locus-tag class description RIV7116_RS00005 PF00308 Bacterial dnaA protein RIV7116_RS00005 PF08299 Bacterial dnaA protein helix-turn-helix RIV7116_RS00005 PF11638 DnaA N-terminal domain RIV7116_RS00015 PF02768 DNA polymerase III beta subunit, C-terminal domain RIV7116_RS00015 PF02767 DNA polymerase III beta subunit, central domain RIV7116_RS00015 PF00712 DNA polymerase III beta subunit, N-terminal domain RIV7116_RS00020 PF00360 Phytochrome region RIV7116_RS00020 PF00563 EAL domain RIV7116_RS00020 PF00990 Diguanylate cyclase, GGDEF domain RIV7116_RS00020 PF01590 GAF domain RIV7116_RS00025 PF02374 Anion-transporting ATPase RIV7116_RS00025 PF17886 HSP20-like domain found in ArsA RIV7116_RS00055 PF09382 RQC domain RIV7116_RS00055 PF16124 RecQ zinc-binding RIV7116_RS00055 PF00271 Helicase conserved C-terminal domain RIV7116_RS00055 PF00570 HRDC domain RIV7116_RS00055 PF00270 DEAD/DEAH box helicase RIV7116_RS00060 PF00437 Type II/IV secretion system protein RIV7116_RS00065 PF07689 KaiB domain RIV7116_RS00075 PF00682 HMGL-like RIV7116_RS00075 PF08502 LeuA allosteric (dimerisation) domain RIV7116_RS00080 PF00773 RNB domain RIV7116_RS00085 PF01084 Ribosomal protein S18 RIV7116_RS00095 PF14492 Elongation Factor G, domain II RIV7116_RS00095 PF00679 Elongation factor G C-terminus RIV7116_RS00095 PF03144 Elongation factor Tu domain 2 RIV7116_RS00095 PF00009 Elongation factor Tu GTP binding domain RIV7116_RS00105 PF00583 Acetyltransferase (GNAT) family RIV7116_RS00110 PF00440 Bacterial regulatory proteins, tetR family RIV7116_RS00115 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion RIV7116_RS00120 PF00873 AcrB/AcrD/AcrF family RIV7116_RS00125 PF03781 Sulfatase-modifying factor enzyme 1 RIV7116_RS00130 PF03781 Sulfatase-modifying factor enzyme 1 RIV7116_RS00155 PF03781 Sulfatase-modifying factor enzyme 1 RIV7116_RS00160 PF00989 PAS fold RIV7116_RS00160 PF00512 His Kinase A (phospho-acceptor) domain RIV7116_RS00160 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RIV7116_RS00160 PF16736 Single Cache-like RIV7116_RS00175 PF03552 Cellulose synthase RIV7116_RS00175 PF07238 PilZ domain RIV7116_RS00175 PF00535 Glycosyl transferase family 2 RIV7116_RS00175 PF03170 Bacterial cellulose synthase subunit RIV7116_RS00185 PF03193 RsgA GTPase RIV7116_RS00195 PF01596 O-methyltransferase RIV7116_RS00200 PF00581 Rhodanese-like domain RIV7116_RS00200 PF17773 UPF0176 acylphosphatase like domain RIV7116_RS00210 PF01435 Peptidase family M48 RIV7116_RS00235 PF08676 MutL C terminal dimerisation domain RIV7116_RS00235 PF01119 DNA mismatch repair protein, C-terminal domain RIV7116_RS00260 PF03819 MazG nucleotide pyrophosphohydrolase domain RIV7116_RS00285 PF00171 Aldehyde dehydrogenase family RIV7116_RS00290 PF00425 chorismate binding enzyme RIV7116_RS00300 PF01040 UbiA prenyltransferase family RIV7116_RS00305 PF13378 Enolase C-terminal domain-like RIV7116_RS00310 PF00501 AMP-binding enzyme RIV7116_RS00310 PF13193 AMP-binding enzyme C-terminal domain RIV7116_RS00320 PF03061 Thioesterase superfamily RIV7116_RS00365 PF01740 STAS domain RIV7116_RS00365 PF00916 Sulfate permease family RIV7116_RS00380 PF03793 PASTA domain RIV7116_RS00380 PF00069 Protein kinase domain RIV7116_RS00390 PF04055 Radical SAM superfamily RIV7116_RS00390 PF00919 Uncharacterized protein family UPF0004 RIV7116_RS00400 PF12849 PBP superfamily domain RIV7116_RS00405 PF13188 PAS domain RIV7116_RS00405 PF00072 Response regulator receiver domain RIV7116_RS00405 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RIV7116_RS00405 PF08448 PAS fold RIV7116_RS00405 PF00512 His Kinase A (phospho-acceptor) domain RIV7116_RS00415 PF00512 His Kinase A (phospho-acceptor) domain RIV7116_RS00415 PF00672 HAMP domain RIV7116_RS00415 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RIV7116_RS00425 PF00266 Aminotransferase class-V RIV7116_RS00430 PF03793 PASTA domain RIV7116_RS00430 PF00069 Protein kinase domain RIV7116_RS00440 PF00924 Mechanosensitive ion channel RIV7116_RS00440 PF12794 Mechanosensitive ion channel inner membrane domain 1 RIV7116_RS00440 PF12795 Mechanosensitive ion channel porin domain RIV7116_RS00450 PF00924 Mechanosensitive ion channel RIV7116_RS00455 PF00271 Helicase conserved C-terminal domain RIV7116_RS00455 PF08494 DEAD/H associated RIV7116_RS00455 PF00270 DEAD/DEAH box helicase RIV7116_RS00460 PF00732 GMC oxidoreductase RIV7116_RS00460 PF05199 GMC oxidoreductase RIV7116_RS00465 PF00149 Calcineurin-like phosphoesterase RIV7116_RS00465 PF10518 TAT (twin-arginine translocation) pathway signal sequence RIV7116_RS00475 PF10518 TAT (twin-arginine translocation) pathway signal sequence RIV7116_RS00475 PF00149 Calcineurin-like phosphoesterase RIV7116_RS00500 PF01594 AI-2E family transporter RIV7116_RS00505 PF00501 AMP-binding enzyme RIV7116_RS00505 PF01553 Acyltransferase RIV7116_RS00505 PF13193 AMP-binding enzyme C-terminal domain RIV7116_RS00510 PF00698 Acyl transferase domain RIV7116_RS00515 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III RIV7116_RS00515 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal RIV7116_RS00520 PF02504 Fatty acid synthesis protein RIV7116_RS00540 PF09334 tRNA synthetases class I (M) RIV7116_RS00540 PF00133 tRNA synthetases class I (I, L, M and V) RIV7116_RS00540 PF08264 Anticodon-binding domain of tRNA RIV7116_RS00560 PF00883 Cytosol aminopeptidase family, catalytic domain RIV7116_RS00560 PF02789 Cytosol aminopeptidase family, N-terminal domain RIV7116_RS00580 PF00488 MutS domain V RIV7116_RS00580 PF01713 Smr domain RIV7116_RS00585 PF00478 IMP dehydrogenase / GMP reductase domain RIV7116_RS00585 PF00571 CBS domain RIV7116_RS00590 PF00085 Thioredoxin RIV7116_RS00620 PF00482 Type II secretion system (T2SS), protein F RIV7116_RS00625 PF00437 Type II/IV secretion system protein RIV7116_RS00630 PF00437 Type II/IV secretion system protein RIV7116_RS00630 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain RIV7116_RS00635 PF01025 GrpE RIV7116_RS00640 PF00012 Hsp70 protein RIV7116_RS00645 PF01556 DnaJ C terminal domain RIV7116_RS00645 PF00684 DnaJ central domain RIV7116_RS00645 PF00226 DnaJ domain RIV7116_RS00650 PF01206 Sulfurtransferase TusA RIV7116_RS00650 PF00581 Rhodanese-like domain RIV7116_RS00655 PF03193 RsgA GTPase RIV7116_RS00660 PF09210 Domain of unknown function (DUF1957) RIV7116_RS00660 PF03065 Glycosyl hydrolase family 57 RIV7116_RS00675 PF01596 O-methyltransferase RIV7116_RS00680 PF01761 3-dehydroquinate synthase RIV7116_RS00685 PF16639 Apocytochrome F, N-terminal RIV7116_RS00685 PF01333 Apocytochrome F, C-terminal RIV7116_RS00690 PF00355 Rieske [2Fe-2S] domain RIV7116_RS00705 PF01588 Putative tRNA binding domain RIV7116_RS00710 PF00902 Sec-independent protein translocase protein (TatC) RIV7116_RS00725 PF00400 WD domain, G-beta repeat RIV7116_RS00725 PF12894 Anaphase-promoting complex subunit 4 WD40 domain RIV7116_RS00750 PF01494 FAD binding domain RIV7116_RS00760 PF01709 Transcriptional regulator RIV7116_RS00765 PF01547 Bacterial extracellular solute-binding protein RIV7116_RS00800 PF02954 Bacterial regulatory protein, Fis family RIV7116_RS00800 PF00072 Response regulator receiver domain RIV7116_RS00800 PF00158 Sigma-54 interaction domain RIV7116_RS00810 PF01255 Putative undecaprenyl diphosphate synthase RIV7116_RS00830 PF13193 AMP-binding enzyme C-terminal domain RIV7116_RS00830 PF00501 AMP-binding enzyme RIV7116_RS00830 PF16177 Acetyl-coenzyme A synthetase N-terminus RIV7116_RS00850 PF01047 MarR family RIV7116_RS00875 PF02096 60Kd inner membrane protein RIV7116_RS00885 PF00825 Ribonuclease P RIV7116_RS00895 PF01262 Alanine dehydrogenase/PNT, C-terminal domain RIV7116_RS00895 PF05222 Alanine dehydrogenase/PNT, N-terminal domain RIV7116_RS00900 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch RIV7116_RS00905 PF02233 NAD(P) transhydrogenase beta subunit RIV7116_RS00915 PF03742 PetN RIV7116_RS00975 PF17862 AAA+ lid domain RIV7116_RS00975 PF00004 ATPase family associated with various cellular activities (AAA) RIV7116_RS00975 PF06480 FtsH Extracellular RIV7116_RS00975 PF01434 Peptidase family M41 RIV7116_RS01010 PF01926 50S ribosome-binding GTPase RIV7116_RS01010 PF12631 MnmE helical domain RIV7116_RS01010 PF10396 GTP-binding protein TrmE N-terminus RIV7116_RS01025 PF00657 GDSL-like Lipase/Acylhydrolase RIV7116_RS01030 PF05343 M42 glutamyl aminopeptidase RIV7116_RS01035 PF00571 CBS domain RIV7116_RS01035 PF00478 IMP dehydrogenase / GMP reductase domain RIV7116_RS01050 PF01430 Hsp33 protein RIV7116_RS01060 PF01593 Flavin containing amine oxidoreductase RIV7116_RS01070 PF05193 Peptidase M16 inactive domain RIV7116_RS01070 PF00675 Insulinase (Peptidase family M16) RIV7116_RS01075 PF03881 Fructosamine kinase RIV7116_RS01110 PF01867 CRISPR associated protein Cas1 RIV7116_RS01110 PF01930 Domain of unknown function DUF83 RIV7116_RS01115 PF01867 CRISPR associated protein Cas1 RIV7116_RS01130 PF09827 CRISPR associated protein Cas2 RIV7116_RS01140 PF00072 Response regulator receiver domain RIV7116_RS01145 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) RIV7116_RS01145 PF00072 Response regulator receiver domain RIV7116_RS01145 PF01627 Hpt domain RIV7116_RS01145 PF00512 His Kinase A (phospho-acceptor) domain RIV7116_RS01145 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RIV7116_RS01145 PF00672 HAMP domain RIV7116_RS01150 PF00512 His Kinase A (phospho-acceptor) domain RIV7116_RS01150 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RIV7116_RS01155 PF00072 Response regulator receiver domain RIV7116_RS01155 PF00196 Bacterial regulatory proteins, luxR family RIV7116_RS01170 PF00107 Zinc-binding dehydrogenase RIV7116_RS01170 PF08240 Alcohol dehydrogenase GroES-like domain RIV7116_RS01175 PF13439 Glycosyltransferase Family 4 RIV7116_RS01180 PF13614 AAA domain RIV7116_RS01185 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family RIV7116_RS01205 PF02397 Bacterial sugar transferase RIV7116_RS01210 PF00534 Glycosyl transferases group 1 RIV7116_RS01210 PF13477 Glycosyl transferase 4-like RIV7116_RS01215 PF01370 NAD dependent epimerase/dehydratase family RIV7116_RS01220 PF13537 Glutamine amidotransferase domain RIV7116_RS01220 PF00733 Asparagine synthase RIV7116_RS01225 PF00534 Glycosyl transferases group 1 RIV7116_RS01240 PF00534 Glycosyl transferases group 1 RIV7116_RS01245 PF03023 Lipid II flippase MurJ RIV7116_RS01255 PF02719 Polysaccharide biosynthesis protein RIV7116_RS01265 PF10369 Small subunit of acetolactate synthase RIV7116_RS01270 PF03190 Protein of unknown function, DUF255 RIV7116_RS01275 PF00574 Clp protease RIV7116_RS01280 PF08448 PAS fold RIV7116_RS01280 PF01339 CheB methylesterase RIV7116_RS01280 PF01739 CheR methyltransferase, SAM binding domain RIV7116_RS01280 PF03705 CheR methyltransferase, all-alpha domain RIV7116_RS01285 PF03705 CheR methyltransferase, all-alpha domain RIV7116_RS01285 PF01739 CheR methyltransferase, SAM binding domain RIV7116_RS01285 PF01339 CheB methylesterase RIV7116_RS01285 PF08448 PAS fold RIV7116_RS01305 PF01040 UbiA prenyltransferase family RIV7116_RS01315 PF00116 Cytochrome C oxidase subunit II, periplasmic domain RIV7116_RS01315 PF02790 Cytochrome C oxidase subunit II, transmembrane domain RIV7116_RS01320 PF00115 Cytochrome C and Quinol oxidase polypeptide I RIV7116_RS01325 PF00510 Cytochrome c oxidase subunit III RIV7116_RS01345 PF00293 NUDIX domain RIV7116_RS01350 PF07689 KaiB domain RIV7116_RS01350 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RIV7116_RS01350 PF00512 His Kinase A (phospho-acceptor) domain RIV7116_RS01360 PF00069 Protein kinase domain RIV7116_RS01365 PF00069 Protein kinase domain RIV7116_RS01380 PF10502 Signal peptidase, peptidase S26 RIV7116_RS01400 PF00912 Transglycosylase RIV7116_RS01400 PF00905 Penicillin binding protein transpeptidase domain RIV7116_RS01405 PF00579 tRNA synthetases class I (W and Y) RIV7116_RS01410 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family RIV7116_RS01420 PF04480 Protein of unknown function (DUF559) RIV7116_RS01430 PF08446 PAS fold RIV7116_RS01430 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RIV7116_RS01430 PF00512 His Kinase A (phospho-acceptor) domain RIV7116_RS01430 PF01590 GAF domain RIV7116_RS01430 PF00360 Phytochrome region RIV7116_RS01435 PF01425 Amidase RIV7116_RS01450 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain RIV7116_RS01450 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain RIV7116_RS01460 PF00248 Aldo/keto reductase family RIV7116_RS01485 PF00069 Protein kinase domain RIV7116_RS01490 PF00069 Protein kinase domain RIV7116_RS01490 PF00400 WD domain, G-beta repeat RIV7116_RS01495 PF00069 Protein kinase domain RIV7116_RS01505 PF08323 Starch synthase catalytic domain RIV7116_RS01505 PF00534 Glycosyl transferases group 1 RIV7116_RS01540 PF08361 MAATS-type transcriptional repressor, C-terminal region RIV7116_RS01540 PF00440 Bacterial regulatory proteins, tetR family RIV7116_RS01545 PF00012 Hsp70 protein RIV7116_RS01555 PF03459 TOBE domain RIV7116_RS01555 PF00005 ABC transporter RIV7116_RS01580 PF00924 Mechanosensitive ion channel RIV7116_RS01585 PF09115 DNA polymerase III, delta subunit, C terminal RIV7116_RS01590 PF02223 Thymidylate kinase RIV7116_RS01595 PF00085 Thioredoxin RIV7116_RS01600 PF01022 Bacterial regulatory protein, arsR family RIV7116_RS01635 PF01638 HxlR-like helix-turn-helix RIV7116_RS01655 PF13419 Haloacid dehalogenase-like hydrolase RIV7116_RS01675 PF01081 KDPG and KHG aldolase RIV7116_RS01685 PF02562 PhoH-like protein RIV7116_RS01695 PF00886 Ribosomal protein S16 RIV7116_RS01700 PF02978 Signal peptide binding domain RIV7116_RS01700 PF00448 SRP54-type protein, GTPase domain RIV7116_RS01700 PF02881 SRP54-type protein, helical bundle domain RIV7116_RS01710 PF00557 Metallopeptidase family M24 RIV7116_RS01710 PF05195 Aminopeptidase P, N-terminal domain RIV7116_RS01720 PF02909 Tetracyclin repressor-like, C-terminal domain RIV7116_RS01720 PF00440 Bacterial regulatory proteins, tetR family RIV7116_RS01725 PF05193 Peptidase M16 inactive domain RIV7116_RS01725 PF00675 Insulinase (Peptidase family M16) RIV7116_RS01730 PF00675 Insulinase (Peptidase family M16) RIV7116_RS01730 PF05193 Peptidase M16 inactive domain RIV7116_RS01775 PF00005 ABC transporter RIV7116_RS01775 PF00664 ABC transporter transmembrane region RIV7116_RS01775 PF03412 Peptidase C39 family RIV7116_RS01785 PF09940 Domain of unknown function (DUF2172) RIV7116_RS01785 PF16221 winged helix-turn-helix RIV7116_RS01785 PF16254 Domain of unknown function (DUF4910) RIV7116_RS01790 PF00202 Aminotransferase class-III RIV7116_RS01795 PF02585 GlcNAc-PI de-N-acetylase RIV7116_RS01800 PF00483 Nucleotidyl transferase RIV7116_RS01805 PF08484 C-methyltransferase C-terminal domain RIV7116_RS01805 PF08421 Putative zinc binding domain RIV7116_RS01810 PF13181 Tetratricopeptide repeat RIV7116_RS01810 PF05420 Cellulose synthase operon protein C C-terminus (BCSC_C) RIV7116_RS01865 PF00664 ABC transporter transmembrane region RIV7116_RS01865 PF00005 ABC transporter RIV7116_RS01865 PF03412 Peptidase C39 family RIV7116_RS01885 PF00005 ABC transporter RIV7116_RS01885 PF00664 ABC transporter transmembrane region RIV7116_RS01885 PF03412 Peptidase C39 family RIV7116_RS01895 PF00815 Histidinol dehydrogenase RIV7116_RS01905 PF04542 Sigma-70 region 2 RIV7116_RS01905 PF00140 Sigma-70 factor, region 1.2 RIV7116_RS01905 PF04545 Sigma-70, region 4 RIV7116_RS01905 PF04539 Sigma-70 region 3 RIV7116_RS01910 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain RIV7116_RS01910 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain RIV7116_RS01910 PF02142 MGS-like domain RIV7116_RS01915 PF00210 Ferritin-like domain RIV7116_RS01930 PF17757 UvrB interaction domain RIV7116_RS01930 PF02151 UvrB/uvrC motif RIV7116_RS01930 PF12344 Ultra-violet resistance protein B RIV7116_RS01930 PF04851 Type III restriction enzyme, res subunit RIV7116_RS01930 PF00271 Helicase conserved C-terminal domain RIV7116_RS01940 PF00834 Ribulose-phosphate 3 epimerase family RIV7116_RS01945 PF00082 Subtilase family RIV7116_RS01985 PF01594 AI-2E family transporter RIV7116_RS01995 PF03816 Cell envelope-related transcriptional attenuator domain RIV7116_RS02000 PF12697 Alpha/beta hydrolase family RIV7116_RS02010 PF00696 Amino acid kinase family RIV7116_RS02015 PF01765 Ribosome recycling factor RIV7116_RS02020 PF07992 Pyridine nucleotide-disulphide oxidoreductase RIV7116_RS02035 PF13085 2Fe-2S iron-sulfur cluster binding domain RIV7116_RS02045 PF00291 Pyridoxal-phosphate dependent enzyme RIV7116_RS02055 PF18030 RimK PreATP-grasp domain RIV7116_RS02055 PF08443 RimK-like ATP-grasp domain RIV7116_RS02080 PF01039 Carboxyl transferase domain RIV7116_RS02080 PF17848 Acetyl-coA carboxylase zinc finger domain RIV7116_RS02085 PF06750 Bacterial Peptidase A24 N-terminal domain RIV7116_RS02085 PF01478 Type IV leader peptidase family RIV7116_RS02095 PF00180 Isocitrate/isopropylmalate dehydrogenase RIV7116_RS02100 PF13732 Domain of unknown function (DUF4162) RIV7116_RS02100 PF00005 ABC transporter RIV7116_RS02115 PF00005 ABC transporter RIV7116_RS02115 PF13732 Domain of unknown function (DUF4162) RIV7116_RS02125 PF02629 CoA binding domain RIV7116_RS02125 PF00549 CoA-ligase RIV7116_RS02130 PF00549 CoA-ligase RIV7116_RS02130 PF08442 ATP-grasp domain RIV7116_RS02150 PF00676 Dehydrogenase E1 component RIV7116_RS02165 PF01116 Fructose-bisphosphate aldolase class-II RIV7116_RS02175 PF00795 Carbon-nitrogen hydrolase RIV7116_RS02185 PF00005 ABC transporter RIV7116_RS02190 PF13614 AAA domain RIV7116_RS02200 PF00664 ABC transporter transmembrane region RIV7116_RS02200 PF00005 ABC transporter RIV7116_RS02210 PF02397 Bacterial sugar transferase RIV7116_RS02230 PF00535 Glycosyl transferase family 2 RIV7116_RS02245 PF13614 AAA domain RIV7116_RS02275 PF00733 Asparagine synthase RIV7116_RS02275 PF13537 Glutamine amidotransferase domain RIV7116_RS02290 PF00005 ABC transporter RIV7116_RS02310 PF03600 Citrate transporter RIV7116_RS02310 PF02080 TrkA-C domain RIV7116_RS02320 PF14306 PUA-like domain RIV7116_RS02320 PF01747 ATP-sulfurylase RIV7116_RS02325 PF00535 Glycosyl transferase family 2 RIV7116_RS02350 PF00534 Glycosyl transferases group 1 RIV7116_RS02350 PF13439 Glycosyltransferase Family 4 RIV7116_RS02360 PF04230 Polysaccharide pyruvyl transferase RIV7116_RS02370 PF03808 Glycosyl transferase WecB/TagA/CpsF family RIV7116_RS02385 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) RIV7116_RS02395 PF08032 RNA 2'-O ribose methyltransferase substrate binding RIV7116_RS02395 PF00588 SpoU rRNA Methylase family RIV7116_RS02405 PF00899 ThiF family RIV7116_RS02425 PF13460 NAD(P)H-binding RIV7116_RS02430 PF00069 Protein kinase domain RIV7116_RS02430 PF00805 Pentapeptide repeats (8 copies) RIV7116_RS02465 PF07726 ATPase family associated with various cellular activities (AAA) RIV7116_RS02465 PF17863 AAA lid domain RIV7116_RS02470 PF01687 Riboflavin kinase RIV7116_RS02470 PF06574 FAD synthetase RIV7116_RS02475 PF00753 Metallo-beta-lactamase superfamily RIV7116_RS02475 PF12706 Beta-lactamase superfamily domain RIV7116_RS02480 PF01975 Survival protein SurE RIV7116_RS02485 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain RIV7116_RS02485 PF01409 tRNA synthetases class II core domain (F) RIV7116_RS02490 PF00270 DEAD/DEAH box helicase RIV7116_RS02490 PF16124 RecQ zinc-binding RIV7116_RS02490 PF00271 Helicase conserved C-terminal domain RIV7116_RS02520 PF13282 Domain of unknown function (DUF4070) RIV7116_RS02520 PF02310 B12 binding domain RIV7116_RS02520 PF04055 Radical SAM superfamily RIV7116_RS02525 PF00069 Protein kinase domain RIV7116_RS02525 PF03793 PASTA domain RIV7116_RS02530 PF03793 PASTA domain RIV7116_RS02530 PF00069 Protein kinase domain RIV7116_RS02535 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RIV7116_RS02535 PF00512 His Kinase A (phospho-acceptor) domain RIV7116_RS02535 PF18415 Histidine kinase receptor ArcB trans-membrane domain RIV7116_RS02535 PF01627 Hpt domain RIV7116_RS02535 PF00989 PAS fold RIV7116_RS02535 PF00072 Response regulator receiver domain RIV7116_RS02540 PF00155 Aminotransferase class I and II RIV7116_RS02540 PF00392 Bacterial regulatory proteins, gntR family RIV7116_RS02545 PF12146 Serine aminopeptidase, S33 RIV7116_RS02550 PF00535 Glycosyl transferase family 2 RIV7116_RS02555 PF00682 HMGL-like RIV7116_RS02555 PF08502 LeuA allosteric (dimerisation) domain RIV7116_RS02565 PF00805 Pentapeptide repeats (8 copies) RIV7116_RS02565 PF00069 Protein kinase domain RIV7116_RS02580 PF00581 Rhodanese-like domain RIV7116_RS02585 PF01266 FAD dependent oxidoreductase RIV7116_RS02585 PF05430 S-adenosyl-L-methionine-dependent methyltransferase RIV7116_RS02590 PF00072 Response regulator receiver domain RIV7116_RS02595 PF00132 Bacterial transferase hexapeptide (six repeats) RIV7116_RS02595 PF12804 MobA-like NTP transferase domain RIV7116_RS02600 PF01112 Asparaginase RIV7116_RS02610 PF01180 Dihydroorotate dehydrogenase RIV7116_RS02620 PF05731 TROVE domain RIV7116_RS02625 PF13419 Haloacid dehalogenase-like hydrolase RIV7116_RS02640 PF12804 MobA-like NTP transferase domain RIV7116_RS02650 PF00384 Molybdopterin oxidoreductase RIV7116_RS02650 PF04879 Molybdopterin oxidoreductase Fe4S4 domain RIV7116_RS02650 PF01568 Molydopterin dinucleotide binding domain RIV7116_RS02655 PF07690 Major Facilitator Superfamily RIV7116_RS02660 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain RIV7116_RS02660 PF01077 Nitrite and sulphite reductase 4Fe-4S domain RIV7116_RS02670 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain RIV7116_RS02670 PF02769 AIR synthase related protein, C-terminal domain RIV7116_RS02670 PF00586 AIR synthase related protein, N-terminal domain RIV7116_RS02675 PF00156 Phosphoribosyl transferase domain RIV7116_RS02675 PF13537 Glutamine amidotransferase domain RIV7116_RS02685 PF00528 Binding-protein-dependent transport system inner membrane component RIV7116_RS02690 PF00156 Phosphoribosyl transferase domain RIV7116_RS02705 PF17092 Penicillin-binding protein OB-like domain RIV7116_RS02705 PF00912 Transglycosylase RIV7116_RS02705 PF00905 Penicillin binding protein transpeptidase domain RIV7116_RS02720 PF01252 Signal peptidase (SPase) II RIV7116_RS02725 PF02632 BioY family RIV7116_RS02730 PF12849 PBP superfamily domain RIV7116_RS02735 PF00528 Binding-protein-dependent transport system inner membrane component RIV7116_RS02740 PF00528 Binding-protein-dependent transport system inner membrane component RIV7116_RS02745 PF00005 ABC transporter RIV7116_RS02760 PF13426 PAS domain RIV7116_RS02760 PF08448 PAS fold RIV7116_RS02760 PF00512 His Kinase A (phospho-acceptor) domain RIV7116_RS02760 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RIV7116_RS02760 PF00072 Response regulator receiver domain RIV7116_RS02765 PF00583 Acetyltransferase (GNAT) family RIV7116_RS02775 PF00155 Aminotransferase class I and II RIV7116_RS02785 PF07992 Pyridine nucleotide-disulphide oxidoreductase RIV7116_RS02785 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain RIV7116_RS02790 PF07992 Pyridine nucleotide-disulphide oxidoreductase RIV7116_RS02790 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain RIV7116_RS02795 PF00502 Phycobilisome protein RIV7116_RS02800 PF01938 TRAM domain RIV7116_RS02800 PF13847 Methyltransferase domain RIV7116_RS02820 PF00152 tRNA synthetases class II (D, K and N) RIV7116_RS02820 PF01336 OB-fold nucleic acid binding domain RIV7116_RS02835 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase RIV7116_RS02840 PF04389 Peptidase family M28 RIV7116_RS02875 PF00486 Transcriptional regulatory protein, C terminal RIV7116_RS02875 PF03704 Bacterial transcriptional activator domain RIV7116_RS02875 PF00931 NB-ARC domain RIV7116_RS02890 PF00528 Binding-protein-dependent transport system inner membrane component RIV7116_RS02895 PF00528 Binding-protein-dependent transport system inner membrane component RIV7116_RS02900 PF00072 Response regulator receiver domain RIV7116_RS02900 PF00486 Transcriptional regulatory protein, C terminal RIV7116_RS02905 PF00166 Chaperonin 10 Kd subunit RIV7116_RS02910 PF00118 TCP-1/cpn60 chaperonin family RIV7116_RS02940 PF00873 AcrB/AcrD/AcrF family RIV7116_RS02950 PF09308 LuxQ, periplasmic RIV7116_RS02950 PF00512 His Kinase A (phospho-acceptor) domain RIV7116_RS02950 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RIV7116_RS02950 PF00072 Response regulator receiver domain RIV7116_RS02955 PF00072 Response regulator receiver domain RIV7116_RS02970 PF00583 Acetyltransferase (GNAT) family RIV7116_RS02975 PF07739 TipAS antibiotic-recognition domain RIV7116_RS02975 PF13411 MerR HTH family regulatory protein RIV7116_RS02990 PF00067 Cytochrome P450 RIV7116_RS03000 PF08241 Methyltransferase domain RIV7116_RS03010 PF01774 UreD urease accessory protein RIV7116_RS03015 PF00547 Urease, gamma subunit RIV7116_RS03020 PF00699 Urease beta subunit RIV7116_RS03030 PF01230 HIT domain RIV7116_RS03045 PF01979 Amidohydrolase family RIV7116_RS03045 PF00449 Urease alpha-subunit, N-terminal domain RIV7116_RS03055 PF00072 Response regulator receiver domain RIV7116_RS03055 PF00990 Diguanylate cyclase, GGDEF domain RIV7116_RS03060 PF00171 Aldehyde dehydrogenase family RIV7116_RS03065 PF00174 Oxidoreductase molybdopterin binding domain RIV7116_RS03070 PF01783 Ribosomal L32p protein family RIV7116_RS03090 PF17770 Ribonuclease J C-terminal domain RIV7116_RS03090 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain RIV7116_RS03090 PF00753 Metallo-beta-lactamase superfamily RIV7116_RS03095 PF00701 Dihydrodipicolinate synthetase family RIV7116_RS03100 PF01118 Semialdehyde dehydrogenase, NAD binding domain RIV7116_RS03100 PF02774 Semialdehyde dehydrogenase, dimerisation domain RIV7116_RS03105 PF05698 Bacterial trigger factor protein (TF) C-terminus RIV7116_RS03105 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase RIV7116_RS03105 PF05697 Bacterial trigger factor protein (TF) RIV7116_RS03110 PF00574 Clp protease RIV7116_RS03115 PF10431 C-terminal, D2-small domain, of ClpB protein RIV7116_RS03115 PF06689 ClpX C4-type zinc finger RIV7116_RS03115 PF07724 AAA domain (Cdc48 subfamily) RIV7116_RS03120 PF00561 alpha/beta hydrolase fold RIV7116_RS03125 PF00392 Bacterial regulatory proteins, gntR family RIV7116_RS03130 PF01738 Dienelactone hydrolase family RIV7116_RS03135 PF00575 S1 RNA binding domain RIV7116_RS03165 PF02445 Quinolinate synthetase A protein RIV7116_RS03190 PF07444 Ycf66 protein N-terminus RIV7116_RS03200 PF02785 Biotin carboxylase C-terminal domain RIV7116_RS03200 PF00289 Biotin carboxylase, N-terminal domain RIV7116_RS03200 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain RIV7116_RS03220 PF01578 Cytochrome C assembly protein RIV7116_RS03240 PF01266 FAD dependent oxidoreductase RIV7116_RS03260 PF08241 Methyltransferase domain RIV7116_RS03275 PF00842 Alanine racemase, C-terminal domain RIV7116_RS03275 PF01168 Alanine racemase, N-terminal domain RIV7116_RS03290 PF00072 Response regulator receiver domain RIV7116_RS03290 PF12452 Protein of unknown function (DUF3685) RIV7116_RS03295 PF07992 Pyridine nucleotide-disulphide oxidoreductase RIV7116_RS03295 PF00403 Heavy-metal-associated domain RIV7116_RS03295 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain RIV7116_RS03300 PF00155 Aminotransferase class I and II RIV7116_RS03305 PF00216 Bacterial DNA-binding protein RIV7116_RS03310 PF00263 Bacterial type II and III secretion system protein RIV7116_RS03310 PF03958 Bacterial type II/III secretion system short domain RIV7116_RS03330 PF02875 Mur ligase family, glutamate ligase domain RIV7116_RS03330 PF08245 Mur ligase middle domain RIV7116_RS03335 PF06298 Photosystem II protein Y (PsbY) RIV7116_RS03355 PF00675 Insulinase (Peptidase family M16) RIV7116_RS03355 PF05193 Peptidase M16 inactive domain RIV7116_RS03360 PF00557 Metallopeptidase family M24 RIV7116_RS03365 PF03167 Uracil DNA glycosylase superfamily RIV7116_RS03370 PF05139 Erythromycin esterase RIV7116_RS03370 PF00156 Phosphoribosyl transferase domain RIV7116_RS03400 PF00873 AcrB/AcrD/AcrF family RIV7116_RS03410 PF02678 Pirin RIV7116_RS03410 PF17954 Quercetinase C-terminal cupin domain RIV7116_RS03415 PF00210 Ferritin-like domain RIV7116_RS03430 PF00155 Aminotransferase class I and II RIV7116_RS03445 PF00069 Protein kinase domain RIV7116_RS03450 PF00069 Protein kinase domain RIV7116_RS03465 PF01649 Ribosomal protein S20 RIV7116_RS03470 PF01026 TatD related DNase RIV7116_RS03480 PF04563 RNA polymerase beta subunit RIV7116_RS03480 PF04561 RNA polymerase Rpb2, domain 2 RIV7116_RS03480 PF10385 RNA polymerase beta subunit external 1 domain RIV7116_RS03480 PF00562 RNA polymerase Rpb2, domain 6 RIV7116_RS03480 PF04560 RNA polymerase Rpb2, domain 7 RIV7116_RS03480 PF04565 RNA polymerase Rpb2, domain 3 RIV7116_RS03485 PF04997 RNA polymerase Rpb1, domain 1 RIV7116_RS03485 PF04983 RNA polymerase Rpb1, domain 3 RIV7116_RS03485 PF00623 RNA polymerase Rpb1, domain 2 RIV7116_RS03490 PF05000 RNA polymerase Rpb1, domain 4 RIV7116_RS03490 PF04998 RNA polymerase Rpb1, domain 5 RIV7116_RS03490 PF04983 RNA polymerase Rpb1, domain 3 RIV7116_RS03495 PF00150 Cellulase (glycosyl hydrolase family 5) RIV7116_RS03530 PF01270 Glycosyl hydrolases family 8 RIV7116_RS03535 PF03170 Bacterial cellulose synthase subunit RIV7116_RS03540 PF07238 PilZ domain RIV7116_RS03540 PF03552 Cellulose synthase RIV7116_RS03540 PF00535 Glycosyl transferase family 2 RIV7116_RS03550 PF11805 Protein of unknown function (DUF3326) RIV7116_RS03565 PF00111 2Fe-2S iron-sulfur cluster binding domain RIV7116_RS03570 PF11791 Aconitate B N-terminal domain RIV7116_RS03570 PF06434 Aconitate hydratase 2 N-terminus RIV7116_RS03570 PF00330 Aconitase family (aconitate hydratase) RIV7116_RS03575 PF01042 Endoribonuclease L-PSP RIV7116_RS03580 PF12833 Helix-turn-helix domain RIV7116_RS03605 PF00563 EAL domain RIV7116_RS03605 PF03707 Bacterial signalling protein N terminal repeat RIV7116_RS03605 PF00990 Diguanylate cyclase, GGDEF domain RIV7116_RS03610 PF09456 RcsC Alpha-Beta-Loop (ABL) RIV7116_RS03610 PF00072 Response regulator receiver domain RIV7116_RS03610 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RIV7116_RS03610 PF00512 His Kinase A (phospho-acceptor) domain RIV7116_RS03615 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD RIV7116_RS03620 PF01668 SmpB protein RIV7116_RS03635 PF00586 AIR synthase related protein, N-terminal domain RIV7116_RS03635 PF02769 AIR synthase related protein, C-terminal domain RIV7116_RS03640 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain RIV7116_RS03640 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain RIV7116_RS03645 PF02875 Mur ligase family, glutamate ligase domain RIV7116_RS03645 PF08245 Mur ligase middle domain RIV7116_RS03645 PF01225 Mur ligase family, catalytic domain RIV7116_RS03650 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain RIV7116_RS03650 PF01565 FAD binding domain RIV7116_RS03655 PF02575 YbaB/EbfC DNA-binding family RIV7116_RS03660 PF01451 Low molecular weight phosphotyrosine protein phosphatase RIV7116_RS03680 PF02706 Chain length determinant protein RIV7116_RS03680 PF13807 G-rich domain on putative tyrosine kinase RIV7116_RS03680 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain RIV7116_RS03700 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family RIV7116_RS03705 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RIV7116_RS03705 PF00512 His Kinase A (phospho-acceptor) domain RIV7116_RS03705 PF00072 Response regulator receiver domain RIV7116_RS03705 PF01627 Hpt domain RIV7116_RS03715 PF00072 Response regulator receiver domain RIV7116_RS03715 PF00486 Transcriptional regulatory protein, C terminal RIV7116_RS03720 PF00355 Rieske [2Fe-2S] domain RIV7116_RS03725 PF03653 Uncharacterised protein family (UPF0093) RIV7116_RS03740 PF00005 ABC transporter RIV7116_RS03745 PF00497 Bacterial extracellular solute-binding proteins, family 3 RIV7116_RS03750 PF01471 Putative peptidoglycan binding domain RIV7116_RS03750 PF07486 Cell Wall Hydrolase RIV7116_RS03755 PF03167 Uracil DNA glycosylase superfamily RIV7116_RS03760 PF09179 TilS substrate binding domain RIV7116_RS03760 PF01171 PP-loop family RIV7116_RS03770 PF00072 Response regulator receiver domain RIV7116_RS03770 PF14332 Domain of unknown function (DUF4388) RIV7116_RS03775 PF00486 Transcriptional regulatory protein, C terminal RIV7116_RS03775 PF00072 Response regulator receiver domain RIV7116_RS03785 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term RIV7116_RS03785 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain RIV7116_RS03790 PF01627 Hpt domain RIV7116_RS03790 PF01584 CheW-like domain RIV7116_RS03790 PF01627 Hpt domain RIV7116_RS03790 PF02895 Signal transducing histidine kinase, homodimeric domain RIV7116_RS03790 PF00072 Response regulator receiver domain RIV7116_RS03790 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RIV7116_RS03790 PF02895 Signal transducing histidine kinase, homodimeric domain RIV7116_RS03790 PF01584 CheW-like domain RIV7116_RS03790 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RIV7116_RS03790 PF00072 Response regulator receiver domain RIV7116_RS03795 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain RIV7116_RS03795 PF00326 Prolyl oligopeptidase family RIV7116_RS03810 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase RIV7116_RS03815 PF08275 DNA primase catalytic core, N-terminal domain RIV7116_RS03815 PF01807 CHC2 zinc finger RIV7116_RS03825 PF02021 Uncharacterised protein family UPF0102 RIV7116_RS03835 PF02547 Queuosine biosynthesis protein RIV7116_RS03850 PF00990 Diguanylate cyclase, GGDEF domain RIV7116_RS03850 PF00563 EAL domain RIV7116_RS03850 PF01590 GAF domain RIV7116_RS03850 PF00360 Phytochrome region RIV7116_RS03855 PF01042 Endoribonuclease L-PSP RIV7116_RS03865 PF02446 4-alpha-glucanotransferase RIV7116_RS03875 PF01479 S4 domain RIV7116_RS03875 PF00849 RNA pseudouridylate synthase RIV7116_RS03890 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases RIV7116_RS03895 PF00069 Protein kinase domain RIV7116_RS03905 PF02416 mttA/Hcf106 family RIV7116_RS03910 PF08245 Mur ligase middle domain RIV7116_RS03910 PF02875 Mur ligase family, glutamate ligase domain RIV7116_RS03910 PF08443 RimK-like ATP-grasp domain RIV7116_RS03915 PF03575 Peptidase family S51 RIV7116_RS03920 PF01746 tRNA (Guanine-1)-methyltransferase RIV7116_RS03925 PF02542 YgbB family RIV7116_RS03930 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle RIV7116_RS03935 PF00731 AIR carboxylase RIV7116_RS03945 PF00206 Lyase RIV7116_RS03945 PF14698 Argininosuccinate lyase C-terminal RIV7116_RS03955 PF00293 NUDIX domain RIV7116_RS03955 PF13344 Haloacid dehalogenase-like hydrolase RIV7116_RS03960 PF12697 Alpha/beta hydrolase family RIV7116_RS03965 PF03309 Type III pantothenate kinase RIV7116_RS03985 PF12323 Helix-turn-helix domain RIV7116_RS03985 PF01385 Probable transposase RIV7116_RS03985 PF07282 Putative transposase DNA-binding domain RIV7116_RS03995 PF00753 Metallo-beta-lactamase superfamily RIV7116_RS03995 PF01613 Flavin reductase like domain RIV7116_RS04000 PF00258 Flavodoxin RIV7116_RS04000 PF01613 Flavin reductase like domain RIV7116_RS04020 PF02311 AraC-like ligand binding domain RIV7116_RS04020 PF12833 Helix-turn-helix domain RIV7116_RS04030 PF09367 CpeS-like protein RIV7116_RS04035 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion RIV7116_RS04040 PF00873 AcrB/AcrD/AcrF family RIV7116_RS04045 PF00534 Glycosyl transferases group 1 RIV7116_RS04045 PF13439 Glycosyltransferase Family 4 RIV7116_RS04050 PF00535 Glycosyl transferase family 2 RIV7116_RS04050 PF18674 TarS beta-glycosyltransferase C-terminal domain 1 RIV7116_RS04055 PF01245 Ribosomal protein L19 RIV7116_RS04070 PF00584 SecE/Sec61-gamma subunits of protein translocation complex RIV7116_RS04075 PF00467 KOW motif RIV7116_RS04075 PF02357 Transcription termination factor nusG RIV7116_RS04080 PF00298 Ribosomal protein L11, RNA binding domain RIV7116_RS04080 PF03946 Ribosomal protein L11, N-terminal domain RIV7116_RS04085 PF00687 Ribosomal protein L1p/L10e family RIV7116_RS04090 PF00466 Ribosomal protein L10 RIV7116_RS04095 PF00542 Ribosomal protein L7/L12 C-terminal domain RIV7116_RS04095 PF16320 Ribosomal protein L7/L12 dimerisation domain RIV7116_RS04100 PF00069 Protein kinase domain RIV7116_RS04115 PF10431 C-terminal, D2-small domain, of ClpB protein RIV7116_RS04115 PF00004 ATPase family associated with various cellular activities (AAA) RIV7116_RS04115 PF07724 AAA domain (Cdc48 subfamily) RIV7116_RS04115 PF17871 AAA lid domain RIV7116_RS04115 PF02861 Clp amino terminal domain, pathogenicity island component RIV7116_RS04120 PF00583 Acetyltransferase (GNAT) family RIV7116_RS04125 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain RIV7116_RS04125 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain RIV7116_RS04130 PF02457 DisA bacterial checkpoint controller nucleotide-binding RIV7116_RS04135 PF01255 Putative undecaprenyl diphosphate synthase RIV7116_RS04145 PF01556 DnaJ C terminal domain RIV7116_RS04145 PF00684 DnaJ central domain RIV7116_RS04145 PF00226 DnaJ domain RIV7116_RS04150 PF00226 DnaJ domain RIV7116_RS04150 PF01556 DnaJ C terminal domain RIV7116_RS04155 PF00012 Hsp70 protein RIV7116_RS04160 PF04389 Peptidase family M28 RIV7116_RS04165 PF00501 AMP-binding enzyme RIV7116_RS04175 PF00486 Transcriptional regulatory protein, C terminal RIV7116_RS04175 PF00072 Response regulator receiver domain RIV7116_RS04180 PF03572 Peptidase family S41 RIV7116_RS04180 PF01471 Putative peptidoglycan binding domain RIV7116_RS04180 PF17820 PDZ domain RIV7116_RS04190 PF01593 Flavin containing amine oxidoreductase RIV7116_RS04210 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain RIV7116_RS04210 PF01077 Nitrite and sulphite reductase 4Fe-4S domain RIV7116_RS04245 PF04452 RNA methyltransferase RIV7116_RS04290 PF00958 GMP synthase C terminal domain RIV7116_RS04290 PF00117 Glutamine amidotransferase class-I RIV7116_RS04290 PF03352 Methyladenine glycosylase RIV7116_RS04290 PF13673 Acetyltransferase (GNAT) domain RIV7116_RS04290 PF13302 Acetyltransferase (GNAT) domain RIV7116_RS04305 PF00005 ABC transporter RIV7116_RS04305 PF00664 ABC transporter transmembrane region RIV7116_RS04310 PF05860 haemagglutination activity domain RIV7116_RS04335 PF00933 Glycosyl hydrolase family 3 N terminal domain RIV7116_RS04335 PF01915 Glycosyl hydrolase family 3 C-terminal domain RIV7116_RS04340 PF13847 Methyltransferase domain RIV7116_RS04365 PF00107 Zinc-binding dehydrogenase RIV7116_RS04365 PF08240 Alcohol dehydrogenase GroES-like domain RIV7116_RS04375 PF01661 Macro domain RIV7116_RS04405 PF00188 Cysteine-rich secretory protein family RIV7116_RS04410 PF05922 Peptidase inhibitor I9 RIV7116_RS04410 PF00082 Subtilase family RIV7116_RS04425 PF01940 Integral membrane protein DUF92 RIV7116_RS04450 PF00072 Response regulator receiver domain RIV7116_RS04450 PF00486 Transcriptional regulatory protein, C terminal RIV7116_RS04455 PF00512 His Kinase A (phospho-acceptor) domain RIV7116_RS04455 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RIV7116_RS04465 PF01242 6-pyruvoyl tetrahydropterin synthase RIV7116_RS04480 PF08502 LeuA allosteric (dimerisation) domain RIV7116_RS04480 PF00682 HMGL-like RIV7116_RS04490 PF07690 Major Facilitator Superfamily RIV7116_RS04495 PF07007 Lysozyme inhibitor LprI RIV7116_RS04505 PF03741 Integral membrane protein TerC family RIV7116_RS04510 PF00334 Nucleoside diphosphate kinase RIV7116_RS04515 PF17944 Arginine decarboxylase C-terminal helical extension RIV7116_RS04515 PF17810 Arginine decarboxylase helical bundle domain RIV7116_RS04515 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain RIV7116_RS04520 PF00483 Nucleotidyl transferase RIV7116_RS04535 PF01594 AI-2E family transporter RIV7116_RS04540 PF01243 Pyridoxamine 5'-phosphate oxidase RIV7116_RS04540 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region RIV7116_RS04570 PF00696 Amino acid kinase family RIV7116_RS04575 PF01202 Shikimate kinase RIV7116_RS04580 PF00400 WD domain, G-beta repeat RIV7116_RS04580 PF00931 NB-ARC domain RIV7116_RS04595 PF02441 Flavoprotein RIV7116_RS04600 PF00773 RNB domain RIV7116_RS04600 PF17876 Cold shock domain RIV7116_RS04600 PF08206 Ribonuclease B OB domain RIV7116_RS04600 PF00575 S1 RNA binding domain RIV7116_RS04610 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit RIV7116_RS04615 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit RIV7116_RS04620 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 RIV7116_RS04625 PF00301 Rubredoxin RIV7116_RS04630 PF14870 Photosynthesis system II assembly factor YCF48 RIV7116_RS04635 PF00284 Lumenal portion of Cytochrome b559, alpha (gene psbE) subunit RIV7116_RS04635 PF00283 Cytochrome b559, alpha (gene psbE) and beta (gene psbF)subunits RIV7116_RS04640 PF01788 PsbJ RIV7116_RS04665 PF04539 Sigma-70 region 3 RIV7116_RS04665 PF04545 Sigma-70, region 4 RIV7116_RS04665 PF04542 Sigma-70 region 2 RIV7116_RS04670 PF01716 Manganese-stabilising protein / photosystem II polypeptide RIV7116_RS04695 PF00091 Tubulin/FtsZ family, GTPase domain RIV7116_RS04695 PF12327 FtsZ family, C-terminal domain RIV7116_RS04700 PF02951 Prokaryotic glutathione synthetase, N-terminal domain RIV7116_RS04700 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain RIV7116_RS04705 PF00462 Glutaredoxin RIV7116_RS04710 PF01926 50S ribosome-binding GTPase RIV7116_RS04710 PF13167 GTP-binding GTPase N-terminal RIV7116_RS04710 PF16360 GTP-binding GTPase Middle Region RIV7116_RS04715 PF00072 Response regulator receiver domain RIV7116_RS04715 PF01627 Hpt domain RIV7116_RS04715 PF00486 Transcriptional regulatory protein, C terminal RIV7116_RS04720 PF00072 Response regulator receiver domain RIV7116_RS04720 PF00486 Transcriptional regulatory protein, C terminal RIV7116_RS04740 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) RIV7116_RS04740 PF00072 Response regulator receiver domain RIV7116_RS04740 PF01627 Hpt domain RIV7116_RS04740 PF00512 His Kinase A (phospho-acceptor) domain RIV7116_RS04740 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RIV7116_RS04740 PF00672 HAMP domain RIV7116_RS04750 PF04055 Radical SAM superfamily RIV7116_RS04770 PF00124 Photosynthetic reaction centre protein RIV7116_RS04775 PF01048 Phosphorylase superfamily RIV7116_RS04790 PF01747 ATP-sulfurylase RIV7116_RS04790 PF14306 PUA-like domain RIV7116_RS04800 PF00486 Transcriptional regulatory protein, C terminal RIV7116_RS04800 PF00072 Response regulator receiver domain RIV7116_RS04800 PF01627 Hpt domain RIV7116_RS04805 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RIV7116_RS04805 PF00989 PAS fold RIV7116_RS04805 PF16736 Single Cache-like RIV7116_RS04805 PF00512 His Kinase A (phospho-acceptor) domain RIV7116_RS04810 PF13180 PDZ domain RIV7116_RS04840 PF03853 YjeF-related protein N-terminus RIV7116_RS04840 PF01256 Carbohydrate kinase RIV7116_RS04850 PF04960 Glutaminase RIV7116_RS04855 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase RIV7116_RS04875 PF02913 FAD linked oxidases, C-terminal domain RIV7116_RS04875 PF01565 FAD binding domain RIV7116_RS04905 PF00005 ABC transporter RIV7116_RS04905 PF12704 MacB-like periplasmic core domain RIV7116_RS04905 PF02687 FtsX-like permease family RIV7116_RS04920 PF00204 DNA gyrase B RIV7116_RS04920 PF00986 DNA gyrase B subunit, carboxyl terminus RIV7116_RS04920 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RIV7116_RS04920 PF01751 Toprim domain RIV7116_RS04925 PF04545 Sigma-70, region 4 RIV7116_RS04925 PF04539 Sigma-70 region 3 RIV7116_RS04925 PF04542 Sigma-70 region 2 RIV7116_RS04925 PF00140 Sigma-70 factor, region 1.2 RIV7116_RS04930 PF00762 Ferrochelatase RIV7116_RS04940 PF03989 DNA gyrase C-terminal domain, beta-propeller RIV7116_RS04940 PF00521 DNA gyrase/topoisomerase IV, subunit A RIV7116_RS04955 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion RIV7116_RS04960 PF02687 FtsX-like permease family RIV7116_RS04960 PF12704 MacB-like periplasmic core domain RIV7116_RS04960 PF00005 ABC transporter RIV7116_RS04965 PF00005 ABC transporter RIV7116_RS04970 PF13419 Haloacid dehalogenase-like hydrolase RIV7116_RS04975 PF08331 Domain of unknown function (DUF1730) RIV7116_RS04980 PF09150 Orange carotenoid protein, N-terminal RIV7116_RS05000 PF02954 Bacterial regulatory protein, Fis family RIV7116_RS05000 PF00072 Response regulator receiver domain RIV7116_RS05000 PF00158 Sigma-54 interaction domain RIV7116_RS05005 PF00196 Bacterial regulatory proteins, luxR family RIV7116_RS05005 PF00072 Response regulator receiver domain RIV7116_RS05010 PF03808 Glycosyl transferase WecB/TagA/CpsF family RIV7116_RS05015 PF00005 ABC transporter RIV7116_RS05030 PF12697 Alpha/beta hydrolase family RIV7116_RS05060 PF13181 Tetratricopeptide repeat RIV7116_RS05060 PF01435 Peptidase family M48 RIV7116_RS05065 PF00149 Calcineurin-like phosphoesterase RIV7116_RS05075 PF07690 Major Facilitator Superfamily RIV7116_RS05085 PF00756 Putative esterase RIV7116_RS05100 PF00873 AcrB/AcrD/AcrF family RIV7116_RS05110 PF00578 AhpC/TSA family RIV7116_RS05120 PF01740 STAS domain RIV7116_RS05130 PF10150 Ribonuclease E/G family RIV7116_RS05135 PF01351 Ribonuclease HII RIV7116_RS05145 PF01842 ACT domain RIV7116_RS05145 PF01817 Chorismate mutase type II RIV7116_RS05145 PF00800 Prephenate dehydratase RIV7116_RS05150 PF00004 ATPase family associated with various cellular activities (AAA) RIV7116_RS05150 PF05362 Lon protease (S16) C-terminal proteolytic domain RIV7116_RS05150 PF02190 ATP-dependent protease La (LON) substrate-binding domain RIV7116_RS05155 PF00338 Ribosomal protein S10p/S20e RIV7116_RS05160 PF03143 Elongation factor Tu C-terminal domain RIV7116_RS05160 PF00009 Elongation factor Tu GTP binding domain RIV7116_RS05160 PF03144 Elongation factor Tu domain 2 RIV7116_RS05165 PF00009 Elongation factor Tu GTP binding domain RIV7116_RS05165 PF03764 Elongation factor G, domain IV RIV7116_RS05165 PF14492 Elongation Factor G, domain II RIV7116_RS05165 PF00679 Elongation factor G C-terminus RIV7116_RS05165 PF03144 Elongation factor Tu domain 2 RIV7116_RS05170 PF00177 Ribosomal protein S7p/S5e RIV7116_RS05175 PF00164 Ribosomal protein S12/S23 RIV7116_RS05180 PF01521 Iron-sulphur cluster biosynthesis RIV7116_RS05185 PF00483 Nucleotidyl transferase RIV7116_RS05185 PF01050 Mannose-6-phosphate isomerase RIV7116_RS05200 PF01493 GXGXG motif RIV7116_RS05200 PF01645 Conserved region in glutamate synthase RIV7116_RS05200 PF00310 Glutamine amidotransferases class-II RIV7116_RS05200 PF04898 Glutamate synthase central domain RIV7116_RS05205 PF01522 Polysaccharide deacetylase RIV7116_RS05215 PF00892 EamA-like transporter family RIV7116_RS05220 PF00535 Glycosyl transferase family 2 RIV7116_RS05245 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain RIV7116_RS05245 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase RIV7116_RS05245 PF13288 DXP reductoisomerase C-terminal domain RIV7116_RS05250 PF03061 Thioesterase superfamily RIV7116_RS05270 PF00395 S-layer homology domain RIV7116_RS05270 PF00963 Cohesin domain RIV7116_RS05275 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RIV7116_RS05275 PF00672 HAMP domain RIV7116_RS05275 PF00512 His Kinase A (phospho-acceptor) domain RIV7116_RS05275 PF00072 Response regulator receiver domain RIV7116_RS05275 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) RIV7116_RS05275 PF01627 Hpt domain RIV7116_RS05290 PF01327 Polypeptide deformylase RIV7116_RS05305 PF01368 DHH family RIV7116_RS05305 PF10141 Single-strand DNA-specific exonuclease, C terminal domain RIV7116_RS05305 PF17768 RecJ OB domain RIV7116_RS05305 PF02272 DHHA1 domain RIV7116_RS05315 PF03572 Peptidase family S41 RIV7116_RS05315 PF00595 PDZ domain RIV7116_RS05325 PF00486 Transcriptional regulatory protein, C terminal RIV7116_RS05325 PF00072 Response regulator receiver domain RIV7116_RS05335 PF10664 Cyanobacterial and plastid NDH-1 subunit M RIV7116_RS05365 PF00591 Glycosyl transferase family, a/b domain RIV7116_RS05365 PF02885 Glycosyl transferase family, helical bundle domain RIV7116_RS05370 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RIV7116_RS05370 PF03466 LysR substrate binding domain RIV7116_RS05375 PF00355 Rieske [2Fe-2S] domain RIV7116_RS05390 PF02261 Aspartate decarboxylase RIV7116_RS05395 PF00719 Inorganic pyrophosphatase RIV7116_RS05405 PF04015 Domain of unknown function (DUF362) RIV7116_RS05410 PF00206 Lyase RIV7116_RS05410 PF10415 Fumarase C C-terminus RIV7116_RS05415 PF01066 CDP-alcohol phosphatidyltransferase RIV7116_RS05430 PF01494 FAD binding domain RIV7116_RS05435 PF16363 GDP-mannose 4,6 dehydratase RIV7116_RS05440 PF00534 Glycosyl transferases group 1 RIV7116_RS05440 PF13439 Glycosyltransferase Family 4 RIV7116_RS05445 PF02397 Bacterial sugar transferase RIV7116_RS05450 PF16363 GDP-mannose 4,6 dehydratase RIV7116_RS05455 PF01370 NAD dependent epimerase/dehydratase family RIV7116_RS05485 PF01812 5-formyltetrahydrofolate cyclo-ligase family RIV7116_RS05490 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain RIV7116_RS05490 PF01590 GAF domain RIV7116_RS05495 PF02397 Bacterial sugar transferase RIV7116_RS05535 PF01925 Sulfite exporter TauE/SafE RIV7116_RS05540 PF13649 Methyltransferase domain RIV7116_RS05545 PF03466 LysR substrate binding domain RIV7116_RS05545 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RIV7116_RS05560 PF01136 Peptidase family U32 RIV7116_RS05560 PF12392 Collagenase RIV7116_RS05565 PF02452 PemK-like, MazF-like toxin of type II toxin-antitoxin system RIV7116_RS05580 PF00248 Aldo/keto reductase family RIV7116_RS05585 PF02577 Bifunctional nuclease RIV7116_RS05590 PF00677 Lumazine binding domain RIV7116_RS05595 PF04225 Opacity-associated protein A LysM-like domain RIV7116_RS05595 PF01551 Peptidase family M23 RIV7116_RS05600 PF08279 HTH domain RIV7116_RS05600 PF03099 Biotin/lipoate A/B protein ligase family RIV7116_RS05600 PF02237 Biotin protein ligase C terminal domain RIV7116_RS05605 PF02578 Multi-copper polyphenol oxidoreductase laccase RIV7116_RS05615 PF00069 Protein kinase domain RIV7116_RS05615 PF08239 Bacterial SH3 domain RIV7116_RS05620 PF00069 Protein kinase domain RIV7116_RS05620 PF08239 Bacterial SH3 domain RIV7116_RS05630 PF00301 Rubredoxin RIV7116_RS05645 PF10693 Protein of unknown function (DUF2499) RIV7116_RS05655 PF00977 Histidine biosynthesis protein RIV7116_RS05670 PF00486 Transcriptional regulatory protein, C terminal RIV7116_RS05670 PF00072 Response regulator receiver domain RIV7116_RS05675 PF00989 PAS fold RIV7116_RS05675 PF00512 His Kinase A (phospho-acceptor) domain RIV7116_RS05675 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RIV7116_RS05680 PF01895 PhoU domain RIV7116_RS05690 PF13545 Crp-like helix-turn-helix domain RIV7116_RS05695 PF04966 Carbohydrate-selective porin, OprB family RIV7116_RS05695 PF00395 S-layer homology domain RIV7116_RS05700 PF04966 Carbohydrate-selective porin, OprB family RIV7116_RS05700 PF00395 S-layer homology domain RIV7116_RS05705 PF04966 Carbohydrate-selective porin, OprB family RIV7116_RS05705 PF00395 S-layer homology domain RIV7116_RS05725 PF00535 Glycosyl transferase family 2 RIV7116_RS05730 PF04055 Radical SAM superfamily RIV7116_RS05735 PF13326 Photosystem II Pbs27 RIV7116_RS05765 PF00361 Proton-conducting membrane transporter RIV7116_RS05770 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus RIV7116_RS05770 PF01010 NADH-dehyrogenase subunit F, TMs, (complex I) C-terminus RIV7116_RS05770 PF00361 Proton-conducting membrane transporter RIV7116_RS05775 PF00085 Thioredoxin RIV7116_RS05785 PF03466 LysR substrate binding domain RIV7116_RS05785 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RIV7116_RS05790 PF00069 Protein kinase domain RIV7116_RS05795 PF12849 PBP superfamily domain RIV7116_RS05805 PF13545 Crp-like helix-turn-helix domain RIV7116_RS05825 PF01612 3'-5' exonuclease RIV7116_RS05825 PF00476 DNA polymerase family A RIV7116_RS05825 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain RIV7116_RS05825 PF01367 5'-3' exonuclease, C-terminal SAM fold RIV7116_RS05850 PF01841 Transglutaminase-like superfamily RIV7116_RS05855 PF04107 Glutamate-cysteine ligase family 2(GCS2) RIV7116_RS05860 PF00690 Cation transporter/ATPase, N-terminus RIV7116_RS05860 PF00689 Cation transporting ATPase, C-terminus RIV7116_RS05865 PF02463 RecF/RecN/SMC N terminal domain RIV7116_RS05870 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain RIV7116_RS05870 PF02896 PEP-utilising enzyme, TIM barrel domain RIV7116_RS05870 PF00391 PEP-utilising enzyme, mobile domain RIV7116_RS05885 PF04966 Carbohydrate-selective porin, OprB family RIV7116_RS05895 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily RIV7116_RS05905 PF00005 ABC transporter RIV7116_RS05915 PF01891 Cobalt uptake substrate-specific transmembrane region RIV7116_RS05915 PF13190 PDGLE domain RIV7116_RS05920 PF07732 Multicopper oxidase RIV7116_RS05935 PF03239 Iron permease FTR1 family RIV7116_RS05945 PF07885 Ion channel RIV7116_RS05945 PF17655 Inward rectifier potassium channel C-terminal domain RIV7116_RS05955 PF01628 HrcA protein C terminal domain RIV7116_RS05975 PF06426 Serine acetyltransferase, N-terminal RIV7116_RS05975 PF00132 Bacterial transferase hexapeptide (six repeats) RIV7116_RS05990 PF17975 Ribonucleotide reductase alpha domain RIV7116_RS06000 PF00076 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) RIV7116_RS06005 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain RIV7116_RS06010 PF00923 Transaldolase/Fructose-6-phosphate aldolase RIV7116_RS06015 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain RIV7116_RS06015 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain RIV7116_RS06020 PF01471 Putative peptidoglycan binding domain RIV7116_RS06020 PF10128 Glucose-6-phosphate dehydrogenase subunit RIV7116_RS06025 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain RIV7116_RS06025 PF07685 CobB/CobQ-like glutamine amidotransferase domain RIV7116_RS06030 PF00027 Cyclic nucleotide-binding domain RIV7116_RS06030 PF13545 Crp-like helix-turn-helix domain RIV7116_RS06050 PF05198 Translation initiation factor IF-3, N-terminal domain RIV7116_RS06050 PF00707 Translation initiation factor IF-3, C-terminal domain RIV7116_RS06055 PF00561 alpha/beta hydrolase fold RIV7116_RS06070 PF01938 TRAM domain RIV7116_RS06070 PF04055 Radical SAM superfamily RIV7116_RS06070 PF00919 Uncharacterized protein family UPF0004 RIV7116_RS06075 PF04193 PQ loop repeat RIV7116_RS06085 PF01264 Chorismate synthase RIV7116_RS06095 PF00124 Photosynthetic reaction centre protein RIV7116_RS06100 PF00384 Molybdopterin oxidoreductase RIV7116_RS06100 PF01568 Molydopterin dinucleotide binding domain RIV7116_RS06105 PF03704 Bacterial transcriptional activator domain RIV7116_RS06105 PF00931 NB-ARC domain RIV7116_RS06105 PF00486 Transcriptional regulatory protein, C terminal RIV7116_RS06120 PF01381 Helix-turn-helix RIV7116_RS06130 PF05685 Putative restriction endonuclease RIV7116_RS06135 PF08323 Starch synthase catalytic domain RIV7116_RS06135 PF00534 Glycosyl transferases group 1 RIV7116_RS06145 PF04055 Radical SAM superfamily RIV7116_RS06160 PF02926 THUMP domain RIV7116_RS06160 PF01170 Putative RNA methylase family UPF0020 RIV7116_RS06175 PF00561 alpha/beta hydrolase fold RIV7116_RS06190 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus RIV7116_RS06190 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus RIV7116_RS06195 PF04539 Sigma-70 region 3 RIV7116_RS06195 PF04542 Sigma-70 region 2 RIV7116_RS06195 PF04545 Sigma-70, region 4 RIV7116_RS06195 PF00140 Sigma-70 factor, region 1.2 RIV7116_RS06200 PF01475 Ferric uptake regulator family RIV7116_RS06205 PF01510 N-acetylmuramoyl-L-alanine amidase RIV7116_RS06205 PF01471 Putative peptidoglycan binding domain RIV7116_RS06210 PF02514 CobN/Magnesium Chelatase RIV7116_RS06215 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RIV7116_RS06215 PF00512 His Kinase A (phospho-acceptor) domain RIV7116_RS06215 PF00989 PAS fold RIV7116_RS06220 PF16657 Maltogenic Amylase, C-terminal domain RIV7116_RS06220 PF00128 Alpha amylase, catalytic domain RIV7116_RS06220 PF02903 Alpha amylase, N-terminal ig-like domain RIV7116_RS06230 PF00890 FAD binding domain RIV7116_RS06230 PF02910 Fumarate reductase flavoprotein C-term RIV7116_RS06260 PF01169 Uncharacterized protein family UPF0016 RIV7116_RS06265 PF01594 AI-2E family transporter RIV7116_RS06275 PF00004 ATPase family associated with various cellular activities (AAA) RIV7116_RS06275 PF01434 Peptidase family M41 RIV7116_RS06275 PF17862 AAA+ lid domain RIV7116_RS06280 PF03033 Glycosyltransferase family 28 N-terminal domain RIV7116_RS06280 PF00201 UDP-glucoronosyl and UDP-glucosyl transferase RIV7116_RS06300 PF13460 NAD(P)H-binding RIV7116_RS06305 PF00155 Aminotransferase class I and II RIV7116_RS06320 PF13181 Tetratricopeptide repeat RIV7116_RS06320 PF01435 Peptidase family M48 RIV7116_RS06335 PF09382 RQC domain RIV7116_RS06335 PF16124 RecQ zinc-binding RIV7116_RS06335 PF00570 HRDC domain RIV7116_RS06335 PF00270 DEAD/DEAH box helicase RIV7116_RS06335 PF00271 Helicase conserved C-terminal domain RIV7116_RS06350 PF01297 Zinc-uptake complex component A periplasmic RIV7116_RS06360 PF01131 DNA topoisomerase RIV7116_RS06360 PF01751 Toprim domain RIV7116_RS06360 PF01396 Topoisomerase DNA binding C4 zinc finger RIV7116_RS06370 PF02350 UDP-N-acetylglucosamine 2-epimerase RIV7116_RS06375 PF00069 Protein kinase domain RIV7116_RS06375 PF03793 PASTA domain RIV7116_RS06390 PF00534 Glycosyl transferases group 1 RIV7116_RS06390 PF08323 Starch synthase catalytic domain RIV7116_RS06395 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain RIV7116_RS06395 PF03900 Porphobilinogen deaminase, C-terminal domain RIV7116_RS06410 PF00749 tRNA synthetases class I (E and Q), catalytic domain RIV7116_RS06410 PF14159 CAAD domains of cyanobacterial aminoacyl-tRNA synthetase RIV7116_RS06425 PF03070 TENA/THI-4/PQQC family RIV7116_RS06435 PF00920 Dehydratase family RIV7116_RS06445 PF02954 Bacterial regulatory protein, Fis family RIV7116_RS06445 PF00158 Sigma-54 interaction domain RIV7116_RS06450 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family RIV7116_RS06455 PF00535 Glycosyl transferase family 2 RIV7116_RS06470 PF00563 EAL domain RIV7116_RS06470 PF00990 Diguanylate cyclase, GGDEF domain RIV7116_RS06470 PF05231 MASE1 RIV7116_RS06470 PF08447 PAS fold RIV7116_RS06470 PF13426 PAS domain RIV7116_RS06470 PF08448 PAS fold RIV7116_RS06485 PF00005 ABC transporter RIV7116_RS06485 PF12704 MacB-like periplasmic core domain RIV7116_RS06485 PF02687 FtsX-like permease family RIV7116_RS06500 PF05996 Ferredoxin-dependent bilin reductase RIV7116_RS06525 PF00005 ABC transporter RIV7116_RS06555 PF08865 Domain of unknown function (DUF1830) RIV7116_RS06560 PF00919 Uncharacterized protein family UPF0004 RIV7116_RS06560 PF01938 TRAM domain RIV7116_RS06560 PF04055 Radical SAM superfamily RIV7116_RS06565 PF01966 HD domain RIV7116_RS06565 PF00672 HAMP domain RIV7116_RS06585 PF02617 ATP-dependent Clp protease adaptor protein ClpS RIV7116_RS06620 PF01061 ABC-2 type transporter RIV7116_RS06620 PF00005 ABC transporter RIV7116_RS06620 PF00498 FHA domain RIV7116_RS06630 PF00069 Protein kinase domain RIV7116_RS06635 PF00512 His Kinase A (phospho-acceptor) domain RIV7116_RS06635 PF00672 HAMP domain RIV7116_RS06635 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RIV7116_RS06640 PF00069 Protein kinase domain RIV7116_RS06640 PF03793 PASTA domain RIV7116_RS06670 PF02576 RimP N-terminal domain RIV7116_RS06675 PF08529 NusA N-terminal domain RIV7116_RS06675 PF13184 NusA-like KH domain RIV7116_RS06675 PF00575 S1 RNA binding domain RIV7116_RS06680 PF00009 Elongation factor Tu GTP binding domain RIV7116_RS06680 PF11987 Translation-initiation factor 2 RIV7116_RS06680 PF04760 Translation initiation factor IF-2, N-terminal region RIV7116_RS06695 PF01435 Peptidase family M48 RIV7116_RS06705 PF01336 OB-fold nucleic acid binding domain RIV7116_RS06705 PF00152 tRNA synthetases class II (D, K and N) RIV7116_RS06705 PF13619 KTSC domain RIV7116_RS06740 PF13426 PAS domain RIV7116_RS06740 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RIV7116_RS06740 PF00672 HAMP domain RIV7116_RS06740 PF14827 Double sensory domain of two-component sensor kinase RIV7116_RS06740 PF00512 His Kinase A (phospho-acceptor) domain RIV7116_RS06765 PF17941 Polyphosphate kinase C-terminal domain 1 RIV7116_RS06765 PF13089 Polyphosphate kinase N-terminal domain RIV7116_RS06765 PF02503 Polyphosphate kinase middle domain RIV7116_RS06765 PF13090 Polyphosphate kinase C-terminal domain 2 RIV7116_RS06770 PF01339 CheB methylesterase RIV7116_RS06770 PF00072 Response regulator receiver domain RIV7116_RS06775 PF11016 Protein of unknown function (DUF2854) RIV7116_RS06785 PF00990 Diguanylate cyclase, GGDEF domain RIV7116_RS06785 PF00360 Phytochrome region RIV7116_RS06785 PF01590 GAF domain RIV7116_RS06785 PF00563 EAL domain RIV7116_RS06810 PF03588 Leucyl/phenylalanyl-tRNA protein transferase RIV7116_RS06820 PF00253 Ribosomal protein S14p/S29e RIV7116_RS06825 PF00730 HhH-GPD superfamily base excision DNA repair protein RIV7116_RS06825 PF00633 Helix-hairpin-helix motif RIV7116_RS06830 PF02163 Peptidase family M50 RIV7116_RS06830 PF13180 PDZ domain RIV7116_RS06835 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) RIV7116_RS06835 PF02403 Seryl-tRNA synthetase N-terminal domain RIV7116_RS06860 PF00672 HAMP domain RIV7116_RS06860 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RIV7116_RS06860 PF18698 Histidine kinase sensor domain RIV7116_RS06860 PF00512 His Kinase A (phospho-acceptor) domain RIV7116_RS06860 PF00989 PAS fold RIV7116_RS06865 PF00395 S-layer homology domain RIV7116_RS06865 PF00963 Cohesin domain RIV7116_RS06880 PF13378 Enolase C-terminal domain-like RIV7116_RS06880 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain RIV7116_RS06890 PF01156 Inosine-uridine preferring nucleoside hydrolase RIV7116_RS06905 PF07969 Amidohydrolase family RIV7116_RS06910 PF00294 pfkB family carbohydrate kinase RIV7116_RS06920 PF01734 Patatin-like phospholipase RIV7116_RS06925 PF00005 ABC transporter RIV7116_RS06925 PF03459 TOBE domain RIV7116_RS06925 PF17912 MalK OB fold domain RIV7116_RS06930 PF00528 Binding-protein-dependent transport system inner membrane component RIV7116_RS06935 PF00528 Binding-protein-dependent transport system inner membrane component RIV7116_RS06940 PF01547 Bacterial extracellular solute-binding protein RIV7116_RS06945 PF08447 PAS fold RIV7116_RS06945 PF08448 PAS fold RIV7116_RS06945 PF00563 EAL domain RIV7116_RS06945 PF05231 MASE1 RIV7116_RS06945 PF13426 PAS domain RIV7116_RS06945 PF00990 Diguanylate cyclase, GGDEF domain RIV7116_RS06950 PF02152 Dihydroneopterin aldolase RIV7116_RS06955 PF16582 Middle domain of thiamine pyrophosphate RIV7116_RS06955 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain RIV7116_RS06960 PF00474 Sodium:solute symporter family RIV7116_RS06975 PF00378 Enoyl-CoA hydratase/isomerase RIV7116_RS06995 PF04012 PspA/IM30 family RIV7116_RS07000 PF04012 PspA/IM30 family RIV7116_RS07005 PF00085 Thioredoxin RIV7116_RS07010 PF00155 Aminotransferase class I and II RIV7116_RS07020 PF00072 Response regulator receiver domain RIV7116_RS07030 PF08459 UvrC Helix-hairpin-helix N-terminal RIV7116_RS07030 PF01541 GIY-YIG catalytic domain RIV7116_RS07030 PF12826 Helix-hairpin-helix motif RIV7116_RS07030 PF02151 UvrB/uvrC motif RIV7116_RS07045 PF01118 Semialdehyde dehydrogenase, NAD binding domain RIV7116_RS07075 PF02527 rRNA small subunit methyltransferase G RIV7116_RS07080 PF09383 NIL domain RIV7116_RS07080 PF00005 ABC transporter RIV7116_RS07085 PF00072 Response regulator receiver domain RIV7116_RS07085 PF00486 Transcriptional regulatory protein, C terminal RIV7116_RS07095 PF00462 Glutaredoxin RIV7116_RS07100 PF01722 BolA-like protein RIV7116_RS07110 PF01483 Proprotein convertase P-domain RIV7116_RS07110 PF00082 Subtilase family RIV7116_RS07120 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region RIV7116_RS07125 PF00462 Glutaredoxin RIV7116_RS07135 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded RIV7116_RS07140 PF01488 Shikimate / quinate 5-dehydrogenase RIV7116_RS07140 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain RIV7116_RS07140 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain RIV7116_RS07145 PF13640 2OG-Fe(II) oxygenase superfamily RIV7116_RS07145 PF18331 PKHD-type hydroxylase C-terminal domain RIV7116_RS07160 PF03699 Uncharacterised protein family (UPF0182) RIV7116_RS07175 PF01235 Sodium:alanine symporter family RIV7116_RS07185 PF00067 Cytochrome P450 RIV7116_RS07200 PF00342 Phosphoglucose isomerase RIV7116_RS07255 PF11910 Cyanobacterial and plant NDH-1 subunit O RIV7116_RS07260 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain RIV7116_RS07260 PF06827 Zinc finger found in FPG and IleRS RIV7116_RS07260 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain RIV7116_RS07265 PF02427 Photosystem I reaction centre subunit IV / PsaE RIV7116_RS07280 PF00953 Glycosyl transferase family 4 RIV7116_RS07280 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 RIV7116_RS07285 PF03912 Psb28 protein RIV7116_RS07290 PF02580 D-Tyr-tRNA(Tyr) deacylase RIV7116_RS07295 PF02492 CobW/HypB/UreG, nucleotide-binding domain RIV7116_RS07295 PF07683 Cobalamin synthesis protein cobW C-terminal domain RIV7116_RS07300 PF01406 tRNA synthetases class I (C) catalytic domain RIV7116_RS07300 PF09190 DALR domain RIV7116_RS07305 PF01594 AI-2E family transporter RIV7116_RS07320 PF07444 Ycf66 protein N-terminus RIV7116_RS07330 PF01467 Cytidylyltransferase-like RIV7116_RS07335 PF13537 Glutamine amidotransferase domain RIV7116_RS07335 PF00733 Asparagine synthase RIV7116_RS07350 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain RIV7116_RS07350 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain RIV7116_RS07365 PF00733 Asparagine synthase RIV7116_RS07365 PF13537 Glutamine amidotransferase domain RIV7116_RS07375 PF01790 Prolipoprotein diacylglyceryl transferase RIV7116_RS07380 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases RIV7116_RS07385 PF01613 Flavin reductase like domain RIV7116_RS07385 PF00753 Metallo-beta-lactamase superfamily RIV7116_RS07400 PF04055 Radical SAM superfamily RIV7116_RS07415 PF00474 Sodium:solute symporter family RIV7116_RS07420 PF07650 KH domain RIV7116_RS07420 PF01926 50S ribosome-binding GTPase RIV7116_RS07430 PF12323 Helix-turn-helix domain RIV7116_RS07430 PF01385 Probable transposase RIV7116_RS07430 PF07282 Putative transposase DNA-binding domain RIV7116_RS07435 PF02545 Maf-like protein RIV7116_RS07450 PF10042 Uncharacterized conserved protein (DUF2278) RIV7116_RS07455 PF07228 Stage II sporulation protein E (SpoIIE) RIV7116_RS07455 PF08673 Phosphoserine phosphatase RsbU, N-terminal domain RIV7116_RS07460 PF02881 SRP54-type protein, helical bundle domain RIV7116_RS07460 PF00448 SRP54-type protein, GTPase domain RIV7116_RS07465 PF01029 NusB family RIV7116_RS07480 PF00535 Glycosyl transferase family 2 RIV7116_RS07500 PF00535 Glycosyl transferase family 2 RIV7116_RS07505 PF00114 Pilin (bacterial filament) RIV7116_RS07505 PF07963 Prokaryotic N-terminal methylation motif RIV7116_RS07525 PF00830 Ribosomal L28 family RIV7116_RS07530 PF00183 Hsp90 protein RIV7116_RS07535 PF00535 Glycosyl transferase family 2 RIV7116_RS07540 PF00535 Glycosyl transferase family 2 RIV7116_RS07545 PF00535 Glycosyl transferase family 2 RIV7116_RS07550 PF00535 Glycosyl transferase family 2 RIV7116_RS07550 PF18674 TarS beta-glycosyltransferase C-terminal domain 1 RIV7116_RS07555 PF10431 C-terminal, D2-small domain, of ClpB protein RIV7116_RS07555 PF02861 Clp amino terminal domain, pathogenicity island component RIV7116_RS07555 PF17871 AAA lid domain RIV7116_RS07555 PF00004 ATPase family associated with various cellular activities (AAA) RIV7116_RS07555 PF07724 AAA domain (Cdc48 subfamily) RIV7116_RS07560 PF00395 S-layer homology domain RIV7116_RS07560 PF04966 Carbohydrate-selective porin, OprB family RIV7116_RS07565 PF00113 Enolase, C-terminal TIM barrel domain RIV7116_RS07565 PF03952 Enolase, N-terminal domain RIV7116_RS07570 PF01118 Semialdehyde dehydrogenase, NAD binding domain RIV7116_RS07570 PF02774 Semialdehyde dehydrogenase, dimerisation domain RIV7116_RS07575 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase RIV7116_RS07575 PF00925 GTP cyclohydrolase II RIV7116_RS07610 PF02574 Homocysteine S-methyltransferase RIV7116_RS07610 PF02310 B12 binding domain RIV7116_RS07610 PF02607 B12 binding domain RIV7116_RS07610 PF02965 Vitamin B12 dependent methionine synthase, activation domain RIV7116_RS07610 PF00809 Pterin binding enzyme RIV7116_RS07625 PF12146 Serine aminopeptidase, S33 RIV7116_RS07630 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain RIV7116_RS07630 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain RIV7116_RS07630 PF06827 Zinc finger found in FPG and IleRS RIV7116_RS07640 PF01872 RibD C-terminal domain RIV7116_RS07640 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region RIV7116_RS07660 PF00436 Single-strand binding protein family RIV7116_RS07675 PF01520 N-acetylmuramoyl-L-alanine amidase RIV7116_RS07685 PF01520 N-acetylmuramoyl-L-alanine amidase RIV7116_RS07690 PF01177 Asp/Glu/Hydantoin racemase RIV7116_RS07695 PF00348 Polyprenyl synthetase RIV7116_RS07715 PF01841 Transglutaminase-like superfamily RIV7116_RS07715 PF13559 Domain of unknown function (DUF4129) RIV7116_RS07715 PF11992 Domain of unknown function (DUF3488) RIV7116_RS07720 PF04025 Domain of unknown function (DUF370) RIV7116_RS07725 PF00625 Guanylate kinase RIV7116_RS07730 PF02605 Photosystem I reaction centre subunit XI RIV7116_RS07735 PF02507 Photosystem I reaction centre subunit III RIV7116_RS07740 PF00814 Glycoprotease family RIV7116_RS07745 PF00561 alpha/beta hydrolase fold RIV7116_RS07755 PF00583 Acetyltransferase (GNAT) family RIV7116_RS07770 PF05175 Methyltransferase small domain RIV7116_RS07775 PF01300 Telomere recombination RIV7116_RS07780 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RIV7116_RS07780 PF00512 His Kinase A (phospho-acceptor) domain RIV7116_RS07780 PF09308 LuxQ, periplasmic RIV7116_RS07780 PF00072 Response regulator receiver domain RIV7116_RS07785 PF00583 Acetyltransferase (GNAT) family RIV7116_RS07795 PF07549 SecD/SecF GG Motif RIV7116_RS07795 PF02355 Protein export membrane protein RIV7116_RS07800 PF07549 SecD/SecF GG Motif RIV7116_RS07800 PF02355 Protein export membrane protein RIV7116_RS07805 PF00364 Biotin-requiring enzyme RIV7116_RS07805 PF02780 Transketolase, C-terminal domain RIV7116_RS07805 PF02779 Transketolase, pyrimidine binding domain RIV7116_RS07815 PF00490 Delta-aminolevulinic acid dehydratase RIV7116_RS07825 PF00009 Elongation factor Tu GTP binding domain RIV7116_RS07825 PF16658 Class II release factor RF3, C-terminal domain RIV7116_RS07830 PF01435 Peptidase family M48 RIV7116_RS07840 PF13439 Glycosyltransferase Family 4 RIV7116_RS07840 PF00534 Glycosyl transferases group 1 RIV7116_RS07850 PF05670 NFACT protein RNA binding domain RIV7116_RS07865 PF01545 Cation efflux family RIV7116_RS07865 PF16916 Dimerisation domain of Zinc Transporter RIV7116_RS07875 PF01471 Putative peptidoglycan binding domain RIV7116_RS07875 PF08291 Peptidase M15 RIV7116_RS07880 PF01209 ubiE/COQ5 methyltransferase family RIV7116_RS07885 PF00202 Aminotransferase class-III RIV7116_RS07895 PF02666 Phosphatidylserine decarboxylase RIV7116_RS07905 PF00106 short chain dehydrogenase RIV7116_RS07910 PF00155 Aminotransferase class I and II RIV7116_RS07920 PF07993 Male sterility protein RIV7116_RS07920 PF00550 Phosphopantetheine attachment site RIV7116_RS07930 PF08241 Methyltransferase domain RIV7116_RS07935 PF00501 AMP-binding enzyme RIV7116_RS07940 PF07690 Major Facilitator Superfamily RIV7116_RS07960 PF00400 WD domain, G-beta repeat RIV7116_RS07960 PF00931 NB-ARC domain RIV7116_RS07975 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase RIV7116_RS07975 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain RIV7116_RS08000 PF00682 HMGL-like RIV7116_RS08005 PF00330 Aconitase family (aconitate hydratase) RIV7116_RS08010 PF00694 Aconitase C-terminal domain RIV7116_RS08040 PF04715 Anthranilate synthase component I, N terminal region RIV7116_RS08040 PF00425 chorismate binding enzyme RIV7116_RS08040 PF00117 Glutamine amidotransferase class-I RIV7116_RS08045 PF00218 Indole-3-glycerol phosphate synthase RIV7116_RS08050 PF00290 Tryptophan synthase alpha chain RIV7116_RS08055 PF00291 Pyridoxal-phosphate dependent enzyme RIV7116_RS08135 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB RIV7116_RS08135 PF17287 POTRA domain RIV7116_RS08135 PF08479 POTRA domain, ShlB-type RIV7116_RS08150 PF05729 NACHT domain RIV7116_RS08150 PF00400 WD domain, G-beta repeat RIV7116_RS08150 PF00805 Pentapeptide repeats (8 copies) RIV7116_RS08155 PF00805 Pentapeptide repeats (8 copies) RIV7116_RS08155 PF00400 WD domain, G-beta repeat RIV7116_RS08155 PF05729 NACHT domain RIV7116_RS08325 PF00772 DnaB-like helicase N terminal domain RIV7116_RS08325 PF03796 DnaB-like helicase C terminal domain RIV7116_RS08325 PF14528 LAGLIDADG-like domain RIV7116_RS08395 PF17862 AAA+ lid domain RIV7116_RS08395 PF06480 FtsH Extracellular RIV7116_RS08395 PF00004 ATPase family associated with various cellular activities (AAA) RIV7116_RS08395 PF01434 Peptidase family M41 RIV7116_RS08470 PF12802 MarR family RIV7116_RS08475 PF13649 Methyltransferase domain RIV7116_RS08485 PF00512 His Kinase A (phospho-acceptor) domain RIV7116_RS08485 PF18698 Histidine kinase sensor domain RIV7116_RS08485 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RIV7116_RS08485 PF00672 HAMP domain RIV7116_RS08490 PF00072 Response regulator receiver domain RIV7116_RS08490 PF00486 Transcriptional regulatory protein, C terminal RIV7116_RS08495 PF00462 Glutaredoxin RIV7116_RS08500 PF13411 MerR HTH family regulatory protein RIV7116_RS08510 PF00873 AcrB/AcrD/AcrF family RIV7116_RS08535 PF07731 Multicopper oxidase RIV7116_RS08535 PF07732 Multicopper oxidase RIV7116_RS08545 PF01209 ubiE/COQ5 methyltransferase family RIV7116_RS08550 PF00403 Heavy-metal-associated domain RIV7116_RS08555 PF01022 Bacterial regulatory protein, arsR family RIV7116_RS08560 PF00890 FAD binding domain RIV7116_RS08560 PF02910 Fumarate reductase flavoprotein C-term RIV7116_RS08565 PF00753 Metallo-beta-lactamase superfamily RIV7116_RS08575 PF01022 Bacterial regulatory protein, arsR family RIV7116_RS08580 PF04539 Sigma-70 region 3 RIV7116_RS08580 PF04542 Sigma-70 region 2 RIV7116_RS08580 PF04545 Sigma-70, region 4 RIV7116_RS08580 PF00140 Sigma-70 factor, region 1.2 RIV7116_RS08585 PF00512 His Kinase A (phospho-acceptor) domain RIV7116_RS08585 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RIV7116_RS08590 PF00486 Transcriptional regulatory protein, C terminal RIV7116_RS08590 PF00072 Response regulator receiver domain RIV7116_RS08610 PF00873 AcrB/AcrD/AcrF family RIV7116_RS08620 PF01451 Low molecular weight phosphotyrosine protein phosphatase RIV7116_RS08625 PF03358 NADPH-dependent FMN reductase RIV7116_RS08630 PF01758 Sodium Bile acid symporter family RIV7116_RS08635 PF12849 PBP superfamily domain RIV7116_RS08640 PF01022 Bacterial regulatory protein, arsR family RIV7116_RS08645 PF00140 Sigma-70 factor, region 1.2 RIV7116_RS08645 PF04545 Sigma-70, region 4 RIV7116_RS08645 PF04542 Sigma-70 region 2 RIV7116_RS08645 PF04539 Sigma-70 region 3 RIV7116_RS08665 PF07731 Multicopper oxidase RIV7116_RS08665 PF07732 Multicopper oxidase RIV7116_RS08665 PF00394 Multicopper oxidase RIV7116_RS08670 PF05275 Copper resistance protein B precursor (CopB) RIV7116_RS08720 PF00403 Heavy-metal-associated domain RIV7116_RS08765 PF01555 DNA methylase RIV7116_RS08855 PF01580 FtsK/SpoIIIE family RIV7116_RS08855 PF17854 FtsK alpha domain RIV7116_RS08895 PF07730 Histidine kinase RIV7116_RS08965 PF01520 N-acetylmuramoyl-L-alanine amidase RIV7116_RS09015 PF12965 Domain of unknown function (DUF3854) RIV7116_RS09025 PF00589 Phage integrase family RIV7116_RS09030 PF00069 Protein kinase domain RIV7116_RS09030 PF03793 PASTA domain RIV7116_RS09045 PF12833 Helix-turn-helix domain RIV7116_RS09050 PF12833 Helix-turn-helix domain RIV7116_RS09050 PF02311 AraC-like ligand binding domain RIV7116_RS09085 PF02885 Glycosyl transferase family, helical bundle domain RIV7116_RS09085 PF00591 Glycosyl transferase family, a/b domain RIV7116_RS09090 PF00291 Pyridoxal-phosphate dependent enzyme RIV7116_RS09095 PF00264 Common central domain of tyrosinase RIV7116_RS09100 PF00290 Tryptophan synthase alpha chain RIV7116_RS09105 PF00218 Indole-3-glycerol phosphate synthase RIV7116_RS09115 PF04715 Anthranilate synthase component I, N terminal region RIV7116_RS09115 PF00425 chorismate binding enzyme RIV7116_RS09115 PF00117 Glutamine amidotransferase class-I RIV7116_RS09130 PF01761 3-dehydroquinate synthase RIV7116_RS09140 PF01817 Chorismate mutase type II RIV7116_RS09140 PF02153 Prephenate dehydrogenase RIV7116_RS09145 PF00534 Glycosyl transferases group 1 RIV7116_RS09145 PF13579 Glycosyl transferase 4-like domain RIV7116_RS09185 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain RIV7116_RS09185 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase RIV7116_RS09190 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain RIV7116_RS09190 PF00205 Thiamine pyrophosphate enzyme, central domain RIV7116_RS09190 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain RIV7116_RS09200 PF00072 Response regulator receiver domain RIV7116_RS09200 PF00486 Transcriptional regulatory protein, C terminal RIV7116_RS09205 PF00132 Bacterial transferase hexapeptide (six repeats) RIV7116_RS09205 PF14602 Hexapeptide repeat of succinyl-transferase RIV7116_RS09205 PF12464 Maltose acetyltransferase RIV7116_RS09210 PF12464 Maltose acetyltransferase RIV7116_RS09210 PF14602 Hexapeptide repeat of succinyl-transferase RIV7116_RS09210 PF00132 Bacterial transferase hexapeptide (six repeats) RIV7116_RS09230 PF00737 Photosystem II 10 kDa phosphoprotein RIV7116_RS09235 PF02416 mttA/Hcf106 family RIV7116_RS09240 PF01195 Peptidyl-tRNA hydrolase RIV7116_RS09250 PF01165 Ribosomal protein S21 RIV7116_RS09255 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases RIV7116_RS09260 PF00294 pfkB family carbohydrate kinase RIV7116_RS09265 PF00459 Inositol monophosphatase family RIV7116_RS09275 PF07286 Protein of unknown function (DUF1445) RIV7116_RS09290 PF01475 Ferric uptake regulator family RIV7116_RS09315 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase RIV7116_RS09330 PF13180 PDZ domain RIV7116_RS09365 PF04551 GcpE protein RIV7116_RS09370 PF03572 Peptidase family S41 RIV7116_RS09370 PF00595 PDZ domain RIV7116_RS09385 PF00009 Elongation factor Tu GTP binding domain RIV7116_RS09385 PF03764 Elongation factor G, domain IV RIV7116_RS09385 PF14492 Elongation Factor G, domain II RIV7116_RS09385 PF00679 Elongation factor G C-terminus RIV7116_RS09415 PF03471 Transporter associated domain RIV7116_RS09415 PF00571 CBS domain RIV7116_RS09415 PF01595 Cyclin M transmembrane N-terminal domain RIV7116_RS09420 PF00271 Helicase conserved C-terminal domain RIV7116_RS09420 PF02559 CarD-like/TRCF domain RIV7116_RS09420 PF00270 DEAD/DEAH box helicase RIV7116_RS09420 PF17757 UvrB interaction domain RIV7116_RS09420 PF03461 TRCF domain RIV7116_RS09430 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain RIV7116_RS09430 PF00117 Glutamine amidotransferase class-I RIV7116_RS09450 PF00082 Subtilase family RIV7116_RS09475 PF00497 Bacterial extracellular solute-binding proteins, family 3 RIV7116_RS09480 PF00528 Binding-protein-dependent transport system inner membrane component RIV7116_RS09485 PF00528 Binding-protein-dependent transport system inner membrane component RIV7116_RS09490 PF00005 ABC transporter RIV7116_RS09510 PF00390 Malic enzyme, N-terminal domain RIV7116_RS09510 PF03949 Malic enzyme, NAD binding domain RIV7116_RS09515 PF00350 Dynamin family RIV7116_RS09520 PF00124 Photosynthetic reaction centre protein RIV7116_RS09530 PF00124 Photosynthetic reaction centre protein RIV7116_RS09535 PF03062 MBOAT, membrane-bound O-acyltransferase family RIV7116_RS09550 PF00311 Phosphoenolpyruvate carboxylase RIV7116_RS09575 PF01192 RNA polymerase Rpb6 RIV7116_RS09595 PF00072 Response regulator receiver domain RIV7116_RS09600 PF00072 Response regulator receiver domain RIV7116_RS09600 PF02954 Bacterial regulatory protein, Fis family RIV7116_RS09600 PF00158 Sigma-54 interaction domain RIV7116_RS09605 PF00989 PAS fold RIV7116_RS09605 PF00512 His Kinase A (phospho-acceptor) domain RIV7116_RS09605 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RIV7116_RS09610 PF00850 Histone deacetylase domain RIV7116_RS09615 PF00924 Mechanosensitive ion channel RIV7116_RS09615 PF05552 Conserved TM helix RIV7116_RS09620 PF00535 Glycosyl transferase family 2 RIV7116_RS09635 PF00561 alpha/beta hydrolase fold RIV7116_RS09640 PF04228 Putative neutral zinc metallopeptidase RIV7116_RS09650 PF17760 UvrA interaction domain RIV7116_RS09650 PF17755 UvrA DNA-binding domain RIV7116_RS09655 PF13359 DDE superfamily endonuclease RIV7116_RS09655 PF13613 Helix-turn-helix of DDE superfamily endonuclease RIV7116_RS09670 PF09335 SNARE associated Golgi protein RIV7116_RS09690 PF06724 Domain of Unknown Function (DUF1206) RIV7116_RS09695 PF00561 alpha/beta hydrolase fold RIV7116_RS09705 PF13476 AAA domain RIV7116_RS09720 PF00923 Transaldolase/Fructose-6-phosphate aldolase RIV7116_RS09730 PF00391 PEP-utilising enzyme, mobile domain RIV7116_RS09730 PF00224 Pyruvate kinase, barrel domain RIV7116_RS09730 PF02887 Pyruvate kinase, alpha/beta domain RIV7116_RS09735 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain RIV7116_RS09735 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain RIV7116_RS09740 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain RIV7116_RS09740 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain RIV7116_RS09745 PF00343 Carbohydrate phosphorylase RIV7116_RS09750 PF03894 D-xylulose 5-phosphate/D-fructose 6-phosphate phosphoketolase RIV7116_RS09750 PF09364 XFP N-terminal domain RIV7116_RS09750 PF09363 XFP C-terminal domain RIV7116_RS09755 PF05239 PRC-barrel domain RIV7116_RS09755 PF01782 RimM N-terminal domain RIV7116_RS09760 PF00155 Aminotransferase class I and II RIV7116_RS09765 PF00107 Zinc-binding dehydrogenase RIV7116_RS09765 PF08240 Alcohol dehydrogenase GroES-like domain RIV7116_RS09770 PF13302 Acetyltransferase (GNAT) domain RIV7116_RS09780 PF12911 N-terminal TM domain of oligopeptide transport permease C RIV7116_RS09780 PF00528 Binding-protein-dependent transport system inner membrane component RIV7116_RS09790 PF01648 4'-phosphopantetheinyl transferase superfamily RIV7116_RS09795 PF12697 Alpha/beta hydrolase family RIV7116_RS09800 PF00072 Response regulator receiver domain RIV7116_RS09800 PF00486 Transcriptional regulatory protein, C terminal RIV7116_RS09835 PF13807 G-rich domain on putative tyrosine kinase RIV7116_RS09835 PF13614 AAA domain RIV7116_RS09835 PF02706 Chain length determinant protein RIV7116_RS09840 PF04932 O-Antigen ligase RIV7116_RS09845 PF14667 Polysaccharide biosynthesis C-terminal domain RIV7116_RS09845 PF01943 Polysaccharide biosynthesis protein RIV7116_RS09850 PF00535 Glycosyl transferase family 2 RIV7116_RS09855 PF00535 Glycosyl transferase family 2 RIV7116_RS09865 PF03808 Glycosyl transferase WecB/TagA/CpsF family RIV7116_RS09880 PF00535 Glycosyl transferase family 2 RIV7116_RS09890 PF00535 Glycosyl transferase family 2 RIV7116_RS09895 PF13439 Glycosyltransferase Family 4 RIV7116_RS09895 PF00534 Glycosyl transferases group 1 RIV7116_RS09910 PF00535 Glycosyl transferase family 2 RIV7116_RS09915 PF00534 Glycosyl transferases group 1 RIV7116_RS09935 PF00486 Transcriptional regulatory protein, C terminal RIV7116_RS09935 PF00072 Response regulator receiver domain RIV7116_RS09940 PF18698 Histidine kinase sensor domain RIV7116_RS09940 PF00512 His Kinase A (phospho-acceptor) domain RIV7116_RS09940 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RIV7116_RS09940 PF00672 HAMP domain RIV7116_RS09950 PF00072 Response regulator receiver domain RIV7116_RS09950 PF01627 Hpt domain RIV7116_RS09950 PF00486 Transcriptional regulatory protein, C terminal RIV7116_RS09965 PF09308 LuxQ, periplasmic RIV7116_RS09965 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RIV7116_RS09965 PF00512 His Kinase A (phospho-acceptor) domain RIV7116_RS09965 PF00072 Response regulator receiver domain RIV7116_RS09975 PF00999 Sodium/hydrogen exchanger family RIV7116_RS09980 PF01055 Glycosyl hydrolases family 31 RIV7116_RS09980 PF13802 Galactose mutarotase-like RIV7116_RS09980 PF16338 Domain of unknown function (DUF4968) RIV7116_RS09980 PF17137 Domain of unknown function (DUF5110) RIV7116_RS09985 PF00106 short chain dehydrogenase RIV7116_RS10010 PF00155 Aminotransferase class I and II RIV7116_RS10015 PF00326 Prolyl oligopeptidase family RIV7116_RS10025 PF00128 Alpha amylase, catalytic domain RIV7116_RS10030 PF00128 Alpha amylase, catalytic domain RIV7116_RS10030 PF11941 Domain of unknown function (DUF3459) RIV7116_RS10035 PF00128 Alpha amylase, catalytic domain RIV7116_RS10035 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) RIV7116_RS10040 PF16657 Maltogenic Amylase, C-terminal domain RIV7116_RS10040 PF00128 Alpha amylase, catalytic domain RIV7116_RS10045 PF02446 4-alpha-glucanotransferase RIV7116_RS10050 PF09557 Domain of unknown function (DUF2382) RIV7116_RS10050 PF05239 PRC-barrel domain RIV7116_RS10055 PF09557 Domain of unknown function (DUF2382) RIV7116_RS10055 PF05239 PRC-barrel domain RIV7116_RS10070 PF13847 Methyltransferase domain RIV7116_RS10080 PF02633 Creatinine amidohydrolase RIV7116_RS10105 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RIV7116_RS10105 PF08447 PAS fold RIV7116_RS10105 PF08448 PAS fold RIV7116_RS10135 PF00005 ABC transporter RIV7116_RS10225 PF00561 alpha/beta hydrolase fold RIV7116_RS10240 PF01797 Transposase IS200 like RIV7116_RS10255 PF03023 Lipid II flippase MurJ RIV7116_RS10265 PF03816 Cell envelope-related transcriptional attenuator domain RIV7116_RS10270 PF01050 Mannose-6-phosphate isomerase RIV7116_RS10270 PF00483 Nucleotidyl transferase RIV7116_RS10275 PF03109 ABC1 family RIV7116_RS10285 PF00005 ABC transporter RIV7116_RS10305 PF01593 Flavin containing amine oxidoreductase RIV7116_RS10320 PF00486 Transcriptional regulatory protein, C terminal RIV7116_RS10320 PF00072 Response regulator receiver domain RIV7116_RS10325 PF00999 Sodium/hydrogen exchanger family RIV7116_RS10330 PF00067 Cytochrome P450 RIV7116_RS10335 PF01593 Flavin containing amine oxidoreductase RIV7116_RS10355 PF02653 Branched-chain amino acid transport system / permease component RIV7116_RS10360 PF00005 ABC transporter RIV7116_RS10365 PF00485 Phosphoribulokinase / Uridine kinase family RIV7116_RS10370 PF02696 Uncharacterized ACR, YdiU/UPF0061 family RIV7116_RS10380 PF13302 Acetyltransferase (GNAT) domain RIV7116_RS10390 PF04055 Radical SAM superfamily RIV7116_RS10390 PF06968 Biotin and Thiamin Synthesis associated domain RIV7116_RS10395 PF05115 Cytochrome B6-F complex subunit VI (PetL) RIV7116_RS10400 PF01761 3-dehydroquinate synthase RIV7116_RS10415 PF02719 Polysaccharide biosynthesis protein RIV7116_RS10425 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family RIV7116_RS10435 PF02397 Bacterial sugar transferase RIV7116_RS10450 PF01370 NAD dependent epimerase/dehydratase family RIV7116_RS10455 PF13439 Glycosyltransferase Family 4 RIV7116_RS10455 PF00534 Glycosyl transferases group 1 RIV7116_RS10465 PF13439 Glycosyltransferase Family 4 RIV7116_RS10465 PF00534 Glycosyl transferases group 1 RIV7116_RS10485 PF05973 Phage derived protein Gp49-like (DUF891) RIV7116_RS10505 PF13614 AAA domain RIV7116_RS10530 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase RIV7116_RS10530 PF01799 [2Fe-2S] binding domain RIV7116_RS10530 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain RIV7116_RS10580 PF05593 RHS Repeat RIV7116_RS10580 PF03527 RHS protein RIV7116_RS10595 PF07993 Male sterility protein RIV7116_RS10595 PF00550 Phosphopantetheine attachment site RIV7116_RS10600 PF03060 Nitronate monooxygenase RIV7116_RS10600 PF00698 Acyl transferase domain RIV7116_RS10605 PF00109 Beta-ketoacyl synthase, N-terminal domain RIV7116_RS10605 PF16197 Ketoacyl-synthetase C-terminal extension RIV7116_RS10605 PF00698 Acyl transferase domain RIV7116_RS10605 PF00550 Phosphopantetheine attachment site RIV7116_RS10605 PF08659 KR domain RIV7116_RS10605 PF02801 Beta-ketoacyl synthase, C-terminal domain RIV7116_RS10610 PF00501 AMP-binding enzyme RIV7116_RS10610 PF13193 AMP-binding enzyme C-terminal domain RIV7116_RS10610 PF00668 Condensation domain RIV7116_RS10610 PF16197 Ketoacyl-synthetase C-terminal extension RIV7116_RS10610 PF00109 Beta-ketoacyl synthase, N-terminal domain RIV7116_RS10610 PF02801 Beta-ketoacyl synthase, C-terminal domain RIV7116_RS10610 PF00550 Phosphopantetheine attachment site RIV7116_RS10610 PF14765 Polyketide synthase dehydratase RIV7116_RS10610 PF08659 KR domain RIV7116_RS10620 PF08240 Alcohol dehydrogenase GroES-like domain RIV7116_RS10620 PF00698 Acyl transferase domain RIV7116_RS10620 PF16197 Ketoacyl-synthetase C-terminal extension RIV7116_RS10620 PF00550 Phosphopantetheine attachment site RIV7116_RS10620 PF08659 KR domain RIV7116_RS10620 PF14765 Polyketide synthase dehydratase RIV7116_RS10620 PF02801 Beta-ketoacyl synthase, C-terminal domain RIV7116_RS10620 PF00109 Beta-ketoacyl synthase, N-terminal domain RIV7116_RS10630 PF17762 HTH domain found in ParB protein RIV7116_RS10630 PF02195 ParB-like nuclease domain RIV7116_RS10645 PF01370 NAD dependent epimerase/dehydratase family RIV7116_RS10665 PF00534 Glycosyl transferases group 1 RIV7116_RS10665 PF13439 Glycosyltransferase Family 4 RIV7116_RS10670 PF00266 Aminotransferase class-V RIV7116_RS10690 PF07992 Pyridine nucleotide-disulphide oxidoreductase RIV7116_RS10695 PF00672 HAMP domain RIV7116_RS10695 PF18698 Histidine kinase sensor domain RIV7116_RS10695 PF00512 His Kinase A (phospho-acceptor) domain RIV7116_RS10695 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RIV7116_RS10695 PF00989 PAS fold RIV7116_RS10700 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RIV7116_RS10700 PF12282 Signal transduction histidine kinase RIV7116_RS10700 PF07568 Histidine kinase RIV7116_RS10705 PF01565 FAD binding domain RIV7116_RS10705 PF02913 FAD linked oxidases, C-terminal domain RIV7116_RS10710 PF02754 Cysteine-rich domain RIV7116_RS10710 PF13183 4Fe-4S dicluster domain RIV7116_RS10760 PF01381 Helix-turn-helix RIV7116_RS10775 PF18337 RapA N-terminal Tudor like domain RIV7116_RS10775 PF00176 SNF2 family N-terminal domain RIV7116_RS10775 PF00271 Helicase conserved C-terminal domain RIV7116_RS10775 PF12137 RNA polymerase recycling family C-terminal RIV7116_RS10775 PF18339 RapA N-terminal Tudor like domain 1 RIV7116_RS10785 PF01380 SIS domain RIV7116_RS10790 PF12838 4Fe-4S dicluster domain RIV7116_RS10800 PF00255 Glutathione peroxidase RIV7116_RS10830 PF05050 Methyltransferase FkbM domain RIV7116_RS10835 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RIV7116_RS10835 PF03466 LysR substrate binding domain RIV7116_RS10840 PF00578 AhpC/TSA family RIV7116_RS10845 PF01209 ubiE/COQ5 methyltransferase family RIV7116_RS10850 PF00395 S-layer homology domain RIV7116_RS10850 PF04966 Carbohydrate-selective porin, OprB family RIV7116_RS10855 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily RIV7116_RS10860 PF00440 Bacterial regulatory proteins, tetR family RIV7116_RS10870 PF13417 Glutathione S-transferase, N-terminal domain RIV7116_RS10885 PF01134 Glucose inhibited division protein A RIV7116_RS10910 PF01551 Peptidase family M23 RIV7116_RS10910 PF04225 Opacity-associated protein A LysM-like domain RIV7116_RS10925 PF01520 N-acetylmuramoyl-L-alanine amidase RIV7116_RS10930 PF05235 CHAD domain RIV7116_RS10930 PF01928 CYTH domain RIV7116_RS10945 PF00950 ABC 3 transport family RIV7116_RS10950 PF00005 ABC transporter RIV7116_RS10955 PF01297 Zinc-uptake complex component A periplasmic RIV7116_RS10960 PF00395 S-layer homology domain RIV7116_RS10960 PF04966 Carbohydrate-selective porin, OprB family RIV7116_RS10965 PF00490 Delta-aminolevulinic acid dehydratase RIV7116_RS10970 PF01227 GTP cyclohydrolase I RIV7116_RS10975 PF07683 Cobalamin synthesis protein cobW C-terminal domain RIV7116_RS10975 PF02492 CobW/HypB/UreG, nucleotide-binding domain RIV7116_RS10980 PF09190 DALR domain RIV7116_RS10980 PF01406 tRNA synthetases class I (C) catalytic domain RIV7116_RS10985 PF01551 Peptidase family M23 RIV7116_RS10990 PF01502 Phosphoribosyl-AMP cyclohydrolase RIV7116_RS11015 PF02492 CobW/HypB/UreG, nucleotide-binding domain RIV7116_RS11015 PF07683 Cobalamin synthesis protein cobW C-terminal domain RIV7116_RS11030 PF13195 Protein of unknown function (DUF4011) RIV7116_RS11030 PF13086 AAA domain RIV7116_RS11030 PF13087 AAA domain RIV7116_RS11030 PF13195 Protein of unknown function (DUF4011) RIV7116_RS11030 PF13086 AAA domain RIV7116_RS11030 PF13087 AAA domain RIV7116_RS11040 PF01022 Bacterial regulatory protein, arsR family RIV7116_RS11045 PF03129 Anticodon binding domain RIV7116_RS11045 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) RIV7116_RS11045 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain RIV7116_RS11060 PF07683 Cobalamin synthesis protein cobW C-terminal domain RIV7116_RS11060 PF02492 CobW/HypB/UreG, nucleotide-binding domain RIV7116_RS11065 PF09383 NIL domain RIV7116_RS11065 PF00005 ABC transporter RIV7116_RS11070 PF00085 Thioredoxin RIV7116_RS11075 PF01595 Cyclin M transmembrane N-terminal domain RIV7116_RS11075 PF00571 CBS domain RIV7116_RS11090 PF00145 C-5 cytosine-specific DNA methylase RIV7116_RS11095 PF04101 Glycosyltransferase family 28 C-terminal domain RIV7116_RS11095 PF03033 Glycosyltransferase family 28 N-terminal domain RIV7116_RS11105 PF00106 short chain dehydrogenase RIV7116_RS11115 PF00512 His Kinase A (phospho-acceptor) domain RIV7116_RS11115 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RIV7116_RS11115 PF02743 Cache domain RIV7116_RS11120 PF01740 STAS domain RIV7116_RS11125 PF00072 Response regulator receiver domain RIV7116_RS11125 PF00486 Transcriptional regulatory protein, C terminal RIV7116_RS11150 PF01494 FAD binding domain RIV7116_RS11160 PF00664 ABC transporter transmembrane region RIV7116_RS11160 PF00005 ABC transporter RIV7116_RS11195 PF05860 haemagglutination activity domain RIV7116_RS11200 PF05860 haemagglutination activity domain RIV7116_RS11205 PF05860 haemagglutination activity domain RIV7116_RS11220 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RIV7116_RS11220 PF09308 LuxQ, periplasmic RIV7116_RS11220 PF00072 Response regulator receiver domain RIV7116_RS11220 PF00512 His Kinase A (phospho-acceptor) domain RIV7116_RS11225 PF00072 Response regulator receiver domain RIV7116_RS11235 PF16921 Tex protein YqgF-like domain RIV7116_RS11235 PF00575 S1 RNA binding domain RIV7116_RS11235 PF09371 Tex-like protein N-terminal domain RIV7116_RS11235 PF17674 HHH domain RIV7116_RS11240 PF00294 pfkB family carbohydrate kinase RIV7116_RS11245 PF00111 2Fe-2S iron-sulfur cluster binding domain RIV7116_RS11250 PF04020 Mycobacterial 4 TMS phage holin, superfamily IV RIV7116_RS11265 PF13442 Cytochrome C oxidase, cbb3-type, subunit III RIV7116_RS11270 PF13614 AAA domain RIV7116_RS11285 PF00664 ABC transporter transmembrane region RIV7116_RS11285 PF00005 ABC transporter RIV7116_RS11310 PF00534 Glycosyl transferases group 1 RIV7116_RS11310 PF13439 Glycosyltransferase Family 4 RIV7116_RS11330 PF00535 Glycosyl transferase family 2 RIV7116_RS11345 PF01523 Putative modulator of DNA gyrase RIV7116_RS11360 PF03773 Predicted permease RIV7116_RS11390 PF00682 HMGL-like RIV7116_RS11390 PF08502 LeuA allosteric (dimerisation) domain RIV7116_RS11400 PF01266 FAD dependent oxidoreductase RIV7116_RS11400 PF05690 Thiazole biosynthesis protein ThiG RIV7116_RS11415 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase RIV7116_RS11415 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase RIV7116_RS11430 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit RIV7116_RS11440 PF01795 MraW methylase family RIV7116_RS11445 PF01339 CheB methylesterase RIV7116_RS11445 PF00072 Response regulator receiver domain RIV7116_RS11460 PF08352 Oligopeptide/dipeptide transporter, C-terminal region RIV7116_RS11460 PF00005 ABC transporter RIV7116_RS11465 PF00436 Single-strand binding protein family RIV7116_RS11475 PF03459 TOBE domain RIV7116_RS11475 PF00005 ABC transporter RIV7116_RS11475 PF17912 MalK OB fold domain RIV7116_RS11480 PF00483 Nucleotidyl transferase RIV7116_RS11505 PF18073 Rubredoxin metal binding domain RIV7116_RS11505 PF06745 KaiC RIV7116_RS11510 PF00072 Response regulator receiver domain RIV7116_RS11510 PF00486 Transcriptional regulatory protein, C terminal RIV7116_RS11545 PF00583 Acetyltransferase (GNAT) family RIV7116_RS11610 PF00717 Peptidase S24-like RIV7116_RS11610 PF01726 LexA DNA binding domain RIV7116_RS11615 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain RIV7116_RS11615 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain RIV7116_RS11635 PF00391 PEP-utilising enzyme, mobile domain RIV7116_RS11635 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain RIV7116_RS11655 PF01227 GTP cyclohydrolase I RIV7116_RS11690 PF13439 Glycosyltransferase Family 4 RIV7116_RS11690 PF00534 Glycosyl transferases group 1 RIV7116_RS11700 PF00032 Cytochrome b(C-terminal)/b6/petD RIV7116_RS11705 PF00033 Cytochrome b/b6/petB RIV7116_RS11710 PF03572 Peptidase family S41 RIV7116_RS11710 PF00595 PDZ domain RIV7116_RS11730 PF09367 CpeS-like protein RIV7116_RS11750 PF00156 Phosphoribosyl transferase domain RIV7116_RS11780 PF09559 Cas6 Crispr RIV7116_RS11800 PF08463 EcoEI R protein C-terminal RIV7116_RS11800 PF00271 Helicase conserved C-terminal domain RIV7116_RS11800 PF04851 Type III restriction enzyme, res subunit RIV7116_RS11800 PF13588 Type I restriction enzyme R protein N terminus (HSDR_N) RIV7116_RS11815 PF01420 Type I restriction modification DNA specificity domain RIV7116_RS11820 PF02384 N-6 DNA Methylase RIV7116_RS11820 PF12161 HsdM N-terminal domain RIV7116_RS11835 PF01348 Type II intron maturase RIV7116_RS11835 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) RIV7116_RS11855 PF00977 Histidine biosynthesis protein RIV7116_RS11860 PF17864 RuvB AAA lid domain RIV7116_RS11860 PF05491 RuvB C-terminal winged helix domain RIV7116_RS11860 PF05496 Holliday junction DNA helicase RuvB P-loop domain RIV7116_RS11885 PF04839 Plastid and cyanobacterial ribosomal protein (PSRP-3 / Ycf65) RIV7116_RS11915 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain RIV7116_RS11915 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain RIV7116_RS11920 PF02874 ATP synthase alpha/beta family, beta-barrel domain RIV7116_RS11920 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain RIV7116_RS11935 PF00664 ABC transporter transmembrane region RIV7116_RS11935 PF00005 ABC transporter RIV7116_RS11940 PF00300 Histidine phosphatase superfamily (branch 1) RIV7116_RS11945 PF01370 NAD dependent epimerase/dehydratase family RIV7116_RS11950 PF00486 Transcriptional regulatory protein, C terminal RIV7116_RS11950 PF00072 Response regulator receiver domain RIV7116_RS11955 PF01522 Polysaccharide deacetylase RIV7116_RS11960 PF00486 Transcriptional regulatory protein, C terminal RIV7116_RS11960 PF00072 Response regulator receiver domain RIV7116_RS11965 PF18719 ArlS sensor domain RIV7116_RS11965 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RIV7116_RS11965 PF00512 His Kinase A (phospho-acceptor) domain RIV7116_RS11970 PF13369 Transglutaminase-like superfamily RIV7116_RS11980 PF05552 Conserved TM helix RIV7116_RS11985 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal RIV7116_RS11985 PF01926 50S ribosome-binding GTPase RIV7116_RS11990 PF00121 Triosephosphate isomerase RIV7116_RS11995 PF00809 Pterin binding enzyme RIV7116_RS12000 PF01145 SPFH domain / Band 7 family RIV7116_RS12010 PF10531 SLBB domain RIV7116_RS12010 PF02563 Polysaccharide biosynthesis/export protein RIV7116_RS12010 PF18412 Outer-membrane lipoprotein Wza C-terminal domain RIV7116_RS12015 PF00005 ABC transporter RIV7116_RS12025 PF00144 Beta-lactamase RIV7116_RS12035 PF00400 WD domain, G-beta repeat RIV7116_RS12040 PF00475 Imidazoleglycerol-phosphate dehydratase RIV7116_RS12045 PF00072 Response regulator receiver domain RIV7116_RS12050 PF01627 Hpt domain RIV7116_RS12050 PF00672 HAMP domain RIV7116_RS12050 PF00072 Response regulator receiver domain RIV7116_RS12050 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) RIV7116_RS12050 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RIV7116_RS12050 PF00512 His Kinase A (phospho-acceptor) domain RIV7116_RS12055 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) RIV7116_RS12055 PF00072 Response regulator receiver domain RIV7116_RS12055 PF01627 Hpt domain RIV7116_RS12055 PF00512 His Kinase A (phospho-acceptor) domain RIV7116_RS12055 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RIV7116_RS12055 PF00672 HAMP domain RIV7116_RS12065 PF08448 PAS fold RIV7116_RS12065 PF01339 CheB methylesterase RIV7116_RS12065 PF01739 CheR methyltransferase, SAM binding domain RIV7116_RS12065 PF03705 CheR methyltransferase, all-alpha domain RIV7116_RS12075 PF00027 Cyclic nucleotide-binding domain RIV7116_RS12075 PF13545 Crp-like helix-turn-helix domain RIV7116_RS12080 PF11283 Protein of unknown function (DUF3084) RIV7116_RS12095 PF03725 3' exoribonuclease family, domain 2 RIV7116_RS12095 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain RIV7116_RS12095 PF00013 KH domain RIV7116_RS12095 PF00575 S1 RNA binding domain RIV7116_RS12095 PF01138 3' exoribonuclease family, domain 1 RIV7116_RS12105 PF00176 SNF2 family N-terminal domain RIV7116_RS12105 PF00271 Helicase conserved C-terminal domain RIV7116_RS12105 PF12419 SNF2 Helicase protein RIV7116_RS12110 PF04434 SWIM zinc finger RIV7116_RS12125 PF00421 Photosystem II protein RIV7116_RS12130 PF00124 Photosynthetic reaction centre protein RIV7116_RS12135 PF02392 Ycf4 RIV7116_RS12140 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD RIV7116_RS12145 PF02801 Beta-ketoacyl synthase, C-terminal domain RIV7116_RS12145 PF00109 Beta-ketoacyl synthase, N-terminal domain RIV7116_RS12150 PF03092 BT1 family RIV7116_RS12155 PF03055 Retinal pigment epithelial membrane protein RIV7116_RS12165 PF04055 Radical SAM superfamily RIV7116_RS12165 PF06969 HemN C-terminal domain RIV7116_RS12170 PF01126 Heme oxygenase RIV7116_RS12185 PF02915 Rubrerythrin RIV7116_RS12190 PF00067 Cytochrome P450 RIV7116_RS12195 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain RIV7116_RS12195 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase RIV7116_RS12225 PF03775 Septum formation inhibitor MinC, C-terminal domain RIV7116_RS12230 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain RIV7116_RS12235 PF03776 Septum formation topological specificity factor MinE RIV7116_RS12245 PF02911 Formyl transferase, C-terminal domain RIV7116_RS12245 PF00551 Formyl transferase RIV7116_RS12265 PF05221 S-adenosyl-L-homocysteine hydrolase RIV7116_RS12265 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain RIV7116_RS12270 PF00924 Mechanosensitive ion channel RIV7116_RS12285 PF00534 Glycosyl transferases group 1 RIV7116_RS12285 PF13439 Glycosyltransferase Family 4 RIV7116_RS12295 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain RIV7116_RS12295 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain RIV7116_RS12305 PF00085 Thioredoxin RIV7116_RS12315 PF00571 CBS domain RIV7116_RS12315 PF00478 IMP dehydrogenase / GMP reductase domain RIV7116_RS12320 PF03448 MgtE intracellular N domain RIV7116_RS12320 PF00571 CBS domain RIV7116_RS12320 PF01769 Divalent cation transporter RIV7116_RS12335 PF00483 Nucleotidyl transferase RIV7116_RS12345 PF01618 MotA/TolQ/ExbB proton channel family RIV7116_RS12350 PF02472 Biopolymer transport protein ExbD/TolR RIV7116_RS12360 PF11264 Thylakoid formation protein RIV7116_RS12365 PF06206 CpeT/CpcT family (DUF1001) RIV7116_RS12370 PF01740 STAS domain RIV7116_RS12375 PF01218 Coproporphyrinogen III oxidase RIV7116_RS12385 PF10609 NUBPL iron-transfer P-loop NTPase RIV7116_RS12385 PF01883 Iron-sulfur cluster assembly protein RIV7116_RS12390 PF01098 Cell cycle protein RIV7116_RS12405 PF00582 Universal stress protein family RIV7116_RS12405 PF00999 Sodium/hydrogen exchanger family RIV7116_RS12410 PF16363 GDP-mannose 4,6 dehydratase RIV7116_RS12415 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain RIV7116_RS12415 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain RIV7116_RS12415 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain RIV7116_RS12420 PF13520 Amino acid permease RIV7116_RS12430 PF18146 Damage-inducible protein CinA KH domain RIV7116_RS12430 PF00994 Probable molybdopterin binding domain RIV7116_RS12430 PF02464 Competence-damaged protein RIV7116_RS12435 PF08676 MutL C terminal dimerisation domain RIV7116_RS12435 PF01119 DNA mismatch repair protein, C-terminal domain RIV7116_RS12445 PF00512 His Kinase A (phospho-acceptor) domain RIV7116_RS12445 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RIV7116_RS12445 PF13188 PAS domain RIV7116_RS12445 PF00072 Response regulator receiver domain RIV7116_RS12445 PF08448 PAS fold RIV7116_RS12450 PF00709 Adenylosuccinate synthetase RIV7116_RS12455 PF01386 Ribosomal L25p family RIV7116_RS12455 PF14693 Ribosomal protein TL5, C-terminal domain RIV7116_RS12480 PF02941 Ferredoxin thioredoxin reductase variable alpha chain RIV7116_RS12495 PF01145 SPFH domain / Band 7 family RIV7116_RS12500 PF01475 Ferric uptake regulator family RIV7116_RS12505 PF02700 Phosphoribosylformylglycinamidine (FGAM) synthase RIV7116_RS12515 PF00400 WD domain, G-beta repeat RIV7116_RS12515 PF12894 Anaphase-promoting complex subunit 4 WD40 domain RIV7116_RS12560 PF02531 PsaD RIV7116_RS12565 PF00512 His Kinase A (phospho-acceptor) domain RIV7116_RS12565 PF00672 HAMP domain RIV7116_RS12565 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RIV7116_RS12565 PF13426 PAS domain RIV7116_RS12570 PF13439 Glycosyltransferase Family 4 RIV7116_RS12570 PF00534 Glycosyl transferases group 1 RIV7116_RS12585 PF03129 Anticodon binding domain RIV7116_RS12585 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain RIV7116_RS12585 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) RIV7116_RS12600 PF00361 Proton-conducting membrane transporter RIV7116_RS12610 PF00288 GHMP kinases N terminal domain RIV7116_RS12610 PF08544 GHMP kinases C terminal RIV7116_RS12620 PF01434 Peptidase family M41 RIV7116_RS12620 PF17862 AAA+ lid domain RIV7116_RS12620 PF00004 ATPase family associated with various cellular activities (AAA) RIV7116_RS12630 PF01370 NAD dependent epimerase/dehydratase family RIV7116_RS12635 PF13439 Glycosyltransferase Family 4 RIV7116_RS12635 PF00534 Glycosyl transferases group 1 RIV7116_RS12640 PF00211 Adenylate and Guanylate cyclase catalytic domain RIV7116_RS12650 PF01259 SAICAR synthetase RIV7116_RS12655 PF01103 Surface antigen RIV7116_RS12655 PF07244 Surface antigen variable number repeat RIV7116_RS12660 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase RIV7116_RS12665 PF07977 FabA-like domain RIV7116_RS12670 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 RIV7116_RS12670 PF00132 Bacterial transferase hexapeptide (six repeats) RIV7116_RS12675 PF02684 Lipid-A-disaccharide synthetase RIV7116_RS12680 PF00248 Aldo/keto reductase family RIV7116_RS12700 PF00581 Rhodanese-like domain RIV7116_RS12705 PF04493 Endonuclease V RIV7116_RS12750 PF11909 NADH-quinone oxidoreductase cyanobacterial subunit N RIV7116_RS12755 PF00297 Ribosomal protein L3 RIV7116_RS12760 PF00573 Ribosomal protein L4/L1 family RIV7116_RS12765 PF00276 Ribosomal protein L23 RIV7116_RS12770 PF03947 Ribosomal Proteins L2, C-terminal domain RIV7116_RS12770 PF00181 Ribosomal Proteins L2, RNA binding domain RIV7116_RS12775 PF00203 Ribosomal protein S19 RIV7116_RS12780 PF00237 Ribosomal protein L22p/L17e RIV7116_RS12785 PF00189 Ribosomal protein S3, C-terminal domain RIV7116_RS12785 PF07650 KH domain RIV7116_RS12790 PF00252 Ribosomal protein L16p/L10e RIV7116_RS12795 PF00831 Ribosomal L29 protein RIV7116_RS12800 PF00366 Ribosomal protein S17 RIV7116_RS12805 PF00238 Ribosomal protein L14p/L23e RIV7116_RS12810 PF00467 KOW motif RIV7116_RS12810 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 RIV7116_RS12815 PF00281 Ribosomal protein L5 RIV7116_RS12815 PF00673 ribosomal L5P family C-terminus RIV7116_RS12820 PF00410 Ribosomal protein S8 RIV7116_RS12825 PF00347 Ribosomal protein L6 RIV7116_RS12830 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast RIV7116_RS12835 PF00333 Ribosomal protein S5, N-terminal domain RIV7116_RS12835 PF03719 Ribosomal protein S5, C-terminal domain RIV7116_RS12840 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A RIV7116_RS12845 PF00344 SecY translocase RIV7116_RS12855 PF01176 Translation initiation factor 1A / IF-1 RIV7116_RS12860 PF00416 Ribosomal protein S13/S18 RIV7116_RS12865 PF00411 Ribosomal protein S11 RIV7116_RS12870 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain RIV7116_RS12870 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain RIV7116_RS12870 PF01000 RNA polymerase Rpb3/RpoA insert domain RIV7116_RS12875 PF01196 Ribosomal protein L17 RIV7116_RS12880 PF01416 tRNA pseudouridine synthase RIV7116_RS12885 PF00572 Ribosomal protein L13 RIV7116_RS12890 PF00380 Ribosomal protein S9/S16 RIV7116_RS12895 PF01197 Ribosomal protein L31 RIV7116_RS12900 PF00472 RF-1 domain RIV7116_RS12900 PF03462 PCRF domain RIV7116_RS12915 PF01381 Helix-turn-helix RIV7116_RS12920 PF16326 ABC transporter C-terminal domain RIV7116_RS12920 PF00005 ABC transporter RIV7116_RS12920 PF12848 ABC transporter RIV7116_RS12925 PF01676 Metalloenzyme superfamily RIV7116_RS12925 PF06415 BPG-independent PGAM N-terminus (iPGM_N) RIV7116_RS12945 PF00730 HhH-GPD superfamily base excision DNA repair protein RIV7116_RS12945 PF00633 Helix-hairpin-helix motif RIV7116_RS12945 PF14815 NUDIX domain RIV7116_RS12950 PF00534 Glycosyl transferases group 1 RIV7116_RS12950 PF13439 Glycosyltransferase Family 4 RIV7116_RS12960 PF02565 Recombination protein O C terminal RIV7116_RS12960 PF11967 Recombination protein O N terminal RIV7116_RS12965 PF01791 DeoC/LacD family aldolase RIV7116_RS13005 PF00534 Glycosyl transferases group 1 RIV7116_RS13005 PF13579 Glycosyl transferase 4-like domain RIV7116_RS13010 PF02397 Bacterial sugar transferase RIV7116_RS13015 PF04055 Radical SAM superfamily RIV7116_RS13020 PF11780 Protein of unknown function (DUF3318) RIV7116_RS13035 PF00148 Nitrogenase component 1 type Oxidoreductase RIV7116_RS13045 PF00142 4Fe-4S iron sulfur cluster binding proteins, NifH/frxC family RIV7116_RS13055 PF10431 C-terminal, D2-small domain, of ClpB protein RIV7116_RS13055 PF00004 ATPase family associated with various cellular activities (AAA) RIV7116_RS13055 PF02861 Clp amino terminal domain, pathogenicity island component RIV7116_RS13055 PF17871 AAA lid domain RIV7116_RS13055 PF07724 AAA domain (Cdc48 subfamily) RIV7116_RS13060 PF00805 Pentapeptide repeats (8 copies) RIV7116_RS13060 PF00069 Protein kinase domain RIV7116_RS13100 PF04336 Acyl carrier protein phosphodiesterase RIV7116_RS13115 PF00586 AIR synthase related protein, N-terminal domain RIV7116_RS13115 PF02769 AIR synthase related protein, C-terminal domain RIV7116_RS13125 PF10502 Signal peptidase, peptidase S26 RIV7116_RS13130 PF09055 Nickel-containing superoxide dismutase RIV7116_RS13135 PF02569 Pantoate-beta-alanine ligase RIV7116_RS13135 PF02224 Cytidylate kinase RIV7116_RS13140 PF03330 Lytic transglycolase RIV7116_RS13145 PF02638 Glycosyl hydrolase-like 10 RIV7116_RS13155 PF07670 Nucleoside recognition RIV7116_RS13155 PF01773 Na+ dependent nucleoside transporter N-terminus RIV7116_RS13155 PF07662 Na+ dependent nucleoside transporter C-terminus RIV7116_RS13160 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RIV7116_RS13160 PF00512 His Kinase A (phospho-acceptor) domain RIV7116_RS13160 PF00497 Bacterial extracellular solute-binding proteins, family 3 RIV7116_RS13165 PF11849 Domain of unknown function (DUF3369) RIV7116_RS13175 PF01979 Amidohydrolase family RIV7116_RS13180 PF00857 Isochorismatase family RIV7116_RS13195 PF13840 ACT domain RIV7116_RS13195 PF00696 Amino acid kinase family RIV7116_RS13200 PF00196 Bacterial regulatory proteins, luxR family RIV7116_RS13200 PF00072 Response regulator receiver domain RIV7116_RS13215 PF00072 Response regulator receiver domain RIV7116_RS13220 PF00672 HAMP domain RIV7116_RS13220 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RIV7116_RS13220 PF00512 His Kinase A (phospho-acceptor) domain RIV7116_RS13220 PF01627 Hpt domain RIV7116_RS13220 PF00072 Response regulator receiver domain RIV7116_RS13220 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) RIV7116_RS13225 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RIV7116_RS13225 PF00512 His Kinase A (phospho-acceptor) domain RIV7116_RS13225 PF01627 Hpt domain RIV7116_RS13225 PF00072 Response regulator receiver domain RIV7116_RS13225 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) RIV7116_RS13225 PF00672 HAMP domain RIV7116_RS13245 PF04226 Transglycosylase associated protein RIV7116_RS13270 PF05532 CsbD-like RIV7116_RS13280 PF01699 Sodium/calcium exchanger protein RIV7116_RS13290 PF18698 Histidine kinase sensor domain RIV7116_RS13290 PF00989 PAS fold RIV7116_RS13290 PF00512 His Kinase A (phospho-acceptor) domain RIV7116_RS13290 PF00672 HAMP domain RIV7116_RS13290 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RIV7116_RS13295 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RIV7116_RS13295 PF18415 Histidine kinase receptor ArcB trans-membrane domain RIV7116_RS13295 PF00512 His Kinase A (phospho-acceptor) domain RIV7116_RS13295 PF00072 Response regulator receiver domain RIV7116_RS13295 PF00989 PAS fold RIV7116_RS13295 PF01627 Hpt domain RIV7116_RS13300 PF00072 Response regulator receiver domain RIV7116_RS13315 PF00582 Universal stress protein family RIV7116_RS13325 PF02386 Cation transport protein RIV7116_RS13330 PF05067 Manganese containing catalase RIV7116_RS13335 PF02142 MGS-like domain RIV7116_RS13335 PF00781 Diacylglycerol kinase catalytic domain RIV7116_RS13340 PF07992 Pyridine nucleotide-disulphide oxidoreductase RIV7116_RS13340 PF14759 Reductase C-terminal RIV7116_RS13360 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases RIV7116_RS13380 PF00805 Pentapeptide repeats (8 copies) RIV7116_RS13380 PF00069 Protein kinase domain RIV7116_RS13400 PF01842 ACT domain RIV7116_RS13400 PF02153 Prephenate dehydrogenase RIV7116_RS13420 PF18152 DAHP synthase ferredoxin-like domain RIV7116_RS13420 PF00793 DAHP synthetase I family RIV7116_RS13430 PF00312 Ribosomal protein S15 RIV7116_RS13440 PF00484 Carbonic anhydrase RIV7116_RS13455 PF00561 alpha/beta hydrolase fold RIV7116_RS13460 PF00579 tRNA synthetases class I (W and Y) RIV7116_RS13485 PF00361 Proton-conducting membrane transporter RIV7116_RS13490 PF01010 NADH-dehyrogenase subunit F, TMs, (complex I) C-terminus RIV7116_RS13490 PF00361 Proton-conducting membrane transporter RIV7116_RS13490 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus RIV7116_RS13495 PF00936 BMC domain RIV7116_RS13500 PF00936 BMC domain RIV7116_RS13505 PF03319 Ethanolamine utilisation protein EutN/carboxysome RIV7116_RS13510 PF00101 Ribulose bisphosphate carboxylase, small chain RIV7116_RS13510 PF00132 Bacterial transferase hexapeptide (six repeats) RIV7116_RS13520 PF00936 BMC domain RIV7116_RS13525 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RIV7116_RS13525 PF03466 LysR substrate binding domain RIV7116_RS13565 PF17862 AAA+ lid domain RIV7116_RS13565 PF06480 FtsH Extracellular RIV7116_RS13565 PF00004 ATPase family associated with various cellular activities (AAA) RIV7116_RS13565 PF01434 Peptidase family M41 RIV7116_RS13570 PF17820 PDZ domain RIV7116_RS13570 PF03572 Peptidase family S41 RIV7116_RS13570 PF01471 Putative peptidoglycan binding domain RIV7116_RS13590 PF00082 Subtilase family RIV7116_RS13600 PF00483 Nucleotidyl transferase RIV7116_RS13605 PF00226 DnaJ domain RIV7116_RS13605 PF01556 DnaJ C terminal domain RIV7116_RS13615 PF00578 AhpC/TSA family RIV7116_RS13615 PF10417 C-terminal domain of 1-Cys peroxiredoxin RIV7116_RS13635 PF01551 Peptidase family M23 RIV7116_RS13640 PF00588 SpoU rRNA Methylase family RIV7116_RS13645 PF04107 Glutamate-cysteine ligase family 2(GCS2) RIV7116_RS13650 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RIV7116_RS13650 PF00512 His Kinase A (phospho-acceptor) domain RIV7116_RS13650 PF07689 KaiB domain RIV7116_RS13665 PF00171 Aldehyde dehydrogenase family RIV7116_RS13675 PF08240 Alcohol dehydrogenase GroES-like domain RIV7116_RS13675 PF00107 Zinc-binding dehydrogenase RIV7116_RS13685 PF00580 UvrD/REP helicase N-terminal domain RIV7116_RS13685 PF13361 UvrD-like helicase C-terminal domain RIV7116_RS13700 PF00072 Response regulator receiver domain RIV7116_RS13700 PF09308 LuxQ, periplasmic RIV7116_RS13700 PF00512 His Kinase A (phospho-acceptor) domain RIV7116_RS13700 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RIV7116_RS13705 PF02773 S-adenosylmethionine synthetase, C-terminal domain RIV7116_RS13705 PF02772 S-adenosylmethionine synthetase, central domain RIV7116_RS13705 PF00438 S-adenosylmethionine synthetase, N-terminal domain RIV7116_RS13710 PF00485 Phosphoribulokinase / Uridine kinase family RIV7116_RS13715 PF01383 CpcD/allophycocyanin linker domain RIV7116_RS13715 PF00175 Oxidoreductase NAD-binding domain RIV7116_RS13720 PF03447 Homoserine dehydrogenase, NAD binding domain RIV7116_RS13720 PF00742 Homoserine dehydrogenase RIV7116_RS13720 PF01842 ACT domain RIV7116_RS13725 PF00395 S-layer homology domain RIV7116_RS13725 PF00963 Cohesin domain RIV7116_RS13730 PF00749 tRNA synthetases class I (E and Q), catalytic domain RIV7116_RS13730 PF14159 CAAD domains of cyanobacterial aminoacyl-tRNA synthetase RIV7116_RS13760 PF12894 Anaphase-promoting complex subunit 4 WD40 domain RIV7116_RS13760 PF00400 WD domain, G-beta repeat RIV7116_RS13770 PF13180 PDZ domain RIV7116_RS13780 PF13180 PDZ domain RIV7116_RS13785 PF03055 Retinal pigment epithelial membrane protein RIV7116_RS13790 PF00501 AMP-binding enzyme RIV7116_RS13805 PF02817 e3 binding domain RIV7116_RS13805 PF00364 Biotin-requiring enzyme RIV7116_RS13805 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) RIV7116_RS13810 PF01734 Patatin-like phospholipase RIV7116_RS13815 PF01161 Phosphatidylethanolamine-binding protein RIV7116_RS13835 PF13785 Domain of unknown function (DUF4178) RIV7116_RS13865 PF01209 ubiE/COQ5 methyltransferase family RIV7116_RS13880 PF03330 Lytic transglycolase RIV7116_RS13885 PF00924 Mechanosensitive ion channel RIV7116_RS13890 PF13847 Methyltransferase domain RIV7116_RS13900 PF01139 tRNA-splicing ligase RtcB RIV7116_RS13900 PF01139 tRNA-splicing ligase RtcB RIV7116_RS13905 PF01209 ubiE/COQ5 methyltransferase family RIV7116_RS13910 PF13419 Haloacid dehalogenase-like hydrolase RIV7116_RS13920 PF01209 ubiE/COQ5 methyltransferase family RIV7116_RS13925 PF13649 Methyltransferase domain RIV7116_RS13935 PF13411 MerR HTH family regulatory protein RIV7116_RS13955 PF15919 HicB_like antitoxin of bacterial toxin-antitoxin system RIV7116_RS14020 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain RIV7116_RS14020 PF07992 Pyridine nucleotide-disulphide oxidoreductase RIV7116_RS14025 PF00400 WD domain, G-beta repeat RIV7116_RS14025 PF05729 NACHT domain RIV7116_RS14025 PF00805 Pentapeptide repeats (8 copies) RIV7116_RS14025 PF00400 WD domain, G-beta repeat RIV7116_RS14025 PF05729 NACHT domain RIV7116_RS14025 PF00805 Pentapeptide repeats (8 copies) RIV7116_RS14100 PF11808 Phosphate regulon sensor protein PhoR RIV7116_RS14100 PF00989 PAS fold RIV7116_RS14100 PF00512 His Kinase A (phospho-acceptor) domain RIV7116_RS14100 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RIV7116_RS14105 PF00072 Response regulator receiver domain RIV7116_RS14105 PF00486 Transcriptional regulatory protein, C terminal RIV7116_RS14115 PF00873 AcrB/AcrD/AcrF family RIV7116_RS14130 PF00772 DnaB-like helicase N terminal domain RIV7116_RS14130 PF14528 LAGLIDADG-like domain RIV7116_RS14130 PF03796 DnaB-like helicase C terminal domain RIV7116_RS14145 PF00072 Response regulator receiver domain RIV7116_RS14145 PF00196 Bacterial regulatory proteins, luxR family RIV7116_RS14150 PF07730 Histidine kinase RIV7116_RS14160 PF04116 Fatty acid hydroxylase superfamily RIV7116_RS14165 PF00873 AcrB/AcrD/AcrF family RIV7116_RS14190 PF00440 Bacterial regulatory proteins, tetR family RIV7116_RS14190 PF16925 Tetracyclin repressor-like, C-terminal domain RIV7116_RS14195 PF14525 AraC-binding-like domain RIV7116_RS14195 PF12833 Helix-turn-helix domain RIV7116_RS14205 PF08681 Protein of unknown function (DUF1778) RIV7116_RS14210 PF03633 Glycosyl hydrolase family 65, C-terminal domain RIV7116_RS14210 PF03636 Glycosyl hydrolase family 65, N-terminal domain RIV7116_RS14210 PF03632 Glycosyl hydrolase family 65 central catalytic domain RIV7116_RS14220 PF00132 Bacterial transferase hexapeptide (six repeats) RIV7116_RS14230 PF08241 Methyltransferase domain RIV7116_RS14235 PF01070 FMN-dependent dehydrogenase RIV7116_RS14240 PF00994 Probable molybdopterin binding domain RIV7116_RS14255 PF07992 Pyridine nucleotide-disulphide oxidoreductase RIV7116_RS14260 PF11799 impB/mucB/samB family C-terminal domain RIV7116_RS14260 PF11798 IMS family HHH motif RIV7116_RS14260 PF00817 impB/mucB/samB family RIV7116_RS14280 PF00248 Aldo/keto reductase family RIV7116_RS14285 PF04966 Carbohydrate-selective porin, OprB family RIV7116_RS14285 PF00395 S-layer homology domain RIV7116_RS14375 PF00258 Flavodoxin RIV7116_RS14385 PF00201 UDP-glucoronosyl and UDP-glucosyl transferase RIV7116_RS14385 PF00201 UDP-glucoronosyl and UDP-glucosyl transferase RIV7116_RS14390 PF00403 Heavy-metal-associated domain RIV7116_RS14395 PF03781 Sulfatase-modifying factor enzyme 1 RIV7116_RS14400 PF03781 Sulfatase-modifying factor enzyme 1 RIV7116_RS14400 PF00069 Protein kinase domain RIV7116_RS14425 PF00067 Cytochrome P450 RIV7116_RS14430 PF01425 Amidase RIV7116_RS14440 PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system RIV7116_RS14445 PF06769 YoeB-like toxin of bacterial type II toxin-antitoxin system RIV7116_RS14450 PF00067 Cytochrome P450 RIV7116_RS14455 PF03816 Cell envelope-related transcriptional attenuator domain RIV7116_RS14460 PF01494 FAD binding domain RIV7116_RS14465 PF00440 Bacterial regulatory proteins, tetR family RIV7116_RS14465 PF17938 Tetracyclin repressor-like, C-terminal domain RIV7116_RS14470 PF08362 YcdC-like protein, C-terminal region RIV7116_RS14470 PF00440 Bacterial regulatory proteins, tetR family RIV7116_RS14480 PF01820 D-ala D-ala ligase N-terminus RIV7116_RS14480 PF07478 D-ala D-ala ligase C-terminus RIV7116_RS14490 PF01425 Amidase RIV7116_RS14550 PF00950 ABC 3 transport family RIV7116_RS14555 PF00005 ABC transporter RIV7116_RS14560 PF01297 Zinc-uptake complex component A periplasmic RIV7116_RS14580 PF02333 Phytase RIV7116_RS14595 PF00011 Hsp20/alpha crystallin family RIV7116_RS14600 PF00486 Transcriptional regulatory protein, C terminal RIV7116_RS14600 PF00072 Response regulator receiver domain RIV7116_RS14610 PF00582 Universal stress protein family RIV7116_RS14625 PF00582 Universal stress protein family RIV7116_RS14640 PF00753 Metallo-beta-lactamase superfamily RIV7116_RS14650 PF08448 PAS fold RIV7116_RS14650 PF13188 PAS domain RIV7116_RS14650 PF00072 Response regulator receiver domain RIV7116_RS14650 PF00512 His Kinase A (phospho-acceptor) domain RIV7116_RS14650 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RIV7116_RS14655 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion RIV7116_RS14660 PF01593 Flavin containing amine oxidoreductase RIV7116_RS14660 PF02027 RolB/RolC glucosidase family RIV7116_RS14665 PF01494 FAD binding domain RIV7116_RS14675 PF00753 Metallo-beta-lactamase superfamily RIV7116_RS14675 PF16123 Hydroxyacylglutathione hydrolase C-terminus RIV7116_RS14685 PF00005 ABC transporter RIV7116_RS14690 PF13194 Domain of unknown function (DUF4010) RIV7116_RS14725 PF02887 Pyruvate kinase, alpha/beta domain RIV7116_RS14725 PF00224 Pyruvate kinase, barrel domain RIV7116_RS14740 PF00582 Universal stress protein family RIV7116_RS14745 PF00690 Cation transporter/ATPase, N-terminus RIV7116_RS14745 PF00689 Cation transporting ATPase, C-terminus RIV7116_RS14750 PF00196 Bacterial regulatory proteins, luxR family RIV7116_RS14750 PF00072 Response regulator receiver domain RIV7116_RS14800 PF08479 POTRA domain, ShlB-type RIV7116_RS14800 PF17287 POTRA domain RIV7116_RS14800 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB RIV7116_RS14830 PF00072 Response regulator receiver domain RIV7116_RS14830 PF00158 Sigma-54 interaction domain RIV7116_RS14830 PF02954 Bacterial regulatory protein, Fis family RIV7116_RS14870 PF00221 Aromatic amino acid lyase RIV7116_RS14875 PF00501 AMP-binding enzyme RIV7116_RS14875 PF13193 AMP-binding enzyme C-terminal domain RIV7116_RS14880 PF00205 Thiamine pyrophosphate enzyme, central domain RIV7116_RS14880 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain RIV7116_RS14880 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain RIV7116_RS14885 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal RIV7116_RS14885 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III RIV7116_RS14905 PF01817 Chorismate mutase type II RIV7116_RS14905 PF02153 Prephenate dehydrogenase RIV7116_RS14910 PF00005 ABC transporter RIV7116_RS14910 PF00664 ABC transporter transmembrane region RIV7116_RS14915 PF00664 ABC transporter transmembrane region RIV7116_RS14915 PF00005 ABC transporter RIV7116_RS14920 PF00005 ABC transporter RIV7116_RS14925 PF02687 FtsX-like permease family RIV7116_RS14925 PF12704 MacB-like periplasmic core domain RIV7116_RS14925 PF00005 ABC transporter RIV7116_RS14935 PF00128 Alpha amylase, catalytic domain RIV7116_RS14940 PF00871 Acetokinase family RIV7116_RS14950 PF00211 Adenylate and Guanylate cyclase catalytic domain RIV7116_RS14965 PF00145 C-5 cytosine-specific DNA methylase RIV7116_RS14975 PF00963 Cohesin domain RIV7116_RS14975 PF00395 S-layer homology domain RIV7116_RS14980 PF00520 Ion transport protein RIV7116_RS14980 PF00027 Cyclic nucleotide-binding domain RIV7116_RS14990 PF00196 Bacterial regulatory proteins, luxR family RIV7116_RS14990 PF00072 Response regulator receiver domain RIV7116_RS14995 PF07730 Histidine kinase RIV7116_RS15020 PF01903 CbiX RIV7116_RS15035 PF00578 AhpC/TSA family RIV7116_RS15045 PF03976 Polyphosphate kinase 2 (PPK2) RIV7116_RS15065 PF14251 Domain of unknown function (DUF4346) RIV7116_RS15075 PF01872 RibD C-terminal domain RIV7116_RS15080 PF00512 His Kinase A (phospho-acceptor) domain RIV7116_RS15080 PF09308 LuxQ, periplasmic RIV7116_RS15080 PF00072 Response regulator receiver domain RIV7116_RS15080 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RIV7116_RS15090 PF00636 Ribonuclease III domain RIV7116_RS15090 PF00035 Double-stranded RNA binding motif RIV7116_RS15100 PF01544 CorA-like Mg2+ transporter protein RIV7116_RS15110 PF07730 Histidine kinase RIV7116_RS15120 PF00581 Rhodanese-like domain RIV7116_RS15125 PF00072 Response regulator receiver domain RIV7116_RS15125 PF00196 Bacterial regulatory proteins, luxR family RIV7116_RS15130 PF00118 TCP-1/cpn60 chaperonin family RIV7116_RS15135 PF00953 Glycosyl transferase family 4 RIV7116_RS15150 PF08719 Domain of unknown function (DUF1768) RIV7116_RS15165 PF00072 Response regulator receiver domain RIV7116_RS15165 PF13188 PAS domain RIV7116_RS15165 PF08448 PAS fold RIV7116_RS15165 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RIV7116_RS15165 PF00512 His Kinase A (phospho-acceptor) domain RIV7116_RS15185 PF16363 GDP-mannose 4,6 dehydratase RIV7116_RS15195 PF00664 ABC transporter transmembrane region RIV7116_RS15195 PF00005 ABC transporter RIV7116_RS15200 PF02397 Bacterial sugar transferase RIV7116_RS15210 PF01975 Survival protein SurE RIV7116_RS15215 PF09150 Orange carotenoid protein, N-terminal RIV7116_RS15235 PF00474 Sodium:solute symporter family RIV7116_RS15240 PF02814 UreE urease accessory protein, N-terminal domain RIV7116_RS15240 PF05194 UreE urease accessory protein, C-terminal domain RIV7116_RS15245 PF01730 UreF RIV7116_RS15250 PF02492 CobW/HypB/UreG, nucleotide-binding domain RIV7116_RS15265 PF03069 Acetamidase/Formamidase family RIV7116_RS15265 PF03069 Acetamidase/Formamidase family RIV7116_RS15270 PF01925 Sulfite exporter TauE/SafE RIV7116_RS15285 PF04483 Protein of unknown function (DUF565) RIV7116_RS15290 PF02366 Dolichyl-phosphate-mannose-protein mannosyltransferase RIV7116_RS15295 PF00512 His Kinase A (phospho-acceptor) domain RIV7116_RS15295 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RIV7116_RS15300 PF07688 KaiA C-terminal domain RIV7116_RS15305 PF07689 KaiB domain RIV7116_RS15310 PF06745 KaiC RIV7116_RS15335 PF15919 HicB_like antitoxin of bacterial toxin-antitoxin system RIV7116_RS15360 PF11965 Domain of unknown function (DUF3479) RIV7116_RS15360 PF02514 CobN/Magnesium Chelatase RIV7116_RS15390 PF00459 Inositol monophosphatase family RIV7116_RS15410 PF00004 ATPase family associated with various cellular activities (AAA) RIV7116_RS15410 PF01434 Peptidase family M41 RIV7116_RS15410 PF17862 AAA+ lid domain RIV7116_RS15415 PF03358 NADPH-dependent FMN reductase RIV7116_RS15425 PF05195 Aminopeptidase P, N-terminal domain RIV7116_RS15425 PF00557 Metallopeptidase family M24 RIV7116_RS15430 PF01757 Acyltransferase family RIV7116_RS15445 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) RIV7116_RS15455 PF03793 PASTA domain RIV7116_RS15455 PF00069 Protein kinase domain RIV7116_RS15470 PF01594 AI-2E family transporter RIV7116_RS15500 PF01554 MatE RIV7116_RS15510 PF13411 MerR HTH family regulatory protein RIV7116_RS15520 PF13614 AAA domain RIV7116_RS15570 PF00512 His Kinase A (phospho-acceptor) domain RIV7116_RS15570 PF16736 Single Cache-like RIV7116_RS15570 PF00989 PAS fold RIV7116_RS15570 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RIV7116_RS15575 PF00486 Transcriptional regulatory protein, C terminal RIV7116_RS15575 PF00072 Response regulator receiver domain RIV7116_RS15600 PF18317 Shikimate 5'-dehydrogenase C-terminal domain RIV7116_RS15600 PF08501 Shikimate dehydrogenase substrate binding domain RIV7116_RS15605 PF01740 STAS domain RIV7116_RS15605 PF00916 Sulfate permease family RIV7116_RS15610 PF00999 Sodium/hydrogen exchanger family RIV7116_RS15615 PF00582 Universal stress protein family RIV7116_RS15615 PF00999 Sodium/hydrogen exchanger family RIV7116_RS15635 PF00732 GMC oxidoreductase RIV7116_RS15635 PF05199 GMC oxidoreductase RIV7116_RS15640 PF00510 Cytochrome c oxidase subunit III RIV7116_RS15645 PF00115 Cytochrome C and Quinol oxidase polypeptide I RIV7116_RS15650 PF00116 Cytochrome C oxidase subunit II, periplasmic domain RIV7116_RS15650 PF02790 Cytochrome C oxidase subunit II, transmembrane domain RIV7116_RS15665 PF01520 N-acetylmuramoyl-L-alanine amidase RIV7116_RS15670 PF01914 MarC family integral membrane protein RIV7116_RS15675 PF05199 GMC oxidoreductase RIV7116_RS15675 PF00732 GMC oxidoreductase RIV7116_RS15680 PF00510 Cytochrome c oxidase subunit III RIV7116_RS15685 PF00115 Cytochrome C and Quinol oxidase polypeptide I RIV7116_RS15690 PF00116 Cytochrome C oxidase subunit II, periplasmic domain RIV7116_RS15690 PF02790 Cytochrome C oxidase subunit II, transmembrane domain RIV7116_RS15725 PF01253 Translation initiation factor SUI1 RIV7116_RS15790 PF01960 ArgJ family RIV7116_RS15795 PF02934 GatB/GatE catalytic domain RIV7116_RS15795 PF02637 GatB domain RIV7116_RS15810 PF00533 BRCA1 C Terminus (BRCT) domain RIV7116_RS15810 PF01653 NAD-dependent DNA ligase adenylation domain RIV7116_RS15810 PF03120 NAD-dependent DNA ligase OB-fold domain RIV7116_RS15810 PF12826 Helix-hairpin-helix motif RIV7116_RS15810 PF03119 NAD-dependent DNA ligase C4 zinc finger domain RIV7116_RS15825 PF04230 Polysaccharide pyruvyl transferase RIV7116_RS15830 PF01384 Phosphate transporter family RIV7116_RS15835 PF00107 Zinc-binding dehydrogenase RIV7116_RS15835 PF08240 Alcohol dehydrogenase GroES-like domain RIV7116_RS15845 PF00400 WD domain, G-beta repeat RIV7116_RS15845 PF12894 Anaphase-promoting complex subunit 4 WD40 domain RIV7116_RS15855 PF03358 NADPH-dependent FMN reductase RIV7116_RS15855 PF04205 FMN-binding domain RIV7116_RS15855 PF00890 FAD binding domain RIV7116_RS15865 PF01209 ubiE/COQ5 methyltransferase family RIV7116_RS15875 PF03951 Glutamine synthetase, beta-Grasp domain RIV7116_RS15875 PF00120 Glutamine synthetase, catalytic domain RIV7116_RS15880 PF00502 Phycobilisome protein RIV7116_RS15885 PF01479 S4 domain RIV7116_RS15885 PF01728 FtsJ-like methyltransferase RIV7116_RS15910 PF08450 SMP-30/Gluconolactonase/LRE-like region RIV7116_RS15915 PF07995 Glucose / Sorbosone dehydrogenase RIV7116_RS15920 PF00106 short chain dehydrogenase RIV7116_RS15925 PF00521 DNA gyrase/topoisomerase IV, subunit A RIV7116_RS15925 PF03989 DNA gyrase C-terminal domain, beta-propeller RIV7116_RS15960 PF01556 DnaJ C terminal domain RIV7116_RS15960 PF00226 DnaJ domain RIV7116_RS15960 PF00684 DnaJ central domain RIV7116_RS15965 PF00574 Clp protease RIV7116_RS15970 PF00574 Clp protease RIV7116_RS15975 PF00092 von Willebrand factor type A domain RIV7116_RS15980 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily RIV7116_RS15990 PF01223 DNA/RNA non-specific endonuclease RIV7116_RS16010 PF04055 Radical SAM superfamily RIV7116_RS16020 PF00582 Universal stress protein family RIV7116_RS16025 PF00162 Phosphoglycerate kinase RIV7116_RS16030 PF00293 NUDIX domain RIV7116_RS16045 PF02675 S-adenosylmethionine decarboxylase RIV7116_RS16050 PF00805 Pentapeptide repeats (8 copies) RIV7116_RS16050 PF00069 Protein kinase domain RIV7116_RS16055 PF00069 Protein kinase domain RIV7116_RS16065 PF02469 Fasciclin domain RIV7116_RS16080 PF04545 Sigma-70, region 4 RIV7116_RS16080 PF00140 Sigma-70 factor, region 1.2 RIV7116_RS16080 PF04539 Sigma-70 region 3 RIV7116_RS16080 PF04542 Sigma-70 region 2 RIV7116_RS16090 PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP RIV7116_RS16090 PF12557 Cob(I)alamin adenosyltransferase N terminal RIV7116_RS16095 PF00535 Glycosyl transferase family 2 RIV7116_RS16100 PF00076 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) RIV7116_RS16105 PF01965 DJ-1/PfpI family RIV7116_RS16110 PF00072 Response regulator receiver domain RIV7116_RS16110 PF00196 Bacterial regulatory proteins, luxR family RIV7116_RS16130 PF00929 Exonuclease RIV7116_RS16135 PF00440 Bacterial regulatory proteins, tetR family RIV7116_RS16135 PF17932 Tetracyclin repressor-like, C-terminal domain RIV7116_RS16145 PF03717 Penicillin-binding Protein dimerisation domain RIV7116_RS16145 PF03793 PASTA domain RIV7116_RS16145 PF00905 Penicillin binding protein transpeptidase domain RIV7116_RS16160 PF02806 Alpha amylase, C-terminal all-beta domain RIV7116_RS16160 PF00128 Alpha amylase, catalytic domain RIV7116_RS16160 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) RIV7116_RS16180 PF00266 Aminotransferase class-V RIV7116_RS16195 PF00069 Protein kinase domain RIV7116_RS16205 PF00749 tRNA synthetases class I (E and Q), catalytic domain RIV7116_RS16215 PF01434 Peptidase family M41 RIV7116_RS16215 PF00004 ATPase family associated with various cellular activities (AAA) RIV7116_RS16215 PF17862 AAA+ lid domain RIV7116_RS16215 PF06480 FtsH Extracellular RIV7116_RS16220 PF00072 Response regulator receiver domain RIV7116_RS16240 PF00300 Histidine phosphatase superfamily (branch 1) RIV7116_RS16255 PF00724 NADH:flavin oxidoreductase / NADH oxidase family RIV7116_RS16270 PF00005 ABC transporter RIV7116_RS16275 PF00005 ABC transporter RIV7116_RS16275 PF02687 FtsX-like permease family RIV7116_RS16275 PF12704 MacB-like periplasmic core domain RIV7116_RS16280 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion RIV7116_RS16295 PF00486 Transcriptional regulatory protein, C terminal RIV7116_RS16295 PF00072 Response regulator receiver domain RIV7116_RS16300 PF00672 HAMP domain RIV7116_RS16300 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RIV7116_RS16300 PF00512 His Kinase A (phospho-acceptor) domain RIV7116_RS16320 PF00264 Common central domain of tyrosinase RIV7116_RS16325 PF13649 Methyltransferase domain RIV7116_RS16330 PF02875 Mur ligase family, glutamate ligase domain RIV7116_RS16330 PF08245 Mur ligase middle domain RIV7116_RS16335 PF02092 Glycyl-tRNA synthetase beta subunit RIV7116_RS16355 PF01872 RibD C-terminal domain RIV7116_RS16365 PF00106 short chain dehydrogenase RIV7116_RS16375 PF00072 Response regulator receiver domain RIV7116_RS16380 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RIV7116_RS16380 PF00360 Phytochrome region RIV7116_RS16380 PF00512 His Kinase A (phospho-acceptor) domain RIV7116_RS16380 PF08446 PAS fold RIV7116_RS16380 PF01590 GAF domain RIV7116_RS16385 PF00672 HAMP domain RIV7116_RS16385 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) RIV7116_RS16385 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RIV7116_RS16385 PF00512 His Kinase A (phospho-acceptor) domain RIV7116_RS16385 PF01627 Hpt domain RIV7116_RS16385 PF00072 Response regulator receiver domain RIV7116_RS16390 PF09335 SNARE associated Golgi protein RIV7116_RS16395 PF05378 Hydantoinase/oxoprolinase N-terminal region RIV7116_RS16395 PF01968 Hydantoinase/oxoprolinase RIV7116_RS16420 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain RIV7116_RS16420 PF10371 Domain of unknown function RIV7116_RS16420 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg RIV7116_RS16420 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II RIV7116_RS16420 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase RIV7116_RS16425 PF05552 Conserved TM helix RIV7116_RS16435 PF00106 short chain dehydrogenase RIV7116_RS16460 PF04480 Protein of unknown function (DUF559) RIV7116_RS16470 PF00370 FGGY family of carbohydrate kinases, N-terminal domain RIV7116_RS16470 PF02782 FGGY family of carbohydrate kinases, C-terminal domain RIV7116_RS16480 PF13411 MerR HTH family regulatory protein RIV7116_RS16485 PF01613 Flavin reductase like domain RIV7116_RS16485 PF00753 Metallo-beta-lactamase superfamily RIV7116_RS16490 PF00258 Flavodoxin RIV7116_RS16490 PF01613 Flavin reductase like domain RIV7116_RS16500 PF17657 Bacterial DNA polymerase III alpha subunit finger domain RIV7116_RS16500 PF14579 Helix-hairpin-helix motif RIV7116_RS16500 PF02811 PHP domain RIV7116_RS16500 PF07733 Bacterial DNA polymerase III alpha NTPase domain RIV7116_RS16500 PF01336 OB-fold nucleic acid binding domain RIV7116_RS16565 PF04607 Region found in RelA / SpoT proteins RIV7116_RS16565 PF13291 ACT domain RIV7116_RS16565 PF02824 TGS domain RIV7116_RS16575 PF07969 Amidohydrolase family RIV7116_RS16580 PF16363 GDP-mannose 4,6 dehydratase RIV7116_RS16605 PF01098 Cell cycle protein RIV7116_RS16620 PF05140 ResB-like family RIV7116_RS16630 PF14489 QueF-like protein RIV7116_RS16665 PF01520 N-acetylmuramoyl-L-alanine amidase RIV7116_RS16665 PF01471 Putative peptidoglycan binding domain RIV7116_RS16675 PF00004 ATPase family associated with various cellular activities (AAA) RIV7116_RS16675 PF00101 Ribulose bisphosphate carboxylase, small chain RIV7116_RS16695 PF00005 ABC transporter RIV7116_RS16695 PF03412 Peptidase C39 family RIV7116_RS16695 PF00664 ABC transporter transmembrane region RIV7116_RS16700 PF13533 Biotin-lipoyl like RIV7116_RS16750 PF02522 Aminoglycoside 3-N-acetyltransferase RIV7116_RS16760 PF00101 Ribulose bisphosphate carboxylase, small chain RIV7116_RS16765 PF02341 RbcX protein RIV7116_RS16770 PF00016 Ribulose bisphosphate carboxylase large chain, catalytic domain RIV7116_RS16770 PF02788 Ribulose bisphosphate carboxylase large chain, N-terminal domain RIV7116_RS16780 PF02548 Ketopantoate hydroxymethyltransferase RIV7116_RS16785 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain RIV7116_RS16785 PF01842 ACT domain RIV7116_RS16785 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain RIV7116_RS16800 PF00085 Thioredoxin RIV7116_RS16835 PF00128 Alpha amylase, catalytic domain RIV7116_RS16835 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) RIV7116_RS16835 PF17999 Pullulanase N1-terminal domain RIV7116_RS16855 PF12464 Maltose acetyltransferase RIV7116_RS16855 PF14602 Hexapeptide repeat of succinyl-transferase RIV7116_RS16855 PF00132 Bacterial transferase hexapeptide (six repeats) RIV7116_RS16870 PF01370 NAD dependent epimerase/dehydratase family RIV7116_RS16875 PF00535 Glycosyl transferase family 2 RIV7116_RS16880 PF04932 O-Antigen ligase RIV7116_RS16890 PF00132 Bacterial transferase hexapeptide (six repeats) RIV7116_RS16895 PF13614 AAA domain RIV7116_RS16895 PF13807 G-rich domain on putative tyrosine kinase RIV7116_RS16895 PF02706 Chain length determinant protein RIV7116_RS16900 PF02397 Bacterial sugar transferase RIV7116_RS16910 PF00581 Rhodanese-like domain RIV7116_RS16910 PF00899 ThiF family RIV7116_RS16950 PF03633 Glycosyl hydrolase family 65, C-terminal domain RIV7116_RS16950 PF03636 Glycosyl hydrolase family 65, N-terminal domain RIV7116_RS16950 PF03632 Glycosyl hydrolase family 65 central catalytic domain RIV7116_RS16955 PF00395 S-layer homology domain RIV7116_RS16955 PF04966 Carbohydrate-selective porin, OprB family RIV7116_RS16960 PF02347 Glycine cleavage system P-protein RIV7116_RS16965 PF01597 Glycine cleavage H-protein RIV7116_RS16970 PF01571 Aminomethyltransferase folate-binding domain RIV7116_RS16970 PF08669 Glycine cleavage T-protein C-terminal barrel domain RIV7116_RS16990 PF00905 Penicillin binding protein transpeptidase domain RIV7116_RS16990 PF03717 Penicillin-binding Protein dimerisation domain RIV7116_RS16995 PF00005 ABC transporter RIV7116_RS16995 PF08402 TOBE domain RIV7116_RS17000 PF13416 Bacterial extracellular solute-binding protein RIV7116_RS17005 PF00528 Binding-protein-dependent transport system inner membrane component RIV7116_RS17010 PF00534 Glycosyl transferases group 1 RIV7116_RS17010 PF00862 Sucrose synthase RIV7116_RS17030 PF13442 Cytochrome C oxidase, cbb3-type, subunit III RIV7116_RS17045 PF02875 Mur ligase family, glutamate ligase domain RIV7116_RS17045 PF01225 Mur ligase family, catalytic domain RIV7116_RS17045 PF08245 Mur ligase middle domain RIV7116_RS17065 PF07885 Ion channel RIV7116_RS17075 PF00293 NUDIX domain RIV7116_RS17080 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) RIV7116_RS17085 PF00912 Transglycosylase RIV7116_RS17085 PF00905 Penicillin binding protein transpeptidase domain RIV7116_RS17105 PF01189 16S rRNA methyltransferase RsmB/F RIV7116_RS17105 PF01029 NusB family RIV7116_RS17125 PF04422 Coenzyme F420 hydrogenase/dehydrogenase, beta subunit N-term RIV7116_RS17125 PF04432 Coenzyme F420 hydrogenase/dehydrogenase, beta subunit C terminus RIV7116_RS17130 PF00805 Pentapeptide repeats (8 copies) RIV7116_RS17130 PF00069 Protein kinase domain RIV7116_RS17150 PF00762 Ferrochelatase RIV7116_RS17155 PF00005 ABC transporter RIV7116_RS17155 PF02687 FtsX-like permease family RIV7116_RS17155 PF12704 MacB-like periplasmic core domain RIV7116_RS17170 PF18665 Tetracyclin repressor-like, C-terminal domain RIV7116_RS17170 PF00440 Bacterial regulatory proteins, tetR family RIV7116_RS17180 PF00583 Acetyltransferase (GNAT) family RIV7116_RS17190 PF00427 Phycobilisome Linker polypeptide RIV7116_RS17195 PF00427 Phycobilisome Linker polypeptide RIV7116_RS17200 PF00427 Phycobilisome Linker polypeptide RIV7116_RS17210 PF03130 PBS lyase HEAT-like repeat RIV7116_RS17215 PF01383 CpcD/allophycocyanin linker domain RIV7116_RS17220 PF01383 CpcD/allophycocyanin linker domain RIV7116_RS17220 PF00427 Phycobilisome Linker polypeptide RIV7116_RS17225 PF00502 Phycobilisome protein RIV7116_RS17230 PF00502 Phycobilisome protein RIV7116_RS17240 PF03130 PBS lyase HEAT-like repeat RIV7116_RS17245 PF01383 CpcD/allophycocyanin linker domain RIV7116_RS17245 PF00427 Phycobilisome Linker polypeptide RIV7116_RS17250 PF00502 Phycobilisome protein RIV7116_RS17255 PF00502 Phycobilisome protein RIV7116_RS17260 PF01479 S4 domain RIV7116_RS17260 PF00849 RNA pseudouridylate synthase RIV7116_RS17290 PF00072 Response regulator receiver domain RIV7116_RS17290 PF14332 Domain of unknown function (DUF4388) RIV7116_RS17295 PF12833 Helix-turn-helix domain RIV7116_RS17295 PF07495 Y_Y_Y domain RIV7116_RS17295 PF07494 Two component regulator propeller RIV7116_RS17295 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RIV7116_RS17295 PF00512 His Kinase A (phospho-acceptor) domain RIV7116_RS17295 PF00072 Response regulator receiver domain RIV7116_RS17305 PF01590 GAF domain RIV7116_RS17305 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain RIV7116_RS17310 PF02895 Signal transducing histidine kinase, homodimeric domain RIV7116_RS17310 PF00072 Response regulator receiver domain RIV7116_RS17310 PF01627 Hpt domain RIV7116_RS17310 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RIV7116_RS17310 PF01584 CheW-like domain RIV7116_RS17330 PF01370 NAD dependent epimerase/dehydratase family RIV7116_RS17335 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain RIV7116_RS17335 PF02843 Phosphoribosylglycinamide synthetase, C domain RIV7116_RS17335 PF02844 Phosphoribosylglycinamide synthetase, N domain RIV7116_RS17340 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RIV7116_RS17340 PF00989 PAS fold RIV7116_RS17340 PF00512 His Kinase A (phospho-acceptor) domain RIV7116_RS17340 PF00672 HAMP domain RIV7116_RS17345 PF00850 Histone deacetylase domain RIV7116_RS17395 PF00291 Pyridoxal-phosphate dependent enzyme RIV7116_RS17400 PF02597 ThiS family RIV7116_RS17405 PF00395 S-layer homology domain RIV7116_RS17405 PF04966 Carbohydrate-selective porin, OprB family RIV7116_RS17425 PF02915 Rubrerythrin RIV7116_RS17435 PF02325 YGGT family RIV7116_RS17475 PF01699 Sodium/calcium exchanger protein RIV7116_RS17480 PF01471 Putative peptidoglycan binding domain RIV7116_RS17480 PF07486 Cell Wall Hydrolase RIV7116_RS17485 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) RIV7116_RS17485 PF00672 HAMP domain RIV7116_RS17485 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RIV7116_RS17485 PF00512 His Kinase A (phospho-acceptor) domain RIV7116_RS17485 PF01627 Hpt domain RIV7116_RS17485 PF00072 Response regulator receiver domain RIV7116_RS17495 PF06725 3D domain RIV7116_RS17495 PF03562 MltA specific insert domain RIV7116_RS17500 PF00132 Bacterial transferase hexapeptide (six repeats) RIV7116_RS17500 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD RIV7116_RS17510 PF02754 Cysteine-rich domain RIV7116_RS17515 PF00550 Phosphopantetheine attachment site RIV7116_RS17520 PF02801 Beta-ketoacyl synthase, C-terminal domain RIV7116_RS17520 PF00109 Beta-ketoacyl synthase, N-terminal domain RIV7116_RS17525 PF00456 Transketolase, thiamine diphosphate binding domain RIV7116_RS17525 PF02780 Transketolase, C-terminal domain RIV7116_RS17525 PF02779 Transketolase, pyrimidine binding domain RIV7116_RS17560 PF00440 Bacterial regulatory proteins, tetR family RIV7116_RS17575 PF02777 Iron/manganese superoxide dismutases, C-terminal domain RIV7116_RS17575 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain RIV7116_RS17580 PF01743 Poly A polymerase head domain RIV7116_RS17580 PF00571 CBS domain RIV7116_RS17590 PF00583 Acetyltransferase (GNAT) family RIV7116_RS17605 PF00005 ABC transporter RIV7116_RS17605 PF08352 Oligopeptide/dipeptide transporter, C-terminal region RIV7116_RS17615 PF13291 ACT domain RIV7116_RS17615 PF04607 Region found in RelA / SpoT proteins RIV7116_RS17615 PF02824 TGS domain RIV7116_RS17630 PF12697 Alpha/beta hydrolase family RIV7116_RS17635 PF01967 MoaC family RIV7116_RS17670 PF00128 Alpha amylase, catalytic domain RIV7116_RS17675 PF01383 CpcD/allophycocyanin linker domain RIV7116_RS17680 PF00502 Phycobilisome protein RIV7116_RS17685 PF00502 Phycobilisome protein RIV7116_RS17690 PF00502 Phycobilisome protein RIV7116_RS17690 PF00427 Phycobilisome Linker polypeptide RIV7116_RS17695 PF00085 Thioredoxin RIV7116_RS17710 PF04545 Sigma-70, region 4 RIV7116_RS17710 PF04542 Sigma-70 region 2 RIV7116_RS17735 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RIV7116_RS17735 PF00512 His Kinase A (phospho-acceptor) domain RIV7116_RS17740 PF13847 Methyltransferase domain RIV7116_RS17745 PF12966 N-ATPase, AtpR subunit RIV7116_RS17750 PF00119 ATP synthase A chain RIV7116_RS17755 PF00137 ATP synthase subunit C RIV7116_RS17760 PF00430 ATP synthase B/B' CF(0) RIV7116_RS17765 PF00430 ATP synthase B/B' CF(0) RIV7116_RS17770 PF00213 ATP synthase delta (OSCP) subunit RIV7116_RS17775 PF00306 ATP synthase alpha/beta chain, C terminal domain RIV7116_RS17775 PF02874 ATP synthase alpha/beta family, beta-barrel domain RIV7116_RS17775 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain RIV7116_RS17780 PF00231 ATP synthase RIV7116_RS17795 PF00570 HRDC domain RIV7116_RS17795 PF01612 3'-5' exonuclease RIV7116_RS17825 PF00805 Pentapeptide repeats (8 copies) RIV7116_RS17825 PF00069 Protein kinase domain RIV7116_RS17830 PF13180 PDZ domain RIV7116_RS17830 PF17820 PDZ domain RIV7116_RS17850 PF00892 EamA-like transporter family RIV7116_RS17855 PF03574 Peptidase family S48 RIV7116_RS17855 PF18460 Heterocyst differentiation regulator C-terminal Hood domain RIV7116_RS17865 PF01479 S4 domain RIV7116_RS17865 PF00163 Ribosomal protein S4/S9 N-terminal domain RIV7116_RS17885 PF00067 Cytochrome P450 RIV7116_RS17895 PF00400 WD domain, G-beta repeat RIV7116_RS17895 PF00931 NB-ARC domain RIV7116_RS17935 PF12849 PBP superfamily domain RIV7116_RS17960 PF00664 ABC transporter transmembrane region RIV7116_RS17960 PF00005 ABC transporter RIV7116_RS17975 PF00005 ABC transporter RIV7116_RS17975 PF16326 ABC transporter C-terminal domain RIV7116_RS17975 PF12848 ABC transporter RIV7116_RS17985 PF00581 Rhodanese-like domain RIV7116_RS17995 PF01032 FecCD transport family RIV7116_RS18015 PF01891 Cobalt uptake substrate-specific transmembrane region RIV7116_RS18020 PF02553 Cobalt transport protein component CbiN RIV7116_RS18025 PF02361 Cobalt transport protein RIV7116_RS18030 PF00005 ABC transporter RIV7116_RS18040 PF02222 ATP-grasp domain RIV7116_RS18045 PF12697 Alpha/beta hydrolase family RIV7116_RS18065 PF03479 Plants and Prokaryotes Conserved (PCC) domain RIV7116_RS18065 PF00132 Bacterial transferase hexapeptide (six repeats) RIV7116_RS18065 PF12804 MobA-like NTP transferase domain RIV7116_RS18075 PF00535 Glycosyl transferase family 2 RIV7116_RS18085 PF00535 Glycosyl transferase family 2 RIV7116_RS18090 PF00005 ABC transporter RIV7116_RS18100 PF00535 Glycosyl transferase family 2 RIV7116_RS18105 PF13439 Glycosyltransferase Family 4 RIV7116_RS18105 PF00534 Glycosyl transferases group 1 RIV7116_RS18135 PF00427 Phycobilisome Linker polypeptide RIV7116_RS18140 PF01869 BadF/BadG/BcrA/BcrD ATPase family RIV7116_RS18155 PF02782 FGGY family of carbohydrate kinases, C-terminal domain RIV7116_RS18160 PF07465 Photosystem I protein M (PsaM) RIV7116_RS18180 PF00043 Glutathione S-transferase, C-terminal domain RIV7116_RS18180 PF02798 Glutathione S-transferase, N-terminal domain RIV7116_RS18185 PF04461 Protein of unknown function (DUF520) RIV7116_RS18215 PF07085 DRTGG domain RIV7116_RS18230 PF12169 DNA polymerase III subunits gamma and tau domain III RIV7116_RS18245 PF00067 Cytochrome P450 RIV7116_RS18250 PF00528 Binding-protein-dependent transport system inner membrane component RIV7116_RS18260 PF00005 ABC transporter RIV7116_RS18265 PF07690 Major Facilitator Superfamily RIV7116_RS18270 PF14159 CAAD domains of cyanobacterial aminoacyl-tRNA synthetase RIV7116_RS18270 PF10458 Valyl tRNA synthetase tRNA binding arm RIV7116_RS18270 PF00133 tRNA synthetases class I (I, L, M and V) RIV7116_RS18270 PF08264 Anticodon-binding domain of tRNA RIV7116_RS18280 PF03109 ABC1 family RIV7116_RS18285 PF02463 RecF/RecN/SMC N terminal domain RIV7116_RS18300 PF00144 Beta-lactamase RIV7116_RS18315 PF00211 Adenylate and Guanylate cyclase catalytic domain RIV7116_RS18330 PF00528 Binding-protein-dependent transport system inner membrane component RIV7116_RS18335 PF11266 Long-chain fatty aldehyde decarbonylase RIV7116_RS18340 PF01488 Shikimate / quinate 5-dehydrogenase RIV7116_RS18345 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit RIV7116_RS18350 PF00106 short chain dehydrogenase RIV7116_RS18355 PF01227 GTP cyclohydrolase I RIV7116_RS18360 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase RIV7116_RS18365 PF01241 Photosystem I psaG / psaK RIV7116_RS18370 PF00571 CBS domain RIV7116_RS18370 PF02163 Peptidase family M50 RIV7116_RS18380 PF01888 CbiD RIV7116_RS18390 PF00011 Hsp20/alpha crystallin family RIV7116_RS18400 PF02571 Precorrin-6x reductase CbiJ/CobK RIV7116_RS18405 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases RIV7116_RS18410 PF02570 Precorrin-8X methylmutase RIV7116_RS18415 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases RIV7116_RS18425 PF07885 Ion channel RIV7116_RS18425 PF02254 TrkA-N domain RIV7116_RS18430 PF02254 TrkA-N domain RIV7116_RS18430 PF07885 Ion channel RIV7116_RS18450 PF00069 Protein kinase domain RIV7116_RS18455 PF00069 Protein kinase domain RIV7116_RS18455 PF03793 PASTA domain RIV7116_RS18460 PF03099 Biotin/lipoate A/B protein ligase family RIV7116_RS18470 PF00805 Pentapeptide repeats (8 copies) RIV7116_RS18470 PF00069 Protein kinase domain RIV7116_RS18475 PF00069 Protein kinase domain RIV7116_RS18475 PF00805 Pentapeptide repeats (8 copies) RIV7116_RS18480 PF00805 Pentapeptide repeats (8 copies) RIV7116_RS18480 PF00069 Protein kinase domain RIV7116_RS18500 PF01590 GAF domain RIV7116_RS18535 PF12697 Alpha/beta hydrolase family RIV7116_RS18535 PF08241 Methyltransferase domain RIV7116_RS18540 PF00534 Glycosyl transferases group 1 RIV7116_RS18555 PF01370 NAD dependent epimerase/dehydratase family RIV7116_RS18560 PF00534 Glycosyl transferases group 1 RIV7116_RS18560 PF13439 Glycosyltransferase Family 4 RIV7116_RS18565 PF01408 Oxidoreductase family, NAD-binding Rossmann fold RIV7116_RS18565 PF02894 Oxidoreductase family, C-terminal alpha/beta domain RIV7116_RS18590 PF00534 Glycosyl transferases group 1 RIV7116_RS18590 PF00862 Sucrose synthase RIV7116_RS18595 PF00132 Bacterial transferase hexapeptide (six repeats) RIV7116_RS18600 PF13614 AAA domain RIV7116_RS18605 PF03808 Glycosyl transferase WecB/TagA/CpsF family RIV7116_RS18610 PF01520 N-acetylmuramoyl-L-alanine amidase RIV7116_RS18610 PF11741 AMIN domain RIV7116_RS18615 PF00117 Glutamine amidotransferase class-I RIV7116_RS18615 PF06418 CTP synthase N-terminus RIV7116_RS18625 PF00480 ROK family RIV7116_RS18635 PF12911 N-terminal TM domain of oligopeptide transport permease C RIV7116_RS18635 PF00528 Binding-protein-dependent transport system inner membrane component RIV7116_RS18640 PF07992 Pyridine nucleotide-disulphide oxidoreductase RIV7116_RS18655 PF14245 Type IV pilin PilA RIV7116_RS18655 PF07963 Prokaryotic N-terminal methylation motif RIV7116_RS18680 PF00069 Protein kinase domain RIV7116_RS18680 PF00805 Pentapeptide repeats (8 copies) RIV7116_RS18690 PF08448 PAS fold RIV7116_RS18690 PF08447 PAS fold RIV7116_RS18690 PF00990 Diguanylate cyclase, GGDEF domain RIV7116_RS18690 PF00563 EAL domain RIV7116_RS18695 PF00849 RNA pseudouridylate synthase RIV7116_RS18700 PF01964 Radical SAM ThiC family RIV7116_RS18705 PF00156 Phosphoribosyl transferase domain RIV7116_RS18725 PF00571 CBS domain RIV7116_RS18725 PF03471 Transporter associated domain RIV7116_RS18725 PF01595 Cyclin M transmembrane N-terminal domain RIV7116_RS18730 PF06508 Queuosine biosynthesis protein QueC RIV7116_RS18735 PF01408 Oxidoreductase family, NAD-binding Rossmann fold RIV7116_RS18735 PF02894 Oxidoreductase family, C-terminal alpha/beta domain RIV7116_RS18750 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain RIV7116_RS18750 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I RIV7116_RS18750 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II RIV7116_RS18750 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III RIV7116_RS18755 PF01725 Ham1 family RIV7116_RS18760 PF00543 Nitrogen regulatory protein P-II RIV7116_RS18770 PF08543 Phosphomethylpyrimidine kinase RIV7116_RS18780 PF00082 Subtilase family RIV7116_RS18780 PF04151 Bacterial pre-peptidase C-terminal domain RIV7116_RS18810 PF02698 DUF218 domain RIV7116_RS18815 PF07685 CobB/CobQ-like glutamine amidotransferase domain RIV7116_RS18820 PF08353 Domain of unknown function (DUF1727) RIV7116_RS18820 PF08245 Mur ligase middle domain RIV7116_RS18835 PF13396 Phospholipase_D-nuclease N-terminal RIV7116_RS18835 PF13091 PLD-like domain RIV7116_RS18840 PF10017 Histidine-specific methyltransferase, SAM-dependent RIV7116_RS18845 PF12867 DinB superfamily RIV7116_RS18845 PF03781 Sulfatase-modifying factor enzyme 1 RIV7116_RS18850 PF13230 Glutamine amidotransferases class-II RIV7116_RS18855 PF04241 Protein of unknown function (DUF423) RIV7116_RS18870 PF07109 Magnesium-protoporphyrin IX methyltransferase C-terminus RIV7116_RS18875 PF01979 Amidohydrolase family RIV7116_RS18880 PF00731 AIR carboxylase RIV7116_RS18885 PF00909 Ammonium Transporter Family RIV7116_RS18895 PF00069 Protein kinase domain RIV7116_RS18895 PF03793 PASTA domain RIV7116_RS18900 PF00069 Protein kinase domain RIV7116_RS18900 PF03793 PASTA domain RIV7116_RS18910 PF00909 Ammonium Transporter Family RIV7116_RS18920 PF02401 LytB protein RIV7116_RS18935 PF02225 PA domain RIV7116_RS18935 PF00082 Subtilase family RIV7116_RS18935 PF06280 Fn3-like domain RIV7116_RS18990 PF00795 Carbon-nitrogen hydrolase RIV7116_RS19005 PF00072 Response regulator receiver domain RIV7116_RS19005 PF00512 His Kinase A (phospho-acceptor) domain RIV7116_RS19005 PF13188 PAS domain RIV7116_RS19005 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RIV7116_RS19005 PF08448 PAS fold RIV7116_RS19010 PF00582 Universal stress protein family RIV7116_RS19015 PF01627 Hpt domain RIV7116_RS19015 PF00072 Response regulator receiver domain RIV7116_RS19015 PF00486 Transcriptional regulatory protein, C terminal RIV7116_RS19025 PF01926 50S ribosome-binding GTPase RIV7116_RS19025 PF10396 GTP-binding protein TrmE N-terminus RIV7116_RS19025 PF12631 MnmE helical domain RIV7116_RS19035 PF01348 Type II intron maturase RIV7116_RS19035 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) RIV7116_RS19055 PF00248 Aldo/keto reductase family RIV7116_RS19060 PF08000 Bacterial PH domain RIV7116_RS19090 PF00171 Aldehyde dehydrogenase family RIV7116_RS19095 PF00805 Pentapeptide repeats (8 copies) RIV7116_RS19095 PF00069 Protein kinase domain RIV7116_RS19105 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase RIV7116_RS19145 PF02594 Uncharacterised ACR, YggU family COG1872 RIV7116_RS19150 PF02405 Permease MlaE RIV7116_RS19155 PF00305 Lipoxygenase RIV7116_RS19165 PF02586 SOS response associated peptidase (SRAP) RIV7116_RS19170 PF00515 Tetratricopeptide repeat RIV7116_RS19175 PF02686 Glu-tRNAGln amidotransferase C subunit RIV7116_RS19180 PF01641 SelR domain RIV7116_RS19190 PF02687 FtsX-like permease family RIV7116_RS19190 PF00005 ABC transporter RIV7116_RS19190 PF12704 MacB-like periplasmic core domain RIV7116_RS19205 PF07690 Major Facilitator Superfamily RIV7116_RS19220 PF01494 FAD binding domain RIV7116_RS19225 PF07486 Cell Wall Hydrolase RIV7116_RS19225 PF01471 Putative peptidoglycan binding domain RIV7116_RS19235 PF00195 Chalcone and stilbene synthases, N-terminal domain RIV7116_RS19235 PF02797 Chalcone and stilbene synthases, C-terminal domain RIV7116_RS19245 PF01593 Flavin containing amine oxidoreductase RIV7116_RS19295 PF01641 SelR domain RIV7116_RS19320 PF01156 Inosine-uridine preferring nucleoside hydrolase RIV7116_RS19340 PF00270 DEAD/DEAH box helicase RIV7116_RS19340 PF00271 Helicase conserved C-terminal domain RIV7116_RS19340 PF17191 RecG wedge domain RIV7116_RS19365 PF00990 Diguanylate cyclase, GGDEF domain RIV7116_RS19365 PF00563 EAL domain RIV7116_RS19365 PF00360 Phytochrome region RIV7116_RS19365 PF01590 GAF domain RIV7116_RS19375 PF00300 Histidine phosphatase superfamily (branch 1) RIV7116_RS19390 PF01593 Flavin containing amine oxidoreductase RIV7116_RS19395 PF00005 ABC transporter RIV7116_RS19440 PF00011 Hsp20/alpha crystallin family RIV7116_RS19455 PF03629 Carbohydrate esterase, sialic acid-specific acetylesterase RIV7116_RS19455 PF00756 Putative esterase RIV7116_RS19465 PF17820 PDZ domain RIV7116_RS19465 PF13180 PDZ domain RIV7116_RS19470 PF13180 PDZ domain RIV7116_RS19475 PF00072 Response regulator receiver domain RIV7116_RS19475 PF00196 Bacterial regulatory proteins, luxR family RIV7116_RS19490 PF00149 Calcineurin-like phosphoesterase RIV7116_RS19510 PF14492 Elongation Factor G, domain II RIV7116_RS19510 PF03144 Elongation factor Tu domain 2 RIV7116_RS19510 PF00679 Elongation factor G C-terminus RIV7116_RS19510 PF03764 Elongation factor G, domain IV RIV7116_RS19510 PF00009 Elongation factor Tu GTP binding domain RIV7116_RS19525 PF01661 Macro domain RIV7116_RS19540 PF02894 Oxidoreductase family, C-terminal alpha/beta domain RIV7116_RS19540 PF01408 Oxidoreductase family, NAD-binding Rossmann fold RIV7116_RS19585 PF12894 Anaphase-promoting complex subunit 4 WD40 domain RIV7116_RS19585 PF00400 WD domain, G-beta repeat RIV7116_RS19625 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain RIV7116_RS19625 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain RIV7116_RS19625 PF00205 Thiamine pyrophosphate enzyme, central domain RIV7116_RS19630 PF00171 Aldehyde dehydrogenase family RIV7116_RS19635 PF00211 Adenylate and Guanylate cyclase catalytic domain RIV7116_RS19645 PF01926 50S ribosome-binding GTPase RIV7116_RS19655 PF00400 WD domain, G-beta repeat RIV7116_RS19660 PF01791 DeoC/LacD family aldolase RIV7116_RS19670 PF02638 Glycosyl hydrolase-like 10 RIV7116_RS19735 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle RIV7116_RS19745 PF00561 alpha/beta hydrolase fold RIV7116_RS19755 PF03631 Virulence factor BrkB RIV7116_RS19795 PF00486 Transcriptional regulatory protein, C terminal RIV7116_RS19795 PF00072 Response regulator receiver domain RIV7116_RS19805 PF01738 Dienelactone hydrolase family RIV7116_RS19805 PF00156 Phosphoribosyl transferase domain RIV7116_RS19810 PF10011 Predicted membrane protein (DUF2254) RIV7116_RS19815 PF00924 Mechanosensitive ion channel RIV7116_RS19815 PF05552 Conserved TM helix RIV7116_RS19825 PF04545 Sigma-70, region 4 RIV7116_RS19825 PF04539 Sigma-70 region 3 RIV7116_RS19825 PF04542 Sigma-70 region 2 RIV7116_RS19825 PF00140 Sigma-70 factor, region 1.2 RIV7116_RS19830 PF05199 GMC oxidoreductase RIV7116_RS19830 PF00732 GMC oxidoreductase RIV7116_RS19840 PF06150 ChaB RIV7116_RS19845 PF00210 Ferritin-like domain RIV7116_RS19880 PF00069 Protein kinase domain RIV7116_RS19880 PF00805 Pentapeptide repeats (8 copies) RIV7116_RS19895 PF13180 PDZ domain RIV7116_RS19900 PF13180 PDZ domain RIV7116_RS19905 PF00595 PDZ domain RIV7116_RS19905 PF13180 PDZ domain RIV7116_RS19915 PF03040 CemA family RIV7116_RS19920 PF00708 Acylphosphatase RIV7116_RS19935 PF06827 Zinc finger found in FPG and IleRS RIV7116_RS19935 PF00133 tRNA synthetases class I (I, L, M and V) RIV7116_RS19935 PF08264 Anticodon-binding domain of tRNA RIV7116_RS19940 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) RIV7116_RS19945 PF00141 Peroxidase RIV7116_RS19950 PF13614 AAA domain RIV7116_RS19960 PF02136 Nuclear transport factor 2 (NTF2) domain RIV7116_RS19960 PF09150 Orange carotenoid protein, N-terminal RIV7116_RS19965 PF09397 Ftsk gamma domain RIV7116_RS19965 PF17854 FtsK alpha domain RIV7116_RS19965 PF01580 FtsK/SpoIIIE family RIV7116_RS19980 PF00535 Glycosyl transferase family 2 RIV7116_RS19985 PF04230 Polysaccharide pyruvyl transferase RIV7116_RS19995 PF13439 Glycosyltransferase Family 4 RIV7116_RS19995 PF00534 Glycosyl transferases group 1 RIV7116_RS20005 PF00395 S-layer homology domain RIV7116_RS20005 PF04966 Carbohydrate-selective porin, OprB family RIV7116_RS20020 PF00291 Pyridoxal-phosphate dependent enzyme RIV7116_RS20030 PF00814 Glycoprotease family RIV7116_RS20040 PF13735 tRNA nucleotidyltransferase domain 2 putative RIV7116_RS20040 PF12627 Probable RNA and SrmB- binding site of polymerase A RIV7116_RS20040 PF01743 Poly A polymerase head domain RIV7116_RS20050 PF11378 Protein of unknown function (DUF3181) RIV7116_RS20070 PF02638 Glycosyl hydrolase-like 10 RIV7116_RS20085 PF00117 Glutamine amidotransferase class-I RIV7116_RS20090 PF01219 Prokaryotic diacylglycerol kinase RIV7116_RS20095 PF02130 Uncharacterized protein family UPF0054 RIV7116_RS20100 PF03462 PCRF domain RIV7116_RS20100 PF00472 RF-1 domain RIV7116_RS20105 PF03462 PCRF domain RIV7116_RS20105 PF00472 RF-1 domain RIV7116_RS20110 PF01027 Inhibitor of apoptosis-promoting Bax1 RIV7116_RS20115 PF04542 Sigma-70 region 2 RIV7116_RS20115 PF04539 Sigma-70 region 3 RIV7116_RS20115 PF00140 Sigma-70 factor, region 1.2 RIV7116_RS20115 PF04545 Sigma-70, region 4 RIV7116_RS20120 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain RIV7116_RS20120 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III RIV7116_RS20120 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II RIV7116_RS20120 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I RIV7116_RS20125 PF01207 Dihydrouridine synthase (Dus) RIV7116_RS20145 PF17863 AAA lid domain RIV7116_RS20145 PF01078 Magnesium chelatase, subunit ChlI RIV7116_RS20145 PF13519 von Willebrand factor type A domain RIV7116_RS20150 PF00035 Double-stranded RNA binding motif RIV7116_RS20150 PF14622 Ribonuclease-III-like RIV7116_RS20155 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RIV7116_RS20155 PF00512 His Kinase A (phospho-acceptor) domain RIV7116_RS20155 PF09308 LuxQ, periplasmic RIV7116_RS20155 PF00072 Response regulator receiver domain RIV7116_RS20170 PF16745 RsgA N-terminal domain RIV7116_RS20170 PF03193 RsgA GTPase RIV7116_RS20180 PF00512 His Kinase A (phospho-acceptor) domain RIV7116_RS20180 PF12833 Helix-turn-helix domain RIV7116_RS20180 PF07494 Two component regulator propeller RIV7116_RS20180 PF00072 Response regulator receiver domain RIV7116_RS20180 PF07495 Y_Y_Y domain RIV7116_RS20180 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RIV7116_RS20185 PF07690 Major Facilitator Superfamily RIV7116_RS20185 PF00083 Sugar (and other) transporter RIV7116_RS20190 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family RIV7116_RS20195 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RIV7116_RS20195 PF03466 LysR substrate binding domain RIV7116_RS20200 PF00535 Glycosyl transferase family 2 RIV7116_RS20205 PF18348 Bacterial dipeptidyl-peptidase Sh3 domain RIV7116_RS20205 PF00877 NlpC/P60 family RIV7116_RS20215 PF00724 NADH:flavin oxidoreductase / NADH oxidase family RIV7116_RS20220 PF01494 FAD binding domain RIV7116_RS20230 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RIV7116_RS20230 PF03466 LysR substrate binding domain RIV7116_RS20235 PF02517 CPBP intramembrane metalloprotease RIV7116_RS20245 PF13614 AAA domain RIV7116_RS20265 PF00150 Cellulase (glycosyl hydrolase family 5) RIV7116_RS20275 PF03808 Glycosyl transferase WecB/TagA/CpsF family RIV7116_RS20295 PF01593 Flavin containing amine oxidoreductase RIV7116_RS20305 PF00953 Glycosyl transferase family 4 RIV7116_RS20310 PF00464 Serine hydroxymethyltransferase RIV7116_RS20320 PF16166 Chloroplast import apparatus Tic20-like RIV7116_RS20325 PF01557 Fumarylacetoacetate (FAA) hydrolase family RIV7116_RS20330 PF01250 Ribosomal protein S6 RIV7116_RS20345 PF09335 SNARE associated Golgi protein RIV7116_RS20350 PF00764 Arginosuccinate synthase RIV7116_RS20355 PF00535 Glycosyl transferase family 2 RIV7116_RS20360 PF02743 Cache domain RIV7116_RS20360 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RIV7116_RS20360 PF00512 His Kinase A (phospho-acceptor) domain RIV7116_RS20365 PF00318 Ribosomal protein S2 RIV7116_RS20370 PF00889 Elongation factor TS RIV7116_RS20380 PF00271 Helicase conserved C-terminal domain RIV7116_RS20380 PF00270 DEAD/DEAH box helicase RIV7116_RS20380 PF17191 RecG wedge domain RIV7116_RS20400 PF00117 Glutamine amidotransferase class-I RIV7116_RS20400 PF00958 GMP synthase C terminal domain RIV7116_RS20400 PF02540 NAD synthase RIV7116_RS20425 PF10442 FIST C domain RIV7116_RS20425 PF08495 FIST N domain RIV7116_RS20430 PF00149 Calcineurin-like phosphoesterase RIV7116_RS20440 PF02390 Putative methyltransferase RIV7116_RS20475 PF02514 CobN/Magnesium Chelatase RIV7116_RS20475 PF11965 Domain of unknown function (DUF3479) RIV7116_RS20485 PF01471 Putative peptidoglycan binding domain RIV7116_RS20485 PF08291 Peptidase M15 RIV7116_RS20500 PF13439 Glycosyltransferase Family 4 RIV7116_RS20500 PF00534 Glycosyl transferases group 1 RIV7116_RS20510 PF00535 Glycosyl transferase family 2 RIV7116_RS20515 PF00535 Glycosyl transferase family 2 RIV7116_RS20520 PF00005 ABC transporter RIV7116_RS20520 PF00664 ABC transporter transmembrane region RIV7116_RS20525 PF02397 Bacterial sugar transferase RIV7116_RS20530 PF13614 AAA domain RIV7116_RS20535 PF00534 Glycosyl transferases group 1 RIV7116_RS20535 PF13439 Glycosyltransferase Family 4 RIV7116_RS20555 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase RIV7116_RS20560 PF16363 GDP-mannose 4,6 dehydratase RIV7116_RS20565 PF01266 FAD dependent oxidoreductase RIV7116_RS20570 PF00483 Nucleotidyl transferase RIV7116_RS20585 PF00092 von Willebrand factor type A domain RIV7116_RS20590 PF00072 Response regulator receiver domain RIV7116_RS20590 PF14332 Domain of unknown function (DUF4388) RIV7116_RS20595 PF00072 Response regulator receiver domain RIV7116_RS20600 PF03484 tRNA synthetase B5 domain RIV7116_RS20600 PF03147 Ferredoxin-fold anticodon binding domain RIV7116_RS20600 PF01588 Putative tRNA binding domain RIV7116_RS20600 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain RIV7116_RS20600 PF03483 B3/4 domain RIV7116_RS20655 PF00528 Binding-protein-dependent transport system inner membrane component RIV7116_RS20660 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle RIV7116_RS20670 PF00421 Photosystem II protein RIV7116_RS20675 PF01405 Photosystem II reaction centre T protein RIV7116_RS20680 PF00575 S1 RNA binding domain RIV7116_RS20685 PF07683 Cobalamin synthesis protein cobW C-terminal domain RIV7116_RS20685 PF02492 CobW/HypB/UreG, nucleotide-binding domain RIV7116_RS20700 PF13419 Haloacid dehalogenase-like hydrolase RIV7116_RS20710 PF01126 Heme oxygenase RIV7116_RS20715 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I RIV7116_RS20715 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II RIV7116_RS20715 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain RIV7116_RS20715 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III RIV7116_RS20725 PF00535 Glycosyl transferase family 2 RIV7116_RS20730 PF00534 Glycosyl transferases group 1 RIV7116_RS20730 PF13439 Glycosyltransferase Family 4 RIV7116_RS20735 PF13439 Glycosyltransferase Family 4 RIV7116_RS20735 PF00534 Glycosyl transferases group 1 RIV7116_RS20745 PF00578 AhpC/TSA family RIV7116_RS20745 PF10417 C-terminal domain of 1-Cys peroxiredoxin RIV7116_RS20755 PF08446 PAS fold RIV7116_RS20755 PF00360 Phytochrome region RIV7116_RS20755 PF01590 GAF domain RIV7116_RS20755 PF00512 His Kinase A (phospho-acceptor) domain RIV7116_RS20755 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RIV7116_RS20760 PF00072 Response regulator receiver domain RIV7116_RS20765 PF00512 His Kinase A (phospho-acceptor) domain RIV7116_RS20765 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RIV7116_RS20765 PF00989 PAS fold RIV7116_RS20780 PF01432 Peptidase family M3 RIV7116_RS20805 PF00582 Universal stress protein family RIV7116_RS20815 PF02533 Photosystem II 4 kDa reaction centre component RIV7116_RS20820 PF05860 haemagglutination activity domain RIV7116_RS20825 PF01702 Queuine tRNA-ribosyltransferase RIV7116_RS20835 PF02654 Cobalamin-5-phosphate synthase RIV7116_RS20865 PF02547 Queuosine biosynthesis protein RIV7116_RS20885 PF00111 2Fe-2S iron-sulfur cluster binding domain RIV7116_RS20890 PF01408 Oxidoreductase family, NAD-binding Rossmann fold RIV7116_RS20895 PF00111 2Fe-2S iron-sulfur cluster binding domain RIV7116_RS20915 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase RIV7116_RS20920 PF14528 LAGLIDADG-like domain RIV7116_RS20920 PF03796 DnaB-like helicase C terminal domain RIV7116_RS20920 PF00772 DnaB-like helicase N terminal domain RIV7116_RS20920 PF14528 LAGLIDADG-like domain RIV7116_RS20920 PF00772 DnaB-like helicase N terminal domain RIV7116_RS20920 PF03796 DnaB-like helicase C terminal domain RIV7116_RS20925 PF03948 Ribosomal protein L9, C-terminal domain RIV7116_RS20925 PF01281 Ribosomal protein L9, N-terminal domain RIV7116_RS20935 PF03912 Psb28 protein RIV7116_RS20945 PF00588 SpoU rRNA Methylase family RIV7116_RS20950 PF00561 alpha/beta hydrolase fold RIV7116_RS20960 PF07517 SecA DEAD-like domain RIV7116_RS20960 PF01043 SecA preprotein cross-linking domain RIV7116_RS20960 PF07516 SecA Wing and Scaffold domain RIV7116_RS20970 PF01894 Uncharacterised protein family UPF0047 RIV7116_RS20980 PF01784 NIF3 (NGG1p interacting factor 3) RIV7116_RS21000 PF12706 Beta-lactamase superfamily domain RIV7116_RS21000 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain RIV7116_RS21025 PF00589 Phage integrase family RIV7116_RS21035 PF00072 Response regulator receiver domain RIV7116_RS21035 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RIV7116_RS21035 PF00512 His Kinase A (phospho-acceptor) domain RIV7116_RS21035 PF08448 PAS fold RIV7116_RS21035 PF13188 PAS domain RIV7116_RS21040 PF00398 Ribosomal RNA adenine dimethylase RIV7116_RS21045 PF00288 GHMP kinases N terminal domain RIV7116_RS21045 PF08544 GHMP kinases C terminal RIV7116_RS21055 PF08713 DNA alkylation repair enzyme RIV7116_RS21095 PF12002 MgsA AAA+ ATPase C terminal RIV7116_RS21095 PF16193 AAA C-terminal domain RIV7116_RS21095 PF00004 ATPase family associated with various cellular activities (AAA) RIV7116_RS21110 PF04244 Deoxyribodipyrimidine photo-lyase-related protein RIV7116_RS21125 PF15919 HicB_like antitoxin of bacterial toxin-antitoxin system RIV7116_RS21130 PF04166 Pyridoxal phosphate biosynthetic protein PdxA RIV7116_RS21135 PF08041 PetM family of cytochrome b6f complex subunit 7 RIV7116_RS21140 PF13460 NAD(P)H-binding RIV7116_RS21145 PF01513 ATP-NAD kinase RIV7116_RS21150 PF00072 Response regulator receiver domain RIV7116_RS21150 PF00486 Transcriptional regulatory protein, C terminal RIV7116_RS21165 PF17275 Family of unknown function (DUF5340) RIV7116_RS21170 PF00218 Indole-3-glycerol phosphate synthase RIV7116_RS21175 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain RIV7116_RS21175 PF07992 Pyridine nucleotide-disulphide oxidoreductase RIV7116_RS21180 PF00563 EAL domain RIV7116_RS21180 PF05231 MASE1 RIV7116_RS21195 PF00111 2Fe-2S iron-sulfur cluster binding domain RIV7116_RS21200 PF00565 Staphylococcal nuclease homologue RIV7116_RS21205 PF00459 Inositol monophosphatase family RIV7116_RS21220 PF01556 DnaJ C terminal domain RIV7116_RS21220 PF00684 DnaJ central domain RIV7116_RS21220 PF00226 DnaJ domain RIV7116_RS21225 PF13393 Histidyl-tRNA synthetase RIV7116_RS21230 PF00037 4Fe-4S binding domain RIV7116_RS21240 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain RIV7116_RS21240 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase RIV7116_RS21245 PF00069 Protein kinase domain RIV7116_RS21250 PF13181 Tetratricopeptide repeat RIV7116_RS21250 PF00535 Glycosyl transferase family 2 RIV7116_RS21265 PF00175 Oxidoreductase NAD-binding domain RIV7116_RS21265 PF00111 2Fe-2S iron-sulfur cluster binding domain RIV7116_RS21265 PF00970 Oxidoreductase FAD-binding domain RIV7116_RS21275 PF00155 Aminotransferase class I and II RIV7116_RS21280 PF00805 Pentapeptide repeats (8 copies) RIV7116_RS21280 PF00069 Protein kinase domain RIV7116_RS21290 PF06838 Methionine gamma-lyase RIV7116_RS21300 PF00487 Fatty acid desaturase RIV7116_RS21305 PF00487 Fatty acid desaturase RIV7116_RS21310 PF00487 Fatty acid desaturase RIV7116_RS21315 PF00171 Aldehyde dehydrogenase family RIV7116_RS21335 PF00885 6,7-dimethyl-8-ribityllumazine synthase RIV7116_RS21340 PF01737 YCF9 RIV7116_RS21375 PF03222 Tryptophan/tyrosine permease family RIV7116_RS21380 PF00132 Bacterial transferase hexapeptide (six repeats) RIV7116_RS21390 PF04960 Glutaminase RIV7116_RS21395 PF00175 Oxidoreductase NAD-binding domain RIV7116_RS21395 PF00970 Oxidoreductase FAD-binding domain RIV7116_RS21395 PF00042 Globin RIV7116_RS21400 PF00892 EamA-like transporter family RIV7116_RS21410 PF02224 Cytidylate kinase RIV7116_RS21420 PF00762 Ferrochelatase RIV7116_RS21435 PF10397 Adenylosuccinate lyase C-terminus RIV7116_RS21435 PF00206 Lyase RIV7116_RS21440 PF00488 MutS domain V RIV7116_RS21440 PF01624 MutS domain I RIV7116_RS21440 PF05188 MutS domain II RIV7116_RS21440 PF05192 MutS domain III RIV7116_RS21440 PF05190 MutS family domain IV RIV7116_RS21450 PF12833 Helix-turn-helix domain RIV7116_RS21455 PF12833 Helix-turn-helix domain RIV7116_RS21470 PF07670 Nucleoside recognition RIV7116_RS21480 PF00694 Aconitase C-terminal domain RIV7116_RS21485 PF00330 Aconitase family (aconitate hydratase) RIV7116_RS21495 PF13847 Methyltransferase domain RIV7116_RS21495 PF03551 Transcriptional regulator PadR-like family RIV7116_RS21505 PF03749 Sugar fermentation stimulation protein RE domain RIV7116_RS21505 PF17746 SfsA N-terminal OB domain RIV7116_RS21535 PF00326 Prolyl oligopeptidase family RIV7116_RS21540 PF00486 Transcriptional regulatory protein, C terminal RIV7116_RS21540 PF00931 NB-ARC domain RIV7116_RS21540 PF03704 Bacterial transcriptional activator domain RIV7116_RS21550 PF06055 Exopolysaccharide synthesis, ExoD RIV7116_RS21570 PF03553 Na+/H+ antiporter family RIV7116_RS21580 PF03781 Sulfatase-modifying factor enzyme 1 RIV7116_RS21585 PF13087 AAA domain RIV7116_RS21585 PF13091 PLD-like domain RIV7116_RS21605 PF02517 CPBP intramembrane metalloprotease RIV7116_RS21610 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ RIV7116_RS21620 PF10674 Protein of unknown function (DUF2488) RIV7116_RS21630 PF02681 Divergent PAP2 family RIV7116_RS21635 PF00348 Polyprenyl synthetase RIV7116_RS21640 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain RIV7116_RS21640 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain RIV7116_RS21650 PF00293 NUDIX domain RIV7116_RS21660 PF01594 AI-2E family transporter RIV7116_RS21665 PF13520 Amino acid permease RIV7116_RS21675 PF00440 Bacterial regulatory proteins, tetR family RIV7116_RS21680 PF13533 Biotin-lipoyl like RIV7116_RS21690 PF00873 AcrB/AcrD/AcrF family RIV7116_RS21710 PF07486 Cell Wall Hydrolase RIV7116_RS21710 PF01471 Putative peptidoglycan binding domain RIV7116_RS21715 PF01042 Endoribonuclease L-PSP RIV7116_RS21720 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family RIV7116_RS21725 PF07690 Major Facilitator Superfamily RIV7116_RS21730 PF04820 Tryptophan halogenase RIV7116_RS21740 PF00196 Bacterial regulatory proteins, luxR family RIV7116_RS21740 PF00072 Response regulator receiver domain RIV7116_RS21745 PF00067 Cytochrome P450 RIV7116_RS21750 PF00355 Rieske [2Fe-2S] domain RIV7116_RS21755 PF00067 Cytochrome P450 RIV7116_RS21760 PF00067 Cytochrome P450 RIV7116_RS21770 PF12773 Double zinc ribbon RIV7116_RS21770 PF00498 FHA domain RIV7116_RS21790 PF00400 WD domain, G-beta repeat RIV7116_RS21790 PF12894 Anaphase-promoting complex subunit 4 WD40 domain RIV7116_RS21810 PF00732 GMC oxidoreductase RIV7116_RS21810 PF05199 GMC oxidoreductase RIV7116_RS21815 PF00591 Glycosyl transferase family, a/b domain RIV7116_RS21815 PF02885 Glycosyl transferase family, helical bundle domain RIV7116_RS21820 PF00395 S-layer homology domain RIV7116_RS21820 PF04966 Carbohydrate-selective porin, OprB family RIV7116_RS21830 PF00291 Pyridoxal-phosphate dependent enzyme RIV7116_RS21835 PF00290 Tryptophan synthase alpha chain RIV7116_RS21840 PF04715 Anthranilate synthase component I, N terminal region RIV7116_RS21840 PF00425 chorismate binding enzyme RIV7116_RS21840 PF00117 Glutamine amidotransferase class-I RIV7116_RS21850 PF18152 DAHP synthase ferredoxin-like domain RIV7116_RS21850 PF00793 DAHP synthetase I family RIV7116_RS21855 PF00005 ABC transporter RIV7116_RS21870 PF00733 Asparagine synthase RIV7116_RS21870 PF13537 Glutamine amidotransferase domain RIV7116_RS21880 PF00211 Adenylate and Guanylate cyclase catalytic domain RIV7116_RS21890 PF01593 Flavin containing amine oxidoreductase RIV7116_RS21900 PF03150 Di-haem cytochrome c peroxidase RIV7116_RS21900 PF00034 Cytochrome c RIV7116_RS21935 PF00664 ABC transporter transmembrane region RIV7116_RS21935 PF00005 ABC transporter RIV7116_RS21950 PF04486 SchA/CurD like domain RIV7116_RS21950 PF03992 Antibiotic biosynthesis monooxygenase RIV7116_RS21960 PF00075 RNase H RIV7116_RS21980 PF01016 Ribosomal L27 protein RIV7116_RS21985 PF00829 Ribosomal prokaryotic L21 protein RIV7116_RS22015 PF02366 Dolichyl-phosphate-mannose-protein mannosyltransferase RIV7116_RS22030 PF02082 Transcriptional regulator RIV7116_RS22035 PF03186 CobD/Cbib protein RIV7116_RS22040 PF00156 Phosphoribosyl transferase domain RIV7116_RS22050 PF00512 His Kinase A (phospho-acceptor) domain RIV7116_RS22050 PF13188 PAS domain RIV7116_RS22050 PF08448 PAS fold RIV7116_RS22050 PF00072 Response regulator receiver domain RIV7116_RS22050 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RIV7116_RS22055 PF00360 Phytochrome region RIV7116_RS22055 PF00990 Diguanylate cyclase, GGDEF domain RIV7116_RS22055 PF01590 GAF domain RIV7116_RS22055 PF00563 EAL domain RIV7116_RS22060 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RIV7116_RS22060 PF08448 PAS fold RIV7116_RS22060 PF00072 Response regulator receiver domain RIV7116_RS22060 PF00512 His Kinase A (phospho-acceptor) domain RIV7116_RS22060 PF13188 PAS domain RIV7116_RS22065 PF02391 MoaE protein RIV7116_RS22080 PF02617 ATP-dependent Clp protease adaptor protein ClpS RIV7116_RS22085 PF01593 Flavin containing amine oxidoreductase RIV7116_RS22090 PF01476 LysM domain RIV7116_RS22090 PF08525 Opacity-associated protein A N-terminal motif RIV7116_RS22090 PF01551 Peptidase family M23 RIV7116_RS22100 PF17969 L,D-transpeptidase C-terminal domain RIV7116_RS22100 PF03734 L,D-transpeptidase catalytic domain RIV7116_RS22105 PF04542 Sigma-70 region 2 RIV7116_RS22105 PF08281 Sigma-70, region 4 RIV7116_RS22120 PF13603 Leucyl-tRNA synthetase, Domain 2 RIV7116_RS22120 PF08264 Anticodon-binding domain of tRNA RIV7116_RS22120 PF00133 tRNA synthetases class I (I, L, M and V) RIV7116_RS22120 PF09334 tRNA synthetases class I (M) RIV7116_RS22125 PF00483 Nucleotidyl transferase RIV7116_RS22130 PF01678 Diaminopimelate epimerase RIV7116_RS22135 PF17676 LD-carboxypeptidase C-terminal domain RIV7116_RS22135 PF02016 LD-carboxypeptidase N-terminal domain RIV7116_RS22145 PF02163 Peptidase family M50 RIV7116_RS22150 PF02163 Peptidase family M50 RIV7116_RS22175 PF01808 AICARFT/IMPCHase bienzyme RIV7116_RS22175 PF02142 MGS-like domain RIV7116_RS22185 PF10742 Protein of unknown function (DUF2555) RIV7116_RS22190 PF02441 Flavoprotein RIV7116_RS22190 PF04127 DNA / pantothenate metabolism flavoprotein RIV7116_RS22195 PF00805 Pentapeptide repeats (8 copies) RIV7116_RS22195 PF00069 Protein kinase domain RIV7116_RS22240 PF07478 D-ala D-ala ligase C-terminus RIV7116_RS22240 PF01820 D-ala D-ala ligase N-terminus RIV7116_RS22255 PF01850 PIN domain RIV7116_RS22270 PF00919 Uncharacterized protein family UPF0004 RIV7116_RS22270 PF04055 Radical SAM superfamily RIV7116_RS22270 PF01938 TRAM domain RIV7116_RS22285 PF03055 Retinal pigment epithelial membrane protein RIV7116_RS22305 PF13417 Glutathione S-transferase, N-terminal domain RIV7116_RS22320 PF00082 Subtilase family RIV7116_RS22320 PF04151 Bacterial pre-peptidase C-terminal domain RIV7116_RS22345 PF04389 Peptidase family M28 RIV7116_RS22360 PF01380 SIS domain RIV7116_RS22385 PF00072 Response regulator receiver domain RIV7116_RS22385 PF01339 CheB methylesterase RIV7116_RS22390 PF00072 Response regulator receiver domain RIV7116_RS22400 PF01590 GAF domain RIV7116_RS22400 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain RIV7116_RS22410 PF01584 CheW-like domain RIV7116_RS22410 PF00072 Response regulator receiver domain RIV7116_RS22410 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RIV7116_RS22410 PF02895 Signal transducing histidine kinase, homodimeric domain RIV7116_RS22410 PF01627 Hpt domain RIV7116_RS22420 PF12697 Alpha/beta hydrolase family RIV7116_RS22420 PF08241 Methyltransferase domain RIV7116_RS22440 PF08032 RNA 2'-O ribose methyltransferase substrate binding RIV7116_RS22440 PF00588 SpoU rRNA Methylase family RIV7116_RS22445 PF00636 Ribonuclease III domain RIV7116_RS22450 PF01740 STAS domain RIV7116_RS22455 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain RIV7116_RS22455 PF00117 Glutamine amidotransferase class-I RIV7116_RS22475 PF04199 Putative cyclase RIV7116_RS22480 PF00350 Dynamin family RIV7116_RS22485 PF00350 Dynamin family RIV7116_RS22490 PF15919 HicB_like antitoxin of bacterial toxin-antitoxin system RIV7116_RS22500 PF00291 Pyridoxal-phosphate dependent enzyme RIV7116_RS22500 PF00571 CBS domain RIV7116_RS22510 PF17265 Family of unknown function (DUF5331) RIV7116_RS22540 PF00069 Protein kinase domain RIV7116_RS22610 PF01969 Protein of unknown function DUF111 RIV7116_RS22615 PF01300 Telomere recombination RIV7116_RS22630 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RIV7116_RS22630 PF00512 His Kinase A (phospho-acceptor) domain RIV7116_RS22635 PF02086 D12 class N6 adenine-specific DNA methyltransferase RIV7116_RS22645 PF02033 Ribosome-binding factor A RIV7116_RS22655 PF00391 PEP-utilising enzyme, mobile domain RIV7116_RS22655 PF02896 PEP-utilising enzyme, TIM barrel domain RIV7116_RS22655 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain RIV7116_RS22660 PF13302 Acetyltransferase (GNAT) domain RIV7116_RS22670 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RIV7116_RS22670 PF00512 His Kinase A (phospho-acceptor) domain RIV7116_RS22670 PF01590 GAF domain RIV7116_RS22670 PF00360 Phytochrome region RIV7116_RS22670 PF08446 PAS fold RIV7116_RS22675 PF00072 Response regulator receiver domain RIV7116_RS22680 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RIV7116_RS22680 PF13426 PAS domain RIV7116_RS22680 PF00512 His Kinase A (phospho-acceptor) domain RIV7116_RS22680 PF00672 HAMP domain RIV7116_RS22730 PF02452 PemK-like, MazF-like toxin of type II toxin-antitoxin system RIV7116_RS22740 PF00440 Bacterial regulatory proteins, tetR family RIV7116_RS22750 PF00106 short chain dehydrogenase RIV7116_RS22765 PF08448 PAS fold RIV7116_RS22765 PF00512 His Kinase A (phospho-acceptor) domain RIV7116_RS22765 PF13188 PAS domain RIV7116_RS22765 PF00072 Response regulator receiver domain RIV7116_RS22765 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RIV7116_RS22770 PF00686 Starch binding domain RIV7116_RS22770 PF00128 Alpha amylase, catalytic domain RIV7116_RS22795 PF12894 Anaphase-promoting complex subunit 4 WD40 domain RIV7116_RS22795 PF00400 WD domain, G-beta repeat RIV7116_RS22800 PF18389 TrmO C-terminal domain RIV7116_RS22800 PF01980 tRNA-methyltransferase O RIV7116_RS22825 PF01152 Bacterial-like globin RIV7116_RS22835 PF02272 DHHA1 domain RIV7116_RS22835 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain RIV7116_RS22835 PF01411 tRNA synthetases class II (A) RIV7116_RS22845 PF00072 Response regulator receiver domain RIV7116_RS22845 PF00990 Diguanylate cyclase, GGDEF domain RIV7116_RS22850 PF00004 ATPase family associated with various cellular activities (AAA) RIV7116_RS22850 PF17862 AAA+ lid domain RIV7116_RS22850 PF01434 Peptidase family M41 RIV7116_RS22855 PF01734 Patatin-like phospholipase RIV7116_RS22890 PF00005 ABC transporter RIV7116_RS22895 PF00395 S-layer homology domain RIV7116_RS22895 PF00963 Cohesin domain RIV7116_RS22910 PF02581 Thiamine monophosphate synthase RIV7116_RS22910 PF17792 ThiD2 family RIV7116_RS22975 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain RIV7116_RS22975 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain RIV7116_RS22975 PF00205 Thiamine pyrophosphate enzyme, central domain RIV7116_RS22980 PF00528 Binding-protein-dependent transport system inner membrane component RIV7116_RS22990 PF00072 Response regulator receiver domain RIV7116_RS22990 PF09308 LuxQ, periplasmic RIV7116_RS22990 PF00512 His Kinase A (phospho-acceptor) domain RIV7116_RS22990 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RIV7116_RS22995 PF00072 Response regulator receiver domain RIV7116_RS23005 PF00805 Pentapeptide repeats (8 copies) RIV7116_RS23005 PF00069 Protein kinase domain RIV7116_RS23010 PF00512 His Kinase A (phospho-acceptor) domain RIV7116_RS23010 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RIV7116_RS23010 PF08448 PAS fold RIV7116_RS23010 PF00072 Response regulator receiver domain RIV7116_RS23010 PF13188 PAS domain RIV7116_RS23040 PF00535 Glycosyl transferase family 2 RIV7116_RS23045 PF00534 Glycosyl transferases group 1 RIV7116_RS23045 PF13439 Glycosyltransferase Family 4 RIV7116_RS23050 PF00534 Glycosyl transferases group 1 RIV7116_RS23050 PF13439 Glycosyltransferase Family 4 RIV7116_RS23055 PF08323 Starch synthase catalytic domain RIV7116_RS23055 PF00534 Glycosyl transferases group 1 RIV7116_RS23100 PF00551 Formyl transferase RIV7116_RS23100 PF01842 ACT domain RIV7116_RS23105 PF00400 WD domain, G-beta repeat RIV7116_RS23105 PF00931 NB-ARC domain RIV7116_RS23115 PF00196 Bacterial regulatory proteins, luxR family RIV7116_RS23115 PF00072 Response regulator receiver domain RIV7116_RS23130 PF00117 Glutamine amidotransferase class-I RIV7116_RS23130 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain RIV7116_RS23140 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RIV7116_RS23140 PF03466 LysR substrate binding domain RIV7116_RS23145 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RIV7116_RS23145 PF00512 His Kinase A (phospho-acceptor) domain RIV7116_RS23150 PF12833 Helix-turn-helix domain RIV7116_RS23150 PF02311 AraC-like ligand binding domain RIV7116_RS23160 PF01979 Amidohydrolase family RIV7116_RS23175 PF00264 Common central domain of tyrosinase RIV7116_RS23210 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) RIV7116_RS23210 PF00128 Alpha amylase, catalytic domain RIV7116_RS23225 PF07228 Stage II sporulation protein E (SpoIIE) RIV7116_RS23225 PF00672 HAMP domain RIV7116_RS23245 PF00361 Proton-conducting membrane transporter RIV7116_RS23270 PF00205 Thiamine pyrophosphate enzyme, central domain RIV7116_RS23270 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain RIV7116_RS23270 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain RIV7116_RS23275 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal RIV7116_RS23275 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III RIV7116_RS23285 PF02492 CobW/HypB/UreG, nucleotide-binding domain RIV7116_RS23285 PF07683 Cobalamin synthesis protein cobW C-terminal domain RIV7116_RS23315 PF01618 MotA/TolQ/ExbB proton channel family RIV7116_RS23335 PF02254 TrkA-N domain RIV7116_RS23335 PF07885 Ion channel RIV7116_RS23350 PF00440 Bacterial regulatory proteins, tetR family RIV7116_RS23350 PF16859 Tetracyclin repressor-like, C-terminal domain RIV7116_RS23360 PF10079 Bacillithiol biosynthesis BshC RIV7116_RS23365 PF13439 Glycosyltransferase Family 4 RIV7116_RS23365 PF00534 Glycosyl transferases group 1 RIV7116_RS23370 PF07690 Major Facilitator Superfamily RIV7116_RS23385 PF08240 Alcohol dehydrogenase GroES-like domain RIV7116_RS23385 PF00107 Zinc-binding dehydrogenase RIV7116_RS23390 PF00248 Aldo/keto reductase family RIV7116_RS23395 PF00400 WD domain, G-beta repeat RIV7116_RS23400 PF00931 NB-ARC domain RIV7116_RS23400 PF00400 WD domain, G-beta repeat RIV7116_RS23425 PF02638 Glycosyl hydrolase-like 10 RIV7116_RS23430 PF00043 Glutathione S-transferase, C-terminal domain RIV7116_RS23430 PF13417 Glutathione S-transferase, N-terminal domain RIV7116_RS23440 PF01494 FAD binding domain RIV7116_RS23445 PF12902 Ferritin-like RIV7116_RS23460 PF01758 Sodium Bile acid symporter family RIV7116_RS23465 PF00395 S-layer homology domain RIV7116_RS23465 PF04966 Carbohydrate-selective porin, OprB family RIV7116_RS23475 PF01547 Bacterial extracellular solute-binding protein RIV7116_RS23500 PF01794 Ferric reductase like transmembrane component RIV7116_RS23505 PF01547 Bacterial extracellular solute-binding protein RIV7116_RS23510 PF00528 Binding-protein-dependent transport system inner membrane component RIV7116_RS23515 PF08402 TOBE domain RIV7116_RS23515 PF00005 ABC transporter RIV7116_RS23520 PF03562 MltA specific insert domain RIV7116_RS23520 PF06725 3D domain RIV7116_RS23525 PF04055 Radical SAM superfamily RIV7116_RS23525 PF06463 Molybdenum Cofactor Synthesis C RIV7116_RS23530 PF00421 Photosystem II protein RIV7116_RS23535 PF00258 Flavodoxin RIV7116_RS23545 PF00421 Photosystem II protein RIV7116_RS23550 PF00421 Photosystem II protein RIV7116_RS23555 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RIV7116_RS23555 PF00512 His Kinase A (phospho-acceptor) domain RIV7116_RS23555 PF00989 PAS fold RIV7116_RS23555 PF13188 PAS domain RIV7116_RS23555 PF13426 PAS domain RIV7116_RS23570 PF06206 CpeT/CpcT family (DUF1001) RIV7116_RS23575 PF00149 Calcineurin-like phosphoesterase RIV7116_RS23615 PF14528 LAGLIDADG-like domain RIV7116_RS23615 PF00772 DnaB-like helicase N terminal domain RIV7116_RS23615 PF03796 DnaB-like helicase C terminal domain RIV7116_RS23615 PF14528 LAGLIDADG-like domain RIV7116_RS23615 PF00772 DnaB-like helicase N terminal domain RIV7116_RS23615 PF03796 DnaB-like helicase C terminal domain RIV7116_RS23690 PF00004 ATPase family associated with various cellular activities (AAA) RIV7116_RS23690 PF01434 Peptidase family M41 RIV7116_RS23690 PF17862 AAA+ lid domain RIV7116_RS23690 PF06480 FtsH Extracellular RIV7116_RS23710 PF03466 LysR substrate binding domain RIV7116_RS23710 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RIV7116_RS23720 PF00107 Zinc-binding dehydrogenase RIV7116_RS23720 PF08240 Alcohol dehydrogenase GroES-like domain RIV7116_RS23730 PF03466 LysR substrate binding domain RIV7116_RS23730 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RIV7116_RS23850 PF13538 UvrD-like helicase C-terminal domain RIV7116_RS23850 PF14490 Helix-hairpin-helix containing domain RIV7116_RS23850 PF18335 ATP-dependent RecD-like DNA helicase SH3 domain RIV7116_RS23860 PF13538 UvrD-like helicase C-terminal domain RIV7116_RS23860 PF18335 ATP-dependent RecD-like DNA helicase SH3 domain RIV7116_RS23860 PF14490 Helix-hairpin-helix containing domain RIV7116_RS23895 PF02824 TGS domain RIV7116_RS23895 PF13291 ACT domain RIV7116_RS23895 PF04607 Region found in RelA / SpoT proteins RIV7116_RS23900 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) RIV7116_RS23900 PF01348 Type II intron maturase RIV7116_RS23905 PF01867 CRISPR associated protein Cas1 RIV7116_RS23910 PF09827 CRISPR associated protein Cas2 RIV7116_RS23965 PF01435 Peptidase family M48 RIV7116_RS23980 PF01435 Peptidase family M48 RIV7116_RS24125 PF04225 Opacity-associated protein A LysM-like domain RIV7116_RS24125 PF01551 Peptidase family M23 RIV7116_RS24130 PF17854 FtsK alpha domain RIV7116_RS24130 PF01580 FtsK/SpoIIIE family RIV7116_RS24180 PF12161 HsdM N-terminal domain RIV7116_RS24180 PF02384 N-6 DNA Methylase RIV7116_RS24195 PF03793 PASTA domain RIV7116_RS24195 PF00069 Protein kinase domain RIV7116_RS24215 PF00005 ABC transporter RIV7116_RS24215 PF00664 ABC transporter transmembrane region RIV7116_RS24215 PF03412 Peptidase C39 family RIV7116_RS24225 PF00400 WD domain, G-beta repeat RIV7116_RS24225 PF00931 NB-ARC domain RIV7116_RS24230 PF00069 Protein kinase domain RIV7116_RS24245 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB RIV7116_RS24245 PF17287 POTRA domain RIV7116_RS24245 PF08479 POTRA domain, ShlB-type RIV7116_RS24320 PF00664 ABC transporter transmembrane region RIV7116_RS24320 PF00005 ABC transporter RIV7116_RS24320 PF03412 Peptidase C39 family RIV7116_RS24325 PF00082 Subtilase family RIV7116_RS24325 PF12951 Passenger-associated-transport-repeat RIV7116_RS24325 PF03797 Autotransporter beta-domain RIV7116_RS24350 PF15919 HicB_like antitoxin of bacterial toxin-antitoxin system RIV7116_RS24395 PF12161 HsdM N-terminal domain RIV7116_RS24395 PF02384 N-6 DNA Methylase RIV7116_RS24400 PF01420 Type I restriction modification DNA specificity domain RIV7116_RS24405 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) RIV7116_RS24405 PF11867 Domain of unknown function (DUF3387) RIV7116_RS24405 PF18766 SWI2/SNF2 ATPase RIV7116_RS24450 PF13401 AAA domain RIV7116_RS24455 PF00665 Integrase core domain RIV7116_RS24455 PF09299 Mu transposase, C-terminal RIV7116_RS24465 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) RIV7116_RS24500 PF01609 Transposase DDE domain RIV7116_RS24500 PF13808 DDE_Tnp_1-associated RIV7116_RS24525 PF00565 Staphylococcal nuclease homologue RIV7116_RS24535 PF00723 Glycosyl hydrolases family 15 RIV7116_RS24540 PF00072 Response regulator receiver domain RIV7116_RS24540 PF00486 Transcriptional regulatory protein, C terminal RIV7116_RS24545 PF13188 PAS domain RIV7116_RS24545 PF13426 PAS domain RIV7116_RS24545 PF00512 His Kinase A (phospho-acceptor) domain RIV7116_RS24545 PF00989 PAS fold RIV7116_RS24545 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RIV7116_RS24560 PF02537 CrcB-like protein, Camphor Resistance (CrcB) RIV7116_RS24560 PF03625 Domain of unknown function DUF302 RIV7116_RS24565 PF03601 Conserved hypothetical protein 698 RIV7116_RS24575 PF01507 Phosphoadenosine phosphosulfate reductase family RIV7116_RS24580 PF14306 PUA-like domain RIV7116_RS24580 PF01747 ATP-sulfurylase RIV7116_RS24585 PF03600 Citrate transporter RIV7116_RS24585 PF02080 TrkA-C domain RIV7116_RS24600 PF00201 UDP-glucoronosyl and UDP-glucosyl transferase RIV7116_RS24600 PF03033 Glycosyltransferase family 28 N-terminal domain RIV7116_RS24610 PF00557 Metallopeptidase family M24 RIV7116_RS24620 PF01590 GAF domain RIV7116_RS24620 PF00990 Diguanylate cyclase, GGDEF domain RIV7116_RS24620 PF00563 EAL domain RIV7116_RS24620 PF00360 Phytochrome region RIV7116_RS24640 PF02136 Nuclear transport factor 2 (NTF2) domain RIV7116_RS24640 PF09150 Orange carotenoid protein, N-terminal RIV7116_RS24665 PF00502 Phycobilisome protein RIV7116_RS24670 PF00072 Response regulator receiver domain RIV7116_RS24680 PF02469 Fasciclin domain RIV7116_RS24685 PF00076 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) RIV7116_RS24690 PF01168 Alanine racemase, N-terminal domain RIV7116_RS24700 PF00805 Pentapeptide repeats (8 copies) RIV7116_RS24715 PF02696 Uncharacterized ACR, YdiU/UPF0061 family RIV7116_RS24725 PF13230 Glutamine amidotransferases class-II RIV7116_RS24730 PF00596 Class II Aldolase and Adducin N-terminal domain RIV7116_RS24740 PF03079 ARD/ARD' family RIV7116_RS24750 PF03441 FAD binding domain of DNA photolyase RIV7116_RS24750 PF00875 DNA photolyase RIV7116_RS24770 PF00004 ATPase family associated with various cellular activities (AAA) RIV7116_RS24770 PF01434 Peptidase family M41 RIV7116_RS24770 PF17862 AAA+ lid domain RIV7116_RS24775 PF01966 HD domain RIV7116_RS24775 PF13286 Phosphohydrolase-associated domain RIV7116_RS24785 PF02894 Oxidoreductase family, C-terminal alpha/beta domain RIV7116_RS24785 PF01408 Oxidoreductase family, NAD-binding Rossmann fold RIV7116_RS24795 PF01165 Ribosomal protein S21 RIV7116_RS24800 PF00076 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) RIV7116_RS24810 PF00202 Aminotransferase class-III RIV7116_RS24815 PF00849 RNA pseudouridylate synthase RIV7116_RS24830 PF03412 Peptidase C39 family RIV7116_RS24830 PF00005 ABC transporter RIV7116_RS24830 PF00664 ABC transporter transmembrane region RIV7116_RS24875 PF00400 WD domain, G-beta repeat RIV7116_RS24875 PF00931 NB-ARC domain RIV7116_RS24880 PF00069 Protein kinase domain RIV7116_RS24910 PF00082 Subtilase family RIV7116_RS24950 PF04055 Radical SAM superfamily RIV7116_RS24950 PF06969 HemN C-terminal domain RIV7116_RS24975 PF00012 Hsp70 protein RIV7116_RS25005 PF00004 ATPase family associated with various cellular activities (AAA) RIV7116_RS25005 PF01434 Peptidase family M41 RIV7116_RS25005 PF17862 AAA+ lid domain RIV7116_RS25005 PF06480 FtsH Extracellular RIV7116_RS25045 PF08479 POTRA domain, ShlB-type RIV7116_RS25045 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB RIV7116_RS25045 PF17287 POTRA domain RIV7116_RS25075 PF08241 Methyltransferase domain RIV7116_RS25080 PF17758 Proteasomal ATPase OB N-terminal domain RIV7116_RS25080 PF16450 Proteasomal ATPase OB C-terminal domain RIV7116_RS25080 PF00004 ATPase family associated with various cellular activities (AAA) RIV7116_RS25190 PF00069 Protein kinase domain RIV7116_RS25190 PF03793 PASTA domain RIV7116_RS25205 PF04474 Protein of unknown function (DUF554) RIV7116_RS25240 PF13977 BetI-type transcriptional repressor, C-terminal RIV7116_RS25240 PF00440 Bacterial regulatory proteins, tetR family RIV7116_RS25310 PF02798 Glutathione S-transferase, N-terminal domain RIV7116_RS25325 PF08241 Methyltransferase domain RIV7116_RS25330 PF00067 Cytochrome P450 RIV7116_RS25345 PF01593 Flavin containing amine oxidoreductase RIV7116_RS25350 PF00107 Zinc-binding dehydrogenase RIV7116_RS25350 PF08240 Alcohol dehydrogenase GroES-like domain RIV7116_RS25365 PF08534 Redoxin RIV7116_RS25370 PF01494 FAD binding domain RIV7116_RS25375 PF00005 ABC transporter RIV7116_RS25375 PF00664 ABC transporter transmembrane region RIV7116_RS25395 PF02788 Ribulose bisphosphate carboxylase large chain, N-terminal domain RIV7116_RS25395 PF00016 Ribulose bisphosphate carboxylase large chain, catalytic domain RIV7116_RS25400 PF13442 Cytochrome C oxidase, cbb3-type, subunit III RIV7116_RS25405 PF02529 Cytochrome B6-F complex subunit 5 RIV7116_RS25415 PF00117 Glutamine amidotransferase class-I RIV7116_RS25480 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain RIV7116_RS25480 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain RIV7116_RS25505 PF00750 tRNA synthetases class I (R) RIV7116_RS25505 PF05746 DALR anticodon binding domain RIV7116_RS25505 PF03485 Arginyl tRNA synthetase N terminal domain RIV7116_RS25540 PF00361 Proton-conducting membrane transporter RIV7116_RS25545 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L RIV7116_RS25570 PF00171 Aldehyde dehydrogenase family RIV7116_RS25595 PF00657 GDSL-like Lipase/Acylhydrolase RIV7116_RS25605 PF01022 Bacterial regulatory protein, arsR family RIV7116_RS25610 PF00403 Heavy-metal-associated domain RIV7116_RS25620 PF00664 ABC transporter transmembrane region RIV7116_RS25620 PF03412 Peptidase C39 family RIV7116_RS25620 PF00005 ABC transporter RIV7116_RS25645 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily RIV7116_RS25660 PF00486 Transcriptional regulatory protein, C terminal RIV7116_RS25660 PF00072 Response regulator receiver domain RIV7116_RS25670 PF07690 Major Facilitator Superfamily RIV7116_RS25675 PF01502 Phosphoribosyl-AMP cyclohydrolase RIV7116_RS25675 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase RIV7116_RS25680 PF00202 Aminotransferase class-III RIV7116_RS25685 PF00069 Protein kinase domain RIV7116_RS25685 PF00805 Pentapeptide repeats (8 copies) RIV7116_RS25690 PF16697 Inner membrane component of T3SS, cytoplasmic domain RIV7116_RS25695 PF00154 recA bacterial DNA recombination protein RIV7116_RS25705 PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP RIV7116_RS25710 PF00692 dUTPase RIV7116_RS25730 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) RIV7116_RS25735 PF00005 ABC transporter RIV7116_RS25740 PF00528 Binding-protein-dependent transport system inner membrane component RIV7116_RS25745 PF00528 Binding-protein-dependent transport system inner membrane component RIV7116_RS25750 PF12849 PBP superfamily domain RIV7116_RS25755 PF04480 Protein of unknown function (DUF559) RIV7116_RS25765 PF01059 NADH-ubiquinone oxidoreductase chain 4, amino terminus RIV7116_RS25765 PF00361 Proton-conducting membrane transporter RIV7116_RS25770 PF01010 NADH-dehyrogenase subunit F, TMs, (complex I) C-terminus RIV7116_RS25770 PF00361 Proton-conducting membrane transporter RIV7116_RS25770 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus RIV7116_RS25790 PF00491 Arginase family RIV7116_RS25795 PF06167 Glucose-regulated metallo-peptidase M90 RIV7116_RS25800 PF00585 C-terminal regulatory domain of Threonine dehydratase RIV7116_RS25800 PF00291 Pyridoxal-phosphate dependent enzyme RIV7116_RS25810 PF00248 Aldo/keto reductase family RIV7116_RS25845 PF00106 short chain dehydrogenase RIV7116_RS25850 PF02136 Nuclear transport factor 2 (NTF2) domain RIV7116_RS25885 PF01494 FAD binding domain RIV7116_RS25915 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit RIV7116_RS25920 PF08450 SMP-30/Gluconolactonase/LRE-like region RIV7116_RS25930 PF00999 Sodium/hydrogen exchanger family RIV7116_RS25930 PF02254 TrkA-N domain RIV7116_RS25930 PF02080 TrkA-C domain RIV7116_RS25940 PF13419 Haloacid dehalogenase-like hydrolase RIV7116_RS25945 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase RIV7116_RS25955 PF08486 Stage II sporulation protein RIV7116_RS25965 PF00753 Metallo-beta-lactamase superfamily RIV7116_RS25965 PF12706 Beta-lactamase superfamily domain RIV7116_RS25980 PF02163 Peptidase family M50 RIV7116_RS25980 PF00571 CBS domain RIV7116_RS25985 PF01207 Dihydrouridine synthase (Dus) RIV7116_RS25995 PF00011 Hsp20/alpha crystallin family RIV7116_RS26015 PF00535 Glycosyl transferase family 2 RIV7116_RS26020 PF00535 Glycosyl transferase family 2 RIV7116_RS26025 PF00132 Bacterial transferase hexapeptide (six repeats) RIV7116_RS26035 PF01569 PAP2 superfamily RIV7116_RS26060 PF08369 Proto-chlorophyllide reductase 57 kD subunit RIV7116_RS26060 PF00148 Nitrogenase component 1 type Oxidoreductase RIV7116_RS26075 PF00497 Bacterial extracellular solute-binding proteins, family 3 RIV7116_RS26080 PF00453 Ribosomal protein L20 RIV7116_RS26085 PF01632 Ribosomal protein L35 RIV7116_RS26090 PF04229 GrpB protein RIV7116_RS26100 PF00106 short chain dehydrogenase RIV7116_RS26105 PF03707 Bacterial signalling protein N terminal repeat RIV7116_RS26105 PF00563 EAL domain RIV7116_RS26105 PF00990 Diguanylate cyclase, GGDEF domain RIV7116_RS26110 PF00174 Oxidoreductase molybdopterin binding domain RIV7116_RS26125 PF12833 Helix-turn-helix domain RIV7116_RS26135 PF01738 Dienelactone hydrolase family RIV7116_RS26140 PF05163 DinB family RIV7116_RS26150 PF04286 Protein of unknown function (DUF445) RIV7116_RS26155 PF01209 ubiE/COQ5 methyltransferase family RIV7116_RS26160 PF00158 Sigma-54 interaction domain RIV7116_RS26160 PF00072 Response regulator receiver domain RIV7116_RS26160 PF02954 Bacterial regulatory protein, Fis family RIV7116_RS26165 PF18579 Rubisco accumulation factor 1 helix turn helix domain RIV7116_RS26165 PF18578 Rubisco accumulation factor 1 alpha helical domain RIV7116_RS26165 PF18087 Rubisco Assembly chaperone C-terminal domain RIV7116_RS26170 PF03806 AbgT putative transporter family RIV7116_RS26190 PF01425 Amidase RIV7116_RS26205 PF03793 PASTA domain RIV7116_RS26205 PF00069 Protein kinase domain RIV7116_RS26210 PF08239 Bacterial SH3 domain RIV7116_RS26210 PF00069 Protein kinase domain RIV7116_RS26245 PF00563 EAL domain RIV7116_RS26245 PF00360 Phytochrome region RIV7116_RS26245 PF00990 Diguanylate cyclase, GGDEF domain RIV7116_RS26245 PF01590 GAF domain RIV7116_RS26255 PF00069 Protein kinase domain RIV7116_RS26255 PF00805 Pentapeptide repeats (8 copies) RIV7116_RS26260 PF00069 Protein kinase domain RIV7116_RS26260 PF00805 Pentapeptide repeats (8 copies) RIV7116_RS26270 PF01106 NifU-like domain RIV7116_RS26300 PF01270 Glycosyl hydrolases family 8 RIV7116_RS26310 PF03552 Cellulose synthase RIV7116_RS26310 PF07238 PilZ domain RIV7116_RS26310 PF00535 Glycosyl transferase family 2 RIV7116_RS26315 PF00072 Response regulator receiver domain RIV7116_RS26315 PF01627 Hpt domain RIV7116_RS26315 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) RIV7116_RS26315 PF00512 His Kinase A (phospho-acceptor) domain RIV7116_RS26315 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RIV7116_RS26315 PF00672 HAMP domain RIV7116_RS26325 PF00009 Elongation factor Tu GTP binding domain RIV7116_RS26325 PF03144 Elongation factor Tu domain 2 RIV7116_RS26325 PF00679 Elongation factor G C-terminus RIV7116_RS26325 PF06421 GTP-binding protein LepA C-terminus RIV7116_RS26350 PF01699 Sodium/calcium exchanger protein RIV7116_RS26360 PF00072 Response regulator receiver domain RIV7116_RS26365 PF00672 HAMP domain RIV7116_RS26365 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) RIV7116_RS26365 PF00072 Response regulator receiver domain RIV7116_RS26365 PF01627 Hpt domain RIV7116_RS26365 PF00512 His Kinase A (phospho-acceptor) domain RIV7116_RS26365 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RIV7116_RS26405 PF01634 ATP phosphoribosyltransferase RIV7116_RS26410 PF00486 Transcriptional regulatory protein, C terminal RIV7116_RS26410 PF00072 Response regulator receiver domain RIV7116_RS26435 PF11954 Domain of unknown function (DUF3471) RIV7116_RS26435 PF00144 Beta-lactamase RIV7116_RS26440 PF02322 Cytochrome bd terminal oxidase subunit II RIV7116_RS26445 PF01654 Cytochrome bd terminal oxidase subunit I RIV7116_RS26450 PF00753 Metallo-beta-lactamase superfamily RIV7116_RS26455 PF00581 Rhodanese-like domain RIV7116_RS26455 PF00899 ThiF family RIV7116_RS26465 PF00400 WD domain, G-beta repeat RIV7116_RS26465 PF00805 Pentapeptide repeats (8 copies) RIV7116_RS26465 PF05729 NACHT domain RIV7116_RS26470 PF00230 Major intrinsic protein RIV7116_RS26475 PF11799 impB/mucB/samB family C-terminal domain RIV7116_RS26475 PF00817 impB/mucB/samB family RIV7116_RS26475 PF11798 IMS family HHH motif RIV7116_RS26475 PF13438 Domain of unknown function (DUF4113) RIV7116_RS26480 PF00717 Peptidase S24-like RIV7116_RS26490 PF12795 Mechanosensitive ion channel porin domain RIV7116_RS26490 PF00924 Mechanosensitive ion channel RIV7116_RS26490 PF12794 Mechanosensitive ion channel inner membrane domain 1 RIV7116_RS26500 PF07885 Ion channel RIV7116_RS26500 PF00027 Cyclic nucleotide-binding domain RIV7116_RS26505 PF12794 Mechanosensitive ion channel inner membrane domain 1 RIV7116_RS26505 PF12795 Mechanosensitive ion channel porin domain RIV7116_RS26505 PF00924 Mechanosensitive ion channel RIV7116_RS26510 PF00072 Response regulator receiver domain RIV7116_RS26510 PF09308 LuxQ, periplasmic RIV7116_RS26510 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RIV7116_RS26510 PF00512 His Kinase A (phospho-acceptor) domain RIV7116_RS26515 PF00072 Response regulator receiver domain RIV7116_RS26515 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RIV7116_RS26515 PF00512 His Kinase A (phospho-acceptor) domain RIV7116_RS26515 PF09308 LuxQ, periplasmic RIV7116_RS26525 PF02706 Chain length determinant protein RIV7116_RS26525 PF13807 G-rich domain on putative tyrosine kinase RIV7116_RS26525 PF13614 AAA domain RIV7116_RS26530 PF00535 Glycosyl transferase family 2 RIV7116_RS26535 PF01943 Polysaccharide biosynthesis protein RIV7116_RS26550 PF00534 Glycosyl transferases group 1 RIV7116_RS26550 PF13439 Glycosyltransferase Family 4 RIV7116_RS26575 PF03808 Glycosyl transferase WecB/TagA/CpsF family RIV7116_RS26580 PF02397 Bacterial sugar transferase RIV7116_RS26590 PF00005 ABC transporter RIV7116_RS26595 PF00528 Binding-protein-dependent transport system inner membrane component RIV7116_RS26600 PF00528 Binding-protein-dependent transport system inner membrane component RIV7116_RS26605 PF12849 PBP superfamily domain RIV7116_RS26615 PF01618 MotA/TolQ/ExbB proton channel family RIV7116_RS26635 PF06470 SMC proteins Flexible Hinge Domain RIV7116_RS26635 PF02463 RecF/RecN/SMC N terminal domain RIV7116_RS26660 PF00067 Cytochrome P450 RIV7116_RS26665 PF08241 Methyltransferase domain RIV7116_RS26680 PF00733 Asparagine synthase RIV7116_RS26680 PF13537 Glutamine amidotransferase domain RIV7116_RS26690 PF01078 Magnesium chelatase, subunit ChlI RIV7116_RS26690 PF13335 Magnesium chelatase, subunit ChlI C-terminal RIV7116_RS26700 PF01230 HIT domain RIV7116_RS26705 PF00124 Photosynthetic reaction centre protein RIV7116_RS26720 PF00633 Helix-hairpin-helix motif RIV7116_RS26720 PF02132 RecR protein RIV7116_RS26720 PF13662 Toprim domain RIV7116_RS26725 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RIV7116_RS26725 PF03466 LysR substrate binding domain RIV7116_RS26735 PF03109 ABC1 family RIV7116_RS26750 PF00069 Protein kinase domain RIV7116_RS26760 PF03702 Anhydro-N-acetylmuramic acid kinase RIV7116_RS26765 PF02669 K+-transporting ATPase, c chain RIV7116_RS26775 PF03814 Potassium-transporting ATPase A subunit RIV7116_RS26780 PF00360 Phytochrome region RIV7116_RS26780 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RIV7116_RS26780 PF01590 GAF domain RIV7116_RS26780 PF08446 PAS fold RIV7116_RS26780 PF00512 His Kinase A (phospho-acceptor) domain RIV7116_RS26785 PF00072 Response regulator receiver domain RIV7116_RS26785 PF04397 LytTr DNA-binding domain RIV7116_RS26790 PF07689 KaiB domain RIV7116_RS26795 PF06745 KaiC RIV7116_RS26800 PF00512 His Kinase A (phospho-acceptor) domain RIV7116_RS26800 PF00072 Response regulator receiver domain RIV7116_RS26800 PF09308 LuxQ, periplasmic RIV7116_RS26800 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RIV7116_RS26805 PF18319 PriA DNA helicase Cys-rich region (CRR) domain RIV7116_RS26805 PF00270 DEAD/DEAH box helicase RIV7116_RS26805 PF00271 Helicase conserved C-terminal domain RIV7116_RS26805 PF17764 3′ DNA-binding domain (3′BD) RIV7116_RS26805 PF18074 Primosomal protein N C-terminal domain RIV7116_RS26810 PF04545 Sigma-70, region 4 RIV7116_RS26810 PF04539 Sigma-70 region 3 RIV7116_RS26810 PF04542 Sigma-70 region 2 RIV7116_RS26810 PF00140 Sigma-70 factor, region 1.2 RIV7116_RS26820 PF00583 Acetyltransferase (GNAT) family RIV7116_RS26825 PF13442 Cytochrome C oxidase, cbb3-type, subunit III RIV7116_RS26840 PF00128 Alpha amylase, catalytic domain RIV7116_RS26840 PF09154 Domain of unknown function (DUF1939) RIV7116_RS26845 PF00072 Response regulator receiver domain RIV7116_RS26850 PF00512 His Kinase A (phospho-acceptor) domain RIV7116_RS26850 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RIV7116_RS26850 PF09308 LuxQ, periplasmic RIV7116_RS26850 PF00072 Response regulator receiver domain RIV7116_RS26860 PF00528 Binding-protein-dependent transport system inner membrane component RIV7116_RS26890 PF13932 GidA associated domain RIV7116_RS26890 PF01134 Glucose inhibited division protein A RIV7116_RS26900 PF17284 Spermidine synthase tetramerisation domain RIV7116_RS26905 PF04191 Phospholipid methyltransferase RIV7116_RS26910 PF00793 DAHP synthetase I family RIV7116_RS26930 PF00106 short chain dehydrogenase RIV7116_RS26950 PF03965 Penicillinase repressor RIV7116_RS26955 PF04029 2-phosphosulpholactate phosphatase RIV7116_RS26960 PF03466 LysR substrate binding domain RIV7116_RS26960 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RIV7116_RS26975 PF13545 Crp-like helix-turn-helix domain RIV7116_RS26975 PF00027 Cyclic nucleotide-binding domain RIV7116_RS26990 PF00936 BMC domain RIV7116_RS26995 PF00936 BMC domain RIV7116_RS27005 PF00132 Bacterial transferase hexapeptide (six repeats) RIV7116_RS27005 PF12804 MobA-like NTP transferase domain RIV7116_RS27010 PF02625 XdhC and CoxI family RIV7116_RS27010 PF13478 XdhC Rossmann domain RIV7116_RS27015 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain RIV7116_RS27015 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase RIV7116_RS27020 PF03450 CO dehydrogenase flavoprotein C-terminal domain RIV7116_RS27020 PF00941 FAD binding domain in molybdopterin dehydrogenase RIV7116_RS27025 PF01799 [2Fe-2S] binding domain RIV7116_RS27025 PF10518 TAT (twin-arginine translocation) pathway signal sequence RIV7116_RS27025 PF00111 2Fe-2S iron-sulfur cluster binding domain RIV7116_RS27030 PF03448 MgtE intracellular N domain RIV7116_RS27030 PF01769 Divalent cation transporter RIV7116_RS27030 PF00571 CBS domain RIV7116_RS27045 PF00069 Protein kinase domain RIV7116_RS27070 PF07687 Peptidase dimerisation domain RIV7116_RS27070 PF01546 Peptidase family M20/M25/M40 RIV7116_RS27085 PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family RIV7116_RS27110 PF07992 Pyridine nucleotide-disulphide oxidoreductase RIV7116_RS27125 PF00498 FHA domain RIV7116_RS27125 PF12773 Double zinc ribbon RIV7116_RS27130 PF08448 PAS fold RIV7116_RS27130 PF00512 His Kinase A (phospho-acceptor) domain RIV7116_RS27130 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RIV7116_RS27130 PF13188 PAS domain RIV7116_RS27130 PF00072 Response regulator receiver domain RIV7116_RS27160 PF00145 C-5 cytosine-specific DNA methylase RIV7116_RS27170 PF13188 PAS domain RIV7116_RS27170 PF00072 Response regulator receiver domain RIV7116_RS27170 PF00512 His Kinase A (phospho-acceptor) domain RIV7116_RS27170 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RIV7116_RS27170 PF08448 PAS fold RIV7116_RS27175 PF01926 50S ribosome-binding GTPase RIV7116_RS27175 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal RIV7116_RS27180 PF08240 Alcohol dehydrogenase GroES-like domain RIV7116_RS27180 PF00107 Zinc-binding dehydrogenase RIV7116_RS27205 PF12833 Helix-turn-helix domain RIV7116_RS27215 PF03062 MBOAT, membrane-bound O-acyltransferase family RIV7116_RS27235 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain RIV7116_RS27235 PF07992 Pyridine nucleotide-disulphide oxidoreductase RIV7116_RS27240 PF09335 SNARE associated Golgi protein RIV7116_RS27245 PF09335 SNARE associated Golgi protein RIV7116_RS27250 PF00535 Glycosyl transferase family 2 RIV7116_RS27260 PF00072 Response regulator receiver domain RIV7116_RS27260 PF00196 Bacterial regulatory proteins, luxR family RIV7116_RS27265 PF07730 Histidine kinase RIV7116_RS27280 PF00005 ABC transporter RIV7116_RS27280 PF02687 FtsX-like permease family RIV7116_RS27280 PF12704 MacB-like periplasmic core domain RIV7116_RS27285 PF00005 ABC transporter RIV7116_RS27295 PF01593 Flavin containing amine oxidoreductase RIV7116_RS27300 PF04069 Substrate binding domain of ABC-type glycine betaine transport system RIV7116_RS27305 PF00528 Binding-protein-dependent transport system inner membrane component RIV7116_RS27310 PF00571 CBS domain RIV7116_RS27310 PF00005 ABC transporter RIV7116_RS27335 PF00970 Oxidoreductase FAD-binding domain RIV7116_RS27335 PF00175 Oxidoreductase NAD-binding domain RIV7116_RS27335 PF00111 2Fe-2S iron-sulfur cluster binding domain RIV7116_RS27385 PF05991 YacP-like NYN domain RIV7116_RS27390 PF00005 ABC transporter RIV7116_RS27400 PF00124 Photosynthetic reaction centre protein RIV7116_RS27405 PF04966 Carbohydrate-selective porin, OprB family RIV7116_RS27405 PF00395 S-layer homology domain RIV7116_RS27410 PF02082 Transcriptional regulator RIV7116_RS27415 PF00291 Pyridoxal-phosphate dependent enzyme RIV7116_RS27420 PF00684 DnaJ central domain RIV7116_RS27420 PF01556 DnaJ C terminal domain RIV7116_RS27420 PF00226 DnaJ domain RIV7116_RS27425 PF00072 Response regulator receiver domain RIV7116_RS27435 PF05175 Methyltransferase small domain RIV7116_RS27445 PF01433 Peptidase family M1 domain RIV7116_RS27445 PF11838 ERAP1-like C-terminal domain RIV7116_RS27450 PF00534 Glycosyl transferases group 1 RIV7116_RS27455 PF13439 Glycosyltransferase Family 4 RIV7116_RS27455 PF00534 Glycosyl transferases group 1 RIV7116_RS27460 PF13614 AAA domain RIV7116_RS27460 PF02706 Chain length determinant protein RIV7116_RS27460 PF13807 G-rich domain on putative tyrosine kinase RIV7116_RS27470 PF00534 Glycosyl transferases group 1 RIV7116_RS27470 PF13439 Glycosyltransferase Family 4 RIV7116_RS27475 PF00535 Glycosyl transferase family 2 RIV7116_RS27485 PF00535 Glycosyl transferase family 2 RIV7116_RS27510 PF03109 ABC1 family RIV7116_RS27540 PF00534 Glycosyl transferases group 1 RIV7116_RS27540 PF13439 Glycosyltransferase Family 4 RIV7116_RS27545 PF00005 ABC transporter RIV7116_RS27545 PF00664 ABC transporter transmembrane region RIV7116_RS27555 PF00753 Metallo-beta-lactamase superfamily RIV7116_RS27555 PF16123 Hydroxyacylglutathione hydrolase C-terminus RIV7116_RS27575 PF17782 DprA winged helix domain RIV7116_RS27575 PF02481 DNA recombination-mediator protein A RIV7116_RS27595 PF00211 Adenylate and Guanylate cyclase catalytic domain RIV7116_RS27600 PF00106 short chain dehydrogenase RIV7116_RS27610 PF05145 Transition state regulatory protein AbrB RIV7116_RS27615 PF00072 Response regulator receiver domain RIV7116_RS27615 PF13188 PAS domain RIV7116_RS27615 PF08448 PAS fold RIV7116_RS27615 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RIV7116_RS27615 PF00512 His Kinase A (phospho-acceptor) domain RIV7116_RS27620 PF02743 Cache domain RIV7116_RS27620 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RIV7116_RS27620 PF00512 His Kinase A (phospho-acceptor) domain RIV7116_RS27625 PF02798 Glutathione S-transferase, N-terminal domain RIV7116_RS27635 PF08448 PAS fold RIV7116_RS27635 PF03705 CheR methyltransferase, all-alpha domain RIV7116_RS27635 PF01739 CheR methyltransferase, SAM binding domain RIV7116_RS27635 PF01339 CheB methylesterase RIV7116_RS27640 PF00171 Aldehyde dehydrogenase family RIV7116_RS27650 PF03129 Anticodon binding domain RIV7116_RS27650 PF13393 Histidyl-tRNA synthetase RIV7116_RS27670 PF00194 Eukaryotic-type carbonic anhydrase RIV7116_RS27680 PF12894 Anaphase-promoting complex subunit 4 WD40 domain RIV7116_RS27680 PF00400 WD domain, G-beta repeat RIV7116_RS27690 PF17863 AAA lid domain RIV7116_RS27690 PF01078 Magnesium chelatase, subunit ChlI RIV7116_RS27700 PF00171 Aldehyde dehydrogenase family RIV7116_RS27720 PF01370 NAD dependent epimerase/dehydratase family RIV7116_RS27725 PF08448 PAS fold RIV7116_RS27725 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RIV7116_RS27725 PF08447 PAS fold RIV7116_RS27730 PF00069 Protein kinase domain RIV7116_RS27730 PF00805 Pentapeptide repeats (8 copies) RIV7116_RS27735 PF00892 EamA-like transporter family RIV7116_RS27745 PF09157 Pseudouridine synthase II TruB, C-terminal RIV7116_RS27745 PF01509 TruB family pseudouridylate synthase (N terminal domain) RIV7116_RS27760 PF01678 Diaminopimelate epimerase RIV7116_RS27770 PF00999 Sodium/hydrogen exchanger family RIV7116_RS27770 PF02254 TrkA-N domain RIV7116_RS27775 PF13188 PAS domain RIV7116_RS27775 PF08448 PAS fold RIV7116_RS27775 PF00512 His Kinase A (phospho-acceptor) domain RIV7116_RS27775 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RIV7116_RS27775 PF00072 Response regulator receiver domain RIV7116_RS27780 PF00875 DNA photolyase RIV7116_RS27780 PF03441 FAD binding domain of DNA photolyase RIV7116_RS27790 PF09308 LuxQ, periplasmic RIV7116_RS27790 PF00072 Response regulator receiver domain RIV7116_RS27790 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RIV7116_RS27790 PF00512 His Kinase A (phospho-acceptor) domain RIV7116_RS27795 PF01497 Periplasmic binding protein RIV7116_RS27805 PF16485 Protealysin propeptide RIV7116_RS27805 PF01447 Thermolysin metallopeptidase, catalytic domain RIV7116_RS27805 PF02868 Thermolysin metallopeptidase, alpha-helical domain RIV7116_RS27815 PF12794 Mechanosensitive ion channel inner membrane domain 1 RIV7116_RS27815 PF12795 Mechanosensitive ion channel porin domain RIV7116_RS27815 PF00924 Mechanosensitive ion channel RIV7116_RS27820 PF00248 Aldo/keto reductase family RIV7116_RS27855 PF01171 PP-loop family RIV7116_RS27880 PF00155 Aminotransferase class I and II RIV7116_RS27915 PF01435 Peptidase family M48 RIV7116_RS27925 PF01336 OB-fold nucleic acid binding domain RIV7116_RS27925 PF00152 tRNA synthetases class II (D, K and N) RIV7116_RS27925 PF02938 GAD domain RIV7116_RS27950 PF01943 Polysaccharide biosynthesis protein RIV7116_RS27955 PF00535 Glycosyl transferase family 2 RIV7116_RS27965 PF00535 Glycosyl transferase family 2 RIV7116_RS27970 PF01501 Glycosyl transferase family 8 RIV7116_RS27970 PF00535 Glycosyl transferase family 2 RIV7116_RS27980 PF00942 Cellulose binding domain RIV7116_RS27980 PF03442 Carbohydrate binding domain X2 RIV7116_RS27990 PF02397 Bacterial sugar transferase RIV7116_RS27995 PF00132 Bacterial transferase hexapeptide (six repeats) RIV7116_RS28010 PF00149 Calcineurin-like phosphoesterase RIV7116_RS28010 PF10518 TAT (twin-arginine translocation) pathway signal sequence RIV7116_RS28015 PF04752 ChaC-like protein RIV7116_RS28025 PF02541 Ppx/GppA phosphatase family RIV7116_RS28030 PF01040 UbiA prenyltransferase family RIV7116_RS28055 PF17991 Thioredoxin like C-terminal domain RIV7116_RS28055 PF02683 Cytochrome C biogenesis protein transmembrane region RIV7116_RS28055 PF00578 AhpC/TSA family RIV7116_RS28065 PF00223 Photosystem I psaA/psaB protein RIV7116_RS28070 PF00223 Photosystem I psaA/psaB protein RIV7116_RS28085 PF01555 DNA methylase RIV7116_RS28105 PF00069 Protein kinase domain RIV7116_RS28105 PF03793 PASTA domain RIV7116_RS28110 PF07244 Surface antigen variable number repeat RIV7116_RS28110 PF01103 Surface antigen RIV7116_RS28120 PF01885 RNA 2'-phosphotransferase, Tpt1 / KptA family RIV7116_RS28130 PF00805 Pentapeptide repeats (8 copies) RIV7116_RS28130 PF00069 Protein kinase domain RIV7116_RS28150 PF03652 Holliday junction resolvase RIV7116_RS28175 PF03636 Glycosyl hydrolase family 65, N-terminal domain RIV7116_RS28175 PF03633 Glycosyl hydrolase family 65, C-terminal domain RIV7116_RS28175 PF03632 Glycosyl hydrolase family 65 central catalytic domain RIV7116_RS28180 PF13419 Haloacid dehalogenase-like hydrolase RIV7116_RS28190 PF00266 Aminotransferase class-V RIV7116_RS28195 PF02075 Crossover junction endodeoxyribonuclease RuvC RIV7116_RS28200 PF01933 Uncharacterised protein family UPF0052 RIV7116_RS28210 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE RIV7116_RS28215 PF01979 Amidohydrolase family RIV7116_RS28220 PF10502 Signal peptidase, peptidase S26 RIV7116_RS28225 PF03707 Bacterial signalling protein N terminal repeat RIV7116_RS28225 PF00990 Diguanylate cyclase, GGDEF domain RIV7116_RS28225 PF00563 EAL domain RIV7116_RS28250 PF00145 C-5 cytosine-specific DNA methylase RIV7116_RS28255 PF02567 Phenazine biosynthesis-like protein RIV7116_RS28260 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ RIV7116_RS28265 PF00392 Bacterial regulatory proteins, gntR family RIV7116_RS28265 PF00155 Aminotransferase class I and II RIV7116_RS28270 PF00892 EamA-like transporter family RIV7116_RS28300 PF01018 GTP1/OBG RIV7116_RS28300 PF01926 50S ribosome-binding GTPase RIV7116_RS28310 PF02016 LD-carboxypeptidase N-terminal domain RIV7116_RS28310 PF17676 LD-carboxypeptidase C-terminal domain RIV7116_RS28315 PF00534 Glycosyl transferases group 1 RIV7116_RS28315 PF13579 Glycosyl transferase 4-like domain RIV7116_RS28330 PF00892 EamA-like transporter family RIV7116_RS28350 PF03099 Biotin/lipoate A/B protein ligase family RIV7116_RS28355 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein RIV7116_RS28355 PF16321 Sigma 54 modulation/S30EA ribosomal protein C terminus RIV7116_RS28370 PF00012 Hsp70 protein RIV7116_RS28385 PF01207 Dihydrouridine synthase (Dus) RIV7116_RS28420 PF07690 Major Facilitator Superfamily RIV7116_RS28425 PF00529 HlyD membrane-fusion protein of T1SS RIV7116_RS28425 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion RIV7116_RS28445 PF02673 Bacitracin resistance protein BacA RIV7116_RS28450 PF02673 Bacitracin resistance protein BacA RIV7116_RS28460 PF06514 Photosystem II 12 kDa extrinsic protein (PsbU) RIV7116_RS28465 PF02910 Fumarate reductase flavoprotein C-term RIV7116_RS28465 PF00890 FAD binding domain RIV7116_RS28475 PF00563 EAL domain RIV7116_RS28475 PF00990 Diguanylate cyclase, GGDEF domain RIV7116_RS28475 PF03707 Bacterial signalling protein N terminal repeat RIV7116_RS28480 PF07884 Vitamin K epoxide reductase family RIV7116_RS28485 PF03437 BtpA family RIV7116_RS28490 PF04055 Radical SAM superfamily RIV7116_RS28490 PF18693 TRAM domain RIV7116_RS28490 PF00919 Uncharacterized protein family UPF0004 RIV7116_RS28495 PF00271 Helicase conserved C-terminal domain RIV7116_RS28495 PF00270 DEAD/DEAH box helicase RIV7116_RS28500 PF00248 Aldo/keto reductase family RIV7116_RS28505 PF03209 PUCC protein RIV7116_RS28510 PF00459 Inositol monophosphatase family RIV7116_RS28515 PF09383 NIL domain RIV7116_RS28515 PF00005 ABC transporter RIV7116_RS28545 PF00083 Sugar (and other) transporter RIV7116_RS28560 PF00355 Rieske [2Fe-2S] domain RIV7116_RS28565 PF00155 Aminotransferase class I and II RIV7116_RS28580 PF01073 3-beta hydroxysteroid dehydrogenase/isomerase family RIV7116_RS28600 PF01040 UbiA prenyltransferase family RIV7116_RS28605 PF02374 Anion-transporting ATPase RIV7116_RS28605 PF17886 HSP20-like domain found in ArsA RIV7116_RS28615 PF01061 ABC-2 type transporter RIV7116_RS28620 PF16363 GDP-mannose 4,6 dehydratase RIV7116_RS28625 PF00005 ABC transporter RIV7116_RS28630 PF13649 Methyltransferase domain RIV7116_RS28650 PF16363 GDP-mannose 4,6 dehydratase RIV7116_RS28655 PF00534 Glycosyl transferases group 1 RIV7116_RS28655 PF00862 Sucrose synthase RIV7116_RS28660 PF00534 Glycosyl transferases group 1 RIV7116_RS28660 PF13439 Glycosyltransferase Family 4 RIV7116_RS28665 PF00005 ABC transporter RIV7116_RS28675 PF00535 Glycosyl transferase family 2 RIV7116_RS28680 PF00535 Glycosyl transferase family 2 RIV7116_RS28685 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase RIV7116_RS28690 PF00188 Cysteine-rich secretory protein family RIV7116_RS28700 PF04321 RmlD substrate binding domain RIV7116_RS28705 PF00483 Nucleotidyl transferase RIV7116_RS28715 PF02887 Pyruvate kinase, alpha/beta domain RIV7116_RS28715 PF00391 PEP-utilising enzyme, mobile domain RIV7116_RS28715 PF00224 Pyruvate kinase, barrel domain RIV7116_RS28735 PF01343 Peptidase family S49 RIV7116_RS28745 PF02405 Permease MlaE RIV7116_RS28760 PF02660 Glycerol-3-phosphate acyltransferase RIV7116_RS28770 PF13847 Methyltransferase domain RIV7116_RS28780 PF00550 Phosphopantetheine attachment site RIV7116_RS28780 PF07993 Male sterility protein RIV7116_RS28785 PF01208 Uroporphyrinogen decarboxylase (URO-D) RIV7116_RS28790 PF01139 tRNA-splicing ligase RtcB RIV7116_RS28800 PF00149 Calcineurin-like phosphoesterase RIV7116_RS28800 PF10518 TAT (twin-arginine translocation) pathway signal sequence RIV7116_RS28805 PF01926 50S ribosome-binding GTPase RIV7116_RS28805 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal RIV7116_RS28810 PF02361 Cobalt transport protein RIV7116_RS28815 PF00425 chorismate binding enzyme RIV7116_RS28815 PF04715 Anthranilate synthase component I, N terminal region RIV7116_RS28825 PF01168 Alanine racemase, N-terminal domain RIV7116_RS28830 PF04472 Cell division protein SepF RIV7116_RS28835 PF03807 NADP oxidoreductase coenzyme F420-dependent RIV7116_RS28835 PF14748 Pyrroline-5-carboxylate reductase dimerisation RIV7116_RS28840 PF00271 Helicase conserved C-terminal domain RIV7116_RS28840 PF00270 DEAD/DEAH box helicase RIV7116_RS28840 PF08148 DSHCT (NUC185) domain RIV7116_RS28845 PF05685 Putative restriction endonuclease RIV7116_RS28855 PF00132 Bacterial transferase hexapeptide (six repeats) RIV7116_RS28865 PF00355 Rieske [2Fe-2S] domain RIV7116_RS28875 PF00355 Rieske [2Fe-2S] domain RIV7116_RS28895 PF00355 Rieske [2Fe-2S] domain RIV7116_RS28905 PF09278 MerR, DNA binding RIV7116_RS28905 PF00376 MerR family regulatory protein RIV7116_RS28925 PF13188 PAS domain RIV7116_RS28925 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RIV7116_RS28925 PF00072 Response regulator receiver domain RIV7116_RS28925 PF00512 His Kinase A (phospho-acceptor) domain RIV7116_RS28925 PF08448 PAS fold RIV7116_RS28945 PF01262 Alanine dehydrogenase/PNT, C-terminal domain RIV7116_RS28945 PF05222 Alanine dehydrogenase/PNT, N-terminal domain RIV7116_RS28950 PF00069 Protein kinase domain RIV7116_RS28960 PF00245 Alkaline phosphatase RIV7116_RS28965 PF03009 Glycerophosphoryl diester phosphodiesterase family RIV7116_RS28980 PF00005 ABC transporter RIV7116_RS28985 PF01494 FAD binding domain RIV7116_RS28990 PF00724 NADH:flavin oxidoreductase / NADH oxidase family RIV7116_RS28995 PF01638 HxlR-like helix-turn-helix RIV7116_RS29000 PF00561 alpha/beta hydrolase fold RIV7116_RS29050 PF00248 Aldo/keto reductase family RIV7116_RS29060 PF13619 KTSC domain RIV7116_RS29085 PF01625 Peptide methionine sulfoxide reductase RIV7116_RS29095 PF00069 Protein kinase domain RIV7116_RS29100 PF00149 Calcineurin-like phosphoesterase RIV7116_RS29125 PF07859 alpha/beta hydrolase fold RIV7116_RS29145 PF01070 FMN-dependent dehydrogenase RIV7116_RS29150 PF01343 Peptidase family S49 RIV7116_RS29155 PF00067 Cytochrome P450 RIV7116_RS29170 PF00487 Fatty acid desaturase RIV7116_RS29215 PF00258 Flavodoxin RIV7116_RS29215 PF01613 Flavin reductase like domain RIV7116_RS29225 PF00753 Metallo-beta-lactamase superfamily RIV7116_RS29225 PF01613 Flavin reductase like domain RIV7116_RS29240 PF00881 Nitroreductase family RIV7116_RS29270 PF06150 ChaB RIV7116_RS29280 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) RIV7116_RS29280 PF00072 Response regulator receiver domain RIV7116_RS29280 PF01627 Hpt domain RIV7116_RS29280 PF00672 HAMP domain RIV7116_RS29280 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RIV7116_RS29280 PF00512 His Kinase A (phospho-acceptor) domain RIV7116_RS29285 PF02875 Mur ligase family, glutamate ligase domain RIV7116_RS29285 PF01225 Mur ligase family, catalytic domain RIV7116_RS29285 PF08245 Mur ligase middle domain RIV7116_RS29295 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RIV7116_RS29295 PF08447 PAS fold RIV7116_RS29295 PF08448 PAS fold RIV7116_RS29300 PF01507 Phosphoadenosine phosphosulfate reductase family RIV7116_RS29325 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB RIV7116_RS29325 PF17287 POTRA domain RIV7116_RS29325 PF08479 POTRA domain, ShlB-type RIV7116_RS29350 PF00581 Rhodanese-like domain RIV7116_RS29350 PF12368 Rhodanase C-terminal RIV7116_RS29350 PF17773 UPF0176 acylphosphatase like domain RIV7116_RS29365 PF01625 Peptide methionine sulfoxide reductase RIV7116_RS29370 PF16363 GDP-mannose 4,6 dehydratase RIV7116_RS29385 PF01814 Hemerythrin HHE cation binding domain RIV7116_RS29395 PF00072 Response regulator receiver domain RIV7116_RS29395 PF00196 Bacterial regulatory proteins, luxR family RIV7116_RS29400 PF00294 pfkB family carbohydrate kinase RIV7116_RS29410 PF00805 Pentapeptide repeats (8 copies) RIV7116_RS29410 PF00069 Protein kinase domain RIV7116_RS29415 PF13302 Acetyltransferase (GNAT) domain RIV7116_RS29425 PF00305 Lipoxygenase RIV7116_RS29445 PF13180 PDZ domain RIV7116_RS29450 PF00805 Pentapeptide repeats (8 copies) RIV7116_RS29450 PF00069 Protein kinase domain RIV7116_RS29460 PF01425 Amidase RIV7116_RS29465 PF01425 Amidase RIV7116_RS29470 PF03633 Glycosyl hydrolase family 65, C-terminal domain RIV7116_RS29470 PF03636 Glycosyl hydrolase family 65, N-terminal domain RIV7116_RS29470 PF03632 Glycosyl hydrolase family 65 central catalytic domain RIV7116_RS29480 PF00155 Aminotransferase class I and II RIV7116_RS29485 PF01330 RuvA N terminal domain RIV7116_RS29485 PF07499 RuvA, C-terminal domain RIV7116_RS29490 PF05116 Sucrose-6F-phosphate phosphohydrolase RIV7116_RS29500 PF02733 Dak1 domain RIV7116_RS29505 PF02469 Fasciclin domain RIV7116_RS29510 PF06769 YoeB-like toxin of bacterial type II toxin-antitoxin system RIV7116_RS29530 PF02734 DAK2 domain RIV7116_RS29535 PF00069 Protein kinase domain RIV7116_RS29535 PF03793 PASTA domain RIV7116_RS29540 PF02896 PEP-utilising enzyme, TIM barrel domain RIV7116_RS29540 PF05524 PEP-utilising enzyme, N-terminal RIV7116_RS29540 PF00391 PEP-utilising enzyme, mobile domain RIV7116_RS29550 PF02609 Exonuclease VII small subunit RIV7116_RS29555 PF02601 Exonuclease VII, large subunit RIV7116_RS29555 PF13742 OB-fold nucleic acid binding domain RIV7116_RS29570 PF03781 Sulfatase-modifying factor enzyme 1 RIV7116_RS29575 PF03781 Sulfatase-modifying factor enzyme 1 RIV7116_RS29575 PF00069 Protein kinase domain RIV7116_RS29585 PF15975 Flotillin RIV7116_RS29585 PF01145 SPFH domain / Band 7 family RIV7116_RS29590 PF01138 3' exoribonuclease family, domain 1 RIV7116_RS29590 PF03725 3' exoribonuclease family, domain 2 RIV7116_RS29595 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase RIV7116_RS29600 PF00498 FHA domain RIV7116_RS29600 PF12773 Double zinc ribbon RIV7116_RS29620 PF08241 Methyltransferase domain RIV7116_RS29630 PF03040 CemA family RIV7116_RS29640 PF03466 LysR substrate binding domain RIV7116_RS29640 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RIV7116_RS29645 PF00999 Sodium/hydrogen exchanger family RIV7116_RS29650 PF13533 Biotin-lipoyl like RIV7116_RS29660 PF00873 AcrB/AcrD/AcrF family RIV7116_RS29675 PF00005 ABC transporter RIV7116_RS29690 PF02943 Ferredoxin thioredoxin reductase catalytic beta chain RIV7116_RS29705 PF02492 CobW/HypB/UreG, nucleotide-binding domain RIV7116_RS29710 PF01155 Hydrogenase/urease nickel incorporation, metallochaperone, hypA RIV7116_RS29720 PF02769 AIR synthase related protein, C-terminal domain RIV7116_RS29720 PF00586 AIR synthase related protein, N-terminal domain RIV7116_RS29730 PF01924 Hydrogenase formation hypA family RIV7116_RS29735 PF01455 HupF/HypC family RIV7116_RS29740 PF17788 HypF Kae1-like domain RIV7116_RS29740 PF00708 Acylphosphatase RIV7116_RS29740 PF07503 HypF finger RIV7116_RS29740 PF01300 Telomere recombination RIV7116_RS29750 PF01106 NifU-like domain RIV7116_RS29780 PF00672 HAMP domain RIV7116_RS29780 PF00211 Adenylate and Guanylate cyclase catalytic domain RIV7116_RS29795 PF01618 MotA/TolQ/ExbB proton channel family RIV7116_RS29800 PF02472 Biopolymer transport protein ExbD/TolR RIV7116_RS29805 PF14525 AraC-binding-like domain RIV7116_RS29805 PF12833 Helix-turn-helix domain RIV7116_RS29810 PF07715 TonB-dependent Receptor Plug Domain RIV7116_RS29810 PF00593 TonB dependent receptor RIV7116_RS29815 PF01497 Periplasmic binding protein RIV7116_RS29825 PF00975 Thioesterase domain RIV7116_RS29830 PF00248 Aldo/keto reductase family RIV7116_RS29835 PF00501 AMP-binding enzyme RIV7116_RS29835 PF13193 AMP-binding enzyme C-terminal domain RIV7116_RS29835 PF00668 Condensation domain RIV7116_RS29835 PF00550 Phosphopantetheine attachment site RIV7116_RS29840 PF02668 Taurine catabolism dioxygenase TauD, TfdA family RIV7116_RS29845 PF00550 Phosphopantetheine attachment site RIV7116_RS29845 PF00668 Condensation domain RIV7116_RS29845 PF13193 AMP-binding enzyme C-terminal domain RIV7116_RS29845 PF00501 AMP-binding enzyme RIV7116_RS29850 PF00668 Condensation domain RIV7116_RS29850 PF00550 Phosphopantetheine attachment site RIV7116_RS29850 PF00501 AMP-binding enzyme RIV7116_RS29850 PF13193 AMP-binding enzyme C-terminal domain RIV7116_RS29855 PF00975 Thioesterase domain RIV7116_RS29855 PF00550 Phosphopantetheine attachment site RIV7116_RS29855 PF00668 Condensation domain RIV7116_RS29855 PF13193 AMP-binding enzyme C-terminal domain RIV7116_RS29855 PF00501 AMP-binding enzyme RIV7116_RS29860 PF14765 Polyketide synthase dehydratase RIV7116_RS29860 PF00550 Phosphopantetheine attachment site RIV7116_RS29860 PF08659 KR domain RIV7116_RS29860 PF00698 Acyl transferase domain RIV7116_RS29860 PF08240 Alcohol dehydrogenase GroES-like domain RIV7116_RS29860 PF16197 Ketoacyl-synthetase C-terminal extension RIV7116_RS29860 PF02801 Beta-ketoacyl synthase, C-terminal domain RIV7116_RS29860 PF00109 Beta-ketoacyl synthase, N-terminal domain RIV7116_RS29865 PF16197 Ketoacyl-synthetase C-terminal extension RIV7116_RS29865 PF00109 Beta-ketoacyl synthase, N-terminal domain RIV7116_RS29865 PF00698 Acyl transferase domain RIV7116_RS29865 PF00550 Phosphopantetheine attachment site RIV7116_RS29865 PF08659 KR domain RIV7116_RS29865 PF02801 Beta-ketoacyl synthase, C-terminal domain RIV7116_RS29870 PF00698 Acyl transferase domain RIV7116_RS29870 PF08240 Alcohol dehydrogenase GroES-like domain RIV7116_RS29870 PF16197 Ketoacyl-synthetase C-terminal extension RIV7116_RS29870 PF00109 Beta-ketoacyl synthase, N-terminal domain RIV7116_RS29870 PF02801 Beta-ketoacyl synthase, C-terminal domain RIV7116_RS29870 PF08659 KR domain RIV7116_RS29870 PF00550 Phosphopantetheine attachment site RIV7116_RS29870 PF14765 Polyketide synthase dehydratase RIV7116_RS29875 PF00501 AMP-binding enzyme RIV7116_RS29880 PF14525 AraC-binding-like domain RIV7116_RS29880 PF12833 Helix-turn-helix domain RIV7116_RS29885 PF00593 TonB dependent receptor RIV7116_RS29885 PF07715 TonB-dependent Receptor Plug Domain RIV7116_RS29895 PF07690 Major Facilitator Superfamily RIV7116_RS29910 PF01497 Periplasmic binding protein RIV7116_RS29915 PF07690 Major Facilitator Superfamily RIV7116_RS29920 PF01497 Periplasmic binding protein RIV7116_RS29925 PF00593 TonB dependent receptor RIV7116_RS29925 PF07715 TonB-dependent Receptor Plug Domain RIV7116_RS29930 PF12833 Helix-turn-helix domain RIV7116_RS29935 PF00005 ABC transporter RIV7116_RS29935 PF08402 TOBE domain RIV7116_RS29940 PF03649 Uncharacterised protein family (UPF0014) RIV7116_RS29945 PF07690 Major Facilitator Superfamily RIV7116_RS29950 PF02659 Putative manganese efflux pump RIV7116_RS29955 PF01032 FecCD transport family RIV7116_RS29960 PF01032 FecCD transport family RIV7116_RS29965 PF00005 ABC transporter RIV7116_RS29980 PF14720 NiFe/NiFeSe hydrogenase small subunit C-terminal RIV7116_RS29980 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit RIV7116_RS29985 PF00589 Phage integrase family RIV7116_RS29995 PF00374 Nickel-dependent hydrogenase RIV7116_RS30005 PF00534 Glycosyl transferases group 1 RIV7116_RS30005 PF00862 Sucrose synthase RIV7116_RS30030 PF03848 Tellurite resistance protein TehB RIV7116_RS30035 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RIV7116_RS30035 PF03459 TOBE domain RIV7116_RS30040 PF00111 2Fe-2S iron-sulfur cluster binding domain RIV7116_RS30045 PF01521 Iron-sulphur cluster biosynthesis RIV7116_RS30050 PF00899 ThiF family RIV7116_RS30055 PF03206 Nitrogen fixation protein NifW RIV7116_RS30060 PF05082 Rop-like RIV7116_RS30065 PF03270 Protein of unknown function, DUF269 RIV7116_RS30070 PF02579 Dinitrogenase iron-molybdenum cofactor RIV7116_RS30075 PF00148 Nitrogenase component 1 type Oxidoreductase RIV7116_RS30080 PF00148 Nitrogenase component 1 type Oxidoreductase RIV7116_RS30085 PF11844 Domain of unknown function (DUF3364) RIV7116_RS30085 PF00148 Nitrogenase component 1 type Oxidoreductase RIV7116_RS30185 PF08479 POTRA domain, ShlB-type RIV7116_RS30185 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB RIV7116_RS30185 PF17287 POTRA domain RIV7116_RS30215 PF00124 Photosynthetic reaction centre protein RIV7116_RS30220 PF00005 ABC transporter RIV7116_RS30235 PF02653 Branched-chain amino acid transport system / permease component RIV7116_RS30240 PF02653 Branched-chain amino acid transport system / permease component RIV7116_RS30260 PF00211 Adenylate and Guanylate cyclase catalytic domain RIV7116_RS30260 PF00072 Response regulator receiver domain RIV7116_RS30265 PF07690 Major Facilitator Superfamily RIV7116_RS30275 PF12795 Mechanosensitive ion channel porin domain RIV7116_RS30275 PF12794 Mechanosensitive ion channel inner membrane domain 1 RIV7116_RS30275 PF00924 Mechanosensitive ion channel RIV7116_RS30285 PF00664 ABC transporter transmembrane region RIV7116_RS30285 PF03412 Peptidase C39 family RIV7116_RS30285 PF00005 ABC transporter RIV7116_RS30355 PF03412 Peptidase C39 family RIV7116_RS30355 PF00005 ABC transporter RIV7116_RS30355 PF00664 ABC transporter transmembrane region RIV7116_RS30370 PF03099 Biotin/lipoate A/B protein ligase family RIV7116_RS30370 PF12706 Beta-lactamase superfamily domain RIV7116_RS30385 PF00148 Nitrogenase component 1 type Oxidoreductase RIV7116_RS30385 PF11844 Domain of unknown function (DUF3364) RIV7116_RS30405 PF01738 Dienelactone hydrolase family RIV7116_RS30415 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain RIV7116_RS30415 PF02777 Iron/manganese superoxide dismutases, C-terminal domain RIV7116_RS30425 PF01872 RibD C-terminal domain RIV7116_RS30460 PF03144 Elongation factor Tu domain 2 RIV7116_RS30460 PF03764 Elongation factor G, domain IV RIV7116_RS30460 PF14492 Elongation Factor G, domain II RIV7116_RS30460 PF00009 Elongation factor Tu GTP binding domain RIV7116_RS30460 PF00679 Elongation factor G C-terminus RIV7116_RS30485 PF00501 AMP-binding enzyme RIV7116_RS30485 PF13193 AMP-binding enzyme C-terminal domain RIV7116_RS30495 PF04030 D-arabinono-1,4-lactone oxidase RIV7116_RS30495 PF01565 FAD binding domain RIV7116_RS30505 PF00148 Nitrogenase component 1 type Oxidoreductase RIV7116_RS30515 PF00535 Glycosyl transferase family 2 RIV7116_RS30520 PF00239 Resolvase, N terminal domain RIV7116_RS30520 PF02796 Helix-turn-helix domain of resolvase RIV7116_RS30535 PF00148 Nitrogenase component 1 type Oxidoreductase RIV7116_RS30540 PF00589 Phage integrase family RIV7116_RS30545 PF00148 Nitrogenase component 1 type Oxidoreductase RIV7116_RS30590 PF00667 FAD binding domain RIV7116_RS30590 PF00258 Flavodoxin RIV7116_RS30590 PF00175 Oxidoreductase NAD-binding domain RIV7116_RS30600 PF00400 WD domain, G-beta repeat RIV7116_RS30620 PF00082 Subtilase family RIV7116_RS30640 PF02624 YcaO cyclodehydratase, ATP-ad Mg2+-binding RIV7116_RS30640 PF18381 YcaO cyclodehydratase C-terminal domain RIV7116_RS30660 PF06280 Fn3-like domain RIV7116_RS30660 PF02225 PA domain RIV7116_RS30660 PF00082 Subtilase family RIV7116_RS30690 PF04055 Radical SAM superfamily RIV7116_RS30690 PF13186 Iron-sulfur cluster-binding domain RIV7116_RS30700 PF03070 TENA/THI-4/PQQC family RIV7116_RS30705 PF12706 Beta-lactamase superfamily domain RIV7116_RS30715 PF07995 Glucose / Sorbosone dehydrogenase RIV7116_RS30745 PF02796 Helix-turn-helix domain of resolvase RIV7116_RS30745 PF00239 Resolvase, N terminal domain RIV7116_RS30750 PF00142 4Fe-4S iron sulfur cluster binding proteins, NifH/frxC family RIV7116_RS30755 PF04324 BFD-like [2Fe-2S] binding domain RIV7116_RS30755 PF01592 NifU-like N terminal domain RIV7116_RS30755 PF01106 NifU-like domain RIV7116_RS30760 PF00266 Aminotransferase class-V RIV7116_RS30765 PF00037 4Fe-4S binding domain RIV7116_RS30770 PF02579 Dinitrogenase iron-molybdenum cofactor RIV7116_RS30770 PF04055 Radical SAM superfamily RIV7116_RS30780 PF04055 Radical SAM superfamily RIV7116_RS30780 PF02579 Dinitrogenase iron-molybdenum cofactor RIV7116_RS30785 PF00589 Phage integrase family RIV7116_RS30795 PF08240 Alcohol dehydrogenase GroES-like domain RIV7116_RS30795 PF00107 Zinc-binding dehydrogenase RIV7116_RS30800 PF04055 Radical SAM superfamily RIV7116_RS30800 PF06968 Biotin and Thiamin Synthesis associated domain RIV7116_RS30800 PF00202 Aminotransferase class-III RIV7116_RS30805 PF00132 Bacterial transferase hexapeptide (six repeats) RIV7116_RS30805 PF06426 Serine acetyltransferase, N-terminal RIV7116_RS30820 PF00682 HMGL-like RIV7116_RS30825 PF04319 NifZ domain RIV7116_RS30830 PF06988 NifT/FixU protein RIV7116_RS30845 PF00593 TonB dependent receptor RIV7116_RS30845 PF07715 TonB-dependent Receptor Plug Domain RIV7116_RS30865 PF07728 AAA domain (dynein-related subfamily) RIV7116_RS30890 PF17657 Bacterial DNA polymerase III alpha subunit finger domain RIV7116_RS30890 PF02811 PHP domain RIV7116_RS30890 PF01336 OB-fold nucleic acid binding domain RIV7116_RS30890 PF07733 Bacterial DNA polymerase III alpha NTPase domain RIV7116_RS30890 PF14579 Helix-hairpin-helix motif RIV7116_RS30900 PF01425 Amidase RIV7116_RS30915 PF01472 PUA domain RIV7116_RS30915 PF00696 Amino acid kinase family RIV7116_RS30935 PF13409 Glutathione S-transferase, N-terminal domain RIV7116_RS30945 PF00528 Binding-protein-dependent transport system inner membrane component RIV7116_RS30950 PF00528 Binding-protein-dependent transport system inner membrane component RIV7116_RS30960 PF14495 Cytochrome c-550 domain RIV7116_RS30965 PF14495 Cytochrome c-550 domain RIV7116_RS30970 PF00127 Copper binding proteins, plastocyanin/azurin family RIV7116_RS30990 PF00999 Sodium/hydrogen exchanger family RIV7116_RS30990 PF03471 Transporter associated domain RIV7116_RS31005 PF00672 HAMP domain RIV7116_RS31005 PF00989 PAS fold RIV7116_RS31005 PF00512 His Kinase A (phospho-acceptor) domain RIV7116_RS31005 PF18698 Histidine kinase sensor domain RIV7116_RS31005 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RIV7116_RS31030 PF00542 Ribosomal protein L7/L12 C-terminal domain RIV7116_RS31030 PF16320 Ribosomal protein L7/L12 dimerisation domain RIV7116_RS31075 PF01209 ubiE/COQ5 methyltransferase family RIV7116_RS31110 PF02091 Glycyl-tRNA synthetase alpha subunit RIV7116_RS31130 PF09587 Bacterial capsule synthesis protein PGA_cap RIV7116_RS31135 PF02540 NAD synthase RIV7116_RS31140 PF00072 Response regulator receiver domain RIV7116_RS31140 PF00512 His Kinase A (phospho-acceptor) domain RIV7116_RS31140 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) RIV7116_RS31140 PF01627 Hpt domain RIV7116_RS31140 PF00672 HAMP domain RIV7116_RS31140 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RIV7116_RS31150 PF04055 Radical SAM superfamily RIV7116_RS31155 PF00072 Response regulator receiver domain RIV7116_RS31155 PF00486 Transcriptional regulatory protein, C terminal RIV7116_RS31160 PF00069 Protein kinase domain RIV7116_RS31160 PF03793 PASTA domain RIV7116_RS31185 PF00361 Proton-conducting membrane transporter RIV7116_RS31195 PF01906 Putative heavy-metal-binding RIV7116_RS31205 PF00795 Carbon-nitrogen hydrolase RIV7116_RS31205 PF02540 NAD synthase RIV7116_RS31215 PF01467 Cytidylyltransferase-like RIV7116_RS31220 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain RIV7116_RS31220 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family RIV7116_RS31245 PF01809 Putative membrane protein insertion efficiency factor RIV7116_RS31250 PF01427 D-ala-D-ala dipeptidase RIV7116_RS31255 PF00248 Aldo/keto reductase family RIV7116_RS31265 PF00528 Binding-protein-dependent transport system inner membrane component RIV7116_RS31280 PF00551 Formyl transferase RIV7116_RS31285 PF08207 Elongation factor P (EF-P) KOW-like domain RIV7116_RS31285 PF01132 Elongation factor P (EF-P) OB domain RIV7116_RS31285 PF09285 Elongation factor P, C-terminal RIV7116_RS31290 PF00364 Biotin-requiring enzyme RIV7116_RS31295 PF01022 Bacterial regulatory protein, arsR family RIV7116_RS31310 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) RIV7116_RS31310 PF03129 Anticodon binding domain RIV7116_RS31310 PF04073 Aminoacyl-tRNA editing domain RIV7116_RS31330 PF00462 Glutaredoxin RIV7116_RS31340 PF01494 FAD binding domain RIV7116_RS31345 PF00005 ABC transporter RIV7116_RS31385 PF07728 AAA domain (dynein-related subfamily) RIV7116_RS31400 PF18698 Histidine kinase sensor domain RIV7116_RS31400 PF00512 His Kinase A (phospho-acceptor) domain RIV7116_RS31400 PF00989 PAS fold RIV7116_RS31400 PF00672 HAMP domain RIV7116_RS31400 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RIV7116_RS31405 PF07992 Pyridine nucleotide-disulphide oxidoreductase RIV7116_RS31410 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily RIV7116_RS31415 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain RIV7116_RS31415 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase RIV7116_RS31420 PF00941 FAD binding domain in molybdopterin dehydrogenase RIV7116_RS31420 PF03450 CO dehydrogenase flavoprotein C-terminal domain RIV7116_RS31425 PF10518 TAT (twin-arginine translocation) pathway signal sequence RIV7116_RS31425 PF00111 2Fe-2S iron-sulfur cluster binding domain RIV7116_RS31425 PF01799 [2Fe-2S] binding domain RIV7116_RS31430 PF01554 MatE RIV7116_RS31435 PF05762 VWA domain containing CoxE-like protein RIV7116_RS31455 PF04239 Protein of unknown function (DUF421) RIV7116_RS31465 PF08719 Domain of unknown function (DUF1768) RIV7116_RS31480 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily RIV7116_RS31505 PF01850 PIN domain RIV7116_RS31535 PF03960 ArsC family RIV7116_RS31555 PF00510 Cytochrome c oxidase subunit III RIV7116_RS31560 PF00115 Cytochrome C and Quinol oxidase polypeptide I RIV7116_RS31565 PF02790 Cytochrome C oxidase subunit II, transmembrane domain RIV7116_RS31565 PF00116 Cytochrome C oxidase subunit II, periplasmic domain RIV7116_RS31580 PF03372 Endonuclease/Exonuclease/phosphatase family RIV7116_RS31600 PF00291 Pyridoxal-phosphate dependent enzyme RIV7116_RS31630 PF14883 Hypothetical glycosyl hydrolase family 13 RIV7116_RS31630 PF01522 Polysaccharide deacetylase RIV7116_RS31635 PF17912 MalK OB fold domain RIV7116_RS31635 PF00005 ABC transporter RIV7116_RS31635 PF03459 TOBE domain RIV7116_RS31640 PF16416 ARM-like repeat domain, GUN4-N terminal RIV7116_RS31640 PF05419 GUN4-like RIV7116_RS31645 PF00180 Isocitrate/isopropylmalate dehydrogenase RIV7116_RS31665 PF01047 MarR family RIV7116_RS31675 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase RIV7116_RS31675 PF14572 Phosphoribosyl synthetase-associated domain RIV7116_RS31680 PF00069 Protein kinase domain RIV7116_RS31680 PF00805 Pentapeptide repeats (8 copies) RIV7116_RS31690 PF01546 Peptidase family M20/M25/M40 RIV7116_RS31690 PF07687 Peptidase dimerisation domain RIV7116_RS31695 PF00043 Glutathione S-transferase, C-terminal domain RIV7116_RS31695 PF02798 Glutathione S-transferase, N-terminal domain RIV7116_RS31715 PF02769 AIR synthase related protein, C-terminal domain RIV7116_RS31715 PF00586 AIR synthase related protein, N-terminal domain RIV7116_RS31735 PF05552 Conserved TM helix RIV7116_RS31735 PF00924 Mechanosensitive ion channel RIV7116_RS31760 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component RIV7116_RS31775 PF00089 Trypsin RIV7116_RS31785 PF01381 Helix-turn-helix RIV7116_RS31795 PF00472 RF-1 domain RIV7116_RS31810 PF05726 Pirin C-terminal cupin domain RIV7116_RS31810 PF02678 Pirin RIV7116_RS31815 PF13302 Acetyltransferase (GNAT) domain RIV7116_RS31870 PF13462 Thioredoxin RIV7116_RS31870 PF06965 Na+/H+ antiporter 1 RIV7116_RS31875 PF03480 Bacterial extracellular solute-binding protein, family 7 RIV7116_RS31900 PF06314 Acetoacetate decarboxylase (ADC) RIV7116_RS31940 PF13188 PAS domain RIV7116_RS31940 PF00512 His Kinase A (phospho-acceptor) domain RIV7116_RS31940 PF00072 Response regulator receiver domain RIV7116_RS31940 PF08448 PAS fold RIV7116_RS31940 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RIV7116_RS31945 PF00512 His Kinase A (phospho-acceptor) domain RIV7116_RS31945 PF00989 PAS fold RIV7116_RS31945 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RIV7116_RS31945 PF00672 HAMP domain RIV7116_RS31950 PF00486 Transcriptional regulatory protein, C terminal RIV7116_RS31950 PF00072 Response regulator receiver domain RIV7116_RS31955 PF01266 FAD dependent oxidoreductase RIV7116_RS31970 PF06071 Protein of unknown function (DUF933) RIV7116_RS31970 PF01926 50S ribosome-binding GTPase RIV7116_RS31975 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain RIV7116_RS31975 PF01276 Orn/Lys/Arg decarboxylase, major domain RIV7116_RS31985 PF02685 Glucokinase RIV7116_RS31990 PF00300 Histidine phosphatase superfamily (branch 1) RIV7116_RS31995 PF01804 Penicillin amidase RIV7116_RS32000 PF04966 Carbohydrate-selective porin, OprB family RIV7116_RS32000 PF00395 S-layer homology domain RIV7116_RS32045 PF00440 Bacterial regulatory proteins, tetR family RIV7116_RS32045 PF08359 YsiA-like protein, C-terminal region RIV7116_RS32050 PF00067 Cytochrome P450 RIV7116_RS32060 PF00672 HAMP domain RIV7116_RS32060 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RIV7116_RS32060 PF00512 His Kinase A (phospho-acceptor) domain RIV7116_RS32085 PF03091 CutA1 divalent ion tolerance protein RIV7116_RS32105 PF00201 UDP-glucoronosyl and UDP-glucosyl transferase RIV7116_RS32105 PF03033 Glycosyltransferase family 28 N-terminal domain RIV7116_RS32110 PF10726 Protein of function (DUF2518) RIV7116_RS32120 PF00465 Iron-containing alcohol dehydrogenase RIV7116_RS32125 PF00155 Aminotransferase class I and II RIV7116_RS32130 PF01022 Bacterial regulatory protein, arsR family RIV7116_RS32135 PF00230 Major intrinsic protein RIV7116_RS32140 PF03358 NADPH-dependent FMN reductase RIV7116_RS32145 PF01451 Low molecular weight phosphotyrosine protein phosphatase RIV7116_RS32195 PF00875 DNA photolyase RIV7116_RS32195 PF03441 FAD binding domain of DNA photolyase RIV7116_RS32220 PF04294 VanW like protein RIV7116_RS32235 PF00440 Bacterial regulatory proteins, tetR family RIV7116_RS32250 PF08448 PAS fold RIV7116_RS32250 PF13188 PAS domain RIV7116_RS32250 PF00072 Response regulator receiver domain RIV7116_RS32250 PF00512 His Kinase A (phospho-acceptor) domain RIV7116_RS32250 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RIV7116_RS32255 PF00072 Response regulator receiver domain RIV7116_RS32255 PF01339 CheB methylesterase RIV7116_RS32260 PF08448 PAS fold RIV7116_RS32260 PF03705 CheR methyltransferase, all-alpha domain RIV7116_RS32260 PF01739 CheR methyltransferase, SAM binding domain RIV7116_RS32260 PF01339 CheB methylesterase RIV7116_RS32265 PF07478 D-ala D-ala ligase C-terminus RIV7116_RS32265 PF01820 D-ala D-ala ligase N-terminus RIV7116_RS32270 PF03023 Lipid II flippase MurJ RIV7116_RS32275 PF00535 Glycosyl transferase family 2 RIV7116_RS32290 PF00535 Glycosyl transferase family 2 RIV7116_RS32290 PF01501 Glycosyl transferase family 8 RIV7116_RS32300 PF01061 ABC-2 type transporter RIV7116_RS32305 PF14524 Wzt C-terminal domain RIV7116_RS32305 PF00005 ABC transporter RIV7116_RS32310 PF01740 STAS domain RIV7116_RS32310 PF00916 Sulfate permease family RIV7116_RS32315 PF00582 Universal stress protein family RIV7116_RS32320 PF00916 Sulfate permease family RIV7116_RS32320 PF01740 STAS domain RIV7116_RS32325 PF00916 Sulfate permease family RIV7116_RS32325 PF01740 STAS domain RIV7116_RS32360 PF13439 Glycosyltransferase Family 4 RIV7116_RS32360 PF00534 Glycosyl transferases group 1 RIV7116_RS32370 PF01523 Putative modulator of DNA gyrase RIV7116_RS32375 PF01121 Dephospho-CoA kinase RIV7116_RS32380 PF02602 Uroporphyrinogen-III synthase HemD RIV7116_RS32385 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases RIV7116_RS32395 PF01040 UbiA prenyltransferase family RIV7116_RS32400 PF08241 Methyltransferase domain RIV7116_RS32405 PF02386 Cation transport protein RIV7116_RS32410 PF02080 TrkA-C domain RIV7116_RS32410 PF02254 TrkA-N domain RIV7116_RS32415 PF02570 Precorrin-8X methylmutase RIV7116_RS32430 PF00654 Voltage gated chloride channel RIV7116_RS32435 PF01523 Putative modulator of DNA gyrase RIV7116_RS32455 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family RIV7116_RS32460 PF03649 Uncharacterised protein family (UPF0014) RIV7116_RS32465 PF01327 Polypeptide deformylase RIV7116_RS32490 PF02492 CobW/HypB/UreG, nucleotide-binding domain RIV7116_RS32490 PF07683 Cobalamin synthesis protein cobW C-terminal domain RIV7116_RS32500 PF02657 Fe-S metabolism associated domain RIV7116_RS32510 PF01113 Dihydrodipicolinate reductase, N-terminus RIV7116_RS32510 PF05173 Dihydrodipicolinate reductase, C-terminus RIV7116_RS32535 PF13180 PDZ domain RIV7116_RS32540 PF02583 Metal-sensitive transcriptional repressor RIV7116_RS32545 PF12697 Alpha/beta hydrolase family RIV7116_RS32555 PF13460 NAD(P)H-binding RIV7116_RS32580 PF12849 PBP superfamily domain RIV7116_RS32585 PF01077 Nitrite and sulphite reductase 4Fe-4S domain RIV7116_RS32585 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases RIV7116_RS32590 PF00485 Phosphoribulokinase / Uridine kinase family RIV7116_RS32595 PF04002 RadC-like JAB domain RIV7116_RS32600 PF02397 Bacterial sugar transferase RIV7116_RS32605 PF00331 Glycosyl hydrolase family 10 RIV7116_RS32605 PF02018 Carbohydrate binding domain RIV7116_RS32605 PF06452 Carbohydrate family 9 binding domain-like RIV7116_RS32610 PF03808 Glycosyl transferase WecB/TagA/CpsF family RIV7116_RS32615 PF00534 Glycosyl transferases group 1 RIV7116_RS32615 PF13439 Glycosyltransferase Family 4 RIV7116_RS32620 PF00501 AMP-binding enzyme RIV7116_RS32620 PF13193 AMP-binding enzyme C-terminal domain RIV7116_RS32620 PF00668 Condensation domain RIV7116_RS32620 PF00550 Phosphopantetheine attachment site RIV7116_RS32630 PF00534 Glycosyl transferases group 1 RIV7116_RS32630 PF13439 Glycosyltransferase Family 4 RIV7116_RS32635 PF00535 Glycosyl transferase family 2 RIV7116_RS32645 PF13614 AAA domain RIV7116_RS32645 PF13807 G-rich domain on putative tyrosine kinase RIV7116_RS32645 PF02706 Chain length determinant protein RIV7116_RS32660 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain RIV7116_RS32660 PF02222 ATP-grasp domain RIV7116_RS32665 PF00675 Insulinase (Peptidase family M16) RIV7116_RS32665 PF05193 Peptidase M16 inactive domain RIV7116_RS32675 PF01510 N-acetylmuramoyl-L-alanine amidase RIV7116_RS32675 PF01471 Putative peptidoglycan binding domain RIV7116_RS32695 PF01513 ATP-NAD kinase RIV7116_RS32700 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L RIV7116_RS32705 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 RIV7116_RS32710 PF13237 4Fe-4S dicluster domain RIV7116_RS32715 PF00146 NADH dehydrogenase RIV7116_RS32720 PF00285 Citrate synthase, C-terminal domain RIV7116_RS32725 PF00300 Histidine phosphatase superfamily (branch 1) RIV7116_RS32740 PF00842 Alanine racemase, C-terminal domain RIV7116_RS32740 PF01168 Alanine racemase, N-terminal domain RIV7116_RS32750 PF14332 Domain of unknown function (DUF4388) RIV7116_RS32750 PF00072 Response regulator receiver domain RIV7116_RS32755 PF00072 Response regulator receiver domain RIV7116_RS32755 PF00486 Transcriptional regulatory protein, C terminal RIV7116_RS32765 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain RIV7116_RS32765 PF01590 GAF domain RIV7116_RS32770 PF01627 Hpt domain RIV7116_RS32770 PF00072 Response regulator receiver domain RIV7116_RS32770 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RIV7116_RS32770 PF02895 Signal transducing histidine kinase, homodimeric domain RIV7116_RS32770 PF01584 CheW-like domain RIV7116_RS32775 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain RIV7116_RS32775 PF01590 GAF domain RIV7116_RS32785 PF00005 ABC transporter RIV7116_RS32785 PF17850 CysA C-terminal regulatory domain RIV7116_RS32785 PF12857 TOBE-like domain RIV7116_RS32825 PF01329 Pterin 4 alpha carbinolamine dehydratase RIV7116_RS32835 PF13302 Acetyltransferase (GNAT) domain RIV7116_RS32870 PF00580 UvrD/REP helicase N-terminal domain RIV7116_RS32870 PF12705 PD-(D/E)XK nuclease superfamily RIV7116_RS32870 PF13361 UvrD-like helicase C-terminal domain RIV7116_RS32890 PF00004 ATPase family associated with various cellular activities (AAA) RIV7116_RS32890 PF07724 AAA domain (Cdc48 subfamily) RIV7116_RS32890 PF17871 AAA lid domain RIV7116_RS32890 PF02861 Clp amino terminal domain, pathogenicity island component RIV7116_RS32890 PF10431 C-terminal, D2-small domain, of ClpB protein RIV7116_RS32900 PF12323 Helix-turn-helix domain RIV7116_RS32900 PF01385 Probable transposase RIV7116_RS32900 PF07282 Putative transposase DNA-binding domain RIV7116_RS32905 PF05969 Photosystem II complex subunit Ycf12 RIV7116_RS32910 PF10141 Single-strand DNA-specific exonuclease, C terminal domain RIV7116_RS32910 PF17768 RecJ OB domain RIV7116_RS32910 PF02272 DHHA1 domain RIV7116_RS32910 PF01368 DHH family RIV7116_RS32920 PF00733 Asparagine synthase RIV7116_RS32920 PF13537 Glutamine amidotransferase domain RIV7116_RS32940 PF01522 Polysaccharide deacetylase RIV7116_RS32995 PF03562 MltA specific insert domain RIV7116_RS32995 PF06725 3D domain RIV7116_RS33000 PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP RIV7116_RS33010 PF17310 Family of unknown function (DUF5357) RIV7116_RS33025 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) RIV7116_RS33030 PF00395 S-layer homology domain RIV7116_RS33050 PF13292 1-deoxy-D-xylulose-5-phosphate synthase RIV7116_RS33050 PF02780 Transketolase, C-terminal domain RIV7116_RS33050 PF02779 Transketolase, pyrimidine binding domain RIV7116_RS33055 PF01008 Initiation factor 2 subunit family RIV7116_RS33065 PF02661 Fic/DOC family RIV7116_RS33075 PF03453 MoeA N-terminal region (domain I and II) RIV7116_RS33075 PF00994 Probable molybdopterin binding domain RIV7116_RS33075 PF03454 MoeA C-terminal region (domain IV) RIV7116_RS33090 PF07992 Pyridine nucleotide-disulphide oxidoreductase RIV7116_RS33100 PF00400 WD domain, G-beta repeat RIV7116_RS33105 PF13091 PLD-like domain RIV7116_RS33150 PF07697 7TM-HD extracellular RIV7116_RS33150 PF07698 7TM receptor with intracellular HD hydrolase RIV7116_RS33150 PF01966 HD domain RIV7116_RS33160 PF01220 Dehydroquinase class II RIV7116_RS33170 PF01751 Toprim domain RIV7116_RS33170 PF13368 Topoisomerase C-terminal repeat RIV7116_RS33170 PF01131 DNA topoisomerase RIV7116_RS33180 PF00076 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) RIV7116_RS33200 PF01458 Uncharacterized protein family (UPF0051) RIV7116_RS33205 PF00005 ABC transporter RIV7116_RS33210 PF01458 Uncharacterized protein family (UPF0051) RIV7116_RS33215 PF00266 Aminotransferase class-V RIV7116_RS33240 PF00403 Heavy-metal-associated domain RIV7116_RS33245 PF00563 EAL domain RIV7116_RS33245 PF00498 FHA domain RIV7116_RS33245 PF00990 Diguanylate cyclase, GGDEF domain RIV7116_RS33255 PF01370 NAD dependent epimerase/dehydratase family RIV7116_RS33255 PF08338 Domain of unknown function (DUF1731) RIV7116_RS33270 PF01521 Iron-sulphur cluster biosynthesis RIV7116_RS33290 PF01593 Flavin containing amine oxidoreductase RIV7116_RS33305 PF07685 CobB/CobQ-like glutamine amidotransferase domain RIV7116_RS33305 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain RIV7116_RS33325 PF01943 Polysaccharide biosynthesis protein RIV7116_RS33330 PF17103 Stealth protein CR4, conserved region 4 RIV7116_RS33330 PF17102 Stealth protein CR3, conserved region 3 RIV7116_RS33330 PF11380 Stealth protein CR2, conserved region 2 RIV7116_RS33330 PF17101 Stealth protein CR1, conserved region 1 RIV7116_RS33330 PF00534 Glycosyl transferases group 1 RIV7116_RS33335 PF00535 Glycosyl transferase family 2 RIV7116_RS33340 PF01593 Flavin containing amine oxidoreductase RIV7116_RS33345 PF00534 Glycosyl transferases group 1 RIV7116_RS33345 PF00535 Glycosyl transferase family 2 RIV7116_RS33350 PF00578 AhpC/TSA family RIV7116_RS33365 PF00005 ABC transporter RIV7116_RS33375 PF01327 Polypeptide deformylase RIV7116_RS33380 PF13180 PDZ domain RIV7116_RS33410 PF00712 DNA polymerase III beta subunit, N-terminal domain RIV7116_RS33410 PF02767 DNA polymerase III beta subunit, central domain RIV7116_RS33410 PF02768 DNA polymerase III beta subunit, C-terminal domain RIV7116_RS33460 PF16124 RecQ zinc-binding RIV7116_RS33460 PF00570 HRDC domain RIV7116_RS33460 PF00270 DEAD/DEAH box helicase RIV7116_RS33460 PF00271 Helicase conserved C-terminal domain RIV7116_RS33460 PF09382 RQC domain RIV7116_RS33485 PF00773 RNB domain RIV7116_RS33545 PF00563 EAL domain RIV7116_RS33545 PF01590 GAF domain RIV7116_RS33545 PF00360 Phytochrome region RIV7116_RS33545 PF00990 Diguanylate cyclase, GGDEF domain RIV7116_RS33590 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RIV7116_RS33590 PF00512 His Kinase A (phospho-acceptor) domain RIV7116_RS33660 PF00512 His Kinase A (phospho-acceptor) domain RIV7116_RS33660 PF00672 HAMP domain RIV7116_RS33660 PF13426 PAS domain RIV7116_RS33660 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RIV7116_RS33675 PF01202 Shikimate kinase RIV7116_RS33680 PF00400 WD domain, G-beta repeat RIV7116_RS33680 PF00931 NB-ARC domain RIV7116_RS33685 PF00069 Protein kinase domain RIV7116_RS33735 PF09456 RcsC Alpha-Beta-Loop (ABL) RIV7116_RS33735 PF00512 His Kinase A (phospho-acceptor) domain RIV7116_RS33735 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RIV7116_RS33735 PF00072 Response regulator receiver domain RIV7116_RS33755 PF00300 Histidine phosphatase superfamily (branch 1) RIV7116_RS33760 PF00072 Response regulator receiver domain RIV7116_RS33760 PF00672 HAMP domain RIV7116_RS33760 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RIV7116_RS33760 PF00512 His Kinase A (phospho-acceptor) domain RIV7116_RS33760 PF01627 Hpt domain RIV7116_RS33760 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) RIV7116_RS33795 PF01590 GAF domain RIV7116_RS33805 PF00248 Aldo/keto reductase family RIV7116_RS33825 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RIV7116_RS33825 PF01590 GAF domain RIV7116_RS33825 PF00360 Phytochrome region RIV7116_RS33825 PF08446 PAS fold RIV7116_RS33825 PF00512 His Kinase A (phospho-acceptor) domain RIV7116_RS33830 PF08446 PAS fold RIV7116_RS33830 PF00512 His Kinase A (phospho-acceptor) domain RIV7116_RS33830 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RIV7116_RS33830 PF01590 GAF domain RIV7116_RS33830 PF00360 Phytochrome region RIV7116_RS33845 PF00563 EAL domain RIV7116_RS33845 PF03707 Bacterial signalling protein N terminal repeat RIV7116_RS33845 PF00990 Diguanylate cyclase, GGDEF domain RIV7116_RS33860 PF02333 Phytase RIV7116_RS33885 PF00486 Transcriptional regulatory protein, C terminal RIV7116_RS33885 PF01627 Hpt domain RIV7116_RS33885 PF00072 Response regulator receiver domain RIV7116_RS33950 PF01590 GAF domain RIV7116_RS33950 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RIV7116_RS33950 PF00512 His Kinase A (phospho-acceptor) domain RIV7116_RS33950 PF08446 PAS fold RIV7116_RS33950 PF00360 Phytochrome region RIV7116_RS33960 PF01520 N-acetylmuramoyl-L-alanine amidase RIV7116_RS33960 PF01471 Putative peptidoglycan binding domain RIV7116_RS33970 PF00072 Response regulator receiver domain RIV7116_RS33970 PF14332 Domain of unknown function (DUF4388) RIV7116_RS33985 PF00746 LPXTG cell wall anchor motif RIV7116_RS33985 PF17210 SdrD B-like domain RIV7116_RS33985 PF17961 Bacterial Ig domain RIV7116_RS33985 PF04650 YSIRK type signal peptide RIV7116_RS33985 PF10425 C-terminus of bacterial fibrinogen-binding adhesin RIV7116_RS34025 PF00072 Response regulator receiver domain RIV7116_RS34025 PF13188 PAS domain RIV7116_RS34025 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RIV7116_RS34025 PF00512 His Kinase A (phospho-acceptor) domain RIV7116_RS34025 PF08448 PAS fold RIV7116_RS34035 PF01627 Hpt domain RIV7116_RS34035 PF00989 PAS fold RIV7116_RS34035 PF00072 Response regulator receiver domain RIV7116_RS34035 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RIV7116_RS34035 PF00512 His Kinase A (phospho-acceptor) domain RIV7116_RS34035 PF00497 Bacterial extracellular solute-binding proteins, family 3 RIV7116_RS34055 PF00512 His Kinase A (phospho-acceptor) domain RIV7116_RS34055 PF00989 PAS fold RIV7116_RS34055 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RIV7116_RS34075 PF00400 WD domain, G-beta repeat RIV7116_RS34075 PF00931 NB-ARC domain RIV7116_RS34085 PF00400 WD domain, G-beta repeat RIV7116_RS34100 PF10425 C-terminus of bacterial fibrinogen-binding adhesin RIV7116_RS34100 PF17210 SdrD B-like domain RIV7116_RS34100 PF00746 LPXTG cell wall anchor motif RIV7116_RS34100 PF04650 YSIRK type signal peptide RIV7116_RS34100 PF17961 Bacterial Ig domain RIV7116_RS34115 PF13332 Hemagglutinin repeat RIV7116_RS34115 PF05860 haemagglutination activity domain RIV7116_RS34115 PF04829 Pre-toxin domain with VENN motif RIV7116_RS34210 PF00553 Cellulose binding domain RIV7116_RS34210 PF00041 Fibronectin type III domain RIV7116_RS34210 PF00759 Glycosyl hydrolase family 9 RIV7116_RS34210 PF00942 Cellulose binding domain RIV7116_RS34215 PF00144 Beta-lactamase RIV7116_RS34240 PF00400 WD domain, G-beta repeat RIV7116_RS34240 PF12894 Anaphase-promoting complex subunit 4 WD40 domain RIV7116_RS34270 PF01590 GAF domain RIV7116_RS34270 PF00563 EAL domain RIV7116_RS34270 PF00360 Phytochrome region RIV7116_RS34270 PF00990 Diguanylate cyclase, GGDEF domain RIV7116_RS34275 PF08448 PAS fold RIV7116_RS34275 PF03705 CheR methyltransferase, all-alpha domain RIV7116_RS34275 PF01739 CheR methyltransferase, SAM binding domain RIV7116_RS34275 PF01339 CheB methylesterase RIV7116_RS34285 PF00202 Aminotransferase class-III RIV7116_RS34290 PF09587 Bacterial capsule synthesis protein PGA_cap RIV7116_RS34310 PF13229 Right handed beta helix region RIV7116_RS34315 PF13229 Right handed beta helix region RIV7116_RS34320 PF00400 WD domain, G-beta repeat RIV7116_RS34365 PF01661 Macro domain RIV7116_RS34370 PF00963 Cohesin domain RIV7116_RS34370 PF00395 S-layer homology domain RIV7116_RS34375 PF03793 PASTA domain RIV7116_RS34375 PF00069 Protein kinase domain RIV7116_RS34385 PF08239 Bacterial SH3 domain RIV7116_RS34385 PF00069 Protein kinase domain RIV7116_RS34390 PF00069 Protein kinase domain RIV7116_RS34395 PF08447 PAS fold RIV7116_RS34395 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RIV7116_RS34395 PF08448 PAS fold