locus-tag class description RD1_RS00010 PF01571 Aminomethyltransferase folate-binding domain RD1_RS00010 PF08669 Glycine cleavage T-protein C-terminal barrel domain RD1_RS00020 PF00111 2Fe-2S iron-sulfur cluster binding domain RD1_RS00020 PF00175 Oxidoreductase NAD-binding domain RD1_RS00020 PF00970 Oxidoreductase FAD-binding domain RD1_RS00045 PF01571 Aminomethyltransferase folate-binding domain RD1_RS00045 PF07992 Pyridine nucleotide-disulphide oxidoreductase RD1_RS00045 PF17806 Sarcosine oxidase A3 domain RD1_RS00045 PF08669 Glycine cleavage T-protein C-terminal barrel domain RD1_RS00050 PF04267 Sarcosine oxidase, delta subunit family RD1_RS00055 PF01266 FAD dependent oxidoreductase RD1_RS00065 PF00571 CBS domain RD1_RS00065 PF00005 ABC transporter RD1_RS00070 PF00528 Binding-protein-dependent transport system inner membrane component RD1_RS00075 PF00849 RNA pseudouridylate synthase RD1_RS00080 PF01571 Aminomethyltransferase folate-binding domain RD1_RS00080 PF01266 FAD dependent oxidoreductase RD1_RS00080 PF16350 FAD dependent oxidoreductase central domain RD1_RS00080 PF08669 Glycine cleavage T-protein C-terminal barrel domain RD1_RS00090 PF01266 FAD dependent oxidoreductase RD1_RS00090 PF08669 Glycine cleavage T-protein C-terminal barrel domain RD1_RS00090 PF01571 Aminomethyltransferase folate-binding domain RD1_RS00090 PF16350 FAD dependent oxidoreductase central domain RD1_RS00105 PF13185 GAF domain RD1_RS00110 PF02803 Thiolase, C-terminal domain RD1_RS00110 PF00108 Thiolase, N-terminal domain RD1_RS00120 PF12282 Signal transduction histidine kinase RD1_RS00120 PF07568 Histidine kinase RD1_RS00120 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RD1_RS00150 PF13491 4TM region of DNA translocase FtsK/SpoIIIE RD1_RS00150 PF01580 FtsK/SpoIIIE family RD1_RS00150 PF17854 FtsK alpha domain RD1_RS00150 PF09397 Ftsk gamma domain RD1_RS00155 PF00155 Aminotransferase class I and II RD1_RS00160 PF01425 Amidase RD1_RS00165 PF01494 FAD binding domain RD1_RS00170 PF03966 Trm112p-like protein RD1_RS00175 PF02190 ATP-dependent protease La (LON) substrate-binding domain RD1_RS00175 PF05362 Lon protease (S16) C-terminal proteolytic domain RD1_RS00175 PF00004 ATPase family associated with various cellular activities (AAA) RD1_RS00180 PF00085 Thioredoxin RD1_RS00185 PF03372 Endonuclease/Exonuclease/phosphatase family RD1_RS00190 PF00072 Response regulator receiver domain RD1_RS00190 PF00486 Transcriptional regulatory protein, C terminal RD1_RS00195 PF00925 GTP cyclohydrolase II RD1_RS00205 PF01168 Alanine racemase, N-terminal domain RD1_RS00220 PF09334 tRNA synthetases class I (M) RD1_RS00220 PF13603 Leucyl-tRNA synthetase, Domain 2 RD1_RS00220 PF00133 tRNA synthetases class I (I, L, M and V) RD1_RS00220 PF08264 Anticodon-binding domain of tRNA RD1_RS00235 PF14497 Glutathione S-transferase, C-terminal domain RD1_RS00235 PF02798 Glutathione S-transferase, N-terminal domain RD1_RS00245 PF00924 Mechanosensitive ion channel RD1_RS00245 PF12795 Mechanosensitive ion channel porin domain RD1_RS00245 PF12794 Mechanosensitive ion channel inner membrane domain 1 RD1_RS00250 PF05378 Hydantoinase/oxoprolinase N-terminal region RD1_RS00250 PF01968 Hydantoinase/oxoprolinase RD1_RS00255 PF08331 Domain of unknown function (DUF1730) RD1_RS00260 PF00043 Glutathione S-transferase, C-terminal domain RD1_RS00260 PF13417 Glutathione S-transferase, N-terminal domain RD1_RS00265 PF00912 Transglycosylase RD1_RS00270 PF01493 GXGXG motif RD1_RS00270 PF04898 Glutamate synthase central domain RD1_RS00270 PF00310 Glutamine amidotransferases class-II RD1_RS00270 PF01645 Conserved region in glutamate synthase RD1_RS00285 PF07992 Pyridine nucleotide-disulphide oxidoreductase RD1_RS00285 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster RD1_RS00290 PF02673 Bacitracin resistance protein BacA RD1_RS00320 PF02589 LUD domain RD1_RS00325 PF11870 Domain of unknown function (DUF3390) RD1_RS00325 PF13183 4Fe-4S dicluster domain RD1_RS00325 PF02589 LUD domain RD1_RS00330 PF02754 Cysteine-rich domain RD1_RS00335 PF09330 D-lactate dehydrogenase, membrane binding RD1_RS00335 PF01565 FAD binding domain RD1_RS00345 PF04403 Paraquat-inducible protein A RD1_RS00350 PF02470 MlaD protein RD1_RS00360 PF00155 Aminotransferase class I and II RD1_RS00375 PF01645 Conserved region in glutamate synthase RD1_RS00380 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RD1_RS00380 PF12282 Signal transduction histidine kinase RD1_RS00380 PF07568 Histidine kinase RD1_RS00385 PF08281 Sigma-70, region 4 RD1_RS00385 PF04542 Sigma-70 region 2 RD1_RS00390 PF00072 Response regulator receiver domain RD1_RS00395 PF03631 Virulence factor BrkB RD1_RS00405 PF01546 Peptidase family M20/M25/M40 RD1_RS00405 PF07687 Peptidase dimerisation domain RD1_RS00410 PF02569 Pantoate-beta-alanine ligase RD1_RS00415 PF02548 Ketopantoate hydroxymethyltransferase RD1_RS00430 PF00850 Histone deacetylase domain RD1_RS00445 PF07883 Cupin domain RD1_RS00450 PF03576 Peptidase family S58 RD1_RS00455 PF02779 Transketolase, pyrimidine binding domain RD1_RS00455 PF02780 Transketolase, C-terminal domain RD1_RS00455 PF13292 1-deoxy-D-xylulose-5-phosphate synthase RD1_RS00460 PF02276 Photosynthetic reaction centre cytochrome C subunit RD1_RS00465 PF00124 Photosynthetic reaction centre protein RD1_RS00470 PF00124 Photosynthetic reaction centre protein RD1_RS00475 PF00556 Antenna complex alpha/beta subunit RD1_RS00480 PF00556 Antenna complex alpha/beta subunit RD1_RS00485 PF05398 PufQ cytochrome subunit RD1_RS00490 PF00148 Nitrogenase component 1 type Oxidoreductase RD1_RS00490 PF08369 Proto-chlorophyllide reductase 57 kD subunit RD1_RS00495 PF00148 Nitrogenase component 1 type Oxidoreductase RD1_RS00500 PF00142 4Fe-4S iron sulfur cluster binding proteins, NifH/frxC family RD1_RS00505 PF08240 Alcohol dehydrogenase GroES-like domain RD1_RS00510 PF00891 O-methyltransferase domain RD1_RS00510 PF16864 Dimerisation domain RD1_RS00515 PF00348 Polyprenyl synthetase RD1_RS00520 PF01593 Flavin containing amine oxidoreductase RD1_RS00535 PF03073 TspO/MBR family RD1_RS00545 PF01593 Flavin containing amine oxidoreductase RD1_RS00555 PF01078 Magnesium chelatase, subunit ChlI RD1_RS00555 PF17863 AAA lid domain RD1_RS00560 PF17863 AAA lid domain RD1_RS00565 PF00561 alpha/beta hydrolase fold RD1_RS00580 PF00155 Aminotransferase class I and II RD1_RS00585 PF12291 Protein of unknown function (DUF3623) RD1_RS00590 PF02915 Rubrerythrin RD1_RS00605 PF03703 Bacterial PH domain RD1_RS00610 PF03967 Photosynthetic reaction centre, H-chain N-terminal region RD1_RS00610 PF05239 PRC-barrel domain RD1_RS00615 PF03209 PUCC protein RD1_RS00620 PF07109 Magnesium-protoporphyrin IX methyltransferase C-terminus RD1_RS00620 PF05175 Methyltransferase small domain RD1_RS00625 PF00142 4Fe-4S iron sulfur cluster binding proteins, NifH/frxC family RD1_RS00630 PF02514 CobN/Magnesium Chelatase RD1_RS00630 PF11965 Domain of unknown function (DUF3479) RD1_RS00635 PF08369 Proto-chlorophyllide reductase 57 kD subunit RD1_RS00635 PF00148 Nitrogenase component 1 type Oxidoreductase RD1_RS00640 PF00148 Nitrogenase component 1 type Oxidoreductase RD1_RS00645 PF07284 2-vinyl bacteriochlorophyllide hydratase (BCHF) RD1_RS00655 PF13426 PAS domain RD1_RS00655 PF13188 PAS domain RD1_RS00655 PF02954 Bacterial regulatory protein, Fis family RD1_RS00660 PF01040 UbiA prenyltransferase family RD1_RS00665 PF03209 PUCC protein RD1_RS00675 PF00293 NUDIX domain RD1_RS00685 PF00771 FHIPEP family RD1_RS00695 PF01312 FlhB HrpN YscU SpaS Family RD1_RS00710 PF01527 Transposase RD1_RS00720 PF01527 Transposase RD1_RS00725 PF13683 Integrase core domain RD1_RS00725 PF13276 HTH-like domain RD1_RS00735 PF07378 Flagellar protein FlbT RD1_RS00745 PF00700 Bacterial flagellin C-terminal helical region RD1_RS00745 PF00669 Bacterial flagellin N-terminal helical region RD1_RS00765 PF13861 FlgD Tudor-like domain RD1_RS00765 PF13860 FlgD Ig-like domain RD1_RS00765 PF03963 Flagellar hook capping protein - N-terminal region RD1_RS00770 PF01266 FAD dependent oxidoreductase RD1_RS00775 PF00528 Binding-protein-dependent transport system inner membrane component RD1_RS00780 PF00528 Binding-protein-dependent transport system inner membrane component RD1_RS00785 PF00005 ABC transporter RD1_RS00785 PF08402 TOBE domain RD1_RS00790 PF13416 Bacterial extracellular solute-binding protein RD1_RS00800 PF00202 Aminotransferase class-III RD1_RS00805 PF00005 ABC transporter RD1_RS00805 PF08402 TOBE domain RD1_RS00820 PF00528 Binding-protein-dependent transport system inner membrane component RD1_RS00825 PF00528 Binding-protein-dependent transport system inner membrane component RD1_RS00830 PF13406 Transglycosylase SLT domain RD1_RS00835 PF17171 Glutathione S-transferase, C-terminal domain RD1_RS00835 PF17172 Glutathione S-transferase N-terminal domain RD1_RS00840 PF08461 Ribonuclease R winged-helix domain RD1_RS00840 PF08206 Ribonuclease B OB domain RD1_RS00840 PF17876 Cold shock domain RD1_RS00840 PF00575 S1 RNA binding domain RD1_RS00840 PF00773 RNB domain RD1_RS00850 PF07687 Peptidase dimerisation domain RD1_RS00850 PF01546 Peptidase family M20/M25/M40 RD1_RS00865 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal RD1_RS00865 PF00132 Bacterial transferase hexapeptide (six repeats) RD1_RS00865 PF14602 Hexapeptide repeat of succinyl-transferase RD1_RS00880 PF04055 Radical SAM superfamily RD1_RS00900 PF00266 Aminotransferase class-V RD1_RS00905 PF01842 ACT domain RD1_RS00905 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain RD1_RS00905 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain RD1_RS00910 PF00107 Zinc-binding dehydrogenase RD1_RS00910 PF08240 Alcohol dehydrogenase GroES-like domain RD1_RS00915 PF00155 Aminotransferase class I and II RD1_RS00920 PF01381 Helix-turn-helix RD1_RS00920 PF07883 Cupin domain RD1_RS00925 PF00108 Thiolase, N-terminal domain RD1_RS00925 PF02803 Thiolase, C-terminal domain RD1_RS00930 PF03109 ABC1 family RD1_RS00935 PF01209 ubiE/COQ5 methyltransferase family RD1_RS00940 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain RD1_RS00940 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain RD1_RS00945 PF00378 Enoyl-CoA hydratase/isomerase RD1_RS00955 PF01649 Ribosomal protein S20 RD1_RS00960 PF00308 Bacterial dnaA protein RD1_RS00960 PF08299 Bacterial dnaA protein helix-turn-helix RD1_RS00960 PF11638 DnaA N-terminal domain RD1_RS00965 PF02767 DNA polymerase III beta subunit, central domain RD1_RS00965 PF00712 DNA polymerase III beta subunit, N-terminal domain RD1_RS00965 PF02768 DNA polymerase III beta subunit, C-terminal domain RD1_RS00970 PF02463 RecF/RecN/SMC N terminal domain RD1_RS00980 PF00204 DNA gyrase B RD1_RS00980 PF01751 Toprim domain RD1_RS00980 PF00986 DNA gyrase B subunit, carboxyl terminus RD1_RS00980 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RD1_RS01000 PF03167 Uracil DNA glycosylase superfamily RD1_RS01005 PF01408 Oxidoreductase family, NAD-binding Rossmann fold RD1_RS01005 PF02894 Oxidoreductase family, C-terminal alpha/beta domain RD1_RS01010 PF01116 Fructose-bisphosphate aldolase class-II RD1_RS01020 PF00294 pfkB family carbohydrate kinase RD1_RS01025 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain RD1_RS01025 PF00205 Thiamine pyrophosphate enzyme, central domain RD1_RS01025 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain RD1_RS01030 PF02894 Oxidoreductase family, C-terminal alpha/beta domain RD1_RS01030 PF01408 Oxidoreductase family, NAD-binding Rossmann fold RD1_RS01035 PF01261 Xylose isomerase-like TIM barrel RD1_RS01040 PF01408 Oxidoreductase family, NAD-binding Rossmann fold RD1_RS01040 PF02894 Oxidoreductase family, C-terminal alpha/beta domain RD1_RS01050 PF00694 Aconitase C-terminal domain RD1_RS01060 PF00180 Isocitrate/isopropylmalate dehydrogenase RD1_RS01065 PF00892 EamA-like transporter family RD1_RS01070 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle RD1_RS01085 PF00356 Bacterial regulatory proteins, lacI family RD1_RS01085 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family RD1_RS01090 PF06224 Winged helix DNA-binding domain RD1_RS01105 PF01266 FAD dependent oxidoreductase RD1_RS01110 PF03480 Bacterial extracellular solute-binding protein, family 7 RD1_RS01120 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component RD1_RS01120 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component RD1_RS01140 PF03746 LamB/YcsF family RD1_RS01145 PF00111 2Fe-2S iron-sulfur cluster binding domain RD1_RS01145 PF01799 [2Fe-2S] binding domain RD1_RS01150 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase RD1_RS01160 PF12833 Helix-turn-helix domain RD1_RS01160 PF02311 AraC-like ligand binding domain RD1_RS01165 PF02771 Acyl-CoA dehydrogenase, N-terminal domain RD1_RS01165 PF02770 Acyl-CoA dehydrogenase, middle domain RD1_RS01165 PF00441 Acyl-CoA dehydrogenase, C-terminal domain RD1_RS01170 PF18269 T3SS EscN ATPase C-terminal domain RD1_RS01170 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain RD1_RS01170 PF02874 ATP synthase alpha/beta family, beta-barrel domain RD1_RS01180 PF06429 Flagellar basal body rod FlgEFG protein C-terminal RD1_RS01185 PF02049 Flagellar hook-basal body complex protein FliE RD1_RS01190 PF01313 Bacterial export proteins, family 3 RD1_RS01195 PF00460 Flagella basal body rod protein RD1_RS01195 PF06429 Flagellar basal body rod FlgEFG protein C-terminal RD1_RS01200 PF00460 Flagella basal body rod protein RD1_RS01200 PF06429 Flagellar basal body rod FlgEFG protein C-terminal RD1_RS01210 PF02107 Flagellar L-ring protein RD1_RS01225 PF01527 Transposase RD1_RS01230 PF13683 Integrase core domain RD1_RS01230 PF13276 HTH-like domain RD1_RS01235 PF00813 FliP family RD1_RS01240 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term RD1_RS01255 PF03748 Flagellar basal body-associated protein FliL RD1_RS01270 PF01618 MotA/TolQ/ExbB proton channel family RD1_RS01285 PF00005 ABC transporter RD1_RS01285 PF08402 TOBE domain RD1_RS01290 PF00528 Binding-protein-dependent transport system inner membrane component RD1_RS01295 PF00528 Binding-protein-dependent transport system inner membrane component RD1_RS01320 PF13454 FAD-NAD(P)-binding RD1_RS01335 PF00378 Enoyl-CoA hydratase/isomerase RD1_RS01350 PF01523 Putative modulator of DNA gyrase RD1_RS01355 PF00459 Inositol monophosphatase family RD1_RS01365 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) RD1_RS01370 PF02606 Tetraacyldisaccharide-1-P 4'-kinase RD1_RS01385 PF00730 HhH-GPD superfamily base excision DNA repair protein RD1_RS01385 PF14815 NUDIX domain RD1_RS01390 PF18755 Restriction Enzyme Adenine Methylase Associated RD1_RS01390 PF01555 DNA methylase RD1_RS01395 PF01351 Ribonuclease HII RD1_RS01415 PF03328 HpcH/HpaI aldolase/citrate lyase family RD1_RS01425 PF01118 Semialdehyde dehydrogenase, NAD binding domain RD1_RS01425 PF02774 Semialdehyde dehydrogenase, dimerisation domain RD1_RS01435 PF03009 Glycerophosphoryl diester phosphodiesterase family RD1_RS01455 PF00484 Carbonic anhydrase RD1_RS01465 PF02789 Cytosol aminopeptidase family, N-terminal domain RD1_RS01465 PF00883 Cytosol aminopeptidase family, catalytic domain RD1_RS01470 PF00877 NlpC/P60 family RD1_RS01470 PF18348 Bacterial dipeptidyl-peptidase Sh3 domain RD1_RS01485 PF00440 Bacterial regulatory proteins, tetR family RD1_RS01485 PF18665 Tetracyclin repressor-like, C-terminal domain RD1_RS01490 PF03547 Membrane transport protein RD1_RS01495 PF00756 Putative esterase RD1_RS01500 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 RD1_RS01510 PF02423 Ornithine cyclodeaminase/mu-crystallin family RD1_RS01515 PF00561 alpha/beta hydrolase fold RD1_RS01525 PF03969 AFG1-like ATPase RD1_RS01530 PF08245 Mur ligase middle domain RD1_RS01530 PF02875 Mur ligase family, glutamate ligase domain RD1_RS01535 PF01039 Carboxyl transferase domain RD1_RS01535 PF17848 Acetyl-coA carboxylase zinc finger domain RD1_RS01550 PF00920 Dehydratase family RD1_RS01555 PF03572 Peptidase family S41 RD1_RS01555 PF13180 PDZ domain RD1_RS01565 PF01676 Metalloenzyme superfamily RD1_RS01565 PF06415 BPG-independent PGAM N-terminus (iPGM_N) RD1_RS01570 PF01336 OB-fold nucleic acid binding domain RD1_RS01570 PF02811 PHP domain RD1_RS01570 PF14579 Helix-hairpin-helix motif RD1_RS01570 PF17657 Bacterial DNA polymerase III alpha subunit finger domain RD1_RS01570 PF07733 Bacterial DNA polymerase III alpha NTPase domain RD1_RS01610 PF10124 Mu-like prophage major head subunit gpT RD1_RS01635 PF01367 5'-3' exonuclease, C-terminal SAM fold RD1_RS01635 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain RD1_RS01635 PF00476 DNA polymerase family A RD1_RS01635 PF01612 3'-5' exonuclease RD1_RS01640 PF01261 Xylose isomerase-like TIM barrel RD1_RS01650 PF07726 ATPase family associated with various cellular activities (AAA) RD1_RS01650 PF17863 AAA lid domain RD1_RS01670 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) RD1_RS01670 PF01627 Hpt domain RD1_RS01670 PF00672 HAMP domain RD1_RS01670 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RD1_RS01670 PF00512 His Kinase A (phospho-acceptor) domain RD1_RS01670 PF00072 Response regulator receiver domain RD1_RS01675 PF03883 Peroxide stress protein YaaA RD1_RS01680 PF16124 RecQ zinc-binding RD1_RS01680 PF00570 HRDC domain RD1_RS01680 PF00271 Helicase conserved C-terminal domain RD1_RS01680 PF09382 RQC domain RD1_RS01680 PF00270 DEAD/DEAH box helicase RD1_RS01685 PF02325 YGGT family RD1_RS01690 PF11700 Vacuole effluxer Atg22 like RD1_RS01695 PF03411 Penicillin-insensitive murein endopeptidase RD1_RS01705 PF02592 Putative vitamin uptake transporter RD1_RS01710 PF00472 RF-1 domain RD1_RS01715 PF00570 HRDC domain RD1_RS01715 PF01612 3'-5' exonuclease RD1_RS01720 PF01380 SIS domain RD1_RS01720 PF00571 CBS domain RD1_RS01735 PF00005 ABC transporter RD1_RS01740 PF16321 Sigma 54 modulation/S30EA ribosomal protein C terminus RD1_RS01740 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein RD1_RS01745 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 RD1_RS01750 PF00483 Nucleotidyl transferase RD1_RS01755 PF02348 Cytidylyltransferase RD1_RS01760 PF00459 Inositol monophosphatase family RD1_RS01765 PF13532 2OG-Fe(II) oxygenase superfamily RD1_RS01770 PF00012 Hsp70 protein RD1_RS01775 PF01556 DnaJ C terminal domain RD1_RS01775 PF00226 DnaJ domain RD1_RS01775 PF00684 DnaJ central domain RD1_RS01780 PF07516 SecA Wing and Scaffold domain RD1_RS01780 PF01043 SecA preprotein cross-linking domain RD1_RS01780 PF07517 SecA DEAD-like domain RD1_RS01780 PF02810 SEC-C motif RD1_RS01790 PF01960 ArgJ family RD1_RS01795 PF00293 NUDIX domain RD1_RS01800 PF00009 Elongation factor Tu GTP binding domain RD1_RS01800 PF11987 Translation-initiation factor 2 RD1_RS01800 PF08364 Bacterial translation initiation factor IF-2 associated region RD1_RS01800 PF04760 Translation initiation factor IF-2, N-terminal region RD1_RS01810 PF13184 NusA-like KH domain RD1_RS01810 PF00575 S1 RNA binding domain RD1_RS01810 PF08529 NusA N-terminal domain RD1_RS01815 PF17384 RimP C-terminal SH3 domain RD1_RS01815 PF02576 RimP N-terminal domain RD1_RS01825 PF00561 alpha/beta hydrolase fold RD1_RS01840 PF00795 Carbon-nitrogen hydrolase RD1_RS01845 PF00462 Glutaredoxin RD1_RS01855 PF08241 Methyltransferase domain RD1_RS01860 PF00762 Ferrochelatase RD1_RS01870 PF03734 L,D-transpeptidase catalytic domain RD1_RS01880 PF03734 L,D-transpeptidase catalytic domain RD1_RS01890 PF05958 tRNA (Uracil-5-)-methyltransferase RD1_RS01895 PF00005 ABC transporter RD1_RS01895 PF00664 ABC transporter transmembrane region RD1_RS01900 PF00664 ABC transporter transmembrane region RD1_RS01900 PF00005 ABC transporter RD1_RS01905 PF12627 Probable RNA and SrmB- binding site of polymerase A RD1_RS01905 PF13735 tRNA nucleotidyltransferase domain 2 putative RD1_RS01905 PF01743 Poly A polymerase head domain RD1_RS01910 PF00293 NUDIX domain RD1_RS01915 PF01430 Hsp33 protein RD1_RS01920 PF00293 NUDIX domain RD1_RS01925 PF00512 His Kinase A (phospho-acceptor) domain RD1_RS01925 PF12833 Helix-turn-helix domain RD1_RS01925 PF07494 Two component regulator propeller RD1_RS01925 PF00072 Response regulator receiver domain RD1_RS01925 PF07495 Y_Y_Y domain RD1_RS01925 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RD1_RS01940 PF00585 C-terminal regulatory domain of Threonine dehydratase RD1_RS01940 PF00291 Pyridoxal-phosphate dependent enzyme RD1_RS01945 PF00764 Arginosuccinate synthase RD1_RS01955 PF01625 Peptide methionine sulfoxide reductase RD1_RS01960 PF00294 pfkB family carbohydrate kinase RD1_RS01965 PF03949 Malic enzyme, NAD binding domain RD1_RS01965 PF01515 Phosphate acetyl/butaryl transferase RD1_RS01965 PF00390 Malic enzyme, N-terminal domain RD1_RS01970 PF00488 MutS domain V RD1_RS01970 PF05190 MutS family domain IV RD1_RS01970 PF05192 MutS domain III RD1_RS01970 PF01624 MutS domain I RD1_RS01970 PF05188 MutS domain II RD1_RS01975 PF01025 GrpE RD1_RS01980 PF01628 HrcA protein C terminal domain RD1_RS01985 PF03725 3' exoribonuclease family, domain 2 RD1_RS01985 PF01138 3' exoribonuclease family, domain 1 RD1_RS01990 PF01725 Ham1 family RD1_RS01995 PF06969 HemN C-terminal domain RD1_RS01995 PF04055 Radical SAM superfamily RD1_RS02000 PF17762 HTH domain found in ParB protein RD1_RS02000 PF02195 ParB-like nuclease domain RD1_RS02005 PF13614 AAA domain RD1_RS02010 PF02527 rRNA small subunit methyltransferase G RD1_RS02015 PF01134 Glucose inhibited division protein A RD1_RS02015 PF13932 GidA associated domain RD1_RS02020 PF10396 GTP-binding protein TrmE N-terminus RD1_RS02020 PF01926 50S ribosome-binding GTPase RD1_RS02020 PF12631 MnmE helical domain RD1_RS02025 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain RD1_RS02025 PF07498 Rho termination factor, N-terminal domain RD1_RS02025 PF07497 Rho termination factor, RNA-binding domain RD1_RS02030 PF03653 Uncharacterised protein family (UPF0093) RD1_RS02035 PF02545 Maf-like protein RD1_RS02040 PF01488 Shikimate / quinate 5-dehydrogenase RD1_RS02040 PF08501 Shikimate dehydrogenase substrate binding domain RD1_RS02040 PF18317 Shikimate 5'-dehydrogenase C-terminal domain RD1_RS02045 PF01121 Dephospho-CoA kinase RD1_RS02050 PF00929 Exonuclease RD1_RS02055 PF02556 Preprotein translocase subunit SecB RD1_RS02060 PF04186 FxsA cytoplasmic membrane protein RD1_RS02080 PF07724 AAA domain (Cdc48 subfamily) RD1_RS02080 PF00004 ATPase family associated with various cellular activities (AAA) RD1_RS02090 PF00227 Proteasome subunit RD1_RS02095 PF00085 Thioredoxin RD1_RS02100 PF12705 PD-(D/E)XK nuclease superfamily RD1_RS02100 PF00580 UvrD/REP helicase N-terminal domain RD1_RS02100 PF13361 UvrD-like helicase C-terminal domain RD1_RS02110 PF12804 MobA-like NTP transferase domain RD1_RS02115 PF01636 Phosphotransferase enzyme family RD1_RS02120 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE RD1_RS02135 PF02630 SCO1/SenC RD1_RS02140 PF00072 Response regulator receiver domain RD1_RS02145 PF01966 HD domain RD1_RS02155 PF05221 S-adenosyl-L-homocysteine hydrolase RD1_RS02155 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain RD1_RS02170 PF03795 YCII-related domain RD1_RS02175 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus RD1_RS02175 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus RD1_RS02180 PF00814 Glycoprotease family RD1_RS02210 PF00378 Enoyl-CoA hydratase/isomerase RD1_RS02235 PF09722 Protein of unknown function (DUF2384) RD1_RS02245 PF04962 KduI/IolB family RD1_RS02250 PF00005 ABC transporter RD1_RS02255 PF02653 Branched-chain amino acid transport system / permease component RD1_RS02265 PF00356 Bacterial regulatory proteins, lacI family RD1_RS02295 PF02469 Fasciclin domain RD1_RS02340 PF02770 Acyl-CoA dehydrogenase, middle domain RD1_RS02340 PF02771 Acyl-CoA dehydrogenase, N-terminal domain RD1_RS02340 PF00441 Acyl-CoA dehydrogenase, C-terminal domain RD1_RS02345 PF00248 Aldo/keto reductase family RD1_RS02360 PF00378 Enoyl-CoA hydratase/isomerase RD1_RS02365 PF01144 Coenzyme A transferase RD1_RS02370 PF00248 Aldo/keto reductase family RD1_RS02375 PF05199 GMC oxidoreductase RD1_RS02375 PF00732 GMC oxidoreductase RD1_RS02385 PF08240 Alcohol dehydrogenase GroES-like domain RD1_RS02385 PF00107 Zinc-binding dehydrogenase RD1_RS02390 PF00440 Bacterial regulatory proteins, tetR family RD1_RS02390 PF17938 Tetracyclin repressor-like, C-terminal domain RD1_RS02395 PF17912 MalK OB fold domain RD1_RS02395 PF00005 ABC transporter RD1_RS02400 PF00528 Binding-protein-dependent transport system inner membrane component RD1_RS02405 PF00528 Binding-protein-dependent transport system inner membrane component RD1_RS02410 PF01547 Bacterial extracellular solute-binding protein RD1_RS02440 PF01882 Protein of unknown function DUF58 RD1_RS02445 PF07726 ATPase family associated with various cellular activities (AAA) RD1_RS02445 PF17863 AAA lid domain RD1_RS02455 PF00884 Sulfatase RD1_RS02455 PF16385 Domain of unknown function RD1_RS02465 PF00753 Metallo-beta-lactamase superfamily RD1_RS02475 PF01593 Flavin containing amine oxidoreductase RD1_RS02485 PF02633 Creatinine amidohydrolase RD1_RS02505 PF02653 Branched-chain amino acid transport system / permease component RD1_RS02515 PF00005 ABC transporter RD1_RS02520 PF00005 ABC transporter RD1_RS02525 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily RD1_RS02530 PF13193 AMP-binding enzyme C-terminal domain RD1_RS02530 PF00501 AMP-binding enzyme RD1_RS02540 PF02780 Transketolase, C-terminal domain RD1_RS02540 PF02779 Transketolase, pyrimidine binding domain RD1_RS02540 PF13292 1-deoxy-D-xylulose-5-phosphate synthase RD1_RS02545 PF00348 Polyprenyl synthetase RD1_RS02550 PF02609 Exonuclease VII small subunit RD1_RS02555 PF00486 Transcriptional regulatory protein, C terminal RD1_RS02555 PF00072 Response regulator receiver domain RD1_RS02560 PF12802 MarR family RD1_RS02565 PF01063 Amino-transferase class IV RD1_RS02575 PF00892 EamA-like transporter family RD1_RS02580 PF01264 Chorismate synthase RD1_RS02590 PF00528 Binding-protein-dependent transport system inner membrane component RD1_RS02595 PF00005 ABC transporter RD1_RS02600 PF00885 6,7-dimethyl-8-ribityllumazine synthase RD1_RS02605 PF04299 Putative FMN-binding domain RD1_RS02615 PF00355 Rieske [2Fe-2S] domain RD1_RS02615 PF10399 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal RD1_RS02620 PF00033 Cytochrome b/b6/petB RD1_RS02620 PF00032 Cytochrome b(C-terminal)/b6/petD RD1_RS02625 PF02167 Cytochrome C1 family RD1_RS02630 PF07690 Major Facilitator Superfamily RD1_RS02640 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family RD1_RS02655 PF08889 WbqC-like protein family RD1_RS02675 PF02119 Flagellar P-ring protein RD1_RS02690 PF06429 Flagellar basal body rod FlgEFG protein C-terminal RD1_RS02690 PF07559 Flagellar basal body protein FlaE RD1_RS02690 PF00460 Flagella basal body rod protein RD1_RS02700 PF17773 UPF0176 acylphosphatase like domain RD1_RS02700 PF00581 Rhodanese-like domain RD1_RS02705 PF00857 Isochorismatase family RD1_RS02710 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain RD1_RS02710 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family RD1_RS02720 PF13533 Biotin-lipoyl like RD1_RS02725 PF00005 ABC transporter RD1_RS02725 PF00664 ABC transporter transmembrane region RD1_RS02730 PF00664 ABC transporter transmembrane region RD1_RS02730 PF00005 ABC transporter RD1_RS02740 PF01625 Peptide methionine sulfoxide reductase RD1_RS02745 PF01641 SelR domain RD1_RS02750 PF00255 Glutathione peroxidase RD1_RS02770 PF00216 Bacterial DNA-binding protein RD1_RS02775 PF01048 Phosphorylase superfamily RD1_RS02775 PF10423 Bacterial AMP nucleoside phosphorylase N-terminus RD1_RS02780 PF13382 Adenine deaminase C-terminal domain RD1_RS02780 PF01979 Amidohydrolase family RD1_RS02790 PF08669 Glycine cleavage T-protein C-terminal barrel domain RD1_RS02790 PF01571 Aminomethyltransferase folate-binding domain RD1_RS02795 PF01008 Initiation factor 2 subunit family RD1_RS02795 PF00596 Class II Aldolase and Adducin N-terminal domain RD1_RS02805 PF00441 Acyl-CoA dehydrogenase, C-terminal domain RD1_RS02805 PF02770 Acyl-CoA dehydrogenase, middle domain RD1_RS02805 PF02771 Acyl-CoA dehydrogenase, N-terminal domain RD1_RS02815 PF00378 Enoyl-CoA hydratase/isomerase RD1_RS02830 PF00330 Aconitase family (aconitate hydratase) RD1_RS02835 PF12794 Mechanosensitive ion channel inner membrane domain 1 RD1_RS02835 PF00924 Mechanosensitive ion channel RD1_RS02835 PF12795 Mechanosensitive ion channel porin domain RD1_RS02850 PF02590 Predicted SPOUT methyltransferase RD1_RS02870 PF01565 FAD binding domain RD1_RS02870 PF02913 FAD linked oxidases, C-terminal domain RD1_RS02875 PF01565 FAD binding domain RD1_RS02880 PF02754 Cysteine-rich domain RD1_RS02880 PF13183 4Fe-4S dicluster domain RD1_RS02885 PF00089 Trypsin RD1_RS02890 PF00011 Hsp20/alpha crystallin family RD1_RS02910 PF00171 Aldehyde dehydrogenase family RD1_RS02915 PF10417 C-terminal domain of 1-Cys peroxiredoxin RD1_RS02915 PF00578 AhpC/TSA family RD1_RS02930 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain RD1_RS02930 PF00575 S1 RNA binding domain RD1_RS02930 PF03725 3' exoribonuclease family, domain 2 RD1_RS02930 PF01138 3' exoribonuclease family, domain 1 RD1_RS02930 PF00013 KH domain RD1_RS02935 PF01235 Sodium:alanine symporter family RD1_RS02950 PF00312 Ribosomal protein S15 RD1_RS02975 PF01509 TruB family pseudouridylate synthase (N terminal domain) RD1_RS02975 PF16198 tRNA pseudouridylate synthase B C-terminal domain RD1_RS02985 PF02033 Ribosome-binding factor A RD1_RS02990 PF05173 Dihydrodipicolinate reductase, C-terminus RD1_RS02990 PF01113 Dihydrodipicolinate reductase, N-terminus RD1_RS03005 PF01029 NusB family RD1_RS03005 PF01189 16S rRNA methyltransferase RsmB/F RD1_RS03015 PF01808 AICARFT/IMPCHase bienzyme RD1_RS03015 PF02142 MGS-like domain RD1_RS03020 PF01252 Signal peptidase (SPase) II RD1_RS03030 PF05193 Peptidase M16 inactive domain RD1_RS03030 PF00675 Insulinase (Peptidase family M16) RD1_RS03035 PF05193 Peptidase M16 inactive domain RD1_RS03040 PF00171 Aldehyde dehydrogenase family RD1_RS03045 PF01791 DeoC/LacD family aldolase RD1_RS03050 PF08676 MutL C terminal dimerisation domain RD1_RS03050 PF01119 DNA mismatch repair protein, C-terminal domain RD1_RS03055 PF02646 RmuC family RD1_RS03060 PF03786 D-mannonate dehydratase (UxuA) RD1_RS03065 PF02894 Oxidoreductase family, C-terminal alpha/beta domain RD1_RS03065 PF01408 Oxidoreductase family, NAD-binding Rossmann fold RD1_RS03075 PF02894 Oxidoreductase family, C-terminal alpha/beta domain RD1_RS03075 PF01408 Oxidoreductase family, NAD-binding Rossmann fold RD1_RS03080 PF00294 pfkB family carbohydrate kinase RD1_RS03085 PF00892 EamA-like transporter family RD1_RS03090 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase RD1_RS03090 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase RD1_RS03095 PF05721 Phytanoyl-CoA dioxygenase (PhyH) RD1_RS03105 PF08666 SAF domain RD1_RS03105 PF04295 D-galactarate dehydratase / Altronate hydrolase, C terminus RD1_RS03115 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component RD1_RS03125 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain RD1_RS03125 PF13378 Enolase C-terminal domain-like RD1_RS03130 PF03480 Bacterial extracellular solute-binding protein, family 7 RD1_RS03140 PF01370 NAD dependent epimerase/dehydratase family RD1_RS03145 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase RD1_RS03145 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase RD1_RS03155 PF00920 Dehydratase family RD1_RS03160 PF01557 Fumarylacetoacetate (FAA) hydrolase family RD1_RS03165 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain RD1_RS03165 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain RD1_RS03170 PF13378 Enolase C-terminal domain-like RD1_RS03170 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain RD1_RS03175 PF12973 ChrR Cupin-like domain RD1_RS03180 PF04545 Sigma-70, region 4 RD1_RS03180 PF04542 Sigma-70 region 2 RD1_RS03185 PF01593 Flavin containing amine oxidoreductase RD1_RS03215 PF14497 Glutathione S-transferase, C-terminal domain RD1_RS03215 PF02798 Glutathione S-transferase, N-terminal domain RD1_RS03225 PF00501 AMP-binding enzyme RD1_RS03230 PF12399 Branched-chain amino acid ATP-binding cassette transporter RD1_RS03230 PF00005 ABC transporter RD1_RS03235 PF02653 Branched-chain amino acid transport system / permease component RD1_RS03255 PF00005 ABC transporter RD1_RS03260 PF00501 AMP-binding enzyme RD1_RS03260 PF14535 AMP-binding enzyme C-terminal domain RD1_RS03275 PF07885 Ion channel RD1_RS03295 PF00817 impB/mucB/samB family RD1_RS03295 PF11799 impB/mucB/samB family C-terminal domain RD1_RS03300 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family RD1_RS03305 PF10431 C-terminal, D2-small domain, of ClpB protein RD1_RS03305 PF00004 ATPase family associated with various cellular activities (AAA) RD1_RS03305 PF02861 Clp amino terminal domain, pathogenicity island component RD1_RS03305 PF07724 AAA domain (Cdc48 subfamily) RD1_RS03305 PF17871 AAA lid domain RD1_RS03310 PF02469 Fasciclin domain RD1_RS03320 PF13419 Haloacid dehalogenase-like hydrolase RD1_RS03325 PF00174 Oxidoreductase molybdopterin binding domain RD1_RS03330 PF01794 Ferric reductase like transmembrane component RD1_RS03380 PF07298 NnrU protein RD1_RS03385 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component RD1_RS03395 PF03480 Bacterial extracellular solute-binding protein, family 7 RD1_RS03400 PF07729 FCD domain RD1_RS03400 PF00392 Bacterial regulatory proteins, gntR family RD1_RS03405 PF00701 Dihydrodipicolinate synthetase family RD1_RS03410 PF00294 pfkB family carbohydrate kinase RD1_RS03415 PF08543 Phosphomethylpyrimidine kinase RD1_RS03420 PF01266 FAD dependent oxidoreductase RD1_RS03430 PF05690 Thiazole biosynthesis protein ThiG RD1_RS03435 PF02581 Thiamine monophosphate synthase RD1_RS03445 PF09084 NMT1/THI5 like RD1_RS03450 PF03070 TENA/THI-4/PQQC family RD1_RS03455 PF00005 ABC transporter RD1_RS03465 PF00528 Binding-protein-dependent transport system inner membrane component RD1_RS03490 PF00873 AcrB/AcrD/AcrF family RD1_RS03495 PF00873 AcrB/AcrD/AcrF family RD1_RS03515 PF01734 Patatin-like phospholipase RD1_RS03540 PF00005 ABC transporter RD1_RS03545 PF00118 TCP-1/cpn60 chaperonin family RD1_RS03550 PF00166 Chaperonin 10 Kd subunit RD1_RS03555 PF13180 PDZ domain RD1_RS03560 PF01435 Peptidase family M48 RD1_RS03585 PF00916 Sulfate permease family RD1_RS03585 PF01740 STAS domain RD1_RS03595 PF00753 Metallo-beta-lactamase superfamily RD1_RS03620 PF02082 Transcriptional regulator RD1_RS03635 PF01654 Cytochrome bd terminal oxidase subunit I RD1_RS03640 PF02322 Cytochrome bd terminal oxidase subunit II RD1_RS03675 PF13476 AAA domain RD1_RS03685 PF00266 Aminotransferase class-V RD1_RS03700 PF00140 Sigma-70 factor, region 1.2 RD1_RS03700 PF04542 Sigma-70 region 2 RD1_RS03700 PF04539 Sigma-70 region 3 RD1_RS03700 PF04545 Sigma-70, region 4 RD1_RS03705 PF04851 Type III restriction enzyme, res subunit RD1_RS03705 PF00271 Helicase conserved C-terminal domain RD1_RS03705 PF17757 UvrB interaction domain RD1_RS03705 PF12344 Ultra-violet resistance protein B RD1_RS03705 PF02151 UvrB/uvrC motif RD1_RS03715 PF13476 AAA domain RD1_RS03755 PF01678 Diaminopimelate epimerase RD1_RS03760 PF00919 Uncharacterized protein family UPF0004 RD1_RS03760 PF04055 Radical SAM superfamily RD1_RS03780 PF01177 Asp/Glu/Hydantoin racemase RD1_RS03785 PF00291 Pyridoxal-phosphate dependent enzyme RD1_RS03790 PF03466 LysR substrate binding domain RD1_RS03790 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RD1_RS03795 PF01515 Phosphate acetyl/butaryl transferase RD1_RS03805 PF03601 Conserved hypothetical protein 698 RD1_RS03810 PF00205 Thiamine pyrophosphate enzyme, central domain RD1_RS03810 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain RD1_RS03810 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain RD1_RS03815 PF01266 FAD dependent oxidoreductase RD1_RS03830 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component RD1_RS03830 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component RD1_RS03835 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component RD1_RS03835 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component RD1_RS03840 PF03480 Bacterial extracellular solute-binding protein, family 7 RD1_RS03845 PF00392 Bacterial regulatory proteins, gntR family RD1_RS03845 PF00155 Aminotransferase class I and II RD1_RS03860 PF00202 Aminotransferase class-III RD1_RS03865 PF00171 Aldehyde dehydrogenase family RD1_RS03870 PF00871 Acetokinase family RD1_RS03875 PF01515 Phosphate acetyl/butaryl transferase RD1_RS03890 PF01820 D-ala D-ala ligase N-terminus RD1_RS03890 PF07478 D-ala D-ala ligase C-terminus RD1_RS03905 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component RD1_RS03915 PF00795 Carbon-nitrogen hydrolase RD1_RS03920 PF18029 Glyoxalase-like domain RD1_RS03935 PF02653 Branched-chain amino acid transport system / permease component RD1_RS03945 PF00005 ABC transporter RD1_RS03945 PF12399 Branched-chain amino acid ATP-binding cassette transporter RD1_RS03950 PF00005 ABC transporter RD1_RS03955 PF01177 Asp/Glu/Hydantoin racemase RD1_RS03965 PF13407 Periplasmic binding protein domain RD1_RS03970 PF00005 ABC transporter RD1_RS03975 PF02653 Branched-chain amino acid transport system / permease component RD1_RS03980 PF02653 Branched-chain amino acid transport system / permease component RD1_RS04000 PF07726 ATPase family associated with various cellular activities (AAA) RD1_RS04000 PF17863 AAA lid domain RD1_RS04035 PF00196 Bacterial regulatory proteins, luxR family RD1_RS04035 PF00072 Response regulator receiver domain RD1_RS04045 PF00072 Response regulator receiver domain RD1_RS04045 PF01627 Hpt domain RD1_RS04045 PF00512 His Kinase A (phospho-acceptor) domain RD1_RS04045 PF00672 HAMP domain RD1_RS04045 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RD1_RS04075 PF00107 Zinc-binding dehydrogenase RD1_RS04075 PF08240 Alcohol dehydrogenase GroES-like domain RD1_RS04080 PF00756 Putative esterase RD1_RS04085 PF00034 Cytochrome c RD1_RS04090 PF13360 PQQ-like domain RD1_RS04100 PF00497 Bacterial extracellular solute-binding proteins, family 3 RD1_RS04160 PF00005 ABC transporter RD1_RS04215 PF13416 Bacterial extracellular solute-binding protein RD1_RS04225 PF13411 MerR HTH family regulatory protein RD1_RS04230 PF00950 ABC 3 transport family RD1_RS04235 PF00950 ABC 3 transport family RD1_RS04240 PF00005 ABC transporter RD1_RS04245 PF01297 Zinc-uptake complex component A periplasmic RD1_RS04250 PF00909 Ammonium Transporter Family RD1_RS04255 PF00392 Bacterial regulatory proteins, gntR family RD1_RS04255 PF07729 FCD domain RD1_RS04260 PF00171 Aldehyde dehydrogenase family RD1_RS04270 PF01321 Creatinase/Prolidase N-terminal domain RD1_RS04270 PF00557 Metallopeptidase family M24 RD1_RS04280 PF07509 Protein of unknown function (DUF1523) RD1_RS04285 PF01230 HIT domain RD1_RS04290 PF01668 SmpB protein RD1_RS04295 PF00581 Rhodanese-like domain RD1_RS04300 PF00155 Aminotransferase class I and II RD1_RS04305 PF00909 Ammonium Transporter Family RD1_RS04310 PF00543 Nitrogen regulatory protein P-II RD1_RS04315 PF00912 Transglycosylase RD1_RS04315 PF17092 Penicillin-binding protein OB-like domain RD1_RS04315 PF00905 Penicillin binding protein transpeptidase domain RD1_RS04345 PF01329 Pterin 4 alpha carbinolamine dehydratase RD1_RS04350 PF05552 Conserved TM helix RD1_RS04350 PF00924 Mechanosensitive ion channel RD1_RS04355 PF08534 Redoxin RD1_RS04360 PF14759 Reductase C-terminal RD1_RS04360 PF07992 Pyridine nucleotide-disulphide oxidoreductase RD1_RS04375 PF00557 Metallopeptidase family M24 RD1_RS04380 PF17746 SfsA N-terminal OB domain RD1_RS04380 PF03749 Sugar fermentation stimulation protein RE domain RD1_RS04385 PF02464 Competence-damaged protein RD1_RS04385 PF00994 Probable molybdopterin binding domain RD1_RS04385 PF18146 Damage-inducible protein CinA KH domain RD1_RS04405 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RD1_RS04405 PF03466 LysR substrate binding domain RD1_RS04420 PF07992 Pyridine nucleotide-disulphide oxidoreductase RD1_RS04420 PF00724 NADH:flavin oxidoreductase / NADH oxidase family RD1_RS04430 PF00293 NUDIX domain RD1_RS04440 PF00294 pfkB family carbohydrate kinase RD1_RS04445 PF00730 HhH-GPD superfamily base excision DNA repair protein RD1_RS04445 PF10576 Iron-sulfur binding domain of endonuclease III RD1_RS04445 PF00633 Helix-hairpin-helix motif RD1_RS04450 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain RD1_RS04450 PF02805 Metal binding domain of Ada RD1_RS04450 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain RD1_RS04450 PF12833 Helix-turn-helix domain RD1_RS04455 PF00691 OmpA family RD1_RS04455 PF05736 OprF membrane domain RD1_RS04460 PF00890 FAD binding domain RD1_RS04460 PF03358 NADPH-dependent FMN reductase RD1_RS04460 PF04205 FMN-binding domain RD1_RS04470 PF05430 S-adenosyl-L-methionine-dependent methyltransferase RD1_RS04470 PF01266 FAD dependent oxidoreductase RD1_RS04475 PF01551 Peptidase family M23 RD1_RS04475 PF10145 Phage-related minor tail protein RD1_RS04475 PF01464 Transglycosylase SLT domain RD1_RS04480 PF00701 Dihydrodipicolinate synthetase family RD1_RS04490 PF12800 4Fe-4S binding domain RD1_RS04490 PF13247 4Fe-4S dicluster domain RD1_RS04495 PF04879 Molybdopterin oxidoreductase Fe4S4 domain RD1_RS04495 PF01568 Molydopterin dinucleotide binding domain RD1_RS04495 PF00384 Molybdopterin oxidoreductase RD1_RS04505 PF00205 Thiamine pyrophosphate enzyme, central domain RD1_RS04505 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain RD1_RS04505 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain RD1_RS04510 PF00392 Bacterial regulatory proteins, gntR family RD1_RS04510 PF00155 Aminotransferase class I and II RD1_RS04515 PF03976 Polyphosphate kinase 2 (PPK2) RD1_RS04525 PF00202 Aminotransferase class-III RD1_RS04535 PF00005 ABC transporter RD1_RS04540 PF00528 Binding-protein-dependent transport system inner membrane component RD1_RS04545 PF00487 Fatty acid desaturase RD1_RS04550 PF00271 Helicase conserved C-terminal domain RD1_RS04550 PF03880 DbpA RNA binding domain RD1_RS04550 PF00270 DEAD/DEAH box helicase RD1_RS04555 PF01063 Amino-transferase class IV RD1_RS04570 PF00724 NADH:flavin oxidoreductase / NADH oxidase family RD1_RS04570 PF07992 Pyridine nucleotide-disulphide oxidoreductase RD1_RS04595 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit RD1_RS04605 PF01037 Lrp/AsnC ligand binding domain RD1_RS04610 PF03328 HpcH/HpaI aldolase/citrate lyase family RD1_RS04620 PF13378 Enolase C-terminal domain-like RD1_RS04620 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain RD1_RS04625 PF01063 Amino-transferase class IV RD1_RS04630 PF01575 MaoC like domain RD1_RS04640 PF02887 Pyruvate kinase, alpha/beta domain RD1_RS04640 PF00224 Pyruvate kinase, barrel domain RD1_RS04650 PF01632 Ribosomal protein L35 RD1_RS04655 PF00453 Ribosomal protein L20 RD1_RS04665 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain RD1_RS04665 PF01409 tRNA synthetases class II core domain (F) RD1_RS04675 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain RD1_RS04675 PF03484 tRNA synthetase B5 domain RD1_RS04675 PF03483 B3/4 domain RD1_RS04675 PF03147 Ferredoxin-fold anticodon binding domain RD1_RS04675 PF01588 Putative tRNA binding domain RD1_RS04680 PF11071 Nucleoside 2-deoxyribosyltransferase YtoQ RD1_RS04685 PF01741 Large-conductance mechanosensitive channel, MscL RD1_RS04695 PF17820 PDZ domain RD1_RS04695 PF13180 PDZ domain RD1_RS04725 PF00005 ABC transporter RD1_RS04755 PF00355 Rieske [2Fe-2S] domain RD1_RS04755 PF00848 Ring hydroxylating alpha subunit (catalytic domain) RD1_RS04765 PF01262 Alanine dehydrogenase/PNT, C-terminal domain RD1_RS04765 PF05222 Alanine dehydrogenase/PNT, N-terminal domain RD1_RS04770 PF01037 Lrp/AsnC ligand binding domain RD1_RS04775 PF03358 NADPH-dependent FMN reductase RD1_RS04780 PF01165 Ribosomal protein S21 RD1_RS04790 PF00107 Zinc-binding dehydrogenase RD1_RS04790 PF08240 Alcohol dehydrogenase GroES-like domain RD1_RS04795 PF00107 Zinc-binding dehydrogenase RD1_RS04795 PF08240 Alcohol dehydrogenase GroES-like domain RD1_RS04800 PF00445 Ribonuclease T2 family RD1_RS04810 PF01042 Endoribonuclease L-PSP RD1_RS04815 PF02132 RecR protein RD1_RS04815 PF13662 Toprim domain RD1_RS04820 PF02575 YbaB/EbfC DNA-binding family RD1_RS04825 PF12170 DNA polymerase III tau subunit V interacting with alpha RD1_RS04825 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding RD1_RS04825 PF12169 DNA polymerase III subunits gamma and tau domain III RD1_RS04830 PF00107 Zinc-binding dehydrogenase RD1_RS04830 PF08240 Alcohol dehydrogenase GroES-like domain RD1_RS04835 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component RD1_RS04845 PF03480 Bacterial extracellular solute-binding protein, family 7 RD1_RS04850 PF07729 FCD domain RD1_RS04850 PF00392 Bacterial regulatory proteins, gntR family RD1_RS04855 PF00528 Binding-protein-dependent transport system inner membrane component RD1_RS04860 PF00528 Binding-protein-dependent transport system inner membrane component RD1_RS04865 PF00005 ABC transporter RD1_RS04880 PF00528 Binding-protein-dependent transport system inner membrane component RD1_RS04885 PF08402 TOBE domain RD1_RS04885 PF00005 ABC transporter RD1_RS04905 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) RD1_RS04915 PF00815 Histidinol dehydrogenase RD1_RS04920 PF06793 Uncharacterised protein family (UPF0262) RD1_RS04975 PF06421 GTP-binding protein LepA C-terminus RD1_RS04975 PF03144 Elongation factor Tu domain 2 RD1_RS04975 PF00009 Elongation factor Tu GTP binding domain RD1_RS04975 PF00679 Elongation factor G C-terminus RD1_RS04990 PF01258 Prokaryotic dksA/traR C4-type zinc finger RD1_RS05015 PF13456 Reverse transcriptase-like RD1_RS05015 PF00300 Histidine phosphatase superfamily (branch 1) RD1_RS05035 PF00924 Mechanosensitive ion channel RD1_RS05045 PF12911 N-terminal TM domain of oligopeptide transport permease C RD1_RS05045 PF00528 Binding-protein-dependent transport system inner membrane component RD1_RS05050 PF00528 Binding-protein-dependent transport system inner membrane component RD1_RS05055 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle RD1_RS05060 PF00005 ABC transporter RD1_RS05060 PF08352 Oligopeptide/dipeptide transporter, C-terminal region RD1_RS05070 PF00834 Ribulose-phosphate 3 epimerase family RD1_RS05075 PF13193 AMP-binding enzyme C-terminal domain RD1_RS05075 PF00501 AMP-binding enzyme RD1_RS05085 PF08240 Alcohol dehydrogenase GroES-like domain RD1_RS05085 PF00107 Zinc-binding dehydrogenase RD1_RS05100 PF00929 Exonuclease RD1_RS05115 PF00474 Sodium:solute symporter family RD1_RS05125 PF05191 Adenylate kinase, active site lid RD1_RS05130 PF16177 Acetyl-coenzyme A synthetase N-terminus RD1_RS05130 PF13193 AMP-binding enzyme C-terminal domain RD1_RS05130 PF00501 AMP-binding enzyme RD1_RS05135 PF03734 L,D-transpeptidase catalytic domain RD1_RS05140 PF00892 EamA-like transporter family RD1_RS05145 PF13406 Transglycosylase SLT domain RD1_RS05160 PF00529 HlyD membrane-fusion protein of T1SS RD1_RS05165 PF00664 ABC transporter transmembrane region RD1_RS05165 PF00005 ABC transporter RD1_RS05165 PF03412 Peptidase C39 family RD1_RS05170 PF02321 Outer membrane efflux protein RD1_RS05185 PF05899 Protein of unknown function (DUF861) RD1_RS05185 PF07883 Cupin domain RD1_RS05190 PF00132 Bacterial transferase hexapeptide (six repeats) RD1_RS05190 PF06426 Serine acetyltransferase, N-terminal RD1_RS05200 PF01361 Tautomerase enzyme RD1_RS05210 PF02798 Glutathione S-transferase, N-terminal domain RD1_RS05210 PF14497 Glutathione S-transferase, C-terminal domain RD1_RS05215 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RD1_RS05215 PF03466 LysR substrate binding domain RD1_RS05220 PF00440 Bacterial regulatory proteins, tetR family RD1_RS05220 PF08361 MAATS-type transcriptional repressor, C-terminal region RD1_RS05245 PF01527 Transposase RD1_RS05250 PF13276 HTH-like domain RD1_RS05250 PF13683 Integrase core domain RD1_RS05260 PF01527 Transposase RD1_RS05265 PF13276 HTH-like domain RD1_RS05265 PF13683 Integrase core domain RD1_RS05285 PF04055 Radical SAM superfamily RD1_RS05285 PF13186 Iron-sulfur cluster-binding domain RD1_RS05290 PF05402 Coenzyme PQQ synthesis protein D (PqqD) RD1_RS05295 PF03070 TENA/THI-4/PQQC family RD1_RS05300 PF12706 Beta-lactamase superfamily domain RD1_RS05305 PF08042 PqqA family RD1_RS05310 PF00072 Response regulator receiver domain RD1_RS05310 PF00486 Transcriptional regulatory protein, C terminal RD1_RS05315 PF00672 HAMP domain RD1_RS05315 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RD1_RS05315 PF00512 His Kinase A (phospho-acceptor) domain RD1_RS05330 PF00005 ABC transporter RD1_RS05335 PF03328 HpcH/HpaI aldolase/citrate lyase family RD1_RS05345 PF08442 ATP-grasp domain RD1_RS05345 PF00549 CoA-ligase RD1_RS05350 PF02629 CoA binding domain RD1_RS05350 PF00549 CoA-ligase RD1_RS05355 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain RD1_RS05355 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain RD1_RS05360 PF00464 Serine hydroxymethyltransferase RD1_RS05365 PF01556 DnaJ C terminal domain RD1_RS05365 PF00226 DnaJ domain RD1_RS05365 PF00684 DnaJ central domain RD1_RS05375 PF00672 HAMP domain RD1_RS05375 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain RD1_RS05380 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RD1_RS05380 PF03466 LysR substrate binding domain RD1_RS05420 PF02938 GAD domain RD1_RS05420 PF00152 tRNA synthetases class II (D, K and N) RD1_RS05420 PF01336 OB-fold nucleic acid binding domain RD1_RS05430 PF00486 Transcriptional regulatory protein, C terminal RD1_RS05430 PF00072 Response regulator receiver domain RD1_RS05450 PF00881 Nitroreductase family RD1_RS05455 PF00850 Histone deacetylase domain RD1_RS05460 PF00579 tRNA synthetases class I (W and Y) RD1_RS05470 PF03023 Lipid II flippase MurJ RD1_RS05475 PF01966 HD domain RD1_RS05475 PF08335 GlnD PII-uridylyltransferase RD1_RS05485 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases RD1_RS05490 PF02021 Uncharacterised protein family UPF0102 RD1_RS05495 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain RD1_RS05495 PF02951 Prokaryotic glutathione synthetase, N-terminal domain RD1_RS05500 PF13335 Magnesium chelatase, subunit ChlI C-terminal RD1_RS05500 PF01078 Magnesium chelatase, subunit ChlI RD1_RS05515 PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase RD1_RS05520 PF00140 Sigma-70 factor, region 1.2 RD1_RS05520 PF04542 Sigma-70 region 2 RD1_RS05520 PF04545 Sigma-70, region 4 RD1_RS05530 PF04127 DNA / pantothenate metabolism flavoprotein RD1_RS05530 PF02441 Flavoprotein RD1_RS05535 PF00692 dUTPase RD1_RS05540 PF00899 ThiF family RD1_RS05545 PF01432 Peptidase family M3 RD1_RS05550 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain RD1_RS05555 PF01098 Cell cycle protein RD1_RS05560 PF00905 Penicillin binding protein transpeptidase domain RD1_RS05560 PF03717 Penicillin-binding Protein dimerisation domain RD1_RS05570 PF04085 rod shape-determining protein MreC RD1_RS05585 PF08502 LeuA allosteric (dimerisation) domain RD1_RS05585 PF00682 HMGL-like RD1_RS05595 PF04244 Deoxyribodipyrimidine photo-lyase-related protein RD1_RS05605 PF00795 Carbon-nitrogen hydrolase RD1_RS05605 PF02540 NAD synthase RD1_RS05620 PF00749 tRNA synthetases class I (E and Q), catalytic domain RD1_RS05625 PF01554 MatE RD1_RS05635 PF01571 Aminomethyltransferase folate-binding domain RD1_RS05635 PF08669 Glycine cleavage T-protein C-terminal barrel domain RD1_RS05640 PF01597 Glycine cleavage H-protein RD1_RS05645 PF02347 Glycine cleavage system P-protein RD1_RS05655 PF00005 ABC transporter RD1_RS05660 PF13472 GDSL-like Lipase/Acylhydrolase family RD1_RS05665 PF00313 'Cold-shock' DNA-binding domain RD1_RS05680 PF00313 'Cold-shock' DNA-binding domain RD1_RS05705 PF12848 ABC transporter RD1_RS05705 PF00005 ABC transporter RD1_RS05725 PF01467 Cytidylyltransferase-like RD1_RS05730 PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family RD1_RS05740 PF01921 tRNA synthetases class I (K) RD1_RS05785 PF17757 UvrB interaction domain RD1_RS05785 PF12344 Ultra-violet resistance protein B RD1_RS05785 PF00271 Helicase conserved C-terminal domain RD1_RS05785 PF04851 Type III restriction enzyme, res subunit RD1_RS05785 PF02151 UvrB/uvrC motif RD1_RS05800 PF02872 5'-nucleotidase, C-terminal domain RD1_RS05800 PF00149 Calcineurin-like phosphoesterase RD1_RS05805 PF09296 NADH pyrophosphatase-like rudimentary NUDIX domain RD1_RS05805 PF00293 NUDIX domain RD1_RS05805 PF09297 NADH pyrophosphatase zinc ribbon domain RD1_RS05815 PF00800 Prephenate dehydratase RD1_RS05815 PF01817 Chorismate mutase type II RD1_RS05820 PF00034 Cytochrome c RD1_RS05825 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle RD1_RS05830 PF00528 Binding-protein-dependent transport system inner membrane component RD1_RS05835 PF12911 N-terminal TM domain of oligopeptide transport permease C RD1_RS05835 PF00528 Binding-protein-dependent transport system inner membrane component RD1_RS05840 PF00005 ABC transporter RD1_RS05840 PF08352 Oligopeptide/dipeptide transporter, C-terminal region RD1_RS05845 PF04055 Radical SAM superfamily RD1_RS05850 PF13545 Crp-like helix-turn-helix domain RD1_RS05850 PF00027 Cyclic nucleotide-binding domain RD1_RS05860 PF00115 Cytochrome C and Quinol oxidase polypeptide I RD1_RS05875 PF14715 N-terminal domain of cytochrome oxidase-cbb3, FixP RD1_RS05875 PF13442 Cytochrome C oxidase, cbb3-type, subunit III RD1_RS05880 PF13746 4Fe-4S dicluster domain RD1_RS05880 PF11614 IG-like fold at C-terminal of FixG, putative oxidoreductase RD1_RS05880 PF12801 4Fe-4S binding domain RD1_RS05890 PF00403 Heavy-metal-associated domain RD1_RS05900 PF07943 Penicillin-binding protein 5, C-terminal domain RD1_RS05900 PF00768 D-alanyl-D-alanine carboxypeptidase RD1_RS05905 PF02617 ATP-dependent Clp protease adaptor protein ClpS RD1_RS05910 PF05175 Methyltransferase small domain RD1_RS05910 PF08468 Methyltransferase small domain N-terminal RD1_RS05920 PF01218 Coproporphyrinogen III oxidase RD1_RS05925 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain RD1_RS05925 PF03900 Porphobilinogen deaminase, C-terminal domain RD1_RS05930 PF01208 Uroporphyrinogen decarboxylase (URO-D) RD1_RS05940 PF03480 Bacterial extracellular solute-binding protein, family 7 RD1_RS05950 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component RD1_RS05965 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle RD1_RS06000 PF10609 NUBPL iron-transfer P-loop NTPase RD1_RS06000 PF01883 Iron-sulfur cluster assembly protein RD1_RS06025 PF01197 Ribosomal protein L31 RD1_RS06030 PF01245 Ribosomal protein L19 RD1_RS06040 PF01746 tRNA (Guanine-1)-methyltransferase RD1_RS06045 PF01782 RimM N-terminal domain RD1_RS06045 PF05239 PRC-barrel domain RD1_RS06050 PF00886 Ribosomal protein S16 RD1_RS06070 PF00448 SRP54-type protein, GTPase domain RD1_RS06070 PF02881 SRP54-type protein, helical bundle domain RD1_RS06070 PF02978 Signal peptide binding domain RD1_RS06095 PF09527 Putative F0F1-ATPase subunit Ca2+/Mg2+ transporter RD1_RS06100 PF00119 ATP synthase A chain RD1_RS06105 PF00137 ATP synthase subunit C RD1_RS06110 PF00430 ATP synthase B/B' CF(0) RD1_RS06115 PF00430 ATP synthase B/B' CF(0) RD1_RS06120 PF00392 Bacterial regulatory proteins, gntR family RD1_RS06120 PF07729 FCD domain RD1_RS06125 PF02463 RecF/RecN/SMC N terminal domain RD1_RS06140 PF03186 CobD/Cbib protein RD1_RS06145 PF00155 Aminotransferase class I and II RD1_RS06155 PF13409 Glutathione S-transferase, N-terminal domain RD1_RS06165 PF00155 Aminotransferase class I and II RD1_RS06170 PF01327 Polypeptide deformylase RD1_RS06175 PF01327 Polypeptide deformylase RD1_RS06180 PF00551 Formyl transferase RD1_RS06180 PF02911 Formyl transferase, C-terminal domain RD1_RS06190 PF00873 AcrB/AcrD/AcrF family RD1_RS06195 PF13533 Biotin-lipoyl like RD1_RS06210 PF16350 FAD dependent oxidoreductase central domain RD1_RS06210 PF01571 Aminomethyltransferase folate-binding domain RD1_RS06210 PF08669 Glycine cleavage T-protein C-terminal barrel domain RD1_RS06210 PF01266 FAD dependent oxidoreductase RD1_RS06225 PF01557 Fumarylacetoacetate (FAA) hydrolase family RD1_RS06235 PF03458 UPF0126 domain RD1_RS06240 PF00075 RNase H RD1_RS06260 PF02401 LytB protein RD1_RS06270 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) RD1_RS06275 PF01192 RNA polymerase Rpb6 RD1_RS06280 PF02824 TGS domain RD1_RS06280 PF04607 Region found in RelA / SpoT proteins RD1_RS06280 PF13291 ACT domain RD1_RS06290 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ RD1_RS06295 PF01810 LysE type translocator RD1_RS06300 PF01648 4'-phosphopantetheinyl transferase superfamily RD1_RS06305 PF10502 Signal peptidase, peptidase S26 RD1_RS06310 PF14622 Ribonuclease-III-like RD1_RS06310 PF00035 Double-stranded RNA binding motif RD1_RS06315 PF01926 50S ribosome-binding GTPase RD1_RS06315 PF07650 KH domain RD1_RS06325 PF02565 Recombination protein O C terminal RD1_RS06325 PF11967 Recombination protein O N terminal RD1_RS06340 PF02771 Acyl-CoA dehydrogenase, N-terminal domain RD1_RS06340 PF00441 Acyl-CoA dehydrogenase, C-terminal domain RD1_RS06340 PF02770 Acyl-CoA dehydrogenase, middle domain RD1_RS06345 PF01381 Helix-turn-helix RD1_RS06360 PF01293 Phosphoenolpyruvate carboxykinase RD1_RS06365 PF00072 Response regulator receiver domain RD1_RS06365 PF00486 Transcriptional regulatory protein, C terminal RD1_RS06370 PF00512 His Kinase A (phospho-acceptor) domain RD1_RS06370 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RD1_RS06370 PF00672 HAMP domain RD1_RS06370 PF13756 Stimulus-sensing domain RD1_RS06370 PF13755 Sensor N-terminal transmembrane domain RD1_RS06375 PF02603 HPr Serine kinase N terminus RD1_RS06375 PF07475 HPr Serine kinase C-terminal domain RD1_RS06380 PF03668 P-loop ATPase protein family RD1_RS06390 PF00381 PTS HPr component phosphorylation site RD1_RS06400 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain RD1_RS06400 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain RD1_RS06410 PF00766 Electron transfer flavoprotein FAD-binding domain RD1_RS06410 PF01012 Electron transfer flavoprotein domain RD1_RS06415 PF01012 Electron transfer flavoprotein domain RD1_RS06420 PF01923 Cobalamin adenosyltransferase RD1_RS06430 PF00106 short chain dehydrogenase RD1_RS06440 PF03989 DNA gyrase C-terminal domain, beta-propeller RD1_RS06440 PF00521 DNA gyrase/topoisomerase IV, subunit A RD1_RS06445 PF00067 Cytochrome P450 RD1_RS06455 PF03143 Elongation factor Tu C-terminal domain RD1_RS06455 PF00009 Elongation factor Tu GTP binding domain RD1_RS06455 PF03144 Elongation factor Tu domain 2 RD1_RS06470 PF00338 Ribosomal protein S10p/S20e RD1_RS06475 PF00297 Ribosomal protein L3 RD1_RS06480 PF00573 Ribosomal protein L4/L1 family RD1_RS06485 PF00276 Ribosomal protein L23 RD1_RS06490 PF00313 'Cold-shock' DNA-binding domain RD1_RS06505 PF03947 Ribosomal Proteins L2, C-terminal domain RD1_RS06505 PF00181 Ribosomal Proteins L2, RNA binding domain RD1_RS06510 PF00203 Ribosomal protein S19 RD1_RS06515 PF00237 Ribosomal protein L22p/L17e RD1_RS06520 PF07650 KH domain RD1_RS06520 PF00189 Ribosomal protein S3, C-terminal domain RD1_RS06525 PF00252 Ribosomal protein L16p/L10e RD1_RS06545 PF02423 Ornithine cyclodeaminase/mu-crystallin family RD1_RS06550 PF00491 Arginase family RD1_RS06560 PF00831 Ribosomal L29 protein RD1_RS06565 PF00366 Ribosomal protein S17 RD1_RS06570 PF00238 Ribosomal protein L14p/L23e RD1_RS06575 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 RD1_RS06575 PF00467 KOW motif RD1_RS06580 PF00281 Ribosomal protein L5 RD1_RS06580 PF00673 ribosomal L5P family C-terminus RD1_RS06585 PF00253 Ribosomal protein S14p/S29e RD1_RS06590 PF00410 Ribosomal protein S8 RD1_RS06595 PF00347 Ribosomal protein L6 RD1_RS06600 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast RD1_RS06605 PF03719 Ribosomal protein S5, C-terminal domain RD1_RS06605 PF00333 Ribosomal protein S5, N-terminal domain RD1_RS06610 PF00327 Ribosomal protein L30p/L7e RD1_RS06625 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A RD1_RS06630 PF00344 SecY translocase RD1_RS06635 PF05191 Adenylate kinase, active site lid RD1_RS06645 PF00416 Ribosomal protein S13/S18 RD1_RS06650 PF00411 Ribosomal protein S11 RD1_RS06655 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain RD1_RS06655 PF01000 RNA polymerase Rpb3/RpoA insert domain RD1_RS06655 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain RD1_RS06660 PF01196 Ribosomal protein L17 RD1_RS06665 PF16193 AAA C-terminal domain RD1_RS06665 PF12002 MgsA AAA+ ATPase C terminal RD1_RS06665 PF00004 ATPase family associated with various cellular activities (AAA) RD1_RS06670 PF02537 CrcB-like protein, Camphor Resistance (CrcB) RD1_RS06675 PF01479 S4 domain RD1_RS06675 PF00849 RNA pseudouridylate synthase RD1_RS06680 PF13419 Haloacid dehalogenase-like hydrolase RD1_RS06690 PF00497 Bacterial extracellular solute-binding proteins, family 3 RD1_RS06695 PF00528 Binding-protein-dependent transport system inner membrane component RD1_RS06700 PF00528 Binding-protein-dependent transport system inner membrane component RD1_RS06705 PF00005 ABC transporter RD1_RS06710 PF00300 Histidine phosphatase superfamily (branch 1) RD1_RS06725 PF00696 Amino acid kinase family RD1_RS06730 PF01926 50S ribosome-binding GTPase RD1_RS06740 PF14849 YidC periplasmic domain RD1_RS06740 PF02096 60Kd inner membrane protein RD1_RS06745 PF00990 Diguanylate cyclase, GGDEF domain RD1_RS06745 PF13188 PAS domain RD1_RS06745 PF00563 EAL domain RD1_RS06745 PF03707 Bacterial signalling protein N terminal repeat RD1_RS06750 PF01171 PP-loop family RD1_RS06755 PF01809 Putative membrane protein insertion efficiency factor RD1_RS06760 PF00825 Ribonuclease P RD1_RS06765 PF00468 Ribosomal protein L34 RD1_RS06775 PF07992 Pyridine nucleotide-disulphide oxidoreductase RD1_RS06775 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain RD1_RS06780 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RD1_RS06780 PF00512 His Kinase A (phospho-acceptor) domain RD1_RS06780 PF00989 PAS fold RD1_RS06820 PF00501 AMP-binding enzyme RD1_RS06820 PF13193 AMP-binding enzyme C-terminal domain RD1_RS06830 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component RD1_RS06840 PF03480 Bacterial extracellular solute-binding protein, family 7 RD1_RS06845 PF00392 Bacterial regulatory proteins, gntR family RD1_RS06845 PF07729 FCD domain RD1_RS06855 PF01232 Mannitol dehydrogenase Rossmann domain RD1_RS06855 PF08125 Mannitol dehydrogenase C-terminal domain RD1_RS06860 PF00005 ABC transporter RD1_RS06860 PF08402 TOBE domain RD1_RS06865 PF00528 Binding-protein-dependent transport system inner membrane component RD1_RS06870 PF00528 Binding-protein-dependent transport system inner membrane component RD1_RS06880 PF00356 Bacterial regulatory proteins, lacI family RD1_RS06885 PF01590 GAF domain RD1_RS06885 PF00512 His Kinase A (phospho-acceptor) domain RD1_RS06885 PF00360 Phytochrome region RD1_RS06885 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RD1_RS06885 PF08446 PAS fold RD1_RS06900 PF01339 CheB methylesterase RD1_RS06900 PF00072 Response regulator receiver domain RD1_RS06905 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain RD1_RS06905 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain RD1_RS06905 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain RD1_RS06910 PF03069 Acetamidase/Formamidase family RD1_RS06920 PF00795 Carbon-nitrogen hydrolase RD1_RS06925 PF03951 Glutamine synthetase, beta-Grasp domain RD1_RS06925 PF00120 Glutamine synthetase, catalytic domain RD1_RS06930 PF02685 Glucokinase RD1_RS06930 PF01418 Helix-turn-helix domain, rpiR family RD1_RS06930 PF01380 SIS domain RD1_RS06940 PF00857 Isochorismatase family RD1_RS06945 PF12399 Branched-chain amino acid ATP-binding cassette transporter RD1_RS06945 PF00005 ABC transporter RD1_RS06950 PF13458 Periplasmic binding protein RD1_RS06955 PF00005 ABC transporter RD1_RS06960 PF02653 Branched-chain amino acid transport system / permease component RD1_RS06965 PF02653 Branched-chain amino acid transport system / permease component RD1_RS06970 PF04143 Sulphur transport RD1_RS06975 PF01022 Bacterial regulatory protein, arsR family RD1_RS06985 PF02683 Cytochrome C biogenesis protein transmembrane region RD1_RS07015 PF00149 Calcineurin-like phosphoesterase RD1_RS07015 PF02872 5'-nucleotidase, C-terminal domain RD1_RS07025 PF00034 Cytochrome c RD1_RS07030 PF00034 Cytochrome c RD1_RS07035 PF07992 Pyridine nucleotide-disulphide oxidoreductase RD1_RS07035 PF09242 Flavocytochrome c sulphide dehydrogenase, flavin-binding RD1_RS07035 PF10518 TAT (twin-arginine translocation) pathway signal sequence RD1_RS07045 PF04143 Sulphur transport RD1_RS07065 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component RD1_RS07070 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain RD1_RS07070 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain RD1_RS07075 PF00625 Guanylate kinase RD1_RS07075 PF00591 Glycosyl transferase family, a/b domain RD1_RS07075 PF02885 Glycosyl transferase family, helical bundle domain RD1_RS07075 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain RD1_RS07080 PF01979 Amidohydrolase family RD1_RS07085 PF12802 MarR family RD1_RS07095 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain RD1_RS07095 PF01799 [2Fe-2S] binding domain RD1_RS07095 PF00111 2Fe-2S iron-sulfur cluster binding domain RD1_RS07095 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase RD1_RS07100 PF00037 4Fe-4S binding domain RD1_RS07120 PF03480 Bacterial extracellular solute-binding protein, family 7 RD1_RS07130 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component RD1_RS07140 PF04205 FMN-binding domain RD1_RS07140 PF12801 4Fe-4S binding domain RD1_RS07145 PF13473 Cupredoxin-like domain RD1_RS07145 PF18764 Nitrous oxide reductase propeller repeat RD1_RS07145 PF18793 Nitrous oxide reductase propeller repeat 2 RD1_RS07150 PF05048 Periplasmic copper-binding protein (NosD) RD1_RS07155 PF00005 ABC transporter RD1_RS07160 PF12679 ABC-2 family transporter protein RD1_RS07165 PF05573 NosL RD1_RS07195 PF00510 Cytochrome c oxidase subunit III RD1_RS07200 PF00092 von Willebrand factor type A domain RD1_RS07205 PF08406 CbbQ/NirQ/NorQ C-terminal RD1_RS07205 PF07728 AAA domain (dynein-related subfamily) RD1_RS07210 PF00115 Cytochrome C and Quinol oxidase polypeptide I RD1_RS07215 PF00034 Cytochrome c RD1_RS07220 PF00034 Cytochrome c RD1_RS07225 PF12801 4Fe-4S binding domain RD1_RS07230 PF13442 Cytochrome C oxidase, cbb3-type, subunit III RD1_RS07235 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases RD1_RS07240 PF13442 Cytochrome C oxidase, cbb3-type, subunit III RD1_RS07250 PF17805 AsnC-like ligand binding domain RD1_RS07250 PF13404 AsnC-type helix-turn-helix domain RD1_RS07255 PF17805 AsnC-like ligand binding domain RD1_RS07255 PF13404 AsnC-type helix-turn-helix domain RD1_RS07260 PF13404 AsnC-type helix-turn-helix domain RD1_RS07260 PF17805 AsnC-like ligand binding domain RD1_RS07265 PF13186 Iron-sulfur cluster-binding domain RD1_RS07265 PF04055 Radical SAM superfamily RD1_RS07285 PF00155 Aminotransferase class I and II RD1_RS07290 PF00535 Glycosyl transferase family 2 RD1_RS07300 PF00535 Glycosyl transferase family 2 RD1_RS07305 PF05199 GMC oxidoreductase RD1_RS07305 PF00732 GMC oxidoreductase RD1_RS07325 PF00248 Aldo/keto reductase family RD1_RS07330 PF00873 AcrB/AcrD/AcrF family RD1_RS07335 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion RD1_RS07345 PF08534 Redoxin RD1_RS07350 PF00206 Lyase RD1_RS07350 PF14698 Argininosuccinate lyase C-terminal RD1_RS07360 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain RD1_RS07360 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain RD1_RS07375 PF00005 ABC transporter RD1_RS07395 PF07992 Pyridine nucleotide-disulphide oxidoreductase RD1_RS07395 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain RD1_RS07420 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) RD1_RS07420 PF00364 Biotin-requiring enzyme RD1_RS07420 PF02817 e3 binding domain RD1_RS07425 PF16078 2-oxoglutarate dehydrogenase N-terminus RD1_RS07425 PF00676 Dehydrogenase E1 component RD1_RS07425 PF16870 2-oxoglutarate dehydrogenase C-terminal RD1_RS07425 PF02779 Transketolase, pyrimidine binding domain RD1_RS07435 PF00549 CoA-ligase RD1_RS07435 PF02629 CoA binding domain RD1_RS07455 PF08442 ATP-grasp domain RD1_RS07455 PF00549 CoA-ligase RD1_RS07465 PF00056 lactate/malate dehydrogenase, NAD binding domain RD1_RS07465 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain RD1_RS07480 PF03328 HpcH/HpaI aldolase/citrate lyase family RD1_RS07495 PF01575 MaoC like domain RD1_RS07510 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit RD1_RS07520 PF02910 Fumarate reductase flavoprotein C-term RD1_RS07520 PF00890 FAD binding domain RD1_RS07530 PF13237 4Fe-4S dicluster domain RD1_RS07530 PF13085 2Fe-2S iron-sulfur cluster binding domain RD1_RS07550 PF01048 Phosphorylase superfamily RD1_RS07555 PF01642 Methylmalonyl-CoA mutase RD1_RS07555 PF02310 B12 binding domain RD1_RS07565 PF01553 Acyltransferase RD1_RS07570 PF00107 Zinc-binding dehydrogenase RD1_RS07570 PF08240 Alcohol dehydrogenase GroES-like domain RD1_RS07575 PF00196 Bacterial regulatory proteins, luxR family RD1_RS07575 PF03472 Autoinducer binding domain RD1_RS07585 PF18335 ATP-dependent RecD-like DNA helicase SH3 domain RD1_RS07585 PF13538 UvrD-like helicase C-terminal domain RD1_RS07585 PF14490 Helix-hairpin-helix containing domain RD1_RS07595 PF01925 Sulfite exporter TauE/SafE RD1_RS07600 PF02653 Branched-chain amino acid transport system / permease component RD1_RS07605 PF02653 Branched-chain amino acid transport system / permease component RD1_RS07610 PF00005 ABC transporter RD1_RS07615 PF02608 ABC transporter substrate-binding protein PnrA-like RD1_RS07630 PF01106 NifU-like domain RD1_RS07645 PF01063 Amino-transferase class IV RD1_RS07670 PF18693 TRAM domain RD1_RS07670 PF04055 Radical SAM superfamily RD1_RS07670 PF00919 Uncharacterized protein family UPF0004 RD1_RS07680 PF00793 DAHP synthetase I family RD1_RS07710 PF13506 Glycosyl transferase family 21 RD1_RS07715 PF04349 Periplasmic glucan biosynthesis protein, MdoG RD1_RS07730 PF02515 CoA-transferase family III RD1_RS07735 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain RD1_RS07735 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain RD1_RS07735 PF00205 Thiamine pyrophosphate enzyme, central domain RD1_RS07745 PF00202 Aminotransferase class-III RD1_RS07750 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain RD1_RS07750 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain RD1_RS07755 PF00271 Helicase conserved C-terminal domain RD1_RS07755 PF04408 Helicase associated domain (HA2) RD1_RS07755 PF08482 ATP-dependent helicase C-terminal RD1_RS07755 PF00270 DEAD/DEAH box helicase RD1_RS07765 PF00830 Ribosomal L28 family RD1_RS07780 PF02146 Sir2 family RD1_RS07785 PF00795 Carbon-nitrogen hydrolase RD1_RS07790 PF01176 Translation initiation factor 1A / IF-1 RD1_RS07795 PF02545 Maf-like protein RD1_RS07800 PF10150 Ribonuclease E/G family RD1_RS07800 PF00575 S1 RNA binding domain RD1_RS07805 PF03884 DNA gyrase inhibitor YacG RD1_RS07810 PF00999 Sodium/hydrogen exchanger family RD1_RS07815 PF02082 Transcriptional regulator RD1_RS07835 PF04055 Radical SAM superfamily RD1_RS07840 PF04055 Radical SAM superfamily RD1_RS07840 PF02310 B12 binding domain RD1_RS07850 PF02397 Bacterial sugar transferase RD1_RS07855 PF01965 DJ-1/PfpI family RD1_RS07860 PF01266 FAD dependent oxidoreductase RD1_RS07870 PF01571 Aminomethyltransferase folate-binding domain RD1_RS07870 PF08669 Glycine cleavage T-protein C-terminal barrel domain RD1_RS07870 PF07992 Pyridine nucleotide-disulphide oxidoreductase RD1_RS07870 PF17806 Sarcosine oxidase A3 domain RD1_RS07880 PF07690 Major Facilitator Superfamily RD1_RS07890 PF00563 EAL domain RD1_RS07890 PF00990 Diguanylate cyclase, GGDEF domain RD1_RS07890 PF03707 Bacterial signalling protein N terminal repeat RD1_RS07900 PF02770 Acyl-CoA dehydrogenase, middle domain RD1_RS07900 PF00441 Acyl-CoA dehydrogenase, C-terminal domain RD1_RS07900 PF02771 Acyl-CoA dehydrogenase, N-terminal domain RD1_RS07910 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component RD1_RS07920 PF03480 Bacterial extracellular solute-binding protein, family 7 RD1_RS07930 PF00005 ABC transporter RD1_RS07930 PF00664 ABC transporter transmembrane region RD1_RS07935 PF00529 HlyD membrane-fusion protein of T1SS RD1_RS07950 PF01979 Amidohydrolase family RD1_RS07955 PF01380 SIS domain RD1_RS07960 PF07702 UTRA domain RD1_RS07960 PF00392 Bacterial regulatory proteins, gntR family RD1_RS07970 PF01547 Bacterial extracellular solute-binding protein RD1_RS07975 PF00528 Binding-protein-dependent transport system inner membrane component RD1_RS07980 PF00528 Binding-protein-dependent transport system inner membrane component RD1_RS07985 PF02894 Oxidoreductase family, C-terminal alpha/beta domain RD1_RS07985 PF01408 Oxidoreductase family, NAD-binding Rossmann fold RD1_RS07990 PF00005 ABC transporter RD1_RS07990 PF08402 TOBE domain RD1_RS08010 PF00005 ABC transporter RD1_RS08010 PF02687 FtsX-like permease family RD1_RS08010 PF12704 MacB-like periplasmic core domain RD1_RS08030 PF02321 Outer membrane efflux protein RD1_RS08050 PF01132 Elongation factor P (EF-P) OB domain RD1_RS08050 PF09285 Elongation factor P, C-terminal RD1_RS08050 PF08207 Elongation factor P (EF-P) KOW-like domain RD1_RS08055 PF01571 Aminomethyltransferase folate-binding domain RD1_RS08065 PF00005 ABC transporter RD1_RS08065 PF00664 ABC transporter transmembrane region RD1_RS08070 PF00266 Aminotransferase class-V RD1_RS08080 PF00155 Aminotransferase class I and II RD1_RS08085 PF00378 Enoyl-CoA hydratase/isomerase RD1_RS08090 PF10458 Valyl tRNA synthetase tRNA binding arm RD1_RS08090 PF00133 tRNA synthetases class I (I, L, M and V) RD1_RS08090 PF08264 Anticodon-binding domain of tRNA RD1_RS08105 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase RD1_RS08105 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain RD1_RS08120 PF02219 Methylenetetrahydrofolate reductase RD1_RS08125 PF03466 LysR substrate binding domain RD1_RS08125 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RD1_RS08140 PF03652 Holliday junction resolvase RD1_RS08170 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain RD1_RS08170 PF02777 Iron/manganese superoxide dismutases, C-terminal domain RD1_RS08175 PF03641 Possible lysine decarboxylase RD1_RS08185 PF00664 ABC transporter transmembrane region RD1_RS08185 PF00005 ABC transporter RD1_RS08200 PF00873 AcrB/AcrD/AcrF family RD1_RS08215 PF13360 PQQ-like domain RD1_RS08215 PF13442 Cytochrome C oxidase, cbb3-type, subunit III RD1_RS08220 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal RD1_RS08220 PF01926 50S ribosome-binding GTPase RD1_RS08240 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain RD1_RS08240 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase RD1_RS08245 PF01266 FAD dependent oxidoreductase RD1_RS08250 PF04267 Sarcosine oxidase, delta subunit family RD1_RS08255 PF17806 Sarcosine oxidase A3 domain RD1_RS08255 PF08669 Glycine cleavage T-protein C-terminal barrel domain RD1_RS08255 PF01571 Aminomethyltransferase folate-binding domain RD1_RS08255 PF07992 Pyridine nucleotide-disulphide oxidoreductase RD1_RS08270 PF01807 CHC2 zinc finger RD1_RS08270 PF08275 DNA primase catalytic core, N-terminal domain RD1_RS08270 PF13662 Toprim domain RD1_RS08275 PF04546 Sigma-70, non-essential region RD1_RS08275 PF00140 Sigma-70 factor, region 1.2 RD1_RS08275 PF04545 Sigma-70, region 4 RD1_RS08275 PF04542 Sigma-70 region 2 RD1_RS08275 PF04539 Sigma-70 region 3 RD1_RS08275 PF03979 Sigma-70 factor, region 1.1 RD1_RS08295 PF01894 Uncharacterised protein family UPF0047 RD1_RS08300 PF03477 ATP cone domain RD1_RS08305 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region RD1_RS08305 PF01872 RibD C-terminal domain RD1_RS08310 PF00677 Lumazine binding domain RD1_RS08315 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase RD1_RS08315 PF00925 GTP cyclohydrolase II RD1_RS08320 PF00885 6,7-dimethyl-8-ribityllumazine synthase RD1_RS08325 PF01029 NusB family RD1_RS08355 PF12833 Helix-turn-helix domain RD1_RS08355 PF02311 AraC-like ligand binding domain RD1_RS08365 PF00849 RNA pseudouridylate synthase RD1_RS08370 PF04542 Sigma-70 region 2 RD1_RS08370 PF00140 Sigma-70 factor, region 1.2 RD1_RS08370 PF04545 Sigma-70, region 4 RD1_RS08385 PF04675 DNA ligase N terminus RD1_RS08385 PF04679 ATP dependent DNA ligase C terminal region RD1_RS08385 PF01068 ATP dependent DNA ligase domain RD1_RS08415 PF01479 S4 domain RD1_RS08420 PF00037 4Fe-4S binding domain RD1_RS08420 PF11953 Domain of unknown function (DUF3470) RD1_RS08425 PF02559 CarD-like/TRCF domain RD1_RS08430 PF02654 Cobalamin-5-phosphate synthase RD1_RS08435 PF02277 Phosphoribosyltransferase RD1_RS08440 PF00999 Sodium/hydrogen exchanger family RD1_RS08440 PF02254 TrkA-N domain RD1_RS08450 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily RD1_RS08465 PF01053 Cys/Met metabolism PLP-dependent enzyme RD1_RS08470 PF00155 Aminotransferase class I and II RD1_RS08475 PF03466 LysR substrate binding domain RD1_RS08475 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RD1_RS08480 PF00291 Pyridoxal-phosphate dependent enzyme RD1_RS08490 PF00571 CBS domain RD1_RS08490 PF00005 ABC transporter RD1_RS08495 PF00528 Binding-protein-dependent transport system inner membrane component RD1_RS08500 PF00561 alpha/beta hydrolase fold RD1_RS08515 PF13683 Integrase core domain RD1_RS08515 PF13276 HTH-like domain RD1_RS08520 PF01527 Transposase RD1_RS08550 PF01527 Transposase RD1_RS08555 PF13683 Integrase core domain RD1_RS08555 PF13276 HTH-like domain RD1_RS08575 PF02082 Transcriptional regulator RD1_RS08580 PF02492 CobW/HypB/UreG, nucleotide-binding domain RD1_RS08580 PF07683 Cobalamin synthesis protein cobW C-terminal domain RD1_RS08595 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle RD1_RS08600 PF00005 ABC transporter RD1_RS08600 PF08352 Oligopeptide/dipeptide transporter, C-terminal region RD1_RS08605 PF08352 Oligopeptide/dipeptide transporter, C-terminal region RD1_RS08605 PF00005 ABC transporter RD1_RS08610 PF00528 Binding-protein-dependent transport system inner membrane component RD1_RS08615 PF12911 N-terminal TM domain of oligopeptide transport permease C RD1_RS08615 PF00528 Binding-protein-dependent transport system inner membrane component RD1_RS08620 PF00892 EamA-like transporter family RD1_RS08625 PF01970 Tripartite tricarboxylate transporter TctA family RD1_RS08635 PF03401 Tripartite tricarboxylate transporter family receptor RD1_RS08640 PF13193 AMP-binding enzyme C-terminal domain RD1_RS08640 PF00501 AMP-binding enzyme RD1_RS08645 PF12802 MarR family RD1_RS08660 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily RD1_RS08665 PF00303 Thymidylate synthase RD1_RS08670 PF00186 Dihydrofolate reductase RD1_RS08675 PF00313 'Cold-shock' DNA-binding domain RD1_RS08680 PF03960 ArsC family RD1_RS08695 PF05114 Protein of unknown function (DUF692) RD1_RS08705 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) RD1_RS08705 PF02824 TGS domain RD1_RS08705 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain RD1_RS08705 PF03129 Anticodon binding domain RD1_RS08720 PF00561 alpha/beta hydrolase fold RD1_RS08730 PF00561 alpha/beta hydrolase fold RD1_RS08730 PF07167 Poly-beta-hydroxybutyrate polymerase (PhaC) N-terminus RD1_RS08745 PF01266 FAD dependent oxidoreductase RD1_RS08750 PF03951 Glutamine synthetase, beta-Grasp domain RD1_RS08750 PF00120 Glutamine synthetase, catalytic domain RD1_RS08755 PF00958 GMP synthase C terminal domain RD1_RS08755 PF00117 Glutamine amidotransferase class-I RD1_RS08760 PF00120 Glutamine synthetase, catalytic domain RD1_RS08765 PF00528 Binding-protein-dependent transport system inner membrane component RD1_RS08770 PF00528 Binding-protein-dependent transport system inner membrane component RD1_RS08775 PF00497 Bacterial extracellular solute-binding proteins, family 3 RD1_RS08780 PF00005 ABC transporter RD1_RS08800 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ RD1_RS08810 PF06418 CTP synthase N-terminus RD1_RS08810 PF00117 Glutamine amidotransferase class-I RD1_RS08825 PF02979 Nitrile hydratase, alpha chain RD1_RS08830 PF02211 Nitrile hydratase beta subunit RD1_RS08845 PF00709 Adenylosuccinate synthetase RD1_RS08870 PF03313 Serine dehydratase alpha chain RD1_RS08870 PF03315 Serine dehydratase beta chain RD1_RS08875 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) RD1_RS08880 PF07992 Pyridine nucleotide-disulphide oxidoreductase RD1_RS08880 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain RD1_RS08885 PF01145 SPFH domain / Band 7 family RD1_RS08885 PF12221 Bacterial membrane protein N terminal RD1_RS08890 PF01145 SPFH domain / Band 7 family RD1_RS08900 PF13180 PDZ domain RD1_RS08905 PF02811 PHP domain RD1_RS08905 PF14579 Helix-hairpin-helix motif RD1_RS08905 PF17657 Bacterial DNA polymerase III alpha subunit finger domain RD1_RS08905 PF07733 Bacterial DNA polymerase III alpha NTPase domain RD1_RS08905 PF01336 OB-fold nucleic acid binding domain RD1_RS08910 PF00111 2Fe-2S iron-sulfur cluster binding domain RD1_RS08920 PF02843 Phosphoribosylglycinamide synthetase, C domain RD1_RS08920 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain RD1_RS08920 PF02844 Phosphoribosylglycinamide synthetase, N domain RD1_RS08925 PF02601 Exonuclease VII, large subunit RD1_RS08925 PF13742 OB-fold nucleic acid binding domain RD1_RS08935 PF00448 SRP54-type protein, GTPase domain RD1_RS08935 PF02881 SRP54-type protein, helical bundle domain RD1_RS08945 PF04279 Intracellular septation protein A RD1_RS08955 PF02798 Glutathione S-transferase, N-terminal domain RD1_RS08955 PF00043 Glutathione S-transferase, C-terminal domain RD1_RS08965 PF01053 Cys/Met metabolism PLP-dependent enzyme RD1_RS08970 PF02649 Type I GTP cyclohydrolase folE2 RD1_RS08975 PF02386 Cation transport protein RD1_RS08980 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain RD1_RS08980 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain RD1_RS08980 PF00205 Thiamine pyrophosphate enzyme, central domain RD1_RS08990 PF02091 Glycyl-tRNA synthetase alpha subunit RD1_RS09000 PF05746 DALR anticodon binding domain RD1_RS09000 PF02092 Glycyl-tRNA synthetase beta subunit RD1_RS09005 PF02896 PEP-utilising enzyme, TIM barrel domain RD1_RS09005 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain RD1_RS09005 PF00391 PEP-utilising enzyme, mobile domain RD1_RS09015 PF02152 Dihydroneopterin aldolase RD1_RS09020 PF00809 Pterin binding enzyme RD1_RS09025 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I RD1_RS09025 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III RD1_RS09025 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain RD1_RS09025 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II RD1_RS09035 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain RD1_RS09035 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain RD1_RS09045 PF01037 Lrp/AsnC ligand binding domain RD1_RS09055 PF01494 FAD binding domain RD1_RS09070 PF07729 FCD domain RD1_RS09070 PF00392 Bacterial regulatory proteins, gntR family RD1_RS09080 PF00117 Glutamine amidotransferase class-I RD1_RS09080 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain RD1_RS09085 PF09424 Yqey-like protein RD1_RS09090 PF13280 WYL domain RD1_RS09090 PF08279 HTH domain RD1_RS09100 PF00115 Cytochrome C and Quinol oxidase polypeptide I RD1_RS09115 PF03099 Biotin/lipoate A/B protein ligase family RD1_RS09130 PF00005 ABC transporter RD1_RS09130 PF00664 ABC transporter transmembrane region RD1_RS09135 PF00501 AMP-binding enzyme RD1_RS09135 PF13193 AMP-binding enzyme C-terminal domain RD1_RS09145 PF00005 ABC transporter RD1_RS09145 PF08352 Oligopeptide/dipeptide transporter, C-terminal region RD1_RS09150 PF00528 Binding-protein-dependent transport system inner membrane component RD1_RS09150 PF12911 N-terminal TM domain of oligopeptide transport permease C RD1_RS09155 PF00528 Binding-protein-dependent transport system inner membrane component RD1_RS09160 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle RD1_RS09165 PF02129 X-Pro dipeptidyl-peptidase (S15 family) RD1_RS09165 PF08530 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain RD1_RS09170 PF05161 MOFRL family RD1_RS09170 PF13660 Domain of unknown function (DUF4147) RD1_RS09175 PF02580 D-Tyr-tRNA(Tyr) deacylase RD1_RS09200 PF05816 Toxic anion resistance protein (TelA) RD1_RS09210 PF01479 S4 domain RD1_RS09210 PF00849 RNA pseudouridylate synthase RD1_RS09215 PF14437 MafB19-like deaminase RD1_RS09230 PF00471 Ribosomal protein L33 RD1_RS09240 PF01510 N-acetylmuramoyl-L-alanine amidase RD1_RS09250 PF01425 Amidase RD1_RS09255 PF02686 Glu-tRNAGln amidotransferase C subunit RD1_RS09260 PF01027 Inhibitor of apoptosis-promoting Bax1 RD1_RS09270 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RD1_RS09270 PF03466 LysR substrate binding domain RD1_RS09275 PF01381 Helix-turn-helix RD1_RS09280 PF00459 Inositol monophosphatase family RD1_RS09285 PF01979 Amidohydrolase family RD1_RS09290 PF01979 Amidohydrolase family RD1_RS09295 PF03448 MgtE intracellular N domain RD1_RS09295 PF01769 Divalent cation transporter RD1_RS09295 PF00571 CBS domain RD1_RS09300 PF01812 5-formyltetrahydrofolate cyclo-ligase family RD1_RS09305 PF13277 YmdB-like protein RD1_RS09315 PF02080 TrkA-C domain RD1_RS09315 PF03600 Citrate transporter RD1_RS09325 PF03600 Citrate transporter RD1_RS09325 PF02080 TrkA-C domain RD1_RS09335 PF01709 Transcriptional regulator RD1_RS09345 PF00892 EamA-like transporter family RD1_RS09350 PF13977 BetI-type transcriptional repressor, C-terminal RD1_RS09350 PF00440 Bacterial regulatory proteins, tetR family RD1_RS09355 PF00884 Sulfatase RD1_RS09355 PF12411 Choline sulfatase enzyme C terminal RD1_RS09360 PF00171 Aldehyde dehydrogenase family RD1_RS09370 PF05199 GMC oxidoreductase RD1_RS09370 PF00732 GMC oxidoreductase RD1_RS09380 PF06114 IrrE N-terminal-like domain RD1_RS09380 PF01381 Helix-turn-helix RD1_RS09380 PF09856 Predicted transcriptional regulator (DUF2083) RD1_RS09385 PF07690 Major Facilitator Superfamily RD1_RS09390 PF01039 Carboxyl transferase domain RD1_RS09410 PF18140 Propionyl-coenzyme A carboxylase BT domain RD1_RS09410 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain RD1_RS09410 PF00364 Biotin-requiring enzyme RD1_RS09410 PF00289 Biotin carboxylase, N-terminal domain RD1_RS09410 PF02785 Biotin carboxylase C-terminal domain RD1_RS09425 PF02310 B12 binding domain RD1_RS09425 PF01642 Methylmalonyl-CoA mutase RD1_RS09440 PF00226 DnaJ domain RD1_RS09440 PF05099 Tellurite resistance protein TerB RD1_RS09450 PF02541 Ppx/GppA phosphatase family RD1_RS09455 PF13089 Polyphosphate kinase N-terminal domain RD1_RS09455 PF13090 Polyphosphate kinase C-terminal domain 2 RD1_RS09455 PF17941 Polyphosphate kinase C-terminal domain 1 RD1_RS09455 PF02503 Polyphosphate kinase middle domain RD1_RS09465 PF01594 AI-2E family transporter RD1_RS09470 PF03129 Anticodon binding domain RD1_RS09470 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) RD1_RS09480 PF12704 MacB-like periplasmic core domain RD1_RS09480 PF02687 FtsX-like permease family RD1_RS09485 PF00005 ABC transporter RD1_RS09490 PF02615 Malate/L-lactate dehydrogenase RD1_RS09510 PF13442 Cytochrome C oxidase, cbb3-type, subunit III RD1_RS09510 PF14715 N-terminal domain of cytochrome oxidase-cbb3, FixP RD1_RS09525 PF01751 Toprim domain RD1_RS09525 PF00986 DNA gyrase B subunit, carboxyl terminus RD1_RS09525 PF00204 DNA gyrase B RD1_RS09525 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RD1_RS09540 PF01554 MatE RD1_RS09550 PF01370 NAD dependent epimerase/dehydratase family RD1_RS09565 PF02771 Acyl-CoA dehydrogenase, N-terminal domain RD1_RS09565 PF02770 Acyl-CoA dehydrogenase, middle domain RD1_RS09565 PF00441 Acyl-CoA dehydrogenase, C-terminal domain RD1_RS09585 PF01416 tRNA pseudouridine synthase RD1_RS09590 PF04317 YcjX-like family, DUF463 RD1_RS09600 PF05128 Domain of unknown function (DUF697) RD1_RS09605 PF08264 Anticodon-binding domain of tRNA RD1_RS09605 PF00133 tRNA synthetases class I (I, L, M and V) RD1_RS09610 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain RD1_RS09610 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain RD1_RS09615 PF01066 CDP-alcohol phosphatidyltransferase RD1_RS09620 PF02899 Phage integrase, N-terminal SAM-like domain RD1_RS09620 PF00589 Phage integrase family RD1_RS09630 PF00923 Transaldolase/Fructose-6-phosphate aldolase RD1_RS09635 PF17764 3′ DNA-binding domain (3′BD) RD1_RS09635 PF18319 PriA DNA helicase Cys-rich region (CRR) domain RD1_RS09635 PF00270 DEAD/DEAH box helicase RD1_RS09635 PF18074 Primosomal protein N C-terminal domain RD1_RS09665 PF02075 Crossover junction endodeoxyribonuclease RuvC RD1_RS09670 PF01330 RuvA N terminal domain RD1_RS09670 PF07499 RuvA, C-terminal domain RD1_RS09675 PF05491 RuvB C-terminal winged helix domain RD1_RS09675 PF17864 RuvB AAA lid domain RD1_RS09675 PF05496 Holliday junction DNA helicase RuvB P-loop domain RD1_RS09685 PF03061 Thioesterase superfamily RD1_RS09690 PF01618 MotA/TolQ/ExbB proton channel family RD1_RS09695 PF02472 Biopolymer transport protein ExbD/TolR RD1_RS09705 PF07676 WD40-like Beta Propeller Repeat RD1_RS09705 PF04052 TolB amino-terminal domain RD1_RS09710 PF00691 OmpA family RD1_RS09720 PF01171 PP-loop family RD1_RS09725 PF00004 ATPase family associated with various cellular activities (AAA) RD1_RS09725 PF17862 AAA+ lid domain RD1_RS09725 PF06480 FtsH Extracellular RD1_RS09725 PF01434 Peptidase family M41 RD1_RS09740 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain RD1_RS09740 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain RD1_RS09755 PF00270 DEAD/DEAH box helicase RD1_RS09755 PF08494 DEAD/H associated RD1_RS09755 PF00271 Helicase conserved C-terminal domain RD1_RS09790 PF00437 Type II/IV secretion system protein RD1_RS09805 PF00263 Bacterial type II and III secretion system protein RD1_RS09805 PF13629 Pilus formation protein N terminal region RD1_RS09805 PF04972 BON domain RD1_RS09825 PF00497 Bacterial extracellular solute-binding proteins, family 3 RD1_RS09825 PF01464 Transglycosylase SLT domain RD1_RS09830 PF01144 Coenzyme A transferase RD1_RS09835 PF13581 Histidine kinase-like ATPase domain RD1_RS09835 PF13426 PAS domain RD1_RS09835 PF07568 Histidine kinase RD1_RS09840 PF01144 Coenzyme A transferase RD1_RS09845 PF13368 Topoisomerase C-terminal repeat RD1_RS09845 PF01396 Topoisomerase DNA binding C4 zinc finger RD1_RS09845 PF01751 Toprim domain RD1_RS09845 PF01131 DNA topoisomerase RD1_RS09850 PF02481 DNA recombination-mediator protein A RD1_RS09850 PF17782 DprA winged helix domain RD1_RS09855 PF01523 Putative modulator of DNA gyrase RD1_RS09860 PF02790 Cytochrome C oxidase subunit II, transmembrane domain RD1_RS09860 PF00116 Cytochrome C oxidase subunit II, periplasmic domain RD1_RS09865 PF01040 UbiA prenyltransferase family RD1_RS09875 PF04442 Cytochrome c oxidase assembly protein CtaG/Cox11 RD1_RS09880 PF00510 Cytochrome c oxidase subunit III RD1_RS09885 PF02104 SURF1 family RD1_RS09890 PF00291 Pyridoxal-phosphate dependent enzyme RD1_RS09890 PF14821 Threonine synthase N terminus RD1_RS09895 PF00675 Insulinase (Peptidase family M16) RD1_RS09895 PF05193 Peptidase M16 inactive domain RD1_RS09910 PF01565 FAD binding domain RD1_RS09910 PF02913 FAD linked oxidases, C-terminal domain RD1_RS09920 PF00156 Phosphoribosyl transferase domain RD1_RS09925 PF01810 LysE type translocator RD1_RS09930 PF01048 Phosphorylase superfamily RD1_RS09935 PF01740 STAS domain RD1_RS09935 PF00916 Sulfate permease family RD1_RS09965 PF01842 ACT domain RD1_RS09965 PF00696 Amino acid kinase family RD1_RS09965 PF13840 ACT domain RD1_RS09970 PF02896 PEP-utilising enzyme, TIM barrel domain RD1_RS09970 PF00391 PEP-utilising enzyme, mobile domain RD1_RS09970 PF05524 PEP-utilising enzyme, N-terminal RD1_RS09975 PF05145 Transition state regulatory protein AbrB RD1_RS09985 PF00672 HAMP domain RD1_RS09985 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain RD1_RS09990 PF00005 ABC transporter RD1_RS09995 PF12399 Branched-chain amino acid ATP-binding cassette transporter RD1_RS09995 PF00005 ABC transporter RD1_RS10000 PF02653 Branched-chain amino acid transport system / permease component RD1_RS10005 PF02653 Branched-chain amino acid transport system / permease component RD1_RS10020 PF00465 Iron-containing alcohol dehydrogenase RD1_RS10025 PF00171 Aldehyde dehydrogenase family RD1_RS10030 PF00120 Glutamine synthetase, catalytic domain RD1_RS10030 PF03951 Glutamine synthetase, beta-Grasp domain RD1_RS10040 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component RD1_RS10065 PF07685 CobB/CobQ-like glutamine amidotransferase domain RD1_RS10070 PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP RD1_RS10080 PF00528 Binding-protein-dependent transport system inner membrane component RD1_RS10085 PF00005 ABC transporter RD1_RS10100 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component RD1_RS10110 PF00724 NADH:flavin oxidoreductase / NADH oxidase family RD1_RS10115 PF05199 GMC oxidoreductase RD1_RS10115 PF00732 GMC oxidoreductase RD1_RS10125 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily RD1_RS10135 PF03466 LysR substrate binding domain RD1_RS10135 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RD1_RS10140 PF00141 Peroxidase RD1_RS10150 PF08546 Ketopantoate reductase PanE/ApbA C terminal RD1_RS10150 PF02558 Ketopantoate reductase PanE/ApbA RD1_RS10155 PF13193 AMP-binding enzyme C-terminal domain RD1_RS10155 PF00501 AMP-binding enzyme RD1_RS10160 PF01970 Tripartite tricarboxylate transporter TctA family RD1_RS10175 PF06114 IrrE N-terminal-like domain RD1_RS10175 PF01381 Helix-turn-helix RD1_RS10175 PF09856 Predicted transcriptional regulator (DUF2083) RD1_RS10180 PF03971 Monomeric isocitrate dehydrogenase RD1_RS10190 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion RD1_RS10200 PF00459 Inositol monophosphatase family RD1_RS10205 PF00485 Phosphoribulokinase / Uridine kinase family RD1_RS10210 PF00005 ABC transporter RD1_RS10215 PF02653 Branched-chain amino acid transport system / permease component RD1_RS10220 PF13407 Periplasmic binding protein domain RD1_RS10240 PF00563 EAL domain RD1_RS10240 PF00990 Diguanylate cyclase, GGDEF domain RD1_RS10240 PF03707 Bacterial signalling protein N terminal repeat RD1_RS10250 PF00005 ABC transporter RD1_RS10250 PF08352 Oligopeptide/dipeptide transporter, C-terminal region RD1_RS10255 PF00005 ABC transporter RD1_RS10255 PF08352 Oligopeptide/dipeptide transporter, C-terminal region RD1_RS10260 PF12911 N-terminal TM domain of oligopeptide transport permease C RD1_RS10260 PF00528 Binding-protein-dependent transport system inner membrane component RD1_RS10265 PF00528 Binding-protein-dependent transport system inner membrane component RD1_RS10270 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle RD1_RS10275 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle RD1_RS10285 PF13356 Arm DNA-binding domain RD1_RS10285 PF00589 Phage integrase family RD1_RS10305 PF02384 N-6 DNA Methylase RD1_RS10305 PF12161 HsdM N-terminal domain RD1_RS10310 PF01420 Type I restriction modification DNA specificity domain RD1_RS10315 PF04851 Type III restriction enzyme, res subunit RD1_RS10315 PF08463 EcoEI R protein C-terminal RD1_RS10315 PF13588 Type I restriction enzyme R protein N terminus (HSDR_N) RD1_RS10315 PF00271 Helicase conserved C-terminal domain RD1_RS10325 PF01593 Flavin containing amine oxidoreductase RD1_RS10330 PF00005 ABC transporter RD1_RS10335 PF12704 MacB-like periplasmic core domain RD1_RS10335 PF02687 FtsX-like permease family RD1_RS10345 PF00441 Acyl-CoA dehydrogenase, C-terminal domain RD1_RS10345 PF02770 Acyl-CoA dehydrogenase, middle domain RD1_RS10345 PF02771 Acyl-CoA dehydrogenase, N-terminal domain RD1_RS10350 PF01339 CheB methylesterase RD1_RS10350 PF00072 Response regulator receiver domain RD1_RS10355 PF03975 CheD chemotactic sensory transduction RD1_RS10360 PF13276 HTH-like domain RD1_RS10360 PF13683 Integrase core domain RD1_RS10385 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RD1_RS10385 PF00512 His Kinase A (phospho-acceptor) domain RD1_RS10385 PF00672 HAMP domain RD1_RS10395 PF00586 AIR synthase related protein, N-terminal domain RD1_RS10395 PF02769 AIR synthase related protein, C-terminal domain RD1_RS10400 PF00551 Formyl transferase RD1_RS10405 PF01612 3'-5' exonuclease RD1_RS10405 PF00570 HRDC domain RD1_RS10415 PF02657 Fe-S metabolism associated domain RD1_RS10425 PF02310 B12 binding domain RD1_RS10425 PF02607 B12 binding domain RD1_RS10430 PF02607 B12 binding domain RD1_RS10430 PF00809 Pterin binding enzyme RD1_RS10430 PF02574 Homocysteine S-methyltransferase RD1_RS10430 PF02965 Vitamin B12 dependent methionine synthase, activation domain RD1_RS10430 PF02310 B12 binding domain RD1_RS10440 PF01259 SAICAR synthetase RD1_RS10445 PF02700 Phosphoribosylformylglycinamidine (FGAM) synthase RD1_RS10455 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RD1_RS10455 PF00512 His Kinase A (phospho-acceptor) domain RD1_RS10455 PF02743 Cache domain RD1_RS10460 PF02954 Bacterial regulatory protein, Fis family RD1_RS10460 PF00072 Response regulator receiver domain RD1_RS10460 PF00158 Sigma-54 interaction domain RD1_RS10465 PF12111 Polyribonucleotide phosphorylase C terminal RD1_RS10465 PF10150 Ribonuclease E/G family RD1_RS10465 PF00575 S1 RNA binding domain RD1_RS10470 PF01206 Sulfurtransferase TusA RD1_RS10475 PF02683 Cytochrome C biogenesis protein transmembrane region RD1_RS10480 PF00274 Fructose-bisphosphate aldolase class-I RD1_RS10495 PF10415 Fumarase C C-terminus RD1_RS10495 PF00206 Lyase RD1_RS10510 PF02417 Chromate transporter RD1_RS10530 PF00392 Bacterial regulatory proteins, gntR family RD1_RS10530 PF07729 FCD domain RD1_RS10550 PF01571 Aminomethyltransferase folate-binding domain RD1_RS10550 PF08669 Glycine cleavage T-protein C-terminal barrel domain RD1_RS10555 PF00107 Zinc-binding dehydrogenase RD1_RS10560 PF02028 BCCT, betaine/carnitine/choline family transporter RD1_RS10565 PF02028 BCCT, betaine/carnitine/choline family transporter RD1_RS10570 PF00266 Aminotransferase class-V RD1_RS10575 PF00875 DNA photolyase RD1_RS10575 PF03441 FAD binding domain of DNA photolyase RD1_RS10590 PF00293 NUDIX domain RD1_RS10595 PF00291 Pyridoxal-phosphate dependent enzyme RD1_RS10595 PF00571 CBS domain RD1_RS10600 PF12794 Mechanosensitive ion channel inner membrane domain 1 RD1_RS10600 PF12795 Mechanosensitive ion channel porin domain RD1_RS10600 PF00924 Mechanosensitive ion channel RD1_RS10615 PF00403 Heavy-metal-associated domain RD1_RS10620 PF09278 MerR, DNA binding RD1_RS10620 PF00376 MerR family regulatory protein RD1_RS10625 PF07732 Multicopper oxidase RD1_RS10625 PF07731 Multicopper oxidase RD1_RS10625 PF00394 Multicopper oxidase RD1_RS10625 PF10518 TAT (twin-arginine translocation) pathway signal sequence RD1_RS10635 PF01408 Oxidoreductase family, NAD-binding Rossmann fold RD1_RS10635 PF02894 Oxidoreductase family, C-terminal alpha/beta domain RD1_RS10645 PF00296 Luciferase-like monooxygenase RD1_RS10650 PF00248 Aldo/keto reductase family RD1_RS10655 PF01613 Flavin reductase like domain RD1_RS10665 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component RD1_RS10665 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component RD1_RS10670 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component RD1_RS10670 PF03480 Bacterial extracellular solute-binding protein, family 7 RD1_RS10685 PF00232 Glycosyl hydrolase family 1 RD1_RS10690 PF00356 Bacterial regulatory proteins, lacI family RD1_RS10695 PF01547 Bacterial extracellular solute-binding protein RD1_RS10700 PF00528 Binding-protein-dependent transport system inner membrane component RD1_RS10710 PF00128 Alpha amylase, catalytic domain RD1_RS10715 PF17912 MalK OB fold domain RD1_RS10715 PF00005 ABC transporter RD1_RS10715 PF03459 TOBE domain RD1_RS10725 PF07244 Surface antigen variable number repeat RD1_RS10725 PF17243 POTRA domain TamA domain 1 RD1_RS10725 PF01103 Surface antigen RD1_RS10735 PF01613 Flavin reductase like domain RD1_RS10740 PF16177 Acetyl-coenzyme A synthetase N-terminus RD1_RS10740 PF00501 AMP-binding enzyme RD1_RS10740 PF13193 AMP-binding enzyme C-terminal domain RD1_RS10755 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component RD1_RS10760 PF01494 FAD binding domain RD1_RS10765 PF00202 Aminotransferase class-III RD1_RS10785 PF00534 Glycosyl transferases group 1 RD1_RS10785 PF13439 Glycosyltransferase Family 4 RD1_RS10790 PF00528 Binding-protein-dependent transport system inner membrane component RD1_RS10795 PF00005 ABC transporter RD1_RS10820 PF04264 YceI-like domain RD1_RS10835 PF00462 Glutaredoxin RD1_RS10865 PF00355 Rieske [2Fe-2S] domain RD1_RS10875 PF01522 Polysaccharide deacetylase RD1_RS10880 PF00005 ABC transporter RD1_RS10880 PF08402 TOBE domain RD1_RS10890 PF00528 Binding-protein-dependent transport system inner membrane component RD1_RS10900 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RD1_RS10900 PF03466 LysR substrate binding domain RD1_RS10905 PF00156 Phosphoribosyl transferase domain RD1_RS10940 PF02653 Branched-chain amino acid transport system / permease component RD1_RS10945 PF00005 ABC transporter RD1_RS10950 PF01636 Phosphotransferase enzyme family RD1_RS10955 PF01008 Initiation factor 2 subunit family RD1_RS10960 PF04198 Putative sugar-binding domain RD1_RS10965 PF07969 Amidohydrolase family RD1_RS10980 PF00005 ABC transporter RD1_RS10985 PF00005 ABC transporter RD1_RS10990 PF06007 Phosphonate metabolism protein PhnJ RD1_RS10995 PF05861 Bacterial phosphonate metabolism protein (PhnI) RD1_RS11000 PF05845 Bacterial phosphonate metabolism protein (PhnH) RD1_RS11005 PF06754 Phosphonate metabolism protein PhnG RD1_RS11010 PF07702 UTRA domain RD1_RS11010 PF00392 Bacterial regulatory proteins, gntR family RD1_RS11020 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain RD1_RS11020 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain RD1_RS11035 PF00528 Binding-protein-dependent transport system inner membrane component RD1_RS11045 PF00005 ABC transporter RD1_RS11050 PF00449 Urease alpha-subunit, N-terminal domain RD1_RS11050 PF01979 Amidohydrolase family RD1_RS11055 PF01177 Asp/Glu/Hydantoin racemase RD1_RS11060 PF01425 Amidase RD1_RS11065 PF00528 Binding-protein-dependent transport system inner membrane component RD1_RS11070 PF00528 Binding-protein-dependent transport system inner membrane component RD1_RS11075 PF08402 TOBE domain RD1_RS11075 PF00005 ABC transporter RD1_RS11085 PF00392 Bacterial regulatory proteins, gntR family RD1_RS11085 PF07729 FCD domain RD1_RS11090 PF00528 Binding-protein-dependent transport system inner membrane component RD1_RS11095 PF00528 Binding-protein-dependent transport system inner membrane component RD1_RS11100 PF08402 TOBE domain RD1_RS11100 PF00005 ABC transporter RD1_RS11110 PF08220 DeoR-like helix-turn-helix domain RD1_RS11110 PF00455 DeoR C terminal sensor domain RD1_RS11145 PF01979 Amidohydrolase family RD1_RS11150 PF08402 TOBE domain RD1_RS11150 PF00005 ABC transporter RD1_RS11160 PF00528 Binding-protein-dependent transport system inner membrane component RD1_RS11165 PF00528 Binding-protein-dependent transport system inner membrane component RD1_RS11180 PF13443 Cro/C1-type HTH DNA-binding domain RD1_RS11210 PF07690 Major Facilitator Superfamily RD1_RS11215 PF07690 Major Facilitator Superfamily RD1_RS11220 PF00384 Molybdopterin oxidoreductase RD1_RS11220 PF01568 Molydopterin dinucleotide binding domain RD1_RS11220 PF14710 Respiratory nitrate reductase alpha N-terminal RD1_RS11225 PF13247 4Fe-4S dicluster domain RD1_RS11225 PF14711 Respiratory nitrate reductase beta C-terminal RD1_RS11230 PF02613 Nitrate reductase delta subunit RD1_RS11235 PF02665 Nitrate reductase gamma subunit RD1_RS11255 PF03453 MoeA N-terminal region (domain I and II) RD1_RS11255 PF03454 MoeA C-terminal region (domain IV) RD1_RS11255 PF00994 Probable molybdopterin binding domain RD1_RS11260 PF00005 ABC transporter RD1_RS11260 PF03459 TOBE domain RD1_RS11260 PF10649 Protein of unknown function (DUF2478) RD1_RS11265 PF00205 Thiamine pyrophosphate enzyme, central domain RD1_RS11265 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain RD1_RS11265 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain RD1_RS11270 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase RD1_RS11270 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain RD1_RS11275 PF00027 Cyclic nucleotide-binding domain RD1_RS11275 PF13545 Crp-like helix-turn-helix domain RD1_RS11280 PF02308 MgtC family RD1_RS11285 PF00924 Mechanosensitive ion channel RD1_RS11310 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RD1_RS11310 PF12282 Signal transduction histidine kinase RD1_RS11310 PF07568 Histidine kinase RD1_RS11315 PF04542 Sigma-70 region 2 RD1_RS11315 PF08281 Sigma-70, region 4 RD1_RS11325 PF00072 Response regulator receiver domain RD1_RS11330 PF02254 TrkA-N domain RD1_RS11330 PF02080 TrkA-C domain RD1_RS11335 PF02386 Cation transport protein RD1_RS11340 PF01226 Formate/nitrite transporter RD1_RS11355 PF01554 MatE RD1_RS11380 PF01594 AI-2E family transporter RD1_RS11430 PF13361 UvrD-like helicase C-terminal domain RD1_RS11430 PF00580 UvrD/REP helicase N-terminal domain RD1_RS11430 PF12462 DNA helicase IV / RNA helicase N terminal RD1_RS11435 PF13683 Integrase core domain RD1_RS11435 PF13276 HTH-like domain RD1_RS11440 PF01527 Transposase RD1_RS11470 PF00440 Bacterial regulatory proteins, tetR family RD1_RS11505 PF07992 Pyridine nucleotide-disulphide oxidoreductase RD1_RS11520 PF01207 Dihydrouridine synthase (Dus) RD1_RS11530 PF00459 Inositol monophosphatase family RD1_RS11540 PF00171 Aldehyde dehydrogenase family RD1_RS11540 PF01619 Proline dehydrogenase RD1_RS11540 PF18327 Proline utilization A proline dehydrogenase N-terminal domain RD1_RS11540 PF14850 DNA-binding domain of Proline dehydrogenase RD1_RS11545 PF01037 Lrp/AsnC ligand binding domain RD1_RS11560 PF00672 HAMP domain RD1_RS11560 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain RD1_RS11575 PF09334 tRNA synthetases class I (M) RD1_RS11585 PF04264 YceI-like domain RD1_RS11595 PF00248 Aldo/keto reductase family RD1_RS11600 PF05853 beta-keto acid cleavage enzyme RD1_RS11610 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain RD1_RS11610 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain RD1_RS11630 PF00990 Diguanylate cyclase, GGDEF domain RD1_RS11630 PF00072 Response regulator receiver domain RD1_RS11655 PF00990 Diguanylate cyclase, GGDEF domain RD1_RS11655 PF00563 EAL domain RD1_RS11655 PF03707 Bacterial signalling protein N terminal repeat RD1_RS11660 PF00873 AcrB/AcrD/AcrF family RD1_RS11665 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion RD1_RS11680 PF02272 DHHA1 domain RD1_RS11680 PF01368 DHH family RD1_RS11680 PF17768 RecJ OB domain RD1_RS11685 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded RD1_RS11690 PF03447 Homoserine dehydrogenase, NAD binding domain RD1_RS11690 PF00742 Homoserine dehydrogenase RD1_RS11690 PF01842 ACT domain RD1_RS11700 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase RD1_RS11700 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase RD1_RS11705 PF02403 Seryl-tRNA synthetase N-terminal domain RD1_RS11705 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) RD1_RS11710 PF00089 Trypsin RD1_RS11715 PF02699 Preprotein translocase subunit RD1_RS11720 PF02355 Protein export membrane protein RD1_RS11725 PF07549 SecD/SecF GG Motif RD1_RS11725 PF02355 Protein export membrane protein RD1_RS11730 PF04430 Protein of unknown function (DUF498/DUF598) RD1_RS11735 PF00005 ABC transporter RD1_RS11740 PF03379 CcmB protein RD1_RS11745 PF01578 Cytochrome C assembly protein RD1_RS11750 PF04995 Heme exporter protein D (CcmD) RD1_RS11755 PF08534 Redoxin RD1_RS11760 PF00005 ABC transporter RD1_RS11760 PF17912 MalK OB fold domain RD1_RS11775 PF00330 Aconitase family (aconitate hydratase) RD1_RS11775 PF00694 Aconitase C-terminal domain RD1_RS11790 PF01706 FliG C-terminal domain RD1_RS11790 PF14841 FliG middle domain RD1_RS11790 PF14842 FliG N-terminal domain RD1_RS11795 PF00206 Lyase RD1_RS11795 PF10397 Adenylosuccinate lyase C-terminus RD1_RS11805 PF02632 BioY family RD1_RS11830 PF00557 Metallopeptidase family M24 RD1_RS11840 PF00120 Glutamine synthetase, catalytic domain RD1_RS11840 PF03951 Glutamine synthetase, beta-Grasp domain RD1_RS11845 PF00543 Nitrogen regulatory protein P-II RD1_RS11850 PF03853 YjeF-related protein N-terminus RD1_RS11855 PF03853 YjeF-related protein N-terminus RD1_RS11855 PF01256 Carbohydrate kinase RD1_RS11870 PF00436 Single-strand binding protein family RD1_RS11875 PF01464 Transglycosylase SLT domain RD1_RS11880 PF00005 ABC transporter RD1_RS11880 PF08352 Oligopeptide/dipeptide transporter, C-terminal region RD1_RS11885 PF00528 Binding-protein-dependent transport system inner membrane component RD1_RS11885 PF12911 N-terminal TM domain of oligopeptide transport permease C RD1_RS11890 PF00528 Binding-protein-dependent transport system inner membrane component RD1_RS11905 PF00696 Amino acid kinase family RD1_RS11910 PF01765 Ribosome recycling factor RD1_RS11915 PF01255 Putative undecaprenyl diphosphate synthase RD1_RS11925 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase RD1_RS11925 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain RD1_RS11925 PF13288 DXP reductoisomerase C-terminal domain RD1_RS11930 PF17820 PDZ domain RD1_RS11930 PF02163 Peptidase family M50 RD1_RS11935 PF01103 Surface antigen RD1_RS11935 PF07244 Surface antigen variable number repeat RD1_RS11945 PF07977 FabA-like domain RD1_RS11950 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 RD1_RS11950 PF00132 Bacterial transferase hexapeptide (six repeats) RD1_RS11955 PF06230 LpxI C-terminal domain RD1_RS11955 PF17930 LpxI N-terminal domain RD1_RS11960 PF02684 Lipid-A-disaccharide synthetase RD1_RS11975 PF00072 Response regulator receiver domain RD1_RS11975 PF00486 Transcriptional regulatory protein, C terminal RD1_RS11980 PF00533 BRCA1 C Terminus (BRCT) domain RD1_RS11980 PF01653 NAD-dependent DNA ligase adenylation domain RD1_RS11980 PF03120 NAD-dependent DNA ligase OB-fold domain RD1_RS11980 PF03119 NAD-dependent DNA ligase C4 zinc finger domain RD1_RS11980 PF12826 Helix-hairpin-helix motif RD1_RS11985 PF00270 DEAD/DEAH box helicase RD1_RS11985 PF00271 Helicase conserved C-terminal domain RD1_RS11985 PF17191 RecG wedge domain RD1_RS11995 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain RD1_RS12005 PF01502 Phosphoribosyl-AMP cyclohydrolase RD1_RS12010 PF00749 tRNA synthetases class I (E and Q), catalytic domain RD1_RS12020 PF01134 Glucose inhibited division protein A RD1_RS12030 PF00380 Ribosomal protein S9/S16 RD1_RS12035 PF00572 Ribosomal protein L13 RD1_RS12060 PF03734 L,D-transpeptidase catalytic domain RD1_RS12060 PF01471 Putative peptidoglycan binding domain RD1_RS12065 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD RD1_RS12065 PF00132 Bacterial transferase hexapeptide (six repeats) RD1_RS12070 PF00550 Phosphopantetheine attachment site RD1_RS12075 PF00109 Beta-ketoacyl synthase, N-terminal domain RD1_RS12075 PF02801 Beta-ketoacyl synthase, C-terminal domain RD1_RS12085 PF05872 Bacterial protein of unknown function (DUF853) RD1_RS12095 PF02653 Branched-chain amino acid transport system / permease component RD1_RS12100 PF00005 ABC transporter RD1_RS12105 PF00005 ABC transporter RD1_RS12105 PF12399 Branched-chain amino acid ATP-binding cassette transporter RD1_RS12110 PF13458 Periplasmic binding protein RD1_RS12115 PF07995 Glucose / Sorbosone dehydrogenase RD1_RS12120 PF12833 Helix-turn-helix domain RD1_RS12120 PF01965 DJ-1/PfpI family RD1_RS12125 PF01474 Class-II DAHP synthetase family RD1_RS12135 PF03755 YicC-like family, N-terminal region RD1_RS12135 PF08340 Domain of unknown function (DUF1732) RD1_RS12140 PF00625 Guanylate kinase RD1_RS12145 PF00132 Bacterial transferase hexapeptide (six repeats) RD1_RS12150 PF01053 Cys/Met metabolism PLP-dependent enzyme RD1_RS12155 PF16736 Single Cache-like RD1_RS12155 PF00512 His Kinase A (phospho-acceptor) domain RD1_RS12155 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RD1_RS12155 PF00989 PAS fold RD1_RS12165 PF00528 Binding-protein-dependent transport system inner membrane component RD1_RS12170 PF00528 Binding-protein-dependent transport system inner membrane component RD1_RS12175 PF00005 ABC transporter RD1_RS12180 PF01895 PhoU domain RD1_RS12185 PF00486 Transcriptional regulatory protein, C terminal RD1_RS12185 PF00072 Response regulator receiver domain RD1_RS12200 PF01220 Dehydroquinase class II RD1_RS12205 PF00889 Elongation factor TS RD1_RS12210 PF00318 Ribosomal protein S2 RD1_RS12230 PF10090 Histidine phosphotransferase C-terminal domain RD1_RS12235 PF00171 Aldehyde dehydrogenase family RD1_RS12240 PF01472 PUA domain RD1_RS12240 PF00696 Amino acid kinase family RD1_RS12245 PF01018 GTP1/OBG RD1_RS12245 PF01926 50S ribosome-binding GTPase RD1_RS12255 PF01810 LysE type translocator RD1_RS12260 PF01016 Ribosomal L27 protein RD1_RS12265 PF00829 Ribosomal prokaryotic L21 protein RD1_RS12305 PF01032 FecCD transport family RD1_RS12310 PF00005 ABC transporter RD1_RS12315 PF00127 Copper binding proteins, plastocyanin/azurin family RD1_RS12320 PF00561 alpha/beta hydrolase fold RD1_RS12345 PF04960 Glutaminase RD1_RS12350 PF00282 Pyridoxal-dependent decarboxylase conserved domain RD1_RS12360 PF00672 HAMP domain RD1_RS12360 PF00211 Adenylate and Guanylate cyclase catalytic domain RD1_RS12360 PF02743 Cache domain RD1_RS12370 PF00266 Aminotransferase class-V RD1_RS12385 PF01458 Uncharacterized protein family (UPF0051) RD1_RS12390 PF00005 ABC transporter RD1_RS12395 PF01906 Putative heavy-metal-binding RD1_RS12400 PF01458 Uncharacterized protein family (UPF0051) RD1_RS12405 PF00266 Aminotransferase class-V RD1_RS12410 PF02082 Transcriptional regulator RD1_RS12415 PF02129 X-Pro dipeptidyl-peptidase (S15 family) RD1_RS12430 PF00180 Isocitrate/isopropylmalate dehydrogenase RD1_RS12435 PF00893 Small Multidrug Resistance protein RD1_RS12440 PF03144 Elongation factor Tu domain 2 RD1_RS12440 PF00679 Elongation factor G C-terminus RD1_RS12440 PF00009 Elongation factor Tu GTP binding domain RD1_RS12450 PF01411 tRNA synthetases class II (A) RD1_RS12450 PF02272 DHHA1 domain RD1_RS12450 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain RD1_RS12455 PF00154 recA bacterial DNA recombination protein RD1_RS12460 PF00512 His Kinase A (phospho-acceptor) domain RD1_RS12460 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RD1_RS12460 PF13188 PAS domain RD1_RS12460 PF08448 PAS fold RD1_RS12460 PF00072 Response regulator receiver domain RD1_RS12465 PF01029 NusB family RD1_RS12465 PF01189 16S rRNA methyltransferase RsmB/F RD1_RS12470 PF00478 IMP dehydrogenase / GMP reductase domain RD1_RS12470 PF00571 CBS domain RD1_RS12475 PF00491 Arginase family RD1_RS12495 PF00342 Phosphoglucose isomerase RD1_RS12500 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase RD1_RS12505 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain RD1_RS12505 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain RD1_RS12515 PF06233 Usg-like family RD1_RS12520 PF03989 DNA gyrase C-terminal domain, beta-propeller RD1_RS12520 PF00521 DNA gyrase/topoisomerase IV, subunit A RD1_RS12525 PF02074 Carboxypeptidase Taq (M32) metallopeptidase RD1_RS12530 PF02628 Cytochrome oxidase assembly protein RD1_RS12540 PF02581 Thiamine monophosphate synthase RD1_RS12560 PF04227 Indigoidine synthase A like protein RD1_RS12580 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle RD1_RS12590 PF13193 AMP-binding enzyme C-terminal domain RD1_RS12590 PF00501 AMP-binding enzyme RD1_RS12600 PF07690 Major Facilitator Superfamily RD1_RS12605 PF03461 TRCF domain RD1_RS12605 PF02559 CarD-like/TRCF domain RD1_RS12605 PF17757 UvrB interaction domain RD1_RS12605 PF00271 Helicase conserved C-terminal domain RD1_RS12605 PF00270 DEAD/DEAH box helicase RD1_RS12615 PF00490 Delta-aminolevulinic acid dehydratase RD1_RS12625 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase RD1_RS12625 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase RD1_RS12630 PF01804 Penicillin amidase RD1_RS12635 PF00849 RNA pseudouridylate synthase RD1_RS12640 PF01926 50S ribosome-binding GTPase RD1_RS12640 PF16360 GTP-binding GTPase Middle Region RD1_RS12640 PF13167 GTP-binding GTPase N-terminal RD1_RS12645 PF17209 Hfq protein RD1_RS12650 PF02386 Cation transport protein RD1_RS12655 PF02080 TrkA-C domain RD1_RS12655 PF02254 TrkA-N domain RD1_RS12670 PF00158 Sigma-54 interaction domain RD1_RS12670 PF00072 Response regulator receiver domain RD1_RS12670 PF02954 Bacterial regulatory protein, Fis family RD1_RS12675 PF00672 HAMP domain RD1_RS12675 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RD1_RS12675 PF00512 His Kinase A (phospho-acceptor) domain RD1_RS12675 PF00989 PAS fold RD1_RS12680 PF02954 Bacterial regulatory protein, Fis family RD1_RS12680 PF00072 Response regulator receiver domain RD1_RS12680 PF14532 Sigma-54 interaction domain RD1_RS12685 PF00512 His Kinase A (phospho-acceptor) domain RD1_RS12685 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RD1_RS12690 PF01207 Dihydrouridine synthase (Dus) RD1_RS12695 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase RD1_RS12700 PF02542 YgbB family RD1_RS12705 PF04608 Phosphatidylglycerophosphatase A RD1_RS12710 PF02464 Competence-damaged protein RD1_RS12715 PF03364 Polyketide cyclase / dehydrase and lipid transport RD1_RS12720 PF00156 Phosphoribosyl transferase domain RD1_RS12730 PF04055 Radical SAM superfamily RD1_RS12730 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family RD1_RS12755 PF00117 Glutamine amidotransferase class-I RD1_RS12755 PF00958 GMP synthase C terminal domain RD1_RS12760 PF00892 EamA-like transporter family RD1_RS12780 PF04204 Homoserine O-succinyltransferase RD1_RS12785 PF00561 alpha/beta hydrolase fold RD1_RS12790 PF03976 Polyphosphate kinase 2 (PPK2) RD1_RS12795 PF00440 Bacterial regulatory proteins, tetR family RD1_RS12795 PF13977 BetI-type transcriptional repressor, C-terminal RD1_RS12805 PF06055 Exopolysaccharide synthesis, ExoD RD1_RS12815 PF01494 FAD binding domain RD1_RS12820 PF01258 Prokaryotic dksA/traR C4-type zinc finger RD1_RS12825 PF07724 AAA domain (Cdc48 subfamily) RD1_RS12825 PF17871 AAA lid domain RD1_RS12825 PF00004 ATPase family associated with various cellular activities (AAA) RD1_RS12825 PF10431 C-terminal, D2-small domain, of ClpB protein RD1_RS12825 PF02861 Clp amino terminal domain, pathogenicity island component RD1_RS12830 PF00583 Acetyltransferase (GNAT) family RD1_RS12860 PF17785 PUA-like domain RD1_RS12860 PF10672 S-adenosylmethionine-dependent methyltransferase RD1_RS12870 PF08335 GlnD PII-uridylyltransferase RD1_RS12870 PF03710 Glutamate-ammonia ligase adenylyltransferase RD1_RS12885 PF04376 Arginine-tRNA-protein transferase, N terminus RD1_RS12885 PF04377 Arginine-tRNA-protein transferase, C terminus RD1_RS12890 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component RD1_RS12900 PF03480 Bacterial extracellular solute-binding protein, family 7 RD1_RS12905 PF07730 Histidine kinase RD1_RS12905 PF17200 Single Cache domain 2 RD1_RS12910 PF00072 Response regulator receiver domain RD1_RS12910 PF00196 Bacterial regulatory proteins, luxR family RD1_RS12920 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain RD1_RS12920 PF00205 Thiamine pyrophosphate enzyme, central domain RD1_RS12920 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain RD1_RS12930 PF10369 Small subunit of acetolactate synthase RD1_RS12930 PF01842 ACT domain RD1_RS12945 PF00355 Rieske [2Fe-2S] domain RD1_RS12945 PF00848 Ring hydroxylating alpha subunit (catalytic domain) RD1_RS12960 PF00472 RF-1 domain RD1_RS12960 PF03462 PCRF domain RD1_RS12965 PF00905 Penicillin binding protein transpeptidase domain RD1_RS12965 PF00912 Transglycosylase RD1_RS12965 PF17092 Penicillin-binding protein OB-like domain RD1_RS12970 PF01520 N-acetylmuramoyl-L-alanine amidase RD1_RS12970 PF11741 AMIN domain RD1_RS12975 PF00155 Aminotransferase class I and II RD1_RS12990 PF04551 GcpE protein RD1_RS13000 PF00155 Aminotransferase class I and II RD1_RS13005 PF07687 Peptidase dimerisation domain RD1_RS13005 PF01546 Peptidase family M20/M25/M40 RD1_RS13010 PF00561 alpha/beta hydrolase fold RD1_RS13020 PF05726 Pirin C-terminal cupin domain RD1_RS13020 PF02678 Pirin RD1_RS13035 PF00300 Histidine phosphatase superfamily (branch 1) RD1_RS13040 PF10073 Uncharacterized protein conserved in bacteria (DUF2312) RD1_RS13060 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RD1_RS13060 PF00512 His Kinase A (phospho-acceptor) domain RD1_RS13060 PF13426 PAS domain RD1_RS13060 PF00672 HAMP domain RD1_RS13070 PF00072 Response regulator receiver domain RD1_RS13070 PF00486 Transcriptional regulatory protein, C terminal RD1_RS13085 PF02653 Branched-chain amino acid transport system / permease component RD1_RS13095 PF12399 Branched-chain amino acid ATP-binding cassette transporter RD1_RS13095 PF00005 ABC transporter RD1_RS13100 PF00005 ABC transporter RD1_RS13110 PF13193 AMP-binding enzyme C-terminal domain RD1_RS13110 PF00501 AMP-binding enzyme RD1_RS13115 PF00364 Biotin-requiring enzyme RD1_RS13120 PF00289 Biotin carboxylase, N-terminal domain RD1_RS13120 PF02785 Biotin carboxylase C-terminal domain RD1_RS13120 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain RD1_RS13125 PF03588 Leucyl/phenylalanyl-tRNA protein transferase RD1_RS13150 PF10431 C-terminal, D2-small domain, of ClpB protein RD1_RS13150 PF06689 ClpX C4-type zinc finger RD1_RS13150 PF07724 AAA domain (Cdc48 subfamily) RD1_RS13155 PF00574 Clp protease RD1_RS13165 PF17912 MalK OB fold domain RD1_RS13165 PF00005 ABC transporter RD1_RS13170 PF01614 Bacterial transcriptional regulator RD1_RS13170 PF09339 IclR helix-turn-helix domain RD1_RS13180 PF00528 Binding-protein-dependent transport system inner membrane component RD1_RS13185 PF00528 Binding-protein-dependent transport system inner membrane component RD1_RS13190 PF16874 Glycosyl hydrolase family 36 C-terminal domain RD1_RS13190 PF16875 Glycosyl hydrolase family 36 N-terminal domain RD1_RS13200 PF05035 2-keto-3-deoxy-galactonokinase RD1_RS13205 PF01081 KDPG and KHG aldolase RD1_RS13210 PF08532 Beta-galactosidase trimerisation domain RD1_RS13210 PF02449 Beta-galactosidase RD1_RS13210 PF08533 Beta-galactosidase C-terminal domain RD1_RS13215 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II RD1_RS13215 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III RD1_RS13215 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I RD1_RS13215 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain RD1_RS13220 PF02446 4-alpha-glucanotransferase RD1_RS13225 PF00128 Alpha amylase, catalytic domain RD1_RS13225 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) RD1_RS13230 PF00534 Glycosyl transferases group 1 RD1_RS13230 PF08323 Starch synthase catalytic domain RD1_RS13235 PF00483 Nucleotidyl transferase RD1_RS13240 PF00128 Alpha amylase, catalytic domain RD1_RS13240 PF02806 Alpha amylase, C-terminal all-beta domain RD1_RS13240 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) RD1_RS13245 PF00343 Carbohydrate phosphorylase RD1_RS13250 PF00294 pfkB family carbohydrate kinase RD1_RS13255 PF01081 KDPG and KHG aldolase RD1_RS13260 PF00920 Dehydratase family RD1_RS13265 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain RD1_RS13265 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain RD1_RS13270 PF00465 Iron-containing alcohol dehydrogenase RD1_RS13275 PF02782 FGGY family of carbohydrate kinases, C-terminal domain RD1_RS13275 PF00370 FGGY family of carbohydrate kinases, N-terminal domain RD1_RS13280 PF01266 FAD dependent oxidoreductase RD1_RS13280 PF16901 C-terminal domain of alpha-glycerophosphate oxidase RD1_RS13285 PF08220 DeoR-like helix-turn-helix domain RD1_RS13285 PF00455 DeoR C terminal sensor domain RD1_RS13295 PF00350 Dynamin family RD1_RS13300 PF02423 Ornithine cyclodeaminase/mu-crystallin family RD1_RS13305 PF01168 Alanine racemase, N-terminal domain RD1_RS13305 PF14031 Putative serine dehydratase domain RD1_RS13310 PF00291 Pyridoxal-phosphate dependent enzyme RD1_RS13315 PF00266 Aminotransferase class-V RD1_RS13320 PF01614 Bacterial transcriptional regulator RD1_RS13320 PF09339 IclR helix-turn-helix domain RD1_RS13325 PF07729 FCD domain RD1_RS13325 PF00392 Bacterial regulatory proteins, gntR family RD1_RS13335 PF13247 4Fe-4S dicluster domain RD1_RS13340 PF04879 Molybdopterin oxidoreductase Fe4S4 domain RD1_RS13340 PF01568 Molydopterin dinucleotide binding domain RD1_RS13340 PF00384 Molybdopterin oxidoreductase RD1_RS13380 PF10609 NUBPL iron-transfer P-loop NTPase RD1_RS13395 PF12849 PBP superfamily domain RD1_RS13400 PF00005 ABC transporter RD1_RS13405 PF00528 Binding-protein-dependent transport system inner membrane component RD1_RS13420 PF00528 Binding-protein-dependent transport system inner membrane component RD1_RS13425 PF03459 TOBE domain RD1_RS13425 PF00005 ABC transporter RD1_RS13435 PF00501 AMP-binding enzyme RD1_RS13435 PF13193 AMP-binding enzyme C-terminal domain RD1_RS13440 PF00171 Aldehyde dehydrogenase family RD1_RS13460 PF00356 Bacterial regulatory proteins, lacI family RD1_RS13465 PF00698 Acyl transferase domain RD1_RS13470 PF02780 Transketolase, C-terminal domain RD1_RS13470 PF02779 Transketolase, pyrimidine binding domain RD1_RS13475 PF00211 Adenylate and Guanylate cyclase catalytic domain RD1_RS13475 PF13191 AAA ATPase domain RD1_RS13490 PF00528 Binding-protein-dependent transport system inner membrane component RD1_RS13495 PF00571 CBS domain RD1_RS13495 PF00005 ABC transporter RD1_RS13500 PF01232 Mannitol dehydrogenase Rossmann domain RD1_RS13500 PF08125 Mannitol dehydrogenase C-terminal domain RD1_RS13505 PF02614 Glucuronate isomerase RD1_RS13510 PF00528 Binding-protein-dependent transport system inner membrane component RD1_RS13515 PF00005 ABC transporter RD1_RS13520 PF00528 Binding-protein-dependent transport system inner membrane component RD1_RS13525 PF00528 Binding-protein-dependent transport system inner membrane component RD1_RS13530 PF13416 Bacterial extracellular solute-binding protein RD1_RS13535 PF00291 Pyridoxal-phosphate dependent enzyme RD1_RS13545 PF00672 HAMP domain RD1_RS13545 PF00512 His Kinase A (phospho-acceptor) domain RD1_RS13545 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RD1_RS13550 PF00072 Response regulator receiver domain RD1_RS13550 PF00486 Transcriptional regulatory protein, C terminal RD1_RS13565 PF01970 Tripartite tricarboxylate transporter TctA family RD1_RS13570 PF00004 ATPase family associated with various cellular activities (AAA) RD1_RS13570 PF05362 Lon protease (S16) C-terminal proteolytic domain RD1_RS13570 PF02190 ATP-dependent protease La (LON) substrate-binding domain RD1_RS13575 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain RD1_RS13575 PF00672 HAMP domain RD1_RS13580 PF01702 Queuine tRNA-ribosyltransferase RD1_RS13590 PF01145 SPFH domain / Band 7 family RD1_RS13600 PF18030 RimK PreATP-grasp domain RD1_RS13600 PF08443 RimK-like ATP-grasp domain RD1_RS13605 PF01883 Iron-sulfur cluster assembly protein RD1_RS13610 PF12464 Maltose acetyltransferase RD1_RS13610 PF14602 Hexapeptide repeat of succinyl-transferase RD1_RS13615 PF01521 Iron-sulphur cluster biosynthesis RD1_RS13620 PF00121 Triosephosphate isomerase RD1_RS13625 PF00067 Cytochrome P450 RD1_RS13630 PF01037 Lrp/AsnC ligand binding domain RD1_RS13635 PF10414 Sirohaem synthase dimerisation region RD1_RS13635 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases RD1_RS13645 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain RD1_RS13645 PF01077 Nitrite and sulphite reductase 4Fe-4S domain RD1_RS13650 PF01507 Phosphoadenosine phosphosulfate reductase family RD1_RS13660 PF00970 Oxidoreductase FAD-binding domain RD1_RS13660 PF00175 Oxidoreductase NAD-binding domain RD1_RS13665 PF00707 Translation initiation factor IF-3, C-terminal domain RD1_RS13665 PF05198 Translation initiation factor IF-3, N-terminal domain RD1_RS13675 PF00941 FAD binding domain in molybdopterin dehydrogenase RD1_RS13675 PF03450 CO dehydrogenase flavoprotein C-terminal domain RD1_RS13680 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase RD1_RS13680 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain RD1_RS13685 PF00111 2Fe-2S iron-sulfur cluster binding domain RD1_RS13685 PF01799 [2Fe-2S] binding domain RD1_RS13695 PF13478 XdhC Rossmann domain RD1_RS13695 PF02625 XdhC and CoxI family RD1_RS13710 PF00462 Glutaredoxin RD1_RS13725 PF00456 Transketolase, thiamine diphosphate binding domain RD1_RS13725 PF02779 Transketolase, pyrimidine binding domain RD1_RS13725 PF02780 Transketolase, C-terminal domain RD1_RS13730 PF05661 Protein of unknown function (DUF808) RD1_RS13735 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain RD1_RS13735 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain RD1_RS13740 PF01467 Cytidylyltransferase-like RD1_RS13745 PF00571 CBS domain RD1_RS13745 PF00478 IMP dehydrogenase / GMP reductase domain RD1_RS13755 PF00171 Aldehyde dehydrogenase family RD1_RS13760 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase RD1_RS13760 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase RD1_RS13765 PF17755 UvrA DNA-binding domain RD1_RS13765 PF17760 UvrA interaction domain RD1_RS13765 PF00005 ABC transporter RD1_RS13775 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain RD1_RS13775 PF07992 Pyridine nucleotide-disulphide oxidoreductase RD1_RS13790 PF02547 Queuosine biosynthesis protein RD1_RS13800 PF00578 AhpC/TSA family RD1_RS13805 PF04305 Protein of unknown function (DUF455) RD1_RS13810 PF01551 Peptidase family M23 RD1_RS13820 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD RD1_RS13825 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD RD1_RS13830 PF00162 Phosphoglycerate kinase RD1_RS13840 PF00676 Dehydrogenase E1 component RD1_RS13845 PF02780 Transketolase, C-terminal domain RD1_RS13845 PF02779 Transketolase, pyrimidine binding domain RD1_RS13845 PF00364 Biotin-requiring enzyme RD1_RS13850 PF02817 e3 binding domain RD1_RS13850 PF00364 Biotin-requiring enzyme RD1_RS13850 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) RD1_RS13855 PF00132 Bacterial transferase hexapeptide (six repeats) RD1_RS13855 PF06426 Serine acetyltransferase, N-terminal RD1_RS13930 PF04860 Phage portal protein RD1_RS13945 PF02618 YceG-like family RD1_RS13950 PF00109 Beta-ketoacyl synthase, N-terminal domain RD1_RS13950 PF02801 Beta-ketoacyl synthase, C-terminal domain RD1_RS13960 PF00550 Phosphopantetheine attachment site RD1_RS13970 PF00698 Acyl transferase domain RD1_RS13975 PF01292 Prokaryotic cytochrome b561 RD1_RS13980 PF04264 YceI-like domain RD1_RS13985 PF01250 Ribosomal protein S6 RD1_RS13990 PF01084 Ribosomal protein S18 RD1_RS13995 PF03948 Ribosomal protein L9, C-terminal domain RD1_RS13995 PF01281 Ribosomal protein L9, N-terminal domain RD1_RS14005 PF00230 Major intrinsic protein RD1_RS14010 PF05698 Bacterial trigger factor protein (TF) C-terminus RD1_RS14010 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase RD1_RS14010 PF05697 Bacterial trigger factor protein (TF) RD1_RS14015 PF03459 TOBE domain RD1_RS14015 PF00005 ABC transporter RD1_RS14030 PF01728 FtsJ-like methyltransferase RD1_RS14035 PF02541 Ppx/GppA phosphatase family RD1_RS14045 PF02219 Methylenetetrahydrofolate reductase RD1_RS14060 PF02895 Signal transducing histidine kinase, homodimeric domain RD1_RS14060 PF00072 Response regulator receiver domain RD1_RS14060 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RD1_RS14060 PF01584 CheW-like domain RD1_RS14060 PF01627 Hpt domain RD1_RS14065 PF01627 Hpt domain RD1_RS14065 PF02895 Signal transducing histidine kinase, homodimeric domain RD1_RS14065 PF01584 CheW-like domain RD1_RS14065 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RD1_RS14070 PF01584 CheW-like domain RD1_RS14075 PF01739 CheR methyltransferase, SAM binding domain RD1_RS14075 PF03705 CheR methyltransferase, all-alpha domain RD1_RS14080 PF00072 Response regulator receiver domain RD1_RS14095 PF13683 Integrase core domain RD1_RS14095 PF13276 HTH-like domain RD1_RS14105 PF01527 Transposase RD1_RS14140 PF05336 L-rhamnose mutarotase RD1_RS14145 PF02653 Branched-chain amino acid transport system / permease component RD1_RS14150 PF02653 Branched-chain amino acid transport system / permease component RD1_RS14155 PF00005 ABC transporter RD1_RS14160 PF13407 Periplasmic binding protein domain RD1_RS14165 PF08220 DeoR-like helix-turn-helix domain RD1_RS14165 PF00455 DeoR C terminal sensor domain RD1_RS14170 PF00596 Class II Aldolase and Adducin N-terminal domain RD1_RS14175 PF01261 Xylose isomerase-like TIM barrel RD1_RS14180 PF00989 PAS fold RD1_RS14180 PF00512 His Kinase A (phospho-acceptor) domain RD1_RS14180 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RD1_RS14185 PF00072 Response regulator receiver domain RD1_RS14185 PF00196 Bacterial regulatory proteins, luxR family RD1_RS14190 PF01761 3-dehydroquinate synthase RD1_RS14195 PF01202 Shikimate kinase RD1_RS14205 PF00589 Phage integrase family RD1_RS14205 PF02899 Phage integrase, N-terminal SAM-like domain RD1_RS14210 PF01595 Cyclin M transmembrane N-terminal domain RD1_RS14210 PF03471 Transporter associated domain RD1_RS14210 PF00571 CBS domain RD1_RS14215 PF16350 FAD dependent oxidoreductase central domain RD1_RS14215 PF01571 Aminomethyltransferase folate-binding domain RD1_RS14215 PF08669 Glycine cleavage T-protein C-terminal barrel domain RD1_RS14215 PF01266 FAD dependent oxidoreductase RD1_RS14220 PF10011 Predicted membrane protein (DUF2254) RD1_RS14230 PF09084 NMT1/THI5 like RD1_RS14235 PF00528 Binding-protein-dependent transport system inner membrane component RD1_RS14240 PF00528 Binding-protein-dependent transport system inner membrane component RD1_RS14245 PF00005 ABC transporter RD1_RS14250 PF01979 Amidohydrolase family RD1_RS14255 PF01546 Peptidase family M20/M25/M40 RD1_RS14255 PF07687 Peptidase dimerisation domain RD1_RS14260 PF00440 Bacterial regulatory proteins, tetR family RD1_RS14260 PF08362 YcdC-like protein, C-terminal region RD1_RS14265 PF01180 Dihydroorotate dehydrogenase RD1_RS14270 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster RD1_RS14270 PF07992 Pyridine nucleotide-disulphide oxidoreductase RD1_RS14280 PF01339 CheB methylesterase RD1_RS14280 PF01739 CheR methyltransferase, SAM binding domain RD1_RS14280 PF03705 CheR methyltransferase, all-alpha domain RD1_RS14280 PF08448 PAS fold RD1_RS14290 PF01263 Aldose 1-epimerase RD1_RS14300 PF00334 Nucleoside diphosphate kinase RD1_RS14305 PF00005 ABC transporter RD1_RS14305 PF12848 ABC transporter RD1_RS14315 PF01914 MarC family integral membrane protein RD1_RS14330 PF00883 Cytosol aminopeptidase family, catalytic domain RD1_RS14345 PF04453 LPS transport system D RD1_RS14345 PF03968 OstA-like protein RD1_RS14355 PF04166 Pyridoxal phosphate biosynthetic protein PdxA RD1_RS14360 PF00398 Ribosomal RNA adenine dimethylase RD1_RS14370 PF05175 Methyltransferase small domain RD1_RS14370 PF17827 PrmC N-terminal domain RD1_RS14375 PF00472 RF-1 domain RD1_RS14375 PF03462 PCRF domain RD1_RS14390 PF00491 Arginase family RD1_RS14395 PF00491 Arginase family RD1_RS14400 PF07687 Peptidase dimerisation domain RD1_RS14400 PF01546 Peptidase family M20/M25/M40 RD1_RS14405 PF03819 MazG nucleotide pyrophosphohydrolase domain RD1_RS14410 PF01156 Inosine-uridine preferring nucleoside hydrolase RD1_RS14420 PF02696 Uncharacterized ACR, YdiU/UPF0061 family RD1_RS14430 PF00271 Helicase conserved C-terminal domain RD1_RS14430 PF00270 DEAD/DEAH box helicase RD1_RS14435 PF01475 Ferric uptake regulator family RD1_RS14440 PF00892 EamA-like transporter family RD1_RS14445 PF03952 Enolase, N-terminal domain RD1_RS14445 PF00113 Enolase, C-terminal TIM barrel domain RD1_RS14455 PF01266 FAD dependent oxidoreductase RD1_RS14460 PF03702 Anhydro-N-acetylmuramic acid kinase RD1_RS14465 PF00579 tRNA synthetases class I (W and Y) RD1_RS14470 PF00106 short chain dehydrogenase RD1_RS14480 PF16326 ABC transporter C-terminal domain RD1_RS14480 PF00005 ABC transporter RD1_RS14500 PF01783 Ribosomal L32p protein family RD1_RS14505 PF02504 Fatty acid synthesis protein RD1_RS14510 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal RD1_RS14510 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III RD1_RS14515 PF00216 Bacterial DNA-binding protein RD1_RS14520 PF13411 MerR HTH family regulatory protein RD1_RS14530 PF00692 dUTPase RD1_RS14535 PF04079 Segregation and condensation complex subunit ScpB RD1_RS14540 PF02616 Segregation and condensation protein ScpA RD1_RS14545 PF00933 Glycosyl hydrolase family 3 N terminal domain RD1_RS14555 PF05746 DALR anticodon binding domain RD1_RS14555 PF03485 Arginyl tRNA synthetase N terminal domain RD1_RS14555 PF00750 tRNA synthetases class I (R) RD1_RS14560 PF13286 Phosphohydrolase-associated domain RD1_RS14560 PF01966 HD domain RD1_RS14565 PF01521 Iron-sulphur cluster biosynthesis RD1_RS14605 PF02805 Metal binding domain of Ada RD1_RS14605 PF06029 AlkA N-terminal domain RD1_RS14605 PF00730 HhH-GPD superfamily base excision DNA repair protein RD1_RS14605 PF12833 Helix-turn-helix domain RD1_RS14615 PF07690 Major Facilitator Superfamily RD1_RS14625 PF00682 HMGL-like RD1_RS14625 PF08502 LeuA allosteric (dimerisation) domain RD1_RS14630 PF01406 tRNA synthetases class I (C) catalytic domain RD1_RS14635 PF00155 Aminotransferase class I and II RD1_RS14640 PF06253 Trimethylamine methyltransferase (MTTB) RD1_RS14660 PF08471 Class II vitamin B12-dependent ribonucleotide reductase RD1_RS14660 PF02867 Ribonucleotide reductase, barrel domain RD1_RS14675 PF00313 'Cold-shock' DNA-binding domain RD1_RS14680 PF01243 Pyridoxamine 5'-phosphate oxidase RD1_RS14680 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region RD1_RS14690 PF01810 LysE type translocator RD1_RS14695 PF00156 Phosphoribosyl transferase domain RD1_RS14700 PF00155 Aminotransferase class I and II RD1_RS14710 PF04715 Anthranilate synthase component I, N terminal region RD1_RS14710 PF00425 chorismate binding enzyme RD1_RS14720 PF03707 Bacterial signalling protein N terminal repeat RD1_RS14720 PF00563 EAL domain RD1_RS14720 PF00990 Diguanylate cyclase, GGDEF domain RD1_RS14730 PF00117 Glutamine amidotransferase class-I RD1_RS14735 PF00591 Glycosyl transferase family, a/b domain RD1_RS14735 PF02885 Glycosyl transferase family, helical bundle domain RD1_RS14740 PF03167 Uracil DNA glycosylase superfamily RD1_RS14745 PF00218 Indole-3-glycerol phosphate synthase RD1_RS14750 PF01967 MoaC family RD1_RS14755 PF00994 Probable molybdopterin binding domain RD1_RS14755 PF03454 MoeA C-terminal region (domain IV) RD1_RS14755 PF03453 MoeA N-terminal region (domain I and II) RD1_RS14760 PF00717 Peptidase S24-like RD1_RS14760 PF01726 LexA DNA binding domain RD1_RS14765 PF03772 Competence protein RD1_RS14765 PF00753 Metallo-beta-lactamase superfamily RD1_RS14765 PF13567 Domain of unknown function (DUF4131) RD1_RS14770 PF00749 tRNA synthetases class I (E and Q), catalytic domain RD1_RS14775 PF00285 Citrate synthase, C-terminal domain RD1_RS14785 PF00378 Enoyl-CoA hydratase/isomerase RD1_RS14790 PF03918 Cytochrome C biogenesis protein RD1_RS14795 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal RD1_RS14795 PF01578 Cytochrome C assembly protein RD1_RS14810 PF03100 CcmE RD1_RS14815 PF02774 Semialdehyde dehydrogenase, dimerisation domain RD1_RS14815 PF01118 Semialdehyde dehydrogenase, NAD binding domain RD1_RS14820 PF01177 Asp/Glu/Hydantoin racemase RD1_RS14835 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RD1_RS14835 PF03466 LysR substrate binding domain RD1_RS14840 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain RD1_RS14840 PF02769 AIR synthase related protein, C-terminal domain RD1_RS14840 PF00586 AIR synthase related protein, N-terminal domain RD1_RS14855 PF01979 Amidohydrolase family RD1_RS14860 PF00156 Phosphoribosyl transferase domain RD1_RS14865 PF03796 DnaB-like helicase C terminal domain RD1_RS14865 PF00772 DnaB-like helicase N terminal domain RD1_RS14875 PF01168 Alanine racemase, N-terminal domain RD1_RS14875 PF00842 Alanine racemase, C-terminal domain RD1_RS14880 PF02405 Permease MlaE RD1_RS14885 PF00005 ABC transporter RD1_RS14895 PF06745 KaiC RD1_RS14895 PF18073 Rubredoxin metal binding domain RD1_RS14905 PF13537 Glutamine amidotransferase domain RD1_RS14905 PF00156 Phosphoribosyl transferase domain RD1_RS14910 PF00106 short chain dehydrogenase RD1_RS14915 PF01975 Survival protein SurE RD1_RS14935 PF00902 Sec-independent protein translocase protein (TatC) RD1_RS14940 PF02416 mttA/Hcf106 family RD1_RS14945 PF02416 mttA/Hcf106 family RD1_RS14970 PF00005 ABC transporter RD1_RS14980 PF16658 Class II release factor RF3, C-terminal domain RD1_RS14980 PF00009 Elongation factor Tu GTP binding domain RD1_RS14980 PF03144 Elongation factor Tu domain 2 RD1_RS14985 PF00271 Helicase conserved C-terminal domain RD1_RS14985 PF00270 DEAD/DEAH box helicase RD1_RS14990 PF17770 Ribonuclease J C-terminal domain RD1_RS14990 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain RD1_RS14990 PF12706 Beta-lactamase superfamily domain RD1_RS14995 PF03309 Type III pantothenate kinase RD1_RS15000 PF03099 Biotin/lipoate A/B protein ligase family RD1_RS15000 PF02237 Biotin protein ligase C terminal domain RD1_RS15005 PF00361 Proton-conducting membrane transporter RD1_RS15010 PF00361 Proton-conducting membrane transporter RD1_RS15015 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus RD1_RS15015 PF00361 Proton-conducting membrane transporter RD1_RS15020 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L RD1_RS15030 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 RD1_RS15035 PF02627 Carboxymuconolactone decarboxylase family RD1_RS15040 PF12838 4Fe-4S dicluster domain RD1_RS15045 PF00146 NADH dehydrogenase RD1_RS15055 PF00384 Molybdopterin oxidoreductase RD1_RS15055 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region RD1_RS15055 PF09326 NADH-ubiquinone oxidoreductase subunit G, C-terminal RD1_RS15075 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit RD1_RS15075 PF10531 SLBB domain RD1_RS15075 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region RD1_RS15085 PF00829 Ribosomal prokaryotic L21 protein RD1_RS15095 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit RD1_RS15110 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit RD1_RS15115 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit RD1_RS15120 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 RD1_RS15125 PF02469 Fasciclin domain RD1_RS15130 PF00378 Enoyl-CoA hydratase/isomerase RD1_RS15135 PF00682 HMGL-like RD1_RS15145 PF00289 Biotin carboxylase, N-terminal domain RD1_RS15145 PF00364 Biotin-requiring enzyme RD1_RS15145 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain RD1_RS15145 PF02785 Biotin carboxylase C-terminal domain RD1_RS15150 PF01039 Carboxyl transferase domain RD1_RS15160 PF03922 OmpW family RD1_RS15165 PF02771 Acyl-CoA dehydrogenase, N-terminal domain RD1_RS15165 PF00441 Acyl-CoA dehydrogenase, C-terminal domain RD1_RS15165 PF02770 Acyl-CoA dehydrogenase, middle domain RD1_RS15170 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family RD1_RS15175 PF13419 Haloacid dehalogenase-like hydrolase RD1_RS15180 PF00132 Bacterial transferase hexapeptide (six repeats) RD1_RS15180 PF12804 MobA-like NTP transferase domain RD1_RS15185 PF01380 SIS domain RD1_RS15195 PF06463 Molybdenum Cofactor Synthesis C RD1_RS15195 PF04055 Radical SAM superfamily RD1_RS15200 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) RD1_RS15205 PF00534 Glycosyl transferases group 1 RD1_RS15210 PF07687 Peptidase dimerisation domain RD1_RS15210 PF01546 Peptidase family M20/M25/M40 RD1_RS15215 PF07687 Peptidase dimerisation domain RD1_RS15215 PF01546 Peptidase family M20/M25/M40 RD1_RS15225 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle RD1_RS15230 PF00528 Binding-protein-dependent transport system inner membrane component RD1_RS15235 PF00528 Binding-protein-dependent transport system inner membrane component RD1_RS15235 PF12911 N-terminal TM domain of oligopeptide transport permease C RD1_RS15245 PF02233 NAD(P) transhydrogenase beta subunit RD1_RS15250 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch RD1_RS15250 PF05222 Alanine dehydrogenase/PNT, N-terminal domain RD1_RS15250 PF01262 Alanine dehydrogenase/PNT, C-terminal domain RD1_RS15270 PF01274 Malate synthase RD1_RS15275 PF01433 Peptidase family M1 domain RD1_RS15275 PF17432 Domain of unknown function (DUF3458_C) ARM repeats RD1_RS15275 PF11940 Domain of unknown function (DUF3458) Ig-like fold RD1_RS15305 PF02637 GatB domain RD1_RS15305 PF02934 GatB/GatE catalytic domain RD1_RS15335 PF00226 DnaJ domain RD1_RS15335 PF01556 DnaJ C terminal domain RD1_RS15335 PF00684 DnaJ central domain RD1_RS15340 PF07728 AAA domain (dynein-related subfamily) RD1_RS15340 PF08406 CbbQ/NirQ/NorQ C-terminal RD1_RS15340 PF12556 Cobaltochelatase CobS subunit N terminal RD1_RS15345 PF11775 Cobalamin biosynthesis protein CobT VWA domain RD1_RS15345 PF06213 Cobalamin biosynthesis protein CobT RD1_RS15350 PF00557 Metallopeptidase family M24 RD1_RS15350 PF05195 Aminopeptidase P, N-terminal domain RD1_RS15360 PF00654 Voltage gated chloride channel RD1_RS15365 PF02463 RecF/RecN/SMC N terminal domain RD1_RS15370 PF13525 Outer membrane lipoprotein RD1_RS15375 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase RD1_RS15385 PF02491 SHS2 domain inserted in FTSA RD1_RS15390 PF03799 Cell division protein FtsQ RD1_RS15395 PF01820 D-ala D-ala ligase N-terminus RD1_RS15395 PF07478 D-ala D-ala ligase C-terminus RD1_RS15400 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain RD1_RS15400 PF01565 FAD binding domain RD1_RS15410 PF08245 Mur ligase middle domain RD1_RS15410 PF01225 Mur ligase family, catalytic domain RD1_RS15410 PF02875 Mur ligase family, glutamate ligase domain RD1_RS15415 PF04101 Glycosyltransferase family 28 C-terminal domain RD1_RS15415 PF03033 Glycosyltransferase family 28 N-terminal domain RD1_RS15420 PF01098 Cell cycle protein RD1_RS15430 PF08245 Mur ligase middle domain RD1_RS15430 PF02875 Mur ligase family, glutamate ligase domain RD1_RS15435 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 RD1_RS15435 PF00953 Glycosyl transferase family 4 RD1_RS15440 PF08245 Mur ligase middle domain RD1_RS15440 PF01225 Mur ligase family, catalytic domain RD1_RS15440 PF02875 Mur ligase family, glutamate ligase domain RD1_RS15445 PF08245 Mur ligase middle domain RD1_RS15445 PF01225 Mur ligase family, catalytic domain RD1_RS15445 PF02875 Mur ligase family, glutamate ligase domain RD1_RS15450 PF03717 Penicillin-binding Protein dimerisation domain RD1_RS15450 PF00905 Penicillin binding protein transpeptidase domain RD1_RS15460 PF01795 MraW methylase family RD1_RS15465 PF02381 MraZ protein, putative antitoxin-like RD1_RS15470 PF01883 Iron-sulfur cluster assembly protein RD1_RS15470 PF10609 NUBPL iron-transfer P-loop NTPase RD1_RS15485 PF00580 UvrD/REP helicase N-terminal domain RD1_RS15485 PF13361 UvrD-like helicase C-terminal domain RD1_RS15490 PF01070 FMN-dependent dehydrogenase RD1_RS15495 PF00682 HMGL-like RD1_RS15495 PF00289 Biotin carboxylase, N-terminal domain RD1_RS15495 PF00364 Biotin-requiring enzyme RD1_RS15495 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain RD1_RS15495 PF02436 Conserved carboxylase domain RD1_RS15495 PF02785 Biotin carboxylase C-terminal domain RD1_RS15515 PF13683 Integrase core domain RD1_RS15515 PF13276 HTH-like domain RD1_RS15520 PF13276 HTH-like domain RD1_RS15520 PF00665 Integrase core domain RD1_RS15520 PF13333 Integrase core domain RD1_RS15535 PF04752 ChaC-like protein RD1_RS15550 PF02153 Prephenate dehydrogenase RD1_RS15555 PF00155 Aminotransferase class I and II RD1_RS15560 PF01757 Acyltransferase family RD1_RS15565 PF01479 S4 domain RD1_RS15565 PF00163 Ribosomal protein S4/S9 N-terminal domain RD1_RS15570 PF00117 Glutamine amidotransferase class-I RD1_RS15570 PF13673 Acetyltransferase (GNAT) domain RD1_RS15570 PF13302 Acetyltransferase (GNAT) domain RD1_RS15570 PF03352 Methyladenine glycosylase RD1_RS15570 PF00958 GMP synthase C terminal domain RD1_RS15580 PF02803 Thiolase, C-terminal domain RD1_RS15580 PF00108 Thiolase, N-terminal domain RD1_RS15590 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RD1_RS15590 PF03466 LysR substrate binding domain RD1_RS15595 PF08241 Methyltransferase domain RD1_RS15605 PF00348 Polyprenyl synthetase RD1_RS15610 PF08544 GHMP kinases C terminal RD1_RS15630 PF01272 Transcription elongation factor, GreA/GreB, C-term RD1_RS15630 PF03449 Transcription elongation factor, N-terminal RD1_RS15640 PF00994 Probable molybdopterin binding domain RD1_RS15640 PF03453 MoeA N-terminal region (domain I and II) RD1_RS15640 PF03454 MoeA C-terminal region (domain IV) RD1_RS15645 PF03205 Molybdopterin guanine dinucleotide synthesis protein B RD1_RS15650 PF12804 MobA-like NTP transferase domain RD1_RS15655 PF02634 FdhD/NarQ family RD1_RS15690 PF00441 Acyl-CoA dehydrogenase, C-terminal domain RD1_RS15690 PF02771 Acyl-CoA dehydrogenase, N-terminal domain RD1_RS15690 PF02770 Acyl-CoA dehydrogenase, middle domain RD1_RS15690 PF12806 Acetyl-CoA dehydrogenase C-terminal like RD1_RS15695 PF03481 Putative GTP-binding controlling metal-binding RD1_RS15695 PF01300 Telomere recombination RD1_RS15700 PF02622 Uncharacterized ACR, COG1678 RD1_RS15710 PF00873 AcrB/AcrD/AcrF family RD1_RS15720 PF00994 Probable molybdopterin binding domain RD1_RS15725 PF01810 LysE type translocator RD1_RS15730 PF03167 Uracil DNA glycosylase superfamily RD1_RS15735 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain RD1_RS15735 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain RD1_RS15745 PF01979 Amidohydrolase family RD1_RS15750 PF02660 Glycerol-3-phosphate acyltransferase RD1_RS15760 PF06339 Ectoine synthase RD1_RS15775 PF01571 Aminomethyltransferase folate-binding domain RD1_RS15775 PF08669 Glycine cleavage T-protein C-terminal barrel domain RD1_RS15775 PF16350 FAD dependent oxidoreductase central domain RD1_RS15775 PF01266 FAD dependent oxidoreductase RD1_RS15780 PF01565 FAD binding domain RD1_RS15780 PF02913 FAD linked oxidases, C-terminal domain RD1_RS15790 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain RD1_RS15790 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain RD1_RS15800 PF08240 Alcohol dehydrogenase GroES-like domain RD1_RS15800 PF00107 Zinc-binding dehydrogenase RD1_RS15840 PF13361 UvrD-like helicase C-terminal domain RD1_RS15840 PF00580 UvrD/REP helicase N-terminal domain RD1_RS15850 PF13276 HTH-like domain RD1_RS15850 PF13683 Integrase core domain RD1_RS15855 PF01527 Transposase RD1_RS15870 PF01527 Transposase RD1_RS15875 PF13333 Integrase core domain RD1_RS15875 PF00665 Integrase core domain RD1_RS15875 PF13276 HTH-like domain RD1_RS15890 PF06594 Haemolysin-type calcium binding protein related domain RD1_RS15890 PF00353 RTX calcium-binding nonapeptide repeat (4 copies) RD1_RS15915 PF08521 Two-component sensor kinase N-terminal RD1_RS15915 PF00512 His Kinase A (phospho-acceptor) domain RD1_RS15915 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RD1_RS15920 PF00072 Response regulator receiver domain RD1_RS15920 PF00486 Transcriptional regulatory protein, C terminal RD1_RS15935 PF00768 D-alanyl-D-alanine carboxypeptidase RD1_RS15935 PF07943 Penicillin-binding protein 5, C-terminal domain RD1_RS15940 PF02223 Thymidylate kinase RD1_RS15945 PF09115 DNA polymerase III, delta subunit, C terminal RD1_RS15950 PF01026 TatD related DNase RD1_RS15955 PF03099 Biotin/lipoate A/B protein ligase family RD1_RS15955 PF12706 Beta-lactamase superfamily domain RD1_RS15970 PF01321 Creatinase/Prolidase N-terminal domain RD1_RS15970 PF00557 Metallopeptidase family M24 RD1_RS15980 PF00557 Metallopeptidase family M24 RD1_RS15980 PF01321 Creatinase/Prolidase N-terminal domain RD1_RS15985 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family RD1_RS15990 PF13419 Haloacid dehalogenase-like hydrolase RD1_RS16005 PF01032 FecCD transport family RD1_RS16015 PF00005 ABC transporter RD1_RS16030 PF00529 HlyD membrane-fusion protein of T1SS RD1_RS16030 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion RD1_RS16050 PF12697 Alpha/beta hydrolase family RD1_RS16055 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain RD1_RS16055 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain RD1_RS16055 PF02142 MGS-like domain RD1_RS16065 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal RD1_RS16065 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III RD1_RS16075 PF00265 Thymidine kinase RD1_RS16080 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain RD1_RS16080 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain RD1_RS16085 PF01588 Putative tRNA binding domain RD1_RS16090 PF03807 NADP oxidoreductase coenzyme F420-dependent RD1_RS16090 PF14748 Pyrroline-5-carboxylate reductase dimerisation RD1_RS16105 PF01790 Prolipoprotein diacylglyceryl transferase RD1_RS16115 PF02578 Multi-copper polyphenol oxidoreductase laccase RD1_RS16120 PF01037 Lrp/AsnC ligand binding domain RD1_RS16125 PF07992 Pyridine nucleotide-disulphide oxidoreductase RD1_RS16130 PF00067 Cytochrome P450 RD1_RS16140 PF00011 Hsp20/alpha crystallin family RD1_RS16150 PF00731 AIR carboxylase RD1_RS16155 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain RD1_RS16155 PF02222 ATP-grasp domain RD1_RS16160 PF07969 Amidohydrolase family RD1_RS16175 PF00892 EamA-like transporter family RD1_RS16180 PF00118 TCP-1/cpn60 chaperonin family RD1_RS16185 PF00166 Chaperonin 10 Kd subunit RD1_RS16200 PF02833 DHHA2 domain RD1_RS16200 PF01368 DHH family RD1_RS16210 PF01575 MaoC like domain RD1_RS16215 PF01687 Riboflavin kinase RD1_RS16215 PF06574 FAD synthetase RD1_RS16220 PF03692 Putative zinc- or iron-chelating domain RD1_RS16225 PF01212 Beta-eliminating lyase RD1_RS16230 PF12697 Alpha/beta hydrolase family RD1_RS16240 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase RD1_RS16240 PF14572 Phosphoribosyl synthetase-associated domain RD1_RS16255 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain RD1_RS16260 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain RD1_RS16260 PF02874 ATP synthase alpha/beta family, beta-barrel domain RD1_RS16265 PF00231 ATP synthase RD1_RS16270 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain RD1_RS16270 PF02874 ATP synthase alpha/beta family, beta-barrel domain RD1_RS16270 PF00306 ATP synthase alpha/beta chain, C terminal domain RD1_RS16275 PF00213 ATP synthase delta (OSCP) subunit RD1_RS16280 PF08241 Methyltransferase domain RD1_RS16285 PF00753 Metallo-beta-lactamase superfamily RD1_RS16285 PF16123 Hydroxyacylglutathione hydrolase C-terminus RD1_RS16290 PF17871 AAA lid domain RD1_RS16290 PF02861 Clp amino terminal domain, pathogenicity island component RD1_RS16290 PF10431 C-terminal, D2-small domain, of ClpB protein RD1_RS16290 PF00004 ATPase family associated with various cellular activities (AAA) RD1_RS16290 PF07724 AAA domain (Cdc48 subfamily) RD1_RS16295 PF09382 RQC domain RD1_RS16295 PF16124 RecQ zinc-binding RD1_RS16295 PF00570 HRDC domain RD1_RS16295 PF00270 DEAD/DEAH box helicase RD1_RS16295 PF00271 Helicase conserved C-terminal domain RD1_RS16300 PF00556 Antenna complex alpha/beta subunit RD1_RS16305 PF03209 PUCC protein RD1_RS16315 PF03334 Na+/H+ antiporter subunit RD1_RS16320 PF04066 Multiple resistance and pH regulation protein F (MrpF / PhaF) RD1_RS16325 PF01899 Na+/H+ ion antiporter subunit RD1_RS16330 PF00361 Proton-conducting membrane transporter RD1_RS16335 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L RD1_RS16340 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus RD1_RS16340 PF13244 Domain of unknown function (DUF4040) RD1_RS16340 PF00361 Proton-conducting membrane transporter RD1_RS16340 PF04039 Domain related to MnhB subunit of Na+/H+ antiporter RD1_RS16355 PF00475 Imidazoleglycerol-phosphate dehydratase RD1_RS16360 PF00117 Glutamine amidotransferase class-I RD1_RS16375 PF00977 Histidine biosynthesis protein RD1_RS16380 PF00977 Histidine biosynthesis protein RD1_RS16385 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase RD1_RS16390 PF13380 CoA binding domain RD1_RS16400 PF00588 SpoU rRNA Methylase family RD1_RS16400 PF08032 RNA 2'-O ribose methyltransferase substrate binding RD1_RS16405 PF02690 Na+/Pi-cotransporter RD1_RS16410 PF00149 Calcineurin-like phosphoesterase RD1_RS16415 PF00528 Binding-protein-dependent transport system inner membrane component RD1_RS16420 PF00528 Binding-protein-dependent transport system inner membrane component RD1_RS16425 PF13416 Bacterial extracellular solute-binding protein RD1_RS16430 PF08402 TOBE domain RD1_RS16430 PF00005 ABC transporter RD1_RS16435 PF00455 DeoR C terminal sensor domain RD1_RS16435 PF08220 DeoR-like helix-turn-helix domain RD1_RS16445 PF17912 MalK OB fold domain RD1_RS16445 PF00005 ABC transporter RD1_RS16455 PF17149 Periplasmic sensor domain found in signal transduction proteins RD1_RS16455 PF01627 Hpt domain RD1_RS16455 PF00072 Response regulator receiver domain RD1_RS16455 PF00512 His Kinase A (phospho-acceptor) domain RD1_RS16455 PF00672 HAMP domain RD1_RS16455 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RD1_RS16465 PF00196 Bacterial regulatory proteins, luxR family RD1_RS16465 PF00072 Response regulator receiver domain RD1_RS16485 PF05378 Hydantoinase/oxoprolinase N-terminal region RD1_RS16485 PF01968 Hydantoinase/oxoprolinase RD1_RS16490 PF02538 Hydantoinase B/oxoprolinase RD1_RS16495 PF12399 Branched-chain amino acid ATP-binding cassette transporter RD1_RS16495 PF00005 ABC transporter RD1_RS16500 PF00005 ABC transporter RD1_RS16505 PF02653 Branched-chain amino acid transport system / permease component RD1_RS16510 PF02653 Branched-chain amino acid transport system / permease component RD1_RS16530 PF00529 HlyD membrane-fusion protein of T1SS RD1_RS16530 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion RD1_RS16535 PF00486 Transcriptional regulatory protein, C terminal RD1_RS16535 PF00072 Response regulator receiver domain RD1_RS16540 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RD1_RS16540 PF00512 His Kinase A (phospho-acceptor) domain RD1_RS16540 PF01627 Hpt domain RD1_RS16540 PF00072 Response regulator receiver domain RD1_RS16545 PF02954 Bacterial regulatory protein, Fis family RD1_RS16545 PF13188 PAS domain RD1_RS16545 PF00158 Sigma-54 interaction domain RD1_RS16560 PF00005 ABC transporter RD1_RS16565 PF00005 ABC transporter RD1_RS16570 PF03069 Acetamidase/Formamidase family RD1_RS16590 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component RD1_RS16595 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component RD1_RS16595 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component RD1_RS16600 PF03480 Bacterial extracellular solute-binding protein, family 7 RD1_RS16605 PF02110 Hydroxyethylthiazole kinase family RD1_RS16610 PF02581 Thiamine monophosphate synthase RD1_RS16615 PF08543 Phosphomethylpyrimidine kinase RD1_RS16620 PF03070 TENA/THI-4/PQQC family RD1_RS16625 PF04198 Putative sugar-binding domain RD1_RS16635 PF00106 short chain dehydrogenase RD1_RS16640 PF00370 FGGY family of carbohydrate kinases, N-terminal domain RD1_RS16640 PF02782 FGGY family of carbohydrate kinases, C-terminal domain RD1_RS16650 PF00528 Binding-protein-dependent transport system inner membrane component RD1_RS16655 PF00528 Binding-protein-dependent transport system inner membrane component RD1_RS16660 PF01547 Bacterial extracellular solute-binding protein RD1_RS16665 PF17912 MalK OB fold domain RD1_RS16665 PF00005 ABC transporter RD1_RS16665 PF03459 TOBE domain RD1_RS16670 PF00107 Zinc-binding dehydrogenase RD1_RS16670 PF08240 Alcohol dehydrogenase GroES-like domain RD1_RS16675 PF02502 Ribose/Galactose Isomerase RD1_RS16680 PF00121 Triosephosphate isomerase RD1_RS16685 PF01261 Xylose isomerase-like TIM barrel RD1_RS16695 PF02782 FGGY family of carbohydrate kinases, C-terminal domain RD1_RS16705 PF01266 FAD dependent oxidoreductase RD1_RS16705 PF16901 C-terminal domain of alpha-glycerophosphate oxidase RD1_RS16710 PF00596 Class II Aldolase and Adducin N-terminal domain RD1_RS16715 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain RD1_RS16715 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain RD1_RS16720 PF00370 FGGY family of carbohydrate kinases, N-terminal domain RD1_RS16720 PF02782 FGGY family of carbohydrate kinases, C-terminal domain RD1_RS16725 PF03459 TOBE domain RD1_RS16725 PF00005 ABC transporter RD1_RS16725 PF17912 MalK OB fold domain RD1_RS16730 PF17912 MalK OB fold domain RD1_RS16730 PF00005 ABC transporter RD1_RS16735 PF00528 Binding-protein-dependent transport system inner membrane component RD1_RS16740 PF00528 Binding-protein-dependent transport system inner membrane component RD1_RS16745 PF01547 Bacterial extracellular solute-binding protein RD1_RS16750 PF04198 Putative sugar-binding domain RD1_RS16755 PF01958 Domain of unknown function DUF108 RD1_RS16755 PF03447 Homoserine dehydrogenase, NAD binding domain RD1_RS16760 PF00266 Aminotransferase class-V RD1_RS16765 PF00884 Sulfatase RD1_RS16765 PF16347 Domain of unknown function (DUF4976) RD1_RS16785 PF01047 MarR family RD1_RS16790 PF04209 homogentisate 1,2-dioxygenase RD1_RS16795 PF13417 Glutathione S-transferase, N-terminal domain RD1_RS16800 PF01557 Fumarylacetoacetate (FAA) hydrolase family RD1_RS16810 PF04715 Anthranilate synthase component I, N terminal region RD1_RS16810 PF00425 chorismate binding enzyme RD1_RS16810 PF00117 Glutamine amidotransferase class-I RD1_RS16820 PF02310 B12 binding domain RD1_RS16820 PF02574 Homocysteine S-methyltransferase RD1_RS16820 PF00809 Pterin binding enzyme RD1_RS16820 PF02965 Vitamin B12 dependent methionine synthase, activation domain RD1_RS16820 PF02607 B12 binding domain RD1_RS16825 PF02574 Homocysteine S-methyltransferase RD1_RS16825 PF02607 B12 binding domain RD1_RS16825 PF02310 B12 binding domain RD1_RS16825 PF02965 Vitamin B12 dependent methionine synthase, activation domain RD1_RS16825 PF00809 Pterin binding enzyme RD1_RS16830 PF00892 EamA-like transporter family RD1_RS16840 PF00384 Molybdopterin oxidoreductase RD1_RS16840 PF18364 Molybdopterin oxidoreductase N-terminal domain RD1_RS16840 PF01568 Molydopterin dinucleotide binding domain RD1_RS16845 PF00486 Transcriptional regulatory protein, C terminal RD1_RS16845 PF00072 Response regulator receiver domain RD1_RS16850 PF00072 Response regulator receiver domain RD1_RS16850 PF01627 Hpt domain RD1_RS16850 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RD1_RS16850 PF17149 Periplasmic sensor domain found in signal transduction proteins RD1_RS16850 PF00672 HAMP domain RD1_RS16850 PF00512 His Kinase A (phospho-acceptor) domain RD1_RS16865 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain RD1_RS16865 PF07992 Pyridine nucleotide-disulphide oxidoreductase RD1_RS16870 PF00462 Glutaredoxin RD1_RS16885 PF00291 Pyridoxal-phosphate dependent enzyme RD1_RS16890 PF00202 Aminotransferase class-III RD1_RS16900 PF07969 Amidohydrolase family RD1_RS16905 PF00221 Aromatic amino acid lyase RD1_RS16915 PF02515 CoA-transferase family III RD1_RS16920 PF02771 Acyl-CoA dehydrogenase, N-terminal domain RD1_RS16920 PF02770 Acyl-CoA dehydrogenase, middle domain RD1_RS16920 PF00441 Acyl-CoA dehydrogenase, C-terminal domain RD1_RS16925 PF17391 Urocanase N-terminal domain RD1_RS16925 PF17392 Urocanase C-terminal domain RD1_RS16925 PF01175 Urocanase Rossmann-like domain RD1_RS16930 PF00355 Rieske [2Fe-2S] domain RD1_RS16940 PF00034 Cytochrome c RD1_RS16945 PF07995 Glucose / Sorbosone dehydrogenase RD1_RS16950 PF04002 RadC-like JAB domain RD1_RS16955 PF00920 Dehydratase family RD1_RS16970 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RD1_RS16970 PF00183 Hsp90 protein RD1_RS16980 PF00999 Sodium/hydrogen exchanger family RD1_RS16990 PF03707 Bacterial signalling protein N terminal repeat RD1_RS16990 PF00990 Diguanylate cyclase, GGDEF domain RD1_RS16990 PF00563 EAL domain RD1_RS16995 PF02734 DAK2 domain RD1_RS16995 PF02733 Dak1 domain RD1_RS17000 PF02894 Oxidoreductase family, C-terminal alpha/beta domain RD1_RS17000 PF01408 Oxidoreductase family, NAD-binding Rossmann fold RD1_RS17005 PF00370 FGGY family of carbohydrate kinases, N-terminal domain RD1_RS17005 PF02782 FGGY family of carbohydrate kinases, C-terminal domain RD1_RS17010 PF01261 Xylose isomerase-like TIM barrel RD1_RS17015 PF00743 Flavin-binding monooxygenase-like RD1_RS17045 PF00128 Alpha amylase, catalytic domain RD1_RS17060 PF00528 Binding-protein-dependent transport system inner membrane component RD1_RS17065 PF00528 Binding-protein-dependent transport system inner membrane component RD1_RS17075 PF17912 MalK OB fold domain RD1_RS17075 PF03459 TOBE domain RD1_RS17075 PF00005 ABC transporter RD1_RS17080 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family RD1_RS17080 PF00356 Bacterial regulatory proteins, lacI family RD1_RS17090 PF00005 ABC transporter RD1_RS17090 PF00664 ABC transporter transmembrane region RD1_RS17095 PF03412 Peptidase C39 family RD1_RS17095 PF00005 ABC transporter RD1_RS17095 PF00664 ABC transporter transmembrane region RD1_RS17100 PF13533 Biotin-lipoyl like RD1_RS17105 PF03109 ABC1 family RD1_RS17115 PF00924 Mechanosensitive ion channel RD1_RS17135 PF00294 pfkB family carbohydrate kinase RD1_RS17140 PF05025 RbsD / FucU transport protein family RD1_RS17145 PF03459 TOBE domain RD1_RS17145 PF17912 MalK OB fold domain RD1_RS17145 PF00005 ABC transporter RD1_RS17165 PF00528 Binding-protein-dependent transport system inner membrane component RD1_RS17170 PF00528 Binding-protein-dependent transport system inner membrane component RD1_RS17205 PF00248 Aldo/keto reductase family RD1_RS17220 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RD1_RS17220 PF03466 LysR substrate binding domain RD1_RS17225 PF00370 FGGY family of carbohydrate kinases, N-terminal domain RD1_RS17225 PF02782 FGGY family of carbohydrate kinases, C-terminal domain RD1_RS17230 PF00248 Aldo/keto reductase family RD1_RS17240 PF00294 pfkB family carbohydrate kinase RD1_RS17270 PF03480 Bacterial extracellular solute-binding protein, family 7 RD1_RS17280 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component RD1_RS17290 PF00775 Dioxygenase RD1_RS17290 PF12391 Protocatechuate 3,4-dioxygenase beta subunit N terminal RD1_RS17295 PF00775 Dioxygenase RD1_RS17300 PF02685 Glucokinase RD1_RS17310 PF00155 Aminotransferase class I and II RD1_RS17330 PF01261 Xylose isomerase-like TIM barrel RD1_RS17335 PF00596 Class II Aldolase and Adducin N-terminal domain RD1_RS17340 PF07005 Sugar-binding N-terminal domain RD1_RS17340 PF17042 Nucleotide-binding C-terminal domain RD1_RS17345 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase RD1_RS17345 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase RD1_RS17350 PF07729 FCD domain RD1_RS17350 PF00392 Bacterial regulatory proteins, gntR family RD1_RS17360 PF00180 Isocitrate/isopropylmalate dehydrogenase RD1_RS17370 PF00753 Metallo-beta-lactamase superfamily RD1_RS17375 PF01774 UreD urease accessory protein RD1_RS17380 PF00547 Urease, gamma subunit RD1_RS17385 PF00699 Urease beta subunit RD1_RS17390 PF04199 Putative cyclase RD1_RS17395 PF02627 Carboxymuconolactone decarboxylase family RD1_RS17400 PF01979 Amidohydrolase family RD1_RS17400 PF00449 Urease alpha-subunit, N-terminal domain RD1_RS17410 PF05194 UreE urease accessory protein, C-terminal domain RD1_RS17410 PF02814 UreE urease accessory protein, N-terminal domain RD1_RS17415 PF01730 UreF RD1_RS17420 PF02492 CobW/HypB/UreG, nucleotide-binding domain RD1_RS17425 PF00107 Zinc-binding dehydrogenase RD1_RS17425 PF08240 Alcohol dehydrogenase GroES-like domain RD1_RS17430 PF00356 Bacterial regulatory proteins, lacI family RD1_RS17435 PF00815 Histidinol dehydrogenase RD1_RS17445 PF08240 Alcohol dehydrogenase GroES-like domain RD1_RS17445 PF00107 Zinc-binding dehydrogenase RD1_RS17465 PF01070 FMN-dependent dehydrogenase RD1_RS17470 PF00881 Nitroreductase family RD1_RS17475 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases RD1_RS17480 PF14824 Sirohaem biosynthesis protein central RD1_RS17480 PF10414 Sirohaem synthase dimerisation region RD1_RS17480 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases RD1_RS17485 PF07685 CobB/CobQ-like glutamine amidotransferase domain RD1_RS17485 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain RD1_RS17490 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases RD1_RS17500 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases RD1_RS17505 PF02571 Precorrin-6x reductase CbiJ/CobK RD1_RS17510 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases RD1_RS17515 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases RD1_RS17520 PF02570 Precorrin-8X methylmutase RD1_RS17525 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain RD1_RS17530 PF02514 CobN/Magnesium Chelatase RD1_RS17535 PF02492 CobW/HypB/UreG, nucleotide-binding domain RD1_RS17535 PF07683 Cobalamin synthesis protein cobW C-terminal domain RD1_RS17545 PF00871 Acetokinase family RD1_RS17550 PF13091 PLD-like domain RD1_RS17565 PF13614 AAA domain RD1_RS17605 PF00534 Glycosyl transferases group 1 RD1_RS17605 PF13439 Glycosyltransferase Family 4 RD1_RS17620 PF13537 Glutamine amidotransferase domain RD1_RS17620 PF00733 Asparagine synthase RD1_RS17635 PF00005 ABC transporter RD1_RS17640 PF02397 Bacterial sugar transferase RD1_RS17660 PF01571 Aminomethyltransferase folate-binding domain RD1_RS17660 PF08669 Glycine cleavage T-protein C-terminal barrel domain RD1_RS17665 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain RD1_RS17665 PF13378 Enolase C-terminal domain-like RD1_RS17670 PF00732 GMC oxidoreductase RD1_RS17670 PF05199 GMC oxidoreductase RD1_RS17675 PF00528 Binding-protein-dependent transport system inner membrane component RD1_RS17680 PF00528 Binding-protein-dependent transport system inner membrane component RD1_RS17685 PF08402 TOBE domain RD1_RS17685 PF00005 ABC transporter RD1_RS17700 PF03466 LysR substrate binding domain RD1_RS17700 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RD1_RS17710 PF12833 Helix-turn-helix domain RD1_RS17710 PF06719 AraC-type transcriptional regulator N-terminus RD1_RS17725 PF00296 Luciferase-like monooxygenase RD1_RS17735 PF01261 Xylose isomerase-like TIM barrel RD1_RS17745 PF02894 Oxidoreductase family, C-terminal alpha/beta domain RD1_RS17745 PF01408 Oxidoreductase family, NAD-binding Rossmann fold RD1_RS17755 PF00294 pfkB family carbohydrate kinase RD1_RS17765 PF03459 TOBE domain RD1_RS17765 PF00005 ABC transporter RD1_RS17765 PF17912 MalK OB fold domain RD1_RS17770 PF00528 Binding-protein-dependent transport system inner membrane component RD1_RS17775 PF00528 Binding-protein-dependent transport system inner membrane component RD1_RS17785 PF08402 TOBE domain RD1_RS17785 PF00005 ABC transporter RD1_RS17795 PF00356 Bacterial regulatory proteins, lacI family RD1_RS17800 PF05025 RbsD / FucU transport protein family RD1_RS17805 PF02734 DAK2 domain RD1_RS17805 PF02733 Dak1 domain RD1_RS17810 PF03937 Flavinator of succinate dehydrogenase RD1_RS17815 PF01381 Helix-turn-helix RD1_RS17820 PF00155 Aminotransferase class I and II RD1_RS17825 PF01926 50S ribosome-binding GTPase RD1_RS17825 PF06071 Protein of unknown function (DUF933) RD1_RS17835 PF00290 Tryptophan synthase alpha chain RD1_RS17840 PF01070 FMN-dependent dehydrogenase RD1_RS17850 PF14693 Ribosomal protein TL5, C-terminal domain RD1_RS17850 PF01386 Ribosomal L25p family RD1_RS17855 PF01195 Peptidyl-tRNA hydrolase RD1_RS17880 PF00291 Pyridoxal-phosphate dependent enzyme RD1_RS17890 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase RD1_RS17900 PF00216 Bacterial DNA-binding protein RD1_RS17905 PF00575 S1 RNA binding domain RD1_RS17915 PF02224 Cytidylate kinase RD1_RS17920 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) RD1_RS17925 PF02390 Putative methyltransferase RD1_RS17930 PF02772 S-adenosylmethionine synthetase, central domain RD1_RS17930 PF00438 S-adenosylmethionine synthetase, N-terminal domain RD1_RS17930 PF02773 S-adenosylmethionine synthetase, C-terminal domain RD1_RS17935 PF00795 Carbon-nitrogen hydrolase RD1_RS17940 PF00571 CBS domain RD1_RS17940 PF03471 Transporter associated domain RD1_RS17945 PF02130 Uncharacterized protein family UPF0054 RD1_RS17950 PF02562 PhoH-like protein RD1_RS17955 PF00919 Uncharacterized protein family UPF0004 RD1_RS17955 PF04055 Radical SAM superfamily RD1_RS17955 PF01938 TRAM domain RD1_RS17960 PF01475 Ferric uptake regulator family RD1_RS17965 PF07977 FabA-like domain RD1_RS17970 PF00109 Beta-ketoacyl synthase, N-terminal domain RD1_RS17970 PF02801 Beta-ketoacyl synthase, C-terminal domain RD1_RS17985 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase RD1_RS17995 PF00561 alpha/beta hydrolase fold RD1_RS18000 PF00291 Pyridoxal-phosphate dependent enzyme RD1_RS18005 PF12146 Serine aminopeptidase, S33 RD1_RS18015 PF10397 Adenylosuccinate lyase C-terminus RD1_RS18015 PF00206 Lyase RD1_RS18020 PF07690 Major Facilitator Superfamily RD1_RS18025 PF08240 Alcohol dehydrogenase GroES-like domain RD1_RS18025 PF00107 Zinc-binding dehydrogenase RD1_RS18030 PF13378 Enolase C-terminal domain-like RD1_RS18030 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain RD1_RS18055 PF00356 Bacterial regulatory proteins, lacI family RD1_RS18070 PF00815 Histidinol dehydrogenase RD1_RS18080 PF00528 Binding-protein-dependent transport system inner membrane component RD1_RS18085 PF00528 Binding-protein-dependent transport system inner membrane component RD1_RS18095 PF17912 MalK OB fold domain RD1_RS18095 PF00005 ABC transporter RD1_RS18100 PF00441 Acyl-CoA dehydrogenase, C-terminal domain RD1_RS18100 PF02770 Acyl-CoA dehydrogenase, middle domain RD1_RS18100 PF02771 Acyl-CoA dehydrogenase, N-terminal domain RD1_RS18105 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RD1_RS18105 PF03466 LysR substrate binding domain RD1_RS18110 PF02586 SOS response associated peptidase (SRAP) RD1_RS18115 PF00149 Calcineurin-like phosphoesterase RD1_RS18115 PF02872 5'-nucleotidase, C-terminal domain RD1_RS18125 PF01180 Dihydroorotate dehydrogenase RD1_RS18130 PF01554 MatE RD1_RS18145 PF00376 MerR family regulatory protein RD1_RS18145 PF09278 MerR, DNA binding RD1_RS18155 PF00196 Bacterial regulatory proteins, luxR family RD1_RS18155 PF03472 Autoinducer binding domain RD1_RS18160 PF00376 MerR family regulatory protein RD1_RS18160 PF09278 MerR, DNA binding RD1_RS18165 PF02771 Acyl-CoA dehydrogenase, N-terminal domain RD1_RS18165 PF00441 Acyl-CoA dehydrogenase, C-terminal domain RD1_RS18165 PF12806 Acetyl-CoA dehydrogenase C-terminal like RD1_RS18165 PF02770 Acyl-CoA dehydrogenase, middle domain RD1_RS18170 PF02771 Acyl-CoA dehydrogenase, N-terminal domain RD1_RS18170 PF02770 Acyl-CoA dehydrogenase, middle domain RD1_RS18170 PF00441 Acyl-CoA dehydrogenase, C-terminal domain RD1_RS18175 PF00043 Glutathione S-transferase, C-terminal domain RD1_RS18175 PF02798 Glutathione S-transferase, N-terminal domain RD1_RS18180 PF00108 Thiolase, N-terminal domain RD1_RS18180 PF02803 Thiolase, C-terminal domain RD1_RS18185 PF00378 Enoyl-CoA hydratase/isomerase RD1_RS18185 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain RD1_RS18185 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain RD1_RS18190 PF13193 AMP-binding enzyme C-terminal domain RD1_RS18190 PF00501 AMP-binding enzyme RD1_RS18205 PF01676 Metalloenzyme superfamily RD1_RS18210 PF02885 Glycosyl transferase family, helical bundle domain RD1_RS18210 PF00591 Glycosyl transferase family, a/b domain RD1_RS18210 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain RD1_RS18215 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region RD1_RS18240 PF00501 AMP-binding enzyme RD1_RS18240 PF16177 Acetyl-coenzyme A synthetase N-terminus RD1_RS18240 PF13193 AMP-binding enzyme C-terminal domain RD1_RS18245 PF05532 CsbD-like RD1_RS18250 PF04432 Coenzyme F420 hydrogenase/dehydrogenase, beta subunit C terminus RD1_RS18250 PF04422 Coenzyme F420 hydrogenase/dehydrogenase, beta subunit N-term RD1_RS18255 PF01513 ATP-NAD kinase RD1_RS18260 PF00464 Serine hydroxymethyltransferase RD1_RS18265 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component RD1_RS18275 PF03480 Bacterial extracellular solute-binding protein, family 7 RD1_RS18290 PF07729 FCD domain RD1_RS18290 PF00392 Bacterial regulatory proteins, gntR family RD1_RS18300 PF04542 Sigma-70 region 2 RD1_RS18300 PF04545 Sigma-70, region 4 RD1_RS18310 PF00082 Subtilase family RD1_RS18315 PF01297 Zinc-uptake complex component A periplasmic RD1_RS18325 PF00005 ABC transporter RD1_RS18330 PF00950 ABC 3 transport family RD1_RS18350 PF00565 Staphylococcal nuclease homologue RD1_RS18355 PF00009 Elongation factor Tu GTP binding domain RD1_RS18355 PF03144 Elongation factor Tu domain 2 RD1_RS18355 PF03143 Elongation factor Tu C-terminal domain RD1_RS18360 PF00009 Elongation factor Tu GTP binding domain RD1_RS18360 PF03764 Elongation factor G, domain IV RD1_RS18360 PF14492 Elongation Factor G, domain II RD1_RS18360 PF03144 Elongation factor Tu domain 2 RD1_RS18360 PF00679 Elongation factor G C-terminus RD1_RS18365 PF00177 Ribosomal protein S7p/S5e RD1_RS18370 PF00164 Ribosomal protein S12/S23 RD1_RS18375 PF00892 EamA-like transporter family RD1_RS18380 PF04997 RNA polymerase Rpb1, domain 1 RD1_RS18380 PF04983 RNA polymerase Rpb1, domain 3 RD1_RS18380 PF00623 RNA polymerase Rpb1, domain 2 RD1_RS18380 PF04998 RNA polymerase Rpb1, domain 5 RD1_RS18380 PF05000 RNA polymerase Rpb1, domain 4 RD1_RS18390 PF00562 RNA polymerase Rpb2, domain 6 RD1_RS18390 PF04561 RNA polymerase Rpb2, domain 2 RD1_RS18390 PF04565 RNA polymerase Rpb2, domain 3 RD1_RS18390 PF10385 RNA polymerase beta subunit external 1 domain RD1_RS18390 PF04563 RNA polymerase beta subunit RD1_RS18390 PF04560 RNA polymerase Rpb2, domain 7 RD1_RS18395 PF00542 Ribosomal protein L7/L12 C-terminal domain RD1_RS18395 PF16320 Ribosomal protein L7/L12 dimerisation domain RD1_RS18400 PF00466 Ribosomal protein L10 RD1_RS18405 PF00687 Ribosomal protein L1p/L10e family RD1_RS18410 PF00298 Ribosomal protein L11, RNA binding domain RD1_RS18410 PF03946 Ribosomal protein L11, N-terminal domain RD1_RS18415 PF00467 KOW motif RD1_RS18415 PF02357 Transcription termination factor nusG RD1_RS18435 PF00528 Binding-protein-dependent transport system inner membrane component RD1_RS18440 PF00005 ABC transporter RD1_RS18440 PF08402 TOBE domain RD1_RS18445 PF01547 Bacterial extracellular solute-binding protein RD1_RS18460 PF08281 Sigma-70, region 4 RD1_RS18460 PF04542 Sigma-70 region 2 RD1_RS18535 PF02384 N-6 DNA Methylase RD1_RS18570 PF00004 ATPase family associated with various cellular activities (AAA) RD1_RS18570 PF05362 Lon protease (S16) C-terminal proteolytic domain RD1_RS18570 PF02190 ATP-dependent protease La (LON) substrate-binding domain RD1_RS18575 PF03477 ATP cone domain RD1_RS18575 PF02867 Ribonucleotide reductase, barrel domain RD1_RS18575 PF00317 Ribonucleotide reductase, all-alpha domain RD1_RS18585 PF01634 ATP phosphoribosyltransferase RD1_RS18590 PF13393 Histidyl-tRNA synthetase RD1_RS18595 PF03129 Anticodon binding domain RD1_RS18595 PF13393 Histidyl-tRNA synthetase RD1_RS18605 PF14579 Helix-hairpin-helix motif RD1_RS18605 PF02811 PHP domain RD1_RS18605 PF07733 Bacterial DNA polymerase III alpha NTPase domain RD1_RS18605 PF17657 Bacterial DNA polymerase III alpha subunit finger domain RD1_RS18610 PF01799 [2Fe-2S] binding domain RD1_RS18610 PF00111 2Fe-2S iron-sulfur cluster binding domain RD1_RS18615 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain RD1_RS18615 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase RD1_RS18625 PF00005 ABC transporter RD1_RS18630 PF02653 Branched-chain amino acid transport system / permease component RD1_RS18635 PF02653 Branched-chain amino acid transport system / permease component RD1_RS18640 PF02608 ABC transporter substrate-binding protein PnrA-like RD1_RS18650 PF04107 Glutamate-cysteine ligase family 2(GCS2) RD1_RS18660 PF04452 RNA methyltransferase RD1_RS18665 PF01040 UbiA prenyltransferase family RD1_RS18670 PF05736 OprF membrane domain RD1_RS18670 PF00691 OmpA family RD1_RS18680 PF00582 Universal stress protein family RD1_RS18685 PF02391 MoaE protein RD1_RS18695 PF01066 CDP-alcohol phosphatidyltransferase RD1_RS18710 PF01699 Sodium/calcium exchanger protein RD1_RS18720 PF06965 Na+/H+ antiporter 1 RD1_RS18720 PF01343 Peptidase family S49 RD1_RS18725 PF01061 ABC-2 type transporter RD1_RS18730 PF00005 ABC transporter RD1_RS18735 PF00892 EamA-like transporter family RD1_RS18745 PF00109 Beta-ketoacyl synthase, N-terminal domain RD1_RS18745 PF08240 Alcohol dehydrogenase GroES-like domain RD1_RS18745 PF02801 Beta-ketoacyl synthase, C-terminal domain RD1_RS18745 PF14765 Polyketide synthase dehydratase RD1_RS18745 PF00550 Phosphopantetheine attachment site RD1_RS18745 PF08659 KR domain RD1_RS18745 PF16197 Ketoacyl-synthetase C-terminal extension RD1_RS18745 PF00698 Acyl transferase domain RD1_RS18750 PF06299 Protein of unknown function (DUF1045) RD1_RS18755 PF13486 Reductive dehalogenase subunit RD1_RS18755 PF12838 4Fe-4S dicluster domain RD1_RS18760 PF05199 GMC oxidoreductase RD1_RS18760 PF00732 GMC oxidoreductase RD1_RS18775 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component RD1_RS18780 PF09339 IclR helix-turn-helix domain RD1_RS18780 PF01614 Bacterial transcriptional regulator RD1_RS18795 PF14403 Circularly permuted ATP-grasp type 2 RD1_RS18820 PF16868 NMT1-like family RD1_RS18825 PF01571 Aminomethyltransferase folate-binding domain RD1_RS18825 PF16350 FAD dependent oxidoreductase central domain RD1_RS18825 PF01266 FAD dependent oxidoreductase RD1_RS18825 PF08669 Glycine cleavage T-protein C-terminal barrel domain RD1_RS18830 PF00202 Aminotransferase class-III RD1_RS18850 PF00528 Binding-protein-dependent transport system inner membrane component RD1_RS18855 PF00528 Binding-protein-dependent transport system inner membrane component RD1_RS18860 PF00005 ABC transporter RD1_RS18865 PF00005 ABC transporter RD1_RS18865 PF17912 MalK OB fold domain RD1_RS18880 PF08548 Peptidase M10 serralysin C terminal RD1_RS18880 PF00413 Matrixin RD1_RS18880 PF00353 RTX calcium-binding nonapeptide repeat (4 copies) RD1_RS18885 PF13416 Bacterial extracellular solute-binding protein RD1_RS18890 PF08402 TOBE domain RD1_RS18890 PF00005 ABC transporter RD1_RS18895 PF00528 Binding-protein-dependent transport system inner membrane component RD1_RS18900 PF00528 Binding-protein-dependent transport system inner membrane component RD1_RS18905 PF13416 Bacterial extracellular solute-binding protein RD1_RS18910 PF00850 Histone deacetylase domain RD1_RS18920 PF01042 Endoribonuclease L-PSP RD1_RS18940 PF01546 Peptidase family M20/M25/M40 RD1_RS18940 PF07687 Peptidase dimerisation domain RD1_RS18945 PF10070 Uncharacterized protein conserved in bacteria (DUF2309) RD1_RS18950 PF01010 NADH-dehyrogenase subunit F, TMs, (complex I) C-terminus RD1_RS18950 PF00361 Proton-conducting membrane transporter RD1_RS18950 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus RD1_RS18955 PF03466 LysR substrate binding domain RD1_RS18955 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RD1_RS18970 PF03466 LysR substrate binding domain RD1_RS18970 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RD1_RS18975 PF00576 HIUase/Transthyretin family RD1_RS18985 PF04115 Ureidoglycolate lyase RD1_RS18990 PF00860 Permease family RD1_RS19010 PF08361 MAATS-type transcriptional repressor, C-terminal region RD1_RS19010 PF00440 Bacterial regulatory proteins, tetR family RD1_RS19015 PF05853 beta-keto acid cleavage enzyme RD1_RS19025 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain RD1_RS19025 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain RD1_RS19050 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases RD1_RS19050 PF14824 Sirohaem biosynthesis protein central RD1_RS19050 PF10414 Sirohaem synthase dimerisation region RD1_RS19060 PF00384 Molybdopterin oxidoreductase RD1_RS19060 PF04879 Molybdopterin oxidoreductase Fe4S4 domain RD1_RS19060 PF01568 Molydopterin dinucleotide binding domain RD1_RS19060 PF04324 BFD-like [2Fe-2S] binding domain RD1_RS19065 PF00355 Rieske [2Fe-2S] domain RD1_RS19070 PF04324 BFD-like [2Fe-2S] binding domain RD1_RS19070 PF01077 Nitrite and sulphite reductase 4Fe-4S domain RD1_RS19070 PF18267 Rubredoxin NAD+ reductase C-terminal domain RD1_RS19070 PF07992 Pyridine nucleotide-disulphide oxidoreductase RD1_RS19070 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain RD1_RS19075 PF00005 ABC transporter RD1_RS19080 PF00528 Binding-protein-dependent transport system inner membrane component RD1_RS19085 PF00005 ABC transporter RD1_RS19090 PF00005 ABC transporter RD1_RS19095 PF08376 Nitrate and nitrite sensing RD1_RS19095 PF03861 ANTAR domain RD1_RS19125 PF08241 Methyltransferase domain RD1_RS19130 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RD1_RS19130 PF03466 LysR substrate binding domain RD1_RS19165 PF05171 Haemin-degrading HemS.ChuX domain RD1_RS19170 PF01497 Periplasmic binding protein RD1_RS19175 PF01032 FecCD transport family RD1_RS19180 PF00005 ABC transporter RD1_RS19185 PF03992 Antibiotic biosynthesis monooxygenase RD1_RS19190 PF00593 TonB dependent receptor RD1_RS19190 PF07715 TonB-dependent Receptor Plug Domain RD1_RS19205 PF01618 MotA/TolQ/ExbB proton channel family RD1_RS19220 PF03544 Gram-negative bacterial TonB protein C-terminal RD1_RS19230 PF00005 ABC transporter RD1_RS19230 PF13732 Domain of unknown function (DUF4162) RD1_RS19240 PF16363 GDP-mannose 4,6 dehydratase RD1_RS19250 PF03102 NeuB family RD1_RS19250 PF08666 SAF domain RD1_RS19260 PF02348 Cytidylyltransferase RD1_RS19265 PF00990 Diguanylate cyclase, GGDEF domain RD1_RS19265 PF13188 PAS domain RD1_RS19265 PF00563 EAL domain RD1_RS19265 PF03707 Bacterial signalling protein N terminal repeat RD1_RS19315 PF04717 Type VI secretion system, phage-baseplate injector RD1_RS19355 PF17862 AAA+ lid domain RD1_RS19355 PF01434 Peptidase family M41 RD1_RS19355 PF00004 ATPase family associated with various cellular activities (AAA) RD1_RS19370 PF10531 SLBB domain RD1_RS19370 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region RD1_RS19370 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit RD1_RS19375 PF12838 4Fe-4S dicluster domain RD1_RS19375 PF04879 Molybdopterin oxidoreductase Fe4S4 domain RD1_RS19375 PF00384 Molybdopterin oxidoreductase RD1_RS19375 PF01568 Molydopterin dinucleotide binding domain RD1_RS19375 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region RD1_RS19380 PF01268 Formate--tetrahydrofolate ligase RD1_RS19385 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain RD1_RS19385 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain RD1_RS19390 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain RD1_RS19390 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain RD1_RS19405 PF13660 Domain of unknown function (DUF4147) RD1_RS19405 PF05161 MOFRL family RD1_RS19410 PF03328 HpcH/HpaI aldolase/citrate lyase family RD1_RS19415 PF00196 Bacterial regulatory proteins, luxR family RD1_RS19415 PF00072 Response regulator receiver domain RD1_RS19425 PF00549 CoA-ligase RD1_RS19425 PF08442 ATP-grasp domain RD1_RS19430 PF02629 CoA binding domain RD1_RS19430 PF00549 CoA-ligase RD1_RS19435 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain RD1_RS19435 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain RD1_RS19440 PF00311 Phosphoenolpyruvate carboxylase RD1_RS19445 PF00464 Serine hydroxymethyltransferase RD1_RS19450 PF00120 Glutamine synthetase, catalytic domain RD1_RS19455 PF01645 Conserved region in glutamate synthase RD1_RS19460 PF01493 GXGXG motif RD1_RS19515 PF07992 Pyridine nucleotide-disulphide oxidoreductase RD1_RS19515 PF17806 Sarcosine oxidase A3 domain RD1_RS19515 PF08669 Glycine cleavage T-protein C-terminal barrel domain RD1_RS19515 PF01571 Aminomethyltransferase folate-binding domain RD1_RS20050 PF08669 Glycine cleavage T-protein C-terminal barrel domain RD1_RS20050 PF01571 Aminomethyltransferase folate-binding domain RD1_RS20050 PF01266 FAD dependent oxidoreductase RD1_RS20050 PF16350 FAD dependent oxidoreductase central domain RD1_RS20065 PF08669 Glycine cleavage T-protein C-terminal barrel domain RD1_RS20065 PF01571 Aminomethyltransferase folate-binding domain RD1_RS20065 PF16350 FAD dependent oxidoreductase central domain RD1_RS20065 PF01266 FAD dependent oxidoreductase RD1_RS20085 PF02803 Thiolase, C-terminal domain RD1_RS20085 PF00108 Thiolase, N-terminal domain RD1_RS20240 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster RD1_RS20240 PF07992 Pyridine nucleotide-disulphide oxidoreductase RD1_RS20365 PF08669 Glycine cleavage T-protein C-terminal barrel domain RD1_RS20365 PF01571 Aminomethyltransferase folate-binding domain RD1_RS20400 PF00924 Mechanosensitive ion channel RD1_RS20425 PF00672 HAMP domain RD1_RS20425 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RD1_RS20425 PF00512 His Kinase A (phospho-acceptor) domain RD1_RS20480 PF02203 Tar ligand binding domain homologue RD1_RS20480 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain RD1_RS20480 PF00672 HAMP domain RD1_RS20485 PF00672 HAMP domain RD1_RS20485 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain RD1_RS20485 PF02203 Tar ligand binding domain homologue RD1_RS20550 PF00884 Sulfatase RD1_RS20560 PF00310 Glutamine amidotransferases class-II RD1_RS20560 PF01645 Conserved region in glutamate synthase RD1_RS20560 PF04898 Glutamate synthase central domain RD1_RS20560 PF01493 GXGXG motif