ST40_RS26710 NONE ST40_RS00020 NONE ST40_RS26715 NONE ST40_RS26720 NONE ST40_RS26725 NONE ST40_RS26730 NONE tkt NONE ST40_RS28760 NONE ST40_RS28765 NONE gap 4499 .. 4514 + -4 -2.76189 CGACACGGCCGTGGC GATG-GC AAA GCTCATC TGATTCCCTGCCTTC 43 7 ST40_RS00035 NONE ST40_RS00040 NONE ST40_RS00045 NONE ST40_RS28770 NONE ST40_RS28775 NONE ST40_RS00050 NONE ST40_RS00055 7351 .. 7373 + -10.4 -2.70979 GCCGGTTTAAAACTC GCCGGGCGGC GGT GCCGACCGCC TCAATTTAATTCGAA 66 31 fba NONE ST40_RS00065 NONE ST40_RS28790 NONE ST40_RS00070 NONE ST40_RS26740 NONE efp NONE ST40_RS26745 NONE ST40_RS00080 12374 .. 12397 + -12.4 -3.14211 AACCGCCCACACCGG GAGACGGGCC CCAC GACCCGTCTC TTCATGAGAAGGCCT 76 130 ST40_RS26760 NONE ST40_RS00085 NONE ST40_RS26765 NONE ST40_RS00090 NONE ST40_RS00095 NONE ST40_RS00100 NONE ST40_RS26770 15751 .. 15764 + -5.9 -3.15249 CACCGCTTGCAGTCA GCCTC TGCA GGGGC TTCCTGAAGCCTATG 52 72 ST40_RS26780 NONE ST40_RS00110 17900 .. 17954 + -6.5 -2.79183 AGGGCATAGGCTGTG TCGTCGTC-CATGGC-GCTGGTCGT ATAGGCA ACGACCGGCAGCGAAGTGGTGACGA TGTCCTCGGCCTGAC 52 205 ST40_RS26785 18724 .. 18735 + -3.6 -4.38171 TTGTGTGATCCTCAG CGTG GCAA CGCG TTTTCATATGATCTG 66 274 ST40_RS28840 20200 .. 20221 + -2.9 -4.08216 CGTGTCACGGTAGTT GAT-GGCGTG GTC CGCGCCGAGC TTTTGCACCGCCTCG 58 426 ST40_RS00130 NONE ST40_RS26800 NONE ST40_RS00135 NONE ST40_RS26805 NONE ST40_RS26810 NONE ST40_RS00145 NONE ST40_RS26815 NONE ST40_RS26820 26191 .. 26225 + -8.4 -3.25719 TGGCCAGCACCTCTT CCATGCCGCCCGTCGA CAG TCGGTGGCCGGCAACG TTGATGATGTCATCG 62 149 ST40_RS00160 NONE ST40_RS28880 NONE ST40_RS28885 NONE ST40_RS26840 NONE ST40_RS28890 NONE ST40_RS00165 NONE ST40_RS26845 NONE ST40_RS00175 NONE purE NONE ST40_RS26850 NONE ST40_RS00185 NONE ST40_RS26855 NONE ST40_RS26860 NONE rpsU NONE ST40_RS28895 NONE ST40_RS00200 36595 .. 36609 + -2.8 -3.54424 CTCAAGTACCTTCCA CCTG GTTAGCG CAGG TTTGCCAAACTCGAA 49 398 ST40_RS28910 NONE ST40_RS28915 NONE ST40_RS28920 NONE ST40_RS26885 NONE ST40_RS28925 NONE ST40_RS00225 NONE ST40_RS28930 41577 .. 41589 + -3.3 -2.91264 TCGACTTCGGCATCC CCGAC CCG GTGGG TATCTGCATGAAACC 42 368 ST40_RS00240 NONE ST40_RS28940 NONE ST40_RS26910 NONE ST40_RS28945 NONE ST40_RS29745 NONE ST40_RS26915 NONE ST40_RS00245 NONE ST40_RS28950 NONE ST40_RS26920 48220 .. 48232 + -3.4 -3.31461 GAAACCGGCCAGATT CATC ATGTC GATG TTCTGAACGTCCGTC 47 17 ST40_RS28960 NONE ST40_RS26925 NONE ST40_RS28965 NONE ST40_RS28970 NONE ST40_RS26930 NONE ST40_RS00265 NONE rnk NONE ST40_RS26940 NONE pyk 51533 .. 51550 + -10.5 -4.7373 AACCGGATGACGAAA GGCGGCT TCAA GGCCGCC TTTTTCATGCCGTGC 100 61 ST40_RS26955 NONE ST40_RS26965 NONE ST40_RS00300 NONE traA NONE traF NONE hisN NONE ST40_RS26970 NONE ST40_RS29000 NONE ST40_RS26975 NONE ST40_RS29005 58471 .. 58489 + -6.6 -3.17723 ATCTCCAGTTTGTTC CGCCAGCG CCG TGCTGACG TTGGATTGAAGATGC 56 210 ST40_RS00320 59205 .. 59226 + -17.3 -5.28683 CAATCGCATCATCGG GGCGCCTGG GAAA CCAGGCGCC TTTTTTGATGTTACT 100 60 ST40_RS29020 NONE ST40_RS26990 NONE ST40_RS26995 61783 .. 61813 + -3.9 -3.86524 TTGACCTGCGGCAGG GCGAGCGGAC-CAC GCAT GTCAGACCGCTTGC TTTCTGCCAGCCTCT 56 486 istB 62867 .. 62910 + -6.6 -2.54896 GACCAGATTGCCGCA GTTGCGGCC-GTCTGAAGCCT ATC AGGCTTCCGGCAGGTCGCGCG TAAGTTCGGTCAGAG 51 172 ST40_RS29035 NONE ST40_RS29045 NONE gltB NONE ST40_RS27030 NONE cobA NONE ST40_RS00355 NONE ST40_RS27040 NONE ST40_RS29070 NONE ST40_RS27045 NONE ST40_RS27050 NONE ST40_RS27055 NONE ST40_RS27060 73164 .. 73184 + -3.9 -2.83343 AGGCGTCGGCAATCA GGCCTGACA GGT TTTCAAGCC TCTCATCCTCAATGT 43 17 nirJ NONE ST40_RS00375 NONE ST40_RS27070 NONE ST40_RS00380 NONE ST40_RS29090 NONE ST40_RS27075 NONE ST40_RS27080 NONE cueR NONE ST40_RS27085 NONE ST40_RS00385 NONE ST40_RS29100 78072 .. 78088 + -3.7 -3.6761 GCGAGGTTGCCAGTT CCTTGAA CGC TTCAACG TATTTGTTGGCAACG 53 430 ST40_RS29140 NONE ST40_RS29145 NONE ST40_RS29150 86713 .. 86724 + -5.8 -3.36273 ATCCCCTGGCTGGCA GCCT CGTA AGGC TTCATCTTGCGGCGC 56 44 ST40_RS29155 NONE ST40_RS29160 NONE ST40_RS27130 NONE ST40_RS29165 NONE ST40_RS29170 NONE ST40_RS29175 NONE ST40_RS29180 NONE ST40_RS00440 91196 .. 91209 + -2.3 -3.11738 CCGAAGAACATAATA CACTC CAAC GTGTG GTTATTTGTTCCCAA 42 73 ST40_RS29185 NONE ST40_RS27155 NONE ST40_RS29190 NONE ST40_RS27160 93552 .. 93563 + -7.2 -2.70932 CGACCGGAAGGTCAG CCGC CTGG GCGG TGGTTGCAGCAGCAG 55 146 ST40_RS27165 NONE ST40_RS29200 NONE ST40_RS00455 NONE ST40_RS00460 NONE feoB 96298 .. 96316 + -4.4 -2.8294 TCAACGTGGCTTCGG GCGCTGCT CCA AGATGCGC TCCTTCTGCGAAGTC 45 2 ST40_RS29225 NONE dhaL NONE ST40_RS00470 NONE dhaL NONE ST40_RS29230 NONE ST40_RS00475 NONE ST40_RS00480 NONE ST40_RS27185 101530 .. 101545 + -4.6 -2.57564 GTTCGATGGCACGAA CCTGTG TGTG CACCGG CTTGTAGGCCCCTGC 44 156 ST40_RS27190 102557 .. 102578 + -2.1 -2.72344 CATGACCATCGCACC GAC-GGCACC GAT GGCGCCAGCC TGGTTCACGGTAGCG 39 71 ST40_RS27195 NONE ST40_RS27200 105309 .. 105320 + -3.6 -2.77899 TCATCCCACAGTTCC TGGC CGCC GCCG TACTTGATCCAGGCG 43 58 ST40_RS27205 NONE ST40_RS27210 NONE ST40_RS00500 NONE ST40_RS00505 107911 .. 107923 + -3.3 -2.50113 AGCTCTACAAGGTCG CGCAG GAT CTGGG ATTGCTGGACTGATC 40 0 ST40_RS00510 108754 .. 108766 + -3.3 -2.72152 GCCGTCCGGGCCTAT CGCGT CAA ACGCC TGGGTTTGTAATCAG 41 2 ST40_RS29265 NONE ST40_RS29270 NONE ST40_RS00520 NONE ST40_RS29275 112061 .. 112079 + -13.1 -5.38497 CACGACAAACGGAAA CGGCGGC CTTGA GCCGCCG TTTTTTGCTTTGCCT 100 32 ST40_RS29280 112677 .. 112700 + -3 -4.19817 AAAACCTCTTCCAGG CGAGCGGCAA TATG TTCCTGCGCG TTTTCCATGAGTAAA 60 40 ST40_RS29285 113052 .. 113062 + -2.4 -3.24232 TAGCGTAACCAGTTT GCCG TCG CGGA TATCTTTGGACACAA 43 104 ST40_RS29290 NONE ST40_RS27245 NONE ST40_RS29295 NONE ST40_RS27250 NONE ST40_RS00550 NONE lgt NONE ST40_RS27255 NONE ST40_RS29305 NONE ST40_RS27260 NONE ST40_RS29310 NONE ST40_RS00555 120259 .. 120271 + -7.7 -2.78384 GGCCCTTTGACCGGC CCAGA CCG TCTGG TCTGCTCGCGGCCAC 55 31 ST40_RS00560 NONE ST40_RS29315 NONE ST40_RS27270 NONE ST40_RS00565 NONE ST40_RS29320 NONE ST40_RS27275 NONE ST40_RS27280 NONE ST40_RS27285 NONE ST40_RS29325 NONE ST40_RS29330 NONE fba NONE ST40_RS29335 NONE ccmI NONE ST40_RS00590 NONE ST40_RS27300 NONE ST40_RS27305 128667 .. 128679 + -6.9 -3.78934 TCACGACAAGAAGAT GCCGG CCA TCGGC TTCTTCTCCAACCAC 63 405 ST40_RS00630 NONE ST40_RS29400 138522 .. 138546 + -4.1 -2.62545 CAGCTGTTTCGTATG CGCGGGATTGC AGA GCCGTTCAGCG AGTTTTTCGCGTCTG 42 70 ST40_RS27350 NONE ST40_RS27355 NONE ST40_RS27360 NONE repA NONE ST40_RS27365 NONE repB NONE ST40_RS27370 NONE ST40_RS00665 NONE repC NONE ST40_RS27375 NONE ST40_RS27380 NONE ST40_RS00670 NONE ST40_RS27385 NONE ST40_RS29430 NONE ST40_RS27390 NONE ST40_RS00680 NONE ST40_RS27395 NONE ST40_RS29435 NONE ST40_RS29440 NONE ST40_RS29445 150705 .. 150719 + -8.5 -2.6072 TCACGTCAAAATAGC CGCCG ACAAC CGGCG TCCCTTCCTTCAGTC 56 241 ST40_RS27420 151486 .. 151504 + -3 -2.66692 TCATTGCCATGAGTG CCGCAACC ACC GCTTTCGG GTTGTCGTGCTGATA 40 89 ST40_RS29460 NONE ST40_RS27425 NONE ST40_RS29465 152495 .. 152520 + -2.4 -3.03038 GCCACGCTTTCGCGG GAGGCGAGGA ACGCGA TCTCCGCCGC TGTGATTTCCGTCTC 42 13 ST40_RS29470 NONE merF NONE ST40_RS27430 NONE merA NONE ST40_RS27435 NONE ST40_RS29485 NONE ST40_RS27440 NONE ST40_RS27445 NONE ST40_RS29490 NONE ST40_RS27450 157408 .. 157420 + -7.7 -2.9176 CATTTGAGATTGAGA CGCTT GCC AAGCG TGTCTGCCTGCGCTT 56 78 ST40_RS29500 160181 .. 160208 + -17 -2.53715 CATATGAACACAAAA AGGCCCGGAAGC GGAT GCTTCCGGGCCG GTTGATCGTGATGGC 90 62 ST40_RS27490 162024 .. 162046 + -6.8 -2.88999 ATTCCTCCGGGAAGG TGCCGGTCCC TTT GCGGCCGGCC TGTCATGTCTCCCCC 53 349 ST40_RS27495 NONE ST40_RS29520 164213 .. 164238 + -5.4 -3.21099 TCGAAAAGTACTGAT GGGCAATGGT CAGGTC GCCATTGACC TTGGTGATCAACAGG 52 26 ST40_RS29525 NONE ST40_RS29530 NONE ST40_RS29535 NONE ST40_RS29540 NONE lspA NONE ST40_RS29550 168821 .. 168837 + -7.9 -3.15544 CGCTCATCAGCAGCA GGACGCG TTC CGCTTCC TTGATCCGAATGGGC 57 495 ST40_RS29555 170113 .. 170135 + -6.2 -4.07568 AATAATCGTATTGCG TTCCCGGCTC GAA GAGCGGCGAA TTTTCGACGGCAAAG 67 257 ST40_RS27530 NONE ST40_RS00760 NONE ST40_RS00765 NONE ST40_RS27535 NONE ST40_RS27540 NONE ST40_RS27545 NONE ST40_RS27550 178152 .. 178166 + -2.8 -3.17486 GCGCCCGCTGCGATT GACAAC AAA GTTCTC TTGGTGAGCATTCTT 45 111 ST40_RS27555 NONE urtB NONE urtC NONE urtD NONE urtE NONE ST40_RS29660 NONE ST40_RS27580 NONE ST40_RS29625 NONE ST40_RS27585 185152 .. 185162 + -6.8 -3.55071 CCCAACGCTCTGAAA CACG ACA CGTG TTTCGGGCGCTATCG 60 12 ST40_RS29630 NONE ST40_RS00820 NONE ST40_RS29635 NONE ST40_RS27590 NONE ST40_RS00825 NONE ST40_RS29640 NONE ST40_RS00830 NONE repA NONE ST40_RS00835 NONE repB NONE ST40_RS00840 NONE ST40_RS00845 NONE ST40_RS29655 NONE repC NONE ST40_RS00850 NONE ST40_RS00855 NONE ST40_RS00860 NONE ST40_RS27610 NONE ST40_RS00865 NONE ST40_RS00870 195042 .. 195057 + -5.4 -5.27938 ACCTGTCAGGTTGGT GTCTGT GTGA ACAGGC TTTTTATTTGGGCCT 90 80 ST40_RS27620 195936 .. 195948 + -6.9 -3.1634 AGAACTGGTTTTGAG GTGGG TTT CCCGC TTAGATGCTTTCAGC 56 341 ST40_RS27625 197282 .. 197298 + -9.4 -4.08546 TTGGACTTTCGGCGA GCGGGT CTCTC ACCCGC TTTATCGTTACTCAT 76 345 ST40_RS27635 201342 .. 201355 + -2.3 -4.99665 CGCAGACCAACCCAA CCCGT CAAC ACCGG TTTTGATTTTTTTTG 75 448 ST40_RS27650 203109 .. 203123 + -4.2 -3.34398 GTTCGGATCGGTGCT TCGAGA GCA TCGCGA TATTTGAGCCAGAGA 51 191 ST40_RS27670 NONE ST40_RS27675 NONE ST40_RS00940 NONE ST40_RS27680 NONE ST40_RS27685 NONE ST40_RS00945 NONE ST40_RS27690 NONE ST40_RS27695 NONE ST40_RS00950 NONE ST40_RS27700 NONE ST40_RS27705 NONE ST40_RS00955 NONE ST40_RS27710 NONE ST40_RS27715 219192 .. 219227 + -5.2 -2.71924 TGCGAGGCAGGGCGA AGTGCCCCGCAGGCAG TTTG CTGCCCGTTGGCCACA CTTTAGGGGAGCGTG 47 7 ST40_RS27720 NONE ST40_RS27725 221021 .. 221037 + -2.1 -4.08216 TCCAGGCACCGTCCT TACCGGT AAC ACCGGCC TTTTCCAGCGCATCG 57 69 ST40_RS27730 223691 .. 223710 + -4.9 -3.05384 GCTTGCCGACAGCCT CGATGCC GCCGCG GGCAACG TTGGCTACCAGAGAA 47 21 ST40_RS01015 226877 .. 226900 + -8.8 -3.23853 ACTCTTGAAGCATCT GCC-GGAGGCT TGA AGCCGCCCGGC TCTTCCTTAAACGCG 65 13 ST40_RS01040 232303 .. 232334 + -12.4 -2.7806 CATCGCTCTGATCAA CCTTGAAGACCGCCC TCA GGGCT-TCTTCAAGG GTTTCGGCCTTTCGG 72 379 ST40_RS01050 234019 .. 234032 + -2.3 -3.14284 ACACAAGTGAGACTT CCGAC TGAT GTCAG CTTTCTTCATCGACA 43 18 ST40_RS27795 NONE ST40_RS27800 NONE ST40_RS01055 NONE ST40_RS01060 238701 .. 238737 + -15.9 -3.80746 CTCGGCACCACTATT CGGACTGGGCAAAGGCT TGA AACCCTTGCTCAGTCCG TCTTGTTTTTGAAAG 100 47 ST40_RS27825 NONE ST40_RS01070 NONE ST40_RS27830 NONE ST40_RS27835 NONE ST40_RS01075 NONE ST40_RS27840 NONE ST40_RS27845 NONE ST40_RS01095 NONE ST40_RS01100 NONE ST40_RS27850 NONE ST40_RS27855 NONE ST40_RS01105 NONE ST40_RS27860 NONE ST40_RS01110 249565 .. 249577 + -4.7 -3.42374 GCGCACCCGAGAACG GGGCC GAC GGACC GTTTTATTGATGGAG 51 388 ST40_RS01115 NONE ST40_RS27870 NONE ST40_RS27875 NONE ST40_RS01120 NONE ST40_RS27880 NONE ST40_RS01125 NONE ST40_RS01130 NONE ST40_RS27885 NONE ST40_RS01135 NONE fsa 255973 .. 256002 + -3.6 -2.62184 GATGACGGTTCGGGC GTTTCCAATGGA GAGACA TCCATTGGAGGA TAGTATGCGCCCGCA 42 118 ST40_RS01145 NONE ST40_RS27895 NONE ST40_RS27900 258091 .. 258112 + -3.6 -3.53224 AGCCGTAGGTGTGCG GCTCCTGC GCGTTG GCAGTGGC TTTCAGCACGGAATC 51 44 ST40_RS27905 258683 .. 258697 + -2.8 -2.64099 GTCATTGGTGGTGTT GCTC AGATCGG GAGC GTTCTCATAGCCCGC 40 1 ST40_RS27910 259408 .. 259422 + -7.8 -2.60075 GCACTTCACCTTCCA GCACCG GAG TGGTGC GTTGATTGAGGGCGG 52 368 ST40_RS27920 260873 .. 260887 + -7 -3.73775 ACAGCGGTGCACCGT CGGCCG CGA CGACCG TTTCGTAGCCGTGGG 63 88 ST40_RS27935 264626 .. 264668 + -17.8 -4.11484 AATAACGAGAGGCCG CGTTCAGCAGGCGCGGAGC AAGTGA GCTCCGCGCCTGCTGC-TG TTTTCCGGAATTGAA 100 517 ST40_RS27950 266825 .. 266839 + -2.8 -4.07568 GTTAATACTGCGATT TGGACG GCA TGTTCA TTTTCCGACAGCCAC 58 525 ST40_RS01185 NONE ST40_RS01190 268322 .. 268347 + -16.1 -3.53444 CCTCAACAAAAAAGA GGCCGGATCGG TAAA CCGAACCGGCC TTTCAGGGGAGGTAA 100 63 ST40_RS01205 NONE ST40_RS01210 273936 .. 273972 + -15.1 -4.57569 CAGGCGGCTGATCAG GTTCAGGGCTGCCGGAA CCA TTCCGGCAGCCCTTTCC TTTTTGAAAAAATCA 100 30 ST40_RS01215 NONE ST40_RS01220 NONE ST40_RS01225 NONE ST40_RS01230 NONE ST40_RS01235 280062 .. 280090 + -2.1 -3.01924 CAGACCATTCCGTCA GCAGCGGCACGAG GTC CCCGCGCTTCAGC TCTTCCCGCACCATG 41 224 ST40_RS01245 281819 .. 281829 + -5.4 -3.95435 ATTTGATATCCAAAC CCTT CTG AAGG TTGTGTTTTCAGCAG 63 40 ST40_RS28035 NONE ST40_RS01250 NONE ST40_RS28040 NONE ST40_RS01255 NONE ST40_RS28050 NONE ST40_RS01260 NONE ST40_RS01265 NONE ST40_RS28055 NONE ST40_RS01270 NONE ST40_RS28060 NONE ST40_RS28065 292120 .. 292130 + -6.8 -3.15544 CGACATCCCGCTCCG GCTG CGC CAGC TTGATGCCCATGGCA 54 116 ST40_RS28070 293208 .. 293252 + -6.3 -3.68222 GTCACCATGTTGGTG GCGC-CGGGGCCGATGGACG AGGTGA CGGCCATTGCCCGTGTGCGC TTCTTGGCCTTGGCA 60 115 ST40_RS28075 NONE ST40_RS28080 NONE ST40_RS28085 295869 .. 295894 + -3.2 -3.90241 TTTCTTCCACCACAT CCATGATGCG CGCCTC CGCATCAGGC TTGTTCTGCTTGGTC 56 413 ST40_RS28095 301589 .. 301638 + -3.5 -3.11192 CCTCCGTGATCGAAC CGGATGGCTTCCT-CTGCGTCGAT GTC ATCGGCGGAGCAGGCATCAATCCA TTGGCTCATGGTGTC 45 46 ST40_RS28100 NONE ST40_RS28105 304904 .. 304926 + -9.1 -3.33261 CACCGCCAGCCATCA GGTCCGCGA TCTGT TCGCGGGTC TTCTCGCCCTTGCGG 63 190 ST40_RS01380 314728 .. 314748 + -3.1 -2.82104 ATATCCGAGCAGTCG ACCTCGGTG CCT CACTGTGGA TAGTTGGTGGTGTTT 41 198 ST40_RS01385 NONE ST40_RS01390 316131 .. 316148 + -2.8 -2.64794 AATACTCGCACCAAG TAATAG TTCCAT CTATTA TGGTATAGAGTTCCC 40 77 ST40_RS01395 NONE ST40_RS01400 NONE ST40_RS28170 319884 .. 319899 + -3.2 -4.17657 GCTGAACCGGGTGCA CCGGAA GAAG TTCCTG TTTTCCGGTCTCCTG 58 355 ST40_RS28175 320831 .. 320853 + -9 -2.72511 GCCGCCGGCCGGTCA GGCTGCCCGC GCT GAGCGCAGCC CTTTAGGGCGGTGCG 60 127 ST40_RS28180 321518 .. 321529 + -2.2 -3.28924 AGATAGGGACCGAAC TGTC TCGC GACG TTCTGAACCCAACTC 44 13 ST40_RS01445 329155 .. 329186 + -23.1 -3.80018 CTCCTGAAAAACAAA GTTCGGCCGGGGC CTTCGT GCCCCGGCCGAAC TTGTTCATGTCTGCA 100 43 ubiG NONE ST40_RS01500 345129 .. 345140 + -5.8 -4.18494 GCTGCACAAACCTGC GGCA CAAA TGCC TTTTACGTAAGAATC 68 53 ST40_RS01505 345910 .. 345938 + -13.2 -4.72729 CCCTACACCGTTTAA CCTGCTTCATCC GCCCG GGCTGAAGCAGG TTTTCGTTTTGGTTG 100 58 ST40_RS28285 NONE ST40_RS28290 NONE ST40_RS01535 NONE ST40_RS28295 NONE ST40_RS28300 351976 .. 351986 + -4.6 -3.21416 TCATCCCTGCGCCCT TGGC AAT GCCG TTGATCGTCACGGTA 49 51 secA NONE ST40_RS28325 NONE ST40_RS01565 NONE ST40_RS28330 NONE ST40_RS01570 NONE ST40_RS28335 NONE ST40_RS28340 NONE ST40_RS01575 359781 .. 359794 + -2.4 -3.14211 CCTGGAAAGGTGGTT TTCG AACCGG CGAA TTAATCGCAAACGCT 42 8 ST40_RS28345 NONE ST40_RS01580 361061 .. 361076 + -2.5 -3.48024 CGACTTTTCTGAAAG CC-GCC CGTCC GGCAGG TATTTCCTCATCCCA 47 29 ST40_RS01585 NONE ST40_RS28355 NONE ST40_RS01590 363220 .. 363235 + -6.1 -4.10164 GAACTTGCTGTCCTC GGTCG AACCCA CGACC TTTGTGTCGTCATAC 67 247 ST40_RS28375 366373 .. 366386 + -8.1 -3.65199 GTGAAAAGGCTCAAG GCCAG AATT CTGGC TTTGACTGACAAATT 68 129 ST40_RS01605 367572 .. 367603 + -8.8 -2.87132 TAGGGAGGGTCCCCG GAAGCCGTCATCGGA AAA TCCGGTCA-GGCTTC TGTATCCAGCACCAG 62 38 ST40_RS28390 NONE ST40_RS01615 NONE ST40_RS28395 371125 .. 371147 + -3.5 -2.90904 GCAATTCGATCGTGG TTTCGGT CTGCCCACC ACCGAAA TGCTTGTGATTGTCA 44 104 ST40_RS28400 NONE ST40_RS01630 NONE ST40_RS01635 NONE ST40_RS28405 NONE ST40_RS01645 NONE ST40_RS28410 NONE ST40_RS01650 NONE ST40_RS01660 NONE ST40_RS28415 NONE ST40_RS01665 NONE infC NONE ST40_RS28420 377319 .. 377329 + -6.8 -3.33661 CCGGCATGTCACATC CAGC GCC GCTG TCTTGTCATTACCTG 58 29 ST40_RS01680 NONE ST40_RS28425 NONE ST40_RS01685 379375 .. 379386 + -7.2 -3.23216 GCGATCCACCGTAAC GCCG TGCT CGGC TTCGTAGTCATCAAG 54 440 ST40_RS28450 NONE ST40_RS28455 383853 .. 383875 + -7.6 -3.06183 AGCGTCACGCCGCCG TCCGGCATGG CGG CAACGCCGGA TTCGATCCCCGTCCC 56 342 ST40_RS28465 385588 .. 385603 + -4.6 -3.04322 TGCCGGAAATAGCGG CCCTTG CCAC CCAGGG TGTTCAAGGCTTCGG 47 49 ST40_RS28470 386734 .. 386755 + -6.5 -3.21218 CCGCCTGCTCAAGGC GCCG-CCGGG CAA TCCGGATGGC TTCCTCGTCCGGGAT 56 94 ST40_RS28475 NONE ST40_RS28480 NONE ST40_RS28485 390493 .. 390531 + -3 -3.55622 GCCGCAGGCGTCAAA GTCATCGTT-CGGCACG TCGGTC CGGGCCGGAACGGAGCC TTTGACGACGTTGAA 49 60 ST40_RS28490 391703 .. 391721 + -8.8 -4.00486 TAAGGCGGATGTTTC GGTGCTGC AGT GCAGCACA TTATTGTGTTGTAAC 76 383 ST40_RS01750 393191 .. 393206 + -4.7 -4.65895 AACACTTCTTCGCGG GCGAT CGGCAT ATCGC TTTTTACATCCGCAA 73 362 ST40_RS28520 397015 .. 397040 + -3.2 -3.73775 ATGAAACTCGATGCC GGTTCCCGCA AATTTA TGCGTGAAGC TTTCATGCGACTGCA 54 432 ST40_RS28530 399397 .. 399414 + -7.7 -3.15544 GGACCGACATCCTTC TGCCCTT TGGC AAGGGCG TTCATGCCGCTGGAC 57 163 ST40_RS01785 NONE ST40_RS01790 NONE ST40_RS28540 NONE ST40_RS01795 NONE ST40_RS01800 NONE ST40_RS01805 407952 .. 407975 + -11 -4.32402 GCGAACATCTCCAAA GGCGTGTCTC GGAA GAGGTACGCC TTCTTTTCATTCAGG 93 58 ST40_RS01820 NONE ST40_RS28570 NONE ST40_RS01835 NONE ST40_RS28575 NONE ST40_RS01840 NONE ST40_RS01845 NONE ST40_RS28580 NONE ST40_RS01850 NONE ST40_RS01855 NONE ST40_RS28590 NONE ST40_RS01860 NONE ST40_RS28595 NONE ST40_RS01865 NONE ST40_RS28600 NONE ST40_RS01870 NONE ST40_RS28605 NONE ST40_RS01875 NONE ST40_RS28610 NONE ugpC 424288 .. 424298 + -8.2 -3.75105 GCTTGGAACGATGAA CGGC GAT GCCG TTGTTGATGACTTCA 68 319 ST40_RS28620 425182 .. 425214 + -7.6 -2.71712 CCATCTGAGCTACAG CG-GCGTTCTCCGGC AGAT GCCGGGCATCGCGCG ATTTGGCGCGGACAC 55 15 ST40_RS28625 425572 .. 425585 + -3.7 -3.74747 CGATGGCTTTGCATC CGCCG ATTT CGGAG TTTCCTCAACCTTGG 54 20 ST40_RS28630 NONE ST40_RS28635 NONE ST40_RS28640 427133 .. 427144 + -5.8 -3.34501 AGAGCGATCAAGCCC TGCG ACAG CGCA TTGTAGCCCTTGTCT 56 161 tsaD 432516 .. 432535 + -2.9 -3.30124 CCTGTTAGGAAACTT CAG-CCTT CCAAC AAGGACTG TTCTGAGAAATGCGC 45 100 ST40_RS01920 NONE ST40_RS01925 NONE ST40_RS01930 434585 .. 434595 + -4.6 -3.84017 CGACATAGGCACAAG CCGG CAC CTGG TTCTCTTTCCGCTTG 58 65 ST40_RS01935 NONE ST40_RS01940 NONE ST40_RS01945 436511 .. 436523 + -4.1 -2.53911 TCCCACTTCCTCTTT TTGCA GCT TGCGA TAGGTTAGCCGTTCA 42 96 ST40_RS01950 437867 .. 437884 + -12.7 -4.59424 TTGGATTAAGAGTGA CGCCGGT TCCG ACCGGCG TTTTCATTTGGATTT 100 136 ST40_RS01955 NONE ST40_RS01960 439478 .. 439500 + -6.8 -3.08173 GCTCGGCTGATCCTT GCCGGAGCCG TCC TGGAACCGGC TTCAATCACGTTGCT 54 31 ST40_RS28700 NONE ST40_RS28705 NONE ssrS NONE leuB NONE ST40_RS28715 NONE ST40_RS01970 NONE ST40_RS01975 NONE ST40_RS28720 442050 .. 442078 + -2.5 -2.62735 TGTCGGTGTACCGTG CATG-GCCAG ATAGTCCGGG CTGGCACATG TGATCTCCGCGATCT 38 83 ST40_RS28725 NONE ST40_RS28730 NONE ST40_RS01985 NONE ST40_RS01990 443663 .. 443686 + -13.8 -2.73771 TGAACCCGCGTCACT CGCCCGGCTG GAAA CAGCCGGGCA CTTTCCGACATCTGG 79 43 ST40_RS02005 NONE ST40_RS02010 445571 .. 445597 + -12.9 -3.0792 ATGCAGAAAAGGAAA GGCCCGGCTGC ATAAA GCGGCCGGACC TTCGCTCAGGTCTTG 81 49 ST40_RS02020 449363 .. 449380 + -2.5 -3.98282 CTGACGGAACGAAAC GCTGCCC AGAC GGCCCGC TTTGGTTCCTATCCG 54 106 ST40_RS02025 NONE ST40_RS02030 NONE ST40_RS02035 452424 .. 452434 + -2.4 -4.58395 GACGACGGACCGTGG ACCG GGA CGGC TTTTTGCCACCTGAC 65 1 ST40_RS02040 NONE ST40_RS02045 453953 .. 453971 + -17.4 -4.78237 GATCGACAGTTCAAA CGGGCGCC TCG GGCGCCCG TTTTCTTGTGGCCTG 100 39 ST40_RS02050 NONE ST40_RS02055 456213 .. 456228 + -9 -2.94551 ACGGCATATCTCCTA TTCCCC ATCT GGGGAA TATATCGGTACTTTT 62 324 ST40_RS02065 NONE ST40_RS02070 458877 .. 458891 + -4.2 -3.75863 CCGCGCGGCGGACTG TCAGAC CTG GGCTGA TTTCCTGCGCGTTTT 55 425 ST40_RS02110 464992 .. 465012 + -18.3 -4.67038 TTATCTTGTCAGGAA GGCGCGGAC ATC GTCCGCGCC TTTTCGTTTTCGGCA 100 61 ST40_RS02115 466623 .. 466645 + -4.2 -3.28497 TATATCGTCCGACTA GAAAGGGT CATTGAA ACTCTTTC TTCAGTTTCCCCTAC 49 129 ST40_RS02120 468188 .. 468217 + -15.1 -4.12599 GTCCCTGCCAGACAA AAAAACCCGGTGC CAAG GCACCGGGTTTTC TTTTGACGGGTTATT 100 72 mtnK NONE mtnA NONE ST40_RS02150 NONE ST40_RS02155 476211 .. 476243 + -11.3 -3.42056 TGACAAGCATCCAGC GTGGCCGGGACCGG GGAATA CCG-TCCTGGCCGC TTATCCATTCCAGAT 74 167 ccrA 483608 .. 483634 + -22.4 -5.34655 AGCCTCATGCAGCCT GACCAGCCCGTG TCT CACGGGCTGGTC TTTTCTTTTTGATTA 100 125 ST40_RS02195 485310 .. 485322 + -4.7 -3.32844 CGGCGGCGGATCATA GGGAG GAT CGCCC TTGTAGACTGGCCCG 49 197 ST40_RS02205 486725 .. 486739 + -11.4 -2.71681 GAAGATCTTCATGTC CCGCAG GAT CTGCGG TCGTTCCGGCCGTTC 65 344 ST40_RS02215 488558 .. 488578 + -3.2 -3.01712 CGTTTGCACTCGGTG GCCGAATC CGTAT GACTTGGC TATTCCCGCAACAAG 43 44 xth 489455 .. 489465 + -8.2 -3.15544 CCATCCTTCGAGACA GCGC TTC GCGC TTCCTCAGGATGAGG 60 61 ST40_RS02230 491343 .. 491357 + -4.2 -4.27861 GAGTTGTGCCTGAAC TTCAGG CCA CCAGAA TTTTGGGTGTCTCTT 66 43 ST40_RS02240 492807 .. 492852 + -9.5 -3.05384 GTTTCCTTTCAGTCT CGACGTCACCCTGGACGGGCC AAAC GGCCTATCCGGGCCGTTGTCG TTGCGTAAAAACAGC 67 110 rlmN 494271 .. 494292 + -17.3 -4.96848 CTGCTGAACGAAAAA CGGCGGCTC ACTG GAGCCGCCG TTTTTATCTGAGCAG 100 52 ST40_RS02260 NONE ST40_RS02265 NONE ST40_RS02270 500206 .. 500218 + -2.6 -3.89614 TCGCAGGGGCTTCTC CCGG CTGAA CTGG TTTGTGGGAATTGAG 54 324 ST40_RS02295 506435 .. 506454 + -16.4 -4.64861 TTCCAGAAAAAAGAG CGGGCCGG GAAA CCGGCCCG TTTGTTTTAAAAAAA 100 48 typA 510347 .. 510366 + -12.1 -4.72272 GAACGAACCAGAAAA GCCCGGG CAATGT CCCGGGC TTTTTACTGAGGGCC 100 49 ST40_RS02315 NONE ST40_RS02320 NONE ST40_RS02325 513082 .. 513095 + -4.5 -3.24747 CTGACTTGCTTGTGT GCACCG CAG CGG-GC TTAATCCTCTCCGAC 49 132 ST40_RS02330 NONE ST40_RS02335 515064 .. 515083 + -2 -4.01603 TCATTTTCGAGGATG CGCCGG AAAAGGCA CAGGCG TTTGCTGTTTCCCTC 54 54 iaaH 516649 .. 516701 + -10.4 -2.90075 CTGTCTGGACTTTAT CGGAAGTCCTGGCGCACACTCCCG CAAAA CAGGAGTGTGCGCCATGAAAACAG TGTCCTTCACCCAGA 68 72 ST40_RS02345 517399 .. 517412 + -3.7 -3.61715 ACCTTTCAAGGGTTC GGGAG ACTG CCCCC TTGTTGCGACGAATG 53 130 nudI 518028 .. 518044 + -2.1 -2.71712 GCTCCCTCCTCAACA ACGGCCT TCC AGGCCAA CTTTGCGCCGCAAAC 39 132 ST40_RS02355 519172 .. 519193 + -7.9 -3.30443 GTCAGGCGCAGCCGT CTCGGCCGT GGCA ACAGCCGGG TTGGTGTCGTCCTCA 59 487 rpmB 523366 .. 523393 + -17.8 -2.9675 AAAGAACCTTTTCAG GACGCCCAATCG ATAT CGGTTGGGCGTC TGTCGTTATGAGGTG 95 94 ST40_RS02380 524563 .. 524576 + -9.5 -3.01712 CAGCCACGAGCTTGC CGGCC AACG GGCCG TCTTCCGGCCCGGCC 60 509 ST40_RS02405 529264 .. 529290 + -3.1 -4.94262 ACAAACAGCAAATTA CATA-AGCTGCC TCAC GGTAGTTATATG TTTATTTTTAGTATA 74 74 ST40_RS02425 533217 .. 533233 + -2.1 -3.53444 GGCGGGTTATCAACG GGACAAG TTT CAGGTCC TTTGCGAAGGCATAC 47 56 xerD 534212 .. 534239 + -21.4 -3.65201 CGCGAAACACAAAAA GGCCAGCCTTCC TGAG GGAAGGCTGGCC TTGTTCGCCGTGTTA 100 62 ST40_RS02440 538316 .. 538370 + -4.2 -3.65314 TTGAAGGCTAGCTTC G-CCTGTTTC-AGACGCGCAGGCGCT TTCTC AGCGTCCGTGCGGCTCGGCGCAGGGC TTGTTCAAGCTTCAG 55 30 ST40_RS02460 542935 .. 542955 + -4.7 -3.57263 TGGCGATTTCGATGT TGCCGAG GGTCATG TTCGGCA TTTGCGGATGGGGAT 54 198 ggt 545209 .. 545231 + -16.2 -5.71712 AGCCTTCGCATTATC CCGGGCGCAC TTC GAGCGCCCGG TTTTTTTATATGAAG 100 50 ST40_RS02490 547359 .. 547375 + -2.1 -2.73243 CGCTGATCCACTTTC CCTTCCG GAC CGGCAGA CTTTCGCCGGTCCGT 39 35 ST40_RS02495 NONE ST40_RS02510 551153 .. 551173 + -3.2 -4.32857 CCTGTAACGGTCACC CACTTTCG GCAGG CGAAGGCG TTTGTATTTCGCGCG 62 34 trxA NONE ST40_RS02520 NONE ST40_RS02525 553626 .. 553637 + -4.4 -3.05647 GTCTTCCCATGCCAA CTCA ATCT TGAG TGTGTATGATTGCGC 47 371 ST40_RS02530 555311 .. 555321 + -3.2 -3.28791 CTCAGCGTCAAACCG GTAG TTG CTGC TTATGAAAAAACCCT 45 314 ST40_RS02555 NONE ST40_RS02560 NONE ST40_RS02565 561755 .. 561789 + -2.2 -2.73124 GGTTGCCGACCCCAA GTG-ACCT-CGAGCGC TCGCC GCTTTCGCAGGTCCAC GTTTAAAACGTGCGA 39 47 ST40_RS02570 562368 .. 562393 + -8.9 -3.28712 GCAGGAACCGGCGGA TCGGCCGGAGC GCGG GCTCCGTCAGA TTGTAGAGAACCCGG 63 110 ST40_RS02580 563598 .. 563622 + -16.5 -5.64421 CCGCAATGTTCAAGA TGCTGCCGCAC CAC GTGTGGCAGCA TTTTTTGTTTCCGGT 100 52 ispG NONE pdxY NONE ST40_RS02625 572996 .. 573015 + -2.8 -3.48063 CCTGAGGATGGCGAT CT-GGGTGT AAT GCGCCCGAG TTGTCCATTTCCCTG 49 16 queC NONE queD NONE queE 575235 .. 575246 + -5.8 -3.38581 ACAGGGAAGCGAAAG CCCA ATTT TGGG TCTTTGCGAGTTCAT 56 304 queF 576224 .. 576248 + -2.8 -3.29947 TTCGATCACCTGGGT GGTCACCATCT CGAA AGACGG-GGCC TTGCTGTCGTAGATC 44 446 acnA 582963 .. 582980 + -14.1 -5.81412 CAGGTGAGATCGAAG CGGGCCC TGAG GGGCCCG TTTTTTTTGGATAAC 100 58 ST40_RS02665 583737 .. 583753 + -2.9 -4.39002 ATAAACCCGTCATGC GCCGATT TTT GATCGTC TGTTTTTTATTGATC 64 124 ST40_RS02670 NONE ST40_RS02675 NONE ST40_RS02680 586724 .. 586737 + -3.1 -3.12668 CGTCCAAACGACTGC T-CGCC TTT GGCGCA TTGGCTCTGGCCATC 43 47 ST40_RS02685 NONE ST40_RS02690 NONE ST40_RS02695 NONE ST40_RS02700 NONE ST40_RS02705 591906 .. 591928 + -10.5 -4.6902 TTGACTGATCGCCCT GCAACGCGG GCAAA CCGCGCTGC TTTTTGAAATTGTCC 100 33 ccmA NONE ccmB NONE ST40_RS02720 594251 .. 594264 + -2.3 -2.86747 CAGCGGCAGCCACGG CTCAG CCTG CGGAG TAATTCTCATGGATC 40 9 ccmD NONE ST40_RS02730 NONE ST40_RS02735 596198 .. 596220 + -3.3 -3.52204 AAAATCTTCGACTGA CTGAATCGG ACCCG CCGCATCAG TTCATTTACCCATAA 49 67 ST40_RS02740 NONE ST40_RS02745 NONE ST40_RS02750 599331 .. 599345 + -2.8 -3.25823 ATGATGGGTGTCGCG GCCT TCAATAC AGGC TTGATCTGAGACGCA 45 2 ST40_RS02755 NONE ST40_RS02760 NONE ST40_RS02765 NONE ST40_RS02770 604196 .. 604208 + -2.6 -3.85698 CCGCGATGCGGGCGA GGTC GTCCA GGCC TTTCTCCCAGAGAAA 54 475 ST40_RS02780 606016 .. 606037 + -13 -2.85351 CAACCATGAACAAGA GCGGCGGT CTGTGA ACCGCCGC TGTGGTGTGGCCAAA 76 12 ST40_RS02785 607349 .. 607362 + -3.7 -3.06696 ATTGAGGGAAAGGAC GCCGC CAGG GCGGA TATATTGGCCCAGCG 43 229 ST40_RS02795 NONE ST40_RS02800 609674 .. 609686 + -9.1 -4.19817 TCAGTGAAAGCACAG CAGCC TGA GGCTG TTTTGGGTCGATCCA 80 18 ST40_RS02820 614580 .. 614593 + -2.3 -2.65264 GGTCAACAGACTTTT CCTGG TGCG CCATG TCCTCTGCGTGCTCG 38 302 ST40_RS02835 616404 .. 616415 + -5.8 -3.72576 GATATCCGCCGCAAG CTGG AGGT CCAG TTTGCTGAGACCGCC 60 100 ST40_RS02845 617245 .. 617269 + -5.5 -2.70932 TAAGGACCTGATGAC GAGCGCCTGAC AAA GCCAGGCACGC TGCTTGACCACACGA 47 16 ST40_RS02850 618089 .. 618109 + -10.4 -3.82202 AAGATCTCGACATTG C-GGGGCCG CGGG CGGCCCCAG TTGTCTTTCAGGATC 76 479 ST40_RS02860 NONE ST40_RS02865 NONE map 620602 .. 620617 + -3.9 -3.63744 TGCAGATCGAGCAAC GCGGC ATCGAA GTCGC TCTTTTGAACGAGAC 51 268 ST40_RS02880 622763 .. 622773 + -4.6 -2.93901 GGCCTCACGCAACGA CCGG AGA CTGG TGTCCTTGCTCGACT 45 95 ST40_RS02890 624706 .. 624722 + -2.2 -3.09327 TCTCATCGCTGAAGC GCTGCT TCCAC ATCAGC TCTTCGGTAAAATCA 41 372 ST40_RS02900 626478 .. 626508 + -8.3 -3.02144 AAGCGCCCGTGCATT GCTCGCAAGCGTGCC GGA GGC-CGCCTGC-AGC TCTTCCGCCGCATGC 56 88 ST40_RS02925 NONE ST40_RS02930 635006 .. 635028 + -2.6 -4.15044 CTGAATTGATCTTGG CTATCCGG TTCAGCT CCGGGCAG TTTGTTAAGAAGGGG 56 311 ST40_RS02935 635951 .. 635979 + -4.6 -2.98823 ATATGTTGAGGGAGT TGTGTTGCATGCG CGAT TGCATGC-GCACG TCTATCTAGAAGGGG 46 152 ST40_RS02940 636817 .. 636835 + -13.1 -5.24129 TGAACAAACGGAAAA GCCCGGC CTTGT GCCGGGC TTTTTTGTGACCGCA 100 53 dctP 640523 .. 640568 + -22 -2.94144 ATCTGACCCTTCCTC CCACCGGACGGTAGATGGCA CCTCCC TGCCGTCTGCCGTCCGGTCG TCCTTTCGATCGGCA 100 35 ST40_RS02960 NONE ST40_RS02965 NONE ST40_RS02970 643708 .. 643718 + -2.4 -4.09739 GCGGCAAGGCGCCAA CGCC TGA GGCC TTTTGACAAGGTTCG 56 19 ST40_RS02975 644500 .. 644515 + -9 -3.96068 ATCGGCGGCCTGGCG CGCCAA ATCG TTGGCG TTCTTGTTGGCCTGG 73 126 ppa 645684 .. 645715 + -8.6 -4.8622 GGACGAAAACAAAAA GGCCTCCCGAGTGT CGCA AGACGCAGGAGGCC TTTTTCATTGCAAGG 95 53 ST40_RS03010 648713 .. 648728 + -3.2 -3.7795 CTTTCCGCCAGCAAG TACGCC GGGC GCCGTA TTTGATCGAATTTGA 54 270 ST40_RS03020 649469 .. 649483 + -7.1 -4.82901 AGCCTGCAAACAAAG GCGCA AATTG TGCGC TTTTTCTGGACAAGC 81 114 ST40_RS03025 651393 .. 651409 + -4.3 -3.16154 ACGGCCCGTCCGGAC GGAACCT GAA GGGCTCC TTGCGTGTGATCTTG 48 328 ST40_RS03035 652913 .. 652930 + -4.1 -3.99405 GCGGCCTATCAATTT CTGATGT ACGC ACCTCAG TTTATGCTACCTTCC 58 135 ST40_RS03040 653691 .. 653715 + -2.7 -3.53012 CTACCGGAAAACGCT TTATTGAGCGG ATC CCGCGCAGCGA TTTCACCGGCAGGAG 49 19 ST40_RS03050 656226 .. 656273 + -10.5 -2.61383 CGAGGTAAAAATCAT TGGCGGGACTGCCGTTGAGAGC CATCA GC-CGGATCGGCAGTCCCGTCG CTTCTGCCTCAGCCT 60 170 ST40_RS03065 658612 .. 658632 + -11.2 -3.68341 GCCTCGAAACCTCAG GAAAGCCC TGCCC GGGCTTTC TTCTTCCCTCACGTT 79 54 ST40_RS03070 659144 .. 659171 + -13.4 -3.03419 CAAGTTCCGTGTCCG GGGCCCGTAGTG GCAA CACTGCGGGCCA ATTTCGTTTGCCGCT 84 66 ST40_RS03075 660383 .. 660399 + -7.2 -2.71712 GTAGGACGCGGGAAG GGCGGC TTTGC GTCGCC ATTTCGGACGAACGG 55 37 ST40_RS03090 NONE ST40_RS03095 NONE ST40_RS03100 NONE ST40_RS03105 667848 .. 667866 + -13.2 -2.89564 CTCATAGGCGGCATG GAACGGCA CGA TGCCGTTC TGTCTGAAATAGGCC 75 329 ST40_RS03115 669284 .. 669300 + -9.3 -4.00756 TCGAGCGTCGGCCAC GCACCCG TCA CGGGCGC TTGTTTCCTCAAGTG 76 41 ST40_RS03125 670958 .. 670968 + -4.6 -3.90291 TTCCACCAGCTCGGC CGTG ATG CGCG TTTCCTTGCGGCGGT 59 254 phnG NONE phnH 672756 .. 672769 + -3.8 -2.82491 CCGTTCCACCCGCAT CCTC AAAGCG GAGG TCTGATCCATGTATG 43 7 ST40_RS03145 NONE fosX NONE ST40_RS03155 NONE phnK NONE phnL 676777 .. 676814 + -5.4 -3.66999 GAGGAAAGGCTTGCA GACGGGCGGAAACTGT CACAGA AAAGTCACCGCCCGCC TTTAGGTCACTCCCT 58 51 ST40_RS03170 NONE ST40_RS03175 NONE phnN 679682 .. 679705 + -4.5 -4.2586 GATGACATTCCTGCA AGCGGTGCGC ATCAG GCG-ACCGCA TTTCTCTTCGTCTGA 65 347 ST40_RS03195 680943 .. 680964 + -15.9 -2.69151 AAGAACATCGGCACA TCCGGTCGG GCGT CCGACCGGA TACTGTCTGCAGAGG 85 68 ST40_RS03200 NONE ST40_RS03205 682661 .. 682683 + -6.2 -3.5525 CACGGCAAAAGCAAA GGTGCGGC CCCAAAC GCAGCACC TTTGCGCCAATGTGT 57 103 ST40_RS03235 NONE ST40_RS03240 692649 .. 692660 + -4.4 -3.60296 AGACCCGATACCCCG GCAA GACA TTGC TTTAACGTGACCCTG 52 51 ST40_RS03245 693689 .. 693715 + -15.1 -3.97444 AGGTGGACACAAAAA GGCCGCCCGGA ATGGA TCCGGACGGCC TTTGGTTGATGCTGT 100 236 ST40_RS03255 NONE ST40_RS03260 701504 .. 701518 + -4.9 -3.72576 CGACGCGTTCCGCGG CGGCG ATTGA CGCTG TTTCCTGCCAAAGCC 55 16 ST40_RS03265 702162 .. 702172 + -8.2 -3.60884 CTGCCCGTGGCGACC GGGC GGG GCCC TTGTGGTGTTTTGGC 65 126 ST40_RS03270 703137 .. 703158 + -13.7 -3.965 CGCGAAAATCGACGA GGGCCTGGA GAAA TCCGGGCCC TTATTCGTTTTGGCA 100 60 ST40_RS03275 704185 .. 704204 + -15 -5.44119 CAAGTAACTCTGACG GGCGGACC TTCC GGTCCGCC TTTTTTTGAGCTCCG 100 54 ST40_RS03290 NONE ST40_RS03295 707508 .. 707522 + -3.4 -4.34223 TGCGCAGGCAAAGGG CGCCTG CGC CGGACG TTTGTTGGTTGCCTT 62 104 ST40_RS03310 NONE ST40_RS03315 NONE acuI 711377 .. 711409 + -15.6 -2.87051 GCCTGAGACAATTCC TTGCCTGGGCGGAC AATGG GTCTGCCCGGGCGA ATTTCGTCATGGAAA 87 35 ST40_RS03335 713997 .. 714007 + -4.6 -4.07568 CGCACACCGGTCTCC GCGG CCA CTGC TTTTGCCGCGGCGGA 62 54 rpmI NONE rplT 714865 .. 714884 + -11.4 -5.4833 ATCCGATTTGAAAAA CGCGGTTC ATTC GAGCCGCG TTTTTTGTTGCCTGG 100 54 ST40_RS03350 716533 .. 716577 + -2.1 -2.7555 GTCGCGCCAGTCTGC CTGCGCCGGGGCCTGCCAACG CTTTT CTTTTGCAG-C-CCGGTGTGG TCCTGTTCCCGTGTC 39 81 ST40_RS03355 717167 .. 717181 + -2.1 -2.91695 GGACGGACCTCTTTT TCATG CATCA CGTGA TCATTTACGACTGCG 40 43 ST40_RS03360 717945 .. 717982 + -5 -4.36914 AAAGTGTCCGATTTT GCGCC-A-CTGCATTAAC GATT GTTAATGCGGATCGGCGG TTTTCTGCGGACAAA 69 145 ST40_RS03365 718467 .. 718489 + -11.2 -5.72207 CCACTGGAGACCTTC AACCCGGGGC ATT GCTCCGGGTC TTTTTTTGGTTTGCC 100 69 ST40_RS03370 719119 .. 719152 + -16.9 -3.06796 ACGCTCAGGCTTCTA CACGCAGGAAACCGGC CAG GCCGGTTTTCTG-GTG TTCGATCACATGACA 100 52 ST40_RS03385 722960 .. 722970 + -2.4 -3.61654 ACGCCCGTTCAGACC GGCC CCA GGGC TTTGCGATAGATATC 50 223 ST40_RS03400 NONE phbB 726415 .. 726432 + -9.8 -5.28778 TCAATCACAGGAAAA GGCGCC CGTTGT GGCGCC TTTTTTATGGGTGCT 100 51 ST40_RS03415 728454 .. 728475 + -2.9 -2.96692 GCTCGCCAGAAGCTC GAAGGTTGC GCCG GAAACCATC TGTATGGTGATCATC 40 518 ST40_RS03440 732268 .. 732281 + -9.5 -2.70774 GGAAGCGGTCACTCC GCCGG TGCG CCGGC CTTGTCCTTGGCATG 64 141 ST40_RS03460 NONE metW 737552 .. 737572 + -2.5 -4.65916 CGGGAATGAAGACAG GCCGC AGAACGCGGAA GCGGC TTTTCTTGCCGTCGA 68 304 gloB NONE ST40_RS03480 739532 .. 739550 + -3 -2.50381 ATCCCGTCCCGGAAA TCCAGTTG ATC CAGCCGGG ACTTTTCATGACTTC 40 44 ST40_RS03485 740458 .. 740468 + -8.2 -3.62591 GTTCTGGCGGAGCCG GCGC ACA GCGC TTTACCGATTGTGAA 68 482 ST40_RS03490 741534 .. 741556 + -9.1 -4.07568 TGCGGTCCTCATCCC CCTGCTGCC TGTCC GGCAGGAGG TTTTCCAGCGCAGGC 76 258 ST40_RS03520 748693 .. 748730 + -8.3 -2.5294 TAAGACTGTTCGGGC CGGCTCAGGCGTGGA TCACCATC TCCGCGCCAAGGCCG ATGTTCTGAAGAATC 56 38 ST40_RS03530 750124 .. 750161 + -8.5 -2.57344 GTAACCGGTAATCGG CGTATT-TCTTGGGCATG AGC CTTGCCCAAGACATTGCG ATTCTCAAACAAATC 56 37 ST40_RS03535 750959 .. 750981 + -4.7 -2.74144 GTCATTGCCGGGCCA GACCCGGCA ATCCA TGCCGTGAC CTTTCCGCATGAAAC 45 340 ST40_RS03560 760330 .. 760354 + -13.5 -2.74784 GGAAATCGCGTTATG GGGCCGGCAGT TCC GCTGCCGGCCG TGGCTTTTCAGCGGT 79 47 ST40_RS03565 762152 .. 762174 + -14.8 -3.37513 ATTGCCCAAACAAAA ACGCGCCGGA AAA TCCGGCGCGC TTCATGTTCAGATGT 95 71 ST40_RS03595 771451 .. 771462 + -3 -3.61764 GCAAGCGCCCCATGG CAAT CGCG ATTG TTTCAGCGTTCATGC 49 416 ST40_RS03605 772928 .. 772940 + -9.1 -3.10513 CGCTGAGATCCTCGG CCGGA ATA TCCGG TGTCTATTGACGTAT 63 3 ST40_RS03610 NONE ST40_RS03615 NONE ST40_RS03620 NONE ST40_RS03625 778842 .. 778874 + -2.8 -2.66977 GTGGGTTTTCAGATC CTACATGGA-G-CTCC AAC GGAGATATCCATGCAG CATTTTTCCCTTCTC 40 128 ST40_RS03630 780231 .. 780245 + -6.4 -3.12351 GACCAGCAGACCATC GGCGTT CGA AATGCC TTCCCTGTGCCGCGC 52 392 ST40_RS03640 NONE ST40_RS03645 NONE ST40_RS03650 782304 .. 782316 + -3.3 -3.0497 AGTACTATCACAGCT TGGCT CAT GGCCG TGTTGCGCCTACTCT 43 127 ST40_RS03655 783993 .. 784016 + -19.6 -3.36823 CCCGACAAAGCGAAA CGGCCCCGGA ACTT TCCGGGGCCG TTGAATTTTCAGCGC 100 58 ST40_RS03675 NONE ST40_RS03685 789061 .. 789071 + -4.6 -3.53811 TTGCACCGCAGCGGC CTCG TTC CGGG TTTCCAGCGCCTCGA 52 137 ST40_RS03695 791419 .. 791444 + -11.9 -5.75342 CCGTTCAAACTGAAA GACCGTCTCAA CGCA TTGGGGCGGTC TTTTTTTTCAGACCG 100 82 ST40_RS03720 NONE hpt 796479 .. 796501 + -6.2 -3.71848 CTGACGGCAACACAG GAGAGTGAGC ATG GCTCGCATTC TTCTTACTGAAGACG 60 18 ST40_RS03730 796915 .. 796930 + -11.8 -5.28942 TTCCGAAACCCAAGA CCCCGC TTCG GCGGGG TTTTTGTTTGGGCTG 100 56 ST40_RS03755 803957 .. 803973 + -15.1 -2.66517 CCCAGACCTGGAATG CGGCGCG ACT CGCGCCG GTCTTCTTCCTGGGT 76 137 ST40_RS03805 811815 .. 811830 + -6.8 -5.72118 TTTTCGTGGGTTTCA CGTTCC GAAA GGGACG TTTTTTCTGTTTTTT 100 67 ST40_RS03810 812601 .. 812630 + -2.7 -3.28712 AGATAGAAGACCAGG TATCGCAGGTGCC CCAT GGCATCCTCGACA TTATCACCGAACACC 44 421 tesB 817072 .. 817125 + -13.4 -2.52896 GAGGGCCTTAAGGCC CGTCTCGAAGGATGGGC--CACTTGT TCCT GTGGGTGCCGCCCATCTTTCGAGACG TCGCTTCGCGGCTCC 78 105 ST40_RS03860 NONE ST40_RS03865 NONE ST40_RS03870 NONE ST40_RS03875 NONE ST40_RS03880 NONE ureC NONE ST40_RS03890 NONE ST40_RS03895 NONE ST40_RS03900 NONE ureG NONE ST40_RS03910 828250 .. 828281 + -14.4 -3.26844 TAGCTCCGGACAGAG CGAAGCCCGCAACT TTTC AGCTGCGGGCTCCG ATTTTCGTTGATGAC 95 38 ST40_RS03920 830955 .. 830971 + -2.9 -2.71924 CCGACTAAAGTACCA AGTCTAG GTT CTGGACG CTTTGAGGGGCCATA 41 115 acs 833039 .. 833058 + -15 -5.28315 CTAAGAAACGCAAAA GGCTCGCC GGGT GGCGAGCC TTTTTTCAGTTTTGT 100 56 ST40_RS03960 841438 .. 841457 + -5 -3.60098 TTCTGCACCCGCGCC CGTTCC ACCTCGAA GGAACG TTTGCCGTCCCGGGT 55 365 ST40_RS04010 850584 .. 850613 + -7.8 -3.38991 CTTCAAAACGGAAAA CCACCGCCGG CGTGACCTTA CCGACGGTGG TCTTGTTCGGGCAAT 61 93 ST40_RS04025 853045 .. 853061 + -2.9 -2.60813 GGACGCGATTTCTGG TGACAGT CCG GCAGTCA ATCTTTCAGGAAATC 40 110 leuS NONE ST40_RS04035 NONE holA 857860 .. 857880 + -5.4 -4.58395 CTGGGCGATCTTTTC GGTCTC-GC GGAC GCTGAGGCC TTTTTCGACGATCAG 76 524 ST40_RS04095 NONE ST40_RS04100 NONE ST40_RS04105 NONE coaE 872202 .. 872218 + -9.3 -2.64735 CCCATCCTTCGAGAC ACCCGGC AAT GCCGGGC TCCTCTGAATGAAGT 59 152 dnaQ 873408 .. 873427 + -9.3 -3.07029 TGTTGTGTCCGTGCA GGTCCTG GTGAAG CAGGACC TCTTCCGCCTCTTTC 60 349 ST40_RS04130 875884 .. 875900 + -15.1 -4.323 TTCTGGAACAAAAAA GGCGGCC AAC GGCCGCC TTTTGCATGTTTGGA 100 104 ST40_RS04150 879493 .. 879516 + -6.7 -3.57144 TCGTCGCGATTGATT GCGG-C-GGCC CTCA GGCCAGACCGC TTTCCACATAACGCA 60 41 ST40_RS04165 881385 .. 881400 + -3.9 -2.90688 CCAATGCGTTGTCCG TCGCC AAGTCA GGCGG TGTCTAGGCTCCTTC 44 3 ST40_RS04180 887945 .. 887969 + -9.2 -3.90112 TACTTGGTTGGATTA GCGGCTCCCCG ATCC CGGGGCGC-GC TTTGCTTGCCCGGGA 73 51 ST40_RS04185 888537 .. 888552 + -4.6 -4.13767 GACAGGGGTGGCGGT GGCGTG CAAT TGCGCC TTTTCGCGTCGCGAC 62 178 ST40_RS04190 NONE trpB 890535 .. 890568 + -14.7 -4.09685 TTCGAACGGAACCCT GGAAAACCGCGTATC GAAA GGTGCGCGGTTTTTC TTTTGGCAGCTCCGG 100 49 ST40_RS04200 891324 .. 891336 + -7.7 -4.82901 TCGTTTTACAATAGG TGCAC GCA GTGCA TTTTTCTAGGCGCAA 86 339 ST40_RS04210 891685 .. 891695 + -3.2 -3.35597 CCGCTGACCGGTCTG GGTT CGG AGCC TGTTTCAACGCTCCG 47 34 trpA 892649 .. 892667 + -8.8 -2.53392 AAGAACAGCCTGACT GGTCAGCC ATC GGCTGGTC TGAATTGAAGGATTT 59 28 accD 893687 .. 893700 + -3.8 -3.34013 AAGGGCGCGGAAGCT GCCA GCTAGG TGGC TTCGTTACACGAATA 49 17 ST40_RS04225 895179 .. 895190 + -2.2 -4.10657 CTGCCCGAGGAGGCC CTGA ATGT TCGG TTTTGAAACCTGTCG 56 55 ST40_RS04230 896513 .. 896531 + -3.8 -4.08557 ATCCAGATGCTTTTC GCG-CCG AAGGCG CGGCCGC TTCTTCTTTCAAGCG 60 93 rocF NONE ST40_RS04250 900385 .. 900402 + -12.7 -5.26316 TTGTAGCAAACTGGA CCACCGC TTCG GCGGTGG TTTTTTCTGGCCTAG 100 56 ST40_RS04255 901161 .. 901171 + -8.2 -3.23393 GAAGGATGCGGCTTT CCGG TTA CCGG TGTTATCGACTAGCG 62 2 hisB NONE ST40_RS04275 NONE hisH NONE ST40_RS04285 NONE hisA NONE hisF NONE ST40_RS04300 906950 .. 906986 + -2.8 -2.87931 GGACTGGAAGAAAAG GCGTCCCGGCCTCAGGA ATAA TCCAG-GGCCTGCAGGC TCTGTACCGGATCCG 42 5 coaA 908312 .. 908328 + -3.5 -3.90112 CTTTGCCAGTGCCGT GCGGGCC TCG GCCCCGA TTTCGTTGACAAGGG 56 338 ST40_RS04320 910189 .. 910236 + -19.4 -2.62515 TACCACTTGGAAGCA GACACGAAAAAGCCCGCAGTCTT TGA GGGACTGCGGGCTTTTT-GCGTC TGGTGTCCGGACCTT 100 43 secB 916802 .. 916825 + -17.4 -5.27335 CACAGTTTTACAGAA CCCGTCCCGG GCAA CCGGGGCGGG TTTTTGTTTGCCCGA 100 53 rph NONE rdgB NONE hemW 921856 .. 921880 + -4.9 -4.12942 CGGCACCAATTGGTT CAGCAAAGGAG AGA CGTCTTTGCCG TTTTACCACCTTTAC 62 288 phaZ 923514 .. 923532 + -14.6 -3.54543 ACAAGCATCGGTGAA GGCACCCA CCA TGGGTGCC TTTGGCCGCGTGCCT 95 42 ST40_RS04380 924391 .. 924416 + -8.9 -4.8622 AATCAATGAAGTAGA CCCGGTCCGCA ACTT TGCAGGTCGGG TTTTTCCTTGCCGGA 100 63 ST40_RS04385 924974 .. 925014 + -20.6 -3.53811 CCGTTCCCCGACGGC CAGACCAAGAGCGGCGCCT GAAA AGGCGCCGCTCTTG-TCCG TTTCAGGACAGTCAA 100 59 ST40_RS04390 926289 .. 926300 + -3.6 -3.86822 GACAGCAGATCAACG GTGC CGAT GCGC TTTGTAACGAGATTG 56 427 ST40_RS04405 NONE ST40_RS04410 928547 .. 928557 + -8.2 -3.15544 CCATCCTTCGAGACA GGCC TCT GGCC TTCCTCAGGATGAGG 60 95 ST40_RS04435 936405 .. 936416 + -7.2 -5.00616 CTGCAAGGGTATGAG GCGG ATCT CCGC TTTTTTCCGGGCAAG 91 494 ST40_RS04475 NONE ST40_RS04480 NONE polA 950412 .. 950437 + -5.9 -3.55444 GAAGAGAAACACCGA CGCCAGCGAGG CAAG CCCCGCGAGCG TTTGGCCGATGAAGC 55 246 ST40_RS04500 953739 .. 953766 + -9.9 -3.29144 CGGCTGTATCTTGCC CGCCA--GCGCCG AGCG CGGCGCAATGGCG TTCTGCAGGAGGTCG 68 71 ST40_RS04510 955805 .. 955841 + -3.7 -3.13403 TCACTTCCAGCTCTC CCGCCGGGTTTGAG ATGACCTTGG CACAGACCCG-CGG TCTTACTGCCGCGGG 45 13 ST40_RS04515 956976 .. 957008 + -9.2 -2.95491 GGTCAGACCATAACA GCGGGTTATGGTGGC CAAC GCCCTCATAACC-GC TATGTGCTGGCCTTT 62 28 ST40_RS04520 957322 .. 957334 + -7.7 -3.29508 GGTCTCCTGACTAGG CAGAC CTC GTCTG TTCCATATTTGTTCT 59 31 ST40_RS04525 NONE ST40_RS04530 960183 .. 960193 + -2.4 -3.48914 ATAACCTGTAATGCC GGAG ATA CCCC TTGCGTTTTCTTTCC 47 113 ST40_RS04535 961221 .. 961248 + -4.9 -3.53811 GCCGGAACGAAGAAA TACAACCCGGT GACCAA ATCAGGTTGTA TTTCAAAAGGATGCC 52 129 ST40_RS04540 NONE ST40_RS04545 NONE ST40_RS04550 967911 .. 967927 + -8.7 -4.015 CGTTCCATGGAAAAA TGCAGGG GCG CTCTGCA TTGTTTCCTCCATAA 76 113 ST40_RS04555 969765 .. 969799 + -11.5 -4.56775 CTGTCCTGACCAAAT GGAA-GAGCCGGGGAA AATG TCCCCCGGTTCTTTCC TTTTTCACGACACCT 95 32 hisC NONE ST40_RS04565 NONE ST40_RS04570 972349 .. 972377 + -6.7 -2.83299 CTCTTCCGCAATGAT GCTCTAGTTGG CCCGTCC CCAACAGGAGC CTTTGAATGTCCTCA 52 100 ST40_RS04575 973344 .. 973383 + -10.5 -2.73243 CACCGCAAGACATGA AAAACCCCGCCGGCCGG AGTGAA CCGGCCGACGGGGTGAA ATTTCGCGACTGGAT 66 26 ST40_RS04595 NONE ST40_RS04600 976812 .. 976823 + -7.2 -2.71791 GGTTACAGGTAACGG CCGC TCGG GCGG GTTTGGGCCAGGCGT 55 29 ST40_RS04605 978257 .. 978278 + -5 -3.57462 GAATGTCCGGGTTTT CCGTCAGC TCCAGC GCGGGCGG TTTGCCGGTGCCATC 54 459 rsmI NONE ST40_RS04625 982297 .. 982319 + -6.8 -3.47349 CAAAGGCGCTCAAGC GGCGCCGCCC GCC GGGAGTTGCC TTATGGCTTTGAAAG 60 370 gshB 983305 .. 983322 + -6.3 -3.35774 CGAATATCCGCTTGA CCTCAAT TTAA GTTGAGG TTGTAGAGCTTTCTC 56 64 ST40_RS04635 984185 .. 984210 + -14.7 -3.53091 GCAGGGCAAAACAAA GGCCGCTTTCC CGAA GGACAGCGGCC TTTCAGAAGCAACCT 95 517 ST40_RS04645 NONE ST40_RS04655 987816 .. 987842 + -9.4 -3.14132 ATCGCCTTCAGGTCG TCGGGCAGTC CGTCATA GGCTGCCCGG TTCATGCCCAGCACG 61 459 ST40_RS04675 991279 .. 991289 + -6.8 -2.91582 TATCTCGCGGTAACA GGCT TTC AGCC TATCTCCGTCACGTG 53 28 ST40_RS04685 993758 .. 993780 + -16.4 -3.07816 GAGATTGCGTGAGCA GGCTCTCTGA AGA TCAGAGAGCC TTGAATACATGAACC 100 136 rsgA 994969 .. 995014 + -17.8 -3.53012 GCCAAGGCTTACGTA GCTGCTGACATCCGGAGCCGGGC TTT GCCCGGCTCCGGAT--CAGT-GC TTTCAAGCGCACCCG 100 53 ST40_RS04710 997219 .. 997230 + -2.2 -4.25056 AAGCCACCTCCGAAG GCTT GCTC AGGC TTTATTGATCAGGTC 60 6 modB 999152 .. 999170 + -2.4 -3.26471 GCCGTTTGCGCGCGC GCATGG GGGGCGG TCATGC TTGATGTCGACATCA 43 3 modC 1000296 .. 1000314 + -2.2 -4.11183 CTGGATAAGGCTCCC GCTTCACG CGG CGCGCGGC TTGTTTATACTGACG 56 33 ST40_RS04735 NONE ST40_RS04740 1003498 .. 1003508 + -8.2 -3.14881 TGACCTGATTTCCTT GCCG TCC CGGC TTGCTGGGCGGGTTG 60 44 ST40_RS04745 NONE sigJ 1005015 .. 1005043 + -10.4 -3.75933 TATGATGTAGCAGGC CTGAGATGTGTCG GTTT CGACACATC-CGG TTTGATGCCATGTGT 76 66 ST40_RS04755 1006281 .. 1006299 + -16 -3.29511 AAACAACTCCTGGAA GGGCCGGA TCG TCCGGCCC TTCTGCCAAGGTCCC 100 51 ST40_RS04760 NONE ST40_RS04765 1008643 .. 1008661 + -17.4 -5.95539 ATCCAGAAACTCGAA CGGCGGGC CTT GCCCGCCG TTTTTTTGTTTGCCG 100 52 ST40_RS04815 1022700 .. 1022727 + -9 -3.08679 TGCCGTCACTGGCCA ATCAGGCCCGGT ACAT ACCGGGCCGGGC TATTGCCTGCCAGGC 63 45 ST40_RS04825 NONE ST40_RS04830 NONE purU 1026437 .. 1026467 + -16.8 -4.30576 GCCCGAAAAGCAATT GGCCCCGGTCGTCC GAT GGATGGCCGGGGCA TTTTCATGATCCGGA 100 54 ST40_RS04845 1027822 .. 1027856 + -18 -2.52676 CCCTGTGGCCGGTCG GGCAGATCCGGCAG GCGCATG CTGCCGGATCTGTC TCGCTTCACGCAGTG 95 80 ST40_RS04855 NONE ST40_RS04865 1031408 .. 1031423 + -3.2 -2.60496 GGTAATGTGTGATTT TGCCAG GTAC CTGTCA GTCTTTGACAAGCCG 40 49 ST40_RS04870 NONE ST40_RS04875 NONE ST40_RS04880 1033614 .. 1033628 + -7.1 -3.14211 CCGAAGATCCAGCAA GGCCA CATCA TGGCC TTCGTCGGCGACAGT 54 43 ST40_RS04885 NONE ST40_RS04890 1036312 .. 1036327 + -4 -5.88061 GTCTTTTCGTGATCA GTGAAA GTTT TTTCGC TTTTTTTGATTTTTT 100 64 ST40_RS04895 1038268 .. 1038284 + -4.3 -3.87815 GCCCTAGGGGAACCT GGGGCTG GAT CACCTCC TTTCTAAGGATGACC 58 6 ST40_RS04900 1038538 .. 1038581 + -3 -4.15066 GTCGGAGGTTCAAGT CCT-CCTCGGCCCACCAACTC TTC GATTTGGTGGCCCTCGGCATG TTTGGTTTGTGCGTC 58 10 ST40_RS04905 1038762 .. 1038788 + -10.3 -4.59342 CACCATTCACTTTGT TCATGATGTCG CCCGA CGACATTATGA TTTGTTTGTCCTCGG 95 36 ST40_RS04910 1041902 .. 1041940 + -16.2 -4.1899 CTCATTAGTCAATGT TCATCTTTTGGATGCGCC CCT GGCGCATCAAAAAGATCA TTTTAAGTGCGCTAC 100 41 rrf 1042301 .. 1042312 + -7.2 -3.06796 GCCTGACCGGCCGGC GGCC ACTC GGCC TTGCCTCCGCTGCGC 57 124 ST40_RS04920 1042537 .. 1042553 + -10.8 -5.5112 GCAACCAACAAATAA CCCGGC CTCGC GCCGGG TTTTTTGTTGGTAAC 100 34 ST40_RS04930 1044879 .. 1044892 + -2.3 -2.64912 CCATCAGGCTGAGCG CGGCA ACGA TCCCG ATTGTCGATTCCAGG 38 137 ST40_RS04940 NONE ST40_RS04945 NONE ST40_RS04950 NONE ST40_RS04955 NONE ST40_RS04960 1051308 .. 1051328 + -6.7 -3.53012 GAAGGCCAGGCTCGG CGTCAGCGT GGT GCGCGGGCG TTTGCCGGGCGCCAG 58 462 ST40_RS05005 NONE ST40_RS05010 NONE ST40_RS05015 NONE ST40_RS05020 NONE ST40_RS05025 NONE ST40_RS05030 1065913 .. 1065938 + -19.7 -4.11484 CTTCAGTAACGCAGC CGGGCGGCGGT CACC GCCGCCGCCCG TTTTCCAGAGTTCAA 100 32 ST40_RS05035 1067949 .. 1067964 + -4.6 -3.10112 TCTCTGCGCGACTGG CGACGC GCGT GCGTCC TTCGATAAGTTCCCT 46 220 ST40_RS05045 1071554 .. 1071568 + -2.1 -4.18934 GCCCTTGCCGATAAA GCGCTG CATC CAG-GC TTTCTTGGCATCATC 60 270 ST40_RS05080 1081196 .. 1081206 + -4.6 -3.57144 GGGCTTCGGCAAAGG GGGC CGT GTCC TTTGCAGCTGCCGCG 54 170 pcaQ 1088237 .. 1088254 + -9.1 -2.75349 AAGCTTAACTCTTTT GCGCCAG CCTC TTGGCGC TCGGTTTTGCGAATT 60 69 ST40_RS05125 1088800 .. 1088812 + -4.7 -4.25104 CAGATGAACCGGAAT GCCGG AAA CCAGC TTTTGCTGGCGGCCC 65 239 ST40_RS05155 1095264 .. 1095275 + -7.2 -3.15544 CCATCCTTCGAGACA GCGC TGAA GCGC TTCCTCAGGATGAGG 57 126 ST40_RS05205 1106790 .. 1106807 + -4 -4.20516 AGCTGGTAGTGAGGG CCAGCG CCGTGC CGCCGG TTTGTTGAATGGCGG 60 0 ST40_RS05210 1108110 .. 1108143 + -8.1 -3.61774 CCTTCTCTGGCATTA TACATACGGCGCCGT TTTC ACGGCGGTGTGTGCA TTTGCCGGTCTTATC 68 72 ST40_RS05215 1111338 .. 1111348 + -8.2 -3.28712 ATCGCGCATGTAGAT CCCG TCC CGGG TTCTCGACCCGGCAA 59 394 ST40_RS05230 NONE ST40_RS05235 NONE ST40_RS05240 NONE ST40_RS05245 NONE ST40_RS05250 NONE ST40_RS05255 1120258 .. 1120271 + -2.4 -3.17075 TTGAGGGAGCCCCTT CATG ACGAGC CATG TTCAGTTGCCCGAAC 43 21 ST40_RS05260 1122402 .. 1122417 + -4.6 -3.5393 GTGATCAGGAGGCCG GTGGCG ATAC CGACAC TTTCGGGCACGTAGT 52 333 ST40_RS05270 1124300 .. 1124330 + -13.2 -3.68827 ATGTAACGTCAATCG GGCAGCCGGGGCGG AAA TCATTCCGGCTGCC TTTGCCTGATGCCTG 89 35 ST40_RS05275 1126691 .. 1126705 + -9.2 -3.28684 GCAGATGGAAGGCAT CCGTCG GGC CGGCGG TTGATCTGCCTGCTT 65 7 ST40_RS05295 1131751 .. 1131761 + -3.2 -3.55563 CTGGCGGACCGTTTC CGAG GAG TTCG TTTCCAGGATCGGCT 49 297 ST40_RS05305 NONE ST40_RS05310 NONE ST40_RS05315 NONE ST40_RS05320 NONE ST40_RS05325 NONE ST40_RS05330 1139013 .. 1139033 + -5.3 -2.78384 AAACTTCGGCCTGAC CGGTCACGT CCG GCGGGATCG TATCGTCCGGCCGGA 46 289 xylF NONE ST40_RS05360 NONE ST40_RS05365 1147187 .. 1147212 + -17.5 -3.26473 CGGATAAACCGACAG GACCCGCGGGC TCTT GCCCGCGGGGC TTCCTCATGGTTTGA 100 34 xylB NONE xylA 1150131 .. 1150168 + -14.1 -3.3452 TTCGTCTGATGCAAA CTGCATCCGGGGCGCTG GTTG CAGCGCTCCGGATGGGC TTCTAAGCTGATGTC 95 32 ST40_RS05385 1152872 .. 1152893 + -6.5 -3.57462 AACAGCCGTGCGGCC CCGCGCCAGA CCT TCAG-CGCGG TTTCCGACTGACGTC 60 452 ST40_RS05395 1153735 .. 1153746 + -7.2 -3.15544 CCATCCTTCGAGACA GCGC TGAT GCGC TTCCTCAGGATGAGG 57 172 pap 1163509 .. 1163530 + -3.7 -4.25104 CGAGACAGCGCTGCG CGCTTCCTCA GGA TGAGGAC-CG TTTTGCTGAAGGGAC 64 139 ST40_RS05445 1166510 .. 1166523 + -5.2 -3.40403 CCAGCCCCTGTACTG CGCC GACAAA GGCG TTGTGGTCGAAGAGG 49 228 gcvA 1169949 .. 1169969 + -2.3 -4.59773 ACAGTGCGTCCCCAC GACGGTTCC CTT GGTCCCGAC TTTTTAGCGATCGGC 65 54 yegS 1171160 .. 1171174 + -5.6 -3.53012 CGCAAGGTGCGGGAA GGCGTG GGG CACGGC TTTCGAGAGACGGAC 55 90 ST40_RS05470 1172304 .. 1172322 + -2.3 -4.10161 TTCATAATGATAGAA GGACCGG TAGCC CCAGTTC TTTTCCCGGGTCATC 57 402 gmd NONE ST40_RS05485 NONE ST40_RS05490 1176308 .. 1176322 + -2.2 -3.91858 AAAAACATTGAATGT TTTTTT GAG AGAAAA TTTATAGAGTATGTA 52 59 ST40_RS05495 1177661 .. 1177680 + -4.3 -3.17212 TGATAGTTTAGTTTG CAGCGAT GCGTGG ATTGCTG TTAATGCGGTGGTCA 49 317 ST40_RS05505 NONE ST40_RS05510 1180181 .. 1180196 + -6 -3.61398 TGAGCGTCGTCTTTT CGTGCC AGAG GGCCCG TTGTTCGACAACACC 57 469 ST40_RS05530 NONE ST40_RS05535 1185271 .. 1185288 + -3.3 -3.08798 GTGGAAACCGGGCCA GACCTCT TCCA GGAGGCC TATTGAGTGAGCGCT 43 2 ST40_RS05540 NONE ST40_RS05545 1186748 .. 1186762 + -2.7 -3.09273 CCGCGCCGCCATTGA GCGGC TGCGC GCCGA TATCTGTTAGGGGGA 43 1 ST40_RS05550 1188094 .. 1188104 + -8.2 -2.87564 CCTCATCCTGAGGAA GCGC GAA GCGC TGTCTCGAAGGATGG 59 102 ST40_RS05555 1189427 .. 1189458 + -4.4 -3.62096 GCAAAGGTTCCACCA GTTTCGGCGAT-CTG CCG CAGGAGAGCCGGAAC TTTCCAGTAGTAGGC 54 171 ST40_RS05575 NONE livM NONE ST40_RS05585 NONE ST40_RS05590 NONE ST40_RS05595 1197609 .. 1197633 + -2.1 -3.17723 CAAGAATCGTCCCTG GCCCG-GC CAAAACGGAA GCACGGGC TTCCATTCCAAGTGG 43 102 ST40_RS05600 1198816 .. 1198841 + -19.7 -5.4505 ATGCTTAGCGTCAGG CCCCGTCCGGC AGTT GCCGGGCGGGG TTTTTTGTTGCCCGC 100 62 ST40_RS05605 1200398 .. 1200409 + -5.8 -3.09516 CGCCAGCGACCACAA CGGA AAAA TCCG TTAAATCCTAAAAGA 52 66 ST40_RS05610 1201590 .. 1201616 + -22.4 -3.0264 CAGATGAGAAACCGG TCCGGGTGAGGC GAT GCCTCACCCGGA TCTTCCAACGGATTT 100 76 ST40_RS05615 NONE ST40_RS05620 1203892 .. 1203921 + -21.5 -4.35926 TAAATTTGGGCCTGG CGGGCCGGCTTCT TCGC GGAAGCCGGCCCG TTTTGCGTTTCAGGT 100 142 ST40_RS05625 1205239 .. 1205257 + -3 -3.02144 TGTTGGGAAGAACAC TGGCGGCA AGG TGCGGGCA TCTTGCCGCCAGTGA 43 58 ST40_RS05630 NONE ST40_RS05635 1206705 .. 1206717 + -5.5 -4.1822 TCAGGAAACTGTCGA CGTCT CCA AGGCG TTTGTTGCGGTCGAA 68 103 ST40_RS05645 1210462 .. 1210488 + -12.2 -3.76968 CAAGACCGGAGGTTC CCTCGGTGGCCA TCC TGGCCAGCGTGG TTTCGTCCATGCCTT 85 123 ST40_RS05660 1211769 .. 1211802 + -10.3 -3.17075 GGAAGACGCAAAGGC GCTGGCGGGT-TGAAC GAA GCTCACACCCGGCAGC TTGAATTGAACAACG 71 13 ST40_RS05665 1212380 .. 1212391 + -5.8 -4.61873 GGCTTGAGGGACGGT TCCG TCCA CGGA TTTTGATTTGTCCGC 76 146 ST40_RS05675 NONE ST40_RS05680 NONE ST40_RS05685 NONE ST40_RS05690 NONE ST40_RS05695 1218865 .. 1218881 + -7.2 -3.16881 GGCCGGCAATGCGAT CCGGCG GAATA TGCCGG TTGATCCGCTGGCTC 59 431 ST40_RS05700 1219709 .. 1219722 + -2.3 -3.05596 CTGAGGGGCGTCGGA TGCCG GGAG CTGCA TTCGATAAGGGAATC 42 37 ST40_RS05705 1221037 .. 1221047 + -2.4 -4.07687 GTTTTGCGTCCGGAA AGCG CGC CGCG TTTTCAAGCGAGGAT 57 132 ST40_RS05745 NONE ST40_RS05750 NONE ST40_RS05755 NONE ST40_RS05760 1233016 .. 1233049 + -11 -3.05343 ACCAAGGCGGCAACT TCC-TCCGGCTTGCC CGTCC GGCCAGCCGGGTGGA TCTTGCCAATGTCGC 68 162 ST40_RS05785 1239140 .. 1239168 + -13.2 -2.74144 GTCCTGATTGAGGGG T-TAGGCGGCGGC TAAG GCCGCCGCCTGCA ATTTGGCCCTGCCCC 79 34 ST40_RS05790 1240425 .. 1240436 + -7.2 -3.40073 ATCATCGGCGGCGCT CCGG CGCT CCGG TTCATTACTACGGCT 61 177 ST40_RS05795 NONE ST40_RS05800 1243038 .. 1243059 + -17.3 -2.72991 CTTGAAATACAATCA CCCCCGGAG GTCG CTCCGGGGG TGATTGAAACTCTGC 91 60 nspC 1244749 .. 1244768 + -3.6 -2.57243 GGTCCAAGGAAGGTA TCTTTATC AAAT GAAAAAGA CTGTTCTCATCATCG 42 65 ST40_RS05815 1246029 .. 1246052 + -18.2 -3.85909 GCTGATCAACCTGTG CAGCCCCGGT TACC ACCGGGGCTG TTTGCGTTTCAGTCG 100 57 ST40_RS05830 NONE ST40_RS05835 1248758 .. 1248772 + -4.3 -3.71873 GGCCATTTCTTTAAT TAACG GGTTG CGTTA TTTAAATCTCCCTAC 55 93 ST40_RS05885 1266750 .. 1266770 + -8.9 -3.22877 CGCTGGAACAGATTA GGCCCGCTC TGT GAGTGGTCC TTCAATCTTCCTTTG 65 12 ST40_RS05915 1272792 .. 1272802 + -2.4 -4.07568 ATTCTTAAACGAGGG CAGC ATG GCAG TTTTCAGCACCGCGA 56 190 ST40_RS05920 NONE ST40_RS05925 1274742 .. 1274759 + -5.5 -3.84271 GCCAAATTGCTGAGA TCGTTCC AGTC GGAACGC TTCTTAGTGTTGTAA 60 239 ST40_RS05960 1283861 .. 1283896 + -4.8 -4.17132 CAATTTGGAAGCGCC GTTGCGGCAAGGAAA TGTTGTC TTTCCT-GCCGCGAA TTTATTGGCAAATTT 62 348 ST40_RS05970 1286773 .. 1286789 + -15.1 -5.85425 CTGAAACGTAAAAAA GCGGCGC AGA GCGCCGC TTTTTTATTTGTTTG 100 48 ubiE NONE ubiB 1299911 .. 1299927 + -9.5 -2.90075 GGGCAAGGGCTGCTT CGATCTT CAC AAGATCG TCTGCTTCCAGCCGC 59 363 ST40_RS06030 1301134 .. 1301160 + -10.1 -3.57144 GGTGCGTCAAGGCAT CCGGCATGGCCG GCCA TGGCCG-GCCGG TTTCGGGGTGCGCCG 73 389 dnaK 1304617 .. 1304630 + -9.5 -2.70932 AAGGGCACTTGTGCG CGGCG CCTT CGCCG TAATTGGCGCCGGCA 64 114 dnaJ 1305863 .. 1305873 + -6.8 -3.40611 TGCAATATGTGCGCT TGCC CAT GGCA TCTTATTGCAATCAC 58 67 ST40_RS06055 NONE ST40_RS06060 1307337 .. 1307352 + -6.8 -3.14463 AAATGTGTGTCTTGA GCCGAT TTCG GTCGGC TTCATAGCCGGGCTT 54 72 hslV 1308014 .. 1308032 + -3 -3.0693 GTCGAGTCGCTGGAT ACGGCC GAGTAAG GGCCGA TGATTTCGTTTCGCC 43 14 ST40_RS06070 NONE hslU 1309886 .. 1309901 + -2.4 -2.74322 AAGACACCGGTTGAG CGCTTC GTGC GCGGCG ATTTCGCCGCTTGCG 39 53 ST40_RS06080 NONE ST40_RS06085 1311217 .. 1311238 + -12.9 -4.07678 CTGAAGAATTTCAAA GGCCCGGCC TCTT GTCCGGGCC TTTAATATTTTCGAC 95 52 tsaB NONE rimI NONE ST40_RS06100 NONE ST40_RS06105 1314106 .. 1314116 + -2.4 -3.53224 AGACATGGAAACGAA CGTC ACC GCCG TTTCCGCCGCCGATA 47 235 miaB NONE ST40_RS06115 NONE ybeY 1317229 .. 1317245 + -3.7 -3.83844 ACGGCGGTTAAGTGG CATCATG GGA TGTGATG TTCTTGATTGATGGA 56 30 ST40_RS06125 1318497 .. 1318512 + -6.8 -2.62184 AAGGATGCTTGCCAA CGGTGCC GAC GGC-CCG TCGTCTCGAAGCCAC 51 66 lnt 1320209 .. 1320222 + -4.5 -2.63644 GTTTTACCAATACAA C-CGCG ATT CGCGTG TAAATTGATATTTTT 44 4 ST40_RS06135 1320880 .. 1320905 + -19.1 -2.94806 AAGATTGATGCAGAC GGAGCGGCGAT GACA ATCGCCGCTCC TGTCATATTCATTCC 100 80 metK 1322144 .. 1322172 + -16.8 -3.11289 ATGGAAGAAGTGAAG CAGATCGCCGGT TCAGT GCCGGCGATCTG TCGTTTTGAAGTTGA 100 59 ST40_RS06145 1323038 .. 1323062 + -10 -5.28481 ATCTGAGCACTTTGA GAGTGGG-CCC GCCG GGGACCCGCTC TTTTTTGCTTACATA 100 186 rimP NONE nusA 1325500 .. 1325515 + -4.6 -2.89742 TGAACGGGTAACGAG AGAGGC AAAA GCCTCC TGTATGAAGCTTCCG 46 30 ST40_RS06160 NONE infB 1329059 .. 1329096 + -17.2 -2.94218 AAATCTACTTGAAAC TGATGTCAGCGGCTTA TTCAAT TAAGCCGCTGACGTCG TATCTGGTCGCAGGT 93 51 rbfA 1329836 .. 1329850 + -4.2 -3.25823 ACTTGAATGTGTGCC GTGTCT GCA AGTCAC TTGATGTGAAAGAAG 49 159 ST40_RS06175 NONE truB 1331467 .. 1331484 + -9.9 -3.14211 CATATTCCGCCGCCA TTGGGCA CTGA TGCCCAA TTCGTCCGGAAGGAT 67 97 rpsO 1331893 .. 1331916 + -16 -5.10767 CTCAGAACCTGAAAG CGCGGTGGGT GAGA ACCCGCCGCG TTTTTGTATTGCGTG 100 44 pnp 1334387 .. 1334406 + -15 -5.4659 ACGCAAGATATGAAA CGGGGACC GAAA GGTCCCCG TTTTTGTTTGTCTTG 100 56 dapB NONE ST40_RS06205 1339181 .. 1339215 + -20.8 -4.56597 CGCATTGCCGAAATT CATGTCCCGCTGCTTC CAG GAGGCAGCGGGACTTG TTTTTGAAAGGCAGC 100 49 ST40_RS06210 NONE ST40_RS06215 NONE ST40_RS06220 NONE ST40_RS06225 1344025 .. 1344038 + -3.7 -4.29326 CAGAAGCGACTTTAC CCGCG CTTT CGCAG TTTCTTGAATTTGAC 65 489 ST40_RS06250 1349499 .. 1349514 + -3.2 -3.63627 GATTTCCGCTCAAGC TCTCCC ATAT GGGACA TTTGCAGTCTGCAAG 51 64 ST40_RS06255 1350521 .. 1350536 + -4.6 -3.58343 AGGCGTGCAGCCTCC TCCGAG CTGG CCCGGA TTTCGGGGTGGTCCG 54 504 ST40_RS06275 NONE ST40_RS06280 1356137 .. 1356151 + -4.3 -2.67803 TGCCGATGGCTGCAA TGATC TTGCT GATCA TCCGTTTGCTCCCGA 43 163 ST40_RS06305 NONE ST40_RS06310 1362425 .. 1362444 + -2.2 -4.32049 TGGATTGTTCAATAA TCG-ATTAC AAT GTGATCCGA TTTTGGTGACTTATA 60 143 ST40_RS06315 1363011 .. 1363048 + -14.9 -3.86897 GTAAAAACTGAAAAA CGCTTCACGGCCTCCG CCCATCC CGGAGGCCGTGC-GCG TTTGTGCCGGGTGCA 100 51 ST40_RS06320 1364269 .. 1364286 + -2.6 -2.85351 CATCGATCTCATGTG CGCCGG TCGGTT TTGGCG TCTGATCTCCACAGA 39 72 ST40_RS06325 1365303 .. 1365320 + -9.9 -3.01924 GAAATTTGTCCTTGA CCTCAAC TTAG GTTGAGG TCTTAAGAAGGCGTC 67 116 ST40_RS06330 NONE ST40_RS06335 1369881 .. 1369912 + -13.6 -3.14683 GACATTCTCCGAGGC ATGGCAGCCGGGCC TTTG GGCCCGGCTGGCGG TTGGTCAGCCGGTGT 84 108 ST40_RS06370 1375197 .. 1375217 + -9 -3.2794 CAGAACGGATCTGTC TGGACCCGG TGAA CCGGG-CCA TTCCTCTGCCTGAAC 65 146 ST40_RS06375 1376200 .. 1376220 + -2.5 -3.85698 ACCGCACATCTTTCG CCCAACG CTCGGCC CGTTCGG TTTGTCCGGCCAGGG 54 211 ST40_RS06385 NONE ST40_RS06390 1381102 .. 1381130 + -8.8 -2.72829 TCGCCGAGGGTCAGG GCGGTCAGGGCAC CGGA GT-CCCGGGCCGC ATTTACCGCACTGTC 57 343 ST40_RS06410 1384306 .. 1384338 + -13.6 -4.13995 ACGTGACTTGAATTG TAGAGAAGCCGGGT TAGCT ACCCGGCTTTTTTA TTTGATTTATAAGAA 100 60 ST40_RS06415 NONE ST40_RS06420 NONE ST40_RS06425 1389715 .. 1389729 + -9.2 -2.84325 GAAAAGGCGGAAAAA CTCGGC AAA GCCGGG TAATATTTCCAGCGA 60 8 ST40_RS06430 NONE ST40_RS06435 NONE ST40_RS06440 1394224 .. 1394247 + -8.8 -2.50994 TCTTGTCGTCCGGTA GCCGGTAGAT CGCT ATCCGCCGGC CTTCCTGCAGTTCGG 56 415 ffs 1400550 .. 1400572 + -11.3 -5.79595 CAGCTTTACCAAAAA GCACCGCCGG TTCT CCG-CGGTGC TTTTTTGTTTTCGGG 100 55 ST40_RS06485 NONE ST40_RS06490 1401367 .. 1401379 + -6.2 -3.55801 GACACGCTTCGCATA GGGC CGTGT GCCC TTTGCCGCGATTGAT 55 93 ST40_RS06500 1403763 .. 1403779 + -2.1 -3.5393 GTAAGGTCGCGGAAA TCCGCGC CAT GTGAGGG TTTGGAAGGAGTCGT 47 80 ST40_RS06505 1404210 .. 1404231 + -6.5 -3.39018 AATCAGGGGAGCGAT CCGGCCG-GT TTG ACGCGGCAGG TCTTTCAGGTGGTCG 58 117 recR 1405108 .. 1405135 + -4 -3.02649 GGTTAGTGAACGAAA CCGGTGGCGCAG TTCT TTCTGCCAGCGG TGTGTGTAATCGGCT 43 254 ST40_RS06520 NONE ST40_RS06525 1407580 .. 1407599 + -2.7 -3.70478 GTTCGGCGTTCCCCA CGGGGGC GAAGGG GCTCACG TTTAGGTCACTTTCT 51 1 sdhC 1408262 .. 1408272 + -2.4 -3.05463 GATCCTCTGGATCAT CGGC TAC GCGG TTCGCTAAGGAGAGT 42 7 sdhD NONE sdhA 1410482 .. 1410498 + -6.5 -2.78384 CGATCCGAAGAAGAT CGCGC CGAAAGC GCGCG TCTACTAAGGAGACG 52 1 ST40_RS06545 NONE ST40_RS06550 1412232 .. 1412252 + -16.1 -5.4505 GCCAGAAAATCGAAA GGCCGTCCC GGG GGGGCGGCC TTTTTTGTTGCGACA 100 51 creD 1416211 .. 1416239 + -16.7 -4.43309 ATGTCGCCAATCCGG TCGGCGGTGTGGC TTC GCTGCGCCGCCGA TTTTGCTTGGCATTG 100 62 ST40_RS06570 NONE ST40_RS06575 1417271 .. 1417289 + -4.6 -2.53015 CGGGCGCGTTACCTC TTTCGGGT AGA ATTCGAAA TGACTTCACGGGTCT 43 148 msrA 1418236 .. 1418248 + -3.3 -3.5764 CTGAAAGGACGCTAA CATGC TGA GCTTG TTTGGAAGTCGCGTT 49 162 ST40_RS06585 1419117 .. 1419136 + -3.4 -4.18018 CGAGCTTCTCGTCAC CGCGCAGA ACGC TCCGCGCC TTTTCCGTCAGAACC 62 384 ST40_RS06605 1422891 .. 1422901 + -4.6 -3.08464 AGCAGGCAAGGCCGT CTCG AAC CGGG TTGCCTGAGTGATCA 47 7 ST40_RS06610 NONE ST40_RS06615 1424509 .. 1424544 + -14 -4.15044 ACCCCTCCCTGTGCC CTGCGCCCGTAACC CTCCCACC GGTTGCGGGCGCTG TTTGTTCAGAGGGCG 100 146 zapE 1426711 .. 1426729 + -3.8 -3.05384 CCTCAGTCATCAGAG GATGGCAT GGA GTTCCATC TTACGTAAAGGGAAA 45 157 mdh NONE sucC NONE sucD 1429966 .. 1429996 + -8.9 -4.57569 GCATGATGAAAGGAT GGGTTCCGGCGCG GTTTA CGTGCCGTAACCA TTTTTCGAGGGGTCG 89 92 ST40_RS06645 1433100 .. 1433117 + -12.7 -3.5936 GGAAGTTAGTCACAA GAGGGCC TTCG GGCCCTC TTTCAAAAATTTGGC 85 32 odhB 1434693 .. 1434736 + -8.1 -4.19953 ATCCGGTTCAGTGCC T-TGCGAGTGCCTTGCCGGG AACGC CCCGGCAGGGTGCCCGGACA TTTTAAGGTTGCCTG 77 40 ST40_RS06655 NONE ST40_RS06660 NONE ST40_RS06665 NONE lpdA 1439152 .. 1439188 + -20.1 -5.12068 ATGTCTTTTCGATAT CGGTTCGGGGCATCCGG TCA CCGGGTGCCCCGTACCA TTTTTGTTGGATCTG 100 55 ST40_RS06675 1441097 .. 1441125 + -5.1 -2.54193 AACTCCGCCTCCAGT TTGCGCAGGTGGG CAA TCCGCTGGCGCAC TGCCTTCAACTGATC 42 242 ST40_RS06685 1442152 .. 1442178 + -16.6 -3.90744 GGAACATGACTCAAG CGGTGGTGCTTC CCA GATGCACCACCG TTATTTCCGGAGGAA 100 53 ST40_RS06705 1444996 .. 1445030 + -8.5 -3.53012 ACCGCCTGGCAGACC GCCGGC-AGGATCGGG ACAA TCCGCTCCTTGCCGCC TTTGCCGACGACACG 62 356 ST40_RS06720 1449411 .. 1449422 + -3 -5.13521 CATACCTTCTGACCT TGAA ATCA TTCA TTTTTTCAATGCTTT 76 425 ST40_RS06725 NONE atpA 1451558 .. 1451570 + -3.4 -3.17075 AGCTGCCATCGACGC GTTC GCCAA GAAC TTCGCTTAAGACCAC 45 4 ST40_RS06735 NONE atpD 1453956 .. 1453984 + -16.8 -3.78124 CTTGATCGGCGAATT GACCGGACGCCCG TTAT CGGGCGTCC-GTC TTCTTCATGCTTGAT 100 36 ST40_RS06745 1454478 .. 1454499 + -15.1 -5.19879 AGCTTCATTCAATGA CGCGGTCCG GCAA CGGGCCGCG TTTTTGTCTTTGGGG 100 54 ST40_RS06785 1465275 .. 1465304 + -17.3 -3.8766 AAACGATCTGCTTTT GGCTGTTCAGTCG GTTT CGATTGAACAGCC TTTGATCTAATGTGA 100 78 ST40_RS06790 NONE ST40_RS06795 1467677 .. 1467690 + -5.2 -2.64337 CAGACTGATAAACGC CCGG CTCTTT CCGG ATCTCTTTTGGGATC 46 95 ST40_RS06800 NONE ST40_RS06805 1468453 .. 1468474 + -2.9 -2.52834 TGATTTTGACATTTC GTGCCGCCAC CCT GCGGTG-CAC ATTCCTGCTGCGGTC 40 38 ST40_RS06810 1469865 .. 1469886 + -8.9 -4.21974 GTGATTGGGACATAT GATATAAAG AATT CTTTATATC TTTATTGCGTGATGA 80 37 ahcY 1471512 .. 1471538 + -13.8 -3.38281 GTGAACAAAAAAATG CAGGACCCTTTA ATT TTAAGGGTCCTG TTAACTTTTCAATAA 88 90 ST40_RS06820 NONE tsaE NONE ST40_RS06830 NONE addB 1479642 .. 1479655 + -2.3 -3.2048 CAGGAATGGGCACTT GGATC GGAG GAGCC TTCATGAGCTTTCAG 43 5 addA 1483168 .. 1483184 + -4.3 -2.6563 CACATCGGCTTGACG GCAGGCC CTC GGCTTCC TACGTTCTTGCCAAC 44 28 trxA 1483616 .. 1483652 + -13.8 -3.34517 GCGGTTCATATGAGC GCATCCGGCGGGTAAGC GAAA GCCTATCCGCCG-ATGC TCTTTGAAAAAACGT 88 70 grpE 1484366 .. 1484396 + -12.5 -4.86731 CCCTAGAGCTTTGAA GGGGCTGCTCCGC ATCCA GCGAAGTGGCCCC TTTTCTTTGGGGCAA 100 51 ST40_RS06855 1485762 .. 1485786 + -9.1 -3.75933 GCAAAAACAGCGTGC GCTGGCCGTAG TAA CGCCGGCCGGC TTTCGTGCCCTGTGT 71 516 ST40_RS06885 1490078 .. 1490099 + -3.6 -3.13639 CCTCCGTTTGCGGAG GCCGCAGC ATGATC GTTGCCGC TGTCTTCATCGGATT 45 14 ST40_RS06890 NONE ST40_RS06895 1492508 .. 1492529 + -12.9 -4.89567 TGCGTGAAAAAAGAA GCCCCGCAG CGAA CCGCGGGGC TTTTGTCTTTTCAGC 100 82 ST40_RS06930 1499399 .. 1499428 + -4.2 -3.04398 GGAACGCAGTGGCGC GCGGCTGAGGTCG TTGAC CG-CCTCTGTTGC CTTTTGCAAGAGCCG 46 111 ST40_RS06940 1502528 .. 1502547 + -15 -4.35926 ACGCAGAAACAAAAA GCCCGGCA TTGC TGCCGGGC TTTTCGCTTTCAACT 100 517 ST40_RS06965 1507262 .. 1507291 + -16.5 -4.07568 GATCGCTAAGCTATT GTCCGGACAGGCT TTTC AGTCTGTCCGGGC TTTTCCACAAGCGGC 100 32 ST40_RS06970 1507731 .. 1507763 + -7.8 -4.43397 CCGGCATGAGATAAG GTCGTTTCGGTCAGA CAGT TC-GACGGAAACGGC TTCTTTGTTTTCAGG 79 274 ST40_RS06975 NONE ST40_RS06980 1509178 .. 1509204 + -2.1 -2.87564 CGCGCGCCGCCTATC CCTCGACACGG ATTGC CTGAGGTGAGG TCTGTGCGGACATCC 40 6 ST40_RS06985 1510136 .. 1510155 + -2.1 -3.69323 CCCAGAACAGGACCG GTGCCTT ATGACG AAAGCAC TTTCCGTAATCCTAG 50 15 ST40_RS06990 NONE ST40_RS06995 NONE ST40_RS07000 1514068 .. 1514099 + -18.8 -4.15854 CGGCTAAAAGATAGA CAGGCTTCGCGGTC AGCC GGCTGCGAAGCCTG TTTTGACGTCAGTTT 100 56 ST40_RS07010 1516197 .. 1516229 + -5.4 -3.53012 CATCCATCCTCCATC TGCCTTGCCGGGCGG TCCG CCGCCCGGCTCA-CA TTTCAAGGGGACAAG 55 43 ST40_RS07015 NONE ST40_RS07020 NONE ST40_RS07025 NONE ST40_RS07030 NONE ST40_RS07035 1522009 .. 1522023 + -5.7 -3.14878 CACCAATCGAACTGC TGCTG CCCAA CAGCA TGTTGGATTAGCAGC 52 62 ST40_RS07040 1523172 .. 1523184 + -5.5 -3.53343 GCAGCACGGCAATGA CTGGC GTC GTCAG TTTCGGCAAGGCCTT 55 245 ST40_RS07050 1525150 .. 1525167 + -6.9 -3.53444 TTTTGCGTCGAGCGC GCCGGGA GCAG TCGCGGC TTTCGCCAGGGATCC 58 284 ST40_RS07090 NONE ST40_RS07095 NONE ST40_RS07100 1532512 .. 1532531 + -2.9 -4.24149 CCCGGCGGCCGGGCG CGACC-AT TTTTT ATGGGTCG TTCTTGTTTTCGTGC 62 89 ST40_RS07120 1535257 .. 1535272 + -8.2 -3.07994 CATCGCCGCGACCTA CCGCCG GTAA CGGTGG TTCCATACCATTGAC 60 16 ST40_RS07125 1535908 .. 1535944 + -5.8 -3.54424 AGGAGTTGTCTTGAT CGGGCCGGC-CATTTTG GGTG CAAGAGGCGCTGGCCAG TTTCAGGAGATGCCA 57 66 ST40_RS07130 1536510 .. 1536523 + -5.2 -3.14132 CGTGACTTGCCTTTC CGGC GAACCA GCCG TTGATGGCGGCGCCA 48 56 ST40_RS07145 1539996 .. 1540008 + -3.3 -2.79796 TCCTCCACGGGAGGT CCGAA ACT TGCGG TCTCATGCAGTCGGC 41 397 ST40_RS07160 1543196 .. 1543234 + -10.3 -3.07344 TGCTGGTTCCTTCCG CCTGCTCGGCCAA-CTCT TCAA AGAGCTTTGCCGGGCCGG TCTGTTCGACAATCG 64 288 ST40_RS07170 1545292 .. 1545304 + -9.1 -3.37464 CATAACCTTCGGCTA CTGGG CAT CCCAG TTCTAGGGTTCATGA 66 7 ST40_RS07185 1547779 .. 1547795 + -2.2 -4.48333 AATTTTATCAGGCCT TTGCCC GAAAA GGCCAA TTTTGCTTCCTATCT 62 118 ST40_RS07190 1548474 .. 1548500 + -13 -5.04385 CGCAAGGACGGATCG GACCGGGTCACG CAA TGTGGTCCGGTC TTTTTTGAAAGTGTC 100 71 ST40_RS07195 1549715 .. 1549725 + -8.2 -3.07043 ATGTCTGTCTCCTGC GCGC GAA GCGC TGTTCCGCTGGTCAG 60 440 ST40_RS07205 1550650 .. 1550661 + -2.2 -3.85698 GTCACCTCGCGCCCG TCCT GCAG GGGA TTTGTGAACACCACC 54 83 ST40_RS07225 1554731 .. 1554743 + -4.1 -2.90571 GTTTCTCTTGGTGAG CTTCT GGG AGGAG TATAATTGGGGAATT 44 8 ST40_RS07230 1556166 .. 1556194 + -4.4 -4.59511 CCGGTGACCTTGAGG AGCC-GTCCGCCG AGAA CGGCGGGCCGGAA TTTTTCGGACATCTT 71 475 ST40_RS07265 1564313 .. 1564329 + -5.1 -4.45399 GCGTTCCCTCTTGCG GACGC GGTCAAG GCGTC TTTTAATGTTCATAT 70 361 ST40_RS07270 1565814 .. 1565846 + -17.7 -3.57971 TCGACTTAGTCGCCA GACCGATAGGGGCGC CTT GCGCCCCTATCGACC TTTGAGCGTGGCTGT 100 43 ST40_RS07275 NONE ugpE NONE ST40_RS07285 1568945 .. 1568968 + -19.6 -5.61881 CCGGACCAGGACAGA GCCACCCCGG GCAA CCGGGGTGGC TTTTTGTTTTTGGCC 100 78 ST40_RS07290 1570669 .. 1570682 + -3.7 -4.04474 CGCGATCAGGCGAGA CAGCG GGAT CGCGG TTTCTGTGGGCATAT 59 468 ST40_RS07305 NONE ST40_RS07310 1573431 .. 1573467 + -20.9 -3.87815 TGCCAGGCGGGTCGC CGCAAGGGGCCTCGGAG ATA CTCCGGGGCCTCTTCCG TTTGTGGGGGTGACC 100 118 ST40_RS07315 1574757 .. 1574767 + -6.8 -2.52676 AAGGAACCGGTTGGT TCCG GTC CGGA TGCCTTGAAAGGGTC 51 126 ST40_RS07320 NONE ST40_RS07325 1575595 .. 1575614 + -15 -5.61881 GCGAAACGAATGCGA CACCGGCC ATCT GGCCGGTG TTTTTGTTTTTGAGG 100 58 ST40_RS07340 1579919 .. 1579932 + -2.3 -3.14132 CGTCCTGAAGCACAC CGCAT TGTG ACGCG TTCGTGAGGCAGGCC 42 44 ST40_RS07345 1580714 .. 1580735 + -17.3 -5.26119 ACGTCGATCTCATGG GAGGGCCGC TAGC GCGGCCCTC TTTTGTTTTTGAAGC 100 266 ST40_RS07355 1582803 .. 1582815 + -4.8 -3.32647 GCAATGGTTTTTACC GTGC AAGGA GCAC TTCATGTCATTGGCG 51 133 ST40_RS07360 1583752 .. 1583766 + -5.7 -3.47078 CAACAAACCTCTCGG GGATG GGGAA CATCC TTCTCATCTGCAGTC 57 92 ST40_RS07365 NONE ST40_RS07370 NONE ST40_RS07375 1587914 .. 1587939 + -7.5 -3.64703 GCAAACCGGGCAGCA TCCCGGTTCGT GAAA GCGAGCCGGAA TTTCCGTGGAACGGA 60 185 ST40_RS07385 1589114 .. 1589131 + -4.9 -3.70853 TGCCTGATGCATCCA TGTGTAGC GAC GCTAC-CA TTATTACCTAGTTCG 55 34 ST40_RS07390 1590414 .. 1590437 + -13.2 -3.5241 CCATAAGATCTTGTG CTGTCAGCGT TGTG GCGCTGACAG TCTTTGTGCAAGGTC 89 35 ST40_RS07405 1594867 .. 1594890 + -4.4 -2.70298 CCGCGCGTGTGGACA GCGGGTCCGC CCCA GTTGACCCCC ATTATGGTTCCGGCA 44 75 ST40_RS07410 1596421 .. 1596435 + -3.4 -3.53091 GTCCCAGGCCTTGAG CTGGTC TAC GGCCCG TTTGGGGCCAAGGGT 49 75 panC NONE panB 1599792 .. 1599823 + -3.6 -3.54129 AATTCTGGCCGAGCG TAAAGTCGGGTCAT GCTT ATGACCCGACCCAG TTTCGACACGCTCTA 51 263 ST40_RS07430 1601251 .. 1601273 + -7.7 -3.54919 TGGATTTCGCGCTCT GGCTGGTGA CGCGT TCACCACCC TTTCGGGCGCTGGTT 62 408 ST40_RS07460 1606334 .. 1606360 + -5 -4.05788 ACCAATGTCGCCGTA ATAGCCGACGGA CCA TCGGTCGGCGAA TTTGGTTTCCCCGCG 61 423 ST40_RS07485 1611669 .. 1611691 + -7.6 -4.2008 TGAAATAAGCCGACT GCTTCCCGGG ATC CTCGAGAGGC TTTGTTGGCATGTGT 74 158 msrA 1612423 .. 1612456 + -21.8 -4.78149 TCCAGTTGAGTTCAA GACGGGGCAGTGCC AGTGAC GGCGCTGCCCCGTC TTTTTGAATTCTCCG 100 65 ST40_RS07495 NONE ST40_RS07500 1614546 .. 1614564 + -13.1 -5.37865 CGTGATCTTCTGAAA CCGGCGG CCAGT CCGCCGG TTTTTTCGTTCTTGG 100 60 pabB 1616638 .. 1616649 + -7.2 -3.14132 ATGACTGTCAGCTCC GGCC AGAG GGCC TTCATCCGCGCCGCC 54 93 ST40_RS07515 NONE ST40_RS07520 1618178 .. 1618188 + -6.8 -4.81163 GCACAAGTCTTAACC GCCT TGC AGGC TTTTCTTGCTATTTC 81 73 ST40_RS07525 1618677 .. 1618702 + -11.8 -2.62946 GCCCGCCAGTAAAAA GGCCGCGCGA TGGTGT TCGCGCAGCC CCTTTTTCAAGTCTT 72 29 ST40_RS07545 1624775 .. 1624789 + -10 -2.91452 CGGGGTCACGGATGA TCGGCA ACT TGCCGA TGTCCTTCGGCTCCT 62 406 ST40_RS07555 1625700 .. 1625727 + -12.7 -4.27886 TTCCAAACCAGAAAA CGGCGCCTGGGC GGCAA GCTC-GGCGCCG TTTCTGTCTTTGGGA 100 118 ST40_RS07565 1627177 .. 1627210 + -9.6 -3.62224 GCGCTCTCCCGGGGC GTGCTGATCAGCTC AGAAAC GAGCTGATCAGGCC TTCTTCACGAACTCT 74 41 ST40_RS07580 1630789 .. 1630802 + -6.7 -3.74693 CGGATCAGCCGAGCA TGGTC ATCT GACCA TTTCCTGGGGTCGAC 63 422 ST40_RS07600 1634971 .. 1634988 + -12.7 -4.66609 GTAAGGCATGGAAAA GGGGAGC TTCG GCTCCCC TTTTTAAGTCAGGTG 100 37 ST40_RS07640 1642882 .. 1642898 + -6.5 -4.18506 GCTCGTCCTTGACGC GCTGGTT GGA AACCCGC TTGTTTTCGCCGTAG 71 197 ST40_RS07670 1649464 .. 1649502 + -2.3 -2.66272 TCAAACCGCTAGGAC T-TACCGGCCCCTGCC AGAGAAAA GGCTGGGTCCGGAACA TGGATTTCGATCAAC 38 29 bfr 1650089 .. 1650125 + -13.8 -2.61997 ACAAACCTGATTTCC GTCTGCCGTCGTC-GGA GCGA TCCTGGCAACGGCAGAC ATCTTCTGTCTACCA 78 53 putA 1657968 .. 1657981 + -2.3 -4.57353 CCCATAGTTCGACCA CGGGA TTCA TGCCG TTTTCTCTCCTGAAG 65 283 ST40_RS07725 NONE ST40_RS07730 1666120 .. 1666153 + -18.9 -2.60065 TGTAAGGCAGTCGTT TTGGACCTCCGCGCG ATAC CGTGCGGAGGTCCAC CTGTATTTCTAGCGT 100 36 ST40_RS07735 NONE ST40_RS07740 NONE ST40_RS07745 NONE ST40_RS07750 1670883 .. 1670905 + -4.9 -2.76696 TCCGTATCTCAAGGA GCGTTCATGA GCGA TC-TGGACGC GTTGTTCGAGGCCGC 45 16 cdd 1671299 .. 1671311 + -4.8 -3.55761 ATAAGAAGGACTGAC CCAC AATGA GTGG TTTCGGCCGTGAATG 52 37 ST40_RS07760 NONE deoC NONE deoA 1674269 .. 1674297 + -4.3 -2.64274 GAATGGTCGCCCGGA ACCTCTCCGGCCG AAC CGGCCGGCAATGA TAAATTTGAGGAGAT 44 62 ST40_RS07775 1675583 .. 1675597 + -4.9 -3.00946 CGGGCACAATAACCG CGGGC CACTC GTCCG TCCTTTCTGCGGAAA 47 71 ST40_RS07780 1676801 .. 1676818 + -9.1 -2.97588 CTTGTCCGGTATGAC GCCG-GCC ATA GGCGCGGC TGCTTTGCATTGGCT 62 163 ST40_RS07790 1679710 .. 1679722 + -3.3 -3.30159 CATAAAAAATCATGA GACCG GGC CGGTG TTATGGCCCCATTGA 45 49 upp 1680408 .. 1680429 + -13.7 -5.4756 AACAGACGGCTGAAA GCGCGGAGG GAAA CTTCCGCGC TTTTTTGTTGCGCTT 100 52 ST40_RS07800 1681414 .. 1681460 + -3.7 -3.00389 GGCCGCTAAGGAAAC CGTGATAATCAGGGGGCTC-ACG CAA CGTCGAGACCC-TGCATGTCGCG CTTTGTCATCATCTT 44 53 ST40_RS07805 1682007 .. 1682020 + -3.1 -3.45571 TCCGTTCTTCTTCCT TGCTT TGAG AGGCA TTGATGTTTCCGAAA 47 73 ST40_RS07810 1683545 .. 1683566 + -17.3 -4.12188 GACCGATTGACGAAA GGCGGCGGA TAGT TCCGCCGCC TTTTGCGCATCCTGC 100 47 ST40_RS07815 1684655 .. 1684666 + -2.2 -5.00616 GGACTTGGGGGCAAC TCGT GAAG ACGG TTTTTTCAAACACCC 74 78 ST40_RS07820 1685721 .. 1685743 + -14.8 -2.78266 AGTGCGACGGATCCT GAGAGGCGGC CTT GCCGCCTCCC TGATATTGGTCGCTT 83 61 phnD 1687863 .. 1687874 + -7.2 -3.96148 TCGGAGACCGCATCT GGGC TCAT GCCC TTTGTCGTCAGCAGA 65 468 ST40_RS07860 1692640 .. 1692658 + -13.1 -5.55769 CAAGTTGAACAAGAA CGGGCGG TTTTT CCGCCCG TTTTTTGTTCTGCCG 100 69 ST40_RS07865 1693241 .. 1693259 + -8.9 -3.44229 TCTACTTATTGGTTC GACCTCA TTCGT TGAGGTC TTGTCCTGATGGGCT 66 11 cpaB NONE ST40_RS07875 1695842 .. 1695852 + -3.2 -4.04206 AAGGCATCTATCACG GTCA GGT TGGC TTTATCTACAAGTGA 56 0 ST40_RS07880 NONE ST40_RS07885 NONE ST40_RS07890 NONE ST40_RS07895 NONE ST40_RS07900 1701799 .. 1701828 + -12.9 -2.57132 GATGGCTTCGTCAAA CTTGCCCTGGATGC CAA GCA-CCAGGGCCAG GTTCTGGCGAACGCG 68 354 ST40_RS07910 1704054 .. 1704066 + -6.3 -2.76442 GCACAATAACGGCTC CGAAA CGT TTTCG TGCTTCGATGGTCAT 50 32 ST40_RS07915 NONE ST40_RS07920 1705510 .. 1705521 + -7.2 -3.61398 ATGGATTCGAGCGCG CCCG ACTT CGGG TTCTTGACCAGGCAA 60 159 def NONE ST40_RS07940 1708638 .. 1708681 + -4.3 -2.65279 CTAAAGGTCCTGCTG CCAGGCCTGGCTTGAAGCG AGCTGA CGCCACGCGGCAGGCCTGA TCGATTTCGCACTTC 44 11 fmt NONE ST40_RS07950 NONE truA NONE ST40_RS07970 1715256 .. 1715282 + -9.3 -3.06183 TGCCAAACAGCTACT GGCGCAAGCGC TGAAC GCGCGTGAGCC TTGCATACGACTAAC 63 12 dapE 1716463 .. 1716481 + -2.4 -3.14344 TCCTCTTTAGCTATT TTTCCG GAGCAGA CGGGAA TTGATCAGCAAGGTC 42 3 ST40_RS07980 1717080 .. 1717100 + -11.1 -2.7806 GGGGCGCATGAAAAA CCCCGCC GGGTTAG GGCGGGG CTTTCCGGATTTCCA 69 30 ST40_RS07990 NONE ST40_RS07995 1721992 .. 1722027 + -8.3 -3.35073 TTCGTTCGTGAGGAG CGCTGGCGCGAGGCGTC CTGA GACGCC-C-CGTCAGGG TTCATTCAAGGTGGT 64 5 ST40_RS08010 1725229 .. 1725239 + -8.2 -3.05844 CGACTGACACCTGAT CCGG CGA CCGG TCTTGCGGTCGCCGG 60 48 araG NONE araH NONE ST40_RS08025 NONE ST40_RS08030 1729378 .. 1729407 + -3.3 -4.65666 TGTCGATGGCGGCCT CAGCGTCCAGCAG CACC CAGCCTGACGCGG TTATTTTTTCAATAT 67 1 ST40_RS08035 1730408 .. 1730425 + -4.1 -3.18735 TGACACTAGTGTCAA GGTGC TAGGGTCC GCACC TTAGTCCGGTGTTGA 47 149 ST40_RS08040 1730903 .. 1730939 + -2.2 -4.56597 TTGCCGACCTGGAGC CTCACGCAAGCGGGCGC TGAC GGGCTGACTTGC-TGAG TTTTTGACACGCGCC 65 6 ST40_RS08045 1731641 .. 1731670 + -6.3 -2.74144 ACAGCGAGACAAGAG CGGGTGAGAGGCC AGTA GGCTTGCCACCTG ATTTCAGGCTCAAAA 50 96 ST40_RS08050 NONE ST40_RS08055 1734053 .. 1734086 + -3.7 -3.17075 TTGGCGGACAAAGAA GCGTTATCCAGGGCTC CCC GATCCC-GGCTCGCGC TTCGCTTGGCCGGGA 47 189 ST40_RS08065 NONE ST40_RS08070 NONE pcaF 1737796 .. 1737830 + -17.9 -2.96216 ATCGGCAATTGTCAG GTGGAACGGCCGGGC ATCAC GCCTGGCCGTTTCGC TATCTGCTCCTCAAG 95 47 ST40_RS08140 NONE ST40_RS08145 1751127 .. 1751137 + -2.4 -2.78032 TCTGTTCGGGTGACC GCTG GTG CCGC CTGTTTTAGAGAAGC 39 28 ST40_RS08150 1752734 .. 1752750 + -9.5 -3.53761 ATTTTGCGGCTTTCC GAACTGT GTG ACAGTTC TTTGAAAAAAAGTTC 71 80 ST40_RS08155 1753107 .. 1753119 + -3.3 -3.27907 AATTCATAAAGTCTG CACCG TGC CGCTG TTGCATTCTGTGTGA 45 161 ST40_RS08165 1755654 .. 1755665 + -3.6 -3.31144 GCCATCGTTAGGTTG CTGG AGAA CCGG TTCTGCCCGTGCGCG 47 30 ST40_RS08170 1756683 .. 1756702 + -12.1 -4.30416 GTAGTTGCAAAAAAA GGCCGGG AGTTAC CCCGGCC TTTTCCATTCATCCT 93 470 ST40_RS08185 1759028 .. 1759067 + -8.7 -3.53563 CGGAGGCGCATTCCG GCGGGGCAGAAC-CGG-GAT ATG ATCTCCGTGCTCTGCCC-GC TTTGCCGGCAAATGT 68 54 ST40_RS08200 NONE ST40_RS08205 1762784 .. 1762810 + -15.1 -3.72576 TGGCCGAAAAGCGGA CGGGCGGAAGC TTTCT GCCTCCGCCCG TTTGCTCCACCGGCC 95 64 ST40_RS08210 NONE ST40_RS08215 NONE ST40_RS08220 1766322 .. 1766335 + -8.1 -3.53343 GCAGATCTGATCAGC CGGTC AGCA GACCG TTTGCCGAGCGCGTT 65 31 kynU 1769750 .. 1769761 + -3.6 -4.07568 AGGAAGCCCTGGAAA CGGT TGCA GCCG TTTTCAGACAGCCAG 59 106 kynB NONE ST40_RS08250 1773630 .. 1773643 + -2.3 -3.96216 AAACCACGGGAGATG CCGCA TGAC TGCGC TTCTTTCCATGGACG 54 18 ST40_RS08255 NONE ST40_RS08260 NONE ST40_RS08265 1776206 .. 1776224 + -3.8 -3.15663 CAACAAGATCCGGTG CGGATC AGACTTA GGTCCG TTCCTCAGGCTAGCT 45 12 ST40_RS08270 1777548 .. 1777571 + -11.6 -5.20783 AGCGTTTTTAAGAGA CCGGCGACCT GAAA GGGCCGCCGG TTTTTCTGTTTCCAT 100 55 ST40_RS08275 1779048 .. 1779061 + -3.1 -5.1861 ATTGGTAGAAGACTT TGC-GC GGC GCAGCA TTTTTTGATGATCGC 79 56 ST40_RS08280 1780363 .. 1780373 + -2.4 -2.71447 TGAATTGACCTTTCA GGGC GGG GACC TCATATCTAGTGCAT 39 103 ST40_RS08285 1780879 .. 1780901 + -11.3 -5.02715 GTAAAAAGTTTCGAA GGCGCC-ACC ATCC GGTCGGCGCC TTTTTCGTTTCGTAT 100 53 ST40_RS08290 1781541 .. 1781554 + -8.1 -2.89683 GGAAGGGGGGCGGCA GAGGG AGCG CCCTC TCTATAGACTGCGAT 59 74 ST40_RS08300 NONE ST40_RS08305 1784771 .. 1784781 + -8.2 -4.08692 ACCCTTGCAGGGAGT GGCC GGT GGCC TTTTCAGGCCGGTTA 77 112 ST40_RS08315 1785834 .. 1785865 + -18.2 -4.86385 GCGCGGATTGAACAA CGAAAAACGGGACC TTCT GGTCCCGTTTTTTG TTTGTTTTTGAGGAT 100 76 betI NONE betA NONE betB 1793250 .. 1793298 + -8.8 -2.65298 GCCTGTCACTCCATG CGTCTTTATCCT-GAGAAGCCGC GCAA GCGGCGTCTCGAGGGTTGGGCCG GTTGTCCTCGATGCC 59 141 ST40_RS08350 1794981 .. 1794998 + -7.7 -2.79183 GGCTTCTCGGCAGCT TGCG-GCC GCG GGCGCGCA TGTCGTCCACCTGCA 53 283 ST40_RS08365 1799119 .. 1799150 + -8.8 -5.07486 GCCTTTAAGTAAGAT TTAAAGGAGGACGA GAAA TCGTCCTCTTTTCG TTTTTGTTGAAGATA 100 53 ST40_RS08370 1801062 .. 1801080 + -13.1 -5.63517 GACCAGTTACGAAAA GCCGGCG GTTTG CGCCGGC TTTTTTGTTTCCCGG 100 51 cysG NONE ST40_RS08385 NONE ST40_RS08390 NONE ST40_RS08395 NONE ST40_RS08400 1807566 .. 1807592 + -17.2 -4.41348 TCGAACGAGCGTTTC AGGGGGCCCCGC AAG GCGGGGTCCCCA TTTGTTTGCGAGCGG 100 96 ST40_RS08405 1808858 .. 1808870 + -4.1 -3.90645 ACTCCGGAAGTTAAT GCATA CTT TGTGC TTGTATTATTATTGG 56 141 ST40_RS08410 1810546 .. 1810560 + -5.6 -3.60792 AGATTTCCTCCAGTG CCGGGT CTC GTCCGG TTTCCGCATTGGCCG 57 102 ST40_RS08420 1812206 .. 1812234 + -6.7 -3.23492 CTGCTGAAGGTTCAA G-CGGCAGGCGC AATCAC GCGTCTGTCGGC TCTTCGTATGTGATC 56 226 ST40_RS08460 1821065 .. 1821076 + -2.2 -3.3334 GGGCCACTGACAAAA CTCT GAGG GGAG TTCTCAAATGACGTT 45 157 ST40_RS08465 1822192 .. 1822220 + -16.7 -3.92324 AAGCGAACACGAACA CCGCCGGGCCCTT TCC AAGGGTCCGGCGA TTTAGTCTTGGGAAG 100 39 ST40_RS08470 NONE ST40_RS08475 NONE ST40_RS08480 1825256 .. 1825290 + -2.6 -3.39061 ATGCCTATTTTACAG TCGGGCGGTACACTTC ATT GGTGTGTCCGGGCCGG TGGTTTTTATTGGGG 45 104 ST40_RS08485 NONE ST40_RS08490 1828027 .. 1828038 + -5.8 -3.53012 CCGCCCAAACCCGCG CTGC AACG GCAG TTTGGCGCCGGGCAA 57 421 ST40_RS08500 NONE ST40_RS08505 1829560 .. 1829583 + -18.2 -5.1675 GTCGTTTTAAATCAA GGTGCCTGCG GTCC CGCAGGCACC TTTTTTCGTGGCTGC 100 61 ST40_RS08510 1832494 .. 1832525 + -7 -4.11216 AGACAATCTCCTCAG CCGCCCGGCCGCCC ATCA GGACAGCCATGCGG TTTTCCAGGTCGAGA 68 440 ST40_RS08540 1843722 .. 1843733 + -4.4 -3.57144 ATGCAGCACGGCATG CACT ATGT AGTG TTTGCGGATGACGAC 52 291 ST40_RS08545 1844419 .. 1844441 + -17 -4.19735 GGCAAACGGTTGTTA TGCCCGGGGC AAC GCTCCGGGCA TTTGCTTTTCAACAG 100 103 ST40_RS08550 1844863 .. 1844885 + -8.4 -2.6348 AACGGCGCACACAGG CTGTCCCTGA CCT TCAGCGACGG GTTCTCGGATTTGAC 56 244 ST40_RS08555 1845750 .. 1845807 + -14.2 -2.60496 TGTCCATTCGGCTGA CCTGACCGGACGCTTTGCCACAAGGCGG GCAG CCGCCTTGTGGCAAATC--CCGGACCGC CTGTTTCAGGCAACA 81 21 ada NONE ST40_RS08565 1848285 .. 1848296 + -7.2 -2.7682 TTCTGACGGTTCACG GGCC GGGA GGCC GTTGTGTGTCATGCG 55 476 ST40_RS08575 1849013 .. 1849024 + -7.2 -2.78816 TGCCACGCATACTGT CCGG CACA CCGG TGTGATCGGCAATGA 50 194 ST40_RS08595 1851678 .. 1851689 + -2.2 -3.30124 GGCCTGCGCATGATC TACG GCGT CGTG TTCTGACCGGTGGCC 43 8 ST40_RS08600 NONE ST40_RS08605 1853288 .. 1853313 + -8.1 -3.72576 CAGCACGCGCGCGCC GGGTGCCCGGC CGAT GCCGGGCGCAA TTTCGTAGGCAAGCG 67 471 ST40_RS08615 1854945 .. 1854968 + -13.8 -5.27335 CAACGAATGGGGGCA GGGGTGCCGG GACA CCGGTGCCCC TTTTTGTTTGCAGCG 100 67 ST40_RS08620 1856973 .. 1856995 + -16.3 -5.04601 CCTTGAGCGAAAAAA GCACGCCCG TTACC CGGGCGTGC TTTTTCATTTATAAG 100 49 ST40_RS08640 1862148 .. 1862158 + -4.6 -4.63218 GGCAGGTCATAGTTC CCGG TAA CTGG TTTTGTTGAAGAAGA 71 143 ST40_RS08645 1863257 .. 1863298 + -12.9 -2.57344 GCGGAGCGATTTCGC CGCCGAGGGCGGCGGTC AATGCAGC GGCCGCCGCCTTCACCG CTTCTGCGAAGGGTC 68 212 ST40_RS08655 NONE ST40_RS08660 1866461 .. 1866489 + -14 -3.27022 AAAACGATCAACTTT TCAGCTTTCGGA TGAAT TCCGAAAGCTGG TTGATCTGGAATGCC 95 58 ST40_RS08665 1867864 .. 1867881 + -6.9 -2.98942 CACCATCCCCCTCAT CCTGAGG AAGA CCACAGG TCTGTCTCGAAGGAT 53 200 ST40_RS08670 1868939 .. 1868952 + -2.3 -2.70354 GGCAATCCAGAAGGG CGTCG CGAT CGAAG TGGATTTCTAGACGG 38 1 ST40_RS08675 1870115 .. 1870132 + -14.1 -4.00038 AGAAGTCATAAAAAA GGGCCGC TCAC GCGGCCC TTTCTCATACTGGTA 100 179 uraH 1874267 .. 1874279 + -7.7 -5.23316 CGGACCTAAGGTCCT CCTCA GGA TGAGG TTTTTTGCTGTGCTG 100 157 ST40_RS29680 1878058 .. 1878080 + -4.7 -4.18506 GTTGAGGCAGTCATG GCGGCCGGC GGCAA GCTCGTCGC TTGTTTTCGGGCTGC 65 414 ST40_RS08720 1880032 .. 1880052 + -10.4 -5.27335 ATGATCCACCCGGGA CGCTCCTC TTCGC GGGGAGCG TTTTTGTTTGGGGCG 100 51 ST40_RS08735 NONE ST40_RS08740 1887581 .. 1887595 + -2.8 -4.1899 GAGCAAACGTCTTGG GAGGAT TGC ATGCTC TTTTCACTGAAATCC 58 293 ST40_RS08745 1888651 .. 1888675 + -3.4 -3.09516 TTCCCGGCGCGACCT GCGCCGGGAA GCCAA TGCTCGGGGC TTAACTCATGAACAC 43 70 ST40_RS08750 1889318 .. 1889332 + -3.5 -3.66654 CGTGGAAGAAGGAGG CGCGCG ATGA CGC-CG TTTGAAGTTGGCCTC 53 16 ST40_RS08755 1890723 .. 1890749 + -20.2 -5.5112 TTCAAGAAAACAAAA CGCCGCCGGAAG GTC TTTCCGGCGGCG TTTTTTGTTGCTGGC 100 54 ST40_RS08770 1894226 .. 1894242 + -3 -4.0075 CCGGCATGATCACCA CGCACAC TTCG GTGT-CG TTTCCTTGCTTGCAT 56 227 ST40_RS08775 NONE ST40_RS08780 1897003 .. 1897032 + -4.3 -4.56597 AACTGCTCGTCGGAC CAGTCATTCAGTTC CGC GAACTG-ACGACGG TTTTTGGACACACGC 70 360 ST40_RS08790 1898275 .. 1898286 + -3 -3.0792 CGGAATTCCCGGAAA GATT TCAA AATC TTACCTAGAGTATTG 43 52 ST40_RS08795 1899296 .. 1899325 + -9.3 -4.3767 AGCGGCACAACGCAG CTGG-CGGCGGA ATAAACC TCCGCCGTCCGG TTTCTTCTCGTGTCA 85 11 ST40_RS08805 1901469 .. 1901495 + -2.8 -4.58395 CCATGCCGTCGGCGA AAGTGGCTGCGG TTT CCGTGGTCACGA TTTTTCCCGCCTCGA 68 372 ST40_RS08815 1903113 .. 1903131 + -5.2 -3.53012 ACCAGGTTGTGGCGG CCGACCTT TTT GATGTCGG TTTCGCCGCAAAGGC 55 52 ST40_RS08830 1906709 .. 1906719 + -8.2 -3.36803 AGCCCGATAAGGATT GCCG CTT CGGC TTCTGCATCCAATTC 59 227 ST40_RS08840 NONE ST40_RS08845 1909201 .. 1909238 + -26.5 -3.2794 ACAGATGCTGAAAAG CCAATTGGCCCGCCAGGG TTC CCC-GGCGGGCCAATTGG TTGGTCTGGCTGCCA 100 83 ST40_RS08860 NONE glcE 1913643 .. 1913660 + -4.1 -2.50816 CCATAATTGTCACAC GCATTTC CAAC GGAGTGC CTTCATGGATCAACA 42 48 ST40_RS08870 1914232 .. 1914252 + -8.9 -4.25104 CCAGCTCGAAATAGG CCTTGGCGG ACA CCGTCCAGG TTTTGCTGAGCGCGA 79 233 glcF 1916483 .. 1916497 + -5.7 -2.85999 GCAATTCCTCGTAGA TGGGT CGACC ACCCA TGTGGTGTGCCGTCA 48 176 ST40_RS08900 1920688 .. 1920706 + -13.8 -5.61881 CTTTAAAATTCGAAA CCCGGCCG GCC TGGCCGGG TTTTTGTTTTTGAAG 100 55 ST40_RS08905 1921494 .. 1921516 + -7.6 -3.18199 CTGAAGGTGACTGGG TCCTGACGAG TTA CTCGGCTGGA TTCCCTTCCCCCTTG 59 37 ST40_RS08925 NONE ST40_RS08930 1928421 .. 1928434 + -2.3 -3.72695 TATTCACATTGTCCG GTCCG CCTG CGGAA TTTCATGAAGCGAAT 50 116 ST40_RS08935 1929345 .. 1929367 + -12 -4.72986 GGTGAAACGAAAAAA CGGCCCTG CGGGGTA CAGGGCCG TTTTTCGTGGAGGTC 100 134 ST40_RS08940 1930236 .. 1930261 + -11.8 -3.05596 ATCGAAACGGATGGT CCCCGTCTGC CTCGTT GCAGCCGGGG TTGCCTCAGGCGCTG 76 51 ST40_RS08950 NONE ST40_RS08955 1931556 .. 1931566 + -2.4 -2.64933 TCTGCATCGCGGCCT GCCG ATC CTGC TGATCTGGGTCGCTG 38 70 ST40_RS08960 1932251 .. 1932261 + -8.2 -3.15544 CCATCCTTCGAGACA GGCC TTC GGCC TTCCTCAGGATGAGG 60 155 ST40_RS08970 1933638 .. 1933654 + -7.2 -3.78904 CAGGCCGAAAATTAT GCGCCC AAGCC GGGTGC TTCTTCCCTTTGGTG 68 58 ST40_RS08995 1938002 .. 1938013 + -5.8 -3.22774 GGAAACCGGAGGAAC CTGG GATT CCAG TTCCTGATCGGTCTG 50 138 ST40_RS09040 1947974 .. 1947995 + -15.1 -4.05446 AGGCAAAATCAAAGA CGCCCCGGT TTGA GCCGGGGCG TTTGTCATTGAGGCA 100 314 ST40_RS09070 1957005 .. 1957031 + -8.7 -2.62184 ATCAGTTTGAGGCCG CCTGCCGC-AGC TTGC GCTCGCGGTGGG TGATGTAGAGCCCGC 59 31 ST40_RS09090 1960519 .. 1960542 + -4.4 -3.76224 GATCGGCGCGGTCTT GCTGGGCAGG CAGG CCGGGTCAGC TTTGCTGCATCCGAA 55 105 ST40_RS09095 1961331 .. 1961351 + -16.9 -4.93365 AAAAACGATTTCAAA GGGCTCTCC ATC GGAGAGCCC TTTTTGGTTGTGAAC 100 51 ST40_RS09110 1967195 .. 1967214 + -10.6 -3.29144 TGGCGCAGATCATCG GCAGGCCG CGTT CGGCCAGC TTCTGCAGCCGGTCG 68 446 mutL NONE ST40_RS09125 1970654 .. 1970686 + -18.5 -3.55622 TGTTACGCCTGAAAC AGAAAACCCCGGGCG ACG TGCCCGGGGTTTTCC TTTGCCGGGGTTACG 100 52 ST40_RS09140 1974130 .. 1974166 + -2.2 -3.53012 GGTGGACGTCCGCCG CGTCGCGGAGATCGTTC GTGA GAATAGTCGCCG-GGCG TTTCAAGGGCGCGGC 47 5 rsmD 1974917 .. 1974946 + -7.7 -3.53811 CGGAAAAATGGAAGT GCATCGGCACGAC CATC GCAGGGCCGATGC TTTCCAGAACGTCCA 62 238 ubiA 1984483 .. 1984499 + -15.1 -5.41143 GCTCTAACGAAAAAA GCCCCGC TCA GCGGGGC TTTTTTTGAAAACTG 100 34 ST40_RS09190 NONE ST40_RS09195 NONE ST40_RS09200 NONE ST40_RS09205 NONE ST40_RS09210 NONE lpxK 1991093 .. 1991106 + -5.2 -3.57263 CTTGACTTCGCCTGA CGCG GCTCAG CGCG TTTCCAGATACCGCT 55 46 tldD NONE ST40_RS09230 1994018 .. 1994057 + -4.1 -3.72324 GATTTCCGCGCCGGG CCTGTT-GGCCTTGGCGG TAAAT CCGCCTTCGCCGAACTGG TTCTTGCTACCGATC 54 359 ST40_RS09240 1996467 .. 1996483 + -10.8 -4.28115 TTCGGAAACAAAAAA GGCGCC GAATG GGCGCC TTTCGTTTGTTTGCT 90 64 coxB 1998525 .. 1998553 + -6.7 -2.84801 AAGCTGGAAGAGATC TCTGTCGCCGCG AAATAA TGCGGCGGC-GA TCCTGTTTGGCGATG 52 8 ctaD 2000247 .. 2000281 + -15.6 -3.55071 CGCCTCCCGGTCAAG ATCAGCACCGCGCCGG TTG CCGGCGCGGTGCTCCC TTTAAAGAAATCTGC 100 57 ST40_RS09260 NONE ST40_RS09265 NONE ST40_RS09270 NONE ST40_RS09275 2003030 .. 2003056 + -23.8 -4.55798 AACCGGCACGAGCAA CGCCCGATCCGG CCA CCGGATCGGGCG TTTTCATTTCAGCTG 100 51 ST40_RS09280 NONE ST40_RS09285 2004491 .. 2004507 + -10.8 -3.7744 GGGGCGATCAAAAAA GGGCCC CCGCA GGGCCC TTCTTCAATTCTCTT 80 247 ST40_RS09300 2006783 .. 2006794 + -3 -3.58905 CTGACGTTGCGGCCG GTTT CGCA AAAC TTGTCTCTCCACGGT 49 46 thrC NONE ST40_RS09310 2009718 .. 2009728 + -2.4 -3.01712 ACAAGGCGGAGAGTG GGGC ATG GCGC TGTTACGGCCGGGAG 42 51 ST40_RS09315 2010385 .. 2010398 + -2.3 -3.4072 CAACCCGGTACTTCT TCGCC CCAT GTCGA TTGTGATACCGGATC 45 50 ST40_RS09320 2013307 .. 2013327 + -14 -2.75992 AACGGCCTGACATTG GCCGGCAC CTATC GTGCCGGC TGATCTTGCGTCAGG 83 31 ST40_RS09345 2018132 .. 2018151 + -8.6 -3.51934 GGGGTCGTCCCCCGG TTGGCGTG GAAA CACGTCAA TGTTTATGCGGGAGA 65 232 gcvT NONE gcvH NONE ST40_RS09360 2020470 .. 2020501 + -15.2 -2.55216 GCACCGTGACTTTCC GGAACCGGCCGC-AC GAA GTCGCAGCCGGTTCC CTGTTCTGGATGGTG 83 32 gcvPA NONE gcvPB 2023641 .. 2023658 + -14.1 -5.69793 TTTCAAGGATGAAAA CCCCGGC TTCG GCCGGGG TTTTTTGTTTCCTGT 100 54 ST40_RS09380 NONE ST40_RS09385 2025972 .. 2025982 + -6.8 -3.62224 AACGCTGGATAGTCC GCAG TGA CTGC TTCTTGAACCGATGT 60 174 ST40_RS09395 2027111 .. 2027135 + -2.8 -3.36515 AACTGGTGCAGTGAC GTCTGTTCCC GTGGA GTGAACACAC TGTTTCCGCATGGCA 47 27 ST40_RS09400 2028049 .. 2028066 + -9.8 -5.04601 ATAGACACCTCAAAA GCCGCC GCGTCA GGCGGC TTTTTGGTTTCTAGA 100 283 tyrS 2029433 .. 2029452 + -16.4 -3.28712 CATCATCGATCAGAA CGGCCGGC TCCA GCCGGCCG TTGTAGCCGAAGACC 89 61 ST40_RS09430 NONE ST40_RS09435 2032946 .. 2032961 + -6.8 -3.35679 CAGTCTTTAGAAGAA CCCGAG TTTG TTCGGG TTGTAGCTGACCAGC 58 143 ST40_RS09450 2035978 .. 2036000 + -2.6 -2.90212 TTCGTATACTCACAA TGCTAACTCT GGA GGAGTCTGCA TGTATGGAATGGTGA 40 57 ST40_RS09455 NONE ST40_RS09460 2038678 .. 2038692 + -10 -3.53811 GTCGGCGCGCACGAT GGCAAG ATG CTTGCC TTTCGGGCAGCTGAG 70 317 ST40_RS09485 2043981 .. 2044000 + -5 -3.65426 GGCGTTCCAGTAAAG TTTCCTGT GCAG GCAGGAAG TTTCCCGATTTATCA 58 28 ST40_RS09510 2048525 .. 2048543 + -3 -3.54158 CCGCAGCGCAGAAGA TGCGGCCT GAC AGTCCACA TTACTTCTTCCAATA 49 16 ST40_RS09515 2049534 .. 2049556 + -12.7 -3.12327 TGACGCAAACCTCTA GACTGGCGG TCTGT CCGCCGGTC TGTTCGGTATGCGCC 81 25 smc 2053235 .. 2053249 + -3.4 -3.32844 ATGGTGCGCGCGGCT TAGGGG GCT CCCCAG TTGTCGGATCAAGCA 47 180 ST40_RS09525 2053688 .. 2053701 + -9.5 -2.55351 GAAATAGAATTTGTC GCGCC TTCT GGCGC ATTGATATGAACGAA 63 34 ST40_RS09530 NONE ST40_RS09535 2054808 .. 2054843 + -16.3 -3.54424 GACTATCGATGCGAC TCCGG-T-GGCGGCGCT CTCT AGCGCCGCCCAGCCGGA TTTAGGAGACTGGAA 100 56 ST40_RS09540 NONE ST40_RS09545 2055941 .. 2055958 + -10.5 -5.4505 TGACGAATTGAAGAA GCGGCCT TTCG GGGCCGC TTTTTTGTTGCGGCA 100 57 ST40_RS09565 2060004 .. 2060017 + -5.9 -3.71487 GCACTGCACGGTTCT GGGCG GATA CGCTC TTCTTCGGTATGGTG 60 46 ST40_RS09575 NONE ST40_RS09580 2062726 .. 2062746 + -4.6 -2.71712 GAAATTGCAGATCAT CCTTGCGG ACAAG CCGCAGAG CTTTGCAGAAAAACA 45 59 ST40_RS09585 2065120 .. 2065157 + -14.3 -4.56775 AATCGCGCCTTCTGT TGAACAAGGCGGACCGGT ACA ACCGGTCCGCTTT-TCCA TTTTTCAAACGGCCT 100 51 ST40_RS09590 2065525 .. 2065535 + -2.4 -4.08692 GCTACGATTTTTAGC ACCG TGC CGGG TTTTCCAGACCGTTC 56 27 ST40_RS09595 2067029 .. 2067044 + -2.6 -4.66537 TAACAAGCGTTTGTT TCGCTTG AAC CAAG-GA TTTTATATTGACCGA 65 335 ST40_RS09600 2068449 .. 2068474 + -9.1 -2.68279 TTGTGGTCGATGGGT TTCAGAACTGT TGAA ACAGTGCTGAA TGAATTTGGTGGATG 59 118 ST40_RS09605 2068928 .. 2068949 + -6.7 -4.06419 TATAGACCCTCTGAA GGTCGATAAG TTC CTTATC-ACC TTGTTTGTAAACGGA 68 261 ST40_RS09615 2072626 .. 2072640 + -11.4 -2.7728 TCCTCGTTTGCTCGA CCCTGC CTG GCAGGG TGGTTGAGCTTTCAG 69 80 ST40_RS09620 2073386 .. 2073398 + -3.3 -4.08767 CTTGGGCGCGTTAAA CCGTG CGA CAAGG TTTTGACGGCCTGGA 58 47 ST40_RS09625 2074344 .. 2074354 + -6.8 -2.88544 TACGGCCTTTAAAAA GGCA CAA TGCC TGTGTGAAAATCGGG 53 29 ST40_RS09630 2074570 .. 2074607 + -16.3 -2.50991 GTATCGTCCGCAAGC CTGACGCCACGGCGGGCA GTT TGCCCGCCC-GCCGTCAG ATGCTTTGTTTCAGT 89 22 ST40_RS09640 2077318 .. 2077336 + -16 -4.25104 TTGATCAATCGAATG CGGGGCCA GGT TGGCCCCG TTTTCGTCAGGCAAC 100 67 ST40_RS09650 NONE ST40_RS09655 NONE gltS 2081743 .. 2081755 + -5.5 -3.24924 GATGAGGGGCGCGGT CAGGC GGC GTCTG TCTTCTCGCTGAAAG 52 36 glyS 2085839 .. 2085870 + -13.9 -3.96216 AATTGTACTGACAAA C-AAAAAGGCGGGC CTTGA GCCCGCCTTTTTCG TTCTTTGCCTCAACG 100 63 nadA 2088727 .. 2088750 + -16 -4.43208 GCATCTATGCGATTG CTTCCGGGCC TGCC GGCCCGGGAG TTTCTTTGGGGCTCT 100 59 ST40_RS09685 NONE nadC 2091259 .. 2091276 + -5.6 -3.55444 CTGGGTCTGGATATC GAGATC GGCTGA GATCTC TTTACCGGCTACCCG 55 14 ST40_RS09700 2093911 .. 2093948 + -12 -3.21276 ATCTGCACGACCAGA CCGGACTGGGAAAGCCT GTGAA GGGCT-TCCCGGACCGG TGTTCTGGAAACCGA 69 525 dctP 2095203 .. 2095236 + -8 -3.01791 CGAATAAGCGACTGA ACTTGCGGGGCGGC CTGAAA GCCGCCCCGAAACC TGTTCCAAAGGACCT 60 34 ST40_RS09715 NONE ST40_RS09720 NONE ST40_RS09725 NONE ST40_RS09730 2100042 .. 2100057 + -3.2 -2.55999 GACCGGCATCTACCG CCGG CCGACCTT CCGG GTTGGTCTGCAATCC 40 58 ST40_RS09735 2101036 .. 2101053 + -6.9 -3.27525 CAACACGACCTGTGC GACGGCC ACCT GGCCATC TTCGCTTTCACCGCG 56 443 ST40_RS09765 2106981 .. 2107032 + -4.5 -3.37975 GAAAAGCCACTCCTG CGGGAACCGTTGGCGTGAATGGG CCGTTTTC CCCATTCAGGCCC-C-GTTCACG TTGTGGCTGCTAGCT 51 41 ST40_RS09770 2108473 .. 2108492 + -16.4 -5.74086 CCGGACGGAAACACA GCCCCCGC TTCG GCGGGGGC TTTTTTGTTTCGTTT 100 60 ST40_RS09775 NONE ST40_RS09780 2110987 .. 2111006 + -5.6 -3.14931 GCTGACGATTCCCCC GGCTCGGC GGCA GGTGAGCC TTGCTCGGCGATGGC 50 378 ST40_RS09800 NONE ST40_RS09805 NONE ST40_RS09810 2117390 .. 2117419 + -17.3 -3.21276 CCATCACTGACCCAG C-ACCTTCCGGCAG TTG CTGCCGGAAGGTCG TCTTCTCCCCAGGAC 100 54 ST40_RS09815 NONE ST40_RS09820 NONE ST40_RS09825 2120804 .. 2120819 + -7.5 -3.44051 GCTGGGCCTCAAAGG GGCCG GCGAGA CGGCC TTCTGATCATGAGCA 61 4 ST40_RS09830 NONE ST40_RS09835 NONE ST40_RS09840 2123417 .. 2123439 + -13.4 -3.24232 GGCTGCTCTCGATCC CGCCCGCTTG TTC TGAGCGGGCG TCTCTTTCAAGACAA 87 10 ST40_RS09845 2124089 .. 2124122 + -3.2 -4.67607 TTAAAAAGAGAAAAA GCGTGTCGCCTGAATT CGAA AGATC-G-CGACACGC TTTATTTGTTGACGC 67 295 ST40_RS09860 2126844 .. 2126872 + -12.5 -2.95007 ATCGTTTCCCGGTTC GCTTGCATCCC AATAGGC GGGATGCAGGC TGATTGTGTTCGCTG 79 141 ST40_RS09865 2127913 .. 2127924 + -2.2 -4.04206 CAGATAAAGCGGAAC GG-CG ATG CGTCC TTTCTGTGACGGTAC 57 227 ST40_RS09875 2129100 .. 2129110 + -2.4 -3.03124 TTGCTTGAAGAGGCC GGAC CAT GACC TGTTACGCCATCGGC 42 33 ST40_RS09880 2129458 .. 2129482 + -12.8 -4.37734 AGCACGAAAAGGAAA GGCCGGTCCC GATGA GGAACCGGCC TTTTGACTTGTTGTC 100 58 ST40_RS09925 2139216 .. 2139237 + -8 -5.47821 AGGCTGGACCGCCGC TGCCGGAC AGTGAG GTTCGGCA TTTTTTTAAATCAGT 100 13 ST40_RS09940 2141338 .. 2141353 + -11.8 -3.04461 CACCTGAATCAAAAA GGCCGG GCGA CCGGCC TCTTCAGAATGCGTG 76 60 ST40_RS09965 NONE ST40_RS09970 2145217 .. 2145265 + -11.1 -3.6682 TCAACGGGAAGGCCA GG-GATCATCTGCCGTTCCATC ATGGCC GATGGCACGGCAGACTATCGCC TTTCCGTCAGTCAGC 79 78 fabI 2152529 .. 2152549 + -12.6 -4.46656 ATTGACCGTTTCGAA TGGCCGGT TTCGC ACCGGCCA TTTTCATATTGTCCG 100 36 ST40_RS10000 2153555 .. 2153574 + -7.2 -3.14564 CGCTTCCCCATTCCC GTTCCGGCT CGT AGCCG-AAC TTGCTCAGGCCATAA 54 330 ST40_RS10010 2155573 .. 2155588 + -6.8 -3.54424 GGAACCCCTGGATGA CGTCGC ACCC GTGACG TTTCAGCCAGTCACG 58 144 aroC 2159205 .. 2159220 + -7.6 -2.7263 CTAGTTTTATCTCCA GCATGA CGTC TCATGC ATTTCAGGGAGTAAT 55 114 ST40_RS10025 2160244 .. 2160273 + -10 -2.87211 TCGTCTTCCAACAAA TTGCGG-CCCGGC TTGGT GCCGGGGCTGCGA TATCTCAGACAAACT 65 125 ST40_RS10095 NONE ST40_RS10100 2178997 .. 2179014 + -2.7 -3.53012 AAGGCCTGAGCCACG TTTGCTC GGAT GAGAAAA TTTCAGACCGCAAGG 49 32 ST40_RS10105 2179962 .. 2179987 + -20.5 -3.60151 TTCAGAAGATCTAGG GGCCGCCGGAT AGAC ATCCGGCGGCC TTGTCATTTAGCCGC 100 60 ST40_RS10115 2181114 .. 2181125 + -2.2 -2.73443 CCGAACTGACCTCCG GGGT TGCA ATCC GTTGTGTCCTCATGC 39 32 ST40_RS10120 2182808 .. 2182822 + -5.6 -2.52676 GATGAAGCCGGCTCC CCGGCA ATA TTCCGG TAAGTTACAGCAATC 46 8 ST40_RS10125 2183741 .. 2183769 + -18.9 -3.67611 TAATACGGCGTACCA TCGCCGCAGGGGA GCG TCCGCTGCGGCGA TTGTATTCCGGTCAG 100 38 ST40_RS10145 2191848 .. 2191886 + -19.7 -3.42346 GTCACCAGGTCTTGA AG-TTTCGGCCGCCGGGA GCGA TCCCGGCGGCCGAAATCG TTATGATCCCCTGTT 100 46 ST40_RS10150 2194219 .. 2194235 + -7.9 -3.36289 GACCCTGATCAGCAA GGTGGCC TGA GGCAACC TTCATTCCCGTCATC 61 16 ST40_RS10170 2199976 .. 2199986 + -2.4 -3.59979 GTTGTGGCAGTCGCC GCGG GCA CCCC TTTCGGATCAGACAC 47 283 ST40_RS10185 NONE ST40_RS10190 NONE ST40_RS10195 2206169 .. 2206218 + -3.6 -2.72463 CATGGCACTATCTGG TGCGG-GC-GAAGCC-TGTAGTCGC CAC GGGCCAACAAGGCTTTAGCTCCGCA TAGTTCGCACTGAAT 43 8 ST40_RS10200 2207151 .. 2207162 + -3.6 -3.73775 CAAGCTCGACCATCT CCGG GACA TCGG TTTCGTCCAGCTGCA 54 375 pdxH 2210990 .. 2211017 + -6.9 -3.03159 CCCAACGAGAACAGG AACCCGAGCTG CCAGTT CAGCTCGGGCA TGTTGGCAAAGTTCA 52 145 ST40_RS10250 2214379 .. 2214400 + -3.1 -3.76413 GCTGCATAGAGCACC GATACGATTT CCG GAATCG-ATC TTTCGCCTTTTGCCA 54 183 ST40_RS10260 2215854 .. 2215867 + -4.5 -4.11773 CGCGAACAGCGTTGG TGGGT CGGA GCCCA TTTTCAGGGGTGTTT 62 87 ST40_RS10265 2217565 .. 2217576 + -5.8 -3.33814 TGCCGATGTATTTTT CAGC CCGC GCTG TGTTGTGTGGCGTTT 56 198 ST40_RS10270 2218695 .. 2218705 + -4.6 -4.86033 CTGCACCATGTGCAC CTCG AGA CGGG TTTTTGTGACCCTTT 77 173 ST40_RS10275 2219955 .. 2219980 + -16.9 -4.56978 TAAGCACATCTTTCC GGAAGGGCGGC TTCG GCCGCCCTTTC TTTCTTCTTTGCCGG 100 38 pstC NONE pstA NONE pstB 2223628 .. 2223640 + -3.4 -3.73043 ACTATATTACGGGCC GCTT CGGCT AAGC ATTTTTTAGGTTTCT 51 15 phoU 2224399 .. 2224428 + -5.5 -2.71011 ATTTGCAGAAGATCT TAACGGCCGGCGC TTCG GCGCCGGTTGCGG TAATTGGAGCGAGAT 47 59 phoB 2225175 .. 2225192 + -12.7 -5.38054 GAATGGAATTAAGGA GCCCGCT TTCA AGCGGGC TTTTTGTTTCTCAGC 100 53 ST40_RS10310 NONE argF NONE ST40_RS10320 2229602 .. 2229625 + -16 -4.90266 CGTGAAATTCAAAAA GCCCGGATCG GAAA CGGTCCGGGC TTTTTCCTTGCTGCC 100 51 ST40_RS10330 2231608 .. 2231619 + -3.6 -3.56092 TGACCGCCTCGCGTG TCGC CTCT GCGG TTTCCAGACTGATGA 49 332 ST40_RS10345 2233278 .. 2233288 + -5.4 -3.47345 GAACCCCCGTCTTAA GCTT GGG AAGC TTCTGCTCTACCATT 55 101 ST40_RS10355 2234659 .. 2234671 + -4.1 -3.39908 CAAAATCTGCGCAAA CTGTT TTC GACAG TATCTTTTGAAACAG 47 398 ST40_RS10370 2237949 .. 2237976 + -7.6 -2.69151 GCTGGCAAGAAGTGC CACCGCCGGCAA CGCG TTGCTGGCCGGG TCCTGTATGGCAAAG 53 301 apaG 2239068 .. 2239078 + -8.2 -3.91716 CCCATGCGAAAAGAT CCGG ATC CCGG TTCTTTGCCAGATGG 69 194 ST40_RS10400 2242961 .. 2242978 + -14.1 -5.55769 AGACTTCAGGAAAAA GCGGCGC ACCA GCGCCGC TTTTTTGTTATCAGC 100 46 ST40_RS10425 NONE ST40_RS10430 NONE ST40_RS10440 2252230 .. 2252253 + -11.8 -3.44622 GGCAAGAGACTTGAT GTCCTCAGCCA TCT TGGC-GAGGAC TTCCTTGTCGCCCTG 74 273 ST40_RS10490 2267005 .. 2267035 + -18.3 -4.19238 ACCTGATGAAACAAG CACCCAGCCAGGC CAGAT GCCCGGCTGGGTG TTTTCACATTGCGGC 100 82 ST40_RS10495 2268288 .. 2268318 + -3.9 -2.63347 CGATCCGGAAGGGGG CAGGGGCATGAGC CGGCT GATCCTGCTTCTG TCGATTGTCGTTGGC 42 15 ST40_RS10500 2269208 .. 2269221 + -9.5 -3.23393 TTTCCGCTGGCGCTT GCCGC CGCC GCGGC TATTCTCGAGTCCAA 68 156 ST40_RS10505 2270782 .. 2270802 + -5.4 -3.28712 GGCTGCCCGATCCTG CGGAACTT TCCTC AAGTACCG TTCTGGCGAGGCGGG 52 410 ST40_RS10530 NONE ST40_RS10535 NONE ST40_RS10540 NONE ST40_RS10545 2279107 .. 2279128 + -15.9 -4.03978 GTTCAAATGAAAAAA GCCGGTGAC ACGG GTCACCGGC TTTCTGTCAGGGCTT 100 45 ST40_RS10555 NONE ST40_RS10560 2284036 .. 2284058 + -15.6 -2.87211 CAGGATAAAAAAACA GCGTGTCCCT GCC AGGGGCACGC TGTGTCCGGCAAAGT 87 52 ST40_RS10570 2286147 .. 2286168 + -11.6 -4.62168 TGCTCCACCTCGAAA CGGTCTCC AATGCG GGAGACCG TTTTCTGCTTTGCGT 95 73 ST40_RS10575 2288833 .. 2288849 + -10.1 -2.53641 CGCGCCGAAGAACCC TGGAGCG CTC CGCTCCG CTTCCTGATGCATTG 63 1 ST40_RS10585 NONE ST40_RS10590 NONE ST40_RS10595 2295867 .. 2295885 + -3.8 -3.5944 TATGTATGATTGATC GTCTGC GTTGGGG GCAGGC TTTGAGGATCTACAT 51 132 ST40_RS10600 2296311 .. 2296331 + -5.4 -3.17075 GTGTTCGAGATTGAG CG-CTGCCG ATTT TGGCAGGCG TTGGCTTCGCGCGCC 52 77 ST40_RS10605 2297356 .. 2297376 + -14.7 -5.20333 TAGTCGACCTGGAAA GGGCTGCGA TTT TCGCGGCCC TTTTTGTTGTCGATC 100 53 ST40_RS10615 NONE ST40_RS10620 2301162 .. 2301191 + -2.1 -3.36492 CGCCGCCGAGGGCTG CCGCTTCCAGGGCA AAC TGATGTG-AAGCGG TTGTCCCCTTGGCGG 44 367 ST40_RS10630 NONE ccoN NONE ccoO NONE ST40_RS10650 NONE ccoP 2308011 .. 2308039 + -21.1 -4.65263 CCTGAACGATTTGAT CCGGCGCAAAGTG TGA CGCTTTGCGCCGG TTTATTTTGAGCACT 100 77 ccoG NONE ST40_RS10665 NONE ST40_RS10670 2312378 .. 2312388 + -2.4 -3.51235 GCTGCTGAATGAGAT CGAC ATG GACG TTCTGATCTATCTGA 47 29 ccoS 2312575 .. 2312610 + -7.6 -2.70525 CCCGTGCGCCTAGCC CCATGCATTCCTTTAG GTAA CTGGAGCTATGCATGG ATTCGTTTCCGGACG 55 66 ST40_RS10680 2313422 .. 2313441 + -5.6 -2.73875 CGAGGTCGGACGGTT CATGCTCC ATAG GGAGCGGG TCGTCTTCCCCGAAC 46 169 ST40_RS10690 2314331 .. 2314358 + -2.5 -4.13767 TGTGATGTGGACGCG TCAGGCGGCCG ACTGTG CTGCCGCGCGA TTTTCCGCTGCCGCA 56 59 aroQ 2315352 .. 2315373 + -5.1 -4.98531 AAGATCATAGGCCAG C-CGCATGCG GGC CGCATGAGCG TTTTTGGTTTCCCCG 81 176 ST40_RS10745 NONE ST40_RS10750 2330109 .. 2330123 + -3.4 -3.54543 CAATGCGAAGAGGAG CCCGGC ATG GCTGAG TTTCGGGAAGTGCGT 49 218 ST40_RS10755 2331274 .. 2331300 + -9.4 -4.68103 TCTGGAGGCAAGGAA GCGGTCGGACAG CTC TTGTCCTACTGC TTTTATTGGCGTTCC 85 462 ST40_RS10800 NONE ST40_RS10805 NONE ST40_RS10810 NONE ST40_RS10815 NONE ST40_RS10820 NONE ST40_RS10825 2346492 .. 2346518 + -2.8 -2.6732 CCACCTGCTTTGAAC CGATGGGGACCA TTA TGGACCATACCG ATCTTTACATTAACG 40 28 ST40_RS10830 NONE ST40_RS10835 2348831 .. 2348856 + -7.5 -3.09803 GGTCTTTTGAAAGAG CCTCGGCGGAT GTTG ATCTGACGGGG TGTTCGCTGGAATTA 57 5 ST40_RS10845 NONE ST40_RS10850 NONE ST40_RS10855 NONE ST40_RS10860 2354739 .. 2354764 + -16.9 -4.15044 TTGCCTCACACCTCT CCCGCCCGG-CA TCT TGTCCGGGCGGG TTTATTGAGAGCGAA 100 49 ST40_RS10865 NONE ST40_RS10870 2356824 .. 2356846 + -4.9 -3.32946 GCTGGTGATCCTCCG GAGGATG-GT CAAG ACACGTCCTC TATTCTGCTTACGCC 51 169 ST40_RS10880 NONE ST40_RS10885 NONE ST40_RS10890 2360589 .. 2360617 + -11.6 -3.13371 CCTGGAACTGATGCG CGTTGCGCGGGG CACGC CCCCGCGCGGCC TCTCTTACTCAGATA 72 30 ST40_RS10895 2361091 .. 2361102 + -2.2 -2.65993 TTTCCGGCAGGACGC CTCT GGCA GGAG TGATCTCAATGTACT 38 11 ST40_RS10900 2362665 .. 2362696 + -7.3 -4.4017 CCTGAAAATACAGGA CCCCGGTGTAGAGC GATGA GTTC-GCATCGGGG TTTTCTGCCGGTTCC 79 71 ST40_RS10910 2364582 .. 2364636 + -14.4 -2.55015 ACCAGATTTAAGTTC GCG-GTTGACCAGACGGTCCGGGCCG ACAAC CGGTTTGG-CCGTCTGGTCCACGTGC TCACTTCAATACGCT 81 30 ST40_RS10915 2365524 .. 2365534 + -2.4 -2.74563 TCAACCACTCCGGCA CCTC TCC GCGG TACTTGCGATGTACG 39 272 ST40_RS10925 NONE rpmA 2367167 .. 2367200 + -16.1 -4.68908 CCGACCAGTCAAGAT CCAAGGGGGAGATGG GGCG CCATCTCTCCCTTGA TTTGTTTTGGCTGGA 100 108 ST40_RS10935 NONE ST40_RS10940 NONE ST40_RS10945 NONE obgE 2370014 .. 2370026 + -3.3 -2.62396 TGCACCCGAACAAGA GGGCT GGC ATCCC TGATGTCCCGCAGTC 40 10 proB NONE ST40_RS10960 NONE ST40_RS10965 2373352 .. 2373367 + -4.6 -3.78329 ATCCAAAACGGGTGA CGTACG AAGT CGGACG TTTCAGTTCGTGACG 58 150 rsfS 2373874 .. 2373889 + -5.4 -4.57569 GAGGCAGGGCCTCCG TCTGCT GCCG GGCAGA TTTTTCACCGGATCG 73 58 rlmH NONE ST40_RS10980 2374946 .. 2374964 + -7.4 -3.27475 GAAGGACAGGAGATG GGGTTTCC GCC GGAAAACC TGTTGTCGTAACGGC 59 45 ST40_RS10985 NONE ST40_RS10990 2377923 .. 2377950 + -14 -3.58854 AAAACTAAATCAAAA AACGCGCGCCGG TCCG CCGGCGCGCGAC TTGTCGTTCTCGTTC 95 33 ST40_RS10995 NONE ST40_RS11000 2379811 .. 2379844 + -7.3 -3.75505 GTGCTTTTTGTCCGT GAGGTGCTCCAAAGC GTCA GCATTGGAGTCCCGC TTGTCGTTTTTCAAA 65 96 ST40_RS11005 NONE fdhF 2384504 .. 2384532 + -17.5 -3.11222 AACTGCCTGAAGGCA AAAAAGGGCGGCC ACT GGCCGCCCTTTTG GTTTTCGCATTCACG 100 74 ST40_RS11030 2389832 .. 2389849 + -4.8 -3.28712 AAGGTCCGGATCAGC GCGCAG ATTTTG TTGCGC TTGTCCGGACCGACA 49 53 ST40_RS11040 2391307 .. 2391323 + -2.9 -2.67747 CGGCGTGGATAAACT TTTCCGG CGG CTGGCAA GTTCTCCTGTCAGCC 40 29 ST40_RS11055 2394083 .. 2394100 + -12.7 -5.42514 GAACAATCTAAAAAA GCTCCGG TTTT CCGGAGC TTTTTTCGTTTCTGG 100 73 ST40_RS11075 2397177 .. 2397194 + -12.7 -5.42514 GAACAATCTAAAAAA GCTCCGG TTTT CCGGAGC TTTTTTCGTTTCTGG 100 218 ST40_RS11100 2402454 .. 2402483 + -17.2 -2.62933 CTGGAACTGAAGACC TTCGGACCGGCC GGCTCA GGCCGGTCCGGA TCGTCTCGCGAATTG 90 31 ST40_RS11105 NONE ST40_RS11110 NONE ST40_RS11115 NONE ST40_RS11120 2405764 .. 2405786 + -9.8 -2.94099 GCAATTGTCCGCCTT GACCTTCCAG CAA CTGGAGGGCC TATCTGATGAGGAGA 65 60 ST40_RS11125 2408160 .. 2408179 + -3.4 -3.53012 TATCAGCAACGCGCT GCGTCTGC GCAC GCTGAAGC TTTAAGGAAAAGAAA 49 1 cueR NONE ST40_RS11135 2409326 .. 2409364 + -3.3 -3.63895 TTCGAAAAAGCGGCC TGTTGTTTGCCTGTTG CGGGCAGT CGGCAGGCAA-TAACA TTTGCGGTCGTTCAA 51 305 ST40_RS11140 2410138 .. 2410163 + -2.5 -3.54543 CCACTCGTAATGGCT TTG-GTGCCAGG AGA TCGGGCACACGA TTTCGGAGAATGGAT 47 31 lptC NONE ST40_RS11150 2411441 .. 2411451 + -2.4 -3.48276 CGACTCGACAGTGTC GGCC TCA GACC TTATGTGAAGCCGCG 47 56 lptB NONE rpoN NONE raiA 2414826 .. 2414849 + -14.6 -3.34233 AAGGATGCGGATGGG GTCGGCTTCC TCAG GGAAGCCGGC TTCTGAAACTTGTAG 95 39 ptsN 2415368 .. 2415387 + -11.4 -4.4773 TCTCTGATGCAAAAA GACCGGCT GTGA GGCCGGTC TTTTGGTTCGTATGC 93 53 ST40_RS11180 NONE ST40_RS11185 2418885 .. 2418898 + -2.3 -3.43773 CGGGATCTGACAGCT CATGC CCGC GCTTG TCTTTGCCTATCCCG 45 31 ST40_RS11190 NONE ST40_RS11195 2420734 .. 2420746 + -5.5 -3.61517 ACACAGGTATCCGGC GTCCT CCC GGGAC TTGTTGAAACCGGGT 55 42 ST40_RS11200 2421316 .. 2421327 + -3 -3.03811 TGCGCAAGGACGGTG TTCT CGGT AGAA TGATTTAAGTTTTTG 43 6 ST40_RS11205 NONE ST40_RS11210 NONE ST40_RS11215 NONE ST40_RS11220 NONE ST40_RS11225 2427359 .. 2427370 + -7.2 -3.32562 GCCGTGAACTTCGCC GGGC GCGT GCCC TTCTGACGCCTTTCT 61 8 ST40_RS11235 2430108 .. 2430120 + -2.6 -4.09685 TGTTGCCGCCCCGGC CGGT GTAAA GCCG TTTTCCCCGGTGCCC 57 512 ST40_RS11245 2432933 .. 2432966 + -3.9 -3.75629 CAATGTCTTCCATAT CGTCG-ATGCTCAG GTCGTGG CTGAGCATTCGCTG TTTCGGTTCACCATC 54 427 ST40_RS11270 2440010 .. 2440025 + -2.5 -3.11208 GGGATGGCGTGAACC GTTGG AAACCG CCGAC TGATTTTCCCTCCGA 42 7 ST40_RS11275 2441145 .. 2441160 + -3.2 -4.17048 ACCACTGTTTTTTGT CACCAC ATGA GTGATG TTCTTTTCCAGAAAC 62 190 cobA NONE ST40_RS11295 2445284 .. 2445325 + -2.1 -3.57144 GAAGCCGTCGGCCTC CCAGGCGCTATCG-CGTACT GTC AGGACGATGGGAGCACCCGG TTTGGCGATGCGCAG 49 157 ST40_RS11345 NONE ST40_RS11350 2455503 .. 2455514 + -5.8 -3.65199 CTCCGGGACCGAACG CCAG TTCC CTGG TTTCGATAAACGGTT 60 397 ST40_RS11365 NONE ST40_RS11370 2458363 .. 2458373 + -6.8 -3.86015 AGGAGGGCCTTGGTT TCCG AGA CGGA TTTATAAAGCGGGTA 65 450 ST40_RS11380 NONE ST40_RS11385 NONE ST40_RS11390 2463194 .. 2463218 + -9.4 -3.59979 TATTTCTGCCATTTA GTGCCGA-AAC GTTC GTTGTCGGCAC TTTGCAATGACGCAC 68 519 ST40_RS11435 2474748 .. 2474766 + -5.2 -2.97827 ATGTGCGCAGCCAAA TGAAGCTC TCC GAGCGTCG TGTCTGCCTTGTGTT 49 432 ST40_RS11500 2490755 .. 2490775 + -2.5 -3.17075 AGGATTCACACATAT CATTGTCAG CGG CTGAAAAAG TTGCCTTCAGGAGCC 43 84 ST40_RS11505 NONE ST40_RS11510 NONE ST40_RS11515 2496474 .. 2496495 + -2.9 -4.18018 CGATCTCCATCAGGC GCCGGGCGTG TCC CAA-CCTGGC TTTTCGGTGGGGGCG 58 398 ST40_RS11520 2502390 .. 2502405 + -3.2 -2.53876 GAACCAGCACGGGTA GGCGTGT CAG GC-CGCC TAAATTCCAATCGGG 40 25 ST40_RS11525 2502924 .. 2502934 + -3.2 -3.53444 ACTGACCAACAGCCA CGTT GAA GACG TTTCGGCCAACGTGA 49 36 ST40_RS11565 NONE ST40_RS11570 2514675 .. 2514692 + -9.1 -3.19192 CGCTCTAGACCCTCA TCCGGCC AAAG GGCTGGA TTACGTTCAATAGGG 65 138 ST40_RS11580 2517893 .. 2517907 + -7.1 -3.34398 GGGTCACCTTGCCAG GGGAC CATTC GTCCC TCTTTCAGGAGCCCG 58 376 ST40_RS11585 2519231 .. 2519265 + -2.1 -4.08064 TTCGCCAGTTTTAGA CGGATCTTGTGCGTTC TCGC GGACG-ACGAGGGCTG TTTTGAACCCGCATT 57 347 ST40_RS11600 2521970 .. 2521981 + -2.2 -3.72576 CGCTGCCTCAAACAG CC-GC TGC GCAGG TTTGGTGCAGCCAGG 50 300 ST40_RS11610 NONE ST40_RS11615 NONE ST40_RS11620 2527262 .. 2527288 + -6.4 -3.16564 AGGACCGCTCGGCGA CCTGTGCCCAGC CGA GCGGGTAACAGG TTGCTGCGCTGACAA 54 146 ST40_RS11630 2528754 .. 2528775 + -8 -3.01712 CGTATGCAAAGGGAT GG-CCGTGC GGTGA GCACGGTCC TGTTCGGGGAAAAAC 60 164 murA 2530449 .. 2530494 + -8.3 -3.05844 GTTATGGTGGCTTCA GGGTCGACATTGTGGATGGCAA GTG TTGCCG-CCAGAAGGTCGGACC TGTTCGGATGGGAAA 56 394 ST40_RS11645 2531028 .. 2531039 + -5.8 -3.35522 TTGAGGGCTCCACGA TGCC GCAA GGCA TGTTTCAGGGCATTG 56 37 ST40_RS11650 NONE hisD NONE ST40_RS11660 NONE ST40_RS11665 NONE ST40_RS11670 2534660 .. 2534674 + -12.8 -4.17556 GTTTCCCCGGCACCC GCGGGC AGG GCCCGC TTTATTCAGGATATC 95 111 infA 2534897 .. 2534915 + -4.5 -2.72344 AGGGGCGGATCACCT ACCGCTT CAAGT AAGCGGA TCCTTCAAGGTGACC 45 12 ST40_RS11680 2535600 .. 2535628 + -9.6 -4.11484 GTCGAGATCGTGTTC GGCAAGCCGATGA TCCA TCACCGGC-TGCC TTTTCAGCAGTTGGC 83 45 yacG 2535879 .. 2535902 + -8 -3.51232 CGCTCCTGACAGGCC CTGGCGGGCC ATAT GATCCGCCGG TTCGTTTGCCGGCGA 65 32 ST40_RS11690 2537983 .. 2538008 + -19.1 -4.06502 CGTTGATGACTGTCA GAAGCGCGCCA TTCG TGGCGCGCTTC TTTCGTTTGCACGTC 100 53 ST40_RS11695 2538540 .. 2538552 + -5.5 -3.08046 ATCCGGGCGACAGGC GTCAG AAC CTGGC CTTTTCGGGTCAGGA 49 156 chvE 2540868 .. 2540884 + -5.7 -3.45592 CCGGACCCTGATTGT CCGGCTC GGT GGGCGGG TCTTTCCTCGGAATT 56 228 gguA NONE gguB NONE gguC NONE araD NONE ST40_RS11730 NONE ST40_RS11735 2549007 .. 2549023 + -6.5 -5.12707 ACGCGCACAAGTGCG CTCCTCA GGA TGAGGCG TTTTTTCAAGTTTGA 86 142 ST40_RS11790 2562449 .. 2562464 + -6.8 -3.75824 AGCACTCAAGATCGC GGCCAG CGGG TTGGCC TTGTCTTCTCCCATG 63 282 ST40_RS11835 NONE ST40_RS11840 2571212 .. 2571235 + -6 -3.07622 CGAGCTTCTGAAAAA GCACA-AGCTG TTT CAGCTCTGAGC TTCACTCGGATGTAT 52 4 ST40_RS11850 2573635 .. 2573662 + -6.2 -4.66609 CGAGATCGTCTACGA GGC-GTAACCGGA AAA TCCGGCTCCAGCC TTTTTCCCTCCACTG 75 19 ST40_RS11855 2575565 .. 2575580 + -11.8 -3.04144 GCTGATAGGAAAAGA CCGGCC AGAA GGCCGG TCTTGAACGTCAGGA 76 36 ST40_RS11875 2578242 .. 2578253 + -3.6 -3.17392 TTCGTTTGATCTGAG CCGG GCCT TCGG TTCGGTTCGCGCCTG 47 32 phnD 2582765 .. 2582798 + -18.9 -3.06183 AGACAACTGGCTTTG ACGGCCCGCCGTGAGT TGA ACTC-CGGCGGGCCGG TTCAATCGAGGTAAA 100 40 phnC NONE phnE NONE phnE 2585234 .. 2585265 + -21.6 -4.13995 GCAAACTGCAAATGA TGGCGCGGCAGCGG GAAA CCTCTGCCGCGCCA TTTGCTTTGTGGAAA 100 82 ST40_RS11910 2586507 .. 2586536 + -8.5 -2.70932 CGCTGTCTCGAAGGA TGGGCCGCTTGCT CCTG AGTATGCCGCCCA TCCTTCGAGACGCGC 57 123 ST40_RS11935 2592289 .. 2592304 + -3.2 -4.11216 CTGTCATCTGGAAGA CGGC TCGAAACC GCCG TTTTCGGCGTGCCAG 58 177 ST40_RS11940 2594361 .. 2594392 + -5 -3.78934 CGGTCACCTTCAGAC CGAAG-GCGCGCAGG TAG CCGACGAGCTCTTCG TTGTTGTCGAAGCCG 57 389 ST40_RS11950 2595306 .. 2595326 + -7.5 -2.50994 CGGCTGTCATATTTG CAGTCGGAC CAG GTTCGACCG GTTACTGCCGTTCCC 53 105 ST40_RS11955 NONE ST40_RS11960 2597799 .. 2597829 + -10.4 -2.52464 CGCACCAGCACGAAG CGCTCGCTGAAAAG GGC CGTTTCGGCAAGCG TGCCTTCGGAAACCG 60 471 katG 2600750 .. 2600777 + -25.6 -4.90778 ATTTGAGACAGATGG CGGCGCCCCGGG GTTT CCCGGGGCGCCG TTTTCTTTGGGTGGG 100 55 fabI 2601763 .. 2601779 + -2.2 -4.58283 CATTCTTGGATAGGA GGTCCT GATGA AGGACA TTTTTGACGCGCTTG 65 28 ST40_RS11980 2604522 .. 2604564 + -8.2 -3.97368 AGGCTAAGACATGTT TCCGGCAATCCGGCACAGGT GGC GCCGATGCCCGACCGCCGGA TTTGTCCGTTAAGCA 74 138 ST40_RS11985 NONE ST40_RS11990 2606763 .. 2606775 + -3.3 -3.32343 TCTGATGCGATCTTT TGACC TTC GGCCA TTCTGGCGGTATGAG 47 23 ST40_RS11995 NONE ST40_RS12000 2608583 .. 2608606 + -5.3 -5.67063 GATGAGGTCACGTTT TCCTGTTTC TGCTGC GAACCAGGA TTTTTTTGTGATGAG 100 36 ST40_RS12005 2609687 .. 2609724 + -20 -2.53263 TCGCAAAGCCGATTG CCGGAGCAGCCTGG ACCACCCACC CCAGGCTGCTCCGG TCCCTTACCGGTACG 100 130 ST40_RS12010 NONE ST40_RS12015 2611141 .. 2611166 + -16.9 -3.12351 GTGTAAAGAACTGGA GAGCGCCCGGA CAGG TTCGGGCGCTC TTGACTATGAGACCC 100 66 ST40_RS12030 NONE fabF 2615099 .. 2615130 + -13.2 -5.21709 TTGTAAAATGAGAAA TCCCATATATGAGA AAAT TCTCATTTATGGGA TTTTTTGATGTCGAA 100 79 ST40_RS12040 NONE ST40_RS12045 2616291 .. 2616326 + -11.1 -3.74224 TTGCTCCGCAGTAGA GGC-GGCGGAGGCCCG AGGCC CGGGTCTCCGCTGGGC TTTGCCTGGTTTGCC 79 52 ST40_RS12060 2619824 .. 2619840 + -5.1 -4.05788 CCGCCGAGTAAAACA ACGGAAA AAT TTTCCGG TTTCGTTTAAAAACA 63 82 ST40_RS12065 2621593 .. 2621613 + -18.3 -3.61398 CTGACAACATCGAGA CCGGCAGGG CTT CCCTGCCGG TTCTTGCAAGGCGGC 100 42 oppB NONE ST40_RS12075 NONE ST40_RS12080 2625437 .. 2625469 + -9.7 -2.87132 GGTCAATCCAAAAGC GGTTGGCCGCCCGCA GCC TGTGGGCTCCCGGCC TGTGTGAGCGGGGAG 65 77 ST40_RS12095 2628631 .. 2628652 + -13.7 -5.26316 ATGGAAATGGAAAAG GGCGGTACC TGTC GGTGCCGCC TTTTTTGTCGAGTGG 100 53 ST40_RS12105 2631490 .. 2631503 + -5.3 -2.70932 CAGGCGGCATATGTC CTGAA AGAA TTCAG TGATTACGCCACGCA 46 383 ST40_RS12115 2632690 .. 2632710 + -6.8 -3.28924 CGAACCCTGCCTCCA TGGCCAGC AGCAC GCTGCCCA TTGTGACACCGAGTG 56 183 ST40_RS12130 NONE ST40_RS12135 2636718 .. 2636740 + -12.7 -4.72272 TCACTTTCCCAAAAA GGCAGCGGG CTGTT TCCGCTGCC TTTTTGCTGCGGCAA 100 61 ST40_RS12140 2637632 .. 2637646 + -11.4 -3.01712 TGCCGGCCTGCCAGC CGCTGG GAT CCAGCG TGTTCACCCGGACAA 68 285 ST40_RS12155 2640757 .. 2640771 + -8.5 -2.71924 CCGGGTGACGAAGCC GCCGC CTGAC GCGGC CTTTGCAGCACACTG 57 17 ST40_RS12160 2641438 .. 2641451 + -8.1 -3.57792 AATGCCGTCGATCGT GCGTG TGAG CACGC TTTCCAGATAACTGC 64 249 hmgA NONE ST40_RS12180 NONE ST40_RS12185 NONE ST40_RS12190 NONE ST40_RS12195 2649052 .. 2649083 + -4.4 -2.93252 GCCGGATGTCAACAT GTTCTGACGTGTCA GGAC TGGCATGTCACACC TCCTTCTTGGGGGAT 45 229 ST40_RS12205 NONE ST40_RS12210 2651052 .. 2651098 + -6.6 -3.8698 CGTACGCATTGAGGC TTTTGACGAGGGTGTGAGAG ATTCGCC CAATCACACCCTCGGTAGAA TTTCAGTTTCACTTG 65 72 ST40_RS12215 2653776 .. 2653805 + -17.2 -5.5074 AAGGCAACACTTCGG CACCCCACCGGG CTCCGA TCCGGTGGGGTG TTTTTTATTCGATTG 100 53 ST40_RS12220 2654948 .. 2654971 + -12.5 -3.49618 GTAATAAAGACTGCC GGGCAGCAT GACCCG ATGCTGCCC TTGATTGTGTCACAG 85 47 ST40_RS12225 2655911 .. 2655927 + -2.9 -3.67285 AAGAGAGGCGCGCGA CTGATGG AGC CTTTCAG TTTCGCCTATCTTCT 51 22 ST40_RS12230 NONE ST40_RS12235 2657705 .. 2657727 + -13.4 -3.74872 CATCCTGAAAGAGAA CCGGTGCCGG ACG TCGGCACTGG TTTCGTGCAATCACT 89 54 ST40_RS12240 2659134 .. 2659152 + -2.4 -3.16742 ACACTCCGGCGACAA CTGCTT CCAGCCA AAGCGG TTCCTGAGAATTGAC 43 0 ST40_RS12245 2662532 .. 2662553 + -13 -5.63236 TCGCGAAAAAAGAAA CCGCCCGT ATGTCC ACGGGCGG TTTTTGTTTTTGCCT 100 235 ST40_RS12270 2667687 .. 2667708 + -7.3 -3.37198 CCCAGCTGTTCCCGA TGAGCCTAG CTTT CTAAGCTCA TATTCTGTGTCGGAG 61 455 ST40_RS12280 2668271 .. 2668281 + -3.2 -5.01732 AAAGACAATGCGCAA CAGT TTC GCTG TTTTTTGAACAACTT 76 501 ST40_RS12285 NONE ST40_RS12290 2670759 .. 2670769 + -2.4 -3.41602 TTCTCAAACGTTTTA GGCG GAT CGGC TTATGATCAAGTCCG 45 25 ST40_RS12295 NONE ST40_RS12300 2678532 .. 2678550 + -3.1 -3.41602 ATCTTTTCTGAACTT GCGAACA ATGGG TGTTCAC TTATGATCCGATCGG 47 356 ST40_RS12305 2679278 .. 2679292 + -5 -5.03145 GCACACCTAATATTT TCAATC TTT GGTTGA TTTTTTCGGAAATTC 82 112 ST40_RS12310 NONE ST40_RS12315 2680466 .. 2680482 + -2.1 -3.50302 CTAAGCCCTTACCTC CCACGCC GGA GGCCTAG TTAATCTTCTTATTA 47 9 ST40_RS12320 NONE ST40_RS12325 2682293 .. 2682314 + -2.1 -4.72846 GGTGGCGATGATGCG GGCCATGGCG TTG CGGCC-GGCC TTTTTCAGTGTCTCG 72 435 ST40_RS12335 2683295 .. 2683334 + -18 -3.5525 TTGAACCTCCGCTGA C-GATATGGCCTGCCGGGT TTT GCCCGGTGGGCCATATCTG TTTGCGCAGGTGTCT 100 47 cysQ 2685882 .. 2685903 + -5.7 -3.14463 TGCAAAATTGCGCGG GCGGTCGGC CCGT GCCGAACGA TTGATACGGCCGGTT 52 46 cysD NONE cysN 2688866 .. 2688894 + -13.2 -5.04601 GGCATGCGAAAGACA GCCATCCGCGTT GCAAG GACGTGGATGGC TTTTTCGTTTGTGAG 100 83 ST40_RS12365 2690425 .. 2690448 + -10.2 -3.67976 CGAAAGGGCATACGC CGCCGACGGG GTGG CCTGTCAGCG TTTCCACTTCATCAA 73 265 mnmD 2693271 .. 2693286 + -2.4 -4.28548 GGCGAAAGCCTTGAA GTGGGC GATT GCCTCC TTTTACTCCGTAACT 60 27 bla 2695227 .. 2695258 + -12.3 -3.15008 ACGACTGAGTGTTCT TGTCCGGGCGGAT CCCTTC ATTCGCCCGGGCG TCCTTTCTTCTGGAA 76 33 ST40_RS12395 2695915 .. 2695935 + -5.4 -4.11805 GGTTCACCAGCCGCC CCA-GTCGG CATC CCGGCGTGG TTTATGTGGTCTGAT 65 284 ettA 2699390 .. 2699417 + -10.6 -5.24129 CCCTGTTTCCCGAAT G-TGCCGGCCC CGGAAAC GGGCCGGCATC TTTTTTGTCCGGCGG 100 76 ST40_RS12410 2700419 .. 2700439 + -4 -2.73875 GCCGAATTCACGGTT GTC-GACGG CAAG TCGTCCGAC TGATCTTCGGCGGCA 43 2 ST40_RS12415 2702700 .. 2702721 + -3.7 -3.29511 ACCGCAAATACTGGG GCAGCGGA TCGATCT TCCGC-GC TTATGAAAACATCAA 47 55 ST40_RS12420 2703456 .. 2703466 + -2.4 -2.61334 TGGAAACCTGTTTCC CGAG GGG CCCG ATATTCTCTAGTCTG 38 59 ST40_RS12425 2703935 .. 2703962 + -7 -2.71924 CCGCAAATCACATCC CGGGT-CGTGTGT GAC GCGCACGGATCCG CTTTAAGCACCGATG 52 52 ST40_RS12440 2707364 .. 2707413 + -3.6 -3.71913 CGGTCGTCGCTGTGT TTACAGGATTGAG-CCAGCGGCCT GATC AGGC-GCTGGTCTCAGTCGAGGAG TGTTTTGCGTGTCAA 53 1 ST40_RS12445 2709367 .. 2709380 + -3.1 -4.09685 TACTTCGGGAAAATG TCAGC TTGT GTTGA TTTTCCGAAATCCGG 58 87 ST40_RS12450 2710416 .. 2710448 + -8.3 -2.76261 GGACGACGCAAGGCC CCCGCTGACGCTTTG ATC CTAAGCGTGGGCGGA CTTTGCGGCTTCCAC 57 180 ST40_RS12465 2713731 .. 2713755 + -9.9 -3.31144 GAGCGACTTTTGCCG GATCGGTGCAG GCC CGGCTCCGATC TTGTGAACCTGCGCG 68 219 ST40_RS12475 2715557 .. 2715567 + -4.6 -3.27525 ATCCGTCTCCGAAAA CCGG AAG TCGG TTGCGTTTCAGGGAG 49 162 ST40_RS12480 2715950 .. 2715960 + -5.4 -3.34344 CTTCCTGAAAGTCGA GTGA CGC TCAC TTACTTGCGAAGTGC 53 22 ST40_RS12510 2721641 .. 2721660 + -4.2 -3.57144 CGGACGGAAATTCCA TCGGCATG TTCG CACGCTGA TTTGAGACTGACAGG 52 6 ST40_RS12515 2722518 .. 2722543 + -6.9 -3.81027 GATGGTCGTTGCTAT CCGGACATACTC GTT GA-TACGTCCGG TTTGCGTTGGTTGGA 63 139 ST40_RS12530 2725571 .. 2725590 + -10.7 -3.60792 AGAGGAGGCCAGCTT CACGGCG ACCTCC CGCCGTG TTTCGGGATTGAGAC 73 421 ST40_RS12540 2727690 .. 2727701 + -7.2 -3.17212 ATGGGTCCGGTAGTA GCGC ACCG GCGC TTCATCGGCTCCTGA 54 169 ST40_RS12550 NONE ST40_RS12555 2730845 .. 2730860 + -10.4 -2.79312 ACGGTAATGGGCCTG CTGCCG CAAT CGGCAG TCTGATCCGGCCTTT 66 5 ST40_RS12560 NONE ST40_RS12565 2732682 .. 2732692 + -4.6 -3.44186 AGCGACATCTTCCTG CCGG TTT TCGG TTGGTTGATCTGGTT 51 49 ST40_RS12570 2733459 .. 2733484 + -4 -2.94218 CCTCAGCGGTCGCTT GCCG-CACG TCTGGTGTT CGTGGCGGC TGTATGGTCCACCAT 44 78 ST40_RS12575 2734952 .. 2734965 + -5.9 -3.58533 ACACTGATTCATCGA CCGGT TTGC GCCGG TTTCACGCCTTCTAG 57 154 ST40_RS12580 2735626 .. 2735646 + -4.7 -3.05343 CTTCTAACGTTAAAC TCGCGGT AACTAGG ATCGCGA TGTTGACGCTGTGAA 47 141 ST40_RS12585 2737271 .. 2737301 + -2.5 -2.81045 CAGCCACCTTGCTTT TGTCCGCATTGAA TTGTC TATAGTGCGGCCA TGGTGTTCTGGATCC 39 154 ccmI NONE ccmE NONE ST40_RS12600 NONE ST40_RS12605 NONE ST40_RS12610 2743308 .. 2743330 + -4.8 -4.4078 TGCTGGCCTTGTGGA AGAGATCCTG AAT CAGGGTTTCG TTTTCCTTGCGCAGC 68 488 ST40_RS12635 2748036 .. 2748054 + -3.1 -4.45577 CACTTGTGCCCCGGT CGTGGCGG TTTT CC-TCACG TTTTCTGCCATTTGT 64 167 ST40_RS12640 2749859 .. 2749902 + -13.2 -4.86731 CTGCTAAACCCTGAC TGACTGGCGGCGGCGA CTCTCACATCCA TCGCCGCCGTCAGCCA TTTTCTTTAGGGCCA 100 138 ST40_RS12645 NONE ST40_RS12650 NONE ST40_RS12655 2755060 .. 2755070 + -2.4 -3.81027 TAGGGAGGGACCGCA CCGG CGG CCGA TTTCAATTCATTCGC 52 70 ST40_RS12660 2756052 .. 2756083 + -15.2 -3.44146 GCTACGGACAACCTG GCTCGCCTGGAGGGT AAA GCCCTTCAGGCG-GC TTCCTTGTCGGCAAG 95 57 ST40_RS12675 NONE ST40_RS12680 NONE ST40_RS12685 2763892 .. 2763902 + -3.2 -3.01712 GGAAACCGTCATGCA GGTA AGC TGCC TGTTCGCAACAAGGG 43 105 ST40_RS12690 2765960 .. 2765985 + -10.6 -4.28994 ACGGGTCTGCTCTTG CAAACTGTGA CGAACA TCACAGTTTG TTTTCATGAATCCTG 90 180 ST40_RS12695 NONE ST40_RS12700 2769938 .. 2769969 + -18.9 -2.71712 AACTGCCAGAGATAT CGTTCGGTTCGGA AGATTA TCCGAACCGAACG CTTTAAAGGCGACGG 100 97 ST40_RS12705 NONE ST40_RS12710 2772356 .. 2772376 + -12.5 -3.36452 GAAATCTGAAGAACC GGCGGGCCG TTC TGGCCCGTC TTGCTGTTAGGAAGT 84 48 ST40_RS12715 2773031 .. 2773065 + -18 -4.4078 TGAATTTGGCGAACA CAGTCCTGCTTCCTCG GTC TGAGGAAGCAAGACTG TTTTGATTCCAGGGG 100 67 ST40_RS12725 2774682 .. 2774696 + -5.6 -3.50047 ACACCCTGTAGAAAC CTCGGG TCA CCAGAG TTCTGGCTTTATCCG 55 260 ST40_RS12750 2777391 .. 2777402 + -7.2 -3.07816 CACATGCCGCCAGTG CGGC AAAT GCCG TTCGATCGATGCCGC 57 47 ST40_RS12755 NONE ST40_RS12760 2779419 .. 2779433 + -4.9 -4.08394 GGATCCAGTAAACTG CCGCG CTCGC CGTGG TTTTCAGCCGGGTCT 62 159 ST40_RS12770 2781374 .. 2781405 + -2.3 -4.2558 TCTTTATGTTCTTTT GACACCCAGATTGT TTTAT ACATTC-GAGTGTC TTTTGATAGGAAATA 60 509 ST40_RS12810 2790639 .. 2790651 + -3.3 -3.05384 GTCTGCGGGGACCGG CCGGG CGA TTCGG TTCGGTCGGAGCAAA 43 72 ST40_RS12815 NONE ST40_RS12820 2792376 .. 2792399 + -7.4 -3.29511 CATATGTATTGAGGT G-GAGCTTCGC GAG GCGAAGCGCGC TTATCGGCAGCTGAA 59 416 ST40_RS12825 NONE ST40_RS12830 2795204 .. 2795221 + -7.1 -3.57797 ATTGAGTAGATTAAA TTCATTG ATTT CAATGAA TTGTATCCGTTTGGA 60 142 ST40_RS12835 2796055 .. 2796093 + -3 -3.49653 GGCATGAAGAACGGA TCTATCCGGTTGGTGGCT GAA AGGCTGTGGCCGGATAGG TTGTGTCAAAGTCCT 49 69 ST40_RS12840 2796682 .. 2796715 + -11.1 -3.18054 ACTGCATCGACAGCC GAACAGGAGAACAAA CATG TTTGAGCTCCTGTTC TGTTCCCTTCTCACC 74 2 ST40_RS12845 2797946 .. 2797988 + -11.9 -2.95106 GGCCACTAGAACAAA AACATCCCGGCGGGACGGT GGGAA ACCGTCCTGACGGGGTGCG TATCATTCACTTCTT 75 32 soxR 2798971 .. 2799003 + -11.2 -2.55 AGCGGCTTTGGGAAA GTTGCCGGGAC-GCC AACA GGCTGTCCCGGCTCC TGACTTCACCTGTTG 68 47 ST40_RS12865 2800695 .. 2800724 + -7.1 -3.70033 TTTCTCCTTCCGACG GGACATGTGCAGAC ATT GTCTGC-CAAGGCC TTCTGTCTCTTGATG 62 316 ST40_RS12880 NONE ST40_RS12885 2803889 .. 2803908 + -10 -2.77192 GGGTGGCATTACGCT CGTCCGTG ACGG CACGGATG CTTGTTGCAACGCTT 64 145 gatB NONE ST40_RS12895 NONE ST40_RS12900 2806714 .. 2806724 + -2.4 -3.63968 GGAAAGACCTCGCTG CCGG CTG CCTG TTTCAAGCTTTCAGG 50 43 ST40_RS12915 2809659 .. 2809675 + -4.4 -3.62775 AATTTTGCCCAATAT C-GAGGC AAGT GCCTCCG TTGTTCGCGCATCAT 55 249 ST40_RS12920 NONE ST40_RS12925 NONE ST40_RS12930 2812063 .. 2812083 + -15.4 -5.45802 GCTGAACGCTTGAAG CGCGCGGC GTCGA GCCGCGCG TTTTTGTTTTCGCAA 100 50 ST40_RS12935 NONE ST40_RS12940 2814492 .. 2814530 + -8.1 -3.59979 ACTCAAAAAAGTCAT C-CGCAAAGATCCGGTCC ATCA GGACCGGATCGTACCGCG TTTCCGCTCGCCACA 64 314 ST40_RS12960 2816507 .. 2816540 + -11.8 -3.54459 ACCGGTATCGACAAC CT-GACGCGGCAGCA CAGTT TTCTGCCGCGTCCAG TTTCCGGCCCCTTGC 81 75 ST40_RS12975 2819211 .. 2819224 + -6.7 -2.82156 GAGTGAAATACGATA TGCTG TCTG CAGCA TCCTGTTGGTTATGC 50 503 ST40_RS12985 2822970 .. 2823018 + -2.2 -2.52464 TCACGACGGTGGCTT CGGCTGCGCTTCTTCTGCAGGCC GGCG GGCAGGTAGGGGCAGCG-GGCAG TGCCTTGAGCGACGA 38 89 ST40_RS12990 NONE ST40_RS12995 2825728 .. 2825757 + -3.5 -3.26405 GAGGCAATGTCATTC TGGACGC-CTGACG ACG CGAGAGGGTGTCCA TCATTTTTGGATCAA 47 15 ST40_RS13000 NONE ST40_RS13005 NONE ST40_RS13010 2829427 .. 2829451 + -8.6 -2.85351 GGACGACTGGGTCTG CGGACATCTT GCCGA AGGGTGTCCG TGTCGTCTGGGACCG 57 96 ST40_RS13015 2832101 .. 2832114 + -2.4 -3.94634 GCGTCGAGTGAGACG GACT TCAGGT AGTC TTCTTTGGCCTGGTC 54 125 ST40_RS13065 NONE ST40_RS13070 NONE ST40_RS13075 NONE ST40_RS13080 NONE ST40_RS13085 2848481 .. 2848494 + -8.1 -2.72144 GGGCCCGGATTTGCG TCGGC GCTT GCCGA GTTTGCAGCCCATCC 57 192 ST40_RS13095 NONE ST40_RS13100 NONE ST40_RS13105 NONE ST40_RS13110 NONE ST40_RS13115 NONE ST40_RS13120 2855525 .. 2855540 + -3.2 -3.29471 CTTCCGGCCCCAGGG CCTCTT CAAG GGGAGG TTGCTCTGATGGAAC 45 1 ST40_RS13125 2856519 .. 2856543 + -10 -3.63515 ATTGCCGTCAGGTCA GGCGAGCGGTG GAAA CACCGC-CGTC TTCTTCACGGTGCCA 74 45 ST40_RS13135 2858581 .. 2858597 + -4.4 -3.53012 GGGCACCTTGGTCAG CTTTCC GGTCA GGAAGG TTTCGAAGGCGGCGA 52 316 ST40_RS13145 2861542 .. 2861554 + -6.9 -2.87132 TGATGTTGCCGTAGA GGCGG TTC TCGCC TGTCTGGACCACGGC 51 120 ST40_RS13165 NONE ST40_RS13170 2866285 .. 2866309 + -6.3 -3.91072 CTTCTGGTCGATGGA GGTGTCACCAT CTG ACGGTGGCTCC TTTGTCGCGGTTTGG 63 11 ST40_RS13175 NONE ST40_RS13180 2868846 .. 2868864 + -5.9 -3.72576 TACGCGGACATGGTG CGCAGGC GTAAA GCCTGAG TTTCATCAACACACA 60 8 ST40_RS13185 NONE ST40_RS13190 2870837 .. 2870876 + -14.2 -4.56597 GGGATCTTGCCTGCA CAATGACGGCCGGACGCG GAGA CGCGTTCGGCCGTTGACG TTTTTGAGGAAGGGA 100 47 ST40_RS13200 2873560 .. 2873572 + -9.1 -2.63596 GCTCTCGATTGCAGT TCCGC AGC GCGGA TACTCTCCGGTAGCC 56 238 ST40_RS13210 2876288 .. 2876331 + -7.2 -4.71061 CCTCTCCGGCTTTCT CAATGGC-GGGTGCCGGGCGC AAT GCGTCCGGCACCAGGCCGCCC TTTTTCCGTCTCCCT 86 43 ST40_RS13215 NONE ST40_RS13220 NONE ST40_RS13225 2879548 .. 2879594 + -9.6 -4.13945 AACAAGCGAACAGAA GCG-TGCCGT-CTATTGT-CCGG AAAG CCGGGACAGCAGCACGGCAACGC TTTTGACCTGAAACT 83 39 ST40_RS13235 NONE ST40_RS13240 2882992 .. 2883026 + -9.9 -3.17456 TGACCCATACCGCAA AGCGGATGCTCGCGC CCGGT GTGCGGGCATCCACC TTCACTCCTTTCCTT 68 38 ST40_RS13245 2884023 .. 2884034 + -2.2 -2.73875 AGACTGCGGAGGCGA CGTT GATG AGCG TCCTGTTCCACAGCC 39 20 ST40_RS13250 2884846 .. 2884861 + -2.4 -3.31144 TCCGAAACTCAGGAG GGCCCG GACA TGAGCC TTCTGACCATAAGGA 43 13 ST40_RS13255 NONE ST40_RS13260 2887887 .. 2887897 + -2.4 -2.73124 TTCACCACGCTGAAG ACCG TTG CGGC GTTTCACGGGTGAAC 39 2 ST40_RS13265 2888780 .. 2888800 + -3.9 -2.87564 GCTGCATCTGAGGAT TGATCAGCC TCG GCCGGATCA TGTATCGACAGGTCC 44 30 ST40_RS13270 2889425 .. 2889442 + -10.5 -4.7254 CAGGCAGGAAGTCAG GGGGCTG GATT CGGCCCC TTTTTGCTGCGCCAT 100 200 ST40_RS13275 2890595 .. 2890625 + -15.4 -3.5511 AGCAGTCTCAAGAAC GCTCCCGCCCGG TCAGCTT CAGGGCGGGAGC TGTTTATCCATCAAA 95 40 ST40_RS13280 NONE ST40_RS13285 NONE rbsD NONE rbsK 2894549 .. 2894560 + -3 -3.95852 GCCCAACGCATTGCC TGAA TGCA TTCA TTTGCTTGATCGGAT 56 23 ST40_RS13300 2895690 .. 2895725 + -12.2 -2.94126 AGATCGATACCGTCA TTTATTTCAAGCTTGA AATT TTAGGCTTGAAATAAA TATCTCCCTGTGGTT 75 95 ST40_RS13305 NONE ST40_RS13310 NONE ST40_RS13315 NONE ST40_RS13320 NONE ST40_RS13325 NONE ST40_RS13330 NONE ST40_RS13335 NONE ST40_RS13340 2905097 .. 2905117 + -3.1 -2.91582 CGGTCTGTTCGGAGC GCGTGCATG ATC CGGGAACGC TATCTCAATGCGCTG 42 16 ST40_RS13345 NONE ST40_RS13350 NONE ST40_RS13355 NONE ST40_RS13360 2907964 .. 2907981 + -8.5 -4.15565 ATCAGCCTTGAGAGT TCAATCC AGTC GGATTGA TTTTCAGCTGATCCG 77 70 ST40_RS13365 2908449 .. 2908469 + -18.3 -4.87133 GTTGCGCTATCTATA GCCCGGCAC CTC GTGCCGGGC TTTTGTTTACAGCCT 100 59 ST40_RS13370 NONE ST40_RS13375 NONE ST40_RS13380 2912253 .. 2912291 + -5.7 -2.71984 AATGACCACGATCGA CACTGCCGTGCCCGGGA AAAAA TCCCGGGCTCGGCCCAC CTTCTACTTCCGTTA 50 36 ST40_RS13385 NONE ST40_RS13390 NONE ugpC 2915100 .. 2915122 + -7.6 -3.15663 CCTGGCAGCCTGAGT GCGTGGGG AACTCAA CCCCTCGC TTGCTCAGGCTGACT 57 28 ST40_RS13420 2920808 .. 2920830 + -7.8 -3.82824 TTTCAAGCAACTGGT TCTGATTTCT TTT AGAAAACAGA TTGTTCTGCCTGATC 68 276 ST40_RS13425 2922738 .. 2922769 + -14.4 -3.5394 CCCCAGGGACGTCTA TATCCCGGGCAGGC GTCT GCTTGCCCGGGGCA TTTGACCGGAGCTTT 95 156 ST40_RS13430 NONE ST40_RS13435 NONE ST40_RS13440 NONE ST40_RS13445 2926602 .. 2926636 + -18.7 -5.0133 TTTTTAGAAACAACA CAAAGGCCACCTGGA AGTGA TCCCGGTGGCCTTTG TTTTTTGGGGCCGTC 100 47 ST40_RS13465 2933051 .. 2933074 + -5.9 -3.15708 TGGAAGAGGCGAGTT TGTCGGCTC TCTGGT GGGCCGTCA TTGCGTCTGGTCTCT 52 45 ST40_RS13470 2934188 .. 2934199 + -2.2 -3.72893 CGTTCGGGCCGATGA CGTT GTCA GACG TTTCCTGGAACCATG 52 519 ST40_RS13480 2936299 .. 2936317 + -5.9 -3.54459 TGGGCGCCGTCCAGA CGGGCGA GCTTG TCGGCCG TTTCCAGAACCTTGG 55 379 ST40_RS13505 2942320 .. 2942354 + -10 -2.80816 AACCTTTGAGTAAGT GGCGGGTGAGGC CTTGAAACTCT GCCTCACCCGCA TCTGCTAGGTGACCC 64 52 ST40_RS13520 NONE ST40_RS13525 2946119 .. 2946129 + -2.4 -4.7254 GGACGGGGCAGGTTG CCAG TGA CGGG TTTTTGGTGGCACAT 68 74 dapA 2947155 .. 2947181 + -18.1 -5.52384 GTGCGATTGGAAATC TGAAGCGCCCC TGCTC GGGGCGCTTCA TTTTTTTGATCAAGC 100 88 ST40_RS13550 2951906 .. 2951941 + -14 -3.48105 GGTGCATGTGCTGGG ATGTGTCACGCCCTGC AGTG GCAAGGCGTGACACGA TGTTTCGTCAGTTCA 95 196 ST40_RS13585 NONE ST40_RS13590 2959926 .. 2959951 + -16.9 -5.4505 TCCTCTGGAAACCTG GCCGGTACGAC ATTT GTCGTGCCGGC TTTTTTCTTGCCAAC 100 52 ST40_RS13600 2963703 .. 2963720 + -9.9 -3.34398 GTTCTGGGAAAGACC GACCTTG TCGG CAAGGTC TCTTTGCGAAAGACG 68 401 ST40_RS13610 NONE ST40_RS13615 2966366 .. 2966414 + -3.8 -3.66018 TGCAAACGTGGCGTC GATCGC-AACGAGGGCGGCAAGCA GCT TGCTGTCCGTCA-CGATGGCGATC TTGTTGAGATGCTGC 51 220 phnC 2969946 .. 2969963 + -2.5 -2.79183 CCGCCGGTGCGATGA CCCCGGC GGCA GCAGCGG TCTGATCCGGCTGCG 39 3 phnD 2970961 .. 2970983 + -22 -4.41548 AACTTCCGATCTCCG CGCGGGCCGG TCT CCGGCCCGCG TTTTCTCAAGTATCG 100 45 phnE NONE phnE 2973344 .. 2973366 + -10.4 -4.24075 CCTGAAAGTGATACA CCCGGCGCGG TAA CGGCACCGGG TTTATCTTGATAACT 90 51 ST40_RS13660 2975010 .. 2975024 + -4.3 -3.61715 GTCGCCGCCCATCCG GATGA TCGTC TCATC TTGTTGCAGCAAATC 54 373 ST40_RS13670 2977172 .. 2977185 + -3.7 -3.48395 ATCTCGTCTGCATTT GCGCG ACCA CGCCC TTGTGTCAGGAGAGT 51 52 ST40_RS13675 NONE pbpC 2985075 .. 2985130 + -7.7 -3.73775 ACCCCGCCTGCGCAT CCGCTTGTTTTGCGAGAG-TTCGC ATGGAATGA GCGAATCTTCCGAAAAACATGCGG TTTCATCGCCGTGGG 65 132 ST40_RS13685 2986987 .. 2987027 + -5.3 -4.48987 CTGAACTCCAGTCAG TCACG-CGGCCCGGCAGG CTTCAA TCTGCCGGGCCGTCCCCA TTTTGATTCTCCGAG 70 71 ST40_RS13690 2988565 .. 2988592 + -20 -4.73682 ACTCGAGGTTTGATG GAAAACCCGGCG GAAA CGCCGGGTTTTC TTTTGTCTTGTCGGG 100 50 dapA NONE smpB 2991657 .. 2991671 + -4.9 -3.04853 GTGGACATGGACAAA GCGGC CGTGA GCTGC TGTCGTTTCGCTTTC 46 303 ST40_RS13725 2994776 .. 2994805 + -9.2 -3.06261 GTCCGGGTAAAACTG CGGCCGGAACTG TCGGTC CAGGTCAGGCCG TCTTCGCCCTTGAAG 60 174 ST40_RS13735 2999334 .. 2999353 + -2.8 -3.56704 GAAAGGTTTATTCAG CCGCAC TGCCAATC GTGTGG TTCCTTTGCTGGGGG 49 111 lepB 3000309 .. 3000320 + -7.2 -2.71791 CGGCTTCCCGGCAGA CCGC ACGG GCGG ATTTCGGCGACACGT 50 288 ST40_RS13790 3009105 .. 3009121 + -4.3 -2.87211 GACTACTGAGGCTTG ATCGGGC AAT GTCCGAC TATATCGCAGACCAT 46 32 ST40_RS13795 3009940 .. 3009951 + -7.2 -3.15544 CCATCCTTCGAGACA GCGC TGAC GCGC TTCGTCAGGATGAGG 57 193 ST40_RS13810 3013565 .. 3013584 + -7.8 -3.61103 AAGCGGGTAGGGCTT TGCGCCAT ACCA AAGGCGCA TTTCCAGTCCCATTG 64 214 ST40_RS13830 3017837 .. 3017847 + -3.2 -3.80746 TTTCCGTCCCATTCC GTTG AAA CGAC TCTTCTTTTTGCGAG 54 47 ST40_RS13835 NONE ST40_RS13840 3019342 .. 3019355 + -3.7 -3.14261 AAAACAAGGCCAATG CCGGC TGAC GGCGG TTGAATCAGTTTTTG 45 18 mmsB NONE ST40_RS13850 3021033 .. 3021065 + -12.7 -4.59773 GCGGAACATTCAGAT GACAAGGCACCGCCC ATT GGGCGGTGCTTTCTG TTTTTCAGCCTCAAG 100 48 ST40_RS13855 3022706 .. 3022745 + -18.1 -3.3785 TACAATTGTTTCCTG TCCA-GAAACGTCGGCCT TGATC AGGCCGGCGTTTCATGGA TTCTAGCTCCATTCG 100 57 ST40_RS13860 3023241 .. 3023258 + -2.7 -3.922 AGTTTAGATTTGGCC CAAGGTT GCGA AAACTTG TTTCGTTCAAGATTT 56 236 ST40_RS13865 3024755 .. 3024768 + -3.8 -3.55563 GGGGGCTAATCGCGG GCTC GCTCAG GAGC TTTAAGACATGAGAT 51 32 nrdR NONE ribD NONE ST40_RS13880 3027053 .. 3027094 + -2.2 -2.91695 AGCTAATATCATTTA CCGCCTTAACCACGG-GACG AACT CGTCACCG-GGATATCGTGG TCCTTTACGAATGAG 40 67 ribH NONE nusB NONE thiL NONE ST40_RS13900 3030697 .. 3030709 + -4.7 -2.91274 AGCTTGACGAGGCGC GCCGC TTT GCTGC TATCGTTACCCTCCC 46 134 ST40_RS13905 3032961 .. 3032981 + -19.7 -4.67011 CCCCGGAAAAAGAAA GCCCCGGCC GAT GGCCGGGGC TTTTTGCATAGGGTT 100 43 ST40_RS13915 NONE ST40_RS13920 3034902 .. 3034915 + -8.1 -3.44284 GGACTTTGTCTGGAA GCACC ACTC GGTGC TGTTCTTGGTAGCGA 64 191 plsX 3035996 .. 3036007 + -2.2 -2.92653 CAGAAGCCGCGCCGA CATC GGAA GGTG ATTTGTGAGCGTAAT 40 6 ST40_RS13930 3037047 .. 3037084 + -9.9 -3.7941 GTTCCGGTTGACCGG CT-CGCCGCAAGGCCGTA CCG TATGGCCTTGCATCGGAG TTCTTGTGCAAAATC 76 83 ST40_RS13935 NONE ST40_RS13940 3038119 .. 3038131 + -4.7 -5.01732 GTTTGAAAAGTTTCG CCAGG AAG CCAGG TTTTTTGCCGGCCTT 83 73 ST40_RS13950 3039944 .. 3039966 + -6.2 -2.71364 TGGGATCGACATCGC GGCGGCTTTC AAG GAAGACTGCC TGCTTGCCGAAGTCC 46 497 ST40_RS13965 3042578 .. 3042597 + -5 -3.54935 TTGACTGGATTGCGC CATTTCTG GCGG CAGACATG TTTCCCCGGAATTTG 55 51 ST40_RS13970 3043928 .. 3043950 + -7.6 -2.87548 CGAAAGCCAGGCCTG TGCCTGAGCG ACG CGTTCCGGCG TATAGTGATGTTCTT 55 162 ST40_RS14000 NONE ST40_RS14005 3050475 .. 3050497 + -18.4 -5.68438 GACGCCAAAAACCAG GCCGTCCCGG TTT CCGGGGCGGC TTTTTTGTTTGCTGA 100 39 ST40_RS14010 3051664 .. 3051677 + -3.1 -4.07568 GGGTACTCCAGTAAA CGGACA CGA TG-CCG TTTTGGGAAACGAGG 58 41 rfbC NONE rfbB 3053464 .. 3053474 + -3.2 -3.50853 CATCTGCCGGTGTTC CATG ACC CGTG TTCTGCTTACGGGAG 49 21 rfbD NONE rfbA 3055245 .. 3055268 + -3 -3.57239 AAATACTTGGCGAAA TTGGCGCAAG GAGC CTAGGGCCAG TTGTAGTATTTACCT 49 8 ST40_RS14035 NONE ST40_RS14040 3058159 .. 3058171 + -3.4 -5.03145 CCACGCCTAAGGTAT TGCA AGGTC TGCA TTTTTTGCGGAATTG 76 62 ST40_RS14075 3067137 .. 3067159 + -13.5 -2.9518 CCGCCTGAGGAAGAT GTTGGCGAC AGTTG GTCGCCAAC TGTCTAACTGTTGCC 81 33 ST40_RS14085 3069876 .. 3069889 + -2.3 -3.21416 CCGCAAAACGTCCCG GACCG CTTG CCGTC TTGCTCCTGCACCTA 43 269 ST40_RS14095 3071187 .. 3071204 + -14.1 -4.67942 AGTACAGGCAAAAAA GCCCGCC AATC GGCGGGC TTTTCGTTTGTTCAG 100 160 ST40_RS14115 3075396 .. 3075431 + -11.9 -2.98823 GCGCACTCAACACCC GGTTCC-GGCGCGG-CA CGAA TGACCGCGCCAGGGGCC TGTGTCTGCAGCAAG 68 324 ST40_RS14130 3077610 .. 3077623 + -2.3 -4.2349 GGAACTTGGGCTCCA GAGCG GTCT CGATC TTTTCGATATCGCGC 60 247 ST40_RS14170 3084924 .. 3084943 + -9.2 -4.55023 ACGCCACACAAAAAA GGCAGGTC CTGA GACCCGCC TTTTCTGGTATTCGG 89 159 ST40_RS14185 3088349 .. 3088373 + -7 -4.06182 ATTCTTCGGTCGAAT GCGTCCACGG GGCGG CCGGGGGTGC TGTTTTTCTGAATGG 68 523 ST40_RS14195 3088865 .. 3088887 + -3.3 -3.29829 AAATCGAAATTGTCG CGGCCGCTT AGGCG AAGCAGCAG TTCTCGGCAAATCTG 45 15 ST40_RS14200 3089549 .. 3089560 + -3 -3.72576 ACTGTTATGCGTTAG TATC TTCG GATA TTTCCTGGCCGGAAA 51 26 ST40_RS14205 NONE tdh 3092409 .. 3092453 + -16.2 -3.06796 TCGACAAGAGAATAA TACTCATTTTGAGCATTA TTCTCTTGC TAATGCTCAAAATGAGTA TTAGATGAGATGCAG 100 504 ST40_RS14220 NONE ST40_RS14225 3095162 .. 3095187 + -9.6 -2.92613 GAAACGCCGGCAAAG CGGGCGGTGC GTTCCA GCTCCGCCTG TAGTTTGGCCTCCCG 59 148 ST40_RS14235 NONE ST40_RS14240 3098136 .. 3098146 + -3.2 -4.07687 ACTGGGGCTTTGGCG GCTG CTC TAGC TTTTCCGGCAGAAGT 58 16 ST40_RS14255 3101042 .. 3101054 + -2.7 -3.85748 GGCCGGAATCTTGAA CATTT TTA GAATG ATTTTTTTGAACTAA 54 113 ST40_RS14260 3102021 .. 3102056 + -17.6 -4.28111 AATGCTTAGATCTTT GGC-CGGGGGCGCGTGT TTA ACACGTGCCCCCGCGGC TTTATTAATGATCTA 100 66 ST40_RS14265 3103107 .. 3103130 + -16 -5.7946 AATTGAGGTATTGGT GGGCTGACCG GAAC CGGTCGGCCC TTTTTTTGTTCAAGA 100 44 ST40_RS14270 3103909 .. 3103919 + -3.2 -2.70932 CCAGAGTGATCCCAG CTTC TCC GAGG TGGTTGAGCAGAAAA 41 32 ST40_RS14275 NONE ST40_RS14280 3106186 .. 3106221 + -3.8 -3.43217 TTGCCGCAGGTTCAC TGGCAGCGCCTGCAAA GCTT TCTACAGGCCCAGCCG TTCGTTCCGTTTGCC 49 77 ST40_RS14290 3108900 .. 3108916 + -6.5 -2.62983 TTGAACCAGTGACCC CTCCCGT GTG AAGGGAG TGCTCTCCCGCTGAG 49 203 ST40_RS14300 3111691 .. 3111701 + -6.8 -3.83026 AGCGCCGCGACAACG CCGT CGA ACGG TTTGGTGTGAACCGC 63 432 rpiA NONE ST40_RS14320 3115494 .. 3115515 + -11.5 -4.18506 GGTCATGTCCGGCTT TCGGGCCGC GCAA GCGGCCCAA TTCTTTTGGAAATGG 88 110 gor 3117071 .. 3117099 + -16.7 -3.9941 TCAGAAAGTCAGGAG CCGCTACGGGGCA ACT TGTCCCGCAGCGG TTTCATTCTGCAGGC 100 53 ST40_RS14345 3122396 .. 3122408 + -2.6 -3.90744 ATGCCCGCGGCCAGG GTGC CGATT GCGC TTGTTTCCAGCCCGC 54 98 ST40_RS14355 3124758 .. 3124788 + -10.5 -5.03747 CTTCCGTTACGTTAT C-TGAAAGGGCGGC ATTT GCCGCCCTTTTGCG TTTTTTCCGGAATTT 100 53 ST40_RS14360 3125447 .. 3125463 + -2.2 -4.09685 ATGCCTTCGGGCATG GCCC ATCACGACC GGGC TTTTGACAGGTGCCG 56 43 ST40_RS14365 3127331 .. 3127371 + -11.1 -4.33182 GCAGAAAGCTACCGC CTCATCCTTCGAGACGGCG TTA CGCGCTTTCGCAGGATGGG TTGTTTTGTGGATCG 91 115 ST40_RS14370 NONE gltX 3130303 .. 3130315 + -6.9 -3.40403 TCGGGATCTTCAAAG CGCGG AAG CTGCG TTCTGGTCAGCGGGG 56 277 ST40_RS14390 3133649 .. 3133671 + -18.4 -4.94262 AGATGAAGTTGTGAG GCGCGCGCCT GAT GGGCGCGCGC TTTGTTTTTCGTCTG 100 62 ST40_RS14395 3134311 .. 3134325 + -2.8 -3.01726 GGCCAAGGGAGCAGT GTGC ATTTCCA GCAC CTTTCTGTAGGCCGG 43 72 ST40_RS14410 3136516 .. 3136533 + -7.7 -5.25803 GCTGCTGCGAGACGG TCGGCAT GCGC ATGCCGG TTTTTTCTGCCAGTT 100 223 cysS 3140751 .. 3140761 + -6.8 -3.89346 GCTCGGCGCGGCGGT GCTG AAG CAGC TTTCTCCGATCACAC 65 145 ST40_RS14435 NONE ST40_RS14440 NONE cimA NONE rarD 3144420 .. 3144432 + -6.9 -3.54424 AAGAAACCAGCTGGC CGCGG CCA CTGCG TTTGGCAGCATAAAG 60 89 ST40_RS14465 3148385 .. 3148411 + -15.2 -4.65895 AATGTCATAAATGAA GGCAGGGGATCG GAA TGATCCTCTGCC TTTTTGCATCAGCCC 100 160 ST40_RS14470 NONE ST40_RS14475 3151101 .. 3151116 + -10.4 -3.33315 GCCTGATCATTGTCG CAGGCC ACAT GGCCTG TTGTCGGCATATTGG 68 238 ST40_RS14485 3152276 .. 3152290 + -2.1 -4.25104 ACTGGCTCAAGTGGG TCGCA AACCG TGTGA TTTTCATGAAAAGCA 60 11 ST40_RS14490 NONE ST40_RS14495 3154066 .. 3154088 + -5.5 -3.47941 TTCTGGTTCAATTAG GCCTCCTCG ACAAA TGAGGAGCC TTCTGATGCTTGATG 55 79 ST40_RS14500 3154853 .. 3154884 + -14.5 -4.13767 GGATGAGCCAGCACA GGAACGGTTCTGG CGAAGA CCCGAACCGTTCC TTTTGGGCTGAAAGG 100 35 ST40_RS14525 3162485 .. 3162497 + -3.3 -3.80207 TCCACGCGCCCTGTA CGACC AAT GGTAG TTTAACGTTTTGTTA 54 519 ST40_RS14530 3163319 .. 3163349 + -8.3 -2.70298 GAACCCCAGCGGTGG CTC-CGCCGA-CGAC GCG GGCGATCGGCGTGAG ATTGTGCTTGGCCAC 53 387 ST40_RS14545 NONE znuB NONE ST40_RS14555 3167962 .. 3167978 + -2.9 -3.35934 GCATCCATTTGATTT CCGAGAC ACT GTCTTTG TTCTAGGATGTCTGC 47 59 ST40_RS14560 3169159 .. 3169183 + -7.7 -3.06696 TGCTCGTCTGAAGCT GGTTGCAGGTG CAC CGCCAGCCACC TATCTTCGCCGCAAG 57 30 ST40_RS14565 3169820 .. 3169831 + -3.6 -2.56715 TGCACGCCTTGTTGA TCGG CGTT CCGG TGGCTTGATAGCGGT 42 6 ST40_RS14570 NONE ST40_RS14575 3172099 .. 3172128 + -3.5 -2.6381 AGGGCCCGAAGAGGC CCGCCTATCAGGAG AAT CTGCTG-TGGGCGC TACTGTCGCCATTAT 42 51 der 3173546 .. 3173582 + -10.7 -2.77958 AAACGGGGCTGAGTG GGGAGGGCAGCCTGCCA TTT TGCCAGGCTGCCAGCCA GTATTCTTCTTTCCT 66 29 ST40_RS14585 3174758 .. 3174774 + -2.2 -4.60889 ACGAAGCCAAGTCCT TCGTAG AACGC CTTCGA TTTTTCGAGGTCATT 68 336 fabD NONE fabG 3187666 .. 3187682 + -5.1 -2.62184 TCGAATTGCACAGTT GGCCA AATAAAC TGGCC TGGTGTGCGGCGACA 46 144 ST40_RS14660 3188024 .. 3188040 + -2.2 -3.452 CTGGAAGCCAACAAG TAAGGG TAACC CCCTTC TTGTGAATGTTTGAA 45 23 fabF 3189382 .. 3189431 + -17.4 -3.30441 TGCCGCATAACCCAT TCAAGTTCTTCAGGCCGGTCCGA TTCTC TCGGGCCGGCCTGAA-ACTTTGA TTGTGACAACTGGTC 100 31 mltG 3190632 .. 3190642 + -2.4 -2.71712 GCCACATCCAATTGA CCGG AGC CCGC CTTTGCGGCGGGCCG 39 26 ST40_RS14675 NONE gmk 3192790 .. 3192804 + -4.2 -3.86897 AGCGTAGACGTGAAA CTGGAT CTC ACCCAG TTTCTGGACAATCAG 59 523 ST40_RS14720 3202999 .. 3203015 + -10.8 -4.39568 CTGGGCAAAGAAAAA CCCGCC GGGAA GGCGGG TTTTCGTATCTGACT 93 101 ST40_RS14725 NONE ST40_RS14730 3204688 .. 3204709 + -5 -4.37711 GTCAGAAACATCAGC GGCCAGCC CATCCA GGCCGGTC TTTTCCGTTTCGTAG 68 342 ST40_RS14755 3210717 .. 3210736 + -5 -5.17786 GCTTATCGCAAGAAT GCTCAG TCCTCGCT CTGAGC TTTTTCATTTTCTTC 90 8 ndk 3212307 .. 3212327 + -16.1 -5.24799 TGAGTTGACTGAAAA GCCGGTCCC GTC GGGGCCGGC TTTTTCTGTTTGTGC 100 52 ST40_RS14770 3213606 .. 3213624 + -10.3 -5.42259 AGCTGAACGGAAAAA GTGCGTG ACATC CACGCAC TTTTTTTGGAAATGA 100 35 ST40_RS14775 3214111 .. 3214130 + -6.4 -2.80816 GGATTTCGGTCCACG CGGGTG AAACGAAC CACCCG TATAATGGGTAAAAG 50 19 ST40_RS14780 3216314 .. 3216334 + -2.3 -4.23045 CCGTGTGGGTGAGGG CCGTCTGAC GCT GACTGCCGG TTTGTTAGGTAATTG 60 18 ST40_RS14800 NONE ST40_RS14805 3221734 .. 3221745 + -3.6 -3.54424 AATTTGAACTTCTCG CGCC TGCA GGTG TTTAGGGGCGTGGCG 51 118 ST40_RS14810 3222021 .. 3222048 + -14.2 -5.04249 CTCACTCACGAAAAA GGCAATCGACTG TCTC CTGTCGATTGCC TTTGTTTTTTCCGGG 100 123 ST40_RS14850 3231558 .. 3231569 + -3.6 -3.75153 GCCAACCACCGGAAC GCGG GATT TCGC TTTCAGTTCCCAAAG 54 420 ST40_RS14880 3237427 .. 3237446 + -10 -3.28712 AGGAGGCATTTGCGT TGCCGCTA CCGC TGGCGGCA TTGTCACGCCCGCCG 68 361 ST40_RS14895 NONE ST40_RS14900 NONE ST40_RS14905 3242740 .. 3242767 + -9.9 -2.92192 TCGAGAATGTGAAAC AGGCCTTTCAG TTCCTC CTGAAAGGCCA TGTCGTTCGGTGGAA 62 469 ST40_RS14915 3245729 .. 3245769 + -7.6 -2.96979 TCGTTTTGCTGCAAG CGGAGAAAGC-CGTCCGGCC TAC GGCCAGATGAGCGTT-TCCG TCTCGTTGGTGTTGC 56 94 ST40_RS14930 NONE ST40_RS14935 3249751 .. 3249762 + -3.6 -3.06569 GGCGTTGAGGCAGAA TGGG CGTG CCCG GTTTTGCCGGATTGA 45 100 ST40_RS14940 3252029 .. 3252044 + -4 -2.83403 ACGGCAAAAACGAGG TTAGCA TGAC TGCTGA GTTTCATCCGGCACG 43 22 ST40_RS14945 3253592 .. 3253613 + -15.9 -3.51597 AGGCTGGGGAGGCAG GCGGCAGAG ATTA CTCTGCCGC TTCTGATTCAACGTT 100 63 ST40_RS14955 3255592 .. 3255622 + -8.9 -3.30701 TTTCGCGTTCAAAAG GGGAGAGGCAAGC CTACC GCAAGCCTTTCCC TTGACTTTCGTCCCG 65 58 aspS 3257494 .. 3257528 + -2.1 -3.06183 TGCGTCTGAACTTGC CGGACGCCTGATAA CAACCTAC TTG-CGGGCGACCG TTAAATAGGGATAAC 42 15 ST40_RS14965 3259444 .. 3259462 + -16 -4.93696 GCACAAACAAGAAAA GCCCGGAC AAG GTCCGGGC TTTTTGCTGTTTGAA 100 57 ST40_RS14980 3263621 .. 3263634 + -2.3 -4.64766 CGGTTGGGACAGACT CTTGC CCGT GCCAG TTTTTGGAGTGTCCG 65 104 ST40_RS14985 NONE ST40_RS14990 NONE ST40_RS14995 3268618 .. 3268635 + -9.8 -4.87328 CTCACGAACTTGAAA GGCGGC CTTCGA GCCGCC TTTTGTCTTTCTCTC 100 56 ST40_RS15015 NONE ST40_RS15020 3271888 .. 3271902 + -7.1 -4.58283 GGACCGGAGGTTCCT TGCGG ACCTC CCGCA TTTTTCGGAAACTTC 78 121 ST40_RS15025 3272833 .. 3272862 + -6.3 -3.36273 TGCGTGTTCGGCCAG CGCCTCGTTCTCG CGTT CGACGGCAAGGCG TTCGTGTTCCAGAAA 52 85 ST40_RS15045 3276716 .. 3276742 + -10.2 -3.28592 CTTTTTGAATTGATC GGGTGACAGG CGGACTA CTTGTCACCC TGCTTTTTCGCTTCC 71 53 ST40_RS15065 3279678 .. 3279689 + -7.2 -3.25341 GAATCGCAAAACCTC GCGC TCAC GCGC TCTTCATATTAAGGT 59 132 ST40_RS15140 3297290 .. 3297337 + -15 -2.62735 AAGTAGGGGTGGTTT TCTTGTGTTGTGACGCTGGGACC TTT GGTTCCAGCGTC-CAGCGGAGGA TAATATGCCGACTGT 83 118 mdlC 3299079 .. 3299115 + -10.9 -3.14564 TTAGGAGAGGCGATT TG-GTTGGCTGGCGGC TGACCT GCCACCAGCCAACACG TTGCTGAAACCATCA 69 158 ST40_RS15155 NONE ST40_RS15160 3303895 .. 3303920 + -16.9 -4.2018 CACAACAATAATAAA GCCCGGAGCTT CGCA AGGCTCCGGGC TTCTTTTGCGCATTT 100 52 ST40_RS15180 3308687 .. 3308698 + -3.6 -3.1272 CGGCGATGCCTATGC CGGT TCGT GCCG TATGTAGTTTTATCC 45 7 ST40_RS15185 3309431 .. 3309448 + -3.4 -2.58861 GGCGGTGTGGAAGCG TTCGTG AAGAAC CACGGA GTTGTACGCATAATA 40 48 ST40_RS15190 3310680 .. 3310716 + -17.4 -4.87665 CGGGGCGGTCTGAAG GATAGCCGGTGCAGGGT TTCG ACCC-GCACCGGCTTTC TTTTTATGCGTGCAA 100 78 ST40_RS15200 3312277 .. 3312290 + -2.4 -4.17355 CTGTGACAGGTAACC GTAC CGGAGC GTAC TCTTTTTTCCCATTC 56 69 ilvD 3314319 .. 3314346 + -16.2 -4.13654 AAACCGCAACTGCAA CGCCCTGCGCCC GATA GGCCGCGGGGCG TTTGTCATTTCAAGG 100 65 ST40_RS15210 3315793 .. 3315809 + -3.8 -4.21997 ATTTGATCAATTATT TCAATT GCTTA AATTGA TATTTTTGTTCATTG 60 226 amt 3319332 .. 3319344 + -5.5 -3.03243 GGTTCCGTTGACAGC CGTCG TCA CGATG TCTTGCAGGGTGCCT 49 209 sthA 3326978 .. 3326994 + -7.9 -3.6502 CCAACTTCTGAAGTT CGCTGCC GAA GGCAGGG TTTACCTGGCCACTG 64 299 ST40_RS15260 3329525 .. 3329563 + -18.3 -3.46068 AGTCTTGCCATACCC CTAAGAACCGATCCCGC AACTC GCGGGATCGGTTTTTCG TCTTTGGCTTCCAGG 100 39 ST40_RS15275 3332487 .. 3332499 + -4.8 -4.18018 TACGAAACGGGCCGG CACG GGAGA CGTG TTTTCGATCACCAGA 65 180 ST40_RS15285 3333902 .. 3333917 + -7.6 -3.09452 CGGCCCTGGCAACAA GGATGA AGGC TCATCC TGTCTCTTGACAGGT 57 20 thiO NONE thiS 3335386 .. 3335400 + -2.7 -2.66271 CCTGTCGCCGATGCA GGGAG GATGA CGCCC ATGTTTGAAGTTTAT 40 16 ST40_RS15300 NONE ST40_RS15305 3337144 .. 3337157 + -4.5 -3.03635 TGGTCGATCAGATTG CTTGC GGAG GCAGG TGTTCCCCGGCTTTC 46 393 ST40_RS15315 3339550 .. 3339580 + -12.4 -5.5208 CGGACCAAGTCCGGT CTGGCGCTCCCGGC TTC GCCTGGAGCGCCTC TTTTTTGTCTTGTAA 100 48 ST40_RS15320 NONE ST40_RS15325 3340727 .. 3340739 + -3.3 -4.60924 GCACTGGCTGTTGGA CGCAG CAG CTGCC TTTTTCGGGCGTTTG 67 66 cydD NONE cydC 3344716 .. 3344737 + -7.2 -2.74461 TCAAGATCGACACAG GCCCGGTC CCCTCC GACAGGGC ATTTACCCGTCGATC 55 239 ST40_RS15340 NONE cydB NONE cydX 3347787 .. 3347806 + -15 -4.72272 GTTGGAAAATGAAAA GCCCCGGA TTGC TCCGGGGC TTTTTGCTGGACCAG 100 63 ST40_RS15360 NONE ST40_RS15365 NONE ST40_RS15370 3351937 .. 3351976 + -10.1 -2.74263 CGCATGTAAGCAGAG TTG-A-TCCCGCCGGTGGC ATGG GTCACCGGCGGGGCTTCAG GTTTCCAGCTGCCGT 64 32 ST40_RS15380 NONE ST40_RS15385 3354543 .. 3354571 + -7.6 -5.09225 TGAGGCAGCTGAAGA G-AAACCGGG-AAC GGT GTTACCCGGTTTGC TTTTTTCGGTCAGAT 91 209 ST40_RS15405 3357580 .. 3357599 + -2.2 -4.81306 AAAAATTAACTTATC TTCTGCGAA AAA TTCGT-GAA TTGTTTTTTATTGCC 68 81 ST40_RS15410 3359119 .. 3359129 + -3.2 -3.2794 ACAGAAACGGCAATT CTTC GAC GGAG TTGATCTCAATGACA 45 76 ST40_RS15415 NONE ST40_RS15420 NONE ST40_RS15425 3374701 .. 3374717 + -3 -3.34902 GAGCGCCTGGTCTTC GATGAA TTTCT TTCGTC TCTTGTATCGTGAAG 47 71 ST40_RS15430 3376372 .. 3376388 + -7.9 -2.59431 TTCTTGACGGTAAAG CCTGGCC AGT GTCCAGG TCACTTCTCAACAGG 54 55 ST40_RS15435 3377161 .. 3377181 + -9.8 -2.79915 GAGCTTTTGAAAAGC CGCGAAAT TTGTT ATTTCGCG TCTACTAAAGTCGAT 64 31 dusA 3378549 .. 3378563 + -9.2 -3.18264 TTGCGGCCGGTAGCC GGCGCG CAA CGCGTC TTCATAGGTCAGGAC 61 285 cobT 3382538 .. 3382570 + -9.8 -3.14878 CTTTCAGGAATTGAA GCGGCCTGAAACCGC TGAT GCGGAT-CAGGCCGA TCTTGCCTTGCCGGA 67 45 ST40_RS15475 3384919 .. 3384950 + -2.4 -2.54655 TCGAAAATAATTCTC ATTTCGGTGAGAAT TGAC ATTTTCATTGAAAC TCAGTTACGAGTTTT 38 51 ST40_RS15480 3385575 .. 3385591 + -2.2 -3.22841 ATCCGTTCCGGCCAG CGAACC CCTGA GGTTCA TTCGGTCTTCTGGTT 43 57 ST40_RS15500 NONE ST40_RS15505 NONE ST40_RS15510 3392389 .. 3392400 + -2.2 -2.50016 CGCGGGCATGAAGAG CGGA GTAT TCTG GTCTTCATGCTCGGG 38 88 ST40_RS15515 3393016 .. 3393052 + -7.2 -4.1964 CTCGGACGAAAGCTC CCGGGCAGC-CGCATTG CCGA CCTTGCGGGCTGTCTGG TTTTCGGATGTTGCC 71 115 ST40_RS15535 3396066 .. 3396079 + -5.9 -4.62872 GAGCGAGCCAAAACC GCCGG TCAT CTGGC TTTTTGCAAGTTCGT 76 284 ST40_RS15565 3401249 .. 3401266 + -4.8 -3.36273 TGAAGCAGGCTTGCC GGCGTA CTGGAA TGCGCC TTCGTCTTCGAAAAA 49 141 ST40_RS15575 3403561 .. 3403571 + -2.4 -5.06816 CACGGTAGAACTCTC GGCG GTC CGGC TTTTTCTTGGGAACT 78 259 ST40_RS15620 3411584 .. 3411605 + -13.7 -4.72986 GACGAGACAAGTTTT GGCCACGGC GAGA GCTGTGGCC TTTTTCGTCCGGGTG 100 81 ST40_RS15625 3413111 .. 3413131 + -11.9 -4.11692 CGCGCCGACCTCGTT CCGGCAGAA TAG TTTTGCCGG TTTTCAAGGTCGCTG 91 14 ST40_RS15635 3416018 .. 3416030 + -9.1 -2.78384 CGCCGCTTGACGGTG CCGGT GCT ACCGG TATCGTCCGCGCGCA 60 31 ST40_RS15640 NONE ST40_RS15645 3417384 .. 3417412 + -18.2 -3.35639 CTTTTAGATAACCGG CCGGTGTCCTGC TGAAC GCAGGGCACCGG TTGCTTGAACGTCTT 100 55 ST40_RS15655 3418941 .. 3418957 + -15.1 -4.70887 GCATCAAATAAAAAA GCCGGGC AGG GCCCGGC TTTATTTCTTGATAA 100 64 ST40_RS15685 3424784 .. 3424813 + -8.5 -4.72188 AAATCATTGACTGGC GTGGCCGGGAACT TACG GGTTCCTGGCCGA TTTGTTTTGGATTGA 90 74 ST40_RS15700 NONE ST40_RS15705 3430804 .. 3430816 + -10.5 -2.82933 TTCCCGGGCCGTTGG GGCGG TGT CCGCC TGTAATCAGTTCACC 61 436 ST40_RS15740 NONE ST40_RS15745 NONE ST40_RS15750 3446174 .. 3446201 + -4.9 -3.85698 CGTGAGCAGTTGCTC TC-CAGTTCCGC GGCGG GCGAAACTGCGA TTTCTGGAGCCGAGG 58 418 ST40_RS15755 NONE ST40_RS15760 3448717 .. 3448748 + -5.2 -3.86346 CGGCTTCCTTTGCGA GCTCCAGAAAGAGTG CTC CGTTC-TTCTGAAGC TTTGTGACCCGCTCA 59 395 bmt 3460732 .. 3460747 + -11.8 -5.00616 TCAGGGTTTTAAAAA GGCGCC AATA GGCGCC TTTTTTCGGAGAAAG 100 62 ST40_RS15785 3462672 .. 3462682 + -5.4 -4.16943 GGAACGCATTGCGCG CATG GAC CATG TTTTCCAATGTCGCG 68 428 ST40_RS15795 3464014 .. 3464040 + -5.9 -5.13473 TCTTGGCAGCGTAAA CCGCCAGATCCGC CCG GTGGAT--GGCGG TTTTTTCGGTGTCCT 85 150 rplM NONE rpsI 3466430 .. 3466451 + -17.3 -5.46657 TACCAGTTCGAAAAA CCCGCCGGA GCGA TCCGGCGGG TTTTTTGTTGGCATC 100 58 ST40_RS15815 3468114 .. 3468126 + -3.4 -4.13648 ATGTCGCGAAGTGCT TCCA GCGTG TGGA TTTGTCTGTCGAGTT 59 191 ST40_RS15825 3469946 .. 3469965 + -10 -3.32844 GTCTTGCAGTGAAAG CGCTTCGGC GTT GCCG-AGCG TTATCCAGTGGAAAC 68 274 speB NONE ST40_RS15850 3474427 .. 3474440 + -6.7 -3.56325 GTTTGCTGCGCGCTG CCTTC CCGG GAAGG TTGTCGTTGTGCGGA 60 84 ST40_RS15860 3477784 .. 3477799 + -4.6 -3.55622 CCTCAAGGATCTTGA CCCGGT TCGC ACCTGG TTTGCGAGCCTTGAC 52 151 ST40_RS15870 3480139 .. 3480156 + -5.5 -4.72007 GCGGTCTAGGGTGCA AGCCTTG ATCG CAAGGCC TTTGTTTTCATGACG 76 140 ST40_RS15875 3481462 .. 3481475 + -3.8 -2.53641 TGATGCATCCGGCTT CGGA GGGCGG TCCG CTTACTGCTCCCTTG 42 86 ST40_RS15880 NONE ST40_RS15885 NONE glpX NONE recJ NONE ST40_RS15900 3487522 .. 3487532 + -2.4 -2.67958 ACAAGGGCTTGAAAC GCTC TGC GTGC TGCCTTTAAGTCTTG 38 89 ST40_RS15905 3488496 .. 3488514 + -6.6 -4.53303 ATTTGTAATAAAAAT GTGCGCGC ACC GAGTGCAC TTTTCTCTAGACGTC 78 55 ST40_RS15910 NONE ST40_RS15915 3490648 .. 3490660 + -3.3 -3.21934 GACGGATAACAAACA GCACA CAG TGCGC ATTTTCTGGACAAGC 45 67 ST40_RS15920 3491221 .. 3491236 + -3.9 -4.43911 CCAACTAAGAAATTT TGGCC AATGAG GGCCG TTTTGGTTGACCTTT 66 33 ST40_RS15925 3492799 .. 3492833 + -4.9 -3.86346 CCGCCGGGCTTTACT TCGTCATGGTCAAGC TGATT GCCTGACAAAGGCGA TTTCTAACCGGGTAG 58 0 ST40_RS15960 3501784 .. 3501822 + -8 -4.18018 GGGGACGCGCATGCT GCGTCTCTCCGGTCTGGC AAG GCAAGGCCGGAGAAGTCC TTTTGGATAGGCGGC 77 97 fghA 3502963 .. 3502998 + -5.5 -5.1101 AATTGTGCCGCCGCA GGAATTGGCGATCTTC ACTGC GACGATCGC-ATTTCC TTTTTTCGGTAATGG 85 297 ST40_RS15995 3510430 .. 3510467 + -20.5 -3.28712 ATAAGCTCTTGAACG TCGGCAGCCGCCGGAGG ATCT CCGCCGGCGGCTGCTGC TTATCAGGACGCAAG 100 37 ST40_RS16000 3511608 .. 3511640 + -4.8 -2.57881 CTGTCGCGGTGCTTA CGATGCCGATCTGGC TTGA GCC-GATTGGTGCCG GTTATCCCGACCTTC 44 97 ST40_RS16005 NONE ST40_RS16010 NONE ST40_RS16015 3514246 .. 3514266 + -18.3 -5.36441 ATTTCAGAAGCTGAA GGCCGGTGC CAA GCACCGGCC TTTTTTGTCTGCCGG 100 51 ST40_RS16020 NONE ST40_RS16025 3516863 .. 3516879 + -3.6 -3.04322 GCGGCGTGTTTCCAG CATGGG GGCGG CCCAGG TCTTCAGGAATTGCG 43 388 ST40_RS16035 3520376 .. 3520388 + -6.3 -4.3534 GGAACAGAACCGTCC CAGAT ATG ATCTG TTTTAATCGTTGAGG 71 7 ST40_RS16040 NONE ST40_RS16045 3522388 .. 3522399 + -4.4 -3.2756 CGCCGGCTGACACGC GAAG TCTC CTTC TATCTTGTTGCGCTT 49 31 ST40_RS16050 NONE ST40_RS16055 3525149 .. 3525166 + -6.9 -3.53091 ACTGGTCACGTTTCC GCGCTCC TGAC GAAGCGC TTTCAAACACAGCAT 60 16 ST40_RS16060 NONE ST40_RS16065 3527706 .. 3527735 + -20.1 -5.20534 CGGGCGGAATCGAAA CGCCGGACAGGTG GGAG TACCTGTCCGGCG TTTTTGTTGGTTGAT 100 71 tssI NONE ST40_RS16120 NONE tagH NONE tssK 3545982 .. 3545999 + -4.7 -2.62396 CAGCTTGAGTTCTAT GCCGTCC GGGA GGGCCGC TGATGTCGGACAATG 44 5 icmH NONE tssM 3551292 .. 3551302 + -2.4 -3.32844 TCGGCGATTTCAGTT GCCC TAC GAGC TTCTAGAATGGGAAC 45 9 tagF NONE ST40_RS16150 NONE ST40_RS16155 NONE ST40_RS16160 NONE ST40_RS16165 3557372 .. 3557382 + -5.4 -4.10453 CCGACAAGGACCTGT CCTT CAA AAGG TTTTGCGCAGCTTTG 65 481 ST40_RS16185 3559208 .. 3559244 + -15.9 -3.64103 CCCCATCTGTGGCTA CAAAAACGGCCCGGTTT TCA AGACCGGGCCGTTCTGG TTTGACATGTGACTA 100 91 ST40_RS16195 3562235 .. 3562249 + -4.2 -3.35597 AGTTGGCACGCCCAA CGGG ACTCGAA CCCG TGTTTCCGCCGTGAA 51 92 ST40_RS16210 NONE ST40_RS16215 3564448 .. 3564466 + -11.7 -5.38054 TCTGCACATTGACTT GGCCGGA CATGT TCCGGCC TTTTTGTTTGTCGAC 100 57 ST40_RS16220 3565171 .. 3565181 + -6.8 -3.14132 GACCGACAGGACCAA CAGG ACG CCTG TTGGTGCAGACACGG 54 125 ST40_RS16230 NONE ST40_RS16235 3567310 .. 3567322 + -3.3 -3.28712 GATCGGAGGGGGAGC GTTGC CGG GCATC TTGTCCGAGCAAAGG 47 318 ST40_RS16250 3568561 .. 3568571 + -2.4 -4.59853 CCGATTTCGAATCGA CACG AGC CGGG TTTTTGACGCATTAG 65 101 ST40_RS16255 3568931 .. 3568962 + -10.1 -3.51934 TGCAAAAAACAAAAA CCGCCG-GCCCCTG CAATA TAGGAGCACGGCGG TGTTTCTAGACCGCG 71 158 ST40_RS16265 3571639 .. 3571661 + -5.5 -3.41936 TTTCGTCGATCGCTG CCCTGGCGA TGAGT TTGCCAAGG TCTTTGACGTTGCTC 55 244 ST40_RS16280 3573842 .. 3573862 + -12.5 -5.08169 CTGGAAGAAGCCTTT TGGCGGAGC TTG GCTCCGCCC TTTTTTCAGGTGTCT 100 139 ST40_RS16295 NONE ST40_RS16300 NONE ST40_RS16305 3578916 .. 3578926 + -2.4 -2.77899 AAATTCCGGATGTTC GGCC ACT GACC TGATTAATGCCCCAA 39 12 ST40_RS16310 3579420 .. 3579433 + -2.3 -3.55622 TGTGGAGGCGAACCG ACTGG CGAT CCAGG TTTACCGGGGTTGCC 47 137 ST40_RS16320 3582026 .. 3582064 + -11.2 -2.52543 TTCTTTGATTGAGGA TTGAAGGGGTTCCGGCGG TTGTT CTGCCGGAACC-C-TCAA TAAATTCCACGCAAT 68 46 ST40_RS16325 NONE ST40_RS16330 NONE ST40_RS16335 NONE ST40_RS16340 3586555 .. 3586570 + -4.6 -5.05601 ATGATGGCCTTGAGC CGGGGT TTCA GCCCTG TTTTTGTCTGTCCTG 83 375 ST40_RS16350 3587788 .. 3587798 + -2.4 -5.06414 CCCATCGGAAAGAAT CGGG TGT CGCG TTTTTATTGCCCAAA 74 110 ST40_RS16355 3589301 .. 3589321 + -3.2 -3.88498 TGAAACCTTGAAGAC TGGCACCT GATCA AGGCGCTA TTTGATCTCTCAAGC 54 16 ST40_RS16380 3593491 .. 3593506 + -6.8 -2.70932 CCCGGTGAATAGGTT GCCTCT TCAC GGAGGC TGCTTCCAGCGCAAG 50 393 ST40_RS16400 3597561 .. 3597604 + -4.4 -2.52464 GCTAAAATTCAATCC GACACCCGGTCTGTTTGCGT AAAG AGGCAAACGAACCGGGAGAA TGAATTGCCCAAGAC 43 36 ST40_RS16405 3598406 .. 3598422 + -15.1 -3.66541 TTGGAACAAGAAAAA GGCCGGG TGA CCCGGCC TTTGAAGTGTGTCTT 95 16 ST40_RS16455 3609671 .. 3609706 + -3 -3.04715 TATTTGCCCAATCCT CTCGGAGCCGCGTCCT GATC ATGACGAAGCCCCGCG CTTTTACGGCAGCTC 43 8 ST40_RS16460 NONE ST40_RS16465 3612261 .. 3612302 + -17.3 -3.65353 CGAGACGGTCGCCGC CCGTGGGCAAGTCGTCTAG TCCT CCAGACGGCTTGCCCGCCG TTTCCCGTAATTTCA 100 7 ST40_RS16510 NONE ST40_RS16515 NONE nagA 3623744 .. 3623756 + -4.8 -4.62471 CGCGTTTGCCGGTTA GGTC TTGTC GACC TTTTTCAGCGTTGAG 71 95 cobU NONE cobW NONE cobN NONE cobO NONE ST40_RS16555 3632117 .. 3632131 + -4.2 -3.13164 TGGCGCAGCACCATT CGGCAA AGA TTGACG TTGCATGGTTGAGAC 47 13 ST40_RS16560 3634045 .. 3634060 + -4.6 -3.30243 GCCGATCATGCTGTC GGCAGT GTTC ACCGCC TTGTAGACGATCAAT 49 444 ST40_RS16575 3636436 .. 3636449 + -2.3 -3.90112 TTCCTCGATCATGTC CGGAA AGGC TGCCG TTTCGTTGCGGCCGA 54 277 ST40_RS16595 3639015 .. 3639033 + -5.9 -4.98531 CCGGACTGACAGAAA TCCGCCG AATGA TGGCGGG TTTTTGCTTTAAAAG 84 55 ST40_RS16600 3640617 .. 3640646 + -14.3 -4.90079 ATATTCTTCACGATG GCGGCTGACGGTC GAAA GATCTTCAGCCGC TTTTGTTATTCGGCT 100 55 ST40_RS16605 3641640 .. 3641667 + -14.2 -2.75997 GTCCGAAGATTTCAG TCAGGGGGTGTC AGAT GGCATCCCCTGA ATTCGTTTCTGGCAA 83 50 ST40_RS16615 3645190 .. 3645202 + -4.7 -4.45168 CTAGATCATTTCTCG GCCCG GAA CGAGC TTTGTCTTTTCCGGG 68 37 ST40_RS16620 3645845 .. 3645857 + -2.6 -3.79071 CAGGGGTAGGCAGAA GTCG GAAAA CGGC TTTGGGTCTTATCGC 52 32 ST40_RS16640 3649502 .. 3649516 + -7.1 -3.05384 AGGAAATAACAAAAG CAGGC ACGAG GCCTG TTGAATGGAGGCAAG 54 97 sufB NONE sufC NONE ST40_RS16655 NONE ST40_RS16660 NONE ST40_RS16665 3654841 .. 3654852 + -4.4 -2.76046 TCTGACGAAGCGAAG GTTG CGCT CAAC TGGTATTGAGCTTCA 45 5 sufA 3655306 .. 3655318 + -3.3 -3.12083 CCTGAATGCCCTGGC ACGCT GAT AGCGC CTTTCTATCTATTCG 43 19 tenA 3655986 .. 3656029 + -9.9 -3.92746 TGACTTCTGGCAGAT GGGGCTGAATGCA-AAAGACTG AGA CAGTTTTTCTGC-T-CAGCCCC TGTTTTTCCGATGAA 80 4 ST40_RS16700 3663453 .. 3663465 + -3.3 -4.28188 GAGCGTGCCAAGGCT GCAGA ATA TCAGC TTTATCTTATGAGTG 62 143 ST40_RS16715 3666574 .. 3666616 + -8.4 -4.32857 AGAGGCGACTTTACA G-CCCCGTG-GCGCCGAAGG CTTTT CCTTCGCAGCGCGCGGGGGC TTTGTGTTTGAAAAC 81 45 argS 3668906 .. 3668927 + -2.9 -4.29326 CCGGTTCAAACAGCC CCTGTGACG CCCT CTTCACACG TTTCTTCGCTTTGGC 62 510 ST40_RS16725 3671061 .. 3671080 + -12.8 -4.81814 AAAGCGTAAGTGAGA CGGTCGGG TATT CCCGGCCG TTTTATTCTGCTGCT 100 60 ST40_RS16735 3673175 .. 3673188 + -3.1 -3.83026 TAGACGTGGTCAACG CTG-GC TTC GCTCAG TTTCCTGTGCAGGCG 54 144 nagZ NONE ST40_RS16750 NONE scpB NONE ST40_RS16760 3677998 .. 3678008 + -2.4 -4.08692 CGTTTTTGTAAGAAG GGCC TAA GGGC TTTTAAAGCCGATTA 56 111 ST40_RS16765 NONE tatB NONE tatC NONE serS 3680976 .. 3681005 + -12.2 -3.33419 GAATTTTGATTGCAA TGGACGGCAACC GCGCAA GTTTGCCGTCCA TCTTCATTTGGGGCT 80 119 surE NONE ST40_RS16790 3682546 .. 3682560 + -4.2 -2.77013 CAAGAAGCTCTAGAA CGGTGT TTC ATGCCG ATTCTTGGGCCCATG 45 28 ST40_RS16795 3684292 .. 3684311 + -12.1 -4.13654 GAATCTTGTCAATCA GCCCGGC CCTTGC GCCGGGC TTTGTCATTTCAGGA 91 116 yajC 3685800 .. 3685825 + -14.7 -2.65279 CGCTTCGATGATACC GCCGGGCCGGT TCAG ATCGGCCTGGC TGCATTTAAGGCTTG 83 53 secD NONE secF NONE ST40_RS16820 NONE ST40_RS16825 3690005 .. 3690025 + -4.6 -3.17941 ATTCATCGGCTGGAA GGAGCCCGG TTTG CCGG-CACC TTCGTCCCGTGTGAT 48 344 ST40_RS16850 3697003 .. 3697031 + -8.1 -3.14132 TACCGGGTGCGGTCC CATGCTTTGGGGC CGC GCACCAGGGTATG TTGATCAACCGCCGA 60 54 ST40_RS16860 3699957 .. 3699983 + -15.1 -5.28942 AGCAGAACAACAAAA GCCGCCGAAGG GGTGA CCTCCGGCGGC TTTTTGTTTGCCCTC 100 49 ST40_RS16870 3702303 .. 3702320 + -2.7 -2.87564 TTTGGAAATTCAACA TGACG AAAGGAGG CGTCA TGTATGCCCAGATGG 42 138 paaA NONE ST40_RS16880 NONE paaB NONE paaC NONE paaJ 3705380 .. 3705407 + -6.4 -3.33696 GAGCCATTCGATTAC TTCAAGTGCCACT GAG AG-GGCACTTCAA TTAGTTGGGACGCGC 56 11 paaK 3706602 .. 3706621 + -2.2 -3.12847 CGACGCCTGAGACCA TTCC-GTTT CAA GAACTGGAA TTCAATATGACCGTT 42 31 paaZ 3708702 .. 3708721 + -13.6 -5.27335 TATCCAAATGAAAAA GGCCACCT GATC AGGTGGCC TTTTTCTTTGGCGAA 100 51 ST40_RS16925 3713018 .. 3713051 + -18.9 -2.53581 TCGCTGGCAGATAAA TGAAATGCCCCGCCG TTTC CGGCGGGGCTTTTCG TCAGTTACCGCTGTC 100 77 ST40_RS16935 NONE ST40_RS16940 3727423 .. 3727445 + -11.9 -4.60258 CGAAGATACCAAAAA GCCCGCCGG TTGCT CCGACGGGC TTTGTTATTTGGTGG 100 54 doeA NONE argE 3735605 .. 3735638 + -3.9 -2.752 GGAACGGTTTCAGAT CATGTA-TTCCGTTCT GAG AGATCGGATCTGCATG CTTGTCTATCCGCCT 43 105 ST40_RS16980 3736534 .. 3736551 + -4.9 -4.77757 CTTGCAATCGGATTC TACGTTT CGCT GAACGTA TTTTCCTTTTTCGAG 78 309 ST40_RS16990 NONE ST40_RS16995 NONE ST40_RS17000 3740721 .. 3740739 + -3 -3.02144 GATACTGCTGACGAC GGAAGTGC TGA GCACTGCA TGTTGAAACCCGTCG 43 1 ST40_RS17005 NONE ST40_RS17010 3742745 .. 3742756 + -4.4 -3.12668 ATGTAAACCGACACG GACA CGTA TGTC TTCAGTATCAGGCTA 47 55 ST40_RS17020 NONE ST40_RS17025 3745616 .. 3745646 + -10.4 -5.05113 TTGCCTAGAGATACA GGGGG-AACGCCC CATAGC GGGCGTCACCCCC TTTTCTTTCTGTCAC 100 70 guaB NONE ST40_RS17035 3748677 .. 3748692 + -4.6 -3.07895 CAGCCCGAGAACGTT CGGCAA TTGA TCGCCG TCTGTTGCGAGTAAC 46 81 guaA 3751805 .. 3751823 + -5.3 -3.18292 TGTCGAGCCTGCATG CATTGGC GAAAG GTCAATG ATTTTGCTCGTGCAT 52 151 ST40_RS17050 3752857 .. 3752873 + -2.2 -3.87979 AGACTGTGCTTCTTG TGCAGC CCTTT GCTGTG TTGTCTTTGCATTTG 52 187 ST40_RS17065 3755285 .. 3755304 + -3.5 -4.56775 AAACGGGACAGCCAC CTTCAGC AGGCAG GCTGACG TTTTTCCAGGCAGAT 69 8 ST40_RS17070 3756144 .. 3756158 + -4.9 -3.92659 GCGCTTCCGACTCCA TCGCC TTTTC GGCGG TTTCGGTTTTACGCG 59 361 gyrA 3759521 .. 3759549 + -12.5 -3.66178 ACCTGAAAACGACAA CAGCGGC-CAGG GTGGAA CCTGAGCCGCTG TTTGCCGTTACGGGG 86 56 coaD 3760651 .. 3760670 + -7.1 -2.70932 CCGAACCATTGAGAT CGCGCGCG AAACC CG-GCGCG TAATTCAAAGCCAAG 52 3 ST40_RS17095 NONE ST40_RS17100 3761798 .. 3761822 + -15.8 -5.11836 GTGGCTTTAACGATG CAGCGCGGAT CAGTC ATCCGCGCTG TTTTGTTTTGGATGT 100 52 queA NONE tgt 3764244 .. 3764260 + -5.1 -3.74693 GCTGAAACTGACTAG GCGGA AAATCCG TCCGC TTTCGTCAGATAGCA 58 66 kdsA 3768421 .. 3768439 + -11.7 -4.05788 GAATAGTCAATTTCA GCCGCAC CTCGT GTGCGGC TTTCCTTTGAGGGGC 90 35 eno 3769848 .. 3769881 + -18.3 -3.54424 TCAGGTCGTCAAAAT CAGAAAGGCCCCGCA TTCG TGCGGGGCTTTTTTG TTTCGGCAACTCAAG 100 46 ST40_RS17160 3776324 .. 3776348 + -15.8 -5.56264 GCCAGAAATGAAGAA GGCCGGAACT GTGAA AGTTCCGGCC TTTTTTGTATTTGAA 100 52 ST40_RS17180 NONE ST40_RS17185 NONE ST40_RS17195 3783074 .. 3783084 + -2.4 -3.02144 ATAAAGTGAGGGAAC CCCG TGG CGGA TATTACACCAGGTAA 42 203 ST40_RS17200 3783825 .. 3783850 + -9.7 -3.30635 AAAATACAGTTTTGG CACTGGCGC GAACCAAG GCGCCGGTG TTGTGCCGCGCTTTC 68 57 ST40_RS17205 3784988 .. 3785009 + -4.4 -2.84602 CCACCGGCACTACGG TCCTGATC CCCTAA GAGCAGGA ATTTCATGCGGTCCG 45 12 ST40_RS17210 3785974 .. 3785991 + -2.6 -3.9642 CAAATAGGCAACATT GCGGTC TCAAAT GAGCGC TTTGGTTCCATGTTT 54 34 xdhA NONE xdhB NONE xdhC NONE ST40_RS17230 NONE ST40_RS17235 3793793 .. 3793810 + -5.5 -3.56099 GCCGGCGTGGTTCGG CAGGGGA GGTC TCCCATG TTTGAAGCCGTTCTC 55 3 ST40_RS17240 NONE ST40_RS17245 3795909 .. 3795935 + -15.8 -4.35116 ATCACCTATCCAGGA CGGCCCGGAGCC AGC GTTTCCGGGCCG TTTTCATATCCGGTG 100 49 ST40_RS17250 3797136 .. 3797149 + -2.3 -3.96148 CTCGAATATCTTTTT CAGCG CTCC CGCTC TTTCTGGTGACCAGC 54 84 ST40_RS17260 3801167 .. 3801204 + -17.8 -3.53012 TCCAAAAGCACTCTT GCGGGGCTCTGATACC TCGGTT GGTATCAAGGCCCCGC TTTAACGAGAGAGAC 100 14 ST40_RS17345 3818186 .. 3818230 + -6.4 -5.69473 TTCTGTATCCGAATT TTTGAAAGCGTCTCGTCGCCT TGTA GGGCGA-GGGGCGCTTTCTGC TTTTTTTGTCGTCTC 100 129 ST40_RS17350 NONE tmk NONE ST40_RS17360 3821247 .. 3821261 + -3.5 -3.83318 GCGAGAGTTCGTGAC TTGGG CAAGC CCCGA TTCTCTTGTTAAAAG 56 88 ST40_RS17365 NONE ST40_RS17370 NONE ST40_RS17375 3823753 .. 3823763 + -3.2 -3.78409 ACGTCATTGCAGATA GCTT GCA GAGC TTTGGCTTGCGTTCC 54 293 ST40_RS17385 3825608 .. 3825618 + -6.8 -4.57516 CAATATCGCGCTATC GCTG ATG CAGC TTTTGATTTGAATAT 78 215 ST40_RS17390 3826859 .. 3826878 + -2.8 -4.62069 AATGGAGAGTGAACT GGCTCGGAA CAT TTCCG-GCA TTTTTCAGATGAAGC 68 152 ST40_RS17410 NONE ST40_RS17415 NONE ST40_RS17420 NONE hydA 3835494 .. 3835504 + -8.2 -2.79796 ACGCACCGGCATTCC CGCC AGC GGCG TCTAATCCAATCCGG 57 10 ST40_RS17430 NONE ST40_RS17435 NONE ST40_RS17440 3838628 .. 3838685 + -2.3 -2.62792 AGGGGGTGATTTGAG TCT--CCACTTGTCATCCCGGAT-ATGCC AAAA GGCATCATCCGG-ATGACAAGCAGACAGG ATGTTTCCACTCCAT 38 32 mazG 3839534 .. 3839545 + -2.2 -4.04206 AGTTCACCCTGCTCG GCTCG TTC CG-GC TTTCTATCAGACTAG 54 39 ST40_RS17495 NONE ST40_RS17500 3853456 .. 3853472 + -4.3 -3.49419 TTTATGATTAAACCA GCGACCA TTC TGGCTGC ATTTTTGTGCGCAGG 52 142 ST40_RS17505 NONE ST40_RS17510 NONE ST40_RS17515 3855495 .. 3855536 + -13.1 -3.9712 GGGATACCGCTCTAC GTCGGCAACAAGGCGGA ACATCTCG TCCGCCTTGTGGTTGAC TTTGTGGTCGGATGA 86 428 ST40_RS17570 3864582 .. 3864609 + -6.9 -2.7317 TTTCAGTGCGATTTT GGGC-TGGCCCC TGCTC GGGTCCGCGCCC TCGTTCCACATGTAT 52 199 recG 3871105 .. 3871131 + -4.3 -3.50853 GGGTTCGGCGTAGTC GGCAGGAACAC GGAAA GTGTATCGGCC TTGTCCTTGAGCCGG 52 329 ST40_RS17595 3872476 .. 3872489 + -2.3 -4.29738 CCCCGCGCAGAAGCA CGAAG AAGG CTCCG TTTTCGTCGGTCTGC 63 316 ST40_RS17615 3877427 .. 3877451 + -12.9 -2.64472 GTCGGTCGATGCAAA GCGCCAAGG CGAAGAA CCTTGGCGC TGCGTTTACCCGATG 75 66 ST40_RS17635 3880715 .. 3880746 + -5.8 -5.0925 GAAAATTTTCTCACG TCAGGACGCAACAG GCTC CTGTTCCGTCTGGG TTTTTCCTTTTCCGC 84 264 ST40_RS17670 3891328 .. 3891340 + -4.8 -3.57462 ATGATCGGGCTGGAC CGGA ATTGA TCCG TTTGAAAGTGGAATG 52 17 trpD NONE trpC 3893172 .. 3893185 + -2.3 -3.53444 CCTGGCCCGTCCAGC CCTCT CCGA AGCGG TTTAGGCGGACATGG 47 7 moaC NONE ST40_RS17690 3894997 .. 3895017 + -18.3 -4.10566 CCCGAGAAAACAAAT CCCGGCCGA GTG TCGGCCGGG TTCTTATTCTTAAAT 100 108 motA NONE ST40_RS17755 NONE ST40_RS17760 NONE fliN 3912211 .. 3912238 + -4.8 -3.39668 CCGGCGGTATGGATA TCTGAGGTCGAA TTTC TCCGGCCTCACA TTCTCCGGTTTGCCC 51 21 ST40_RS17770 3913326 .. 3913354 + -5.2 -3.54459 CTGAATCCGAAGCAG GACGAAGGCGCA TTCTT TGCGTAATCGTC TTTGCAAGCGGTTCG 55 2 flhB NONE ST40_RS17780 3915116 .. 3915126 + -2.4 -3.03159 CTGTTGGGCCTGCCG CGCG TTT CGGG TCTTCCAGACCTTGA 42 194 ST40_RS17785 3915676 .. 3915689 + -5.3 -3.14229 TGAGCCACTACTGCT CGATA CCGT TATCG TGTTCATGGGCCTAT 50 267 ST40_RS17945 NONE ST40_RS17950 3942230 .. 3942240 + -4 -2.71712 CTAGGTCCCGAGTAA TTGT CCT ACAA ATTTCAAAGCAGCGA 43 37 ST40_RS17955 3943196 .. 3943222 + -3.7 -2.70932 CATGGCGGACAAGCT GGTCGCTTC GACCCTCCA GGAGTGACC TGGTTGCCGGCAAAC 43 1 ST40_RS17960 3944718 .. 3944766 + -14.8 -2.63596 AAGACACGCCTGCTT CAAGGTCAGATCATGCTCGAACGC ATG GTGTGCG-GCATGA-CTGGCCTTG TCATATCCGATCACC 76 175 ST40_RS17975 3948582 .. 3948597 + -2.4 -2.88579 GGCCTGTTGTGAGAC GGCCCG CCCC CAGGTC TCTGTCCGACATTCG 40 29 ST40_RS17980 3949538 .. 3949554 + -5.1 -3.6053 TGCAGAACACAATGA GAACAGG TAC CATGTTC TTGATTTGTACCAGA 55 89 lexA 3950308 .. 3950365 + -2.6 -3.00774 TTCGTCAGTATTGAC CAGTC-AC-TC-CTCTGCGCGCGCTTCGG CCG CCGAGGCGCGCTCGGCTAGACGCAGGCTG TCTCTCGTTACCGTA 40 27 gltX 3954327 .. 3954362 + -6.9 -3.48395 CAAGCTTCCGGCAGT CGCTTTGGTTGGCGA AATCCG TCTTTGACCAAAGCG TTATATCGGCCAGCT 60 77 gltA 3955868 .. 3955899 + -18.1 -4.87892 ATGCATATCAAAACG GAAGACGCTCGGC TTTATT GCCGGGCGTCTTC TTTATTTTGTTACCC 100 89 ST40_RS18005 3958702 .. 3958722 + -10.3 -5.42975 CGAGACTTGGAAAAA CCGGGGGCG AAC TGCACCCGG TTTTTGTTTGTCTGG 100 60 ST40_RS18010 NONE ST40_RS18015 NONE ST40_RS18020 3960384 .. 3960400 + -7.9 -3.40522 CGGCCACAGTATTAT CCAGCTC CTG GAGCAGG TTCTGATCACCCGAT 61 278 ST40_RS18025 3961493 .. 3961520 + -9 -3.53012 CTCAAGTGAAACAGT GCCGGACGCGGC CAAG GCTGCGTGCGCC TTTCGGAAGGCCGCC 66 363 ST40_RS18100 3976458 .. 3976469 + -4.4 -3.16914 CGAACAATCTTGTCA GATC CAGA GATC GTTTTCCTGGGTCCT 49 96 ST40_RS18110 3978872 .. 3978888 + -2.2 -3.85698 CCGGCAGCGATCTCG CTTGTG GTCAG CGCAGG TTTCTGCCGAGCCCA 54 505 ST40_RS18140 3986952 .. 3986984 + -3.4 -3.39529 TGGCCCGTAGCATCG GACAGGCGAACG-AT ACCC ATGCGATTGCCGGTC TTGGTCTTGCGTTCC 47 504 ST40_RS18285 4018656 .. 4018668 + -10.5 -3.28791 GAGCATGTCGGTGAG CCCGC GCT GCGGG TTGTCCGCGGCAAGT 68 67 ST40_RS18345 NONE glnA 4034252 .. 4034283 + -18.8 -4.07568 ACGGGTTCAAACATG CGGAAAGGCCGGGC ATTT GCCCGGCCTTTTTG TTTTCCGAGCAACCC 100 46 ST40_RS18365 4036237 .. 4036258 + -2.1 -4.07568 GGCAACTAACCAGCG GCAGAGCGC TGCA GCGTCCTGA TTTTCCGGCAGGCGC 56 32 tyrS 4037635 .. 4037651 + -15.1 -5.4505 CAGAACTGATAAAAA GCCGGGC ACC GCCCGGC TTTTTTGTTGGGCAA 100 53 bcp NONE ST40_RS18385 4042974 .. 4042986 + -3.4 -3.21276 GGGAAACCGTCGAGA TCCA GGTAA TGGA TGTTCTGCGCCGGCA 45 438 ST40_RS18390 4044032 .. 4044049 + -14.1 -3.12613 GCGGAAACAAAAAAA CGGGGCC GAAT GGCCCCG CTTTCATTTGTATTT 91 53 ST40_RS18410 4052851 .. 4052868 + -9.8 -5.55769 CTTTGAAATGGAAAA GGCGGC CAGTGT GCCGCC TTTTTTGTTGTCCGA 100 59 ST40_RS18420 NONE ST40_RS18425 4056651 .. 4056683 + -7.8 -4.43012 CTTGCCTGTTGGAAA CCCCC-ATTCCTCAT GTCA GTGAGAAATCGGGGG TTTTCCTGTTCCAAT 79 73 accB NONE accC 4058778 .. 4058790 + -3.3 -3.02144 TCCTGGGACGAGTGC CGGGA GCA TCGCG TGTTCCAAGGAATGC 43 46 aat 4059920 .. 4059934 + -4.2 -4.56597 GCGATATAAAACAAT TCCGTC GGT GACTGA TTTTTGGCCCAGAAA 70 375 ST40_RS18460 4066812 .. 4066838 + -14.5 -4.98672 GCCCAGACGAAAGAA CCCGCCC-ATCG GAAA CGATCGGGCGGG TTTTGTGTTTTTCGG 100 154 ST40_RS18465 4068459 .. 4068474 + -5.4 -3.01712 GAACCGAATGCACCT TGTCGA CTTT TCGGCA TATTGCAAAAGGCCC 50 39 ST40_RS18470 NONE ST40_RS18480 4074025 .. 4074037 + -4.8 -3.53012 CCTGTTACCGCTTTC GCTG CCATT CAGC TTTGGAAAGCCAGAA 52 213 ST40_RS18485 4075112 .. 4075123 + -3 -4.17048 CCGCTCTCCCGCCAG GTTT ACCG AAAC TTCTTTTGGAGGAGA 58 396 ST40_RS18490 4075776 .. 4075786 + -4.6 -3.24365 TATCGTCGCCCGCCT GGCT GTG GGCC TCTTCTGAAATCTGA 48 163 ST40_RS18510 NONE ST40_RS18515 NONE ST40_RS18520 4085511 .. 4085524 + -9.5 -3.6682 CAATGACCGCCACCA CCGGC AGGT GCCGG TTTCGGTCGCTCCAC 74 84 ST40_RS18535 4089717 .. 4089730 + -3.7 -2.604 CCGACCTGACCGGGG CGGAC AGAC GGCCG TAACTTCCTATATTA 42 89 ST40_RS18540 4091274 .. 4091313 + -5.6 -3.12351 ACGTAAGACTAAACC GT-GCGCCCGACACAGTCG GCC CGATTGCGCCAGGTGCCAC TTCGCTCTCGAACGC 50 35 ST40_RS18545 4093540 .. 4093571 + -4.4 -4.36914 CCTACCCGGCCAGGC GCTCGACCAGAAAA TTCA TTTCCTGCTCCAGC TTTTCTCCGGACAGG 66 82 ST40_RS18555 NONE ST40_RS18560 4095234 .. 4095262 + -11 -2.74322 GATCCAGAAATAAAA CCGGGCGGAG TTTCTAACC CTCCGTCCGG GTTTCAAAGATTGAA 69 39 ST40_RS18565 4098958 .. 4098972 + -4.2 -2.74605 CCAACGCCAGACATT TCCGGA GCT TACGGA TGCGTTTTAAAAAAG 45 241 ST40_RS18570 NONE ST40_RS18575 4100844 .. 4100865 + -10.8 -3.75153 ATGTGAGCTGCATCA GGCCGGGG CCATCA CCTCGGCC TTTGCCTTCGCAACA 76 61 ST40_RS18585 4102745 .. 4102774 + -4.9 -3.85817 CGATTGATGGTCCTT TGATCAACCCTGA AGTG TCGGGGTGGCTCG TTTCTGAACACCGCT 58 145 ST40_RS18590 4103299 .. 4103328 + -12.1 -4.88736 GCACACAGCAGACAA CGCCCCGCCTGGCT TCA AACCGGGCGGG-CG TTTTTCTCGATGCTC 100 68 ST40_RS18635 4114348 .. 4114390 + -9.9 -3.1247 GCCCCTGATAGGTGC CTGCCAGCACGATCCCGGTC ATGT GACCGGAATCGTGATCG-AG TTCCATCTCCACCAT 64 408 ST40_RS18655 4117411 .. 4117430 + -3.5 -4.09685 TGAAGAGACTCGACG CTGTCCG CGCCGA CGCACAG TTTTACCAGATGCAA 59 430 ST40_RS18665 4118490 .. 4118500 + -2.4 -3.01791 TGAGCAGCTTAGCGC CCCG AGT CCGG TATTGGACAAAGACT 42 58 ST40_RS18670 4119192 .. 4119212 + -14 -4.78077 GCTAAAACGACAAAA GGCGCAGC CTCAC GCTGCGCC TTTGTTTTCCTTGCG 100 104 ST40_RS18675 4120862 .. 4120882 + -7.5 -2.56914 ACGCGTGAACCCACG GATGTCGGC GAA GCTGACAAC TGCCTTGATCCACTC 54 499 ST40_RS18690 NONE ST40_RS18695 4124495 .. 4124511 + -5.7 -4.07568 TCAAACCGTTGAAAA CGGCCGC TTT GGGGCTG TTTTCACCGCACCAA 67 235 ST40_RS18700 4125075 .. 4125092 + -14.1 -4.02132 TTCGGATAGAAAAAA CGCCGGC ATTT GCCGGCG TTTCTACGTTTGCAG 100 45 ST40_RS18785 4136813 .. 4136852 + -10 -5.08255 AGTAGCCATCAAACA GGCTCCGGGAGGT-TGCTG CAC CAGCACAAATCTCGGGGCC TTTTGTTTTGGCAAT 100 69 ST40_RS18795 4138292 .. 4138304 + -4.7 -3.42013 GACGCTTGAGGCGAT CGCCG GAT CGACG TTCATCTTGTCGAGT 52 150 lipB 4142998 .. 4143008 + -4 -5.63103 ACATTCAAAATCGCA TGAA GTT TTCA TTTTTTTAGTTCAAA 91 166 ST40_RS18835 4145096 .. 4145115 + -12.1 -5.5353 AAGGCATCTGGAAAA GGCGGGC CGCTGA GCCCGCC TTTTTTGTTGCTATA 100 50 ST40_RS18880 4154833 .. 4154849 + -2.9 -4.42386 TGATTGAAGGGCTTT TAACAGG ACA CCTGTAG TTTTGTCGGTGACAG 64 96 ST40_RS18885 4155402 .. 4155426 + -2.7 -3.46602 TGCTCGCAATCACAT TTGCGCGCCAG AAG TTGGTGCACAC TTCTCCTGTCACCAC 49 75 ST40_RS18890 4155989 .. 4156013 + -5 -3.53012 ACGGCATATCTGCCT GCT-TGGACCT GAGC AGGGCCAGAGC TTTGGACACACGCCG 52 187 ST40_RS18900 4159063 .. 4159081 + -8.8 -4.69027 AAAAAAAAATATTCA ACCTGAGG GAA CCTCAGGA TTTTTCGATGAATTT 93 352 ST40_RS18905 NONE ST40_RS18910 NONE ST40_RS18915 NONE ST40_RS18920 NONE mgtE 4165235 .. 4165253 + -4.4 -2.70932 GCTTTGCGGATCGTC CGCGCGGT AGC ACAGCGCA TCATTGCCGGCAAAC 43 458 ST40_RS18940 4168022 .. 4168049 + -12.8 -3.93057 GATATGCCTTCTAAA CATCCCGTTTTC AGTC GAGAGCGGGATG TTTCATCGTTTTGAG 93 64 ST40_RS18945 4168295 .. 4168311 + -4.3 -3.93288 GTCGGTGATCCTGGG TGCACTG TTT CAGGGCG TTTGATTACGTCCAC 60 4 ST40_RS18950 4168891 .. 4168903 + -5.5 -3.62046 TGGCAAAGCAGAGAA GTGCT ATC AGCGC TTGTTGAGCGCGTCG 58 46 ST40_RS19225 NONE ST40_RS19230 4216789 .. 4216799 + -5.4 -3.50264 GCAATGGATATGGAA CAGT CGC ACTG TCTTTCCCTCTTTTC 55 42 ST40_RS19235 4217651 .. 4217666 + -8.2 -3.01001 GGCGCGGATGAAAAT GGGGCT GTAA GGCCCC TCTCCTTTCACCATC 60 16 ST40_RS19245 4219794 .. 4219808 + -5.6 -4.51743 CTTGCCACTCCCCAC CAGGAC TTG GACCTG TTTCTTTCGTCGTGG 74 188 ST40_RS19290 4233532 .. 4233548 + -3.6 -4.09511 GCGGGTGCGGTGGCA GCGCTC CATTT GAGCGA TTTTGGCAAAATATT 60 94 ST40_RS19360 4246829 .. 4246858 + -17.2 -4.4261 GTAAGACGACACGTC TCCCGGCGGACC TTGAAC GGTTCGCCGGGA TTTTCGTATTCGGAC 100 37 ST40_RS19365 NONE ST40_RS19370 NONE ST40_RS19375 NONE ST40_RS19380 4252160 .. 4252195 + -11.2 -3.14344 CGTGAAGGGATTGAG CACGTTGTTTGTTGCG ACCG TGCAGCAAACGCCGTG TTCATGAAAGACATG 69 370 ST40_RS19405 4258428 .. 4258466 + -4.6 -4.15106 CGAACGGCGCGAACG TAAGGTTCCAGGGCATC AAGATA GATGCCCTGCC-CCTTG TTTTCGGGCTTGATC 65 50 ST40_RS19475 4276131 .. 4276142 + -2.2 -4.20516 GAAGACCACGCCGAA G-CCG CAC CGGTC TTTGTTCCATGAGCC 56 2 ST40_RS19480 NONE ST40_RS19485 4278443 .. 4278456 + -3.7 -3.15579 ATAGAAGCATTTCGA GCCGG TTTG CCCGC TTCATGACAAATTGA 45 5 ST40_RS19490 NONE ST40_RS19495 NONE ST40_RS19500 4282160 .. 4282173 + -2.3 -4.08692 AATGCGTCAGACTTT GCGGA AAAA TCAGC TTTTCACCGGGATTG 56 118 ST40_RS19505 4283024 .. 4283053 + -9.9 -3.1085 AGACAAATTTTCTCT GCACCAACGCCGG TTGC CCGGTTATGGTGC TATTCCCTGAATTCG 67 76 ST40_RS19510 4284010 .. 4284033 + -2.2 -3.53224 ATACTGCCAGCCACA GGCTCCGGCC GAAT GCCCGAAGGC TTTGCCACCGAGGTG 47 86 ST40_RS19515 4284661 .. 4284672 + -3 -3.08966 GTTTATGCCGCAACG TCAA AGAG TTGA TTGACTCAGGTTTCA 43 68 ST40_RS19520 4286485 .. 4286499 + -2.8 -3.99957 CCTGGCTTTAGCTGT TCGG CTGAAGT CCGA TTTATGAATGTTTGA 56 30 ST40_RS19525 4288363 .. 4288392 + -5.7 -3.70076 GGATATTGAGCTGTA ACTGGATTTAGCC ACAC GGTTAAAGCCAGA TTTAAGTACGTTTAA 60 15 ST40_RS19530 4290318 .. 4290343 + -11.1 -3.62597 GGACTGCGGCCTAAG CAGCGGCTGTC ACCT GAAGGCCGCTG TTCTTCACCAATAGC 79 54 ST40_RS19555 4295926 .. 4295944 + -3.8 -3.63627 ATCAACAACTGACCT G-CGCCG TGTTCC CGGCGAC TTTAAGATCTGACCG 53 29 ST40_RS19585 4303402 .. 4303446 + -15 -3.35775 TCCGGCCTTCGAAAG CGCGGCATCGC-GAAGCTGTT TGGC AACCGCTTCCGCGCCGCCGCG TGTTTCCCGGATCAT 86 68 folE 4306975 .. 4307003 + -10.4 -3.75665 GTCTTTGAGTTTTCA GCCCTTG-CGTTA TCAA TGACGACAAGGGC TTTCCTCCCATGTGC 76 33 hisI 4307489 .. 4307502 + -3.8 -3.29263 GCAGTAGAGCCACCA GCCT TGAGCT AGGC TTATCCGCAAGCTAT 47 46 napE NONE napF NONE ST40_RS19625 NONE napA NONE ST40_RS19635 4311593 .. 4311610 + -4.1 -3.14344 GAAATCCAAAGAGGG GGCCA AATGATGC TGGCC TTCCTCAAAAGGCTC 45 16 ST40_RS19640 4312273 .. 4312292 + -13.6 -4.8048 ACGTCGAAACAAAAA GGCTGGCT GACA AGCCAGCC TTTTTCATGTCAGGC 100 49 ST40_RS19655 4315053 .. 4315081 + -16.7 -2.6155 TGTTCACCTGCGAAA TCGGGCCGGCCGA GAA TCAGCTGGCCCGA ATTCATGTTCGGCAC 89 73 ST40_RS19660 4316055 .. 4316075 + -11.8 -4.61873 AGAACCCTTCAGACA GGCCCGGC TTTTT GCCGGGTC TTTTCGTTTCTGCGC 100 71 ST40_RS19665 4317148 .. 4317184 + -13.6 -3.04398 TACCACGACCGGATC CAGGGAACCGGCCCGC CCCCC GCAGGCCGGTTCCCGC CTTTTCAGGCCCAGC 84 109 ST40_RS19680 4319046 .. 4319068 + -12 -4.35926 CGGAGAAATGAAAAA GGCGGCTC ACCAGAG GAGCCGCC TTTTCACTTTACGAT 93 59 ST40_RS19695 4321464 .. 4321482 + -5.2 -2.65354 CCGGCAACCATGTGT CCGGCATC ACG GATATCGG TGAATTTCGAGTGAG 43 248 ST40_RS19710 4323522 .. 4323535 + -5.2 -3.14013 CAGACTGCACCTGGA CGCC TGTAGC GGCG TAATTTATTGGTCTG 50 9 ST40_RS19715 4324747 .. 4324761 + -4.2 -2.84878 TTATGGCTGGACTCC CGGG CAATAGA CCCG CTTTCGCTTGAGCCC 45 16 ST40_RS19720 4325554 .. 4325570 + -3 -2.62396 ATGTCGCGGAAGCTG TCGCCGA CCTG TCGG-GA TAATCTGAAGGACTA 40 6 gpt 4326168 .. 4326196 + -13.2 -4.70659 TGTAAATCGACAATC GACCGGTCAGAC ATGGC GTTTGGCCGGTC TTTTTGCGTCTGCCG 100 95 ST40_RS19730 4327010 .. 4327040 + -5.2 -3.78409 ACGGCACGCCGATTG TCGTGCGGCAGGCG TAA CAGCTGCCGCCCAA TTTGGCTTGACTTGG 61 9 ST40_RS19745 4332095 .. 4332105 + -6.8 -2.88544 TGGACGATTCGCCGG TCCG AGA CGGA TCTGTACCGCTCGAC 51 258 ST40_RS19755 NONE ngg NONE ST40_RS19765 4337298 .. 4337327 + -15.1 -2.87243 AAAAGCGACACCAAC TCACCCGCATTGC AATA GAAATGCGGGTGA TCCTTGTCGTCGTCC 79 156 phnC 4341502 .. 4341525 + -11.8 -3.02043 CGGGGCCTGACCTTC GCGA-AGCGGA TCA TCCGCTCTCGC TCTTGAAGCGGCCTT 76 31 phnD 4342484 .. 4342494 + -8.2 -2.74605 GGCTGAAGAAACAGC GCCG CGG CGGC TGACTTTTCAGAGCG 57 12 phnE NONE phnE 4344716 .. 4344742 + -2.8 -4.49389 GGGATGCCCGTTGAG GACGCCGACATG AAG TAGGTCGGCGCG TTTTCCTTCTGCGAT 66 301 map 4347339 .. 4347352 + -4.5 -3.53811 GACGGACTGATTTTC CGG-CC TGA GGTCCG TTTACCGGCGATGCA 52 31 radC 4348094 .. 4348108 + -4.2 -3.66803 CAAACGTCAGCTTCC GCAGCT TAC AGCTGA TTTGAGCTGTTCGAG 55 6 ST40_RS19830 NONE ST40_RS19845 NONE ST40_RS19850 4357358 .. 4357380 + -16.4 -2.91807 GAAAACAAAGAAAAA GCCGCCATTT CAA AAATGGCGGC GTTTCAATTTCGTCA 93 63 ST40_RS19860 NONE ST40_RS19865 4359643 .. 4359656 + -6.7 -3.2614 GCGAAGGACTCGGCC TCAGC GCGC GCTGA TTCCTGTCCCGCCTA 56 12 ST40_RS19880 4361577 .. 4361601 + -2.1 -2.53876 CCATCGCACTCATCC GG-GAGGCTG CAATGA CACCCTCTCC TGAGTTGCGATCGCG 38 65 ST40_RS19885 4362934 .. 4362977 + -10.4 -2.73619 CGGCATGAACAAAGA GACCCTGCCAGCTTCGTGTTG GGG CACTA-GAAGTTGACAGGGTC ATTTGAGAGGTCGTT 66 157 ST40_RS19890 4364304 .. 4364356 + -5.6 -3.62591 ATGACCGTCGGCAAA TGCGGAAAGTCTCGAC-GGACTTCGT CCG ACGGAGCCCAGTCGGG-CTTCACGTA TTTAGCCGTTATGAA 57 291 ST40_RS19900 4365566 .. 4365592 + -12.3 -3.18054 TTGTATTCCTGAGAA GCACGCGTGCCT GCAA GGGC-CGCGTGC TCTTGCATTATGGGG 78 56 ST40_RS19910 4367615 .. 4367629 + -3.4 -3.5393 TTCAATCGAGGACCG TCTGCC CAT GGCCGG TTTACGCAACCTGAT 49 73 ST40_RS19915 4368671 .. 4368682 + -2.2 -2.58861 TAAACTGGGCAGATT TTCC TGAA GGAG GTTCTGCCCATCATG 38 70 ST40_RS19920 4369287 .. 4369298 + -3.6 -3.21416 TCTGCGGATGAAATT GTCC GTGG GGGC TTCATGATACCGATC 47 99 ST40_RS19925 4371101 .. 4371114 + -4.5 -3.66803 TTGAGCAGTTTCTCA GGCAG AGGT TTGCC TTTCACGTATTGAAA 54 337 ST40_RS19935 4372221 .. 4372247 + -8.7 -3.05294 GTGACTGCATCCTGA TCGGCAGGGTT AGCTC AACCCTTCCGG TCTTCCGGCATTTCC 63 67 ST40_RS19945 NONE ST40_RS19950 NONE ST40_RS19955 4376778 .. 4376794 + -10.9 -3.13403 CCTTGCTTTCCTTTT CCTGGTT ATG AACCAGG TCTTCGTAGGAAAGC 69 412 ST40_RS19975 4381272 .. 4381305 + -9.6 -3.58726 GCTTCGGCTCATCCT GCAC-CAATGGCAGG TCAAT CCTGCCGTCGCGTGC TTCTATGTCCACCAG 68 125 ST40_RS19995 4385171 .. 4385215 + -15.8 -4.30987 TCAGCGGATTGTTCC GCTGCGCCGCAGATGGAAAG CTGCC CATTTCATCTGCGGCGTATC TTTATTCTCCCCCCT 100 146 ST40_RS20000 4385847 .. 4385866 + -13.6 -4.4648 TACAAAACAAAAAAA GAGCTGCC CATG GGCAGCTC TTTTGTACTCGACCT 100 132 ST40_RS20045 4394054 .. 4394067 + -3.1 -2.79831 TCCGCAGGTGACGAT TGACG AAAC CGTTA TCTGCTCCGGCTTGC 41 109 msrB 4394595 .. 4394630 + -16.2 -2.81312 AGAATAGACCGTTCA TCTGCCCGCCTCGG CTACAGCT TCGGGGCGGGCAGA TCTAATGCATGCATT 90 34 ST40_RS20055 4395926 .. 4395950 + -2.6 -3.74841 CATCAATTCGGATAA GGGCGCGCCG CTGTT CAGCACGCAC TTTGGGGTTATTTCT 52 450 ST40_RS20065 4396998 .. 4397030 + -15.6 -3.01089 GCTAAACGTCTGCTC CTGCACGAGGGCGG CCCCT CCGCCTTCGTGCAA TCATTTGAATTTGTG 93 46 ST40_RS20070 4398403 .. 4398418 + -7.6 -3.23216 AGAGGACGCCAGTTA CTTCAG GACG CTGAAG TTGCTGGTGATCAAC 59 64 ST40_RS20105 4405222 .. 4405261 + -15 -2.6342 TCGTCAGACCCGAGG ATTTTCCGGGCGTGCGGA GCAG TTCGCACGCCCGGGAACC TAAATTCCTTTCACA 83 45 ST40_RS20110 4406112 .. 4406129 + -2.6 -3.65426 GCGCATCGACAGGCA CGGTCT CGCGGC AGCCCG TTTCCCGATTTGTCA 49 332 ST40_RS20120 NONE ST40_RS20125 NONE ST40_RS20130 4407916 .. 4407933 + -11.3 -4.86731 AAAAGCGAAACTTGA CCACCTG CTCG CAGGTGG TTTTGTTTGAAAGCG 100 180 ST40_RS20155 4413106 .. 4413151 + -7 -3.28712 CATGAAGATATTGGC CGATGTCAGTTCAGCGACATTGC CCA GCA-TGTCGC-GAAC-GACCGCG TTGTCGAAGCCGCGC 56 324 ST40_RS20165 4414491 .. 4414503 + -3.3 -3.66556 TGCGCTTGACGCAGG AAGCC GCA GGCTG TTCTCTTCCGCGGTT 51 92 ST40_RS20170 4415204 .. 4415249 + -12.6 -4.44187 GGCTCGCCACACTCG GCTGAC-CTGACACCACTTCC CTTCA GGAAGTGGAGACAGCGCCAGC TTTGTGTTTCTCTAT 100 21 dctP 4416661 .. 4416688 + -24.2 -3.05844 GACGTCTCGGGAAAC GGACCCGCGCGG CCAG CCGCGCGGGTCC TGTTCAACTCAACAG 100 49 ST40_RS20180 NONE ST40_RS20185 4419453 .. 4419482 + -12.2 -3.09516 AAAGACAAAGGGAAA CGGCTGCGCT CAGTGGGAAA AGCGCAGCCG TTCCATGCTGCCGGA 76 51 ST40_RS20195 4421219 .. 4421235 + -2.9 -3.53012 TTCACGGCCAGTCGC GTTTGCG CGC CGGAAGC TTTCACAAGAACAAA 49 191 ST40_RS20200 4421705 .. 4421717 + -4.8 -4.17657 GACTGCCGCCATTTT GCTG GCAGG CAGC TTTTCCGATCTCCTG 65 109 ST40_RS20210 4422735 .. 4422762 + -2 -4.08216 ATGGCCCGCCGCCAG CGATG-ACACG CCAACCA CGTGAACATCG TTTTCGACCGCCTGG 57 284 ST40_RS20225 4427921 .. 4427938 + -12.7 -5.55769 CAGGGGCTAACAACA GGCGCAC TTCG GTGCGCC TTTTTTGTTCTGGCG 100 66 ST40_RS20240 NONE ST40_RS20245 NONE ST40_RS20250 4433709 .. 4433729 + -10.3 -4.56607 CGCCTGATGGATCGG CGGCCGGCG CTT TGCGGGCCG TTTTCTGCTTCCTGA 95 34 ST40_RS20255 4435249 .. 4435276 + -22.8 -3.05384 ACTGACCTTGAAGAT GACACGCGGGCC CACG GGCCCGCGTGTC TTGGATCGAACACGA 100 36 ST40_RS20260 4435947 .. 4436002 + -9.9 -2.54325 CTGAAACGCAAGCCT TGATG-CCCCTGCGG-CAGTTGCCTGCA ACT TTCGGG-AACTGTCCACAGGGGGCATCG CTCTCTTTGCAAACA 63 49 ST40_RS20265 4436954 .. 4436966 + -9.1 -3.63922 TTGCGCCACACGTTG CGCTG CTT CAGCG TCTTTTCAGCCACAT 68 301 meaB NONE ST40_RS20280 4440123 .. 4440134 + -5.8 -4.08064 TCGTCCTGAAGCGCG CGGT AAAA ACCG TTTTCCAGACGCCTT 65 429 ST40_RS20290 4441254 .. 4441286 + -10.4 -5.40474 CTGTAGACCGGTTAC CTGACCGGCCAGGC CATCT GCCTGGCCGGGCTC TTTTTTTCCGCCGGT 100 67 ST40_RS20295 4443166 .. 4443176 + -3.2 -2.76046 CATTCACACGGATGA CGTT GGC AGCG TAGTCTTCCCCTTCC 41 409 ST40_RS20305 4444372 .. 4444394 + -7.6 -2.92792 ATGAAGCCTGAGAGT GCGCCGGCTT GTT AAGGCAGCGC TGCTTTCAACTCGGT 56 130 ST40_RS20320 4448930 .. 4448945 + -4.6 -3.62096 CAGCCCCGCGCACAT GCCCTG CCCG CAGGGA TTTAAGATCCTCCAG 54 366 ST40_RS20340 NONE ST40_RS20345 4453041 .. 4453067 + -20.2 -5.03994 AGCGCGAAAAACCAA GACCCGCACGGT TTC GCCGTGCGGGTC TTTTTGTATCTGAAA 100 55 ST40_RS20350 4455014 .. 4455031 + -3.4 -3.75665 CACCGAGCCGATCAT CCGTTGC AATCC GCA-CGG TTTCATCCGGTCTCC 51 41 ST40_RS20355 4456961 .. 4456986 + -11.1 -3.17194 TACCACACGAGGAAG CGGCCAGCGCT ACCC AGCACTGGCTG TTCGGTTCAGAGGAT 74 45 ST40_RS20375 4461733 .. 4461743 + -6.8 -3.05384 CGTGCCGCATCAGGC GGTC TCC GACC TTCAGTCCCCGGCAA 52 404 ST40_RS20390 4464358 .. 4464369 + -2.2 -3.6502 ACCGCACAGGAAATA TTGC GTCT GCAG TTTGGGTGACAAGTC 49 153 ST40_RS20405 4467798 .. 4467811 + -3.7 -3.53444 GATGCCAAGCCCCAT GCCGG TGCC CCCGC TTTGCCGCCGGGTGG 49 141 ST40_RS20445 4477854 .. 4477867 + -5.2 -3.22521 ATAAGCGGGTTCTCA CCGG CACCGA CCGG TTGCCTTGCTGTCCG 52 105 ST40_RS20450 4478312 .. 4478340 + -14.6 -3.18735 GCTATCTGGTAGCCA GCTGGTGGGCGG CGAAT TCGCCCATCAGC TTCATGAAGTCTTCC 95 53 ST40_RS20475 NONE ST40_RS20480 4484655 .. 4484681 + -4.5 -3.73775 AGGGCTGGCGCAAGG TG-CCATGGCTGT AGC GC-GCCATGGTCA TTTGCTCCGGATCCG 57 385 ST40_RS20510 4488919 .. 4488957 + -24 -3.63266 ATTCATTGGAGAAAA TAAATGGCCTCCCGCGTG CGA CACGCGGGAGGCCATCTG TTTCCAGTCGGTTTT 100 477 ST40_RS20575 4504413 .. 4504432 + -10.6 -5.63374 AAAGACATAAAAAAA CCGGCACC CTGC GGCGCCGG TTTTTTTGCTGTTCC 100 95 ST40_RS20585 4508993 .. 4509003 + -2.4 -4.11216 TATCCGTCGGTGTCA GGGC GAA GCCG TTTTCAACATCCACA 57 412 ST40_RS20595 NONE ST40_RS20600 4511846 .. 4511856 + -2.4 -3.07344 TCTAAACCGATTGAG GCCG GCT CGGG TATCTTGCCCAGTCG 42 44 rpe 4512743 .. 4512753 + -8.2 -3.15544 CCATCCTTCGAGACA GGCC TTT GGCC TTCCTCAGGATGAGG 60 148 ST40_RS20615 4515156 .. 4515166 + -8.2 -3.54424 TAGCTGAAACGGCGG CCCG GCA CGGG TTTCCCCGCCTGCCC 65 60 purB 4517248 .. 4517277 + -3.5 -4.02719 GGAAGATAAAACGAA GGCA-GCGAGGACC GGA GGTATTCGCCTCCC TTTCCTCTTTGGTCG 58 164 ST40_RS20630 NONE ST40_RS20635 NONE ST40_RS20640 4519179 .. 4519193 + -10 -4.20367 GCTGAGATCCGAAGG CCGGTA GCT TACCGG TTGTTTCTTCCAGCC 83 136 ST40_RS20645 4520143 .. 4520165 + -12.2 -4.05714 ACAGCGGCAACAGTG GTTGATTATG AGA CATAATCAAC TTTGTCGTTGAAGCT 90 306 ST40_RS20665 4522779 .. 4522818 + -13 -4.49716 ACCAAAGGTATTGCA AACTATGACGCCCCCTTGT TCA ACGAGGGGGCGTTAT-GTC TTTTAGATTTTCTTT 100 112 ST40_RS20670 4523344 .. 4523361 + -4.1 -4.36914 GACAACGATCAAACG CCTGC CGTAAATC GCAGG TTTTCTGCACACAGG 64 16 purS NONE ST40_RS20680 NONE purQ NONE ST40_RS20690 4525260 .. 4525278 + -5.8 -4.09685 CTGGGTGCGCGACAT GCCGGCGG TCT CGGCCAGC TTTTCCAGCGTCCAG 65 489 ST40_RS20700 4526465 .. 4526483 + -8.8 -3.15579 CGCGGCGAATATACC GGTGCAGT CTG ACGGCACC TTGATACGGAATTGA 63 14 ST40_RS20710 NONE ST40_RS20715 4528933 .. 4528978 + -6.1 -3.14132 AATGGCAACGGCAAC GCTCTCCGCAGGTAAGCAAACC GCC GGTTTGCCTGCCT-CGCACCGC TTGATACCGGACACA 52 11 ST40_RS20720 NONE ST40_RS20725 4531146 .. 4531162 + -7.2 -4.15565 CTGCAAGCTGGTTCC CTGCGC ATCCA GCGCGG TTTTCAGATCATCCA 71 513 purL 4534459 .. 4534470 + -7.2 -3.66178 CGAATTACATGGCAA CGGC ATAA GCCG TTTGACCTTCAGGAA 65 18 ST40_RS20740 4534752 .. 4534775 + -4.5 -3.12351 GATTGAGTTGACACA TTGC-CGCGC AGGCA GCGCGAGCAC TTGAATCTGCCGCCG 47 35 grxD 4535199 .. 4535217 + -16 -4.84527 GATCGAGGCTTTCAA GGGGCGGT TTG ACCGCCCC TTTTTCGTGTCTCAG 100 57 ST40_RS20755 4536284 .. 4536302 + -5.3 -4.28994 CTTTGTAAGCTGGCC GACTTGA AGAAA TCAGGTC TTTTGCTCAGTCATC 69 158 ST40_RS20765 NONE ST40_RS20770 NONE ST40_RS20775 NONE ST40_RS20780 4540159 .. 4540186 + -7.7 -3.2614 CTTGTAACCACCGAA CGGCA-CATCCC AGTCC GGGCTGTTGCCG TTGATATAGACGCTG 57 209 ST40_RS20795 4543611 .. 4543622 + -3 -4.62471 AACCGATAAGATATT GAAA TACA TTTC TTTTTAGAAGTTCAA 67 158 ST40_RS20840 4554604 .. 4554621 + -4.9 -2.52543 ACGCGAGCAGGCTCG C-TCCTCA GGA TGAGGAAG TGGATTGAGGGAAGT 43 148 rhaI 4556118 .. 4556148 + -9 -4.32034 GCTCATGTGCTCTTC CAGCCTGA-CCGG CAGAAT CCGGATCAGGCCG TTTTCCTGATAGTAG 82 176 ST40_RS20885 4564375 .. 4564399 + -10.2 -2.55253 CTCCCCAGACATGAA TGGATATAAC CTGAA GTTATATCCA TGAGTTCGAGTTAAT 66 27 ST40_RS20890 NONE ST40_RS20895 NONE ST40_RS20900 4569306 .. 4569349 + -7.3 -3.18086 GCCGGGCAAATCCAC CAAGACCGGGGGTCTCCAGC CGTGA GC-GCAGACCCCCGGTAAAG TTGCATCTATCGTTT 59 70 ST40_RS20905 4569977 .. 4569995 + -17.4 -3.64822 GCCGGCAAAAGAAAA GGCCCGCC AGA GGCGGGCC TTTCCGTCAAACCGT 100 66 ST40_RS20915 4573423 .. 4573452 + -11.5 -3.90316 ATTTCCGGCAGAAGG TCTGCGTCGGAGAC GGT GTCGCC-ACGCAGA TGTTTTTCGGCCAGT 82 520 ST40_RS20930 4575571 .. 4575585 + -4.2 -3.96224 GGAGGCACAACCGGT CGAATG AAA CCTTCG TTTCTGAATAATTTC 60 19 ST40_RS20935 4577709 .. 4577729 + -6.8 -3.57615 TGTCGAAATTCATTG GGAGCGGT CCCGC ACCACTCC TTTGACCAATGTTCG 60 289 ST40_RS20940 4580010 .. 4580031 + -11.5 -5.40072 ACCCTTGGGTAGAAG TAGGGCGGC TCCG GCCGCCCTC TTTTTTTGCGCCAGG 100 52 ST40_RS20945 4580894 .. 4580916 + -14.8 -5.40072 GGCTGGCAACGAAAA AGGGCGGCTC ACC GAGCCGCCCG TTTTTTTACCGACGC 100 173 ST40_RS20955 NONE ST40_RS20960 4583371 .. 4583383 + -4.7 -3.05596 CCGTCTCCCGAATGT CGCGC CGT GCCCG TTCCATGCGCCAGTG 46 178 ST40_RS20970 4584749 .. 4584772 + -13.9 -5.44119 CCGTCCACGCACAAT GACACCGGC CCTCGC GCCGGTGTC TTTTTTTGAACTGCA 100 47 ST40_RS20975 4585433 .. 4585452 + -16.4 -3.24 AACGACAAACAAAAA GGGCGGCC CCAA GGCCGCCC TTCGTGACTTGATTT 100 63 ST40_RS20985 NONE aroQ 4587929 .. 4587958 + -5.7 -4.24342 GGAATAGCCGGTGCC GAAGTCGTCGATT GCAA ATTTGACGCCTTC TTTCTTGATCGGCAG 68 394 ST40_RS21000 NONE ST40_RS21005 4591716 .. 4591732 + -5 -2.78816 CCAACCGGATGCGGC GCCAGG ATGAG CCCGGC TGTCATGGGCGATAG 43 501 ST40_RS21015 NONE ST40_RS21020 4594714 .. 4594736 + -19.2 -4.67038 AGGCCGAAGGAGCAA CACCGCGGAC ATT GTCCGCGGTG TTTTGCTTTTCGGCC 100 55 ST40_RS21025 NONE ST40_RS21030 NONE ST40_RS21035 4596944 .. 4596955 + -2.2 -3.31183 TCTTTTGCCGTTCCA CGAC GCCC GTTG TTCCATTTACCTTCT 43 102 ST40_RS21040 4597627 .. 4597647 + -2.4 -4.07568 CTGAAGTTCCTCTTC CGCCAGCT CGCCC AGCACGCG TTTTCCCGCCGCCAC 57 199 ST40_RS29705 4599370 .. 4599392 + -12.7 -4.4518 GCCTTAAACGAACAA GGGCGG-CCC TGAT GGGACCGCCC TTTTCAATTTTGATT 100 276 ST40_RS21060 NONE ST40_RS21065 4605843 .. 4605883 + -12 -2.57463 CTGGACCCCAAAAAT TCT-CCGGGCTTTCAATCC GTTT GAAGTGAAAGCCCGGCAGA CTTGTCAGGACGGTT 72 65 ST40_RS21075 4609883 .. 4609909 + -13.6 -4.56597 GATCTGACGATAATC CGGCAGGCCGGA CCC TCCGGCCCGCCC TTTTTCAAGAAGACA 100 39 ST40_RS21080 NONE ST40_RS21085 4612404 .. 4612415 + -2.2 -3.36054 CGTGAGGCCACAAGG CTTC GTTA GGAG TGTTATGTCAGTTTA 45 67 ST40_RS21090 4613055 .. 4613084 + -25.1 -3.72893 AGTCTTGAAAATGAC GAGGCGTGGCCGG GTTT CCGGCCACGCCTC TTTCATGACGGCCTA 100 54 ST40_RS21100 NONE ST40_RS21105 4614989 .. 4615015 + -8.7 -3.07043 AGCAGTCCTGCAGCC CTGCGCGCTCGC GCGA GCAAGCGC-CAG TATTCCGGTGGTGGC 60 182 ST40_RS21115 NONE ST40_RS21120 NONE ST40_RS21125 NONE fdhF NONE fdhD NONE ST40_RS21140 4622519 .. 4622531 + -9.1 -3.9122 CGCAGGCTCTGACGG GAGGG TTT CCCTC TTCTTTGCCACGATA 73 29 ST40_RS21180 NONE ST40_RS21195 4635496 .. 4635513 + -3.3 -3.74251 TGCGGCCGATTTCGT CAGGCCG GTAA TGGCATG TTTGGTCGAGGTGTA 54 308 ST40_RS21230 4642205 .. 4642226 + -7.2 -3.6215 TATCGTGAAATTGCC TCCGCAGG GGCGTA CCGGCGGA TTTCGGCTGAATTGA 65 126 lysM 4642705 .. 4642732 + -15.6 -3.09272 CTAAGACCGAATTTC CGCAAGCCACGG CGTC CCGTGGCTTGCC TCCTTTTCCGGGTGT 93 37 ST40_RS21240 NONE ST40_RS21245 NONE ST40_RS21250 4646399 .. 4646424 + -16.1 -3.53012 ACTGCGCCTGACCTT TGCCCGGACGG TTAT CCGTCCGGGCC TTTCCGGGAGACCCG 100 40 ST40_RS21255 NONE ST40_RS21260 4648011 .. 4648032 + -13.7 -3.05384 CGCTCTGGCCGGCGA CGCACTGCC AACT GGCGGTGCG TTCGCTGCCGGCACA 84 364 ST40_RS21285 4653295 .. 4653313 + -3.2 -4.70659 TATCGAATAAGTTGT AGATATAA GAT TTATATCG TTTTTAAATATGGAG 70 381 ST40_RS21295 NONE ST40_RS21300 4655711 .. 4655727 + -2.1 -4.07568 ATGATCGAGCAGATC ACGCGGA TGT TCCGGGC TTTTCCGCGACGCCA 57 412 ST40_RS21310 NONE ST40_RS21315 4658687 .. 4658724 + -16.3 -3.82083 ACTCGCCTGATAGAG GGCCTGCCTCGCCACGGA ATA TCCG-GGCGGGGCAGATC TTTGCCTTGTGCTGA 100 31 ST40_RS21320 4659946 .. 4659958 + -4.7 -4.81249 GAAGCCGTTCTCGCG GCCGC GGC GAGGC TTTTTCCATTTCGCC 78 406 ST40_RS21330 4661598 .. 4661635 + -16.9 -4.32049 AAACATTCGCAAATC CCGGAAGAGCCCGGCCA AACA TGGCCGGGCTCGACCTG TTTTGCTGCCTTCTG 100 103 ST40_RS21335 4662684 .. 4662707 + -3.8 -2.91276 GGACCACGCAACTAT CTGACCTCAG TTTT CTGACCTCAG CTTTCTGGCACCGGC 44 22 ST40_RS21340 NONE ST40_RS21345 4664306 .. 4664339 + -13.2 -4.30576 ACCCATGAAGCCAAA CAG-AGACGAGCCCC GACCG GGGGCTCGTCTGCCG TTTTGGTGGTCGACG 100 43 ST40_RS21360 4667581 .. 4667593 + -6.9 -3.54307 CTCATCGCCCATATT GCGGG CAT TCCGC TTTAGCGCCACTCTT 60 8 ST40_RS21365 4669083 .. 4669105 + -7.6 -2.71681 CCTGGAGCAGCGCGT CACCCACCGG ATG CCCGTGGCTG TCGTTGACCGGCTTG 53 433 ST40_RS21375 4671321 .. 4671346 + -6.7 -3.04144 GCCAAGCAGTTTCCA CGGCAGTTCGC TTGC GCTGTCTGCCG TATTGCGCATGACCA 52 185 ST40_RS21390 4674234 .. 4674249 + -3.2 -3.47307 TGCCGAGCATGTGCT TGGCCT GCCG AGGTCG TTCTGATGGTGTTGC 49 4 ST40_RS21395 NONE ST40_RS21400 NONE ST40_RS21405 NONE ST40_RS21410 4677742 .. 4677766 + -10.1 -4.65895 GCTCTATACCTATAT CTTTCCCGA AAATTAG TCGGGAAAG TTTTTGAATGCCAAC 91 75 ST40_RS21415 NONE ST40_RS21420 4679443 .. 4679470 + -6.4 -3.0464 GGATCGGGGAGCCTT TCAATCGGCTGAA AGG TTCAGCC-ACTGA TCTTGCGACTGGGTT 52 160 ST40_RS21425 NONE ST40_RS21430 4680751 .. 4680782 + -5 -3.28712 ATTTTCTCACCGCGG GCTGG-TGAGTGGGC ACA GCCCCCTCATCCCAC TTGTGACAGCAGCAC 52 18 ST40_RS21480 4691026 .. 4691047 + -2.8 -3.13504 CAATCGCTCCTGCGG CCTGGCGG TCTGAT CCGCCTGA TGCTTTTGCTGACCG 43 49 fliP 4691836 .. 4691852 + -5.7 -2.63723 TAGTTACAGCCGTGC GGGCCCG AAT TGTGCCC CTTCGTTAATAGCGG 49 92 ST40_RS21490 4693057 .. 4693077 + -7.5 -3.21354 GTTTTCTGCAGCACT GGTCGGGAT ATG GTCCTGGCC TTCGTAGATATGTAC 54 131 flgF NONE flgG NONE flgA NONE flgH 4705036 .. 4705083 + -20.1 -3.53012 CGCCGCCGGCCCGGC TGATGACGGGCACGATGTCTCG CTCCC CGAG-CATCGTGCCCGTTCTCA TTTCCAGGCCGGAAA 100 92 ST40_RS21545 4706049 .. 4706065 + -2.1 -3.99228 ACATTGGCCCAGCGG GGATTCG ATG CGCCTCC TTTCTGCATTCGTCT 54 151 ST40_RS21550 4706976 .. 4707013 + -6.2 -3.01924 CCGCGGAAACATGCC GCCCG-GCGGGCACCGGC AGCT GTCGGT-CCGGCTCGCGC TGTTCCGCAAGGCTA 52 139 ST40_RS21555 4709305 .. 4709318 + -5.2 -4.38712 GATCTGCCGTCTGTG CGGC AAACCG GCCG TTTTCTGGAAATCAG 70 279 ST40_RS21575 NONE ST40_RS21580 NONE ST40_RS21585 4712638 .. 4712665 + -15 -3.33798 GGTATCCTGTAACGG TGAAAAGCTCCC CGCC GGGAGCTTTTCG TGTATTTATCCCCCT 95 72 ST40_RS21590 4713298 .. 4713310 + -4.7 -3.84712 CCCTGCCCGCTTCCC GACGG CGC CCGGC TTTGCTGTGACCTTG 58 62 ST40_RS21595 4715415 .. 4715440 + -15.5 -3.9281 GGTTAGAACGACATT GGAAAGCGGGC CACG GCCCGCTTTTC TTGTTTCCGGATCCT 100 53 ST40_RS21600 4717605 .. 4717637 + -16.3 -3.5594 CTCACAAACAAGCAT CAGAAACGGCGGGCC ACT GGTCCGCCGTTTTCG TTTACGCCGTGAATT 100 68 ST40_RS21605 4719384 .. 4719403 + -10.8 -3.5393 GTATCGGGGGCAAAT CGTTAACG ATTT CGTTAACG TTTCACAGCGATACT 74 64 flbT NONE flaF 4720232 .. 4720264 + -19.9 -3.08798 ACGATAGAAGATCAA GAAAGGCCGCCAGGG TAA CCTCGGCGGCCTTTC TCTTGACTGCAACGT 100 78 ST40_RS21655 NONE ST40_RS21660 4730344 .. 4730357 + -3.7 -4.07568 TGCCAACCAGAACTG ACCGG CAGT CCGGC TTTTGACCCGCCGGC 60 25 ST40_RS21665 NONE ST40_RS21670 NONE ST40_RS21675 NONE ST40_RS21680 NONE ST40_RS21685 4736622 .. 4736642 + -4 -3.27704 GGCAGTTGGACACAG CCATGACTG ATAT CGGTC-TGG TTGGCTTTGGCCGGT 47 71 ST40_RS21690 NONE ST40_RS21695 4738478 .. 4738490 + -3.3 -4.58395 TGCTTCGCAAACTCC TGTCG AAG CGACC TTTTTGACCCCTCGA 67 6 ST40_RS21700 NONE ST40_RS21705 4741320 .. 4741332 + -6.9 -3.53811 TTGGCAAGCGCCTCC GTGGC AAA GCCGC TTTCGGCCGGGTCAA 58 472 ST40_RS21720 4743782 .. 4743817 + -27.8 -3.68662 TGTACCTGGACAAAC CAAAACGCCCGCCGGA GTGA TCCGGCGGGCGTTTTG TTTGAAATCTTGTCT 100 45 ST40_RS21740 4751302 .. 4751318 + -15.1 -5.63517 GTCAGACACGAAAAA GGCGGCC ACT GGCCGCC TTTTTTATTTGCAGG 100 51 ST40_RS21745 4752021 .. 4752033 + -9.1 -3.59979 GTATGAGAGCTGGAT GAGGC GAT GCCTC TTTCAAGTCGGACGC 68 98 ST40_RS21755 NONE ST40_RS21760 NONE ST40_RS21765 4755728 .. 4755755 + -17 -2.67803 CGAACTCCAAAGAAT TGCCGGACGGTG GCCA CACCGCCCGGCA TACCTTTCATCAGGC 90 73 ST40_RS21775 4757822 .. 4757832 + -6.8 -4.56597 GGCCACCGTTTTCGC CAGC CCA GCTG TTTTTGGAAACAAGC 76 323 ST40_RS21805 NONE ST40_RS21810 4766042 .. 4766068 + -2.9 -5.29782 CGGAAAACAGAAAAA CGCCGGTTC CTTGTCATT GGGCCGGTG TTTTTTGTGGGTATG 84 53 ST40_RS21820 4768617 .. 4768634 + -9.8 -5.49234 AGGATTTTCGAAAAA GGCGCC CGTTGC GGCGCC TTTTTTGTTGCCTCT 100 54 ST40_RS21845 4774856 .. 4774877 + -12.9 -3.767 AAAGTCATGAAGAAA GGCCGGAGC ATAT GCCCCGGCC TTTCCTGAATGGCTG 86 47 ST40_RS21870 NONE ST40_RS21875 4780718 .. 4780734 + -12.3 -3.30243 GGATTCCGGATCTGC GCACAGC ACT GCTGTGC TTGTCCGGAATGACT 78 190 ST40_RS21915 4791009 .. 4791025 + -7.9 -3.07935 AGACACAGGCGAATG CTGCCGG GCT CCAGCAG TTCCATGAATGCCCT 56 435 ST40_RS21925 4792211 .. 4792243 + -7.7 -4.07568 AGACAGAAAGCATTG CGC-GGAAGCGCTC GATTGA GAGCGCTCCCAGTG TTTTCAGGAACGGAG 74 141 ST40_RS21940 4796484 .. 4796506 + -4.8 -3.40299 GGGCCATGGCTTCCT CATCCGCG CCAACCA CGCAGATG TTGTGGCTGTCATGG 49 343 ST40_RS21950 NONE ST40_RS21955 4800648 .. 4800669 + -11.5 -5.00616 TGAACGAGATCAAAA GGGGCATGG GCGA CCTTGCCCC TTTTTTCAAAACCGG 100 49 ST40_RS21960 NONE ST40_RS21965 4802761 .. 4802779 + -5.8 -2.71144 AGAAGACACATGCAA CGAGCGCC ATT GGCGCGCC TCGTTGAAACCAATA 50 225 ST40_RS21970 NONE zwf 4805541 .. 4805563 + -19.2 -3.57615 GCAACTGATATCACT CGCGCAAGGC CCG GCCTTGCGCG TTTCCGGCCTCTTAA 100 33 edd NONE eda 4808271 .. 4808296 + -20.5 -4.66953 AAATTCGAACGAAAA GAGCCGGGCGA CGGA TCGCCCGGCTC TTTTTCAACTGTTCG 100 61 ST40_RS22005 4811636 .. 4811668 + -12 -2.72385 ACTGATCGGCCTTCA GCCGCCGGAATC CACCTGCCT GTTTCCGGCGGC ATTCTCCTTGAATTT 72 36 pgi 4813398 .. 4813424 + -2.9 -3.18264 GCCCTGAAAAGTTGA CGCGGGAACCA CACCT TTGTTTACGCG TTAATACGTGAGGCG 45 26 ST40_RS22015 4813883 .. 4813912 + -7.2 -5.00138 ACGGCAATCCTTACC GGGTCGCTTGCCCG TAAT CGGG-A-GCGATCC TTTTTCGTTTCGGTA 91 9 ST40_RS22020 4814230 .. 4814244 + -3.5 -3.05294 CCTGATCTCAACTGA CCTGA GTCGA TCGGG TCTTCACAGGTTTAC 45 36 ST40_RS22025 4814589 .. 4814622 + -21.1 -4.06502 AATTTAGCGACAATA CCGGGCATGCCCATG GTTT CATGGGCATGCCCGC TTTGCTTTCAGGATC 100 82 ST40_RS22030 4815345 .. 4815370 + -2.7 -4.35581 ATATCAACTCCTTAC GTTTAT-AGGTT GCG AACCTTATCAAC TTTTCGGTGTTTTCA 62 372 ST40_RS22035 4815900 .. 4815921 + -15.9 -4.12397 GAGTAGATAAAAAAA GGCCGGTTC CTCC GAACCGGCC TTTCTCATTCTGTAG 100 96 ST40_RS22045 4817871 .. 4817893 + -3.3 -3.76224 TTCAAGGAACCCGCT CCGGTGACC CATAC GATCACCCG TTTCATCGATACGAC 51 156 ST40_RS22050 4818960 .. 4818972 + -5.5 -3.90922 CCGCCTGACGATTGT CTGTC GAC GGCAG TTGTTTAGGGCCGGT 61 221 ST40_RS22070 NONE ST40_RS22075 4823140 .. 4823151 + -2.2 -3.28785 AATCCAACCCGGGCG TTCG TACC CGGA TTGCCTCTTTTGGGG 43 59 ST40_RS22080 4824691 .. 4824701 + -6.8 -4.26076 CTGACCGGTGGCTAT CGCT TCC AGCG TTTTCCTGACGCTGC 74 202 ST40_RS22085 4825726 .. 4825764 + -5.3 -4.43844 TGACGCTGCAGCGTC TCCTCGTGAAATTCCGCA CCAG TGCCGGGTT-CACGCGGA TTTTCTGCCTCATGA 70 415 ST40_RS22095 4827779 .. 4827795 + -7.3 -3.55548 TGGCGACATCCGCCT TGGTTCA CGA TGAGCCA TTTAGCGGCCTCTTC 62 474 ST40_RS22110 NONE ilvN 4831897 .. 4831923 + -21.6 -5.83211 GCTTTCTGATCTCAA GGCCCGTCGCAC CCG GTGCGGCGGGCC TTTTTTGTTTTCCTG 100 47 ST40_RS22120 4832896 .. 4832926 + -12.5 -2.84527 CAGCAGCGCAATACC GAGAGGCCTGTGG CATTT CCACAGGCCCCGC CTTTCCTAAAGCTTG 76 52 serA 4835214 .. 4835247 + -14.1 -4.58685 CCGGCCTTCAGAAAC GACAAAAGCCCTGGAG CAT TTCCAGGGCTTTT-TC TTTTTCAAACGCTTT 100 46 ST40_RS22140 NONE ST40_RS22145 4838945 .. 4838960 + -3.3 -3.33885 CAACACTGAAAAACA TTGTC TCTAGT GACAA TTCCTCGTTTGACTT 47 16 ST40_RS22150 NONE ST40_RS22155 4840402 .. 4840418 + -9.4 -4.36914 CTGAAACATCCTTCC GGCTGC ACCCC GCAGCC TTTTCTCGAGAACCG 84 37 ST40_RS22160 4841113 .. 4841127 + -5.6 -2.70932 GGGGCGAATCCGATA GGCTCG CCC CTAGCC TCCTTCAACCGGACC 47 79 ST40_RS22165 4842161 .. 4842171 + -6.8 -3.53343 ACCGTGCGCAGGTCC GGCA GGT TGCC TTTCGGCAAGGCATT 58 495 ST40_RS22185 4845420 .. 4845449 + -10.6 -5.626 GGCTGATTATGAGCA GGCGGCCGCTGC CTTATC GCAACGGCCGAC TTTTTTTCTGCGGTC 100 35 gatC NONE ST40_RS22220 NONE gatA 4851370 .. 4851411 + -12.2 -3.18044 CTGATCCCGTTTGTT GATATGC-GCCCCGGACCG TTGAT CGGCCCGGGGCTGCACACC TGATTTTCTCCGGTC 78 37 ST40_RS22230 4852972 .. 4852992 + -2.5 -5.01732 AACAAGCGTACGATG TTGCATTGC ACA GGAATGCCA TTTTTTGGACCGGTT 74 103 ST40_RS22235 NONE ST40_RS22240 NONE mdoH 4857156 .. 4857170 + -5.7 -3.53012 CGATCTCGTCCAGAA CCTTC CAGAA GAAGG TTTCCAGCCGCACCG 55 374 ST40_RS22270 4861845 .. 4861868 + -8.2 -2.50816 GATACTCTTGCCCGG CAGATCGGCA ACAC TGTTGATCTG GTTGGTGAGTGAAAG 52 384 ST40_RS22285 NONE ilvC 4865273 .. 4865300 + -17.8 -4.62872 CCATCGACCCGAAAC GAGACCCCGCTG GCAA CAGCGGGGTTTC TTTTTGCCGGTTCCT 100 52 ST40_RS22295 4867127 .. 4867161 + -6.6 -4.07568 GCGCCTGGGACGTCA TCTG-CCGG--GCGAAG GCCG CTTCGCTTCCGGCCAGA TTTTCGGCAACGGCA 68 399 ST40_RS22320 NONE ST40_RS22325 4872360 .. 4872377 + -7.7 -3.68798 CGTGGTTTGCACGGG CC-GTCCG ATG CGGACAGG TTGGTTGTTTTACAA 65 157 ST40_RS22330 4873380 .. 4873411 + -15.8 -2.62513 TAATCAAATCAGACG CTGCCCGGACGGTC AGAA GGCCGCCTGGGCAG GTTCGTTCGCCTTGT 85 38 ST40_RS22345 NONE ST40_RS22350 NONE ST40_RS22355 4880191 .. 4880208 + -6.3 -3.98842 GCCAAGACAGACCCA TGATCGCG GTT CGCGA-CA TTTCTGGATCTTCTC 65 348 ST40_RS22360 4882062 .. 4882101 + -13.8 -4.77173 GACCTGACACGAAAA GCCTCCTGAACC--ACCG ATTTTC CGGTAAGGTTCAGGAGGC TTTGTTTTGTCGGGG 100 96 ST40_RS22365 4882719 .. 4882736 + -14.1 -3.11836 CTGGATCCGCCAAAA GGGCCGC AGAA GCGGCCC CTTTTCAATCCGTGT 91 71 ST40_RS22375 4884254 .. 4884297 + -6.5 -3.15663 CATTTGGACATCCCG GTGCCCCGGTGATCGCCGA CGTAAT TCGCCAGCCGCCGGCGCAC TTCCTCCGGATCCAT 54 406 serB 4887528 .. 4887545 + -14.1 -3.61267 GAAAGCAGAAAAAAA GGGCGCC TCAC GGCGCCC TTCTGCTTTCAGCTT 95 439 ST40_RS22430 NONE ST40_RS22435 NONE ST40_RS22440 4895597 .. 4895611 + -8.6 -3.16071 ACAGCGCTGCGCGCT TCCTCA AGA TGAGGA TGTATTGGTGTCAGG 62 196 ST40_RS22450 4898703 .. 4898718 + -6.8 -2.73994 ATCAGCCGCCGGCTT TCCGGG TTGG TCCGGA TCATCTTCAGCAGAT 50 462 ssrA 4899692 .. 4899706 + -7.2 -4.8048 ATCTGGGTTCACTTG GAAAAG AGC CTTTTC TTTTTGATCTCGGCC 86 118 ST40_RS22465 NONE ST40_RS22470 NONE ST40_RS22475 4901082 .. 4901092 + -8.2 -3.15544 CCATCCTTCGAGACA GCGC TGC GCGC TTCCTCAGGATGAGG 60 222 ST40_RS22490 4907484 .. 4907501 + -5.5 -3.72324 CCCGACACGATGATC GCGCAAC TGCG GTTGCGG TTGTTCATGCGGGTG 60 207 ST40_RS22500 4911124 .. 4911155 + -2.2 -3.5774 GGACACCTGCAGGAA TTCCG-CCTAGAGGA TTG TCCGCAAGGTCAGAA TTTCGAAGGTTCCGT 47 42 ST40_RS22515 4914566 .. 4914590 + -20.1 -5.03994 CTGTGCACAAGAAAA GACCCGCCGAA AAT TTCGGCGGGTC TTTTTGTATCTGCAG 100 70 ST40_RS22525 4916701 .. 4916729 + -2.9 -2.71364 ACTGATACCCACGGC CACCGCCATCGGA AAA TCCGCTGGAGGAC TGCTTGGCACGCTGC 39 394 ST40_RS22545 4922480 .. 4922505 + -7.6 -5.60993 GAAAACTGCACCACA GGGCGGG--AGC TTCG GCTAACCCGCCC TTTTTTTGTCCACCG 100 56 ST40_RS22650 NONE ST40_RS22655 4949306 .. 4949318 + -3.3 -4.18042 GGAAAATCTCTCGAT CTGTC CGG GGCGG TTTGCTTTCTGTGGC 62 318 ST40_RS22665 NONE ST40_RS22670 4952273 .. 4952302 + -5.7 -4.25104 GACGCCAACGGCTAA CGTCCCCTTAGGAT TTC ATTCCG-GGGGACG TTTTCGTGAAACACG 71 120 ST40_RS22675 NONE ST40_RS22680 4953929 .. 4953940 + -2.2 -3.64609 CCGCTCCAGATAGAC CGGA CGGA TCTG TTTCAGGTGCTTCTG 49 343 ST40_RS22690 4955879 .. 4955913 + -20.1 -2.71924 CTTCAGTGCACAAAA AGAAAACCCCGCCGG AAATC CCGGCGGGGTTTTCA GTTTGCCCACGGCTG 100 50 ST40_RS22710 4961034 .. 4961058 + -9.2 -3.17723 CGCGGCATCCTGAGC GGCCGACTGC CGTTC GCGGTCTGCC TTGCGTTCGGAGTAA 61 78 ST40_RS22750 4968038 .. 4968065 + -3.4 -5.0925 CAGCCTCCGCCAGAC GCAGCAGAAACGG ATC CCGTT-CTTCTGA TTTTTCGTTTTCCGA 80 225 ST40_RS22760 4971893 .. 4971930 + -14.3 -3.96216 TCCAATAGATCGAAG AAAAAGAACGGCCATCT GATT GGGTGGCCGTTCTTTTG TTATTTCGCTGCAGA 100 48 ST40_RS22765 4973951 .. 4973962 + -7.2 -3.39895 TCCGGTTTCTAACTC CCGC TCCT GCGG TTAATTCATGCAGAC 61 129 ST40_RS22780 4976344 .. 4976390 + -14.5 -4.17048 GTACTGAAGAACTCG TGGCAACAAACGACCGACCGG CCGAA CCGGTCACCCGTTTGTTGTCA TTCTTTTCAGAAGGG 100 59 ST40_RS22795 4979331 .. 4979350 + -4.2 -5.27779 AATATTCTTTTTTGA CCGCA-CGG CTT CCGCTTCGG TTTTTTCCTCTTCGG 89 68 ftrA 5005819 .. 5005830 + -5.8 -3.21276 CTGATGCCAGCGGCC CTGC CCCA GCAG TATTGTCCCAGCAGA 54 37 ST40_RS22945 5007765 .. 5007782 + -9.9 -3.87815 AAAAGCTTAAATCGT CTGCAGA TACT TCTGCAG TTTCTCGCGCTGCGG 76 31 ST40_RS22970 NONE ST40_RS22975 NONE ST40_RS22980 5015156 .. 5015170 + -7.1 -3.14463 CTCCGAGAAGCAACA CCGTC TTTCC GACGG TTAATACCGAACCTT 54 120 ST40_RS22985 NONE ST40_RS22990 5017288 .. 5017301 + -2.3 -2.7169 GACACCAGCCGGTAA CCTGG AGGA CCACG ATGTTTCTCGACGTT 39 26 ST40_RS22995 NONE ST40_RS23000 5019280 .. 5019307 + -19.2 -2.88544 CTTCCGCCAGAACAA TCAGCCTCCGGC AACT GCCGGAGGCTGG TCTGTGCACATCAGA 100 43 ST40_RS23010 NONE ST40_RS23015 NONE ST40_RS23020 NONE ST40_RS23025 NONE ST40_RS23030 5028715 .. 5028727 + -4.7 -2.71364 AACCTTTTGAGAACA AGGGC GAA GCCCC TCCTTCAAGCCGTGC 45 509 ST40_RS23060 5031472 .. 5031494 + -11.4 -2.77431 TTAACGAAGATTTGA CATGTACGCA ATT TGCGTATATG CTTTCAACGTATTTT 69 189 ST40_RS23065 5032189 .. 5032235 + -7.1 -4.07885 TCGTGAACAGCCAGC GGCGCAGCTGCGTACCG-CAGT GGAA GCTGGCGTGATGCCGCAGCGCC TTTTCCAGCGAGGTC 68 367 ST40_RS23075 5033126 .. 5033146 + -15.4 -4.17701 AACCTTCCAAGAAAG GGCCGCGC GTCTA GCGCGGCC TTTCTCGTTTATCAG 100 51 ST40_RS23085 NONE ST40_RS23090 NONE ST40_RS23095 NONE ST40_RS23100 NONE ST40_RS23105 NONE ST40_RS23110 5041388 .. 5041427 + -15.8 -4.63932 AGAAGGCAGTCTGAT CAGACACCGTCCGCGGT CAAAGCA ACCGCGGACGG-GCCTG TTTTGTTGGGCGGTC 100 27 ST40_RS23120 5043814 .. 5043834 + -15.4 -3.01791 GGCAAACACACCAAG GCCGCGCC GCAAG GGCGCGGC TCTTGCCCGGCACAT 91 46 ST40_RS23125 5045760 .. 5045794 + -15.1 -3.56593 CTCCCCCACCACCCG CACAGAAACCGGCAGG CCCG CCTGCCGGTTTC-GAG TTGTCATTCTCCCCT 95 42 ST40_RS23145 5050532 .. 5050556 + -3.3 -3.82097 GGCAGGGCCTCACGT CAGGCGGTCGC CCC GCGCGTGCCAG TTTCGTGAATTTCGA 54 49 ST40_RS23165 NONE ST40_RS23170 5055932 .. 5055966 + -9.1 -3.53343 CCGGATCACCCTTAG GAAACCGTCCCGCGCC CTCG GGCGCGGG-CGGACAC TTTCAAAGCAAGGTT 68 45 ST40_RS23175 5056696 .. 5056714 + -5.8 -2.89564 TCGAAAAACGCGCAA GGCGCGGC ATT GCGGGGCC TGTGTGAGATGAGCG 51 0 ST40_RS23180 NONE ST40_RS23185 5058812 .. 5058833 + -17.3 -3.01217 GTTTCCCGAAATAGT GGGCAGGCC GCCT GGCCTGCCC TATCCTGTTGTTTTG 100 135 ST40_RS23190 NONE ST40_RS23195 5061867 .. 5061882 + -3.2 -2.90496 GTCCTGGCGGCTCTA TGGTGG CTCC CCATCG TGATTTCCGGCAAGA 42 7 ST40_RS23200 NONE ST40_RS23205 5064672 .. 5064689 + -6.9 -2.73364 CCAATCGACCGGAAA GGATCGG CCTC CCGCTCC TGCTTGAAATCCGGG 50 128 ST40_RS23230 NONE ST40_RS23235 5070292 .. 5070326 + -23 -4.37658 CACGCGCCGGAAACA AAAAACCGGGGCCTGG TTT CCAGGCCCCGGTTTTC TTTTGTCCAAAACTT 100 42 ST40_RS23245 5071648 .. 5071681 + -9.6 -5.00884 ACTAGCCGAAACAGA AAAGGCTCCGGC AATCTCGCAA GCCGGAGCCTTC TTTTTTACGCCAGAT 100 36 ST40_RS23255 5073724 .. 5073762 + -8.1 -2.83903 CCGTGATCTCCGCCT TTTC-CAGCCCGTCCGGC GAAA GCCAGACGGGCTCTGCAA TCAGTTTTTCGCAGA 55 83 ST40_RS23280 5077822 .. 5077865 + -2.4 -4.14472 GAGACCGCGGACGCT TAACCCCTTCCGGTTTCG CATCATCA CGAAAGCGGAAATGGTCA TTTTGAAAATGTTAC 56 23 dctP 5078917 .. 5078940 + -21 -3.3676 GTAATCCGGTCAAGA CCCCGGGCGG TTTG CCGCCCGGGG TTCTGGAATGTTGGA 100 37 ST40_RS23290 NONE ST40_RS23295 NONE ST40_RS23300 5082926 .. 5082938 + -7.7 -3.45134 GCCGCTAAAGCGGCT CCTCA GGA TGAGG TTGTGAGTTGGTTAA 61 210 ST40_RS23335 5089529 .. 5089545 + -7.9 -3.72576 CCAGTGCCCCAGCAA GACTGGC GGA GCCAGGC TTTCATGGGGACGGA 65 77 ST40_RS23345 5091146 .. 5091160 + -2.8 -4.56597 CTTAACCAGCACTTT TCGG TTCATTC CCGA TTTTTCCGAGACCGG 67 137 ST40_RS23350 5093222 .. 5093258 + -7.2 -3.00525 CCTTCCTTCCCGATC TCCCTGCCCGG-GCG CCATACAC CGCCCCGGGCAGGAC TATCCTTTCCAAAAC 56 44 metK 5094485 .. 5094523 + -22.5 -2.73124 AGAGTAAGAAAACAG CG-AAGCCCCGGCACGGC ATCC GCCGCGCCGGGGCTTTCG GTTTACCGGATCAGA 100 34 ST40_RS23380 NONE ST40_RS23385 5098215 .. 5098240 + -6.8 -3.73775 TCTCATCGTTTCACC CCGGACGCCTC ATGAC GAG-CGACCGG TTTCCTCAACCTCCA 62 308 ST40_RS23390 5099473 .. 5099505 + -16.4 -3.53091 CAACGCAGCATGAGC CAG-AACGGCGCGGG GCAA CCTGCGCCGTTTCTG TTTCAGCAAGGCCCT 100 28 ST40_RS23395 5100334 .. 5100345 + -3 -3.90328 AGCTGAATATATAAA GAAA ATAC TTTC TTTATCGAGGTTGTC 54 172 ST40_RS23400 5102140 .. 5102158 + -5.2 -3.05384 GATCAGGGGGACGTC CCATCCGG GTC CTGCATGG TTGCCTGAAGCCGCA 46 335 ST40_RS23410 NONE ST40_RS23415 5106164 .. 5106179 + -10.4 -3.53091 CGCGTTGAGGCGAAG CCACCG GTTT CGGTGG TTTGGGAGCGGGCGT 70 471 carA 5113797 .. 5113821 + -22.9 -5.1675 GCCTCAAATAAAAAA CCCCGGCGTGC AGT GCACGCCGGGG TTTTTTGATAACTGA 100 126 ST40_RS23450 5115472 .. 5115482 + -4.6 -3.09516 AGGTCGACTTTCACG CCCT GGC GGGG TTCCCTCCTGCGCAG 47 63 carB 5118986 .. 5119017 + -13.1 -4.96501 CTATTATACTCGTGA CC-GGCCGGGAAAG CGCGC CTTTCCCGGCTTGG TTTGTTTTTGTCAAA 100 43 greA 5119551 .. 5119564 + -2.3 -3.76373 GTGGACGTACGCTTC GTCTG ACCC CAGCC TTTCAGTGTTGAGCC 50 20 ST40_RS23465 5120615 .. 5120641 + -10 -3.01712 CGCCGTAGAAGCTTT GCGCTTTGCCGG TAT CCGGCGATGCGA TGTTGGCAACGACAC 64 363 ST40_RS23480 NONE trxB 5123379 .. 5123404 + -6.8 -2.78384 AGTGACGTCGACAAA G-CAGGCCGCC GAATA GGCTGCCTGAC TGTCCTGCGGAGGGG 52 10 ST40_RS23490 5124304 .. 5124331 + -9.8 -2.94235 CTGCTGGCAAATGCA GAAGGCTGGGTT TTCT AACCCTGCCCTC CTTTCGTCTATCTGC 65 8 ST40_RS23505 5129235 .. 5129251 + -6.5 -3.92592 GGTGCCAGCACGCCC CAGACCA GCG TGGCCTG TTTGGTCTTGCCGAT 65 280 ST40_RS23530 5132946 .. 5132958 + -3.3 -5.16841 TTCATCGATGATCGT GCACT TGA AGCGC TTTTTCTTGGTCTGG 84 124 ST40_RS23540 NONE ST40_RS23545 5134984 .. 5135005 + -11.5 -2.64274 ACAGCTTGACATACA AGGAGCCGC CGCG GCGGCTCCG TCCGTTTCAGGAAGT 68 40 ST40_RS23550 NONE ST40_RS23555 5137527 .. 5137544 + -8.3 -3.1876 CAAGACGATCGGCCT CGGGCAC CGCA GCGCCCG TTGCTGCATAGGCTT 62 221 ST40_RS23565 NONE ST40_RS23570 NONE ST40_RS23575 5142469 .. 5142487 + -5.9 -3.21464 CTTCCTTCCGATCCG CACCCGC GGCAA GCGTGTG TTCAATGTTGATCTT 54 299 ST40_RS23590 NONE ST40_RS23595 NONE ST40_RS23600 5146233 .. 5146269 + -5.7 -4.48987 GCGGAAACCGTCCAG GGTCCAGTTGGCGGCAA CCT TTTCCGGATGCTGGACC TTTTCGTTGTGCGCC 74 200 betC 5149485 .. 5149503 + -4.5 -4.24342 AAGCCAGAGGTATCC GCGGG GAGAGTGAA CCCGC TTTCTTCCTGGACCG 66 13 ST40_RS23615 5150688 .. 5150700 + -4.8 -3.484 TCCTCCGCGCAAGAT GCAG CTTGT CTGC TTGTGATCTGATGAA 52 439 ST40_RS23625 5151471 .. 5151489 + -5.2 -4.09685 CGGCCTGACGGAGGC TGACGGTG CGC CGCCTTCA TTTTCCAGGATCCGC 65 75 ST40_RS23630 5151931 .. 5151962 + -5.8 -5.70829 TGTCCAACTTTTCCA TCGGCCCGCA CCACCTGCCCTT CGCGGGCCGA TTTTTTTCTGATCTT 100 129 uvrB 5155050 .. 5155063 + -3.7 -3.02511 GACGGTAAAGAGATC CCCCC GCTA GAGGG TATTCAAAAGCTCGA 45 33 ST40_RS23655 5160190 .. 5160205 + -5.4 -3.91716 ATGTCGCCGTCTGTC TCGATC GCCA GATCGG TTGTTTCCCCACTGC 62 284 ST40_RS23670 5162595 .. 5162625 + -9.8 -4.56775 ATAACACGAGCAGAT C-AGGCCCCGG-CT ATCCA AGTCCGGGGCCTCG TTTTTCAAAGACCGT 91 78 ST40_RS23675 5163573 .. 5163594 + -6.6 -3.9279 GTCGCTTGCGAGGAA GGCGAA-GG AATAG CCGTTCGCC TTTGTACCCTTGCCT 65 278 ST40_RS23695 NONE ST40_RS23700 5168742 .. 5168768 + -5.8 -3.27525 AGCCAGAACGGCGCG CACGATCGCC TTGGACT GGCGGTCCTG TTCCATTTCGCCGAC 52 379 ST40_RS23710 5171183 .. 5171196 + -2.4 -4.2602 ACAATCCACCGGGCT GTGA CCGGTA TCAC TTCTTTGTTGATGTC 60 40 ST40_RS23715 5172895 .. 5172915 + -11.9 -3.2614 CTGGTCGGCCACCCT GTCGATCAG CAT CTGATCGGC TTCGTGTGGCCCCTC 69 523 ST40_RS23725 5174597 .. 5174621 + -12.9 -2.80935 GATCCCAGAATGTTG ATCAGACGCAC GGA GTGCGTCTGAG TGTGGTGACTCGACT 76 137 ST40_RS23730 5175584 .. 5175616 + -17.7 -4.57073 GCTTGAGAGCATGAA GCAAGTGGGCGCAGC CTT GCTGCGCCCACATTC TTTTTACCGACAATG 100 67 ST40_RS23735 NONE rlmJ NONE ST40_RS23745 5177704 .. 5177716 + -3.4 -2.50816 GCACTAGGGCCACGG CTTC CCCAA GAAG GTTGATCCATGGCGC 40 34 ST40_RS23750 NONE ST40_RS23755 5179107 .. 5179132 + -11.8 -5.7946 AGCAACATGCAATCA GCCAGCCCTG GTAACG CAGGGCCGGC TTTTTTTGTTCGGCG 100 53 ST40_RS23760 5180084 .. 5180106 + -6.2 -4.07885 GCAGTATCCCCTCGC CGTCGAAGTT ACC AACCCCGACG TTTTCGCAAACGATC 65 421 ST40_RS23770 NONE ST40_RS23775 5182820 .. 5182830 + -2.6 -2.91872 TGTCAGTTTAGCACT TAAA TCT TTTA TAGTATTTGGTTCTT 40 46 ST40_RS23780 NONE ST40_RS23785 NONE ST40_RS23790 5185472 .. 5185523 + -9.7 -4.1899 CATGATGCGGACCCA GGTGACCG-GGCGCATGGCTTCGCC TTCCAC GGCGA--CCATG-GCTTCGGTCACC TTTTCGATCAGCTGG 79 258 ST40_RS23800 5187341 .. 5187369 + -7.4 -2.52464 AAGGCCTGCGTGAAC TCGGGGTGTGAA AAGGC TTCGCGCCCCCA TGACTTCCCGAAGCC 53 15 ST40_RS23805 5189229 .. 5189239 + -8.2 -4.09864 TTTTGCCGTGAAGCT GCGC GAA GCGC TTTTGCCCCATCAAT 77 97 hisN 5200535 .. 5200545 + -2.4 -3.32844 CTGCGCTCTCGGCTG CGCG CGC CACG TTCTCGCGTAGCGGA 44 420 ST40_RS23895 5212914 .. 5212924 + -2.4 -2.674 GCAGAGCACCGCTTC GCCG CAC CCGC CTCTTTCCCTATTGC 38 66 uvrC 5214917 .. 5214929 + -7.7 -4.2828 AGGCGATTGCCAAAC TGGTC TAC GACCA TTTTCATGAATAGGA 77 0 ST40_RS23905 5216620 .. 5216636 + -10.8 -3.63744 GACAAACCGGCACCC GGCGCG TCTTT CGCGCC TCTTTTGGAAACGGG 76 86 ST40_RS23910 NONE ST40_RS23915 NONE ST40_RS23920 5220314 .. 5220330 + -2.1 -4.1721 ACCGCGCGCACTCTG GTCAGCG ATC CGAAGAC TTTTGGGGTATGCAT 56 187 mscL 5220798 .. 5220818 + -6.8 -3.39449 TGCCTGATTTCACCC TCGCGGGA CCCTT TACCGCGA TTACTCTTCCTCGCC 58 34 ST40_RS23935 NONE ST40_RS23940 NONE modA NONE ST40_RS23950 5224844 .. 5224854 + -2.4 -3.01712 ATAGTCAGGGCGCTG CCGG GAA CCCG TATTCCGGGCCGAGA 42 69 pgsA 5225504 .. 5225514 + -2.4 -3.73775 GGCCCTGACCGCACA CCAC CTG GAGG TTTCATGAACATCCG 50 54 moaD NONE ST40_RS23965 5226270 .. 5226282 + -4.7 -3.97689 TGCTATTGATTCAAG GCCGC TCT GCCGC TTCTTTCCCATTCTC 60 60 ST40_RS23970 5228060 .. 5228078 + -5.9 -4.58663 TTTCGTCGGCTCCAA GAAGCCG CAAGT CGGCTGC TTTTTCCCGGCTGGT 76 430 ST40_RS23980 5229367 .. 5229384 + -14.1 -4.02022 AACCGCAAAATAAAA GGCGGGC CAAT GCCCGCC TTTCTGGTCCTTGCC 100 28 ST40_RS23990 NONE ST40_RS23995 5231928 .. 5231940 + -6.9 -2.94747 ACGGTTCCCCTGAAA CCGCT GAT GGCGG TCTATCGTCAGGTCG 53 91 ST40_RS24000 5233286 .. 5233323 + -3.3 -4.07687 AAACTTTACTTTCCA GGCAGGAATTCGCCGCCA TAC TGGCCGAGAGA-CTTGCC TTTTCAGCCACCAGT 58 43 ST40_RS24005 5235295 .. 5235318 + -5.2 -3.10493 GGCAGCGCTCAGGCG CCT-GCCGGGG CCT CTCCGCCGAGG TCTGTGTCTTCCCGG 50 484 ST40_RS24020 5236874 .. 5236905 + -21 -2.90194 TTCGGGCCAGGTAAC CAAAAGGCCGCCGG AGTT TCGGCGGCCTTTTG TCTGATTAAACCCGT 100 72 lgt NONE ST40_RS24045 NONE pgeF NONE ST40_RS24055 5243034 .. 5243044 + -8.2 -3.53012 CCTTGCGGCCCGGTT CGCG TTT CGCG TTTCCGGCAGGGCCG 65 52 ST40_RS24060 5243681 .. 5243696 + -6.1 -3.42574 AAAAAAAGCGGGCGT CAGGC ACGAAC GCCTG TTGTGGTCCGGTTGC 56 86 ST40_RS24065 5244818 .. 5244837 + -16.4 -4.74103 GTCGACTGCTCAAGA CGCCCGGC CCGT GCCGGGCG TTTTTGCGTTCAGCC 100 51 ST40_RS24070 5246240 .. 5246260 + -6.8 -2.80556 CGCCGGCGATTCCCG GCCGCG GGGTTCAAG CGCGGC ATTCATTCTTTTCCC 52 75 ST40_RS24075 NONE ST40_RS24080 5248908 .. 5248931 + -4.6 -2.62263 AACCCGGAGGCGGCA GAATGACCGAG ATC CTCGA-CATTC TCATCTCCGCCAACT 44 20 ST40_RS24085 NONE ST40_RS24090 5251384 .. 5251415 + -8.6 -3.50853 AGGCAACGTCGAAGA CGTCGACGACGCAC AGCA GTGGGGCGTGGACG TTCTGGTTCACCCGC 62 253 ST40_RS24100 NONE ST40_RS24105 5253645 .. 5253669 + -5.6 -2.62983 AAACGTCGTTCGCCC TCCCTGGTGC GGTCG GCACCCGCGA TCATGTGGCCATGCA 46 235 ST40_RS24115 5254822 .. 5254839 + -12.7 -5.63517 GGGAAAACTTGCAGA GCAGCCG CCAT CGGCTGC TTTTTTGTTTCAGGA 100 95 pth 5256148 .. 5256169 + -5.1 -3.59979 CTCGATGCTGATCCC GC-GGAACGG GTG CGGTTCCTGC TTTCGCATGGACCGG 54 472 ychF 5259396 .. 5259424 + -17.4 -3.60296 CACCTGACGAAATCC CGCGCAGGCAGC CAAGC GCCGCCTGCGCG TTTCCCGTCCGCCTC 100 34 ST40_RS24140 5260984 .. 5261003 + -3.6 -2.90763 CCCGGTACAAGCAGG CTTTCG TCAATTCT CGAAAG TGTCTGCGATGTCGA 44 163 ST40_RS24145 5261756 .. 5261783 + -21.4 -2.85813 TTGCCGCATTGCAAG GGCCCGGAAAGC AGCC GCTTTCCGGGCC TCGTCTTATTGGCCT 100 86 ST40_RS24150 5263983 .. 5264002 + -6.4 -3.66666 CTTGTAACGCAGCAC CGCGTAGTC ACC GGC-ACGCG TTTCCCGCTTTTCGA 60 226 ST40_RS24160 5265834 .. 5265845 + -2.2 -3.28712 TTTACTTCCGATACG GCTG GGAC TAGC TTCTGAACGCAACAC 43 80 ST40_RS24165 5266288 .. 5266301 + -5.9 -3.53811 ATCTCAAGGCGGGAA CGCGG ACCA TCGCG TTTCCGCGGACTGCC 57 53 ST40_RS24170 NONE ST40_RS24175 5267689 .. 5267723 + -17.2 -3.56092 TGCCTGTTCCAGGCA CTGCGGCAAACGGACA TCA TGCCCATTTGCCGCAG TTTGCCACGTGATGC 100 447 ST40_RS24190 5270445 .. 5270465 + -5.4 -3.73813 GCCCATCGGTCTGCC AGAAGCTG GAACA CAGCTTCC TTGTCTTCCTCGTTG 60 525 ST40_RS24265 NONE hemF 5287076 .. 5287092 + -4.3 -3.93695 GGTTTCAGAATCTCG CGACCGA ACA TCGGATG TTTGTCGATAATGGC 59 370 ST40_RS24300 NONE ST40_RS24305 NONE ST40_RS24310 NONE ST40_RS24315 5298031 .. 5298041 + -8.2 -3.15544 CCATCCTTCGAGACA GGCC TTC GGCC TTCCTCAGGATGAGG 60 117 ST40_RS24325 5300063 .. 5300074 + -7.2 -3.05384 GAAATTTCCAGGTGA GCCG GCTC CGGC TTACCTCGGAAGACG 57 49 ST40_RS24335 5302057 .. 5302077 + -6.7 -3.14564 AGAAGTCGCCATTCC GGGCGGCAG GCC CTGAGGCCC TTCCTGCAGGCCTGA 54 10 mtnA 5304201 .. 5304214 + -5.9 -3.03159 TGCGGCCGAGAAGCC CCTGC AGAC GCGGG TCTTCGGCAACTTCG 49 131 ST40_RS24355 5305166 .. 5305177 + -2.2 -2.6999 CCGCCGCGATGGCCC GCAT CAAC GTGC TCGTCTAGATTTTCC 38 6 ST40_RS24360 5305630 .. 5305664 + -6.5 -2.71144 CCGGGCATGACATCA GCGG-GCGTTCAACAG AGCC TTGTTGAACGCACTGA TGATTGCCCCGCCTC 52 45 mnmA NONE ST40_RS24415 5318713 .. 5318734 + -5.1 -5.05782 TTCGAGAGAGGCAAT TCGTCGGAC AAGC GTTTGGCGA TTTTTTCGCCTGCCT 83 258 ST40_RS24425 5322780 .. 5322825 + -3.4 -2.73875 CGAACCGGACCTATT CAAC-TCGTCATT-GGAGGCCC AAGT GGGTTTCCTAACGAAGACGTTG TCATGTTGGCCGAAG 41 106 ST40_RS24430 5324293 .. 5324305 + -3.4 -3.61646 GTCAAATTGGATATG TTGG CCAGA CCAA TTCCTTTCTAGCGTT 51 306 ST40_RS24435 5325621 .. 5325652 + -2.9 -3.86897 TGGCGTGCGCCGTTC CCTCGATCTTCGCC CCGAA GGCGCAGGAC-AGG TTTCTGCCACCTCGG 54 57 ST40_RS24440 5327526 .. 5327540 + -7 -3.02511 AAGCGATCTCGAACC CGGCGC ACA GCGCGG TGTTGGCGACATGGC 54 136 ST40_RS24450 5329172 .. 5329202 + -16.1 -3.13164 GCTGTAAGCAAAGCA CGCGCGGGCCG-CC TTCG GGACGGCCCGCGCC TTCCCTGATTCCAGC 93 34 ST40_RS24455 NONE ST40_RS24460 NONE ST40_RS24465 NONE hydA NONE ST40_RS24475 5334280 .. 5334290 + -2.4 -3.9243 TAGACGCGATCTGCA CGAC GAC GGCG TTGTTTGAAAGCTTC 54 309 ST40_RS24490 NONE ST40_RS24495 NONE ST40_RS24500 5338198 .. 5338222 + -2.7 -3.54424 GTTCGCGCTGCCCTT TCGCAGTGGGT GTA GCGCGCTGAGA TTTACCAGCCTGGCA 49 11 ST40_RS24505 5338646 .. 5338663 + -4.7 -2.63596 ACCCTGTATCGATGC TCCGGAC TTCC GACCGGG TAATCTCCACTGGAG 44 75 galE 5343657 .. 5343686 + -15.1 -3.33696 TGACGCCTGACATGT TTGAGCCGGCAAG CGAA CTTGCCGACTCAA TTCATTGGCGGAGCC 95 48 ST40_RS24605 NONE ST40_RS24610 NONE rfbA 5368064 .. 5368076 + -7.7 -3.95153 GGCAAACAGATAGGC CGACA GAC TGTCG TTTGTCAGTGATTGC 69 236 ST40_RS24630 NONE ST40_RS24635 5377477 .. 5377494 + -2.7 -3.47078 CATCGCCGTGCATAT TTCCG TCGACGTC CGGAA TTCTGATATAAGGTG 49 98 ST40_RS24640 NONE ST40_RS24645 NONE ST40_RS24650 5382191 .. 5382210 + -7.2 -4.07687 AAGACGGGTCATGAT C-GACACGT TGA ACGTGTCAG TTTTGACCCGAAAAT 74 27 ST40_RS24655 5383693 .. 5383725 + -6.9 -3.02144 ACATCACGTCGAACT TGCCGCACC-GCCC GGAACA GGGAAGGTGCGGCC TCTTCCCCGGAGTCC 54 57 ST40_RS24660 5385470 .. 5385487 + -2.6 -3.27525 CGCAAGGCCGAAGTC CGCGCA TCCCAC TGAGCG TTCAATTTCGAGGAA 43 11 ST40_RS24665 5386740 .. 5386765 + -16.9 -2.61695 AGGTTCGGGCGTCGG GGCCCGTGAGC GTCA GTTCACGGGCC ATCTTTCGCAGTAAC 89 195 ST40_RS24670 5389454 .. 5389488 + -4.2 -3.53811 CCTGAGATCAAACGC CT-GCCGGGCGGAAG AACCGA CTGCTGCCCGCCCAG TTTCACCCCCGTAAA 52 36 ST40_RS24675 5390209 .. 5390223 + -2.1 -3.59087 CAAAACCAGAAGACA G-GACG AACC CGTCAC TTTGGCAATGGTCTT 47 102 ST40_RS24680 NONE ST40_RS24685 5392436 .. 5392453 + -5.5 -3.04398 ACATCGAATTTCAAG ATCCTCC AGAT GGAGGAC ATTTTCCCGGAAGGA 50 96 ST40_RS24690 5393338 .. 5393363 + -5.4 -3.28712 ATTTCCCTGATAATT CGCGGC-CG TTTTCGTGC CGTGCCGCG TTATCGAAACACGAC 52 221 ST40_RS24695 5396228 .. 5396244 + -10.8 -5.01811 TCACGACCCCAAAAA GCGCCG CTCGC CGGCGC TTTTTCCTTTCGTGG 100 115 ST40_RS24725 NONE ST40_RS24730 NONE ST40_RS24735 5405284 .. 5405330 + -2.9 -4.99043 CTTGCCATCAGAAAC CAGCACGCGGCGCGCAAACAGCC AAA GGGA-TTTGCGCGCCCTG-GCTC TTTTGTTTGTCCCAA 76 146 ST40_RS24740 NONE bcsA NONE ST40_RS24750 NONE ST40_RS24755 NONE ST40_RS24760 5414624 .. 5414669 + -17 -2.72144 CCGCACGAGACCAGA AGCCCGGGCTCTTTTCCAGCT ATGCA AGCTG-AAGGGAGCCCGGGCC GTTTCCGGCCAATAG 91 57 ST40_RS24770 NONE hpaE NONE hpaD NONE hpaD NONE ST40_RS24790 NONE ST40_RS24795 NONE hpaH NONE hpaI 5423309 .. 5423339 + -10.5 -3.03124 CGTGAACGAAAAAGA GCCGCCAG-TCCATC TGA GG-GGACCTGGCGGC TCTTCAAACATGAGG 69 311 uxaC 5427371 .. 5427388 + -5.5 -3.53091 TGCCAAGCAGGCCTA TCGGCTC TGAC GAGCCAA TTTCGGGAGGAGACT 55 16 ST40_RS24830 5428443 .. 5428459 + -7.9 -4.59773 GACCGCGGAACGGCC CGGCTGG CTG CTGGCCG TTTTTCAGGATCCGC 83 84 ST40_RS24835 NONE ST40_RS24840 NONE ST40_RS24845 5430625 .. 5430635 + -2.4 -4.41348 ACACCTTCACGCCGC GCCG CGA CGAC TTTCTTTGAACACCG 62 6 kduI NONE kduD NONE ST40_RS24860 NONE uxuA 5434928 .. 5434964 + -8 -3.17901 GGATCGATAACGGTT TCGGAGCGGTTCAGCAG ATCC TTGTTGGCCCGC-CCGA TTGCCTTGCGCGTGT 57 104 ST40_RS24875 5437535 .. 5437563 + -11 -3.15544 CGGACCCGATGGTCC CGGACATCTCGT TTTGC GCGAGCTGTCCG TTGATCCGCCTGAGC 69 235 ST40_RS24885 NONE ST40_RS24890 NONE ST40_RS24895 5443102 .. 5443117 + -6 -3.05816 GCAAAAATCATCGAG GCGGCC CGGC GCCCGC TTCACTCAGCAGTCG 52 120 ST40_RS24900 5444585 .. 5444621 + -10.2 -4.0828 ATGATAGGCCGATAA GGGCCTTGAACCCGTCAG CTC CTGGCAGG--CAAGGCCC TTTCCTGTTTTGCCT 86 26 ST40_RS24910 5446853 .. 5446863 + -8.2 -2.73364 CCGCCGCCGAGTGAT GGGC ACT GCCC TGGTTGCGCTGGAAG 57 71 ST40_RS24930 5449722 .. 5449733 + -3.6 -2.75844 GTTTTCTCACAAATC GGCT GACC GGCC ATTTCCGGTCCAGGG 43 20 ST40_RS24935 NONE soxX NONE soxY 5451514 .. 5451527 + -3.7 -3.53012 GCGGCTTGTCCGCAG GACCG GCAC CGGCC TTTAGCCGAAACGCC 51 56 soxZ NONE soxA 5452928 .. 5452954 + -19.4 -4.53602 CTGACCGTTTAAACT CCGGCGCGGTCG CAG CCACCGCGCCGG TTTCTTTCCTGTCGC 100 42 soxB 5454801 .. 5454821 + -3.9 -2.62244 GCCGGACAACCAGTC CGTCAAGCT GGC AGGATGACG CCTTTTCTTCAGAGA 42 7 soxC NONE ST40_RS24970 NONE ST40_RS24975 5457834 .. 5457848 + -8.5 -4.78848 TTCGGCATGTAGCCC GCCGG AACGC CCGGC TTTTGTATTTCCGCA 90 96 ST40_RS24980 5458817 .. 5458843 + -4.5 -3.8377 CCAGCGAAAACGAGC GCGTCAGATCAGG GCG CC-GATCTGG-GC TTTGGTGTAGGGCTT 58 81 ST40_RS24990 5459703 .. 5459721 + -11.7 -5.13343 CAAAATCGTTGAAAA GCCGCCT TTTTC AGGCGGC TTTTATTTTGCCTTG 100 54 ST40_RS25015 5463323 .. 5463351 + -13.8 -3.63627 TGCAAGACGACAAAG GTCCGTCTGCCG CGAGA CGGCAGGCGGCC TTTGGCGTATGCACC 89 69 ST40_RS25020 5463930 .. 5463949 + -3.4 -3.9712 CCCCGAGCACTGACA AGGCGCCA TATT TGGCGGCA TTTGTCGTCAGCTCA 56 327 ST40_RS25030 5465882 .. 5465898 + -15.1 -3.13403 GCACTGATGGAAGAA GGCGGGC AGT GCCCGCC TCTTCCTCCCGCCAC 91 34 ST40_RS25040 NONE ST40_RS25045 5467881 .. 5467915 + -24.4 -3.53012 GACAGCTAACAATGA CCGGCAGGGTGCCATC GAC GATGGAACCCTGCCGG TTTGAGGGGGAACGG 100 134 ST40_RS25050 5469354 .. 5469371 + -8.3 -4.82819 GGGAAGGCACAAAAA AGGGCGC CGAA GCGCCCG TTTTGTTCTCGTGTC 90 136 ST40_RS25060 5469882 .. 5469899 + -2.6 -4.62069 GCCGGTCCGAAAAGC GCAGGC AAACTC GCCTGA TTTTTCGCGTCACGG 65 8 ST40_RS25065 5470983 .. 5471002 + -12.8 -5.81412 AAGACACCAAGGAAA CGGGTCGC TTCG GCGGCCCG TTTTTTTTGCGTGAC 100 53 ST40_RS25200 5504698 .. 5504715 + -3.3 -2.84687 CACCTGAGCAAATCG CCGCCAT GGCT GTAGCGG TCTCCTGATCCTTGC 41 0 ST40_RS25205 5506811 .. 5506823 + -7.7 -3.13522 GCCAAGTCGTTCCAC GGTGA GGT TCACC TGTTCATCCGCCAAT 57 90 ST40_RS25235 NONE ST40_RS25240 NONE ST40_RS25245 NONE ST40_RS25250 NONE ST40_RS25255 NONE ST40_RS25260 5518898 .. 5518911 + -9.5 -2.64735 ACCATCCTTCGAGAC GGCGC TTGC GCGCC TCCTCTGGATGAGGT 63 154 ST40_RS25265 NONE ST40_RS25270 5520641 .. 5520666 + -11.2 -5.79595 TATATGAATTTTAAA GGCTTTTCGC AGTGCA GCGAGAAGCC TTTTTTGTTTTAGGC 100 63 ST40_RS25275 5522087 .. 5522123 + -10.1 -3.11182 CAAGTAGAAGCCTTC GCGGACCGGCGGGTGC CTGCCC GT-CCCGCCGGTCTCC TCCTTTCTGTTCCGC 67 34 ST40_RS25280 NONE ST40_RS25285 NONE ST40_RS25290 NONE ST40_RS25295 NONE ST40_RS25300 5527189 .. 5527227 + -11.9 -2.91465 CCCGCTAGGAAACGA GGGATCACACTCGCGCCAC CGT GTG-CGCAA-TGTGATCCC ATTTGCCTTTCAATT 75 33 ST40_RS25305 5528177 .. 5528187 + -4.6 -3.14132 TGCTTGATGTCGAGA CTGG AGA CCGG TTCGTCCAGGAACAA 48 331 ST40_RS25330 5534282 .. 5534309 + -18.4 -3.53761 AGTTCTGACCCATGA CCCGCCGCCTGT CCCC GCGGGCGGCGGG TTTCAAGCCCGGTTG 100 33 ST40_RS25335 NONE ST40_RS25340 5536557 .. 5536586 + -15.7 -4.56775 AACATCCTGACCTGG CGGGCCGGAACAC ATTG GCGTTCCGGCCTG TTTTTCCGAAGGCAT 100 39 ST40_RS25345 NONE ST40_RS25350 NONE ST40_RS25355 NONE ST40_RS25360 5540384 .. 5540406 + -5.6 -2.86343 GACCAGTGTGTAGTC GGA-CGGCA GCACGA TGCCGATCC TGTCGTCGTTCAGCT 48 357 ST40_RS25380 5544426 .. 5544454 + -14.6 -4.56775 GCCGTCAGTTTGACT GGAGGGGGCGCA GTCCA TGTGCCCCCTTC TTTTTCAGGACGCGT 100 45 ST40_RS25385 NONE ST40_RS25390 5546692 .. 5546716 + -12.2 -5.95539 CGCAAGAAACGAAAA CGCCCTC-TCC TTCC GGATGAGGGCG TTTTTTTGTTTGCGG 100 54 ST40_RS25405 5550349 .. 5550364 + -6 -2.63596 CTGGATCCAGAAAGA GCGGGC TTCT GCGCGC TGATCTGCAATCCAG 49 7 ST40_RS25410 5551863 .. 5551891 + -10.9 -3.14132 TTCATCTTGTGCGTG TTGAGGGGGGCGC AGA GCCCCTCCCTCAC TTCCTACGGAGACCC 69 119 hutI NONE hutH NONE hutG NONE ST40_RS25450 5561340 .. 5561367 + -12.9 -2.55351 AATGCAATCAACTTT CTGCTTTCATG GTCCAA CATGAAAGCAG GTTGATATCGGGGAA 75 70 ST40_RS25455 5562545 .. 5562586 + -19 -4.39426 GACTGATCGGGTTGA CGTC-TCACATCGGGGAAA TCTGT TTTCCCCGATGTGATGGCG TTTTATCGCCCTGTC 100 35 ST40_RS25460 NONE ST40_RS25465 5565084 .. 5565106 + -10.6 -5.29782 GATCTACCTAAAAAA GCCACAGC ACCTTCC GCTGTGGC TTTTTTGTGCGTGTC 100 71 ST40_RS25470 5565894 .. 5565906 + -3.3 -2.71712 CTGCGAGGGCCGCCT ATGCG TGA CGCAG CTTTCGACACACCAG 41 18 ST40_RS25475 NONE ST40_RS25480 5567629 .. 5567654 + -15.5 -5.78622 ACTCCGCTCAAACCT TCCCCCTTCTC ACGC GAGGAGGGGGA TTTTTTTTGACCTGC 100 103 ST40_RS25525 5578817 .. 5578850 + -6 -3.57144 ACCGTGAAAGCGGGA TGCGGATTGAGG GCAAAAAACG CCTCGAACCGCA TTTGCCAGTCGGAGA 57 205 ST40_RS25535 NONE ST40_RS25540 NONE ST40_RS25545 NONE ST40_RS25550 5582134 .. 5582147 + -2.3 -4.57516 GTGCGTTTCGCGCAT CATGC ATAT GCTTG TTTTGATTTCAGTAT 65 164 ST40_RS25555 5583856 .. 5583870 + -7.8 -3.32268 TGACTTCGCCGCCAG CCGTGT TCA GCACGG TTCTGACGATGCTTG 59 122 ST40_RS25565 5585880 .. 5585902 + -10.7 -3.30124 TGAACCGGGCATCAT GGCTCTTTT GTTCG AAAAGAGCC TTGTCGACCGTCCGC 68 494 ST40_RS25575 5587928 .. 5587948 + -6.7 -2.71144 CGCGGCACACCGCCC CGGCTTGGC TAC GCTTGGCCG TGATTGCGAAAGATG 52 202 ST40_RS25615 5597572 .. 5597586 + -10 -2.78596 GATCGGTTCGCTCGC GGTGAG CGA CTCACC TATACTCGCCCCATC 64 77 ST40_RS25620 NONE ST40_RS25625 5599792 .. 5599806 + -2.8 -3.06796 GGTTCCGCCTGCAAA TGAAGG AGA TCTTCG TTGACTGACCTCAGG 43 3 ST40_RS25630 NONE ST40_RS25635 NONE ST40_RS25640 NONE ST40_RS25645 NONE ST40_RS25650 5604232 .. 5604246 + -11.4 -2.63715 AACCCGGCCATCAGC CGCGCT GCG AGCGCG TCCTCTCAAGTCCCT 68 114 ST40_RS25750 5625803 .. 5625824 + -11.5 -3.70811 TTCAAAAAAGAAAAA GGCGCAGCC CGGA GACTGCGCC TTTCGCATTGTGTAG 79 202 ST40_RS25770 NONE ST40_RS25775 5635600 .. 5635616 + -3.5 -2.54523 TTTCACCCGACACGC CCGACGC GAG GCGCCCG TGCATTACGATGTAA 42 52 ST40_RS25780 5636563 .. 5636575 + -4.8 -3.68351 ATATCCCCGGCTGAG CAGG GCGAA CCTG TTTCCATCATCGCCG 55 97 ST40_RS25785 5638065 .. 5638088 + -8.9 -3.53563 TGCTCTGCCGGAACT GAACCCG-CC GAAAA GGACGGGTTC TTTCCGACAGACTGT 68 24 ST40_RS25835 5649861 .. 5649876 + -4.6 -3.53444 CCCCGGAACAGACAC CGGTAC CTCC GCACCG TTTCCGGCAAGCTGC 52 362 hemA 5655109 .. 5655131 + -15.6 -5.80003 ACAGATCAGACAAAA CCCGCTTTCC GAT GGAAGGCGGG TTTTTTGTTTCTTCG 100 54 ST40_RS25870 NONE ST40_RS25875 5657742 .. 5657768 + -2.8 -3.53012 AGGCCATGCCGCCCA TGCGGCCGGAAG TGC CTGCCGACTGAA TTTCGACCAACCCAA 49 0 ST40_RS25880 5659425 .. 5659443 + -3.1 -3.53012 TGCCTATGGCGGCAT CG-CGTGA CCGA TCGCGACG TTTAAGGGAGGAAGA 49 19 ST40_RS25885 5661432 .. 5661468 + -4.3 -4.07568 TACCGATGCGGATCT GGTGTGATGGAAACCGT GAC AAGGTCTCAATCGCTCC TTTTACGCGGCAAGG 62 19 ST40_RS25890 NONE ST40_RS25895 NONE ST40_RS25900 NONE ST40_RS25905 NONE ST40_RS25910 5664161 .. 5664182 + -5.1 -3.33315 TCAGCCCTTCACCAG GTTCCGCAG CAGG CTGTTGAAC TTGTCCGGCTCTTCC 53 84 ST40_RS25955 5673852 .. 5673877 + -16.9 -3.68378 TGCCTTCGCATGACC GGACAGGGGGC AACC GCTCCCTGTCC TCTTTTCCGGTATAC 100 45 ST40_RS25960 NONE ST40_RS25965 NONE ST40_RS25970 NONE ST40_RS25975 NONE ST40_RS25980 NONE ST40_RS25985 NONE ST40_RS25990 5681029 .. 5681049 + -2.3 -3.54424 GTTCAGTGGACCTTT GAAGGGTCC TCA GGCCCCGCC TTTGCAGGGATGACA 47 97 ST40_RS25995 5683396 .. 5683409 + -5.2 -3.01712 CCGCACGAACGGTTT CGGC AAAGCG GCCG TCTTCCAGAACGGCA 46 387 ST40_RS26025 5690170 .. 5690187 + -3.3 -3.28712 GCGGGTGGGATTGTT CGAGG-CC CGC GGTCCACG TTCTGGGAGGAACAC 45 137 ST40_RS26030 5691177 .. 5691194 + -12.7 -2.53263 GCGCGGCCCTGTGGA GAGGCGG CCTT CCGCCTC TCCCTTGCAACTGAC 75 57 ST40_RS26035 NONE ST40_RS26040 NONE iolC NONE iolD 5697171 .. 5697182 + -7.2 -3.15544 CCATCCTTCGAGACA GCGC TGAA GCGC TTCCTCAGGATGAGG 57 148 iolE NONE iolB 5699139 .. 5699156 + -14.1 -4.58773 GTTATCGTCAAAAAA GGGCGCC AAAA GGCGCCC TTTTCGTTTCCTGAG 100 218 ST40_RS26100 5710049 .. 5710068 + -15 -3.83324 GCCAGGGATCCTGAA GGCCTGCC GCCC GGCAGGCC TTTGCCTGTTTGTCA 100 93 ST40_RS26105 NONE ST40_RS26110 NONE ST40_RS26115 NONE ST40_RS26120 5713231 .. 5713241 + -6.8 -3.37589 GAAAGGAGGAGATAC GTCC GCT GGAC TTCTGCCGGTTTTTC 58 91 ST40_RS26135 5715575 .. 5715595 + -3.2 -3.48276 GATACCCGGGATCTT GGCAATGA AAGCA TCGTGGCC TTCTCTCGGCGCGAA 49 278 ST40_RS26160 5722004 .. 5722052 + -2.3 -2.82516 AACCCCTCGATCTCC GCTTCCAGACGCAGATTGCCG CTCGCCT TGGCCATCAGCCTGTGGAACC TGTCATCGTGAACGG 39 246 ST40_RS26170 5725254 .. 5725266 + -6.3 -3.15427 GACGCCAAACAAAGA TTACC CTA GGTAA TTACTGAAAACTCTT 52 113 ST40_RS26175 5726869 .. 5726887 + -10.2 -5.30155 CCGGCAACACAAAAA GCGGGCGT AAC AAGCCCGC TTTTTTCATTCCTGC 100 41 ST40_RS26185 NONE ST40_RS26190 NONE ST40_RS26195 5738316 .. 5738336 + -14 -5.29445 TCCGGAAATCCTGAA GCCCCGGA AACAC TCCGGGGC TTTTTCTTCTTGCAG 100 51 ST40_RS26220 NONE ST40_RS26225 5744305 .. 5744318 + -2.3 -3.73402 CGACAACCGTTTCGT CTCCT TCAA AGGTG TTTCATGACCGATCT 50 93 ST40_RS26230 5745228 .. 5745253 + -14.7 -3.38726 ACGCAAAGCCGCAAT GACGCCCAGGC GAAA GCCTGAGCGTC TGATTTTTTGGCCTC 95 112 ST40_RS26245 5748810 .. 5748822 + -3.4 -2.69151 AGGCGATTTTCATCC GCAA CCCTT TTGC TGCTCTGTGCAAAGG 40 178 ST40_RS26250 5749853 .. 5749876 + -13.8 -5.15969 TCCTTTCGACAACGG GCAGCGTGGC GGAA GCCTCGCTGC TTTTTTCCGTTCCCC 100 51 ST40_RS26255 5752047 .. 5752083 + -10.1 -3.44848 TTGCGAGCACCAGAT GTTCCGGCCTGAGCAAC AAT GTTGCTGGGCCCGAAAC TGTTTGGTCAGGACA 70 291 ST40_RS26270 5755680 .. 5755697 + -3.3 -3.49924 AGGCGAAAGGCCGAG GGCGG-CG CCC CGACCGAC TTCTGATCATTTCAC 49 2 ST40_RS26275 5758387 .. 5758403 + -8.7 -3.25823 GACGGGCCTCCGGCC CTCCTCA GGA TGAGGGG TTGGTGTAGGGAACG 65 207 ST40_RS29735 5760641 .. 5760666 + -11.1 -4.29326 AGACAGTTTCGAAAA GCCGTGAATGC CAAG GCGTTCTCGGC TTTGTTGCGTTTCAG 93 191 ST40_RS26300 5763912 .. 5763933 + -2.2 -3.87364 AAGCTCGTTCTCGGT GCTCGGGT AATTTC ACTCAAGC TTCTGTTCTTCTGAG 52 16 ST40_RS26305 5765642 .. 5765652 + -8.2 -2.71924 TCAGACATCTCCCCC GCGG CAA CCGC CTTTAAAAGGCGATC 53 217 ST40_RS26315 5768935 .. 5768985 + -11.8 -3.13504 GATGAACAAGAAGAA ATGACGGACTGATCCAGCGGCGTT ATC AGCGCCGCTGGATCAACCTGCTAC TGGTTTTCGTAACAG 76 22 ST40_RS26325 5770878 .. 5770888 + -2.4 -3.44672 AGCCGATGTCAGCTT CGAG AAA CACG TGTCTTTTCCTCCGG 45 44 ST40_RS26330 5771533 .. 5771544 + -3.6 -3.64703 GGCGGCCTTCGGGTC GCCG CAAC TGGC TTTGGCTCAGAACCG 53 50 ST40_RS26340 5773808 .. 5773822 + -9.2 -3.01712 ACGTCCCGATCAGCG CTGCCG GCG CGGCGG TGTTGAACGGCACCC 60 201 ST40_RS26395 5788010 .. 5788024 + -10 -2.60075 GCGGCAATGTAGCGA CAACGC GCA GCGTTG CTTCGTTCCAACCAA 63 29 ST40_RS26415 5791592 .. 5791610 + -17.4 -5.29445 GTTGACGTTTTAAAA GCCCCGGC ACT GCCGGGGC TTTTTGTTGTTGAGG 100 54 ST40_RS26465 5802496 .. 5802512 + -5.8 -2.83012 ACGCAGGACACTTGG CGGCAG GGCTA CTGTCG TCTAATGATGGAGTT 50 98 ST40_RS26470 5803871 .. 5803895 + -6.4 -2.79796 AAGAAAGATGTGGCT TGATCTGAGC AGGTC GCTCCGGTCA TCTAGTCCGATGGAC 50 23 ST40_RS26475 5804908 .. 5804922 + -4.2 -3.35597 AAATGGCACGCCCAA CGGG ACTCGAA CCCG TGTTTCCGCCGTGAA 51 129 ST40_RS26490 NONE rpoH 5807574 .. 5807607 + -18.3 -4.86621 ACCTGGAAAAAACAG AAAAAGCGCTGGAGC CCAG GCTCCAGCGCTTTTC TTTTTGCTTGAAAGT 100 50 ST40_RS26525 5816135 .. 5816160 + -8.9 -2.58544 ACCGGATAGCGGATC AGCGGGCGTTC CGTC GAACGCCAGCC ATTCTAGAAATGCAG 59 155 ST40_RS26620 5837636 .. 5837646 + -6.8 -3.97511 CTTCACGGACATCTG CCAG CGT CTGG TTCTTGTATTCGCTG 65 406 ST40_RS26660 NONE tkt 5843673 .. 5843685 + -7.7 -4.69027 GTGCTTTTCAAGTGA CCACA CTA TGTGG TTTTTAAATCGGTTT 86 102 gap 5844768 .. 5844788 + -14 -5.29782 TCCCTGCCTTCGAAA GACGCCGG TTCAT CCGGCGTC TTTTTTGTCGGTATG 100 42 ST40_RS26675 5845083 .. 5845096 + -2.4 -2.50935 CTTGCGAAAGCCGGA TTCC CCGGCT GGAA ATTCCTGAGTCCAAT 38 4 ST40_RS26680 NONE ST40_RS26685 5845956 .. 5845973 + -3.3 -2.72144 TCCACCAACTCCAGC CGTCCCT GAAG ACGGGCG ATTTCCAACAGGTAA 41 17 ST40_RS26690 NONE ST40_RS26695 5847585 .. 5847607 + -10.4 -2.70979 GCCGGTTTAAAACTC GCCGGGCGGC GGT GCCGACCGCC TCAATTTAATTCGAA 66 31 fba 5848925 .. 5848943 + -8.1 -3.62518 TTCACTTTATTGAAA GAGGGGC CTTGC GTCCCTC TTTCGCCGTCTTTAG 68 69 ST40_RS26705 5849699 .. 5849715 + -2.9 -3.14931 AAACTTCACGCCCCT TTCTGCT TGC GGCAGGG TTGCTGGCAGCTGGA 0 85 ST40_RS26655 NONE ST40_RS26650 5840383 .. 5840397 - -4.2 -2.72344 GGGCAGCCGCAAGTA CCGCAT ATA ATCCGG TGCGACGGCAATTAC 45 116 ssrS 5840225 .. 5840238 - -3.7 -4.19735 GTCCTGAAAAGGAAA CGCGC AGCC GCCCG ACCGTTGGATTTGCA 60 12 ST40_RS26640 NONE ST40_RS26635 5838702 .. 5838728 - -5 -3.06515 GTTGACCCGGAAAAT CCAGCGCAGAGA AAT TCTCGGCCGTGG TCAGGCCCCGTTCGG 50 26 ST40_RS26630 5837835 .. 5837863 - -16.1 -4.32034 TCAGGACCACCAAAA CAAAAACCCCGGC AGG GCCGGGGTTTTCA GATTCATATCCTGTG 100 45 ST40_RS26625 5837462 .. 5837487 - -4.7 -4.57341 AACCCGCCCCAAAAA CGCGGCGCAAAC CTT ACTTAC-CCGCG CTTTCCTGCAGCTTC 71 13 ruvC 5835793 .. 5835810 - -6.3 -2.78463 AGCTTGCCGATCATA TTGCC-CC CAT GGCGGCAA GCCGCGCTGTACTGT 50 3 ruvA NONE ST40_RS26605 NONE ruvB 5833872 .. 5833886 - -5 -2.56095 GCTAGATGTAACTGA CAAGAC CTT GTCTTA TAAATACTACTTAAA 46 41 ST40_RS26595 5831621 .. 5831646 - -20.5 -4.87893 AAGCTGAATGAAAAA GCCTCCCGGTC GACC GACCGGGAGGC TCGTACCTGGCCCTT 100 55 ybgC 5831008 .. 5831020 - -4.1 -3.90291 ACTTTTCCAATCAAA GAAAG TCC CTCTC TAAAGGAATCAATTA 56 129 tolQ NONE tolR NONE ST40_RS26575 NONE tolB 5827316 .. 5827335 - -11.4 -3.12936 AGCGAAAGCTTAACA CGGCCTGC CTTC ACAGGCCG CATGTCTCCATCAGT 72 36 pal 5826666 .. 5826686 - -18.3 -5.46657 CAGCCCAACAAAAAA GGCCGGGCA AGC TGCCCGGCC TTTTTGTTCGGCATT 100 48 ybgF NONE tilS 5824065 .. 5824084 - -2.8 -3.54129 GATAGGTCGCCCAAA GC-CCGC TGCCAAG GCGGTGC GCCATAGTTGCGCAG 49 100 ftsH 5822020 .. 5822043 - -18.2 -3.53031 TTCACCGCAAACGAA GATGCCCGGC GCAG GCCGGGCATC TGGGTTGTTCAGAAT 100 52 glmM 5820494 .. 5820512 - -8.8 -5.7946 GGCGTAACAAAAAAA GCCGCC TCACATG GGCGGC TTTTCTTATCACTTG 100 53 ST40_RS26540 5819240 .. 5819259 - -15 -4.49756 GCGCAAACAGGAAAA GGCCGGTC GATT GACCGGCC TTTCAAATTCGCTGA 100 49 ST40_RS26535 5817777 .. 5817805 - -5.2 -4.06384 CTTGAATACGAGAAA CGAT-CCGGGCAG CGCA CCGCCCGGGACTG TTGTCGTTGAAGGAT 63 49 serA 5816022 .. 5816050 - -13.2 -5.00616 CGGTTCGGGAAAAAA GGAGCCTTCTGC AAAAG GCAGAAGGCTCA AGCGCCAGGAACTTG 100 139 ST40_RS26520 5813304 .. 5813325 - -10.8 -3.52073 GCGCCAACACGACAA GCCCCGGC AACCGG ACCGGGGC AAACGGCGCGGACTA 74 220 ST40_RS26515 5811875 .. 5811909 - -14.2 -3.11359 CGCCGAAAACGAAAG GTGGTTGCGTGCGGTG ATT CGCAGCACGCAACCGC AGTCCTTAATAATGT 91 60 ST40_RS26510 5809858 .. 5809873 - -11.8 -3.46102 GACGGAAAAAGGCAA GCCGCC GTGA GGCGGC TTCTTCAGATTTTGA 80 59 ST40_RS26505 5808809 .. 5808831 - -4.7 -3.53224 GAGGTCCTCCGTAAA GCGGCAGCT AGGTG AGCGGCTGC CAGGGAACAAGAAGT 52 10 ST40_RS26500 5807579 .. 5807602 - -18.2 -5.41787 GAAAAAACAGAAAAA GCGCTGGAGC CCAG GCTCCAGCGC TTTTCTTTTTGCTTG 100 275 ST40_RS26485 5805081 .. 5805099 - -10.2 -3.28924 CATGCCTGTTCATAA CCGCGCGC GAT ACGCGCGA CGCTACGTCAGCGCG 71 33 ST40_RS26480 5804850 .. 5804863 - -4.5 -3.30635 CAAACGGGTGGAGAA CCCTG TGCG CAGGA TGTGGATATGCTGTT 49 58 ST40_RS26460 5801095 .. 5801107 - -4.7 -2.9518 TGCAAGAGTTACACA TCCGC ACA GCGGC TGCCAAGGCAGCGGC 46 127 ST40_RS26455 5800291 .. 5800312 - -4.4 -3.08046 TCCGCATCCCAAAAG GGACGTCT GGACCG AGAAGTCC ATGAGAGCTAGGTTG 47 94 ST40_RS26450 NONE ST40_RS26445 5796943 .. 5796957 - -3.4 -3.07994 CGTAACTCCACTCAA TGGCCA TTG CGGCCC AGTTATGCTGCAGCC 43 28 ST40_RS26440 NONE ST40_RS26435 NONE ST40_RS26430 5794359 .. 5794375 - -15.1 -4.88407 GCAGCGAATGAAAAA GGCGGCC AGA GGCCGCC TTTGAACTTGATCCG 100 77 ST40_RS26425 5793095 .. 5793126 - -15.2 -4.07687 ACTGTCCGGCGAAAA CAAAAAAGCCGGCG TTGC CGCCGGCCTTTCCG CACTTGCAATGGCAG 100 43 ST40_RS26420 5791592 .. 5791610 - -17.4 -4.09685 GTTGACGTTTTAAAA GCCCCGGC ACT GCCGGGGC TTTTTGTTGTTGAGG 100 62 fliI 5789154 .. 5789171 - -2.6 -3.10796 TTTCATTACTCAATA CTCCCC TAACAC GGGCAG TCTACCCCTGAGTCA 42 27 fliJ 5788636 .. 5788661 - -9.7 -4.61566 TCGGAAAGCACAAAA CCTGACCGCCG CGAG CAACGATCAGG AATATAAGAACGTAT 91 101 ST40_RS26400 5787785 .. 5787804 - -5.6 -3.88137 AGAACCGCGGAGAAA GCCGGCCT CGAC ACGCCGAC CTTCGCCCTTTTCGC 62 315 ST40_RS26390 5784219 .. 5784249 - -13.3 -3.56155 CACCAAGACGAAACA CCCCGGCAAGAAGC TCGC GCCTCC-GCCGGGG TTAAATAGACCACTC 89 65 glpD 5782554 .. 5782572 - -16 -4.25104 TTCTTGTCATGAAAA CTGCCGGC AAG GCCGGCAG GTCATCTGGTTCCGT 100 50 glpK 5780995 .. 5781016 - -13.7 -5.07652 CGCCTGAAAACAAAA GGCTCCCGC AACA ACGGGAGCC CCTGAATTTCTCAAT 100 36 ST40_RS26375 5779075 .. 5779111 - -7.2 -2.57132 TCCGCCGGCCAGAAT GTCCGAAGGCGCCGGCA TTGC TGCCAGCGCCCTCTT-C GAGTTAGGCGGATTT 54 39 ST40_RS26370 NONE ST40_RS26365 NONE ST40_RS26360 5776221 .. 5776235 - -2 -2.93572 AGCCATCTCAGAAAC CTCCCG CTT CGGCAA AGTCGCTCACCGTCG 40 3 ST40_RS26355 5775323 .. 5775350 - -15.6 -4.56914 TGACCGAAAGCAAAA GACCCCCGCTCC GGAA AGAGCGAGGGTC TTGTTTTCAGCGTCT 100 56 ST40_RS26350 5774777 .. 5774818 - -4.3 -3.06133 GAACCGGTCACGCAA CTTGTCTTGCTGCCGAAAG GAAC CTTCCGGCATCCAGGCATA TCTGTTTCCTGAATG 47 41 arsB 5773428 .. 5773456 - -6 -3.73775 CCCATTTGCAGCAAA GGCTCTGGCCCCT TTGC AGACGC-AGAGCC GCCGGTTCTGGTACC 60 198 ST40_RS26335 5771516 .. 5771537 - -12.9 -3.83205 AGCCCTGACAGGAAA GCGGCGGCC TTCG GGTCGCCGC AACTGGCTTTGGCTC 90 39 ST40_RS26320 5768936 .. 5768984 - -15.3 -4.58786 ATGAACAAGAAGAAA TGACGGACTGATCCAGCGGCGTT ATC AGCGCCGCTGGATCAACCTGCTA CTGGTTTTCGTAACA 100 23 ST40_RS26310 5764924 .. 5764941 - -7.7 -3.55071 GCACATTCGGCGAAA GCCGGGTG ATC CACC-GGC GTGACATCGACAAGG 62 518 ST40_RS26295 5761386 .. 5761400 - -4.2 -3.07344 CCACCGGTCAAGACA CCGC CTTTTCC GCGG CAGGAAATCCGCTGG 47 3 ST40_RS26290 5760408 .. 5760441 - -6.8 -2.69799 TCAGCGGACACACCA CGGCAGAG-CTGGCTC GTAT GAACCAGGCCCTGC-G CCAGCGCGAAGCTCA 50 138 ST40_RS26285 NONE ST40_RS26280 5758319 .. 5758377 - -24.1 -2.74792 TGAGGAGGTGCAAAG CGCCGTCTCGAAGGATGGGCAGCATACT CGGG AACAAGCGGCCCATCCTTCGAGACGG-G CCTCCGGCCCTCCTC 100 493 ST40_RS26265 5752879 .. 5752905 - -2.2 -2.75268 GAAGGACTTGGAAAC GGAAGCAAGC TGGATGG ACATGCCTCC CGTTAGCCTTCTCCC 39 75 ST40_RS26260 5751653 .. 5751682 - -8.5 -3.27476 ATCTTCAACTACGAA GACGGCGGCTACAC TAC GCTT-GCCGCCGCC ATGTCGGTTGTGGTC 59 196 ST40_RS26240 5746747 .. 5746760 - -4.5 -2.60763 GTGATAGCCGACAAG CTGCC CAAC GGCAA TGTCTGGTTGGGGCA 44 59 gndA 5745230 .. 5745251 - -13.7 -2.74514 GCAAAGCCGCAATGA CGCCCAGGC GAAA GCCTGAGCG TCTGATTTTTTGGCC 79 41 ST40_RS26215 5741642 .. 5741678 - -3.6 -3.90744 TCTTGCTCGAAATAA GCCTGACCGCCGTCTC TACTT GAGAAGAAGGTCATAC TCGGTATTTGTACCG 56 264 ST40_RS26210 5740399 .. 5740431 - -4.5 -2.71712 GTTTTTGCCCCAAAT GGTTGGGGCCGCACC ATT GGAGCGGCCCCTGTT GTTTCTTTTGCCTGT 45 40 ST40_RS26205 NONE ST40_RS26200 5738408 .. 5738427 - -15 -5.39721 CCAGGATACAAAAAA CCCCGGAG CGAA CTCCGGGG TTTTGATGCTTTCAC 100 52 ST40_RS26180 5726869 .. 5726887 - -10.2 -5.0916 CCGGCAACACAAAAA GCGGGCGT AAC AAGCCCGC TTTTTTCATTCCTGC 100 44 ST40_RS26165 5721461 .. 5721472 - -3.6 -4.13014 TGGAGATGCTGAAAA GCGA CAAT CCGC CGACCGCCTTCCTGA 59 337 ST40_RS26155 5719086 .. 5719113 - -17 -3.7941 GATCCGTCAGAAGAA CGGCCAGCCTCC CTGG GGAGACCGGCCG CCTGAAGGATTACTT 100 35 ST40_RS26150 NONE ST40_RS26145 NONE ugpC 5715292 .. 5715318 - -4.4 -4.23045 CAACCAGTCAACAAA TCCTCAAATTCC TGA AGAGCCTGAGGA GTAAGGGTCTCCTCC 66 171 ST40_RS26130 NONE ST40_RS26125 5713194 .. 5713215 - -5.1 -3.93136 AGAGGCAGGGATAAA TACAGGTGA GCGC CCACCCGCA GAAAGGAGGAGATAC 63 329 ST40_RS26095 NONE ST40_RS26090 5706090 .. 5706105 - -4.6 -4.11484 CCTAAGGTTCGAAAA TCCGCA GGTC TGCGGT CGGTCTACGCGGGCG 62 52 ST40_RS26085 5704685 .. 5704719 - -2.9 -4.1021 CCCGATAAGGAGAAA CACCCGACCTAA-AGCA AAT TGCGGTTAGGAC-GGTG AAAGGTCTGGGGAAC 58 87 ST40_RS26080 NONE ST40_RS26075 5702862 .. 5702881 - -4.2 -2.60032 CCTGCCTTAAAAAGT GGCACAAA GGTC TATGCGCC TTGCCAAAGCGGTTT 44 96 ST40_RS26070 5701739 .. 5701755 - -5.1 -3.94402 ATAATCGCGAAAGAA TTCGGAG CCG CTCCTAA ATCATACTGTCAATA 63 119 ST40_RS26065 5699139 .. 5699156 - -14.1 -5.03314 GTTATCGTCAAAAAA GGGCGCC AAAA GGCGCCC TTTTCGTTTCCTGAG 100 50 iolG 5687929 .. 5687942 - -8.1 -3.16564 CCCGGAGGTGACGAA GCGGA CCGT TCCGC CCTTTAACCTCATCC 62 159 ST40_RS26015 5686691 .. 5686722 - -21.7 -4.2074 TCCGCAACAGATAAA GGGCGCGAACAGG AACCGG CCTGTTCGCGCCC ATTGAACAATAAAGT 100 70 ST40_RS26010 NONE ST40_RS26005 5684013 .. 5684028 - -3.2 -4.09685 TGCCAGCCGGGAAAA GGCAGT GGTT ACCACC GGGAAACCTCATTCT 58 70 ST40_RS26000 5682888 .. 5682899 - -3.6 -3.61517 ATGCTGTGCGAAGAA GCCG GGAT CGAC ACGATCGACATTGCC 51 367 ST40_RS25950 NONE ugpC 5670465 .. 5670479 - -12.8 -2.86164 TTTCGAACGAGGAGA CGCGCC AAA GGCGCG GCTGATATCCGGATT 79 123 ST40_RS25940 NONE ST40_RS25935 NONE ST40_RS25930 NONE ST40_RS25925 NONE ST40_RS25920 NONE ST40_RS25915 5664108 .. 5664122 - -5.6 -3.98282 CGGACACTAAGGAAA CGGTCA GGA TGGCCG TCCCAAAAAGCCAAG 63 49 ST40_RS25860 5652759 .. 5652775 - -6.5 -2.70932 TTTCTGTCTCAACGA GGCCCAT GAC ATGCGCC TCAGGGTTTGATGCC 52 26 ST40_RS25855 5651908 .. 5651940 - -5.5 -3.01712 TGCGTCCTCCCAACA CCTGGCGGGGC-CT CGAGCC AGCGCCCTGCAAGG CGAGGTGTCCGTCTT 50 77 ST40_RS25850 NONE ST40_RS25845 NONE ST40_RS25840 5649188 .. 5649213 - -3.9 -4.14392 CCGCAACCCGGAAAA CCCCGACCACC TGAT GGTGATTAAGG ACGTGCCCCGGCGAA 62 403 ST40_RS25830 NONE ST40_RS25825 NONE rbsD 5645905 .. 5645930 - -5.3 -5.45802 TTCGGAAAACAAAAA TGGGAGGAGCA TTTC CACTCCCCCCT CGCGTCGGTCAGTTC 100 91 ST40_RS25815 NONE ST40_RS25810 5643157 .. 5643179 - -11.2 -2.72991 GGAGATTGGGAAGGA CCGGGCCTCC GAT AGACGCCCGG TCCGGGCTGTTATGT 69 87 ST40_RS25805 NONE ST40_RS25800 NONE ST40_RS25795 NONE ST40_RS25790 5637913 .. 5637925 - -3.3 -4.08216 TGACCTGCCGGAAAA CGTGA ATT TCGCG GTCAGGGGCAAGCTG 59 205 ST40_RS25765 5628075 .. 5628094 - -2.8 -4.48317 CGAGAAAAGAAACAA CAGCTG TCCCCTTC CAGCCG GCACGCCGGTCAACT 64 35 kynA 5627062 .. 5627072 - -4.6 -3.87815 CTCTATCGGCACAAA CGCC GAT GGCA AACATGCAATTCGTC 58 66 ST40_RS25755 5625797 .. 5625830 - -13.9 -5.06451 CACGATTTCAAAAAA GAAAAAGGCGCAGCC CGGA GACTGCGCCTTTCGC ATTGTGTAGAGAAAC 100 51 ST40_RS25745 5622242 .. 5622256 - -2.1 -2.89564 CCTGCATGGCAGACA CGATGC CCTT GCA-CG TCGCGCTCAGGTTTA 40 38 ST40_RS25740 NONE ST40_RS25735 NONE ST40_RS25730 NONE ST40_RS25725 5618258 .. 5618269 - -5.8 -2.83641 CAACCGAGCATCATA CCCT CCCC AGGG CAAAGCCCTTGGCAA 50 9 ST40_RS25720 5617944 .. 5617962 - -17.4 -3.76402 ACCTGATGGACGAAA CGCGCGGG AAA CCCGCGCG CCTCTATTCACGTCA 100 38 ST40_RS25715 NONE ST40_RS25710 5616198 .. 5616231 - -10.9 -2.64422 ACAGAGGGGATATGA TCCTGCTCCGGACGA CCTT CCGCCCGGAGCAGTT TTGGATCACTCAGCG 66 35 hypF 5613543 .. 5613562 - -2.1 -4.09739 TCAACCTGCTTAAAA TCGGG GCAGATGGAA CCCGA TGGCCTATCAGTCGA 56 88 ST40_RS25700 NONE ST40_RS25695 NONE ST40_RS25690 NONE ST40_RS25685 5608465 .. 5608489 - -4.3 -3.42078 CATATCCGATCAGAA GCATGAAGA CGTCCTC TCTTCAGGC AGATGAAATGTTGCC 51 225 ST40_RS25680 NONE hypA NONE hypB NONE ST40_RS25665 NONE hypD NONE hypE 5604194 .. 5604205 - -7.2 -3.21218 ATTCCGGACCAGGAA GGCG CAGC CGCC CGCAGATCCGGAACC 59 211 ST40_RS25610 NONE ST40_RS25605 NONE ST40_RS25600 NONE ST40_RS25595 5592532 .. 5592563 - -15.9 -2.74322 TTTAATTCCGGAAAT TCCCGGTCCGGAG GTATCG CTCCGGACCGGCA GATCTGACCGTGCCT 86 70 ST40_RS25590 5590965 .. 5590994 - -9.3 -2.62184 TCTTGTTTTACAGCA CCCGC-CTCCCTCA TCC TGAGGAAGCGCGCG AGCGCTGTCTCGAAG 59 148 ST40_RS25585 5589406 .. 5589427 - -11.6 -2.87132 CTGCTTGCGGAGACA TCTCCCCC TCAAGG GGGGGAGA GGGGAGCAAGCTCAA 71 101 ST40_RS25580 5587982 .. 5588004 - -20.6 -6.20267 TGAAAAACAAAAAAA GGCGCACCGG TAT CCGGTGCGCC TTCGAGGTCAAGGGG 100 48 ST40_RS25570 5585425 .. 5585464 - -10.6 -2.63301 GACACCTTGAGACGA CCGGCAGCCTCCCACCCT CGAA AGCACGGGAGGCTGCAGT CCAGATGAGCAAAAA 66 67 ST40_RS25560 5583427 .. 5583471 - -4.8 -3.83026 GGCTTCTACACCAAA CGTGGCAGCA-CTGTCGGTCA GGAC CGCCCGGCAGATGCCGGCCCG ACGCCTCCGCAAGAC 57 336 ST40_RS25530 5578244 .. 5578273 - -4.9 -4.4078 CGCCCTGAAGGAAAA TCCCG-ATGCGCCG CAG CTGCGCTTTCAGGA GGATGCCTGCCTGCA 68 406 ST40_RS25520 NONE ST40_RS25515 5575157 .. 5575169 - -2.6 -2.57132 TTCCCTCGCCACAAC GGCC ATTCG AGCC TTTTCCTCCCACACA 38 82 ST40_RS25510 NONE ST40_RS25505 NONE ST40_RS25500 NONE fdh3B 5570580 .. 5570605 - -21.9 -2.65271 TACAACCGGAGACGA GCGGGGCGGCT GTAA AGCCGCCCCGC CTACGTTTCTTTCAG 100 101 ST40_RS25490 5569298 .. 5569312 - -7.8 -3.53811 GGGATCCGGCTGAAA CGGCAT GTC ACGCCG GGCCTATTCGGCGGG 62 29 ST40_RS25485 NONE ST40_RS29730 5567539 .. 5567555 - -9.4 -3.33261 CCCGAATTCGGACAA GGGCTC GAGCT GAGCCC GTCTGACCGTCTTCT 66 293 ST40_RS25430 NONE ST40_RS25425 5553781 .. 5553797 - -9.3 -2.75481 GCGCAATCGCAATGA GCGGGGC CAT GCCCGGC CGGTATTTGAACAAC 60 75 ST40_RS25420 NONE ST40_RS25415 5551536 .. 5551560 - -7 -3.05463 ATGGGCCTGATGGAA CGCGCACGCC GTTAT GGTCTGCGCG GAGGCAACCCGATCT 52 378 ST40_RS25400 5548490 .. 5548509 - -5 -2.57931 GCCAGTCGCGATAAC CGGAAATT CGGC AAATTCCG TCCACCCGGCCCGGC 46 119 ST40_RS25395 5546692 .. 5546716 - -12.2 -4.67942 CGCAAGAAACGAAAA CGCCCTC-TCC TTCC GGATGAGGGCG TTTTTTTGTTTGCGG 100 148 ST40_RS25375 NONE ST40_RS25370 NONE ST40_RS25365 5540077 .. 5540112 - -6.1 -3.10894 ACGAGCATCATGCAA CG-CGCCTGCCGGCGCC TCAT GGC-CCGGGAAACGTCG ATCGCCATCGGCGCA 52 6 ST40_RS25325 5530763 .. 5530786 - -3.2 -3.34984 AGACGCCGGAAAAAC GCGAAAGTGAC CCG ATCA-TTCCGC TGCTCCCAGCTTTAC 47 17 ST40_RS25320 NONE ST40_RS25315 5528745 .. 5528757 - -5.5 -3.64599 TGACTACACCCTAAA GACCT GTG AGGCC GCGCTTGCGCAGCAG 58 8 ST40_RS25310 5527576 .. 5527589 - -2.3 -4.05788 CCTGCCGAAAGGAAA TGCCA GGTC TGGCG CGTCTCAACCGGGAA 57 339 ST40_RS25230 NONE ST40_RS25225 NONE ST40_RS25220 NONE ST40_RS25215 NONE ST40_RS25210 5506573 .. 5506591 - -2.3 -4.09511 AATACGCTGCCAAAA CCCGACC TCAGC GATCTGG ACGCCTTGCTCGAAG 57 212 ST40_RS25195 5497001 .. 5497021 - -8.9 -2.55 CAACAGGGCAAGCCA GGCCGGTCG TTT CAACCGGCA CCAGCTCAAGAAACA 59 45 ST40_RS25190 5495648 .. 5495667 - -4.2 -2.72739 TTTAAGGGACAGAAC TCTTGGCCG GAG CGGCC-AGC CTCAATAGAGGTTTT 45 27 ST40_RS25185 5493992 .. 5494009 - -14.1 -2.88544 TTTCAGGGTGAGACA GCCCGCC AGAA GGCGGGC CGTCCGCAGAGGCAG 86 140 ST40_RS25180 NONE ST40_RS25175 NONE ST40_RS25170 5491846 .. 5491867 - -5.1 -3.02144 CGATCTCTGCCAAGA CAGTCACTC CGGA AAGTGGCTG ACGATGATGAACATG 50 7 ST40_RS25165 NONE ST40_RS25160 5489767 .. 5489781 - -5.6 -2.83403 GTCTCCTCAGGAAAT GCGAGC GCC GCTGGC GTCGAAGAAAAGCGG 47 2 ST40_RS25155 5488050 .. 5488089 - -15.9 -3.76411 GGAAAATCAGGGAAA GCACCGGCAGGCCGTGGGCT CGA AGCCC--GGCCTGCCGGT-C AGGTGCCGGCCTACG 100 36 ST40_RS25150 5486453 .. 5486483 - -13.3 -2.71144 TATCCTGTCGAAGGA TGCCCTCCGGAAC ACCTG GTTCCGGAGGACT GCTTCATGACGGTCA 79 38 ST40_RS25145 5485839 .. 5485852 - -2.3 -2.73483 AGCCGAGTTCAAGCA GGCTC AATG GACCC CTCCCTCGGCATCGG 39 15 ST40_RS25140 5484507 .. 5484553 - -2.1 -3.59262 TTTGATACGCCGAAA GGGCGCACTCCTTCCGGCTGG GTTAG CCAGCCAGAAGGAACAGGGTG ATTGACGGAAAGAGG 47 1 ST40_RS25135 NONE ST40_RS25130 5482901 .. 5482913 - -3.3 -2.66316 TTCCTCATGAGATCA CCTGA AGG TCGGG TTGCGCTTTTCCAGG 40 10 ST40_RS25125 NONE ST40_RS25120 NONE ST40_RS25115 NONE ST40_RS25110 5479048 .. 5479068 - -7.5 -2.72144 GCAGTTGCTGCAAAT TCCCCCTCA TCC TGAGGAGGG CGCCAGCCCGTCTCG 55 184 ST40_RS25105 5477329 .. 5477339 - -3.2 -2.94331 GCAAAAGCAGAACGA GAGA GAA CCTC ATCCCCGGCCTTTTT 42 113 ST40_RS25100 5476244 .. 5476290 - -8.6 -2.52742 AGGGTTTCATAAGAT TGCAGCACCGGGGCTCTCCTCC ATT GGAGAAAGGCTCCCGTATTGCA GTTATAAACTCAAAT 56 60 ST40_RS25095 NONE ST40_RS25090 NONE ST40_RS25085 NONE ST40_RS25080 NONE ST40_RS25075 5471882 .. 5471900 - -13.8 -4.81249 CCGGAAATGCAAAAA GGGCCGGC AAA GCCGACCC TTCTTGACGTTATGT 100 49 ST40_RS25070 5470844 .. 5470863 - -11.4 -4.35524 GTTCGAAACGGAAAA CGGCGACC TTCT GGTCACCG CCCCTTTCACCAAGG 93 378 ST40_RS25055 5469355 .. 5469370 - -11.8 -5.31456 GGAAGGCACAAAAAA GGGCGC CGAA GCGCCC GTTTTGTTCTCGTGT 100 40 ST40_RS25035 5465882 .. 5465898 - -15.1 -3.68569 GCACTGATGGAAGAA GGCGGGC AGT GCCCGCC TCTTCCTCCCGCCAC 95 156 ST40_RS25025 5463315 .. 5463358 - -18.2 -3.07233 GGATAACTTGCAAGA CGACAAAGGTCCGTCTGCCGC GAG ACGGCAGGCGG-CCTTTGGCG TATGCACCAACTCAG 100 361 ST40_RS25010 5462015 .. 5462029 - -4.9 -3.18681 CGTGAATGGGATCAA GCCCG GAATT CGGAC ACTTGGACACCGCGC 49 141 ST40_RS25005 NONE ST40_RS25000 5461159 .. 5461181 - -10.5 -2.76696 GTGGCCGGCAAGAAG GCGCGGCAA TGGGT TAGCCGCGC TCTTCGTCACCTCGT 66 16 ST40_RS24995 5459703 .. 5459721 - -11.7 -4.14013 CAAAATCGTTGAAAA GCCGCCT TTTTC AGGCGGC TTTTATTTTGCCTTG 91 300 ST40_RS24985 5458587 .. 5458615 - -7.4 -2.64155 GTTTTCCCAAAGCCA CCTGTCTGATGC GCTTG GCATCACACCGG TTCACACCAGCCGTA 49 230 ST40_RS24925 NONE ST40_RS24920 5448027 .. 5448055 - -2.4 -3.67296 TAGCAGGCAGCGAAA TTTGCAGCAATCG ATCT CG-TTGCTGCATC GCACGCCCGTATGTT 50 54 ST40_RS24915 5446822 .. 5446845 - -3 -3.73072 AACTGCCGGATGAAA GGTGCCGG-GT TTC ACTCCGCCGCC GAGTGATGGGCACTG 51 13 ST40_RS24905 5444585 .. 5444621 - -10.2 -3.32521 ATGATAGGCCGATAA GGGCCTTGAACCCGTCAG CTC CTGGCAGG--CAAGGCCC TTTCCTGTTTTGCCT 73 41 ST40_RS24880 5437352 .. 5437409 - -6.9 -2.87564 GGACCTGCCTACACA GTCGCCTCCCCGACGCCCTCCCG-GCC AATCGA GGCGCGAGCTGGGATCGGGGATGC-AC AGGCCTTTCGGTCTC 53 89 ST40_RS24870 5434691 .. 5434709 - -6.7 -2.60496 GCGGGCCGTAAAGAT GCCGAAA TCGTC TTCCGGC CAGATCATGGCCACG 49 162 ST40_RS24820 NONE ST40_RS24815 5424090 .. 5424101 - -5.8 -3.409 AAACTTGCAATAATA CGGT TCTG ACCG GATCAGAAAATTCTA 56 136 ST40_RS24810 5423307 .. 5423341 - -13.7 -4.8622 CGCGTGAACGAAAAA GAGCCGCCAG-TCC ATCTGAGG GGACCTGGCGGCTC TTCAAACATGAGGCC 100 62 hpaR 5414625 .. 5414668 - -16.1 -3.484 CGCACGAGACCAGAA GCCCGGGCTCTTTTCCAGCT ATGCA AGCTG-AAGGGAGCCCGGGC CGTTTCCGGCCAATA 100 125 ST40_RS24720 5401114 .. 5401140 - -12.9 -3.54489 GGAACCCGAAAGCAA CCGGTCGGCGC GAGAT GCGCCGGCCGA AATAGTCGCCTTATT 85 36 ST40_RS24715 NONE ST40_RS24710 NONE ST40_RS24705 NONE ST40_RS24700 5396228 .. 5396244 - -10.8 -4.63527 TCACGACCCCAAAAA GCGCCG CTCGC CGGCGC TTTTTCCTTTCGTGG 95 58 ST40_RS24625 NONE ST40_RS24620 5367425 .. 5367443 - -8.8 -4.59853 TCAATCGTTGAAAAA CCGGTTGC CCC GCAATCGG ACTGGGCGGTGACCG 85 442 ST40_RS24600 NONE ST40_RS24595 5361583 .. 5361610 - -10.5 -4.56597 CGGGGCTTCGAAAAA GCAACGGGCGG TCAATG CCGCCCGTCGT TAAAAAAATTTGTTG 95 59 ST40_RS24590 5360460 .. 5360505 - -16.7 -3.63627 CGGCCACAGGCCAAA GGCCGGTACCCGGGCACACGG ACGA CCGCGTGCCCGGGTGCGGGAT CATCAGGAAACGACG 100 28 ST40_RS24585 NONE ST40_RS24580 NONE ST40_RS24575 NONE ST40_RS24570 5355314 .. 5355326 - -10.5 -2.88544 GCTTACCTCCAGAGA CCGCC TGC GGCGG CAAACAGCATGCCCC 68 0 ST40_RS24565 NONE ST40_RS24560 NONE ST40_RS24555 5350476 .. 5350489 - -3.9 -3.76413 CTTCAAAATTCGAAA TGATA TTCT TATCA AGTCACATGAGAGCC 53 28 ST40_RS24550 NONE ST40_RS24545 5345902 .. 5345915 - -3.7 -2.60508 CACCTTTCAAAAATG TGGGC TCGG GCCCT TCGATTACCGGACGG 42 30 ST40_RS24540 NONE ST40_RS24535 5343691 .. 5343703 - -7.7 -2.54896 TGCCGACTCAATTCA TTGGC GGA GCCAA TCGTTTCTAGGCTGA 53 32 ST40_RS24525 5341359 .. 5341375 - -8.7 -3.19789 AGAGTCAAGATCGAA CCTGACG CTT CGTCAAG TAGCTTTTCCTCAGG 65 166 ST40_RS24520 5340042 .. 5340052 - -2.4 -3.18383 AGCCCCATCCATCAA CGCC TCA GGAG GTTCAAGTCCGATCT 43 77 ST40_RS24515 5339264 .. 5339274 - -5.4 -4.2349 CCGGGACAGGCAAAA CATG CCC CATG CGGCCCCGCCCCGGC 69 221 ST40_RS24510 5338603 .. 5338618 - -6 -3.25823 GCTTCCTGACACGAA GCTGCC ATTG GGCTGC CTGCCTCACTGAACC 54 150 ST40_RS24485 5334699 .. 5334724 - -3.1 -3.07816 TCGGTACTGATTCAA CCGGG-AAGCCA AAA CGGCAGACCCGG TATCAGCGACCTGTG 43 28 ST40_RS24480 5333554 .. 5333581 - -6.3 -4.56597 CCTCCCGGCTAAAAA GGCGGCTACTGCC TGTC GACAG--GCCGCC TGATCAGTTAGTGGG 74 443 ST40_RS24445 5327201 .. 5327213 - -4.7 -3.57144 GCCTCTACGTGGAAA GCCCG GAA CTGGC ACGCAGGTTGACAGT 54 321 ST40_RS24420 5318561 .. 5318575 - -5.6 -4.76041 CATAGGCAGCAAAAA CTCCTG TCT CAGGCG CATCGCGCAACGACA 76 96 ST40_RS24405 NONE ST40_RS24400 5313939 .. 5313962 - -16 -4.75063 AGAAAACGCGAAAAA CCGCCCCGGA GGCA TCCGGAGCGG TTTTCAAAAAATGTG 100 54 ST40_RS24395 5313266 .. 5313294 - -12.5 -4.2586 GGACAGCAAGACAAA TAAAAAGGCCGGC AGT GCCGACCTTTTGA TTGCGCCCCACCGGC 100 65 fliF NONE fliG NONE ST40_RS24380 NONE fliN NONE ST40_RS24370 NONE flhA 5305433 .. 5305450 - -7.7 -3.86822 CAAGGCCTGGACAAA GCGGC-GT CAG ACAGCCGC AAAGCGTATCGACCA 69 253 ST40_RS24350 5304044 .. 5304060 - -4.4 -3.90112 CGTGCTGGAAGCAAA CCGCAA GGCCA TTGCAG ATGCCTTTCCGGAGC 59 119 ST40_RS24340 5301906 .. 5301937 - -11.5 -3.30124 TGCCATCTGCCACAA GCGCGCCTGGCGGC AAGAA ACCGGC-GGCGCGC TACAACCTGTTCCGG 72 265 ST40_RS24330 5300053 .. 5300085 - -11.4 -2.85996 GATCATGTAGGAAAT TTCC-AGGTGAGCCG GCTC CGGCTTACCTCGGAA GACGACATGACAGAC 71 57 ST40_RS24320 5298031 .. 5298041 - -8.2 -2.87564 CCATCCTTCGAGACA GGCC TTC GGCC TTCCTCAGGATGAGG 59 160 ST40_RS24295 5290105 .. 5290116 - -4.4 -3.14132 TGGTTTTGTCAGGAA TGCA GTCA TGCA ATCGGGGTTTCCGGT 47 62 ST40_RS24290 NONE ST40_RS24285 NONE ST40_RS24280 5287900 .. 5287912 - -3.3 -4.20354 AAGTTAACCGGAAAA CCCGC CCA ACAGG AAATCACCATCACGA 58 67 ST40_RS24275 5286346 .. 5286367 - -8.7 -2.56596 CCTTTCACGAAGCCA TGCGCGCTG CCTG CAACGCACA CGATGTTGCCGACTA 56 391 ST40_RS24260 5283185 .. 5283216 - -5.3 -2.53715 TGGATCAGCAGGAAT TGAGCTG-AGCT-GC TGCG GCGAGCTTCAACTCA GGCGAATTCGCTTTC 46 23 ST40_RS24255 NONE ST40_RS24250 5281187 .. 5281229 - -6.3 -3.16338 ATTTATACCAATACA CAAGGCGTTCCGCGGCTCCCT CTC AGGCAGCC-CGCA-CGCTTTG CAGAAATTGCCGAAC 54 5 ST40_RS24245 5279072 .. 5279091 - -3.6 -4.41348 TGCTGGGGAAACAAA GCCAAC-CA CCA TGAGTTGAC TGGGGATGTTGGTAC 66 148 ST40_RS24240 NONE ST40_RS24235 5276500 .. 5276536 - -14.6 -2.70932 TTTTTTGGGGAATGA GTGCAAGAGCGGAATCC GATT GAATCCCGCTCTTGC-C ATTGGTCTTTGGATT 83 40 petA NONE ST40_RS24225 NONE ST40_RS24220 5273429 .. 5273449 - -18.3 -5.27335 CCCCTCAAAGAAAAA GCCGCCGGA AGG TCCGGCGGC TTTCATCATGCACTT 100 54 ST40_RS24215 5272884 .. 5272904 - -6.7 -2.64735 ATTCAAAATCAATAT CTGCGGGAC ACA GGCCCGCAT CAGCGATGGTTTATT 51 36 ST40_RS24210 5271896 .. 5271908 - -4.1 -3.28712 GGCCGGTGGTTATAA CAAGT TTG ACCTG CCGGTCGAAGCAATT 47 92 ST40_RS24205 NONE bluB NONE ST40_RS24195 5269746 .. 5269764 - -5.8 -2.71731 TTGACCCGGCAATCA TGCCCGGC GTT GCCGCGCG TACGCCCGGCGGGCT 46 285 ST40_RS24185 5267699 .. 5267713 - -4.2 -3.54543 AGGCACTGCGGCAAA CGGACA TCA TGCCCA TTTGCCGCAGTTTGC 52 50 ST40_RS24180 5267295 .. 5267337 - -18.7 -4.07568 TCGGCCCTGTTAAAA CGCAAAAGCGTGCTGC-GTCC TCA AGACGGCAGCACGCTTT-GCG GTTGGCGATCCTGTC 100 69 ST40_RS24155 5263664 .. 5263675 - -4.4 -3.60364 GCCACAAGAACAACA CCAT CATC ATGG GCCCGGGCGGCTATC 54 141 ST40_RS24130 NONE ST40_RS24125 5255680 .. 5255692 - -4.7 -3.64487 TGACATGCTGAAGAA GCTGC TCG GCGGC GGCGACTGAGGCAGT 55 91 ST40_RS24110 5253388 .. 5253398 - -8.2 -5.00616 TCCTTCGCCAAAAAA GCCG ATC CGGC CTTTCAGGAAGACAC 93 64 ST40_RS24095 5251074 .. 5251090 - -3.5 -3.65224 AGGTGATCGCAACAA CCCCGGC CCG GCAGGCG CAACTCACCCTCCCC 51 263 ST40_RS24035 5238300 .. 5238316 - -9.3 -3.44229 ACCCGATCACGATAA CCGGGCG GGC CGCCGGG AAAAGTCCCATGCCG 66 309 ST40_RS24030 NONE proC 5236873 .. 5236906 - -16.8 -3.05384 TTTCGGGCCAGGTAA CCAAAAGGCCGCCG GAGTTT CGGCGGCCTTTTGT CTGATTAAACCCGTG 100 55 ST40_RS24015 NONE ST40_RS24010 5234670 .. 5234702 - -7.6 -4.03234 TTTCCGGCATAGAAA GC-GC-GGGCAGCTGG GAT CCGGCGGCCCTGCTGC TCGCCGGTCCGACAC 71 199 ST40_RS23985 5229367 .. 5229384 - -14.1 -5.10163 AACCGCAAAATAAAA GGCGGGC CAAT GCCCGCC TTTCTGGTCCTTGCC 100 55 ST40_RS23975 5227667 .. 5227695 - -19 -3.04864 CTGAGAATGAAATGA TGATGTCGGCGC CTCAC GCGCCGACATCA ATCGCGATTTTTCCG 100 10 ST40_RS23930 5220690 .. 5220706 - -4.3 -4.09685 GTCCATGGCTGAAAA GCCGGAC GAC GTCGAGC CTGAGGTCAAGACCG 61 138 ST40_RS23890 5210770 .. 5210791 - -13.7 -5.60689 GCAGACAAGAAAAAA CCCGGCACC TTGC GGTACCGGG TTTTCCGTATCGGCC 100 52 ST40_RS23885 NONE ST40_RS23880 5205695 .. 5205708 - -3.1 -3.08464 CCACGATTGATTGAA CTGAC CTTG ATCAG ATACTTTTCTGGTAA 43 118 ST40_RS23875 5204332 .. 5204344 - -6.2 -4.07975 CAAGCGAAGTACAAA GCCG CGAAC CGGC CTGCTTGCAAGCAGG 67 343 ST40_RS23870 NONE ST40_RS23865 5203511 .. 5203538 - -8.4 -2.87132 CGCTGTCGTGATACA GCG-CCGAGATCC CCA GGATCGCGGTCAC TGGTCTAGAACAGCG 59 30 ST40_RS23860 NONE ST40_RS23855 5199894 .. 5199907 - -4.5 -3.34895 GGCACTCTCAAGCAA GGTCGC CAT GCG-CC GCTTCGGGGGCGACT 49 492 ST40_RS23845 5198078 .. 5198108 - -14.6 -2.71712 GGTCTCCTGTCAAAG GTGCGCGGGCCTCC AGT GAAGCCCCGCGCGC TTCAGGCGGCAGCCG 83 59 ST40_RS23840 NONE ST40_RS23835 NONE ST40_RS23830 5194126 .. 5194141 - -6 -3.14931 CTCACTTTGTATCAA CGCCTC GGCA GGGGCG GCAGGCCGGACCTCA 52 467 ST40_RS23825 NONE ST40_RS23820 5190270 .. 5190303 - -11.1 -2.77523 TGCTGACCAACAGGA CGCAAATTCCGGCTC TGAC GAACTGAAATTTGCG GCAGGTATCACAGCT 69 73 ST40_RS23815 NONE ST40_RS23810 5189176 .. 5189207 - -10.1 -3.55202 TACCGTTAAAGAACA GGAGGGGCCCAAG CCATGT CTTGGCCCCTTCC ATTGACTTTTGCCGT 71 466 ST40_RS23795 5185322 .. 5185343 - -15.1 -4.4267 GTGCAAAACGCAAAA GGCCGCGCC ACAA GGCACGGCC CTTCTTGCAACAGTC 100 52 ST40_RS23765 5179583 .. 5179613 - -4.1 -3.84185 GGCACTGAAACAGAA GATCAATACGGAAC TCGG GTCTCGTATTG-TC GAAATAAAATCATAC 54 74 ST40_RS23720 5172310 .. 5172321 - -7.2 -3.34398 CCGGGCTGCGAAATA CCGC CGCA GCGG CCAAAGCTGGCCGCA 56 233 ST40_RS23705 5168361 .. 5168371 - -6.8 -3.08032 CGCGTTTGAAAAGGA CCTG ACA CAGG AAAAAACCGCTGGGT 54 102 clpS 5165657 .. 5165691 - -3.7 -3.6944 CCCCCAAGACAAATA GCTCTT-TTTTGTCAG TTAC CTGACACAAGAAGATC GTCTCTGCCGTCAGA 53 104 ST40_RS23685 NONE ST40_RS23680 5162868 .. 5162889 - -2.1 -3.57144 TTTGCGATGGTGAAA TTCCGGACC ATGC GCCCCGGCA CAAGCGACGCAAGCG 49 466 ST40_RS23665 5160491 .. 5160501 - -4.6 -3.5518 TGAAGATTGAGACAA CCCG GCC CGGA TTTAACGGGGGACCG 52 27 ST40_RS23660 5159858 .. 5159870 - -4.7 -3.66658 AATATCTCGAAAAGA CCGAC TGC GACGG CATCACCGGCCCGCC 54 182 ST40_RS23650 5156529 .. 5156555 - -19.5 -3.53012 GTTCGTGGCGGGAAA CGCGGCGCCAA TAACC TTGGCGCCGCG CCGCTATCCTGTTAC 100 37 ST40_RS23645 5156047 .. 5156063 - -12.3 -3.30124 CGTCATTCCGGACAA GTGCAGC AAG GCTGCAC GCTGATCCGGAATCC 78 93 ST40_RS23640 5155297 .. 5155313 - -13.7 -3.30243 AGTCATTCCGGACAA GCGCAGC AAA GCTGCGC GACGAACCGGAACCC 87 226 ST40_RS23620 5150164 .. 5150196 - -12 -2.77895 CCGATCTGGAACAAC GCCGATGCGCAGGGC AAAT GCCCCG-GCATCTGC TTTGGCAACGGTCTC 65 137 ST40_RS23605 5146065 .. 5146094 - -12.8 -5.53288 TCCAATTGAAAAAAA GCGGCCGG-CGGG ACTTG CCCGGCCGGCCGT TGGAAAGGCCCCAAA 100 122 ST40_RS23585 NONE ST40_RS23580 5142215 .. 5142241 - -16 -3.85698 GGGGTTCTGCAGAAA TTGGATACCGGC GTC ACCGGTATCCAA TCGCCTTGCACCTGA 100 134 ST40_RS23560 5137286 .. 5137302 - -12.3 -3.09749 GATGTCGAACAGATA CAGCCAG TGC CTGGCTG ATCCAAAGTGGCCGG 72 92 ST40_RS23535 5132764 .. 5132778 - -3.4 -3.70902 GCCCTCACACCGAAA GGCCGG AGC CTGACC GAAATCCTTGGACAG 54 136 ST40_RS23525 5131576 .. 5131604 - -16.7 -3.2048 GGGAAACGGGATTAA CAGCGCGCGGACC CTA GATCCGTGCGCTG CGGAAAACAAGACCA 100 64 ST40_RS23520 5130296 .. 5130322 - -18.8 -2.53822 TGCAGCCCACAACAG GAAAGGGCGGCC GTC GGCCACCCTTTC GCAAATCTTTCGATG 100 51 ST40_RS23515 5129538 .. 5129552 - -9.2 -3.72576 TCCGCTTTTAGCAAA GGCGCG GAT CACGCC AGTGATATGACGCGC 70 74 ST40_RS23510 5128920 .. 5128963 - -7.5 -3.33737 GATCAACCGGCAGAA CACCCG-GCCGG-ACAAGGAA GAAA CTCCCTGTGCCGGCGCGAACG AAAGCTGCCGCGACT 61 77 ST40_RS23500 5126075 .. 5126098 - -18.2 -3.66784 GTAGGGCGAACACAA CAGAGGGGCC AACC GGCCCCTCTG TCATCGCTTTCAGTG 100 50 msrP 5124912 .. 5124937 - -8.9 -4.78077 GTGAATCAAAATAAA CTGCCGGGTCT TTTA AGACCCGGCTC TTTTTTTGCCCAGAC 93 78 ST40_RS23475 NONE ST40_RS23470 5120150 .. 5120166 - -3.6 -2.83894 ACCACTATGACCAGA TGCTGC CCGTT GCGGCA CTGACGACCATCCTG 42 178 ST40_RS23445 5113797 .. 5113821 - -22.9 -5.63517 GCCTCAAATAAAAAA CCCCGGCGTGC AGT GCACGCCGGGG TTTTTTGATAACTGA 100 52 ST40_RS23435 5111629 .. 5111641 - -5.5 -4.57353 CCGGATTACAGAAAA CGGCA ACC TGCCA TCGGCACATTCGGGC 73 156 dnaG 5109532 .. 5109547 - -4.6 -3.5032 TGCGCACACCAAAGA GGGCAT TTTC AGGCCC AATGCCGGTTCGTCG 52 129 rpoD 5107083 .. 5107100 - -14.1 -5.43866 GAAGTTTCAAAAAAA CCCGGCG TCTC CGCCGGG TTCTTTGATGTTTCA 100 57 ST40_RS23420 5105730 .. 5105753 - -12.4 -3.65902 CTGAGGTCAGTCAAA CTGGCGGGGT CAGA ACCCCGTCAG TCCCCGTTCCAGCCA 83 11 ST40_RS23405 5101570 .. 5101584 - -10 -3.35798 ACGGCCGAGGGAGAA GACCAG AAC CTGGTC TCCAGCATCCTGCCG 68 281 ST40_RS23375 5096885 .. 5096910 - -10.4 -5.72622 CTCAGAAACAAAAAA GCTCCCCGCG GATGAG CACGGAGAGC TGATTGATCAAATGA 100 85 ST40_RS23370 NONE ST40_RS23365 NONE ST40_RS23360 5094482 .. 5094526 - -18.6 -4.75472 GGCAGAGTAAGAAAA CAGCG-AAGCCCCGGCACGGC ATCC GCCGCGCCGGGGCTTTCGGTT TACCGGATCAGAACT 100 33 ST40_RS23340 5089512 .. 5089562 - -8.3 -3.6806 AGAGATCGAGTGAAA GCCCAGTGCCCCA-GCAAGACTGGC GGA GCCAGGCTTTCATGGGG-ACGGAAC TGATCGTCAGCCTGC 68 32 dctP 5087541 .. 5087582 - -13.1 -4.63218 GCTTTGGCAAGAAAA CTGCGTGCCCTCACCTTGCA AGG TGGAAAGCAAGGGCACGC-G TCACTGGCCGGGTCC 100 40 ST40_RS23325 NONE ST40_RS23320 NONE ST40_RS23315 NONE araD NONE ST40_RS23305 5082660 .. 5082682 - -9 -3.28712 CCGCGGCGGCTACAA GGGCTATGGC GCC GCCAACGCCC AGTTCCGCATCGCCG 63 309 ST40_RS23275 5076081 .. 5076095 - -2.7 -3.88232 GTGGGTACAGAAGAA GAGCC TTGCT GGCGC TCGAACATCAGGCAG 54 33 ST40_RS23270 NONE ST40_RS23265 NONE ST40_RS23260 5073235 .. 5073270 - -11.8 -3.14132 CGTGCCCTTGACGAA GGCAAGCAGGAGCGGA CCGC TCCGCTGGTGCGTGCC ATCGAGAGTGTCCGG 69 444 ST40_RS23250 5071651 .. 5071678 - -11.3 -4.79451 AGCCGAAACAGAAAA GGCTCCGGC AATCTCGCAA GCCGGAGCC TTCTTTTTTACGCCA 100 47 ST40_RS23240 5070297 .. 5070321 - -22.9 -5.63517 GCCGGAAACAAAAAA CCGGGGCCTGG TTT CCAGGCCCCGG TTTTCTTTTGTCCAA 100 77 ST40_RS23225 5067875 .. 5067889 - -4.9 -3.04322 TCCAATGCCGCAACA GCGCC AGGCA GACGC CGGCGATAGAGCAAT 47 113 ST40_RS23220 NONE ST40_RS23215 NONE ST40_RS23210 5064472 .. 5064483 - -7.2 -3.65314 TCGAACGCCGAATAA CCCG CATC CGGG AGAGCTGGTCGCCGG 60 102 ST40_RS23160 NONE ST40_RS23155 NONE ST40_RS23150 5050371 .. 5050395 - -3.6 -4.75404 AAAGCCTACGAAAAA GGCAGCACGTCC AGC GGACATG--GCC TTGGTCTATCGGTCT 74 161 ST40_RS23140 5047710 .. 5047737 - -4.1 -3.21416 CACTTGCAGCAGTAA CGCATGG-CGGC TGACC ACCGGCCATGGG GCCGATCCCCCATTC 47 64 ST40_RS23135 5046935 .. 5046953 - -2.4 -3.02829 GACAGTTGCGCAAGA CATCAG CAAGCCT CCGATG AGAACGCTTTTGGCA 42 93 ST40_RS23130 5045768 .. 5045787 - -15 -4.04206 CCACCCGCACAGAAA CCGGCAGG CCCG CCTGCCGG TTTCGAGTTGTCATT 100 402 ST40_RS23115 5041394 .. 5041422 - -18.9 -2.94416 CAGTCTGATCAGACA CCGTCCGCGGTCA AAG CAACCGCGGACGG GCCTGTTTTGTTGGG 100 59 ST40_RS23080 5033125 .. 5033147 - -11.9 -4.17132 AAACCTTCCAAGAAA GGGCCGCGC GTCTA GCGCGGCCT TTCTCGTTTATCAGC 91 46 ST40_RS23070 5031861 .. 5031871 - -8.2 -3.82202 GACGCCGAAAGACAA GGCG AAG CGCC TGCCGGTGGTCAGAC 71 35 ST40_RS23055 NONE ST40_RS23050 5029583 .. 5029602 - -4.2 -3.09878 CTGAGCGACTCAATA CAGCCG AAGATTGA CGGCCG CAGTGTAATCAACCG 47 61 ST40_RS23045 5029265 .. 5029292 - -16.2 -3.48924 GTAGTGGGCACAGAA CCGCGCGGCCGC TCAA ACGGCCCCGCGG CAGCAAAGATGCAGG 100 51 ST40_RS23040 5028716 .. 5028726 - -8.2 -3.79113 ACCTTTTGAGAACAA GGGC GAA GCCC CTCCTTCAAGCCGTG 71 147 ST40_RS23035 5028236 .. 5028259 - -7.4 -3.70919 GCCAAACCTGAAGAA CCG-AGCCCGG CCA CCAGACTGCGG CAGCCACCAGCCTGT 65 55 ST40_RS23005 5019280 .. 5019307 - -17 -3.78934 CTTCCGCCAGAACAA TCAGCCTCCGGC AACT GCCGGAGGCTGG TCTGTGCACATCAGA 100 36 ST40_RS22965 NONE ST40_RS22960 5008895 .. 5008907 - -4.7 -3.33696 GTTGGCCGCAATGAA GCTGG CAT CCCGC AGGCAAAGGTCGCGG 51 42 ST40_RS22955 5008410 .. 5008427 - -6.2 -2.71785 CGTCAAAATAGCAAT GGCCGG ACGCTA CCAGCC TTCCCGGTTTCGAAC 50 46 ST40_RS22950 5007316 .. 5007341 - -4.5 -2.78596 CATTGCCGCACGATA CTGCGCCGGGC TGCC GCCCTCGGCAG CAACAAGAAGATCGC 43 440 ST40_RS22935 5004337 .. 5004347 - -4.6 -2.78547 TCAGCTCATGAATTA CCGG TTG CCAG CTCAAAACCTTCGTC 45 5 ST40_RS22930 NONE ST40_RS22925 NONE ST40_RS22920 5002331 .. 5002347 - -6.5 -2.62396 CACTCTTGCACACGA CAGAAGC ACT GCGTCTG CTTACGTCCGGAAAA 51 54 ST40_RS22915 NONE ST40_RS22910 NONE ST40_RS22905 4998644 .. 4998671 - -17 -2.75229 GAAAACGTGTAATCA GCGCCGCCTGCCG GCA CGGC-GGCAGCGC CTCAAGGCCGGTCCG 91 276 ST40_RS22900 NONE ST40_RS22895 NONE ST40_RS22890 NONE ST40_RS22885 4995357 .. 4995368 - -5.8 -4.63218 CGCTCGCGAAGAAAA GCGT CGAA ACGC TGAACAATCAGAATA 75 114 ST40_RS22880 4994514 .. 4994527 - -2.3 -4.19371 GAAATGCGCAATAAA CCGAC ACCT GCCAG CGAGTTTCATCTCTC 56 32 ST40_RS22875 4993815 .. 4993828 - -2.4 -2.78679 GGCCCTTATCTAAAT GTTG TCAGAC CAAC CGCCCTTTTCGCAAT 39 6 ST40_RS22870 4992705 .. 4992717 - -3.3 -3.87869 TTAACGGGGCAGAAA TCGCT CAA AGCGG GTAAGATCGCTCAGC 54 194 ST40_RS22865 4991289 .. 4991306 - -14.1 -5.1417 CGAGAAAATGAAAAA GGGCGGC AAAC GCCGCCC GAAGAAGTTTGGCAG 100 189 ST40_RS22860 4990906 .. 4990916 - -4 -2.69871 CCCGACATGAAATAG TTTC CTT GAAA GGGTCAGGCGGCGGC 42 29 ST40_RS22855 NONE ST40_RS22850 NONE ST40_RS22845 NONE ST40_RS22840 4985771 .. 4985787 - -2.1 -2.72866 GAGATCAGAAATTGA GCCACGG TCA CATTGGC GGCTCGAAAAGGCTC 39 64 ST40_RS29725 NONE ST40_RS22830 4983457 .. 4983471 - -8.5 -5.64274 TCAGGCATAAAAAAA CCGCC TCAAG GGCGG TGAGTGTCAAAGGCT 100 52 ST40_RS22825 NONE ST40_RS22820 NONE ST40_RS22815 4982383 .. 4982410 - -2.7 -4.07885 TACCTGTGCCGAAAA TG-CG-GCGGCCG TTCG CAACCGCTCGTCA TTGGTTGCGCAAGCG 58 23 ST40_RS22810 4981813 .. 4981823 - -2.4 -3.09772 CCAAAGTTTCAAAAC CGGC ATC GGCG TTTGTTCGTTAATTG 42 124 ST40_RS22805 4980912 .. 4980923 - -2.2 -5.06223 AGAAATCAAAGAAAA CGAGC TGC GC-CG AGCAGACAGCAGGAC 74 292 ST40_RS22800 4978939 .. 4978962 - -2.3 -3.36518 TGAAAATGTGGAGAA GCCGGCCAA CTGCAC TTGGGCCGC ATCAGGTTGCGGATG 44 358 ST40_RS22790 NONE ST40_RS22785 4976354 .. 4976380 - -8.6 -4.15222 ACTCGTGGCAACAAA CGACCGACCGGC CGA ACCGGTCACCCG TTTGTTGTCATTCTT 77 126 ST40_RS22775 4974705 .. 4974744 - -4.2 -3.38522 CAGTGAGCCGAAACA GGATCAGATGC-GCATGGC CAA GCCACACCGGCCCCGATCC GCCGCCAGGACGAAC 51 204 ST40_RS22770 4973885 .. 4973939 - -12.1 -4.11371 GAACACCTGCCAAAA CGACTGACCGCTG--CCCCGTGTCCGC AAC GCGGACACGGGGATCTGGAGCCATCCG GTTTCTAACTCCCGC 91 49 ST40_RS22755 4967676 .. 4967692 - -10.1 -4.32678 TGCCGAAATAAACAA GGGCACC GCT GATGCCC GATGGCTATTGATCG 87 174 ST40_RS22745 4965132 .. 4965154 - -13.4 -5.58454 CTGATATTAAAAAAA CGCCGGACTT GTT AGGTCCGGCG CTTCTTTAGCTGTTT 100 39 ST40_RS22740 4964523 .. 4964546 - -2.4 -3.31792 GCAGGAGGGCGACAA GGGAGAGA TCCATTAT TCTTTCCC CTCTATCGGATCGGC 45 14 ST40_RS22735 NONE ST40_RS22730 4962532 .. 4962544 - -2 -3.05562 AGAAATTTTGGAATA TTCA ACAAA TGAA AGCGAACATTCCCCT 42 51 ST40_RS22725 NONE arsC NONE arsH 4960985 .. 4960996 - -3.6 -4.11394 ACTGCAGGCTGAAAA CCGC GATA GCAG GTTTTCAGAGGCTGA 60 30 ST40_RS22705 NONE ST40_RS22700 4956940 .. 4956960 - -2.6 -5.626 GACCGCACAAAAAAA CTGAACCGA CCGT TCGAT-CAG GCTGAAAGGGAAGGC 87 22 ST40_RS22695 4955880 .. 4955912 - -24.3 -4.85599 TTCAGTGCACAAAAA GAAAACCCCGCCGGA AAT CCCGGCGGGGTTTTC AGTTTGCCCACGGCT 100 57 ST40_RS22685 4953478 .. 4953508 - -5.3 -3.65351 TGATCGTGACGGAAA TGGCCGTGATCGA ACCGA CCGACGACGGCCT CGTCTTGCGAGAAAC 57 140 rnpB 4948622 .. 4948646 - -7.8 -3.07895 CCGACGGGCAATACA GGGTCTACCG TCTGT CGGTGAACCC GGACCTGCCCGACAT 56 406 ST40_RS22645 4945787 .. 4945798 - -7.2 -4.99043 TGTGGAGAAAGAAAA CCGC CTTC GCGG CGAGTGTATCAACCG 91 34 ST40_RS22640 NONE rsmH NONE ST40_RS22630 NONE ST40_RS22625 4941761 .. 4941771 - -6.8 -4.07687 AGCTTTTTCGGAAAA CCGA ATT TCGG CTGCGACCCCGCCGG 70 64 ST40_RS22620 NONE ST40_RS22615 NONE mraY NONE murD NONE ftsW NONE murG NONE murC 4932613 .. 4932624 - -3.6 -3.59738 CAGCAGATCGGGAAA CGCC ATGT GACG TCCTCCTTAAAGCTC 51 32 murB NONE ST40_RS22580 NONE ST40_RS22575 NONE ftsA NONE ftsZ 4926549 .. 4926574 - -16.9 -3.64703 GTTCCGCTACGGAAA CAGCCCGGAGC GTGA ACTCCGGGCTG TAACGATCAGGGAAG 100 57 lpxC 4925369 .. 4925391 - -15.6 -5.07652 CCGCCGAAAAGAAAA CGGCCGCTTC ATC AAAGCGGCCG ATCAAAATTATATCA 100 38 ST40_RS22555 4924224 .. 4924250 - -10.1 -2.72144 GGATGCTCCTTAAAG TTCGGCCCACC ATATA GGAGGACCGAA GCGTCTTGAAAGAGC 64 102 recN 4922470 .. 4922480 - -3.2 -4.13767 TTTCTCATTTGAAAA CTGC ACC ACAG GGCGGGAGCTTCGGC 58 82 ligA NONE ST40_RS22535 4919301 .. 4919317 - -5.1 -3.66666 CGCAAAAGTGTCAAA CCAGTTT AGC AAACAGG TCGTCCCAGTTTGGA 58 4 ST40_RS22530 4916335 .. 4916371 - -8 -3.31144 TGTCGATCTCTAGAA CGGCCCCAG-GCGCAAAG TGT CTCAG-GCTCTGGGGCCA ATCCAAGAATACATC 62 122 ST40_RS22520 4914561 .. 4914595 - -20.2 -3.30441 GACCACTGTGCACAA GAAAAGACCCGCCGAA AAT TTCGGCGGGTCTTTTT GTATCTGCAGTCAAG 100 166 ST40_RS22510 4912222 .. 4912247 - -13.3 -3.77773 CAAGAATTCAAAATA GGAAGGCCGGT CGAA ACCGGCCTTCA GGATCTTTTAGATCG 93 33 ST40_RS22505 4911124 .. 4911155 - -4.4 -3.16191 GGACACCTGCAGGAA TTCCG-CCTAGAGGA TTG TCCGCAAGGTCAGAA TTTCGAAGGTTCCGT 49 20 ST40_RS22495 4907328 .. 4907357 - -21.5 -5.09259 GACGCGAAAACAAAA GCCCGTGGAGCGG CAAA CCACTCCACGGGC TGACATCCGAACCGA 100 46 ST40_RS22485 4905178 .. 4905227 - -8.6 -2.81089 AGTGCAAACACAGGA TTTCCGGCGCCGGCCGGATCGCCGC CCT GCGGCG-TCCGG-CGGAG-CAAAAC GAGCTTATTGAACTG 57 54 ST40_RS22480 4901082 .. 4901092 - -8.2 -2.87564 CCATCCTTCGAGACA GCGC TGC GCGC TTCCTCAGGATGAGG 59 159 ST40_RS22455 4898269 .. 4898281 - -5.5 -3.6215 CGAAGTGAGCTGAAA CAGCC AGT GGCTA GACCGCGATCGGCGC 58 23 ST40_RS22445 4895585 .. 4895595 - -8.2 -2.87564 CCATCCTTCGAGACA GCGC TGC GCGC TTCCTCAAGATGAGG 59 78 ST40_RS22425 NONE ST40_RS22420 4891750 .. 4891762 - -3.4 -2.52676 GACGGGCTCAATTCA CGTT GGCGG AACG GATCATGTCGACATG 40 5 hflK NONE ST40_RS22410 NONE ST40_RS22405 4889155 .. 4889184 - -14.3 -3.72788 GTTCAGAATATAGAA CGGGCGGGAAG ATTTTGCG CCTCCCGCCCG AAAACTTTTCGTTAT 95 37 ST40_RS22400 4887528 .. 4887545 - -14.1 -5.75599 GAAAGCAGAAAAAAA GGGCGCC TCAC GGCGCCC TTCTGCTTTCAGCTT 100 57 miaA 4885101 .. 4885121 - -12.5 -2.57931 TTCAGGCCTTACAAG CGGCGGCGA ATC CCGCCACCG AACGCATGTTAGCCA 75 176 ST40_RS22385 4884462 .. 4884484 - -14.9 -5.42259 TCACTCTCAAAAAAA GGGACCGTG GCAGA CACGGTCCC GACGCATTTCCCGAG 100 63 ST40_RS22380 4883887 .. 4883908 - -5.7 -2.78216 GATGGCGACCAATCA CTCAGGCGA TCAA CCGCCCGTG CCAGGCTCCGGAGAC 50 13 ST40_RS22370 4882719 .. 4882736 - -14.1 -4.09685 CTGGATCCGCCAAAA GGGCCGC AGAA GCGGCCC CTTTTCAATCCGTGT 100 48 ST40_RS29720 4875020 .. 4875040 - -12.5 -3.02263 ACATCGCCGTCAACA CGTTGGCGC CTG GCGCCATCG AAACGGATTTCGGTG 81 271 ST40_RS22335 4873378 .. 4873412 - -9.9 -3.06399 TCTAATCAAATCAGA CGCTGCCCGGACGGTC AGAA GGCCGCCTGGGCAG-G TTCGTTCGCCTTGTC 67 5 ST40_RS22315 4868908 .. 4868922 - -2.7 -2.76261 TGCGAATGGTGAAAC CGGTG TCCAT CGCCG CCTCATCCCTGACTG 41 28 ST40_RS22310 NONE ST40_RS22305 NONE ST40_RS22300 4866282 .. 4866304 - -7.7 -4.09243 GACACGTCTGGAAAA CCTCCTGCA GGAAA CGCAGAAGG ACGACTTCGGCCTGG 71 465 ST40_RS22280 4862696 .. 4862721 - -9.7 -3.09831 GCCACGCCAAAACCA TGCAACCTGTG CCCA CACAGGCTGCT CATGAATACGGTTGG 67 71 ST40_RS22275 4861345 .. 4861403 - -2.8 -4.43844 TGACCACGTACAAAA CGGCCTGCTGGTCCCTGCTGGTCTGCCG CCG CTGCAGCCAAACAACGCCTATCATGCCG TGCTGTCGCACCGCA 66 119 ST40_RS22265 4859300 .. 4859313 - -3.8 -2.76671 ACACTCATCTGAAAC GTCC TTCCCC GGAC AGGATCCGGTAAGTG 43 1 ST40_RS22260 4858468 .. 4858503 - -14.9 -3.53224 CATGCTTTGCCCAAA TGCATTTCGCCTCCCC GTATT GGAGAGGCGAAA-GCA AGTCGGCATCGACGG 95 44 ST40_RS22255 4857468 .. 4857496 - -10.2 -2.68532 GGCAAACGGAGATGA TGGTGCGGGCAA TTTGT TGGCCCGCACCG TTTGCCTCAGGCAGC 66 32 ST40_RS22250 4856841 .. 4856887 - -18.7 -2.6252 GCACATGATAAGCCA TCCCACGTCATCCCGGCAGCG TTGTG CTCGGCCGGAATGACGAGGGA GAACTCCTGCACTCA 100 55 ST40_RS22210 NONE ST40_RS22205 4847952 .. 4847965 - -9.5 -2.57132 GGCTGGCTTCACAAT CCGGG GAGG CCCGG CAGGTCCGGGCGTGG 63 5 ST40_RS22200 4847250 .. 4847279 - -13.5 -5.02074 TCATTCCCGAAAAAA GCTTGAGCCCGCC GATT GACGGGCCCAGGC CAGGAAAACACTCGA 100 45 ST40_RS22195 4846118 .. 4846135 - -6.3 -3.53761 GAATGCCTCCCGAAA GACCTGT AACA ACAGATC TAACGGATCTCAGGT 57 158 ST40_RS22190 4845286 .. 4845300 - -6.4 -2.77043 TCTACGAGGGCAAAT CCATGC AAG GCATGA TCGACCTGGTCAAGC 50 211 ST40_RS22180 4843779 .. 4843795 - -2.1 -3.86822 GAACTGTTTCAGAAA GGCAGCG GAG CGTTGTC CGTCACTTCCTTCAT 52 2 ST40_RS22175 NONE ST40_RS22170 4841666 .. 4841680 - -3.4 -3.84825 TCGACCGATATCAAA CCTGGC TAA GCCGAG AGCGTGGCTGAGGCC 54 61 ST40_RS22135 4835221 .. 4835241 - -12.6 -4.64846 TCAGAAACGACAAAA GCCCTGGA GCATT TCCAGGGC TTTTTCTTTTTCAAA 100 63 ST40_RS22125 4832894 .. 4832928 - -7.7 -3.07787 AACAGCAGCGCAATA CCGAGAGGCCTGTGG CATTT CCACAGGCCCCGCCT TTCCTAAAGCTTGCT 57 29 ST40_RS22105 4828795 .. 4828826 - -12.2 -2.84125 GCTACACACCCAAAG CGACAGGGCCGCGAG AAC CGCGCGGCAC-GTCG GATGGCGGGTGTATA 72 70 ST40_RS22100 4828300 .. 4828311 - -2.2 -4.43477 GGGATGCAAGCAAAA CG-GG AGG CCGCG CACAAAGAATGCGCG 62 429 ST40_RS22090 4825415 .. 4825428 - -2.3 -4.07885 GACCTGGCGCGAAAA CGAAG GCAT CATCG TGCAGGACAGCCGCA 56 371 ST40_RS22065 4819987 .. 4819997 - -2.4 -4.16284 ATATCCGTTAAGAAA CGGC CCT GACG TTCTGCTGTTCGCCC 56 7 ST40_RS22060 4819245 .. 4819259 - -5.6 -3.06133 CAACTGGTCAGGTAA CCGGCT TTC AGCCTG CCCCGGAAAACGGAC 50 66 ST40_RS22055 4818877 .. 4818899 - -12 -3.69842 AGGTGAAGATAAACA TCCCTCCTCC TCA GGATGAGGGA GATCCTTTGGCTCGG 83 113 ald 4815900 .. 4815921 - -15.9 -5.74122 GAGTAGATAAAAAAA GGCCGGTTC CTCC GAACCGGCC TTTCTCATTCTGTAG 100 51 ST40_RS22000 4809796 .. 4809806 - -2.6 -4.35327 GGATTAAAAACTAAA TTTT TGA AAAA AGTGACAATCCCCTT 60 196 ST40_RS21995 4808596 .. 4808626 - -6.1 -3.86897 TTGAGGTTTGAGAAA GTGACAGACGCCT GTTGA AGCCATCTGTCTC GGGATAGGCGTCCGG 63 120 ST40_RS21990 4808271 .. 4808296 - -20.5 -4.43911 AAATTCGAACGAAAA GAGCCGGGCGA CGGA TCGCCCGGCTC TTTTTCAACTGTTCG 100 45 ade 4795651 .. 4795677 - -7.2 -3.35349 AAAGAAGCGGCAGAA GACAGCCACGCG CTT CACCTGGCCATC CTGTTTTTTGTAGCT 56 524 ST40_RS29715 4795401 .. 4795415 - -4.2 -3.69323 TGAGGATCATCGAAA GACCTG TTT CAGCTC CCCTGATCCACCAGT 55 19 ST40_RS21935 4793989 .. 4794021 - -7.7 -3.57144 GCCTTTATCCTGAAA TTTCGTGATCCGGAC AAA ATCCGTACCGCGAAA TGGTCCTCCTCAAGG 62 242 ST40_RS21930 4792254 .. 4792273 - -15 -3.14344 CAGTGTTTTCAGGAA CGGAGCGC TCAG GCGCTCCG GGCTTCCGCCGCCGC 91 14 ST40_RS21920 4790549 .. 4790569 - -3.1 -3.59979 CGCCGCGAGGCCAAA CGCGGCCAG AAA CTGGCAAGG GCCTCGGACGGACGC 51 110 ST40_RS21910 4788813 .. 4788841 - -5.1 -3.94188 AGCGAGTGCAAAGAA CGTCCGGCAGGTG CAC CACCCGGATGACG CCCTACCGCTTGTAC 63 28 ST40_RS21905 NONE rimK NONE ST40_RS21895 4785864 .. 4785877 - -3.1 -3.34398 TTCCCTTGGGAAATA TCCACG CGC CG-GGA GCGCCGGTTTTGTTC 47 249 ST40_RS21890 4783488 .. 4783506 - -8.8 -4.78848 GCCTGAAAGATAAAA GGCGCC TCGAAAG GGCGCC TTTTTCAGTTTCCGT 93 40 sbmA 4781993 .. 4782020 - -15.6 -4.72272 CGCTTTCAGGAAAAA TGCCGCCCGATC AATC GACCGGACGGCA GTTCATCATCTGCAA 100 65 ST40_RS21880 4780748 .. 4780787 - -9.2 -2.70932 GCTTGTCCGGAATGA CTGGGGAAGAC-AGCGGGC CCC GCCCTCTTGTCTCCCCCCC TACGAACGCGAGGGC 60 25 ST40_RS21865 4778721 .. 4778733 - -5.5 -4.13282 AGTAGATGCCGAAAA GGCTA CGT CAGCC GATCTTGAGACGGGC 65 20 thiD NONE ST40_RS21855 4776729 .. 4776739 - -6.8 -2.59797 CTCGCAGAAAGAGAT GGTC TAA GACC GCACTCCATTCCTTG 51 63 ST40_RS21850 4774852 .. 4774881 - -20.1 -3.25088 GTCCAAAGTCATGAA GAAAGGCCGGAGC ATAT GCCCCGGCCTTTC CTGAATGGCTGATTT 100 47 ST40_RS21840 NONE ST40_RS21835 4771852 .. 4771866 - -2.7 -3.83026 TGTTTTCACAGGAAA GCGGG CAGTT CCAGC GGGAACTTGTCTTGG 54 95 ST40_RS21830 4770625 .. 4770636 - -5.8 -3.94846 CGACGAAAAGGCAAA CAGG ACTG CCTG GCCCGGTCTCCTCCA 65 101 ST40_RS21825 4768617 .. 4768634 - -9.8 -4.58663 AGGATTTTCGAAAAA GGCGCC CGTTGC GGCGCC TTTTTTGTTGCCTCT 91 363 ST40_RS21815 4765750 .. 4765760 - -5.4 -3.63744 GCTGCGCGCAAAATA TGAC GCG GTCA ACATCAAGCTCGACA 57 415 ST40_RS21800 NONE ST40_RS21795 NONE ST40_RS21790 NONE ST40_RS21785 4759186 .. 4759222 - -6.5 -2.76361 CATCAAGCAGACAAG CGCACACCGGAGAACGA GGA TCATTCTCCGCCGCATG AGAGCCGGAGGCAAC 52 84 ST40_RS21780 4757380 .. 4757392 - -5.5 -3.07113 CATGACGCTAGCCAA GCACA TGC TGCGC TCAGGTCTTCACAGC 49 165 ST40_RS21770 4755727 .. 4755756 - -15.7 -3.96618 TCGAACTCCAAAGAA TTGCCGGACGGTG GCCA CACCGCCCGGCAT ACCTTTCATCAGGCC 100 34 ST40_RS21750 4751630 .. 4751640 - -6.8 -4.28254 CTTGAAGATGCAAAA CGGT TGT ACCG TCAAATGCAATTCAC 74 501 ST40_RS21735 4744739 .. 4744757 - -8.8 -3.66178 CGCCCCAAGCCCAAA CACCCGGT TAA ACCGGTTG CTCAAACCGTCCCTT 70 173 ST40_RS21730 4744228 .. 4744238 - -6.8 -4.15006 AGATTTACGGCAAAA GGTC AAG GACC GTGCCATTTCCACGC 70 79 ST40_RS21725 4743781 .. 4743818 - -24.3 -3.87815 CTGTACCTGGACAAA CCAAAACGCCCGCCGGA GTGA TCCGGCGGGCGTTTTGT TTGAAATCTTGTCTG 100 52 ST40_RS21715 4741421 .. 4741434 - -2.4 -3.01712 TGTGCGCCCGGAACA CATG CACCGC CATG ACAAGGATCAATCGG 42 33 ST40_RS21710 4740629 .. 4740680 - -7.8 -3.80461 CAATGGAGTACGAAA TTGCGGTCCCGTTCGTCGACC-GCT TCA AGCAGGACGGCGATCTTGACCGCTA TGCCCGCGACTATGT 67 292 ST40_RS21650 NONE flgK NONE ST40_RS21640 4723485 .. 4723510 - -6.7 -4.35682 GGATAATGAAAAGAA CGCGCCGTTGCC AAA GGCCCCGGCG-G CAAACCGGTTGGAAC 74 194 ST40_RS21635 4723094 .. 4723111 - -7.7 -4.11216 CTGCGAGCGGCAAAA CTTGCGC TGCA GCGCAAA ATGTCATTCAGCGGC 74 29 ST40_RS21630 NONE ST40_RS21625 NONE ST40_RS21620 4720232 .. 4720264 - -19.9 -3.44844 ACGATAGAAGATCAA GAAAGGCCGCCAGGG TAA CCTCGGCGGCCTTTC TCTTGACTGCAACGT 100 230 ST40_RS21570 NONE ST40_RS21565 4709787 .. 4709798 - -7.2 -3.09273 CGGGCGCAATATATA GGCG GTTC CGCC AGCGGACAACGGTTC 57 139 dksA 4709254 .. 4709272 - -10.3 -5.77988 ACAGACATAAAAAAA CCTTCCC ACGAG GGGAAGG TCTTGAAAGTCGTTA 100 83 ST40_RS21520 NONE fliM NONE ST40_RS21510 NONE ST40_RS21505 4698342 .. 4698354 - -6.2 -2.75343 GCGATACGCCGAAAT CCGG TCTTT CCGG TCAGTTTGACGGAAT 50 26 ST40_RS21500 4693862 .. 4693882 - -8.9 -3.28712 GGTTCTTTGTGAGAA CGTGCGGCG GAT CGCGACACG TGTGGAAGGTGAACG 65 115 ST40_RS21495 4692661 .. 4692678 - -9.8 -3.61517 ACTCTGTTCGAAGAA GGCCGC CTTGAT GCGGCC ATCTGGCTGATCAGC 73 335 flgB NONE flgC NONE ST40_RS21465 NONE fliQ 4687216 .. 4687226 - -2.4 -3.15544 CTGGATGGTCATGAA GGTC CAC GTCC TAACCAGTGGTCAGG 42 25 fliR NONE flhB NONE ST40_RS21445 NONE ST40_RS21440 4682010 .. 4682060 - -5.6 -3.55801 ACCAATGCTGCCAAA GACGGACATCAGCCGCCG-CCAGGA TGCT TCCTGGTCGAAAGCTG-T-TCCATC CTTGCCCGGAGCGCC 55 221 chrA 4680466 .. 4680493 - -2.4 -3.67517 GACCAACATTTGAAA TGGCCAGGCAGC TTTT GCAGGCAGGCCT GTTCGAGGGATTGCT 49 306 ST40_RS29710 4679205 .. 4679223 - -3 -2.90075 TCGGCGTCAAGGACA CCGGCAGT CTT ATTCCCGG TCATGGTGGCATTCT 40 245 ST40_RS21385 NONE ST40_RS21380 4670970 .. 4670980 - -3.2 -3.63805 ACTGCAGACGCCAAA GACT ATC AGCC CGGCGACGTCGTTTC 51 240 ST40_RS21370 4668607 .. 4668622 - -5.4 -2.65774 GATACCTACTACAAT CCG-GAC TGG GTCACGG CGAAGTTCGGCGATA 46 139 ST40_RS21355 NONE ST40_RS21350 4664306 .. 4664339 - -15.4 -3.78597 ACCCATGAAGCCAAA CAG-AGACGAGCCCC GACCG GGGGCTCGTCTGCCG TTTTGGTGGTCGACG 100 44 ST40_RS21325 4659094 .. 4659141 - -12.6 -3.48276 TGTGGCGTTACAGAA GGCCGTGACAG-GGGAAACGGGC ACG GCCTGGATCCCGCTGTCCCGACC TTCCGCAACACTCGA 79 492 ST40_RS21305 4655206 .. 4655243 - -3.4 -3.6393 TGGAGGACACAAACA TCGC-CTTTC-CGTCGGC AGTT GCCAACGTGATTGCGCGA CTGAACGCCACCTGC 51 151 ST40_RS21290 4652818 .. 4652829 - -4.4 -3.76224 TGTCGATCGAGGAAA TCTC AGCC GAGA TCGGATATACCGAAC 57 284 ST40_RS21280 4650578 .. 4650593 - -2.5 -3.54935 GAAATTCCGGCGAAA GCGTCG TTGTT CG-CGC GCTTCTCTGATCCGT 47 137 ST40_RS21275 NONE ST40_RS21270 NONE gstA 4647760 .. 4647778 - -3 -2.5805 ATGATTGTTCAGAAT TGGTAGGT GGA ACCAGCCA GACGATCCCCGGTAT 40 376 ST40_RS21225 4639564 .. 4639577 - -5.9 -3.70902 TTTCTGACAGGCAAA CGCGG CGAG CCACG GATGGTTGCGAGGAT 60 40 ST40_RS21220 4638660 .. 4638672 - -3.3 -3.41587 GGCTACAAAAGCCAA CGTGC TTC GCACC CCGTCATCCCATCAG 47 29 ST40_RS21215 NONE ST40_RS21210 4637154 .. 4637193 - -9.2 -4.63218 CGGCCCGCAATAAAA GTGATCCCCTTGAGCCGC TTGC GCAGATCAGGGGGACAAC TCGGTGGCTCAACCC 89 34 ST40_RS21205 NONE ST40_RS21200 NONE ST40_RS21190 4633531 .. 4633574 - -23.2 -3.32844 GCTGTCAGTCTAGAA CCAACTAGCGGCCGGGAGCA AAAC CGCACCCGGCCGCTAGTTGC TGTTATCCGCGCAGG 100 28 ST40_RS21185 4632148 .. 4632160 - -6.2 -3.21218 ACGTCCGACCAGGAA GCCG TTGCC CGGC GCCTTGGCTTGTCGC 50 326 ST40_RS21175 NONE peaA NONE peaB NONE qhpC NONE peaD 4625253 .. 4625295 - -9.9 -3.17051 TCGCCACCAGGAATA CCG-GGTCCCGATTTGCCGC TGAC GCAGCAAACCGGGACGACAA CCGGGATCCTCGCAG 68 54 ST40_RS21150 NONE ST40_RS21145 4622661 .. 4622673 - -4.8 -3.61089 TCGCAACAATTACAA CCTC GTCCT GAGG AAACGCCAAGCGCTG 52 85 ST40_RS21110 4614308 .. 4614319 - -7.2 -3.20747 AGGAAAGCGTATGAA GCGG CGAC CCGC AAGCTATTGGCCGGC 54 490 ST40_RS21095 4613051 .. 4613089 - -19.7 -4.09864 AGTCAGTCTTGAAAA TG-ACGAGGCGTGGCCGG GTTT CCGGCCACGCCTCTTTCA TGACGGCCTACTCCG 100 108 ST40_RS21070 4605842 .. 4605884 - -10.7 -4.62336 ACTGGACCCCAAAAA TTCT-CCGGGCTTTCAATCC GTTT GAAGTGAAAGCCCGGCAGAC TTGTCAGGACGGTTT 95 29 recA 4602346 .. 4602374 - -18.2 -4.67038 TCCCGAAAAGCAAAA GGCCCCCTTCCG GAGTG CGGAAGGAGGCC CTTGGAAGACCGGAC 100 83 alaS 4599370 .. 4599392 - -14.1 -3.89354 GCCTTAAACGAACAA GGGCGGCCC TGATG GGACCGCCC TTTTCAATTTTGATT 100 54 ST40_RS21045 4597095 .. 4597121 - -2.9 -3.88291 CAGCATCGGCACAAA CCGT-CCACGAG CCCT CCCGCGGCACTG CCGAGCGCAAGGATA 54 375 ST40_RS21010 4591007 .. 4591021 - -7 -3.06133 CAACTTTGCACTGAA GCCCGG TTG CCGGGT GCCAGTGTTCACACC 52 254 ST40_RS20995 4587448 .. 4587487 - -4.4 -3.87815 CGCTACTCGCAGAAA GCC-CCGTCGAAGCCTCTG ACCAG CAG-GCCTTC-ACGGAGGC GCTGACCGTGGAATG 59 134 ST40_RS20980 4585427 .. 4585458 - -16.6 -4.05446 CGTCGGAACGACAAA CAAAAAGGGCGGCC CCAA GGCCGCCCTTCGTG ACTTGATTTCGGCAA 100 53 ST40_RS20965 4582766 .. 4582784 - -5.9 -3.15544 GCTGATTTTCAGGAA GGCCCGC TGACC GCAGACC TCGACCGGGTGTTCA 50 466 ST40_RS20950 4580895 .. 4580915 - -18.3 -4.8622 GCTGGCAACGAAAAA GGGCGGCTC ACC GAGCCGCCC GTTTTTTTACCGACG 100 45 ST40_RS20925 NONE murI 4572708 .. 4572750 - -9.8 -3.57144 GCCTGGATGTCGAAA GCTTCTATGAACCCGAGCAC CGG GAACGCGGCTTCATCGAAGC CCAGGACCGCTTCGG 73 400 rpsD 4569972 .. 4570000 - -21.1 -4.09243 CATAGGCCGGCAAAA GAAAAGGCCCGCC AGA GGCGGGCCTTTCC GTCAAACCGTATTCG 100 48 ST40_RS20880 4562143 .. 4562167 - -14.2 -3.01726 TCCTCCCAGAGAAAT TGCCGGCCGG TTGAC CCGGCCGGCT GTTTTGTCAGTGTCT 91 48 ST40_RS20875 NONE ST40_RS20870 NONE ST40_RS20865 NONE ST40_RS20860 4558071 .. 4558086 - -2.5 -2.87051 GCCGGAGCAGGAAAC CCGAA AGGTCA CTCGG CAATGTCGAAATGCT 40 18 ST40_RS20855 4557060 .. 4557073 - -9.5 -2.84527 CAAGGTGGATCAAAC GGCGG CTGA CCGCC CCGGAGTTTTCCTCA 64 38 ST40_RS20850 4555990 .. 4556024 - -7.7 -4.4767 GTATTGACCAGAAAA GACAGGCCGGGA-GGG TTTC CCCGTCCCGGTCAGAC AGAGGCGCGAATGAG 79 20 ST40_RS20835 NONE rhaS 4550280 .. 4550304 - -17.2 -3.53012 GTTGCTGGTTTCAAA GACCCGGTGC GCTTG GCACCGGGTC TGACATGTTTCTATC 100 61 ST40_RS20825 NONE ST40_RS20820 NONE ST40_RS20815 NONE rhaM NONE ST40_RS20805 NONE ttcA 4543428 .. 4543442 - -3.4 -4.11216 TCCTCACCGCGAAAA CCGGCG GTT CAACGG GTGGAAACCTGGCTG 59 522 ST40_RS20790 NONE ST40_RS20785 4540000 .. 4540019 - -10.6 -4.07885 CACGCTTGCGGAAAA GGGGCCGG CCAG CCGGTCCC TTCGCCATCTCCAGC 86 75 ST40_RS20760 4535878 .. 4535896 - -5.2 -3.8591 GGGGACAATGAACAA GATTGCAG TTG CTGCCACC TCCACTTTCGTTCTG 59 438 ST40_RS20750 4535288 .. 4535306 - -4.4 -3.73775 GGCAGCGGCATGAAA CGACCGGG ATC CCTGACCG CAGGTGGCTCTCCGA 55 136 ST40_RS20730 4530404 .. 4530424 - -6.2 -2.89742 CTCAAGCGTCAGACA GATATTGC TCTTG GCAACATC CTTGGCTCCAACCTC 48 357 ST40_RS20705 4526505 .. 4526540 - -14.8 -4.25859 CGGAATTGAAAACAA GGATGCCGGACACG GGCTGCAT CGTGTCCGGCATCA ACAAAGACTCGCCAG 100 85 ST40_RS20695 4524950 .. 4525000 - -9.1 -3.60627 TCACTTCAGCCGAAA GCTACTG-GATCCCGGTCCTGGCGC TTT GCGCCAA-ACCGGGATGACAAAAAC GGGGGCTCGTGAGGT 68 57 ST40_RS20660 4521245 .. 4521266 - -18.7 -5.45802 CCGTCAAAACAAAAA CGCCCGCCG TTTC CGGCGGGCG TTTGAAACTGACAAT 100 56 ST40_RS20655 4520161 .. 4520176 - -3.3 -3.62616 GATTATGAGACATAA TCAAC TTTGTC GTTGA AGCTCAGAACCGTCG 51 119 ST40_RS20650 4519396 .. 4519406 - -2.4 -4.36914 GCTGGCGCGACAAAA TGCC GAC GGCC CGCGTCGTGAAACAG 63 488 ST40_RS20620 4515134 .. 4515148 - -6.4 -3.29144 TGAGGCCTTTCAGAA TCCAGC CTA GCTGAA ACGGCGGCCCGGCAC 54 17 ST40_RS20590 4508223 .. 4508267 - -4.9 -3.52918 GAAGTGGCAAAGGAA GCGG-GCATGAGCCAGACGCC TTGCT GGCGCC-GGATCAAGCGCCTC AAGGAACAGGGAATC 52 398 ST40_RS20580 4504413 .. 4504432 - -12.8 -5.82281 AAAGACATAAAAAAA CCGGCACC CTGC GGCGCCGG TTTTTTTGCTGTTCC 100 51 ST40_RS20570 4502516 .. 4502543 - -9.8 -4.40561 GGCGCTGAAAAAGAA GAGGCCCGATCC TTTC GAACCGGGCCTT ACATGCAGGCAGGAG 88 59 ST40_RS20565 4499940 .. 4499952 - -5.5 -2.80511 CCGAGAAGTGAAGCA CACCA TTA TGGCG GTCTCGCCGCAAGTC 47 70 ST40_RS20560 4499298 .. 4499310 - -2.6 -4.37092 ACCTGGCGCACAAAA GCGA ATAGA CCGC CCCTCACCCTGTTGC 60 49 ST40_RS20555 4498130 .. 4498141 - -5.8 -3.7941 TATTGCCCAGAAGAA GACG ACGC CGTC TCCTTGGGCGAGGAA 63 161 ST40_RS20550 4496951 .. 4496976 - -11.7 -5.4477 AAAGCTCCAAAAAAA CGCGCCCGGCG CGAA CGCCCGGCGCT TTTCGTTTAGGTGAG 100 81 ST40_RS20545 NONE ST40_RS20540 NONE ST40_RS20535 NONE metF 4493124 .. 4493142 - -4.4 -3.51934 TCCTGTCCAGAAAGA CAGCAGCG TGT CCCGGCTG CGCCGATACCCCCAA 52 144 ST40_RS20525 4492772 .. 4492787 - -3.2 -3.05384 GCCGGCGTGATTTAA CTGTGC AACC GGACAG CGTGTCAGCTGTCCC 43 30 metH 4488923 .. 4488953 - -27 -4.77775 ATTGGAGAAAATAAA TGGCCTCCCGCGTG CGA CACGCGGGAGGCCA TCTGTTTCCAGTCGG 100 58 ST40_RS20515 4488512 .. 4488527 - -11.8 -5.62045 ACAGATAACAAAAAA CCCGGC CGAA GCCGGG CTTTGTAAGGAAGTG 100 118 ST40_RS20505 NONE ST40_RS20500 NONE ST40_RS20495 NONE ST40_RS20490 4485507 .. 4485523 - -3.5 -2.59447 CGGCAAGCACAATAT GCTCCGG CAC CCCGTGC CGCGGGTGAGCGCAA 42 84 ST40_RS20485 4483935 .. 4483955 - -9.7 -2.73243 ATGTACCGTCGAAAC GGAAGAACG CAT CGTGCTTCC TTGCCGTCCGGTGGC 57 372 ST40_RS20470 4480620 .. 4480642 - -12.7 -5.66684 GAACCGACAAAAAAA GGGAGCCGC GAGGG ACGGCTCCC TTATCCGTTTCCCGT 100 121 ST40_RS20465 4479382 .. 4479399 - -4.1 -4.15044 GCCTGGCCGAACAAA GCCTTCA CGTG TGAAGGG ACCGGGGCTTACCCG 60 171 ST40_RS20460 NONE ST40_RS20455 4477779 .. 4477801 - -4.1 -4.46212 GCCTCGACTAGAAAA CCGTTC-GGC TTCC GCTTGAACGG AAGCCGTTCCCCCAC 66 522 ST40_RS20440 NONE ST40_RS20435 NONE ST40_RS20430 NONE xrtT NONE ST40_RS20420 4470029 .. 4470056 - -9 -4.56597 TCTCTTCCCGAAAAA TGGCCCCCGCAG TTGC CTGCGGGAGCGT TACCAATAGCGAAGC 89 46 ST40_RS20415 NONE ST40_RS20410 4467568 .. 4467584 - -5.8 -3.65812 GCTGCCGGAATACAA GACCGA CACGT TCGGCC TCTATGCACTCTACC 57 101 ST40_RS20400 4465940 .. 4465983 - -11.1 -3.15544 CGGTACCTTCAGGAA CGCCAGA-C-GCAGGCCCTTG CTCG CAAGGACCTGCAGCTCCGGTG AAACGTTACGCGGCA 72 31 ST40_RS20395 4464109 .. 4464151 - -17.2 -3.33815 AGGCTTTCGAAGCAA GACTGAACGAACGCGGCGA ACGTTA TCGCCGC-TCCGTTCAGCC CGGCACGGGGACAGT 93 133 ST40_RS20385 NONE ST40_RS20380 4461404 .. 4461441 - -18.5 -5.00616 CCTGTGCTTAAAAAA CAAGAGACGGCGGCGAA AAAC TTCGCCGCCGTCTCCAA GTCTAAAGCTTCAAA 100 36 ST40_RS20370 4459117 .. 4459138 - -17.3 -5.74288 ACAAACAACAAAAAA GCCGCCGGA GTTA TCCGGCGGC TATTTTCACCAAAGG 100 54 ST40_RS20365 4457794 .. 4457810 - -3.5 -3.3458 GAGGAAACAACGCAA GGCGGCC CGG GTCCGGC AAGATCAGCGACAAC 49 91 ST40_RS20360 4456575 .. 4456593 - -8.8 -4.09739 GGAACGGCTGGAAAA TCCGGCAG AGC CTGCCGCA CGGGCAGCAATAGGC 76 425 ST40_RS20335 4450142 .. 4450154 - -3.3 -4.17048 TTTCGTTCAAAACAA GCCGT TTG ACTGC GGTCACGTCCTCCGC 58 205 ST40_RS20330 NONE ST40_RS20325 4448303 .. 4448321 - -17.4 -2.61728 AGCGCGAACAGGAAC GCGCGGCC CTC GGCCGCGC CGAGCGCCAGTATCT 83 317 ST40_RS20315 NONE ST40_RS20310 4443887 .. 4443907 - -6.1 -3.63744 CCGGCCCTGAAAACA TGCATCGAC AGG GCCTATGCA CCGGTAAAATCAACC 57 501 ST40_RS20300 4442932 .. 4442963 - -10.8 -2.60244 TTCTCAATGAACTCA TCCCGAGAACGCAC TTAC GCGCGTTCCCAGGC CCAAGACGAACCGCT 66 67 ST40_RS20285 4439792 .. 4439850 - -9 -3.61764 TGAGGAAGGCTGAAA GCCCGTCTCGAAGGATGGGC--CGCTTGC TCCG GAATGTGTCGCCCATCCTTCGAGACAG-C ACTTAGTGCTCTCTC 70 132 ST40_RS20270 4436482 .. 4436500 - -6.7 -3.53444 TGACCTTTTCGGAAA TCGGCTCC TCAC GG-GCCGA TTGCCGCGTCGGCCA 58 424 ST40_RS20235 4428525 .. 4428535 - -4.6 -3.3482 GAACTCCCTAATCAA CCGG CAA CCGA ACCTGGGACAGTCAG 51 37 ST40_RS20230 4428042 .. 4428060 - -9.5 -4.67038 TCGCCAAAAGGAAAA GGCGCGC TTTCC GCACGCC TTTTTTTGTCATTTC 91 60 ST40_RS20220 NONE scpA 4422220 .. 4422235 - -4.6 -3.61398 CGGTGCCTGCAACAA GAGCGC GGCT GCGATC AGGCAAGCTGCTCAA 54 285 ST40_RS20205 4421629 .. 4421639 - -3.2 -4.16904 AAGATTAGACAGAAA CTAG CCG CCAG AACCACAAAAGTGCA 58 4 ST40_RS20190 4419453 .. 4419482 - -12.9 -3.93913 AAAGACAAAGGGAAA CGGCTGCGCTC AGTGGGAA AAGCGCAGCCG TTCCATGCTGCCGGA 93 79 ST40_RS20160 4412810 .. 4412830 - -5.4 -3.83026 GGTCGTCAGATGAAA CTCCC-CAC TCAG GCGTGGGAG AATTCCCAGTAGAGT 61 13 ST40_RS20150 4410167 .. 4410188 - -13.7 -5.65927 CAGCCAAACAAAAAA CCCCGACCT GTTC AGGCCGGGG TTTCGCAAAACGGGA 100 52 ST40_RS20145 4409449 .. 4409486 - -17.2 -4.24404 ACCGAAACGCCAAAA CAGCGGCTCTTCAACCC GGACA GGGT-GAAAAGCCGCTG ATCTGTCTCACAGTC 100 92 ST40_RS20140 4408445 .. 4408455 - -4 -3.05384 TTTGCTGCGATTGAA TCAT GGA ATGA CAAAAGGTCCGCGTG 45 47 ST40_RS20135 4407911 .. 4407938 - -4 -4.05495 TAATAAAAAGCGAAA CTTGACCACCTG CTCG CAGGTGGTTTTG TTTGAAAGCGTCAGC 58 44 ST40_RS20115 4405457 .. 4405467 - -2.4 -4.57569 TGATGGGCTGAAAAA GGGG TTG CGCC TGGTTCCGGTCATGG 66 368 ST40_RS20100 NONE ST40_RS20095 4401992 .. 4402005 - -5.2 -2.64099 CCCCGTCATGAGAAC GCCG TCCCAT CGGC TTCCGAAACGATCAT 46 2 ST40_RS20090 NONE ST40_RS20085 NONE ST40_RS20080 4399016 .. 4399036 - -4 -3.85698 TTTGGTCTCGATAAA GCAACACT ATACG AATGCTGC CTGATGGAAACCGTC 56 133 ST40_RS20075 4398383 .. 4398395 - -4.7 -3.33696 TGTGGTTCCAATGAA CGGCC AGA GGACG CCAGTTACTTCAGGA 51 30 ST40_RS20060 4395402 .. 4395413 - -4.4 -3.61398 GCTGGCGGCCAACAA GGAT CTCG ATCC GCAGATCAGAGGCCG 54 157 ST40_RS20040 4390153 .. 4390195 - -3.2 -2.9914 CAGCGCGGACAGATA GGGCGCAATGGTGCGGAAGA TGA TCGTACGCATCAGTGAGCCT CCCCAGTCTGGGCCG 42 15 ST40_RS20035 4389736 .. 4389775 - -2.9 -3.39784 CCACGGTGAAGAACA GGCCGATCAGGATGACAAC GCCG GTTTCCATCA-G-TCGGCC TCCCTTTCTTCAAGC 47 16 ST40_RS20030 NONE ST40_RS20025 NONE ST40_RS20020 4387317 .. 4387333 - -4.4 -2.76009 GAAAAGGTCTCAAAC GGTGTC ATCTG AACACC TCCAGGATCTTACGT 45 13 ST40_RS20015 NONE mnhG NONE ST40_RS20005 4385847 .. 4385866 - -13.6 -6.14618 TACAAAACAAAAAAA GAGCTGCC CATG GGCAGCTC TTTTGTACTCGACCT 100 53 ST40_RS19990 NONE ST40_RS19985 4381707 .. 4381723 - -9.3 -2.52464 CCGTCCGGCAATCTA GCCGGAC AGC GACCGGC CACTGACCATTTCCA 59 6 ST40_RS19980 4380941 .. 4380951 - -2.4 -4.07885 CATGCTGGGTGAAAA CCTG TCA CTGG AAAGACTGCGCGGCC 57 305 ST40_RS19970 4379581 .. 4379603 - -7.6 -4.85782 GCCGCTAAAAAGAAA CTTCTCCTGC GCG GCTGGAGAGG CTTGGACCGTCAGTC 91 35 ST40_RS19965 4378430 .. 4378441 - -4.4 -4.79949 TTGGTAAAAAAATAA TACC GAGC GGTA TCGTTTAAAAATTTT 74 271 ST40_RS19960 4376413 .. 4376444 - -7.2 -4.81083 TGCAATGATGAAAAA CGGTCAGGCCGGGAC GCT GTCACGCCCCGAC-G CCGCAACTGGTCACG 86 36 ST40_RS19940 4371802 .. 4371840 - -8 -3.47941 GACGAAGCAGCAGAA CCCGACCAATTGTCCGAC CCT GTCGGACTGCTGACCCGG CGCATGATGGCGTTG 62 420 ST40_RS19930 4370811 .. 4370840 - -12.3 -2.77523 TCGCGAGCAACATGA GGACGTTCA-ACGA AGG CCGTTTGAACGTCC ACCGTGACCGATGCA 72 48 ST40_RS19905 4365566 .. 4365592 - -12.2 -3.30124 TTGTATTCCTGAGAA GCACGCGTGCCT GCA AGGGCCGCGTGC TCTTGCATTATGGGG 78 46 ST40_RS19895 4363990 .. 4364002 - -4.8 -4.10453 GAAACCCCCGGAAAA TGCC TGGTC GGCA CCGTCATCCGGACGC 61 113 ST40_RS19875 4359988 .. 4360006 - -3.1 -3.65529 AGATTGTCACGGAAA TCTGGTT AACCA AACCCGA CTTTTGGATATTTAC 51 113 ST40_RS19870 4359612 .. 4359629 - -5.5 -4.18197 ACCCCTCAGTCAAAA GCCGTCA TGCG TGATGGC GAAGGACTCGGCCTC 68 70 ST40_RS19855 4357358 .. 4357380 - -16.4 -5.59962 GAAAACAAAGAAAAA GCCGCCATTT CAA AAATGGCGGC GTTTCAATTTCGTCA 100 63 ppdK NONE ST40_RS19835 4350301 .. 4350311 - -8.2 -3.25823 CGTTTCCGACATGAA CGGC AAC GCCG AAGCCGAGGCCATCC 57 356 ST40_RS19815 4346034 .. 4346048 - -4.2 -4.63542 GACAATCCGGAAAAA TCTGCA GAT TGCAGG CGAAGGGATGGATTA 71 174 ST40_RS19810 4344563 .. 4344601 - -21.9 -3.55444 TGCTCACCTCGGAAA CGGCATGGATGCCATGG TCAAG CCATGGAATCCATGCCG TAACCTCACCACACG 100 83 ST40_RS19785 NONE phnC NONE phnE NONE ST40_RS19770 4337050 .. 4337062 - -10.5 -2.64155 CCCGGTGGAAATCCA GCGGG ACG CCCGC GAATTTGCGGACCTC 60 155 ST40_RS19750 4331424 .. 4331434 - -2.4 -4.21275 TGAAGTGACGGAAAA CGTC TTT GTCG ACACCAGAGAACAGC 60 469 ST40_RS19740 4327842 .. 4327854 - -7.7 -3.60627 TCAGGTGAGCTTAAA GGTCA CTT TGACC AGAAATCCGGATCAA 62 15 sfsA 4326996 .. 4327017 - -5.7 -3.53761 TAACCGTGTGCCAAA CGGCACGCC GATT GTCGTGCGG CAGGCGTAACAGCTG 57 85 ST40_RS19705 4322292 .. 4322304 - -6.2 -2.87944 GATCAGCACACCACA GCGC GGCTT GCGC CTCCGGTGGCGTCAG 51 44 ST40_RS19700 4321049 .. 4321061 - -6.9 -3.14881 CAACGCGCTGAGCAA GGCAC TCT GCGCC AATGCGCCTTTGTCA 54 337 cysE 4319373 .. 4319394 - -8.7 -3.11634 CCCTACAGGAGCCAA CGGAAATGC CAAA GCCTTTCCG CAAGCTTTCCCCGTC 63 58 ST40_RS19685 4319046 .. 4319068 - -12 -5.04601 CGGAGAAATGAAAAA GGCGGCTC ACCAGAG GAGCCGCC TTTTCACTTTACGAT 100 56 ST40_RS19675 NONE ST40_RS19670 4317155 .. 4317177 - -14.1 -3.07935 ACCGGATCCAGGGAA CCGGCCCGC CCCCC GCAGGCCGG TTCCCGCCTTTTCAG 91 88 ST40_RS19650 4312784 .. 4312815 - -6.6 -3.29649 ACCGGACCAGATCAA CCGACGCTCAATCG GAAG CGATCAAACGTCAA TAGTTGATCGACCTT 56 224 ST40_RS19645 4312273 .. 4312292 - -13.6 -5.27938 ACGTCGAAACAAAAA GGCTGGCT GACA AGCCAGCC TTTTTCATGTCAGGC 100 35 ST40_RS19600 4305585 .. 4305598 - -5.9 -3.13177 ACATGGGACACTGAA CCGCG GTCA CGCGA CCACGCTGTCTTCCT 52 18 yidD NONE ST40_RS19590 4302883 .. 4302906 - -3 -4.18197 ATCGTCCAGGCAAAA CCCGGCGC TGTCGAAT ACGCCGGT TCAAATTATGCACTC 60 473 ST40_RS19580 4301871 .. 4301884 - -8.1 -2.64155 CGGCCCGGAAACGCA GGCCT CAAG AGGCC TTCTCAGCCACAGCC 56 16 ST40_RS19575 NONE ST40_RS19570 4299021 .. 4299039 - -3.8 -3.54408 CGGGATTCAAACTAA TCCGGCAA CCT TTTCCGAA GCATTTCCCTTGATT 51 58 thrS 4296900 .. 4296923 - -15.4 -2.63102 ATGATTGTGACAGCA CATTGCCCTG ATGC CAGGGCAATG TGCAAGCTGTCAGAT 83 65 ST40_RS19560 4295952 .. 4295992 - -6.7 -3.05844 CCGGCGACTTTAAGA TCTGACCGGGTAGCGACGT CTA ACGCCGCCGGCCGAGCAAA CGCCGGGTCCGTGTG 54 4 ST40_RS19550 NONE ST40_RS19545 4293222 .. 4293254 - -18.5 -3.41878 GTCGGCAAGTCACAA TAAAAGGGCGCCGAC TTT GCCGGCGCCCTTTTT GGTCATGATCGTTCG 100 49 ST40_RS19540 4291481 .. 4291491 - -4 -4.17316 ATGGCGGTAAAACAA TCTT CCC AAGA GTCGAGTGTGAGTCT 60 166 ST40_RS19535 4290049 .. 4290071 - -9.9 -3.2281 AAATCAGGAACTGAA GAACGGCAA GTGCA TCGCCGTTC GGCAGGAGACACCCT 65 267 ST40_RS19470 NONE ST40_RS19465 4273704 .. 4273758 - -18.1 -5.52023 AGGAGCAATAAAAAA GCCGCCGA-CCGAACCGCATGA CGGGAGGAATTC CCATGCGGTTCAGATCGGCGGC TTTGCCTGTGCACCC 100 273 ST40_RS19460 4272198 .. 4272226 - -11 -4.98255 GTCGAATGAGAAAAA CGAGCGGCGG GGCTGCAGA CCGCCGCTCA AGTTTGGGGAAGATC 100 39 ST40_RS19455 4271051 .. 4271062 - -2.2 -2.94161 GAAATTTCCAGAAAG GACA TATC CGTC TCCTTAGCGATTGGC 40 29 ST40_RS19450 NONE nirB NONE nirD NONE ST40_RS19435 4265574 .. 4265604 - -19 -4.07568 GGCTCCTCGGGAAAA GACGCTCCGCCGCC AAT GACGTCGGAGCGTC GCACTTATTCGGCAG 100 30 ST40_RS19430 NONE cynS NONE ST40_RS19420 NONE cysG NONE ST40_RS19410 4257943 .. 4257964 - -2.3 -5.47218 TTGCATGCAAAAAAA CCGGA-CA GGATTTA TGCTCCGG AAGGCCATTTTGAAA 85 461 ST40_RS19400 4256534 .. 4256558 - -18.6 -4.62772 TTCAAAGGAAAGAAA CCTCCCGCGG GCCTG CCGCGGGAGG TGACATCATCAATCT 100 34 ST40_RS19395 4255591 .. 4255601 - -2.4 -3.85698 TCGCTGGTTCAGAAA GGGC ACG GCTC TTCCTCAGACTTTCT 52 30 ST40_RS19390 NONE ST40_RS19385 4251681 .. 4251694 - -3.8 -4.36914 CTGCGGGCGATAAAA TCGG GTGATG CCGA ACTCTGCCGCATGAT 65 143 ST40_RS19355 4243801 .. 4243821 - -2.3 -4.09685 CTTTACTTTTGAAAA GCCTAGCCG AGC CCGCGCGGC ATTGAAAGAGCGAAA 56 73 cyoA 4242782 .. 4242795 - -3.7 -3.78775 CGTCCCAGCATCAAA CAGCC CCCC GGCAG ATGAGTTCGGCGGCC 56 7 cyoB 4240743 .. 4240758 - -4.7 -3.53012 GGCCTCTCCCTCAAA CCGTT CCGGAC AACGG TGCGCCAGAGGCGGC 52 5 cyoC NONE cyoD NONE ST40_RS19330 4239466 .. 4239476 - -4 -3.07043 CCGACCAGTGGAACA GATA TAT TATC GGTCGTCATTCCACG 45 31 ST40_RS19325 NONE ST40_RS19320 4237044 .. 4237055 - -3 -3.68071 GAAACTGGGAAAATA TTCA AATC TGAA ATTTGTAATCTCGGG 51 137 ST40_RS19315 NONE ST40_RS19310 4234914 .. 4234926 - -7.7 -3.14881 GAATTTCCGGAGCAA CAAGG GAA CCTTG AAACAACATTCACGC 57 74 ST40_RS19305 4234623 .. 4234668 - -12.8 -2.69799 CGATTTTAGAGAGGA CGTCGGCCTTTAACGCGACGGT GAAA ACCG-C-CGTTAAAGGCCGAAA AGATTGGGTCAGCCC 75 34 ST40_RS19300 NONE ST40_RS19295 4233441 .. 4233451 - -2.4 -3.96148 TTCGTGCAGGAGAAA GCTG GTA CCGC CCCTTCAAATAGAGA 54 340 ST40_RS19285 4231237 .. 4231263 - -3.6 -3.90291 AGCTTTTGAAGGAAA GCGCGCCAGCC GAAATT GGC-GGCATGC CCATTGCACTCGACC 56 50 ST40_RS19280 NONE ST40_RS19275 NONE ST40_RS19270 NONE ST40_RS19265 NONE ST40_RS19260 4221639 .. 4221666 - -2.8 -2.64773 GAACTCAATAAAATG GTTCTCGTGCTCT CAG ACAGCA-GAAAAC AAACCTGCACAGAGT 40 146 ST40_RS19255 4220507 .. 4220524 - -4.1 -3.67775 ACCGCCACCTAAGAA CCAGC ATAACTCA GCTGG ATCAGATCCAAGACC 53 1 ST40_RS19250 4219696 .. 4219721 - -8.3 -2.60685 CAAGCACATAGCAAG CGCCCAATCCA GCTA TGGATTATGCG TCCTGAAATATGTTG 56 12 ST40_RS19240 4217650 .. 4217667 - -4 -4.25104 TGGCGCGGATGAAAA TGGGGC TGTAAG GCCCCT CTCCTTTCACCATCC 64 44 ST40_RS19220 NONE ST40_RS19215 NONE tuf 4213739 .. 4213774 - -12.5 -3.15503 TCGCAAGACTTAAGA GGCGGGACTGCCGGGC ACAAG GCCCGGCAG-CCCGAA ATCATCTTATTCGAT 81 32 ST40_RS19205 4213514 .. 4213553 - -18.1 -3.53012 TTCCGGTCTGTTAAA TACGAGTG-GGCGCGCGAA AAAC TTCGCGCGCCTCACTCG-A GGAAACTCTTTAAGC 100 69 secE 4213266 .. 4213281 - -8.2 -3.53012 TTCTTTGTCTTCAAA CCGGAC AGTC GCCCGG GCGGCTGACTGAAAT 65 40 nusG 4212543 .. 4212564 - -8.8 -3.18264 CTCTCCAGTCATTAA CAGCTGAA TGGCTC TTCAGCTG ATTGGGAGTTGGTGG 65 160 rplK NONE rplA 4211377 .. 4211391 - -7.1 -3.16055 GAAATCTCGTATCAA TCCGG AAAGA CCGGA TTATTCGCCAGCAAC 56 26 rplJ NONE rplL 4210049 .. 4210106 - -8.1 -4.24002 CCGGAAACGGGAAAA TCCCGCCGGGGCTAGGTACGGTCCCGG TTGC CCGGGACCGTTCAAAAGGCCGGTAGGC CTTTATTATTTCAGC 81 31 rpoB NONE rpoC 4201344 .. 4201369 - -19.1 -3.54475 TGCCTCATTATACAA GAAAGGCCGCC CGAG GGCGGCCTTTC GACAGTTCGACGGGA 100 47 ST40_RS19160 4200561 .. 4200597 - -2 -3.62597 GGCAGCGTTTAAGAA GACTGGGTCCTGCGCC TTGGT GGCGCTGGACGGGTTC GCACTTACCGCCTGC 50 447 rpsL NONE rpsG NONE fusA 4197382 .. 4197410 - -6.6 -2.75074 TTGACGTTAAGAGGA TGGGCTCAGGCG TATTT CGCCTGAACCTC TTCGGCGACAGCCTG 52 2 tuf 4196094 .. 4196146 - -10.7 -3.61398 TGTTGTTCCCAATAA GACTG-CGGGCCTGCCCGCG--TTTC ACTT GAAAGTCACCGGCAGGCCCGGCTGTC GATTATTCGATGATG 74 28 rpsJ NONE rplC NONE rplD 4194423 .. 4194437 - -3.4 -2.78679 TTTGCTCATTTAAAG CGCTCC TCA AGTGCG GACACCGCAGCCTTG 41 1 ST40_RS19120 NONE rplB NONE rpsS NONE rplV NONE rpsC 4191876 .. 4191891 - -6 -3.34895 GGCAGCTTGAATTAA GCTGCG CGCT CGCGGC CCCGATCCCGGCGTC 56 6 rplP NONE rpmC NONE rpsQ 4190938 .. 4190968 - -14 -3.06183 CTGATGCTCACTGAA TGGAGCGCGGTCAC TGA GCGACCACGGTCCA ACGTTTGTTTTTAGA 91 5 rplN 4190515 .. 4190527 - -6.9 -2.80816 TTCGCAGCCATCAGA GCACC TCC GGCGC GAGCGAAATGATTTT 52 8 rplX NONE rplE NONE rpsN NONE rpsH 4188892 .. 4188904 - -3.3 -3.04398 TCGTTGTTTTAAAAG TGAGG ATG CCGCA TCAGAAGACGCGGCA 43 26 rplF NONE rplR 4187938 .. 4187951 - -9.5 -3.01712 CTTCCGTTCTTAAGA GCGCC AACG GGCGC TGGTCAGAATTCAAG 67 29 rpsE NONE rpmD NONE rplO 4186599 .. 4186611 - -4.8 -4.15044 TGCTTGCCCAAGAAA TGGG TGAAG CCCA GGCTGTTAAGCCTGA 62 31 secY 4185235 .. 4185247 - -3.3 -3.8917 GTCCAACCAGAATAA GCCTC ATC GACGC CTCCCACTTAATTTC 54 16 ST40_RS19025 4184558 .. 4184576 - -16 -4.25104 TTGCGGGTACGAAAA TGCCGGGG TAA CCCCGGCA CAGAGAATGCCGGCC 100 94 rpsM NONE rpsK 4183616 .. 4183643 - -3.4 -4.07133 CATTTGGAGAAACAA GTACCTAAAGCT GGGA AGCCTTAGACGC GGCGACGCTTGCGCG 56 18 ST40_RS19010 NONE rplQ 4181970 .. 4181989 - -15 -5.94214 AAGACAACAAAAAAA GGCGGGCA AATC TGCCCGCC TTTCCCGATTGCCAT 100 52 ST40_RS19000 4179592 .. 4179642 - -24.3 -2.84218 TAGGGAGGAAAAGAG GCA-AATACAAAAGGGGCCGCCGG ATTT CCGGCGGCCCCTTTTTCATTATGC AGGCTTACTTCAGGC 100 35 ST40_RS18995 NONE ST40_RS18990 4176734 .. 4176753 - -4.2 -3.79787 TGACATCAACCGAAA CCGCCTGA TCTT TCAGGCTA CTCGGATCAGCCTCG 58 32 ST40_RS18980 NONE ST40_RS18975 NONE ST40_RS18970 NONE ST40_RS18965 NONE crcB 4169930 .. 4169940 - -2.4 -2.71791 ATGTTTTTCTCAAAT TCGG CAT CCGG CCTGCCGCCGTGACG 39 125 ST40_RS18955 4168641 .. 4168669 - -12.5 -4.13591 CCAACACGAGAGAAA GCCGGCAATGG ATGCGCG CCATTGCCGAC AAGGTCGAGTGCGAG 89 253 ST40_RS18935 NONE ST40_RS18930 4164353 .. 4164382 - -10.7 -3.14132 GTCGGTTCCTATGAA GACCA-GTTGGCGG AAG CCGCCATCCTGGCC GCTTTCATTCCCGTC 65 482 ST40_RS18895 4155844 .. 4155864 - -16.9 -3.91196 CTGACAGACAGCAAA CAGGCCGGA AAA TCCGGCCTG ATACAATCTCGTGTG 100 106 ST40_RS18875 4151961 .. 4151989 - -16.8 -4.89063 GTATTGAAAAAGAAA GCGGCCTG-GACC GGAT GGTCGCAGGCCGC TGAATATCGGCAGTA 100 85 ST40_RS18870 NONE ST40_RS18865 4149851 .. 4149862 - -5.8 -2.75535 GCAATAGTGGAAGCA TGCC GAAA GGCA CCTCAACGGCACATC 50 39 ST40_RS18860 NONE ST40_RS18855 NONE ST40_RS18850 NONE ST40_RS18845 NONE ST40_RS18840 4145096 .. 4145115 - -12.8 -4.1196 AAGGCATCTGGAAAA GGCGGGCC GCTG AGCCCGCC TTTTTTGTTGCTATA 95 73 ST40_RS18825 NONE ST40_RS18820 4141512 .. 4141531 - -12.8 -5.0925 GCGGAAAAGCAAAAA GGCCGCCC GCAG GGGCAGCC TTTTGAGGAAGCATC 100 60 ST40_RS18815 4140740 .. 4140756 - -2.9 -3.54129 GACACGCGCCGCAAA GGCCG CATCACT CGACC TCGCACTCCGGCGGC 49 16 ST40_RS18810 NONE ST40_RS18805 4139677 .. 4139717 - -7.5 -2.78935 ACACTCCTCACCAGA TCTAGCGTTTGCGGCGGCA AAG CGCCACCGGAAAAGCGAAA CCGGTCCACAGACTT 55 94 mgtE 4138179 .. 4138210 - -9.4 -2.91695 CTGACCTTTAAACGA GGCCTGCCGAT-TGG AGG CTAGAACGGCAGGCC GAACCAAAGAGCCGC 62 11 ST40_RS18790 4136704 .. 4136732 - -7.6 -3.70919 CTGAAACTGGAAGAA GTCATCGACCTTC AGGC AAAGGTC-ATGAC GCTTCGGGACAATTT 67 377 ST40_RS18780 4135343 .. 4135381 - -11.8 -4.72486 CAGAAAGCCCAAAAA GA-GGTCCGGCTCGACC ACAAAA GGTCGAACCGGACAATC TGTGTCAGACGACAG 100 30 ST40_RS18775 4134908 .. 4134920 - -2.6 -3.01712 CGGCCCTTCTTAACA CCCA TCCGC CGGG AATTTCAGTTTACCC 42 129 ST40_RS18770 NONE ST40_RS18765 NONE ST40_RS18760 NONE ST40_RS18755 NONE ST40_RS18750 NONE ST40_RS18745 NONE ST40_RS18740 4130630 .. 4130640 - -2.4 -3.56568 CGATACGCAGAAATA GCCG GAT CGGT TCGCTAGAAGGATTG 47 44 ST40_RS18735 4129843 .. 4129857 - -7 -2.55 CAACACCTGAATTGA GCGGAC GAA GACCGC TTGGTGATCGCAACA 51 67 ST40_RS18730 NONE ST40_RS18725 4127985 .. 4128003 - -8.8 -4.73108 TCCACAAAAGCAAAA CGCCGC TCAACAG GCGGCG TTTCGGATTCTCATT 93 96 ST40_RS18720 NONE ST40_RS18715 NONE ST40_RS18710 4125858 .. 4125874 - -3.7 -3.57263 AGTTGCACTCGCAAA TCATCAG ACC CTGATTA GCGTGAAAAGAGTTA 51 72 ST40_RS18705 4125075 .. 4125092 - -14.1 -5.36441 TTCGGATAGAAAAAA CGCCGGC ATTT GCCGGCG TTTCTACGTTTGCAG 100 56 ST40_RS18685 NONE ST40_RS18680 4119907 .. 4119923 - -6.5 -3.05384 CGCTGCTGGATGCAA CGGAACG CAT CGTTCAG GTCGCCGGTGACCTG 54 376 ST40_RS18660 4116928 .. 4116940 - -6.2 -4.63107 ACGAAAGAAGGAAAA CCCG GGCCT CGGG CGCGGCTGGCCGGAA 76 102 ST40_RS18650 NONE ST40_RS18645 NONE ST40_RS18640 4113652 .. 4113673 - -10.1 -2.62396 CAGCGCCGGAGACCA CCGCTGCCG ACAA CAGCAGCGA CGACGACAGCGTTAC 60 335 ST40_RS18630 4111279 .. 4111298 - -15 -5.24989 GCATATACGAAAAAA CCCGGCTC GTCG GAGCCGGG TTTGAAACTTCAAGC 100 67 clpS NONE clpA 4108103 .. 4108124 - -15.9 -6.20267 TGAAAAACAAAAAAA GGCCCCGAA TCTC TTCGGGGCC TTTCCGATCTGATTG 100 50 ST40_RS18615 4107099 .. 4107110 - -4.4 -3.18264 CTGGGCAGTTAGTAA GGTA GCCT TACC TTTTTGGAGATTTTC 49 115 ST40_RS18610 4106315 .. 4106325 - -2.4 -2.82516 CCCTCCATCACGACA GCCC CCT GCGC ATGATCCTGGTTCCG 39 7 ST40_RS18605 NONE ST40_RS18600 NONE ST40_RS18595 4103299 .. 4103328 - -12.1 -3.59109 GCACACAGCAGACAA CGCCCCGCCTGGCT TCA AACCGGGCGGG-CG TTTTTCTCGATGCTC 81 43 ST40_RS18580 4100545 .. 4100556 - -4.4 -2.89564 GGTGCATTCGAGACA GAGA AGCC TCTC AACTACCAGGAAGTG 45 310 ST40_RS18550 4093072 .. 4093090 - -6.7 -3.74158 GGAAGCAGATGCAAA GGCCTTCG ACAG CGA-GGCC CAGAAACTGATCGAC 63 461 ST40_RS18530 4087172 .. 4087202 - -11.8 -2.71924 GATTGCTCTTCAAAG GGGCGGCATCCGCA AGA TGCGGATACCGGGC TTGTGCGGTTGGAGG 72 91 ST40_RS18525 4085140 .. 4085173 - -9.5 -3.08738 AACAACGGCATTCAA TGCAACCGGTCCG ACGAGAAA CGGTCCGGATGCA GCCGCGGTCAGCGAC 60 347 ST40_RS18505 NONE ST40_RS18500 NONE ST40_RS18495 4075206 .. 4075251 - -17 -4.24711 GAAAACCGGAAGAAA CGCGGCCG--AGAACCTGCAAC TGGT GCTGCCGGTTCTGGCGGCCGCG GAAGGTGTTGTCGAC 100 413 ST40_RS18475 4070803 .. 4070825 - -4 -3.97947 CGCATTGACCACAAA TTGACTGGGC TAT GCCCGATCTA CTGTTTCACGCTTAG 58 23 ST40_RS18455 NONE ST40_RS18450 4061005 .. 4061022 - -14.1 -5.95539 CCCGAAACAAAAAAA GCCCCGC AATT GCGGGGC TATTTCATTCCTGAT 100 59 ST40_RS18445 4059643 .. 4059657 - -7.8 -3.27158 CAGGCCAACAACAGA CCGGAA CGG CTCCGG CAATGCCGTGGCTTT 59 122 ST40_RS18415 4052851 .. 4052868 - -9.8 -4.35524 CTTTGAAATGGAAAA GGCGGC CAGTGT GCCGCC TTTTTTGTTGTCCGA 86 53 ST40_RS18405 4047969 .. 4047991 - -8.5 -3.13403 CCTCGTGCACCAATA TGGCGA-TGC TGAG GCAATCGCCA GTGCTAACCTGCCAT 60 63 ST40_RS18400 4045377 .. 4045393 - -2.1 -3.72695 AGGCGGGTCAGTAAA GACCGCC TGT GCCGACC GTAACGGCCTGCTGT 50 1 prfB 4044032 .. 4044049 - -14.1 -5.95539 GCGGAAACAAAAAAA CGGGGCC GAAT GGCCCCG CTTTCATTTGTATTT 100 53 ST40_RS18375 4037635 .. 4037651 - -15.1 -4.93318 CAGAACTGATAAAAA GCCGGGC ACC GCCCGGC TTTTTTGTTGGGCAA 100 108 ST40_RS18360 4035516 .. 4035531 - -10.4 -4.87626 TCTCAAGACGAAAAA GCCTCC CGAA GGAGGC CATTCGCTTGTGCTG 100 50 ST40_RS18355 4034258 .. 4034277 - -16.4 -3.62518 TCAAACATGCGGAAA GGCCGGGC ATTT GCCCGGCC TTTTTGTTTTCCGAG 100 147 ST40_RS18340 4031688 .. 4031707 - -2.8 -3.16399 TAAACTCAAAAGAAG CGA-ACCCC GAT GGCGTTTCG TGGGTCCAGGATATT 45 46 ST40_RS18335 4030536 .. 4030550 - -6.4 -4.4521 AGTATTTAAAAACAA CCATTC CGA GAACGG CCTACAACCGTCGAC 73 87 ST40_RS18330 NONE ST40_RS18325 4027134 .. 4027145 - -5.8 -4.98531 CCGTCAAAGGAAAAA GCAG TGCC CTGC CTCACCGTAAATCGG 84 27 ST40_RS18320 4026813 .. 4026827 - -4.2 -3.77666 CACACGGAACGCAAA TTTGCG CTG CGCAAC AACTCCGCACAGTCA 58 169 tig 4024891 .. 4024918 - -12 -5.0538 CCTGACTCGAAAAAA GCGACACCCCGT ATAT ATGGGATGTCGC CCTCAACGCAAAGTC 100 158 ST40_RS18310 4024091 .. 4024105 - -3.4 -4.43012 AGGCGAAGATGAAAA CCCGGC ATC ACCTGG GGATTTTCCGGCTTT 64 83 clpX 4022605 .. 4022625 - -15.5 -5.26119 CGCCCAAAAACAAAA TGCCGCTCA AGT TGAGCGGCA TTTATTCACGGTTTC 100 61 lon 4019846 .. 4019874 - -16.8 -4.21462 ACCGATTATTCAAAA GAAAAGCCCCGG TTTTC CCGGGGCTTTCC AATTTGTGCGCTGCA 100 50 ST40_RS18295 4019381 .. 4019406 - -16.9 -4.89009 ACAGGCAAGGAAAAA CCCCGCATCCG TTTC CGGATACGGGG TTGAGCGAAGAAATC 100 55 ST40_RS18290 4018552 .. 4018590 - -12.4 -3.03441 GACTATCCGGCAACA GTGCACGGCGC-CTGGC TTTCCG GCCAGCGCGCCGCACGC GACGTGATCGCAAGT 76 52 ST40_RS18280 4016976 .. 4017001 - -3.1 -4.58303 GCAAACAGCAGAAAA CACCCCGGTGC GCAG GCACCCTGGTT ACAAGTGACGGAATT 67 52 ST40_RS18275 4014975 .. 4014993 - -2.5 -2.59921 ATCAATGTGGATAAC TTCCTGTT TCGT AAC-GGAA TTATCCGCGTTGCAC 38 133 ST40_RS18270 4014723 .. 4014741 - -3.1 -3.8901 CCCGAAAGTACCAAA GCACTTC TATGG GAAGTGG CGCGAGTGACGGGGC 54 23 ST40_RS18265 4014347 .. 4014359 - -6.3 -3.73224 CCAGTTTGCAGGAAA GCAAA AAC TTTGC ACAACCCTTCAGGAA 60 273 ST40_RS18260 NONE ST40_RS18255 4013136 .. 4013158 - -12.7 -4.57569 CCACTCCCTCAAAAA TCCGCCGCC TCTTC GGCGGCAGA TCCTTATCTTTCGAT 100 29 ST40_RS18250 4012339 .. 4012359 - -4 -3.4529 AGATCAGCATTATAA GTATTTGC CAGAC GCTAATAC CCATTGCCCCGCCCC 49 41 ST40_RS18245 NONE ST40_RS18240 4010535 .. 4010575 - -2.4 -4.09685 TGCCAGGGTCGAAAA TTGGTTGTGTGCCGTCCGC ATCA GCGGTCGAC-CTCACCGAA CACGATGTCCAGAGA 56 5 ST40_RS18235 NONE nuoF NONE nuoG NONE nuoH NONE ST40_RS18215 4004497 .. 4004510 - -8.1 -2.70932 CTCTTTCCTCAACCA GCCAG CTGA CTGGC GGCCCAATAGCCGAT 57 5 nuoI NONE ST40_RS18205 4003262 .. 4003276 - -10 -4.08216 GGACTTTCTCGAAAA CGCAAC CAG GTTGCG TCAGATACCCTTGCC 83 26 nuoK NONE nuoL NONE ST40_RS18190 3999308 .. 3999321 - -2.4 -2.53759 AATAGGGTCAATTCA GACA TAGCTC TGTC TCGTCCTCGAAACCT 38 39 nuoN NONE ST40_RS18180 NONE ST40_RS18175 3995326 .. 3995341 - -2.4 -3.58343 CCGATCATTTGCAAA CCTCCG CTGT CAGCGG CCACTCAGGCCGCCG 47 47 mce NONE ST40_RS18165 3994512 .. 3994530 - -14.6 -3.92522 GCGGAACTTTACAAA GGCAGAGC TTG GCTCTGCC TTTTTTCTTTGCGGA 100 115 ST40_RS18160 3992634 .. 3992683 - -12.9 -3.59738 CAGCACAGCCCCAAA TTCAGCACAGCCCACCTACCGAAA TAT TTCCGGCAGGCCGGCTG-GCCGCA GCAGACGCCGCGACC 85 72 ST40_RS18155 NONE ST40_RS18150 3990276 .. 3990305 - -8.5 -3.52102 AGCCGACGGACAGAA GCACGTCGCCC CAGACGGC GAGCGTCGTGC AGAAGCAAACCATTG 65 293 dnaE 3986097 .. 3986112 - -4.6 -3.84633 CACTGGCAAAAAAAG CGGAGG TGCG CCTGCG GGATTGTCTCGATGT 57 471 ST40_RS18135 NONE ST40_RS18130 NONE ST40_RS18125 NONE ST40_RS18120 NONE atzF 3978050 .. 3978078 - -3.8 -2.88054 CCGGACAATGGAAAC CAATGTCGC-GCG CGCA CGCCGGGCCATTG CACAGTCCTTTCCGG 42 359 ST40_RS18105 3976293 .. 3976322 - -10 -2.56095 TCGATATCGAATTTA TGCCTGAGCCTC TCGGCG GAGGCCCACGCA AGCACATGATGCTGG 60 158 rpsB 3974833 .. 3974858 - -14.7 -2.77791 GCGAATTCAACAGTA TTCTGCCGCGG CAGA CCGCGGCAGGA GAGGCTTAAGCCTCG 83 31 tsf 3973772 .. 3973790 - -13.1 -6.06723 CTTTCTAAAAAAAAA GCGCCGG ACTTG CCGGCGC TTTTCCTTGAGCTTA 100 38 pyrH 3972940 .. 3972978 - -2.2 -3.06696 GCTTGGCTTAATAGA GTCTCGGCGCGCGCCAAC ATG GCATAAACGCACCGAAAC ACAAGAGCTTGAACC 42 61 frr 3972324 .. 3972354 - -8.3 -2.52464 TGCTCCCCCAACTCA CACTCCCCAGGTC GATCA GACCTGGGAAATT TCCTGCTCTTTTTTC 56 10 ST40_RS18075 NONE ST40_RS18070 NONE ST40_RS18065 3969443 .. 3969465 - -2.6 -4.8048 GTGGGAGACCAAAAA TTCAGGGTCT TCG ACACCCCGAT TACCGTGTTCTTATC 68 25 rseP 3968152 .. 3968167 - -11.8 -3.24245 TTACCGATAACGCAA CCGCCC TTCC GGGCGG AAAGCGATTTAGTCT 78 68 bamA 3965615 .. 3965639 - -18.6 -5.10461 GCCAGCCAACAAAAA CGGCCGCCGA ACGTG TCGGCGGCCG TTTTTTATCCTATGT 100 50 lpxD 3964504 .. 3964514 - -2.4 -3.31726 GTCTTCCATATAATA CCCC TTG GCGG ATTACCGCCGCAAAG 45 58 fabZ NONE lpxA NONE lpxI NONE lpxB 3960791 .. 3960815 - -5.8 -3.48276 TTTGTTGCGAGACAA CTGCGA-TGGAG TTC CTCCAGTCGC-G TGTGAGCAGTATGAT 55 346 ST40_RS17990 3950239 .. 3950257 - -6.6 -3.72695 ACCCGGCTTACGAAA CCAGGATC TTC GGTCCCGG CCGCGTTCGTGTTCA 63 79 ST40_RS17970 NONE fumC 3944503 .. 3944517 - -5.7 -3.05384 CGGCTTTCGACCGAA TGTCC GGAAT GGACA TTCGGCATAAGCTCC 49 136 flgB NONE flgC NONE ST40_RS17930 NONE flgG 3939128 .. 3939144 - -2.2 -3.05384 CTCCCTGTTAGCGAA TGCCGT TCGTG ACGGTA CCGGCCATCTCGTCG 42 1 flgA NONE flgI 3937421 .. 3937440 - -13.6 -5.40072 GCTGTCGCAAAAAAA CGCCGCTT CAAA AAGCGGCG TTTCAGAATTGCTCA 100 125 ST40_RS17910 NONE flgH NONE ST40_RS17900 NONE fliP 3934774 .. 3934807 - -16.1 -4.87665 TCTTATCGACAAAAA CAAAAAAGCGGAGCC TTTC GGCCCCGCCCTTTTG CGCCCCGACGCCCCC 100 46 ST40_RS17890 3933559 .. 3933578 - -16.4 -5.71712 CTGGACACAAAAAAA CCGCGCCC CGAA GGGCGCGG TCCTCTTGCCTGGAA 100 65 fliF NONE ST40_RS17880 NONE ST40_RS17875 3929605 .. 3929617 - -5.5 -3.39327 TGCCGACACCCAGAA GACGG CCG CCATC AAGCCAAGGAGCAGA 53 78 ST40_RS17870 NONE ST40_RS17865 NONE ST40_RS17860 3926589 .. 3926622 - -11.1 -4.9448 ATCTATCAAACAAAA CG-AAAGCACCGGGCA AGC TGTCCGGTGCTTTTCA GAGATCAGGCGCCGC 100 30 ST40_RS17855 NONE flgK NONE ST40_RS17845 NONE flaF NONE flbT 3921735 .. 3921751 - -6.5 -2.91144 TCACTCCTTAAACCA CGGCC AGCCTGG GGCCG TACTGAAAATTTTCT 53 1 flgD NONE fliQ 3920985 .. 3921008 - -4.6 -4.59944 AGGACGACAAATAAA TTCAGG-ACCA CGA CGGCGCCTGAA ACCATGCAAGAATAG 71 56 flhA NONE fliR NONE ST40_RS17810 3917303 .. 3917324 - -5.1 -3.14051 GCATCCTCAGGAATA GCCT-GCGCA GCT TGCGGGAGGC TTGCGTCTTCTTGCT 50 80 ST40_RS17805 NONE ST40_RS17800 NONE ST40_RS17795 3915820 .. 3915841 - -13.7 -6.17184 AGGATCAAAAAAAAA GCGCCCAGC CGAA ACTGGGCGC CAATTGCCTGGGAGG 100 81 ST40_RS17790 3915438 .. 3915456 - -9.6 -2.73243 ACCGATGGCTGAAAT CGGCATTC ACT AAATGCCG CGAAACAAGCACAAG 64 71 ST40_RS17745 3908446 .. 3908456 - -6.8 -4.2828 TTCCATGGATCAAAA GCCT CCG AGGC GGAAATTCTGGATGC 74 9 flgF NONE ST40_RS17735 NONE ST40_RS17730 3905547 .. 3905568 - -9.4 -5.07275 TGATATATACAAAAA TCGCCGCC AGACAA GGCGGCAA TTTCGTATTTATACT 100 59 ST40_RS17725 3904299 .. 3904313 - -5.8 -4.84017 AATTTTCCATAAAAA TCAATT GTA AATTGA AAGAGCCTTCTTTCC 83 209 ST40_RS17720 NONE ST40_RS17715 3900195 .. 3900214 - -9.4 -2.72441 AAATTGATAAACGGA CGGATAAA CTGT TTTATCCG AAGGCAACGCCTGGT 60 19 ST40_RS17710 3899096 .. 3899111 - -7.6 -4.25056 CAGCGTACGAATAAA CAATCG AATT CGATTG CGTGTCACTGACCCA 77 131 ST40_RS17705 3898393 .. 3898414 - -5.8 -3.36273 GGCGGTCAATACGAA GATGCCTG TTCCTC CCGGCATC TCATTCGATTGATCG 56 104 ST40_RS17700 3895876 .. 3895901 - -10.3 -3.36492 TTTCGAACTGTACAA TGGCGGGCGGG TTGC CCCGCCCGAAA ATCCCGTTGTGGCGT 73 40 ST40_RS17695 3894996 .. 3895018 - -14.8 -4.77173 CCCCGAGAAAACAAA TCCCGGCCGA GTG TCGGCCGGGT TCTTATTCTTAAATC 100 54 tpiA 3888333 .. 3888362 - -5 -3.05463 ACGGTTTCCATCGAA CGCCATTCTTCA TTGAAT TCAAGATTGGCG GCCTTCTACACCAGA 50 117 secG 3887880 .. 3887905 - -12.6 -5.10064 CTCAACACATAAAAA TGCCCTGCGA GTTAAG CCGCAGGGCA TATGTCGGGTGAATG 100 65 ST40_RS17655 3886193 .. 3886208 - -2.4 -2.87468 GTCGATCAGACCAGA CGGCCC TGAT GGATCG CTGCGCTTATGAAGG 40 0 ST40_RS17650 3885204 .. 3885219 - -3.2 -3.84514 ACGGCAATCACGAAA CACACC TAAT GGTTTG TGCGTCGGCAAATTT 54 133 ST40_RS17645 NONE ST40_RS17640 3880623 .. 3880650 - -13.4 -4.21922 TGACCTAAAAGCAAA GCCGGACAACCC ATCT GGATCGCCCGGC CAAACTAACCTTAAG 100 90 ST40_RS17630 3879551 .. 3879561 - -2.4 -3.86283 CGAAGGGATAGCAAA GGCG ACG CGTC AACACCAGTTCGGGA 52 200 ST40_RS17625 3878291 .. 3878321 - -2.5 -3.78419 TGACCAAAGACACAA GGTGCTCACCATT TGGAG AGCTGTGAACACC GGTCAGTTTGCCTTG 52 28 ST40_RS17620 3877427 .. 3877451 - -13.6 -3.64703 GTCGGTCGATGCAAA GCGCCAAGGC GAAGA ACCTTGGCGC TGCGTTTACCCGATG 89 31 glmU 3874485 .. 3874502 - -2.7 -4.58685 AAAGCCCTTCAAAAA TG-GATCC AAC GGACCGCA CTGCTTTAGACGACA 67 106 glmS NONE ST40_RS17600 3871808 .. 3871824 - -2.1 -3.58343 CGGACCACGTTCAAA CTTCTGG GAA CCGGATG CGTCGGCCTCGGGAT 49 396 ST40_RS17590 3870727 .. 3870743 - -3.5 -4.20806 GATCTGAAAACCAAA CGCGGCG AGG CTCTGCG CTGTCTTTTGTATCT 62 188 ST40_RS17580 NONE mfd 3864561 .. 3864577 - -5.1 -3.28712 CGGTCCTCCGGACAA CCACACT TTC AGTGCGA TTTTGGGCTGGCCCC 52 95 ST40_RS17565 3863276 .. 3863294 - -4.6 -4.11484 GTTAATGCGGCAAAA TCAACTGA AAT TCAGTTCA TGCTGTAACGGTGGC 62 18 pdhA NONE ST40_RS17555 NONE ST40_RS17550 3859250 .. 3859273 - -21 -4.19817 GTCATCGATTGAAAA CGGCGCGGCG TTGC CGCCGCGCCG GAGATGAGGCTTAAA 100 36 lpdA 3857725 .. 3857756 - -15.9 -5.20781 TACGACAAAAGAAAA TCGGCCTCGGCGC TGTTTT GCGCCGAGACCAA AAGGGATCAGGCGTT 100 32 ST40_RS17540 NONE ST40_RS17535 NONE ST40_RS17530 NONE lipA 3855556 .. 3855574 - -4.5 -4.72272 TGGTCGGATGAAAAA CTGGGCA TACGG TGTCCAG TGTCCTGTTGCTTTG 74 44 ST40_RS17520 3854903 .. 3854916 - -4.5 -4.15044 TGCTGCCGGAAGAAA CCTCG TGGT CGAAG AGAATGTCGGCTCCA 65 220 dusB NONE ST40_RS17485 3849230 .. 3849245 - -4.6 -3.24146 GTCTGCAACTAAAAT CGTGCC CGTC GGCATG GTTACTCGGTTCCTC 49 27 ntrC 3847751 .. 3847776 - -14.7 -5.45652 ACCTGGAACAAAAAA GCGGCCAGACC TTTC GGCCTGACCGC ATCAATTTGCCGCCC 100 54 ST40_RS17475 3845159 .. 3845169 - -5.4 -2.70003 CTACGACAAGAATAT CATG CGC CATG GGCAGTCACAGTCTG 46 14 ST40_RS17470 3843739 .. 3843751 - -4.1 -2.71712 CCCCGCGCCGCAAAT CACGA TTT TCATG GGAAGTTCCCTTTCC 43 75 trkA 3842289 .. 3842305 - -12.3 -2.80074 TCCTCCAGAACAGGA CGGTTCG AAA CGAACCG ATTGGTATTTTTGAA 72 94 ST40_RS17460 3841349 .. 3841365 - -5.1 -3.09834 TAGCCCACCAGTCAA GACCG TCTGCCT CGGTC TAAAATAGTTTCGTA 50 67 hfq 3840851 .. 3840879 - -3.7 -3.07291 AATCATCGCACGGAA GGGCTGGGGCAGA CGG TCTACCCCAGTAT CTTTCAACCTTAGAG 45 108 hflX 3839304 .. 3839315 - -5.8 -4.82901 CGTTCCGGACAAAAA TCGG ATCT CCGA CGAACTCGGCGACAC 81 271 ST40_RS17405 NONE arfB NONE ST40_RS17395 3826291 .. 3826301 - -5.4 -3.47227 GTTCAAGCACGACAA CAAG CTT CTTG CCGAGGAGTTCGTTC 55 467 ST40_RS17380 3823535 .. 3823555 - -5.3 -4.1891 GCTCCGCAACACAAA CTGACTGGC AAC GCCAACCGG ATCCGACACTAAAGC 65 201 ST40_RS17340 3816036 .. 3816047 - -4.4 -3.2614 TACGCGTGATACCAA TGCA TACG TGCA CGGGCGGCGGTATCA 49 65 ST40_RS17335 3814303 .. 3814316 - -3.8 -4.07568 CGGTCTTCCCGAAAA GCGA TTGGTT TCGC CTTTCACCGGCAACG 60 378 ST40_RS17330 NONE ST40_RS17325 NONE ST40_RS17320 3810383 .. 3810422 - -11.4 -3.07222 AGGACGACCGGAACA TCACCGCAGGCTTTGTCC TGGA GGAGCCAGCCTGCGGTAA GAAGTGCTTTATGCG 72 34 ST40_RS17315 NONE ST40_RS17310 3808131 .. 3808152 - -2.9 -3.30159 GCAATCGGTTCATAA GGCGCGGCAG GTC CTGC-ACGAC CTCTGGCGCGGCCTC 45 89 ST40_RS17305 NONE ST40_RS17300 3806660 .. 3806691 - -10.9 -3.01712 CCTCCGGTTTGAATA TCTGCAAGAGCCA GGCAAG CGGCTCTTGCAGT CGGGATTTATTCCGC 69 32 ST40_RS17295 3806355 .. 3806371 - -2.3 -3.5013 GTCGAAACCAATCAA CAGAA ATAGGTA TTCTG AGCAGAATATGGGCA 47 106 ST40_RS17290 NONE ST40_RS17285 NONE ST40_RS17280 NONE ST40_RS17275 NONE ST40_RS17270 NONE ST40_RS17265 3801159 .. 3801212 - -4.4 -4.15565 CGGATCATTCCAAAA GCACTCTTGCGGGGCTCTGATACC TCGGTT GGTATCAAGGCCCCGCTTTAACGA GAGAGACCCTCAGGA 62 35 ST40_RS17255 3796851 .. 3796867 - -4.3 -4.74706 TCGAAGAGCGAAAAA GCGGGCT TCC AACCGGC CTGGAAACCTGGATC 78 258 ST40_RS17190 3780104 .. 3780116 - -6.9 -4.26881 GGCTAGAAAATCAAA CCAGG CAT CCCGG TCGCAACAAGAGGAC 74 489 ST40_RS17175 3777928 .. 3777939 - -3.6 -2.90075 TGCGCTGCAACCATA CCCC GAAA GGAG AACAGGCTTAATCGT 44 33 ST40_RS17170 3776829 .. 3776839 - -4.6 -3.71649 TTGCGAAAGTCTAAA GGCC ATA GACC TCCGCGAGTTCCGCG 55 10 hspQ 3776324 .. 3776348 - -15.8 -3.93401 GCCAGAAATGAAGAA GGCCGGAACT GTGAA AGTTCCGGCC TTTTTTGTATTTGAA 100 75 ST40_RS17155 NONE ST40_RS17150 3771844 .. 3771856 - -4.7 -3.19602 TCCCGCATACCAATA CGGGC CGC GCCAG GAAAGCGAGGTTTCA 49 62 ST40_RS17145 3770677 .. 3770702 - -2.5 -3.94954 GCAATAGACAAAAGA CGCATACAGAC CAGT GTCTGTTCACA GAACAGTGTGTGTGA 54 21 ST40_RS17140 3769855 .. 3769874 - -15 -3.11757 GTCAAAATCAGAAAG GCCCCGCA TTCG TGCGGGGC TTTTTTGTTTCGGCA 91 54 galU 3766188 .. 3766225 - -22.1 -2.84602 GGGATTGGAGCAAAC GGAAAGGGCCGGGTCTT GCGC AAGACCCGGCCCACTCC TAAAGGCTTCTGGCG 100 76 ST40_RS17120 3764661 .. 3764679 - -7.4 -3.87075 ACCATCTTCCAGAAA CGAGCATG AGC CATGTTCG GTGTCTCCTTTCCTG 68 205 ST40_RS17115 3764083 .. 3764116 - -3.9 -3.63515 GCTCACCTGGAACAA CATCGCCTACTATCAG TAC CTGAT-GCAGGGCATG CGCGACGCGATCGAA 51 149 ST40_RS17085 3759515 .. 3759556 - -13.9 -4.16943 GGCTAGACCTGAAAA CGACAA-CAGCGGC-CAGG GTGGAA CCTGAGCCGCTGTTTGCCG TTACGGGGAGGGAGG 100 54 ST40_RS17075 3755787 .. 3755799 - -4.1 -3.4811 TTCGCCACAAGAATA CAAGT TGA ACCTG GACCGTTAAGCGTTG 51 47 ST40_RS17060 3753743 .. 3753755 - -4.1 -2.74192 GATTGTGCAAGAGGA GGTAA GTG TCACC TGTTAAACGGCATCA 43 48 ST40_RS17055 3753140 .. 3753158 - -5.9 -4.00476 CAAATTCATGAGAAA CTGCTGC TCCTG GCAGCGG CTGAAAAACTTCCGC 65 222 ST40_RS17040 3748429 .. 3748447 - -5.9 -4.25104 CCTGCGTGAGGAAAA CCAGGCC CAGGC GGACTGG TTCCTGGAGCAAAAT 68 219 ST40_RS17015 3742595 .. 3742609 - -7.8 -3.31263 ATTCGATGCGGAGAA CGCCAG GAT CTGGCA GGATCTCGGCTTCGA 59 207 ST40_RS16985 3736294 .. 3736349 - -15.5 -3.81146 TGGTTGAACGAATAA GACCGCCCCCGGAAGCGATTG-TGGT GGGAT ACAATCAGTTGCTTCCGGGAGCGGCC CGGGCTTTCAAAGAA 100 144 eutB NONE ST40_RS16960 3730998 .. 3731012 - -7.8 -3.72576 TGCCGGTTCAGGAAA CGAGCA TCG TGCCCG CATTTGCCTTCTTGA 65 3 ST40_RS16955 NONE ST40_RS16950 NONE ST40_RS16945 3727423 .. 3727445 - -14.1 -4.87807 CGAAGATACCAAAAA GCCCGCCGG TTGCT CCGACGGGC TTTGTTATTTGGTGG 100 50 ST40_RS29695 3713018 .. 3713051 - -16.7 -4.03234 TCGCTGGCAGATAAA TGAAATGCCCCGCCG TTTC CGGCGGGGCTTTTCG TCAGTTACCGCTGTC 100 53 paaG NONE paaI NONE paaF 3708689 .. 3708733 - -18.2 -3.01984 TAAGTCAACCACATA TCCAAATGAAAAAGGCCACCT GATC AGGTGGCCTTTTTC-TTTGGC GAAAGGTCTGGAAAG 100 101 ST40_RS16865 3699952 .. 3699988 - -17.4 -3.87104 GGGATAGCAGAACAA CAAAAGCCGCCGAAGG GGTGA CCTCCGGCGGCTTTTT GTTTGCCCTCGCGAA 100 50 ST40_RS16855 3696569 .. 3696587 - -5.2 -4.08216 TGAGCGTCGTGAAAA GACGGAGT GGC ACCGCGTC GTGATTTTCAACGAC 61 474 uvrA 3692847 .. 3692871 - -18.7 -4.87037 AATACATATGAAAAA GGCATGTGTGC GGT GCACACATGCC TGTCGTCACGTAACT 100 57 ST40_RS16840 3692375 .. 3692413 - -11 -4.86001 AGGACGCCAGAAAAA CGAACGCCCGCCAGC GGGAGGAGGT GCTGGCGGGCGA-CG TTTCGACGTGACAGG 100 121 ST40_RS16835 3691416 .. 3691447 - -12.3 -6.14618 GACAAAACAAAAAAA CGCCCGCCGGT GGGAGGAGGT ACCGGCAGGCG CTTTTGGAGTTCCAC 100 106 trmFO 3689720 .. 3689745 - -8.3 -5.07275 CCAGACACACAAAAA GGCGCTTTCCC GCGA GAAAAAGCACC TGTTTGCAAATTATC 95 96 ST40_RS16800 3684292 .. 3684311 - -12.1 -2.71681 GAATCTTGTCAATCA GCCCGGC CCTTGC GCCGGGC TTTGTCATTTCAGGA 72 35 ST40_RS16740 3672875 .. 3672900 - -8.3 -2.58822 CCGCCTACAGAAGAG CAGGGGCGGCAA CAC TTGCC-CCCGTG TACTACGGCACAGTG 52 200 ST40_RS16730 3670980 .. 3670999 - -7 -3.53761 TAAGCTTGTGCGAAA GCCTCCAG GCAG CCGGTGGC GACTGCTTCGTTCGC 58 109 erpA 3664801 .. 3664818 - -4.8 -3.55622 CTCAATTGTTCGAAA CTGCCGG GGCAA CCGGC-G TCAAAGCGGTATCGC 52 48 xth 3663791 .. 3663802 - -3.6 -4.62069 CGGTGACCGTAAAAA CCGA ACGC CCGG CAATCGAAGTCGTTA 69 214 parE 3659770 .. 3659803 - -6.5 -3.35597 CCGACCGGTCAAATA GGCAGTGCGGGCAAA AATA TACGCCCGCCCAACC TCTTCAAAAAAAGAT 58 67 ST40_RS16690 3658837 .. 3658851 - -2.1 -3.13773 CTTGAGAGGTAAAAT CTCAA GAAAA TCGAG TAATTCCGAGTACGA 42 191 ST40_RS16685 NONE ST40_RS16680 3656002 .. 3656027 - -6.2 -4.27316 GGGCTGAATGCAAAA GACTGAGACAG TTTTT CTG-CTCAGCC CCTGTTTTTCCGATG 71 82 ST40_RS16635 3647262 .. 3647279 - -14.1 -4.61873 TCGGACAAATGAAAA GCCCGCC GGGT GGCGGGC TTCGGTGTTGTGTCA 100 38 ST40_RS16630 3646708 .. 3646720 - -2.6 -3.42283 CAAGGCAGGCAAATA CCGG TCTGT CCAG TCTGCTAATTGTTAC 45 60 ST40_RS16625 3645824 .. 3645834 - -6.8 -3.53012 GTGCCGCGTCCGAAA CCCT TCC AGGG GTAGGCAGAAGTCGG 60 57 ST40_RS16610 3641594 .. 3641606 - -10.5 -2.75863 TCAAAAGGAAATTCA GCGCG TGA CGCGC CGGCGCTAGGCCGGA 66 55 ST40_RS16590 3637933 .. 3637943 - -3.2 -3.6608 ATGACGCTAGGGAAA GATG TAG CACC GGCTTCGTTCAAGAC 51 80 ST40_RS16585 NONE ST40_RS16580 3636149 .. 3636165 - -7.9 -2.87344 GAGTTTTTTCACACA GGCGCCC ACG GAACGCC GCCAAGACAACCCGG 56 77 cobD NONE cbiB 3633620 .. 3633641 - -3.7 -4.25104 CGGTGCCGATGAAAA CGCCTGACCT AGA AGGCCA-GCA ATAGCGCCAGACCTG 64 12 ST40_RS16530 3624768 .. 3624784 - -5.1 -3.72324 GAGCTTTATCAAGAA GCGCTAT TCA ACAACGC AGAGCCTATGGAGGC 58 256 ST40_RS16525 3623317 .. 3623329 - -4.7 -3.75153 CGCGCTCAAGTCAAA GACCG GCC CGGGC AGGATCTTTATCGTT 57 437 ST40_RS16505 3619519 .. 3619548 - -4.9 -4.40963 ACCTGTCAAAAACAA CGGCAACATCGCG CAAG CTCAATAGTGCCG TGAGAAGGCTCAGCC 68 106 ST40_RS16500 NONE ST40_RS16495 NONE ST40_RS16490 NONE ST40_RS16485 NONE ST40_RS16480 NONE ST40_RS16475 3613518 .. 3613559 - -5.7 -3.01712 TTCCTTTTTTGAAGA GGTGACCGGGCCCCC GAAAGTGGGAGA GGGGGCCCGGACAGT GCTCAAGGTGTTACT 52 36 ugpC 3612320 .. 3612340 - -15.4 -3.66178 TCCCGTAATTTCAAA CGGCCGCC TTTCG GGCGGCCG TTTTCATTTGGGGCA 95 55 ST40_RS16450 NONE ST40_RS16445 NONE ST40_RS16440 NONE ST40_RS16435 NONE ST40_RS16430 3603186 .. 3603212 - -13 -4.86621 AGCTCCAATTAAAAA GCTCCACCGG CAGAGGT CCGGCGGAGC TTTATGGGATCGGCA 100 471 ST40_RS16425 3602138 .. 3602152 - -7.8 -4.09739 GCAATTGCGCCAAAA CAAGCC TCA GGCCTG GATCGTGTCGACAAT 74 17 ST40_RS16420 NONE ST40_RS16415 3599702 .. 3599721 - -2.1 -2.73338 AGAACCTCTTGAAAC GTCAGTT GTTTGA AACTGGC AAGACAGAACCTGTC 39 7 ST40_RS16410 3598406 .. 3598422 - -15.1 -5.29445 TTGGAACAAGAAAAA GGCCGGG TGA CCCGGCC TTTGAAGTGTGTCTT 100 57 ST40_RS16395 NONE cls NONE ST40_RS16385 3592728 .. 3592739 - -5.8 -3.53091 ACTTCCGGGTTCAAA TCCG AAAT CGGA ATGATGTCTTCTGCT 55 463 ST40_RS16375 3591494 .. 3591521 - -17 -4.91852 GTCATGAAAAACAAA CGCCCGCAATCC GGCC GGACCGCGGGCG ATAACAATGATGTGG 100 48 ST40_RS16370 NONE ST40_RS16365 NONE sseA 3588931 .. 3588954 - -8.1 -4.29845 CAAGCGAAGTGAAAA CCCTCGCAG AACAGA CCGCGAAGG CAACCGAGGAAATCA 77 402 ST40_RS16345 3585817 .. 3585831 - -4.2 -3.70902 CCTTCTATATCGAAA CGCC AACGTGG GGCG ATTTGAAACCGGGTC 57 382 metC 3579287 .. 3579318 - -13 -4.41494 GATCTTCAAGGAAAA GCGGAACGACCCTA CGAT TTGAGCCGTTCCGC CCTTCGCTCGACAGT 100 44 ST40_RS16290 NONE ST40_RS16285 3573384 .. 3573408 - -4.2 -4.17762 CACGGCGCAAAAGAA GC-GCTGAGGT CTCT ACCCCGGCAGC TGGCGTATGCCAGAG 65 497 ST40_RS16275 3571724 .. 3571752 - -16.8 -3.03487 AATCGGAAAGAACGA CGGCCTTCCTGC GCGAA GCAAGAAGGCCG GAGACGTATCGTGAC 100 53 ST40_RS16270 3571349 .. 3571366 - -3.5 -4.1021 TTCCAGAACGAGAAA GTCCGAAA CGA TTTCG-AC AAGGGGGCAGCTCTG 59 71 ST40_RS16260 3568931 .. 3568962 - -11.6 -5.75538 TGCAAAAAACAAAAA CCGCCG-GCCCCT GCAATAT AGGAGCACGGCGG TGTTTCTAGACCGCG 100 54 ST40_RS16245 NONE ST40_RS16240 3566666 .. 3566697 - -11.6 -2.87132 TCGCTTCGGGACAGA GCACGCGCATGA CGCCTATT TCATGCGCGGGC GTATCGTCTATCACG 66 317 ST40_RS16225 3564999 .. 3565011 - -6.2 -4.41348 CGTGTTCGAAATAAA CGCC GGTCT GGCG GAAAAACTCGATATC 71 122 ST40_RS16205 NONE ST40_RS16200 3562221 .. 3562235 - -5.7 -3.73336 ACCGTAAGGGAAGAA GTTGG CACGC CCAAC GGGACTCGAACCCGT 60 13 ST40_RS16190 3559214 .. 3559238 - -15.7 -4.82901 CTGTGGCTACAAAAA CGGCCCGGTTT TCA AGACCGGGCCG TTCTGGTTTGACATG 100 59 ST40_RS16180 NONE ST40_RS16175 3557586 .. 3557596 - -3.2 -3.62096 CTCGACCATGCGAAA GACG CTC CATC AGACGTTCAAGGGTA 51 44 ST40_RS16170 3556426 .. 3556436 - -3.2 -3.40597 GTTTCGAGGCAAAGA TCGA AGT CCGA CTGGTGACGCGCAGG 47 497 ST40_RS16110 3539243 .. 3539270 - -9.8 -2.78816 TTATTGTTCAGGAGA CCCGGACCGG GAAAAGCT CCGGTCCGGC ATGTCTGACGTGTGA 64 45 ST40_RS16105 3537855 .. 3537871 - -6.5 -4.24123 GTAAGAAGCTGAAAA CCCTAGG TAA CATAGGG GTTGTAATGGCAGTT 74 44 tssB NONE tssC 3535474 .. 3535503 - -12.1 -4.07568 CTCCGCCCGGGAAAA CCGGGCTGCATCC CGTG GGATGCATGCCGG GGGGCAGGCTGCCGC 91 61 ST40_RS16090 3534808 .. 3534833 - -21.9 -4.15396 GTCCAAACCAAAGAA GGCTGCCGCGC CGAA GCGCGGCAGCC CTGCAGGCCGAAGCC 100 41 tssE NONE tssF NONE tssG NONE tssH 3527706 .. 3527735 - -19.4 -3.75153 CGGGCGGAATCGAAA CGCCGGACAGGT GGGAGT ACCTGTCCGGCG TTTTTGTTGGTTGAT 100 42 ST40_RS16030 3516514 .. 3516542 - -10.2 -3.19285 GATTGGAAACACACA GGGCGCGGGGCGG TCTG CCGCCTCA-GCCC AATTCGAACGTTGTG 71 19 ST40_RS15990 3507912 .. 3507925 - -6.7 -2.76399 GGTAAGGAAAGCAAC GGCAA TCGC TTGCC TCATGATGCTTTGTA 52 79 ST40_RS15985 3505665 .. 3505685 - -3.9 -2.71712 GGTTGTCCTGGAAAC GTTTGACCC GCC GGCGCAAAC CGGCAGGCCTGGAGA 43 51 ST40_RS15980 NONE ST40_RS15975 3503770 .. 3503788 - -4.4 -3.14132 CTGTTTGGTCATGAA TGGCGCGG GTG CAGCGTCA TTGGCAGGTTTTCAC 47 0 ST40_RS15970 3502484 .. 3502494 - -2.4 -4.4078 TCTGGTCAAGGAAAA GGGC TGG GCCG GTGATGTTCTGATTG 63 224 ST40_RS15955 NONE ST40_RS15950 3498626 .. 3498647 - -2.8 -3.09516 TTTTTCAGTACGGAA TGGCTGGC TCATCT GCCGGCCT CCTTGGCAATCGCTT 43 12 ST40_RS15945 NONE ST40_RS15940 3494992 .. 3495028 - -22.4 -4.52589 TGTTCGGACATAAAA GCGAGCCTCGCGCAAC GATGT GTTCCGCGAGGCTCGC AAAGTTTCGTTAAAA 100 64 ST40_RS15935 3493629 .. 3493645 - -2.1 -2.56596 TTTGCGACCAATTTA GGCAGCC TTG GTCTGCT CCATGCGCTCCGTCG 38 6 ST40_RS15930 NONE phaC 3477526 .. 3477550 - -8.5 -3.71649 CGTGGAAACCGCAAA GCAGCAGGC CTTTCTT GCCAGCTGC CGTTGTGAAGTCGTC 67 209 ST40_RS15855 3474091 .. 3474102 - -2.2 -4.41348 GTGTCGCCAAACAAA CCGT CCGC ACGA TGCTTGGTGGCGACA 63 327 ST40_RS15840 NONE ST40_RS15835 3471173 .. 3471187 - -7.1 -3.70139 CAATCCGAAGAAAGA CGGGA AATAA TCCCG AGGACAAAATATGTG 62 58 guaD 3469709 .. 3469734 - -13.3 -4.11484 CTGAAGCGGCCAAAA GCCGGGGCA TTTAGGCG TGCCCCGGC CAAGGTGTCAGGACT 100 33 ST40_RS15820 3467882 .. 3467898 - -5.7 -3.45023 GCAGCATCATGAGAA GCCGCGA GAA CCGGGGC TCTTTCAGCGTCAGG 55 84 ST40_RS15800 3463845 .. 3463863 - -6.7 -3.78034 GAGGGACAGGAAGAA CTCGTGGC TCAT GCCACG-G CGACCTATTCCGTTC 63 78 ST40_RS15790 3462269 .. 3462291 - -9.1 -3.28714 ACAGCCAGCAGAATA GGGCCTCCG ACCTG CGAAAGCCC GCTTCGTGCGGGAAG 65 44 ST40_RS15775 3457736 .. 3457757 - -14.4 -4.85782 CTCTTGAAAAACAAA CGCCCCGC ACGAGG GCGGGGCG TTTTTTGGTGTTCGG 100 48 ST40_RS15770 3449813 .. 3449823 - -5.4 -2.55351 GCCGCTTACAGGAAG GAAC CAA GTTC GCGGCTCTTGTTCTC 46 5 ST40_RS15765 3448165 .. 3448186 - -2.1 -4.07687 ATGCCGGCTTCAAAA GCAGCCGCA TTGA TGCGACGGG CCATCGACCGTCGCA 57 257 ST40_RS15735 NONE folD 3439124 .. 3439150 - -6.5 -4.88795 AGGCAACAAAAGAAA CACCGCCAGCC AACCA GGCTGCCAATG AGGAAAATGCGTTGA 85 330 ST40_RS15725 NONE ST40_RS15720 3432778 .. 3432794 - -4.3 -2.94416 CACTCGCACGAGACA CGAGTGC ACC GCAACCG TTGGCGGGCAATTTG 46 111 ST40_RS15715 3432255 .. 3432278 - -8.8 -4.10657 TCACACGTTTGAAAA CGGCCACC TTTTTATT GGCGGCCG TTACAAGAAGATTGG 80 58 ST40_RS15710 3430422 .. 3430435 - -3.8 -3.05384 TGGGCCGGGACGCAA GGCA ATTACA TGCC GAGGCCGCCGATGCA 45 17 ST40_RS15695 3425775 .. 3425793 - -4.5 -3.95324 CAGCGGGAAGAACAA GCCTGAA GTGCG TTCTGGC CCCAAACGGGCCCCT 60 41 ST40_RS15680 3422972 .. 3422996 - -18.6 -4.56597 GCGGCTCCTGAAAAA CGGAGGCCGG TCTGT CCGGCCTCCG AGGGTGTTCACTTAG 100 37 ST40_RS15675 NONE ST40_RS15670 3421719 .. 3421744 - -11.2 -4.64766 CTCATACGGCAAAAA GGCTGCGG-AC GCCAA GTGCCGCAGCC TGATCAAATGGTCGG 95 71 ST40_RS15665 3419952 .. 3419976 - -13.6 -5.4251 TCGACAGACAAAAAA GAACCCGCGGC AACA GCCGCGGGT-C TGGTGTTTTCAGCTG 100 50 ST40_RS15660 3418941 .. 3418957 - -15.1 -5.68438 GCATCAAATAAAAAA GCCGGGC AGG GCCCGGC TTTATTTCTTGATAA 100 54 ST40_RS15650 3417007 .. 3417022 - -3.2 -4.59773 CGCGATCCGGAAAAA TCGGGA TCGT TCCGGA TTAGGCTTACCGACA 70 472 moaA NONE ST40_RS15615 NONE ST40_RS15610 NONE ST40_RS15605 3408048 .. 3408058 - -2.4 -4.36914 CTCTGCGGCAGAAAA CCCG GAG CGGC TCAGATCATCAACAT 60 26 ST40_RS15600 3406676 .. 3406688 - -9.1 -2.71268 TTGCAGCACATATGA GCCTG ACA CAGGC AAACGACTCCATTTG 60 89 fdhD NONE mobA NONE mobB NONE ST40_RS15580 3403276 .. 3403301 - -4.5 -3.53012 GGGCCGTGTTGCAAA GGACGGCGAGG GTTA CCGCTTCGTCC CGGCCAACTGGCCCT 52 88 ST40_RS15570 3400741 .. 3400751 - -8.2 -3.85698 TGCTTTCCGGACAAA GGCC TGT GGCC AAAGGACAAGGCCAA 69 445 ST40_RS15560 3399744 .. 3399759 - -3.9 -4.40552 CCTACGAAAAAAACA CAGCG TGATTT CGCCG AATTTTCAATTTTTC 66 158 ST40_RS15555 3398840 .. 3398850 - -3.2 -3.18681 CCGGAATGCGATCAA CTGG AGG CCAA TCAGCCGCCGTAAAC 45 26 ST40_RS15550 NONE ST40_RS15545 3397131 .. 3397158 - -16.4 -5.10767 CAGGTAACAGAAAAA CGGGCCGGAACTT GGA AAGT-CCGGCCCG ATTAATTCGAACGCT 100 51 ST40_RS15540 3395388 .. 3395406 - -3.1 -3.17763 TGGACAGGGCATGAA TCGGAAC TGTTC ATCCCGA CGAATTTTGCGGTGA 45 439 ST40_RS15530 NONE ST40_RS15525 NONE ST40_RS15520 3392927 .. 3392955 - -5.2 -3.16564 GCGGCAGGTCAGTAA GCGGCAGTCGAT AATAG ATCGACAGCAAC ATTTAACTAGATGTC 52 32 ST40_RS15495 3386983 .. 3386993 - -2.4 -3.25719 GCAGGATAGGATCAA CTCG GGT CGTG GTCACCCATTATCAT 43 37 ST40_RS15490 NONE ST40_RS15485 3385545 .. 3385574 - -10.8 -3.23452 ACCGGGACAAGTGAA CTGGCCGGCAACA CGATC CGTT-CCGGCCAG CGAACCCCTGAGGTT 71 61 ST40_RS15470 3382538 .. 3382570 - -9.8 -3.20723 CTTTCAGGAATTGAA GCGGCCTGAAACCGC TGAT GCGGAT-CAGGCCGA TCTTGCCTTGCCGGA 68 17 cobS 3380414 .. 3380442 - -11.8 -2.54617 GATGGCAAAAACGAT CAACAGGGTTGC TGCGC GCAAACCTGTTG CCTCTCGTCTAACTG 71 97 ST40_RS15455 NONE ST40_RS15450 NONE ST40_RS15445 3378238 .. 3378268 - -3.9 -4.09739 GGAAGTGGTCGAAAA GGCGCTTGCAG CGGTCAGTC CTGCAGGAGCC GAACTGGCGGCAGCC 60 72 ST40_RS15400 NONE ST40_RS15395 3354765 .. 3354777 - -4.7 -2.89797 GCGCGACAAACATCA GGCGG CTT CCGAC TTCTCTTCCGCGATG 46 10 ST40_RS15390 3354547 .. 3354566 - -8.6 -4.20368 GCAGCTGAAGAGAAA CCGGG-AAC GGT GTTACCCGG TTTGCTTTTTTCGGT 77 45 ST40_RS15375 3351936 .. 3351974 - -6.5 -2.92192 GCGCATGTAAGCAGA GTTGATCCCGCCGGTGGC ATGG GTCACCGGCGGGG-CTTC AGGTTTCCAGCTGCC 53 24 ST40_RS15355 3347787 .. 3347806 - -15 -4.67038 GTTGGAAAATGAAAA GCCCCGGA TTGC TCCGGGGC TTTTTGCTGGACCAG 100 52 ST40_RS15310 3336564 .. 3336574 - -6.8 -4.27211 CTGAAAGAAATGAAA TGGG CGC CCCA AGGCGTTGAAAAGGT 71 255 ST40_RS15280 3331838 .. 3331853 - -11.8 -2.71712 CTGGGGCTCGGAAAT CCCGGC TGGA GCCGGG CGCCTTTCAGTGAAG 65 473 ST40_RS15270 NONE ST40_RS15265 3329532 .. 3329556 - -17.9 -3.64487 CCATACCCCTAAGAA CCGATCCCGCA ACT CGCGGGATCGG TTTTTCGTCTTTGGC 100 55 ST40_RS15255 3327614 .. 3327628 - -5.7 -2.78384 CGGGTTTCCATCACA GTGAC GGTAA GTCAC AAGGCCGGGGTGGCT 50 84 ST40_RS15250 3326401 .. 3326415 - -6.4 -3.30443 CGAGGAGGAGATCAA GGAACG CGG CATTCC CTACGAGTGCGGCGT 56 382 ST40_RS15240 3323854 .. 3323888 - -17.9 -4.06419 CGGCCTTATAAAGAA CCAAGGCCGCCAGCGG TGTC CCGC-GGCGGCCTTTG GTTTGATACTCGATC 100 176 ST40_RS15235 3321547 .. 3321566 - -12.8 -4.00407 ATGGAAAAAGTGAAA CGGCGCCA TCAA CGGCGCCG TTCGTGATTTCAACG 93 77 ST40_RS15230 3320934 .. 3320954 - -16.1 -5.95539 GTTGAAAGAAAAAAA GCCGCGCCG GTT CGGCGCGAC TGTTTTTCGACGGCT 100 44 ST40_RS15225 3320109 .. 3320122 - -6.7 -3.53224 CATGTCTCCCTGAAA CCTGT TTTG ACAGG ATTTGGTATTTATAC 60 214 ST40_RS15220 3318968 .. 3318987 - -7.8 -4.28375 GGAAGACACGGAAAA GCTCTGCC TGTT GGCACAGC GCGGATGCCACGAAG 75 196 ST40_RS15195 3310684 .. 3310712 - -16.8 -2.90075 GCGGTCTGAAGGATA GCCGGTGCAGGGT TTCG ACCC-GCACCGGC TTTCTTTTTATGCGT 93 33 ST40_RS15175 3305856 .. 3305867 - -7.2 -2.85503 GCGCAACATCCAAAT GCCG AGAC CGGC CGGAAACGTGTTGCG 55 184 ST40_RS15170 3305186 .. 3305209 - -5.2 -3.4331 AGTGTCATGAAAAAT CCTGTCGTTG GGCG CAAAGGCAGG CCGGAGCCTTTAAAA 53 138 ST40_RS15165 3303895 .. 3303920 - -14.7 -4.60292 CACAACAATAATAAA GCCCGGAGCTT CGCA AGGCTCCGGGC TTCTTTTGCGCATTT 100 93 ST40_RS15150 3299125 .. 3299150 - -3.1 -3.54307 AACACGTTGCTGAAA CCATCAGGCTG CATC CAGCCGGGCGA GGAAGTCGTCCAGAG 49 3 ST40_RS15135 NONE ruvX 3293941 .. 3293951 - -2.4 -3.02371 GCCTTGAAACAAGGA CCCG TAC CCGG CAGCGGTGGGATCAG 42 37 ST40_RS15125 3292745 .. 3292755 - -5.4 -3.11459 AAGATCACGACTGAA TCTC GGC GAGA ATACTGTCGCAATAG 50 245 ST40_RS15120 NONE ST40_RS15115 NONE ST40_RS15110 3289305 .. 3289323 - -3 -3.75817 CGTGCATAATAAATA GCCATCGC AAT GTAACGGC ATGGCAGCCCGGATC 51 91 plsY 3288602 .. 3288616 - -8.5 -3.32343 GTTATATTTTCAGAA GCGCG GTTCA CGCGC TTTCATCGCCGGGCG 64 18 dprA 3287396 .. 3287408 - -5.5 -2.71712 CGCCGCCTGTCAAAT GGACC TTT GATCC TTCCGGGTCAAGCGG 47 90 topA NONE rnr NONE ST40_RS15085 NONE ST40_RS15080 NONE ST40_RS15075 3280588 .. 3280603 - -2.5 -3.0127 CTATCCAACTAGAGA CATGG TTCCGT CCACG GTTCGTATTCATGAC 42 3 rpmG 3280130 .. 3280147 - -14.1 -5.1675 CCACGCATGAAAAAA CCCGCCG TTTC CGGCGGG TTCTTTAAAAATCAT 100 54 ST40_RS15060 NONE ST40_RS15055 NONE ST40_RS15050 3276428 .. 3276439 - -3.6 -3.53811 GTGATCGGTGCCAAA GCCG TCAA CGAC GCAAAAACCGATGCT 49 316 ST40_RS15040 3275010 .. 3275031 - -10.1 -4.45544 CGTCAGGAAGGAAAA TGCCTCACC GGCC GGTGAGGCT TCGGGAAGAGTGTGG 88 66 ST40_RS15035 3274211 .. 3274227 - -5.8 -2.74144 TGGTTATTTCTAAAG GGAACG GGCTG CGCTCC TGTCCGGATCAAAGC 50 3 ST40_RS15030 3272332 .. 3272344 - -7.7 -2.71712 CTTTCGCCGCGAAAG GACAC TTG GTGTC TTTCGGCTCGTGAAC 53 469 ST40_RS15010 NONE ST40_RS15005 3269751 .. 3269775 - -15.7 -5.34655 CAACGAAAAAGAAAA CCCGCCCGC GAGGCCT GCGGGCGGG ATGTCCAGCTGGATG 100 109 ST40_RS15000 3268618 .. 3268635 - -10.5 -3.67976 CTCACGAACTTGAAA GGCGGCC TTCG AGCCGCC TTTTGTCTTTCTCTC 76 229 ST40_RS14975 3260668 .. 3260682 - -2.8 -3.13511 AACATCATTGAAAAT CTCCAC GAA ATAGAG GTGATCCCACTCTGG 43 181 ST40_RS14970 3259439 .. 3259467 - -16.1 -4.11304 TGAACGCACAAACAA GAAAAGCCCGGAC AAG GTCCGGGCTTTTT GCTGTTTGAAGGCAG 100 43 rnd 3253436 .. 3253449 - -2.3 -3.73107 TCACCAAATCGGAAA CAGGG TTGT CGCTG GATCTCGGCAAGGAT 52 178 purM NONE purN 3245737 .. 3245762 - -7.5 -3.92522 CTGCAAGCGGAGAAA GC-CGTCCGGCC TAC GGCCAGATGAGC GTTTCCGTCTCGTTG 71 10 ST40_RS14910 3242269 .. 3242323 - -7.2 -3.08032 GCGCGGCGAAAATCA CGTCA-TCATCGACCGGTC-CGCTGCC TGAC GGC-GCGTGATCGGCCGATGGCCAACG CCGATTAATCCTGGT 57 30 ST40_RS14890 3238171 .. 3238181 - -4.6 -3.80516 AAGGAAGGCAGTAAA CAGC GTG GCCG GCGTGCATCGGCAAT 58 258 ST40_RS14885 3236968 .. 3236979 - -7.2 -4.08692 GAATGCCTTTGAAAA GCGC GACG GCGC AGCAGCCGAGAAGAT 68 168 ST40_RS14875 NONE ST40_RS14870 3233649 .. 3233667 - -3 -3.59946 CCGGTAAGTAGAGAA GGCGGG TGTCATG CTCGCC CCGGGTGTCTTGAAG 49 84 ST40_RS14865 NONE ST40_RS14860 3231847 .. 3231857 - -4.6 -3.05463 ATGTCGCGCATGTAA GGCC CTA GACC ATGCCCTTTCCGGCA 47 19 ST40_RS14855 3231126 .. 3231141 - -4.6 -3.53012 TTTCCGCCGTGGAAA GCTTCC GCAC GGAGGC GGACGTCATTCTGGA 52 64 ST40_RS14845 NONE ST40_RS14840 NONE ST40_RS14835 NONE ST40_RS14830 3225750 .. 3225794 - -3.4 -3.794 CCTGAATTGATCAAA GGGTAGGGAGAGCGCCGCCGG TGTA CCGGCGGCGCTTTTT-TACTT AGTTGAACGAAATGG 54 24 ST40_RS14825 NONE ST40_RS14820 3223046 .. 3223058 - -2.6 -2.61452 AGTAGGGCAAGCAAT CCGC TCATG GCAG CTCCAGGTCTGTGTC 38 141 ST40_RS14815 3222021 .. 3222048 - -14.2 -4.7497 CTCACTCACGAAAAA GGCAATCGACTG TCTC CTGTCGATTGCC TTTGTTTTTTCCGGG 100 56 ST40_RS14795 3218680 .. 3218697 - -3.4 -2.6563 CTTGCGAACAATGGA CG-GCTG GCGAA CAGCGCG CGTGCTGAACGGTCT 40 118 ST40_RS14790 3217098 .. 3217110 - -4.1 -4.35044 GCAGTCAAAGATAAA GCAAA TTG CTTGC ATGGCAAGCCGATCG 64 88 ST40_RS14785 3216515 .. 3216545 - -13.4 -5.18371 TTTCAGAAAAGAAAA GGCGGTG-CATCG CCCGTC CGATGTCACCGCC TGCCTCTGGAAAGTC 100 73 ST40_RS14760 3210253 .. 3210270 - -4 -3.72576 TCTTCGCGCAGCAAA GCGAGG TTGCCG CCGCGC TTGCGATTTCGCTGG 54 474 ST40_RS14750 NONE ST40_RS14745 NONE ST40_RS14740 3205682 .. 3205704 - -6.9 -4.08216 CGAGCTTTGCGAAAA CGCCCGCGG TAACT CCGCAAACG TGCCCGCAGTGTCTG 70 119 ST40_RS14735 3204365 .. 3204379 - -5.6 -4.25104 TCCTGTCGAGCAAAA GGACTG AAA CAGACC GCCCCGCCGTATTGG 69 43 lptF NONE lptG 3198893 .. 3198912 - -2.1 -2.6933 GTTGTCAGAAAAACC GGAAAAG TCATCG CTTTACC CGTCTTCCTGATTCA 38 21 ST40_RS14705 3196387 .. 3196399 - -3.3 -3.67775 AGTCGCATTGAATAA CCATC CGT GCTGG CTTGAGGCCAAACCG 51 154 ST40_RS14700 NONE pdxA NONE rsmA 3193505 .. 3193521 - -6.6 -3.34233 GGATAACCCGGACAA CCTGAA AGCTA TTCAGG CGGGCAAGTGCCGCA 58 71 ST40_RS14685 3191983 .. 3192007 - -3.6 -4.26076 CCAGCTCTATGAAAA GATGCGAGACG ATGT CGTTTC-CATC TTCATTCTGCCGCCG 62 355 rpsF NONE rpsR 3184496 .. 3184518 - -2.6 -4.42464 AAGCCCCGAAAGAAA CGTCTCAAGA TTT TCGAGAAACG CTTAGCTGATCACGA 62 27 rplI 3183768 .. 3183787 - -10.7 -5.63517 CCGGCAAACAAAAAA CGGCGCT GAAGCT AGCGCCG TTTTCTAAAGTCCAC 100 57 ST40_RS14630 3181767 .. 3181778 - -2.2 -3.71284 TGCCGACGAATACAA GATG CGGT CACC TGGAAAAGATTTTAG 50 217 ST40_RS14625 3181440 .. 3181463 - -5.9 -3.18429 CAAAACCGTGACCAA GTGAAGCGC ACTGCA GCGCTCCCC CCGGGAAGTGCCCCG 54 53 alr NONE radA NONE ST40_RS14610 3177950 .. 3177969 - -2.1 -3.73775 CTCAGGTGGACGAAA CATTGGC CGCTTT GCAAATG GTACATCGTCCCGCA 50 141 purF 3176328 .. 3176359 - -15.2 -3.2614 GATCTCTTAGATCAA TTTGCCTTCCGGCG GTAC CGCCGAAAGGCATA AATTGAAGCGGTCCA 95 57 ST40_RS14600 NONE ST40_RS14595 3174879 .. 3174891 - -3.4 -2.72511 TGCATGCTTTCAAAG TTCC AGAAA GGAA GCAAGTTCCAGGCGG 41 7 ST40_RS14590 NONE ST40_RS14540 3164162 .. 3164172 - -5.4 -3.34267 AATCGCAAATGAAGA CATG ATG CATG AGCGTTTTCCTCTCC 53 143 pcaF 3162440 .. 3162472 - -6.3 -5.40072 GGCGTTCGAAAAAAA GGGAGAACTGCAA GGACAGG TTGCAGATCTTCC ACGCGCCCTGTACGA 95 522 ST40_RS14520 NONE ST40_RS14515 NONE ST40_RS14510 3156005 .. 3156025 - -19.7 -5.06414 TGTTGCCAACAAAAA GGCCGCCGG AAA CCGGCGGCC TTTTTGCTTGGAGGT 100 49 ST40_RS14505 3154853 .. 3154884 - -15.2 -2.81464 GGATGAGCCAGCACA GGAACGGTTCTGGC GAAG ACCCGAACCGTTCC TTTTGGGCTGAAAGG 83 83 ST40_RS14480 3150831 .. 3150850 - -6.5 -4.18018 TGCCGCGAGGGAAAA TGACGAT CTTGGT ATCGTCA CACGTGGTCAGAGGG 71 236 ST40_RS14460 NONE ST40_RS14455 3143986 .. 3143999 - -2.3 -2.74784 ACGTGCGAAAAGTGA CGCCC GTGA AGGCA ACTCCGGGATTGTTC 39 423 ST40_RS14425 3137093 .. 3137113 - -3.9 -2.52464 GCCGGCTTGAACCCA TGCTGAGTG CCG CATTCAGCT ACCGTTCAGATATCT 42 81 ST40_RS14420 3136750 .. 3136772 - -4.9 -3.33412 CAATCTCAGACAAGA TTCCCACTC TTTTC AAGTGGAAA CAACTTTGAAGGTAC 51 94 ST40_RS14415 3136313 .. 3136333 - -9.7 -3.9392 CTGGAGCTGAAAGAA GCCTGACCT TGC AGGTCAGTC CGCGTCCAGTGCTTC 80 20 ST40_RS14405 NONE ST40_RS14400 3133848 .. 3133876 - -5.9 -4.16842 CTGATCTTCAAGAAA TCAACCGTCTGGA AGT TCCTGACGCCCGA CCACAAGTTGGCGAC 68 439 ST40_RS14385 NONE ST40_RS14380 3129810 .. 3129822 - -4.7 -3.53012 CGGGTCCCGTGGAAA GCCGC ATC GAGGC CGAAGACCAGGAATT 52 217 ST40_RS14350 3121895 .. 3121929 - -6.4 -3.68366 GTACGGGAAAAGGAA GGATCACGCATCAT GGGGGTG ATGGCGCGTGAACC CAAGACACGCCTTGC 60 434 ST40_RS14340 NONE ST40_RS14335 3118710 .. 3118720 - -4 -3.00908 CACTAAAGAGTAAAG TGAT TGT ATCA ACGAATACCTTAACA 45 151 ST40_RS14330 3117067 .. 3117103 - -12.9 -2.7204 CAATTCAGAAAGTCA GGAGCCGCTACGGGGCA ACT TGTCCCGCAGCGGTTTC ATTCTGCAGGCCCTG 76 24 ST40_RS14310 3112002 .. 3112029 - -9.9 -3.65046 GCGGGACGGCAAGAA CGCATTCATGC TGAAAG GCATGATTGCG GGCAGGTAAACCGGC 74 145 ST40_RS14305 3110887 .. 3110901 - -8.6 -3.61398 TGCCTGCGGGAACAA CGGAAA CGG TTTCCG CCCTGCAGGAGCGGA 64 427 ST40_RS14295 3108667 .. 3108681 - -7.1 -3.92324 GCGGGCAACACGAAA CCGGA TCACT TCCGG TACGCCCGATCATCA 65 211 ST40_RS14285 3106125 .. 3106142 - -2.5 -3.87815 TGCGATTGCCAGAAA GGCTCGC TAAG GCGGGGC GGCCAGTTCAACAAA 52 90 ST40_RS14250 NONE ST40_RS14245 3098363 .. 3098381 - -13.8 -5.60993 CGGGCTACAAAAAAA CGCCGCGA AGA CCGCGGCG TTCGAGAACTGGTTT 100 54 ST40_RS14230 3094826 .. 3094869 - -2.2 -3.62046 CGATGTCTCCAAGAA CCCGGCGACCGATCCCGG CAAGGCCT CCAAGGCTGGTCGGCAGG CGACGGTCCTGGAAA 49 260 ST40_RS14215 3091987 .. 3092015 - -12.5 -3.10677 AATCAAGTGACGCAA GATCGCTCTCGAT CAG ATCGAAGGCGATC TTTTCGCGCGCGTTT 81 65 ST40_RS14190 3087759 .. 3087791 - -2.6 -4.13767 GGTGTCATCGGAAAA GGGGACA-CGGC-TCG CTA CGCCGCCGACGTGCCC CATTGCATTGCAGCC 57 111 ST40_RS14180 3086758 .. 3086771 - -3.1 -3.56594 GCAAATGTTCCGAAA GCGACA GGA TG-CGC CCCGGAAGCGACGGC 49 44 ST40_RS14175 3084924 .. 3084943 - -11.4 -5.37043 ACGCCACACAAAAAA GGCAGGTC CTGA GACCCGCC TTTTCTGGTATTCGG 100 57 ST40_RS14165 3083583 .. 3083597 - -7.1 -3.45776 CTAAACTTACGAGAA GGCAG TGGCG CTGCC TGCCGAAAGAAGCTT 58 2 ST40_RS14160 3082647 .. 3082677 - -3.3 -3.41222 TTTCAACCGGAAAGA GAGGCTCGCCCA CCAACATT TCGGC-AGCCTC CTTGAACATTGCCGT 47 40 ST40_RS14155 3081988 .. 3082000 - -2.6 -4.63527 TCATCACGTGAAAAA CCGA CTTGT CCGG ATGCTATTTTGCGAC 65 43 ST40_RS14150 3081594 .. 3081619 - -3.1 -3.03124 GCCCATTGGCCAACA GGCGCTGATCA GTCA TGTTCCGAGCC TCCATTTGCGAGCAG 43 8 ST40_RS14145 NONE ST40_RS14140 3079646 .. 3079668 - -14.9 -4.2349 CCTCGACACGCAAAA CCCCTCCCT ATTAA AGGGAGGGG ATTGGGGTGGAGATT 100 116 ST40_RS14135 3077436 .. 3077459 - -6.6 -2.61274 GCTAGCCGAAGGAAC GACACCGTCA ACCT CGGCGGCGTC TCCGCCTGCGCTCTC 51 9 ST40_RS14125 3075571 .. 3075581 - -2.4 -3.53012 CTTGTTGCCTCCAAA CGGC AGG GCGG ATCAGCTGTCCGTCC 47 27 ST40_RS14120 3074795 .. 3074807 - -5.5 -3.61398 GCGCTGCCTGAAGAA TACCG GTT CGGCA TTTGCTGCGCTGTAG 57 331 ST40_RS14110 3073475 .. 3073502 - -5.7 -3.07994 GCGAAGCTGATGCAA TGGGGAAAA TTAGCTGTCT TTTTCCCCA GAAAGCCCGCGATGC 52 7 ST40_RS14105 3073033 .. 3073045 - -9.1 -3.27259 GATACAGACGACGAA CGCGA CAG TCGCG AGCGCGAATATCATT 65 174 ST40_RS29690 NONE ST40_RS14100 3071187 .. 3071204 - -14.1 -5.13473 AGTACAGGCAAAAAA GCCCGCC AATC GGCGGGC TTTTCGTTTGTTCAG 100 51 ST40_RS14090 3069318 .. 3069334 - -10.1 -4.06419 CGGCTGGAGAAAGAA CTCGGCC GCA GGCCGAA GCACTTTGCCTATCC 80 283 ST40_RS14080 3067109 .. 3067126 - -10.5 -2.91276 GGGCCGCGCAGAAAC GGCGACG GGCA CGCCGCC TGAGGAAGATGTTGG 68 62 ST40_RS14070 NONE ST40_RS14065 3062491 .. 3062503 - -6.9 -3.53343 AATCTGTGCCCCAAA GCGGA TGT CCCGC CCGCAACAGGCTTTG 60 80 ST40_RS14060 NONE ST40_RS14055 NONE ST40_RS14050 3059244 .. 3059262 - -2.4 -5.52384 TTCTCATCAAAAAAA TACTCGGA ATA TTCGAATA CGAACTGGTAGCTAT 85 293 ST40_RS14045 3057811 .. 3057827 - -6.5 -2.57944 GATGAGCATACGAAG GCTGCAA CTC TTGCTGC AATAGAGAACGGGCC 49 348 ST40_RS13995 NONE ST40_RS13990 NONE ST40_RS13985 NONE ST40_RS13980 NONE ST40_RS13975 3043811 .. 3043829 - -13.8 -4.85782 TTCGGCAAAAACAAA CCCCGCCA GAA CGGCGGGG TTACGAGAGACTGCG 100 55 ST40_RS13960 3040814 .. 3040829 - -4.6 -2.94759 GAAGGGCAATAATTA GCGGCA CGCA TGCCGG GAGCAAGTGCAATAG 46 47 ST40_RS13955 3039300 .. 3039333 - -3.1 -4.52589 TTGCCGCACAGAAAA CGCTTGTTGACCTCGT CGG ACGTGTTCAAC-AGCT GGCAGGCGCTGCGCG 68 265 ST40_RS13945 3037781 .. 3037805 - -9.9 -3.32844 GTTGCCACTGCAGAA CCGGCACAGGC GGA ACCTGCGCCTG CCCCTGCGATGATTT 68 307 bamE 3032961 .. 3032981 - -19.7 -4.85782 CCCCGGAAAAAGAAA GCCCCGGCC GAT GGCCGGGGC TTTTTGCATAGGGTT 100 53 hemB NONE ST40_RS13820 3014140 .. 3014165 - -8.3 -3.34013 TACCCGTGTAATGAA GGACTGAGGTGG CAG CC-CTTCAGTCC ATCCGCTCGCCGATT 64 19 ST40_RS13815 3013352 .. 3013362 - -2.4 -3.1855 TGCCGGAATATTGAA CCTG TCG CTGG CTCTCTTGAACTGAC 43 42 ST40_RS13805 NONE ST40_RS13800 3009940 .. 3009951 - -7.2 -2.87564 CCATCCTTCGAGACA GCGC TGAC GCGC TTCGTCAGGATGAGG 56 105 rpoZ 3007647 .. 3007687 - -11.2 -5.03994 CGGGACAGACAAAAA TCGCCGGAAGCGC--CGAGG AAA CCCCGTCGCGCTTCAGACGA ACTTGTGAACTCAAA 100 41 ST40_RS13780 3005351 .. 3005364 - -8.1 -2.52543 ACCGTTTGTAATCTA GCCGT TCAC ACGGC TGACGCTGGAAACAT 56 9 pyrE NONE ST40_RS13770 NONE acpS 3003490 .. 3003500 - -4.6 -2.59267 CGCAATGAGAGGAAG GCCC TTG AGGC TGGGCTTTCAGGGGG 44 33 lepB NONE rnc 3001812 .. 3001830 - -2.4 -3.60296 CAGCGGCATGTCAAA TC-GGCC GGTGGG GGCCTGA AAGCCGTTGTCGTCA 47 88 era NONE recO 2999844 .. 2999873 - -5.7 -4.05714 ATCCGCAAGGAGAAA TGGACACGACA AGAGAATA TGTCGTGCCCG ACGGTCATCTGTTTG 65 216 parC 2994300 .. 2994320 - -2.4 -3.05384 TGTCTCCTCATTGAA CTGGCCGT CCCTC AAGGCCTG CGCCGAGTACCTGAG 42 363 ST40_RS13720 2993301 .. 2993318 - -4.1 -3.54424 TTCGAGGCCTGCAAA GTCTGAA GGTG TTCAGGC ATGCATCTTCGCGCC 51 20 ST40_RS13715 NONE ST40_RS13710 2991332 .. 2991347 - -4.6 -4.34488 GAGACTGAGAAGAAA CGCGAT TGGC AGCGCG AAAAGTCCCGCTTGA 68 245 ST40_RS13695 2988570 .. 2988587 - -14.1 -4.18197 AGGTTTGATGGAAAA CCCGGCG GAAA CGCCGGG TTTTCTTTTGTCTTG 100 146 ST40_RS13665 2974580 .. 2974613 - -10.1 -2.54523 CCACACGTGAAGGCA TCCGCAAGGCCGAGG CACG CCACGGCCTCCCGGT AACAGGACGTCCGTC 60 125 ST40_RS13635 2968065 .. 2968101 - -7.2 -4.11216 TGTGCAGCGGGAAAA GAGGGCACGGCTCACCT GAGC AGGTGT-CCGCGCCACC TGTGGGATCAACGGT 74 33 ST40_RS13630 2967438 .. 2967462 - -9.3 -2.74192 CACCGCGCAAGACGA GTTACCGCATA ATT TATGCGGCATC CTGTTCTTCACGGAC 60 14 ST40_RS13625 2966746 .. 2966758 - -3.3 -2.52896 CCACCCGGCAAGGCA CCAGG CAC CCTTG AGCGGCAAAGTCTCT 40 48 ST40_RS13620 2966214 .. 2966249 - -6.9 -3.23274 CCTGCCAGAACTGAA TTGCCAGATGAGGCTG GACGG CAGCCTCAG-TGGCAG AAATCGCTAACGGCA 56 46 ST40_RS13605 2963111 .. 2963155 - -11.4 -3.4277 ACCGAATATCCAGAA GCCGAATGTGCAGC-GACCGG CGAC CCGACCTGCCACACGTCCGGC GGCACGACCCCAGGC 74 204 ST40_RS13595 2959605 .. 2959623 - -5.8 -3.21276 CTTCTGGCCAGAACA CCTCGGCG AGC CGCCGGTG CCTCAGCTTGTCGTG 50 387 ST40_RS13580 NONE ST40_RS13575 NONE ST40_RS13570 2955250 .. 2955268 - -11.6 -3.28924 CACTTTCCTCCAGAA CGGGCCGG TCA CCGCCCCG TTTTCCGCCCTTATT 74 36 ST40_RS13565 NONE ST40_RS13560 NONE dctP 2951768 .. 2951781 - -3.8 -3.29511 CTGATCGGCGCAGAA CTCG CGTGAT CGAG TGCTGGGCGGACCGG 47 193 ST40_RS13545 NONE ST40_RS13540 2948844 .. 2948869 - -11.1 -4.77165 GCCCGCACAAGAAAA GCCCCGGCCTT TGAA AAGACCGGGGT TCTGCTTCGTTATAT 100 67 metG 2947154 .. 2947182 - -14.6 -2.75844 CGTGCGATTGGAAAT CTGAAGCGCCCC TGCTC GGGGCGCTTCAT TTTTTTGATCAAGCC 83 50 egtB NONE egtD 2942318 .. 2942356 - -8.8 -3.15579 TGAACCTTTGAGTAA GTGGCGGGTGAGGC CTTGAAACTCT GCCTCACCCGCATC TGCTAGGTGACCCAA 63 52 ST40_RS13500 NONE ST40_RS13495 2939159 .. 2939183 - -19.3 -4.08706 GCCGCAGCAGAGAAA CGGGCCCGGAC ATG GTCCGGACCCG AAATGTTGGCAAGGA 100 41 ST40_RS13490 NONE ST40_RS13485 2935887 .. 2935920 - -4.4 -3.01712 TCGCCTGGCCGAACA TGCGGCCGCTCGGC ACGGAG GCCGAGCGATTGAA GTCCGCGCTGCTGGA 46 55 ST40_RS13475 NONE yghU 2930275 .. 2930311 - -16.6 -3.04398 GGTCGTGCGTAAAAC CCCGGCAGCGGTTCCT GGGGA AAGAGCCGCTGCCGGA CGAAAATTTATTCTG 100 33 ST40_RS13455 NONE ST40_RS13450 2926845 .. 2926868 - -17.4 -5.14563 TCTGTCATCAAAAAA GCCGCCCCGG TCTC CCGGGACGGC TTCTCGATATCTCGT 100 50 ST40_RS13415 NONE ST40_RS13410 2917948 .. 2917959 - -2.2 -2.78495 TCATCATGAACAGGA CGGCC ATC GGC-G AAAACTCTTCAATCG 39 34 ST40_RS13405 2916593 .. 2916604 - -4.4 -4.57073 TAGCTGTGCCAAAAA TTCC CTGC GGAA TATTGGCACAGTCAA 71 98 ST40_RS13400 2915017 .. 2915034 - -2.5 -3.53224 CATTTCGCGCTGAAA TCCGGCG ACCC CGTCGGC ATCGCGCTGGATCTG 47 146 ST40_RS13230 2879432 .. 2879457 - -4 -3.52341 AGCGCAACAGCAGAA CCAGGCACC-TG CGTC CACGGCGCC-GG TTGAAGCGCCGGTGA 49 125 ST40_RS13205 2873038 .. 2873048 - -6.8 -3.35798 ACTTGGCATCTACAA GACC GAA GGTC TTTTCGAGAGGGCGG 56 365 ST40_RS13195 2870843 .. 2870870 - -18.4 -2.82623 TTGCCTGCACAATGA CGGCCGGACGCG GAGA CGCGTTCGGCCG TTGACGTTTTTGAGG 95 250 ST40_RS13160 NONE ST40_RS13155 NONE ST40_RS13150 2861094 .. 2861112 - -11.6 -3.29043 AAGGCGGCGGGAGAA CTCGCCGG TAA CCGGCGGG ATGTCGGTGTTCTTG 72 411 ST40_RS13140 2858434 .. 2858453 - -4.2 -3.55071 CGAGACGCGCGCAAA CGCGC-TCC TCA GGATGCGGG AGCGGTGGAAGTGAG 52 69 ST40_RS13130 2856485 .. 2856496 - -4.4 -3.64703 TCGCCGCCAGTGAAA TTCC GGCA GGAA TAGCAACATTGCCGT 55 45 ST40_RS13090 2848378 .. 2848396 - -5.8 -2.78384 CCCCTGGCGAGCATA GCGGGACC CGG GGGCCTGC CCATTTCCAGAGTAT 50 304 ST40_RS13060 NONE ST40_RS13055 2838409 .. 2838455 - -10.1 -4.7657 CAAAAATCGGAAAAA GTCGCCGCAACACCC-CGGGAG CAAG CTTTAGAGGGTGTTGCGGCGAA GGCGGGTTCGAAAAT 95 50 ST40_RS13050 NONE ST40_RS13045 NONE ST40_RS13040 NONE ST40_RS13035 2834812 .. 2834835 - -19.6 -4.07568 TCGCTTGCGGGAAAA GCCGGTCCGG AAAT CCGGACCGGC ACGGCGCTGTTTCTT 100 40 ST40_RS13030 NONE gph 2833487 .. 2833514 - -9.2 -4.15543 CAAACATGTCGAAAA CCTG-TGTCAGGC AGG GGCTGACAACAGG TTCTGCGCAAGTGCC 80 4 ST40_RS13020 2831541 .. 2831564 - -15.4 -4.07687 ACCCCTTCCTGAAAA CATGGCTCGA TTAT TCGAGCCATG CGGCAACGGATCAGG 100 507 ST40_RS12980 2818584 .. 2818611 - -4.9 -4.56775 AGCGCGGTGGAAAAA GTGACAAGGCGT AAAAA ACGCCTTGA-AC TGTGAGGCTTTTATT 71 329 ST40_RS12970 2817404 .. 2817424 - -11.1 -3.10464 TTATGAAGGGGAAGA CGGGAACTG GAT CTGTTCCCG CGGACGGCGGCAGGC 72 113 ST40_RS12965 2816506 .. 2816540 - -12.1 -3.36175 AACCGGTATCGACAA CCTGACGCGGCAGCA CAGTT TTCTGCCGCGTCCAG TTTCCGGCCCCTTGC 80 55 ST40_RS12955 2815182 .. 2815213 - -6.6 -3.76224 TTGCGACGGAGGAAA GGCC-AAATCGACAG GAT CTGGCGATTTCGGAC TTTGTTCAGCCGTTT 62 39 ST40_RS12950 NONE ST40_RS12945 2813766 .. 2813778 - -2.6 -4.65895 GTTTCCATCGAAAAA GCCC GCCCG GAGC ACCTTCGCGAGATCG 68 455 ST40_RS12910 2807977 .. 2807992 - -3.2 -2.76696 TGGCTTTGGAAGAAC CTCTTG TCAT CAAGCG TTGGCACCATTGTCG 41 19 ST40_RS12905 2806744 .. 2806766 - -15 -3.40899 AAGCTTTCAGGACAA TGTCCACTGA AGC TCAGTGGACA TAACTGTTCAGTTGC 95 79 ST40_RS12875 2801891 .. 2801906 - -4.6 -3.29511 CTGACCGGTGGACAA CCGGTT TCGC AGCCGG CAGCAGTTGCTTCAA 49 294 ST40_RS12870 2800019 .. 2800037 - -6.6 -2.8547 ACTGCTGAGACGAGA CTGCAGCA ATT TGCCGCCG GACTAATGCCCTTAA 52 412 ST40_RS12860 2798971 .. 2799003 - -11.2 -3.53091 AGCGGCTTTGGGAAA GTTGCCGGGAC-GCC AACA GGCTGTCCCGGCTCC TGACTTCACCTGTTG 77 31 ST40_RS12850 2797948 .. 2797986 - -14.5 -5.22006 CCACTAGAACAAAAA CATCCCGGCGGGACGGT GGGAA ACCGTCCTGACGGGGTG CGTATCATTCACTTC 100 34 ST40_RS12805 NONE ST40_RS12800 NONE ST40_RS12795 NONE ST40_RS12790 NONE ST40_RS12785 2782249 .. 2782263 - -2.8 -2.92499 TTCAGAAAGAAATAT CTCTTA AAA TAAGTG TTTCACGTCCGGCCA 42 14 ST40_RS12780 NONE ST40_RS12775 2780611 .. 2780631 - -8.9 -2.56271 CTCCCACCACAAGAT GCGCGGCAA GTA TCGCAGCGC CGTCTACGTTTATGA 56 318 ST40_RS12765 2779229 .. 2779263 - -10.6 -3.54424 CCGGATGTCCTCAAA GCCGCCATCGACTTTG CGG CCAATCCGAAGGCGGC GGAGAAAAGGGAAGC 74 293 nthA NONE nthB NONE ST40_RS12735 NONE ST40_RS12730 2774425 .. 2774435 - -3.2 -3.8125 CCTTCAAGGAAAAGA GCAG TCT CTAC CTCGGGAATTGAGTG 54 54 ST40_RS12720 2773031 .. 2773065 - -19.5 -3.03159 TGAATTTGGCGAACA CAGTCCTGCTTCCTC GGTCT GAGGAAGCAAGACTG TTTTGATTCCAGGGG 100 128 pepN 2758529 .. 2758569 - -6.1 -5.00196 CGTCAAAGAATAAAA TGGTTAACGCAAATCCGGA TTT TCCGTTCTTTCGTTAACCT TTCTCAGTATTGCAG 84 42 ST40_RS12665 2756070 .. 2756080 - -4.6 -3.59979 CGCCTGGAGGGTAAA GCCC TTC AGGC GGCTTCCTTGTCGGC 52 20 ST40_RS12630 2746009 .. 2746022 - -3.1 -4.57341 AAGTCGCCTGAAAAA TATGC AATT GCACA AGTTCTAGGCGAAAA 67 119 ST40_RS12625 NONE ST40_RS12620 2744030 .. 2744041 - -3 -3.99153 GCAGGATAAAAAAAG GATA AATC TATC GCGCCATCCGTATTA 56 165 ST40_RS12615 2742685 .. 2742697 - -3.4 -3.09492 CGCGGAACGGCAAGA TCGA CCGGT TCGA GCGCTTGATCACGCT 43 199 ST40_RS12545 2727234 .. 2727244 - -6.8 -3.60627 CCAGCGCATGGCAAA CCTG CTT CAGG TGTCCTCGGCCTTCG 60 336 ST40_RS12535 2724970 .. 2724980 - -2.4 -4.15044 GCCTGTTCGAACAAA CCCG GGC CCGG CTCGTTCAAGCGGTT 60 298 ST40_RS12525 NONE ST40_RS12520 2722038 .. 2722051 - -2.3 -4.07568 CGTCCTGCCGGAAAA GATGC GGGT GCGTC AGAACGAAGTCGAGA 57 417 ST40_RS12505 2719573 .. 2719585 - -9.1 -2.57274 GGCTATAAGCAACAT GACGG CAA CCGTC GCGAGGCCTGCAAGA 59 245 ST40_RS12500 2718010 .. 2718026 - -6.5 -4.56597 TCGGCGCTGGAAAAA GCGTCAG CCG CTGACGG GTTTGAGCTTTGCCA 78 12 ST40_RS12495 2717335 .. 2717361 - -8 -3.02144 CTATTTGCGTGAAGA CCCACATCGT AGGGTGA ACGATGAGGG TCGTTCCTCCCCAGA 60 255 ST40_RS12490 NONE ST40_RS12485 2715782 .. 2715801 - -4.8 -3.63569 GCAACGGGCGAACAA GGCGCTGC TGCT GCCGTGCC TGCAAAGGGCCAACT 54 185 ST40_RS12470 2713054 .. 2713093 - -8.5 -3.22409 CAACGAGGAACTCAA CATGTCCAGCAGGGC TGCGGAGATT GCCCTGCGGGTCACG TCATCTCCGCCCGAA 57 495 ST40_RS12460 2712122 .. 2712156 - -14.4 -4.56597 GGCTGCGGCCAAAAA GGAAAGAGCGATCAAC ACT GTTGATCGCTCTTGCT TGGAACCGATTTGAG 100 42 ST40_RS12455 2710388 .. 2710402 - -8.6 -3.53012 GCCTGTTTCTGGAAA CCTTCA CCT TGAAGG ACGACGCAAGGCCCC 65 57 ST40_RS12435 2704344 .. 2704362 - -3.1 -3.71378 GACCGGAGAGGTAAA CAAATCC CGGAC GGATTAG AAGAGGTCTGGTGGA 51 59 ST40_RS12430 2703734 .. 2703750 - -5.1 -4.07568 GCTCGGCCTTGAAAA CACGACT TTC ATTCGTG TCTATCTGACTGAAT 61 253 ST40_RS12400 2695833 .. 2695854 - -7.9 -3.64822 ACTTCCGCAGGCAAA CTGGACCCG CTGA CGGATCCGG GCGAACAGCCGGTGT 65 267 ST40_RS12385 2692895 .. 2692921 - -4.4 -2.52623 CCGCTGGCAGAAGAG CTGCTGCAGGC CTGGTC GCCTG-AGCCG GGTTGGAACAGCCTG 42 393 ST40_RS12375 2691175 .. 2691191 - -6.5 -3.96216 TTGTGATTGAAAGAA CCGCG TCAAGTT CGCGG TCATGTCACATCACC 68 119 ST40_RS12370 2689916 .. 2689932 - -6.5 -3.3482 GAAGGGGTGAAGGAA GGCGACA GCC TTTCGCC GGTTGCTCCCTGGCG 56 321 ST40_RS12345 2684029 .. 2684042 - -8.1 -3.53224 GATCCGGGTTCGAAA CACGC CTTG GCGTG ATCTTCAAAGGTTAC 65 187 ST40_RS12340 2683300 .. 2683328 - -11.6 -2.78384 CCTCCGCTGACGATA TGGCCTGCCGGG TTTTG CCCGGTGGGCCA TATCTGTTTGCGCAG 69 159 ST40_RS12330 2681466 .. 2681476 - -8.2 -3.03781 GGAATTGAAAGCAGA CCGC CAC GCGG CTCAGTCAGGCGAAG 56 440 ST40_RS12275 2666952 .. 2666968 - -5.7 -3.53224 GATCTTCTGTCGAAA GCGCCGG AAA CCGATGC GATCCTGTGCAACAA 55 341 ST40_RS12265 NONE ST40_RS12260 2664462 .. 2664481 - -16.4 -4.36914 GCTTCTTTTACAAAA CGGGCGCC CGAA GGCGCCCG CCAGGTAACCACATT 100 49 ST40_RS12255 2663833 .. 2663853 - -2.4 -2.74523 GCATCGCGAACATGA GCAGCGTG CCGGT CTCGATGC CGAGCCCTTGAAGGG 39 56 ST40_RS12250 2662532 .. 2662553 - -13.7 -5.04249 TCGCGAAAAAAGAAA CCGCCCGTA TGTC CACGGGCGG TTTTTGTTTTTGCCT 100 40 ST40_RS12200 2648427 .. 2648437 - -5.4 -3.57263 AGTTCGAGGCGGAAA GAAC CGG GTTC TTTCCCTCGATCCGG 57 433 ST40_RS12170 2641761 .. 2641792 - -18.8 -6.20267 GGAAAAACAAAAAAA CCGGGCTCGCACAA GGGT TTGCGCGAACCCGG TTCGTGAGGTTATGT 100 48 ST40_RS12165 2640967 .. 2640979 - -5.5 -3.57971 ACACGGACCCGGAAA CCGAT GTG ACCGG TATCGCTGCGCTGGT 57 373 ST40_RS12150 2638062 .. 2638079 - -5.5 -2.78935 AGATGGGGCAGGATA TCCCCAT TTGG AAGGGGA CAGATTTGAACTCGT 47 118 ST40_RS12145 2637251 .. 2637273 - -9.9 -2.72144 CGACCTGCTGCAAAC GGCATAACC TGGCC GGTCATGCC TATCTGACGTTGATC 61 109 ST40_RS12125 NONE ST40_RS12120 2632401 .. 2632425 - -2.7 -3.59979 GCGGGTTATTCCAAA CGGCAGGCACT TGA AGTTCTTGTCG GCATCGCCGCCAAGA 49 168 ST40_RS12110 2630965 .. 2630975 - -4.6 -3.64703 GTGCTGGCACCGAAA CCGG GAG CCGA ACTGGCCCAGGAGGC 54 183 ST40_RS12100 2628630 .. 2628653 - -8 -4.36595 GATGGAAATGGAAAA GGGCGGTACC TGTC GGTGCCGCCT TTTTTGTCGAGTGGT 81 42 ST40_RS12090 2626316 .. 2626348 - -5.5 -4.50159 GGCAACGCAAAGAAA GACCACAGCCGACAA ATA TCGCCGTCTGCAATC TCGCGTTTTTTTCTC 70 327 ST40_RS12085 2625403 .. 2625415 - -9.1 -4.62471 GTGAACCCTCAAAAA GCACC TCG GGTGC GCGGGCGGTCAATCC 89 111 ST40_RS12055 2617084 .. 2617098 - -2.7 -3.03151 GCTCGGAAAGGAAAC GCGGC AGGTG GCGGC AGGTTCCGCCAGAAC 43 197 ST40_RS12050 2616291 .. 2616325 - -7.6 -2.78384 TTGCTCCGCAGTAGA GGCGGCGGAGGCCCGA GGC CCGGGTCTCCGCTGGG CTTTGCCTGGTTTGC 55 89 ST40_RS12025 2612503 .. 2612532 - -15.9 -5.58454 GCTACATCAAAAAAA GCACCCGGCA-AAT GAA ATTCTGCCGGGTGC CAGTCATCTCAAATA 100 50 ST40_RS12020 2611136 .. 2611171 - -6 -3.94 GGAAGGTGTAAAGAA CTGGAGAGCGCCCGGA CAGG TTCGGGCGCTCTTGAC TATGAGACCCTTAAT 65 36 ST40_RS11965 2597122 .. 2597134 - -6.3 -3.28712 CGCCGGGTTCGACAA GATGT TCA ACATC TATGTACGCACCTTG 52 266 ST40_RS11945 2593726 .. 2593745 - -7.8 -3.12351 CCTGGCCACAGCCAA CGCGCC ATGCCTTG GGCGCG CTCCTGATGGAAGCC 56 369 ST40_RS11930 2589884 .. 2589905 - -10.8 -4.85177 AAACGATACGAAAAA GGCCGCGG TTTGAG CCGCAGCC TTTCTTGCAAAAACG 100 57 ST40_RS11925 NONE ST40_RS11920 NONE ST40_RS11915 2586172 .. 2586184 - -10.5 -3.28924 GATCTCCGCCTACAA GGCCG CGC CGGCC GCGGTCGTGGCACCG 68 491 ST40_RS11885 NONE ST40_RS11880 2578063 .. 2578078 - -4.6 -3.73224 GCATGCTCGACGAAA TCCGCC TGTC GGCCGA GGAAGCCGCCAAATC 57 217 minC NONE minD NONE minE 2575563 .. 2575582 - -15 -4.34402 GGGCTGATAGGAAAA GACCGGCC AGAA GGCCGGTC TTGAACGTCAGGAGG 100 33 ST40_RS11845 2571212 .. 2571235 - -6 -4.57569 CGAGCTTCTGAAAAA GCACA-AGCTG TTT CAGCTCTGAGC TTCACTCGGATGTAT 75 98 ST40_RS11830 2568147 .. 2568182 - -11.8 -4.07568 GTCTCTTCTTGAAAA GGGCCGGAACCGC-CGC GTG ACGTGCGGTTCCGGCAG TTGAGCCCCGGAGCA 91 146 ST40_RS11825 2567604 .. 2567614 - -2.4 -2.83894 ATCAGGATCATGAGA GGGC CTC GCCG CCATCTGAGTGCGCT 39 7 ST40_RS11820 NONE ST40_RS11815 NONE ST40_RS11810 2565212 .. 2565229 - -4.8 -2.72839 AATCATCCGCAATCA CGCCCA GCTTCA TGAGCG GATCCCCTTGAGCGG 45 17 ST40_RS11805 NONE ST40_RS11800 NONE ST40_RS11795 2562018 .. 2562061 - -3 -3.61398 TCCCTTTGCCAACAA TTTCACGCCCGGATTGACGA CAAT TCGCCAACCCCGGCAACATA TCGGCGAAAAGGCCA 49 185 ST40_RS11785 NONE ST40_RS11780 NONE ST40_RS11775 2557302 .. 2557332 - -14 -2.74263 AGGTGAGGTGGAAAG GGCCGGGGTCCC ATCGCGA AAGACCCCGGCC TGCTACGTCCCGAAG 83 43 ST40_RS11770 2556035 .. 2556047 - -7.7 -4.19483 TTACATACATAGAAA CCTCA TGC TGAGG AAGCGCGGATGCGCT 74 182 ST40_RS11765 2554746 .. 2554767 - -14.4 -4.67635 CTGAAAACGACAAAA GCCCGGGC AGCAGA GCCCGGGC TTCGTAAAATGCGAC 100 52 ST40_RS11760 NONE ST40_RS11755 NONE ST40_RS11750 NONE yjfF NONE ST40_RS11740 2548954 .. 2548982 - -8.1 -2.70932 GTCCGTCTCGAAGGA TGGGCACCTTGCT CTG AACAAGTGGCCCA TCCTTCGAGACGCGC 57 86 ST40_RS11700 2537986 .. 2538005 - -15 -3.31792 TGATGACTGTCAGAA GCGCGCCA TTCG TGGCGCGC TTCTTTCGTTTGCAC 95 493 ST40_RS11640 2529813 .. 2529838 - -7.5 -4.10429 AACGATTTTTGAAAA CCGGTTCATGC ACGT GCAGGAACTGG CCCGCCTCGGTGCCC 68 347 ST40_RS11625 2527696 .. 2527707 - -2.2 -3.86015 CAGCCTTTGTACAAA TCGG CTGG CCAA TACCCAGTCAGTACC 52 70 ST40_RS11605 2521630 .. 2521668 - -8 -3.63895 CGCAAGGAGGCGAAA GCAGCAGCGACGACGCTG GCA CGACATCTCCACCGCTGC GTCGCTGACGTCTCT 64 319 ST40_RS11595 NONE ST40_RS11590 2519078 .. 2519088 - -2.4 -4.07647 ATACCGCAAACCAAA GACG GAC CGAC AAGACCGCAGCTGCC 56 78 ST40_RS11575 2514753 .. 2514763 - -3.2 -3.54129 CAGATCGTTCTGAAA TACC AGC GGCA TGAGAAATCGACTTT 49 133 urtA 2508444 .. 2508482 - -2.3 -2.70525 GGGTTTGAAACGAAG GGGACGGGCGCTGCGCAGG CTG CCTCCAC-GCAG-CGCCCC GGTTATGCCCGCTTT 39 81 urtB NONE urtC NONE urtD NONE urtE NONE ST40_RS11535 2503456 .. 2503469 - -9.5 -3.81137 CCTGAAAGACGGAAA GCCGG CTCG CCGGC GGAAGGGGTTTGAGA 76 73 ST40_RS11530 2502794 .. 2502804 - -8.2 -3.95435 TTCGGCAAAACACAA CCGC CGC GCGG CTTTGTGGTTGCCCT 69 280 pseB NONE pseG NONE pseC NONE pseI 2483134 .. 2483154 - -2.5 -2.64322 AGCTTAGGGAAAGAC TTCATGCGA CGC CCGCCTAAA TCCATCACACTTCAT 38 144 ST40_RS11475 NONE ST40_RS11470 2480246 .. 2480256 - -2.4 -3.33696 CTGTGGTGTAATCAA CGCG GAG CGTG CGCTGTCGATCTGTT 45 52 ST40_RS11465 NONE ST40_RS11460 NONE ST40_RS11455 NONE ST40_RS11450 2476135 .. 2476147 - -4.8 -3.97102 AGTGAAAATCAACAA CCAG TCCCT CTGG GATGCCTGTCCGTTG 60 6 ST40_RS11430 NONE ST40_RS11425 NONE ST40_RS11420 NONE ST40_RS11415 NONE ST40_RS11410 2467016 .. 2467043 - -6.3 -3.55444 GGTGGATCGCCCAAA GCATGCTAAAG GGCGGA CTTAAGCACGC GTTGGCTTTCCGCAG 57 3 ST40_RS11405 NONE ST40_RS11400 2464774 .. 2464787 - -2.4 -3.03124 TTCGATTGTGTAATA CTTC GAAATT GAAG AAAATTGCTCCATCT 42 104 ST40_RS11395 NONE ST40_RS11375 2457776 .. 2457817 - -2.3 -3.79043 CATGATCAAGGTAAA GGCGCGGATCGGTGAGGCT GAATGG AGCACCACC-ATCTG-GCC GGACAAGGCGTCCGG 52 216 ST40_RS11340 NONE ST40_RS11335 NONE ST40_RS11330 NONE ST40_RS11325 NONE cbiE NONE cobI NONE cobJ NONE cobM 2445864 .. 2445877 - -5.3 -3.70902 TCTCGGACAGGCAAA TCATC GCTC GATGA ACCTGCGAAGCGTTT 58 110 ST40_RS11300 2444958 .. 2444980 - -4 -4.18018 CTCGGGTACCGAAAA GTCATGCCAC TCC GTGGCCTACC CTGGCAAATGCCGCT 62 194 ST40_RS11285 NONE ST40_RS11280 2440657 .. 2440674 - -4.9 -3.21912 TTCGCAAGCGATGAA CTGG-ACA GCT TGTGCCAG GGGATCAACGAGGCA 48 328 ST40_RS11265 NONE ST40_RS11260 NONE ST40_RS11255 2434986 .. 2435001 - -3.2 -2.73875 TTTGCGGCAAGACTA CGGTGC TCCG ACACCA CGAAGCTCGCTGTCA 41 67 ST40_RS11250 2432493 .. 2432503 - -5.4 -3.05384 GCCCTGTTGACCGAA TTCG TTG CGAA AGTCTCCGCTTCTAG 49 72 ST40_RS11240 2429567 .. 2429581 - -4.2 -3.61398 GTTTTCGGCCAAGAA GCGCTT GAA AAGCTC CCTCTATGCCTTCGC 54 97 ST40_RS11230 2427112 .. 2427129 - -7 -2.78384 GCTCGGCCGAGGACA GCATCG CCATTT CGATGC GCCCGAGGTGAGTGT 50 294 mdoH 2415368 .. 2415387 - -10.7 -4.65895 TCTCTGATGCAAAAA GACCGGC TGTGAG GCCGGTC TTTTGGTTCGTATGC 95 138 ST40_RS11095 NONE ST40_RS11090 2398742 .. 2398770 - -5.7 -2.90496 GGGCCTTTCAAAGGA GGCGGGCCCCGGC ACA GCCCCGGCAAGCC TTGCTGCGGGGCCTC 51 112 ST40_RS11085 2397673 .. 2397690 - -10.5 -4.8048 TGTTTATACGAAAAA GGCCCGC GTGC GCGGACC TTTCTGAAGGCTGTG 100 119 ST40_RS11080 2397177 .. 2397194 - -12.7 -5.2166 GAACAATCTAAAAAA GCTCCGG TTTT CCGGAGC TTTTTTCGTTTCTGG 100 61 ST40_RS11070 2394565 .. 2394575 - -8.2 -3.40639 AAGCGCACCAAGGAA GCCC TGA GGGC CGCAAAGGCACGTGG 64 303 ST40_RS11050 2392752 .. 2392769 - -14.1 -4.66537 TCTCTCAACAGAAAA CGGGCCC CGAA GGGCCCG TCGAAGAAGTCATGT 100 52 ST40_RS11045 2391305 .. 2391348 - -13 -3.85698 CTCGGCGTGGATAAA CTTTTCCGGCGGCTGGCAAG TTCT CCTGTCAGCCGCCGGATCCG CGCATCAATGCCTTT 90 10 ST40_RS11035 2389819 .. 2389860 - -9.4 -3.14211 AGGCCGCTTTACCAA GGTCCGGATCAGCGCG-CA GATTT TGTTGCGCTTGTCCGGACC GACAGAGCGAGTGTG 63 53 ST40_RS11025 2388045 .. 2388077 - -11.4 -3.61398 TGCTCGCTGGAACAA CGTTCAGTTCAACCG GAAC CGGTTGAAC-GCACG AAGAATGCGTCAGAA 77 35 queG 2386749 .. 2386762 - -2.3 -3.3761 TGGCTCCAATAAAAT GATCG GAAT CGAGC GGTTTGAACGAGATC 45 140 ST40_RS11015 2384509 .. 2384527 - -17.4 -5.15969 CCTGAAGGCAAAAAA GGGCGGCC ACT GGCCGCCC TTTTGGTTTTCGCAT 100 58 ST40_RS10920 2365054 .. 2365094 - -10.6 -3.03159 TCAAGGCGTTCAACA CTCTTCCTGT--CGCCACGA TGA TCGCGCCGTTACAGGAAGAG CGTTTGCGGCGAGTC 64 372 ST40_RS10905 2362519 .. 2362539 - -8.3 -3.01712 TCCTGTTCTCGAACA CGACCAG CCTGGTT CTGGTCG CCCTGACGGTCGCGG 56 297 ST40_RS10875 2356328 .. 2356341 - -3.7 -3.90112 GCCTCGTCAACGAAA CCGGC CTCG GCCCG ATGGGCTTCATGGTT 56 516 ST40_RS10840 2348779 .. 2348792 - -9.5 -3.16191 CCACAGGGTCATCAA CGGCG CCGA CGCCG CGCGCTTCCTGAGCT 61 352 ST40_RS10795 2337851 .. 2337878 - -14.9 -5.03314 TGTATTGGGAAAAAA TGGGGCGCAAG GCTTGG CTCGCGCCCCA GTCGGGCTTGACCTT 100 46 ST40_RS10790 NONE ST40_RS10785 NONE ST40_RS10780 NONE ST40_RS10775 2333429 .. 2333446 - -5.5 -2.73159 CCAAGCCCCGCAAAT CCGACCCG CAT CAGG-CGG CCTTGTCCGGCCGAA 47 18 ST40_RS10770 NONE ST40_RS10765 2331748 .. 2331761 - -4.5 -3.16564 CCTGCAGTGTATTAA CTGCA TTCG CGCAG ATCAGCGCAGTCACA 49 121 ST40_RS10760 2330531 .. 2330547 - -6.5 -3.36492 TCTGGAAGGGCACAA GCAGTTC GAC GAACAGC GGCTGGAAGCCGACG 56 425 urtA 2323995 .. 2324018 - -14.6 -3.37685 AAAACCGGGGAAAGA GGACGGGTCT CGTA AGACCCGCCC GAGCTCCGTCTCCTC 95 43 urtB NONE urtC NONE urtD NONE urtE 2319384 .. 2319396 - -5.5 -3.34398 CCCCTGGCCTAAACA GTCAG ATA CCGAC GGACTTCCGTTTCAG 53 6 ST40_RS10715 2317866 .. 2317887 - -6.5 -3.33696 CTCCGCCGGAAGGAA GGCCCCTGT GCGA AGAAGGGCC CCCTCATTTCGGTGC 58 53 ST40_RS10710 2316210 .. 2316243 - -11.7 -5.055 TTAATTTTTAAAAAA TTGAACGCCGGGCTA GGGT TAGCCCGACGTTCGC ATTGAATATTAAATT 100 61 ST40_RS10705 2315079 .. 2315093 - -4.2 -3.9777 TCCAACATCCACAAA CGGGAA AGC TTCCGG CACCATTCCTATGTT 60 179 ST40_RS10695 2314118 .. 2314132 - -7.8 -2.72511 CCGATCTCGGCAAAG GCACTG TAT CAGCGC GTTTCCAGCGTGATC 53 224 ST40_RS10685 2313229 .. 2313270 - -2.7 -3.76641 AGGTGAAGATTGAAA GGATCGGGTGCGTGGCACT CTTC AGTGCCCGGAAGCCGCGCC TTGCCTGAGCCTTGC 51 64 ST40_RS10635 2303001 .. 2303021 - -5.3 -2.93073 GCGGTCGAAGAAGCA CTGAACGGC GCA GGCGTTCTG ATGGCGCATCGCTCA 48 217 ST40_RS10625 NONE hemN 2297356 .. 2297376 - -12.5 -3.57462 TAGTCGACCTGGAAA GGGCTGCGA TTT TCGCGGCCC TTTTTGTTGTCGATC 85 107 ST40_RS10580 2288565 .. 2288583 - -8.2 -3.27771 TCGACAAGATCAAGA TCGACAAA TCC TTCGTCGA TGAAATCGGCGAACG 59 344 ST40_RS10565 2284034 .. 2284060 - -16.6 -5.67063 GTCAGGATAAAAAAA CAGCGTGTCCCT GCC AGGGGCACGCTG TGTCCGGCAAAGTTC 100 56 ST40_RS10550 2279099 .. 2279137 - -16.3 -3.55071 CTAGACCGGTTCAAA TGA-AAAAAGCCGGTGAC ACGG GTCACCGGCTTTCTGTCA GGGCTTTGTTTTCGA 100 23 ST40_RS10525 NONE pdeM 2271748 .. 2271777 - -4.4 -2.79133 GAATTCGTCAGCATA GCTC-TGGCTTAGCC AAC GGC-A-GCCATGAGC ACAAGCGGCAGATGA 45 45 ST40_RS10515 2270728 .. 2270742 - -6.4 -2.59564 CCGGCATGGGATAAT CAGCCA AGG TAGCTG GCGACAGATCCATTC 49 76 ST40_RS10510 2270363 .. 2270382 - -4.9 -4.40358 AGGCAGGCGAGAAAA GGCCGCC TGAAGT GACGACC TTGCCCGATCGCTAG 68 37 ST40_RS10485 2261940 .. 2261961 - -15.1 -5.38958 ACGCACAAACAAAAA CCGCCGGCG TTGC CGCCAGCGG TTTCAAAACTCTGAG 100 58 ST40_RS10480 NONE ST40_RS10475 NONE ST40_RS10470 NONE ST40_RS10465 NONE ST40_RS10460 NONE ST40_RS10455 2253732 .. 2253763 - -8.6 -2.54325 TGCGGTGAAAGACAG CCGCCGGACCAGCA CAAG TGTTGAACCGGCAG AAAAGGCGCACACAC 56 262 ST40_RS10450 2253145 .. 2253158 - -2.3 -3.97368 GCCTTAAGTGACAAA CGCAG GCCG CTGCT GGGACTAGCGGTTTC 54 30 ST40_RS10445 2251918 .. 2251929 - -5.8 -3.07443 TGACACTGCATCGAA CAGC CAAG GCTG TGATGGCTGAAGATT 49 89 ST40_RS10435 2249180 .. 2249205 - -5.4 -3.83026 GGCCGGCACAGGAAA CCGGAGGCTTG TCGGG CAAGCC-CCTG TTCCGGAAATCGACC 60 320 ST40_RS10420 NONE ST40_RS10415 NONE ST40_RS10410 2243991 .. 2244024 - -18.3 -3.87815 GTGCATGGCGATAAA GCTGATAAGGTGCCC AAGC GGGCACCTTATCAGG ATTGTCAGCAGGCGT 100 53 ST40_RS10405 2242961 .. 2242978 - -14.1 -4.74132 AGACTTCAGGAAAAA GCGGCGC ACCA GCGCCGC TTTTTTGTTATCAGC 100 69 ST40_RS10395 2240531 .. 2240550 - -4.2 -3.34398 CGTTGCTTTCAAATA CCTGCTCC GAGA GGATCAGA TGGTCCGGTGACGGG 51 21 ST40_RS10390 2239338 .. 2239351 - -8.1 -3.05384 CGTCTCCGCACTGAA GGACC TACA GGTCC CGGCAGCCCACAAGC 60 101 ST40_RS10385 2238900 .. 2238910 - -6.8 -2.53581 CACAGCCTGAATTGA GGCT ATC AGCC GATCAGATACTCAGT 51 28 ST40_RS10375 2237261 .. 2237295 - -9.3 -3.54935 TAAAGGGCCTGGAAA CGCTGCCG-CT-GCGCG TTG CGCGCCAGACGGAAACG GCGGGCAGGATTGCC 66 400 ST40_RS10365 NONE ST40_RS10360 2234524 .. 2234536 - -3.4 -3.53811 TCGACGCTCCCTAAA GTTC AGCCA GAAC CTCTTCCGGCCCTTC 49 8 ST40_RS10350 2232963 .. 2232991 - -8.9 -3.53224 GAGGCTTTTTCTAAA CTTACTCCTGTCC GTT GGAAAGGAGCAAA ACAGATGACCGATCA 68 276 ST40_RS10340 2232347 .. 2232366 - -2.1 -4.65263 ATTCCTGAAAACAAA CACGTGT ACTCTG ACACGCA CAGCGTCGGCTGAAT 65 55 ST40_RS10335 2231250 .. 2231263 - -8.1 -4.56597 TCCGTTCCTGAAAAA TCCGG ACCG CCGGA AGGCGGCGCGTGTCG 79 95 ST40_RS10325 2229602 .. 2229625 - -13.8 -4.81249 CGTGAAATTCAAAAA GCCCGGATCG GAAA CGGTCCGGGC TTTTTCCTTGCTGCC 100 93 ST40_RS10305 2225427 .. 2225445 - -13.8 -6.23545 CCCAAACAAAAAAAA GCCCGCCA AAT CGGCGGGC TTTCTGATGAATTGC 100 56 ST40_RS10255 2213993 .. 2214003 - -6.8 -3.36327 GGACCTGACCGACAA TGCG GAC CGCA TCCGTCTTGTCTTCA 56 256 ST40_RS10245 2212419 .. 2212431 - -3.3 -3.84304 GGAAGGCAGAAAACA CGCCT TTC AGCCG GTTTTCGCAATGGAT 54 190 ST40_RS10240 2212105 .. 2212139 - -4.9 -3.90922 AGCGTCTCGAAACAA CATGGCAAGCTGGCCG TCAC CAG-CGGCTTGCCGCG TCTTCGGACGCTATG 58 51 ST40_RS10235 2210583 .. 2210610 - -6.8 -3.27298 GTTTCGAACGAGGAA GCGGACGAGTAC TACC GCTCCCGGCCGC GCGGCAGCCGGATCG 56 329 ST40_RS10225 NONE ST40_RS10220 2208451 .. 2208483 - -19.9 -4.74706 TGGAAGATCGAAAAA CGTCGCCCCACCAGT GGC ACTGGCGGGGCGAGG TGACGGTCAACAGTT 100 55 ST40_RS10215 NONE ST40_RS10210 NONE ST40_RS10205 2206510 .. 2206524 - -7.1 -3.61239 GACACCCAGATACAA TGCCG ACTTG CGGCA AAAGCAATCCGGTCT 60 284 ST40_RS10180 NONE ST40_RS10175 2199741 .. 2199765 - -5.8 -3.49858 TCAAGGATATGAGAA GTTTGTCG-GA CTGA CCACGACAAAC TCCGGTTCAAACTGG 57 318 ST40_RS10165 NONE ST40_RS10160 NONE ST40_RS10155 2194219 .. 2194235 - -7.9 -3.21416 GACCCTGATCAGCAA GGTGGCC TGA GGCAACC TTCATTCCCGTCATC 59 113 ST40_RS10140 2188479 .. 2188490 - -3.6 -2.72096 GGCAGCAAGGATAAT GGGC CTCG ACCC GGTTGCAGCTGGGTC 43 59 ST40_RS10135 2186830 .. 2186851 - -3 -4.18197 ATTGGCCATCCAAAA TTATTGCC GCCACG GGCAATAG GGCACAGGATTACGC 58 50 ST40_RS10130 2183731 .. 2183779 - -20.3 -3.24161 GAAAGCTGGATAATA CGGCGTACCATCGCCGCAGGGGA GCG TCCGCTGCGGCGATTGTATTCCG GTCAGAGGCCTATGC 100 35 ST40_RS10110 2179957 .. 2179990 - -8.2 -2.5294 GACTGTTCAGAAGAT CTAGGGGCCGCCGGAT AGAC ATCCGGCGGC-CTT-G TCATTTAGCCGCGCA 56 30 ST40_RS10090 2174714 .. 2174736 - -11.9 -5.42259 GGAGGGTCAAAAAAA GGGGCCGGC TCTTT GCCGGCCCT TACCGAGGTGCGAGC 100 423 ST40_RS10085 NONE ST40_RS10080 2172799 .. 2172814 - -5.4 -3.32022 CGGCCGACACATCAA CGAGGCG ACG CGC-TCG CAATGCCGGCGACAT 53 195 ST40_RS10075 2171163 .. 2171191 - -2.4 -3.69216 TTTTTAGTGAAAATA CGCGCAATCACCC CATT GGGTGA-TGCAAA GCATTTGGAACTGGC 50 199 dxs 2168911 .. 2168930 - -11.4 -5.3689 AGAAATAAAACAAAA GCGCCGGA TTGA TCCGACGC GTCTGTTTCTTTCGA 100 152 ST40_RS10065 2167267 .. 2167279 - -7.7 -3.60475 AAGCCGCATTGCAAA GGCAA GGG TTGCC AGCGCCACCAGAGGG 62 180 ST40_RS10060 2166346 .. 2166385 - -6.3 -4.85782 CGCTTGAAAAAGAAA TTGCCGGGCGTTGTCTC TTCACC GAGACAGCGCCCGCTGA CGGGGCTTAGTTCTT 83 32 ST40_RS10055 NONE ST40_RS29685 2165488 .. 2165503 - -2.4 -2.8294 CAGCCTTCAGAAGCA GCCGGC GATT GCCGAG ATCAGGCGGTCGGCA 39 1 ST40_RS10050 2164720 .. 2164739 - -3.4 -3.889 TCGAAGGAGATGAAA GGCGACAG CACT CAGTCGGC TTTCTTTCCGTAGAG 54 17 ST40_RS10045 NONE ST40_RS10040 2162224 .. 2162248 - -8.7 -2.89803 CAAGAGAAGGAATGA GATTTTTCAGT AAT ACTGAAAGATC AGTCGCTTTTGATAA 62 24 ribB 2160837 .. 2160855 - -5.2 -3.72576 TTCGCCGCCATGAAA GGCCCCTT CCG AAGGATCC TCAGGTGTCGAGGAT 58 26 ST40_RS10030 2160244 .. 2160273 - -5.6 -4.15044 TCGTCTTCCAACAAA TTGC-GGCCCGGC TTGGT GCCGGGGCTGCGA TATCTCAGACAAACT 65 30 ST40_RS10015 2154930 .. 2154962 - -9.2 -3.85698 GGGCTGGCCGATAAA CTCGGCTATGATCCC TCGA GGGATGACAGCCG-G ATGAGACTGGCGGAC 73 508 ST40_RS10005 2152992 .. 2153008 - -10.9 -3.1978 ACTGGCAGAGGAAGA GCAGGAT CTG ATCCTGC AGCGCCGCGCCGACA 69 420 ST40_RS09990 2150013 .. 2150035 - -12.7 -5.45726 GACAGCGCAAAAAAA TGCCGGCGC TTTTG GCACCGGCA CTTCCTGTTTGTCGA 100 108 ST40_RS09985 2148210 .. 2148220 - -4.6 -4.12188 TTATGACCGGCAAAA CCAG AAC CCGG GCCTGGTTGCCGTTC 62 337 dnaA 2145935 .. 2145948 - -9.5 -4.85782 CGCGGCAAAAAGAAA GCCGC TGGC GCGGC TTCAAGGAGAGGGAG 100 199 ST40_RS09975 2144985 .. 2144997 - -3.3 -3.65224 ACCCTATCTGAAGAA GCACT TGA AGGGC GTCCCTACATGGTCG 51 300 ST40_RS09960 2142786 .. 2142819 - -12.5 -3.64703 CTCGGCGGACGGAAA GACGGCTGATTCTGC CCGG GCACAATAAGCCGTC AGGCCTTATGCGAAC 86 31 ST40_RS09955 NONE ST40_RS09950 2141796 .. 2141806 - -4 -3.92075 ACGGCCACCCACAAA TTTG ATT CAAA AGGTTAACCAACTCG 58 67 ST40_RS09945 2141338 .. 2141353 - -11.8 -4.87291 CACCTGAATCAAAAA GGCCGG GCGA CCGGCC TCTTCAGAATGCGTG 100 56 ST40_RS09935 NONE ST40_RS09930 2139055 .. 2139066 - -4.4 -3.75153 GTTGCCCAATCGAAA CTTG GCAA CAAG GCGGCAGCTCGTGCT 57 313 ST40_RS09920 NONE ST40_RS09915 2135214 .. 2135231 - -4.1 -2.74322 TGCAACCTTCCAAAT TCGTGTT GTTC AACGCGA TGTCCGCCCCGAACT 43 73 ST40_RS09910 NONE ST40_RS09905 NONE ST40_RS09900 NONE ST40_RS09895 2131154 .. 2131165 - -5.8 -3.66784 CCATGCTCAAGAGAA CTGC CCTT GCAG GGGGCTGATCATCTA 60 120 ST40_RS09890 NONE ST40_RS09885 2129458 .. 2129482 - -15 -4.24384 AGCACGAAAAGGAAA GGCCGGTCCC GATGA GGAACCGGCC TTTTGACTTGTTGTC 100 53 ST40_RS09870 2127518 .. 2127529 - -5.8 -3.67918 AAGGAACACGGGAAA CCAG TTGG CTGG CCGATGGCGTCGTCA 57 226 ST40_RS09855 NONE ST40_RS09850 2123944 .. 2123963 - -9.2 -3.00525 GCCGCTCAAACGAGA GGCACCGG CTCA CCGGTCCC GGATCTCCGCTCCGC 62 205 ST40_RS09795 2113364 .. 2113377 - -3.7 -3.17194 AGCGGGGGAATGCAA CGGGC CGCT GCCGG GTTTCCCGTATTGGT 47 89 ST40_RS09790 NONE ST40_RS09785 2110653 .. 2110676 - -3.7 -4.11744 AGGCACACAAAAACA CGTCGGATC GCTACG GAACCGGCG TCGAAGTTACGGACA 60 32 ST40_RS09760 NONE ST40_RS09755 NONE ST40_RS09750 NONE ST40_RS09745 2102004 .. 2102017 - -8.1 -3.16323 AAAACGCCGGACGAA CAGCG TGAA CGCTG TGTAAACAACGACGC 62 197 ST40_RS09740 2100629 .. 2100662 - -17.5 -2.92792 ACTGACGGGAAAGGA CGGGCCACAGGCATC TGAG GATGCCTATGGCGCG AGAAGGCCGAAGAAG 93 69 ST40_RS09705 2093365 .. 2093393 - -7.3 -3.28712 CTGCCCTCGGCACAA GTCCTGCTGCGGA CCG TCAGCAGCATGGC CGGGTTTTCGAATTC 59 50 ST40_RS09695 2091408 .. 2091418 - -8.2 -3.35046 CCATCCTTCGAAACA GCGC TGC GCGC ATGCTCAGATGAGGG 64 87 ST40_RS09675 2085845 .. 2085863 - -13.8 -5.38958 ACTGACAAACAAAAA GGCGGGCC TTG AGCCCGCC TTTTTCGTTCTTTGC 100 73 ST40_RS09665 2081338 .. 2081363 - -6.1 -4.07568 TGGTCTTTCCGAAAA TGACCTGG-CCG GCC CGGTCCAAGTCC CTGGCGGTCTTGTCG 65 404 ST40_RS09645 2077311 .. 2077343 - -11.9 -3.14344 GATCTTCTTGATCAA TCGAATGCGGGGCCA GGT TGGCCCCGTTTTCGT CAGGCAACATCCGGC 76 76 ST40_RS09635 2074344 .. 2074354 - -6.8 -4.57073 TACGGCCTTTAAAAA GGCA CAA TGCC TGTGTGAAAATCGGG 78 298 ST40_RS09610 2069505 .. 2069522 - -12.7 -5.66684 CAAGGCACAAAAAAA CCACGGG TTTC CCCGTGG CTTTCAATGTTTTCC 100 57 moaB 2059806 .. 2059830 - -4.4 -3.04144 GCCGGAGCTGGAAGA TCTCGATATCGC CAA GCGA-ATCG-GA CGTGGACGGATGGTG 46 232 ST40_RS09560 2057990 .. 2058011 - -4.3 -2.91032 ATAACAAGAACATTA TCACGACGC CAAC GCGACGCAA GATGCTGTTTACACC 46 91 ST40_RS09555 2056767 .. 2056779 - -3.3 -3.18681 GCTGAACGTCATGAA CTGCA CCC TGCCG TCCGGCAGCAAGTTT 45 55 ST40_RS09550 2055941 .. 2055958 - -9.8 -3.74526 TGACGAATTGAAGAA GCGGCC TTTCGG GGCCGC TTTTTTGTTGCGGCA 74 180 mutY 2046676 .. 2046686 - -3.2 -3.01712 GTGCGCTGTTCAACA TCCA AAC CGGA CAAACTGCAACTGTT 43 60 ST40_RS09500 2046098 .. 2046108 - -2.4 -3.66378 CAGATCTCACCGAAA GCGG GGA CCGT GGCTCCAGCAGGTCA 50 6 bfr 2045340 .. 2045361 - -15.9 -4.87893 AATTGCAATGAAAAA GCCGGTGCA GACC TGCACCGGC TTCAACATAACCAAT 100 58 ST40_RS09490 2043908 .. 2043943 - -5.4 -3.281 GGGCAATGGAGAAGA TGCGAGACATGACGGCA GAA CGCCTGCAT-TCCCGCA AGCTCCGCAGCTTTG 52 286 ST40_RS09480 2041394 .. 2041430 - -20.9 -4.55798 CAGTTCAAACGAAAA TGGCCGGCATCGGGGCC AAA AGCCCGGATACCGGCCA TGGAGTGGAAAGTCC 100 66 ST40_RS09475 2040449 .. 2040472 - -3 -2.70525 TTTCTTCAAAGGAAC GCATGCGGGTC TCC GTCTCGC-TGC AGACGCCGTTCCCCC 41 94 ST40_RS09470 2039689 .. 2039704 - -4.7 -3.53091 ACCGGGTTTGGTAAA TCAGC AGTTAA GCTGA TGGAACAAAAATTCC 52 87 ST40_RS09465 2038420 .. 2038446 - -11.6 -4.99645 ATTCCATAAAGAAAA CCCCGTCTCC TTTTCTG GGAAACGGGG CTAAGTCGATCTCGC 100 74 ST40_RS09445 2034476 .. 2034494 - -2.3 -3.21276 GGTTCCTCCACAAGA TCGGCGG TCAGG CAACCGA AGCTGCGACGGGCCG 43 162 ST40_RS09440 2032868 .. 2032897 - -20.1 -4.27584 AGCTTCAACGGAAAA CGGGGCAGCCTTC TTTC GAAGACTGCCCCG CATCACTGCCAGGAC 100 65 ST40_RS09425 2030930 .. 2030944 - -3.5 -3.06796 TTCCAGCGCAGCCAA GGCAC TGCTC ATGCC GCCAGGCCTTCTTCC 45 19 ST40_RS09420 2030549 .. 2030561 - -3.3 -3.09015 TGGATATTCACGTAA GGCAT GTC AGGCC ACTCCTTCGTTGCGT 43 19 ST40_RS09415 2030304 .. 2030326 - -15.6 -4.42464 AACGCGGCAAAGAAA GAAGCCGGGA TTG CCCCGGCTTC CATTTGACCGTTCAG 100 37 ST40_RS09410 2029092 .. 2029102 - -8.2 -3.61715 CATGGCCCGGAAGAA GCGC GCG GCGC CTTGCAGCAAGGCGA 64 327 ST40_RS09390 2025803 .. 2025845 - -5.2 -3.54424 GGCGAGTTGGGCAAA CTCGGCGCAGCCTTCGCCTG AAG CGGGCGCAGTCGGAGCCATG TCCGGCTGCGCTTGA 55 46 ST40_RS09375 2023641 .. 2023658 - -14.1 -4.3534 TTTCAAGGATGAAAA CCCCGGC TTCG GCCGGGG TTTTTTGTTTCCTGT 100 44 ispH NONE thrB NONE rnhA NONE ST40_RS09325 2013688 .. 2013708 - -11.2 -2.59079 AGGAAATGGAATGGA TTGCAGGG TCGAG CCCTGCAA TGACAAAGGGAGATG 68 89 ST40_RS09295 2005127 .. 2005145 - -2.3 -3.11341 AAGTTGAGGCAAAAG CGGTTCG ATAGA CAGACCG GCAGGCGGCAGGTTC 42 40 ST40_RS09290 2004491 .. 2004507 - -11.5 -5.14563 GGGGCGATCAAAAAA GGGCCCC CGC AGGGCCC TTCTTCAATTCTCTT 100 58 ST40_RS09245 1996467 .. 1996483 - -10.8 -5.63517 TTCGGAAACAAAAAA GGCGCC GAATG GGCGCC TTTCGTTTGTTTGCT 100 53 ST40_RS09235 1993472 .. 1993485 - -2.3 -3.85817 ATTTTCGGTGAGAAA GCCCA TGTC TCGGC TGAGTTTGGAGCCCG 54 261 ST40_RS09220 1990819 .. 1990833 - -3.5 -4.66318 ACGACGTGAAGAAAA CGCGGG AATT CCC-CG ATCACCATCAATATA 70 291 ST40_RS09185 1984483 .. 1984499 - -15.1 -5.26875 GCTCTAACGAAAAAA GCCCCGC TCA GCGGGGC TTTTTTTGAAAACTG 100 53 purD 1981836 .. 1981857 - -4.4 -3.55622 GCCAAGTCCCGGAAA CCGGAAAT GCCACG ATTGCCGG TTTTTCGCTTTGGCT 52 46 ST40_RS09170 1980631 .. 1980651 - -6.9 -3.44284 GGCTTATTAAGAATA GAATTCATC CGA GAGGAATTC TTCCAGTCTCAAGAT 58 223 ST40_RS09165 NONE ST40_RS09160 NONE ST40_RS09155 1975755 .. 1975793 - -11.1 -5.07652 GGTGCCAAAAGAAAA GGCAACCGGC-CTGC-GCT TGT AGCTGCAAAGGCGGTTGCC TGAGGTGGGGGCGGG 100 72 ST40_RS09150 1974409 .. 1974427 - -8.8 -3.02144 TCATTCGCCGGAACA TGGAGGCC CTG GGCCTCAA TGGCGCTGCCAAGAT 60 360 ST40_RS09135 1971906 .. 1971923 - -3.3 -3.16191 TGATACTCCGATGAA GTGCGGA AATA CCCCCAC GCACATTATGCCGTT 45 154 ST40_RS09130 1970653 .. 1970687 - -16.5 -3.55444 GTGTTACGCCTGAAA CAGAAAACCCCGGGC GACGT GCCCGGGGTTTTCCT TTGCCGGGGTTACGG 100 43 ST40_RS09115 1966709 .. 1966738 - -11.5 -3.17763 GGGACAGGCCACGAA GGCCTGGACGT GGAAAATT ACGTCCAGACC TATTTGCAGGGGCAT 69 90 ST40_RS09105 NONE ST40_RS09100 1961331 .. 1961351 - -16.9 -3.67026 AAAAACGATTTCAAA GGGCTCTCC ATC GGAGAGCCC TTTTTGGTTGTGAAC 100 179 ST40_RS09085 1959206 .. 1959225 - -10.6 -3.35706 AACGATACGTCACAA CGGTCCGG TGTG CCGGCCCG TCCTGCAGGAACACG 73 159 ST40_RS09080 1958053 .. 1958078 - -3.9 -4.56775 AGGGCCGGGCAAAAA TCT-CTGCGGTC GCT GGCCGCAGCAGG ATTGCCGATCCATAT 69 122 ST40_RS09075 1956961 .. 1956973 - -5.5 -3.24747 GCCGTACATCAGGAA CGAGA GCA CCTCG ACGGCGCGGTTGCCG 50 43 ileS NONE lspA 1951772 .. 1951794 - -3.3 -5.24531 ATTTCTCATAAAAAA CAGCCGGCAG CACT CCGCCCGC-G ATCAGTCGTTGTCCA 79 51 ST40_RS09055 1950934 .. 1950978 - -20 -5.4505 GTGGCCAACAAAAAA GACCTCCGGACCTATCCTCC ATATA GGAGGTGCGGTCCGGAGGTC CCGTTACAATTTTGT 100 81 ST40_RS09050 NONE ST40_RS09045 1947974 .. 1947995 - -14.4 -3.70102 AGGCAAAATCAAAGA CGCCCCGG TTTGAG CCGGGGCG TTTGTCATTGAGGCA 95 61 ST40_RS09035 1944922 .. 1944934 - -3.3 -3.05343 TGGATATGTCGAATA CCGGT CAG ACCTG AGAAATCAAAGGCCG 43 31 ST40_RS09030 1943114 .. 1943131 - -2.7 -2.73529 GCCGATATAAACCGA CTTGTCC GATT AAACAAG GCAATGTGTGCGGCG 41 129 ST40_RS09025 1942310 .. 1942336 - -8.9 -3.14132 GCCTCCCGTCACCAA TTAGCACTC-CT TAAC AGCGAGTGCTAA CAGCGCCATGGATTT 63 176 groES 1941906 .. 1941934 - -3.8 -3.60419 AGGTTGAAATCAGAA GCG-GTTCGCG GCTGGTTA CGCGATCACGC CCATGATGTCGGATT 51 12 groL 1940176 .. 1940195 - -15 -5.4505 GCGGCCAAGAAAAAA GGGCGGTC CGAA GACCGCCC TTTCTGTAAAGCTTG 100 56 ST40_RS09010 1938965 .. 1938984 - -3.4 -2.70932 GCCTTGGCTGAATTA CCTGTGGC CATA GCCAGTGG TCTTGCCGATCGGCC 41 134 ST40_RS09005 1938143 .. 1938155 - -4.7 -4.71828 ATTCTAGGAAGAAAA CCGTC GGA GGCGG CTAAGGTTCCGAAAA 74 83 ST40_RS09000 1937659 .. 1937671 - -6.2 -3.86202 CGGGACGAGACGAAA CGCC TGCTT GGCG TTCTGGACCGGCAGC 62 260 ST40_RS08990 1936623 .. 1936633 - -4.6 -4.66264 CAAAAGTTTTAAAAA GCGC ATG GCAC ACCCTTGCCGGATCT 71 164 ST40_RS08985 NONE ST40_RS08980 NONE ST40_RS08975 1933424 .. 1933441 - -4.7 -3.57792 TCACGCATCCCGAAA CGCGGCC CGAC AGCCGCT CCCGGATCCGTCACC 54 218 ST40_RS08965 1932170 .. 1932212 - -4.2 -4.38114 AAAACTCATAACAAA CCTCATCC-T-GGGGAAGCGC GTCA GCGCTGCCTCGAAGGATG-GG CGGTATACTGATGAG 68 166 ST40_RS08945 1930008 .. 1930032 - -6.3 -3.53811 TGCAGTTGGCGGAAA CCTTCGGCAAG CCG CTCGACGATGG CCGGTTGCTGATCCA 55 260 hisS NONE ST40_RS08915 NONE hisG 1921254 .. 1921270 - -4.3 -4.24002 GCCGAAACCGGAAAA CCGGCCT GAG AAGCTGG ACTTCGCCACGGCAA 65 389 ST40_RS08895 1918785 .. 1918797 - -4.8 -3.45571 TGTTGCAAAGATGAA TCCG GCGCA CGGA AATCAGGTAATCTTT 51 158 ST40_RS08890 1917839 .. 1917857 - -17.4 -5.06414 TGCCGGCAACAAAAA CGCGCGGC AGA GCCGCGCG TCTGTGTTCCGTTTG 100 61 clcA 1916164 .. 1916197 - -2.2 -4.28254 TGCCAATATCGAAAA GACCCGGCCGGACG TGATCG CGACCGGCAACATC GGCTGCATGACGCAA 60 204 ST40_RS08875 1914030 .. 1914069 - -10.6 -3.21593 GATGTTCTGACAAGA GGGCAAGGCCCGT-CCGCA AGG CGCGGCACGGGCCATGAAC CTTTACCAGGCTGCC 71 54 ST40_RS08855 1909751 .. 1909765 - -5.6 -3.05596 CAGGCCTTGATGCAA GTGACG GAC CGTCGC ATCCCGCATGCCAAG 50 83 ST40_RS08850 1909200 .. 1909239 - -24.4 -4.1413 AACAGATGCTGAAAA GCCAATTGGCCCGCCAGG GTTC CCCGGCGGGCCAATTGGT TGGTCTGGCTGCCAG 100 73 ST40_RS08835 1906196 .. 1906219 - -4.4 -3.53091 ATGCTCTCGCGCAAA CTGGCGCG-GG CAA CCACGCTCCTG CGCACGCGGGTCGAC 52 394 ST40_RS08825 NONE ST40_RS08820 1903016 .. 1903028 - -3.3 -3.53012 GCTTTTCCTCGCAAA GCCAC ATG ACGGC GAGTTTCCGGACGCG 49 88 ST40_RS08810 1900959 .. 1900970 - -7.2 -3.57263 AGTTCCATTTCGAAA CCGG CCTG CCGG AAGTGCGTAACTGGA 60 222 ST40_RS08800 1898956 .. 1898966 - -6.8 -2.98823 TTGCGCCCACACACA GGAC GTT GTCC GGTTGGCACTCGGAC 52 409 ST40_RS08785 1896715 .. 1896735 - -14 -5.75342 TTTTTGCAAAAAAAA GACCCGCC GGGGA GGCGGGTC AGGTTCGTCAGCAAG 100 85 xseA 1891511 .. 1891522 - -5.8 -3.29511 TCTACCCGTTCAGAA CAGG CTGC CCTG GCTGGTTGCCGGTCC 54 8 ST40_RS08760 1890718 .. 1890754 - -19.6 -4.72029 CCGAATTCAAGAAAA CAAAACGCCGCCGGAA GGTCT TTCCGGCGGCGTTTTT TGTTGCTGGCCGGGG 100 59 ST40_RS08730 1883036 .. 1883068 - -14.8 -5.40072 TTCCGGTCAAAAAAA GCCCGCGGACCGGA GTGTG TCAGGTTCGCGGGC TTCATGCATCGCAAA 100 70 ST40_RS08725 1880108 .. 1880130 - -9.1 -2.9296 CAAACGGCAATCAGA TGCGTTGCG GACTG CGCAACGCG TTCAGATCTGTTCCG 62 27 ST40_RS08715 1877627 .. 1877645 - -5.9 -3.25823 GCGTGCCGAGATCAA GGCACTC GTGGA GAGAGCC GCCGGTCTCCGCGAT 54 81 ST40_RS08710 1876830 .. 1876840 - -8.2 -2.87564 CCATCCTTCGAGACA GCGC TGC GCGC TTCCTCAGAATGAGG 59 361 ST40_RS08705 1875776 .. 1875800 - -3.5 -4.08064 AAGGCGGCTGCAAAA CGCGTGCTTCT TCG AGAAGGATACG GCGCGGCCGTGCAGG 60 59 ST40_RS08700 1874213 .. 1874241 - -8.1 -2.70932 TCGCGTCTCGAAGGA TGGGACCCTTGCT CGA AACAAGCGGCCCA TCCTTCGAGACGGAC 57 137 puuE 1872157 .. 1872184 - -8.4 -2.90392 GATGGGGCAATGAGA CGGCTCACGG CAGCAGGT CCTTGAGCCG GAACTGGGCAATCCG 59 2 ST40_RS08685 NONE ST40_RS08680 1870115 .. 1870132 - -14.1 -5.3236 AGAAGTCATAAAAAA GGGCCGC TCAC GCGGCCC TTTCTCATACTGGTA 100 51 ST40_RS08650 1862752 .. 1862762 - -6.8 -3.04144 CGTCGATCCGGAAGA CGTG CGC CACG ACATGCATGTCAACA 52 482 ST40_RS08635 1858899 .. 1858920 - -5.1 -2.62396 GAGTGTTCGACATCA GTTGGCCGAG TGG CT-GGCCACC GCTGCGCGGGCCTTT 46 1 ST40_RS08630 NONE ST40_RS08625 1856973 .. 1856995 - -16.3 -5.08824 CCTTGAGCGAAAAAA GCACGCCCG TTACC CGGGCGTGC TTTTTCATTTATAAG 100 54 ST40_RS08610 NONE ST40_RS08590 1850045 .. 1850058 - -2.3 -3.01712 CTGTTGGGCCTAAGA TTGCC ATCG GGCGA TTGTTTTACAATTCT 42 81 ST40_RS08585 1849245 .. 1849280 - -7.4 -2.92192 TTCCAGGGAAGTACA TGGAGATGGGGCGGGA ACAA TCCCGCCCCAATTCGG ATCAGGCTGCCAGGT 56 27 ST40_RS08580 1848500 .. 1848520 - -8.2 -2.88427 AACAGGGTCGATACA GCGGGCGA ACGTA TCGCCGGC AATGTGACAGAAGCC 55 366 ST40_RS08570 1847404 .. 1847434 - -14 -3.01712 CCGGTCTTGCCAACA CGTGGAACGAAGCC ATG GGCTTCGATCAACG ATTTCCGGCTACTCA 76 503 ST40_RS08535 1838064 .. 1838085 - -3 -3.35813 GTCGACTTCAACCAA GGCGCTCTCC TGTC GG-GAGC-CC GGCATTACTCCGAAA 47 30 ST40_RS08530 1837280 .. 1837292 - -3.4 -2.50074 CCGGTGAGAATACAG GAGT TTAAG ACTC GACTTTAGGTCTGAT 40 104 ST40_RS08525 1836017 .. 1836035 - -16 -4.66537 GCTCTCAACAGAAAA GCGCCGCA AAA TGCGGCGC CCGTCTTTTTTGTTG 100 49 ST40_RS08520 NONE ftsH 1831911 .. 1831930 - -2.1 -3.57992 AACGGAAGAACAACA CGTTTTC CTGGCT GAGAACG GCTGCACGACTGCGC 49 203 ST40_RS08495 1827615 .. 1827635 - -7.5 -4.21827 GGAAACATCGGAAAA CCGCTCAGA CAG CCTGATCGG GAAATGTTATCCCGC 74 32 ST40_RS08455 1818627 .. 1818648 - -8.9 -3.85698 CCCGGGTCGGAGAAA TCATTTTGT GATC ACAAAATGA CATGGCTTTCAAAAA 73 44 ST40_RS08450 NONE ST40_RS08445 1815620 .. 1815673 - -10.3 -3.80697 AGCAAATTAAGAGAA GCCGAACCGA-TGCCAAGATGACGCA TGT TTCATCGTCCCCGCAACCGGTTCGGC TGTCGGTGTCAGCCT 80 34 ST40_RS08440 1814470 .. 1814498 - -11.8 -2.64155 CCTGGCCGAAAGGGA GAGTTGCC-GGCC GTTA AGCCGGGCAACTC CGATCCGTGTGATCT 72 42 ST40_RS08435 NONE ST40_RS08430 1812630 .. 1812650 - -5.3 -4.17048 CTGTGTTGAAAACAA TTGCCTGGC AGT GCCAGGTGA TCAGAGGACGGCAGG 65 118 ST40_RS08425 1812078 .. 1812089 - -7.2 -3.37533 CGGTAAAACCACGAA GCGC ACCA GCGC CTGAACGGTCATCGG 61 155 ST40_RS08415 1810431 .. 1810446 - -8.2 -3.36289 TACCAGGCGAAGGAA CGCGGC CGGA ACCGCG TGGAGCATTGCGGAG 64 69 ST40_RS08375 1801062 .. 1801080 - -13.1 -4.28994 GACCAGTTACGAAAA GCCGGCG GTTTG CGCCGGC TTTTTTGTTTCCCGG 100 150 ST40_RS08360 1795618 .. 1795651 - -14.5 -3.53012 TTGCTCGGCCGGAAA TGCTCCGGCGCGACT ATTT AGCCGTGCCGGAGCC CGAATTGAAGGCGCG 95 44 ST40_RS08355 1794350 .. 1794370 - -11.8 -3.5525 AGACATTTGGTGAAA CAGCGGCG GCGAA CGCCGCCG TGAAGGCCGCCAAGG 74 451 ST40_RS08330 1787992 .. 1788025 - -16.7 -3.08032 GTTCTTGGAAAACCA GTGGCGCCGG-GCAGG AGA CCCGCACCGGCGCCAG ATTTTGGTCAGCGAT 100 40 choW NONE choV 1785834 .. 1785865 - -16 -3.67597 GCGCGGATTGAACAA CGAAAAACGGGACC TTCT GGTCCCGTTTTTTG TTTGTTTTTGAGGAT 100 234 ST40_RS08310 1784734 .. 1784769 - -12.7 -5.4505 TGTTCCAACAAAAAA CTCCCTGCAAGGA GGGGAGGAAA CCCTTGCAGGGAG TGGCCGGTGGCCTTT 100 78 ST40_RS08295 1781255 .. 1781265 - -4.6 -4.24745 CAGGAGCAACACAAA GGCC AAG GACC GATTGCGCGCAATGA 66 369 ST40_RS08240 1769435 .. 1769445 - -6.8 -3.64703 CCCGCGGGATCCAAA TGCC CGC GGCA GCCAGGTCTCGTTCC 60 242 ST40_RS08230 1766744 .. 1766769 - -16.9 -2.50821 CCTTGAAAGAGAGAG CCGGCGGCGCAG GTT CTG-GCCGCCGG AGATGTTCAGCTTAC 89 61 ST40_RS08225 1765837 .. 1765861 - -8.6 -3.57561 CGCGAAGGCCTGAAA CGGCTTGAGGCC CAG GGCCTC--GCCG TGCACGAGCCCAACC 64 481 ST40_RS08195 1759518 .. 1759546 - -5.2 -4.07885 GAGTTCTGGCCAAAA CGGCTCTCGTGT TCCTC ACACGAAGTCCG CGACGTCCTCCAGGC 65 12 ST40_RS08190 1758728 .. 1758750 - -7.6 -3.49475 TTCAGCGTCAGACAA CCTCGCCG AAAAACG CGGCGCGG TTTCAGGAAGCCTTC 62 376 ST40_RS08180 1756683 .. 1756702 - -12.8 -5.42259 GTAGTTGCAAAAAAA GGCCGGGA GTTA CCCCGGCC TTTTCCATTCATCCT 100 92 ST40_RS08175 1756382 .. 1756393 - -3.6 -4.25088 AAAAGAGAAATGAAA CCCG GCGT CAGG CCTTGGGCAAAATGC 64 21 ST40_RS08160 1753781 .. 1753815 - -5 -3.05844 TTCTCTATCGGAATA CGTAGTACCTCATCTG ATA CAGATAAGGTTTCACA GAGTACGTCAACGTA 50 46 rpmH NONE rnpA NONE yidC 1746038 .. 1746063 - -19.1 -3.33696 CGGCCTCTCAATGAA TAAGCCCCGCC GGTT GGCGGGGCTTA TCGTTTTCAGGCAAC 100 51 ST40_RS08120 1744573 .. 1744591 - -3 -2.76696 GGGTCGGTCAAGAAC CCCGTCGA AAG TGGACTGG ACAGGTGGTGCCGGT 41 55 ST40_RS08115 1743653 .. 1743671 - -14.6 -3.54424 CGGTATCGGTTGAAA GACGCGAG AGC CTCGCGTC AAGGTGCCGGATAAA 95 88 ST40_RS08110 NONE yihA NONE argB NONE ST40_RS08095 1740203 .. 1740229 - -11.5 -3.08813 CCTCAGCTGAAGATA CCGGCCGGTCCG CAAG CGG-CCGGCAGG TCTTCTATGCATCTG 72 111 ST40_RS08090 1739233 .. 1739247 - -2.9 -2.72511 TCGATCTCCGGAAAG TTGAA TATTC TTCAA TAATGAACCCCGGAG 41 57 ST40_RS08085 1738323 .. 1738341 - -2.4 -3.38812 CCTTTTTGAAGAAGA TGGCAA GCAGGTG TCGCCA ATTGCAGTGTTCAGA 45 36 ST40_RS08080 1737483 .. 1737496 - -2.3 -4.86621 ACCGGCAACCAAAAA GCTGT GCGA ACGGC TTGGCATCAAGCCGA 72 370 ST40_RS08060 1733932 .. 1733958 - -6.5 -4.7254 ATCTGCGATCAAAAA GGGTTAGCCGGC AGAC ACCGGCTG-CCC GGACTCACGATCTCC 81 272 ST40_RS08005 NONE dgoD 1721640 .. 1721650 - -5.4 -3.84406 CCTGGACGACAAGAA CGAT CTT ATCG CCGCCAATTTCGAAC 60 423 dapD 1717080 .. 1717100 - -11.1 -4.72272 GGGGCGCATGAAAAA CCCCGCC GGGTTAG GGCGGGG CTTTCCGGATTTCCA 100 76 ST40_RS07965 1712013 .. 1712041 - -14.6 -3.09823 CCTCCCAAAAGCATA TTGCCCGCCCGC CTCCC GCGGACAGGCAA TCTTAGGCACGGAAC 91 349 ST40_RS07960 1711077 .. 1711089 - -7.7 -3.73783 CATCGAACTCAAGAA GGACT GGC AGTCC CGCAAAGCCGTGTTG 67 96 rmuC 1706095 .. 1706113 - -8.9 -3.25102 ACCCGAGGTAGAACA GCAGCAA CAGAT TTGCTGC GTCACCCCTTCGGTG 65 27 ST40_RS07925 1705352 .. 1705362 - -8.2 -3.21099 GGGCGCGATCACGAA GGCG CGG CGCC TGCCAGAGTTGTAAG 62 133 ST40_RS07905 1701561 .. 1701586 - -6.1 -4.17089 GTCAAACGCGCAAAA GGAATGCCGAT GTTG AGCAGCACTCC TTTGGTCGTTTTCCG 67 133 ST40_RS07855 NONE ST40_RS07850 1690824 .. 1690834 - -3.2 -2.73635 GAAAGTGGCCGAAAT GACG AGG CATC TTAGTTCCAGGGTTC 41 26 ST40_RS07845 1690183 .. 1690197 - -2.8 -3.10012 AACGGGATCAGGTAA CGTG AAACAGA CACG TGCTGGCGCTGCAGT 43 71 ST40_RS07840 NONE ST40_RS07835 1687313 .. 1687325 - -6.2 -3.48593 TATCTGGCCATAGAA CCGG ACCTG CCGG GCGGTTTCGAGCCTG 55 148 ST40_RS07825 1685564 .. 1685578 - -7.8 -2.92789 AGAGTGAAGACTACA TCCGGC TTG GCCAGA GGCTCGCCAAGGTCG 55 218 ST40_RS07785 1676890 .. 1676902 - -7.7 -4.11216 CTCTCATCCCCAAAA CCTCA TCC TGAGG GGGACCGACAGGTCC 74 164 ST40_RS07720 1662219 .. 1662245 - -20.2 -5.13722 GGGAGCAAAAGAAAA TGCCGCGTCCCG GCC CGGAACGCGGCA GGCAATAAGGAGAAT 100 54 ST40_RS07715 NONE ST40_RS07710 1660500 .. 1660523 - -9.4 -2.68434 GGGCAGAGGACATGA CGGGCCCGGG TCAG CTCGCGCCCG ATGCGGCGCCTGCGG 59 12 hrpB 1657839 .. 1657863 - -7 -2.74514 GCAAAGCGGTAACTA GGGCCGGGGC TTCAT ACCCCCACCC CTAACCCCTCCCCAC 52 188 ST40_RS07695 NONE ST40_RS07690 NONE ST40_RS07685 NONE ST40_RS07680 1649728 .. 1649739 - -5.8 -3.42069 GGAAGCTGAAGAAGA GCGT CAGC ACGC ACAGGATCTGATGGA 55 515 ST40_RS07665 1648214 .. 1648263 - -4.5 -3.71607 TGAACATTAGGTAAA TCACGCATTTTTAGCTTCAGGTAA TAT TTAGCTGAAGA-AGAAATGCGTCA TTTTGAAAGTCAGGT 55 96 ST40_RS07660 1645656 .. 1645682 - -15.9 -5.09259 GAGCGCAAAAGAAAA GGGCGGG-GAGC CGAA GCTCACCCGCCC TCTTTGGTCAGATGT 100 47 ST40_RS07655 NONE ST40_RS07650 NONE ST40_RS07645 1642515 .. 1642525 - -5.4 -3.87815 CTCCACGGGCAGAAA CTTC GAT GAAG TCATCCGCGTGATCG 62 302 ST40_RS07635 NONE ST40_RS07630 1640889 .. 1640905 - -13.7 -5.52096 AAATCCAATAAAAAA GGGCGGT CGA ACCGCCC TTGTACCCGGTAATG 100 55 ST40_RS07625 1639453 .. 1639470 - -2.7 -2.64155 GTCCCTCCAAACGGA CACTCGTT CCC AACG-GCG ACACCGTAACAACTT 40 108 ST40_RS07620 NONE ST40_RS07615 NONE ST40_RS07610 1635808 .. 1635834 - -7.3 -2.63901 AGGCTATTAACCAAT GCAAGGCC-GTC TTCA GACCGGCATTGC CGGGCCAAATGCCTT 54 11 ST40_RS07605 1634971 .. 1634988 - -12.7 -4.21275 GTAAGGCATGGAAAA GGGGAGC TTCG GCTCCCC TTTTTAAGTCAGGTG 95 141 ST40_RS07595 1632816 .. 1632841 - -4.6 -3.8646 GAGCAAGAAGTTAAA CCGACTTCGC TAATCT GCGAAGACCG ACCGCAGTTTTCCTT 58 77 ST40_RS07590 1631445 .. 1631467 - -13.4 -3.2048 TGCAAATGCCATGAA GCCGGACACC GAA GGTGCCCAGC GATTTCGCTTGCCTG 87 126 mepA 1629933 .. 1629963 - -3.9 -3.28712 CCTGGCGCTTTATAA CCAGGCTGTGCG-CG AGA CGACGG-CTGCCTGG ACAAATCGTGAGGAA 47 472 lepA NONE ST40_RS07570 1626945 .. 1626981 - -5.8 -3.01924 GATCGCTTTTGAAGA CGCCTTCACCGGCACCG GTGT CGGTGCCA-TACAGGGG GCCGTCAGCGCAGGG 49 248 ST40_RS07560 1625700 .. 1625727 - -10.5 -4.61566 TTCCAAACCAGAAAA CGGCGCCTGGGC GGCAA GCTC-GGCGCCG TTTCTGTCTTTGGGA 95 113 ST40_RS07550 1624312 .. 1624335 - -5.2 -2.62184 CCCGCCGCGACAGCA CCGTCGGTCCG GAC CGG-CCAATGG GCACACGTGGTGCCG 43 109 pheS 1621880 .. 1621902 - -3.4 -2.64155 GCGCCCCCAAATTCA GGCGGT TAACTGGACAG ACCGCC GAACAGTGTCGGCAG 40 8 ST40_RS07535 NONE pheT 1618677 .. 1618702 - -14 -4.72272 GCCCGCCAGTAAAAA GGCCGCGCGA TGGTGT TCGCGCAGCC CCTTTTTCAAGTCTT 100 54 ST40_RS07510 1616324 .. 1616336 - -3.3 -4.05788 TTTCGTGAAACGAAA CGGCA GCT TGCAG ACGCCTGCGCTTCGT 59 293 ST40_RS07480 1610424 .. 1610439 - -4.8 -3.7553 TAAAAAAAATAGTAA TTTCAA AGTC TTGAAA AGAGAAATGGCGGAC 55 33 ST40_RS07475 NONE ST40_RS07470 1607093 .. 1607106 - -2.3 -2.62396 GACGGGGCTAGAGTA CGGTC ATTG GACTG CCTCGATTTCTGTCG 38 15 ST40_RS07465 1606013 .. 1606024 - -5.8 -3.31799 CAGAATCGCCCAGAA CCGA TGTG TCGG TATTTATGGAAGCTG 56 149 ST40_RS07455 NONE ST40_RS07450 NONE ST40_RS07445 NONE ST40_RS07440 1602018 .. 1602028 - -3.2 -3.59627 AGGAAACGCGCGAAA CTCA CTT CGAG CCTCTTCTTGTTATG 49 16 ST40_RS07435 1600514 .. 1600524 - -6.8 -2.52464 CTTTGGGCGAACGGA GGTC ACC GACC AGATCCAGGGAGAAC 48 405 ST40_RS07415 1595915 .. 1595945 - -8.3 -3.17723 GTATGGCGAACCCAA CACCCAGCCGCCGA CACT TCAGCGCCTGG-TG CTGGACACGGGAACG 57 471 ST40_RS07400 NONE ST40_RS07395 1590289 .. 1590310 - -2.2 -4.64657 GCAAACTGGCAAAAA CCGC-CAGG GCTGT CATGCGCGG TGAGGACATCTACCC 68 132 ST40_RS07380 1587486 .. 1587497 - -3 -3.76167 TGAGAACTGAAAACA TTAC AGAA GTAA ACGTTCAGCCTGTTG 52 309 ST40_RS07350 1580533 .. 1580552 - -2 -2.71712 TTGGGCTTGTGAAAC TGTCTGGG CGAC CCCACACT CTTAATGTGTTCAAC 39 340 ST40_RS07335 NONE ST40_RS07330 1575737 .. 1575765 - -21.1 -4.13995 TCCCCACAAACGAAA CGCCCGCAGAAGC AGG GCTTCTGCGGACG CTCTTGTGTCGGGCA 100 57 ST40_RS07300 NONE ST40_RS07295 1570017 .. 1570033 - -10.1 -4.18488 ATCCATTTCAAGAAA GCCAACG GCA CGCTGGC GCCCAAGGTGTTCAA 84 226 ST40_RS07260 NONE ST40_RS07255 1560833 .. 1560843 - -2.4 -4.4078 CCTGGCGAAGCAAAA GTGC AAA GCCC GGTCCCAACCGCCGG 62 300 ST40_RS07250 1557362 .. 1557374 - -9.1 -4.41047 ACCCCTCAATGAAAA TCCCG GCT CGGGA ACAGCCGCTTGGCCT 85 3 ST40_RS07245 NONE ST40_RS07240 1556263 .. 1556290 - -7.6 -3.14051 CCAGCGTCAGGAAGA TCACGCCCGAGGC CGT GCC-CGGGCTGGA AGTGGCAAGTCAGTC 57 215 ST40_RS07220 1552558 .. 1552568 - -6.8 -3.22068 GAAGACAGCTAGCAA CCAG GCG CTGG CGCTGCGGACACAAC 56 53 ST40_RS07215 NONE ST40_RS07210 1550416 .. 1550433 - -9.1 -3.15544 GGCTACCGGGACGAA GGCCGCA TCCT TGCAGCC TGGTGCGAGCTGCGC 61 196 ST40_RS07200 1549132 .. 1549143 - -7.2 -3.14683 ACATCTTTCCACCAA CGGC CCCA GCCG CGGTGCGGATGTCGC 54 188 ST40_RS07180 1545954 .. 1545972 - -5.3 -3.30651 GCCCATATCAGAAGA GCACGAA GGCGG TTCATGC CGTCGGGCAAGTCCG 52 43 ST40_RS07175 1545216 .. 1545236 - -11.1 -3.57185 TCGACGGAAAGAACA GCGGGCCCT TGA AGAACCCGC AAACAGCGTTGATTA 77 148 ST40_RS07165 1542510 .. 1542529 - -6.4 -3.09516 CCTGGTAGCACGCAA GC-TCGGCG AAA CACCGATGC TGATCGTCGCCTCGC 52 450 ST40_RS07155 NONE ST40_RS07150 NONE ST40_RS07140 NONE ST40_RS07135 1536284 .. 1536315 - -3.6 -3.99324 GCCGATCACCAGAAA GGCGCTGGCCTT TGCCAGTG AAGACCCGCGCA TTCCATTCGTCACCT 56 173 ST40_RS07115 NONE ST40_RS07110 1532997 .. 1533018 - -12.3 -2.91264 CGCGGGATGGAGAGA CGCAGCTCC TCAA GAAGCTGCG TCTCTCGGCAAAAGG 75 45 ST40_RS07105 1532497 .. 1532509 - -10.5 -2.65354 TGGATGTGAAACCGA CCCGG CGG CCGGG CGCGACCATTTTTTA 66 128 ST40_RS07085 NONE ST40_RS07080 NONE ST40_RS07075 NONE ST40_RS07070 1527138 .. 1527154 - -2.9 -2.7535 GCTGGCAACAGATCA CCGCG TGTGTGC CGCAG TACCTGAATGCCGGT 41 57 ST40_RS07065 1526342 .. 1526354 - -6.9 -3.67967 CAGACAGACAGACAA GCAGC CAC GCCGC GGAGTGGGAGATAAT 62 177 ST40_RS07060 1525418 .. 1525461 - -7.4 -2.50307 GAAACCGGGACGAAG CGATGGGCGCGGAGCCGAT GTTGGTG ACCAGA-CGGCGCCCATCG TCAATTTCAGCTCAT 53 49 ST40_RS07055 1524823 .. 1524863 - -4.5 -3.76224 CTGGTACGCAGCAAA CGGGCTGAATCCAGAGCTT GTG AAGCCCTTGCAACAGCCCT CCTGGAAAGGGAGGT 57 87 ST40_RS07045 1522569 .. 1522579 - -4.6 -4.56597 GGTGGCGCGGAAAAA CAGG TCA CCCG TGAATTCGACCATTG 70 418 ST40_RS07005 1514068 .. 1514099 - -14.4 -3.26779 CGGCTAAAAGATAGA CAGGCTTCGCGGTC AGCC GGCTGCGAAGCCTG TTTTGACGTCAGTTT 95 34 aroA NONE cmk 1504522 .. 1504544 - -11.2 -3.5511 CCGGATGCACAAACA GGGGCGCACC GGT GGTGAACCCC TTGTCCTTATCAGGC 77 35 rpsA 1502522 .. 1502553 - -19.6 -3.97368 CTCGCAACGCAGAAA CAAAAAGCCCGGCA TTGC TGCCGGGCTTTTCG CTTTCAACTCTCGTG 100 56 ST40_RS06945 1501635 .. 1501645 - -2.4 -3.85698 GCCTTTGCCGATAAA GGCG ACC CGGC AGCGGAAACGTCGGC 54 484 ST40_RS06935 1499154 .. 1499167 - -4.5 -4.2349 CGGCCAGACCGAAAA GTCCC TGAA GGAAC AGACGGGCGATCACG 65 215 ST40_RS06925 NONE ST40_RS06920 1496565 .. 1496576 - -7.2 -2.71924 CAGCTTTTCGGAAAC CGGC AACG GCCG TTCCAGACGCTCGGG 55 91 ST40_RS06915 NONE ST40_RS06910 1494363 .. 1494383 - -2.4 -2.92886 ACTCCACATAAGAAT GTGCCTGC CCGAC GCAGGCGA TTTGCCATCAGGCCT 40 33 ST40_RS06905 1493191 .. 1493216 - -8.3 -3.85817 AGTTTCGCGGACAAA TCATGGCTGAA ATGG TGCAGCCACGA CGCCGATCGTTTCAA 71 91 ST40_RS06900 1492505 .. 1492532 - -13.4 -5.00616 CGGTGCGTGAAAAAA GAAGCCCCGCAG CGAA CCGCGGGGCTTT TGTCTTTTCAGCGTT 100 111 ST40_RS06880 1488349 .. 1488359 - -5.4 -2.79321 CCGACATGAATACGA TGTC CCC GACA AGAGCTTATGAAAAC 47 153 sppA NONE ihfB NONE ST40_RS06865 NONE ST40_RS06860 1485326 .. 1485346 - -8.2 -4.61747 CCAAGAACGACAAAA GCCGGCCC ACGGG GAACCGGC TTCACGATTATCGTA 87 364 ST40_RS06780 1462358 .. 1462381 - -13.9 -5.1675 CTACCCACGAAAAAA CGGCTCCTC GAGGGG GAGGAGCCG TTCAGGTTTTGCGGG 100 56 ST40_RS06775 1461823 .. 1461833 - -5.4 -2.9462 TAGTCATCGAAATCA GATC CGG GATC AGGTGACGGGTTCGA 49 24 ST40_RS06770 NONE ST40_RS06765 1460480 .. 1460498 - -3 -2.57132 TTTCCGGCGGACAAG GGCCGAAT ATC ATGCGGCA GCTCCCGGAGCGGTC 40 16 ST40_RS06760 1458576 .. 1458587 - -4.4 -3.58726 GCGCGGGAGAGACAA GTCA GCCA TGAC GTTTTCCTTCGTTCT 52 314 ST40_RS06755 1458300 .. 1458317 - -14.1 -5.4505 CCGGGCAATAAAAAA CCCGGCC TGAG GGCCGGG TTTCGAGGTACGTGG 100 86 ST40_RS06750 1454478 .. 1454499 - -12.9 -2.75183 AGCTTCATTCAATGA CGCGGTCCG GCAA CGGGCCGCG TTTTTGTCTTTGGGG 76 133 fsa 1445841 .. 1445860 - -16.4 -5.64421 ACGGCAAACAAAAAA CGGCCCGG AAAT CCGGGCCG TTCGTTCGTCTTAAA 100 50 ST40_RS06710 1444204 .. 1444216 - -5.5 -3.61398 CGCTTGCCGGAAGAA CCGGA CTT TCCAG TCTACAAGGCGTTCT 57 471 ST40_RS06700 1443597 .. 1443609 - -3.3 -4.02315 AAGGAAAAAGCGAAA GGCGA TTG TCGTC GCACTGCCCCTGACC 56 43 ST40_RS06695 1443223 .. 1443243 - -12.5 -5.44119 TTCAGCCGAAAAAAA GCCCGCTGC GGA GCAGCGGGT CTTGGTCTGGAGCTT 100 56 ST40_RS06690 1441953 .. 1441978 - -5.3 -3.12999 CGATGCCATAGGCAA CGTC-GCCGTCA TGC TGGCGGCCGCCG GTGTCTGGGGAACGG 50 194 ST40_RS06680 1440839 .. 1440861 - -8.4 -3.18274 GTGATGGCAACGGAA CTCGGCTCAG GCA CCGAACCAAG ACCGATAGACGAAAG 62 146 ST40_RS06620 1424358 .. 1424371 - -2.3 -3.37464 TCAGGAAGTCCAGAA CGGTC GCAA GACAG CCCTTTACCTGCGCT 45 346 ST40_RS06600 1421802 .. 1421812 - -5.4 -2.90496 TCTTGGTGCAAATGA TCGT TGT ACGA ATTTCAGGATCGGAA 49 57 ST40_RS06595 1420740 .. 1420753 - -5.2 -3.38727 AAGAAGGGCAATGAA GGCG GAACCG CGCC TGTGGATGACGTACA 53 105 recQ 1418473 .. 1418487 - -3.5 -4.07568 CCTGTGCTTCGAAAA CCGAT TTGTT ACCGG CCTGTTCGGGTTCCT 59 326 ST40_RS06560 NONE ST40_RS06555 1412232 .. 1412252 - -13.9 -3.96705 GCCAGAAAATCGAAA GGCCGTCCC GGG GGGGCGGCC TTTTTTGTTGCGACA 100 256 ST40_RS06515 1404894 .. 1404905 - -5.8 -3.58329 GAAACACGCTGGAAA CCAG GCAC CTGG CACACCGCCGAAACC 57 48 ST40_RS06495 1401306 .. 1401328 - -3.4 -2.8372 CAGGGTTGAGGAAAT CAGGTAAC TACCGCG GTTTCCTG GTCAGGCGCTTGGCG 41 10 ST40_RS06475 1399819 .. 1399830 - -4.4 -2.78384 GTGCCGCCGATCACA TCTG AATG CAGA TTGAAACAGGTACGA 45 67 nudC NONE ST40_RS06465 1398116 .. 1398128 - -3.3 -2.86743 AAACGGCAGATCACA TCGGG CTC CCGGA TCACGACAGGTCGGG 42 78 ST40_RS06460 1396800 .. 1396810 - -8.2 -3.53343 AACTGTTTGTTGAAA CGGG CAT CCCG CGGCGCTTGGTCACG 65 115 ST40_RS06455 1395365 .. 1395388 - -11.8 -2.80443 GCACACGGCATCAGA CCTTTGGCTG GTCG CAACCAAAGG GGACATTGGGAATTC 72 91 ST40_RS06450 NONE ST40_RS06445 1393726 .. 1393756 - -7.6 -3.02461 CAAGGTGGTGGAACA GGGCGCCTCCGAA CAGATC TTC-GATGCGCCC CGGACTGATTACACC 56 197 ST40_RS06405 NONE ST40_RS06400 NONE ST40_RS06395 1380804 .. 1380823 - -16.4 -4.07568 TGCCGGTTCTGAAAA GGGCGGCC CGAA GGCCGCCC CTGAAAAGGTTCAGA 100 36 ST40_RS06380 1376028 .. 1376067 - -17.1 -2.73007 AAGACCTGGTGAAAT GACCGGTGGCGGCGGCA AATTTA CGCTGCCGTCACCGGTC TCACACGCGGTTAAA 91 36 ST40_RS06365 NONE ST40_RS06360 1372899 .. 1372909 - -4.6 -3.20435 GCAATCAGGGATCAA GCCG GAT CAGC CTGTCTTCAGAAGCT 49 4 ST40_RS06355 1371878 .. 1371898 - -8.3 -2.52464 GGGTCTTTCAAGCCA CTCATGACG TCA CCTCATGAG TGGGCTCAACCACGG 56 31 ST40_RS06350 1371008 .. 1371031 - -4.4 -3.14132 TCTTTCGTGCAGCAA GGCCGGCTCC GGCG GGAACCGGTT ACTGCGCGCGTTTTT 47 24 ST40_RS06345 NONE ST40_RS06340 1369864 .. 1369876 - -4.8 -4.08216 GCAGGTGTCGGAAAA CGGA CATTC TCCG AGGCATGGCAGCCGG 62 66 ST40_RS06300 NONE ST40_RS06295 1359077 .. 1359088 - -3.6 -2.87132 CCTGGCCTGCACACA GCGA CAGC CCGC TGACAAAGCAGGCAA 44 85 ST40_RS06290 NONE ST40_RS06285 NONE ST40_RS29675 1355870 .. 1355881 - -7.2 -4.254 GGAACAGTCAAGAAA CCGG GACA CCGG TGGCACCGGCCTCGG 71 168 ST40_RS06270 NONE ST40_RS06265 1350907 .. 1350926 - -15 -4.56775 AGGTTTGGGTAAAAA GGCCGCCA TCTC TGGCGGCC TCCGGGGCATGTTTA 100 38 ST40_RS06260 1349774 .. 1349784 - -2.4 -4.0251 ACGACTACAAGCAAA GCCG GTG CGGG GTTCATACGCAGGTT 57 326 ST40_RS06245 1347171 .. 1347182 - -2.2 -4.07885 CATGTCTCCGGAAAA TCCA TGTC CGGA AGACAACAGAACAGT 56 119 ST40_RS06240 NONE ST40_RS06235 1345540 .. 1345556 - -2.1 -4.07568 GGTCTGGCTGCAAAA GCGGCGT TTC ATGCCGA GTGCCCCTATTCGAC 56 32 ST40_RS06230 1343270 .. 1343283 - -8.1 -3.14344 GAGCGCTTTCAGCAA GGGTC ACAA GACCC GGGCCGGTGCCGAGG 57 347 ST40_RS06195 1334387 .. 1334406 - -15 -3.93664 ACGCAAGATATGAAA CGGGGACC GAAA GGTCCCCG TTTTTGTTTGTCTTG 100 57 ST40_RS06040 NONE ST40_RS06035 1300271 .. 1300286 - -4.8 -4.98531 CCTGTAAATCAAAAA TGTATA AATG TATACA TTTAGGAGGAAGCAT 80 514 ST40_RS06025 1299331 .. 1299343 - -4.7 -3.53012 GGTCCGGTCGGCAAA CTGCG TGA CGCTG GTGATGCGCTGTCGG 52 279 mutM NONE ST40_RS06005 1295032 .. 1295060 - -13.2 -5.15634 GACCCGATCAAAAAA CAA-CGGCGGCGG AAAA CCGCCACCGATTG GGCGCTGCTTATAAT 100 87 rpsT 1294634 .. 1294651 - -9.8 -5.75342 CGTGGCTAAAAAAAA CCCGGC ACTGTG GCCGGG TCTTTTTAACGGTCG 100 54 ST40_RS05995 1293521 .. 1293534 - -8.1 -2.66216 TTGCAGCATTATAAT GTCCC TTTT GGGAC GGTTATTTATATGGC 56 86 dnaA 1291819 .. 1291843 - -17.2 -3.66908 CGGCTCCAAAAGCAA GGGGGCGTTC TGCCC GAACGCCCCC AATTTTGGTAGAATA 100 147 dnaN 1290591 .. 1290601 - -2.4 -2.85351 GCCGGCTAGATCAGA CCCG CAT CGGC ATGAGAACGAACAGG 39 10 recF 1289403 .. 1289415 - -4.7 -3.05384 TTCCGGCGGATTTAA GGGGC CTC GCCTC GCTTCAGCAGGCGGC 47 9 gyrB 1286773 .. 1286789 - -15.1 -5.22039 CTGAAACGTAAAAAA GCGGCGC AGA GCGCCGC TTTTTTATTTGTTTG 100 49 ST40_RS05965 1283628 .. 1283649 - -13.7 -5.94713 ATGTTACAAAAAAAA CGCGCAGCC GTTA GACTGCGCG AATAAAGTTACTGTG 100 274 ST40_RS05955 1281539 .. 1281553 - -10 -3.64755 ACATACTGCGAACAA TGCTCG TTT CGAGCA ACTCGCAGACTTCTA 74 68 ST40_RS05950 1280559 .. 1280575 - -12.3 -3.81447 TACAGCGCATAACAA CCGTCTC GGC GAGACGG GCCGTTTGCGGTCTG 86 129 mobC NONE ST40_RS05940 1278327 .. 1278346 - -4.2 -4.30448 AAATGCAAGGCAAAA CG-TGGCTG GTG CTGCCAGCG TCATACGCAGGGACT 66 306 ST40_RS05935 NONE ST40_RS05930 1274356 .. 1274375 - -2.9 -3.57144 GCGTCGAGCGTGAAA CTTCGACA GTTCT TG-CGAAG GTGTTCGCGGCACTA 49 297 ST40_RS05890 1267383 .. 1267402 - -2.8 -3.60865 CATCGTAAACGAGAA CGAG-TTCG CTG CGAGGCTCG AGGATTGAATGCCAC 49 189 ST40_RS05880 NONE ST40_RS05875 NONE ST40_RS05870 1258276 .. 1258294 - -3 -2.71712 CTCCCTGTTTGAAAT CGTATGGC ATG GCCTTACT CCTTTGGCTTCTTTT 41 50 ST40_RS05865 NONE ST40_RS05860 1255821 .. 1255834 - -2.3 -3.09933 CGCCAATTCATTCAA CGTCA AGAT TGCCG ACGATTTTGGTGTCG 42 4 ST40_RS05855 1254294 .. 1254316 - -5.5 -2.82595 TCGAAGGACCGAAAG TCGAGCTGC GGTTG GCATCCCGA GAAATCTATCTCGCG 47 292 ST40_RS05850 NONE ST40_RS05845 1248848 .. 1248859 - -3 -3.73775 TGGACGTTTAGGAAA GTTT GTCG AAAC GTCTGTAGCTGGGAG 51 435 ST40_RS05820 1245964 .. 1245980 - -9.3 -3.15544 GCCGACCCGCATCAA GGACGCC AAC GGCGACC GCGCCCTGGAGTTCT 63 423 ST40_RS05805 1243304 .. 1243318 - -2.9 -3.21807 GGAGGAAAGTTAAGA TTTCA ATGAG TGAAA GCACGAATCTCCCTC 45 71 ST40_RS29670 1243030 .. 1243067 - -22.9 -3.53012 TTGCCTGCCTTGAAA TACAATCACCCCCGGAG GTCG CTCCGGGGGTGATTGAA ACTCTGCCGACTTTT 100 57 ST40_RS05780 1235520 .. 1235530 - -8.2 -2.67713 GCAGAAGAGAATGCA CGGG CAG CCCG GTTTTTAGGCCGGTA 56 48 ST40_RS05775 NONE ST40_RS05770 1233649 .. 1233659 - -2.4 -2.83012 AACCGCATCATGACA CCGG TTT CCCG CCGTTGACCTCAACC 39 7 ST40_RS05765 1232802 .. 1232813 - -2.2 -5.08824 GCCCGACCGAAAAAA CTGC CGCC ACAG CCATTCCGGGAAATC 78 122 ST40_RS05740 1227223 .. 1227234 - -7.2 -3.31792 GGACCAGGCGGAGAA GCCG GAAC CGGC TTGCCAGGAAGAGGG 61 84 ST40_RS05735 NONE ST40_RS05730 1225112 .. 1225133 - -2.9 -4.41348 CGGCGCGGAAACAAA CGCGCTGTT TGCA AACACCGGG GTCAATGGGCTTTCC 64 27 ST40_RS05725 NONE ST40_RS05720 NONE ST40_RS05715 1221889 .. 1221907 - -3.1 -2.91276 CGGCCTGCCAGAAAT CCTTTGA TGAAG TCATAGG TCGAAGGCCTCCAGA 42 19 ST40_RS05710 1220823 .. 1220835 - -9.1 -3.35046 GGACGTGCTCAAATA CCAGC CTT GCTGG AAATCGCGGTCATAG 63 105 ST40_RS05670 1211816 .. 1211831 - -2.5 -3.73068 GCTTGAATTGAACAA CGTCC GGCAGG GAACG GGATGGTGGATCTCG 50 481 ST40_RS05655 1211080 .. 1211092 - -4.7 -3.14132 CGTTCTCCCGAGTAA GGGCC GCA GGACC AGTCCGGGTTCGATC 47 52 ST40_RS05650 1210274 .. 1210284 - -5.4 -3.02043 AATGGCGGTGGAAGA TCAG GAT CTGA TCGGCGTAACGGCAT 49 81 ST40_RS05640 1206297 .. 1206312 - -3.3 -2.70932 CCCGGGCGTCAACGA GGAAA CACTGC TTTCC ATCGCTATCTCCGAC 41 377 ST40_RS05570 NONE tsaA NONE ST40_RS05560 1189358 .. 1189375 - -9.8 -3.13403 TTTTCCCCATCAACA CCGCGC GCAGCG GCGCGG CTTGCCGCCCTTGGT 67 40 ST40_RS05525 NONE ST40_RS05520 NONE ST40_RS05515 1179301 .. 1179326 - -2.6 -2.82856 AACGAACAGAAATAT TGAACGAG ATAAAAAGCA CCCGTTCA CCAATTTCGGTACAC 39 497 ST40_RS05475 1171863 .. 1171893 - -6.3 -4.38712 CCGACTGGTACAAAA CCGAAATCGAA CTGTTCGGC TTCGATTTCGA TACGCCGGCAACACG 71 100 ST40_RS05455 1167578 .. 1167596 - -17.4 -3.01984 GAACCGAACGAGAGA CGGGCGGC TTG GCCGCCCG CATCAAATGTCATGA 100 51 ST40_RS05450 1166202 .. 1166220 - -9.5 -4.13767 CGCGGCACCGGAAAA GGCGGAG ATCAG CCCCGCC AATCCATTGACCCTG 76 124 ST40_RS05440 1163415 .. 1163465 - -5.4 -4.24338 AAAAAGACTTCAAAA CGACCC-TCATCCTGAGGAGGACC GGTCA GGTCCGTCTC-GAAGGATGGGCCG CTTGTACCGGATTAT 69 212 ST40_RS05430 NONE ST40_RS05425 1159415 .. 1159436 - -3.7 -4.88293 AACGCGAAAAACAAA CTCGGTTAGG GTG CCTAACCC-G CTGGAATAACGGCAT 75 221 ST40_RS05420 NONE ST40_RS05415 NONE ST40_RS05410 1157512 .. 1157522 - -4.6 -2.78384 TTGGCCTCGATCAGA GGCC GTT GACC GGCACTTTCAGGAAG 45 10 ST40_RS05405 1155648 .. 1155671 - -18.2 -4.56597 CGGGGCTGGTAAAAA CTCGAGCCGG GAAA CCGGCTCGAG TTGCAGGTTGGTATG 100 63 sulP 1153652 .. 1153667 - -2.6 -4.8048 GCCTGACAGCAAAAA TGCCTCA TCC TGAGG-A GCGAACTTGTGAGCG 68 190 ST40_RS05390 1152255 .. 1152265 - -2.4 -3.79747 TGAGCGACGAGGAAA GGCC GCT GGTC CAAGGCGTCAACGAT 52 220 ST40_RS05380 1150131 .. 1150167 - -13 -3.64703 TTCGTCTGATGCAAA CTGCATCCGGGGCGCTG GTTG CAGCGCTCCGGATGG-G CTTCTAAGCTGATGT 86 78 ST40_RS05350 NONE ST40_RS05345 NONE ST40_RS05340 NONE ST40_RS05335 1138736 .. 1138759 - -15.4 -3.90291 AGGTCGGCAAGGAAA TGGAGCGGTT CTGA AACCGCTCCA GGCTGGCTGGGCTAG 100 37 ST40_RS05300 1131498 .. 1131516 - -6.6 -3.59979 TCTTCGGATCTTAAA CGGGCAGA TTG CCTTCCCG TTGCAATTCCTCCAC 60 2 ST40_RS05290 1129753 .. 1129770 - -9.9 -3.72576 GGCGCTGTGATGAAA TTTGCGC CATG GCGCAAA ATCCGGCCTGACAGC 74 181 ST40_RS05285 1128152 .. 1128164 - -4.8 -3.53012 TGGCTCTCCCTCAAA TCGG TGGCG CCGA GCGCGTCAGCTGCTG 52 71 preA 1126769 .. 1126795 - -13 -5.83226 AAGCGAACAAAAAAA CGCGGGCAAG GGAGGAT CCTGCCCGCG TTGAAGGTGACCGCC 100 51 ST40_RS05265 1121748 .. 1121762 - -7.8 -2.66435 AGGGTGACGAGATTA CCCGCA TGA TGCAGG TGACAGGCGAAGAAG 52 442 ST40_RS05225 NONE ST40_RS05220 1110713 .. 1110736 - -3 -3.27771 TCGACAAGATCAAGA TCGACCAGTC TTTC GTCCGCTCGA TGGCCTATTCGGACG 44 309 ST40_RS05200 NONE ST40_RS05195 NONE ST40_RS05190 NONE ST40_RS05185 1101179 .. 1101193 - -9.2 -2.72379 TGAAGTGGTTAAGGA CCGGCC TAG AGCCGG GATTCCGAGGTTTTG 60 16 ST40_RS05180 NONE ST40_RS05175 NONE mgrA NONE ST40_RS05165 NONE ST40_RS05160 1095198 .. 1095211 - -8.1 -3.31144 CCCTCATGCTGAGAA GGACC GTCA GGTCC GTCTCGAAGCATGGG 62 354 ST40_RS05150 NONE ST40_RS05145 NONE ST40_RS05140 NONE ugpC NONE ST40_RS05130 1088574 .. 1088593 - -5.1 -4.05446 CTTGGCAATTATAAA CTTGTTA AGCTAG TAACAAG TGAATTTCTCTGTAA 63 169 pobA NONE pcaD 1085227 .. 1085239 - -3.3 -2.91429 CAAAACGCTCAGACA TGGAG GTC CTCCT TCAGGAAAGTCATGA 42 6 pcaC NONE pcaH NONE pcaG 1083349 .. 1083360 - -7.2 -3.15544 CCTCATCCTGAGGAA GCGC TTGA GCGC TGTCTCGAAGGATGG 57 123 ST40_RS05090 1082427 .. 1082442 - -7.5 -3.67417 AGAGCCAAGTGGAAA GGCGG GTCAAG CCGCC TTCAGCGGCAGACCC 65 16 ST40_RS05085 1080877 .. 1080889 - -5.5 -3.63515 CGGCATCGTCAACAA GCCGA GGT TCGAC GTAGCCCAGCATCTG 57 201 xdhA 1078497 .. 1078509 - -2.6 -3.02385 AAACTCAAGCAGACA GCAG ATCGA CCGC TTCCGTGGTCGTTTC 42 2 xdhB NONE xdhC 1075224 .. 1075262 - -4.5 -3.05844 CCTTTCAGGGTAAGA CAGCCGTCCTGTTCCATC TCCC AAAGGA-CAGGGCAGCCG TTGTTTCACTGCGCG 47 31 ST40_RS05060 1073588 .. 1073598 - -3.2 -3.01712 GTTCGGGGCGGAAGA TCCG CCC CGAA GTGGTTTTAGGTCTG 43 43 guaD 1072178 .. 1072188 - -6.8 -2.79796 TCTCAGGTCAGGACA GGAC GAG GTCC CTTTCTCGGGCAGCA 52 7 maiA 1071213 .. 1071250 - -5.3 -3.695 CGGAAACAGTGCAAA CGCACCCGGCCAGAGCA GCGA TTCACCGGGCAGGAGCG GCAGCACACCGGGAG 57 92 ST40_RS05040 NONE ST40_RS05000 1059140 .. 1059150 - -6.8 -5.20606 AAATATGAAGAAAAA CCTC AAT GAGG CCTGAAGGGGACACC 91 17 ST40_RS04995 NONE ST40_RS04990 NONE ST40_RS04985 NONE ST40_RS04980 1054575 .. 1054618 - -4.5 -3.11569 GCATTCAGGCAAAAT CCGTTTGGATCGAGACCCGGC AAGA GCCGGGTCCCG-TC-ATGCGT CTGGTTATTTGAACT 47 30 ST40_RS04975 NONE ST40_RS04970 NONE ST40_RS04965 1050657 .. 1050692 - -5.4 -3.91084 GCACGGCCAATGAAA TGGATCTGCCGCAGCTC AGC GGGCCGTGG-AAATCCA TGGTGTCGCTGAACG 62 257 ST40_RS04935 1044653 .. 1044664 - -5.8 -4.08706 CGGCGAGCAGAGAAA GGTC CTCG GACC GGGAGATGCCTACCT 65 136 ST40_RS04925 1042662 .. 1042699 - -12.9 -4.79053 AAATACCAAAACAAA CAAATAACCCCGGT-AGA TAT CCTGACCGGGGTTTTTTG CCATTATGAAGGGGG 100 61 ST40_RS04860 NONE ST40_RS04850 1027747 .. 1027761 - -4.2 -3.66908 CGTTGGCAAAAGGAA CTGAAG GAC CTGCAG CGGTAGAGTTTACCC 55 143 ST40_RS04840 1026431 .. 1026472 - -7.9 -4.07568 CTTGGTGCCCGAAAA GCAATTGGCCCCGGTCGTCC GAT GGATGGCCGGGGC-ATTTTC ATGATCCGGAAGCCT 74 62 ST40_RS04820 1022704 .. 1022723 - -15 -2.71731 GTCACTGGCCAATCA GGCCCGGT ACAT ACCGGGCC GGGCTATTGCCTGCC 83 47 ST40_RS04810 NONE argE NONE ST40_RS04800 1017314 .. 1017343 - -12.8 -4.2828 CTTTAGTCATGAAAA TACGCCCCCGGC GGAGTT GCCGGGAGCGTC ATTTGCTGTGCTTCA 100 44 ST40_RS04795 1016293 .. 1016327 - -4.9 -2.67803 TGGTGACGAAAGGCA TG-GCGTCGGTCTCCC TTAT GGCCGACCGACCCGCA GACGCGGATCGATGA 44 6 ST40_RS04790 NONE ST40_RS04785 1013296 .. 1013317 - -15.9 -2.55351 GTGTGGTATATTAAT GGGAGAGCC GAAA GGCTCTCCC TTTTACGTTTGGGTG 85 295 ST40_RS04780 1011332 .. 1011347 - -3.2 -4.18161 CACAAAGTGTCAAAA GCCGAT AAAC ACCAGC TCCATGAGGCTGTAA 58 87 ST40_RS04775 1009265 .. 1009284 - -5 -2.70932 TGCCCTCTTGAAGCA TGACGTTT ACGT AATCGTCA AGTGGAAATCTGTGT 47 235 ST40_RS04770 1008881 .. 1008901 - -11.8 -5.7946 CGTGGAACAAAAAAA GCCGGCCC TGTTG GGACCGGC TTGAAAAGGTCTGCT 100 53 ST40_RS04720 997765 .. 997777 - -2.6 -2.93783 AAAACGCCCAAACGA CCCG ATTTG CGAG CGCGAATATATTTTC 40 55 ST40_RS04715 997183 .. 997218 - -13.4 -3.27489 GCAAGCTGAAACAGA CCCCGGAGGC-GCTTCT GGA AGAAGCCACCTCCGAAG GCTTGCTCAGGCTTT 87 46 ST40_RS04705 NONE ST40_RS04700 NONE ST40_RS04695 994815 .. 994839 - -10.1 -3.55548 GAACAGGTGGCGAAA GTTGAAGGC GGAAGAA GCCTTCAAC TCTGCAAGTCTGGCG 70 235 ST40_RS04680 991226 .. 991262 - -16.5 -3.07013 TACCGGCTGAACACA CGCGCCCGGAAGGCGGA TGA TCCGTCTTCCGGGCTGG GTATCTCGCGGTAAC 100 61 ST40_RS04670 NONE ST40_RS04665 NONE ST40_RS04660 987406 .. 987443 - -22.9 -4.63486 ACGGCGTGAAGAAAA TC-GGGCGTCCCGTGACC ACA GATCACGGGACGCCCTGA ATAACCGGCACATGC 100 124 ST40_RS04650 985617 .. 985631 - -5.6 -3.71991 CAGAAACTGGAAGAA GCGGGT ATC ATCCGC CGGTACCGGGCGGCA 60 342 hppD 984185 .. 984210 - -14.7 -4.67048 GCAGGGCAAAACAAA GGCCGCTTTCC CGAA GGACAGCGGCC TTTCAGAAGCAACCT 100 51 ST40_RS04615 979227 .. 979237 - -6.8 -3.54771 CGGATAAGATCAGAA TCCG GTG CGGA AATCCCGTGGTGCCG 60 9 coaBC 977511 .. 977547 - -12.9 -3.51032 ACCGCTCAAGGATAA GGGCGTGTTGCTGGCAG GGT CCGGCAGCACCACGCAC AACCTGCGTGAATTC 79 436 dut NONE ST40_RS04585 974451 .. 974465 - -3.4 -3.41878 TTCGGCAAGTTATAA GGGGCC GAA AGCACC TTTGCGATCCTGCGG 47 65 cysK 973348 .. 973379 - -22.3 -4.87807 GCAAGACATGAAAAA CCCCGCCGGCCGG AGTGAA CCGGCCGACGGGG TGAAATTTCGCGACT 100 47 ST40_RS04505 953685 .. 953705 - -7.6 -3.34029 GAAATACTGGTAGAA CGGGCCTGA GTCT TCAGGCC-G TCAGACCACCCGCAA 61 26 ST40_RS04495 951651 .. 951667 - -5.8 -4.15565 GTCAGCAGCTCAAAA TCCCAG GGTTT CCGGGA GTCCACATCAGGTCC 67 165 ST40_RS04490 950218 .. 950276 - -11.3 -5.09426 TTTAACCTGAAAAAA TCCTGCATCGCTTTTTGC-GT-TGAAATC TCT GATTTCAGACTGCGAAAAGCGATGCCGAT AAAATGGGATTTGCT 100 74 ST40_RS04470 944429 .. 944451 - -9.1 -5.07652 CTCCTGAAAAGAAAA GCGGCGCGGC CAGA ACCGCGCC-C TTTAGCAGTGGGACA 100 90 ST40_RS04465 NONE ST40_RS04460 NONE ST40_RS04455 942287 .. 942303 - -2.1 -3.615 AGCGGTACAGAAACA GCAATGC ACC GCTATGC CATGGTTTGAACCTG 47 57 ST40_RS04450 NONE murJ 937711 .. 937722 - -7.2 -3.61268 CATGCAAGCTGGAAA CGGC GTGC GCCG GCGTTTCGCGGTCAG 62 37 trpS 936484 .. 936503 - -15 -5.65927 TACCCAAACAAAAAA CCCGGCAG AAAC CTGCCGGG CTTTCAGGATCAGGT 100 56 ST40_RS04430 935048 .. 935060 - -3.3 -3.30851 ACAAAAAAAGTAAAT CGGGA ATT TCGCG CCGCGTTCATATCCA 45 32 ST40_RS04425 932533 .. 932555 - -4.7 -2.82327 TCGCGACAGGGAAAG TTCGCCGCG TCAGG CGCGGCTGA TTTCGGCCAATGCGT 45 12 ST40_RS04420 931186 .. 931199 - -5.2 -3.84887 ACAAAAGGCAGCAAA CCCG CAGCAT CGGG AACCGATAGCCGCTC 61 140 ST40_RS04415 928613 .. 928625 - -7.7 -3.19889 GATCAACATAGTGAA CCTCA TCC TGAGG AAGGCTGAAAGCCTG 59 140 ST40_RS04400 NONE ST40_RS04395 925572 .. 925599 - -14.8 -3.23853 CTGGCTGAAGGAACA GGCCCGGGCGGA CCTC TCCGCCCGCACC ACACTCCACGCCGCA 82 324 hrcA 917799 .. 917809 - -8.2 -2.73124 GCCTACTCGGGAAAT CCGG TCT CCGG CAGGTTTATCCGAGT 57 31 ST40_RS04350 916802 .. 916825 - -15.2 -3.49951 CACAGTTTTACAGAA CCCGTCCCGG GCAA CCGGGGCGGG TTTTTGTTTGCCCGA 95 115 ST40_RS04340 NONE ST40_RS04335 913998 .. 914016 - -4.4 -3.33737 CATCAAGCCGCATAA GCGATCTC CGT GGGAGCGC AGGTTAGCACCGTTT 51 105 ST40_RS04330 912085 .. 912102 - -2.7 -4.56607 CTACCAAGTATAAAA CCTGT CGTTTTTT ACAGG AGCGTCTGAAATCTA 67 38 ST40_RS04325 910189 .. 910236 - -20.2 -2.72661 TACCACTTGGAAGCA GACACGAAAAAGCCCGCAGTC TTTGAGG GACTGCGGGCTTTTT-GCGTC TGGTGTCCGGACCTT 100 39 ST40_RS04315 908880 .. 908915 - -8.2 -2.88663 ATGCATCGGCAGACA TGCGCT-GGAGAAGGTC AGT GTCCGTCTCCCAGCGCT TTCCGCACGTGGTGT 59 135 ST40_RS04310 907914 .. 907943 - -7.7 -3.63922 ACCTGCGCGAAAACA TCCTGCCGACGCG GCCT CGCGCCGACCTGA TCCTGACCAAGGATT 64 103 ST40_RS04265 901969 .. 901979 - -2.4 -2.80988 GCATAGCACCAAGGA TCGC CCA GCGC CAGAACTACCCAGAA 39 41 pyrF 900987 .. 901001 - -11.4 -3.15544 GCCTATTTCGATGAA GACGGC TTC GCCGTC GCCCAGACCTATTTC 72 152 ST40_RS04240 897708 .. 897731 - -4.4 -4.19177 ATGGCTGAACAGAAA CCGGGACTGG CGTT CCTACCCCAG AACATCCTTGAATTC 62 17 ST40_RS04235 896154 .. 896172 - -3.1 -3.48063 CATGGAAACCTACAA CAGC-ACG GTTT CGCCGCTG GGGGACATCAAGCTG 49 497 ST40_RS04205 890541 .. 890562 - -5.7 -4.11484 CGGAACCCTGGAAAA CCGCGTATC GAAA GGTGCGCGG TTTTTCTTTTGGCAG 67 486 mutS 882624 .. 882645 - -3 -3.93237 TGAAATAAGCAAGAA TTACAACC TAACTG GGTTGTAT CGCCCCGTCACCGCT 56 156 ST40_RS04170 880907 .. 880917 - -4.6 -3.73122 GAGAACAATCCGAAA CCCC TGC GGGA TGGCGAATTGCCGGA 57 512 nth NONE ST40_RS04155 879472 .. 879485 - -3.1 -3.85698 CGCGTTCGCGAGAAA CGCTGA TCG TC-GCG ATTGATTGCGGCGGC 54 43 fabA 878058 .. 878087 - -10.7 -3.80142 TACATAATATGCAAA CCGGCGCTCCC AATGAAAA AGAAGCGCCGG TGCCATCAATTGATC 80 54 fabB 876765 .. 876776 - -7.2 -3.55444 TCCTCAGCCGTGAAA GCGC GACA GCGC GAGCGACGCGTTGGT 62 2 fabI 875884 .. 875900 - -15.1 -5.4505 TTCTGGAACAAAAAA GGCGGCC AAC GGCCGCC TTTTGCATGTTTGGA 100 55 ST40_RS04125 874019 .. 874034 - -4.6 -2.76322 TCAGCCAAGACATGA GACTCG CAAA CGGGTC AAAGCATCGATGGCA 45 24 ST40_RS04120 873031 .. 873045 - -10 -2.61681 CTTGAAGCCCACAAG GCCTTC ATC GAAGGC ATGGGCGACAGTGCG 60 98 hemE NONE hemJ 867241 .. 867266 - -8.9 -4.24002 TTCGAAAGGTGAAAA TGACGGCCGCA TGTC TGCGGCTGTCT CTATTGCCTGTTTCG 84 47 rho 865666 .. 865700 - -9.3 -5.08088 AATTCTTAACAAAAA GTAAAGGCGCGAACCC TCGC GGGT-CGCGCCTTTGA ATAGAACCCGATCCG 100 48 ST40_RS04075 865010 .. 865028 - -2.2 -3.18023 CCATCAGGATGAACA CCCGCTCA GGT CGTCCGGG TCATCCAGTCAGACT 43 12 ST40_RS04070 864225 .. 864235 - -3.2 -3.90318 GCAGGATGTGAGAAA GAAG CAC CCTC CTCAGGTGACTTTTC 54 166 mnmE 862039 .. 862058 - -6.4 -3.73224 CTACCGCTCACGAAA CCCGACAGC AGA GCC-TCGGG TCCGGGTTTTTCCGG 60 284 mnmG NONE rsmG NONE ST40_RS04050 858563 .. 858593 - -7.6 -3.00923 TTTCAATAGGATATA GCATGGCGAC TGTGCCTCTTC GCCGCCATGC ATCAAGGCTCGCCAA 57 64 ST40_RS04045 857570 .. 857592 - -15.6 -5.85244 AATCAAAACAAAAAA GCCGGAGCAA TAA TCGCTCCGGC TCTAAAATCTAAAAT 100 53 ST40_RS04020 851028 .. 851055 - -5.4 -4.1347 CCGGAACGAGACAAA CACTGCGGGCCG ATCG CGACCGGCAAAG GGCAGCTCTTTGAAA 65 294 ST40_RS04015 850584 .. 850613 - -10.7 -4.4267 CTTCAAAACGGAAAA CCACCGCCGGC GTGACCTT ACCGACGGTGG TCTTGTTCGGGCAAT 93 88 dctP 847753 .. 847772 - -7.8 -4.07687 ACCCGGTCGCGAAAA GACACCGG AACT CCGGCATC CGTGACTGGAAGCGG 74 86 ST40_RS04000 847174 .. 847194 - -3.4 -2.57067 TGAACAGCGAAGCGA GAATGA-GA ACCG TCGTCATTC CATCACCACCGCTTC 40 20 ST40_RS03995 NONE ST40_RS03990 844960 .. 844985 - -3.9 -4.16842 TCCATCTGCAATAAA TCCAACGCCGAG TAG CACGG-GTTGGC GTATTTTGCAGTTCT 60 75 ST40_RS03985 844022 .. 844068 - -8.6 -3.55801 ATCAATCCGCGCAAA GCAGTTTGACACCCGAGGGCGC AAC GCGCTGTCGGATGTTAACCTCC GGGAACTCTTTACAC 65 243 ffh NONE ST40_RS03975 NONE rpsP NONE rimM 841022 .. 841036 - -5.6 -3.1085 TCAACCTACGCAAGA TGGGCT TGC AGCCCG TGCCGACGCGTTACC 50 36 trmD 839472 .. 839525 - -2.5 -2.70932 TTCCCTTTTGAATTA CAAAG-CGGTCAGAGCGTTTTCCGG TTTTGG CCGGAAA-CGGGTTCACCGACTTTG GGCCATGTTGCTTGT 39 173 rplS 838934 .. 838952 - -13.8 -5.22039 CGCAAATGCAAAAAA GGCGGCCC GAA GGACCGCC TTTTCGAAACGTTTT 100 52 leuC 837217 .. 837234 - -14.1 -4.93365 GGGGAGAAGCAAAAA GGGCGCC TTGC GGCGCCC TTTCTCACGAACCGA 100 53 ST40_RS03940 836195 .. 836211 - -5.1 -3.9279 ATTCAACGGCATAAA TACATCC ACT GGATGTC AACTGCCAGTTGCCT 63 135 ST40_RS03935 834570 .. 834583 - -2.4 -3.20109 TAGAAAAGTACCTAA TTCC TTAAAC GGAA TGTAGAAAATAGGGG 43 115 ST40_RS03930 833039 .. 833058 - -15 -4.42851 CTAAGAAACGCAAAA GGCTCGCC GGGT GGCGAGCC TTTTTTCAGTTTTGT 100 65 ST40_RS03915 828254 .. 828277 - -14.6 -3.15999 TCCGGACAGAGCGAA GCCCGCAACT TTTC AGCTGCGGGC TCCGATTTTCGTTGA 91 53 ST40_RS03855 819042 .. 819058 - -9.5 -4.88918 GTAGCGTAAATAAAA GGTTAAC TCC GTTAACC GCAACGCTACATCAT 100 69 ST40_RS03850 818482 .. 818510 - -8.1 -3.96932 ACACATAGGCAGAAA GGCGGG-TCAGC GCAAAT GCTGGTCCCGCC ACGTCGGCTTGTTCA 74 69 ST40_RS03845 816796 .. 816814 - -11 -3.04144 TCTTCAGCCCGAAGA TCCAGGCC GCC AGCCTGGA CCATGCCATGTGGTT 68 403 ST40_RS03835 NONE ST40_RS03830 NONE ST40_RS03825 NONE ST40_RS03820 NONE ST40_RS03815 812037 .. 812057 - -3.9 -3.89614 CCGAAGCTGGAGAAA CCCCTCG AGTGGAG CGAGCGG CACAATTACGCCTCT 56 211 ST40_RS03800 810371 .. 810382 - -2.2 -2.81966 TCAAATGTCATCACA TACC CCCT GGCA TGCTGCGCAGCCTGA 39 9 ST40_RS03795 809606 .. 809634 - -4.5 -5.05153 ACCGCAAAAAAGAAA CCGCGCG-CACC TGTTAC GGCAACACGCGG CGACTTCTCTGTTTT 80 59 ST40_RS03790 NONE ST40_RS03785 807579 .. 807616 - -18.5 -3.36273 TGCGCCGAACAGCAA GAACCCCGGAGCGAAAA CTGT TATTCGCCCCGGGGTCC GTGATCAATTTGCCG 100 47 ST40_RS03780 NONE ST40_RS03775 NONE ST40_RS03770 804771 .. 804801 - -21.2 -4.45544 GCGGAGCAACGAAAA CGGCCCGTGCGG GGCAAAT CCGCACGGGCCG TTAACAAAACTGCAA 100 51 ST40_RS03765 804269 .. 804284 - -2.5 -2.62735 AGATGCGTCACATCA GGCCA GGATGT TGACC TGTAATCCGACACCA 38 7 ST40_RS03760 803826 .. 803861 - -17.6 -3.47218 TTATTAAAAACGCAA TGGCGGC-CCCGGACGC CTG ACGTCCGGCTGCCGCCA GAAATATCAAGATCA 100 81 argH 801691 .. 801720 - -7.7 -2.78384 TCTCCTCGCATGACA CGGCGCGTTC-GGC AAG ACCAGTTCGCGCCG TGTGTTGCGGGGAAA 55 60 ST40_RS03745 801239 .. 801272 - -2.2 -2.55392 AAGTGATGCAAGGGA CGGCCCTCATGCGG CTGGAT CAGGTTCAGGGCCG GTCGGTGTTACCAGA 38 144 lysA 799871 .. 799881 - -4.6 -2.64155 TTCTCCGGAAACGCA GCCC GCT GGAC CTGCCCACCATACAA 44 104 ST40_RS03735 797195 .. 797216 - -15.9 -3.24256 ACCGTCAAAAACAAT TGACCCCGC CGAA GCGGGGTCA TGAACCTTTGTCAGA 100 48 ftsE NONE ST40_RS03710 793069 .. 793085 - -3 -2.84587 TGCGATAAAATCAAT CCACTT TTGCC AAATGG GCCTTGACGGCGAGG 41 4 ST40_RS03705 792261 .. 792282 - -2.9 -2.52464 TCGTGGGTGAAGCCA CCGCTCGGCC GTG GTCCGA-CAG CTGTCAGCGCACACC 40 29 ST40_RS03700 791376 .. 791406 - -20.6 -3.0464 AAGGCAGCCTGAAGA CAGGTTCAGGCGAT GAT ATCGCCTGAACCCG TTCAAACTGAAAGAC 100 71 ST40_RS03690 788945 .. 788961 - -12.3 -2.72511 CCGAGCGCCTGAAAG CCTGAGC CAG GCTCAGG GACGGCAGTACAGGT 72 59 ST40_RS03680 787095 .. 787111 - -3.7 -4.25104 TGCGCTCTACGAAAA GATCG CTGAACC CGATC ATCGCAAGAGCTACC 62 145 ST40_RS03670 785559 .. 785569 - -6.8 -2.74144 GGGGTACCGCCAAAC GCAG TCG CTGC CGCCGATCACGGGAG 52 32 ST40_RS03665 NONE ST40_RS03660 783993 .. 784016 - -19.6 -3.89215 CCCGACAAAGCGAAA CGGCCCCGGA ACTT TCCGGGGCCG TTGAATTTTCAGCGC 100 78 ST40_RS03635 779877 .. 779887 - -2.4 -3.84961 TAGTCAACCATCAAA GGCG CTT CGAC AAATATGGGCGGTTT 52 3 ST40_RS03600 770807 .. 770823 - -4.3 -4.0942 GAGCCATGACAGAAA CACCGGA CAA CCCGACG AGCCGCTACAGCCAG 61 330 htpX 769553 .. 769583 - -20.5 -3.71672 CGGTATCAAAATCAA GCGCCGCAGACCGG TCTG CCGGTC-GCGGCGC ATCTGGTCATACTAA 100 105 ST40_RS03585 767880 .. 767915 - -6.8 -4.1721 AGGCACAGCCGAAAA CGGCTGCATG-CGGAAC AAA GGCCCGCCATGCATCCA TTTCAAGGAGCGTTG 70 232 ST40_RS03580 766165 .. 766175 - -5.4 -2.5001 ACAATGGCCATGAAT TTGC CTC GCAA TTGGGGACGGTCCGG 46 86 purH 764342 .. 764361 - -7.8 -4.68103 CGAATCGCAAGAAAA CGGCAGGC GAAT ACCTGCCA AAGCTTGCTGCAGAC 86 208 ST40_RS03570 762153 .. 762173 - -18.3 -5.27335 TTGCCCAAACAAAAA CGCGCCGGA AAA TCCGGCGCG CTTCATGTTCAGATG 100 55 ST40_RS03555 754785 .. 754810 - -13.3 -3.15999 GCGTCATACACCCAA TCGCGCGGC TTGTCACC GCCGCGCGA CGCTCCGTTATCTCA 84 38 argC 753727 .. 753742 - -6.8 -2.74784 AGGCCTGAAAACGGA TGCCAC TTAC GCGGCA AGGCTGGTTGTCTGA 52 16 leuD 753044 .. 753063 - -11.4 -5.85244 AACCAAAACAAAAAA GCCGGGTC GTGA AACCCGGC TTTTCAAAAGTCATT 100 51 ST40_RS03540 750996 .. 751010 - -7.1 -3.72576 CCTTTCCGCATGAAA CACCC GACCG GGGTG GAGGGTGCTCGACTT 62 99 ST40_RS03525 748460 .. 748488 - -11 -3.12895 GCTGGGAGGAACAGA CGATGTCCCGCGG CGAA CCGCGGCACA-CG GCGATCCTGGAAAGC 69 234 ST40_RS03515 746839 .. 746860 - -3.6 -4.41895 AAGCTTCAAGGAAAA GCGTCCGC CATCTT GCGGACAT TTGCCCCTATATGGC 66 248 dapF NONE mtaB 744475 .. 744528 - -26.9 -2.62616 GGAGGTCCGACAGGA CCGTCTCGAAGGATGGGCAGCATAC ACGG GCAAGCGGCCCATCCTTCGAGACAG CGCTGCGCGCTTCCT 100 126 ftsY 742851 .. 742893 - -4.7 -3.53444 GCACTGCTTTGCAAA TGTCGCAAGGCGCCCAAAC GAACG GGTCCAGCGCCTTGCGGGA CGCTCGCGTTAAGCC 52 34 ST40_RS03495 741016 .. 741038 - -2.6 -3.322 AGGCCGATACAGCAA GCACTTCGAT GAA AACGAAGCCC CGATGCGGATTGTTC 44 333 ST40_RS03470 737171 .. 737190 - -3.4 -4.14392 CGCGAACGTCGAAAA GGCCATCG CCCT CAGCGGCC GGGGCAACAAGATCC 62 307 ST40_RS03455 NONE hisC NONE ST40_RS03445 732165 .. 732194 - -12.1 -5.39721 TGACGAGACAAAAAA GCCCTTGAGGGTC GAGC GATCCTCAGGGGC TACAATGCAATGGGG 100 92 ST40_RS03435 NONE mtgA 729121 .. 729144 - -5.2 -3.31726 GGTCTGGATAGAACA GGCGG-TGGCG AAG CGCTATCCACC TTCGTCTATTTCCCC 53 31 rpmF 728690 .. 728716 - -8.7 -5.45802 CGCTGAAAAGAAAAA GGCCGGCC-CGT CGAA ACAAGGCCAGCC TCAATCTTGATTTGC 100 92 ST40_RS03420 728001 .. 728017 - -12.3 -3.86897 GTCATTCCTGACAAA TGCAGCG AAA CGCTGCA CGCCGATCCGGCAAC 86 180 ST40_RS03410 726415 .. 726432 - -9.8 -4.39287 TCAATCACAGGAAAA GGCGCC CGTTGT GGCGCC TTTTTTATGGGTGCT 88 30 phaR NONE ST40_RS03390 722709 .. 722726 - -8.3 -3.30474 TCCGACAATGACGAA GCCTGCG CAGT CGCCGGC ATTGCCGCTGCAAGC 59 252 ggt 720515 .. 720536 - -5.8 -3.20345 AACCTCATATGAATA TCGGCGCG TCCAAC CGCACCAA ACACCCGTGAGGCGG 54 90 ST40_RS03375 718709 .. 718731 - -6.2 -4.70659 CCCTATATTCAAAAA CAGATCCGGA CTC CCCGGACCTC CGAAAGACTGGCCAC 78 402 ST40_RS03330 712007 .. 712020 - -3.1 -4.83615 GATTGTGTACAAAAA CAATC TTTC GATCG TGGCATATGTTGGGA 74 355 ST40_RS03325 711199 .. 711211 - -9.1 -3.16191 CGACAGCGTCATGAA GCCGT ATG ACGGC CGCCTGAAAGCCTGG 61 252 ST40_RS03305 707793 .. 707807 - -6.4 -3.54424 GCCGACCTTTTCAAA CAGATG GCG CATCCG GTGACCGTCTCGGCA 57 234 ST40_RS03300 707135 .. 707149 - -8.6 -5.09173 CAACATTTCAAAAAA TCTGGA AGA TCCAGA AAGCTCGAAACAGAA 95 412 ST40_RS03285 NONE ST40_RS03280 704103 .. 704149 - -5 -4.65895 CGGGCCATGGAAAAA CTGAAATCCGCCCTG-CTGGC GGCACA GCCGGACAGGGCCGCCTACAG CACCTGACCTCTATC 73 144 pyc 693689 .. 693715 - -17.3 -4.9725 AGGTGGACACAAAAA GGCCGCCCGGA ATGGA TCCGGACGGCC TTTGGTTGATGCTGT 100 51 ST40_RS03230 689688 .. 689717 - -15.7 -3.30159 CCAATTCGCGGACAA GCCGTCAGGCGGC CGAT GCCGCCTGACGAT CTGTTCGATTATTCG 100 34 ST40_RS03225 NONE ST40_RS03220 NONE ST40_RS03215 685812 .. 685824 - -4.8 -4.38712 CCGATTTTGACAAAA GCAG GAAGT CTGC CGAATTTGCCCCCGG 68 104 ST40_RS03210 682656 .. 682688 - -13.5 -4.13945 AGTCCCACGGCAAAA GCAAAGGTGCGGC CCCAAAC GCAGCACCTTTGC GCCAATGTGTCGTCA 100 38 ST40_RS03190 679915 .. 679928 - -2.3 -3.81948 CAAGGCCAGAAAATA CAACC ATAG GGTAG AACTTTGGTTCACAT 52 46 ST40_RS03185 679306 .. 679318 - -9.1 -4.18494 GATCCGCATTGAAAA CACCG GCA CGGTG GAGGATGCGGTCGAC 79 86 phnF 670782 .. 670800 - -5.3 -3.737 CAACCTCGCATCAAA GCGAGCGT CTAA AC-CTCGC CGCTGACCACCAGCT 58 15 ST40_RS03120 669129 .. 669150 - -6.5 -3.49951 CAGATGCGCAGACAA CGATCGACA TTTC CGTCGAGCG CGAAAGCCTGGGCGA 58 184 ST40_RS03110 667626 .. 667648 - -4 -3.60792 GTGCGAAGGGGCAAA TCGACCGCCG GAA CGACGCCCAA GCAAGTTCACTCAAG 51 36 ST40_RS03085 NONE ST40_RS03080 660348 .. 660368 - -2.3 -3.54029 TTCCAGGAAGCAGAA CCGTTCCGG TTT CTGGGGCGG TAGGACGCGGGAAGG 47 275 ST40_RS03060 656619 .. 656630 - -3.6 -2.99471 CCAGCGGGAGACAGA CGAC ACCT GCCG TATCTGATCACCTTC 44 39 ST40_RS03055 655791 .. 655826 - -9.6 -2.87132 TCGGCGCCGGACACA TTGGACCATCGCGCCG CCCG CAGCGCCATGGACCAC GCAGGCAAGCCCTAT 59 342 ST40_RS03045 653687 .. 653700 - -3.8 -4.15006 AGACCTACCGGAAAA CGCT TTATTG AGCG GATCCCGCGCAGCGA 60 115 ST40_RS03030 650655 .. 650683 - -5.9 -4.11216 GCTGGACCCGGAAAA CTTCGGCCAGACG CAG CTTCTGGCCCAAC CTGTCGAGACTCACG 65 439 ST40_RS03015 648226 .. 648242 - -7.9 -2.99813 ACCACAGACGATACA CGGCTGA ATG TCCGCCG CCAGATCACTCTGGG 56 328 ST40_RS03005 NONE ST40_RS03000 NONE ST40_RS02995 NONE ST40_RS02990 645684 .. 645715 - -10.8 -5.50723 GGACGAAAACAAAAA GGCCTCCCGAGTGT CGCA AGACGCAGGAGGCC TTTTTCATTGCAAGG 100 48 ST40_RS02980 644389 .. 644399 - -5.4 -3.53091 ACGCCTGGCCGCAAA TCAG CAC CTGA GCCACAGGGCACTTG 55 42 ST40_RS02950 637899 .. 637919 - -18.3 -3.18452 ATCAGGGCAACTGAA GGGCCGGCA TTA TGCCGGCCC TTTTCATTTGTGGCC 100 64 ST40_RS02945 636817 .. 636835 - -13.1 -4.42851 TGAACAAACGGAAAA GCCCGGC CTTGT GCCGGGC TTTTTTGTGACCGCA 100 294 ST40_RS02920 630629 .. 630640 - -7.2 -4.17089 TTCAAATTTTGAAAA CGGG GCGT CCCG GAAGCCGGATCGGCT 74 67 ST40_RS02915 629470 .. 629494 - -20.1 -4.56914 GCACTCAAATGAAAA CCGGGCTGGTT CAT AACCAGCCCGG GCTCCGATCTGCAGA 100 82 thpR 628730 .. 628759 - -10 -4.65895 GGTTTCAGCCAAAAA CGACCCCAAACC GGCAAA GGCTTGGGTTCG TTCTGCCGGCGCGCA 91 80 ST40_RS02905 626318 .. 626348 - -15.5 -5.3658 ACGAGAAAAACAAAA TGGCGGAC-CGGGC TCTC GCCCATGTCCGCCA GAATTTCTCGGTCGA 100 95 ST40_RS02895 624333 .. 624350 - -5.5 -5.11033 TACAAGGTGAAAAAA CAGGGCC GGGA AACCCTG CCGGTCTAGAACTCC 82 43 gluQRS NONE ST40_RS02875 620258 .. 620271 - -2.3 -3.73072 AAGGTTGTGACCAAA GACGG CAAG CTGTC GGCGCAGTTCGAACA 52 133 ST40_RS02855 617259 .. 617277 - -5.2 -3.86346 CGAGCGCCTGACAAA GCCAGGCA CGC TGCTTGAC CACACGACAAGCCGG 61 392 ST40_RS02840 616257 .. 616273 - -10.1 -2.71364 CCATTTCTGCAATGA GCAGGGC CAT ACCCTGC TGGAAACAGAGCGCA 61 114 ST40_RS02830 614978 .. 615003 - -3.1 -3.25942 ATTTCCGGAGATGAA GGAGTGGAACG GGTG CGATCCGTTCC TGCCAGCTTCACTTG 45 34 ST40_RS02825 614360 .. 614396 - -2.1 -4.21343 CTGAAGACAGAGAAA CCCGGTCAATGCCTC AACCGCA GAAGCAGCTCCCGGG CAGATCCTCAGGCTG 56 33 ST40_RS02815 NONE ST40_RS02810 611218 .. 611241 - -13.8 -5.66868 AACTAACCAAAAAAA GAGCCCGGGG TTGC CCCCGGGCTT TCCAAGTTTGCGGTC 100 82 ST40_RS02805 609735 .. 609761 - -16.5 -2.87463 AATGCTCCTGAGAGA TCCGCGCGCCG TTACC CGGCGCGCGGC AGGCCATTCTAGCGC 93 34 ST40_RS02790 607012 .. 607023 - -4.4 -3.53012 TGGTGCCGGGCGAAA TGTC CGTC GACA AGGCACATGAGATCT 52 171 ST40_RS02775 603319 .. 603329 - -2.4 -3.13403 GCCGCGCTACCAAGA CCCG CTT CGGC AAGGCCGCCTATCTG 43 458 ST40_RS02655 576900 .. 576937 - -21.3 -2.64803 TGACCCGCAAATGCA GCAGGGCCGCCCGATCG GTAT CGATCGGGCGGCCCCAG ATTGCGTCTGTGTTC 100 61 ST40_RS02650 575736 .. 575750 - -4.2 -2.78463 ACGTCTTCTACCAGA CCGG CCCCGCT CCGG ACGGCGTCTGGATCC 43 448 ST40_RS02610 569102 .. 569116 - -7 -3.17075 CCGTCGGCAATTCAA GCCGCC TCA GCCGGC CGCTCCATCGCGATC 56 7 ST40_RS02605 NONE ST40_RS02600 NONE ST40_RS02595 NONE ST40_RS02590 564926 .. 564938 - -4.1 -3.24146 CGTGCCAATCAAAAC GCAAA AGC CTTGC CAATTTGTTTTCAAA 47 190 ST40_RS02585 563598 .. 563622 - -14.3 -3.06261 CCGCAATGTTCAAGA TGCTGCCGCAC CAC GTGTGGCAGCA TTTTTTGTTTCCGGT 91 236 ST40_RS02575 561959 .. 561971 - -3.3 -4.2693 AACTCATGAAAAGAA GGGTT CCA AGCCC ATGAACATTCTCATT 62 300 ST40_RS02550 557986 .. 558027 - -18.9 -2.82803 GATGGAGACGGAAAC CAAAGGCTGTCGCACAAAC GTCG GTTTCTGCGACAGCCTATG AATGGCAGTTTTCAC 100 420 ST40_RS02545 NONE ST40_RS02540 NONE ST40_RS02535 555642 .. 555656 - -4.3 -3.28791 ACCGTTCTGCGAGAA GTAAG ATCAG CTTAC TATCGATGGTATCGA 49 107 ST40_RS02505 550252 .. 550287 - -12.8 -4.7254 ATCCCGGAGCAAAAA CAAAAAACCAGCATTC TTTC GAATACTGGTTTCCTG GACCTTTCGGTCGAA 100 42 ST40_RS02500 548623 .. 548646 - -10.2 -4.2704 GGCAGCATCAAGAAA CAGGAGAGGC TCTT GCCTCCCCGG TCCCGGCTCGCGCTA 90 156 ST40_RS02485 545695 .. 545705 - -2.4 -3.51563 AAAATGGTGATAGAA CGAG CCG CGCG TGCGGTCTGCTGCGG 47 139 ST40_RS02475 545012 .. 545024 - -3.3 -3.72576 GGCTGCCGGATGAAA TCCGC ATC GAGGA AGGTCTTTCTCCGGA 54 261 ST40_RS02465 542428 .. 542443 - -6.8 -2.89608 ATGCAAACGAGGATA GCCAGA TCGT CCTGGC GGGAGATTTCAACGC 51 467 ST40_RS02455 541202 .. 541245 - -13.8 -2.74144 CTTCTATCTGCAAAT TGGTCCGGTCCCTGCTCCCG CCGC CAATCGCAGGGACCGGACGA TTTTTTTCAAAGTCA 79 63 ST40_RS02450 NONE ST40_RS02445 537888 .. 537899 - -3.6 -3.68302 GGAATACTGGAAGAA GCCG GAGG CGAC GCGGGAGAAGTTCAT 51 449 ST40_RS02435 534212 .. 534239 - -21.4 -5.19879 CGCGAAACACAAAAA GGCCAGCCTTCC TGAG GGAAGGCTGGCC TTGTTCGCCGTGTTA 100 49 ST40_RS02420 NONE aroB NONE ST40_RS02410 529725 .. 529735 - -2.4 -3.27298 TCGCTCAACGATCAA GCGC CTT GCTC AGGTTCCTGCTTTCG 43 24 ST40_RS02400 528161 .. 528180 - -9.2 -4.07568 GGTCGTTTGGGAAAA GCCGGCAG GACC CTGCAGGC TCTAAAGGAAACCGG 80 27 cobS NONE cobT NONE ST40_RS02385 524069 .. 524086 - -3.3 -3.17723 CCATGCCGAAGGGAA CTGCCGC CTAG GCACCAG ACGCGAAAAAGGCGG 45 89 ST40_RS02370 521781 .. 521808 - -10.6 -3.53012 CTCGCGCCTGGGAAA CCCTTCCCGG TTTTTTTG CCGGAAAGGG CCGAAGAAGGGTCGG 74 44 ST40_RS02365 520429 .. 520447 - -8.8 -4.63928 ACAGGATGGCAAAAA GGCCGC TTTTACG GCGGCC CTGCATCGTTTTTTT 89 114 ST40_RS02360 518456 .. 518467 - -3.6 -3.0395 ACACACGCTCCAAGA GCCG ACCT CAGC GATGTGGTTGAGAGA 43 478 ST40_RS02305 NONE ST40_RS02300 506432 .. 506457 - -10.3 -5.24531 AGTTTCCAGAAAAAA GAGCGGGCCGG GAAA CCGGCCCGTTT GTTTTAAAAAAACCT 100 194 folP NONE folK NONE ST40_RS02280 501435 .. 501447 - -9.1 -3.14132 CGGGTTGTGCACGAA CCTGC AAG GCAGG CGCACAAAGCCAGCC 63 235 ST40_RS02275 499861 .. 499878 - -2.5 -3.58343 GGGAGCACCGGCAAA GCCAGGC AACA GCCGGGT TTCACATGGAGAGTT 49 51 ST40_RS02255 NONE ST40_RS02250 494333 .. 494350 - -14.1 -4.62872 ACCAATCTGGAAAAA GGCCGCC CGGA GGCGGCC TTTTTGTATTCTTCG 100 48 ST40_RS02235 490902 .. 490918 - -9.3 -3.41051 GGATGCCGACCAGAA GCTGCGC AAG GCGCCGC CCTCCGACACTTCCA 63 494 ST40_RS02225 489378 .. 489396 - -3 -4.56597 CGCGGCTGGGAAAAA CCGTCG GACCACG CGCCGG TGATCGCCGAATTCG 67 270 ST40_RS02210 486370 .. 486380 - -2.4 -3.20382 GGTCACAGTCAGCAA CGGC AAG GACG TCACGCACCAGATCA 43 73 ST40_RS02200 484790 .. 484803 - -5.9 -3.73088 ATACCGGATCAACAA CGGAC TGTC GCCCG TGATTGCCGATCCGC 60 370 ST40_RS02190 483559 .. 483579 - -3.8 -3.61398 CGGCGGGCTCAACAA GCTCCCTG AAAGG CTGGGGGC CTCAAGCCCCGTTAG 51 93 ST40_RS02180 479811 .. 479834 - -8.8 -3.65199 AACCCGCCAGCGAAA CCGACGCAGC CACG ACTGCGCCAG TTGCAACTGAAAGTT 70 121 ST40_RS02175 477917 .. 477947 - -6.9 -4.15788 AATTGTTTCAACAAA GGGTTAACAAAAC TTTAC GTTAAGTTAACCC TCGGTATTGTCAAAG 70 50 ST40_RS02170 477389 .. 477410 - -7.9 -3.14564 GCACCTGTGCACGAA CGATAGGGG ATCT CCCCTGCCG GCCATAGATACGGGT 57 90 ST40_RS02165 NONE ST40_RS02160 475676 .. 475707 - -10.8 -3.53012 GCTGCTGCGGGCAAA GCCGGACATGCACG CAGT CGTGCACGCCCACC CGGTCCACTGCACCG 70 401 ST40_RS02135 NONE ST40_RS02130 469305 .. 469324 - -2.7 -3.75153 TCCTCCCAATGGAAA CGGCGCC ATTCAG GGCGTCA CGCTGTTCTCCGGCC 51 23 ST40_RS02125 468193 .. 468212 - -15 -5.71712 TGCCAGACAAAAAAA CCCGGTGC CAAG GCACCGGG TTTTCTTTTGACGGG 100 56 ST40_RS02105 461907 .. 461918 - -2.2 -3.78034 GAGCCATACGAACAA GC-CG GAA CGCGC GAAAGAAGTAGATTT 52 46 ST40_RS02100 NONE ST40_RS02095 460064 .. 460112 - -8.3 -3.64703 GTTGGCTCACTCAAA TTCATAACTCCACGGTTATTGAT TTG ATTGATAACCTCGGAGTTATGGA TGAGTCAAGGCACAA 68 42 ST40_RS02090 NONE ST40_RS02085 NONE ST40_RS02080 458797 .. 458811 - -3.5 -3.11272 GATCACGACGCAAGA TCCCG TCTGC CGGAA AGGTCCGTCAGCAAA 45 91 ST40_RS02075 458488 .. 458513 - -14.7 -3.27498 GATAGGGCACACCAA TGCCGTTGGCC TTAC GGCCAACGGCG CATGGAAGCCGAATT 95 67 ST40_RS02060 456065 .. 456085 - -2.6 -5.07567 CGATAGTTTAAAAAA CACCCGAAA CGAA TTTCGAG-G ACCGACCGCCCCTCG 74 345 ST40_RS02015 445571 .. 445597 - -12.9 -4.27483 ATGCAGAAAAGGAAA GGCCCGGCTGC ATAAA GCGGCCGGACC TTCGCTCAGGTCTTG 100 64 ST40_RS02000 NONE ST40_RS01995 NONE ST40_RS28735 443170 .. 443180 - -4.6 -3.53012 CGGGTTCTGGCGAAA GAGC TTG GCCC GCGTGGCATCCGGGT 52 311 ST40_RS01980 441477 .. 441503 - -7.3 -3.21354 GGAGACAGCCAGCAA GCCGCC-ATC-GG CAA CCAGACCGGCGGC CGCGTGTTCCTGTTC 54 194 ST40_RS28695 NONE tkt 437064 .. 437102 - -6.7 -3.18264 TGGCCGATCGAGGAA GTCTA-CGGCATGCACAA CTTC CCGGGCATGCCGGTAGGC GAATTCGCCATCCGC 56 48 gap 435786 .. 435805 - -3.4 -2.77899 GGCCCTTATCAAGGA TCCGGCAG CCTT CATCCGGA AGGAGACCAAGGTCA 41 190 ST40_RS28680 NONE ST40_RS28675 435417 .. 435445 - -6.7 -2.72344 CGGTATCCGGAACTA CCA-GGCACGCA ACAACA TGCGGGCCATGG AAATCGGCGACAAGG 52 1 ST40_RS28670 434721 .. 434737 - -5.8 -2.75647 GCCGAAGCAGACAAG GTGCCC TGAAG AGGCAC AACCCATTCCGGCTC 50 45 ST40_RS28665 433533 .. 433554 - -2.3 -2.64155 GCGCGTGGAAAGGCA GAGC-AATGG GCG CCATTAGGTC TATCGGCGTCGTTGG 38 6 ST40_RS28660 433019 .. 433029 - -6.8 -3.53224 GATGCCCTGCGCAAA CGTG TGA CACG CCTCGCCAACGCGGC 60 138 hemC NONE ST40_RS01905 NONE ST40_RS28650 NONE ST40_RS01900 NONE ST40_RS28645 NONE ST40_RS01895 NONE ST40_RS01890 424740 .. 424753 - -2.3 -4.16279 CAGACGAGGCCAAAA CAAGC ACCT GCTGG ACGATACGATTGTCT 60 382 ST40_RS01885 423481 .. 423509 - -4.5 -3.53761 TAAGCGTTCGGCAAA TGGTTCCCTTGAA ATT TCCAGGAGACCCA AGAGGAACGATCAGC 52 61 ST40_RS01880 422511 .. 422532 - -5.8 -4.78848 GCTGGAAACAGAAAA GC-CCAGCC TCAAT GGCCGGCGC TGCGCCTGGCGTGTT 81 12 ST40_RS28585 416599 .. 416609 - -3.2 -3.73224 GCACTCGGGAGGAAA CCTC ATG AAGG GTGAAGTCCGCTCGA 54 95 ppk2 412022 .. 412036 - -4.2 -3.92522 CCGCAAGGGCAGAAA GGCC GGAGAAA GGCC TGCTCGCTGGTGAAA 60 199 ST40_RS01825 410882 .. 410908 - -19.5 -4.15044 GGTCTCCTCAATAAA CAGGTCCCGGC TTGGG GCCGGGACCTG GCTTTGCGGGAGGCA 100 56 ST40_RS28565 NONE ST40_RS01815 NONE ST40_RS01810 NONE ST40_RS28560 NONE ST40_RS28555 NONE dhbA NONE ST40_RS28545 404253 .. 404263 - -2.4 -3.14132 GCGGGGCTTCATGAA GGGC GAT GCCT TTGTCGTCGGATCGA 43 424 ST40_RS28535 401197 .. 401219 - -2.7 -3.64703 CTTTTGCCAGCGAAA CAACAGTAA CCAAT CTCCTGTTG CGAACACTGCCTCTT 51 54 ST40_RS01780 NONE ST40_RS01775 398074 .. 398084 - -5.4 -3.20941 CAGCAACCATCAAGA CGAT GAC ATCG GCTTCAGCAAGCGGC 52 152 ST40_RS01770 NONE ST40_RS28525 NONE ST40_RS28515 NONE ST40_RS01765 NONE ST40_RS01760 NONE ST40_RS28510 NONE ST40_RS28505 NONE ST40_RS01755 NONE ST40_RS28500 391831 .. 391847 - -7.2 -3.51976 AACCTTTGAAACCAA CAGCGG TCGCG CCGCCG AAAAGCTGCCGCGTC 62 506 ST40_RS01745 390145 .. 390168 - -3 -2.64616 CCCCGACCTAGAGCA CTTTTGCCGG CGTT CCAGCGAACG CGCGCGGCAGCTCTG 40 143 ST40_RS01740 NONE ST40_RS01735 NONE ugpC NONE ST40_RS01725 NONE ST40_RS01720 NONE ST40_RS28460 NONE ST40_RS01715 NONE ST40_RS01710 NONE ST40_RS01705 NONE ST40_RS28445 NONE ST40_RS01700 NONE ST40_RS28440 NONE ST40_RS01695 NONE ST40_RS28435 NONE ST40_RS01690 NONE ST40_RS28430 377987 .. 378007 - -2.6 -4.07568 GGCGTGTGGCGAAAA CGGCCTTGCA GTT TGCA--GCCG GACGGGCGCAAGCAC 57 380 ST40_RS01670 375557 .. 375567 - -3.2 -3.89291 GGAAGAGCAGAAGAA GACA ATC CGTC AGAAATTGATGACGA 56 330 ST40_RS01655 374579 .. 374614 - -16.4 -3.84246 CTTCGAAGGACCAAA CAAAAGGGACGAACCTC GAA AAGG-TCGTCCCTTTTG TTTTTCGGGCGAGAG 100 92 ST40_RS01640 372561 .. 372575 - -7 -3.71848 GGTGGCGATGAACAA GCTGCG GCC CGCCGC ACGCTGGCTGGACAA 63 310 ST40_RS01625 NONE ST40_RS01620 NONE ST40_RS28385 NONE ST40_RS01610 NONE ST40_RS28380 366400 .. 366415 - -2.6 -3.91897 GCTTTGACTGACAAA TTCGCGA AGA TC-CGAA AAGGTGATTGAGATC 52 76 ST40_RS28370 NONE ST40_RS01600 NONE ST40_RS28365 NONE ST40_RS01595 NONE ST40_RS28360 362283 .. 362307 - -7.2 -4.15222 AGCTTCGGGAAGAAA TCGCCGACCAT ACCG ATGG-CGGCAA ACTTTACACCGACAG 74 425 ST40_RS28350 360099 .. 360112 - -2.3 -4.18702 ACAATGCCGAAGAAA CAGAC GAGT GGCTG CAAAGTCCCGTCCGT 60 263 ST40_RS28320 355008 .. 355018 - -6.8 -4.11692 CATCCAGCCGGAAAA CCAG ACG CTGG CCTCCATCACGTTCC 70 175 ST40_RS28315 354108 .. 354121 - -3.7 -4.652 AAACCAGCTGAAAAA CGGCG CAAG CGTCG ATGACCTCTTGGTTC 70 45 ST40_RS28310 NONE ST40_RS01555 NONE ST40_RS28305 NONE argJ 351233 .. 351248 - -3.9 -3.36581 GAAACGCTGAATTAA CGCGC GGTTAA GCACG TTTGCGGGCAGTACC 49 61 mutT 350724 .. 350736 - -3.3 -2.71712 CTTCCCCGGCGAAAG GCCTG CAA CATGC GGTCTGCGACGGTTT 41 86 ST40_RS01540 350512 .. 350531 - -4.2 -3.75051 CAGGAACGGAAAATA GGCGACTA GAGG TAGCCGAC GGCCCGGATCAGCTG 57 34 ST40_RS01530 348579 .. 348605 - -3.6 -3.83026 CCGCCGCACACCAAA TCCGGGCGTT ATATGCG AGCGCGCGGA GAAAACTCAAGAGGA 56 53 grxC 348264 .. 348282 - -7.4 -2.96695 TCGTTCAGTAAATCA GGACGC GAGCAAT GCGTCC AGTTTACCTGCACGT 56 4 ST40_RS01520 347344 .. 347366 - -3.5 -3.54424 GTGCACTGTCGCAAA CGAGCGTGTAT TTG AT-CACGC-CG AAATCTCCTTCAGAC 51 18 ST40_RS01515 NONE ST40_RS01510 NONE ST40_RS28280 NONE ST40_RS28275 NONE ST40_RS28270 NONE ST40_RS01490 NONE ST40_RS28265 NONE rfbF NONE rfbG NONE ptsP NONE ST40_RS28250 NONE prfA 338724 .. 338740 - -2.1 -3.57792 GCACGGACCGGTAAA GCTGGCC GAT GGTCACC TCAGGCCTCTTCGGT 47 26 prmC NONE ST40_RS28245 NONE ST40_RS01470 NONE ST40_RS28240 NONE ST40_RS28235 NONE ST40_RS28230 NONE clpB NONE ST40_RS01460 NONE ST40_RS01455 NONE ST40_RS28225 NONE ST40_RS28220 NONE ST40_RS01450 NONE ST40_RS28215 NONE ST40_RS28210 NONE ST40_RS28205 NONE ST40_RS01440 NONE ST40_RS28200 NONE ST40_RS01435 NONE ST40_RS01430 NONE ST40_RS28195 NONE ST40_RS28190 NONE ST40_RS28185 NONE ST40_RS01425 321179 .. 321217 - -16.2 -4.1899 GTAGCGCACTTAAAA TGATCTTTTTGATGCGCC AGG GGCGCATCCAAAAGATGA ACATTGACTAATGAG 100 41 rrf 320807 .. 320818 - -7.2 -3.06796 GCGCAGCGGAGGCAA GGCC GAGT GGCC GCCGGCCGGTCAGGC 57 124 ST40_RS01415 320556 .. 320583 - -20 -5.38958 AGGCACAAACAAAAA CAGCCCCGACTT TTTC AAGTCGGGGCTG ATGTCGGTGGTTGCG 100 33 ST40_RS01410 320013 .. 320026 - -3.8 -3.84451 CTGTTCAAATGGAAA GACG ATCAAA CGTC AGGCGCTCGAAGCAA 56 1 ST40_RS01405 318901 .. 318919 - -11 -3.49858 CGAAGCACATTACAA TCTGGCGA ACT CCGCCAGA GCCAGTTCCAGTTAC 77 295 ST40_RS28165 316927 .. 316951 - -2.8 -4.15788 AAGGCGCCGAAGAAA GCGCTCAAGGC CTCC ACCTTGCGC-C AGCAAAGGGAACACA 60 325 ST40_RS28160 NONE ST40_RS28155 315035 .. 315059 - -8.5 -3.67 CGAAGCTGCAAAACA GCCTGGCCC GCTTCCT GCGCCAGGC CTATGCGCTCGCCCG 68 9 ST40_RS28150 313799 .. 313818 - -3.4 -3.28447 CGAGGCAGCAGAAGA CTACCAGG ACGG CCGGGTGG AGCTGGTTGTGGAGT 47 78 ST40_RS01375 NONE ST40_RS28145 NONE ST40_RS01370 NONE ST40_RS28140 NONE ST40_RS01365 NONE ugpC NONE ST40_RS01360 NONE ST40_RS28130 NONE ST40_RS01355 NONE ST40_RS28125 NONE ST40_RS01350 NONE ST40_RS28120 NONE ST40_RS01345 NONE ST40_RS28115 NONE ST40_RS28110 NONE ST40_RS01340 304775 .. 304793 - -3.1 -3.96148 CGGCGGGAGGAGAAA GAAGGCC AGACA AACCTTC TTTCACATGATTTCA 56 38 ST40_RS01335 NONE ST40_RS01330 NONE ST40_RS01325 301636 .. 301649 - -2.4 -2.51464 GGAGCAGGCATCAAT CCAT TGGCTC ATGG TGTCATCCCTCGTGT 38 45 ST40_RS01320 NONE ST40_RS01315 NONE ST40_RS01310 NONE ST40_RS01305 NONE ST40_RS01300 NONE iolG NONE ST40_RS28090 NONE purU NONE iolC NONE iolD NONE iolB 290437 .. 290456 - -16.4 -5.4833 TGATCTAACAAAAAA GGCCGCCC TATT GGGCGGCC TTTTTGTTTATTTGG 100 329 hisD 283672 .. 283685 - -5.9 -3.36273 CGTCCTCAACATCAA GGACC GGCT GGCCC GCCTGCAGGGTGTCG 56 264 ST40_RS28030 280952 .. 280974 - -7.7 -3.12999 CTATCGGACATGCAA GAGAGCTGG TGTAC CCAGTTCTC CCTCAACCAACAGAC 57 80 ST40_RS01240 NONE ST40_RS28025 279650 .. 279666 - -2.1 -3.65812 TGCTGGCGAAGACAA CGGCCTG TTT CACGCGG GCGGCTATTGCGGGT 50 88 ST40_RS28020 NONE ST40_RS28015 NONE ugpC NONE ST40_RS28005 275466 .. 275487 - -2.1 -3.05521 ACTACATCGCCAAGA TCGC-CGGCC CCA GGGCGCGCGG TGGTCTGTTCCTGCT 42 173 ST40_RS28000 NONE ST40_RS27995 NONE ST40_RS27990 272401 .. 272422 - -3.7 -3.19389 GAATTCATGGATGAA GGCATGTTCG CAA CGCACAT-CC GCACCATGCGCCAAC 47 36 hisD NONE ST40_RS27980 NONE ST40_RS01200 NONE ST40_RS27975 NONE ST40_RS01195 NONE ST40_RS27970 268104 .. 268118 - -2.7 -2.82623 TTCGTTCGACAACGA GGGGC GCAAT GCCTC AACCATCCTGATGCG 41 13 ST40_RS27965 NONE ST40_RS27960 266498 .. 266519 - -5.9 -3.75153 CGGCTGGAAGTCAAA TTTGAGGAT TGGG ATCCACAAA CCGAGGATTTACACA 60 149 ST40_RS01180 265576 .. 265586 - -2.4 -4.78848 GTTCGAAACAGAAAA CCGC AGC GCCG ATCGAACATCTTAGA 72 36 ST40_RS27945 NONE ST40_RS01175 NONE ST40_RS27940 NONE ST40_RS27930 NONE ST40_RS01170 NONE ST40_RS27925 NONE ST40_RS01165 NONE ST40_RS01160 NONE ST40_RS27915 259021 .. 259051 - -8.9 -5.11033 TACAATCCCAAAAAA GCGGCCGGTCCGC GACTA ACGAACCGGCCAA GGCGGACATTGCCTG 100 126 ST40_RS01155 257115 .. 257129 - -2.8 -4.13767 CCTGCTATCGGAAAA GCAG CAAAAAC CTGC AATATGACTTAGAAA 58 226 ST40_RS01150 255906 .. 255939 - -8.9 -3.13728 AGTACGTACAGGCAA CTTGCCGGTTCCAACC ATG GGC-GGAACCGGTAAA TCCACTCGAATTGAA 63 414 ST40_RS27890 254886 .. 254903 - -5.5 -2.92777 GCGCAGACAGCAAAG GGCATCC GGAC GGACACC ATCGTCGTCAGTGGC 49 166 ST40_RS27865 248364 .. 248378 - -9.2 -3.63627 TCTCCAGACTGGAAA CCGCCG CAT CAGCGG AAGGTTACGACGTGA 68 486 ST40_RS01090 245007 .. 245034 - -15 -3.90048 CCCTGCGCAAAAAGA CATCCTGCGTTC TTGC AAACGCAGGATG CTTGCGCGCCGGTTT 100 84 ST40_RS01085 244440 .. 244470 - -4.6 -4.37886 TCACGCTCCAGAAAA CCGGATGCAACCGC TTC GAAGCTGCATTCAG GTGTCGGGCCTCAGT 68 36 ST40_RS01080 243685 .. 243721 - -16.5 -3.57263 AGCCTGATCCTGAAA GGGCCGGTCCAGTGACC GGT GGTCGCTGGACCGGTAC GGAGCTCCGGCTACC 100 36 ST40_RS27820 239679 .. 239691 - -2.6 -2.54841 TCGCAAGAAAACGAG GCGG TATAT CCAC GGCGTCTTTCAGCGT 38 102 ST40_RS27815 NONE ST40_RS01065 NONE ST40_RS27810 NONE ST40_RS27805 236251 .. 236263 - -7.7 -3.32498 CATTCCAGACATCAA CGACA CCC TGTCG ATTGCCTGGGGGTCC 59 291 ST40_RS27790 233160 .. 233170 - -8.2 -3.86346 GCAGCTCTCCAGAAA GCCG AAG CGGC CCTGCCGAGCGCCCA 71 130 ST40_RS27785 NONE ST40_RS01045 NONE ST40_RS27780 NONE ugpC NONE ST40_RS27770 NONE ST40_RS01035 NONE ST40_RS27765 NONE ST40_RS01030 NONE ST40_RS27760 NONE ST40_RS27755 NONE ST40_RS01025 NONE ST40_RS01020 NONE ST40_RS27750 NONE ST40_RS27745 NONE ST40_RS01010 NONE ST40_RS27740 NONE ST40_RS01005 NONE ST40_RS27735 NONE ST40_RS01000 NONE ST40_RS00995 222615 .. 222630 - -6 -2.71731 CCCACGTGCGAAGCA CGGGCC TTGA GGCCTG ACGGTAAGGTCTAGT 50 50 ST40_RS00990 NONE ST40_RS00985 NONE ST40_RS00980 219173 .. 219206 - -11.7 -4.58685 AAAGTCTTTCAAAAA GGCCTGCGAGGCA GGGCGAAG TGCCCCGCAGGCA GTTTGCTGCCCGTTG 100 49 ST40_RS00975 217909 .. 217919 - -2.4 -3.39289 CAAAAGAGTTTAGAA GCGC CGC GCGG AAAAGGCGGCCATAT 45 9 ST40_RS00970 NONE ST40_RS00965 215665 .. 215693 - -7.4 -3.43492 CGATATTTATGACAA GTCCCGCTAGGG AAACA CCCCAACAAGAC CAGTCATTCTCTACG 61 58 proC 214225 .. 214239 - -7 -3.92373 GACGGCAGCCAGAAA CTGCCG CAA CGGCTG CTGGCACCGATCCGG 68 380 ST40_RS00935 NONE ST40_RS00930 NONE ST40_RS27665 NONE ST40_RS00925 NONE ST40_RS27660 NONE uxuA NONE ST40_RS00915 NONE ST40_RS27655 NONE ST40_RS00910 202290 .. 202305 - -4.7 -3.60098 ACTCTTCAGGCGAAA TCCTG CAGGTT CAGGA CCGGCTGCACGCGCG 52 0 ST40_RS27645 NONE ST40_RS00905 NONE ST40_RS27640 200960 .. 200979 - -6.4 -4.22009 AGCACTCAATACAAA CCTCCGCA TCAC TGCGAAGA CCTGCAGAATTAACA 67 56 ST40_RS00900 199422 .. 199438 - -4.3 -3.87815 GGTCATCCTTAGAAA GGAGGTG ATC CAGCCCC AGGTTCCCCTAGGGC 59 6 ST40_RS00895 199125 .. 199168 - -3 -4.15066 GACGCACAAACCAAA CATGCCGAGGGCCACCAAATC GAA GAGTTGGTGGGCCGAGG-AGG ACTTGAACCTCCGAC 60 10 ST40_RS00890 198918 .. 198944 - -10.3 -4.59342 CCGAGGACAAACAAA TCATAATGTCG TCGGG CGACATCATGA ACAAAGTGAATGGTG 95 36 ST40_RS27630 NONE ST40_RS00885 195766 .. 195804 - -16.2 -4.1899 GTAGCGCACTTAAAA TGATCTTTTTGATGCGCC AGG GGCGCATCCAAAAGATGA ACATTGACTAATGAG 100 41 rrf 195394 .. 195405 - -7.2 -3.06796 GCGCAGCGGAGGCAA GGCC GAGT GGCC GCCGGCCGGTCAGGC 57 124 ST40_RS00875 195148 .. 195170 - -12.7 -5.63504 AATGGCACAAAAAAA CCCCGCCAG GATAT CTGACGGGG TTTTATTTGGTTGCG 100 33 ST40_RS27615 193478 .. 193506 - -8 -4.02132 GGGCAAACGGACAAA GGGCAATGGCGA ACTGA CCGCCAGAGCCC GTGACTTCATTGAGA 71 222 ST40_RS29650 188146 .. 188180 - -9.3 -3.65812 TCTTGTTGAACAGAA CGCCTTGATGGGATT GAAGA ATTCCGACCAAGGCG TCGTTCTGGACCTGG 70 70 ST40_RS29645 187750 .. 187776 - -15.9 -3.29144 CGACGTTCTCTACAA GGGCGAAAGCC TGAAG GGCCTTCGCCC GGACCAGGTGCTTCG 100 98 ST40_RS00815 NONE mprF NONE ST40_RS00810 NONE ST40_RS00805 NONE hpaH NONE ST40_RS29615 NONE ST40_RS00795 NONE ST40_RS29610 NONE prpB NONE ST40_RS29605 NONE ST40_RS00785 NONE ST40_RS29600 NONE ST40_RS00780 NONE ST40_RS00775 NONE ST40_RS29595 NONE ST40_RS29590 NONE ST40_RS00770 NONE ST40_RS29585 NONE ST40_RS29580 173455 .. 173466 - -3.6 -3.36327 TCACTCTACGCAGAA GCGA CCAG CCGC TGCGGTAGCCCGGCC 49 66 ST40_RS29575 172483 .. 172498 - -3.2 -3.54935 GAAACCGCGTTCAAA TCCCGC ACTG GCGAAA TCGCGTCCACACTCG 49 50 ST40_RS29570 NONE ST40_RS27525 NONE ST40_RS29565 NONE ST40_RS29560 NONE ST40_RS27520 NONE ST40_RS00755 NONE ST40_RS27515 NONE ST40_RS27510 NONE ST40_RS00750 NONE ST40_RS00745 NONE ST40_RS27505 NONE ST40_RS00740 NONE ST40_RS27500 NONE ST40_RS00735 162078 .. 162098 - -10.3 -4.1891 GTCCGGCAAGACAAA GCCGGATGC CCC GCTCCCGGC AGACGCGCACCTGTC 86 305 ST40_RS29515 NONE ST40_RS27485 NONE ST40_RS29510 NONE ST40_RS27480 NONE ST40_RS29505 NONE ST40_RS00730 NONE ST40_RS27475 NONE ST40_RS00725 NONE ST40_RS27470 NONE ST40_RS27465 NONE ST40_RS27460 NONE ST40_RS27455 NONE ST40_RS00720 NONE ST40_RS29495 NONE ST40_RS00715 NONE ST40_RS00710 NONE ST40_RS00705 NONE ST40_RS00700 NONE ST40_RS00695 NONE ST40_RS29455 NONE ST40_RS29450 NONE ST40_RS27415 NONE ST40_RS00690 NONE ST40_RS27410 NONE ST40_RS27405 NONE ST40_RS00685 NONE ST40_RS27400 147422 .. 147437 - -4 -3.02144 TCAGGCCTTTGAACA GAACTC GAAC AAGTTC ACCTCGCAGGTCGCC 43 363 ST40_RS00675 145766 .. 145790 - -2.2 -3.28791 ATGGGGCTTGCACAA TCTG-TCAGAC GCAC GCCTGAGCAAA CAAAATAAAGCTGGC 44 123 ST40_RS29425 144459 .. 144479 - -9.7 -2.7497 AGACCAGCCGGAAAT CGTCCCG GGCTTGT CGGGACG GCTTGAGCTTACGCG 64 203 ST40_RS00660 142428 .. 142441 - -2.3 -3.72302 GCGATAGGAAAAAAT GCCTG CAGC CAGGT CTCGTTTCTACGCAA 52 57 ST40_RS00655 NONE ST40_RS00650 140268 .. 140279 - -4.4 -2.99947 GAACGGTGATACAGA CCAT TACC ATGG ACATCCGACGCCTTT 46 41 ST40_RS00645 139420 .. 139434 - -4.2 -3.07816 CTGCGACGGAGGTAA GAAGCA CAA TGCCCC TTTTCAAATGACGGA 47 116 ST40_RS00640 139036 .. 139062 - -19.5 -5.4251 GGTAGACACAAAAAA GCGGCGAACGG TCCAG CCGTTCGCCGC GTGTTCATCTCGTGC 100 99 ST40_RS29405 NONE ST40_RS00635 NONE ST40_RS27345 NONE ST40_RS00625 NONE ST40_RS27340 NONE ST40_RS00620 NONE trbB NONE ST40_RS29390 NONE ST40_RS29385 NONE ST40_RS27335 NONE ST40_RS00615 NONE ST40_RS00610 NONE ST40_RS27330 NONE ST40_RS29380 NONE ST40_RS00605 NONE ST40_RS27325 NONE trbJ NONE ST40_RS29370 NONE ST40_RS27320 NONE ST40_RS27315 NONE trbL NONE trbF NONE ST40_RS00600 NONE trbG NONE ST40_RS29350 NONE ST40_RS27310 NONE ST40_RS00595 NONE trbI 127040 .. 127055 - -10.4 -3.19449 CAAAGACCGGAGCAA CGGCAG GGAC CTGCCG AGACGGATGTTCGGA 71 55 ST40_RS27295 NONE ST40_RS00585 125414 .. 125436 - -6.3 -3.14132 CCCGGCGGGTATTAA GACGGGA ACTATCCAA TCCCGTC AACCGCCTAAGGCCA 52 65 ST40_RS00580 124696 .. 124708 - -10.5 -3.14211 ATTGCTCCGGATGAA CGGGC TCA GCCCG CTTTCTCTCCAAGAT 69 18 ST40_RS00575 NONE ST40_RS00570 122825 .. 122843 - -5.8 -4.07885 GACGGCCTCTTAAAA GCAGGCTG CGA CCGCCAGC CGACTTGTTTAGTCG 67 34 tkt 119030 .. 119045 - -5.4 -3.33696 TTGCCCTGGAAGGAA CGCGAA GCCG TTCGCA CGATCTTCGAGGAAG 52 442 ST40_RS00545 NONE ST40_RS00540 NONE ST40_RS00535 113885 .. 113895 - -2.4 -2.72043 AAGGCTTCGCCAAAG GTCG GCC CGGC GGGGCGTTTAGTGCC 39 33 ST40_RS27240 NONE ST40_RS00530 NONE ST40_RS00525 NONE ST40_RS27235 NONE ST40_RS27230 NONE ST40_RS27225 NONE ST40_RS00515 NONE ST40_RS27220 108267 .. 108282 - -2.4 -3.69256 ACCGACGGAAGAGAA CGGTCC ATAC GATCCG TCCCGCGATTCCACG 50 173 ST40_RS29260 NONE ST40_RS27215 107267 .. 107290 - -3.8 -3.68351 GCGGCATGATGCAAA GATGACAGTG CATT CACCTTCACC CCGGTCATTTACCAG 53 15 ST40_RS29255 106005 .. 106029 - -3.4 -3.17319 GGGAACTGATCAACA CGCAGACCCA GGCAG TGGAACAGCG CATCCTGTCCTCCAA 45 54 ST40_RS00495 NONE ST40_RS29250 NONE ST40_RS00490 NONE ST40_RS29245 NONE ST40_RS29240 NONE ST40_RS00485 NONE ST40_RS29235 99312 .. 99336 - -10.7 -2.95298 TTGATCTAGGACACA GGAACGCGCCT TGC AGACACGCTCC CTCCAGGCAACCAAA 68 343 ST40_RS29220 NONE ST40_RS29215 NONE tnpB NONE ST40_RS00465 NONE ST40_RS29205 93780 .. 93798 - -6 -3.17392 GACGCCGGAATTCAA GCCAGA TTTTTTC TCTGGC GCACATTGGCATTTG 54 358 ST40_RS29195 NONE ST40_RS00450 92400 .. 92412 - -6.2 -4.07568 CGGGTGCCCCTAAAA CGGG GGAGG CCCG GCAGTTTGGAGTCTG 67 98 ST40_RS00445 91196 .. 91209 - -2.3 -3.49835 CCGAAGAACATAATA CACTC CAAC GTGTG GTTATTTGTTCCCAA 47 27 ST40_RS27150 NONE ST40_RS27145 NONE ST40_RS27140 NONE ST40_RS27135 NONE ST40_RS00435 NONE ST40_RS27125 NONE ST40_RS00430 NONE ST40_RS00425 NONE ST40_RS00420 NONE ST40_RS27120 NONE ST40_RS29135 NONE ST40_RS00415 NONE ST40_RS29130 NONE nosZ NONE ST40_RS29125 NONE ST40_RS00410 NONE ST40_RS27110 NONE ST40_RS00405 NONE ST40_RS29120 NONE ST40_RS27105 NONE ST40_RS29115 NONE hemH NONE ST40_RS27100 NONE ST40_RS29110 NONE ST40_RS27095 NONE ST40_RS00395 NONE ppk2 NONE ST40_RS00390 NONE ST40_RS27090 76887 .. 76905 - -6.6 -4.70659 GCCGATATCGAAAAA CCGCGGCA ATT TGCGACGG CTGCCGCCTCGCTGC 81 426 ST40_RS29085 NONE ST40_RS00370 NONE ST40_RS00365 NONE ST40_RS29080 NONE ST40_RS29075 NONE ST40_RS00360 70079 .. 70102 - -15.2 -5.37593 CCGGAAATGAAAAAA CCCCGCCGGC AAAC GCCTGCGGGG TTTTGTGTTTTTCGA 100 56 ST40_RS29065 68108 .. 68138 - -5.2 -3.06815 ACGGCTGCGAATACA TGACCGGCGGCGTC GTC GTCGTCATCGGCCA GACCGGGCGCAACTT 50 6 ST40_RS29055 66810 .. 66826 - -3.5 -3.55444 TGCCCAGGGTGCAAA GCCCGGC GAA GGCGGCC AGTTGCCGGGTCACA 51 240 ST40_RS27025 NONE ST40_RS29050 NONE ST40_RS27020 NONE ST40_RS27015 64120 .. 64133 - -3.7 -3.78934 TTCTTTGCAGAAGAA CTGGC GAAC GCCGG CACACCGCTTCCCGA 56 18 ST40_RS00345 NONE ST40_RS27010 NONE ST40_RS00340 NONE ST40_RS27005 NONE ST40_RS27000 NONE ST40_RS00335 60989 .. 61006 - -8.4 -3.21218 ATCCCCCATCATCAA GCGGCA TCCATT TGCCGC ATGCGTGTTAGTCAT 62 33 ST40_RS00330 NONE ST40_RS00325 NONE hemA 58623 .. 58655 - -2.6 -3.05715 AATCTCTTCATGCAA GCGCCAGACCG-GGT TTGC ACCGCAGCCTGTCCC GCCAATCCGGGGGAC 42 30 ST40_RS26980 NONE ST40_RS00315 57970 .. 58004 - -13.7 -2.87146 GCCCCTCACAACAAG CTTCAG-GCCGGCTCC CTGG GAAGCCGGCCCTGAAA GTGTCAGACAGCTTG 81 51 ST40_RS00310 56425 .. 56448 - -11.8 -3.62597 GGCACTTTTCAAGAA TGG-CGAACGC CAG GCGTTCGACCA GATCGAAGCGGCCGT 77 318 ST40_RS26960 NONE ST40_RS00295 53888 .. 53914 - -4.3 -2.69471 GGAGTGCGATATAAC GGGGATCCGCA AACTG TGCAACCCCCC TTTTTCACCGAACTG 44 97 ST40_RS00290 53652 .. 53670 - -14.6 -4.05788 CTTCTTTAAACCAAA TGAGCGCC AAA GGCGCTCA CGTTTGACTGGATTG 100 117 ykgO 53318 .. 53352 - -12.9 -5.19879 GGGCAAACACAAAAA TCCGCATCCGACGAT TATGG ATCGTTGGATGCGGC GGTCAATCCGGGAAT 100 160 ST40_RS00280 NONE ST40_RS26950 NONE ST40_RS28985 NONE ST40_RS00275 NONE ST40_RS26945 NONE ST40_RS28980 NONE traG 49454 .. 49469 - -3.2 -5.252 CATTTGGACAAAAAA TCCGGA CGGT TCGGGA AACAAGTCTGGGCGA 84 107 ST40_RS00260 48363 .. 48374 - -5.8 -2.70932 GCCCGGCCTTAAGCA GCGT CGCT ACGC GACTTGAAATGCTGG 50 7 ST40_RS00255 NONE ST40_RS28955 NONE ST40_RS00250 47544 .. 47563 - -13.6 -5.86965 ATTGAGCAAAAAAAA GAGCGGCT TTTC AGCCGCTC TTTTTTCTTGTCGTG 100 62 ST40_RS26905 NONE ST40_RS26900 NONE ST40_RS00235 NONE ST40_RS28935 NONE ST40_RS26895 NONE ST40_RS00230 NONE ST40_RS26890 40010 .. 40032 - -3.3 -4.26344 ATACTCGCATGAAAA CACTCCGTT GGTTG AACGGCGAG CAGTCTTGCGGCAAT 62 158 ST40_RS00220 NONE ST40_RS26880 NONE ST40_RS00215 NONE ST40_RS00210 NONE ST40_RS26875 37048 .. 37078 - -13.4 -4.89477 GGTCCAAGAACAAAA GGAAAAGGCGCGG ATCTGA CCGCGCC-TTTCC AAAAACAGATGTGTT 100 76 ST40_RS00205 NONE ST40_RS26870 NONE ST40_RS28905 NONE ST40_RS28900 NONE ST40_RS26865 35089 .. 35104 - -3.2 -4.59773 GGTCACTTTGAAAAA CCGTCT GAAA AGAAGG CGCGTGAAAAGGCTG 70 149 ST40_RS00190 33111 .. 33131 - -11.1 -4.86773 GAAAAGCACTAAAAA GCCCCGG ACACGAG CCGGGGC TTTCTGGTTTTGACG 100 68 ST40_RS00170 30542 .. 30560 - -17.4 -5.45802 GGCTGAAAACAAAAA CGCCGCGC AAT GCGCGGCG TTCAATCTCAGTGGA 100 49 ST40_RS26835 NONE ST40_RS26830 NONE ST40_RS28875 NONE ST40_RS26825 NONE ST40_RS00155 NONE ST40_RS00150 NONE ST40_RS28870 24620 .. 24644 - -2.1 -4.35524 TGCGGAAAGCGAAAA CCTGGTCCAG CAAGCC CTCGACC-GG CTGATGGAGGACCGG 63 12 ST40_RS28865 NONE ST40_RS28860 23656 .. 23685 - -6.3 -2.78384 GCTTTGCCCAGGATA CCCTTGCTGAGGC ATCA GCCTATGCAAGCG AGATGTTGGGCTCGG 50 58 ST40_RS28855 NONE rpmE 22433 .. 22463 - -20.6 -3.06696 GCGGGCCTCAACACA CAAAAAACCCGGCC AGA GGCCGGGTTTTTCG TTTGAAACTGTCGTG 100 49 ST40_RS28850 NONE nhaA NONE ST40_RS00125 NONE ST40_RS26795 NONE ST40_RS00120 NONE ST40_RS26790 NONE ST40_RS28835 NONE ST40_RS28830 NONE ST40_RS00115 17666 .. 17705 - -9.9 -2.90075 TCTGCTCGAACGATA CGGGGCGCCATTTTCCGG CAGAT CCTGCCA-TGGCGCCCCG CGTTCGGTGTCGTGA 65 42 ST40_RS28825 NONE ST40_RS29740 NONE ST40_RS26775 NONE ST40_RS00105 NONE ST40_RS28820 NONE ST40_RS28815 13914 .. 13939 - -4 -3.06694 ACCCAGCTGGAAAAC CTGCTC-GACG ACGAA CGTCAGATCAG CCAGGACGCCCTTGC 45 54 ST40_RS28810 12931 .. 12947 - -4.4 -3.72576 TGCGTCTTGAGGAAA GCCGCGA GATG TCGCG-C TACCTCACAGGCCTC 57 156 ST40_RS26755 NONE ST40_RS28805 NONE ST40_RS26750 NONE ST40_RS28800 10848 .. 10869 - -5.1 -4.10672 TCAACGGAAACGAAA TAAAGCCCG GTAA CGTGCTTCA GCACCAGGACACGCT 65 121 ST40_RS28795 10035 .. 10061 - -9.4 -2.57132 TCTGCGCTCTACAAT CTCGCCCTGCTC TAC GAGGAAGGCGAA GGCCGCCCCTTCGAC 59 462 ST40_RS28785 NONE ST40_RS28780 NONE ST40_RS26735 NONE ST40_RS00015 NONE mprF NONE ST40_RS00010 149 .. 163 - -4.2 -2.72344 GGGCAGCCGCAAGTA CCGCAT ATA ATCCGG TGCGACGGCAATTAC 0 116