NDY49_RS00015 NONE
NDY49_RS00020 NONE
NDY49_RS00025    6068 ..    6081 +  -6.7  -2.94352   TCTTCTAGTTGTTCA               GGTGA TAAT TCACC                AATTTTTTTGAATTT  61 60
NDY49_RS00050    9962 ..    9974 +  -3.4  -2.95388   GTGGATACTACTAAT                GTTG TGGAT CAAC                TATATGCATTAGCTG  44 1
NDY49_RS00055   10219 ..   10242 +  -2.4  -4.06825   TTGTATTATAACAAC          GCGAGTGG ATAACCCG CTATTCGC           TTTAATCTTGTTTTA  52 49
        dusB NONE
NDY49_RS00085 NONE
NDY49_RS00090   15089 ..   15108 +  -5.8  -4.21885   AAAAAATCAATAAGG            GAAGATTC TTGT GAATTTTC             TTTATGATTTGTTAT  69 124
NDY49_RS00120   25759 ..   25795 +  -7.4  -2.51814   ATAAAACTTCTAACT   TAATGTCATGCCGTGGT CATA GCCACGGTATGAC-TAA    CTATATTGCTTACTT  62 74
NDY49_RS00125 NONE
NDY49_RS00130   26765 ..   26785 +  -2.6  -3.47078   CCCTTAGGGAACATT            TGAACTTT CTTAC AAAGGTCA            TTATCGTATAAAATA  46 360
NDY49_RS00135 NONE
NDY49_RS00140   28033 ..   28056 +  -2.4  -3.39289   TCCAATATTAACAGG          TGTTCCAAGT GAAG ACTGGGAAAA           TTCTAAAATATTTTA  45 90
NDY49_RS00145   28694 ..   28706 +  -6.3  -3.13164   ATTTTTAGCAATGTT                GCTTT CTG AAAGC                TTAACTGATTGAAAA  59 428
NDY49_RS00165   30182 ..   30194 +  -3.3  -2.65404   TAAATCATTAATGAC                ACGGT AAA ACCGG                CTATTACTTTTAATA  43 162
NDY49_RS00185   32688 ..   32699 +  -4.4  -3.93695   TCAACTTGAAAAATT                GACT GTGT AGTC                 TTTGTAAATCCTCGG  57 51
NDY49_RS00200   34884 ..   34894 +    -4  -5.66684   TTTCAAAAATTTGCT                 GTAT TTA ATAC                 TTTTTTTCTGGATTC  88 64
NDY49_RS00260   43391 ..   43413 +    -5  -4.27259   GGGGTTGTTATTTCG           TCATTTTTTA TTT TAAAAAACGA           TTTTAAATCTATATG  64 415
NDY49_RS00270   44326 ..   44352 +  -2.2  -3.79906   AATAGGATGTTATTT         TGACGTCATTGC GAG GAAATTACGACA         TTATTGTGCGGATCG  49 36
NDY49_RS00275 NONE
NDY49_RS00280 NONE
NDY49_RS00285   46151 ..   46178 +  -9.2  -2.80113   GATACCAAATCGTCA        TTGCGA-GCAGCC GTA GGCTGCGTGGCAA        TCTCATGAAATAATA  74 60
NDY49_RS00305   49233 ..   49248 +  -4.8  -3.31931   GAGTTATTTGACTGA              GAATTT CCTG AAATTC               TTCCTCATTCTCTGG  53 445
        clpB   55403 ..   55422 +    -3  -3.34715   TATTTTATCGACTAA            TTTTTTAT CTTT ATAAAAAG             TATTTACGGCCCCTA  48 487
        rpsF   59501 ..   59511 +  -2.6  -2.93447   TAATTGACGTAACGA                 TTAA TAA TTAA                 ATTTGTAAGAATTAA  42 15
        rpsR NONE
        rplI   60332 ..   60351 +  -4.4  -6.00086   TGAAACTTCAGAAGA            TTTA-GCTG AGT CAGCATAAA            TTTTTTTTATCATCT  91 7
        tilS   62108 ..   62147 + -12.6  -2.50252   GGTATTTAAGAGGTT  ATCTGTAAATAAATTTTA ACTA TAAAATTTATTTACAGAC   CTCTCTTATACCAAT 100 45
        ftsH   64124 ..   64134 +  -2.6  -4.51378   AGTATAATTTACGTA                 TAAA TGA TTTA                 TTTTGTGGTATCGGT  58 48
NDY49_RS00400   65687 ..   65699 +  -4.1  -3.86634   TTTAATTGCAGAACG                TCACG GTG TGTGA                TTCTTAATTAATTAT  55 13
NDY49_RS00415   69700 ..   69733 + -11.9  -3.19038   AATAAATTAAATTTG     TATCCAAGATGGAAG TTGT CTTTCAGCTTGGATA      TTCACTACTTTTGAA  93 79
        yidC NONE
        pgsA NONE
NDY49_RS00430   72660 ..   72673 +  -5.3  -3.33696   AAGCGGAGTTGTTGT               GGATA GGTT TATCC                TTCATTGCGAGGACA  56 42
NDY49_RS00445   73729 ..   73740 +    -3  -4.10429   ACTGCACTCCACTTT                TCAA GATA TTGA                 TTTTAAGGAGTCGTT  55 67
NDY49_RS00450   74487 ..   74497 +    -4  -3.20164   CTAAAACAGAACTTG                 CATA TTA TATG                 TTAACTTGGATATGA  49 0
NDY49_RS00455   74946 ..   74964 +  -7.4  -4.07568   AATTTTCTTGAATCT             TGCTACCG GTC CTGTAGCA             TTTTCAACAGAAAAG  76 308
        tlc1   77195 ..   77236 +  -7.7  -3.85698   CTTTTTTGCTACAAA TTATAAGATTTTTGTGA AAAATGAA TGACAAAAATCTTATAA  TTTGTAGCAAAAAAG  74 121
NDY49_RS00470 NONE
         ndk   79061 ..   79071 +  -2.6  -3.21925   TTAATAAATCTGAAA                 TTAT AGA ATAA                 TTAATGCTAAAATAT  45 15
        mnmG NONE
        rsmG NONE
NDY49_RS00490 NONE
NDY49_RS00495   83268 ..   83280 +  -3.5  -2.82516   AGAAATTACAATGTC                TAATT TTG AATTA                TATGATCATAGAGCA  45 180
        ettA NONE
NDY49_RS00505 NONE
        kdsA   86342 ..   86368 +    -9  -3.44936   TCTTTGTTGTAAATT         TACTATTTAGAA TTT TTTTAAATAGTA         TTAATATTGATTTAT  76 173
NDY49_RS00515   87337 ..   87359 +  -2.6  -2.56715   TATAATGATCCTTTG           GGCAGATCGT TAA ATGATCATCC           TGACTTAGTAAAACT  40 136
NDY49_RS00520   87765 ..   87803 + -14.1  -3.41051   TTAAAAGTTTGACGT  TGC-GATGTCATTGCTGC TGTT GCAGGAATGACATCGGCA   TTCTAATAACAATGC 100 50
NDY49_RS00530   89558 ..   89572 +    -7  -3.65656   GGGTAATTTGTGCGT               CGCTGC GGT GCTGCG               TTCTGTGTCTCCTAC  67 41
        argS   91443 ..   91470 +  -5.6  -2.80113   GATACCGAGTCGTCA        TTGTGA-GCAGCC GTA GGCTGCGTGGCAA        TCTCATGAAATAATA  55 82
NDY49_RS00540   92328 ..   92338 +  -2.4  -4.08216   GTTTATACTTTTTTT                 CTGG ATT CCTG                 TTTTCGCAGGAATGA  52 120
        parC   94839 ..   94873 +  -9.5  -2.64155   TCTTTAAATAATAAT     TTAGAAGCGGTTGCA TATCT TGTAACTGCTTTTAA     TCCATTTACAAAGGA  73 247
         dcd NONE
        secB NONE
NDY49_RS00565   98910 ..   98922 +  -3.4  -3.09274   ATTTTAGCACAAGGA                GCAT AATTA ATGC                CTTTATCTACTTCTT  45 20
        queF   99845 ..   99872 +  -3.6  -5.47218   GACCACGGAATCTAG        CTTAAAATACTA TTAA TAGTATTTTAGA         TTTTTTTGGATCCCG  76 130
NDY49_RS00590 NONE
NDY49_RS00595 NONE
NDY49_RS00600 NONE
NDY49_RS00605 NONE
NDY49_RS00610  105958 ..  105970 +  -4.9  -4.09187   CTAGTTTCTGTCAGA                TACTA TTA TAGTA                TTATGTTTATTTTAT  62 104
        secG  106804 ..  106825 +  -4.5  -2.85699   GGAGCAATTTTTTAC           CCGTTAA CTTTTTTA TTAACGG            ATTTAATAGCTGAGT  50 468
        cysS  114437 ..  114451 +  -8.6  -3.06265   TAAAAGCTTGTAAAT               TACGCA ATA TGCGTA               TATAATTTATGGGCT  73 38
        rpsB  115613 ..  115649 + -11.3  -4.52873   ATCCCGGGATCCAGC    TTAAAAATACTAATATT ATT AATATTAGTATTTTAAA    TTGTTTTTATAGACC 100 86
         tsf  116978 ..  117009 +  -8.2  -3.60538   CAAAGCAAACAAAGG      CGAATTTAGGATAA GTGC TTATTCTAAACTCG       TATTTATAATACTTT  74 323
NDY49_RS00645  117922 ..  117932 +  -6.8  -5.03314   GCAAACATGCCTAAA                 GCAG ATC CTGC                 TTTTTTAAAGATACA  83 404
NDY49_RS00675 NONE
NDY49_RS00680 NONE
NDY49_RS00685 NONE
NDY49_RS00690 NONE
NDY49_RS00695 NONE
NDY49_RS00700 NONE
NDY49_RS00705 NONE
NDY49_RS00710 NONE
NDY49_RS00715  127873 ..  127883 +    -4   -3.0693   GAATTATTTTTTAAA                 GTAT AGT ATAC                 TCGTTTAATTTGAAA  49 20
NDY49_RS00720 NONE
NDY49_RS00725  129374 ..  129385 +  -4.4  -5.08483   GTGAATTAATATTTC                TAGC TAAT GCTA                 TTTTATTTAATTTTA  72 364
        rpmB NONE
        rpmE  132105 ..  132119 +  -4.2  -3.45571   TTTCTGGCTTGCCGT               GCAGTC TAC GACTAC               TTGGTATTTACACAA  52 143
NDY49_RS00760 NONE
        yihA NONE
NDY49_RS00770 NONE
NDY49_RS00775  134204 ..  134218 +  -4.2  -3.06696   ATTTAATATCATACC               GCGC CTTGATC GCGC               TATCTTAGGGCACAG  49 79
NDY49_RS00780  136841 ..  136871 +  -9.7  -4.62069   TCACAGACTGTATTC       TGAGATCCCGTGG ACAAG CCACGGGATGACA       TTTTTAAAATGCGAG 100 83
NDY49_RS00785 NONE
NDY49_RS00790 NONE
NDY49_RS00795  144870 ..  144883 +  -3.8  -3.07307   TTACTATTGAATACT               CACG GTATGG CGTG                TTGGATAACAATTTA  47 155
NDY49_RS00800 NONE
NDY49_RS00805  151535 ..  151561 +  -5.3  -3.77196   TATTTGATAAAATAA         GCATATAAAAA ACAAG TTTTTTTATGC         TTTACTGGATGCTCG  61 367
        trmD NONE
        rplS  155713 ..  155740 +  -9.2  -2.80113   ATACTCAATACGTCA        TTGCAA-GCAGCC GTA GGCTGCATGGCAA        TCTCATGAAATAATA  74 93
        secF NONE
        nuoF  158609 ..  158619 +    -4  -3.91911   AGATTGCTTCGTCAA                 TTAC TTT GTAA                 TTTCCTTGCAATGAC  57 154
        lepB NONE
         rnc NONE
         era  161175 ..  161185 +  -3.2  -4.23647   AGCTGTCACTCTGTG                 GCTT GAC AGGC                 TTTGTTGGATCGTTT  57 41
        ruvC NONE
NDY49_RS00865  162638 ..  162650 +  -3.5  -3.68435   GTGAAGAAATGTGCC                TTTTT GAG AAAAA                TATTCTTTTAAAAAC  50 219
        hflK  166209 ..  166248 + -11.7  -3.91908   ATTAAACCATAGGGG TGC-T-ATGTCATTCCCGC AAAA GCGGGAATGACATCAAGCG  TGTTTTTCACGCTAT 100 29
        hflC NONE
NDY49_RS00900  168785 ..  168809 +  -8.8  -4.30978   ATTTAATAAAATAAA          GCTATAAAAA TAAGT TTTTTATAGC          TTTTGCTGGATTCCC  84 91
NDY49_RS00905  169727 ..  169737 +  -2.4  -4.08216   TGTATTTTTTAATTA                 CTGG ATT CCTG                 TTTTCGCGGGAATGA  52 136
        sdhC  170245 ..  170255 +  -5.4  -3.73775   AGATTGTTTCGTCAA                 TTGC TAT GCAA                 TTTCCTCGCAATGAC  61 113
        sdhD  170665 ..  170681 +  -2.4  -2.64099   TTTGTAGTAGCGCTG              TTTTAT AAAGG ATAAAA              ATTGTCATACCGCGG  39 11
        sdhA NONE
NDY49_RS00925  173498 ..  173525 + -12.2  -2.70259   AGAAATGATTGGAAA        TAAAGGGTGGAA GTAT TTTCACCCTTTA         ATTATCGTATATATA 100 117
        rpsL NONE
        rpsG NONE
        fusA  176682 ..  176698 +  -3.1  -5.45652   TAATAACAAATATTT              TTAATAA CTT TTATTGA              TTTTTTATTAAAAAT  74 132
NDY49_RS00945  176815 ..  176831 +  -2.3  -4.60924   GGCTTAGAGCTTTTT              TGCTATA AAA TATAGAA              TTTTTACAAAATTTG  58 46
        secE NONE
        nusG  177926 ..  177940 +  -4.3  -4.94222   GAAATAATAAAAAAC               TTCTG ATTTA CAGAA               TTTTTCTGCCTTGTT  70 163
        rplK NONE
        rplA  179286 ..  179306 +    -7  -3.21276   TTTAAGCATTTGTAT            CAGTTTAA ATATA TTAAACTG            TATTATAAAAGGAGA  62 92
        rplJ NONE
        rplL  180698 ..  180720 +  -2.9  -5.44119   TGGATTTTAAGAAGT           TAATTTAAA GCTAA TTTAAGTTA           TTTTTTTGCAATAGG  72 309
        rpoB  185502 ..  185527 +  -4.9  -4.30978   GACAGGTCATTTAAA         CAAATAAAAAA CTTA TTTTTTATCTG          TTTTACTAGATTCCC  64 45
        rpoC  190197 ..  190225 + -11.9  -4.34263   TTATTGACAAAAAAA        GCCTATAAAAACC CAA GTTTTTTATAGGC        TTTATCTTATTGCCC 100 364
NDY49_RS00995  193158 ..  193185 +  -9.2   -2.8092   GATACCGAGTCGTCA        TTGCGA-GCAGCC CTA GGCTGCGTGGCAA        TCTCGTCAAATATTC  74 71
NDY49_RS01000  194128 ..  194141 +  -2.5  -2.57935   GGCTGCGTTCAAAGG               TTAAT TTCT ATTAA                AGTTTTGCTTGTATA  40 22
NDY49_RS01005 NONE
        aspS  196817 ..  196839 +  -4.9  -3.35539   GTTTAAGGCATACAC           TCAACAATG CTTAT CTTTGTTGA           TGTCTTTCCTTCCTA  53 295
NDY49_RS01080  210632 ..  210648 +    -3  -5.07652   CAAAATATAATGGAA              TTACCT AAAAA AGGTAG              TTTTGTTTTACCCCA  68 172
        nusB NONE
NDY49_RS01115  218055 ..  218075 +  -6.3  -2.98453   TGTTTGTCCAAAATG            CTTATTAGT AAT ATTAATAAG            ATTATGTTTTGCATT  59 502
NDY49_RS01125  219820 ..  219857 + -18.9  -4.49958   AAATACAAAACTTTC   TAAAGAGTAAGGTTATA GATC TATAACCTTACTCTTTA    TTTATTTAATAACCT 100 46
NDY49_RS01140  221407 ..  221433 +  -6.6   -3.0806   GCTGCTCGCAATGAC         GAAAAGGTAGAG TTA CTTCGCCTTTTC         TATTCCGGGTTTACA  62 102
NDY49_RS01155 NONE
NDY49_RS01160  226813 ..  226829 +  -3.1  -5.11836   GGCTTCCCTCTAGAA              TATAAAT TTA ATTTATG              TTTTATTTTGACTAT  68 145
         ffh  228348 ..  228373 +  -4.1  -4.91712   ATTTTATCCAGTATG         TAACTTCTGTA GCAA TATTGAAGTTA          TTTTTCTGGATTCCC  70 120
        hemW  232202 ..  232222 +  -2.7   -5.3321   TGAAAATTATTCAAG            TAATTTTAA AGT TTATAATTA            TTTTTATTATTGCTT  69 38
NDY49_RS01180  233146 ..  233167 +  -8.1  -3.62522   TTTTTTGGGGAGTGC           CAT-GCAGTC TAC GACTGCGATG           TTGTTAGCCCGATTA  74 419
NDY49_RS01240  244729 ..  244744 +  -2.6  -5.60993   CTACCCAATGTCCTT              TATCAT TTTT ATGGTA               TTTTTTTCTACGGCC  76 65
NDY49_RS01255  250009 ..  250019 +  -5.4  -3.73775   ATTTTGCTTCGTCAA                 TTGC TAT GCAA                 TTTCCTCGCAATGAC  61 332
NDY49_RS01260  251044 ..  251058 +  -3.6  -4.31085   TTTTTAAATCCTCTT               TTGTAA TCT TTACAG               TTTTAGCTTCATCTG  62 339
NDY49_RS01270 NONE
NDY49_RS01275  252911 ..  252924 +  -3.8  -3.33162   GTATACTTAATATGT               GAGC ACCGTA GCTC                TTATAAGATGACGTA  49 101
NDY49_RS01280  253763 ..  253792 +  -6.5  -2.79823   GATAATAATAGACTC       CTGGCATAACTTA ATAT TAAGTTTTGACAG        ATTGGTTTTACAACA  58 278
NDY49_RS01285  254937 ..  254951 +  -3.6  -4.69464   ATGTGATTATAATGT               TACTTA AAA TAAGTG               TTTTTAAAATATTTT  66 51
NDY49_RS01290  255457 ..  255482 + -14.9  -5.63236   TTATATCTTTAGTAA         TACCCATAAGC TTCG GCTTATGGGTA          TTTTTATTTTTAAGT 100 56
        dapD  257418 ..  257441 +  -8.4  -4.30978   GTTTAACAAAGTAAA          CATATAAAAA TTTA TTTTTATATG           TTTTACTGGATTCCG  81 140
NDY49_RS01330  263072 ..  263083 +  -2.2  -3.53444   TGAAGTTAGCTGATC                CTGC AATA GTAG                 TTAATTATTGAGAGC  45 317
NDY49_RS01335 NONE
NDY49_RS01340  263743 ..  263757 +  -5.8  -2.71712   ATTTAGGGATTACTA               TCAAAA CAC TTTTGA               CTTTAGAAGAAAGGA  54 117
NDY49_RS01350  265666 ..  265679 +  -2.4  -3.48276   AGACAAGAAGAGGAG               GCAA AAGTAG TTGC                TTCTATAAAGGAAGC  45 116
NDY49_RS01355  266027 ..  266040 +  -3.9  -2.57013   ACAAAGATTTAGTCG               GTATT GCTT AATAC                TAAATTGGATTCAAA  44 15
NDY49_RS01360 NONE
NDY49_RS01365  266788 ..  266802 +  -4.3  -6.47325   CAATCCAGTAAAAAA               TGCTA ATTTA TAGCA               TTTTTTTTATTTTTT 100 395
NDY49_RS01400  272748 ..  272775 +  -9.2  -2.80113   GACACTGAATCATCA        TTGCGA-GCAGCC ATA GGCTGCGTGGCAA        TCTCATGAAATAATA  74 57
        grxC  275281 ..  275296 +    -4  -4.26938   AAGTAATTGACGAAG              CAATCT AAGG AGGTTG               TTATTATTTTATGAG  61 72
        gyrA  281059 ..  281104 +  -6.1  -2.60075   CGTGGATCGGTAAAA CCCA-CTGTGTCACCCCGTGGT CAC GCCACGGGATGACAGAGGTGAA ATTGCTTCACGCAAC  57 150
NDY49_RS01430 NONE
NDY49_RS01435  282295 ..  282311 +  -2.2    -3.484   GTTGGCGATTGTTTT              GCCATA TCGAT TTTGGC              TTATGCTATACTAAA  45 58
NDY49_RS01440  282602 ..  282616 +  -2.1  -2.74192   CTTAATTTAAGCAAA               TTTGC ACAGA GCAAG               TCATGTTCCACCGTG  40 36
NDY49_RS01445  282876 ..  282894 +  -3.2  -3.53012   TTTTTTAATCAAATC             TCAAATAT TAT ATAATTGA             TTTAAAAGAGAACAA  48 70
NDY49_RS01450  283576 ..  283586 +  -2.6   -3.5518   TATTAAAATTAAATA                 TTAA GAT TTAA                 TTATGTCAATATTAC  48 463
         def NONE
         fmt NONE
NDY49_RS01470  285862 ..  285875 +  -2.5  -2.76708   TGAAAATAAGAAAAA               TAATT GTGA AATTA                ATTCTGTATGCATTG  41 203
NDY49_RS01475  288922 ..  288932 +    -4  -4.24075   ATAATACAAATCTAT                 CTTT TTA AAAG                 TTTGTATTGCTAGCT  61 274
         rrf  289096 ..  289120 +  -3.7  -4.85433   TATCTTTCTTTCTTT          TTATGAGAATA TTT TATATTCATAA          TTTTTACCTTTCTCT  68 61
NDY49_RS01485  290030 ..  290040 +  -2.6  -3.79689   ATGGCAAATTATATG                 TAAT GCG ATTA                 TTATCCTTTTTATGT  50 23
NDY49_RS01500  293294 ..  293307 +  -2.4  -3.31263   ACAATATGGTGCTAA               TCGA ATATAC TCGA                TTCTGACGGTCAAAT  44 169
NDY49_RS01505  293895 ..  293911 +  -3.8  -3.39595   AATTTTTGATATAGC              TTACTA TTTTT TAGTAA              TTCTGCATGGTTACC  51 360
NDY49_RS01515  296143 ..  296154 +  -4.4  -3.65046   GTACTGTGGTACTCA                CGTA AGTA TACG                 TTATTACACTGGGAG  53 101
NDY49_RS01520 NONE
        cydB  298761 ..  298778 +  -6.3  -3.82486   ATAACCTTGACAAAA             CGTACTG TTTA TAGTACG              TTATTAATATTAAGT  66 170
NDY49_RS01530 NONE
NDY49_RS01535 NONE
NDY49_RS01540 NONE
NDY49_RS01545  301588 ..  301598 +    -4   -4.4017   AGATTGCTTCGTCAA                 TTAC TTT GTAA                 TTTTCTCCCAATTAC  63 126
NDY49_RS01550  302333 ..  302368 +    -2  -3.05807   TCAGCTAATAGCTGA    TCGTTTAAAAGAAAAA TAAA TATATTTTTTAAGCGA     TATATGCTATTTTGG  42 7
NDY49_RS01555 NONE
        thrS  306204 ..  306216 +  -6.3  -2.71011   TAATACGTATCATAG                GGATA TGA TATCC                TAATTAGGAAAAAAT  57 71
NDY49_RS01565 NONE
NDY49_RS01570  307238 ..  307256 +  -2.4  -2.76162   TGTCTGTGCTATTCT             TAAAAACG CTC CGATTTTG             GTTTGAGATGAAGTA  40 1
NDY49_RS01575  307867 ..  307878 +  -5.8  -3.68727   GAAGTAATTGTTCCT                CCGA GATA TCGG                 TCTTTATCATTTATT  62 411
NDY49_RS01605 NONE
NDY49_RS01610 NONE
NDY49_RS01615 NONE
NDY49_RS01620  314115 ..  314125 +  -5.4  -3.09681   TCAAAACTTACAGTT                 TTGC CTC GCAA                 TTACGTAGCATTTTC  54 125
        parE  316281 ..  316291 +    -4  -4.26076   GATTGCTTCGTCACA                 TTAC TTC GTAA                 TTTTCCTCACAATGA  61 93
NDY49_RS01630  317825 ..  317836 +  -5.8  -4.30719   GCTCCTTTTAGTCAC                TCGC AATG GCGA                 TTTGTTATGCGAGCA  70 159
NDY49_RS01635  319433 ..  319449 +  -2.4  -3.34984   AAAAAAATTTCGGTA              TTATAA AAAAA TTATAA              ATTTTTAAAAAATAT  44 59
        ybgF NONE
NDY49_RS01645 NONE
NDY49_RS01650  322174 ..  322186 +  -3.5  -2.51814   GACAGATAGTGGGTA                TTAAT GGT ATTAA                ATATGTTGCTTGATT  44 55
        rplM NONE
        rpsI NONE
NDY49_RS01665 NONE
NDY49_RS01670  323626 ..  323656 +  -8.4  -4.75404   ATGGGGGTGAGTTTA       CTATAGTACTGTTA AGT TAACAGTTCCATAG       TTTTTAATAAAATTT  87 149
NDY49_RS01675  324297 ..  324307 +  -2.6  -3.19511   ATATAGAGATAAGTC                 TAAA TGT TTTA                 TATTAGGTTATATAG  43 192
NDY49_RS01680  324799 ..  324815 +  -2.4  -4.70046   ATGCATTAGGGCCTC              TTTATA AAAAA TATAAA              TTTTCTAATTTTATA  61 196
NDY49_RS01690 NONE
NDY49_RS01695  326095 ..  326107 +  -4.1  -2.74926   TAACTATACCAGCAT                TTGCT TTC GGCAA                TAATATATCCTTTAT  47 441
         efp  328402 ..  328429 +  -3.5  -3.15579   GCCGTAGGCTGCGTG        GCAATCTCG TTAAATATCC TGAGATTGC         TTAGTCAAAACTTAC  47 81
NDY49_RS01715  329366 ..  329376 +  -2.6  -3.40639   TTGTTATGATAATAT                 TAAT ATA ATTA                 TTAATTCATAAAGTT  46 71
NDY49_RS01720 NONE
NDY49_RS01725  330498 ..  330523 +  -5.3  -2.80622   GCATGGTTTGTTTAT         GTCATTCCCGC GTAG GCGGGAGGGAA          TCTAGTGAAATGTAT  52 79
        pssA NONE
NDY49_RS01735  332529 ..  332557 +  -2.6  -3.66784   ACGGATCAAAGTACG        TAATTTTTGTTA AAAAA TAGCAATAATTA        TTCTATTAACAGTAC  48 23
NDY49_RS01740 NONE
NDY49_RS01755  335274 ..  335292 +  -3.2  -3.67188   CCATAAAAATAACTT             TTAATATC AAT GATTTTAA             TATTTTAAACTGGAT  50 120
        murC  336898 ..  336908 +  -2.4  -5.10497   TCATTCCCGCGAAAG                 CGGG AAT CCAG                 TTTTTTAAATAAATT  65 66
        murB  338071 ..  338096 +  -6.3  -4.87665   TTATTTTATAATATG         TAACTTCTATA TCAA TATTGAAGTTA          TTTTTCTGGATCCCC  80 131
NDY49_RS01770 NONE
NDY49_RS01775  340049 ..  340059 +    -4  -3.97674   GCTTGCTTCGTCTCA                 TTAC TTT GTAA                 TTCTTTGCGTAATGA  57 100
        ftsA  341479 ..  341495 +  -2.3  -3.57627   TTTAGAAATATTTTG              CTAAGAA TTA TTATTAG              GTTTTTCTCTAGAAC  47 167
NDY49_RS01795  343914 ..  343926 +  -4.1  -4.15565   AATGAGGCACCTTGG                GCAAG CCC TTTGC                TTTTCAAATAATCAA  62 290
NDY49_RS01810  348641 ..  348657 +  -6.7  -4.67353   AAAAATAATAAAAAA              TACTAAT AAT ATTAGTA              TTTTTAGCTGGATCC  78 128
NDY49_RS01815  349769 ..  349783 +  -2.2  -4.20981   AATAATTTGGTGCTA               TTTTTT AAT AAAAAG               TTTCTAATTTATTAA  54 4
NDY49_RS01820  351162 ..  351174 +  -3.5  -3.13522   ACAGGCATTATTAAA                TATTT TAT AAATA                TCTTGATCCGGAAAT  47 473
         xth NONE
        pdhA  353831 ..  353846 +    -4  -3.03619   TGATGAAGGGGAGTT              GTATAC ACAG GTGTAC               TGTTAAGGCGTCATT  48 4
NDY49_RS01845  355324 ..  355344 +    -4  -2.83747   CTCAGTTGTTTCGCT            TTTAGTGG GTTTA CCTCTAAA            TCATTATCACGATTA  46 356
NDY49_RS01855  357381 ..  357391 +    -4   -3.4529   AAAATAGCTATAGCA                 TCAT TTA ATGA                 TTATCCTCATGCTGT  52 65
NDY49_RS01860 NONE
NDY49_RS01865  357928 ..  357938 +  -2.4  -2.76964   TCATTCCCACGTAGG                 CGGG AAT CCAG                 TCATCTTGAATGTCA  40 108
NDY49_RS01870  358719 ..  358742 +  -8.4  -4.30978   ATTTGATAAAATAAA          TCTATAAAAA CTAG TTTTTATAGA           TTTTACTGGATTCCC  81 125
NDY49_RS01875  360270 ..  360320 +  -5.6  -4.63172   ATTGCGAGTGAACTT TAGTTCGTGAGGCAATCTCAGG ACTTGTG CATGAGATTGCTTCGTCAATTA TTTTATAATTTCCTC  73 48
NDY49_RS01880 NONE
NDY49_RS01885 NONE
NDY49_RS01890  362441 ..  362451 +  -2.6   -3.1944   CTGTTTAATTAAAAA                 TATT TAT AATA                 TTACGTGATTTTGCT  43 7
NDY49_RS01895 NONE
        petA NONE
NDY49_RS01905  364874 ..  364888 +  -5.8  -3.89346   CTCGCAATGGCGTTT               TTTGTA TTA TACAAA               TTTATGAAGTAACCA  66 152
NDY49_RS01910  366071 ..  366088 +  -2.7  -3.26783   ACATGTTCAATGTCA             TTTCTGT GAAA GCAGGAA              TCTAGTTTTTTAATC  45 93
NDY49_RS01915  366736 ..  366763 +  -4.4  -2.91264   ATATAAGACTTGAAT        TTTAAATAGATA ATTT TATATATTTAAA         TATATAACTAACAAA  48 318
NDY49_RS01920  367306 ..  367320 +  -7.2  -4.38116   TGATTAATCAAACAT               TGCTAA ATA TTAGCA               TTTAATTTTTCTGAA  79 34
        lepA  372279 ..  372305 +  -8.8  -2.77999   AAGATTTGTTATAAG         GAAGTATCTGAA TCT TCCAGATGCTTC         TAATGTTCCTCGGTA  71 84
NDY49_RS01960  372379 ..  372390 +  -5.8  -2.83903   TTCGAGTCCGGCCCG                GGGA GCCA TCCC                 TCAATTTTTGACAAC  55 18
NDY49_RS01965 NONE
NDY49_RS01970 NONE
NDY49_RS01975  375340 ..  375358 +  -3.2  -3.81287   GCACCCAAGGCAATT             TAATGC ACTGCAA GCATTA             TTTAATGATCCTATA  52 346
NDY49_RS01980  376163 ..  376177 +  -2.8  -3.22884   GATCATTTGATAAAG               CTAGTT ATA AACAAG               TTAATAGGTTAATAA  45 65
NDY49_RS01985 NONE
NDY49_RS01990  378365 ..  378375 +  -2.6  -3.04461   GGCTATAATTAACAG                 TATT TTT AATA                 TATTAACAATAAATA  42 177
NDY49_RS02060 NONE
NDY49_RS02065 NONE
NDY49_RS02070  392096 ..  392106 +  -5.4  -2.61274   ATTGCGGACGTACAA                 TTGC TAT GCAA                 ATTCCTTGCAATGAC  51 125
NDY49_RS02075 NONE
      virB11 NONE
NDY49_RS02085 NONE
NDY49_RS02090  398026 ..  398056 +  -7.2  -3.91066   AGCAGGGATACAGGT       TAAAAAAATCTT GATTGCA AAGATTTTTTTA       TTATATTGTTTCACT  74 100
NDY49_RS02110 NONE
NDY49_RS02115 NONE
NDY49_RS02120  403582 ..  403594 +  -4.1  -4.72029   TTTTTATCTAATTTG                CTGCT TAT AGTAG                TTTTATTAGGTTCAA  70 259
NDY49_RS02135 NONE
NDY49_RS02140  408171 ..  408185 +  -2.9   -4.1347   GTAAGAATTTATATA               GTTAT TTGCC ATAAC               TTTATGTCATTCCCG  53 12
        thyX NONE
        tolB  410746 ..  410758 +  -4.9  -4.59882   TACTTCTCTACTATG                GTTTA AAA TAAAC                TTCTTTATTTTTTCA  68 185
NDY49_RS02160  412649 ..  412672 +  -3.2  -3.76107   GAATGATGCCATTTA          TATTCATCGT AGTT AGGATGGATA           TTATAATTTTTACCT  52 400
        mnmA  414736 ..  414776 +  -2.6  -3.16647   TACGAGGAGGGAAGC GA-CGTGGCACTCTAGTTA GACC TCATGAGATTGCCACGCTC  CTTTTAGTCGCTCGC  43 50
NDY49_RS02175  416273 ..  416331 + -26.4    -3.727   GCGAGGAGAGGCAAA GCCTTGACGTGGCAATCTCATGAAGT AGTACAA AATTCCTGAGATTGCCACGTCAAGGC TTTGCCTCTCCTCGC 100 60
        hisS  417842 ..  417856 +  -4.3  -6.22691   CAATCCAGTAAAAAA               TTCTG ATTTA CAGAA               TTTTTTTTATTATTG  93 229
NDY49_RS02185  418498 ..  418517 +    -5  -3.40382   TACCATTATGAACCG            CTTTCTGG GTTG TCAGAAGG             TTATAAGCTTTCGTG  57 206
        tolQ NONE
        tolR NONE
NDY49_RS02225  425022 ..  425041 +    -3  -4.04579   AGGGATGTCTTTATT            CATAA-AAC TTA GTTATTATG            TTTACTATTTGTAAA  55 418
NDY49_RS02235  426642 ..  426652 +    -4  -3.09384   TCTATTATAGATACC                 CAAA AAT TTTG                 ATTTATAATTTGATT  47 412
        hslV NONE
        hslU  435403 ..  435413 +  -2.6  -2.87051   CCTAGCAAAATAGTA                 TTTT AAG AAAA                 ATTTCATGATAAGGC  41 215
NDY49_RS02285 NONE
NDY49_RS02290  436171 ..  436183 +  -4.9  -2.87931   CGGTTATTGAGGCGA                TTCTT ATA AAGAA                TGTATGAAAGCTCCA  50 44
NDY49_RS02300 NONE
NDY49_RS02305 NONE
NDY49_RS02310 NONE
NDY49_RS02315 NONE
        lpxB  439286 ..  439301 +  -4.8  -4.41844   TGTCAAGAAACCGGA              TAAGTT TCCT AACTTA               TTTTGTAAAGCTTTT  67 211
        mltG NONE
        cyaY  441311 ..  441322 +    -3  -2.89323   CACTACTCTTCATTT                TACT TCGG AGTA                 TATATGAAAGATTTT  44 148
NDY49_RS02340 NONE
NDY49_RS02345 NONE
NDY49_RS02350  442141 ..  442155 +  -4.3  -3.60865   AAAAAATAATAAAAA               TTCTG TAAAT CAGAA               TTCTAATTTCAAATC  53 183
NDY49_RS02355 NONE
NDY49_RS02360 NONE
NDY49_RS02365  443913 ..  443928 +  -3.3  -2.57014   AAATGCTACCAAAGC              TGTGA CAGATT TCACA               ATGTTATGCTACCTT  42 71
NDY49_RS02370  444489 ..  444500 +    -3   -4.4715   TTTAAATATTCCTTA                TCTA AATT TAGA                 TTTTCTACATTCGGA  62 354
NDY49_RS02400  449287 ..  449299 +  -2.7   -5.1634   GAATCCAGTCAAGCA                TACAA AAT TTGTG                TTTTTATATGTTTAT  66 170
        ruvX  453648 ..  453671 +  -9.8   -4.2828   ATTTGACAAAATAAA          CCTATAAAAA CTTG TTTTTATAGG           TTTTACTGGATGCCC  91 151
NDY49_RS02430 NONE
NDY49_RS02435 NONE
NDY49_RS02440  455077 ..  455089 +  -4.8  -2.55267   GGACCCTGTGGACAA                GCCA CAGGA TGGC                TACCTTAGAGTGTTT  49 127
        capD NONE
        wecB NONE
NDY49_RS02455  458601 ..  458627 +  -3.2   -4.1891   TTTATCGCCGAATAT         TTATTAAAATTA TAA TAGTTTAAATAA         TTTATGTTAGAAGAA  55 11
NDY49_RS02460  459486 ..  459507 +  -3.1  -3.55444   AGAAGAAAAATCTAT           TTTTCTAAA ACTC TATAGAAAA            TTTAAACAATAAAAC  50 395
NDY49_RS02465  461643 ..  461666 +  -6.8  -4.28254   AGCTATTATGCAGGA          TTTTTGTACC CATA GGTACAATAA           TTTTAGCTGTTAAAG  74 302
NDY49_RS02485  465622 ..  465637 +  -4.8  -3.32867   TTAATGTACCTAGAT              CTAATT TTAT AATTAG               TGTGTTAATTTTTTC  53 409
        cyoE  469317 ..  469341 +  -8.7  -3.29386   AACTAACACTATATC          CACTATTAGCT GAG AGATAATAGTG          TTGGGTTACTTTTAT  74 13
NDY49_RS02520  470809 ..  470821 +  -4.9  -2.99179   TAACAATAGAGAAGC                TGAAA TTT TTTCA                TAGTTTAAGTTCTAT  51 140
NDY49_RS02525  471398 ..  471414 +  -2.9   -3.9902   AGGATCTGCTTGTTG              GTTTTCC TGC GGAGGGC              TGTTTTGTTCCTCTG  53 223
NDY49_RS02540 NONE
NDY49_RS02545 NONE
NDY49_RS02550  478336 ..  478348 +  -3.5  -4.07568   ATTTAACAAAATACA                TTATT CCT AATAA                TTTTCAAAAAGAAGA  57 123
NDY49_RS02555 NONE
NDY49_RS02560 NONE
NDY49_RS02565  479365 ..  479386 +  -5.9  -2.84298   TCTTTTTGTCCGCCC           TCTTGC-TGC ATG GCAAGCAGGA           TCATTCTGCCCTATA  56 378
NDY49_RS02625  486815 ..  486825 +    -4  -4.30995   TATGAAAATCTACCT                 TCAA GAT TTGA                 TTATTTTGTGCACAG  61 121
NDY49_RS02630 NONE
NDY49_RS02635  487391 ..  487425 +  -5.1  -2.67747   AAATACAATTATCCG    TTTATG-GATTCCCGC TTTC GCGGGAATGACATAGG     ATTGTGGTATGACAC  51 110
NDY49_RS02640 NONE
        xerD NONE
NDY49_RS02650  489638 ..  489648 +  -2.6  -3.36803   TAATTTAATCTATCA                 TTAA TAT TTAA                 TTATAAGTGAGATTA  45 98
NDY49_RS02655  490906 ..  490922 +  -6.7  -5.51353   GGATCTAGCTTAAAA              TACTAAT AAT ATTAGTA              TTTTTATTGTTTTTA  90 95
         lnt  493386 ..  493405 +    -3  -4.74801   TTGATAACAAAGGGT            TTTAGTAT TATT ATATTAAA             TTTTTAATAAAGTTG  64 21
NDY49_RS02670  493664 ..  493675 +  -4.4  -3.89448   GGTTTAAGTAATATA                CCTA TAAG TAGG                 TTATATGTTTTTGCA  57 34
NDY49_RS02675  495043 ..  495072 + -11.1  -2.84989   GATCGCGGGATCCAA       TTTAAAATACTAA AAAT TTAGTATTTTAAA        GTTACTTTTATGGAT  82 171
NDY49_RS02680  496569 ..  496596 +  -3.6  -3.03619   TAAAGAACTTGAAGA        GTAGTAACATGAA CAT TTTA-GTTACTGC        TCTTGAGCAATCCTT  46 22
NDY49_RS02685 NONE
NDY49_RS02690  498364 ..  498388 +  -4.3  -3.52539   TGCTACAGGAGTAAC          TAATGCTGGAG CTG CTACAGGATTA          TTATCATTAACATTA  55 254
NDY49_RS02715  502262 ..  502297 +    -7  -2.55544   TGCGAACGAAGTGAG    TGTGGCAATCTC AGGAAGTTGGAC GAGATTGCCACG     TCGCTTCGCTCCTCG  59 78
NDY49_RS02720  503313 ..  503341 + -14.7  -3.19091   ACTGAAAGGAGCGTG        GCAATCTCAGGAA TGT TGCCTGAGATTGC        TTCGTCGATGCCTAT 100 63
NDY49_RS02725  505702 ..  505714 +  -4.9  -2.63326   CTTGCGTTGAAGCTA                TAAAC GAG GTTTA                ATTACTATATCTTTA  49 12
NDY49_RS02730 NONE
NDY49_RS02735  506708 ..  506718 +    -4    -3.428   TAATTTTGATTATTT                 TTTG CTG CAAA                 TTATAAGGTTTCTTT  52 114
NDY49_RS02750  508992 ..  509018 +  -9.7  -4.26903   ATTTGACAAAATAAA         CACATAAAAAA CTTGT TTTTTTATGTG         TTTTACTGGAGTCCC  91 115
NDY49_RS02775  511170 ..  511181 +    -3  -5.39681   CTTGAATTATTAGTA                TTAC GGAA GTAA                 TTTTTATTTACTTAT  74 69
NDY49_RS02800 NONE
NDY49_RS02805  514447 ..  514479 +  -3.6  -5.53991   AGGCGGAAATCTAGT      AAAACCTATAAAAA ATTTG TTTTTTTAGGTTTA      TTTTTTTAATAAATA  81 293
NDY49_RS02810  514908 ..  514918 +  -4.6  -3.60412   TAAACATCAATAAAC                 CGGC TAT GTCG                 TTATGTATGGCGTTC  57 47
NDY49_RS02830  519082 ..  519092 +  -3.2  -2.95102   GAGCTCACCATACTT                 CTAC ACT GTGG                 GTTTGTAGCTCAGCT  44 31
NDY49_RS02835  519259 ..  519269 +    -4  -2.57564   GATGATATTGTCAAG                 CTAA GGA TTAG                 ATTATGAAAAAATAC  46 117
NDY49_RS02845 NONE
        folE  522229 ..  522239 +  -2.4  -3.20028   TCATTTCTGCGGAAG                 CGGG AAT CCAG                 TCATTTTATCATACC  42 54
NDY49_RS02855  523830 ..  523853 + -11.2  -2.81464   ATTCTTCGTAGACAA          TGATAGTATC ATAT GATACTATCA           TATAATGAATAGTAA  85 210
NDY49_RS02860  524803 ..  524821 +    -9   -3.2082   AAAGGGGATAAGAAT             CAAACTTA TTA TAAGTTTG             TGTAGTTTTTAATGT  73 2
        ruvA NONE
NDY49_RS02875 NONE
NDY49_RS02880  526807 ..  526844 +  -8.9  -3.23393   CTATTTTTTGGCTAT   TATTAGTCATTATATTTG ATT TAAA-ATAATGACTAATA   TATTATCACCTGAAA  74 73
        ruvB NONE
NDY49_RS02890  529718 ..  529741 +  -4.8   -4.2693   GACGAAGCAATCCAG          TAA-AAAATGC ATA GCATTTTTTTA          TTATTTTCCTAGATT  64 124
NDY49_RS02895  531207 ..  531224 +  -2.1    -3.695   ACATTTGGTTTAATT             TGAATAA TATT TTATTTA              TTTAAAATGTTTAGG  47 178
NDY49_RS02900  532188 ..  532225 +  -7.1  -3.23598   CACAAAGTGGTCGTG   GCAATCTCATGAGGT AATACAAA AACTCCTGAGATTGC    TTCGTCAATTACTTA  66 62
NDY49_RS02935  538005 ..  538042 +  -6.3  -4.33907   TCTCAGGATATTTGA   CGAGATTGCCACGCAGTC TAC GACTGC-TCGCAATGACG   TTTTGCCTCTTTCTG  72 89
NDY49_RS02940 NONE
NDY49_RS02945 NONE
         dut  540403 ..  540428 + -10.7  -4.31379   TACATATTAGATAAA         CCTATAAAAAA TAAG TTTTTTATAGG          TTTTACTGGATTCCT 100 108
NDY49_RS02955 NONE
NDY49_RS02960  543534 ..  543553 +  -3.6  -2.81326   CCGGTGATGATGCTG            CTTTAGAA TAGC TTCTTAAG             GTTATTCGCATTGTC  45 15
NDY49_RS02965  544735 ..  544747 +  -3.3  -4.64048   GCGAGCGACTGAAAG                CCTTG TTG CATGG                TTTGTTTATGTCATA  62 73
NDY49_RS02975  548179 ..  548195 +  -5.9  -4.12942   ATTAACCATAGTTTG              TAGCTGA TTA TTAGCTA              TTTTAGCAAGTTTAG  69 239
NDY49_RS03005  554293 ..  554318 +  -9.3  -4.77775   GGGAATCTAGTAGAA         TCTATAAAAAA CTTG TTTTTTATAGA          TTTATTTTATCAAAT 100 109
        lspA NONE
NDY49_RS03020  555399 ..  555419 +  -4.8  -2.93901   GAAGGTGAACAAGCA            TTAATGCA GGACA TGCATTAG            TATACTTGCTCAACT  51 5
        murD  557097 ..  557114 +  -2.8  -5.80727   GGGTCTAGTTAAAAA             TACTAA ATAATA TTAGTA              TTTTTTATTGTTTTT  81 29
        ftsW NONE
        murG  559785 ..  559799 +    -7  -3.20633   ACGTACCAAAGCGTA               CGCTGC GGT GCTGCG               TTCCGTGTCTTCTAC  65 325
NDY49_RS03050  560831 ..  560842 +  -4.4   -4.1891   CTTACTGTATGGCTT                CATC AGAT GATG                 TTTCTATTCAAGCAA  59 326
NDY49_RS03055 NONE
NDY49_RS03060  561324 ..  561340 +  -6.7  -5.07971   GGAGCTAGTCAAAAA              TACTAAT ATT ATTAGTA              TTTTTAGTTATTTTC  83 70
        dapF NONE
        mtaB  571303 ..  571313 +  -3.2  -4.44046   GGATTGCTTCATCAA                 TTGC TAT GCGA                 TTTCTTTGCAATGAC  60 159
        pheS NONE
        pheT NONE
        dnaN NONE
NDY49_RS03150 NONE
NDY49_RS03155  576266 ..  576301 +  -2.4  -5.02476   AATAATTAAATCTGC    CCTATGTCATTCCCGC ATAG GCGGGCATCGAGTGGG     TTTTTTGAGCCATAT  65 30
NDY49_RS03160 NONE
        leuS  579709 ..  579729 +    -9  -3.01497   TTTTTGAATCTGTCA            TCCCGCGA CTTGA TCGTGGGA            TCTAGTTTAAAATAC  72 184
NDY49_RS03210  586496 ..  586506 +    -4  -3.41051   GATTGCTTAGTCGAA                 TTAC TAC GTAA                 TTCTGCTCGCAATGA  52 148
        dapA NONE
        smpB  587946 ..  587984 + -14.9   -2.6296   TTGTTACATAGCTCG  TTT-TATGTCATTCCCGC GAAA GCGGGAATGACATATAGA   ATTACTTAGACTTTA 100 73
NDY49_RS03225  588966 ..  588977 +    -3  -3.73953   AAATTGCTTCGTCAA                TTAC TTAC GTAA                 TTTCCTCGCAATGAT  52 170
NDY49_RS03280  598434 ..  598445 +  -2.2  -3.42078   ACAATTAATAGGTGA                GTAC CGCA GTGC                 TTATAATACGATGTA  45 116
        recR  599151 ..  599162 +  -4.4  -4.69656   AAATTCTAGATGATG                TTCG CCGG CGAA                 TTTTATTACATCATT  68 80
NDY49_RS03300  600647 ..  600660 +  -4.5  -4.62002   TCCAATAGCTTTTTT               GGGGT TTTT ACCTC                TTTTATCTCCTTAAT  67 386
NDY49_RS03315  603626 ..  603651 + -10.7  -4.30978   TATTTGATAAAAAAA         CCATATAAAAA CTTG TTTTTATATGG          TTTTACTGGATTCCC 100 155
NDY49_RS03320  604785 ..  604799 +  -5.8  -3.17194   AGCAATACCAATAAA               TATGAA AAT TTCATA               TTAAATTAGACACCT  57 50
NDY49_RS03325  605912 ..  605928 +  -6.7   -2.5007   CAATGATTTTTTTTA              CAATTTA TTC TAAATTG              GTATTAATAGGTTCA  59 62
NDY49_RS03330  606929 ..  606954 +  -9.3  -4.92314   ATTTCATACAATAAA         CATATAAAAAA ATTG TTTTTTATATG          TTTTTCTGGATTCCT 100 137
        trxB  608010 ..  608020 +    -4  -3.49086   AATTGTTGCATTTAG                 TAAG ACA CTTA                 TTATAGTCATTGTGT  52 84
NDY49_RS03340  609699 ..  609716 +  -9.9  -2.78935   GTTCCTTTTATGTCA             TTCCTGC GAAA GCAGGAA              TCTAATAAAGAATAT  76 54
NDY49_RS03345  610002 ..  610020 +  -2.5  -2.72855   TTAACAATTGAATAT            GTTG-ATC CTTT GATGCAAC             TAATTAAAAGGTTTG  41 37
NDY49_RS03350 NONE
NDY49_RS03355 NONE
        pcrA  613061 ..  613082 +  -3.1  -4.33808   TTCTTTTTATAAGTT           TTAATGAAT TTTC ATTCATAAA            TTTTAAATTGGTTTG  57 22
NDY49_RS03365 NONE
NDY49_RS03370 NONE
NDY49_RS03375 NONE
NDY49_RS03380  615539 ..  615559 +   -14  -3.31726   GATTTTTTATTGTCA            CCCCGTGG CGTGA CCACGGGG            TCTTGTATCACCAGC 100 118
         lon  619321 ..  619337 +  -3.8  -4.90321   GGATCCAGTTAAAAC              TACTAA TAATT TTAGTA              TTTTGTATTGTTTTT  68 270
NDY49_RS03400  620106 ..  620118 +  -4.1  -2.77013   TAAATTTATTAATAA                TGATG TTA CGTCA                ATTGTTACCGGAGTC  47 151
NDY49_RS03405 NONE
NDY49_RS03415  621752 ..  621773 +  -3.7   -2.9268   TCTAACTTTACTTAA           TGCAGTAAT CTCC ATTGCGGCA            ATTAATTTTTGTGCT  46 119
NDY49_RS03425  622965 ..  622995 + -12.8  -3.62054   TAAATATAAATTAAT       TGTATAGGTGTTAC TTA GTAACGCCTATATA       TTAATTATTTCAGAT 100 82
        raiA  623770 ..  623788 +  -3.1   -2.9581   AAATAGGAAATAATA             CTAACGT ACAAG ACGGTAG             TGTAATTCATGCTTT  44 192
NDY49_RS03450  626907 ..  626920 +  -3.9  -3.31184   CAAATACAATTATAA               TAAAG TGTA CTTTA                TATTAATTATACTGT  49 6
NDY49_RS03455  627192 ..  627203 +    -3   -5.1361   ATAATCGTGGTATAT                TGAT ATAA ATCA                 TTTTTTAAGATTTCT  68 23
NDY49_RS03460  627736 ..  627749 +  -4.5  -3.05384   ATCTCTGAATCTCTT               GGTGA TACT TCGCC                TTGAATCGCAGCGGA  52 147
NDY49_RS03465 NONE
NDY49_RS03470  628262 ..  628275 +  -4.5  -3.00601   GGAACTCAATTATTT               CACTG AACA CGGTG                TATAGTTATAGTTTC  51 7
NDY49_RS03475  629139 ..  629149 +  -6.8  -3.19482   GATTTCAGCTAGTTG                 CGGT AAT ACCG                 ATTTTGGTAATATAA  62 457
NDY49_RS03480 NONE
NDY49_RS03485 NONE
NDY49_RS03490  630135 ..  630172 + -12.9  -4.40963   GACTAAAAACGCTCC   GTTGTCATACCGTGG CTTGACCA CCACGGTATGACAAA    TTCTTTTTAAGCAAT 100 64
NDY49_RS03495  630726 ..  630743 +  -4.1  -3.22951   TTGACTCCTAGGGTG             CTAGACA TTGC TGTCCAG              TATTATGAAGCTGTA  50 120
NDY49_RS03500 NONE
NDY49_RS03505  631566 ..  631578 +  -4.1  -3.21747   ATCGGTTTTCTTTCT                GTTAC GCT GTGAC                TTGATCGTGAGATGA  50 222
NDY49_RS03510  633975 ..  633987 +  -4.7  -3.07135   TTGTTGAGATGCAAA                ACGGC TAT GCCGA                TGCTTCTTTATCAAG  52 268
NDY49_RS03515  635642 ..  635660 +  -6.2  -2.66098   ATACCTGATCTTTAT             TTTTAAAA ATT TTTTAAAA             TAGATTTAGAATATT  57 119
NDY49_RS03520  638607 ..  638621 +  -3.6   -4.7923   TATAAATTAAAATAT               TTAAGT AGT GCTTAA               TTTATTTCTTTAAAT  66 87
        tlc4 NONE
NDY49_RS03590  656213 ..  656226 +  -5.3  -3.82748   AATAAATTTTCTTGC               CGATA AAAC TATCG                ATTTTTTGTATAATA  61 476
NDY49_RS03600  657698 ..  657716 +  -2.5  -4.26386   TATCAATCTTTATTT             TAGTTGT AAAAA ACAATTA             TTGTTTAGTTTTTAG  55 120
        pgeF  659477 ..  659487 +    -4  -4.02108   GGATTGCTTCATCAA                 TTAC TTT GTAA                 TTTCCTTGTAATGAC  57 195
NDY49_RS03620  660766 ..  660778 +    -2  -3.74747   GATTATAAGCTCTTG                TTCT TTTGT AGAA                TTTAGTAGGCATTGC  50 235
        rnpB NONE
NDY49_RS03645  667946 ..  667972 +  -2.3  -3.77808   TCGCTGCTCGCATCC        TCTCA-CGTACT TCTA AGTACGCTGCGG         TTCTGTTGTGCTGCG  49 89
NDY49_RS03655  669438 ..  669458 +  -7.7  -4.11295   GAGAATCCGCTACTT            TTAAGCTTT CTA AAAGCTTGA            TTTATCTCGCTTTAC  77 99
NDY49_RS03660  670977 ..  670989 +  -2.7   -2.6356   TTCAATTTTTCCTCG                CAATG ACG TATTG                ATTCTCGCTATAAAT  40 141
NDY49_RS03665  671972 ..  671994 +    -7  -3.01712   GGTTCTTCCGCTGGT           GCTATAACTG CCA CAGTGGTAGC           TCTTGGGACACCCGC  61 334
NDY49_RS03675  674376 ..  674392 +  -3.1  -5.14645   AAAATATTACTAAAT              TTAAATT GTA GATTTAA              TTTTTGTTAACTTCT  68 28
NDY49_RS03680 NONE
NDY49_RS03685 NONE
NDY49_RS03690 NONE
NDY49_RS03695 NONE
NDY49_RS03700  676391 ..  676406 +  -3.4  -4.26076   TAATACGGAGACATT              TTATTT CTAA AAATAA               TTTTCCTAAGGCTAA  57 123
        infC  676998 ..  677010 +  -9.1  -2.73483   TGAGGTTGCCGCGTC                GAGGC TTG GCCTC                TCCTTGCAATGACGT  74 106
NDY49_RS03710  678367 ..  678381 +  -8.6  -3.31263   TGAGATTGCTTTGTT               GCAACT TTC AGTTGC               TTCTCGCAATAACGT  74 91
        prfA  679592 ..  679608 +  -3.8  -5.80727   GGATCCAGTTAAAAA              TACTAA CATTA TTAGTA              TTTTTTATTATTTTT  85 116
        recJ NONE
NDY49_RS03725  682977 ..  682998 +  -3.1  -4.19817   TTGGGTTGACAATGT           GC-TATTAAC GTT GTTAGTATGC           TTTTACATACATAGC  57 211
         rho  684529 ..  684547 +    -3  -2.83409   ATGATGAAGAGTCCT             GAACGTCC TAA GAACGGTC             TATAGTCAATTGATA  43 2
        sppA NONE
NDY49_RS03740  685822 ..  685838 +  -3.1  -3.68506   CAGAATGCCTAAAAA              TTTATTT AAG GAATAAA              TTTCCATGGCTCTTC  50 10
NDY49_RS03745 NONE
NDY49_RS03750 NONE
NDY49_RS03755 NONE
NDY49_RS03770  688556 ..  688577 +  -5.3  -4.45083   GGTAGCATAACGTAA           GCTTTTATGA AGC TCA-AAAAGC           TTTTCTAGATATCAA  69 98
NDY49_RS03775  689229 ..  689244 +  -4.6  -3.99327   TAATTCTTGCTTTTT              CTGCTC CTTT GTGCAG               TATTTTTAATAAATA  59 245
NDY49_RS03790  690946 ..  690958 +  -3.5  -3.37091   GTGAAAAGCAAAAAT                TATTA AAT TAATA                TTAGGTTTTAACAAT  49 15
NDY49_RS03795  691785 ..  691803 +  -7.5  -3.98484   AGGAATCTTAATATG             TGGTTTG AAAGG CAAACCA             TTTATACATTGAGTT  74 349
NDY49_RS03805  693010 ..  693024 +  -4.3  -5.60993   GCAATCCAGTAAAAA               TTCTG ATTTA CAGAA               TTTTTTTATCACCAC  82 138
        tlc3  700718 ..  700745 +   -10  -2.80113   TGCAAGCGGGCATTG        TTG-CGTGCAGTC GTA GACTGCATGGCAA        TCTCATGCAATAATA  76 48
NDY49_RS03855 NONE
NDY49_RS03860 NONE
NDY49_RS03865 NONE
NDY49_RS03970 NONE
NDY49_RS03975  716825 ..  716840 +  -4.8   -2.5805   ACCGGCAATGCAGTC              TGATTT AGCA AAATCA               ATTATAAAAAATCCT  49 116
NDY49_RS03985 NONE
NDY49_RS03990  717831 ..  717842 +  -4.4  -3.20991   TTTTATAGAAACGGA                TAGG AAAG CCTA                 TTGAATTAAATTAAA  49 10
NDY49_RS03995  718079 ..  718091 +  -6.3   -4.1891   AAGTCATTAACGAAT                TTACC AAA GGTAA                TTTATCTTGAGGAAA  70 3
NDY49_RS04030  724393 ..  724403 +  -3.2  -5.16237   ATTTTAATAAAAAAC                 CCGT ATG ATGG                 TTTTTTACTAAAGTT  68 71
NDY49_RS04035  725005 ..  725034 +    -6  -3.06261   TTCCATCACACAATA       TAATAGGTATAT ATAATA ATATATCTATTA        TCTATATCTAGATAT  57 216
NDY49_RS04040  725586 ..  725608 +  -9.9  -4.52589   AACTTCATTATATCT          TCCCTTCGCC TAAA GGCGA-GGGA           TTTTATATCCCCGAA 100 344
NDY49_RS04045 NONE
NDY49_RS04050  727534 ..  727545 +  -4.4  -3.17186   TTTTGCATCAACACC                GCAA TCTC TTGC                 TATATTACTATAATT  51 466
NDY49_RS04105 NONE
NDY49_RS04110  737451 ..  737462 +    -3  -4.12037   TATCTCCAGTCTGAG                TATC GCCG GATA                 TTTGTCCTGTTTCTA  57 216
        ykgO  746057 ..  746069 +  -5.5  -3.80466   TCGTCTTTGTAAGTC                CTCGG ATG CTGAG                TGTTTATTATATGCT  64 94
NDY49_RS04185 NONE
NDY49_RS04190  747802 ..  747826 +  -4.4  -5.05153   GGGAATCCAGTAAAA          CCTATAAAAA ACTTG TTGTTATAGG          TTTATTTTTTGGGAT  72 128
NDY49_RS04195  748234 ..  748244 +  -6.8  -3.60151   AGTAAAGAAACATGT                 GCAG TTG CTGC                 TTCTGATTTAAAAAA  67 223
NDY49_RS04200  749496 ..  749515 +  -2.2  -2.81476   ATTAACAGACTATGA            TCCA-AACA AAG TGTTATGGG            ATCTTTTGCCTAAAT  40 157
NDY49_RS04220  751546 ..  751558 +  -3.5  -3.44146   TTATACATAAATATA                TTTTT TCT AAAAA                TTACTTGTGGGACGA  50 56
NDY49_RS04225  752042 ..  752057 +    -4  -4.42788   CTAGAACTGACAACC              TCTTCT TAAC GGAAGA               TTTTGTAAGATTACA  63 55
        nuoN  756983 ..  756993 +    -4  -4.95806   GTAGTAATTTTATTT                 CTTA ATT TAAG                 TTTTTGTCCTCCTTT  70 448
NDY49_RS04260  760646 ..  760659 +  -4.5  -3.59033   TGTTTTGGAAAATGG               CGGCA TATC TGCTG                ATTTTCTTATTTCAA  55 396
NDY49_RS04270  763173 ..  763187 +  -4.3  -5.60993   GCAATCCAGTAAAAA               TTCTG ATTTA CAGAA               TTTTTTTATCACCAC  82 252
NDY49_RS04275  764868 ..  764896 + -19.1  -3.23598   ACGTTAGTGAGCGTG        GCAATCTCAGGAA TTT TTCCTGAGATTGC        TTAGTCAGTTACTTC 100 96
NDY49_RS04295 NONE
NDY49_RS04300  767377 ..  767394 +  -3.5  -4.21908   GAAAATAATTAGTAA             TGTGTTA TTAT TAATACA              TTTTAACTAATCATA  60 29
NDY49_RS04305 NONE
NDY49_RS04310  771053 ..  771072 +  -5.2  -5.62288   GTAAAACATATAAAA            TATAAAAA CTTG TTTTTATA             TTTTTATTTTATTAA  86 37
        radA NONE
NDY49_RS04320  772868 ..  772882 +  -7.2  -5.18357   AAATAATTAAAAAAA               TGCTAA AAA TTAGCA               TTTTTTACTGGATTG  86 61
        recO  773707 ..  773736 +  -8.1   -2.8655   TCTTATTTTATGATA       TACTTACTTAAGT AATT ACTTAAATAAGTA        TGTAATATGACTAGA  68 65
NDY49_RS04330  774034 ..  774046 +  -3.4  -3.72576   ATCCAGTTGAGTAAA                GCTT CTTAA AAGC                TTTACTCAAGAAGAA  52 91
        tsaB  774883 ..  774903 +  -6.2  -2.78463   TCCTAGTTAAAAGTA            GGAATCCA TTTAC TGGATTTC            TATAATCAACGAAAT  58 31
NDY49_RS04370  783250 ..  783267 +  -3.5  -4.62302   TAAGGATAAACTATA             GAAAAAT AAGC GTTTTTC              TTTTTCCGCATATTA  64 25
NDY49_RS04395  786422 ..  786440 +  -9.6  -3.53224   ATGAATCAGTAAAAT             CCACTGTG TCA TACAGTGG             TTTGACCACGGGATC  81 184
NDY49_RS04400  788045 ..  788062 +  -4.2  -3.61988   TCTTCTATATAGAGT             TATCTC CCAGTT GAGATA              TTGCTTTGTGACTGA  53 432
NDY49_RS04455 NONE
NDY49_RS04460  796663 ..  796684 +  -7.5  -3.25261   GGGCATCCAGTAAAA           CATATAAAA AATT TTTTATATG            CTTATTTTGTTAAAG  66 143
NDY49_RS04510  807448 ..  807458 +  -2.6  -3.80026   TTACGAAGAAAGTCA                 TATA AAA TATA                 TTATCTATTTACTTG  50 21
NDY49_RS04515  808171 ..  808209 +  -3.3  -5.49809   ATATATGGTTGCGTC  GCA-TACTGCTTTA-TACG AAC CGAAATAATGCAGTAATGC  TTTTTTTCGAGTTTC  77 304
NDY49_RS04560 NONE
NDY49_RS04565  813773 ..  813797 +  -8.7  -3.89435   TTAAAAATTCTATAA          TAGCGCATTAT GCA ATAATTCGCTA          TTTGCGTTATTTAAG  82 269
NDY49_RS04600  821179 ..  821194 +  -4.8  -2.86722   CTACTATAGGCTTAC              CTAAAT CATT ATTTAG               TATAGTAATATCTTT  51 375
NDY49_RS04625  826837 ..  826854 +  -2.7  -3.76141   AAGGTGGAAATAACA             TCAAAAG AATT CTATTGA              TATTTTACTCATAAT  50 125
NDY49_RS04630  827236 ..  827248 +  -7.7  -2.86654   AAACTATTAGGTCAA                TAGGC TAT GCCTA                ATTTCAATATATTTA  66 284
        mgtE  829072 ..  829086 +  -4.2  -5.30155   AATTATCAACTTTTT               CTAGGC AAT GCCTAA               TTTTTTAATTAATAG  75 485
NDY49_RS04660  831597 ..  831636 + -15.2  -2.63623   CCAGTGATTTTGTCC  ATTTTATGTCATTCCCGC GTAG GCGGGAATGACATAGAGC   ATGTGTTTTGAGCCA 100 38
NDY49_RS04670 NONE
        yajC NONE
        secD  834455 ..  834465 +  -2.4  -2.72144   CATTTTCACTTTTCT                 CTGG ATT CCTG                 CTTTCGCAGGAATAA  39 186
NDY49_RS04685 NONE
        ccmE  835712 ..  835723 +    -3  -3.22906   AGATTGCTTCGTCAA                TTAC TTAC GTAA                 ATTTTCTCGCAATGA  47 93
         ppa  836415 ..  836430 +  -3.4  -5.35222   AACAAAATAAACCTA              TAAAAA GAAG TTTTTA               TTTTTTATAGGTTTT  74 149
        murJ NONE
NDY49_RS04705  838933 ..  838946 +  -2.5  -3.29268   AAGTGACAGCGTAAT               TTAAT TAAT ATTAA                TATATTTAAATATAT  45 56
NDY49_RS04710  839734 ..  839750 +  -8.1  -3.31144   CGAGATTGCTTTATC              GAATTAC TGC GTAATTC              TTCTCGCAATGACAG  72 148
NDY49_RS04735 NONE
NDY49_RS04740 NONE
NDY49_RS04745 NONE
NDY49_RS04750  845386 ..  845413 + -17.2  -4.38927   TTATATGGTGTTTTA        TGTCATTCCCAC GGAA GTGGGAATGACA         TTTATTATCTAACAA 100 43
NDY49_RS04785 NONE
        dnaA  857014 ..  857024 +  -5.4  -4.52345   AAACGTCATACCGTA                 GTCA AGC TGAC                 TTTGTTTCATGGTCT  70 39
NDY49_RS04795  857894 ..  857915 +  -3.8  -4.48903   TTGCATCATATATAT           CTTTTCTT TTAGAC AAGGAAAG            TTTTCATCTCTTTTG  62 128
NDY49_RS04815  861291 ..  861302 +    -3   -4.3078   CAGATGATGTACAAG                GTTA TCTC TAAC                 TTTCTTAATGTCATT  57 15
        rpmI  868527 ..  868546 +  -3.6  -3.37344   AATATTAAAAAATAT            TTTTTACC GTAC GGTATAAA             TTAATTAACTAGGAA  49 2
        rplT  868930 ..  868964 + -14.4  -4.02424   CATATTTAAGTATTT     AATGTCATCTCGTGGT CAA GCCACGGGATGACATA     TTTATAATAATTAAT 100 32
        rpmH NONE
        rnpA NONE
NDY49_RS04890  869782 ..  869827 + -10.5  -4.57569   TGCGTTGTGGCATGG CTCGTTTTATGTCATTCCCGC TGTC GCGGGAATGACATCGAGTAGG TTTTTCAAGCCATGC 100 64
NDY49_RS04910  874004 ..  874014 +  -2.6  -4.72029   CCAACGAAAAAATTT                 TAAT AAT ATTA                 TTTTGTTCAATTGCA  63 174
NDY49_RS04945 NONE
NDY49_RS04950  882800 ..  882814 +  -2.8  -3.13343   GTTTACAATTAAGTT               GCAATA TTG TTTTGC               TTCGCTAATTCACAT  43 167
        ileS  887047 ..  887097 +  -3.8  -3.40522   TTAAGATGTTGATAA TTTAC-TTAGATTAATCTATAGT ACGCAC GCTATAAATTAATTTAAGGTAAA TTATCATGCACAACT  50 57
NDY49_RS04960  888021 ..  888034 +  -3.9  -2.63715   GGGAAAAAGATAACT               TACAT AGCG ATGTA                TCGTGTCAACTCACT  44 287
NDY49_RS04975  889233 ..  889243 +    -4  -3.41422   CTATTTTTGCTCTTC                 TTTG CTG CAAA                 TTATAAGATTGTTTT  52 203
NDY49_RS04990  893442 ..  893459 +  -5.7  -3.45047   AGCGAGATAAATCGA             GTTTTTA GTTT TAAAAAC              TTACTGTATTTATAT  60 146
NDY49_RS04995  897008 ..  897028 +  -6.9  -4.55295   CAAGGAGCGTGGCAA            TCTCAGG AGTCGTA CCTGAGA            TTTCTTTGTCGACAC  78 59
        ubiG  899402 ..  899438 + -14.1  -4.42653   CTTGATCGCGGGATC    CAGTTAAACATACTAAT AAT ATTAGTATGTTTAGTTG    TTTTCTGGATACCGT 100 220
        gltX  901022 ..  901038 +  -2.4  -2.69319   TAGGAAAAGAAAATA              TTTTAA AAAGG TTAAAA              ATTATATGAAAGATT  39 0
NDY49_RS05015  901893 ..  901904 +  -7.2  -2.88571   ATCTCTCTAAAAGAA                CGCG AAAC CGCG                 CTTCTCTTTCCAGAA  62 338
        grpE  910081 ..  910091 +  -3.2  -2.60212   TATTAAGTATACGCT                 GTGA TCT TCGC                 CTTGTGAACTCCTAG  42 87
NDY49_RS05065 NONE
NDY49_RS05070  911951 ..  911963 +  -3.5  -3.67611   TTTCTATAAATTAAC                TTTTT AGA AAAAA                TTGTGTTGGGATACG  52 85
NDY49_RS05075  912560 ..  912578 +    -6  -3.53012   GAATTGCATTAATAG             GTAGTGCT GCT AGGACTAC             TTTGCGAGAAACACC  60 76
NDY49_RS05080  912874 ..  912887 +  -5.3  -2.69598   AAAGTCTCTTAATTC               CACTA ATTG TAGTG                ACTTTTTCTCCAAGT  51 104
NDY49_RS05085  913594 ..  913623 +  -8.2  -2.78816   AGTAATTTAATTATA       GATAATTATTAA AATTTG TTAATAATTATC        TATAATGCACCCTAA  68 474
NDY49_RS05095 NONE
NDY49_RS05100  914842 ..  914854 +  -2.6  -4.82901   TAAAAGATATAGATA                GGGC ACATA GTCC                TTTTTATAAACAACC  62 387
NDY49_RS05105  915822 ..  915838 +  -5.9  -3.57144   CTGCACGAACTACTT              TATAGGA AAC TCCTGTA              TTTGCAGATGCAAAA  62 66
        rlmB  934312 ..  934324 +  -4.9  -3.17075   TTAAAGTCATAAACT                TTGAT TAT ATCAA                TTAACTTGAGAGACA  52 104
NDY49_RS05285 NONE
        fumC NONE
NDY49_RS05295 NONE
NDY49_RS05300  937111 ..  937133 +  -7.2  -4.01564   TACAATAATCCATAT           TTTTCATAAA AAG TTTATGGAAA           TTTCTAAATCTTTTA  74 291
        ftsZ  938703 ..  938721 +  -2.5   -3.5764   TCCAAAAAATTTAAA             GTTTTTT ATAGC AAAAAGC             TTTGCAAATCAAATT  48 184
NDY49_RS05310 NONE
NDY49_RS05315  940058 ..  940072 +  -4.3  -3.45571   AAAAAATAATCAAAA               TTCTG TAAAT CAGAA               ATTTTTACTAGATTG  52 79
NDY49_RS05340  945409 ..  945427 +    -4   -3.3771   ATAATACATACGCTT             TAATAAAT GTT GTTTATTA             TATTGTGCTTTAGAA  50 513
        xseA NONE
NDY49_RS05370 NONE
NDY49_RS05375 NONE
         xth  953160 ..  953203 +  -9.6  -4.60041   TGTTGCTATCTTAGG GTGCCGTATGTCATTCCCGC CTAC GCAGGAATGACATAGACCAC TTTTTAAAAATAAAT 100 52
NDY49_RS05385 NONE
         der  954906 ..  954916 +    -4  -4.21974   TATTACTAGATAATA                 TTCA TCA TGAA                 TTTATTAAGTAATAA  61 97
        mutM  961131 ..  961143 +  -3.5  -2.84298   AAAGCGCTTTATTAT                TTAAT GCA ATTAA                TAGTTGTAAAATATA  45 72
NDY49_RS05440  961862 ..  961873 +  -5.8  -2.87132   ATAAATGTTATAAGT                GCCA AGTA TGGC                 TATATAAACACAGGA  55 37
NDY49_RS05445 NONE
NDY49_RS05450  962629 ..  962639 +    -4  -3.34895   ATGAATATAACTCTA                 TGTT ATT AACA                 TTGATTGGAAGTAAA  50 95
NDY49_RS05455  963426 ..  963440 +  -5.7  -5.18357   AAAATAACAAAAAAA               TGCTG TAAAT CAGCA               TTTTTTACTGAATTG  81 172
NDY49_RS05490  969350 ..  969363 +  -2.5  -2.51849   TCCAAATTCATCGAG               TATAA TCCA TTATA                AATTTTAAATTATTA  40 4
NDY49_RS05495  970753 ..  970777 +  -5.9  -5.14965   AGGAATCCAGTAAAA          CATATAAAAAT TAA ATTCTTATATG          TTTTTTACTAGAAAT  79 28
NDY49_RS05510 NONE
NDY49_RS05515 NONE
NDY49_RS05520  976920 ..  976951 +  -4.5  -3.04853   ATGTCGAATTGGTAA      TGACTATTTCGAT ATAAGC AACGCAATAGTCA       TATGATTTACATTTG  51 41
NDY49_RS05540 NONE
NDY49_RS05545  980735 ..  980752 +  -4.3  -4.39652   AATTAAAAACTATTT             TTATAAT ATCA ATTATAA              TTATTTGTTTATCAT  63 388
NDY49_RS05555  981900 ..  981911 +    -3  -4.74215   TTTGCAAAAACACAT                CATT AGTT AATG                 TTTTGTTGGTGATAT  64 522
NDY49_RS05585 NONE
NDY49_RS05590  984835 ..  984864 +  -6.5  -2.94144   CTGGAATTGGTACTG       CCGTTTTTATGTG GTGG CAAATAAAACCGG        TGATTTGAATGCAAC  59 142
NDY49_RS05620 NONE
NDY49_RS05625  990950 ..  990970 +  -6.9  -3.03441   TCAACCTTAATGTCA            TACCACG ACTTGAG CGTGGTA            TCTTAGGGCATAATC  61 76
NDY49_RS05630  991845 ..  991858 +  -3.8  -3.20703   AGCTAACTTGTTGTG               TGGC TTTGCT GCCA                TTCCTGCGTCCTTAT  47 420
NDY49_RS05640 NONE
NDY49_RS05645  995418 ..  995428 +    -4  -3.47063   TAATTTTGGCTCTTT                 TTTG CTG CAAA                 TTATAAGATTTTTTT  52 101
NDY49_RS05650  997497 ..  997507 +  -2.6  -4.11938   AAAATCTATAATTAC                 TAAT ATA ATTA                 TTTATAGTTAATTTA  53 60
NDY49_RS05655  998871 ..  998911 +  -5.6  -3.30825   TCGGTTTGTCTTTTG TCTTTTATGTCATTCCTGC GAAA GCGGGAA-GCCATAAAAAA  TCTCTATTTTATAGA  59 85
NDY49_RS05660 1000832 .. 1000851 +  -2.9   -3.9467   AAAATTTTAATACTA            TTCGGATG ATCAG CA-CCGAA            TTGTTCTATCTGATT  52 65
         bcp 1013024 .. 1013061 +  -7.7   -4.0075   TCTCAGGATATTGGA   CGAGATTGCCACGCAGCC TAC GGCTGC-TCGCAATGACG   TTTCATTGCTTCCAT  76 105
NDY49_RS05760 1022064 .. 1022074 +    -4  -3.17685   CAAACCATATTGACC                 CAAA TAT TTTG                 TTAAATATATAATTC  49 478
NDY49_RS05765 1023601 .. 1023613 +  -4.1  -3.53366   AGTAAAAATACTATA                CTATC ATT GGTAG                TTATAATTAAATATA  52 460
NDY49_RS05770 1024299 .. 1024338 +  -5.1  -3.82604   AGTAAGACAGAGTTA  TTTAAAGCTCGGTTTAG AGTTAC CTAAACCGAGAGATAAA   TTATTACTTACCTAA  61 451
NDY49_RS05805 NONE
        coaE NONE
        dnaQ 1029819 .. 1029868 + -11.7  -3.16647   GAGAGACAAAGCCTC GA-CGTGGCAATCTCAGGAATT TTATATT ATTTCATGAGATTGCCACGCTC CTTTTAGTCGCTCGC  93 58
NDY49_RS05820 NONE
NDY49_RS05825 1033629 .. 1033644 +  -6.2  -2.66692   CTTCTAAAATAGATA              GCATAA TAAT TTATGC               ATTATGATAATAATC  57 495
        fabD NONE
NDY49_RS05840 NONE
NDY49_RS05845 1035996 .. 1036007 +    -3  -4.11484   GTGTACAATCATTTT                TATG GCTG CATA                 TTTTGAAGAATTAAA  55 8
NDY49_RS05850 1036543 .. 1036553 +  -2.6  -3.32294   ATTTAGTTAGAAAAA                 TTAT AAA ATAA                 TTCTAGAAACTTTGC  45 31
NDY49_RS05855 1037017 .. 1037027 +  -2.6  -5.86061   AGGGATTGGAGGACT                 TTTT GTA AAAA                 TTTTTTTTAATAGAA  85 351
        tlc5 1043156 .. 1043166 +  -4.6  -4.65895   TTTTGTGATCCACGC                 GGGT AAT GCCC                 TTTTTAGCTAGGAAC  68 139
NDY49_RS05920 1044350 .. 1044381 +  -3.1  -3.24597   ATAAAATATTTTTAA      CGAATTTAGAG GACACACCGA CTCTCAATTCG       TATTCATTGACCATT  47 43
         nth 1050813 .. 1050833 +  -4.7  -4.76087   AAGTTTAGTCATTAT            CCTCAATAA GTT TTATAGGGG            TTTGTTTATTATCTA  71 279
NDY49_RS05980 1052527 .. 1052543 +  -2.3  -3.84931   AGGCTCTTTATCAAT              TAGCA TTTCTTT TGCTA              TTTCAATATTTCTTC  50 196
NDY49_RS06000 1055439 .. 1055467 + -12.6  -3.14261   TACGAATGTTCAGGA       TG-TCATTCCCGC GGAA GCGGGAATGAACA        TTGAGTAGGTTTTTC 100 85
NDY49_RS06010 NONE
        rplU NONE
        rpmA 1057202 .. 1057218 +  -6.7  -4.14739   AAAAATAATTTAAAG              TACTAAT ATT ATTAGTA              TTTTAAGCTGGATCC  72 155
NDY49_RS06025 1058801 .. 1058812 +    -3  -4.60041   TATCTATGAAGTTAT                TTGA ACTC TCAA                 TTTTTAGGAGTAAAT  62 265
NDY49_RS06030 NONE
NDY49_RS06035 NONE
NDY49_RS06040 1060431 .. 1060441 +    -4   -4.2828   TGTGTTTTGTCTACC                 CATA CTA TATG                 TTTTACTGGATCCCA  61 462
        mnmE 1070350 .. 1070362 +  -6.3  -2.60194   CATTAACATACTTTA                GAAAC CAC GTTTC                ATTAATTAAAGGAGT  57 384
NDY49_RS06085 1071826 .. 1071845 +  -7.8  -3.49086   CAAAACTGATGTAAT            CCTCGACT TCAC GGTCGGGG             TTATAATAGTTATGT  71 166
        recA NONE
        fabG 1075913 .. 1075936 +  -6.2  -5.31275   TAAAAATTAATAAGA          TTATTTTGTG CTAG CATAAAATAA           TTTTTTGTGCTAGAA  82 38
        acpP NONE
        fabF 1077803 .. 1077826 +  -8.4  -4.39329   AGGAATCCAGTAAAA          CATATAAAAA CTTA TTTTTATATG           TTTATTCTATCAAAT  85 184
NDY49_RS06120 1079709 .. 1079719 +  -2.6  -4.72631   AAATACAAGATTAAT                 TTTT ATT AAAA                 TTTTCTTGACTTAAT  62 27
NDY49_RS06125 NONE
NDY49_RS06130 1081123 .. 1081144 +  -9.5   -4.6709   TATAACATTCTAAAA           GCTGTAACT ATAT AGTTGCAGC            TTTTGTATCATTTTG 100 46
NDY49_RS06175 1088741 .. 1088752 +    -3  -3.01924   AGCACCGCTTGAGAA                GATA TTAC TATC                 TATTAAACCGGAATC  45 432
NDY49_RS06190 1090066 .. 1090084 +  -3.8  -3.64912   GAGATAAGTACCTTA             GTCATCAT TGC AAGATGGC             TTATCTGTGTAGATA  52 34
        ftsY 1091216 .. 1091238 +  -7.6  -2.66634   TATTGAGTTGTCATT           GCGAGTAGCC GTA GGCTACACGG           TAATCTCATGAAGTA  65 69
        polA 1094238 .. 1094256 +  -4.5   -3.1247   GATGAGATACTAAAA             CAAGACC CTAAC GGTCGTG             TTGCCTGTGAAACAT  52 300
NDY49_RS06210 NONE
NDY49_RS06215 NONE
NDY49_RS06220 1096575 .. 1096593 +  -7.4  -3.37634   TTTAAAATCTCAAAA             TCTTGCCC TTG GAGCAAGA             ATTTTTCAGGTAATG  69 293
NDY49_RS06235 NONE
NDY49_RS06240 1105966 .. 1105986 +  -2.7  -3.38329   AAAACATATGACAAT            TATTAAAAA AAG TTTATAATA            TTGATATATATATTT  46 30
        tatC NONE
        serS NONE
NDY49_RS06255 NONE
NDY49_RS06260 NONE
NDY49_RS06265 NONE
NDY49_RS06270 NONE
NDY49_RS06275 NONE
NDY49_RS06280 NONE
NDY49_RS06285 1117845 .. 1117857 +  -4.1  -3.65693   TCTTCTAATGCTTTG                TTGGT GTA GCCAA                TTTGCACTCTGTCAT  53 17
NDY49_RS06290 NONE
NDY49_RS06295 NONE
NDY49_RS06300 NONE
        nuoK NONE
        nuoL 1121604 .. 1121640 +  -6.7  -3.99898   AACGTAAAGAGCGTG    GCAATCTCATGAAAT AATAACA AATTCCTGAGATTGC    TTTGTCAATTACTTC  71 80
NDY49_RS06315 NONE
        ccmA 1124587 .. 1124607 +  -8.4  -2.92896   TGAAGAGTAATTAAA            CGAGTATA TTACC TATACTCG            TAATCTTTGTGTAGT  69 499
NDY49_RS06385 1139844 .. 1139857 +  -5.3   -3.4072   GCAGCAACTAATAAC               CCTAT TACT ATAGG                TTATAGTAAAGGGTG  57 176
NDY49_RS06390 1140518 .. 1140545 +  -6.4  -3.14931   TTGCTTTTTAATCAA        CAACCAATAG CAAATTCA CTGTTGGTTG         TTCCTCGAAAATAAA  60 436
NDY49_RS06460 1150633 .. 1150666 + -15.7   -3.1883   CTATTCGGTGTGTAA     TTAAGAATAAGGATT TTAA AATCCTTATTCTTAA      TTGATGCGGGTTTTT 100 122
NDY49_RS06475 NONE
NDY49_RS06520 NONE
        infA 1158311 .. 1158325 +  -2.1  -2.90511   TTAACTAAGGGGCGT               GTGAT TCATC GTCAC               TAGTCTTTATAAGTA  41 8
NDY49_RS06530 1159016 .. 1159030 +  -4.4  -4.96501   TTAAAAATACTAAAA               TTATTA ATA TAATAA               TTTGTTTTTCTAGAC  70 54
NDY49_RS06545 1161596 .. 1161633 +  -2.9  -5.37865   GAAAGCTCTGAAATA   TTGTAATGCTTTATTTGC AGA GCAGATAAAGC-TAATGA   TTTTTTACTTATTAG  72 524
         map 1177775 .. 1177785 +  -2.4  -3.10775   TGACATTAAAGATTA                 CTGG ATT CCCG                 CTTTTAGCTAGGAAT  42 202
NDY49_RS06595 NONE
NDY49_RS06600 NONE
NDY49_RS06605 NONE
NDY49_RS06610 1179908 .. 1179925 + -11.3  -2.78816   GCTCAGTTTATGTCA             TTCCCGC AGAA GCGGGAA              TCTAGTAAAACATCA  85 110
NDY49_RS06645 1185409 .. 1185419 +  -3.2  -2.62463   TATTATTTCATGAGA                 TTGC CAC GCAG                 CTTATGGCTGCTCGC  42 102
NDY49_RS06650 NONE
NDY49_RS06655 1185912 .. 1185935 +  -4.7  -3.67877   AGGCAGCACTAATCG          GCATTTATT CTATTT AATGAATGC           TATTTATTGCCCACT  57 29
NDY49_RS06660 1187268 .. 1187280 +  -4.9  -2.85763   TATTATAATTTGTTG                TAGTA ATT TACTA                TCAGTTTTTAGCTCT  50 524
NDY49_RS06690 1192390 .. 1192434 +  -3.2  -3.81958   CCGTTTTAATCAAAA TTGTTATGAAAAATTTTATT TGGGC AATAATATTTTTAATACCAA TATTTCTTTCAGGGT  52 32
NDY49_RS06695 NONE
NDY49_RS06700 1193577 .. 1193587 +  -6.8   -2.7709   GATAAATATTTATAG                 CAGG TTT CCTG                 TAATATCTATTAGTT  60 43
NDY49_RS06720 1195245 .. 1195271 +  -5.9  -3.27463   TTGCTAGACTTCCAA        TGTCATTCCCGC CTAT GCGGGAATC-CA         GTTTATATTTATTAT  59 51
        htpG 1197231 .. 1197244 +  -2.5  -4.35116   AGCCATATTATAACT               TTAAA CTTT TTTAA                TTTTAATGTAGAATA  55 28
        hemA 1199022 .. 1199034 +  -4.9  -3.64822   GAATTTATAATTTGT                TTTTG CTG CAAAA                TTTCAATACAAGGCT  57 398
NDY49_RS06735 1200043 .. 1200053 +  -3.2  -4.08394   GTTAGCAATGCCTAA                 TCCT AAT GGGA                 TTTTACAAAAACTAT  55 341
         tig 1201714 .. 1201728 +  -2.1  -4.16284   CTGTATTTCCTCATC               TGTGA GAACA TCGCA               TTTATTAAGACATAT  54 267
NDY49_RS06765 1206398 .. 1206412 +  -4.4  -4.56367   TAATCCTTAATATTA               TATTAA AAA TTAATA               TTTATTTATAAAATG  65 53
NDY49_RS06770 NONE
NDY49_RS06775 NONE
        trmB 1208808 .. 1208834 +  -6.7  -3.09834   CCCCTATATTCACTT        GAGGTATAG-GG CTAA CTGCTATACCTC         TTACATCATGAGATG  59 47
        alaS 1221605 .. 1221615 +    -4  -3.73775   TCAAATATCCTGAGA                 TTAC TTC GTAA                 TTTCCTCGCAATGAC  55 136
        greA 1228117 .. 1228127 +  -2.6  -3.74542   ACCAAATCTTTTAAT                 TTAT CTG ATAA                 TTCTTGGGTATTATG  51 511
NDY49_RS06875 NONE
         ffs 1230174 .. 1230191 +  -5.5  -3.35798   GCTCGTTTTATGTCA             TTCCCGC GAAA GCAGGAA              TTCTCAGTAAAACAT  59 63
        dnaX NONE
NDY49_RS06890 1232107 .. 1232122 +  -6.1  -3.39274   ACCAGGCTTTAAAAT              GCCGT TTTAAC ACGGC               TCTTATGTCATTCTT  63 16
NDY49_RS06895 1233323 .. 1233341 +  -7.4  -2.90798   CATTGATATAAAAAT             GCCCGT CTCTGCT ACGGGC             TATAATAATTTCTCC  64 406
NDY49_RS06930 1237545 .. 1237557 +  -7.7   -2.6563   GTTTTTAATATGCAC                GCTAC AAT GTAGC                TACATTATTGAAAGA  65 83
NDY49_RS06935 1237894 .. 1237908 +  -4.3  -2.54634   ATATTTTACTGAAAG               CAAGT TAGAT ACTTG               GTTGCTGATATAACA  46 75
NDY49_RS06940 1238145 .. 1238157 +  -2.7  -2.90573   CCATAGTACTGGACA                GTTTT TGA AAAGC                GTTTGATGTCGCTCC  42 91
NDY49_RS06945 1239765 .. 1239779 +  -5.8  -4.72201   AATACTAAATTGCTG               CATAAA AAT TTTATG               TTATTTTTTATGAGA  77 493
NDY49_RS07040 NONE
NDY49_RS07045 1250708 .. 1250718 +  -2.6  -3.92799   ATGGCACAGTAGTTT                 TTAA TTC TTAA                 TATTTGTTATTTATT  52 29
NDY49_RS07050 1251626 .. 1251653 + -11.6  -3.76815   TTAATATGTACGTTA        TAATAGTCATAA TTTA TTATGACTATTA         TTTAGCCTTTTGCAT  95 192
NDY49_RS07065 NONE
        hemF 1254358 .. 1254382 + -11.5  -3.09135   TTTTTAAAATCATAA          CCGGAATGGCA AAA TGCTATTTCGG          TGTGTTGAAACTTCT  91 43
        hemE NONE
        hemH NONE
        hemJ 1255308 .. 1255320 -  -2.7  -3.75897   AAGCTTTAACTGAAA                TAGTA AAA CACTA                TTTCGGGGTGTAGAA  50 278
NDY49_RS07090 NONE
NDY49_RS07085 NONE
NDY49_RS07080 NONE
NDY49_RS07075 1254358 .. 1254382 -  -7.1  -3.68359   TTTTTAAAATCATAA          CCGGAATGGCA AAA TGCTATTTCGG          TGTGTTGAAACTTCT  69 179
NDY49_RS07055 1251629 .. 1251650 -  -8.9  -3.33671   ATATGTACGTTATAA           TAGTCATAA TTTA TTATGACTA            TTATTTAGCCTTTTG  74 26
        mutL 1247833 .. 1247847 -  -7.2  -2.50346   AATAAAGAGAGATAC               GTCATT GCG AATGAC               TAAAAGGAGCATGGC  62 119
        rpmG NONE
        rpsP 1247111 .. 1247131 -  -9.7  -3.82097   GTCAAATTTACTAAA            TCCCGCAAT CAA ATAGCGGGA            GATGACAGGGGCTGA  86 92
NDY49_RS07015 1246863 .. 1246890 -  -9.2  -2.80113   TATTATTTCATGAGA        TTGCCACGCAGCC TAC GGCTGC-TCGCAA        TGACGATTTGGTATC  74 80
NDY49_RS07010 NONE
        lipB NONE
NDY49_RS07000 1244726 .. 1244736 -  -5.4  -3.53224   CAGCTGCCCTTCAAA                 CTCT ATG AGAG                 CTGCAGTAATAATAG  57 113
NDY49_RS06990 1243005 .. 1243017 -  -2.7  -2.95962   GATAAAATAAGAGGA                TCAAT TGC ATCGA                TAATGTGGCGGAGAG  42 290
NDY49_RS06985 1242589 .. 1242611 -  -4.9  -3.90574   AACAATTATATCAAA           CTTTAACTG CTGAT CAGTTAAGG           GTTTAACATCATTAG  61 52
NDY49_RS06980 NONE
NDY49_RS06975 1241802 .. 1241818 -  -2.4  -3.45514   GAGACAGAAGAGGAA              TATAAA TTGAG TTTATA              TGTTCTCTATTTAAA  45 77
NDY49_RS06970 NONE
NDY49_RS06965 NONE
        dapE 1239944 .. 1239961 -  -9.9  -3.06915   ATGGATTCTATGTAA             TTCCTGC CTCT GCAGGAA              TTACATCAAAGTATT  78 31
NDY49_RS06955 NONE
NDY49_RS06950 1239198 .. 1239210 -  -4.9  -4.50976   TTTTATATTACAAAA                TTTTG CTT CAAAA                AATCTAGATTTTATT  69 118
NDY49_RS06925 NONE
NDY49_RS06920 1235287 .. 1235306 -  -5.2  -2.95298   TTCATTGAGGATACA            TATAATTA ATAC TAATTATA             GGCTATCATTTTATC  53 54
NDY49_RS06915 1234859 .. 1234871 -  -4.7  -3.53811   GTCATTCCTGCGAAA                GCAGG AAT CCAGC                TTTCTAAACAAATTA  55 45
NDY49_RS06910 NONE
NDY49_RS06905 1233696 .. 1233706 -    -4  -3.33525   TTTATTCATATAATA                 TACT ACA AGTA                 AATAAAGAATAGGTA  50 69
NDY49_RS06900 1232747 .. 1232766 -  -3.6  -4.61868   GATTTATACACAAAA            CCCCTTTT ATTT AAAAAAGG             CATGTTAGCACTTTT  64 253
NDY49_RS06865 1227383 .. 1227396 -  -3.9   -3.5944   ATTGATATTGGTAAA               TTATC GGGA GATAA                CATAAAATTCGGGGC  52 418
NDY49_RS06855 NONE
        dnaG NONE
        rpoD NONE
        truA 1221649 .. 1221672 -  -6.8  -3.51924   GTGGTATCCACATAA          CAATGCCT ATGCAGGG AGGCATTG           TAATGACAAAATTTA  65 47
NDY49_RS06830 NONE
NDY49_RS06825 NONE
NDY49_RS06820 1215013 .. 1215023 -  -8.2  -3.70622   TTACCGAAAATAATA                 CCGC CGA GCGG                 TCGTACTACAAAGCC  74 424
NDY49_RS06810 1213241 .. 1213255 -  -2.8  -2.91429   TAAAATCCTCATATA               GCTAGA TTG TCTAGA               TTATTAGAATATAAA  42 81
NDY49_RS06805 1212958 .. 1212972 -  -3.6  -3.60412   GAATTTCAGATACAA               CATTAG TAT CTAATA               AATATTTCATAATTC  52 32
NDY49_RS06795 NONE
        glyS NONE
NDY49_RS06785 1208732 .. 1208746 -  -4.2  -3.29973   TCAAAAAGCTATTAA               GGCG AATAGAA CGCC               GAAATTTATTATTTT  51 34
NDY49_RS06760 1204260 .. 1204270 -  -3.2  -3.63744   GCTTCTTTTAAAACA                 GCCA TTA TAGC                 TCATTATTATGATCC  50 382
NDY49_RS06755 1204022 .. 1204043 -  -3.1  -3.87323   CATCAGTAAATATAA           CCCTAATTT AATG AAATTAGAA            ATGAATTATGATTTA  54 97
NDY49_RS06750 NONE
        obgE 1201271 .. 1201288 -  -7.1  -3.16421   GCAACAAGCACGTAA             TTTTCCT GGGC AGGAAAA              TATGATATTTGATTT  65 313
NDY49_RS06715 1194557 .. 1194567 -  -2.6  -3.96893   AATAAACTTGAGAAA                 TATT TTT AATA                 TTTCGTTTTATAAGG  52 192
NDY49_RS06710 NONE
NDY49_RS06705 1193661 .. 1193673 -  -3.5  -3.79396   AATAATTAGTAATAA                TTATA ATC TATAA                TATTGTCGACGTTTC  54 79
        uvrA 1188836 .. 1188846 -  -2.6  -3.30972   CCATAAAACATGTAA                 TTTT TAG AAAA                 TAGCAAGGATTAGAT  45 138
NDY49_RS06680 1188487 .. 1188500 -  -2.5  -4.30978   TTTAATTGATCAAAA               TTATT TTCT AATAA                TTCTTTTAATGTATC  55 31
NDY49_RS06675 NONE
NDY49_RS06670 NONE
NDY49_RS06665 1186362 .. 1186379 -  -4.3  -2.51464   TTAGCACCGAGTAAT             TTTAATA ACAA TATTAAA              GAGATTAACTCATTT  47 512
NDY49_RS06640 NONE
NDY49_RS06635 NONE
NDY49_RS06630 NONE
NDY49_RS06625 1182123 .. 1182156 - -12.8  -3.25668   AATTCATGTATAAGA     TTTTGAATGAATAG GATTAA CTATTCATTCAAAA      ATCTTATAATTTTCG 100 66
NDY49_RS06620 1181229 .. 1181245 -  -9.4  -2.88544   TTTTATTTCTAGATA              CCGTGG TTAAG CCACGG              TATGATATTAGGTTA  74 68
NDY49_RS06615 1180245 .. 1180265 -  -8.3  -6.04953   ATACAAACAAAAAAA            GGAGCCCTT AAT AAAGACTCC            TTTTTCGTGTTAATA 100 65
NDY49_RS06585 1175797 .. 1175809 -  -2.7  -3.06538   AAGACAATTAAATGA                CAACA ATA TATTG                GGTAGAGAGTAAAGC  43 5
NDY49_RS06580 1173176 .. 1173191 -  -3.3  -4.07568   TTGCTTTTTGTAAAA              GCTTT TGTCCT AAAGC               TTTATCAAATTCGAA  55 221
NDY49_RS06575 1172635 .. 1172647 -  -6.3  -3.15152   TAATCAAAATTAAAT                CACTT AAA AAGTG                TTATAACGCAACTTT  60 227
NDY49_RS06570 1165808 .. 1165832 - -14.5  -5.42514   TTATAAAGCAAAAAA          GCCTATATAGT CAA ACTATATAGGC          TTTTTTTATGATTAT 100 52
NDY49_RS06565 1164042 .. 1164062 -  -2.5  -2.70932   CTGCTTCGTCAATTA            CTTCGCAAT TTC ATCGCAATG            ACGATACGGTATGAC  40 54
NDY49_RS06560 1162184 .. 1162195 -    -3  -4.26398   TAATACGAAAAAAGA                GTTA CAAT TAAC                 TTTTCCAAGATCTAT  57 296
NDY49_RS06555 1161805 .. 1161815 -    -4  -4.26076   TCATTGCGAGGAAAA                 TTAC AAA GTAA                 TTGACGAAGCAAAAT  61 106
NDY49_RS06550 1161020 .. 1161033 -  -3.1  -3.84648   TTGAATACTACTAAA               GAAGC AGCA ACTTC                TAAAGATTTCAAACA  52 137
NDY49_RS06540 1159643 .. 1159676 -  -2.1  -3.56558   CAATATTAACTATAA     TATATTATGTTTATAA GGT TTTTAAA-ATAATATA     TAACTTAAAATTAAT  47 69
        dksA 1158728 .. 1158739 -    -3  -5.38047   CAGTTAGACAAAAAA                TAGT TCAG ACTA                 TTGTTAAGTTCAAAA  74 407
NDY49_RS06515 1156919 .. 1156936 -  -3.4  -4.06491   TGAACCTGAGATAAA             GGCGAT GCTATT ATCACC              AATAGGAGGAAAAAG  55 244
NDY49_RS06510 NONE
NDY49_RS06505 NONE
NDY49_RS06500 NONE
NDY49_RS06495 NONE
NDY49_RS06490 NONE
NDY49_RS06485 1153420 .. 1153444 -  -5.1  -3.31144   CTTCTACTGTTATAA          CCGGTAAAT ACCGCTG ATTTACCAG          CATCAATAGTAATAT  56 225
NDY49_RS06480 1152486 .. 1152496 -  -8.2  -2.76189   GAACCGACGGAAGGA                 CCCC ATT GGGG                 TAATAAGCGGAGTAG  68 260
NDY49_RS06470 1151547 .. 1151570 -  -3.1  -3.30441   CACCACCTCCGACAA          CTACACCTC TCTTAC GTGATGTAG           CATCTTCTGCTGTAG  47 207
NDY49_RS06465 1150637 .. 1150662 - -12.1  -3.33696   TCGGTGTGTAATTAA         GAATAAGGATT TTAA AATCCTTATTC          TTAATTGATGCGGGT  95 43
        rsfS NONE
NDY49_RS06450 NONE
NDY49_RS06445 1147589 .. 1147599 -  -5.4  -3.02745   TTGACGTACAAATTA                 CCTT TAG AAGG                 AGGTTATGCAAGAAG  53 45
NDY49_RS06435 NONE
NDY49_RS06430 NONE
NDY49_RS06425 NONE
NDY49_RS06420 1146102 .. 1146117 -  -2.6  -3.11024   CGCTCCAAGATAAAT              CTTTAGC CTC GCTAA-G              TATAAATTCACCGCT  43 200
NDY49_RS06415 1145394 .. 1145406 -  -4.1   -3.2375   TACGCGAGAACCGAA                GCTCT TGT AGAAC                GACTCAGCCAATTTT  50 317
        miaB NONE
NDY49_RS06405 NONE
NDY49_RS06400 1140923 .. 1140940 -  -3.5  -3.57144   GTTCTTACGGTGAAA             TTTCTAA AGAA CTAGAAA              GCCATACATTAGTTA  52 96
NDY49_RS06395 1140518 .. 1140545 -  -5.6  -3.33696   TTGCTTTTTAATCAA        CAACCAATAGCA AATT CACTGTTGGTTG         TTCCTCGAAAATAAA  59 50
NDY49_RS06380 1138727 .. 1138763 -   -11   -2.9294   CACAGCATCGACACA    GCAATCTCAGGAATCA TACAC TATCTCCTGAGATTGC    TACGCTCCTTTCAGT  83 70
        lpdA 1137152 .. 1137166 -  -2.1  -2.99204   AATGAAACGTATATA               CGAAG ATCAA CTTCA               ACAAGAGCAAGGAGT  41 133
        atpH 1136544 .. 1136563 -  -2.2  -2.71011   ATTTCCTCGCAATGA            CTATATAA ATAT CTATACAG             CAATATTAACTGTCT  39 18
        atpA 1134764 .. 1134804 -  -3.9  -2.97029   TGCGAGGAACGAAAC  TTTGTTGCAATCTCAGGCA ACA TTCCTGAGATTGCCACGCT  CCTTTCAGTCACTCG  46 79
        atpG 1133758 .. 1133772 -  -4.2  -3.72968   ACGAGTATATCTAAA               CCGCTT CTG AACCGG               CTATAATCTCTATTA  55 6
        atpD 1132122 .. 1132155 - -12.5  -3.17875   AATATAGTAAAATTA     CTACGTCATTCCCGC CTAC GCGGGAATGACATCA      ACGTCACTTCAACGT 100 29
NDY49_RS06350 1131637 .. 1131647 -  -3.2  -3.31792   CGAGCAGCCGTAGAA                 CTGC TTG GCAA                 TCTCAGGAAGTTTGA  47 141
        acnA 1128907 .. 1128917 -  -5.4  -3.37056   ATTACGCACGTACAA                 TTGC TAC GCAA                 TTTCCTCGCAATGAC  56 53
NDY49_RS06340 NONE
        nuoG 1126344 .. 1126360 -  -2.1  -5.66684   TAATTTACAAAAAAA              GAGCTGG ATT CCCGCTT              TTGCAGGAATGACAT  80 67
        nuoH 1125067 .. 1125077 -  -2.6  -2.63357   AACGATTTTAAATAG                 TTTA TCA TAAA                 AATTATATATTAAAG  40 209
        nuoI 1124587 .. 1124607 -  -8.4  -4.00469   TGAAGAGTAATTAAA            CGAGTATA TTACC TATACTCG            TAATCTTTGTGTAGT  79 13
NDY49_RS06230 1100179 .. 1100200 - -13.1     -4.31   GTAAAGCAAGATAAA           TATTCCCGC CTAC GCGGGAATA            ACATCGGAAGCCTTA 100 50
        dnaE 1096392 .. 1096402 -    -4  -4.26076   TCATTGCGAGGAAAA                 TTAC GAA GTAA                 TTGTACGTCCGCAAT  61 167
        rpmF NONE
NDY49_RS06180 1088179 .. 1088193 -  -4.2  -3.89055   AGACATCTTCAGAAA               CTCGCT TAT AGAGAG               GAATTTGAAGGAGAC  57 156
         pal 1087332 .. 1087352 -  -5.4  -5.98781   TATAAGTAAAAAAAA            GGCCAAGT AGTAA ACTCGACC            TTTTAGGATACTATA  91 55
NDY49_RS06165 NONE
NDY49_RS06160 1085683 .. 1085728 -  -2.1  -4.70879   TCTAAATTCTAAAAA CACTT-CTATAGAACTGTTAAC AAA ATAAACAGTCCCATAGTAAATA AAAATTTAATATAGA  61 162
NDY49_RS06155 NONE
        mreC 1083545 .. 1083570 - -10.7  -4.35675   AAAAATCTAGTAAAA         CCATATAAAAA CAAG TTTTTATATGG          TTATTTTATCAAATA 100 227
NDY49_RS06145 1083112 .. 1083123 -  -2.2  -3.30781   TGAATTTAAATGCAA                GCCT GCGA AAGC                 AATAGGTAAACTACG  44 86
         gmk 1082346 .. 1082356 -  -3.2  -5.76237   TATAGAAAGAAAAAA                 CGAC AAA GTCA                 AAACGCTTTGTCTCG  83 23
NDY49_RS06135 1080911 .. 1080927 - -10.9  -6.09888   CCTGAACAAAAAAAA              GCAGCTT TAG AAGCTGC              AAAAGTACAATTTGA 100 228
NDY49_RS06095 1073127 .. 1073146 -    -5  -3.38326   CACAATGCCAATTAA            TAGCATTC AGCC GGATGCTA             GATTCATAATACCGT  57 55
NDY49_RS06090 1072049 .. 1072069 -  -4.2  -3.55714   AGACTCATCATAGAA            TTTATTTT AAATG AAAATAAA            AAAATCTAAGAGCCG  53 275
NDY49_RS06075 NONE
NDY49_RS06070 NONE
NDY49_RS06065 NONE
NDY49_RS06060 1062769 .. 1062781 -  -4.1  -2.63901   AGCTCACGAACCAAG                CAGCT AAG AGCTA                ATATATCACTTTCCC  46 31
        ssrS 1062523 .. 1062534 -  -4.4  -2.79718   TAATTTGGAAAAGAG                CAAG GCGT CTTG                 AAGCTGATAACCGCA  47 110
NDY49_RS06050 NONE
NDY49_RS06045 1060034 .. 1060051 -    -7  -3.36803   GAATTTTATTTAGAA             CCGACA CAGCAT TGTCGG              CTAGAGGAATATTTG  64 503
NDY49_RS06005 NONE
        rsmI 1053385 .. 1053395 -  -2.6  -3.97388   ATATTCTACTATAAA                 TTTA TAT TAAA                 TCTTGTGCTTATTCA  52 21
NDY49_RS05990 NONE
NDY49_RS05985 1052031 .. 1052045 -  -2.2  -4.90136   AAGCAATACTAAAAA               TTAATA TTT TATCAA               CACAATATCTTATGT  63 408
NDY49_RS05975 NONE
NDY49_RS05970 1050789 .. 1050807 -  -6.1  -3.96148   CGTTTTTATCATAAA             GACTAAA TAAAG TTTAGTC             ATTATCCTCAATAAG  68 20
NDY49_RS05965 1050212 .. 1050229 -  -5.7  -3.70674   GCATTATGTAAAATA             TTGATAA GCAA TTATCAA              GCTTCAGTACCGAAT  59 372
        grxD NONE
NDY49_RS05950 1048711 .. 1048739 -  -4.7  -3.18429   GAAAATTTTGACGAA        GCAATCTCA TACCAAAATCC TGAGATTGC        CACGCAGCCTACGGC  52 34
NDY49_RS05945 NONE
        lipA 1046362 .. 1046375 -  -2.3  -3.79419   CTTCTGCATAAAATA               CTCGT ATAC ACGTG                TGTTACACATATGAT  49 138
NDY49_RS05935 NONE
        ybeY NONE
NDY49_RS05925 1044336 .. 1044348 -  -3.5   -3.9644   GCTGCAATATAATAA                TAAAA TAT TTTTA                ACGAATTTAGAGGAC  56 62
NDY49_RS05915 1043106 .. 1043126 - -11.2  -3.13522   AGTCTGTGACCAAGA            TACCGTGG TCAAG CCACGGTA            TGACACCGAACGCGT  91 252
NDY49_RS05905 1040503 .. 1040513 -  -2.6  -3.17714   TTAAACTCGGATCAA                 TAAT AAA ATTA                 TTCGATTTTCCATTT  43 23
NDY49_RS05900 NONE
NDY49_RS05895 1040008 .. 1040027 -    -5  -3.59315   TTAATCATTTTTAAA            TCTAGAGT TTTA ACTCAAGA             ATCTTGCTTTTTATC  59 63
NDY49_RS05890 1039572 .. 1039589 -  -2.7  -3.25223   CAGGTAGACCATTAA             CAGCAAA AAGC TTTCCTG              ACAAGAGGGTCATAC  45 35
NDY49_RS05885 1039269 .. 1039283 -  -5.8  -4.63218   CCTCTTTCAATAAAA               GTTATT TAA AATAAC               TTAAACTTTATTATA  73 26
NDY49_RS05880 NONE
NDY49_RS05875 1038436 .. 1038449 -  -5.3  -4.81083   TCGAATGAGTAAAAA               GTTGT AGAC ACAAC                AGGTATGACCATACA  72 67
NDY49_RS05870 NONE
NDY49_RS05865 NONE
NDY49_RS05860 NONE
NDY49_RS05830 1033629 .. 1033644 -  -6.2  -3.26779   CTTCTAAAATAGATA              GCATAA TAAT TTATGC               ATTATGATAATAATC  61 275
        ssrA 1027036 .. 1027065 -  -5.9    -3.737   TAAGTTTTGACGAAA       CAATCTCA-GAAGT CCT ACTTTATGAGATTG       CCACATTCTCTACGT  64 105
NDY49_RS05795 NONE
        rnhA NONE
NDY49_RS05785 NONE
        mlaD 1025197 .. 1025217 - -12.7  -6.01369   TAAACAATAAAAAAA            CCGAATCTA AAC TAGATTCGG            CTAAATTTAATGATT 100 59
NDY49_RS05775 1024306 .. 1024331 - -12.7  -2.80354   CAGAGTTATTTAAAG         CTCGGTTTAGA GTTA CCTAAACCGAG          AGATAAATTATTACT 100 36
         tgt 1019494 .. 1019507 -  -2.4  -3.35679   TTTGTCTAGTTACAA               TCAC TTAAGT GTGA                TCTGCACAAACTTTT  44 104
        ligA NONE
NDY49_RS05745 1016702 .. 1016712 -  -6.8  -3.53012   TTGCTTCTTGCTAAA                 GCAG TTT CTGC                 ATCTGCTCTATCTTC  65 106
        rlmJ NONE
NDY49_RS05735 NONE
        lpxK NONE
NDY49_RS05725 1013029 .. 1013056 -  -9.2  -2.80443   GGATATTGGACGAGA        TTGCCACGCAGCC TAC GGCTGC-TCGCAA        TGACGTTTCATTGCT  74 33
NDY49_RS05715 1011447 .. 1011482 -    -7  -3.15758   ATAAGTTGTGACGAA    GCAATCTCA-GAAGTTG ATC CTACTTTATGAGATTGC    CGCGTCGATGCTACG  62 67
NDY49_RS05710 1010982 .. 1011006 -  -4.4  -4.39998   TATTGACACAATAAA          CCTAAAAAAA CAAGT TTTTTATAGG          TTTTACTGGATTCCT  63 109
NDY49_RS05705 NONE
        nagZ 1009553 .. 1009573 - -12.6  -3.38812   TGGGTCCTAAGAAGA            TACCGCGG TCGAG CCGCGGTA            TGACATTAAATGAAT 100 48
NDY49_RS05690 1003314 .. 1003335 - -10.9  -4.82212   GAAAGAACAAACAAA           GCCCCCTTT TTTC AAAGAGGGC            TTTTTTCTGGAGGAA 100 67
NDY49_RS05685 NONE
NDY49_RS05680 NONE
NDY49_RS05675 1001727 .. 1001737 -    -4  -3.61178   CCTATGCATCCTAAA                 TATG CAG CATA                 AGCAAATTTTTCTTC  53 209
NDY49_RS05670 1001095 .. 1001112 -  -3.5  -2.71791   ACGTTTTTGCCAAAT             CTATATC CGGT GATATAA              TAATCTCTTTGTTAG  44 361
NDY49_RS05665 1000551 .. 1000574 -  -3.2  -3.27475   GGCTTGAGGATAATA          GCCGTAATAT AACT ATATTAAAGC           CGGAAAATAGACTTT  47 346
NDY49_RS05615 NONE
        queC  987436 ..  987471 - -12.8  -3.02639   ATTTTTAAATAATGA    GTATACAAGGTGAACA ACGG TTTCCACCTTGTATAC     AAATTTACTTCATAT 100 81
NDY49_RS05605 NONE
        clpX  985349 ..  985366 - -11.3  -3.05384   GGCTTGTTTATGTAA             TTCCCGC ATAG GCGGGAA              TCCAGTAAAACATAT  91 157
NDY49_RS05580  982851 ..  982866 -  -4.7  -3.86202   TTTTACTATATTAAA              CTCGT TTTCAT ACGAG               GAAGGCGCATTTAAA  59 62
NDY49_RS05575 NONE
NDY49_RS05570  982330 ..  982349 -  -2.2  -3.60814   AAACCCTATATACAA            TTATACGA TTAA TAGTATAA             TTATTTAATAAATCA  47 30
NDY49_RS05565  981900 ..  981911 -    -3  -2.71831   TTTGCAAAAACACAT                CATT AGTT AATG                 TTTTGTTGGTGATAT  42 52
NDY49_RS05560  981502 ..  981514 -  -2.7  -4.05877   GAGCACATTAAATAA                CGTAA ATT TTACA                ACCTTAATCGAGGTT  53 73
NDY49_RS05535  977524 ..  977539 -  -4.7  -4.27617   TATAGCTTATTAAAA              TGAGC CGGCTT GCTCA               TTTATAATGCTAGCA  64 4
NDY49_RS05525  976813 ..  976823 -  -4.6  -3.08314   CGGAATTGTTAAAAC                 CGGC TCA GCCA                 CTCGGACCGCTAGAA  50 199
        ubiA  970753 ..  970777 -  -8.1  -4.31379   AGGAATCCAGTAAAA          CATATAAAAAT TAA ATTCTTATATG          TTTTTTACTAGAAAT  81 149
         tmk NONE
        metG  966942 ..  966952 -    -4  -2.77148   TCTATTAACATATTA                 TACT CTT AGTA                 GGTGTGTCATACTGC  47 63
NDY49_RS05475  965909 ..  965919 -  -2.6  -2.69849   TAATAATTGAAATAC                 TATA AAA TATA                 CATATTATTTTAAAA  40 30
NDY49_RS05470  965502 ..  965521 -  -5.1  -3.25223   TAGGCATATTATGAA            TCTTCAA TTTGTT TTGAAGA             TATAATGCCAGTGCA  56 240
NDY49_RS05465  964848 ..  964864 -  -3.8  -4.30231   AATAATGAATATAAA              TTTAGT TTAAC ACTAAA              AATTCTCAGTACATT  60 107
        ubiE  959349 ..  959360 -    -3  -2.81464   TTATCATCTATTATA                TACT CCGA AGTA                 AAATAAAGAATAGTA  43 153
        ubiB NONE
NDY49_RS05420  957527 ..  957537 -    -4  -3.49186   CACCGATAAAATATA                 TTTC TGA GAAA                 TGCAAAATCGATTTA  52 174
NDY49_RS05415 NONE
NDY49_RS05410  956605 ..  956621 -  -5.1  -3.15999   GCTTTAGATATTCAA              TCTACTC CTA GTGTAGA              TAATTCTCTGATAAA  54 186
NDY49_RS05405  956039 ..  956049 -  -5.4  -3.04144   TCGCTATCGGGAAGA                 GCAA GAC TTGC                 AAGTTTAGTAATTGA  53 298
NDY49_RS05400  955214 ..  955235 -  -3.7  -4.06185   GACACAAATAGGAAA           TATCTCAAG GGCA CCTGTGATA            TGTGTTAACTAATAA  57 286
NDY49_RS05395  954618 ..  954645 -    -7  -2.92668   TACTACGGAAGCACA        TCTGCTGCCTTT ACAA AAAGGAGGCAGA         AGAGTGCGTGTAAAA  62 276
NDY49_RS05360  947937 ..  947948 -  -2.2  -4.87133   ATTTTTCAAATAAAA                CGAG TATA CTCA                 CATGTTTAAAACTTT  63 23
NDY49_RS05355  946794 ..  946817 -  -8.4  -4.30978   GGGAATCCAGTAAAA          CATATAAAAA CTTG TTTTTATATG           TTTGTTTTTATCAAA  81 115
        rsmA  945724 ..  945735 -    -3  -2.76693   AAAGCTCAAAATGCA                TAGT TTTG ACTA                 GTTTTTTAACTTTCT  43 139
NDY49_RS05345  945145 ..  945155 -  -3.2  -3.22091   ACCCTAATGTATTAA                 TGCA CAT CGCA                 ACTAGATATTAATGA  47 261
NDY49_RS05335  944149 ..  944167 -  -4.7  -5.16133   ATTATAAGACAAAAA             CAAAATA TTTAC TATTTTG             ATAAAGATGACTAGG  75 91
NDY49_RS05330  942451 ..  942461 -  -5.4   -3.0894   CAATTACTTATGTAA                 TTGC CTC GCAA                 TGATATAAATAACGT  54 50
NDY49_RS05325  940820 ..  940853 -  -9.7  -4.08394   ACATGGCGCTCAAAA     GTATTTCATTCCTGC GGCA GCAGGAATCCAATAC      TACCTATCCACGTCA  91 242
NDY49_RS05320  940058 ..  940072 -  -4.3  -4.72772   AAAAAATAATCAAAA               TTCTG TAAAT CAGAA               ATTTTTACTAGATTG  68 103
NDY49_RS05275  933213 ..  933227 -  -2.8  -3.21914   TTAAATAAAATGATA               TGCTTC CCT GAACCA               TTTAAGTGGTGGAGG  45 32
NDY49_RS05270 NONE
         tuf  931708 ..  931745 - -16.1  -4.17657   TATTACACCTTAAAA   TATAAATACCTATTATT AAAA AATAATAGGTATTTATA    AAATCAATTAATTAT 100 33
NDY49_RS05260 NONE
        rpsJ NONE
        rplC NONE
        rplD NONE
        rplW NONE
        rplB NONE
        rpsS NONE
        rplV NONE
        rpsC  927357 ..  927371 -  -4.4  -3.08679   TTTTCGGAGCTAACA               TTTTAA TAC TTAAAA               TTAATTATATCTTTT  49 26
        rplP NONE
        rpmC NONE
        rpsQ NONE
        rplN  926067 ..  926083 -  -2.9  -3.39595   TTTAATCATTTATAA              CACTTCC TCT GCAAGCG              ACATTATTCTAACAT  46 3
        rplX NONE
        rplE NONE
        rpsN NONE
        rpsH NONE
        rplF NONE
        rplR NONE
        rpsE NONE
        rpmD NONE
        rplO NONE
        secY NONE
NDY49_RS05145  920338 ..  920348 -    -4  -3.68957   AGATAATATAAAAAT                 CTTT GAT AAAG                 TCAATTTATTTTTAG  53 26
        rpsM NONE
        rpsK NONE
NDY49_RS05130 NONE
        rplQ NONE
        rpsT  917703 ..  917713 -  -2.6   -3.0663   TCAATAAGAAGTATA                 TAAA TAA TTTA                 GCAAAATTTTATTAG  43 58
NDY49_RS05115  917354 ..  917364 -    -4  -2.82145   AAGTACTAAAAAATG                 CTAA AAT TTAG                 TATTTTTATACTGGA  47 235
NDY49_RS05090  912934 ..  912951 -  -2.7  -4.42619   CAATATTTTACAAAA             GTTTTCC GGTT GTAAAAC              GATTTACCTATGCTA  58 272
         rph  908332 ..  908346 -  -5.8  -3.55814   TACCAATCGAGATAA               GATAAT TAT ATTATC               AGGTGAACATATTGC  62 220
NDY49_RS05045  907018 ..  907058 -  -8.7  -2.83715   TTGATCAGCATTATA  GATCTAAAAATATTACT ATTACTA AACAATATTTTTAGATC  TATTTATAGCAGTTA  71 6
NDY49_RS05040  906261 ..  906288 -  -7.2  -2.71744   CAGCATCATATACTA        CTAG-ATACTCAC CAC GTGAATATTCTAG        AGCATAATTAAGGGC  62 231
NDY49_RS05035  905617 ..  905628 -    -3   -3.0782   GAATTTTTTAATATA                TACA GAGC TGTA                 CCATATAGATATAAA  45 165
NDY49_RS05030 NONE
        groL  903197 ..  903213 -  -2.3  -4.15006   ATATCCAGTTTAAAA              TGCTAAT ATT ATTAGTA              TTTTTTCTGGATACC  52 178
NDY49_RS05020  901501 ..  901516 -  -5.4  -3.52717   ATTATATAGAACTAA              TTACCG CAGA CGGCAA               ACAAGCTAAAATTTC  59 340
NDY49_RS05000  897277 ..  897288 -    -3  -2.90455   TCAGAACCAAAAGAT                TGAA AATA TTCA                 TAAGTGCTTAGGTCT  44 176
NDY49_RS04985 NONE
NDY49_RS04980  889326 ..  889343 -  -2.7  -4.45771   ATCTGAAAATATAAA             TAATGGA ATTA TCCTTTA              CAGAATCTAATATAT  58 40
NDY49_RS04965  887656 ..  887668 -  -6.3  -3.99678   ATCTTCATAAGCAAA                GCTTT TTT AAAGC                AATAAACGAAAATAA  69 85
        rpsU  881494 ..  881517 -  -6.8  -5.89921   ATGACAATAAAAAAA          GCTAGCAATA TTAA TATTTCTAGC           TTTATATTTAGTATG  95 57
NDY49_RS04935 NONE
NDY49_RS04930  879084 ..  879094 -    -4  -2.77629   ATATGAAATGACAAG                 TTAG GTG CTAA                 TATTGGTAACCATTT  47 83
NDY49_RS04925  878134 ..  878145 -  -4.4  -2.72991   TGACAGGTTTAATTA                TCAC TTTT GTGA                 TATGTACATGTTTAC  47 346
NDY49_RS04920  876555 ..  876576 -  -7.5  -3.18383   ATTTGGACTGAGTAA           TTACTTATA TTTG TATAAGTAA            TATACTAATTTAGTC  65 43
NDY49_RS04915  873706 ..  873720 -  -4.3    -3.794   GCGCAAGGCACGAAA               CCTAT AACTA ATAGG               AAAGCAACGAGTAAT  57 127
NDY49_RS04905  873062 ..  873074 -    -2  -3.69283   TAATGTATTTAATAA                TTCA TGATT TGAA                ATAATAACTGTCATT  47 307
NDY49_RS04900  871955 ..  871982 - -11.5    -5.055   GTAACCGGCAAAAAA        GGGATAAGATT TAAAAC AATCTTATCCC         TAGTTGCGAATAAAA 100 169
NDY49_RS04895  869540 ..  869554 -  -4.2  -3.53563   AGACCTCTTCGGAAA               CTCGCT TAT AGAGAG               GAATTTGCAGGAAAC  55 353
NDY49_RS04865  867317 ..  867329 -  -3.3  -4.89233   CATCAATATCAAAAA                GCAAC ATA GATGC                TGACAACATTATCTT  66 196
NDY49_RS04860  866025 ..  866035 -  -2.4   -2.9127   GACAATTAAAGATTA                 CCGG ATT CCCG                 CTTCTAGCTAGGAAT  41 128
         pth  865247 ..  865259 -    -2  -3.44284   GTCGTAGGAATAACA                TTGA ATATA TCAA                GCCATCTTATTCTTA  45 22
NDY49_RS04850 NONE
NDY49_RS04845 NONE
NDY49_RS04840 NONE
        ychF  863491 ..  863503 -  -7.7  -3.05963   ATTTGCACTTCAAGA                GACCA TTT TGGTC                AAATTGTTTTCATAG  68 52
NDY49_RS04830  863117 ..  863139 -  -3.4  -4.39748   TATCATATAAAAGAA           TACCTTCATT CTT AATGTCGGTA           TAAAAATAACGCCCT  60 191
NDY49_RS04825  862571 ..  862588 -  -6.3  -4.48317   TGATAAAATAAATAA             GCATAGA AGCA TCCATGC              CGGAATCTTCGCAAT  74 348
NDY49_RS04810 NONE
NDY49_RS04805  858732 ..  858749 -  -4.9  -3.01422   TATTCCTACAAATCA             TTTCAGC AAAA GCTAAAA              GTCCTTTAGAATTAT  51 273
NDY49_RS04800  858118 ..  858137 -    -3   -3.0641   AAAAACCCTTCAATA            TTTTTTAA GCTG CTAAAAAA             GATTTTATATCATTG  45 137
NDY49_RS04780 NONE
         mfd  851381 ..  851408 -  -9.2  -2.80113   TATTATTTCATGAGA        TTGCCACGCAGCC TAC GGCTGC-TTGCAA        TGACAGAGCAGGAAT  74 51
NDY49_RS04770  849712 ..  849737 - -10.7  -3.80114   CAGGAAGCCAGTAAA         CATATAAAAAG CAAG CTTTTTATATG          TTTATTTTATCAAAT  91 136
NDY49_RS04765  848155 ..  848191 -    -3  -3.83998   TTATTGGATACCAAA   TCGTCATTGCGCGCAGTC GTA GACTGCGCGGCA-G-CAA   TCTCGTCAAACATCC  52 125
        mraY  846923 ..  846936 -  -2.5  -2.98714   ATACCTACTATAAAT               TAATA TCAG TATTA                TAGCAAATTTCTTGT  42 110
       rickA  845337 ..  845351 -  -2.9  -4.17048   TCTTTGGTAAAAGAA               TAGTT GAAAT AACTA               AGAAGTTTAAAGGGT  53 92
NDY49_RS04730  843036 ..  843046 -    -4  -2.74144   TTGTTACTTTTAAAT                 CAAA TTC TTTG                 CTCTTGCTCCATAAC  47 9
NDY49_RS04725  842646 ..  842661 -  -2.6  -3.70412   AAGTTAATAAATGAA              TATCCT GAAT AGAATA               AAAACGGATCAAATA  48 44
NDY49_RS04720  842080 ..  842093 -  -2.3    -3.967   AATCCAGTAATTAAA               CGGTG CATA CACAG                TAAGTTTTGAAAATT  51 97
NDY49_RS04715  839737 ..  839747 -    -4  -3.05596   GATTGCTTTATCGAA                 TTAC TGC GTAA                 TTCTTCTCGCAATGA  49 97
NDY49_RS04665  831535 ..  831551 -  -5.1  -2.62983   CTCAGGGGTAGAGCA              CTACCTT GCC AAGGTTG              AAGTCGAGGGTTCGA  50 173
NDY49_RS04655  830183 ..  830204 -  -3.9  -4.14397   ATTTGACAAACCAAA           TAAGTAACAA TTA TTGT-ACTTA           TTAATTCTGTACCAC  57 103
NDY49_RS04650  829657 ..  829677 -  -4.1  -4.95896   AGAAAGCTAGAAAAA            TTATTGAAG CGA CTTTAATAA            ATTTTCTTCTGGTCG  70 131
NDY49_RS04640  828343 ..  828353 -  -8.2  -3.98052   ATATTAAAAGAAATA                 GCCG TAT CGGC                 TTTTAACGGTTTTGT  79 295
        gyrB  823307 ..  823339 -   -15  -3.85891   GAAAAACTGATTAAA      TTGTCATACCGTGG TCAAG CCACGGTATGACAC      CGATTATACTACACA 100 34
        murA  821934 ..  821964 -  -3.9  -3.12505   AGCGTATACTTAATA       CGTGCGTACTGCA GCTCT TGTAGAACGAACG       ACTTAGCCCATTTTT  47 58
        rpoZ  821424 ..  821445 -  -9.5   -3.1829   ATATCAGTACCAACA           CCGATAAGC ATTT ACTTATCGG            TTTCATAATCTTCGC  76 15
        acpS  820911 ..  820947 -  -4.6  -3.15579   GTAAGTTTTGACGAA   GCAATCTCA-GGAGT TTGTTATT ACTGCATGAGATTGC    CAAGTCGCTTCGCGC  52 117
        secA  816911 ..  816937 -  -2.4  -3.68445   AAAAATCTCGAAGAA         TTTTTACTTTTT CTA AAAATGTAAAGA         AATTGTAAGAAATAG  47 133
NDY49_RS04585  815567 ..  815577 -    -4  -4.32034   TCATTACGAGGAAAA                 TTAC AAA GTAA                 TTGACGAAGCAAGCT  61 226
NDY49_RS04580  815225 ..  815243 -  -2.4  -3.55453   AAGTGAAAATATTAA             GATAAGCT TTT AACTAATC             CCCAAGGTAATGGCT  47 3
NDY49_RS04575  814834 ..  814846 -  -4.9  -5.31456   TTAATTTATAAAAAA                TAAGT CGT ACTTA                ATAATTTATTATTCT  77 289
NDY49_RS04570  814340 ..  814358 -  -4.6  -2.55545   CCGGCAATAACATAC             TCATCAAG CAA CTTCATGA             CTTGAGCGGTATATA  49 100
NDY49_RS04555  812465 ..  812498 -  -4.1  -2.60802   AAACATATTAATTTA     TCCTATAATATAAAT TTAT AATTATATTATATGA      ACTTTTTAAAACTCC  46 72
NDY49_RS04550  812131 ..  812142 -  -4.4  -2.82623   CGTGCTGTAGAAGCA                GCTA CTGA TAGC                 TCATCACAATCACTA  47 93
NDY49_RS04545  811724 ..  811740 -  -8.1  -3.56325   CCGTTATAAGTACAA              TTGAAGA TCC TCTTCAA              TCATTCAAATCGGTT  74 214
NDY49_RS04540  811280 ..  811292 -  -2.7  -4.07306   ATATCCAATTATAAA                TAACT TTT AGCTA                TTGTACGTAAAGTCG  53 236
NDY49_RS04530  810729 ..  810747 -  -3.2  -3.31511   AATGAAATATTAACA             TAGATTAA ATA TAAATCTA             GTTTTTTAAAAGATA  47 23
NDY49_RS04525  810077 ..  810101 -  -4.4   -3.9163   AAATTACACATTAAA          CCTAAAAAAA CAAGT TTTTTATAGG          TTTTACTGGATTCCT  57 88
        uvrC  807868 ..  807879 -  -4.4  -3.50953   CCAAGAACTTAAAGA                TCCT ATTG AGGA                 TATAAAAAGCTAGCC  52 227
        mraZ NONE
        rsmH NONE
NDY49_RS04495  803231 ..  803245 -  -2.1  -3.13639   AATCCTACCAAGATA               CGAAG ATCAA CTTCA               AAAAGAGCAAGGAAT  42 121
NDY49_RS04490 NONE
NDY49_RS04485  800891 ..  800921 -  -5.7  -2.95789   ACCATATCAACCATA       TACAAAATATAAA TTAAT TTTCTATTTTGTA       CAGTTTTAAAAAATG  56 416
NDY49_RS04475 NONE
        mrdA  798013 ..  798029 -  -6.7   -4.8622   GGGTCTAATTAAAAA              TACTAAT ATT ATTAGTA              TTTTAAGTTGTTTTC  82 401
NDY49_RS04465  796663 ..  796684 -  -7.5   -4.2828   GGGCATCCAGTAAAA           CATATAAAA AATT TTTTATATG            CTTATTTTGTTAAAG  77 108
NDY49_RS04450 NONE
        ubiH NONE
NDY49_RS04440 NONE
NDY49_RS04435 NONE
NDY49_RS04430 NONE
NDY49_RS04425  789664 ..  789674 -  -2.6  -3.61232   TTTGCCATATAAATA                 TTAT TTT ATAA                 TTTTAATTCTTTTCT  48 28
NDY49_RS04420 NONE
NDY49_RS04415 NONE
NDY49_RS04410  787826 ..  787838 -  -6.3  -3.79419   CCTTTTTATAAAAGA                CTTGT AAA ACAAG                GAAAAGCCAAAAAGT  66 269
NDY49_RS04390 NONE
NDY49_RS04385 NONE
        tyrS  784061 ..  784097 -  -9.7  -3.87562   ATAGAAAATATACAA    TTTGTCTAATTGAAAGT TAC AGTTTCAATTAGACATA    ATATATTTGAGCCAT  90 87
NDY49_RS04375  782748 ..  782766 -  -5.4  -3.96892   AACCTTTACTACAAA             TATGCATT TAA AATACATA             TTATAGTAACTAGAC  63 504
NDY49_RS04365  781879 ..  781892 -  -3.9  -3.24747   TTGTTATACTATTAA               TTCTA GAAA TAGAA                TGGCTTGCTCCCGAC  49 489
NDY49_RS04360  781327 ..  781343 -  -9.4  -5.56673   ATTTATAACAAAAAA              GGTGGG ATAAA CCCACC              TATCTATAATTTTTA 100 160
        rimP NONE
        nusA  779123 ..  779136 -  -4.5  -4.18494   CATTCCTAGCTAAAA               GCG-GC GTT GCTCGC               ATGGCTCGTTTATGT  62 186
        infB  776402 ..  776412 -    -4  -3.91911   GTCATTGCAAGGAAA                 TTAC GAA GTAA                 TTGACGAAGCAATCT  57 176
NDY49_RS04340  774805 ..  774820 -  -5.4  -4.21922   CGATGTAAAATTAAA              TAGCTC TATC GAGCCA               CTATACATACGCCCT  66 139
NDY49_RS04290  765771 ..  765787 -  -4.5  -3.58305   AATTAAGCTTCCAAA              TAAAAAC GCC GTCTTTA              GCATTTTTGTTACAA  57 74
NDY49_RS04285  765216 ..  765234 -    -4  -3.71487   TATTATATTTAATAA             TAAATAAC CTT ATTATTTA             GTTACTATATTAACA  55 107
NDY49_RS04280  764639 ..  764649 -  -5.4  -3.60627   GCAGGCGATGCTAAA                 CATG CCG CATG                 GTTAGATAAGCTCAA  59 333
NDY49_RS04265  760149 ..  760160 -  -4.4  -3.62414   AGAAACTACAAAAAT                GGAT AATA ATCC                 TATTTGCAAAAATAT  55 226
        hemB  758138 ..  758162 -  -2.3  -2.69947   TAATTTTGATATAAT          TATAAAACATA TTA TTTATTTTATA          TCAGAAGCCATTTTG  39 16
NDY49_RS04250  756037 ..  756049 -  -2.7  -3.55761   GAGCCATTCGTCAAA                CTTCT CTA AAAAG                ATTAATGGCTTATAG  48 523
NDY49_RS04240  753679 ..  753691 -  -2.7  -3.04902   CTTCACTATATAAAC                GACTT ATA AAATC                TTGATTACTGTTTTT  42 337
NDY49_RS04235 NONE
NDY49_RS04230  752307 ..  752321 -  -5.8  -2.62003   AGAAGATTCCAGAAT               TTGTAT GGG ATACAA               TCGGACGTATTAGAT  54 410
NDY49_RS04215  750862 ..  750872 -    -4  -4.07568   TTGCCTGCTCTAAAA                 TCAT CTC ATGA                 TCCGGCCAATCAAAA  59 148
NDY49_RS04210 NONE
NDY49_RS04205  749745 ..  749760 -  -3.3  -3.04424   AAAAAGTAAGTAAAG              CACTT GGGGAG AAGTG               GACAATAAAAAATTC  44 517
NDY49_RS04175 NONE
NDY49_RS04170  744873 ..  744885 -  -3.4  -3.09557   AATCATCCTAAGATA                GATC AATTA GATC                TTTTTCTTGCAATAT  45 71
NDY49_RS04165  744459 ..  744475 -  -8.1  -3.19522   GCATGTAAGAGGTAA              GGATTTA ATC TAAATCC              CAAGCAGCATCATTA  70 13
NDY49_RS04160 NONE
NDY49_RS04155  742858 ..  742868 -  -5.4  -3.84639   CAATACGGACAATAA                 GCTA CGT TAGC                 CCAACGTATATCAGT  61 186
NDY49_RS04150 NONE
NDY49_RS04145  741540 ..  741553 -  -3.1  -3.52896   TTAGGATTCATATAA               GCTCCC ATC GGGA-C               TTTGCACTCTCCTTT  48 295
NDY49_RS04140 NONE
NDY49_RS04135 NONE
NDY49_RS04130 NONE
        lpdA  738246 ..  738262 -  -6.7  -3.92869   GGATCTAGTTACAAA              TACTAAT ATT ATTAGTA              TTGTGAGTGGTTTTA  71 199
NDY49_RS04120  737597 ..  737611 -  -4.4  -3.42613   AAATATAAATTAATA               TTTTAT ACA ATAAAA               AGTTAAGGTTATTAT  52 37
NDY49_RS04115  737310 ..  737321 -    -3   -5.1244   TTATGAATAGAAAAA                TTAG CCAA CTAA                 TGTAACTTATATCTC  68 93
NDY49_RS04100  734453 ..  734468 -  -3.3  -4.45723   AATAATACATGAAAA              CTTGA TAAATG TCAAG               TAATTATTAAAAAAT  60 51
NDY49_RS04095 NONE
NDY49_RS04090  732845 ..  732855 -    -4  -4.15565   TCCAGTACTTCAAAA                 CTTT TTA AAAG                 ATTTTTTTTAAAGCT  59 383
NDY49_RS04085  731530 ..  731543 -  -2.4  -3.71672   GTTGATCAAAACTAA               CTTG ATATAA CAAG                TAAACTACCGAAAAA  49 8
NDY49_RS04080  730382 ..  730402 - -15.5  -3.31443   TTCATAATAATGTAA            TACCGTGGC CCT GCCACGGTA            TCCGGTAAAAATGTT 100 432
NDY49_RS04070 NONE
        hemC  727909 ..  727924 -  -3.3  -3.63839   CTATTAAATAATGAA              CCTTA TAACAG TAAGG               GGATTTTTTGCACCT  50 434
NDY49_RS04060 NONE
NDY49_RS04055  726703 ..  726716 -  -2.5  -4.65895   CCGCGCACTGAAAAA               TTTTT GAAT AAAAA                ATATAGCTAACCTGT  60 482
NDY49_RS04025  723674 ..  723684 -  -2.6  -5.02606   GACTAAATAATAAAA                 TATT ATA AATA                 ATGGAAATAAAGCTT  66 112
         cmk  722967 ..  723005 -  -4.9  -2.54632   TAACGCCATAAAATC  GAATAAAATAACCTAGCA CTTT TTC-AAGTTATTTTATTC   TTTATATAATTTGTT  49 10
NDY49_RS04015  720925 ..  720977 -  -2.8  -3.65224   AGGTTATTTTAATAA CCGACGTGGCAATCTCATGAAGT AGCATAGA ACTCC-TGAGATTGCTTCGTTGA AACTTACAGTTTTTC  48 65
        clpP NONE
NDY49_RS04005 NONE
         fni  718079 ..  718091 -  -6.3  -2.64466   AAGTCATTAACGAAT                TTACC AAA GGTAA                TTTATCTTGAGGAAA  57 124
NDY49_RS03965  715596 ..  715623 -  -7.1  -2.79183   GCTATTTCTATTATA        TCATTTTGACC GAGTTT GGTCAAAATGT         AGAATAAAATTAACT  63 147
NDY49_RS03960 NONE
NDY49_RS03955  714551 ..  714565 -  -3.6  -4.21462   ATTGAGGATTTAAAA               TCACAT ATT ATATGA               TAACTGATTTTTCTT  60 39
NDY49_RS03950 NONE
NDY49_RS03945  713197 ..  713217 -  -3.3  -2.87825   AAAATCAGTAACAAG            TATTCGAGA TGC CCTTGAATA            TCGATTTGACAATTT  43 95
NDY49_RS03940  712709 ..  712719 -  -2.6  -3.67342   AAAAGAAGGAGAGAA                 TATT ATA AATA                 AGTGTTAATCCAACA  48 314
NDY49_RS03935  712127 ..  712137 -  -2.6  -3.56092   GCATTATGGTCTAAA                 TATA TCA TATA                 TTTAAATTTGAGTTT  48 19
NDY49_RS03930  710953 ..  710995 - -11.5  -2.63585   GTATAGTTTAAACAG TC-ATCGATGTCATTCCCGC GAAA GCGGGAATGACATAAACCGA GCCGTGCAACAACGT  85 46
NDY49_RS03925  709642 ..  709669 -  -9.2  -3.24365   GGATATTTGACAAGA        TTGCCACGCAGCC TAC GGCTGC-TCGCAA        TGCCGATATTCTCAA  78 37
        iscU NONE
NDY49_RS03915  708795 ..  708805 -  -6.8  -3.97947   TTTATTGATTATAAA                 GCGT TAC ACGC                 TAAAAGATTTGCCGC  71 18
NDY49_RS03910  706399 ..  706413 -  -4.3  -5.10497   AATCCAGTTAAAAAA               TTCTG ATTTA CAGAA               TTTTTTTATTATTTT  72 105
NDY49_RS03905 NONE
NDY49_RS03900 NONE
NDY49_RS03895 NONE
NDY49_RS03890 NONE
NDY49_RS03885 NONE
NDY49_RS03880 NONE
NDY49_RS03875 NONE
NDY49_RS03870  703509 ..  703521 -  -4.1   -4.9448   AGTTATTAAATAAAA                TTCCG GTT CAGAA                TATTTATAAAGACTA  73 232
NDY49_RS03845 NONE
NDY49_RS03840  698035 ..  698049 -  -2.1  -3.02973   TGAAAAATTGATAGA               CGAAG ATCAA CTTCA               ACAAGAGCAAGGAGT  41 217
NDY49_RS03835  696720 ..  696733 -  -2.5  -4.74132   ATACGGTATTAAAAA               TATTA TACT TAATA                TATTCATTCATTATT  62 36
NDY49_RS03830 NONE
NDY49_RS03825 NONE
NDY49_RS03820 NONE
NDY49_RS03815 NONE
NDY49_RS03810  693010 ..  693024 -  -4.3  -4.77157   GCAATCCAGTAAAAA               TTCTG ATTTA CAGAA               TTTTTTTATCACCAC  68 128
NDY49_RS03800  691507 ..  691531 -  -4.4  -4.30978   GGGAATCCAGTAAAA          CCTATAAAAA ACTTG TTTTTTTAGG          TTTATTTTGTCAATA  61 311
        trpS  689132 ..  689143 -    -3  -2.93769   AAATAATCTTATATA                TTTC AAGG GAAA                 TCTTGCAATATATGA  44 43
NDY49_RS03780  688798 ..  688817 -  -2.2  -4.87291   TAGGGGAAGTAAAAA            TAGTAAAA GATT TCTTACCA             CATCCTAGAGAACTT  65 220
NDY49_RS03760  687210 ..  687220 -  -2.4   -5.1361   ATAAATGCTAAAAAA                 GCTC GAG GGGC                 GATGGTCAAGGTTAT  67 236
        ppdK  663482 ..  663518 -  -7.6  -5.00884   ACGGGGTCCAAAAAA    CAATAAAAAATACTAA TAATT TTAGTATTTTTAACTG    GATCCCGTGGTCAAG  88 155
NDY49_RS03630  661425 ..  661435 -  -5.4   -3.6682   TCTGAGCTACGGAAA                 TTGC ATA GCAA                 TTGATGAAGCAATCT  59 167
NDY49_RS03625  660610 ..  660629 -  -2.1  -4.18161   GATAAATCCTTAAAA            CAAGCAA GTAAAG CCGCTTG             GGTCGTAGTATTGTG  52 42
NDY49_RS03605  657601 ..  657624 -  -6.8  -2.56656   TATGAAAATATAGAG          TGAAGTGC AGCTTAAA GCACTTCA           TCAGAAAAATAAAAT  60 154
NDY49_RS03595  655449 ..  655460 -    -3  -4.48741   TAATTGATGATAAAA                CTTT ATCT AAAG                 AGGTACGTTTACAAA  62 446
        truB NONE
        rpsO  649350 ..  649366 -  -8.1  -3.31263   ACGTCATTGCGAGAA              GAATTAC GCA GTAATTC              GACGAAGCAATCTCA  72 98
         pnp NONE
NDY49_RS03565 NONE
        lptC NONE
NDY49_RS03550  644606 ..  644617 -    -3  -4.38712   GTCATTGCGAGAAAA                TTAC GTAA GTAA                 TTGACGAAGAAATCC  60 137
        lptB  643705 ..  643723 -  -8.8  -4.38712   GTCATTCCTACAAAA             GAGCCTTG TTG CATGGCTC             GGAAAACCTACTCGA  88 126
NDY49_RS03540  642235 ..  642249 -  -4.4   -3.6707   TGTAAGAAAAATATA               TAAAAT AAT ATTTTA               GAAAGCAATAATGTG  53 41
NDY49_RS03535 NONE
        miaA  640469 ..  640485 -    -3  -4.77036   GGTTATTATCAAAAA              TCTGAT AAGAA ACCAGA              ATTAGAAAATAAAGT  64 181
NDY49_RS03445  625061 ..  625072 -    -3  -4.02108   GTCATTACAAGGAAA                TTAC GTAA GTAA                 TTGACGAAGCAATCT  54 106
        folD  624068 ..  624082 -  -5.8  -3.15985   AGAATATATGCAAGA               TAATGT AAG ACATTA               TGTAGAACTTGCAAA  57 93
NDY49_RS03420  621709 ..  621719 -  -5.4  -3.55761   TACGGATGCTGCAAA                 TAGC CCT GCTA                 ATGCTAATATAAATA  59 435
NDY49_RS03410  620551 ..  620562 -  -5.8  -3.12856   GATATAGGTAATATA                GGCT CATT AGCC                 GCAGTATAATGTTTT  57 20
NDY49_RS03395  619383 ..  619402 -  -5.6  -2.58999   GTGTGACACAGTAAT            GCTGCTAC TACT GCGGCAGC             TACTCAAAGCGGTGT  54 153
NDY49_RS03385  615587 ..  615607 -  -6.2  -3.04263   AGCCGAGTCCTAAGA            TACCGCAA TCAAG TTGCAGTA            TGACATTAAAGGTTA  59 41
NDY49_RS03310  600882 ..  600911 - -12.3  -2.89564   TTTTGATTTCATATA       TGATGCCTAGTTA TTTT TAACAAGGCATCA        TACATTAGTTTAATG 100 74
NDY49_RS03305 NONE
NDY49_RS03295  599523 ..  599533 -    -4  -3.75115   CTTGTACAAAATTAA                 TGTT GCT AACA                 AGAGCTTCGATATGA  55 227
NDY49_RS03290  599100 ..  599115 -  -3.4  -4.72272   CCTTTTGAGTAAAAA              TTAATA ATTT TATTAA               AGTTATAGTGAACCT  64 121
NDY49_RS03275 NONE
        rbfA  596839 ..  596871 -    -3  -4.50358   ACCTAAATATTAAAA      CAATTTATTAATAA TAATT TTTTTAATAAATTA      TTAGATTCCTATATT  60 40
NDY49_RS03265  595710 ..  595724 -  -7.2  -3.72576   GGCTGTTGTACTAAA               GCTTAA TTT TTAAGC               GTTTTTAGTATAACG  71 82
NDY49_RS03260 NONE
NDY49_RS03255  592623 ..  592639 -  -3.8  -5.80727   AAAAACAATAAAAAA              TACTAA AATTA TTAGTA              TTTTTAACTAGATCC  85 90
NDY49_RS03250  592218 ..  592230 -  -6.2  -3.98661   GATAGTTATTAGAAA                GCCG CTTAT CGGC                ATTAATAACATTAAA  68 81
NDY49_RS03245 NONE
NDY49_RS03240  591347 ..  591365 -  -7.5  -4.25283   ATGTCTTTATCAAAA             GTGCTAA ACTTA TTAGCAC             TATTGACTTCTCCTT  77 50
        sucC NONE
        sucD  588818 ..  588831 -  -3.9  -3.41454   AGAAATTAGGGATAA               TTAAG AGTC CTTAA                GAATTGTTGCGTAGA  50 248
NDY49_RS03205  584620 ..  584630 -  -2.4  -4.15061   TAATTTAGATATAAA                 GTGC ATA GCCC                 TCATTACGCACAGTT  52 4
NDY49_RS03200  583085 ..  583135 - -10.7  -3.18105   GCAAGCGACTAAAAG GAGCGTGGCAATCTCATGAAAC AATATAAA ATTTC-TGAGATTGTCACGCCC TCGGTTTTGCCTATC  85 85
        uppS NONE
NDY49_RS03190  581701 ..  581711 -    -4   -3.3663   ATTATCATAAATATA                 TCTT CAT AAGA                 AATAATATCAGAGCG  50 4
NDY49_RS03185  581344 ..  581365 -  -7.3  -4.78205   AAAAAAATTACAAAA           GACTGGATC CCGC GATCAAGTC            GCGGGATGACAACAA  82 48
NDY49_RS03180  580428 ..  580446 -  -4.6  -5.54192   AGTAATTTAAAAAAA             TCAATTAG CTA CTAATAGA             CTGGCTGTAATAAAT  85 207
NDY49_RS03175 NONE
NDY49_RS03170  580079 ..  580091 -  -6.9  -3.14848   GCTGCCTACCAAAAT                GCGGC AAA ACCGC                CACCAATACTTAAAG  62 3
NDY49_RS03115  567050 ..  567060 -  -5.4  -2.70215   AAAGCTTTATATAAG                 TGCA TTT TGCA                 GGATTCGCTTGTGTT  51 84
NDY49_RS03110  566348 ..  566362 -  -2.8  -4.09285   TACTAAAAGATTAAA               GTAACT TAT AGTGAC               GTTACTTATAACTGA  53 118
NDY49_RS03100  565747 ..  565766 -  -2.2  -3.23326   ACCAAACCACTAATA            TTACTATT TAGT ACTAGTAA             TGTTATCAATATCAA  44 67
NDY49_RS03095 NONE
NDY49_RS03090  565042 ..  565052 -  -3.2  -4.89339   AATTATCGACAAAAA                 CGAT CTC ACCG                 TCTTTAATTTCTTAG  66 37
NDY49_RS03085  564520 ..  564532 -  -3.5  -4.16842   CGGACGCTTAATAAA                TATTT CTG AAATA                CCCAATTATTTTTTC  57 183
NDY49_RS03080 NONE
NDY49_RS03075  563581 ..  563592 -    -3  -4.12532   TCTCTGATATAGAAA                TTGA CCTA TCAA                 ACATGATATTAATAT  55 103
NDY49_RS03065  561324 ..  561340 -  -6.7  -4.67353   GGAGCTAGTCAAAAA              TACTAAT ATT ATTAGTA              TTTTTAGTTATTTTC  78 172
NDY49_RS03045  559453 ..  559471 -  -6.8  -2.63769   AAAGAAGGGCATAAG             CTATTAAG TAA CCTAATAG             AAGAGGTGATTTAGC  60 255
NDY49_RS03025  555383 ..  555437 -  -7.6  -3.19513   ACAAGGTGAATTTAA TGAAGGTGAACAAGCAT--TAATGCA GGACA TGCATTAGTATACTTGCTCAACTTCA AAAATTGGCTACGTC  68 56
NDY49_RS03000  552153 ..  552163 -  -5.4  -2.89475   GAGCTAGATAGTATA                 CCTA TAT TAGG                 ATGTTGCAGTAAGTC  53 67
        coxB  550898 ..  550910 -  -3.5  -2.91264   GTGGTTAGGCATATA                TTAAA AAA TTTAA                AGTAATAGTTTTAGT  46 202
NDY49_RS02990 NONE
        ctaD NONE
NDY49_RS02980  547636 ..  547655 -    -3  -2.90751   GCTAATAATTTAAAC            TCACATATA GCT TAT-TGTGA            TAATATACAAGTAGA  44 339
NDY49_RS02970  544904 ..  544919 -  -5.4  -3.61806   ACAGGAATGACATAA              TGAGCC TATC GACTCA               AATGCAAATAATCAT  59 15
NDY49_RS02930  536011 ..  536021 -    -4  -2.83784   AATTAAAGTTTAAAG                 TAAG ATG CTTA                 TATACTCGTTTAATT  47 185
NDY49_RS02925 NONE
NDY49_RS02920 NONE
NDY49_RS02915  534163 ..  534192 -  -3.7  -5.07011   GACATAAAGTAAAAA       TAGTAAGGTATTA TATA TCATATCTTACTA        TCTGGTAATTTATTC  70 13
NDY49_RS02910 NONE
NDY49_RS02905  531898 ..  531913 -  -4.8  -2.59927   AAGGTGCAGAAGGGA              TGAAAA CAGG TTTTCA               TACACCGGCAGGTTA  50 435
NDY49_RS02840  519209 ..  519225 -  -4.5  -2.87243   GTATTATCATAATTA              TAAATCA AGG TGATCTA              TTAAAATTGCTAAGT  50 457
NDY49_RS02825 NONE
NDY49_RS02820 NONE
        tlc2  514423 ..  514440 -  -7.7  -2.62396   GATCGTTTTATATCA             TTCCCGC GTAG GCGGAAA              TCTAGTAAAACCTAT  65 398
         mdh  512342 ..  512356 -  -5.8  -3.81414   ATGTTCAATTAACAA               TACTAA TAA TTAGTA               TTAATTCAATATTTT  64 83
NDY49_RS02790 NONE
NDY49_RS02785 NONE
NDY49_RS02780 NONE
NDY49_RS02770 NONE
NDY49_RS02765  509763 ..  509773 -    -4  -2.65116   TCATCAGTCAAAGAT                 TCTA AAT TAGA                 TAAATTCTTTTAAAC  46 35
NDY49_RS02760 NONE
NDY49_RS02755  508992 ..  509018 -  -9.7  -4.77775   ATTTGACAAAATAAA         CACATAAAAAA CTTGT TTTTTTATGTG         TTTTACTGGAGTCCC 100 108
NDY49_RS02745 NONE
NDY49_RS02740  506572 ..  506582 -  -2.4   -3.7795   GCAAAGGCTATGAAA                 GCAC GAA GAGC                 AAAAATAGAAAAGCA  50 268
NDY49_RS02710  499797 ..  499819 -  -4.1  -4.21194   CTGCATTATGTAAAA          CCGTACTACC GTCT GGAAGT-CGG           TAATTAGCATTATTT  61 148
NDY49_RS02705 NONE
NDY49_RS02700 NONE
NDY49_RS02695  498024 ..  498040 - -10.9  -3.29558   GCATAATTTAGAAGA              TGCCGTA AAT TACGGCA              AAAGGCTTATAGTCT  86 211
        fabI  490659 ..  490692 -  -6.9  -5.00138   TAGTGAAATGAAAAA     TTCTTATACTCCTTT AAAG ATAGAAGTACAAGAA      CAGTTAAAACAAATC  88 366
NDY49_RS02620 NONE
NDY49_RS02615  483917 ..  483963 - -15.2  -3.28261   AGAATTGCACAGTAA TGCGACGAAGCAATCTCAGGAA TTT TTCCTGAGATTGCCACGCAGCC TACGGCTGTTTGCAA 100 88
NDY49_RS02610 NONE
NDY49_RS02605 NONE
NDY49_RS02600 NONE
        nuoD  480963 ..  480977 -  -5.6  -2.79952   AGAGCAACGCAAGTA               CAAGCC CAC GGCATG               ACAAATATATTACCT  55 35
        nuoE NONE
        yidD NONE
NDY49_RS02575 NONE
NDY49_RS02570  478667 ..  478677 -  -5.4  -4.45723   AATAAGAGACTAAAA                 GCTT ATA AAGC                 ACGCGAGCAAATGCA  69 326
        rimM  474098 ..  474117 - -13.6  -2.64803   GTATTTTTAAATGGA            TCCCGTGG CACG CCACGGGA             TGAAACAGAGGTGAA 100 89
NDY49_RS02530  471009 ..  471019 -    -4  -5.67283   AATCCAAATAAAAAA                 TCAT TAT ATGA                 AGACCTTATTATTTT  84 347
NDY49_RS02515  469340 ..  469380 -  -2.5  -2.61997   GCTGAGAGATAATAG  TGTTGGGTTACTTTTATAG AAG CTAAAATTGAAACCCAACG  TGAAGAAACATATCA  40 256
        rpsD  467631 ..  467663 - -10.1  -3.11988   GTGTAGGGAAGAAAG      TAAAAAGGCAGAT AAATAAA ACCTGCCTTTTTA      TAATTGTTAACGAGA  78 32
NDY49_RS02500 NONE
NDY49_RS02495  465682 ..  465693 -    -3  -2.72661   TATTACTTTTAATGA                TTGA TTGA TCAA                 GGTCGGAGGTTATTA  42 57
NDY49_RS02490  464935 ..  464951 -  -6.5  -2.52464   TTCTGCCTCAATCGA              GCCTGAA GCT TTCGGGC              GTACTATTATAGAAG  56 520
NDY49_RS02480 NONE
NDY49_RS02475 NONE
NDY49_RS02470  460905 ..  460929 -  -6.6  -2.62983   GGCACTTTGACATTA          TTTCAAGAAA ATTTA TTTCCTGAAA          ATATAAGAAGCGGTG  57 467
NDY49_RS02420  451428 ..  451438 -  -2.6  -2.94912   TTCTTAATTTATATA                 TAAA TTT TTTA                 ATAATTCAATAATTT  42 41
NDY49_RS02415  451140 ..  451150 -  -2.6   -3.5694   ATTATAAAAAAAGGA                 TTTA AGT TAAA                 CGGTACTTAATTATA  48 32
NDY49_RS02410  450113 ..  450130 -  -4.3  -3.80768   GATATATAAAACTAA             TTATTAT TACA ATAATAA              ATCGTTATAAATTGC  55 40
NDY49_RS02405  449155 ..  449175 -  -6.3  -4.32048   TAATAAGACGTAAAA            TATTAATTG TTT CAATCAATA            TTATAAGATATTTTA  72 311
NDY49_RS02395  448419 ..  448430 -  -3.6  -4.08485   TGGATCTAAAGGAAA                GCCG GGAA CAGC                 AAATATTGCCCTATT  57 183
NDY49_RS02385 NONE
        topA  445689 ..  445701 -  -4.1  -3.14683   AGACCCCGTGATCAA                GTCAC GGG ATGAC                ACTAAACCATTTACG  49 36
        gltX  444194 ..  444206 -  -4.9   -3.4582   GTATTTTATCAAATA                TACAA TTT TTGTA                CCAATAAGATTATTT  55 79
NDY49_RS02325  438853 ..  438867 -  -2.8  -4.22009   AGCAGGTAATAGAAA               GCCAAA AAA TTTTGC               AGCAATTAGGATTTA  55 255
NDY49_RS02270 NONE
NDY49_RS02265  432602 ..  432623 - -10.3  -3.23598   TAAGCAATCCAGTAA           GAAATGCTA ATTT TAGCATTTC            TTTAATTTTTTTCTG  83 111
NDY49_RS02260 NONE
         asd  431150 ..  431162 -  -3.5  -4.01888   ATTTTATATTATAAA                TAATT ATT AATTA                ATTCTTCAGCAATTT  56 6
NDY49_RS02250  429364 ..  429376 -  -4.1  -3.38727   AACAATGCTAATCAA                GTCAC GAT ATGAC                ACTTTAGTTATTAAT  52 29
NDY49_RS02245  427607 ..  427617 -  -2.6  -4.18702   AGAATTTTTAATAAA                 TATT GTA AATA                 TTTAGGTTTCGTAAA  53 69
NDY49_RS02240  426178 ..  426188 -  -2.6  -4.43173   AAAAATAATTTAAAA                 TTTA ATA TAAA                 TTCTACTTTTAATAA  58 43
NDY49_RS02230  424733 ..  424743 -  -2.6  -3.14683   AGATTGCTTCATCAA                 TTAT TTC ATAA                 TTTCCTCGCAATGAC  43 109
NDY49_RS02210  421090 ..  421104 -  -2.8  -2.91593   GAGGGTGTTATAAAC               CGTGAT AAT ATCAAG               CTTAAAAGTAATTGA  42 246
NDY49_RS02205 NONE
NDY49_RS02200  420037 ..  420052 -  -3.2  -4.83169   ATGCTGTTATAAAAA              GCCATG TATT CACAGC               CATCATATATTGATG  64 53
NDY49_RS02195 NONE
NDY49_RS02190  418786 ..  418798 -  -6.3  -2.51535   CTACTACAAAATTAT                CCTAA GTT TTAGG                CATTGCTCATTAAAT  57 347
NDY49_RS02165  412259 ..  412270 -    -3  -3.73775   GTCATTGCGAGGAAA                TTAC GTAA GTAA                 TTGACGAAGCAATCT  52 127
        rpoH  410490 ..  410500 -    -4  -5.14965   AGCTCCAGGAAAAAA                 CAAA ATT TTTG                 CAATTGATCTAACAG  73 250
        rpiB NONE
        mutS  403013 ..  403028 -  -6.2    -3.827   AATAATGAACCTAAA              CATGAA GAGC TTCATG               CGGTAATAGGTTTTT  65 485
NDY49_RS02105  400224 ..  400234 -  -2.4  -5.09426   CCGAATCCCAAAAAA                 GCCG GAG CGGA                 TTTTGTTAGTGAGCT  65 142
NDY49_RS02095  399319 ..  399329 -  -2.6  -3.14468   TTTTATTATATTCAA                 TAAA GCT TTTA                 AACTCTTGAAAACTT  43 108
NDY49_RS02055 NONE
       virB9 NONE
NDY49_RS02045 NONE
NDY49_RS02040 NONE
NDY49_RS02035 NONE
NDY49_RS02025 NONE
NDY49_RS02020 NONE
NDY49_RS02015  382832 ..  382845 -  -5.3  -5.25799   AAAATAATACAAAAA               TTCTG TAAT CAGAA                TTGTTTACTAGATTG  79 108
NDY49_RS02010  380472 ..  380484 -  -6.3  -3.62275   ATCCAGTACTTTAAA                GCTTT TTA AAAGC                TCAATTTATTGCGCT  64 103
        rodA  379227 ..  379243 -    -3  -3.95456   AAAGTCAATAGGAAA              TTTCGC TTTAT ACGAAA              ACCAGAAAGTGAAGT  54 88
NDY49_RS02000 NONE
NDY49_RS01995  378405 ..  378422 -  -3.5  -4.63586   ATATGATACATAAAA             TGCTACAG GAC CTGTA-CA             ATCTAATAAAAAAAA  64 43
        prfB NONE
NDY49_RS01945 NONE
NDY49_RS01940 NONE
NDY49_RS01935  368117 ..  368136 -  -7.8  -4.50358   ATTGAAATATGAAAA            GGTCATGC CAAA GCTTGACC             ATGGTATCAAGATAA  82 52
NDY49_RS01930 NONE
NDY49_RS01925  367081 ..  367103 -  -6.4  -4.08317   TAAGGTTAAAGTAAA           CGGTAATAAA TTA TTTATTACAG           GGAATATAGAAGAAA  69 469
        typA  354767 ..  354778 -    -3  -5.49729   AATCAGTGAAAAAAA                CTAA TCGT TTAG                 TTGTAGTGGAAGAAG  77 378
NDY49_RS01805  344580 ..  344604 -  -2.9   -3.6471   TGCCAAATTATACAA          GTTATATTATG TTA CAGAATATTAC          ACATATACTCGATGA  48 312
        lpxC  343195 ..  343209 -  -4.4  -3.90741   TAGAAATAAAAGCAA               TATTTA AAT TAAATA               TAAATGAAGAATATA  59 474
NDY49_RS01790 NONE
NDY49_RS01785  341369 ..  341405 - -10.4  -2.75577   GGACTGGAAAATGCA   TTTAGTGTCATTCCCGC TTCC GTGGGAATGACA-TAAA    ATGATCCACGCAACA  78 99
NDY49_RS01750 NONE
NDY49_RS01745  333029 ..  333042 -  -3.9  -4.54727   TGCTTGAAACTAAAA               CAAAT ATTT ATTTG                ATTTTTCCATTTATT  64 445
NDY49_RS01705 NONE
NDY49_RS01700  325389 ..  325399 -  -2.6  -5.24531   ATTGCTGATAAAAAA                 TATA TTT TATA                 TGGATTGGTTAGAGA  72 468
NDY49_RS01600  309731 ..  309743 -  -4.1  -2.57881   TAATTTTTTTAGAAG                CTCCA GGA TAGAG                TTTATCTCATTCTTG  46 141
NDY49_RS01595 NONE
NDY49_RS01590  308392 ..  308423 -    -6  -5.03314   TTTATTCCTAAAAAA      TTACTATTTAGGAA TAAA TGCCTAAATAGTTA       TATTAGTATATAAGT  79 116
NDY49_RS01585 NONE
NDY49_RS01580  307469 ..  307485 -  -2.2  -3.21695   GGAGCATCAAGTTAA              CGGATT TGTTT AAACCG              GCATTATATTAAGAA  44 83
NDY49_RS01510  293781 ..  293839 - -15.7  -2.76492   TGATTTAGTTTAAAG GTTGAGGCTGGTTTTATGTCATTCCTGC TTTC GCAGGAATGACATAAAACCAGGGT-AAT ACCTCCTCACACTAT 100 32
        queA  291379 ..  291393 -  -7.2  -4.67353   GGATCCAGTGAAAAA               TGCTAA CCT TTAGCA               TTTTTTGTTATTTTT  81 90
        zapE  290150 ..  290166 -  -5.3  -3.25202   CATCTGTAAATAAAT              TTTAATT AGT AATTAAA              GAGCTTTTTTAGCGA  56 50
NDY49_RS01455  282725 ..  282738 -  -2.5  -2.87132   TTGTGTTTTTAGATA               TTTTT GAGC AAAAA                TTAATAAGAACGCAA  42 452
NDY49_RS01425  281060 ..  281103 - -13.3  -3.06515   GTGGATCGGTAAAAC CCAC-TGTGTCACCCCGTGG TCACG CCACGGGATGACAGAGGTGA AATTGCTTCACGCAA 100 371
        uvrB  272629 ..  272642 -  -2.3  -4.85599   TTTATGGCACAAAAA               TTCCG GCTA CGGTA                CCAAAGAACATATCG  65 253
        hscB NONE
        hscA NONE
NDY49_RS01385 NONE
NDY49_RS01380 NONE
NDY49_RS01375 NONE
NDY49_RS01370  266788 ..  266802 -  -4.3  -5.18357   CAATCCAGTAAAAAA               TGCTA ATTTA TAGCA               TTTTTTTTATTTTTT  75 130
NDY49_RS01345  264339 ..  264349 -  -2.4  -4.77173   TTTTTACAAAATAAA                 GCTG TAC CGGC                 AACATTATCAAGAAT  61 41
NDY49_RS01320  259136 ..  259148 -  -2.7  -2.88434   AATAATTTATCAAAT                GTAAA TTC TTCAC                CGTTAATCTTAAGGT  41 96
NDY49_RS01315  258674 ..  258688 -  -3.5  -2.88544   TTTTAGTTCTAGAGA               GAGGT TTATT ACCCC               ATTTTGAGAAGTAGG  45 70
NDY49_RS01310  257676 ..  257708 -  -2.7  -2.55216   GATCACGTACAACAC      CAGCTGCTTTAAAAT ATG ATTCTGCAGCATCTG      TTTCCTGTTGTTTTT  40 60
NDY49_RS01305  257418 ..  257441 -  -8.4  -4.21141   GTTTAACAAAGTAAA          CATATAAAAA TTTA TTTTTATATG           TTTTACTGGATTCCG  81 98
NDY49_RS01295  255457 ..  255482 - -14.9  -3.16191   TTATATCTTTAGTAA         TACCCATAAGC TTCG GCTTATGGGTA          TTTTTATTTTTAAGT 100 313
NDY49_RS01265  250826 ..  250848 -  -3.4   -5.4505   TTCTTTAATAAAAAA           CGGTAAGTAT GTA AAACTTAGCG           ATTAAATTTAAAGCT  74 48
        dnaK  246180 ..  246190 -    -4  -4.32034   TCATTACGAGGAAAA                 TTAC ATA GTAA                 TTTGACAAAGCAATC  61 99
        dnaJ  245003 ..  245017 -  -5.8   -2.8978   ATTTCTATAGGAAAG               GTAAAT AAA ATTTAC               GACCACAGACTTTTC  56 22
NDY49_RS01235 NONE
        recN NONE
NDY49_RS01225  240510 ..  240523 -  -2.5  -2.93073   TCCTCGCAATAACGA               TTTAT TACT ATAAA                TACTTCCCTTCTAAA  42 19
NDY49_RS01220  237570 ..  237597 -  -5.7  -2.71011   AGTCGCTCGCAATGA        TGATTATTAGG CAATAC CCTAAGAATCA         TATTCCCAATGCTGT  54 23
NDY49_RS01215 NONE
        odhB  236206 ..  236233 -  -9.2  -2.80113   TATGATTTCATGAGA        TTGCCACGCAGCC TAC GGCTGC-TCGCAA        TGACAATTTTTTACA  74 36
NDY49_RS01205 NONE
NDY49_RS01200 NONE
NDY49_RS01195 NONE
NDY49_RS01190  233673 ..  233687 -  -2.1  -2.70932   GTTTTCTTTCAACCA               GCTAG TTAAT CTAAC               GATTGTATTGTTTAA  39 201
NDY49_RS01185  233105 ..  233119 -  -4.3  -5.50925   AAGGAAGAGAAAAAA               TTCTG ATTTA CAGAA               TTCTTTTATTATTTT  82 262
NDY49_RS01150 NONE
NDY49_RS01145  221375 ..  221402 -  -9.2  -2.80113   TATGATTTCATGAGA        TTGCCACGCAGCC TAC GGCTGC-TCGCAA        TGACGAAAAGGTAGA  74 42
NDY49_RS01135 NONE
NDY49_RS01130  219824 ..  219853 - -15.3  -3.61219   ACAAAACTTTCTAAA       GAGTAAGGTTATA GATC TATAACCTTACTC        TTTATTTATTTAATA 100 31
NDY49_RS01120  217590 ..  217609 -  -2.9  -3.97812   ATAATGAATATGAAA            GGC-GAAA GGTGA TTTCTGCC            TATAAATTTATTTTT  52 45
        rseP  214788 ..  214808 -  -8.3  -3.15458   AAATAATAAATTAGA            TACCGCG TTCAAGT CGCGGTA            TGACAAAGAACGGGA  70 153
        bamA  212317 ..  212348 -  -2.4   -5.5074   CAATCCAATAAAAAA      TTTAAAAATGCTAA AAGA CTAGCATCCTTAAT       TGGACCCCGTGGTCA  74 67
NDY49_RS01095  211848 ..  211877 -  -2.3  -2.65442   ACATGAGCTACATTA       CCA-CTTGTATTAT CAA ATATTACAAACTGG       TCATTTTTTATATCA  39 290
NDY49_RS01090 NONE
NDY49_RS01085  210488 ..  210520 -  -7.9  -3.26767   AATAGTTAATTAACA      CAAATAGCGAATTAT TAC ATAATCTGCTATTCG      GCTTAAGAAGTTGAA  69 365
NDY49_RS01075 NONE
NDY49_RS01070 NONE
        pyrH  207295 ..  207309 -  -4.3  -5.18357   CAATCTAGTAAAAAA               TTCTG ATCTA CAGAA               TTTTTTATTATTCTT  75 149
         frr  206469 ..  206489 -  -8.2  -2.87344   TATTGTTTTTATAGA            CCCTGTGG TCAAG CCACGGGG            TGACACAGTGGATTT  68 123
NDY49_RS01055 NONE
        gatC NONE
        gatA NONE
        gatB  202387 ..  202397 -    -4  -4.26076   TCATTGCGAGGAAAA                 TTAC GTA GTAA                 TTGACGAAGCAATCT  61 180
NDY49_RS01035 NONE
NDY49_RS01030  201082 ..  201092 -    -4   -3.4616   CAAAAAATCTTATAA                 TTTG CAG CAAA                 AAATAACCAAAATTA  52 38
        dapB  200108 ..  200120 -  -3.5  -3.29739   TTCAAGCTATATTAA                TTATA TTT TATAA                ATATCTTGCATTGAA  49 13
NDY49_RS01020  199192 ..  199209 -  -9.1  -2.91395   AGCCGTGCGACAAAG             CCCCTGC TTTT GCAGGGA              TATGACATCCAAGTC  75 140
NDY49_RS01015  196485 ..  196497 -  -7.7  -4.02334   TATGTAGAGGATAAA                GCTCT AAA AGAGC                TAAGTATTATGCTCT  76 355
NDY49_RS00990  190197 ..  190225 - -11.9  -5.64274   TTATTGACAAAAAAA        GCCTATAAAAACC CAA GTTTTTTATAGGC        TTTATCTTATTGCCC 100 59
NDY49_RS00885 NONE
NDY49_RS00880 NONE
NDY49_RS00875 NONE
NDY49_RS00870  162341 ..  162351 -  -3.2  -5.60993   CTCCCGACAAAAAAA                 CTGC TAT GCAA                 CAAAATATCACTAAT  82 99
NDY49_RS00830  155708 ..  155745 -  -4.1  -3.15503   CGTGAATACTCAATA   CGTCATTGCAA-GCAGCC GTA GGCTGCATGGCAATCTCA   TGAAATAATAACACA  49 95
NDY49_RS00745  130657 ..  130667 -  -3.2  -2.83271   TGAGTTTTATAAGCA                 GCTC CTA AAGC                 TAATCTTGCCATTAA  43 207
NDY49_RS00735  129567 ..  129582 -    -4  -2.74523   TTATTGGGAAGAGTA              TAGCTA GGTG CAGCTA               TTTTTGTCTTAGTAC  47 34
NDY49_RS00670  121625 ..  121637 -  -3.5  -3.50481   AAATGAAATCTACAA                TTATA TAT TATAA                TTTGTTTAGTATTGA  50 332
NDY49_RS00660  120334 ..  120361 -    -7  -2.80443   GGATATTTGACGAGA        TTGTCATGCAGCC TAT GGCTGCTCG-CAA        TGATGATTTGGTATC  60 52
NDY49_RS00655 NONE
        waaA  117922 ..  117932 -  -6.8  -3.62518   GCAAACATGCCTAAA                 GCAG ATC CTGC                 TTTTTTAAAGATACA  67 283
NDY49_RS00625  107214 ..  107246 - -13.7  -2.50935   AGTTTATTCATTAAG      CAAGGATAAGCTCTT AGG AAAAGCTTATCCTTA      TTTAAATTTTCTATT 100 47
NDY49_RS00585  102149 ..  102180 -  -5.9  -6.32976   AAAAAAATAAAAAAA      CTG-GATCCCGCGA TCAAG TCGCGGGATGACAA      ATACGCTTCAAGAAC 100 53
NDY49_RS00580 NONE
NDY49_RS00575   99852 ..   99865 -  -3.9  -4.15453   GAATCTAGCTTAAAA               TACTA TTAA TAGTA                TTTTAGATTTTTTTG  57 217
NDY49_RS00550   95243 ..   95287 -  -8.2  -5.95166   TTCAATTAAAAAAAA TATAATAATCAAGGCATA-AG CTTA CTCTAAGCCTTGATTATAATA GTGATGGCAATTAAT 100 51
NDY49_RS00525   87550 ..   87562 -  -2.7  -4.75309   CTAAATTTAAGAAAA                TCTCA AGC TGAAA                CATTAAAATAAAGTT  62 301
NDY49_RS00460   74430 ..   74440 -  -2.6  -4.62471   CTGAAGCTTTAAAAA                 TTTT AGA AAAA                 CACCTTGTTAATTAT  60 315
NDY49_RS00435   72381 ..   72398 -  -4.2  -4.58395   CTTATTGGGGAAAAA             CAATAG AAGATA CTATTG              AGATTTTGCAAGAAT  67 439
         lgt NONE
NDY49_RS00405   65847 ..   65867 -  -6.3  -3.43931   AATCAAATATACCAA            GAAATATTA AAA CAATATTTC            AGACAAACGAGAACA  63 418
NDY49_RS00365   57017 ..   57029 -  -6.3  -2.91199   TAATGCCTAATTAGA                TACCT TTA AGGTA                TTTAATTGATTATAC  59 4
        tsaD   55686 ..   55714 - -11.9  -2.87132   CCTCTTTTTTATATA        CATAATTGCCATG TTT CATGGTAATTATG        TATCATACTACTAAA  89 101
NDY49_RS00355   55062 ..   55107 - -14.1  -5.07567   GTATAGCTCAAAAAA CGCGTTTGATGTCATTCCTGC GGAA GCGGGAATGACACAAAACGAG CAATGCAACAAGACC 100 90
NDY49_RS00345 NONE
NDY49_RS00340   51777 ..   51791 -  -4.3  -2.96984   CAAAGTGACTATATA               CAATG CTCAT CATTG               AAATTTTGAAAATCT  48 4
NDY49_RS00335   51590 ..   51610 -  -3.4  -3.54424   GCCTACCGTTTTAAA           TTGTATCAG TATA CTGAT-CAA            CAAGCTTCCTCTCGC  50 0
NDY49_RS00330 NONE
NDY49_RS00325   50563 ..   50575 -  -4.1  -3.09635   AGTTTTAGCAGTTAA                TGCCA TTA TAGCA                GCAAGTGTTTCTTTT  49 90
NDY49_RS00315 NONE
NDY49_RS00310   48752 ..   48766 -  -5.7  -3.37796   CGGCATCATGCAGAA               CTGCT ATTAG AGCAG               TGGCAATAGAATTTA  57 152
NDY49_RS00300   48288 ..   48298 -    -4  -2.91924   CCATTTGCCATAAAT                 TGTA CTC TACA                 TTGCCGGGAGTAGTT  48 68
NDY49_RS00290   45852 ..   45870 -  -5.3   -3.8448   TAAGAGATTATCAAA             CGATACT CAAAT AGTACCG             GGACTACATGCTTCT  61 505
NDY49_RS00265 NONE
NDY49_RS00255 NONE
NDY49_RS00250   41379 ..   41392 -  -3.9  -3.37354   TATATTCATCTAGAA               TGATA TAAT TATCA                TCTCTAATCTTTAAT  49 180
NDY49_RS00245   40701 ..   40711 -  -2.6  -3.12803   TAGTTATACCTAATA                 TTTT GTT AAAA                 TTCTTAAAACTCTTT  43 268
NDY49_RS00240   40115 ..   40125 -  -2.6  -3.01791   ACCTTGGCTTGAATA                 TAAT TCA ATTA                 TTTCTGATGCTAATT  42 35
NDY49_RS00235 NONE
NDY49_RS00230 NONE
NDY49_RS00225   38470 ..   38502 -  -4.2  -3.12488   GAAATATAAATCATA      GTGTCTCCTTTCCT GAATA AGAAAAAGAAACGC      CGCCATGCACTCCTG  49 89
        folK   37425 ..   37435 -  -3.2  -3.91473   ATAAATTTTGATAAA                 CGGA TTT TCCA                 AAACCAATTCCAGGA  54 102
NDY49_RS00215   36468 ..   36478 -    -4  -3.21276   TCTTCTTCTATAAGA                 TTAC CAA GTAA                 TATTTGTCTAGCTTG  49 233
NDY49_RS00210   36015 ..   36038 -  -3.4  -3.17586   AGGAATGTAGGAAGA          TATT-TTTCAT TTT ATGAAAGAATA          ATAGTTAAATTATTG  45 35
        recF   34528 ..   34544 -  -2.4  -4.07124   TAGTATTTACATAAA              TTAAAA ATCAA TTTTAA              GCATTTTCAAAAGAT  52 423
NDY49_RS00195   32867 ..   32881 -  -2.1  -4.99435   CGCAATAACGAAAAA               GCTGA TCCAT TCAAC               AAAGCAGACTTGACA  63 53
NDY49_RS00190   32522 ..   32548 -  -4.4   -2.6183   AAAAATGTTGATAAT         GATCGTTCTTAC AGT GAAAGAACACTC         TACGAATCAGCTTTA  47 150
NDY49_RS00180   31059 ..   31073 -  -5.6  -3.31144   CCGTCATTGCGAGAA               GACGCC ATA GCCGTC               GACGAAGCAATCTCA  59 96
NDY49_RS00175 NONE
NDY49_RS00170 NONE
NDY49_RS00160   29615 ..   29625 -  -2.6  -3.83042   TTATTTAAAAATGAA                 TTTT AAG AAAA                 AATAAGTAACATAGC  50 17
NDY49_RS00155 NONE
NDY49_RS00150   28594 ..   28610 -  -3.8  -3.84961   GATGTAATGATGAAA              CAATTT TAAAT AAATTG              CTAGCTAGTGGTTAG  54 46
NDY49_RS00115   18463 ..   18477 -  -2.8  -3.57852   TAAATATAAAAGATA               TTGCCA TGA TTGCAA               GACCAAGCAAACGCC  48 120
NDY49_RS00110 NONE
NDY49_RS00105 NONE
NDY49_RS00100 NONE
        tsaE   14915 ..   14927 -  -4.9  -3.91716   GGATTTTTTAAATAA                GATAT TAA ATATC                TTTCTTATAGGAAAA  62 96
NDY49_RS00075   12464 ..   12474 -  -6.8  -3.31914   TTAAAGTAAGGAACA                 GTGG TGG CCAC                 GGTTGGAATTGAACC  64 16
NDY49_RS00070   11966 ..   11978 -  -2.7  -3.54307   AATATTTTCCTCAAA                CATTC TTG GAATA                AGCTCTATACAAACA  46 69
NDY49_RS00065   11676 ..   11686 -  -2.6  -3.14468   TTGTAGCATATGCAA                 TTTT AAA AAAA                 TTATCTAAACCATTG  43 41
NDY49_RS00060   11328 ..   11344 -  -3.1  -4.77165   TTTTGTATAACAAAA              TTTATAA GCA TCATAAA              AATTAAAGATGAAGG  64 178
        lpxD    7773 ..    7789 -    -3  -4.45077   TAAAAAGTACTAAAA              TCAGCA CTTTT TGCTAA              TTTTTTTGGATTGCC  60 113
        fabZ NONE
        lpxA    6404 ..    6424 -  -6.9  -2.82516   GTTGGCATCAGGATA            TTGTAACAC AAA GTGTTACAT            ATCGCTAGTTAAATA  60 44
NDY49_RS00030    5790 ..    5800 -    -4  -5.12707   GCAAAGTCTAAAAAA                 TGAA ATA TTCA                 GTGAAAATACAAAAA  73 302
