribose methyltransferase substrate binding ASQ44_RS02170 SM01403 ASQ44_RS02170 ASQ44_RS02190 SM01382 ASQ44_RS02190 ASQ44_RS02190 SM01383 ASQ44_RS02190 ASQ44_RS02205 SM00322 K homology RNA-binding domain ASQ44_RS02225 SM01374 ASQ44_RS02225 ASQ44_RS02230 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. ASQ44_RS02290 SM00662 RNA polymerases D ASQ44_RS02370 SM00883 Chaperonin 10 Kd subunit ASQ44_RS02380 SM00954 Region found in RelA / SpoT proteins ASQ44_RS02420 SM00563 Phosphate acyltransferases ASQ44_RS02435 SM00878 Biotin carboxylase C-terminal domain ASQ44_RS02475 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain ASQ44_RS02475 SM00387 Histidine kinase-like ATPases ASQ44_RS02475 SM00388 His Kinase A (phosphoacceptor) domain ASQ44_RS02635 SM00382 ATPases associated with a variety of cellular activities ASQ44_RS02635 SM00760 Bacterial dnaA protein helix-turn-helix domain ASQ44_RS02640 SM00450 Rhodanese Homology Domain ASQ44_RS02650 SM00487 DEAD-like helicases superfamily ASQ44_RS02650 SM00490 helicase superfamily c-terminal domain ASQ44_RS02650 SM00982 ASQ44_RS02650 ASQ44_RS02650 SM01058 CarD-like/TRCF domain ASQ44_RS02710 SM00487 DEAD-like helicases superfamily ASQ44_RS02710 SM00490 helicase superfamily c-terminal domain ASQ44_RS02750 SM01323 ASQ44_RS02750 ASQ44_RS02775 SM00924 MgtE intracellular N domain ASQ44_RS02790 SM00387 Histidine kinase-like ATPases ASQ44_RS02790 SM00433 TopoisomeraseII ASQ44_RS02800 SM01409 ASQ44_RS02800 ASQ44_RS02815 SM00957 SecA DEAD-like domain ASQ44_RS02815 SM00958 SecA preprotein cross-linking domain ASQ44_RS02820 SM00748 Higher Eukarytoes and Prokaryotes Nucleotide-binding domain ASQ44_RS02875 SM00278 Helix-hairpin-helix DNA-binding motif class 1 ASQ44_RS02875 SM00465 GIY-YIG type nucleases (URI domain) ASQ44_RS02935 SM00382 ATPases associated with a variety of cellular activities ASQ44_RS02935 SM00448 cheY-homologous receiver domain ASQ44_RS03060 SM00363 S4 RNA-binding domain ASQ44_RS03085 SM00316 Ribosomal protein S1-like RNA-binding domain ASQ44_RS03085 SM00322 K homology RNA-binding domain ASQ44_RS03120 SM00382 ATPases associated with a variety of cellular activities ASQ44_RS03135 SM00363 S4 RNA-binding domain ASQ44_RS03160 SM00487 DEAD-like helicases superfamily ASQ44_RS03160 SM00490 helicase superfamily c-terminal domain ASQ44_RS03170 SM01004 Delta-aminolevulinic acid dehydratase ASQ44_RS03380 SM00563 Phosphate acyltransferases ASQ44_RS03425 SM00388 His Kinase A (phosphoacceptor) domain ASQ44_RS03460 SM00341 Helicase and RNase D C-terminal ASQ44_RS03460 SM00474 3'-5' exonuclease ASQ44_RS03505 SM01126 ASQ44_RS03505 ASQ44_RS03620 SM00957 SecA DEAD-like domain ASQ44_RS03625 SM00028 Tetratricopeptide repeats ASQ44_RS03720 SM00028 Tetratricopeptide repeats ASQ44_RS03745 SM01321 ASQ44_RS03745 ASQ44_RS03755 SM01321 ASQ44_RS03755 ASQ44_RS03765 SM00507 HNH nucleases ASQ44_RS03800 SM00387 Histidine kinase-like ATPases ASQ44_RS03825 SM00316 Ribosomal protein S1-like RNA-binding domain ASQ44_RS03855 SM00387 Histidine kinase-like ATPases ASQ44_RS03855 SM00388 His Kinase A (phosphoacceptor) domain ASQ44_RS03865 SM00421 helix_turn_helix, Lux Regulon ASQ44_RS03870 SM00954 Region found in RelA / SpoT proteins ASQ44_RS03935 SM00028 Tetratricopeptide repeats ASQ44_RS04015 SM00368 Leucine rich repeat, ribonuclease inhibitor type ASQ44_RS04040 SM00411 bacterial (prokaryotic) histone like domain ASQ44_RS04050 SM00357 Cold shock protein domain ASQ44_RS04050 SM00382 ATPases associated with a variety of cellular activities ASQ44_RS04050 SM00959 Rho termination factor, N-terminal domain ASQ44_RS04065 SM00937 ASQ44_RS04065 ASQ44_RS04180 SM01007 Class II Aldolase and Adducin N-terminal domain ASQ44_RS04205 SM01230 ASQ44_RS04205 ASQ44_RS04215 SM00530 Helix-turn-helix XRE-family like proteins ASQ44_RS04240 SM01387 ASQ44_RS04240 ASQ44_RS04245 SM00316 Ribosomal protein S1-like RNA-binding domain ASQ44_RS04245 SM00322 K homology RNA-binding domain ASQ44_RS04250 SM00116 Domain in cystathionine beta-synthase and other proteins. ASQ44_RS04265 SM00382 ATPases associated with a variety of cellular activities ASQ44_RS04415 SM00382 ATPases associated with a variety of cellular activities ASQ44_RS04415 SM00464 Found in ATP-dependent protease La (LON) ASQ44_RS04480 SM00849 Metallo-beta-lactamase superfamily ASQ44_RS04505 SM00493 ASQ44_RS04505 ASQ44_RS04525 SM00978 ASQ44_RS04525 ASQ44_RS04535 SM00966 SpoVT / AbrB like domain ASQ44_RS04550 SM00881 CoA binding domain ASQ44_RS04565 SM01130 ASQ44_RS04565 ASQ44_RS04575 SM00448 cheY-homologous receiver domain ASQ44_RS04575 SM00862 Transcriptional regulatory protein, C terminal ASQ44_RS04580 SM00387 Histidine kinase-like ATPases ASQ44_RS04580 SM00388 His Kinase A (phosphoacceptor) domain ASQ44_RS04600 SM00474 3'-5' exonuclease ASQ44_RS04620 SM00480 DNA polymerase III beta subunit ASQ44_RS04625 SM00873 B3/4 domain ASQ44_RS04625 SM00874 tRNA synthetase B5 domain ASQ44_RS04625 SM00896 Ferredoxin-fold anticodon binding domain ASQ44_RS04635 SM00729 Elongator protein 3, MiaB family, Radical SAM ASQ44_RS04840 SM00382 ATPases associated with a variety of cellular activities ASQ44_RS04845 SM00382 ATPases associated with a variety of cellular activities ASQ44_RS04865 SM00278 Helix-hairpin-helix DNA-binding motif class 1 ASQ44_RS04985 SM00966 SpoVT / AbrB like domain ASQ44_RS05000 SM00919 Malic enzyme, NAD binding domain ASQ44_RS05000 SM01274 ASQ44_RS05000 ASQ44_RS05015 SM00248 ankyrin repeats ASQ44_RS05020 SM00248 ankyrin repeats ASQ44_RS05030 SM00382 ATPases associated with a variety of cellular activities ASQ44_RS05045 SM00644 ASQ44_RS05045 ASQ44_RS05130 SM01234 ASQ44_RS05130 ASQ44_RS05195 SM00363 S4 RNA-binding domain ASQ44_RS05195 SM01390 ASQ44_RS05195 ASQ44_RS05265 SM00530 Helix-turn-helix XRE-family like proteins ASQ44_RS05270 SM00732 Likely ribonuclease with RNase H fold. ASQ44_RS05285 SM00244 prohibitin homologues ASQ44_RS05305 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain ASQ44_RS05305 SM00437 Bacterial DNA topoisomerase I DNA-binding domain ASQ44_RS05305 SM00493 ASQ44_RS05305 ASQ44_RS05335 SM01219 ASQ44_RS05335 ASQ44_RS05375 SM00382 ATPases associated with a variety of cellular activities ASQ44_RS05375 SM01086 C-terminal, D2-small domain, of ClpB protein ASQ44_RS05395 SM00859 Semialdehyde dehydrogenase, NAD binding domain ASQ44_RS05400 SM00382 ATPases associated with a variety of cellular activities ASQ44_RS05525 SM00533 DNA-binding domain of DNA mismatch repair MUTS family ASQ44_RS05525 SM00534 ATPase domain of DNA mismatch repair MUTS family ASQ44_RS05695 SM00028 Tetratricopeptide repeats ASQ44_RS05705 SM00838 Elongation factor G C-terminus ASQ44_RS05710 SM00937 ASQ44_RS05710 ASQ44_RS05780 SM01329 ASQ44_RS05780 ASQ44_RS05785 SM00935 Outer membrane protein (OmpH-like) ASQ44_RS05805 SM00861 Transketolase, pyrimidine binding domain ASQ44_RS05825 SM00363 S4 RNA-binding domain ASQ44_RS05835 SM00316 Ribosomal protein S1-like RNA-binding domain ASQ44_RS05865 SM00842 Cell division protein FtsA ASQ44_RS05890 SM00052 Putative diguanylate phosphodiesterase ASQ44_RS05945 SM00841 Elongation factor P, C-terminal ASQ44_RS05945 SM01185 ASQ44_RS05945 ASQ44_RS05950 SM00267 diguanylate cyclase ASQ44_RS05950 SM00448 cheY-homologous receiver domain ASQ44_RS06000 SM00564 beta-propeller repeat ASQ44_RS06015 SM00387 Histidine kinase-like ATPases ASQ44_RS06015 SM00388 His Kinase A (phosphoacceptor) domain ASQ44_RS06020 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. ASQ44_RS06020 SM00245 tail specific protease ASQ44_RS06025 SM00387 Histidine kinase-like ATPases ASQ44_RS06025 SM00433 TopoisomeraseII ASQ44_RS06075 SM00382 ATPases associated with a variety of cellular activities ASQ44_RS06100 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain ASQ44_RS06150 SM00382 ATPases associated with a variety of cellular activities ASQ44_RS06245 SM00434 DNA Topoisomerase IV ASQ44_RS06265 SM00487 DEAD-like helicases superfamily ASQ44_RS06265 SM00490 helicase superfamily c-terminal domain ASQ44_RS06275 SM00271 DnaJ molecular chaperone homology domain ASQ44_RS06425 SM00271 DnaJ molecular chaperone homology domain ASQ44_RS06450 SM00861 Transketolase, pyrimidine binding domain ASQ44_RS06495 SM00729 Elongator protein 3, MiaB family, Radical SAM ASQ44_RS06510 SM00382 ATPases associated with a variety of cellular activities ASQ44_RS06510 SM00962 SRP54-type protein, GTPase domain ASQ44_RS06510 SM00963 SRP54-type protein, helical bundle domain ASQ44_RS06520 SM00411 bacterial (prokaryotic) histone like domain ASQ44_RS06570 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. ASQ44_RS06635 SM00845 GatB domain ASQ44_RS06640 SM00062 Bacterial periplasmic substrate-binding proteins ASQ44_RS06640 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. ASQ44_RS06645 SM00903 Flavin reductase like domain ASQ44_RS06690 SM00663 RNA polymerase I subunit A N-terminus ASQ44_RS06715 SM00649 Ribosomal protein L11/L12 ASQ44_RS06720 SM00738 In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold. ASQ44_RS06720 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. ASQ44_RS06735 SM00838 Elongation factor G C-terminus ASQ44_RS06735 SM00889 Elongation factor G, domain IV ASQ44_RS06770 SM00450 Rhodanese Homology Domain ASQ44_RS06775 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. ASQ44_RS06780 SM00244 prohibitin homologues ASQ44_RS06785 SM00244 prohibitin homologues ASQ44_RS06825 SM00358 Double-stranded RNA binding motif ASQ44_RS06825 SM00535 Ribonuclease III family ASQ44_RS06835 SM00928 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region ASQ44_RS06905 SM00382 ATPases associated with a variety of cellular activities ASQ44_RS06975 SM00382 ATPases associated with a variety of cellular activities ASQ44_RS06985 SM01005 Alanine racemase, C-terminal domain ASQ44_RS07060 SM00840 ASQ44_RS07060 ASQ44_RS07065 SM00869 Autotransporter beta-domain ASQ44_RS07125 SM00448 cheY-homologous receiver domain ASQ44_RS07125 SM00862 Transcriptional regulatory protein, C terminal ASQ44_RS07150 SM00434 DNA Topoisomerase IV ASQ44_RS07160 SM00836 DALR anticodon binding domain ASQ44_RS07160 SM01016 Arginyl tRNA synthetase N terminal dom ASQ44_RS07165 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. ASQ44_RS07210 SM00382 ATPases associated with a variety of cellular activities ASQ44_RS07215 SM00470 ParB-like nuclease domain ASQ44_RS07230 SM01228 ASQ44_RS07230 ASQ44_RS07235 SM00562 ASQ44_RS07235 ASQ44_RS07315 SM00382 ATPases associated with a variety of cellular activities