locus-tag	class	description
RIV7116_RS00005	COG0593	it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box) 5'-TTATC CA A CA A-3'. DnaA binds to ATP and to acidic phospholipids
RIV7116_RS00015	COG0592	DNA-directed DNA polymerase activity
RIV7116_RS00020	COG5001	Diguanylate cyclase
RIV7116_RS00020	COG4251	negative regulation of phosphorylation
RIV7116_RS00020	COG3706	GGDEF domain
RIV7116_RS00020	COG2203	Gaf domain
RIV7116_RS00025	COG0003	Pfam Anion-transporting ATPase
RIV7116_RS00055	COG0514	ATP-dependent DNA helicase (RecQ)
RIV7116_RS00065	COG4251	negative regulation of phosphorylation
RIV7116_RS00075	COG0119	Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate)
RIV7116_RS00080	COG0557	exoribonuclease II activity
RIV7116_RS00085	COG0238	Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit
RIV7116_RS00095	COG1217	gtp-binding protein TYPA
RIV7116_RS00105	COG1247	-acetyltransferase
RIV7116_RS00110	COG1309	transcriptional regulator
RIV7116_RS00115	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
RIV7116_RS00130	COG1262	PFAM Formylglycine-generating sulfatase enzyme
RIV7116_RS00160	COG5002	protein histidine kinase activity
RIV7116_RS00200	COG1054	Belongs to the UPF0176 family
RIV7116_RS00235	COG0323	This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a molecular matchmaker , a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex
RIV7116_RS00260	COG3956	TIGRFAM MazG family protein
RIV7116_RS00285	COG0014	Catalyzes the NADPH-dependent reduction of L-glutamate 5-phosphate into L-glutamate 5-semialdehyde and phosphate. The product spontaneously undergoes cyclization to form 1-pyrroline-5- carboxylate
RIV7116_RS00300	COG1575	Belongs to the MenA family. Type 1 subfamily
RIV7116_RS00305	COG4948	Mandelate Racemase Muconate Lactonizing
RIV7116_RS00310	COG0318	PFAM AMP-dependent synthetase and ligase
RIV7116_RS00320	COG0824	Thioesterase
RIV7116_RS00365	COG0659	secondary active sulfate transmembrane transporter activity
RIV7116_RS00380	COG2815	serine threonine protein kinase
RIV7116_RS00380	COG0515	serine threonine protein kinase
RIV7116_RS00415	COG2205	protein histidine kinase activity
RIV7116_RS00425	COG1104	cysteine desulfurase activity
RIV7116_RS00430	COG0515	serine threonine protein kinase
RIV7116_RS00430	COG2815	serine threonine protein kinase
RIV7116_RS00440	COG1511	domain protein
RIV7116_RS00440	COG3264	Mechanosensitive ion channel
RIV7116_RS00450	COG0668	transmembrane transport
RIV7116_RS00455	COG1201	RNA secondary structure unwinding
RIV7116_RS00465	COG1408	metallophosphoesterase
RIV7116_RS00475	COG1408	metallophosphoesterase
RIV7116_RS00500	COG0628	permease
RIV7116_RS00510	COG0331	[acyl-carrier-protein] S-malonyltransferase activity
RIV7116_RS00515	COG0332	Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
RIV7116_RS00520	COG0416	fatty acid biosynthetic process
RIV7116_RS00540	COG0143	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
RIV7116_RS00560	COG0260	Presumably involved in the processing and regular turnover of intracellular proteins. Catalyzes the removal of unsubstituted N-terminal amino acids from various peptides
RIV7116_RS00580	COG1193	negative regulation of DNA recombination
RIV7116_RS00585	COG0516	GMP reductase activity
RIV7116_RS00590	COG3118	belongs to the thioredoxin family
RIV7116_RS00620	COG1459	type II secretion system
RIV7116_RS00630	COG2804	Type II secretory pathway, ATPase PulE Tfp pilus assembly pathway, ATPase PilB
RIV7116_RS00635	COG0576	Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ
RIV7116_RS00640	COG0443	Heat shock 70 kDa protein
RIV7116_RS00645	COG0484	heat shock protein binding
RIV7116_RS00650	COG0607	Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
RIV7116_RS00650	COG0425	Belongs to the sulfur carrier protein TusA family
RIV7116_RS00655	COG1162	GTPase activity
RIV7116_RS00660	COG1543	Belongs to the glycosyl hydrolase 57 family
RIV7116_RS00680	COG0337	Catalyzes the conversion of 3-deoxy-D-arabino- heptulosonate 7-phosphate (DAHP) to dehydroquinate (DHQ)
RIV7116_RS00685	COG3258	Cytochrome c
RIV7116_RS00705	COG0073	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
RIV7116_RS00710	COG0805	protein transport
RIV7116_RS00725	COG2319	Wd-40 repeat
RIV7116_RS00725	COG4249	Peptidase C14 caspase catalytic subunit p20
RIV7116_RS00750	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
RIV7116_RS00760	COG0217	transcriptional regulatory protein
RIV7116_RS00765	COG2182	Extracellular solute-binding protein
RIV7116_RS00810	COG0020	Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids
RIV7116_RS00830	COG0365	Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA
RIV7116_RS00840	COG1028	Short-chain dehydrogenase reductase Sdr
RIV7116_RS00850	COG1846	Transcriptional regulator
RIV7116_RS00875	COG0706	membrane insertase activity
RIV7116_RS00885	COG0594	ribonuclease P activity
RIV7116_RS00975	COG0465	Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins
RIV7116_RS01010	COG0486	Exhibits a very high intrinsic GTPase hydrolysis rate. Involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA- cmnm(5)s(2)U34
RIV7116_RS01025	COG3240	lipase activity
RIV7116_RS01030	COG1363	Peptidase, m42
RIV7116_RS01035	COG0517	IMP dehydrogenase activity
RIV7116_RS01035	COG0516	GMP reductase activity
RIV7116_RS01050	COG1281	Redox regulated molecular chaperone. Protects both thermally unfolding and oxidatively damaged proteins from irreversible aggregation. Plays an important role in the bacterial defense system toward oxidative stress
RIV7116_RS01070	COG0612	Peptidase, M16
RIV7116_RS01075	COG3001	Fructosamine kinase
RIV7116_RS01110	COG1468	defense response to virus
RIV7116_RS01110	COG1518	maintenance of DNA repeat elements
RIV7116_RS01115	COG1518	maintenance of DNA repeat elements
RIV7116_RS01145	COG2205	protein histidine kinase activity
RIV7116_RS01145	COG4999	Histidine kinase
RIV7116_RS01145	COG3437	response regulator, receiver
RIV7116_RS01145	COG3850	Histidine kinase
RIV7116_RS01150	COG2205	protein histidine kinase activity
RIV7116_RS01155	COG2197	response regulator
RIV7116_RS01170	COG1063	alcohol dehydrogenase
RIV7116_RS01185	COG0399	UDP-4-amino-4-deoxy-L-arabinose aminotransferase
RIV7116_RS01205	COG2148	undecaprenyl-phosphate glucose phosphotransferase activity
RIV7116_RS01215	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
RIV7116_RS01220	COG0367	asparagine synthase
RIV7116_RS01240	COG0438	transferase activity, transferring glycosyl groups
RIV7116_RS01245	COG0728	peptidoglycan biosynthetic process
RIV7116_RS01265	COG0440	acetolactate synthase activity
RIV7116_RS01270	COG1331	Highly conserved protein containing a thioredoxin domain
RIV7116_RS01275	COG0740	serine-type endopeptidase activity
RIV7116_RS01305	COG0109	protoheme IX farnesyltransferase activity
RIV7116_RS01315	COG1622	oxidoreductase activity, acting on a heme group of donors, oxygen as acceptor
RIV7116_RS01320	COG0843	Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1- 3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B
RIV7116_RS01325	COG1845	cytochrome c oxidase, subunit III
RIV7116_RS01345	COG0494	nUDIX hydrolase
RIV7116_RS01350	COG2205	protein histidine kinase activity
RIV7116_RS01360	COG0515	serine threonine protein kinase
RIV7116_RS01360	COG3266	domain, Protein
RIV7116_RS01365	COG0515	serine threonine protein kinase
RIV7116_RS01365	COG3266	domain, Protein
RIV7116_RS01380	COG0681	Belongs to the peptidase S26 family
RIV7116_RS01400	COG0744	Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors
RIV7116_RS01405	COG0162	Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two-step reaction tyrosine is first activated by ATP to form Tyr- AMP and then transferred to the acceptor end of tRNA(Tyr)
RIV7116_RS01410	COG0284	orotidine-5'-phosphate decarboxylase activity
RIV7116_RS01420	COG2852	Protein conserved in bacteria
RIV7116_RS01430	COG4251	negative regulation of phosphorylation
RIV7116_RS01435	COG0154	amidase activity
RIV7116_RS01450	COG0059	Involved in the biosynthesis of branched-chain amino acids (BCAA). Catalyzes an alkyl-migration followed by a ketol- acid reduction of (S)-2-acetolactate (S2AL) to yield (R)-2,3- dihydroxy-isovalerate. In the isomerase reaction, S2AL is rearranged via a Mg-dependent methyl migration to produce 3- hydroxy-3-methyl-2-ketobutyrate (HMKB). In the reductase reaction, this 2-ketoacid undergoes a metal-dependent reduction by NADPH to yield (R)-2,3-dihydroxy-isovalerate
RIV7116_RS01460	COG0667	Aldo Keto reductase
RIV7116_RS01485	COG0515	serine threonine protein kinase
RIV7116_RS01495	COG3266	domain, Protein
RIV7116_RS01495	COG0515	serine threonine protein kinase
RIV7116_RS01505	COG0297	glycogen (starch) synthase activity
RIV7116_RS01545	COG0443	Heat shock 70 kDa protein
RIV7116_RS01555	COG1118	Part of the ABC transporter complex CysAWTP involved in sulfate thiosulfate import. Responsible for energy coupling to the transport system
RIV7116_RS01580	COG0668	transmembrane transport
RIV7116_RS01590	COG0125	Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis
RIV7116_RS01595	COG3118	belongs to the thioredoxin family
RIV7116_RS01600	COG0640	Transcriptional regulator
RIV7116_RS01635	COG1733	regulation of RNA biosynthetic process
RIV7116_RS01655	COG0546	phosphoglycolate phosphatase activity
RIV7116_RS01675	COG0800	Aldolase
RIV7116_RS01685	COG1702	phosphate starvation-inducible protein PhoH
RIV7116_RS01695	COG0228	four-way junction DNA binding
RIV7116_RS01700	COG0541	Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY
RIV7116_RS01710	COG0006	proline dipeptidase activity
RIV7116_RS01725	COG0612	Peptidase, M16
RIV7116_RS01730	COG0612	Peptidase, M16
RIV7116_RS01785	COG4310	Domain of unknown function (DUF2172)
RIV7116_RS01795	COG2120	A mycothiol (MSH, N-acetylcysteinyl-glucosaminyl- inositol) S-conjugate amidase, it recycles conjugated MSH to the N-acetyl cysteine conjugate (AcCys S-conjugate, a mercapturic acid) and the MSH precursor. Involved in MSH-dependent detoxification of a number of alkylating agents and antibiotics
RIV7116_RS01810	COG0457	Tetratricopeptide repeat
RIV7116_RS01865	COG2274	protein secretion by the type I secretion system
RIV7116_RS01885	COG2274	protein secretion by the type I secretion system
RIV7116_RS01895	COG0141	Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine
RIV7116_RS01905	COG0568	sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released
RIV7116_RS01910	COG0458	carbamoyl-phosphate synthase (glutamine-hydrolyzing) activity
RIV7116_RS01915	COG0783	Belongs to the Dps family
RIV7116_RS01930	COG0556	nucleotide-excision repair
RIV7116_RS01940	COG0036	Belongs to the ribulose-phosphate 3-epimerase family
RIV7116_RS01945	COG1404	Belongs to the peptidase S8 family
RIV7116_RS01985	COG0628	permease
RIV7116_RS01995	COG1316	TRANSCRIPTIONal
RIV7116_RS02010	COG0528	UMP kinase activity
RIV7116_RS02015	COG0233	cytoplasmic translational termination
RIV7116_RS02020	COG0492	ferredoxin-NADP+ reductase activity
RIV7116_RS02080	COG0777	Component of the acetyl coenzyme A carboxylase (ACC) complex. Biotin carboxylase (BC) catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the transcarboxylase to acetyl-CoA to form malonyl- CoA
RIV7116_RS02085	COG1989	Cleaves type-4 fimbrial leader sequence and methylates the N-terminal (generally Phe) residue
RIV7116_RS02095	COG0473	3-isopropylmalate dehydrogenase activity
RIV7116_RS02100	COG1131	(ABC) transporter
RIV7116_RS02115	COG1131	(ABC) transporter
RIV7116_RS02125	COG0074	Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit
RIV7116_RS02130	COG0045	succinate-CoA ligase (ADP-forming) activity
RIV7116_RS02150	COG1071	oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor
RIV7116_RS02165	COG0191	fructose-bisphosphate aldolase activity
RIV7116_RS02185	COG4555	ABC transporter
RIV7116_RS02190	COG0489	protein tyrosine kinase activity
RIV7116_RS02200	COG1132	(ABC) transporter
RIV7116_RS02245	COG0489	protein tyrosine kinase activity
RIV7116_RS02275	COG0367	asparagine synthase
RIV7116_RS02310	COG3273	potassium ion transport
RIV7116_RS02310	COG0471	metal ion transport
RIV7116_RS02315	COG0529	Catalyzes the synthesis of activated sulfate
RIV7116_RS02320	COG2046	Belongs to the sulfate adenylyltransferase family
RIV7116_RS02325	COG1215	transferase activity, transferring glycosyl groups
RIV7116_RS02360	COG5039	Polysaccharide pyruvyl transferase
RIV7116_RS02365	COG2244	polysaccharide biosynthetic process
RIV7116_RS02370	COG1922	lipopolysaccharide N-acetylmannosaminouronosyltransferase activity
RIV7116_RS02385	COG0766	Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine
RIV7116_RS02395	COG0566	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
RIV7116_RS02405	COG1179	involved in molybdopterin and THIamine biosynthesis family 1
RIV7116_RS02425	COG0702	epimerase
RIV7116_RS02430	COG0515	serine threonine protein kinase
RIV7116_RS02430	COG1357	PFAM Pentapeptide repeats (8 copies)
RIV7116_RS02465	COG0714	Associated with various cellular activities
RIV7116_RS02470	COG0196	riboflavin kinase activity
RIV7116_RS02475	COG1234	tRNA 3'-trailer cleavage
RIV7116_RS02480	COG0496	Nucleotidase that shows phosphatase activity on nucleoside 5'-monophosphates
RIV7116_RS02485	COG0016	Belongs to the class-II aminoacyl-tRNA synthetase family. Phe-tRNA synthetase alpha subunit type 1 subfamily
RIV7116_RS02490	COG0514	ATP-dependent DNA helicase (RecQ)
RIV7116_RS02520	COG1032	radical SAM domain protein
RIV7116_RS02525	COG0515	serine threonine protein kinase
RIV7116_RS02525	COG2815	serine threonine protein kinase
RIV7116_RS02535	COG0784	Response regulator, receiver
RIV7116_RS02535	COG5002	protein histidine kinase activity
RIV7116_RS02535	COG2198	Histidine kinase
RIV7116_RS02545	COG1073	alpha beta
RIV7116_RS02550	COG0463	Glycosyl transferase, family 2
RIV7116_RS02555	COG0119	Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate)
RIV7116_RS02565	COG1357	PFAM Pentapeptide repeats (8 copies)
RIV7116_RS02565	COG0515	serine threonine protein kinase
RIV7116_RS02585	COG4121	Catalyzes the last two steps in the biosynthesis of 5- methylaminomethyl-2-thiouridine (mnm(5)s(2)U) at the wobble position (U34) in tRNA. Catalyzes the FAD-dependent demodification of cmnm(5)s(2)U34 to nm(5)s(2)U34, followed by the transfer of a methyl group from S-adenosyl-L-methionine to nm(5)s(2)U34, to form mnm(5)s(2)U34
RIV7116_RS02585	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
RIV7116_RS02590	COG3437	response regulator, receiver
RIV7116_RS02595	COG1207	Catalyzes the last two sequential reactions in the de novo biosynthetic pathway for UDP-N-acetylglucosamine (UDP- GlcNAc). The C-terminal domain catalyzes the transfer of acetyl group from acetyl coenzyme A to glucosamine-1-phosphate (GlcN-1-P) to produce N-acetylglucosamine-1-phosphate (GlcNAc-1-P), which is converted into UDP-GlcNAc by the transfer of uridine 5- monophosphate (from uridine 5-triphosphate), a reaction catalyzed by the N-terminal domain
RIV7116_RS02600	COG1446	asparaginase
RIV7116_RS02610	COG0167	dihydroorotate dehydrogenase activity
RIV7116_RS02620	COG2304	oxidoreductase activity
RIV7116_RS02625	COG0546	phosphoglycolate phosphatase activity
RIV7116_RS02640	COG0746	molybdenum cofactor guanylyltransferase activity
RIV7116_RS02650	COG0243	molybdopterin cofactor binding
RIV7116_RS02655	COG2223	nitrite transmembrane transporter activity
RIV7116_RS02670	COG0046	Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL
RIV7116_RS02675	COG0034	Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine
RIV7116_RS02685	COG0601	transmembrane transport
RIV7116_RS02690	COG0503	Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis
RIV7116_RS02720	COG0597	This protein specifically catalyzes the removal of signal peptides from prolipoproteins
RIV7116_RS02725	COG1268	BioY protein
RIV7116_RS02730	COG0226	Part of the ABC transporter complex PstSACB involved in phosphate import
RIV7116_RS02740	COG0581	inorganic phosphate transmembrane transporter activity
RIV7116_RS02745	COG1117	ATPase-coupled phosphate ion transmembrane transporter activity
RIV7116_RS02765	COG0456	acetyltransferase
RIV7116_RS02775	COG0079	Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily
RIV7116_RS02785	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
RIV7116_RS02790	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
RIV7116_RS02800	COG2265	Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family
RIV7116_RS02820	COG0017	Asparaginyl-tRNA synthetase
RIV7116_RS02835	COG0135	phosphoribosylanthranilate isomerase activity
RIV7116_RS02840	COG2234	aminopeptidase activity
RIV7116_RS02875	COG3629	intracellular signal transduction
RIV7116_RS02875	COG3903	Transcriptional regulator
RIV7116_RS02885	COG1613	Sulfate ABC transporter periplasmic sulfate-binding protein
RIV7116_RS02890	COG0555	PFAM binding-protein-dependent transport systems inner membrane component
RIV7116_RS02895	COG4208	sulfate ABC transporter
RIV7116_RS02900	COG0745	RESPONSE REGULATOR receiver
RIV7116_RS02905	COG0234	Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter
RIV7116_RS02910	COG0459	protein refolding
RIV7116_RS02950	COG0784	Response regulator, receiver
RIV7116_RS02950	COG2205	protein histidine kinase activity
RIV7116_RS02970	COG0456	acetyltransferase
RIV7116_RS02975	COG0789	Transcriptional regulator
RIV7116_RS03010	COG0829	nickel cation binding
RIV7116_RS03015	COG0831	urea catabolic process
RIV7116_RS03020	COG0832	Belongs to the urease beta subunit family
RIV7116_RS03045	COG0804	urea catabolic process
RIV7116_RS03060	COG1012	belongs to the aldehyde dehydrogenase family
RIV7116_RS03065	COG2041	Part of the MsrPQ system that repairs oxidized periplasmic proteins containing methionine sulfoxide residues (Met-O), using respiratory chain electrons. Thus protects these proteins from oxidative-stress damage caused by reactive species of oxygen and chlorine generated by the host defense mechanisms. MsrPQ is essential for the maintenance of envelope integrity under bleach stress, rescuing a wide series of structurally unrelated periplasmic proteins from methionine oxidation. The catalytic subunit MsrP is non-stereospecific, being able to reduce both (R-) and (S-) diastereoisomers of methionine sulfoxide
RIV7116_RS03070	COG0333	Belongs to the bacterial ribosomal protein bL32 family
RIV7116_RS03090	COG0595	An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and or decay
RIV7116_RS03095	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
RIV7116_RS03100	COG0136	Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L- aspartyl-4-phosphate
RIV7116_RS03105	COG0544	peptidyl-prolyl cis-trans isomerase activity
RIV7116_RS03110	COG0740	serine-type endopeptidase activity
RIV7116_RS03115	COG1219	ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP
RIV7116_RS03125	COG1725	Transcriptional regulator
RIV7116_RS03130	COG0412	Dienelactone hydrolase
RIV7116_RS03135	COG0539	negative regulation of cytoplasmic translation
RIV7116_RS03165	COG0379	Catalyzes the condensation of iminoaspartate with dihydroxyacetone phosphate to form quinolinate
RIV7116_RS03190	COG0515	serine threonine protein kinase
RIV7116_RS03200	COG0439	Biotin carboxylase
RIV7116_RS03220	COG0755	Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes
RIV7116_RS03230	COG0827	DNA restriction-modification system
RIV7116_RS03235	COG0827	DNA restriction-modification system
RIV7116_RS03260	COG2226	methyltransferase
RIV7116_RS03275	COG0787	Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids
RIV7116_RS03290	COG2197	response regulator
RIV7116_RS03300	COG0079	Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily
RIV7116_RS03305	COG0776	regulation of translation
RIV7116_RS03330	COG0285	dihydrofolate synthase activity
RIV7116_RS03360	COG0024	Methionine aminopeptidase
RIV7116_RS03365	COG1573	uracil-dna glycosylase
RIV7116_RS03385	COG4577	Carbon dioxide concentrating mechanism carboxysome shell protein
RIV7116_RS03410	COG1741	Belongs to the pirin family
RIV7116_RS03430	COG0079	Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily
RIV7116_RS03435	COG0561	phosphatase activity
RIV7116_RS03445	COG3266	domain, Protein
RIV7116_RS03445	COG0515	serine threonine protein kinase
RIV7116_RS03450	COG3266	domain, Protein
RIV7116_RS03450	COG0515	serine threonine protein kinase
RIV7116_RS03465	COG0268	Binds directly to 16S ribosomal RNA
RIV7116_RS03470	COG0084	hydrolase, TatD family'
RIV7116_RS03480	COG0085	RNA polymerase activity
RIV7116_RS03485	COG0086	DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
RIV7116_RS03490	COG0086	DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
RIV7116_RS03495	COG2730	Belongs to the glycosyl hydrolase 5 (cellulase A) family
RIV7116_RS03530	COG3405	Belongs to the glycosyl hydrolase 8 (cellulase D) family
RIV7116_RS03540	COG1215	transferase activity, transferring glycosyl groups
RIV7116_RS03550	COG0388	Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source
RIV7116_RS03565	COG1018	Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress
RIV7116_RS03570	COG1049	propionate catabolic process, 2-methylcitrate cycle
RIV7116_RS03575	COG0251	oxidation-reduction process
RIV7116_RS03610	COG2205	protein histidine kinase activity
RIV7116_RS03610	COG0784	Response regulator, receiver
RIV7116_RS03615	COG0652	PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides
RIV7116_RS03620	COG0691	Required for rescue of stalled ribosomes mediated by trans-translation. Binds to transfer-messenger RNA (tmRNA), required for stable association of tmRNA with ribosomes. tmRNA and SmpB together mimic tRNA shape, replacing the anticodon stem-loop with SmpB. tmRNA is encoded by the ssrA gene
RIV7116_RS03635	COG0611	Catalyzes the ATP-dependent phosphorylation of thiamine- monophosphate (TMP) to form thiamine-pyrophosphate (TPP), the active form of vitamin B1
RIV7116_RS03640	COG0057	glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity
RIV7116_RS03645	COG0773	UDP-N-acetylmuramate-L-alanine ligase activity
RIV7116_RS03650	COG0812	UDP-N-acetylmuramate dehydrogenase activity
RIV7116_RS03655	COG0718	Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection
RIV7116_RS03660	COG0394	Belongs to the low molecular weight phosphotyrosine protein phosphatase family
RIV7116_RS03680	COG3206	protein involved in exopolysaccharide biosynthesis
RIV7116_RS03680	COG0489	protein tyrosine kinase activity
RIV7116_RS03705	COG2198	Histidine kinase
RIV7116_RS03705	COG0784	Response regulator, receiver
RIV7116_RS03705	COG2205	protein histidine kinase activity
RIV7116_RS03715	COG0745	RESPONSE REGULATOR receiver
RIV7116_RS03725	COG1981	membrane
RIV7116_RS03740	COG1126	abc transporter atp-binding protein
RIV7116_RS03745	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
RIV7116_RS03755	COG0692	Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine
RIV7116_RS03760	COG0037	tRNA processing
RIV7116_RS03770	COG0784	Response regulator, receiver
RIV7116_RS03785	COG0840	transmembrane signaling receptor activity
RIV7116_RS03790	COG0784	Response regulator, receiver
RIV7116_RS03790	COG0643	Histidine kinase
RIV7116_RS03790	COG0643	Histidine kinase
RIV7116_RS03790	COG2198	Histidine kinase
RIV7116_RS03790	COG2198	Histidine kinase
RIV7116_RS03790	COG0784	Response regulator, receiver
RIV7116_RS03795	COG1505	serine-type exopeptidase activity
RIV7116_RS03815	COG0358	DNA primase activity
RIV7116_RS03825	COG0792	nuclease activity
RIV7116_RS03835	COG0809	Transfers and isomerizes the ribose moiety from AdoMet to the 7-aminomethyl group of 7-deazaguanine (preQ1-tRNA) to give epoxyqueuosine (oQ-tRNA)
RIV7116_RS03850	COG2203	Gaf domain
RIV7116_RS03850	COG3706	GGDEF domain
RIV7116_RS03850	COG5001	Diguanylate cyclase
RIV7116_RS03850	COG4251	negative regulation of phosphorylation
RIV7116_RS03855	COG0251	oxidation-reduction process
RIV7116_RS03865	COG1640	4-alpha-glucanotransferase
RIV7116_RS03875	COG1187	pseudouridine synthase activity
RIV7116_RS03885	COG0575	Belongs to the CDS family
RIV7116_RS03895	COG0515	serine threonine protein kinase
RIV7116_RS03905	COG1826	Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes
RIV7116_RS03910	COG0189	ligase activity
RIV7116_RS03910	COG0769	Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan
RIV7116_RS03915	COG4242	Belongs to the peptidase S51 family
RIV7116_RS03920	COG0336	Belongs to the RNA methyltransferase TrmD family
RIV7116_RS03925	COG0245	2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase activity
RIV7116_RS03930	COG0747	negative chemotaxis
RIV7116_RS03935	COG1691	(AIR) carboxylase
RIV7116_RS03945	COG0165	Argininosuccinate lyase
RIV7116_RS03965	COG1521	Catalyzes the phosphorylation of pantothenate (Pan), the first step in CoA biosynthesis
RIV7116_RS03995	COG0426	domain, Protein
RIV7116_RS03995	COG1853	conserved protein domain typically associated with flavoprotein oxygenases, DIM6 NTAB family
RIV7116_RS04000	COG0426	domain, Protein
RIV7116_RS04000	COG1853	conserved protein domain typically associated with flavoprotein oxygenases, DIM6 NTAB family
RIV7116_RS04020	COG1917	Cupin 2, conserved barrel domain protein
RIV7116_RS04020	COG2207	Transcriptional regulator
RIV7116_RS04040	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
RIV7116_RS04055	COG0335	large ribosomal subunit rRNA binding
RIV7116_RS04070	COG0690	P-P-bond-hydrolysis-driven protein transmembrane transporter activity
RIV7116_RS04075	COG0250	Participates in transcription elongation, termination and antitermination
RIV7116_RS04080	COG0080	Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors
RIV7116_RS04085	COG0081	regulation of translation
RIV7116_RS04090	COG0244	Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors
RIV7116_RS04095	COG0222	ribosome binding
RIV7116_RS04100	COG3266	domain, Protein
RIV7116_RS04100	COG0515	serine threonine protein kinase
RIV7116_RS04115	COG0542	response to heat
RIV7116_RS04120	COG0456	acetyltransferase
RIV7116_RS04125	COG0019	diaminopimelate decarboxylase activity
RIV7116_RS04130	COG1624	Catalyzes the condensation of 2 ATP molecules into cyclic di-AMP (c-di-AMP), a second messenger used to regulate differing processes in different bacteria
RIV7116_RS04135	COG0020	Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids
RIV7116_RS04150	COG0484	heat shock protein binding
RIV7116_RS04155	COG0443	Heat shock 70 kDa protein
RIV7116_RS04160	COG2234	aminopeptidase activity
RIV7116_RS04175	COG0745	RESPONSE REGULATOR receiver
RIV7116_RS04180	COG0793	Belongs to the peptidase S41A family
RIV7116_RS04180	COG3409	Peptidoglycan-binding domain 1 protein
RIV7116_RS04210	COG0155	Belongs to the nitrite and sulfite reductase 4Fe-4S domain family
RIV7116_RS04245	COG1385	rRNA (uridine-N3-)-methyltransferase activity
RIV7116_RS04290	COG0519	Catalyzes the synthesis of GMP from XMP
RIV7116_RS04305	COG1132	(ABC) transporter
RIV7116_RS04335	COG1472	Belongs to the glycosyl hydrolase 3 family
RIV7116_RS04340	COG2226	methyltransferase
RIV7116_RS04375	COG2110	phosphatase homologous to the C-terminal domain of histone macroH2A1
RIV7116_RS04405	COG2340	Cysteine-rich secretory protein family
RIV7116_RS04410	COG1404	Belongs to the peptidase S8 family
RIV7116_RS04425	COG1836	PFAM Integral membrane protein DUF92
RIV7116_RS04450	COG0745	RESPONSE REGULATOR receiver
RIV7116_RS04465	COG0720	synthase
RIV7116_RS04480	COG0119	Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate)
RIV7116_RS04490	COG0477	Major facilitator Superfamily
RIV7116_RS04495	COG3755	Protein conserved in bacteria
RIV7116_RS04505	COG0861	Integral membrane protein TerC family
RIV7116_RS04510	COG0105	UTP biosynthetic process
RIV7116_RS04515	COG1166	arginine decarboxylase activity
RIV7116_RS04520	COG1208	COG1208 Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis translation initiation factor 2B, gamma epsilon subunits eIF-2Bgamma eIF-2Bepsilon
RIV7116_RS04535	COG0628	permease
RIV7116_RS04540	COG0259	pyridoxamine-phosphate oxidase activity
RIV7116_RS04570	COG0548	Belongs to the acetylglutamate kinase family. ArgB subfamily
RIV7116_RS04575	COG0703	Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate
RIV7116_RS04580	COG3903	Transcriptional regulator
RIV7116_RS04580	COG2319	Wd-40 repeat
RIV7116_RS04595	COG0163	prenyltransferase activity
RIV7116_RS04600	COG0557	exoribonuclease II activity
RIV7116_RS04610	COG0852	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
RIV7116_RS04615	COG0377	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
RIV7116_RS04620	COG0838	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
RIV7116_RS04625	COG1773	rubredoxin
RIV7116_RS04630	COG4447	cellulose binding
RIV7116_RS04695	COG0206	Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity
RIV7116_RS04700	COG0189	ligase activity
RIV7116_RS04705	COG0695	Has a glutathione-disulfide oxidoreductase activity in the presence of NADPH and glutathione reductase. Reduces low molecular weight disulfides and proteins
RIV7116_RS04710	COG2262	GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis
RIV7116_RS04720	COG0745	RESPONSE REGULATOR receiver
RIV7116_RS04750	COG1060	Radical SAM enzyme that catalyzes the addition of the adenosyl radical to the double bond of 3- (1- carboxyvinyl)oxy benzoate, leading to aminodeoxyfutalosine (AFL), a key intermediate in the formation of menaquinone (MK, vitamin K2) from chorismate
RIV7116_RS04775	COG0005	The purine nucleoside phosphorylases catalyze the phosphorolytic breakdown of the N-glycosidic bond in the beta- (deoxy)ribonucleoside molecules, with the formation of the corresponding free purine bases and pentose-1-phosphate
RIV7116_RS04790	COG2046	Belongs to the sulfate adenylyltransferase family
RIV7116_RS04805	COG5002	protein histidine kinase activity
RIV7116_RS04810	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
RIV7116_RS04825	COG0482	sulfurtransferase activity
RIV7116_RS04840	COG0062	Bifunctional enzyme that catalyzes the epimerization of the S- and R-forms of NAD(P)HX and the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. This allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration
RIV7116_RS04840	COG0063	ADP-dependent NAD(P)H-hydrate dehydratase activity
RIV7116_RS04850	COG2066	Belongs to the glutaminase family
RIV7116_RS04855	COG1047	Peptidyl-prolyl cis-trans
RIV7116_RS04875	COG0277	FAD linked oxidase domain protein
RIV7116_RS04905	COG0577	efflux transmembrane transporter activity
RIV7116_RS04905	COG1136	(ABC) transporter
RIV7116_RS04915	COG0324	Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A)
RIV7116_RS04920	COG0187	DNA topoisomerase II activity
RIV7116_RS04920	COG1372	Participates in initiation and elongation during chromosome replication
RIV7116_RS04925	COG0568	sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released
RIV7116_RS04930	COG0276	Catalyzes the ferrous insertion into protoporphyrin IX
RIV7116_RS04940	COG0188	A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner
RIV7116_RS04955	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
RIV7116_RS04960	COG1136	(ABC) transporter
RIV7116_RS04960	COG0577	efflux transmembrane transporter activity
RIV7116_RS04965	COG1136	(ABC) transporter
RIV7116_RS04970	COG0546	phosphoglycolate phosphatase activity
RIV7116_RS04975	COG1600	Catalyzes the conversion of epoxyqueuosine (oQ) to queuosine (Q), which is a hypermodified base found in the wobble positions of tRNA(Asp), tRNA(Asn), tRNA(His) and tRNA(Tyr)
RIV7116_RS04980	COG3631	Ketosteroid isomerase-related protein
RIV7116_RS05000	COG2204	response regulator
RIV7116_RS05005	COG2197	response regulator
RIV7116_RS05010	COG1922	lipopolysaccharide N-acetylmannosaminouronosyltransferase activity
RIV7116_RS05015	COG2884	Cell division ATP-binding protein ftsE
RIV7116_RS05060	COG4783	chaperone-mediated protein folding
RIV7116_RS05085	COG0627	Serine hydrolase involved in the detoxification of formaldehyde
RIV7116_RS05110	COG1225	Alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen
RIV7116_RS05120	COG1366	Belongs to the anti-sigma-factor antagonist family
RIV7116_RS05130	COG1530	ribonuclease E activity
RIV7116_RS05135	COG0164	Endonuclease that specifically degrades the RNA of RNA- DNA hybrids
RIV7116_RS05145	COG0077	Prephenate dehydratase
RIV7116_RS05145	COG1605	Chorismate mutase
RIV7116_RS05150	COG0466	ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short-lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner
RIV7116_RS05155	COG0051	transcription antitermination factor activity, RNA binding
RIV7116_RS05160	COG0050	This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis
RIV7116_RS05165	COG0480	Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome
RIV7116_RS05170	COG0049	tRNA binding
RIV7116_RS05175	COG0048	Interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone. Located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side and probably holding the rRNA structure together. The combined cluster of proteins S8, S12 and S17 appears to hold together the shoulder and platform of the 30S subunit
RIV7116_RS05180	COG0316	Belongs to the HesB IscA family
RIV7116_RS05185	COG0836	Belongs to the mannose-6-phosphate isomerase type 2 family
RIV7116_RS05185	COG0662	Cupin 2, conserved barrel domain protein
RIV7116_RS05200	COG0067	glutamate synthase
RIV7116_RS05200	COG0069	glutamate synthase activity
RIV7116_RS05200	COG0070	glutamate synthase
RIV7116_RS05215	COG2076	Multidrug Resistance protein
RIV7116_RS05220	COG0463	Glycosyl transferase, family 2
RIV7116_RS05245	COG0743	1-deoxy-D-xylulose-5-phosphate reductoisomerase activity
RIV7116_RS05250	COG0824	Thioesterase
RIV7116_RS05270	COG1361	Conserved repeat domain
RIV7116_RS05270	COG3266	domain, Protein
RIV7116_RS05270	COG2911	Protein conserved in bacteria
RIV7116_RS05275	COG0784	Response regulator, receiver
RIV7116_RS05275	COG2205	protein histidine kinase activity
RIV7116_RS05275	COG5002	protein histidine kinase activity
RIV7116_RS05290	COG0242	peptide deformylase activity
RIV7116_RS05305	COG0608	single-stranded DNA 5'-3' exodeoxyribonuclease activity
RIV7116_RS05305	COG4199	Single-strand DNA-specific exonuclease, C terminal domain
RIV7116_RS05315	COG0793	Belongs to the peptidase S41A family
RIV7116_RS05320	COG1215	transferase activity, transferring glycosyl groups
RIV7116_RS05325	COG0745	RESPONSE REGULATOR receiver
RIV7116_RS05340	COG0631	protein serine/threonine phosphatase activity
RIV7116_RS05365	COG0547	Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'-phosphoribosyl)-anthranilate (PRA)
RIV7116_RS05370	COG0583	DNA-binding transcription factor activity
RIV7116_RS05375	COG0723	plastoquinol--plastocyanin reductase activity
RIV7116_RS05390	COG0853	Catalyzes the pyruvoyl-dependent decarboxylation of aspartate to produce beta-alanine
RIV7116_RS05395	COG0221	Catalyzes the hydrolysis of inorganic pyrophosphate (PPi) forming two phosphate ions
RIV7116_RS05405	COG2006	4fe-4S ferredoxin, iron-sulfur binding domain protein
RIV7116_RS05410	COG1027	Aspartate ammonia-lyase
RIV7116_RS05415	COG0558	Belongs to the CDP-alcohol phosphatidyltransferase class-I family
RIV7116_RS05450	COG1089	Catalyzes the conversion of GDP-D-mannose to GDP-4- dehydro-6-deoxy-D-mannose
RIV7116_RS05455	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
RIV7116_RS05485	COG0212	Belongs to the 5-formyltetrahydrofolate cyclo-ligase family
RIV7116_RS05490	COG2203	Gaf domain
RIV7116_RS05490	COG0840	transmembrane signaling receptor activity
RIV7116_RS05495	COG2148	undecaprenyl-phosphate glucose phosphotransferase activity
RIV7116_RS05515	COG2038	nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase activity
RIV7116_RS05535	COG0730	response to heat
RIV7116_RS05540	COG4106	trans-aconitate 2-methyltransferase activity
RIV7116_RS05545	COG0583	DNA-binding transcription factor activity
RIV7116_RS05560	COG0826	peptidase U32
RIV7116_RS05595	COG0739	heme binding
RIV7116_RS05605	COG1496	oxidoreductase activity
RIV7116_RS05615	COG4991	sh3 domain protein
RIV7116_RS05615	COG3064	Membrane
RIV7116_RS05615	COG0515	serine threonine protein kinase
RIV7116_RS05620	COG4991	sh3 domain protein
RIV7116_RS05620	COG3064	Membrane
RIV7116_RS05620	COG0515	serine threonine protein kinase
RIV7116_RS05655	COG0106	1-(5-phosphoribosyl)-5- 5-phosphoribosylamino)methylideneamino imidazole-4-carboxamide isomerase
RIV7116_RS05670	COG0745	RESPONSE REGULATOR receiver
RIV7116_RS05675	COG5002	protein histidine kinase activity
RIV7116_RS05680	COG0704	Plays a role in the regulation of phosphate uptake
RIV7116_RS05690	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
RIV7116_RS05695	COG3659	wide pore channel activity
RIV7116_RS05700	COG3659	wide pore channel activity
RIV7116_RS05705	COG3659	wide pore channel activity
RIV7116_RS05725	COG0463	Glycosyl transferase, family 2
RIV7116_RS05730	COG1060	Radical SAM enzyme that catalyzes the addition of the adenosyl radical to the double bond of 3- (1- carboxyvinyl)oxy benzoate, leading to aminodeoxyfutalosine (AFL), a key intermediate in the formation of menaquinone (MK, vitamin K2) from chorismate
RIV7116_RS05765	COG1008	NDH-1 shuttles electrons from NAD(P)H, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be plastoquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
RIV7116_RS05770	COG1009	NADH ubiquinone oxidoreductase subunit 5 chain L Multisubunit Na H antiporter, MnhA subunit
RIV7116_RS05775	COG3118	belongs to the thioredoxin family
RIV7116_RS05785	COG0583	DNA-binding transcription factor activity
RIV7116_RS05790	COG0515	serine threonine protein kinase
RIV7116_RS05795	COG0226	Part of the ABC transporter complex PstSACB involved in phosphate import
RIV7116_RS05805	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
RIV7116_RS05815	COG0561	phosphatase activity
RIV7116_RS05825	COG0749	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
RIV7116_RS05825	COG0258	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
RIV7116_RS05845	COG1672	PFAM Archaeal ATPase
RIV7116_RS05850	COG1305	Transglutaminase-like
RIV7116_RS05855	COG2170	ATP-dependent carboxylate-amine ligase which exhibits weak glutamate--cysteine ligase activity
RIV7116_RS05860	COG0474	ATPase, P-type transporting, HAD superfamily, subfamily IC
RIV7116_RS05865	COG1195	it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP
RIV7116_RS05870	COG0574	Belongs to the PEP-utilizing enzyme family
RIV7116_RS05870	COG1080	General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr)
RIV7116_RS05885	COG3659	wide pore channel activity
RIV7116_RS05905	COG1122	ATPase activity
RIV7116_RS05915	COG0310	cobalt ion transport
RIV7116_RS05920	COG2132	Multicopper oxidase
RIV7116_RS05935	COG0672	)-iron permease
RIV7116_RS05955	COG1420	regulation of RNA biosynthetic process
RIV7116_RS05975	COG1045	serine acetyltransferase
RIV7116_RS05990	COG0209	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
RIV7116_RS06000	COG0724	RNA recognition motif
RIV7116_RS06005	COG0158	D-fructose-1,6-bisphosphate 1-phosphohydrolase class 1
RIV7116_RS06010	COG0176	Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway
RIV7116_RS06015	COG0364	Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone
RIV7116_RS06020	COG3429	Glucose-6-phosphate dehydrogenase subunit
RIV7116_RS06020	COG3409	Peptidoglycan-binding domain 1 protein
RIV7116_RS06025	COG1797	cobyrinic acid a,c-diamide synthase activity
RIV7116_RS06050	COG0290	IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins
RIV7116_RS06055	COG2267	carboxylic ester hydrolase activity
RIV7116_RS06070	COG0621	Catalyzes the methylthiolation of N6- (dimethylallyl)adenosine (i(6)A), leading to the formation of 2- methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine
RIV7116_RS06075	COG4095	Psort location CytoplasmicMembrane, score
RIV7116_RS06085	COG0082	Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system
RIV7116_RS06090	COG1028	Short-chain dehydrogenase reductase Sdr
RIV7116_RS06105	COG3629	intracellular signal transduction
RIV7116_RS06105	COG3903	Transcriptional regulator
RIV7116_RS06120	COG3093	addiction module antidote protein HigA
RIV7116_RS06130	COG4636	protein conserved in cyanobacteria
RIV7116_RS06145	COG0320	Catalyzes the radical-mediated insertion of two sulfur atoms into the C-6 and C-8 positions of the octanoyl moiety bound to the lipoyl domains of lipoate-dependent enzymes, thereby converting the octanoylated domains into lipoylated derivatives
RIV7116_RS06160	COG0116	Belongs to the methyltransferase superfamily
RIV7116_RS06190	COG0240	glycerol-3-phosphate dehydrogenase [NAD(P)+] activity
RIV7116_RS06195	COG0568	sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released
RIV7116_RS06200	COG0735	belongs to the Fur family
RIV7116_RS06215	COG2202	Pas domain
RIV7116_RS06215	COG2205	protein histidine kinase activity
RIV7116_RS06230	COG1053	succinate dehydrogenase
RIV7116_RS06260	COG2119	membrane
RIV7116_RS06265	COG0628	permease
RIV7116_RS06280	COG1819	glycosyl
RIV7116_RS06300	COG0702	epimerase
RIV7116_RS06320	COG4783	chaperone-mediated protein folding
RIV7116_RS06335	COG0514	ATP-dependent DNA helicase (RecQ)
RIV7116_RS06345	COG1403	HNH endonuclease
RIV7116_RS06360	COG0550	Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone
RIV7116_RS06375	COG0515	serine threonine protein kinase
RIV7116_RS06375	COG2815	serine threonine protein kinase
RIV7116_RS06380	COG2072	flavoprotein involved in K transport
RIV7116_RS06390	COG0297	glycogen (starch) synthase activity
RIV7116_RS06395	COG0181	hydroxymethylbilane synthase activity
RIV7116_RS06410	COG0008	Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu)
RIV7116_RS06425	COG0819	Catalyzes an amino-pyrimidine hydrolysis reaction at the C5' of the pyrimidine moiety of thiamine compounds, a reaction that is part of a thiamine salvage pathway
RIV7116_RS06435	COG0129	dihydroxy-acid dehydratase activity
RIV7116_RS06445	COG3829	transcription factor binding
RIV7116_RS06470	COG5002	protein histidine kinase activity
RIV7116_RS06470	COG3447	MASE1 domain protein
RIV7116_RS06470	COG5001	Diguanylate cyclase
RIV7116_RS06565	COG3437	response regulator, receiver
RIV7116_RS06565	COG2770	Histidine kinase
RIV7116_RS06585	COG2127	Involved in the modulation of the specificity of the ClpAP-mediated ATP-dependent protein degradation
RIV7116_RS06620	COG1131	(ABC) transporter
RIV7116_RS06620	COG1716	ATPase activity
RIV7116_RS06620	COG0842	Transport permease protein
RIV7116_RS06630	COG0515	serine threonine protein kinase
RIV7116_RS06635	COG5002	protein histidine kinase activity
RIV7116_RS06635	COG5000	phosphorelay sensor kinase activity
RIV7116_RS06640	COG0515	serine threonine protein kinase
RIV7116_RS06640	COG2815	serine threonine protein kinase
RIV7116_RS06670	COG0779	Required for maturation of 30S ribosomal subunits
RIV7116_RS06675	COG0195	Participates in both transcription termination and antitermination
RIV7116_RS06680	COG0532	One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex
RIV7116_RS06680	COG3266	domain, Protein
RIV7116_RS06705	COG1190	Belongs to the class-II aminoacyl-tRNA synthetase family
RIV7116_RS06740	COG5002	protein histidine kinase activity
RIV7116_RS06765	COG0855	Catalyzes the reversible transfer of the terminal phosphate of ATP to form a long-chain polyphosphate (polyP)
RIV7116_RS06770	COG2201	protein-glutamate methylesterase activity
RIV7116_RS06785	COG3706	GGDEF domain
RIV7116_RS06785	COG5001	Diguanylate cyclase
RIV7116_RS06785	COG2203	Gaf domain
RIV7116_RS06785	COG4251	negative regulation of phosphorylation
RIV7116_RS06810	COG2360	Functions in the N-end rule pathway of protein degradation where it conjugates Leu, Phe and, less efficiently, Met from aminoacyl-tRNAs to the N-termini of proteins containing an N-terminal arginine or lysine
RIV7116_RS06820	COG0199	Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site
RIV7116_RS06825	COG0177	DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate
RIV7116_RS06830	COG0750	zinc metalloprotease
RIV7116_RS06835	COG0172	Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L-seryl-tRNA(Sec), which will be further converted into selenocysteinyl-tRNA(Sec)
RIV7116_RS06860	COG5002	protein histidine kinase activity
RIV7116_RS06865	COG1361	Conserved repeat domain
RIV7116_RS06865	COG3266	domain, Protein
RIV7116_RS06865	COG2911	Protein conserved in bacteria
RIV7116_RS06880	COG4948	Mandelate Racemase Muconate Lactonizing
RIV7116_RS06890	COG1957	nucleoside hydrolase
RIV7116_RS06905	COG0402	S-adenosylhomocysteine deaminase activity
RIV7116_RS06910	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
RIV7116_RS06920	COG3621	Patatin-like phospholipase
RIV7116_RS06925	COG3842	ATPase activity
RIV7116_RS06935	COG1175	transmembrane transport
RIV7116_RS06940	COG1653	transport
RIV7116_RS06945	COG3447	MASE1 domain protein
RIV7116_RS06945	COG5002	protein histidine kinase activity
RIV7116_RS06945	COG5001	Diguanylate cyclase
RIV7116_RS06950	COG1539	Catalyzes the conversion of 7,8-dihydroneopterin to 6- hydroxymethyl-7,8-dihydropterin
RIV7116_RS06955	COG1165	Catalyzes the thiamine diphosphate-dependent decarboxylation of 2-oxoglutarate and the subsequent addition of the resulting succinic semialdehyde-thiamine pyrophosphate anion to isochorismate to yield 2-succinyl-5-enolpyruvyl-6-hydroxy-3- cyclohexene-1-carboxylate (SEPHCHC)
RIV7116_RS06960	COG0591	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
RIV7116_RS06975	COG0447	Converts o-succinylbenzoyl-CoA (OSB-CoA) to 1,4- dihydroxy-2-naphthoyl-CoA (DHNA-CoA)
RIV7116_RS06995	COG1842	Phage shock protein A
RIV7116_RS07000	COG1842	Phage shock protein A
RIV7116_RS07005	COG3118	belongs to the thioredoxin family
RIV7116_RS07010	COG0436	Aminotransferase
RIV7116_RS07020	COG0784	Response regulator, receiver
RIV7116_RS07030	COG0322	excinuclease ABC activity
RIV7116_RS07045	COG0002	Catalyzes the NADPH-dependent reduction of N-acetyl-5- glutamyl phosphate to yield N-acetyl-L-glutamate 5-semialdehyde
RIV7116_RS07075	COG0357	Ribosomal RNA small subunit methyltransferase G
RIV7116_RS07080	COG1135	Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system
RIV7116_RS07085	COG0745	RESPONSE REGULATOR receiver
RIV7116_RS07095	COG0278	Belongs to the glutaredoxin family. Monothiol subfamily
RIV7116_RS07100	COG0271	Belongs to the BolA IbaG family
RIV7116_RS07110	COG4935	Belongs to the peptidase S8 family
RIV7116_RS07110	COG1404	Belongs to the peptidase S8 family
RIV7116_RS07120	COG0590	tRNA wobble adenosine to inosine editing
RIV7116_RS07125	COG0695	Has a glutathione-disulfide oxidoreductase activity in the presence of NADPH and glutathione reductase. Reduces low molecular weight disulfides and proteins
RIV7116_RS07135	COG1494	fructose-1,6-bisphosphatase
RIV7116_RS07140	COG0373	Catalyzes the NADPH-dependent reduction of glutamyl- tRNA(Glu) to glutamate 1-semialdehyde (GSA)
RIV7116_RS07145	COG3128	pkhd-type hydroxylase
RIV7116_RS07160	COG1615	UPF0182 protein
RIV7116_RS07175	COG1115	amino acid carrier protein
RIV7116_RS07185	COG2124	cytochrome p450
RIV7116_RS07200	COG0166	Belongs to the GPI family
RIV7116_RS07260	COG0266	class I DNA-(apurinic or apyrimidinic site) endonuclease activity
RIV7116_RS07280	COG0472	First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan
RIV7116_RS07290	COG1490	D-aminoacyl-tRNA deacylase activity
RIV7116_RS07295	COG0523	cobalamin synthesis protein
RIV7116_RS07300	COG0215	cysteine-tRNA ligase activity
RIV7116_RS07305	COG0628	permease
RIV7116_RS07320	COG0515	serine threonine protein kinase
RIV7116_RS07330	COG0669	Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate
RIV7116_RS07335	COG0367	asparagine synthase
RIV7116_RS07375	COG0682	Transfers the N-acyl diglyceride group on what will become the N-terminal cysteine of membrane lipoproteins
RIV7116_RS07385	COG0426	domain, Protein
RIV7116_RS07385	COG1853	conserved protein domain typically associated with flavoprotein oxygenases, DIM6 NTAB family
RIV7116_RS07400	COG0820	rRNA (adenine-C2-)-methyltransferase activity
RIV7116_RS07415	COG4147	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
RIV7116_RS07420	COG1159	An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism
RIV7116_RS07430	COG0675	Transposase, IS605 OrfB family
RIV7116_RS07435	COG0424	maF-like protein
RIV7116_RS07450	COG5634	Uncharacterized conserved protein (DUF2278)
RIV7116_RS07455	COG2208	phosphoserine phosphatase activity
RIV7116_RS07460	COG0552	protein localization to endoplasmic reticulum
RIV7116_RS07465	COG0781	Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons
RIV7116_RS07480	COG0463	Glycosyl transferase, family 2
RIV7116_RS07500	COG1216	Glycosyl transferase, family 2
RIV7116_RS07525	COG0227	Belongs to the bacterial ribosomal protein bL28 family
RIV7116_RS07535	COG1216	Glycosyl transferase, family 2
RIV7116_RS07535	COG0463	Glycosyl transferase, family 2
RIV7116_RS07540	COG1216	Glycosyl transferase, family 2
RIV7116_RS07540	COG0463	Glycosyl transferase, family 2
RIV7116_RS07545	COG1216	Glycosyl transferase, family 2
RIV7116_RS07545	COG0463	Glycosyl transferase, family 2
RIV7116_RS07555	COG0542	response to heat
RIV7116_RS07560	COG3659	wide pore channel activity
RIV7116_RS07565	COG0148	phosphopyruvate hydratase activity
RIV7116_RS07570	COG0002	Catalyzes the NADPH-dependent reduction of N-acetyl-5- glutamyl phosphate to yield N-acetyl-L-glutamate 5-semialdehyde
RIV7116_RS07575	COG0108	Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate
RIV7116_RS07575	COG0807	Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate
RIV7116_RS07610	COG0646	methionine synthase
RIV7116_RS07610	COG1410	methionine synthase
RIV7116_RS07625	COG1073	alpha beta
RIV7116_RS07640	COG1985	Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
RIV7116_RS07640	COG0117	Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
RIV7116_RS07655	COG1077	Cell shape determining protein MreB Mrl
RIV7116_RS07660	COG0629	single-stranded DNA binding
RIV7116_RS07675	COG0860	N-Acetylmuramoyl-L-alanine amidase
RIV7116_RS07685	COG0860	N-Acetylmuramoyl-L-alanine amidase
RIV7116_RS07690	COG0796	Provides the (R)-glutamate required for cell wall biosynthesis
RIV7116_RS07695	COG0142	geranyltranstransferase activity
RIV7116_RS07715	COG1305	Transglutaminase-like
RIV7116_RS07720	COG2052	Domain of unknown function (DUF370)
RIV7116_RS07725	COG0194	GDP metabolic process
RIV7116_RS07740	COG0533	Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction
RIV7116_RS07745	COG2267	carboxylic ester hydrolase activity
RIV7116_RS07755	COG0454	-acetyltransferase
RIV7116_RS07770	COG2890	protein-(glutamine-N5) methyltransferase activity
RIV7116_RS07775	COG0009	L-threonylcarbamoyladenylate synthase
RIV7116_RS07780	COG0784	Response regulator, receiver
RIV7116_RS07780	COG5002	protein histidine kinase activity
RIV7116_RS07785	COG0454	-acetyltransferase
RIV7116_RS07795	COG0341	Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA
RIV7116_RS07800	COG0342	Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA
RIV7116_RS07805	COG0508	dehydrogenase complex catalyzes the overall conversion of
RIV7116_RS07805	COG0022	dehydrogenase e1 component
RIV7116_RS07815	COG0113	porphobilinogen synthase activity
RIV7116_RS07825	COG4108	Increases the formation of ribosomal termination complexes and stimulates activities of RF-1 and RF-2. It binds guanine nucleotides and has strong preference for UGA stop codons. It may interact directly with the ribosome. The stimulation of RF- 1 and RF-2 is significantly reduced by GTP and GDP, but not by GMP
RIV7116_RS07830	COG0501	Belongs to the peptidase M48B family
RIV7116_RS07840	COG0438	transferase activity, transferring glycosyl groups
RIV7116_RS07880	COG2226	methyltransferase
RIV7116_RS07885	COG4992	N2-acetyl-L-ornithine:2-oxoglutarate 5-aminotransferase activity
RIV7116_RS07905	COG0300	oxidoreductase activity
RIV7116_RS07910	COG0156	8-amino-7-oxononanoate synthase activity
RIV7116_RS07920	COG3320	Male sterility
RIV7116_RS07920	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
RIV7116_RS07925	COG2230	cyclopropane-fatty-acyl-phospholipid synthase
RIV7116_RS07930	COG2226	methyltransferase
RIV7116_RS07935	COG0318	PFAM AMP-dependent synthetase and ligase
RIV7116_RS07940	COG2814	Major facilitator Superfamily
RIV7116_RS07960	COG2319	Wd-40 repeat
RIV7116_RS07960	COG3903	Transcriptional regulator
RIV7116_RS08000	COG0119	Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate)
RIV7116_RS08005	COG0065	Catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate, via the formation of 2-isopropylmaleate
RIV7116_RS08010	COG0066	3-isopropylmalate dehydratase activity
RIV7116_RS08040	COG0512	Glutamine amidotransferase of anthranilate synthase
RIV7116_RS08040	COG0147	Part of a heterotetrameric complex that catalyzes the two-step biosynthesis of anthranilate, an intermediate in the biosynthesis of L-tryptophan. In the first step, the glutamine- binding beta subunit (TrpG) of anthranilate synthase (AS) provides the glutamine amidotransferase activity which generates ammonia as a substrate that, along with chorismate, is used in the second step, catalyzed by the large alpha subunit of AS (TrpE) to produce anthranilate. In the absence of TrpG, TrpE can synthesize anthranilate directly from chorismate and high concentrations of ammonia
RIV7116_RS08045	COG0134	indole-3-glycerol-phosphate synthase activity
RIV7116_RS08050	COG0159	tryptophan synthase activity
RIV7116_RS08055	COG0133	tryptophan synthase activity
RIV7116_RS08135	COG2831	hemolysin activation secretion protein
RIV7116_RS08150	COG5635	Nacht domain
RIV7116_RS08150	COG2319	Wd-40 repeat
RIV7116_RS08155	COG2319	Wd-40 repeat
RIV7116_RS08155	COG5635	Nacht domain
RIV7116_RS08325	COG0305	Participates in initiation and elongation during chromosome replication
RIV7116_RS08325	COG1372	Participates in initiation and elongation during chromosome replication
RIV7116_RS08395	COG0465	Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins
RIV7116_RS08475	COG2226	methyltransferase
RIV7116_RS08490	COG0745	RESPONSE REGULATOR receiver
RIV7116_RS08500	COG0789	Transcriptional regulator
RIV7116_RS08550	COG2217	Heavy metal translocating P-type atpase
RIV7116_RS08555	COG0640	Transcriptional regulator
RIV7116_RS08585	COG5002	protein histidine kinase activity
RIV7116_RS08615	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
RIV7116_RS08620	COG0394	Belongs to the low molecular weight phosphotyrosine protein phosphatase family
RIV7116_RS08625	COG0431	NADPH-dependent FMN reductase
RIV7116_RS08630	COG0798	PFAM Bile acid sodium symporter
RIV7116_RS08635	COG0226	Part of the ABC transporter complex PstSACB involved in phosphate import
RIV7116_RS08640	COG0640	Transcriptional regulator
RIV7116_RS08665	COG2132	Multicopper oxidase
RIV7116_RS08720	COG2217	Heavy metal translocating P-type atpase
RIV7116_RS08895	COG4585	Histidine kinase
RIV7116_RS09025	COG0582	viral genome integration into host DNA
RIV7116_RS09050	COG2207	Transcriptional regulator
RIV7116_RS09085	COG0547	Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'-phosphoribosyl)-anthranilate (PRA)
RIV7116_RS09090	COG0133	tryptophan synthase activity
RIV7116_RS09095	COG2304	oxidoreductase activity
RIV7116_RS09100	COG0159	tryptophan synthase activity
RIV7116_RS09105	COG0134	indole-3-glycerol-phosphate synthase activity
RIV7116_RS09115	COG0512	Glutamine amidotransferase of anthranilate synthase
RIV7116_RS09115	COG0147	Part of a heterotetrameric complex that catalyzes the two-step biosynthesis of anthranilate, an intermediate in the biosynthesis of L-tryptophan. In the first step, the glutamine- binding beta subunit (TrpG) of anthranilate synthase (AS) provides the glutamine amidotransferase activity which generates ammonia as a substrate that, along with chorismate, is used in the second step, catalyzed by the large alpha subunit of AS (TrpE) to produce anthranilate. In the absence of TrpG, TrpE can synthesize anthranilate directly from chorismate and high concentrations of ammonia
RIV7116_RS09130	COG0337	Catalyzes the conversion of 3-deoxy-D-arabino- heptulosonate 7-phosphate (DAHP) to dehydroquinate (DHQ)
RIV7116_RS09140	COG0287	Prephenate dehydrogenase
RIV7116_RS09140	COG1605	Chorismate mutase
RIV7116_RS09145	COG0297	glycogen (starch) synthase activity
RIV7116_RS09190	COG0028	Belongs to the TPP enzyme family
RIV7116_RS09200	COG0745	RESPONSE REGULATOR receiver
RIV7116_RS09235	COG1826	Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes
RIV7116_RS09240	COG0193	aminoacyl-tRNA hydrolase activity
RIV7116_RS09250	COG0828	Belongs to the bacterial ribosomal protein bS21 family
RIV7116_RS09255	COG0313	Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA
RIV7116_RS09260	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
RIV7116_RS09275	COG4336	lyase activity
RIV7116_RS09315	COG1211	2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase activity
RIV7116_RS09330	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
RIV7116_RS09365	COG0821	Converts 2C-methyl-D-erythritol 2,4-cyclodiphosphate (ME-2,4cPP) into 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate
RIV7116_RS09370	COG0793	Belongs to the peptidase S41A family
RIV7116_RS09385	COG0480	Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome
RIV7116_RS09415	COG1253	flavin adenine dinucleotide binding
RIV7116_RS09420	COG1197	Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site
RIV7116_RS09430	COG0505	Belongs to the CarA family
RIV7116_RS09450	COG1404	Belongs to the peptidase S8 family
RIV7116_RS09475	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
RIV7116_RS09480	COG4597	amino acid ABC transporter
RIV7116_RS09485	COG0765	amino acid transport
RIV7116_RS09490	COG1126	abc transporter atp-binding protein
RIV7116_RS09535	COG1696	Membrane protein involved in D-alanine export
RIV7116_RS09550	COG2352	Forms oxaloacetate, a four-carbon dicarboxylic acid source for the tricarboxylic acid cycle
RIV7116_RS09595	COG2204	response regulator
RIV7116_RS09605	COG3852	Histidine kinase
RIV7116_RS09610	COG0123	including yeast histone deacetylase and acetoin utilization protein
RIV7116_RS09615	COG0668	transmembrane transport
RIV7116_RS09620	COG1216	Glycosyl transferase, family 2
RIV7116_RS09635	COG2267	carboxylic ester hydrolase activity
RIV7116_RS09640	COG2321	neutral zinc metallopeptidase
RIV7116_RS09650	COG0178	The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 uvrA and 2 uvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by uvrB, the uvrA molecules dissociate
RIV7116_RS09670	COG0398	Pfam SNARE associated Golgi protein
RIV7116_RS09675	COG0170	dolichyl monophosphate biosynthetic process
RIV7116_RS09695	COG0596	Alpha beta hydrolase
RIV7116_RS09705	COG0419	ATPase involved in DNA repair
RIV7116_RS09720	COG0176	Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway
RIV7116_RS09730	COG0469	pyruvate kinase activity
RIV7116_RS09735	COG0057	glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity
RIV7116_RS09740	COG1052	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
RIV7116_RS09745	COG0058	SHG alpha-glucan phosphorylase activity
RIV7116_RS09750	COG3957	D-xylulose 5-phosphate D-fructose 6-phosphate phosphoketolase
RIV7116_RS09755	COG0806	An accessory protein needed during the final step in the assembly of 30S ribosomal subunit, possibly for assembly of the head region. Probably interacts with S19. Essential for efficient processing of 16S rRNA. May be needed both before and after RbfA during the maturation of 16S rRNA. It has affinity for free ribosomal 30S subunits but not for 70S ribosomes
RIV7116_RS09760	COG3977	Valine--pyruvate aminotransferase
RIV7116_RS09765	COG1062	S-(hydroxymethyl)glutathione dehydrogenase activity
RIV7116_RS09770	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
RIV7116_RS09780	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
RIV7116_RS09790	COG2091	lysine biosynthetic process via aminoadipic acid
RIV7116_RS09795	COG0429	hydrolase of the alpha beta-hydrolase fold
RIV7116_RS09800	COG0745	RESPONSE REGULATOR receiver
RIV7116_RS09845	COG2244	polysaccharide biosynthetic process
RIV7116_RS09850	COG1215	transferase activity, transferring glycosyl groups
RIV7116_RS09855	COG1215	transferase activity, transferring glycosyl groups
RIV7116_RS09865	COG1922	lipopolysaccharide N-acetylmannosaminouronosyltransferase activity
RIV7116_RS09885	COG2244	polysaccharide biosynthetic process
RIV7116_RS09890	COG1216	Glycosyl transferase, family 2
RIV7116_RS09890	COG0463	Glycosyl transferase, family 2
RIV7116_RS09910	COG0463	Glycosyl transferase, family 2
RIV7116_RS09910	COG1216	Glycosyl transferase, family 2
RIV7116_RS09935	COG0745	RESPONSE REGULATOR receiver
RIV7116_RS09965	COG0784	Response regulator, receiver
RIV7116_RS09965	COG2205	protein histidine kinase activity
RIV7116_RS09985	COG1028	Short-chain dehydrogenase reductase Sdr
RIV7116_RS10010	COG0156	8-amino-7-oxononanoate synthase activity
RIV7116_RS10045	COG1640	4-alpha-glucanotransferase
RIV7116_RS10050	COG3861	electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity
RIV7116_RS10055	COG3861	electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity
RIV7116_RS10065	COG1028	Short-chain dehydrogenase reductase Sdr
RIV7116_RS10255	COG0728	peptidoglycan biosynthetic process
RIV7116_RS10265	COG1316	TRANSCRIPTIONal
RIV7116_RS10275	COG0661	Is probably a protein kinase regulator of UbiI activity which is involved in aerobic coenzyme Q (ubiquinone) biosynthesis
RIV7116_RS10285	COG1131	(ABC) transporter
RIV7116_RS10320	COG0745	RESPONSE REGULATOR receiver
RIV7116_RS10330	COG2124	cytochrome p450
RIV7116_RS10335	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
RIV7116_RS10335	COG3349	Catalyzes the conversion of zeta-carotene to lycopene via the intermediary of neurosporene. It carries out two consecutive desaturations (introduction of double bonds) at positions C-7 and C-7'
RIV7116_RS10355	COG4603	Belongs to the binding-protein-dependent transport system permease family
RIV7116_RS10360	COG3845	ABC transporter
RIV7116_RS10365	COG1072	(Pantothenic acid kinase))
RIV7116_RS10370	COG0397	Uncharacterized ACR, YdiU/UPF0061 family
RIV7116_RS10380	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
RIV7116_RS10390	COG0502	Catalyzes the conversion of dethiobiotin (DTB) to biotin by the insertion of a sulfur atom into dethiobiotin via a radical- based mechanism
RIV7116_RS10400	COG0337	Catalyzes the conversion of 3-deoxy-D-arabino- heptulosonate 7-phosphate (DAHP) to dehydroquinate (DHQ)
RIV7116_RS10425	COG0399	UDP-4-amino-4-deoxy-L-arabinose aminotransferase
RIV7116_RS10435	COG2148	undecaprenyl-phosphate glucose phosphotransferase activity
RIV7116_RS10455	COG0438	transferase activity, transferring glycosyl groups
RIV7116_RS10455	COG0297	glycogen (starch) synthase activity
RIV7116_RS10465	COG0438	transferase activity, transferring glycosyl groups
RIV7116_RS10485	COG4683	PFAM Phage derived protein Gp49-like (DUF891)
RIV7116_RS10505	COG0489	protein tyrosine kinase activity
RIV7116_RS10530	COG1529	Aldehyde oxidase and xanthine dehydrogenase
RIV7116_RS10530	COG2080	2 iron, 2 sulfur cluster binding
RIV7116_RS10580	COG3209	COG3209 Rhs family protein
RIV7116_RS10595	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
RIV7116_RS10595	COG3320	Male sterility
RIV7116_RS10600	COG2070	2-Nitropropane dioxygenase
RIV7116_RS10600	COG0331	[acyl-carrier-protein] S-malonyltransferase activity
RIV7116_RS10610	COG1028	Short-chain dehydrogenase reductase Sdr
RIV7116_RS10610	COG4221	oxidoreductase activity
RIV7116_RS10610	COG3321	synthase
RIV7116_RS10610	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
RIV7116_RS10620	COG3321	synthase
RIV7116_RS10620	COG0604	alcohol dehydrogenase
RIV7116_RS10630	COG1475	DNA binding
RIV7116_RS10645	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
RIV7116_RS10670	COG0075	2-aminoethylphosphonate-pyruvate transaminase activity
RIV7116_RS10690	COG1252	NADH dehydrogenase
RIV7116_RS10695	COG5002	protein histidine kinase activity
RIV7116_RS10705	COG0277	FAD linked oxidase domain protein
RIV7116_RS10710	COG0247	lactate metabolic process
RIV7116_RS10760	COG3093	addiction module antidote protein HigA
RIV7116_RS10800	COG0386	Belongs to the glutathione peroxidase family
RIV7116_RS10830	COG0275	rRNA processing
RIV7116_RS10835	COG0583	DNA-binding transcription factor activity
RIV7116_RS10840	COG1225	Alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen
RIV7116_RS10845	COG2226	methyltransferase
RIV7116_RS10850	COG3659	wide pore channel activity
RIV7116_RS10860	COG1309	transcriptional regulator
RIV7116_RS10885	COG1206	Catalyzes the folate-dependent formation of 5-methyl- uridine at position 54 (M-5-U54) in all tRNAs
RIV7116_RS10910	COG0739	heme binding
RIV7116_RS10945	COG1108	ABC-type Mn2 Zn2 transport systems permease components
RIV7116_RS10950	COG1121	(ABC) transporter
RIV7116_RS10960	COG3659	wide pore channel activity
RIV7116_RS10965	COG0113	porphobilinogen synthase activity
RIV7116_RS10970	COG0302	gtp cyclohydrolase
RIV7116_RS10975	COG0523	cobalamin synthesis protein
RIV7116_RS10980	COG0215	cysteine-tRNA ligase activity
RIV7116_RS10985	COG0739	heme binding
RIV7116_RS11015	COG0523	cobalamin synthesis protein
RIV7116_RS11045	COG0441	Catalyzes the attachment of threonine to tRNA(Thr) in a two-step reaction L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr)
RIV7116_RS11060	COG0523	cobalamin synthesis protein
RIV7116_RS11065	COG1135	Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system
RIV7116_RS11070	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
RIV7116_RS11075	COG1253	flavin adenine dinucleotide binding
RIV7116_RS11090	COG0270	DNA (cytosine-5-)-methyltransferase activity
RIV7116_RS11095	COG0707	Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II)
RIV7116_RS11115	COG4191	Histidine kinase
RIV7116_RS11120	COG1366	Belongs to the anti-sigma-factor antagonist family
RIV7116_RS11125	COG0745	RESPONSE REGULATOR receiver
RIV7116_RS11150	COG0644	oxidoreductase
RIV7116_RS11160	COG1132	(ABC) transporter
RIV7116_RS11205	COG3210	domain, Protein
RIV7116_RS11235	COG2183	response to ionizing radiation
RIV7116_RS11240	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
RIV7116_RS11245	COG0633	Ferredoxin
RIV7116_RS11250	COG1950	PFAM Membrane protein of
RIV7116_RS11265	COG2010	Cytochrome c
RIV7116_RS11270	COG0489	protein tyrosine kinase activity
RIV7116_RS11280	COG0529	Catalyzes the synthesis of activated sulfate
RIV7116_RS11285	COG1132	(ABC) transporter
RIV7116_RS11310	COG0438	transferase activity, transferring glycosyl groups
RIV7116_RS11330	COG0463	Glycosyl transferase, family 2
RIV7116_RS11345	COG0312	modulator of DNA gyrase
RIV7116_RS11360	COG0701	Predicted permease
RIV7116_RS11390	COG0119	Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate)
RIV7116_RS11400	COG2022	thiamine diphosphate biosynthetic process
RIV7116_RS11400	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
RIV7116_RS11415	COG2084	Dehydrogenase
RIV7116_RS11430	COG0649	NAD binding
RIV7116_RS11440	COG0275	rRNA processing
RIV7116_RS11445	COG2201	protein-glutamate methylesterase activity
RIV7116_RS11460	COG4172	Belongs to the ABC transporter superfamily
RIV7116_RS11465	COG0629	single-stranded DNA binding
RIV7116_RS11475	COG3842	ATPase activity
RIV7116_RS11480	COG1208	COG1208 Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis translation initiation factor 2B, gamma epsilon subunits eIF-2Bgamma eIF-2Bepsilon
RIV7116_RS11505	COG1066	DNA-dependent ATPase involved in processing of recombination intermediates, plays a role in repairing DNA breaks. Stimulates the branch migration of RecA-mediated strand transfer reactions, allowing the 3' invading strand to extend heteroduplex DNA faster. Binds ssDNA in the presence of ADP but not other nucleotides, has ATPase activity that is stimulated by ssDNA and various branched DNA structures, but inhibited by SSB. Does not have RecA's homology-searching function
RIV7116_RS11545	COG0456	acetyltransferase
RIV7116_RS11610	COG1974	Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair
RIV7116_RS11615	COG0078	Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline
RIV7116_RS11635	COG3848	Pyruvate phosphate dikinase
RIV7116_RS11635	COG0574	Belongs to the PEP-utilizing enzyme family
RIV7116_RS11655	COG0302	gtp cyclohydrolase
RIV7116_RS11690	COG0438	transferase activity, transferring glycosyl groups
RIV7116_RS11700	COG1290	Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis
RIV7116_RS11710	COG0793	Belongs to the peptidase S41A family
RIV7116_RS11745	COG2211	Major facilitator Superfamily
RIV7116_RS11750	COG2236	Acts on guanine, xanthine and to a lesser extent hypoxanthine
RIV7116_RS11855	COG0107	imidazoleglycerol-phosphate synthase activity
RIV7116_RS11860	COG2255	four-way junction helicase activity
RIV7116_RS11915	COG0355	proton-transporting ATP synthase activity, rotational mechanism
RIV7116_RS11920	COG0055	Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits
RIV7116_RS11935	COG1132	(ABC) transporter
RIV7116_RS11940	COG0588	phosphoglycerate mutase activity
RIV7116_RS11960	COG0745	RESPONSE REGULATOR receiver
RIV7116_RS11965	COG5002	protein histidine kinase activity
RIV7116_RS11970	COG2912	Transglutaminase-like superfamily
RIV7116_RS11980	COG0668	transmembrane transport
RIV7116_RS11985	COG1160	GTP binding
RIV7116_RS11990	COG0149	triose-phosphate isomerase activity
RIV7116_RS11995	COG0294	Catalyzes the condensation of para-aminobenzoate (pABA) with 6-hydroxymethyl-7,8-dihydropterin diphosphate (DHPt-PP) to form 7,8-dihydropteroate (H2Pte), the immediate precursor of folate derivatives
RIV7116_RS12000	COG0330	HflC and HflK could
RIV7116_RS12010	COG1596	polysaccharide export
RIV7116_RS12015	COG1131	(ABC) transporter
RIV7116_RS12025	COG1680	COG1680 Beta-lactamase class C and other penicillin binding
RIV7116_RS12035	COG2319	Wd-40 repeat
RIV7116_RS12035	COG1672	PFAM Archaeal ATPase
RIV7116_RS12040	COG0131	Imidazoleglycerol-phosphate dehydratase
RIV7116_RS12045	COG3437	response regulator, receiver
RIV7116_RS12070	COG0623	enoyl-[acyl-carrier-protein] reductase (NADH) activity
RIV7116_RS12075	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
RIV7116_RS12080	COG4372	Transposase
RIV7116_RS12095	COG1185	polyribonucleotide nucleotidyltransferase activity
RIV7116_RS12105	COG0553	Transcription regulator that activates transcription by stimulating RNA polymerase (RNAP) recycling in case of stress conditions such as supercoiled DNA or high salt concentrations. Probably acts by releasing the RNAP, when it is trapped or immobilized on tightly supercoiled DNA. Does not activate transcription on linear DNA. Probably not involved in DNA repair
RIV7116_RS12110	COG4279	zinc finger
RIV7116_RS12140	COG0652	PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides
RIV7116_RS12145	COG0304	beta-ketoacyl-acyl-carrier-protein synthase II activity
RIV7116_RS12150	COG2211	Major facilitator Superfamily
RIV7116_RS12155	COG3670	oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen
RIV7116_RS12165	COG0635	Involved in the biosynthesis of porphyrin-containing compound
RIV7116_RS12170	COG5398	heme oxygenase
RIV7116_RS12185	COG1633	Catalyzes the formation of the isocyclic ring in chlorophyll biosynthesis. Mediates the cyclase reaction, which results in the formation of divinylprotochlorophyllide (Pchlide) characteristic of all chlorophylls from magnesium-protoporphyrin IX 13-monomethyl ester (MgPMME)
RIV7116_RS12190	COG2124	cytochrome p450
RIV7116_RS12195	COG0334	Belongs to the Glu Leu Phe Val dehydrogenases family
RIV7116_RS12225	COG0850	regulation of cytokinetic process
RIV7116_RS12230	COG2894	cell division
RIV7116_RS12235	COG0851	Prevents the cell division inhibition by proteins MinC and MinD at internal division sites while permitting inhibition at polar sites. This ensures cell division at the proper site by restricting the formation of a division septum at the midpoint of the long axis of the cell
RIV7116_RS12245	COG0223	Attaches a formyl group to the free amino group of methionyl-tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus
RIV7116_RS12265	COG0499	May play a key role in the regulation of the intracellular concentration of adenosylhomocysteine
RIV7116_RS12270	COG0668	transmembrane transport
RIV7116_RS12285	COG0297	glycogen (starch) synthase activity
RIV7116_RS12295	COG0540	Belongs to the ATCase OTCase family
RIV7116_RS12315	COG0517	IMP dehydrogenase activity
RIV7116_RS12315	COG0516	GMP reductase activity
RIV7116_RS12320	COG2239	Acts as a magnesium transporter
RIV7116_RS12345	COG0811	peptide transport
RIV7116_RS12350	COG0848	biopolymer transport protein
RIV7116_RS12375	COG0408	coproporphyrinogen oxidase activity
RIV7116_RS12385	COG0489	protein tyrosine kinase activity
RIV7116_RS12390	COG0772	Belongs to the SEDS family
RIV7116_RS12405	COG0475	glutathione-regulated potassium exporter activity
RIV7116_RS12405	COG0589	response to stress
RIV7116_RS12415	COG1004	Belongs to the UDP-glucose GDP-mannose dehydrogenase family
RIV7116_RS12430	COG1546	Belongs to the CinA family
RIV7116_RS12430	COG1058	Belongs to the CinA family
RIV7116_RS12435	COG0323	This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a molecular matchmaker , a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex
RIV7116_RS12450	COG0104	Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP
RIV7116_RS12455	COG1825	This is one of the proteins that binds to the 5S RNA in the ribosome where it forms part of the central protuberance
RIV7116_RS12495	COG0330	HflC and HflK could
RIV7116_RS12500	COG0735	belongs to the Fur family
RIV7116_RS12505	COG1828	Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL
RIV7116_RS12510	COG0047	phosphoribosylformylglycinamidine synthase activity
RIV7116_RS12515	COG4249	Peptidase C14 caspase catalytic subunit p20
RIV7116_RS12515	COG2319	Wd-40 repeat
RIV7116_RS12565	COG5002	protein histidine kinase activity
RIV7116_RS12570	COG0297	glycogen (starch) synthase activity
RIV7116_RS12585	COG0441	Catalyzes the attachment of threonine to tRNA(Thr) in a two-step reaction L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr)
RIV7116_RS12600	COG1008	NDH-1 shuttles electrons from NAD(P)H, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be plastoquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
RIV7116_RS12610	COG0083	homoserine kinase activity
RIV7116_RS12620	COG0465	Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins
RIV7116_RS12635	COG0438	transferase activity, transferring glycosyl groups
RIV7116_RS12650	COG0152	phosphoribosylaminoimidazolesuccinocarboxamide synthase activity
RIV7116_RS12655	COG4775	Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane
RIV7116_RS12660	COG0774	UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase activity
RIV7116_RS12665	COG0764	3-hydroxyoctanoyl-[acyl-carrier-protein] dehydratase activity
RIV7116_RS12670	COG1043	involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell
RIV7116_RS12675	COG0763	Condensation of UDP-2,3-diacylglucosamine and 2,3- diacylglucosamine-1-phosphate to form lipid A disaccharide, a precursor of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell
RIV7116_RS12680	COG0667	Aldo Keto reductase
RIV7116_RS12700	COG2603	Catalyzes the transfer of selenium from selenophosphate for conversion of 2-thiouridine to 2-selenouridine at the wobble position in tRNA
RIV7116_RS12705	COG1515	deoxyribonuclease V activity
RIV7116_RS12755	COG0087	One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit
RIV7116_RS12760	COG0088	Forms part of the polypeptide exit tunnel
RIV7116_RS12765	COG0089	rRNA binding
RIV7116_RS12770	COG0090	One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity
RIV7116_RS12775	COG0185	Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA
RIV7116_RS12780	COG0091	The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome
RIV7116_RS12785	COG0092	Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation
RIV7116_RS12790	COG0197	Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs
RIV7116_RS12795	COG0255	Belongs to the universal ribosomal protein uL29 family
RIV7116_RS12800	COG0186	One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA
RIV7116_RS12805	COG0093	Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome
RIV7116_RS12810	COG0198	One of the proteins that surrounds the polypeptide exit tunnel on the outside of the subunit
RIV7116_RS12815	COG0094	This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. In the 70S ribosome it contacts protein S13 of the 30S subunit (bridge B1b), connecting the 2 subunits
RIV7116_RS12820	COG0096	One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit
RIV7116_RS12825	COG0097	This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7 L12 stalk, and near the tRNA binding site of the peptidyltransferase center
RIV7116_RS12830	COG0256	This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance
RIV7116_RS12835	COG0098	Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body
RIV7116_RS12840	COG0200	Binds to the 23S rRNA
RIV7116_RS12845	COG0201	protein transport
RIV7116_RS12850	COG0563	adenylate kinase activity
RIV7116_RS12855	COG0361	One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre- initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initation complex
RIV7116_RS12860	COG0099	Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits
RIV7116_RS12865	COG0100	Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine-Dalgarno cleft in the 70S ribosome
RIV7116_RS12870	COG0202	RNA polymerase activity
RIV7116_RS12875	COG0203	ribosomal protein L17
RIV7116_RS12880	COG0101	tRNA pseudouridine synthase activity
RIV7116_RS12885	COG0102	This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly
RIV7116_RS12890	COG0103	maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
RIV7116_RS12895	COG0254	rRNA binding
RIV7116_RS12900	COG0216	Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA
RIV7116_RS12915	COG1476	TRANSCRIPTIONal
RIV7116_RS12920	COG0488	(ABC) transporter
RIV7116_RS12925	COG0696	Catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate
RIV7116_RS12945	COG1194	a g-specific adenine glycosylase
RIV7116_RS12950	COG0438	transferase activity, transferring glycosyl groups
RIV7116_RS12960	COG1381	Involved in DNA repair and RecF pathway recombination
RIV7116_RS12965	COG0274	Catalyzes a reversible aldol reaction between acetaldehyde and D-glyceraldehyde 3-phosphate to generate 2-deoxy- D-ribose 5-phosphate
RIV7116_RS13000	COG0799	negative regulation of ribosome biogenesis
RIV7116_RS13005	COG0297	glycogen (starch) synthase activity
RIV7116_RS13015	COG0602	queuosine metabolic process
RIV7116_RS13035	COG2710	Component of the dark-operative protochlorophyllide reductase (DPOR) that uses Mg-ATP and reduced ferredoxin to reduce ring D of protochlorophyllide (Pchlide) to form chlorophyllide a (Chlide). This reaction is light-independent. The NB-protein
RIV7116_RS13045	COG1348	The key enzymatic reactions in nitrogen fixation are catalyzed by the nitrogenase complex which has 2 components the iron protein and the molybdenum-iron protein
RIV7116_RS13055	COG0542	response to heat
RIV7116_RS13060	COG0515	serine threonine protein kinase
RIV7116_RS13060	COG1357	PFAM Pentapeptide repeats (8 copies)
RIV7116_RS13085	COG2081	HI0933 family
RIV7116_RS13100	COG3124	Converts holo-ACP to apo-ACP by hydrolytic cleavage of the phosphopantetheine prosthetic group from ACP
RIV7116_RS13115	COG0150	phosphoribosylformylglycinamidine cyclo-ligase activity
RIV7116_RS13135	COG0283	belongs to the cytidylate kinase family. Type 1 subfamily
RIV7116_RS13135	COG0414	Catalyzes the condensation of pantoate with beta-alanine in an ATP-dependent reaction via a pantoyl-adenylate intermediate
RIV7116_RS13140	COG0797	Lytic transglycosylase with a strong preference for naked glycan strands that lack stem peptides
RIV7116_RS13145	COG1649	PFAM Uncharacterised BCR, COG1649
RIV7116_RS13155	COG1972	Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family
RIV7116_RS13160	COG4191	Histidine kinase
RIV7116_RS13160	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
RIV7116_RS13165	COG3437	response regulator, receiver
RIV7116_RS13165	COG0784	Response regulator, receiver
RIV7116_RS13175	COG0402	S-adenosylhomocysteine deaminase activity
RIV7116_RS13200	COG2197	response regulator
RIV7116_RS13215	COG0784	Response regulator, receiver
RIV7116_RS13245	COG2261	transglycosylase associated protein
RIV7116_RS13270	COG3237	CsbD-like
RIV7116_RS13290	COG5002	protein histidine kinase activity
RIV7116_RS13295	COG5002	protein histidine kinase activity
RIV7116_RS13295	COG0784	Response regulator, receiver
RIV7116_RS13295	COG2198	Histidine kinase
RIV7116_RS13300	COG0784	Response regulator, receiver
RIV7116_RS13315	COG0589	response to stress
RIV7116_RS13325	COG0168	Low-affinity potassium transport system. Interacts with trk system potassium uptake protein TrkA
RIV7116_RS13330	COG3546	catalase activity
RIV7116_RS13335	COG1597	lipid kinase activity
RIV7116_RS13335	COG1803	Methylglyoxal synthase
RIV7116_RS13360	COG0007	Multifunctional enzyme that catalyzes the SAM-dependent methylations of uroporphyrinogen III at position C-2 and C-7 to form precorrin-2 via precorrin-1. Then it catalyzes the NAD- dependent ring dehydrogenation of precorrin-2 to yield sirohydrochlorin. Finally, it catalyzes the ferrochelation of sirohydrochlorin to yield siroheme
RIV7116_RS13380	COG1357	PFAM Pentapeptide repeats (8 copies)
RIV7116_RS13380	COG0515	serine threonine protein kinase
RIV7116_RS13400	COG0287	Prephenate dehydrogenase
RIV7116_RS13420	COG2876	3-deoxy-7-phosphoheptulonate synthase activity
RIV7116_RS13430	COG0184	Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome
RIV7116_RS13440	COG0288	reversible hydration of carbon dioxide
RIV7116_RS13460	COG0180	Tryptophanyl-tRNA synthetase
RIV7116_RS13485	COG1008	NDH-1 shuttles electrons from NAD(P)H, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be plastoquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
RIV7116_RS13490	COG1009	NADH ubiquinone oxidoreductase subunit 5 chain L Multisubunit Na H antiporter, MnhA subunit
RIV7116_RS13495	COG4577	Carbon dioxide concentrating mechanism carboxysome shell protein
RIV7116_RS13500	COG4577	Carbon dioxide concentrating mechanism carboxysome shell protein
RIV7116_RS13505	COG4576	ethanolamine utilization protein EutN carboxysome structural protein Ccml
RIV7116_RS13510	COG0663	COG0663 Carbonic anhydrases acetyltransferases, isoleucine patch superfamily
RIV7116_RS13510	COG4451	ribulose bisphosphate carboxylase, small
RIV7116_RS13515	COG0663	COG0663 Carbonic anhydrases acetyltransferases, isoleucine patch superfamily
RIV7116_RS13520	COG4577	Carbon dioxide concentrating mechanism carboxysome shell protein
RIV7116_RS13525	COG0583	DNA-binding transcription factor activity
RIV7116_RS13565	COG0465	Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins
RIV7116_RS13570	COG0793	Belongs to the peptidase S41A family
RIV7116_RS13590	COG1404	Belongs to the peptidase S8 family
RIV7116_RS13600	COG0448	Catalyzes the synthesis of ADP-glucose, a sugar donor used in elongation reactions on alpha-glucans
RIV7116_RS13605	COG0484	heat shock protein binding
RIV7116_RS13615	COG0450	alkyl hydroperoxide reductase
RIV7116_RS13635	COG0739	heme binding
RIV7116_RS13640	COG0219	Methylates the ribose at the nucleotide 34 wobble position in the two leucyl isoacceptors tRNA(Leu)(CmAA) and tRNA(Leu)(cmnm5UmAA). Catalyzes the methyl transfer from S- adenosyl-L-methionine to the 2'-OH of the wobble nucleotide
RIV7116_RS13645	COG2170	ATP-dependent carboxylate-amine ligase which exhibits weak glutamate--cysteine ligase activity
RIV7116_RS13650	COG2205	protein histidine kinase activity
RIV7116_RS13665	COG0014	Catalyzes the NADPH-dependent reduction of L-glutamate 5-phosphate into L-glutamate 5-semialdehyde and phosphate. The product spontaneously undergoes cyclization to form 1-pyrroline-5- carboxylate
RIV7116_RS13675	COG1064	alcohol dehydrogenase
RIV7116_RS13700	COG2205	protein histidine kinase activity
RIV7116_RS13700	COG0784	Response regulator, receiver
RIV7116_RS13705	COG0192	Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme
RIV7116_RS13710	COG0572	uridine kinase
RIV7116_RS13715	COG0369	Component of the sulfite reductase complex that catalyzes the 6-electron reduction of sulfite to sulfide. This is one of several activities required for the biosynthesis of L- cysteine from sulfate. The flavoprotein component catalyzes the electron flow from NADPH - FAD - FMN to the hemoprotein component
RIV7116_RS13720	COG0460	homoserine dehydrogenase
RIV7116_RS13725	COG2911	Protein conserved in bacteria
RIV7116_RS13725	COG1361	Conserved repeat domain
RIV7116_RS13725	COG3266	domain, Protein
RIV7116_RS13730	COG0008	Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu)
RIV7116_RS13760	COG2319	Wd-40 repeat
RIV7116_RS13760	COG4249	Peptidase C14 caspase catalytic subunit p20
RIV7116_RS13770	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
RIV7116_RS13780	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
RIV7116_RS13785	COG3670	oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen
RIV7116_RS13790	COG1022	Amp-dependent synthetase and ligase
RIV7116_RS13805	COG0508	dehydrogenase complex catalyzes the overall conversion of
RIV7116_RS13810	COG3621	Patatin-like phospholipase
RIV7116_RS13850	COG4262	Catalyzes the irreversible transfer of a propylamine group from the amino donor S-adenosylmethioninamine (decarboxy- AdoMet) to putrescine (1,4-diaminobutane) to yield spermidine
RIV7116_RS13880	COG0797	Lytic transglycosylase with a strong preference for naked glycan strands that lack stem peptides
RIV7116_RS13885	COG0668	transmembrane transport
RIV7116_RS13900	COG1690	Belongs to the RtcB family
RIV7116_RS13900	COG1690	Belongs to the RtcB family
RIV7116_RS13905	COG2226	methyltransferase
RIV7116_RS13910	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
RIV7116_RS13920	COG2226	methyltransferase
RIV7116_RS13925	COG2226	methyltransferase
RIV7116_RS13935	COG0789	Transcriptional regulator
RIV7116_RS13955	COG1598	PFAM Uncharacterised protein family UPF0150
RIV7116_RS14020	COG0446	pyridine nucleotide-disulphide oxidoreductase
RIV7116_RS14025	COG2319	Wd-40 repeat
RIV7116_RS14025	COG5635	Nacht domain
RIV7116_RS14025	COG5635	Nacht domain
RIV7116_RS14025	COG2319	Wd-40 repeat
RIV7116_RS14105	COG0745	RESPONSE REGULATOR receiver
RIV7116_RS14130	COG1372	Participates in initiation and elongation during chromosome replication
RIV7116_RS14130	COG0305	Participates in initiation and elongation during chromosome replication
RIV7116_RS14145	COG2197	response regulator
RIV7116_RS14150	COG4585	Histidine kinase
RIV7116_RS14190	COG1309	transcriptional regulator
RIV7116_RS14205	COG4453	Protein conserved in bacteria
RIV7116_RS14210	COG1554	hydrolase, family 65, central catalytic
RIV7116_RS14220	COG1045	serine acetyltransferase
RIV7116_RS14230	COG2226	methyltransferase
RIV7116_RS14240	COG0521	Mo-molybdopterin cofactor biosynthetic process
RIV7116_RS14280	COG0667	Aldo Keto reductase
RIV7116_RS14285	COG3659	wide pore channel activity
RIV7116_RS14375	COG0716	FMN binding
RIV7116_RS14380	COG3208	Thioesterase involved in non-ribosomal peptide biosynthesis
RIV7116_RS14385	COG1819	glycosyl
RIV7116_RS14385	COG1819	glycosyl
RIV7116_RS14390	COG2217	Heavy metal translocating P-type atpase
RIV7116_RS14400	COG1262	PFAM Formylglycine-generating sulfatase enzyme
RIV7116_RS14400	COG0515	serine threonine protein kinase
RIV7116_RS14425	COG2124	cytochrome p450
RIV7116_RS14430	COG0154	amidase activity
RIV7116_RS14440	COG2161	toxin-antitoxin pair type II binding
RIV7116_RS14450	COG2124	cytochrome p450
RIV7116_RS14455	COG1316	TRANSCRIPTIONal
RIV7116_RS14465	COG1309	transcriptional regulator
RIV7116_RS14470	COG1309	transcriptional regulator
RIV7116_RS14480	COG1181	Belongs to the D-alanine--D-alanine ligase family
RIV7116_RS14490	COG0154	amidase activity
RIV7116_RS14550	COG1108	ABC-type Mn2 Zn2 transport systems permease components
RIV7116_RS14555	COG1121	(ABC) transporter
RIV7116_RS14600	COG0745	RESPONSE REGULATOR receiver
RIV7116_RS14610	COG0589	response to stress
RIV7116_RS14625	COG0589	response to stress
RIV7116_RS14655	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
RIV7116_RS14675	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
RIV7116_RS14685	COG1136	(ABC) transporter
RIV7116_RS14690	COG3174	membrane
RIV7116_RS14725	COG0469	pyruvate kinase activity
RIV7116_RS14740	COG0589	response to stress
RIV7116_RS14745	COG0474	ATPase, P-type transporting, HAD superfamily, subfamily IC
RIV7116_RS14800	COG2831	hemolysin activation secretion protein
RIV7116_RS14830	COG2204	response regulator
RIV7116_RS14870	COG2986	histidine ammonia-lyase
RIV7116_RS14875	COG0318	PFAM AMP-dependent synthetase and ligase
RIV7116_RS14880	COG0028	Belongs to the TPP enzyme family
RIV7116_RS14885	COG0332	Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
RIV7116_RS14905	COG0287	Prephenate dehydrogenase
RIV7116_RS14905	COG1605	Chorismate mutase
RIV7116_RS14910	COG1132	(ABC) transporter
RIV7116_RS14915	COG1132	(ABC) transporter
RIV7116_RS14920	COG1136	(ABC) transporter
RIV7116_RS14925	COG0577	efflux transmembrane transporter activity
RIV7116_RS14925	COG1136	(ABC) transporter
RIV7116_RS14940	COG0282	Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction
RIV7116_RS14975	COG1361	Conserved repeat domain
RIV7116_RS14980	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
RIV7116_RS14990	COG2197	response regulator
RIV7116_RS14995	COG4585	Histidine kinase
RIV7116_RS15020	COG2138	Cobalamin (vitamin B12) biosynthesis CbiX protein
RIV7116_RS15035	COG1225	Alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen
RIV7116_RS15045	COG2326	polyphosphate kinase activity
RIV7116_RS15075	COG1985	Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
RIV7116_RS15080	COG0784	Response regulator, receiver
RIV7116_RS15080	COG2205	protein histidine kinase activity
RIV7116_RS15090	COG0571	ribonuclease III activity
RIV7116_RS15100	COG0598	Magnesium transport protein CorA
RIV7116_RS15110	COG4585	Histidine kinase
RIV7116_RS15120	COG2897	thiosulfate sulfurtransferase activity
RIV7116_RS15125	COG2197	response regulator
RIV7116_RS15130	COG0459	protein refolding
RIV7116_RS15135	COG0472	First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan
RIV7116_RS15150	COG3236	hydrolase activity, hydrolyzing N-glycosyl compounds
RIV7116_RS15185	COG1087	Belongs to the NAD(P)-dependent epimerase dehydratase family
RIV7116_RS15195	COG1132	(ABC) transporter
RIV7116_RS15200	COG2148	undecaprenyl-phosphate glucose phosphotransferase activity
RIV7116_RS15210	COG0496	Nucleotidase that shows phosphatase activity on nucleoside 5'-monophosphates
RIV7116_RS15215	COG3631	Ketosteroid isomerase-related protein
RIV7116_RS15235	COG0591	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
RIV7116_RS15240	COG2371	Involved in urease metallocenter assembly. Binds nickel. Probably functions as a nickel donor during metallocenter assembly
RIV7116_RS15245	COG0830	nickel cation binding
RIV7116_RS15250	COG0378	Facilitates the functional incorporation of the urease nickel metallocenter. This process requires GTP hydrolysis, probably effectuated by UreG
RIV7116_RS15270	COG0730	response to heat
RIV7116_RS15290	COG1807	4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family
RIV7116_RS15295	COG2205	protein histidine kinase activity
RIV7116_RS15305	COG4251	negative regulation of phosphorylation
RIV7116_RS15310	COG0467	Core component of the KaiABC clock protein complex, which constitutes the main circadian regulator in cyanobacteria. Binds to DNA. The KaiABC complex may act as a promoter-nonspecific transcription regulator that represses transcription, possibly by acting on the state of chromosome compaction
RIV7116_RS15335	COG1598	PFAM Uncharacterised protein family UPF0150
RIV7116_RS15360	COG1429	ligase activity, forming nitrogen-metal bonds
RIV7116_RS15390	COG0483	inositol monophosphate 1-phosphatase activity
RIV7116_RS15410	COG0465	Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins
RIV7116_RS15415	COG0431	NADPH-dependent FMN reductase
RIV7116_RS15425	COG0006	proline dipeptidase activity
RIV7116_RS15430	COG2755	lipolytic protein G-D-S-L family
RIV7116_RS15430	COG1835	transferase activity, transferring acyl groups other than amino-acyl groups
RIV7116_RS15470	COG0628	permease
RIV7116_RS15500	COG0534	Mate efflux family protein
RIV7116_RS15520	COG1192	Involved in chromosome partitioning
RIV7116_RS15570	COG5002	protein histidine kinase activity
RIV7116_RS15575	COG0745	RESPONSE REGULATOR receiver
RIV7116_RS15600	COG0169	Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA)
RIV7116_RS15605	COG0659	secondary active sulfate transmembrane transporter activity
RIV7116_RS15610	COG0475	glutathione-regulated potassium exporter activity
RIV7116_RS15615	COG0475	glutathione-regulated potassium exporter activity
RIV7116_RS15615	COG0589	response to stress
RIV7116_RS15630	COG0347	Belongs to the P(II) protein family
RIV7116_RS15635	COG2303	Involved in the biosynthesis of the osmoprotectant glycine betaine. Catalyzes the oxidation of choline to betaine aldehyde and betaine aldehyde to glycine betaine at the same rate
RIV7116_RS15640	COG1845	cytochrome c oxidase, subunit III
RIV7116_RS15650	COG1622	oxidoreductase activity, acting on a heme group of donors, oxygen as acceptor
RIV7116_RS15665	COG0860	N-Acetylmuramoyl-L-alanine amidase
RIV7116_RS15680	COG1845	cytochrome c oxidase, subunit III
RIV7116_RS15685	COG0843	Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1- 3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B
RIV7116_RS15690	COG1622	oxidoreductase activity, acting on a heme group of donors, oxygen as acceptor
RIV7116_RS15725	COG0023	Translation Initiation Factor
RIV7116_RS15790	COG1364	Catalyzes two activities which are involved in the cyclic version of arginine biosynthesis the synthesis of N- acetylglutamate from glutamate and acetyl-CoA as the acetyl donor, and of ornithine by transacetylation between N(2)-acetylornithine and glutamate
RIV7116_RS15795	COG0064	Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln)
RIV7116_RS15810	COG0272	DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA
RIV7116_RS15830	COG0306	phosphate transporter
RIV7116_RS15835	COG1063	alcohol dehydrogenase
RIV7116_RS15845	COG2319	Wd-40 repeat
RIV7116_RS15845	COG4249	Peptidase C14 caspase catalytic subunit p20
RIV7116_RS15855	COG1053	succinate dehydrogenase
RIV7116_RS15855	COG3976	FMN-binding domain protein
RIV7116_RS15855	COG0431	NADPH-dependent FMN reductase
RIV7116_RS15865	COG2226	methyltransferase
RIV7116_RS15885	COG1189	Ribosomal RNA methyltransferase RrmJ FtsJ
RIV7116_RS15910	COG3386	PFAM SMP-30 Gluconolaconase
RIV7116_RS15920	COG3000	fatty acid hydroxylase
RIV7116_RS15920	COG0300	oxidoreductase activity
RIV7116_RS15925	COG0188	A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner
RIV7116_RS15960	COG0484	heat shock protein binding
RIV7116_RS15965	COG0740	serine-type endopeptidase activity
RIV7116_RS15970	COG0740	serine-type endopeptidase activity
RIV7116_RS15975	COG2304	oxidoreductase activity
RIV7116_RS15980	COG0346	lactoylglutathione lyase activity
RIV7116_RS16005	COG4956	integral membrane protein (PIN domain superfamily)
RIV7116_RS16010	COG0635	Involved in the biosynthesis of porphyrin-containing compound
RIV7116_RS16020	COG0589	response to stress
RIV7116_RS16025	COG0126	phosphoglycerate kinase activity
RIV7116_RS16030	COG1051	belongs to the nudix hydrolase family
RIV7116_RS16045	COG1586	Catalyzes the decarboxylation of S-adenosylmethionine to S-adenosylmethioninamine (dcAdoMet), the propylamine donor required for the synthesis of the polyamines spermine and spermidine from the diamine putrescine
RIV7116_RS16050	COG1357	PFAM Pentapeptide repeats (8 copies)
RIV7116_RS16050	COG0515	serine threonine protein kinase
RIV7116_RS16055	COG0515	serine threonine protein kinase
RIV7116_RS16055	COG3266	domain, Protein
RIV7116_RS16065	COG2335	COG2335, Secreted and surface protein containing fasciclin-like repeats
RIV7116_RS16080	COG0568	sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released
RIV7116_RS16095	COG1216	Glycosyl transferase, family 2
RIV7116_RS16100	COG0724	RNA recognition motif
RIV7116_RS16110	COG2197	response regulator
RIV7116_RS16130	COG0847	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'-5' exonuclease
RIV7116_RS16145	COG0768	penicillin binding
RIV7116_RS16160	COG0296	Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position
RIV7116_RS16180	COG0520	Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L- selenocystine to produce L-alanine
RIV7116_RS16195	COG0515	serine threonine protein kinase
RIV7116_RS16205	COG0008	Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu)
RIV7116_RS16215	COG0465	Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins
RIV7116_RS16255	COG1902	pentaerythritol trinitrate reductase activity
RIV7116_RS16270	COG1136	(ABC) transporter
RIV7116_RS16275	COG0577	efflux transmembrane transporter activity
RIV7116_RS16275	COG1136	(ABC) transporter
RIV7116_RS16280	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
RIV7116_RS16295	COG0745	RESPONSE REGULATOR receiver
RIV7116_RS16300	COG5002	protein histidine kinase activity
RIV7116_RS16320	COG2304	oxidoreductase activity
RIV7116_RS16325	COG2226	methyltransferase
RIV7116_RS16330	COG0771	Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA)
RIV7116_RS16335	COG0751	glycine-tRNA ligase activity
RIV7116_RS16355	COG0262	Key enzyme in folate metabolism. Catalyzes an essential reaction for de novo glycine and purine synthesis, and for DNA precursor synthesis
RIV7116_RS16365	COG0300	oxidoreductase activity
RIV7116_RS16375	COG0784	Response regulator, receiver
RIV7116_RS16380	COG4251	negative regulation of phosphorylation
RIV7116_RS16385	COG0784	Response regulator, receiver
RIV7116_RS16385	COG2205	protein histidine kinase activity
RIV7116_RS16385	COG5002	protein histidine kinase activity
RIV7116_RS16390	COG0586	Pfam SNARE associated Golgi protein
RIV7116_RS16420	COG0674	pyruvate-flavodoxin oxidoreductase activity
RIV7116_RS16420	COG1013	pyruvate-flavodoxin oxidoreductase activity
RIV7116_RS16420	COG1014	Oxidoreductase required for the transfer of electrons from pyruvate to flavodoxin
RIV7116_RS16420	COG1146	Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions
RIV7116_RS16425	COG0668	transmembrane transport
RIV7116_RS16435	COG0300	oxidoreductase activity
RIV7116_RS16460	COG2852	Protein conserved in bacteria
RIV7116_RS16470	COG0554	Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate
RIV7116_RS16475	COG2217	Heavy metal translocating P-type atpase
RIV7116_RS16485	COG0426	domain, Protein
RIV7116_RS16485	COG1853	conserved protein domain typically associated with flavoprotein oxygenases, DIM6 NTAB family
RIV7116_RS16490	COG1853	conserved protein domain typically associated with flavoprotein oxygenases, DIM6 NTAB family
RIV7116_RS16490	COG0426	domain, Protein
RIV7116_RS16500	COG0587	DNA-directed DNA polymerase activity
RIV7116_RS16565	COG0317	In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance
RIV7116_RS16575	COG3454	Phosphonate metabolism
RIV7116_RS16605	COG0772	Belongs to the SEDS family
RIV7116_RS16620	COG1333	cytochrome c biogenesis protein
RIV7116_RS16630	COG0780	Catalyzes the NADPH-dependent reduction of 7-cyano-7- deazaguanine (preQ0) to 7-aminomethyl-7-deazaguanine (preQ1)
RIV7116_RS16665	COG3409	Peptidoglycan-binding domain 1 protein
RIV7116_RS16665	COG0860	N-Acetylmuramoyl-L-alanine amidase
RIV7116_RS16750	COG2746	aminoglycoside 3-N-acetyltransferase activity
RIV7116_RS16760	COG4451	ribulose bisphosphate carboxylase, small
RIV7116_RS16770	COG1850	ribulose-bisphosphate carboxylase activity
RIV7116_RS16780	COG0413	3-methyl-2-oxobutanoate hydroxymethyltransferase activity
RIV7116_RS16785	COG0111	D-isomer specific 2-hydroxyacid dehydrogenase
RIV7116_RS16790	COG2264	protein methyltransferase activity
RIV7116_RS16800	COG3118	belongs to the thioredoxin family
RIV7116_RS16805	COG1028	Short-chain dehydrogenase reductase Sdr
RIV7116_RS16835	COG1523	belongs to the glycosyl hydrolase 13 family
RIV7116_RS16870	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
RIV7116_RS16885	COG1215	transferase activity, transferring glycosyl groups
RIV7116_RS16890	COG1045	serine acetyltransferase
RIV7116_RS16895	COG3206	protein involved in exopolysaccharide biosynthesis
RIV7116_RS16895	COG0489	protein tyrosine kinase activity
RIV7116_RS16950	COG1554	hydrolase, family 65, central catalytic
RIV7116_RS16955	COG3659	wide pore channel activity
RIV7116_RS16960	COG1003	The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor
RIV7116_RS16960	COG0403	The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor
RIV7116_RS16965	COG0509	glycine decarboxylation via glycine cleavage system
RIV7116_RS16970	COG0404	The glycine cleavage system catalyzes the degradation of glycine
RIV7116_RS16990	COG0768	penicillin binding
RIV7116_RS16995	COG3842	ATPase activity
RIV7116_RS17000	COG0687	Required for the activity of the bacterial periplasmic transport system of putrescine
RIV7116_RS17005	COG1176	ABC-type spermidine putrescine transport system, permease component I
RIV7116_RS17010	COG0438	transferase activity, transferring glycosyl groups
RIV7116_RS17030	COG2010	Cytochrome c
RIV7116_RS17045	COG0770	UDP-N-acetylmuramoyl-tripeptide-D-alanyl-D-alanine ligase activity
RIV7116_RS17065	COG1226	(belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family)
RIV7116_RS17075	COG0494	nUDIX hydrolase
RIV7116_RS17080	COG0801	2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase
RIV7116_RS17085	COG5009	serine-type D-Ala-D-Ala carboxypeptidase activity
RIV7116_RS17105	COG0144	Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA
RIV7116_RS17105	COG0781	Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons
RIV7116_RS17125	COG1035	Coenzyme F420 hydrogenase/dehydrogenase, beta subunit C terminus
RIV7116_RS17130	COG0515	serine threonine protein kinase
RIV7116_RS17130	COG1357	PFAM Pentapeptide repeats (8 copies)
RIV7116_RS17150	COG0276	Catalyzes the ferrous insertion into protoporphyrin IX
RIV7116_RS17155	COG1136	(ABC) transporter
RIV7116_RS17155	COG0577	efflux transmembrane transporter activity
RIV7116_RS17190	COG0237	dephospho-CoA kinase activity
RIV7116_RS17200	COG0448	Catalyzes the synthesis of ADP-glucose, a sugar donor used in elongation reactions on alpha-glucans
RIV7116_RS17205	COG1413	lyase activity
RIV7116_RS17210	COG1413	lyase activity
RIV7116_RS17215	COG0369	Component of the sulfite reductase complex that catalyzes the 6-electron reduction of sulfite to sulfide. This is one of several activities required for the biosynthesis of L- cysteine from sulfate. The flavoprotein component catalyzes the electron flow from NADPH - FAD - FMN to the hemoprotein component
RIV7116_RS17235	COG1413	lyase activity
RIV7116_RS17245	COG0237	dephospho-CoA kinase activity
RIV7116_RS17260	COG0564	pseudouridine synthase activity
RIV7116_RS17290	COG0784	Response regulator, receiver
RIV7116_RS17295	COG2205	protein histidine kinase activity
RIV7116_RS17295	COG0745	RESPONSE REGULATOR receiver
RIV7116_RS17295	COG3292	Two component regulator propeller
RIV7116_RS17305	COG0840	transmembrane signaling receptor activity
RIV7116_RS17305	COG2203	Gaf domain
RIV7116_RS17310	COG2198	Histidine kinase
RIV7116_RS17310	COG0784	Response regulator, receiver
RIV7116_RS17310	COG0643	Histidine kinase
RIV7116_RS17330	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
RIV7116_RS17335	COG0151	Belongs to the GarS family
RIV7116_RS17340	COG5002	protein histidine kinase activity
RIV7116_RS17345	COG0123	including yeast histone deacetylase and acetoin utilization protein
RIV7116_RS17395	COG0498	Catalyzes the gamma-elimination of phosphate from L- phosphohomoserine and the beta-addition of water to produce L- threonine
RIV7116_RS17400	COG1977	Involved in sulfur transfer in the conversion of molybdopterin precursor Z to molybdopterin
RIV7116_RS17405	COG3659	wide pore channel activity
RIV7116_RS17425	COG1633	Catalyzes the formation of the isocyclic ring in chlorophyll biosynthesis. Mediates the cyclase reaction, which results in the formation of divinylprotochlorophyllide (Pchlide) characteristic of all chlorophylls from magnesium-protoporphyrin IX 13-monomethyl ester (MgPMME)
RIV7116_RS17445	COG0035	Catalyzes the conversion of uracil and 5-phospho-alpha- D-ribose 1-diphosphate (PRPP) to UMP and diphosphate
RIV7116_RS17495	COG2821	murein-degrading enzyme. may play a role in recycling of muropeptides during cell elongation and or cell division
RIV7116_RS17500	COG1044	Catalyzes the N-acylation of UDP-3-O-acylglucosamine using 3-hydroxyacyl-ACP as the acyl donor. Is involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell
RIV7116_RS17510	COG2048	Heterodisulfide reductase, subunit B
RIV7116_RS17515	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
RIV7116_RS17520	COG0304	beta-ketoacyl-acyl-carrier-protein synthase II activity
RIV7116_RS17525	COG0021	Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate
RIV7116_RS17575	COG0605	Destroys radicals which are normally produced within the cells and which are toxic to biological systems
RIV7116_RS17580	COG0517	IMP dehydrogenase activity
RIV7116_RS17580	COG0617	tRNA 3'-terminal CCA addition
RIV7116_RS17580	COG0618	3'(2'),5'-bisphosphate nucleotidase activity
RIV7116_RS17590	COG1247	-acetyltransferase
RIV7116_RS17595	COG1028	Short-chain dehydrogenase reductase Sdr
RIV7116_RS17615	COG0317	In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance
RIV7116_RS17635	COG0315	cyclic pyranopterin monophosphate synthase activity
RIV7116_RS17670	COG0366	Alpha amylase catalytic
RIV7116_RS17690	COG0237	dephospho-CoA kinase activity
RIV7116_RS17690	COG0448	Catalyzes the synthesis of ADP-glucose, a sugar donor used in elongation reactions on alpha-glucans
RIV7116_RS17695	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
RIV7116_RS17720	COG2211	Major facilitator Superfamily
RIV7116_RS17735	COG2205	protein histidine kinase activity
RIV7116_RS17740	COG2227	3-demethylubiquinone-9 3-O-methyltransferase activity
RIV7116_RS17750	COG0356	it plays a direct role in the translocation of protons across the membrane
RIV7116_RS17755	COG0636	F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation
RIV7116_RS17760	COG0711	Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0)
RIV7116_RS17765	COG0711	Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0)
RIV7116_RS17770	COG0712	F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation
RIV7116_RS17775	COG0056	Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit
RIV7116_RS17780	COG0224	Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex
RIV7116_RS17795	COG0349	Exonuclease involved in the 3' processing of various precursor tRNAs. Initiates hydrolysis at the 3'-terminus of an RNA molecule and releases 5'-mononucleotides
RIV7116_RS17825	COG0515	serine threonine protein kinase
RIV7116_RS17825	COG1357	PFAM Pentapeptide repeats (8 copies)
RIV7116_RS17830	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
RIV7116_RS17850	COG0697	spore germination
RIV7116_RS17865	COG0522	One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit
RIV7116_RS17885	COG2124	cytochrome p450
RIV7116_RS17895	COG3903	Transcriptional regulator
RIV7116_RS17895	COG2319	Wd-40 repeat
RIV7116_RS17935	COG0226	Part of the ABC transporter complex PstSACB involved in phosphate import
RIV7116_RS17960	COG1132	(ABC) transporter
RIV7116_RS17975	COG0488	(ABC) transporter
RIV7116_RS17985	COG0607	Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
RIV7116_RS17995	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
RIV7116_RS18015	COG0310	cobalt ion transport
RIV7116_RS18020	COG1930	Part of the energy-coupling factor (ECF) transporter complex CbiMNOQ involved in cobalt import
RIV7116_RS18030	COG1122	ATPase activity
RIV7116_RS18040	COG0027	Involved in the de novo purine biosynthesis. Catalyzes the transfer of formate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR). Formate is provided by PurU via hydrolysis of 10-formyl-tetrahydrofolate
RIV7116_RS18065	COG1207	Catalyzes the last two sequential reactions in the de novo biosynthetic pathway for UDP-N-acetylglucosamine (UDP- GlcNAc). The C-terminal domain catalyzes the transfer of acetyl group from acetyl coenzyme A to glucosamine-1-phosphate (GlcN-1-P) to produce N-acetylglucosamine-1-phosphate (GlcNAc-1-P), which is converted into UDP-GlcNAc by the transfer of uridine 5- monophosphate (from uridine 5-triphosphate), a reaction catalyzed by the N-terminal domain
RIV7116_RS18075	COG0463	Glycosyl transferase, family 2
RIV7116_RS18085	COG0463	Glycosyl transferase, family 2
RIV7116_RS18135	COG0448	Catalyzes the synthesis of ADP-glucose, a sugar donor used in elongation reactions on alpha-glucans
RIV7116_RS18140	COG2971	BadF BadG BcrA BcrD
RIV7116_RS18155	COG1070	Carbohydrate kinase
RIV7116_RS18180	COG0625	glutathione transferase activity
RIV7116_RS18185	COG1666	GTP binding
RIV7116_RS18215	COG0857	belongs to the CobB CobQ family
RIV7116_RS18225	COG1215	transferase activity, transferring glycosyl groups
RIV7116_RS18230	COG2812	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity
RIV7116_RS18250	COG3639	organic phosphonate transmembrane transporter activity
RIV7116_RS18255	COG3221	ABC-type phosphate phosphonate transport system periplasmic component
RIV7116_RS18260	COG3638	Part of the ABC transporter complex PhnCDE involved in phosphonates import. Responsible for energy coupling to the transport system
RIV7116_RS18265	COG2814	Major facilitator Superfamily
RIV7116_RS18270	COG0525	valine-tRNA ligase activity
RIV7116_RS18280	COG0661	Is probably a protein kinase regulator of UbiI activity which is involved in aerobic coenzyme Q (ubiquinone) biosynthesis
RIV7116_RS18285	COG0497	DNA recombination
RIV7116_RS18330	COG0395	ABC-type sugar transport system, permease component
RIV7116_RS18335	COG1633	Catalyzes the formation of the isocyclic ring in chlorophyll biosynthesis. Mediates the cyclase reaction, which results in the formation of divinylprotochlorophyllide (Pchlide) characteristic of all chlorophylls from magnesium-protoporphyrin IX 13-monomethyl ester (MgPMME)
RIV7116_RS18340	COG5322	oxidoreductase activity
RIV7116_RS18345	COG0825	malonyl-CoA metabolic process
RIV7116_RS18350	COG4221	oxidoreductase activity
RIV7116_RS18355	COG0302	gtp cyclohydrolase
RIV7116_RS18360	COG0135	phosphoribosylanthranilate isomerase activity
RIV7116_RS18370	COG1994	Peptidase M50
RIV7116_RS18370	COG0517	IMP dehydrogenase activity
RIV7116_RS18380	COG1903	Catalyzes the methylation of C-1 in cobalt-precorrin-5B to form cobalt-precorrin-6A
RIV7116_RS18390	COG0071	Belongs to the small heat shock protein (HSP20) family
RIV7116_RS18425	COG1226	(belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family)
RIV7116_RS18430	COG1226	(belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family)
RIV7116_RS18450	COG0515	serine threonine protein kinase
RIV7116_RS18455	COG0515	serine threonine protein kinase
RIV7116_RS18455	COG2815	serine threonine protein kinase
RIV7116_RS18460	COG0095	Lipoate-protein ligase
RIV7116_RS18470	COG1357	PFAM Pentapeptide repeats (8 copies)
RIV7116_RS18470	COG0515	serine threonine protein kinase
RIV7116_RS18475	COG1357	PFAM Pentapeptide repeats (8 copies)
RIV7116_RS18475	COG0515	serine threonine protein kinase
RIV7116_RS18480	COG1357	PFAM Pentapeptide repeats (8 copies)
RIV7116_RS18480	COG0515	serine threonine protein kinase
RIV7116_RS18500	COG2203	Gaf domain
RIV7116_RS18535	COG2226	methyltransferase
RIV7116_RS18535	COG1073	alpha beta
RIV7116_RS18555	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
RIV7116_RS18585	COG1215	transferase activity, transferring glycosyl groups
RIV7116_RS18590	COG0438	transferase activity, transferring glycosyl groups
RIV7116_RS18595	COG1045	serine acetyltransferase
RIV7116_RS18600	COG0489	protein tyrosine kinase activity
RIV7116_RS18605	COG1922	lipopolysaccharide N-acetylmannosaminouronosyltransferase activity
RIV7116_RS18615	COG0504	CTP synthase activity
RIV7116_RS18625	COG1940	carbohydrate kinase activity
RIV7116_RS18635	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
RIV7116_RS18640	COG0492	ferredoxin-NADP+ reductase activity
RIV7116_RS18650	COG2227	3-demethylubiquinone-9 3-O-methyltransferase activity
RIV7116_RS18655	COG4968	Prepilin-type N-terminal cleavage methylation domain
RIV7116_RS18680	COG1357	PFAM Pentapeptide repeats (8 copies)
RIV7116_RS18680	COG0515	serine threonine protein kinase
RIV7116_RS18690	COG5001	Diguanylate cyclase
RIV7116_RS18695	COG1187	pseudouridine synthase activity
RIV7116_RS18700	COG0422	Catalyzes the synthesis of the hydroxymethylpyrimidine phosphate (HMP-P) moiety of thiamine from aminoimidazole ribotide (AIR) in a radical S-adenosyl-L-methionine (SAM)-dependent reaction
RIV7116_RS18705	COG0461	Catalyzes the transfer of a ribosyl phosphate group from 5-phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP)
RIV7116_RS18725	COG1253	flavin adenine dinucleotide binding
RIV7116_RS18730	COG0603	Catalyzes the ATP-dependent conversion of 7-carboxy-7- deazaguanine (CDG) to 7-cyano-7-deazaguanine (preQ(0))
RIV7116_RS18735	COG0673	inositol 2-dehydrogenase activity
RIV7116_RS18750	COG1109	Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
RIV7116_RS18755	COG0127	Pyrophosphatase that catalyzes the hydrolysis of nucleoside triphosphates to their monophosphate derivatives, with a high preference for the non-canonical purine nucleotides XTP (xanthosine triphosphate), dITP (deoxyinosine triphosphate) and ITP. Seems to function as a house-cleaning enzyme that removes non-canonical purine nucleotides from the nucleotide pool, thus preventing their incorporation into DNA RNA and avoiding chromosomal lesions
RIV7116_RS18770	COG0351	phosphomethylpyrimidine kinase
RIV7116_RS18780	COG1404	Belongs to the peptidase S8 family
RIV7116_RS18810	COG2949	membrane
RIV7116_RS18815	COG3442	glutamine amidotransferase
RIV7116_RS18825	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
RIV7116_RS18840	COG4301	Catalyzes the SAM-dependent triple methylation of the alpha-amino group of histidine to form hercynine, a step in the biosynthesis pathway of ergothioneine
RIV7116_RS18845	COG1262	PFAM Formylglycine-generating sulfatase enzyme
RIV7116_RS18850	COG0121	glutamine amidotransferase
RIV7116_RS18855	COG2363	Small membrane protein
RIV7116_RS18870	COG2227	3-demethylubiquinone-9 3-O-methyltransferase activity
RIV7116_RS18880	COG0041	Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR)
RIV7116_RS18885	COG0004	ammonium transporteR
RIV7116_RS18895	COG2815	serine threonine protein kinase
RIV7116_RS18895	COG0515	serine threonine protein kinase
RIV7116_RS18910	COG0004	ammonium transporteR
RIV7116_RS18920	COG0761	Catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)- butenyl 4-diphosphate (HMBPP) into a mixture of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP). Acts in the terminal step of the DOXP MEP pathway for isoprenoid precursor biosynthesis
RIV7116_RS18990	COG0815	Transfers the fatty acyl group on membrane lipoproteins
RIV7116_RS19010	COG0589	response to stress
RIV7116_RS19025	COG0486	Exhibits a very high intrinsic GTPase hydrolysis rate. Involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA- cmnm(5)s(2)U34
RIV7116_RS19055	COG0667	Aldo Keto reductase
RIV7116_RS19090	COG1012	belongs to the aldehyde dehydrogenase family
RIV7116_RS19095	COG0515	serine threonine protein kinase
RIV7116_RS19095	COG1357	PFAM Pentapeptide repeats (8 copies)
RIV7116_RS19105	COG0043	3-octaprenyl-4-hydroxybenzoate carboxy-lyase activity
RIV7116_RS19145	COG1872	DUF167
RIV7116_RS19150	COG0767	ABC-type transport system involved in resistance to organic solvents, permease component
RIV7116_RS19165	COG2135	peptidase activity
RIV7116_RS19170	COG0457	Tetratricopeptide repeat
RIV7116_RS19175	COG0721	Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln)
RIV7116_RS19190	COG1136	(ABC) transporter
RIV7116_RS19190	COG0577	efflux transmembrane transporter activity
RIV7116_RS19205	COG0477	Major facilitator Superfamily
RIV7116_RS19215	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
RIV7116_RS19220	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
RIV7116_RS19225	COG3773	Cell wall hydrolase
RIV7116_RS19225	COG3409	Peptidoglycan-binding domain 1 protein
RIV7116_RS19340	COG1200	Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y-DNA)
RIV7116_RS19365	COG3706	GGDEF domain
RIV7116_RS19365	COG4251	negative regulation of phosphorylation
RIV7116_RS19365	COG2203	Gaf domain
RIV7116_RS19365	COG5001	Diguanylate cyclase
RIV7116_RS19375	COG0406	alpha-ribazole phosphatase activity
RIV7116_RS19380	COG0044	hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amides
RIV7116_RS19395	COG1127	ABC transporter
RIV7116_RS19455	COG2382	esterase
RIV7116_RS19465	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
RIV7116_RS19470	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
RIV7116_RS19475	COG2197	response regulator
RIV7116_RS19490	COG0639	Hydrolyzes diadenosine 5',5'''-P1,P4-tetraphosphate to yield ADP
RIV7116_RS19510	COG0480	Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome
RIV7116_RS19525	COG2110	phosphatase homologous to the C-terminal domain of histone macroH2A1
RIV7116_RS19540	COG0673	inositol 2-dehydrogenase activity
RIV7116_RS19585	COG2319	Wd-40 repeat
RIV7116_RS19585	COG4249	Peptidase C14 caspase catalytic subunit p20
RIV7116_RS19630	COG1012	belongs to the aldehyde dehydrogenase family
RIV7116_RS19655	COG2319	Wd-40 repeat
RIV7116_RS19655	COG1672	PFAM Archaeal ATPase
RIV7116_RS19660	COG1830	Aldolase
RIV7116_RS19670	COG1649	PFAM Uncharacterised BCR, COG1649
RIV7116_RS19695	COG2230	cyclopropane-fatty-acyl-phospholipid synthase
RIV7116_RS19735	COG0747	negative chemotaxis
RIV7116_RS19755	COG1295	ribonuclease BN
RIV7116_RS19815	COG0668	transmembrane transport
RIV7116_RS19825	COG0568	sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released
RIV7116_RS19835	COG1028	Short-chain dehydrogenase reductase Sdr
RIV7116_RS19840	COG4572	Cation transport regulator
RIV7116_RS19845	COG0783	Belongs to the Dps family
RIV7116_RS19880	COG1357	PFAM Pentapeptide repeats (8 copies)
RIV7116_RS19880	COG0515	serine threonine protein kinase
RIV7116_RS19895	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
RIV7116_RS19900	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
RIV7116_RS19905	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
RIV7116_RS19920	COG1254	Belongs to the acylphosphatase family
RIV7116_RS19935	COG0060	amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile)
RIV7116_RS19940	COG3344	reverse transcriptase
RIV7116_RS19945	COG0376	Bifunctional enzyme with both catalase and broad- spectrum peroxidase activity
RIV7116_RS19950	COG1192	Involved in chromosome partitioning
RIV7116_RS19965	COG1674	ftsk spoiiie
RIV7116_RS19980	COG1215	transferase activity, transferring glycosyl groups
RIV7116_RS19995	COG0438	transferase activity, transferring glycosyl groups
RIV7116_RS20005	COG3659	wide pore channel activity
RIV7116_RS20020	COG0498	Catalyzes the gamma-elimination of phosphate from L- phosphohomoserine and the beta-addition of water to produce L- threonine
RIV7116_RS20030	COG1214	PFAM Peptidase M22, glycoprotease
RIV7116_RS20040	COG0617	tRNA 3'-terminal CCA addition
RIV7116_RS20070	COG1649	PFAM Uncharacterised BCR, COG1649
RIV7116_RS20085	COG0512	Glutamine amidotransferase of anthranilate synthase
RIV7116_RS20090	COG0818	Recycling of diacylglycerol produced during the turnover of membrane phospholipid
RIV7116_RS20095	COG0319	Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA
RIV7116_RS20100	COG1186	Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA
RIV7116_RS20105	COG1186	Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA
RIV7116_RS20110	COG0670	Belongs to the BI1 family
RIV7116_RS20120	COG0033	Phosphoglucomutase
RIV7116_RS20125	COG0042	Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
RIV7116_RS20135	COG1943	Transposase
RIV7116_RS20145	COG1239	Involved in chlorophyll biosynthesis. Catalyzes the insertion of magnesium ion into protoporphyrin IX to yield Mg- protoporphyrin IX
RIV7116_RS20145	COG1240	Involved in chlorophyll biosynthesis. Catalyzes the insertion of magnesium ion into protoporphyrin IX to yield Mg- protoporphyrin IX
RIV7116_RS20150	COG0571	ribonuclease III activity
RIV7116_RS20155	COG5002	protein histidine kinase activity
RIV7116_RS20155	COG0784	Response regulator, receiver
RIV7116_RS20170	COG1162	GTPase activity
RIV7116_RS20180	COG2205	protein histidine kinase activity
RIV7116_RS20180	COG0745	RESPONSE REGULATOR receiver
RIV7116_RS20180	COG3292	Two component regulator propeller
RIV7116_RS20185	COG2814	Major facilitator Superfamily
RIV7116_RS20190	COG2988	succinylglutamate desuccinylase activity
RIV7116_RS20195	COG0583	DNA-binding transcription factor activity
RIV7116_RS20200	COG0463	Glycosyl transferase, family 2
RIV7116_RS20215	COG1902	pentaerythritol trinitrate reductase activity
RIV7116_RS20220	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
RIV7116_RS20230	COG0583	DNA-binding transcription factor activity
RIV7116_RS20245	COG0489	protein tyrosine kinase activity
RIV7116_RS20265	COG2730	Belongs to the glycosyl hydrolase 5 (cellulase A) family
RIV7116_RS20295	COG3349	Catalyzes the conversion of zeta-carotene to lycopene via the intermediary of neurosporene. It carries out two consecutive desaturations (introduction of double bonds) at positions C-7 and C-7'
RIV7116_RS20295	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
RIV7116_RS20305	COG0472	First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan
RIV7116_RS20310	COG0112	Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF- independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism
RIV7116_RS20325	COG0179	Fumarylacetoacetate (FAA) hydrolase
RIV7116_RS20330	COG0360	Binds together with S18 to 16S ribosomal RNA
RIV7116_RS20345	COG0586	Pfam SNARE associated Golgi protein
RIV7116_RS20350	COG0137	argininosuccinate synthase activity
RIV7116_RS20355	COG1216	Glycosyl transferase, family 2
RIV7116_RS20360	COG3852	Histidine kinase
RIV7116_RS20365	COG0052	Belongs to the universal ribosomal protein uS2 family
RIV7116_RS20370	COG0264	Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome
RIV7116_RS20380	COG1200	Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y-DNA)
RIV7116_RS20400	COG0519	Catalyzes the synthesis of GMP from XMP
RIV7116_RS20400	COG0518	GMP synthase (glutamine-hydrolyzing) activity
RIV7116_RS20430	COG1409	Hydrolyzes cAMP to 5'-AMP. Plays an important regulatory role in modulating the intracellular concentration of cAMP, thereby influencing cAMP-dependent processes
RIV7116_RS20440	COG0220	tRNA (guanine-N7-)-methyltransferase activity
RIV7116_RS20475	COG1429	ligase activity, forming nitrogen-metal bonds
RIV7116_RS20520	COG1132	(ABC) transporter
RIV7116_RS20530	COG0489	protein tyrosine kinase activity
RIV7116_RS20535	COG0438	transferase activity, transferring glycosyl groups
RIV7116_RS20560	COG1087	Belongs to the NAD(P)-dependent epimerase dehydratase family
RIV7116_RS20565	COG0579	oxidoreductase
RIV7116_RS20570	COG1208	COG1208 Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis translation initiation factor 2B, gamma epsilon subunits eIF-2Bgamma eIF-2Bepsilon
RIV7116_RS20585	COG4245	von Willebrand factor, type A
RIV7116_RS20590	COG0784	Response regulator, receiver
RIV7116_RS20600	COG0072	phenylalanine-tRNA ligase activity
RIV7116_RS20600	COG0073	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
RIV7116_RS20655	COG0601	transmembrane transport
RIV7116_RS20660	COG0747	negative chemotaxis
RIV7116_RS20680	COG0539	negative regulation of cytoplasmic translation
RIV7116_RS20700	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
RIV7116_RS20710	COG5398	heme oxygenase
RIV7116_RS20715	COG1109	Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
RIV7116_RS20725	COG0463	Glycosyl transferase, family 2
RIV7116_RS20730	COG0438	transferase activity, transferring glycosyl groups
RIV7116_RS20735	COG0438	transferase activity, transferring glycosyl groups
RIV7116_RS20745	COG0450	alkyl hydroperoxide reductase
RIV7116_RS20755	COG4251	negative regulation of phosphorylation
RIV7116_RS20760	COG0784	Response regulator, receiver
RIV7116_RS20765	COG2205	protein histidine kinase activity
RIV7116_RS20765	COG2202	Pas domain
RIV7116_RS20780	COG0339	signal peptide processing
RIV7116_RS20805	COG0589	response to stress
RIV7116_RS20820	COG3210	domain, Protein
RIV7116_RS20825	COG0343	queuine tRNA-ribosyltransferase activity
RIV7116_RS20835	COG0368	Joins adenosylcobinamide-GDP and alpha-ribazole to generate adenosylcobalamin (Ado-cobalamin). Also synthesizes adenosylcobalamin 5'-phosphate from adenosylcobinamide-GDP and alpha-ribazole 5'-phosphate
RIV7116_RS20845	COG1040	competence protein
RIV7116_RS20865	COG0809	Transfers and isomerizes the ribose moiety from AdoMet to the 7-aminomethyl group of 7-deazaguanine (preQ1-tRNA) to give epoxyqueuosine (oQ-tRNA)
RIV7116_RS20870	COG1028	Short-chain dehydrogenase reductase Sdr
RIV7116_RS20920	COG1372	Participates in initiation and elongation during chromosome replication
RIV7116_RS20920	COG0305	Participates in initiation and elongation during chromosome replication
RIV7116_RS20920	COG1372	Participates in initiation and elongation during chromosome replication
RIV7116_RS20920	COG0305	Participates in initiation and elongation during chromosome replication
RIV7116_RS20925	COG0359	binds to the 23S rRNA
RIV7116_RS20945	COG0565	Catalyzes the formation of 2'O-methylated cytidine (Cm32) or 2'O-methylated uridine (Um32) at position 32 in tRNA
RIV7116_RS20950	COG2267	carboxylic ester hydrolase activity
RIV7116_RS20960	COG0653	protein targeting
RIV7116_RS20970	COG0432	Pfam Uncharacterised protein family UPF0047
RIV7116_RS20980	COG0327	Belongs to the GTP cyclohydrolase I type 2 NIF3 family
RIV7116_RS21000	COG1236	Exonuclease of the beta-lactamase fold involved in RNA processing
RIV7116_RS21025	COG0582	viral genome integration into host DNA
RIV7116_RS21040	COG0030	16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase activity
RIV7116_RS21045	COG1947	Catalyzes the phosphorylation of the position 2 hydroxy group of 4-diphosphocytidyl-2C-methyl-D-erythritol
RIV7116_RS21055	COG4335	DNA alkylation repair
RIV7116_RS21095	COG2256	atpase related to the helicase subunit of the holliday junction resolvase
RIV7116_RS21110	COG3046	protein related to deoxyribodipyrimidine photolyase
RIV7116_RS21125	COG1598	PFAM Uncharacterised protein family UPF0150
RIV7116_RS21130	COG1995	Catalyzes the NAD(P)-dependent oxidation of 4- (phosphohydroxy)-L-threonine (HTP) into 2-amino-3-oxo-4- (phosphohydroxy)butyric acid which spontaneously decarboxylates to form 3-amino-2-oxopropyl phosphate (AHAP)
RIV7116_RS21140	COG0702	epimerase
RIV7116_RS21145	COG0061	Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP
RIV7116_RS21150	COG0745	RESPONSE REGULATOR receiver
RIV7116_RS21170	COG0134	indole-3-glycerol-phosphate synthase activity
RIV7116_RS21175	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
RIV7116_RS21180	COG2200	EAL domain
RIV7116_RS21180	COG2199	diguanylate cyclase activity
RIV7116_RS21195	COG1018	Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress
RIV7116_RS21205	COG0483	inositol monophosphate 1-phosphatase activity
RIV7116_RS21220	COG0484	heat shock protein binding
RIV7116_RS21225	COG3705	Required for the first step of histidine biosynthesis. May allow the feedback regulation of ATP phosphoribosyltransferase activity by histidine
RIV7116_RS21230	COG1143	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
RIV7116_RS21240	COG0362	Catalyzes the oxidative decarboxylation of 6- phosphogluconate to ribulose 5-phosphate and CO(2), with concomitant reduction of NADP to NADPH
RIV7116_RS21245	COG0515	serine threonine protein kinase
RIV7116_RS21250	COG0463	Glycosyl transferase, family 2
RIV7116_RS21250	COG0457	Tetratricopeptide repeat
RIV7116_RS21275	COG0436	Aminotransferase
RIV7116_RS21280	COG1357	PFAM Pentapeptide repeats (8 copies)
RIV7116_RS21280	COG0515	serine threonine protein kinase
RIV7116_RS21290	COG4100	CystaTHIonine beta-lyase family protein involved in aluminum resistance
RIV7116_RS21300	COG3239	Fatty acid desaturase
RIV7116_RS21305	COG3239	Fatty acid desaturase
RIV7116_RS21310	COG3239	Fatty acid desaturase
RIV7116_RS21315	COG0014	Catalyzes the NADPH-dependent reduction of L-glutamate 5-phosphate into L-glutamate 5-semialdehyde and phosphate. The product spontaneously undergoes cyclization to form 1-pyrroline-5- carboxylate
RIV7116_RS21335	COG0054	6,7-dimethyl-8-ribityllumazine synthase activity
RIV7116_RS21355	COG1028	Short-chain dehydrogenase reductase Sdr
RIV7116_RS21375	COG0814	amino acid
RIV7116_RS21390	COG2066	Belongs to the glutaminase family
RIV7116_RS21400	COG0697	spore germination
RIV7116_RS21410	COG0283	belongs to the cytidylate kinase family. Type 1 subfamily
RIV7116_RS21420	COG0276	Catalyzes the ferrous insertion into protoporphyrin IX
RIV7116_RS21435	COG0015	Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily
RIV7116_RS21440	COG0249	that it carries out the mismatch recognition step. This protein has a weak ATPase activity
RIV7116_RS21470	COG2715	membrane protein required for spore maturation
RIV7116_RS21480	COG0066	3-isopropylmalate dehydratase activity
RIV7116_RS21485	COG0065	Catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate, via the formation of 2-isopropylmaleate
RIV7116_RS21505	COG1489	DNA binding
RIV7116_RS21540	COG3629	intracellular signal transduction
RIV7116_RS21540	COG3903	Transcriptional regulator
RIV7116_RS21550	COG3932	Exopolysaccharide synthesis, ExoD
RIV7116_RS21560	COG2518	Catalyzes the methyl esterification of L-isoaspartyl residues in peptides and proteins that result from spontaneous decomposition of normal L-aspartyl and L-asparaginyl residues. It plays a role in the repair and or degradation of damaged proteins
RIV7116_RS21570	COG1757	Na H antiporter
RIV7116_RS21580	COG1262	PFAM Formylglycine-generating sulfatase enzyme
RIV7116_RS21585	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
RIV7116_RS21585	COG1112	Superfamily I DNA and RNA helicases and helicase subunits
RIV7116_RS21605	COG1266	CAAX protease self-immunity
RIV7116_RS21610	COG0854	Catalyzes the complicated ring closure reaction between the two acyclic compounds 1-deoxy-D-xylulose-5-phosphate (DXP) and 3-amino-2-oxopropyl phosphate (1-amino-acetone-3-phosphate or AAP) to form pyridoxine 5'-phosphate (PNP) and inorganic phosphate
RIV7116_RS21630	COG1963	PFAM Acid phosphatase vanadium-dependent haloperoxidase related
RIV7116_RS21640	COG0190	Catalyzes the oxidation of 5,10- methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10-methenyltetrahydrofolate to 10- formyltetrahydrofolate
RIV7116_RS21650	COG1051	belongs to the nudix hydrolase family
RIV7116_RS21660	COG0628	permease
RIV7116_RS21665	COG0531	amino acid
RIV7116_RS21670	COG2264	protein methyltransferase activity
RIV7116_RS21680	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
RIV7116_RS21690	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
RIV7116_RS21710	COG3773	Cell wall hydrolase
RIV7116_RS21710	COG3409	Peptidoglycan-binding domain 1 protein
RIV7116_RS21715	COG0251	oxidation-reduction process
RIV7116_RS21720	COG2988	succinylglutamate desuccinylase activity
RIV7116_RS21725	COG2814	Major facilitator Superfamily
RIV7116_RS21740	COG2197	response regulator
RIV7116_RS21745	COG2124	cytochrome p450
RIV7116_RS21755	COG2124	cytochrome p450
RIV7116_RS21760	COG2124	cytochrome p450
RIV7116_RS21770	COG1716	ATPase activity
RIV7116_RS21790	COG2319	Wd-40 repeat
RIV7116_RS21790	COG4249	Peptidase C14 caspase catalytic subunit p20
RIV7116_RS21815	COG0547	Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'-phosphoribosyl)-anthranilate (PRA)
RIV7116_RS21820	COG3659	wide pore channel activity
RIV7116_RS21830	COG0133	tryptophan synthase activity
RIV7116_RS21835	COG0159	tryptophan synthase activity
RIV7116_RS21840	COG0147	Part of a heterotetrameric complex that catalyzes the two-step biosynthesis of anthranilate, an intermediate in the biosynthesis of L-tryptophan. In the first step, the glutamine- binding beta subunit (TrpG) of anthranilate synthase (AS) provides the glutamine amidotransferase activity which generates ammonia as a substrate that, along with chorismate, is used in the second step, catalyzed by the large alpha subunit of AS (TrpE) to produce anthranilate. In the absence of TrpG, TrpE can synthesize anthranilate directly from chorismate and high concentrations of ammonia
RIV7116_RS21840	COG0512	Glutamine amidotransferase of anthranilate synthase
RIV7116_RS21850	COG2876	3-deoxy-7-phosphoheptulonate synthase activity
RIV7116_RS21860	COG2264	protein methyltransferase activity
RIV7116_RS21870	COG0367	asparagine synthase
RIV7116_RS21900	COG1858	cytochrome C peroxidase
RIV7116_RS21950	COG2329	Antibiotic biosynthesis monooxygenase
RIV7116_RS21960	COG0328	RNA-DNA hybrid ribonuclease activity
RIV7116_RS21980	COG0211	Belongs to the bacterial ribosomal protein bL27 family
RIV7116_RS21985	COG0261	This protein binds to 23S rRNA in the presence of protein L20
RIV7116_RS22015	COG1807	4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family
RIV7116_RS22030	COG1959	2 iron, 2 sulfur cluster binding
RIV7116_RS22035	COG1270	Converts cobyric acid to cobinamide by the addition of aminopropanol on the F carboxylic group
RIV7116_RS22040	COG2065	Also displays a weak uracil phosphoribosyltransferase activity which is not physiologically significant
RIV7116_RS22055	COG3706	GGDEF domain
RIV7116_RS22055	COG5001	Diguanylate cyclase
RIV7116_RS22055	COG2203	Gaf domain
RIV7116_RS22055	COG4251	negative regulation of phosphorylation
RIV7116_RS22065	COG0314	molybdopterin synthase activity
RIV7116_RS22080	COG2127	Involved in the modulation of the specificity of the ClpAP-mediated ATP-dependent protein degradation
RIV7116_RS22090	COG0739	heme binding
RIV7116_RS22100	COG1376	ErfK ybiS ycfS ynhG family protein
RIV7116_RS22105	COG1595	DNA-templated transcription, initiation
RIV7116_RS22120	COG0495	leucyl-tRNA aminoacylation
RIV7116_RS22125	COG1210	Utp--glucose-1-phosphate uridylyltransferase
RIV7116_RS22130	COG0253	Catalyzes the stereoinversion of LL-2,6- diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso- DAP), a precursor of L-lysine and an essential component of the bacterial peptidoglycan
RIV7116_RS22135	COG1619	proteins homologs of microcin C7 resistance protein MccF
RIV7116_RS22145	COG1994	Peptidase M50
RIV7116_RS22150	COG1994	Peptidase M50
RIV7116_RS22175	COG0138	bifunctional purine biosynthesis protein purh
RIV7116_RS22185	COG3536	Protein conserved in bacteria
RIV7116_RS22190	COG0452	Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine
RIV7116_RS22195	COG1357	PFAM Pentapeptide repeats (8 copies)
RIV7116_RS22195	COG0515	serine threonine protein kinase
RIV7116_RS22240	COG1181	Belongs to the D-alanine--D-alanine ligase family
RIV7116_RS22270	COG0621	Catalyzes the methylthiolation of N6- (dimethylallyl)adenosine (i(6)A), leading to the formation of 2- methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine
RIV7116_RS22285	COG3670	oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen
RIV7116_RS22320	COG1404	Belongs to the peptidase S8 family
RIV7116_RS22345	COG2234	aminopeptidase activity
RIV7116_RS22360	COG2103	Specifically catalyzes the cleavage of the D-lactyl ether substituent of MurNAc 6-phosphate, producing GlcNAc 6- phosphate and D-lactate
RIV7116_RS22385	COG2201	protein-glutamate methylesterase activity
RIV7116_RS22400	COG0840	transmembrane signaling receptor activity
RIV7116_RS22400	COG2203	Gaf domain
RIV7116_RS22410	COG0784	Response regulator, receiver
RIV7116_RS22410	COG2198	Histidine kinase
RIV7116_RS22410	COG0643	Histidine kinase
RIV7116_RS22420	COG1073	alpha beta
RIV7116_RS22420	COG2226	methyltransferase
RIV7116_RS22440	COG0566	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
RIV7116_RS22455	COG0505	Belongs to the CarA family
RIV7116_RS22480	COG0699	ATPase. Has a role at an early stage in the morphogenesis of the spore coat
RIV7116_RS22485	COG0699	ATPase. Has a role at an early stage in the morphogenesis of the spore coat
RIV7116_RS22490	COG1598	PFAM Uncharacterised protein family UPF0150
RIV7116_RS22540	COG3266	domain, Protein
RIV7116_RS22540	COG0515	serine threonine protein kinase
RIV7116_RS22610	COG1641	Involved in the biosynthesis of a nickel-pincer cofactor ((SCS)Ni(II) pincer complex). Binds Ni(2 ), and functions in nickel delivery to pyridinium-3,5-bisthiocarboxylic acid mononucleotide (P2TMN), to form the mature cofactor. Is thus probably required for the activation of nickel-pincer cofactor- dependent enzymes
RIV7116_RS22615	COG0009	L-threonylcarbamoyladenylate synthase
RIV7116_RS22630	COG2205	protein histidine kinase activity
RIV7116_RS22645	COG0858	One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Required for efficient processing of 16S rRNA. May interact with the 5'-terminal helix region of 16S rRNA
RIV7116_RS22655	COG0574	Belongs to the PEP-utilizing enzyme family
RIV7116_RS22655	COG1080	General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr)
RIV7116_RS22660	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
RIV7116_RS22670	COG4251	negative regulation of phosphorylation
RIV7116_RS22675	COG0784	Response regulator, receiver
RIV7116_RS22680	COG5002	protein histidine kinase activity
RIV7116_RS22730	COG2337	Toxic component of a toxin-antitoxin (TA) module
RIV7116_RS22740	COG1309	transcriptional regulator
RIV7116_RS22745	COG1028	Short-chain dehydrogenase reductase Sdr
RIV7116_RS22750	COG0300	oxidoreductase activity
RIV7116_RS22795	COG2319	Wd-40 repeat
RIV7116_RS22795	COG4249	Peptidase C14 caspase catalytic subunit p20
RIV7116_RS22800	COG1720	tRNA m6t6A37 methyltransferase activity
RIV7116_RS22835	COG0013	Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain
RIV7116_RS22850	COG0465	Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins
RIV7116_RS22855	COG3621	Patatin-like phospholipase
RIV7116_RS22890	COG1131	(ABC) transporter
RIV7116_RS22895	COG1361	Conserved repeat domain
RIV7116_RS22895	COG3266	domain, Protein
RIV7116_RS22895	COG2911	Protein conserved in bacteria
RIV7116_RS22910	COG0352	thiamine-phosphate diphosphorylase activity
RIV7116_RS22975	COG0028	Belongs to the TPP enzyme family
RIV7116_RS22980	COG1177	transmembrane transport
RIV7116_RS23005	COG0515	serine threonine protein kinase
RIV7116_RS23005	COG1357	PFAM Pentapeptide repeats (8 copies)
RIV7116_RS23040	COG1215	transferase activity, transferring glycosyl groups
RIV7116_RS23045	COG0438	transferase activity, transferring glycosyl groups
RIV7116_RS23050	COG0297	glycogen (starch) synthase activity
RIV7116_RS23055	COG0297	glycogen (starch) synthase activity
RIV7116_RS23100	COG0788	formyltetrahydrofolate deformylase activity
RIV7116_RS23105	COG2319	Wd-40 repeat
RIV7116_RS23105	COG3903	Transcriptional regulator
RIV7116_RS23115	COG2197	response regulator
RIV7116_RS23130	COG0505	Belongs to the CarA family
RIV7116_RS23140	COG0583	DNA-binding transcription factor activity
RIV7116_RS23145	COG4191	Histidine kinase
RIV7116_RS23150	COG2207	Transcriptional regulator
RIV7116_RS23150	COG1917	Cupin 2, conserved barrel domain protein
RIV7116_RS23160	COG1228	amidohydrolase
RIV7116_RS23225	COG2770	Histidine kinase
RIV7116_RS23225	COG2208	phosphoserine phosphatase activity
RIV7116_RS23245	COG1008	NDH-1 shuttles electrons from NAD(P)H, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be plastoquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
RIV7116_RS23270	COG0028	Belongs to the TPP enzyme family
RIV7116_RS23275	COG0332	Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
RIV7116_RS23285	COG0523	cobalamin synthesis protein
RIV7116_RS23315	COG0811	peptide transport
RIV7116_RS23335	COG1226	(belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family)
RIV7116_RS23350	COG1309	transcriptional regulator
RIV7116_RS23360	COG4365	Involved in bacillithiol (BSH) biosynthesis. May catalyze the last step of the pathway, the addition of cysteine to glucosamine malate (GlcN-Mal) to generate BSH
RIV7116_RS23365	COG0438	transferase activity, transferring glycosyl groups
RIV7116_RS23385	COG0604	alcohol dehydrogenase
RIV7116_RS23390	COG0667	Aldo Keto reductase
RIV7116_RS23395	COG1672	PFAM Archaeal ATPase
RIV7116_RS23395	COG2319	Wd-40 repeat
RIV7116_RS23400	COG3903	Transcriptional regulator
RIV7116_RS23400	COG2319	Wd-40 repeat
RIV7116_RS23425	COG1649	PFAM Uncharacterised BCR, COG1649
RIV7116_RS23430	COG0625	glutathione transferase activity
RIV7116_RS23460	COG0385	Bile acid
RIV7116_RS23465	COG3659	wide pore channel activity
RIV7116_RS23510	COG1178	ABC-type Fe3 transport system permease component
RIV7116_RS23515	COG3842	ATPase activity
RIV7116_RS23520	COG2821	murein-degrading enzyme. may play a role in recycling of muropeptides during cell elongation and or cell division
RIV7116_RS23525	COG2896	Catalyzes the cyclization of GTP to (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate
RIV7116_RS23535	COG0716	FMN binding
RIV7116_RS23555	COG5002	protein histidine kinase activity
RIV7116_RS23575	COG1409	Hydrolyzes cAMP to 5'-AMP. Plays an important regulatory role in modulating the intracellular concentration of cAMP, thereby influencing cAMP-dependent processes
RIV7116_RS23615	COG1372	Participates in initiation and elongation during chromosome replication
RIV7116_RS23615	COG0305	Participates in initiation and elongation during chromosome replication
RIV7116_RS23615	COG1372	Participates in initiation and elongation during chromosome replication
RIV7116_RS23615	COG0305	Participates in initiation and elongation during chromosome replication
RIV7116_RS23690	COG0465	Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins
RIV7116_RS23710	COG0583	DNA-binding transcription factor activity
RIV7116_RS23730	COG0583	DNA-binding transcription factor activity
RIV7116_RS23750	COG1028	Short-chain dehydrogenase reductase Sdr
RIV7116_RS23850	COG0507	A helicase nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and repair. Holoenzyme degrades any linearized DNA that is unable to undergo homologous recombination. In the holoenzyme this subunit has ssDNA-dependent ATPase and 5'-3' helicase activity. When added to pre-assembled RecBC greatly stimulates nuclease activity and augments holoenzyme processivity. Negatively regulates the RecA-loading ability of RecBCD
RIV7116_RS23860	COG0507	A helicase nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and repair. Holoenzyme degrades any linearized DNA that is unable to undergo homologous recombination. In the holoenzyme this subunit has ssDNA-dependent ATPase and 5'-3' helicase activity. When added to pre-assembled RecBC greatly stimulates nuclease activity and augments holoenzyme processivity. Negatively regulates the RecA-loading ability of RecBCD
RIV7116_RS23965	COG0501	Belongs to the peptidase M48B family
RIV7116_RS24125	COG0739	heme binding
RIV7116_RS24195	COG2815	serine threonine protein kinase
RIV7116_RS24195	COG0515	serine threonine protein kinase
RIV7116_RS24225	COG2319	Wd-40 repeat
RIV7116_RS24225	COG3903	Transcriptional regulator
RIV7116_RS24230	COG0515	serine threonine protein kinase
RIV7116_RS24245	COG2831	hemolysin activation secretion protein
RIV7116_RS24350	COG1598	PFAM Uncharacterised protein family UPF0150
RIV7116_RS24400	COG0732	type I restriction modification DNA specificity domain
RIV7116_RS24405	COG0610	Subunit R is required for both nuclease and ATPase activities, but not for modification
RIV7116_RS24465	COG3344	reverse transcriptase
RIV7116_RS24500	COG5433	transposase activity
RIV7116_RS24535	COG3387	PFAM Glycoside hydrolase 15-related
RIV7116_RS24540	COG0745	RESPONSE REGULATOR receiver
RIV7116_RS24545	COG5002	protein histidine kinase activity
RIV7116_RS24565	COG2855	membrane
RIV7116_RS24580	COG2046	Belongs to the sulfate adenylyltransferase family
RIV7116_RS24585	COG0471	metal ion transport
RIV7116_RS24585	COG3273	potassium ion transport
RIV7116_RS24600	COG1819	glycosyl
RIV7116_RS24610	COG0024	Methionine aminopeptidase
RIV7116_RS24620	COG5001	Diguanylate cyclase
RIV7116_RS24620	COG2203	Gaf domain
RIV7116_RS24620	COG3706	GGDEF domain
RIV7116_RS24620	COG4251	negative regulation of phosphorylation
RIV7116_RS24680	COG2335	COG2335, Secreted and surface protein containing fasciclin-like repeats
RIV7116_RS24685	COG0724	RNA recognition motif
RIV7116_RS24690	COG3457	Alanine racemase
RIV7116_RS24700	COG1357	PFAM Pentapeptide repeats (8 copies)
RIV7116_RS24725	COG0121	glutamine amidotransferase
RIV7116_RS24730	COG0235	Class ii aldolase
RIV7116_RS24735	COG4359	Dephosphorylates 2-hydroxy-3-keto-5-methylthiopentenyl- 1-phosphate (HK-MTPenyl-1-P) yielding 1,2-dihydroxy-3-keto-5- methylthiopentene (DHK-MTPene)
RIV7116_RS24740	COG1791	Catalyzes 2 different reactions between oxygene and the acireductone 1,2-dihydroxy-3-keto-5-methylthiopentene (DHK-MTPene) depending upon the metal bound in the active site. Fe-containing acireductone dioxygenase (Fe-ARD) produces formate and 2-keto-4- methylthiobutyrate (KMTB), the alpha-ketoacid precursor of methionine in the methionine recycle pathway. Ni-containing acireductone dioxygenase (Ni-ARD) produces methylthiopropionate, carbon monoxide and formate, and does not lie on the methionine recycle pathway
RIV7116_RS24750	COG0415	Belongs to the DNA photolyase family
RIV7116_RS24775	COG0232	Belongs to the dGTPase family. Type 2 subfamily
RIV7116_RS24785	COG0673	inositol 2-dehydrogenase activity
RIV7116_RS24795	COG0828	Belongs to the bacterial ribosomal protein bS21 family
RIV7116_RS24800	COG0724	RNA recognition motif
RIV7116_RS24810	COG4992	N2-acetyl-L-ornithine:2-oxoglutarate 5-aminotransferase activity
RIV7116_RS24815	COG0564	pseudouridine synthase activity
RIV7116_RS24875	COG2319	Wd-40 repeat
RIV7116_RS24875	COG3903	Transcriptional regulator
RIV7116_RS24880	COG0515	serine threonine protein kinase
RIV7116_RS24910	COG1404	Belongs to the peptidase S8 family
RIV7116_RS24950	COG0635	Involved in the biosynthesis of porphyrin-containing compound
RIV7116_RS24975	COG0443	Heat shock 70 kDa protein
RIV7116_RS25005	COG0465	Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins
RIV7116_RS25045	COG2831	hemolysin activation secretion protein
RIV7116_RS25075	COG2226	methyltransferase
RIV7116_RS25080	COG1222	aaa ATPase
RIV7116_RS25195	COG2072	flavoprotein involved in K transport
RIV7116_RS25205	COG1811	Na channel or pump
RIV7116_RS25240	COG3226	Transcriptional regulator
RIV7116_RS25310	COG0625	glutathione transferase activity
RIV7116_RS25325	COG2226	methyltransferase
RIV7116_RS25330	COG2124	cytochrome p450
RIV7116_RS25365	COG0678	peroxiredoxin activity
RIV7116_RS25375	COG1132	(ABC) transporter
RIV7116_RS25400	COG2010	Cytochrome c
RIV7116_RS25415	COG0118	IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisH subunit provides the glutamine amidotransferase activity that produces the ammonia necessary to HisF for the synthesis of IGP and AICAR
RIV7116_RS25480	COG0157	Belongs to the NadC ModD family
RIV7116_RS25505	COG0018	arginyl-trna synthetase
RIV7116_RS25540	COG0651	ATP synthesis coupled electron transport
RIV7116_RS25545	COG1006	Multisubunit Na H antiporter MnhC subunit
RIV7116_RS25570	COG1012	belongs to the aldehyde dehydrogenase family
RIV7116_RS25595	COG3240	lipase activity
RIV7116_RS25605	COG0640	Transcriptional regulator
RIV7116_RS25610	COG2217	Heavy metal translocating P-type atpase
RIV7116_RS25620	COG2274	protein secretion by the type I secretion system
RIV7116_RS25625	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
RIV7116_RS25645	COG3185	4-Hydroxyphenylpyruvate dioxygenase
RIV7116_RS25660	COG0745	RESPONSE REGULATOR receiver
RIV7116_RS25675	COG0139	Catalyzes the hydrolysis of the adenine ring of phosphoribosyl-AMP
RIV7116_RS25675	COG0140	phosphoribosyl-ATP diphosphatase activity
RIV7116_RS25680	COG0001	glutamate-1-semialdehyde 2,1-aminomutase activity
RIV7116_RS25685	COG1357	PFAM Pentapeptide repeats (8 copies)
RIV7116_RS25685	COG0515	serine threonine protein kinase
RIV7116_RS25690	COG1716	ATPase activity
RIV7116_RS25695	COG0468	Can catalyze the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage
RIV7116_RS25700	COG0563	adenylate kinase activity
RIV7116_RS25730	COG0128	3-phosphoshikimate 1-carboxyvinyltransferase activity
RIV7116_RS25735	COG1117	ATPase-coupled phosphate ion transmembrane transporter activity
RIV7116_RS25740	COG0581	inorganic phosphate transmembrane transporter activity
RIV7116_RS25745	COG0573	inorganic phosphate transmembrane transporter activity
RIV7116_RS25755	COG2852	Protein conserved in bacteria
RIV7116_RS25765	COG1008	NDH-1 shuttles electrons from NAD(P)H, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be plastoquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
RIV7116_RS25770	COG1009	NADH ubiquinone oxidoreductase subunit 5 chain L Multisubunit Na H antiporter, MnhA subunit
RIV7116_RS25790	COG0010	Belongs to the arginase family
RIV7116_RS25795	COG3228	Belongs to the MtfA family
RIV7116_RS25800	COG1171	Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short- lived. The second step is the nonenzymatic hydrolysis of the enamine imine intermediates to form 2-ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA
RIV7116_RS25810	COG0656	L-ascorbic acid biosynthetic process
RIV7116_RS25825	COG1028	Short-chain dehydrogenase reductase Sdr
RIV7116_RS25885	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
RIV7116_RS25915	COG0649	NAD binding
RIV7116_RS25955	COG2385	sporulation resulting in formation of a cellular spore
RIV7116_RS25965	COG1234	tRNA 3'-trailer cleavage
RIV7116_RS25980	COG1994	Peptidase M50
RIV7116_RS25980	COG0517	IMP dehydrogenase activity
RIV7116_RS25985	COG0042	Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
RIV7116_RS26025	COG0110	maltose O-acetyltransferase activity
RIV7116_RS26035	COG0671	phosphoesterase, PA-phosphatase related
RIV7116_RS26060	COG2710	Component of the dark-operative protochlorophyllide reductase (DPOR) that uses Mg-ATP and reduced ferredoxin to reduce ring D of protochlorophyllide (Pchlide) to form chlorophyllide a (Chlide). This reaction is light-independent. The NB-protein
RIV7116_RS26075	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
RIV7116_RS26080	COG0292	Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit
RIV7116_RS26085	COG0291	Belongs to the bacterial ribosomal protein bL35 family
RIV7116_RS26100	COG1028	Short-chain dehydrogenase reductase Sdr
RIV7116_RS26110	COG2041	Part of the MsrPQ system that repairs oxidized periplasmic proteins containing methionine sulfoxide residues (Met-O), using respiratory chain electrons. Thus protects these proteins from oxidative-stress damage caused by reactive species of oxygen and chlorine generated by the host defense mechanisms. MsrPQ is essential for the maintenance of envelope integrity under bleach stress, rescuing a wide series of structurally unrelated periplasmic proteins from methionine oxidation. The catalytic subunit MsrP is non-stereospecific, being able to reduce both (R-) and (S-) diastereoisomers of methionine sulfoxide
RIV7116_RS26135	COG0412	Dienelactone hydrolase
RIV7116_RS26140	COG2318	DinB family
RIV7116_RS26150	COG4399	Belongs to the UPF0754 family
RIV7116_RS26155	COG2226	methyltransferase
RIV7116_RS26170	COG2978	secondary active p-aminobenzoyl-glutamate transmembrane transporter activity
RIV7116_RS26205	COG2815	serine threonine protein kinase
RIV7116_RS26205	COG0515	serine threonine protein kinase
RIV7116_RS26210	COG3064	Membrane
RIV7116_RS26210	COG4991	sh3 domain protein
RIV7116_RS26210	COG0515	serine threonine protein kinase
RIV7116_RS26245	COG5001	Diguanylate cyclase
RIV7116_RS26245	COG4251	negative regulation of phosphorylation
RIV7116_RS26245	COG3706	GGDEF domain
RIV7116_RS26245	COG2203	Gaf domain
RIV7116_RS26255	COG0515	serine threonine protein kinase
RIV7116_RS26255	COG1357	PFAM Pentapeptide repeats (8 copies)
RIV7116_RS26260	COG1357	PFAM Pentapeptide repeats (8 copies)
RIV7116_RS26260	COG0515	serine threonine protein kinase
RIV7116_RS26270	COG0694	Involved in iron-sulfur cluster biogenesis. Binds a 4Fe- 4S cluster, can transfer this cluster to apoproteins, and thereby intervenes in the maturation of Fe S proteins. Could also act as a scaffold chaperone for damaged Fe S proteins
RIV7116_RS26300	COG3405	Belongs to the glycosyl hydrolase 8 (cellulase D) family
RIV7116_RS26310	COG1215	transferase activity, transferring glycosyl groups
RIV7116_RS26315	COG4999	Histidine kinase
RIV7116_RS26315	COG2205	protein histidine kinase activity
RIV7116_RS26315	COG3437	response regulator, receiver
RIV7116_RS26315	COG3850	Histidine kinase
RIV7116_RS26325	COG0481	GTPase activity
RIV7116_RS26360	COG2204	response regulator
RIV7116_RS26365	COG0784	Response regulator, receiver
RIV7116_RS26365	COG2205	protein histidine kinase activity
RIV7116_RS26365	COG5002	protein histidine kinase activity
RIV7116_RS26405	COG0040	Catalyzes the condensation of ATP and 5-phosphoribose 1- diphosphate to form N'-(5'-phosphoribosyl)-ATP (PR-ATP). Has a crucial role in the pathway because the rate of histidine biosynthesis seems to be controlled primarily by regulation of hisG enzymatic activity
RIV7116_RS26410	COG0745	RESPONSE REGULATOR receiver
RIV7116_RS26435	COG1680	COG1680 Beta-lactamase class C and other penicillin binding
RIV7116_RS26440	COG1294	oxidase, subunit
RIV7116_RS26445	COG1271	oxidase subunit
RIV7116_RS26465	COG2319	Wd-40 repeat
RIV7116_RS26465	COG5635	Nacht domain
RIV7116_RS26470	COG0580	Belongs to the MIP aquaporin (TC 1.A.8) family
RIV7116_RS26475	COG0389	Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII
RIV7116_RS26490	COG1196	nuclear chromosome segregation
RIV7116_RS26490	COG3264	Mechanosensitive ion channel
RIV7116_RS26500	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
RIV7116_RS26505	COG3264	Mechanosensitive ion channel
RIV7116_RS26505	COG1196	nuclear chromosome segregation
RIV7116_RS26510	COG2205	protein histidine kinase activity
RIV7116_RS26510	COG0784	Response regulator, receiver
RIV7116_RS26515	COG2205	protein histidine kinase activity
RIV7116_RS26515	COG0784	Response regulator, receiver
RIV7116_RS26525	COG3206	protein involved in exopolysaccharide biosynthesis
RIV7116_RS26525	COG0489	protein tyrosine kinase activity
RIV7116_RS26530	COG1215	transferase activity, transferring glycosyl groups
RIV7116_RS26550	COG0438	transferase activity, transferring glycosyl groups
RIV7116_RS26575	COG1922	lipopolysaccharide N-acetylmannosaminouronosyltransferase activity
RIV7116_RS26580	COG2148	undecaprenyl-phosphate glucose phosphotransferase activity
RIV7116_RS26590	COG1117	ATPase-coupled phosphate ion transmembrane transporter activity
RIV7116_RS26595	COG0581	inorganic phosphate transmembrane transporter activity
RIV7116_RS26600	COG0573	inorganic phosphate transmembrane transporter activity
RIV7116_RS26605	COG0226	Part of the ABC transporter complex PstSACB involved in phosphate import
RIV7116_RS26615	COG0811	peptide transport
RIV7116_RS26635	COG1196	nuclear chromosome segregation
RIV7116_RS26660	COG2124	cytochrome p450
RIV7116_RS26690	COG0606	chelatase, subunit chli
RIV7116_RS26700	COG0537	adenosine 5'-monophosphoramidase activity
RIV7116_RS26720	COG0353	May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO
RIV7116_RS26725	COG0583	DNA-binding transcription factor activity
RIV7116_RS26730	COG3937	granule-associated protein
RIV7116_RS26735	COG0661	Is probably a protein kinase regulator of UbiI activity which is involved in aerobic coenzyme Q (ubiquinone) biosynthesis
RIV7116_RS26740	COG0631	protein serine/threonine phosphatase activity
RIV7116_RS26750	COG0515	serine threonine protein kinase
RIV7116_RS26760	COG2377	Catalyzes the specific phosphorylation of 1,6-anhydro-N- acetylmuramic acid (anhMurNAc) with the simultaneous cleavage of the 1,6-anhydro ring, generating MurNAc-6-P. Is required for the utilization of anhMurNAc either imported from the medium or derived from its own cell wall murein, and thus plays a role in cell wall recycling
RIV7116_RS26765	COG2156	Part of the high-affinity ATP-driven potassium transport (or Kdp) system, which catalyzes the hydrolysis of ATP coupled with the electrogenic transport of potassium into the cytoplasm. This subunit acts as a catalytic chaperone that increases the ATP- binding affinity of the ATP-hydrolyzing subunit KdpB by the formation of a transient KdpB KdpC ATP ternary complex
RIV7116_RS26770	COG2216	Part of the high-affinity ATP-driven potassium transport (or Kdp) system, which catalyzes the hydrolysis of ATP coupled with the electrogenic transport of potassium into the cytoplasm. This subunit is responsible for energy coupling to the transport system
RIV7116_RS26775	COG2060	Part of the high-affinity ATP-driven potassium transport (or Kdp) system, which catalyzes the hydrolysis of ATP coupled with the electrogenic transport of potassium into the cytoplasm. This subunit binds and transports the potassium across the cytoplasmic membrane
RIV7116_RS26780	COG4251	negative regulation of phosphorylation
RIV7116_RS26785	COG3279	Response regulator of the LytR AlgR family
RIV7116_RS26790	COG4251	negative regulation of phosphorylation
RIV7116_RS26795	COG0467	Core component of the KaiABC clock protein complex, which constitutes the main circadian regulator in cyanobacteria. Binds to DNA. The KaiABC complex may act as a promoter-nonspecific transcription regulator that represses transcription, possibly by acting on the state of chromosome compaction
RIV7116_RS26800	COG2205	protein histidine kinase activity
RIV7116_RS26800	COG0784	Response regulator, receiver
RIV7116_RS26805	COG1198	Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA
RIV7116_RS26810	COG0568	sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released
RIV7116_RS26825	COG2010	Cytochrome c
RIV7116_RS26890	COG0445	tRNA wobble uridine modification
RIV7116_RS26900	COG0421	Catalyzes the irreversible transfer of a propylamine group from the amino donor S-adenosylmethioninamine (decarboxy- AdoMet) to putrescine (1,4-diaminobutane) to yield spermidine
RIV7116_RS26905	COG2020	methyltransferase activity
RIV7116_RS26955	COG2045	Belongs to the ComB family
RIV7116_RS26960	COG0583	DNA-binding transcription factor activity
RIV7116_RS26975	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
RIV7116_RS26990	COG4577	Carbon dioxide concentrating mechanism carboxysome shell protein
RIV7116_RS26995	COG4577	Carbon dioxide concentrating mechanism carboxysome shell protein
RIV7116_RS27010	COG1975	Xanthine and CO dehydrogenases maturation factor, XdhC CoxF family
RIV7116_RS27015	COG1529	Aldehyde oxidase and xanthine dehydrogenase
RIV7116_RS27020	COG1319	Aerobic-type carbon monoxide dehydrogenase, middle subunit CoxM
RIV7116_RS27025	COG2080	2 iron, 2 sulfur cluster binding
RIV7116_RS27030	COG2239	Acts as a magnesium transporter
RIV7116_RS27045	COG0515	serine threonine protein kinase
RIV7116_RS27070	COG1473	amidohydrolase
RIV7116_RS27085	COG2027	D-alanyl-D-alanine carboxypeptidase
RIV7116_RS27125	COG1716	ATPase activity
RIV7116_RS27175	COG1160	GTP binding
RIV7116_RS27185	COG1028	Short-chain dehydrogenase reductase Sdr
RIV7116_RS27215	COG1696	Membrane protein involved in D-alanine export
RIV7116_RS27240	COG0398	Pfam SNARE associated Golgi protein
RIV7116_RS27245	COG0398	Pfam SNARE associated Golgi protein
RIV7116_RS27260	COG2197	response regulator
RIV7116_RS27265	COG4585	Histidine kinase
RIV7116_RS27280	COG0577	efflux transmembrane transporter activity
RIV7116_RS27280	COG1136	(ABC) transporter
RIV7116_RS27285	COG1136	(ABC) transporter
RIV7116_RS27305	COG1174	glycine betaine transport
RIV7116_RS27310	COG1125	glycine betaine transport
RIV7116_RS27310	COG0517	IMP dehydrogenase activity
RIV7116_RS27385	COG3688	RNA-binding protein containing a PIN domain
RIV7116_RS27390	COG1122	ATPase activity
RIV7116_RS27405	COG3659	wide pore channel activity
RIV7116_RS27410	COG1959	2 iron, 2 sulfur cluster binding
RIV7116_RS27415	COG0031	Belongs to the cysteine synthase cystathionine beta- synthase family
RIV7116_RS27420	COG0484	heat shock protein binding
RIV7116_RS27435	COG2813	Specifically methylates the guanine in position
RIV7116_RS27445	COG0308	aminopeptidase N
RIV7116_RS27455	COG0438	transferase activity, transferring glycosyl groups
RIV7116_RS27470	COG0438	transferase activity, transferring glycosyl groups
RIV7116_RS27475	COG1216	Glycosyl transferase, family 2
RIV7116_RS27475	COG0463	Glycosyl transferase, family 2
RIV7116_RS27485	COG1216	Glycosyl transferase, family 2
RIV7116_RS27485	COG0463	Glycosyl transferase, family 2
RIV7116_RS27510	COG0661	Is probably a protein kinase regulator of UbiI activity which is involved in aerobic coenzyme Q (ubiquinone) biosynthesis
RIV7116_RS27545	COG1132	(ABC) transporter
RIV7116_RS27555	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
RIV7116_RS27575	COG0272	DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA
RIV7116_RS27575	COG0758	DNA mediated transformation
RIV7116_RS27600	COG1028	Short-chain dehydrogenase reductase Sdr
RIV7116_RS27610	COG3180	Ammonia monooxygenase
RIV7116_RS27620	COG4191	Histidine kinase
RIV7116_RS27625	COG0625	glutathione transferase activity
RIV7116_RS27640	COG1012	belongs to the aldehyde dehydrogenase family
RIV7116_RS27650	COG0124	histidyl-tRNA synthetase
RIV7116_RS27670	COG3338	carbonate dehydratase activity
RIV7116_RS27680	COG2319	Wd-40 repeat
RIV7116_RS27680	COG4249	Peptidase C14 caspase catalytic subunit p20
RIV7116_RS27690	COG1239	Involved in chlorophyll biosynthesis. Catalyzes the insertion of magnesium ion into protoporphyrin IX to yield Mg- protoporphyrin IX
RIV7116_RS27700	COG1012	belongs to the aldehyde dehydrogenase family
RIV7116_RS27720	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
RIV7116_RS27730	COG1357	PFAM Pentapeptide repeats (8 copies)
RIV7116_RS27730	COG0515	serine threonine protein kinase
RIV7116_RS27735	COG0697	spore germination
RIV7116_RS27745	COG0130	Responsible for synthesis of pseudouridine from uracil- 55 in the psi GC loop of transfer RNAs
RIV7116_RS27760	COG0253	Catalyzes the stereoinversion of LL-2,6- diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso- DAP), a precursor of L-lysine and an essential component of the bacterial peptidoglycan
RIV7116_RS27770	COG0475	glutathione-regulated potassium exporter activity
RIV7116_RS27770	COG1226	(belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family)
RIV7116_RS27780	COG0415	Belongs to the DNA photolyase family
RIV7116_RS27795	COG0614	abc-type fe3 -hydroxamate transport system, periplasmic component
RIV7116_RS27815	COG3264	Mechanosensitive ion channel
RIV7116_RS27815	COG1196	nuclear chromosome segregation
RIV7116_RS27820	COG0667	Aldo Keto reductase
RIV7116_RS27835	COG0405	Gamma-glutamyltransferase
RIV7116_RS27855	COG0037	tRNA processing
RIV7116_RS27880	COG0436	Aminotransferase
RIV7116_RS27915	COG0501	Belongs to the peptidase M48B family
RIV7116_RS27925	COG0173	Aspartyl-tRNA synthetase with relaxed tRNA specificity since it is able to aspartylate not only its cognate tRNA(Asp) but also tRNA(Asn). Reaction proceeds in two steps L-aspartate is first activated by ATP to form Asp-AMP and then transferred to the acceptor end of tRNA(Asp Asn)
RIV7116_RS27950	COG2244	polysaccharide biosynthetic process
RIV7116_RS27955	COG1216	Glycosyl transferase, family 2
RIV7116_RS27965	COG0463	Glycosyl transferase, family 2
RIV7116_RS27965	COG1216	Glycosyl transferase, family 2
RIV7116_RS27970	COG1442	glycosyl transferase family 8
RIV7116_RS27970	COG1216	Glycosyl transferase, family 2
RIV7116_RS27990	COG2148	undecaprenyl-phosphate glucose phosphotransferase activity
RIV7116_RS27995	COG0110	maltose O-acetyltransferase activity
RIV7116_RS28010	COG1408	metallophosphoesterase
RIV7116_RS28015	COG3703	Catalyzes the cleavage of glutathione into 5-oxo-L- proline and a Cys-Gly dipeptide. Acts specifically on glutathione, but not on other gamma-glutamyl peptides
RIV7116_RS28030	COG0382	Catalyzes the prenylation of para-hydroxybenzoate (PHB) with an all-trans polyprenyl group. Mediates the second step in the final reaction sequence of ubiquinone-8 (UQ-8) biosynthesis, which is the condensation of the polyisoprenoid side chain with PHB, generating the first membrane-bound Q intermediate 3- octaprenyl-4-hydroxybenzoate
RIV7116_RS28065	COG2885	chlorophyll binding
RIV7116_RS28105	COG0515	serine threonine protein kinase
RIV7116_RS28105	COG2815	serine threonine protein kinase
RIV7116_RS28110	COG4775	Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane
RIV7116_RS28120	COG1859	Removes the 2'-phosphate from RNA via an intermediate in which the phosphate is ADP-ribosylated by NAD followed by a presumed transesterification to release the RNA and generate ADP- ribose 1''-2''-cyclic phosphate (APPR P). May function as an ADP- ribosylase
RIV7116_RS28130	COG1357	PFAM Pentapeptide repeats (8 copies)
RIV7116_RS28130	COG0515	serine threonine protein kinase
RIV7116_RS28150	COG0816	Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA
RIV7116_RS28180	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
RIV7116_RS28190	COG1104	cysteine desulfurase activity
RIV7116_RS28195	COG0817	Nuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves the cruciform structure in supercoiled DNA by nicking to strands with the same polarity at sites symmetrically opposed at the junction in the homologous arms and leaves a 5'-terminal phosphate and a 3'-terminal hydroxyl group
RIV7116_RS28200	COG0391	Required for morphogenesis under gluconeogenic growth conditions
RIV7116_RS28210	COG0802	atpase or kinase
RIV7116_RS28215	COG0044	hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amides
RIV7116_RS28235	COG3854	ATPases associated with a variety of cellular activities
RIV7116_RS28255	COG0384	phenazine biosynthesis protein PhzF
RIV7116_RS28260	COG0854	Catalyzes the complicated ring closure reaction between the two acyclic compounds 1-deoxy-D-xylulose-5-phosphate (DXP) and 3-amino-2-oxopropyl phosphate (1-amino-acetone-3-phosphate or AAP) to form pyridoxine 5'-phosphate (PNP) and inorganic phosphate
RIV7116_RS28265	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
RIV7116_RS28270	COG0697	spore germination
RIV7116_RS28300	COG0536	An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control
RIV7116_RS28310	COG1619	proteins homologs of microcin C7 resistance protein MccF
RIV7116_RS28315	COG0438	transferase activity, transferring glycosyl groups
RIV7116_RS28330	COG0697	spore germination
RIV7116_RS28350	COG0321	lipoyl(octanoyl) transferase activity
RIV7116_RS28355	COG1544	Required for dimerization of active 70S ribosomes into 100S ribosomes in stationary phase
RIV7116_RS28370	COG0443	Heat shock 70 kDa protein
RIV7116_RS28385	COG0042	Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
RIV7116_RS28420	COG0477	Major facilitator Superfamily
RIV7116_RS28445	COG1968	undecaprenyl-diphosphatase activity
RIV7116_RS28450	COG1968	undecaprenyl-diphosphatase activity
RIV7116_RS28460	COG1555	photosystem II stabilization
RIV7116_RS28465	COG0029	Catalyzes the oxidation of L-aspartate to iminoaspartate
RIV7116_RS28480	COG4243	Vitamin k epoxide reductase
RIV7116_RS28485	COG0434	BtpA family
RIV7116_RS28490	COG0621	Catalyzes the methylthiolation of N6- (dimethylallyl)adenosine (i(6)A), leading to the formation of 2- methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine
RIV7116_RS28495	COG0513	Belongs to the DEAD box helicase family
RIV7116_RS28545	COG2814	Major facilitator Superfamily
RIV7116_RS28550	COG2230	cyclopropane-fatty-acyl-phospholipid synthase
RIV7116_RS28565	COG0156	8-amino-7-oxononanoate synthase activity
RIV7116_RS28600	COG0382	Catalyzes the prenylation of para-hydroxybenzoate (PHB) with an all-trans polyprenyl group. Mediates the second step in the final reaction sequence of ubiquinone-8 (UQ-8) biosynthesis, which is the condensation of the polyisoprenoid side chain with PHB, generating the first membrane-bound Q intermediate 3- octaprenyl-4-hydroxybenzoate
RIV7116_RS28605	COG0003	Pfam Anion-transporting ATPase
RIV7116_RS28630	COG2226	methyltransferase
RIV7116_RS28655	COG0438	transferase activity, transferring glycosyl groups
RIV7116_RS28660	COG0438	transferase activity, transferring glycosyl groups
RIV7116_RS28670	COG2227	3-demethylubiquinone-9 3-O-methyltransferase activity
RIV7116_RS28675	COG1215	transferase activity, transferring glycosyl groups
RIV7116_RS28680	COG1215	transferase activity, transferring glycosyl groups
RIV7116_RS28690	COG2340	Cysteine-rich secretory protein family
RIV7116_RS28715	COG0469	pyruvate kinase activity
RIV7116_RS28735	COG0616	signal peptide processing
RIV7116_RS28745	COG0767	ABC-type transport system involved in resistance to organic solvents, permease component
RIV7116_RS28760	COG0344	acyl-phosphate glycerol-3-phosphate acyltransferase activity
RIV7116_RS28765	COG2264	protein methyltransferase activity
RIV7116_RS28770	COG2890	protein-(glutamine-N5) methyltransferase activity
RIV7116_RS28780	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
RIV7116_RS28780	COG3320	Male sterility
RIV7116_RS28785	COG0407	Catalyzes the decarboxylation of four acetate groups of uroporphyrinogen-III to yield coproporphyrinogen-III
RIV7116_RS28800	COG1408	metallophosphoesterase
RIV7116_RS28805	COG1160	GTP binding
RIV7116_RS28810	COG0619	Transmembrane (T) component of an energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates
RIV7116_RS28815	COG0147	Part of a heterotetrameric complex that catalyzes the two-step biosynthesis of anthranilate, an intermediate in the biosynthesis of L-tryptophan. In the first step, the glutamine- binding beta subunit (TrpG) of anthranilate synthase (AS) provides the glutamine amidotransferase activity which generates ammonia as a substrate that, along with chorismate, is used in the second step, catalyzed by the large alpha subunit of AS (TrpE) to produce anthranilate. In the absence of TrpG, TrpE can synthesize anthranilate directly from chorismate and high concentrations of ammonia
RIV7116_RS28825	COG0325	Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis
RIV7116_RS28830	COG1799	cell septum assembly
RIV7116_RS28835	COG0345	Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline
RIV7116_RS28840	COG4581	dead DEAH box helicase
RIV7116_RS28845	COG4636	protein conserved in cyanobacteria
RIV7116_RS28855	COG0110	maltose O-acetyltransferase activity
RIV7116_RS28945	COG0686	Belongs to the AlaDH PNT family
RIV7116_RS28950	COG0515	serine threonine protein kinase
RIV7116_RS28965	COG0584	glycerophosphoryl diester phosphodiesterase
RIV7116_RS28985	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
RIV7116_RS28990	COG1902	pentaerythritol trinitrate reductase activity
RIV7116_RS28995	COG1733	regulation of RNA biosynthetic process
RIV7116_RS29050	COG0667	Aldo Keto reductase
RIV7116_RS29060	COG4249	Peptidase C14 caspase catalytic subunit p20
RIV7116_RS29085	COG0225	Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
RIV7116_RS29095	COG3266	domain, Protein
RIV7116_RS29095	COG0515	serine threonine protein kinase
RIV7116_RS29100	COG0639	Hydrolyzes diadenosine 5',5'''-P1,P4-tetraphosphate to yield ADP
RIV7116_RS29145	COG1304	FMN binding
RIV7116_RS29150	COG0616	signal peptide processing
RIV7116_RS29215	COG0426	domain, Protein
RIV7116_RS29215	COG1853	conserved protein domain typically associated with flavoprotein oxygenases, DIM6 NTAB family
RIV7116_RS29225	COG0426	domain, Protein
RIV7116_RS29225	COG1853	conserved protein domain typically associated with flavoprotein oxygenases, DIM6 NTAB family
RIV7116_RS29240	COG0778	Nitroreductase
RIV7116_RS29270	COG4572	Cation transport regulator
RIV7116_RS29280	COG2205	protein histidine kinase activity
RIV7116_RS29280	COG4999	Histidine kinase
RIV7116_RS29280	COG3850	Histidine kinase
RIV7116_RS29280	COG3437	response regulator, receiver
RIV7116_RS29285	COG0769	Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan
RIV7116_RS29300	COG0175	sulfate reduction
RIV7116_RS29325	COG2831	hemolysin activation secretion protein
RIV7116_RS29350	COG1054	Belongs to the UPF0176 family
RIV7116_RS29365	COG0225	Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
RIV7116_RS29370	COG1088	dTDP-glucose 4,6-dehydratase activity
RIV7116_RS29385	COG5592	hemerythrin HHE cation binding domain
RIV7116_RS29395	COG2197	response regulator
RIV7116_RS29405	COG3265	gluconokinase activity
RIV7116_RS29410	COG1357	PFAM Pentapeptide repeats (8 copies)
RIV7116_RS29410	COG0515	serine threonine protein kinase
RIV7116_RS29415	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
RIV7116_RS29445	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
RIV7116_RS29450	COG0515	serine threonine protein kinase
RIV7116_RS29450	COG1357	PFAM Pentapeptide repeats (8 copies)
RIV7116_RS29460	COG0154	amidase activity
RIV7116_RS29465	COG0154	amidase activity
RIV7116_RS29470	COG1554	hydrolase, family 65, central catalytic
RIV7116_RS29480	COG0156	8-amino-7-oxononanoate synthase activity
RIV7116_RS29485	COG0632	four-way junction helicase activity
RIV7116_RS29490	COG0561	phosphatase activity
RIV7116_RS29500	COG2376	Dihydroxyacetone kinase
RIV7116_RS29505	COG2335	COG2335, Secreted and surface protein containing fasciclin-like repeats
RIV7116_RS29510	COG4115	mRNA cleavage
RIV7116_RS29530	COG1461	Dihydroxyacetone kinase
RIV7116_RS29535	COG0515	serine threonine protein kinase
RIV7116_RS29535	COG2815	serine threonine protein kinase
RIV7116_RS29550	COG1722	exodeoxyribonuclease VII activity
RIV7116_RS29555	COG1570	exodeoxyribonuclease VII activity
RIV7116_RS29575	COG1262	PFAM Formylglycine-generating sulfatase enzyme
RIV7116_RS29575	COG0515	serine threonine protein kinase
RIV7116_RS29585	COG2268	Band 7 protein
RIV7116_RS29590	COG0689	Phosphorolytic exoribonuclease that removes nucleotide residues following the -CCA terminus of tRNA and adds nucleotides to the ends of RNA molecules by using nucleoside diphosphates as substrates
RIV7116_RS29595	COG0363	glucosamine-6-phosphate deaminase activity
RIV7116_RS29600	COG1716	ATPase activity
RIV7116_RS29640	COG0583	DNA-binding transcription factor activity
RIV7116_RS29645	COG0475	glutathione-regulated potassium exporter activity
RIV7116_RS29690	COG4802	Ferredoxin thioredoxin reductase catalytic beta chain
RIV7116_RS29705	COG0378	Facilitates the functional incorporation of the urease nickel metallocenter. This process requires GTP hydrolysis, probably effectuated by UreG
RIV7116_RS29710	COG0375	protein maturation
RIV7116_RS29730	COG0409	Hydrogenase expression formation protein
RIV7116_RS29735	COG0298	carbon dioxide binding
RIV7116_RS29750	COG0694	Involved in iron-sulfur cluster biogenesis. Binds a 4Fe- 4S cluster, can transfer this cluster to apoproteins, and thereby intervenes in the maturation of Fe S proteins. Could also act as a scaffold chaperone for damaged Fe S proteins
RIV7116_RS29795	COG0811	peptide transport
RIV7116_RS29800	COG0848	biopolymer transport protein
RIV7116_RS29860	COG3321	synthase
RIV7116_RS29860	COG0604	alcohol dehydrogenase
RIV7116_RS29870	COG3321	synthase
RIV7116_RS29870	COG0604	alcohol dehydrogenase
RIV7116_RS29875	COG0318	PFAM AMP-dependent synthetase and ligase
RIV7116_RS29910	COG4607	ABC-type enterochelin transport system periplasmic component
RIV7116_RS29920	COG0614	abc-type fe3 -hydroxamate transport system, periplasmic component
RIV7116_RS29930	COG2207	Transcriptional regulator
RIV7116_RS29935	COG3842	ATPase activity
RIV7116_RS29940	COG0390	transport system, permease component
RIV7116_RS29945	COG2814	Major facilitator Superfamily
RIV7116_RS29950	COG1971	Probably functions as a manganese efflux pump
RIV7116_RS29955	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
RIV7116_RS29960	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
RIV7116_RS29965	COG1120	ATPase activity
RIV7116_RS29985	COG0582	viral genome integration into host DNA
RIV7116_RS30005	COG0438	transferase activity, transferring glycosyl groups
RIV7116_RS30030	COG0500	methyltransferase
RIV7116_RS30040	COG0633	Ferredoxin
RIV7116_RS30045	COG0316	Belongs to the HesB IscA family
RIV7116_RS30050	COG0476	Involved in molybdopterin and thiamine biosynthesis, family 2
RIV7116_RS30060	COG5420	small protein containing a coiled-coil domain
RIV7116_RS30075	COG2710	Component of the dark-operative protochlorophyllide reductase (DPOR) that uses Mg-ATP and reduced ferredoxin to reduce ring D of protochlorophyllide (Pchlide) to form chlorophyllide a (Chlide). This reaction is light-independent. The NB-protein
RIV7116_RS30080	COG2710	Component of the dark-operative protochlorophyllide reductase (DPOR) that uses Mg-ATP and reduced ferredoxin to reduce ring D of protochlorophyllide (Pchlide) to form chlorophyllide a (Chlide). This reaction is light-independent. The NB-protein
RIV7116_RS30085	COG2710	Component of the dark-operative protochlorophyllide reductase (DPOR) that uses Mg-ATP and reduced ferredoxin to reduce ring D of protochlorophyllide (Pchlide) to form chlorophyllide a (Chlide). This reaction is light-independent. The NB-protein
RIV7116_RS30220	COG3845	ABC transporter
RIV7116_RS30235	COG4603	Belongs to the binding-protein-dependent transport system permease family
RIV7116_RS30240	COG1079	Belongs to the binding-protein-dependent transport system permease family
RIV7116_RS30265	COG2223	nitrite transmembrane transporter activity
RIV7116_RS30275	COG3096	Plays a central role in chromosome condensation, segregation and cell cycle progression. Functions as a homodimer, which is essential for chromosome partition. Involved in negative DNA supercoiling in vivo, and by this means organize and compact chromosomes. May achieve or facilitate chromosome segregation by condensation DNA from both sides of a centrally located replisome during cell division
RIV7116_RS30275	COG3264	Mechanosensitive ion channel
RIV7116_RS30285	COG2274	protein secretion by the type I secretion system
RIV7116_RS30370	COG1235	May be involved in the transport of PQQ or its precursor to the periplasm
RIV7116_RS30370	COG0321	lipoyl(octanoyl) transferase activity
RIV7116_RS30385	COG2710	Component of the dark-operative protochlorophyllide reductase (DPOR) that uses Mg-ATP and reduced ferredoxin to reduce ring D of protochlorophyllide (Pchlide) to form chlorophyllide a (Chlide). This reaction is light-independent. The NB-protein
RIV7116_RS30390	COG0582	viral genome integration into host DNA
RIV7116_RS30405	COG0412	Dienelactone hydrolase
RIV7116_RS30425	COG0262	Key enzyme in folate metabolism. Catalyzes an essential reaction for de novo glycine and purine synthesis, and for DNA precursor synthesis
RIV7116_RS30460	COG0480	Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome
RIV7116_RS30485	COG0318	PFAM AMP-dependent synthetase and ligase
RIV7116_RS30505	COG2710	Component of the dark-operative protochlorophyllide reductase (DPOR) that uses Mg-ATP and reduced ferredoxin to reduce ring D of protochlorophyllide (Pchlide) to form chlorophyllide a (Chlide). This reaction is light-independent. The NB-protein
RIV7116_RS30510	COG0582	viral genome integration into host DNA
RIV7116_RS30515	COG1216	Glycosyl transferase, family 2
RIV7116_RS30515	COG0463	Glycosyl transferase, family 2
RIV7116_RS30540	COG0582	viral genome integration into host DNA
RIV7116_RS30600	COG2319	Wd-40 repeat
RIV7116_RS30600	COG1672	PFAM Archaeal ATPase
RIV7116_RS30640	COG1944	ATP diphosphatase activity
RIV7116_RS30700	COG5424	Ring cyclization and eight-electron oxidation of 3a-(2- amino-2-carboxyethyl)-4,5-dioxo-4,5,6,7,8,9-hexahydroquinoline- 7,9-dicarboxylic-acid to PQQ
RIV7116_RS30705	COG1235	May be involved in the transport of PQQ or its precursor to the periplasm
RIV7116_RS30715	COG2133	pyrroloquinoline quinone binding
RIV7116_RS30745	COG1961	COG1961 Site-specific recombinases, DNA invertase Pin homologs
RIV7116_RS30755	COG2906	2 iron, 2 sulfur cluster binding
RIV7116_RS30755	COG0822	iron-sulfur transferase activity
RIV7116_RS30755	COG0694	Involved in iron-sulfur cluster biogenesis. Binds a 4Fe- 4S cluster, can transfer this cluster to apoproteins, and thereby intervenes in the maturation of Fe S proteins. Could also act as a scaffold chaperone for damaged Fe S proteins
RIV7116_RS30765	COG1145	4fe-4S ferredoxin, iron-sulfur binding domain protein
RIV7116_RS30775	COG0582	viral genome integration into host DNA
RIV7116_RS30780	COG0535	radical SAM domain protein
RIV7116_RS30780	COG1433	Dinitrogenase iron-molybdenum cofactor
RIV7116_RS30785	COG0582	viral genome integration into host DNA
RIV7116_RS30805	COG1045	serine acetyltransferase
RIV7116_RS30820	COG0119	Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate)
RIV7116_RS30825	COG5554	nitrogen fixation
RIV7116_RS30830	COG5554	nitrogen fixation
RIV7116_RS30845	COG4771	TonB-dependent receptor
RIV7116_RS30865	COG0714	Associated with various cellular activities
RIV7116_RS30890	COG0587	DNA-directed DNA polymerase activity
RIV7116_RS30900	COG0154	amidase activity
RIV7116_RS30915	COG0263	Catalyzes the transfer of a phosphate group to glutamate to form L-glutamate 5-phosphate
RIV7116_RS30925	COG2179	HAD superfamily (subfamily IIIA) phosphatase, TIGR01668
RIV7116_RS30935	COG0435	Glutathione S-transferase
RIV7116_RS30945	COG1175	transmembrane transport
RIV7116_RS30950	COG0395	ABC-type sugar transport system, permease component
RIV7116_RS30960	COG2010	Cytochrome c
RIV7116_RS30965	COG2010	Cytochrome c
RIV7116_RS31005	COG5002	protein histidine kinase activity
RIV7116_RS31030	COG0222	ribosome binding
RIV7116_RS31075	COG2226	methyltransferase
RIV7116_RS31110	COG0752	glycyl-tRNA synthetase alpha subunit
RIV7116_RS31130	COG2843	Capsule synthesis protein
RIV7116_RS31135	COG1606	tRNA processing
RIV7116_RS31140	COG2205	protein histidine kinase activity
RIV7116_RS31140	COG4999	Histidine kinase
RIV7116_RS31140	COG3850	Histidine kinase
RIV7116_RS31140	COG3437	response regulator, receiver
RIV7116_RS31150	COG0320	Catalyzes the radical-mediated insertion of two sulfur atoms into the C-6 and C-8 positions of the octanoyl moiety bound to the lipoyl domains of lipoate-dependent enzymes, thereby converting the octanoylated domains into lipoylated derivatives
RIV7116_RS31155	COG0745	RESPONSE REGULATOR receiver
RIV7116_RS31160	COG0515	serine threonine protein kinase
RIV7116_RS31160	COG2815	serine threonine protein kinase
RIV7116_RS31175	COG2072	flavoprotein involved in K transport
RIV7116_RS31185	COG1007	ATP synthesis coupled electron transport
RIV7116_RS31195	COG0393	Putative heavy-metal-binding
RIV7116_RS31205	COG0388	Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source
RIV7116_RS31205	COG0171	NAD+ synthase (glutamine-hydrolyzing) activity
RIV7116_RS31215	COG1057	Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD)
RIV7116_RS31240	COG0170	dolichyl monophosphate biosynthetic process
RIV7116_RS31245	COG0759	Could be involved in insertion of integral membrane proteins into the membrane
RIV7116_RS31250	COG2173	Catalyzes hydrolysis of the D-alanyl-D-alanine dipeptide
RIV7116_RS31255	COG0667	Aldo Keto reductase
RIV7116_RS31285	COG0231	Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase
RIV7116_RS31290	COG0511	ligase activity, forming carbon-carbon bonds
RIV7116_RS31295	COG0640	Transcriptional regulator
RIV7116_RS31310	COG0442	prolyl-tRNA aminoacylation
RIV7116_RS31340	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
RIV7116_RS31345	COG1136	(ABC) transporter
RIV7116_RS31385	COG1401	restriction endodeoxyribonuclease activity
RIV7116_RS31400	COG5002	protein histidine kinase activity
RIV7116_RS31410	COG0346	lactoylglutathione lyase activity
RIV7116_RS31415	COG1529	Aldehyde oxidase and xanthine dehydrogenase
RIV7116_RS31420	COG1319	Aerobic-type carbon monoxide dehydrogenase, middle subunit CoxM
RIV7116_RS31425	COG2080	2 iron, 2 sulfur cluster binding
RIV7116_RS31430	COG0534	Mate efflux family protein
RIV7116_RS31435	COG3552	Protein containing von Willebrand factor type A (VWA) domain
RIV7116_RS31455	COG2323	membrane
RIV7116_RS31465	COG3236	hydrolase activity, hydrolyzing N-glycosyl compounds
RIV7116_RS31580	COG3021	interspecies interaction between organisms
RIV7116_RS31600	COG0031	Belongs to the cysteine synthase cystathionine beta- synthase family
RIV7116_RS31630	COG0726	polysaccharide deacetylase
RIV7116_RS31630	COG1649	PFAM Uncharacterised BCR, COG1649
RIV7116_RS31635	COG3842	ATPase activity
RIV7116_RS31640	COG0515	serine threonine protein kinase
RIV7116_RS31645	COG0538	isocitrate dehydrogenase activity
RIV7116_RS31665	COG1846	Transcriptional regulator
RIV7116_RS31675	COG0462	Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P)
RIV7116_RS31680	COG0515	serine threonine protein kinase
RIV7116_RS31680	COG1357	PFAM Pentapeptide repeats (8 copies)
RIV7116_RS31685	COG0132	Catalyzes a mechanistically unusual reaction, the ATP- dependent insertion of CO2 between the N7 and N8 nitrogen atoms of 7,8-diaminopelargonic acid (DAPA) to form an ureido ring
RIV7116_RS31690	COG1473	amidohydrolase
RIV7116_RS31695	COG0625	glutathione transferase activity
RIV7116_RS31715	COG0709	Synthesizes selenophosphate from selenide and ATP
RIV7116_RS31735	COG0668	transmembrane transport
RIV7116_RS31810	COG1741	Belongs to the pirin family
RIV7116_RS31870	COG1651	Required for disulfide bond formation in some periplasmic proteins. Acts by transferring its disulfide bond to other proteins and is reduced in the process
RIV7116_RS31870	COG3004	Na( ) H( ) antiporter that extrudes sodium in exchange for external protons
RIV7116_RS31875	COG4663	Part of the tripartite ATP-independent periplasmic (TRAP) transport system
RIV7116_RS31900	COG4689	acetoacetate decarboxylase
RIV7116_RS31945	COG5002	protein histidine kinase activity
RIV7116_RS31955	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
RIV7116_RS31970	COG0012	GTP binding
RIV7116_RS31975	COG1982	Orn Lys Arg decarboxylase major
RIV7116_RS31985	COG0837	glucose binding
RIV7116_RS31990	COG0406	alpha-ribazole phosphatase activity
RIV7116_RS32000	COG3659	wide pore channel activity
RIV7116_RS32045	COG1309	transcriptional regulator
RIV7116_RS32050	COG2124	cytochrome p450
RIV7116_RS32060	COG3850	Histidine kinase
RIV7116_RS32060	COG5002	protein histidine kinase activity
RIV7116_RS32085	COG1324	tolerance protein
RIV7116_RS32105	COG1819	glycosyl
RIV7116_RS32120	COG0371	Dehydrogenase
RIV7116_RS32125	COG0436	Aminotransferase
RIV7116_RS32130	COG0640	Transcriptional regulator
RIV7116_RS32135	COG0580	Belongs to the MIP aquaporin (TC 1.A.8) family
RIV7116_RS32140	COG0431	NADPH-dependent FMN reductase
RIV7116_RS32145	COG0394	Belongs to the low molecular weight phosphotyrosine protein phosphatase family
RIV7116_RS32220	COG2720	vancomycin resistance protein
RIV7116_RS32225	COG1509	lysine 2,3-aminomutase activity
RIV7116_RS32255	COG2201	protein-glutamate methylesterase activity
RIV7116_RS32265	COG1181	Belongs to the D-alanine--D-alanine ligase family
RIV7116_RS32270	COG0728	peptidoglycan biosynthetic process
RIV7116_RS32275	COG1216	Glycosyl transferase, family 2
RIV7116_RS32280	COG1635	Involved in the biosynthesis of the thiazole moiety of thiamine. Catalyzes the conversion of NAD and glycine to adenosine diphosphate 5-(2-hydroxyethyl)-4-methylthiazole-2-carboxylate (ADT), an adenylated thiazole intermediate, using free sulfide as a source of sulfur
RIV7116_RS32290	COG1442	glycosyl transferase family 8
RIV7116_RS32290	COG1216	Glycosyl transferase, family 2
RIV7116_RS32310	COG0659	secondary active sulfate transmembrane transporter activity
RIV7116_RS32315	COG0589	response to stress
RIV7116_RS32320	COG0659	secondary active sulfate transmembrane transporter activity
RIV7116_RS32325	COG0659	secondary active sulfate transmembrane transporter activity
RIV7116_RS32370	COG0312	modulator of DNA gyrase
RIV7116_RS32375	COG0237	dephospho-CoA kinase activity
RIV7116_RS32380	COG1587	Uroporphyrinogen-III synthase
RIV7116_RS32385	COG0007	Multifunctional enzyme that catalyzes the SAM-dependent methylations of uroporphyrinogen III at position C-2 and C-7 to form precorrin-2 via precorrin-1. Then it catalyzes the NAD- dependent ring dehydrogenation of precorrin-2 to yield sirohydrochlorin. Finally, it catalyzes the ferrochelation of sirohydrochlorin to yield siroheme
RIV7116_RS32395	COG0382	Catalyzes the prenylation of para-hydroxybenzoate (PHB) with an all-trans polyprenyl group. Mediates the second step in the final reaction sequence of ubiquinone-8 (UQ-8) biosynthesis, which is the condensation of the polyisoprenoid side chain with PHB, generating the first membrane-bound Q intermediate 3- octaprenyl-4-hydroxybenzoate
RIV7116_RS32400	COG2226	methyltransferase
RIV7116_RS32405	COG0168	Low-affinity potassium transport system. Interacts with trk system potassium uptake protein TrkA
RIV7116_RS32410	COG0569	domain protein
RIV7116_RS32415	COG2082	Precorrin-8x methylmutase
RIV7116_RS32430	COG0038	chloride channel
RIV7116_RS32435	COG0312	modulator of DNA gyrase
RIV7116_RS32460	COG0390	transport system, permease component
RIV7116_RS32490	COG0523	cobalamin synthesis protein
RIV7116_RS32500	COG2166	iron-sulfur cluster assembly
RIV7116_RS32510	COG0289	4-hydroxy-tetrahydrodipicolinate reductase
RIV7116_RS32535	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
RIV7116_RS32540	COG1937	Protein conserved in bacteria
RIV7116_RS32555	COG0702	epimerase
RIV7116_RS32580	COG0226	Part of the ABC transporter complex PstSACB involved in phosphate import
RIV7116_RS32590	COG0572	uridine kinase
RIV7116_RS32595	COG2003	Belongs to the UPF0758 family
RIV7116_RS32600	COG2148	undecaprenyl-phosphate glucose phosphotransferase activity
RIV7116_RS32610	COG1922	lipopolysaccharide N-acetylmannosaminouronosyltransferase activity
RIV7116_RS32615	COG0438	transferase activity, transferring glycosyl groups
RIV7116_RS32630	COG0438	transferase activity, transferring glycosyl groups
RIV7116_RS32635	COG0463	Glycosyl transferase, family 2
RIV7116_RS32645	COG3206	protein involved in exopolysaccharide biosynthesis
RIV7116_RS32645	COG0489	protein tyrosine kinase activity
RIV7116_RS32660	COG0026	Catalyzes the ATP-dependent conversion of 5- aminoimidazole ribonucleotide (AIR) and HCO(3)(-) to N5- carboxyaminoimidazole ribonucleotide (N5-CAIR)
RIV7116_RS32665	COG0612	Peptidase, M16
RIV7116_RS32695	COG0061	Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP
RIV7116_RS32700	COG0713	ATP synthesis coupled electron transport
RIV7116_RS32710	COG1143	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
RIV7116_RS32715	COG1005	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. This subunit may bind ubiquinone
RIV7116_RS32720	COG0372	Belongs to the citrate synthase family
RIV7116_RS32725	COG2062	phosphohistidine phosphatase, SixA
RIV7116_RS32740	COG0787	Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids
RIV7116_RS32750	COG0784	Response regulator, receiver
RIV7116_RS32755	COG0745	RESPONSE REGULATOR receiver
RIV7116_RS32765	COG0840	transmembrane signaling receptor activity
RIV7116_RS32765	COG2203	Gaf domain
RIV7116_RS32770	COG0643	Histidine kinase
RIV7116_RS32770	COG0784	Response regulator, receiver
RIV7116_RS32770	COG2198	Histidine kinase
RIV7116_RS32775	COG2203	Gaf domain
RIV7116_RS32775	COG0840	transmembrane signaling receptor activity
RIV7116_RS32780	COG0725	ABC transporter, periplasmic molybdate-binding protein
RIV7116_RS32785	COG1118	Part of the ABC transporter complex CysAWTP involved in sulfate thiosulfate import. Responsible for energy coupling to the transport system
RIV7116_RS32825	COG2154	pterin-4-alpha-carbinolamine dehydratase
RIV7116_RS32870	COG1074	ATP-dependent DNA helicase activity
RIV7116_RS32890	COG0542	response to heat
RIV7116_RS32910	COG0608	single-stranded DNA 5'-3' exodeoxyribonuclease activity
RIV7116_RS32910	COG4199	Single-strand DNA-specific exonuclease, C terminal domain
RIV7116_RS32920	COG0367	asparagine synthase
RIV7116_RS32995	COG2821	murein-degrading enzyme. may play a role in recycling of muropeptides during cell elongation and or cell division
RIV7116_RS33000	COG2109	Required for both de novo synthesis of the corrin ring for the assimilation of exogenous corrinoids. Participates in the adenosylation of a variety of incomplete and complete corrinoids
RIV7116_RS33025	COG0120	Catalyzes the reversible conversion of ribose-5- phosphate to ribulose 5-phosphate
RIV7116_RS33050	COG1154	Catalyzes the acyloin condensation reaction between C atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D-xylulose-5-phosphate (DXP)
RIV7116_RS33055	COG0182	Catalyzes the interconversion of methylthioribose-1- phosphate (MTR-1-P) into methylthioribulose-1-phosphate (MTRu-1- P)
RIV7116_RS33065	COG3654	unkown
RIV7116_RS33075	COG0303	'Molybdopterin
RIV7116_RS33090	COG1252	NADH dehydrogenase
RIV7116_RS33100	COG1672	PFAM Archaeal ATPase
RIV7116_RS33100	COG2319	Wd-40 repeat
RIV7116_RS33105	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
RIV7116_RS33150	COG1480	7TM receptor with intracellular HD hydrolase
RIV7116_RS33160	COG0757	Catalyzes a trans-dehydration via an enolate intermediate
RIV7116_RS33170	COG1754	DNA topoisomerase type I activity
RIV7116_RS33170	COG0550	Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone
RIV7116_RS33180	COG0724	RNA recognition motif
RIV7116_RS33200	COG0719	Fe-S assembly protein
RIV7116_RS33205	COG0396	ATPase activity
RIV7116_RS33210	COG0719	Fe-S assembly protein
RIV7116_RS33215	COG0520	Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L- selenocystine to produce L-alanine
RIV7116_RS33240	COG2217	Heavy metal translocating P-type atpase
RIV7116_RS33245	COG5001	Diguanylate cyclase
RIV7116_RS33245	COG1716	ATPase activity
RIV7116_RS33255	COG1090	epimerase
RIV7116_RS33270	COG0316	Belongs to the HesB IscA family
RIV7116_RS33290	COG3349	Catalyzes the conversion of zeta-carotene to lycopene via the intermediary of neurosporene. It carries out two consecutive desaturations (introduction of double bonds) at positions C-7 and C-7'
RIV7116_RS33305	COG1492	cobalamin metabolic process
RIV7116_RS33325	COG2244	polysaccharide biosynthetic process
RIV7116_RS33330	COG0438	transferase activity, transferring glycosyl groups
RIV7116_RS33350	COG1225	Alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen
RIV7116_RS33365	COG1131	(ABC) transporter
RIV7116_RS33375	COG0242	peptide deformylase activity
RIV7116_RS33380	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
RIV7116_RS33410	COG0592	DNA-directed DNA polymerase activity
RIV7116_RS33460	COG0514	ATP-dependent DNA helicase (RecQ)
RIV7116_RS33485	COG0557	exoribonuclease II activity
RIV7116_RS33545	COG2203	Gaf domain
RIV7116_RS33545	COG5001	Diguanylate cyclase
RIV7116_RS33545	COG4251	negative regulation of phosphorylation
RIV7116_RS33545	COG3706	GGDEF domain
RIV7116_RS33660	COG5002	protein histidine kinase activity
RIV7116_RS33675	COG0703	Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate
RIV7116_RS33680	COG3903	Transcriptional regulator
RIV7116_RS33680	COG2319	Wd-40 repeat
RIV7116_RS33685	COG3266	domain, Protein
RIV7116_RS33685	COG0515	serine threonine protein kinase
RIV7116_RS33755	COG0588	phosphoglycerate mutase activity
RIV7116_RS33760	COG5002	protein histidine kinase activity
RIV7116_RS33760	COG0784	Response regulator, receiver
RIV7116_RS33760	COG2205	protein histidine kinase activity
RIV7116_RS33795	COG2203	Gaf domain
RIV7116_RS33805	COG0667	Aldo Keto reductase
RIV7116_RS33825	COG4251	negative regulation of phosphorylation
RIV7116_RS33830	COG4251	negative regulation of phosphorylation
RIV7116_RS33950	COG4251	negative regulation of phosphorylation
RIV7116_RS33960	COG0860	N-Acetylmuramoyl-L-alanine amidase
RIV7116_RS33960	COG3409	Peptidoglycan-binding domain 1 protein
RIV7116_RS33970	COG0784	Response regulator, receiver
RIV7116_RS34055	COG3852	Histidine kinase
RIV7116_RS34075	COG2319	Wd-40 repeat
RIV7116_RS34075	COG3903	Transcriptional regulator
RIV7116_RS34085	COG2319	Wd-40 repeat
RIV7116_RS34085	COG1672	PFAM Archaeal ATPase
RIV7116_RS34100	COG4932	domain protein
RIV7116_RS34240	COG2319	Wd-40 repeat
RIV7116_RS34240	COG4249	Peptidase C14 caspase catalytic subunit p20
RIV7116_RS34270	COG2203	Gaf domain
RIV7116_RS34270	COG3706	GGDEF domain
RIV7116_RS34270	COG4251	negative regulation of phosphorylation
RIV7116_RS34270	COG5001	Diguanylate cyclase
RIV7116_RS34285	COG0161	adenosylmethionine-8-amino-7-oxononanoate transaminase activity
RIV7116_RS34290	COG2843	Capsule synthesis protein
RIV7116_RS34310	COG3420	alginic acid biosynthetic process
RIV7116_RS34315	COG3420	alginic acid biosynthetic process
RIV7116_RS34320	COG1672	PFAM Archaeal ATPase
RIV7116_RS34320	COG2319	Wd-40 repeat
RIV7116_RS34365	COG2110	phosphatase homologous to the C-terminal domain of histone macroH2A1
RIV7116_RS34370	COG2911	Protein conserved in bacteria
RIV7116_RS34370	COG1361	Conserved repeat domain
RIV7116_RS34370	COG3266	domain, Protein
RIV7116_RS34375	COG2815	serine threonine protein kinase
RIV7116_RS34375	COG0515	serine threonine protein kinase
RIV7116_RS34385	COG0515	serine threonine protein kinase
RIV7116_RS34385	COG4991	sh3 domain protein
RIV7116_RS34385	COG3064	Membrane
RIV7116_RS34390	COG0515	serine threonine protein kinase