RD1_RS00005 PF00909 Ammonium Transporter Family RD1_RS00010 PF01571 Aminomethyltransferase folate-binding domain RD1_RS00010 PF08669 Glycine cleavage T-protein C-terminal barrel domain RD1_RS00020 PF00111 2Fe-2S iron-sulfur cluster binding domain RD1_RS00020 PF00175 Oxidoreductase NAD-binding domain RD1_RS00025 PF11927 RD1_RS00025 RD1_RS00030 PF01381 Helix-turn-helix RD1_RS00030 PF07883 Cupin domain RD1_RS00035 PF01965 DJ-1/PfpI family RD1_RS00035 PF12833 Helix-turn-helix domain RD1_RS00040 PF04268 Sarcosine oxidase, gamma subunit family RD1_RS00045 PF01571 Aminomethyltransferase folate-binding domain RD1_RS00045 PF08669 Glycine cleavage T-protein C-terminal barrel domain RD1_RS00045 PF12831 FAD dependent oxidoreductase RD1_RS00045 PF13510 2Fe-2S iron-sulfur cluster binding domain RD1_RS00050 PF04267 Sarcosine oxidase, delta subunit family RD1_RS00055 PF01266 FAD dependent oxidoreductase RD1_RS00060 PF04069 Substrate binding domain of ABC-type glycine betaine transport system RD1_RS00065 PF00005 ABC transporter RD1_RS00070 PF00528 Binding-protein-dependent transport system inner membrane component RD1_RS00075 PF00849 RNA pseudouridylate synthase RD1_RS00080 PF01266 FAD dependent oxidoreductase RD1_RS00080 PF01571 Aminomethyltransferase folate-binding domain RD1_RS00080 PF08669 Glycine cleavage T-protein C-terminal barrel domain RD1_RS00080 PF16350 RD1_RS00080 RD1_RS00085 PF02574 Homocysteine S-methyltransferase RD1_RS00090 PF01266 FAD dependent oxidoreductase RD1_RS00090 PF01571 Aminomethyltransferase folate-binding domain RD1_RS00090 PF08669 Glycine cleavage T-protein C-terminal barrel domain RD1_RS00090 PF16350 RD1_RS00090 RD1_RS00095 PF01810 RD1_RS00095 RD1_RS00100 PF07883 Cupin domain RD1_RS00100 PF13560 Helix-turn-helix domain RD1_RS00105 PF13185 GAF domain RD1_RS00110 PF00108 Thiolase, N-terminal domain RD1_RS00110 PF02803 Thiolase, C-terminal domain RD1_RS00115 PF01740 STAS domain RD1_RS00120 PF13581 Histidine kinase-like ATPase domain RD1_RS00125 PF01019 Gamma-glutamyltranspeptidase RD1_RS00130 PF08755 Hemimethylated DNA-binding protein YccV like RD1_RS00135 PF03547 RD1_RS00135 RD1_RS00145 PF03548 Outer membrane lipoprotein carrier protein LolA RD1_RS00150 PF01580 FtsK/SpoIIIE family RD1_RS00150 PF09397 Ftsk gamma domain RD1_RS00150 PF13491 RD1_RS00150 RD1_RS00155 PF00155 Aminotransferase class I and II RD1_RS00160 PF01425 Amidase RD1_RS00165 PF01494 FAD binding domain RD1_RS00170 PF03966 Trm112p-like protein RD1_RS00175 PF02190 ATP-dependent protease La (LON) domain RD1_RS00180 PF00085 Thioredoxin RD1_RS00180 PF14559 Tetratricopeptide repeat RD1_RS00180 PF14561 Tetratricopeptide repeat RD1_RS00185 PF03372 Endonuclease/Exonuclease/phosphatase family RD1_RS00190 PF00072 Response regulator receiver domain RD1_RS00190 PF00486 Transcriptional regulatory protein, C terminal RD1_RS00195 PF00925 GTP cyclohydrolase II RD1_RS00200 PF03734 L,D-transpeptidase catalytic domain RD1_RS00205 PF01168 Alanine racemase, N-terminal domain RD1_RS00210 PF13609 Gram-negative porin RD1_RS00215 PF12100 RD1_RS00215 RD1_RS00220 PF00133 tRNA synthetases class I (I, L, M and V) RD1_RS00220 PF08264 Anticodon-binding domain of tRNA RD1_RS00220 PF09334 tRNA synthetases class I (M) RD1_RS00220 PF13603 Leucyl-tRNA synthetase, Domain 2 RD1_RS00225 PF04390 Lipopolysaccharide-assembly RD1_RS00235 PF00043 Glutathione S-transferase, C-terminal domain RD1_RS00235 PF13417 Glutathione S-transferase, N-terminal domain RD1_RS00240 PF03486 HI0933-like protein RD1_RS00245 PF00924 Mechanosensitive ion channel RD1_RS00250 PF01968 Hydantoinase/oxoprolinase RD1_RS00250 PF05378 RD1_RS00250 RD1_RS00255 PF08331 RD1_RS00255 RD1_RS00255 PF13484 RD1_RS00255 RD1_RS00260 PF13417 Glutathione S-transferase, N-terminal domain RD1_RS00260 PF14497 Glutathione S-transferase, C-terminal domain RD1_RS00265 PF00912 Transglycosylase RD1_RS00270 PF00310 Glutamine amidotransferases class-II RD1_RS00270 PF01493 GXGXG motif RD1_RS00270 PF01645 Conserved region in glutamate synthase RD1_RS00270 PF04898 Glutamate synthase central domain RD1_RS00275 PF04828 Glutathione-dependent formaldehyde-activating enzyme RD1_RS00280 PF04828 Glutathione-dependent formaldehyde-activating enzyme RD1_RS00285 PF07992 Pyridine nucleotide-disulphide oxidoreductase RD1_RS00285 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster RD1_RS00290 PF02673 RD1_RS00290 RD1_RS00295 PF01370 NAD dependent epimerase/dehydratase family RD1_RS00310 PF03625 Domain of unknown function DUF302 RD1_RS00320 PF02589 Uncharacterised ACR, YkgG family COG1556 RD1_RS00325 PF02589 Uncharacterised ACR, YkgG family COG1556 RD1_RS00325 PF11870 RD1_RS00325 RD1_RS00325 PF13183 4Fe-4S dicluster domain RD1_RS00330 PF02754 RD1_RS00330 RD1_RS00335 PF01565 FAD binding domain RD1_RS00335 PF09330 D-lactate dehydrogenase, membrane binding RD1_RS00340 PF04403 RD1_RS00340 RD1_RS00345 PF04403 RD1_RS00345 RD1_RS00350 PF02470 RD1_RS00350 RD1_RS00355 PF03886 Protein of unknown function (DUF330) RD1_RS00360 PF00155 Aminotransferase class I and II RD1_RS00365 PF00753 Metallo-beta-lactamase superfamily RD1_RS00375 PF01645 Conserved region in glutamate synthase RD1_RS00380 PF07568 RD1_RS00380 RD1_RS00385 PF04542 Sigma-70 region 2 RD1_RS00385 PF08281 Sigma-70, region 4 RD1_RS00390 PF00072 Response regulator receiver domain RD1_RS00395 PF03631 RD1_RS00395 RD1_RS00400 PF00266 Aminotransferase class-V RD1_RS00405 PF01546 Peptidase family M20/M25/M40 RD1_RS00405 PF07687 Peptidase dimerisation domain RD1_RS00410 PF02569 Pantoate-beta-alanine ligase RD1_RS00415 PF02548 Ketopantoate hydroxymethyltransferase RD1_RS00430 PF00850 Histone deacetylase domain RD1_RS00435 PF13673 Acetyltransferase (GNAT) domain RD1_RS00440 PF13561 Enoyl-(Acyl carrier protein) reductase RD1_RS00445 PF07883 Cupin domain RD1_RS00450 PF03576 Peptidase family S58 RD1_RS00455 PF02779 Transketolase, pyrimidine binding domain RD1_RS00455 PF02780 Transketolase, C-terminal domain RD1_RS00455 PF13292 1-deoxy-D-xylulose-5-phosphate synthase RD1_RS00460 PF02276 Photosynthetic reaction centre cytochrome C subunit RD1_RS00465 PF00124 Photosynthetic reaction centre protein RD1_RS00470 PF00124 Photosynthetic reaction centre protein RD1_RS00475 PF00556 Antenna complex alpha/beta subunit RD1_RS00480 PF00556 Antenna complex alpha/beta subunit RD1_RS00485 PF05398 RD1_RS00485 RD1_RS00490 PF00148 Nitrogenase component 1 type Oxidoreductase RD1_RS00490 PF08369 Proto-chlorophyllide reductase 57 kD subunit RD1_RS00495 PF00148 Nitrogenase component 1 type Oxidoreductase RD1_RS00500 PF00142 4Fe-4S iron sulfur cluster binding proteins, NifH/frxC family RD1_RS00505 PF08240 Alcohol dehydrogenase GroES-like domain RD1_RS00510 PF00891 O-methyltransferase RD1_RS00510 PF16864 RD1_RS00510 RD1_RS00515 PF00348 Polyprenyl synthetase RD1_RS00520 PF01593 Flavin containing amine oxidoreductase RD1_RS00535 PF03073 TspO/MBR family RD1_RS00540 PF00494 Squalene/phytoene synthase RD1_RS00545 PF01593 Flavin containing amine oxidoreductase RD1_RS00555 PF01078 Magnesium chelatase, subunit ChlI RD1_RS00560 PF13519 von Willebrand factor type A domain RD1_RS00565 PF12697 Alpha/beta hydrolase family RD1_RS00580 PF00155 Aminotransferase class I and II RD1_RS00585 PF12291 RD1_RS00585 RD1_RS00590 PF02915 Rubrerythrin RD1_RS00605 PF03703 RD1_RS00605 RD1_RS00610 PF03967 Photosynthetic reaction centre, H-chain N-terminal region RD1_RS00610 PF05239 PRC-barrel domain RD1_RS00615 PF03209 RD1_RS00615 RD1_RS00620 PF05175 Methyltransferase small domain RD1_RS00620 PF07109 Magnesium-protoporphyrin IX methyltransferase C-terminus RD1_RS00625 PF00142 4Fe-4S iron sulfur cluster binding proteins, NifH/frxC family RD1_RS00630 PF02514 RD1_RS00630 RD1_RS00630 PF11965 RD1_RS00630 RD1_RS00635 PF00148 Nitrogenase component 1 type Oxidoreductase RD1_RS00635 PF08369 Proto-chlorophyllide reductase 57 kD subunit RD1_RS00640 PF00148 Nitrogenase component 1 type Oxidoreductase RD1_RS00645 PF07284 RD1_RS00645 RD1_RS00650 PF02310 B12 binding domain RD1_RS00655 PF02954 Bacterial regulatory protein, Fis family RD1_RS00655 PF13188 PAS domain RD1_RS00655 PF13426 PAS domain RD1_RS00660 PF01040 UbiA prenyltransferase family RD1_RS00665 PF03209 RD1_RS00665 RD1_RS00670 PF01494 FAD binding domain RD1_RS00670 PF03486 HI0933-like protein RD1_RS00675 PF00293 NUDIX domain RD1_RS00680 PF01464 Transglycosylase SLT domain RD1_RS00685 PF00771 FHIPEP family RD1_RS00690 PF01311 RD1_RS00690 RD1_RS00695 PF01312 FlhB HrpN YscU SpaS Family RD1_RS00710 PF01527 Transposase RD1_RS00720 PF01527 Transposase RD1_RS00725 PF13276 RD1_RS00725 RD1_RS00725 PF13683 RD1_RS00725 RD1_RS00730 PF06748 Protein of unknown function (DUF1217) RD1_RS00735 PF07378 RD1_RS00735 RD1_RS00740 PF07309 RD1_RS00740 RD1_RS00745 PF00669 Bacterial flagellin N-terminal helical region RD1_RS00745 PF00700 Bacterial flagellin C-terminal helical region RD1_RS00755 PF10135 RD1_RS00755 RD1_RS00760 PF02120 Flagellar hook-length control protein FliK RD1_RS00765 PF03963 RD1_RS00765 RD1_RS00765 PF13860 FlgD Ig-like domain RD1_RS00770 PF01266 FAD dependent oxidoreductase RD1_RS00775 PF00528 Binding-protein-dependent transport system inner membrane component RD1_RS00780 PF00528 Binding-protein-dependent transport system inner membrane component RD1_RS00785 PF00005 ABC transporter RD1_RS00785 PF08402 TOBE domain RD1_RS00790 PF13416 Bacterial extracellular solute-binding protein RD1_RS00795 PF00392 Bacterial regulatory proteins, gntR family RD1_RS00795 PF07729 FCD domain RD1_RS00800 PF00202 Aminotransferase class-III RD1_RS00805 PF00005 ABC transporter RD1_RS00805 PF08402 TOBE domain RD1_RS00810 PF13416 Bacterial extracellular solute-binding protein RD1_RS00815 PF07045 Protein of unknown function (DUF1330) RD1_RS00820 PF00528 Binding-protein-dependent transport system inner membrane component RD1_RS00825 PF00528 Binding-protein-dependent transport system inner membrane component RD1_RS00830 PF01471 Putative peptidoglycan binding domain RD1_RS00830 PF13406 Transglycosylase SLT domain RD1_RS00835 PF13410 Glutathione S-transferase, C-terminal domain RD1_RS00835 PF17172 RD1_RS00835 RD1_RS00840 PF00575 S1 RNA binding domain RD1_RS00840 PF00773 RNB domain RD1_RS00845 PF09837 Uncharacterized protein conserved in bacteria (DUF2064) RD1_RS00850 PF01546 Peptidase family M20/M25/M40 RD1_RS00850 PF07687 Peptidase dimerisation domain RD1_RS00865 PF00132 Bacterial transferase hexapeptide (six repeats) RD1_RS00865 PF14602 Hexapeptide repeat of succinyl-transferase RD1_RS00865 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal RD1_RS00870 PF03641 Possible lysine decarboxylase RD1_RS00875 PF01323 DSBA-like thioredoxin domain RD1_RS00880 PF04055 Radical SAM superfamily RD1_RS00890 PF06089 RD1_RS00890 RD1_RS00895 PF12710 haloacid dehalogenase-like hydrolase RD1_RS00905 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain RD1_RS00905 PF01842 ACT domain RD1_RS00905 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain RD1_RS00910 PF00107 Zinc-binding dehydrogenase RD1_RS00910 PF08240 Alcohol dehydrogenase GroES-like domain RD1_RS00915 PF00155 Aminotransferase class I and II RD1_RS00920 PF01381 Helix-turn-helix RD1_RS00920 PF07883 Cupin domain RD1_RS00925 PF00108 Thiolase, N-terminal domain RD1_RS00925 PF02803 Thiolase, C-terminal domain RD1_RS00930 PF03109 RD1_RS00930 RD1_RS00935 PF01209 ubiE/COQ5 methyltransferase family RD1_RS00940 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain RD1_RS00940 PF06827 Zinc finger found in FPG and IleRS RD1_RS00940 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain RD1_RS00945 PF00378 Enoyl-CoA hydratase/isomerase family RD1_RS00950 PF03724 META domain RD1_RS00955 PF01649 Ribosomal protein S20 RD1_RS00960 PF00308 Bacterial dnaA protein RD1_RS00960 PF08299 Bacterial dnaA protein helix-turn-helix RD1_RS00960 PF11638 DnaA N-terminal domain RD1_RS00965 PF00712 DNA polymerase III beta subunit, N-terminal domain RD1_RS00965 PF02767 DNA polymerase III beta subunit, central domain RD1_RS00965 PF02768 DNA polymerase III beta subunit, C-terminal domain RD1_RS00970 PF02463 RecF/RecN/SMC N terminal domain RD1_RS00975 PF01810 RD1_RS00975 RD1_RS00980 PF00204 DNA gyrase B RD1_RS00980 PF00986 DNA gyrase B subunit, carboxyl terminus RD1_RS00980 PF01751 Toprim domain RD1_RS00980 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RD1_RS00985 PF00085 Thioredoxin RD1_RS00990 PF02683 RD1_RS00990 RD1_RS00995 PF04055 Radical SAM superfamily RD1_RS01000 PF03167 Uracil DNA glycosylase superfamily RD1_RS01000 PF13566 RD1_RS01000 RD1_RS01005 PF01408 Oxidoreductase family, NAD-binding Rossmann fold RD1_RS01005 PF02894 Oxidoreductase family, C-terminal alpha/beta domain RD1_RS01010 PF01116 Fructose-bisphosphate aldolase class-II RD1_RS01015 PF04962 KduI/IolB family RD1_RS01020 PF00294 pfkB family carbohydrate kinase RD1_RS01025 PF00205 Thiamine pyrophosphate enzyme, central domain RD1_RS01025 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain RD1_RS01025 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain RD1_RS01030 PF01408 Oxidoreductase family, NAD-binding Rossmann fold RD1_RS01030 PF02894 Oxidoreductase family, C-terminal alpha/beta domain RD1_RS01035 PF01261 Xylose isomerase-like TIM barrel RD1_RS01040 PF01408 Oxidoreductase family, NAD-binding Rossmann fold RD1_RS01040 PF02894 Oxidoreductase family, C-terminal alpha/beta domain RD1_RS01045 PF00027 Cyclic nucleotide-binding domain RD1_RS01050 PF00694 Aconitase C-terminal domain RD1_RS01055 PF03372 Endonuclease/Exonuclease/phosphatase family RD1_RS01060 PF00180 Isocitrate/isopropylmalate dehydrogenase RD1_RS01065 PF00892 EamA-like transporter family RD1_RS01070 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle RD1_RS01085 PF00356 Bacterial regulatory proteins, lacI family RD1_RS01085 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family RD1_RS01090 PF06224 RD1_RS01090 RD1_RS01100 PF13463 Winged helix DNA-binding domain RD1_RS01105 PF01266 FAD dependent oxidoreductase RD1_RS01110 PF03480 Bacterial extracellular solute-binding protein, family 7 RD1_RS01115 PF04290 RD1_RS01115 RD1_RS01120 PF06808 RD1_RS01120 RD1_RS01130 PF02682 Allophanate hydrolase subunit 1 RD1_RS01135 PF02626 Allophanate hydrolase subunit 2 RD1_RS01140 PF03746 LamB/YcsF family RD1_RS01145 PF00111 2Fe-2S iron-sulfur cluster binding domain RD1_RS01145 PF01799 [2Fe-2S] binding domain RD1_RS01150 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase RD1_RS01155 PF12833 Helix-turn-helix domain RD1_RS01160 PF12625 RD1_RS01160 RD1_RS01160 PF12833 Helix-turn-helix domain RD1_RS01165 PF00441 Acyl-CoA dehydrogenase, C-terminal domain RD1_RS01165 PF02770 Acyl-CoA dehydrogenase, middle domain RD1_RS01165 PF02771 Acyl-CoA dehydrogenase, N-terminal domain RD1_RS01170 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain RD1_RS01180 PF00460 Flagella basal body rod protein RD1_RS01180 PF06429 Flagellar basal body rod FlgEFG protein C-terminal RD1_RS01185 PF02049 RD1_RS01185 RD1_RS01190 PF01313 RD1_RS01190 RD1_RS01195 PF00460 Flagella basal body rod protein RD1_RS01195 PF06429 Flagellar basal body rod FlgEFG protein C-terminal RD1_RS01200 PF00460 Flagella basal body rod protein RD1_RS01200 PF06429 Flagellar basal body rod FlgEFG protein C-terminal RD1_RS01205 PF13144 SAF-like RD1_RS01210 PF02107 RD1_RS01210 RD1_RS01225 PF01527 Transposase RD1_RS01230 PF13683 RD1_RS01230 RD1_RS01235 PF00813 RD1_RS01235 RD1_RS01240 PF01052 Surface presentation of antigens (SPOA) RD1_RS01250 PF01514 Secretory protein of YscJ/FliF family RD1_RS01250 PF08345 RD1_RS01250 RD1_RS01255 PF03748 RD1_RS01255 RD1_RS01270 PF01618 RD1_RS01270 RD1_RS01285 PF00005 ABC transporter RD1_RS01290 PF00528 Binding-protein-dependent transport system inner membrane component RD1_RS01295 PF00528 Binding-protein-dependent transport system inner membrane component RD1_RS01300 PF13416 Bacterial extracellular solute-binding protein RD1_RS01305 PF02317 NAD/NADP octopine/nopaline dehydrogenase, alpha-helical domain RD1_RS01305 PF02558 Ketopantoate reductase PanE/ApbA RD1_RS01310 PF02627 Carboxymuconolactone decarboxylase family RD1_RS01320 PF13738 Pyridine nucleotide-disulphide oxidoreductase RD1_RS01325 PF07690 Major Facilitator Superfamily RD1_RS01330 PF01988 RD1_RS01330 RD1_RS01335 PF00378 Enoyl-CoA hydratase/isomerase family RD1_RS01340 PF00106 short chain dehydrogenase RD1_RS01345 PF09898 RD1_RS01345 RD1_RS01350 PF01523 Putative modulator of DNA gyrase RD1_RS01355 PF00459 Inositol monophosphatase family RD1_RS01360 PF13773 Domain of unknown function (DUF4170) RD1_RS01365 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) RD1_RS01370 PF02606 Tetraacyldisaccharide-1-P 4'-kinase RD1_RS01375 PF13462 Thioredoxin RD1_RS01380 PF05258 RD1_RS01380 RD1_RS01385 PF00633 Helix-hairpin-helix motif RD1_RS01385 PF00730 HhH-GPD superfamily base excision DNA repair protein RD1_RS01385 PF10576 Iron-sulfur binding domain of endonuclease III RD1_RS01385 PF14815 NUDIX domain RD1_RS01390 PF01555 DNA methylase RD1_RS01395 PF01351 Ribonuclease HII RD1_RS01415 PF03328 HpcH/HpaI aldolase/citrate lyase family RD1_RS01420 PF11294 RD1_RS01420 RD1_RS01425 PF01118 Semialdehyde dehydrogenase, NAD binding domain RD1_RS01425 PF02774 Semialdehyde dehydrogenase, dimerisation domain RD1_RS01435 PF03009 Glycerophosphoryl diester phosphodiesterase family RD1_RS01435 PF10110 RD1_RS01435 RD1_RS01450 PF05982 RD1_RS01450 RD1_RS01455 PF00484 Carbonic anhydrase RD1_RS01465 PF00883 Cytosol aminopeptidase family, catalytic domain RD1_RS01470 PF00877 NlpC/P60 family RD1_RS01475 PF10984 RD1_RS01475 RD1_RS01480 PF00817 impB/mucB/samB family RD1_RS01485 PF00440 Bacterial regulatory proteins, tetR family RD1_RS01485 PF14246 AefR-like transcriptional repressor, C-terminal region RD1_RS01490 PF03547 RD1_RS01490 RD1_RS01495 PF00756 Putative esterase RD1_RS01500 PF02639 RD1_RS01500 RD1_RS01505 PF13419 Haloacid dehalogenase-like hydrolase RD1_RS01510 PF02423 Ornithine cyclodeaminase/mu-crystallin family RD1_RS01515 PF12146 Putative lysophospholipase RD1_RS01520 PF07690 Major Facilitator Superfamily RD1_RS01525 PF03969 AFG1-like ATPase RD1_RS01530 PF08245 Mur ligase middle domain RD1_RS01535 PF01039 Carboxyl transferase domain RD1_RS01540 PF02517 CAAX protease self-immunity RD1_RS01550 PF00920 Dehydratase family RD1_RS01555 PF03572 Peptidase family S41 RD1_RS01555 PF13180 PDZ domain RD1_RS01565 PF01676 Metalloenzyme superfamily RD1_RS01565 PF06415 BPG-independent PGAM N-terminus (iPGM_N) RD1_RS01570 PF02811 PHP domain RD1_RS01570 PF07733 Bacterial DNA polymerase III alpha subunit RD1_RS01570 PF14579 Helix-hairpin-helix motif RD1_RS01585 PF02914 Bacteriophage Mu transposase RD1_RS01585 PF09039 Mu DNA binding, I gamma subdomain RD1_RS01590 PF13401 AAA domain RD1_RS01605 PF06252 RD1_RS01605 RD1_RS01610 PF10124 RD1_RS01610 RD1_RS01625 PF05069 RD1_RS01625 RD1_RS01635 PF00476 DNA polymerase family A RD1_RS01635 PF01367 5'-3' exonuclease, C-terminal SAM fold RD1_RS01635 PF01612 3'-5' exonuclease RD1_RS01635 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain RD1_RS01640 PF01261 Xylose isomerase-like TIM barrel RD1_RS01645 PF06938 Protein of unknown function (DUF1285) RD1_RS01650 PF07726 ATPase family associated with various cellular activities (AAA) RD1_RS01655 PF01882 RD1_RS01655 RD1_RS01660 PF07584 RD1_RS01660 RD1_RS01660 PF13709 Domain of unknown function (DUF4159) RD1_RS01670 PF00072 Response regulator receiver domain RD1_RS01670 PF00512 His Kinase A (phospho-acceptor) domain RD1_RS01670 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RD1_RS01670 PF12860 RD1_RS01670 RD1_RS01675 PF03883 RD1_RS01675 RD1_RS01680 PF00270 DEAD/DEAH box helicase RD1_RS01680 PF00271 Helicase conserved C-terminal domain RD1_RS01680 PF00570 HRDC domain RD1_RS01680 PF09382 RQC domain RD1_RS01680 PF16124 RD1_RS01680 RD1_RS01685 PF02325 RD1_RS01685 RD1_RS01690 PF11700 RD1_RS01690 RD1_RS01695 PF03411 Penicillin-insensitive murein endopeptidase RD1_RS01700 PF13449 Esterase-like activity of phytase RD1_RS01705 PF02592 RD1_RS01705 RD1_RS01710 PF00472 RF-1 domain RD1_RS01715 PF01612 3'-5' exonuclease RD1_RS01720 PF00571 CBS domain RD1_RS01720 PF01380 SIS domain RD1_RS01730 PF03968 OstA-like protein RD1_RS01735 PF00005 ABC transporter RD1_RS01735 PF12399 Branched-chain amino acid ATP-binding cassette transporter RD1_RS01740 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein RD1_RS01740 PF16321 RD1_RS01740 RD1_RS01745 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 RD1_RS01750 PF00483 Nucleotidyl transferase RD1_RS01755 PF02348 Cytidylyltransferase RD1_RS01760 PF00459 Inositol monophosphatase family RD1_RS01765 PF13532 2OG-Fe(II) oxygenase superfamily RD1_RS01770 PF00012 Hsp70 protein RD1_RS01775 PF00226 DnaJ domain RD1_RS01775 PF00684 DnaJ central domain RD1_RS01775 PF01556 DnaJ C terminal domain RD1_RS01780 PF00271 Helicase conserved C-terminal domain RD1_RS01780 PF01043 SecA preprotein cross-linking domain RD1_RS01780 PF02810 SEC-C motif RD1_RS01780 PF07516 SecA Wing and Scaffold domain RD1_RS01780 PF07517 SecA DEAD-like domain RD1_RS01785 PF13616 PPIC-type PPIASE domain RD1_RS01790 PF01960 ArgJ family RD1_RS01795 PF00293 NUDIX domain RD1_RS01800 PF00009 Elongation factor Tu GTP binding domain RD1_RS01800 PF04760 Translation initiation factor IF-2, N-terminal region RD1_RS01800 PF08364 RD1_RS01800 RD1_RS01800 PF11987 Translation-initiation factor 2 RD1_RS01805 PF04296 Protein of unknown function (DUF448) RD1_RS01810 PF08529 NusA N-terminal domain RD1_RS01810 PF13184 NusA-like KH domain RD1_RS01810 PF14520 Helix-hairpin-helix domain RD1_RS01815 PF02576 Uncharacterised BCR, YhbC family COG0779 RD1_RS01820 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle RD1_RS01825 PF00561 alpha/beta hydrolase fold RD1_RS01830 PF13489 Methyltransferase domain RD1_RS01835 PF12802 MarR family RD1_RS01840 PF00795 Carbon-nitrogen hydrolase RD1_RS01845 PF00462 Glutaredoxin RD1_RS01850 PF00156 Phosphoribosyl transferase domain RD1_RS01855 PF08241 Methyltransferase domain RD1_RS01860 PF00762 Ferrochelatase RD1_RS01870 PF03734 L,D-transpeptidase catalytic domain RD1_RS01875 PF00188 Cysteine-rich secretory protein family RD1_RS01880 PF03734 L,D-transpeptidase catalytic domain RD1_RS01885 PF00520 Ion transport protein RD1_RS01890 PF05958 tRNA (Uracil-5-)-methyltransferase RD1_RS01895 PF00005 ABC transporter RD1_RS01895 PF00664 ABC transporter transmembrane region RD1_RS01900 PF00005 ABC transporter RD1_RS01900 PF00664 ABC transporter transmembrane region RD1_RS01905 PF01743 Poly A polymerase head domain RD1_RS01905 PF12627 Probable RNA and SrmB- binding site of polymerase A RD1_RS01910 PF00293 NUDIX domain RD1_RS01915 PF01430 Hsp33 protein RD1_RS01920 PF00293 NUDIX domain RD1_RS01925 PF00072 Response regulator receiver domain RD1_RS01925 PF07228 Stage II sporulation protein E (SpoIIE) RD1_RS01930 PF01627 Hpt domain RD1_RS01935 PF00106 short chain dehydrogenase RD1_RS01940 PF00291 Pyridoxal-phosphate dependent enzyme RD1_RS01940 PF00585 C-terminal regulatory domain of Threonine dehydratase RD1_RS01945 PF00764 Arginosuccinate synthase RD1_RS01955 PF01625 Peptide methionine sulfoxide reductase RD1_RS01960 PF00294 pfkB family carbohydrate kinase RD1_RS01965 PF00390 Malic enzyme, N-terminal domain RD1_RS01965 PF01515 Phosphate acetyl/butaryl transferase RD1_RS01965 PF03949 Malic enzyme, NAD binding domain RD1_RS01970 PF00488 MutS domain V RD1_RS01970 PF01624 MutS domain I RD1_RS01970 PF05188 MutS domain II RD1_RS01970 PF05190 MutS family domain IV RD1_RS01970 PF05192 MutS domain III RD1_RS01975 PF01025 GrpE RD1_RS01980 PF01628 HrcA protein C terminal domain RD1_RS01985 PF01138 3' exoribonuclease family, domain 1 RD1_RS01985 PF03725 3' exoribonuclease family, domain 2 RD1_RS01990 PF01725 Ham1 family RD1_RS01995 PF04055 Radical SAM superfamily RD1_RS01995 PF06969 HemN C-terminal domain RD1_RS02000 PF02195 ParB-like nuclease domain RD1_RS02005 PF13614 AAA domain RD1_RS02010 PF02527 rRNA small subunit methyltransferase G RD1_RS02015 PF01134 Glucose inhibited division protein A RD1_RS02015 PF13932 GidA associated domain 3 RD1_RS02020 PF01926 50S ribosome-binding GTPase RD1_RS02020 PF10396 GTP-binding protein TrmE N-terminus RD1_RS02020 PF12631 Catalytic cysteine-containing C-terminus of GTPase, MnmE RD1_RS02025 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain RD1_RS02025 PF07497 Rho termination factor, RNA-binding domain RD1_RS02025 PF07498 Rho termination factor, N-terminal domain RD1_RS02030 PF03653 RD1_RS02030 RD1_RS02035 PF02545 Maf-like protein RD1_RS02040 PF01488 Shikimate / quinate 5-dehydrogenase RD1_RS02040 PF08501 Shikimate dehydrogenase substrate binding domain RD1_RS02045 PF01121 Dephospho-CoA kinase RD1_RS02050 PF00929 Exonuclease RD1_RS02055 PF02556 Preprotein translocase subunit SecB RD1_RS02060 PF04186 RD1_RS02060 RD1_RS02065 PF04280 Tim44-like domain RD1_RS02070 PF01713 Smr domain RD1_RS02075 PF07690 Major Facilitator Superfamily RD1_RS02080 PF00004 ATPase family associated with various cellular activities (AAA) RD1_RS02080 PF07724 AAA domain (Cdc48 subfamily) RD1_RS02090 PF00227 Proteasome subunit RD1_RS02095 PF00085 Thioredoxin RD1_RS02100 PF00580 UvrD/REP helicase N-terminal domain RD1_RS02100 PF12705 PD-(D/E)XK nuclease superfamily RD1_RS02100 PF13361 UvrD-like helicase C-terminal domain RD1_RS02105 PF12705 PD-(D/E)XK nuclease superfamily RD1_RS02110 PF12804 MobA-like NTP transferase domain RD1_RS02115 PF01636 Phosphotransferase enzyme family RD1_RS02120 PF02367 Uncharacterised P-loop hydrolase UPF0079 RD1_RS02125 PF12860 RD1_RS02125 RD1_RS02125 PF13188 PAS domain RD1_RS02135 PF02630 SCO1/SenC RD1_RS02140 PF00072 Response regulator receiver domain RD1_RS02140 PF02954 Bacterial regulatory protein, Fis family RD1_RS02145 PF01966 HD domain RD1_RS02150 PF01501 Glycosyl transferase family 8 RD1_RS02155 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain RD1_RS02155 PF05221 S-adenosyl-L-homocysteine hydrolase RD1_RS02160 PF11015 Protein of unknown function (DUF2853) RD1_RS02165 PF01878 EVE domain RD1_RS02170 PF03795 YCII-related domain RD1_RS02175 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus RD1_RS02175 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus RD1_RS02180 PF00814 Glycoprotease family RD1_RS02185 PF02602 Uroporphyrinogen-III synthase HemD RD1_RS02190 PF09731 RD1_RS02190 RD1_RS02195 PF07219 RD1_RS02195 RD1_RS02195 PF14559 Tetratricopeptide repeat RD1_RS02205 PF00487 RD1_RS02205 RD1_RS02210 PF00378 Enoyl-CoA hydratase/isomerase family RD1_RS02215 PF10983 RD1_RS02215 RD1_RS02225 PF00353 Hemolysin-type calcium-binding repeat (2 copies) RD1_RS02230 PF08808 RD1_RS02230 RD1_RS02235 PF09722 RD1_RS02235 RD1_RS02240 PF05721 Phytanoyl-CoA dioxygenase (PhyH) RD1_RS02245 PF04962 KduI/IolB family RD1_RS02250 PF00005 ABC transporter RD1_RS02255 PF02653 RD1_RS02255 RD1_RS02260 PF13407 Periplasmic binding protein domain RD1_RS02265 PF00356 Bacterial regulatory proteins, lacI family RD1_RS02265 PF13377 Periplasmic binding protein-like domain RD1_RS02275 PF03734 L,D-transpeptidase catalytic domain RD1_RS02280 PF00578 AhpC/TSA family RD1_RS02295 PF02469 Fasciclin domain RD1_RS02310 PF03372 Endonuclease/Exonuclease/phosphatase family RD1_RS02315 PF04773 FecR protein RD1_RS02320 PF00211 Adenylate and Guanylate cyclase catalytic domain RD1_RS02320 PF05226 RD1_RS02320 RD1_RS02325 PF01261 Xylose isomerase-like TIM barrel RD1_RS02330 PF06187 Protein of unknown function (DUF993) RD1_RS02335 PF13561 Enoyl-(Acyl carrier protein) reductase RD1_RS02340 PF00441 Acyl-CoA dehydrogenase, C-terminal domain RD1_RS02340 PF02770 Acyl-CoA dehydrogenase, middle domain RD1_RS02340 PF02771 Acyl-CoA dehydrogenase, N-terminal domain RD1_RS02345 PF00248 Aldo/keto reductase family RD1_RS02350 PF01575 MaoC like domain RD1_RS02355 PF07876 Stress responsive A/B Barrel Domain RD1_RS02360 PF00378 Enoyl-CoA hydratase/isomerase family RD1_RS02365 PF01144 Coenzyme A transferase RD1_RS02370 PF00248 Aldo/keto reductase family RD1_RS02375 PF00732 GMC oxidoreductase RD1_RS02375 PF05199 GMC oxidoreductase RD1_RS02380 PF03079 ARD/ARD' family RD1_RS02385 PF00107 Zinc-binding dehydrogenase RD1_RS02385 PF08240 Alcohol dehydrogenase GroES-like domain RD1_RS02390 PF00440 Bacterial regulatory proteins, tetR family RD1_RS02395 PF00005 ABC transporter RD1_RS02400 PF00528 Binding-protein-dependent transport system inner membrane component RD1_RS02405 PF00528 Binding-protein-dependent transport system inner membrane component RD1_RS02410 PF01547 Bacterial extracellular solute-binding protein RD1_RS02415 PF13435 Cytochrome c554 and c-prime RD1_RS02415 PF13646 HEAT repeats RD1_RS02420 PF13584 RD1_RS02420 RD1_RS02425 PF13519 von Willebrand factor type A domain RD1_RS02430 PF00092 von Willebrand factor type A domain RD1_RS02435 PF14316 RD1_RS02435 RD1_RS02440 PF01882 RD1_RS02440 RD1_RS02445 PF07726 ATPase family associated with various cellular activities (AAA) RD1_RS02450 PF12710 haloacid dehalogenase-like hydrolase RD1_RS02455 PF00884 Sulfatase RD1_RS02455 PF14707 C-terminal region of aryl-sulfatase RD1_RS02460 PF06240 Carbon monoxide dehydrogenase subunit G (CoxG) RD1_RS02465 PF00753 Metallo-beta-lactamase superfamily RD1_RS02470 PF00581 Rhodanese-like domain RD1_RS02475 PF01593 Flavin containing amine oxidoreductase RD1_RS02475 PF13450 NAD(P)-binding Rossmann-like domain RD1_RS02480 PF12973 ChrR Cupin-like domain RD1_RS02485 PF02633 Creatinine amidohydrolase RD1_RS02490 PF00293 NUDIX domain RD1_RS02495 PF01891 Cobalt uptake substrate-specific transmembrane region RD1_RS02500 PF13458 Periplasmic binding protein RD1_RS02505 PF02653 RD1_RS02505 RD1_RS02510 PF02653 RD1_RS02510 RD1_RS02515 PF00005 ABC transporter RD1_RS02515 PF12399 Branched-chain amino acid ATP-binding cassette transporter RD1_RS02520 PF00005 ABC transporter RD1_RS02525 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily RD1_RS02530 PF00501 AMP-binding enzyme RD1_RS02530 PF13193 AMP-binding enzyme C-terminal domain RD1_RS02535 PF01758 Sodium Bile acid symporter family RD1_RS02540 PF02779 Transketolase, pyrimidine binding domain RD1_RS02540 PF02780 Transketolase, C-terminal domain RD1_RS02540 PF13292 1-deoxy-D-xylulose-5-phosphate synthase RD1_RS02545 PF00348 Polyprenyl synthetase RD1_RS02550 PF02609 Exonuclease VII small subunit RD1_RS02555 PF00072 Response regulator receiver domain RD1_RS02555 PF00486 Transcriptional regulatory protein, C terminal RD1_RS02560 PF12802 MarR family RD1_RS02565 PF01063 Aminotransferase class IV RD1_RS02570 PF12680 SnoaL-like domain RD1_RS02575 PF00892 EamA-like transporter family RD1_RS02580 PF01264 Chorismate synthase RD1_RS02585 PF13343 Bacterial extracellular solute-binding protein RD1_RS02595 PF00005 ABC transporter RD1_RS02600 PF00885 6,7-dimethyl-8-ribityllumazine synthase RD1_RS02605 PF04299 Putative FMN-binding domain RD1_RS02610 PF13417 Glutathione S-transferase, N-terminal domain RD1_RS02615 PF00355 Rieske [2Fe-2S] domain RD1_RS02615 PF10399 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal RD1_RS02620 PF00032 Cytochrome b(C-terminal)/b6/petD RD1_RS02620 PF00033 Cytochrome b(N-terminal)/b6/petB RD1_RS02625 PF02167 Cytochrome C1 family RD1_RS02630 PF07690 Major Facilitator Superfamily RD1_RS02640 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family RD1_RS02645 PF13469 Sulfotransferase family RD1_RS02650 PF03706 RD1_RS02650 RD1_RS02655 PF08889 RD1_RS02655 RD1_RS02660 PF13469 Sulfotransferase family RD1_RS02665 PF13489 Methyltransferase domain RD1_RS02670 PF00535 Glycosyl transferase family 2 RD1_RS02675 PF02119 RD1_RS02675 RD1_RS02680 PF00700 Bacterial flagellin C-terminal helical region RD1_RS02685 PF00460 Flagella basal body rod protein RD1_RS02685 PF06429 Flagellar basal body rod FlgEFG protein C-terminal RD1_RS02690 PF00460 Flagella basal body rod protein RD1_RS02690 PF06429 Flagellar basal body rod FlgEFG protein C-terminal RD1_RS02690 PF07559 Flagellar basal body protein FlaE RD1_RS02695 PF13677 RD1_RS02695 RD1_RS02700 PF00581 Rhodanese-like domain RD1_RS02705 PF00857 Isochorismatase family RD1_RS02710 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family RD1_RS02720 PF13437 HlyD family secretion protein RD1_RS02720 PF13533 Biotin-lipoyl like RD1_RS02725 PF00005 ABC transporter RD1_RS02725 PF00664 ABC transporter transmembrane region RD1_RS02730 PF00005 ABC transporter RD1_RS02730 PF00664 ABC transporter transmembrane region RD1_RS02735 PF00353 Hemolysin-type calcium-binding repeat (2 copies) RD1_RS02735 PF13385 Concanavalin A-like lectin/glucanases superfamily RD1_RS02740 PF01625 Peptide methionine sulfoxide reductase RD1_RS02745 PF01641 SelR domain RD1_RS02750 PF00255 Glutathione peroxidase RD1_RS02755 PF08241 Methyltransferase domain RD1_RS02760 PF00892 EamA-like transporter family RD1_RS02765 PF01810 RD1_RS02765 RD1_RS02770 PF00216 Bacterial DNA-binding protein RD1_RS02775 PF01048 Phosphorylase superfamily RD1_RS02775 PF10423 Bacterial AMP nucleoside phosphorylase N-terminus RD1_RS02780 PF01979 Amidohydrolase family RD1_RS02780 PF13382 Adenine deaminase C-terminal domain RD1_RS02790 PF01266 FAD dependent oxidoreductase RD1_RS02790 PF01571 Aminomethyltransferase folate-binding domain RD1_RS02790 PF08669 Glycine cleavage T-protein C-terminal barrel domain RD1_RS02790 PF16350 RD1_RS02790 RD1_RS02795 PF00596 Class II Aldolase and Adducin N-terminal domain RD1_RS02800 PF04116 RD1_RS02800 RD1_RS02805 PF00441 Acyl-CoA dehydrogenase, C-terminal domain RD1_RS02805 PF02770 Acyl-CoA dehydrogenase, middle domain RD1_RS02805 PF02771 Acyl-CoA dehydrogenase, N-terminal domain RD1_RS02810 PF13380 CoA binding domain RD1_RS02810 PF13549 ATP-grasp domain RD1_RS02810 PF13607 Succinyl-CoA ligase like flavodoxin domain RD1_RS02815 PF00378 Enoyl-CoA hydratase/isomerase family RD1_RS02830 PF00330 Aconitase family (aconitate hydratase) RD1_RS02835 PF00924 Mechanosensitive ion channel RD1_RS02845 PF02410 Oligomerisation domain RD1_RS02850 PF02590 Predicted SPOUT methyltransferase RD1_RS02865 PF04654 RD1_RS02865 RD1_RS02870 PF01565 FAD binding domain RD1_RS02870 PF02913 FAD linked oxidases, C-terminal domain RD1_RS02875 PF01565 FAD binding domain RD1_RS02880 PF02754 RD1_RS02880 RD1_RS02880 PF12838 4Fe-4S dicluster domain RD1_RS02885 PF00089 Trypsin RD1_RS02890 PF00011 Hsp20/alpha crystallin family RD1_RS02900 PF13458 Periplasmic binding protein RD1_RS02905 PF00743 Flavin-binding monooxygenase-like RD1_RS02910 PF00171 Aldehyde dehydrogenase family RD1_RS02915 PF00578 AhpC/TSA family RD1_RS02915 PF10417 C-terminal domain of 1-Cys peroxiredoxin RD1_RS02920 PF13641 Glycosyltransferase like family 2 RD1_RS02925 PF00535 Glycosyl transferase family 2 RD1_RS02930 PF00013 KH domain RD1_RS02930 PF00575 S1 RNA binding domain RD1_RS02930 PF01138 3' exoribonuclease family, domain 1 RD1_RS02930 PF03725 3' exoribonuclease family, domain 2 RD1_RS02930 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain RD1_RS02935 PF01235 RD1_RS02935 RD1_RS02940 PF00582 Universal stress protein family RD1_RS02945 PF01810 RD1_RS02945 RD1_RS02950 PF00312 Ribosomal protein S15 RD1_RS02965 PF07799 RD1_RS02965 RD1_RS02975 PF01509 TruB family pseudouridylate synthase (N terminal domain) RD1_RS02975 PF16198 RD1_RS02975 RD1_RS02980 PF09992 Predicted periplasmic protein (DUF2233) RD1_RS02985 PF02033 Ribosome-binding factor A RD1_RS02990 PF01113 Dihydrodipicolinate reductase, N-terminus RD1_RS02990 PF05173 Dihydrodipicolinate reductase, C-terminus RD1_RS03000 PF07896 Protein of unknown function (DUF1674) RD1_RS03005 PF01029 NusB family RD1_RS03005 PF01189 NOL1/NOP2/sun family RD1_RS03010 PF07940 Heparinase II/III-like protein RD1_RS03015 PF01808 AICARFT/IMPCHase bienzyme RD1_RS03015 PF02142 MGS-like domain RD1_RS03020 PF01252 RD1_RS03020 RD1_RS03025 PF11233 RD1_RS03025 RD1_RS03030 PF00675 Insulinase (Peptidase family M16) RD1_RS03030 PF05193 Peptidase M16 inactive domain RD1_RS03035 PF05193 Peptidase M16 inactive domain RD1_RS03040 PF00171 Aldehyde dehydrogenase family RD1_RS03045 PF01791 DeoC/LacD family aldolase RD1_RS03050 PF01119 DNA mismatch repair protein, C-terminal domain RD1_RS03050 PF08676 MutL C terminal dimerisation domain RD1_RS03050 PF13589 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RD1_RS03055 PF02646 RD1_RS03055 RD1_RS03060 PF03786 D-mannonate dehydratase (UxuA) RD1_RS03065 PF01408 Oxidoreductase family, NAD-binding Rossmann fold RD1_RS03065 PF02894 Oxidoreductase family, C-terminal alpha/beta domain RD1_RS03070 PF01408 Oxidoreductase family, NAD-binding Rossmann fold RD1_RS03070 PF02894 Oxidoreductase family, C-terminal alpha/beta domain RD1_RS03075 PF01408 Oxidoreductase family, NAD-binding Rossmann fold RD1_RS03075 PF02894 Oxidoreductase family, C-terminal alpha/beta domain RD1_RS03080 PF00294 pfkB family carbohydrate kinase RD1_RS03085 PF00892 EamA-like transporter family RD1_RS03090 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase RD1_RS03090 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase RD1_RS03095 PF05721 Phytanoyl-CoA dioxygenase (PhyH) RD1_RS03100 PF01408 Oxidoreductase family, NAD-binding Rossmann fold RD1_RS03100 PF02894 Oxidoreductase family, C-terminal alpha/beta domain RD1_RS03105 PF04295 RD1_RS03105 RD1_RS03105 PF08666 SAF domain RD1_RS03110 PF05721 Phytanoyl-CoA dioxygenase (PhyH) RD1_RS03115 PF06808 RD1_RS03115 RD1_RS03120 PF04290 RD1_RS03120 RD1_RS03125 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain RD1_RS03125 PF13378 Enolase C-terminal domain-like RD1_RS03130 PF03480 Bacterial extracellular solute-binding protein, family 7 RD1_RS03135 PF00392 Bacterial regulatory proteins, gntR family RD1_RS03135 PF07729 FCD domain RD1_RS03140 PF01370 NAD dependent epimerase/dehydratase family RD1_RS03145 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase RD1_RS03145 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase RD1_RS03150 PF13561 Enoyl-(Acyl carrier protein) reductase RD1_RS03155 PF00920 Dehydratase family RD1_RS03160 PF01557 Fumarylacetoacetate (FAA) hydrolase family RD1_RS03165 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain RD1_RS03165 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain RD1_RS03170 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain RD1_RS03170 PF13378 Enolase C-terminal domain-like RD1_RS03175 PF12973 ChrR Cupin-like domain RD1_RS03180 PF04542 Sigma-70 region 2 RD1_RS03180 PF04545 Sigma-70, region 4 RD1_RS03185 PF01593 Flavin containing amine oxidoreductase RD1_RS03190 PF07103 RD1_RS03190 RD1_RS03195 PF13347 MFS/sugar transport protein RD1_RS03200 PF12915 RD1_RS03200 RD1_RS03205 PF00106 short chain dehydrogenase RD1_RS03210 PF05222 Alanine dehydrogenase/PNT, N-terminal domain RD1_RS03215 PF02798 Glutathione S-transferase, N-terminal domain RD1_RS03215 PF14497 Glutathione S-transferase, C-terminal domain RD1_RS03220 PF00300 Histidine phosphatase superfamily (branch 1) RD1_RS03225 PF00501 AMP-binding enzyme RD1_RS03230 PF00005 ABC transporter RD1_RS03230 PF12399 Branched-chain amino acid ATP-binding cassette transporter RD1_RS03235 PF02653 RD1_RS03235 RD1_RS03240 PF09851 RD1_RS03240 RD1_RS03245 PF02653 RD1_RS03245 RD1_RS03250 PF13458 Periplasmic binding protein RD1_RS03255 PF00005 ABC transporter RD1_RS03260 PF00501 AMP-binding enzyme RD1_RS03260 PF14535 AMP-binding enzyme C-terminal domain RD1_RS03275 PF07885 Ion channel RD1_RS03290 PF05013 N-formylglutamate amidohydrolase RD1_RS03295 PF00817 impB/mucB/samB family RD1_RS03295 PF11799 impB/mucB/samB family C-terminal domain RD1_RS03300 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family RD1_RS03305 PF00004 ATPase family associated with various cellular activities (AAA) RD1_RS03305 PF02861 Clp amino terminal domain RD1_RS03305 PF07724 AAA domain (Cdc48 subfamily) RD1_RS03305 PF10431 C-terminal, D2-small domain, of ClpB protein RD1_RS03310 PF02469 Fasciclin domain RD1_RS03320 PF13419 Haloacid dehalogenase-like hydrolase RD1_RS03325 PF00174 Oxidoreductase molybdopterin binding domain RD1_RS03330 PF01794 RD1_RS03330 RD1_RS03370 PF13664 RD1_RS03370 RD1_RS03385 PF06808 RD1_RS03385 RD1_RS03390 PF04290 RD1_RS03390 RD1_RS03395 PF03480 Bacterial extracellular solute-binding protein, family 7 RD1_RS03400 PF00392 Bacterial regulatory proteins, gntR family RD1_RS03400 PF07729 FCD domain RD1_RS03405 PF00701 Dihydrodipicolinate synthetase family RD1_RS03410 PF00294 pfkB family carbohydrate kinase RD1_RS03415 PF08543 Phosphomethylpyrimidine kinase RD1_RS03420 PF01266 FAD dependent oxidoreductase RD1_RS03425 PF02597 ThiS family RD1_RS03430 PF05690 Thiazole biosynthesis protein ThiG RD1_RS03435 PF02581 Thiamine monophosphate synthase/TENI RD1_RS03440 PF00899 ThiF family RD1_RS03445 PF09084 NMT1/THI5 like RD1_RS03450 PF03070 TENA/THI-4/PQQC family RD1_RS03455 PF00005 ABC transporter RD1_RS03460 PF03070 TENA/THI-4/PQQC family RD1_RS03465 PF00528 Binding-protein-dependent transport system inner membrane component RD1_RS03480 PF16576 RD1_RS03480 RD1_RS03485 PF00873 AcrB/AcrD/AcrF family RD1_RS03490 PF00873 AcrB/AcrD/AcrF family RD1_RS03495 PF00873 AcrB/AcrD/AcrF family RD1_RS03510 PF02447 RD1_RS03510 RD1_RS03515 PF01734 Patatin-like phospholipase RD1_RS03520 PF05787 Bacterial protein of unknown function (DUF839) RD1_RS03525 PF14238 RD1_RS03525 RD1_RS03530 PF09822 RD1_RS03530 RD1_RS03535 PF12698 ABC-2 family transporter protein RD1_RS03540 PF00005 ABC transporter RD1_RS03545 PF00118 TCP-1/cpn60 chaperonin family RD1_RS03550 PF00166 Chaperonin 10 Kd subunit RD1_RS03555 PF13180 PDZ domain RD1_RS03555 PF13365 Trypsin-like peptidase domain RD1_RS03560 PF01435 Peptidase family M48 RD1_RS03585 PF00916 RD1_RS03585 RD1_RS03585 PF01740 STAS domain RD1_RS03590 PF04273 Putative phosphatase (DUF442) RD1_RS03590 PF07992 Pyridine nucleotide-disulphide oxidoreductase RD1_RS03595 PF00753 Metallo-beta-lactamase superfamily RD1_RS03605 PF04143 RD1_RS03605 RD1_RS03610 PF11127 Protein of unknown function (DUF2892) RD1_RS03615 PF00027 Cyclic nucleotide-binding domain RD1_RS03615 PF13545 Crp-like helix-turn-helix domain RD1_RS03620 PF02082 Transcriptional regulator RD1_RS03635 PF01654 RD1_RS03635 RD1_RS03640 PF02322 RD1_RS03640 RD1_RS03645 PF06527 RD1_RS03645 RD1_RS03650 PF05621 RD1_RS03650 RD1_RS03655 PF09299 Mu transposase, C-terminal RD1_RS03660 PF08722 TnsA endonuclease N terminal RD1_RS03665 PF14072 RD1_RS03665 RD1_RS03670 PF01507 Phosphoadenosine phosphosulfate reductase family RD1_RS03675 PF13476 AAA domain RD1_RS03680 PF08870 Domain of unknown function (DUF1832) RD1_RS03685 PF00266 Aminotransferase class-V RD1_RS03700 PF04545 Sigma-70, region 4 RD1_RS03705 PF00271 Helicase conserved C-terminal domain RD1_RS03705 PF04851 Type III restriction enzyme, res subunit RD1_RS03715 PF13476 AAA domain RD1_RS03730 PF14072 RD1_RS03730 RD1_RS03745 PF01381 Helix-turn-helix RD1_RS03755 PF01678 Diaminopimelate epimerase RD1_RS03760 PF00919 Uncharacterized protein family UPF0004 RD1_RS03760 PF04055 Radical SAM superfamily RD1_RS03765 PF03992 Antibiotic biosynthesis monooxygenase RD1_RS03775 PF00089 Trypsin RD1_RS03780 PF01177 Asp/Glu/Hydantoin racemase RD1_RS03785 PF00291 Pyridoxal-phosphate dependent enzyme RD1_RS03790 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RD1_RS03790 PF03466 LysR substrate binding domain RD1_RS03795 PF01515 Phosphate acetyl/butaryl transferase RD1_RS03800 PF05899 Protein of unknown function (DUF861) RD1_RS03805 PF03601 RD1_RS03805 RD1_RS03810 PF00205 Thiamine pyrophosphate enzyme, central domain RD1_RS03810 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain RD1_RS03810 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain RD1_RS03815 PF01266 FAD dependent oxidoreductase RD1_RS03820 PF12680 SnoaL-like domain RD1_RS03825 PF00582 Universal stress protein family RD1_RS03830 PF06808 RD1_RS03830 RD1_RS03835 PF04290 RD1_RS03835 RD1_RS03840 PF03480 Bacterial extracellular solute-binding protein, family 7 RD1_RS03845 PF00155 Aminotransferase class I and II RD1_RS03845 PF00392 Bacterial regulatory proteins, gntR family RD1_RS03850 PF01925 RD1_RS03850 RD1_RS03855 PF01381 Helix-turn-helix RD1_RS03855 PF07883 Cupin domain RD1_RS03860 PF00202 Aminotransferase class-III RD1_RS03865 PF00171 Aldehyde dehydrogenase family RD1_RS03870 PF00871 Acetokinase family RD1_RS03875 PF01515 Phosphate acetyl/butaryl transferase RD1_RS03880 PF03417 Acyl-coenzyme A:6-aminopenicillanic acid acyl-transferase RD1_RS03895 PF03480 Bacterial extracellular solute-binding protein, family 7 RD1_RS03900 PF04290 RD1_RS03900 RD1_RS03905 PF06808 RD1_RS03905 RD1_RS03915 PF00795 Carbon-nitrogen hydrolase RD1_RS03920 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily RD1_RS03925 PF00392 Bacterial regulatory proteins, gntR family RD1_RS03925 PF07729 FCD domain RD1_RS03930 PF13458 Periplasmic binding protein RD1_RS03935 PF02653 RD1_RS03935 RD1_RS03940 PF02653 RD1_RS03940 RD1_RS03945 PF00005 ABC transporter RD1_RS03945 PF12399 Branched-chain amino acid ATP-binding cassette transporter RD1_RS03950 PF00005 ABC transporter RD1_RS03955 PF01177 Asp/Glu/Hydantoin racemase RD1_RS03965 PF13407 Periplasmic binding protein domain RD1_RS03970 PF00005 ABC transporter RD1_RS03975 PF02653 RD1_RS03975 RD1_RS03980 PF02653 RD1_RS03980 RD1_RS03985 PF08450 SMP-30/Gluconolaconase/LRE-like region RD1_RS03990 PF00353 Hemolysin-type calcium-binding repeat (2 copies) RD1_RS04000 PF07726 ATPase family associated with various cellular activities (AAA) RD1_RS04005 PF01882 RD1_RS04005 RD1_RS04015 PF00092 von Willebrand factor type A domain RD1_RS04030 PF13584 RD1_RS04030 RD1_RS04035 PF00072 Response regulator receiver domain RD1_RS04035 PF00196 Bacterial regulatory proteins, luxR family RD1_RS04040 PF08495 RD1_RS04040 RD1_RS04040 PF10442 RD1_RS04040 RD1_RS04045 PF00072 Response regulator receiver domain RD1_RS04045 PF00512 His Kinase A (phospho-acceptor) domain RD1_RS04045 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RD1_RS04045 PF12860 RD1_RS04045 RD1_RS04060 PF08770 Sulphur oxidation protein SoxZ RD1_RS04060 PF13501 Sulfur oxidation protein SoxY RD1_RS04065 PF00753 Metallo-beta-lactamase superfamily RD1_RS04075 PF00107 Zinc-binding dehydrogenase RD1_RS04075 PF08240 Alcohol dehydrogenase GroES-like domain RD1_RS04080 PF00756 Putative esterase RD1_RS04085 PF00034 Cytochrome c RD1_RS04090 PF01011 PQQ enzyme repeat RD1_RS04090 PF13360 PQQ-like domain RD1_RS04095 PF13442 Cytochrome C oxidase, cbb3-type, subunit III RD1_RS04100 PF00497 Bacterial extracellular solute-binding proteins, family 3 RD1_RS04110 PF08770 Sulphur oxidation protein SoxZ RD1_RS04110 PF13501 Sulfur oxidation protein SoxY RD1_RS04115 PF02239 Cytochrome D1 heme domain RD1_RS04120 PF10604 Polyketide cyclase / dehydrase and lipid transport RD1_RS04125 PF11684 RD1_RS04125 RD1_RS04130 PF13458 Periplasmic binding protein RD1_RS04135 PF10282 Lactonase, 7-bladed beta-propeller RD1_RS04145 PF13670 RD1_RS04145 RD1_RS04150 PF09084 NMT1/THI5 like RD1_RS04155 PF00528 Binding-protein-dependent transport system inner membrane component RD1_RS04160 PF00005 ABC transporter RD1_RS04165 PF07433 RD1_RS04165 RD1_RS04170 PF09375 Imelysin RD1_RS04175 PF06537 RD1_RS04175 RD1_RS04185 PF00210 Ferritin-like domain RD1_RS04190 PF06945 RD1_RS04190 RD1_RS04205 PF10636 Hemin uptake protein hemP RD1_RS04210 PF00528 Binding-protein-dependent transport system inner membrane component RD1_RS04215 PF13343 Bacterial extracellular solute-binding protein RD1_RS04220 PF03773 RD1_RS04220 RD1_RS04225 PF00376 MerR family regulatory protein RD1_RS04225 PF09278 MerR, DNA binding RD1_RS04230 PF00950 RD1_RS04230 RD1_RS04235 PF00950 RD1_RS04235 RD1_RS04240 PF00005 ABC transporter RD1_RS04245 PF01297 Periplasmic solute binding protein family RD1_RS04250 PF00909 Ammonium Transporter Family RD1_RS04255 PF00392 Bacterial regulatory proteins, gntR family RD1_RS04255 PF07729 FCD domain RD1_RS04260 PF00171 Aldehyde dehydrogenase family RD1_RS04265 PF07859 alpha/beta hydrolase fold RD1_RS04270 PF00557 Metallopeptidase family M24 RD1_RS04270 PF01321 Creatinase/Prolidase N-terminal domain RD1_RS04280 PF07509 RD1_RS04280 RD1_RS04285 PF01230 HIT domain RD1_RS04290 PF01668 SmpB protein RD1_RS04295 PF00581 Rhodanese-like domain RD1_RS04300 PF00155 Aminotransferase class I and II RD1_RS04305 PF00909 Ammonium Transporter Family RD1_RS04310 PF00543 Nitrogen regulatory protein P-II RD1_RS04315 PF00905 Penicillin binding protein transpeptidase domain RD1_RS04315 PF00912 Transglycosylase RD1_RS04320 PF05494 Toluene tolerance, Ttg2 RD1_RS04325 PF04333 RD1_RS04325 RD1_RS04330 PF14588 YjgF/chorismate_mutase-like, putative endoribonuclease RD1_RS04335 PF03009 Glycerophosphoryl diester phosphodiesterase family RD1_RS04340 PF04339 RD1_RS04340 RD1_RS04345 PF01329 Pterin 4 alpha carbinolamine dehydratase RD1_RS04350 PF00924 Mechanosensitive ion channel RD1_RS04355 PF08534 Redoxin RD1_RS04360 PF07992 Pyridine nucleotide-disulphide oxidoreductase RD1_RS04360 PF14759 Reductase C-terminal RD1_RS04365 PF03602 Conserved hypothetical protein 95 RD1_RS04375 PF00557 Metallopeptidase family M24 RD1_RS04380 PF03749 Sugar fermentation stimulation protein RD1_RS04385 PF00994 Probable molybdopterin binding domain RD1_RS04390 PF00583 Acetyltransferase (GNAT) family RD1_RS04395 PF02627 Carboxymuconolactone decarboxylase family RD1_RS04400 PF00691 OmpA family RD1_RS04405 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RD1_RS04405 PF03466 LysR substrate binding domain RD1_RS04415 PF14347 RD1_RS04415 RD1_RS04420 PF00724 NADH:flavin oxidoreductase / NADH oxidase family RD1_RS04420 PF07992 Pyridine nucleotide-disulphide oxidoreductase RD1_RS04430 PF00293 NUDIX domain RD1_RS04440 PF00294 pfkB family carbohydrate kinase RD1_RS04445 PF00633 Helix-hairpin-helix motif RD1_RS04445 PF00730 HhH-GPD superfamily base excision DNA repair protein RD1_RS04445 PF10576 Iron-sulfur binding domain of endonuclease III RD1_RS04450 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain RD1_RS04450 PF12833 Helix-turn-helix domain RD1_RS04455 PF00691 OmpA family RD1_RS04455 PF13488 RD1_RS04455 RD1_RS04460 PF03358 NADPH-dependent FMN reductase RD1_RS04465 PF01266 FAD dependent oxidoreductase RD1_RS04470 PF05430 S-adenosyl-L-methionine-dependent methyltransferase RD1_RS04475 PF01464 Transglycosylase SLT domain RD1_RS04480 PF00701 Dihydrodipicolinate synthetase family RD1_RS04485 PF04976 RD1_RS04485 RD1_RS04490 PF12800 4Fe-4S binding domain RD1_RS04490 PF13247 4Fe-4S dicluster domain RD1_RS04495 PF00384 Molybdopterin oxidoreductase RD1_RS04495 PF01568 Molydopterin dinucleotide binding domain RD1_RS04495 PF04879 Molybdopterin oxidoreductase Fe4S4 domain RD1_RS04505 PF00205 Thiamine pyrophosphate enzyme, central domain RD1_RS04505 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain RD1_RS04505 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain RD1_RS04510 PF00155 Aminotransferase class I and II RD1_RS04510 PF00392 Bacterial regulatory proteins, gntR family RD1_RS04515 PF03976 Polyphosphate kinase 2 (PPK2) RD1_RS04520 PF04325 Protein of unknown function (DUF465) RD1_RS04525 PF00202 Aminotransferase class-III RD1_RS04530 PF09084 NMT1/THI5 like RD1_RS04535 PF00005 ABC transporter RD1_RS04540 PF00528 Binding-protein-dependent transport system inner membrane component RD1_RS04545 PF00487 RD1_RS04545 RD1_RS04550 PF00270 DEAD/DEAH box helicase RD1_RS04550 PF00271 Helicase conserved C-terminal domain RD1_RS04550 PF03880 DbpA RNA binding domain RD1_RS04555 PF01063 Aminotransferase class IV RD1_RS04560 PF00034 Cytochrome c RD1_RS04560 PF00400 WD domain, G-beta repeat RD1_RS04565 PF12840 Helix-turn-helix domain RD1_RS04570 PF00724 NADH:flavin oxidoreductase / NADH oxidase family RD1_RS04580 PF09538 RD1_RS04580 RD1_RS04585 PF01863 Protein of unknown function DUF45 RD1_RS04590 PF00392 Bacterial regulatory proteins, gntR family RD1_RS04590 PF07729 FCD domain RD1_RS04595 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit RD1_RS04600 PF01810 RD1_RS04600 RD1_RS04605 PF01037 AsnC family RD1_RS04605 PF13412 Winged helix-turn-helix DNA-binding RD1_RS04610 PF03328 HpcH/HpaI aldolase/citrate lyase family RD1_RS04615 PF07755 Protein of unknown function (DUF1611) RD1_RS04620 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain RD1_RS04620 PF13378 Enolase C-terminal domain-like RD1_RS04625 PF01063 Aminotransferase class IV RD1_RS04630 PF01575 MaoC like domain RD1_RS04635 PF06844 Protein of unknown function (DUF1244) RD1_RS04640 PF00224 Pyruvate kinase, barrel domain RD1_RS04640 PF02887 Pyruvate kinase, alpha/beta domain RD1_RS04650 PF01632 Ribosomal protein L35 RD1_RS04655 PF00453 Ribosomal protein L20 RD1_RS04660 PF10707 RD1_RS04660 RD1_RS04665 PF01409 tRNA synthetases class II core domain (F) RD1_RS04665 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain RD1_RS04675 PF01588 Putative tRNA binding domain RD1_RS04675 PF03147 Ferredoxin-fold anticodon binding domain RD1_RS04675 PF03483 B3/4 domain RD1_RS04675 PF03484 tRNA synthetase B5 domain RD1_RS04680 PF11071 RD1_RS04680 RD1_RS04685 PF01741 Large-conductance mechanosensitive channel, MscL RD1_RS04690 PF01471 Putative peptidoglycan binding domain RD1_RS04695 PF13365 Trypsin-like peptidase domain RD1_RS04705 PF07520 RD1_RS04705 RD1_RS04710 PF10139 RD1_RS04710 RD1_RS04725 PF00005 ABC transporter RD1_RS04735 PF03781 Sulfatase-modifying factor enzyme 1 RD1_RS04755 PF00355 Rieske [2Fe-2S] domain RD1_RS04755 PF00848 Ring hydroxylating alpha subunit (catalytic domain) RD1_RS04765 PF01262 Alanine dehydrogenase/PNT, C-terminal domain RD1_RS04765 PF05222 Alanine dehydrogenase/PNT, N-terminal domain RD1_RS04770 PF01037 AsnC family RD1_RS04770 PF13412 Winged helix-turn-helix DNA-binding RD1_RS04775 PF03358 NADPH-dependent FMN reductase RD1_RS04780 PF01165 Ribosomal protein S21 RD1_RS04785 PF08511 COQ9 RD1_RS04790 PF00107 Zinc-binding dehydrogenase RD1_RS04790 PF08240 Alcohol dehydrogenase GroES-like domain RD1_RS04795 PF00107 Zinc-binding dehydrogenase RD1_RS04795 PF08240 Alcohol dehydrogenase GroES-like domain RD1_RS04800 PF00445 Ribonuclease T2 family RD1_RS04805 PF06242 RD1_RS04805 RD1_RS04810 PF01042 Endoribonuclease L-PSP RD1_RS04815 PF02132 RecR protein RD1_RS04815 PF13662 Toprim domain RD1_RS04820 PF02575 YbaB/EbfC DNA-binding family RD1_RS04825 PF12169 DNA polymerase III subunits gamma and tau domain III RD1_RS04825 PF12362 RD1_RS04825 RD1_RS04825 PF13177 DNA polymerase III, delta subunit RD1_RS04830 PF00107 Zinc-binding dehydrogenase RD1_RS04830 PF08240 Alcohol dehydrogenase GroES-like domain RD1_RS04835 PF06808 RD1_RS04835 RD1_RS04840 PF04290 RD1_RS04840 RD1_RS04845 PF03480 Bacterial extracellular solute-binding protein, family 7 RD1_RS04850 PF00392 Bacterial regulatory proteins, gntR family RD1_RS04850 PF07729 FCD domain RD1_RS04855 PF00528 Binding-protein-dependent transport system inner membrane component RD1_RS04860 PF00528 Binding-protein-dependent transport system inner membrane component RD1_RS04865 PF00005 ABC transporter RD1_RS04870 PF12974 ABC transporter, phosphonate, periplasmic substrate-binding protein RD1_RS04875 PF13343 Bacterial extracellular solute-binding protein RD1_RS04880 PF00528 Binding-protein-dependent transport system inner membrane component RD1_RS04885 PF00005 ABC transporter RD1_RS04885 PF08402 TOBE domain RD1_RS04890 PF00300 Histidine phosphatase superfamily (branch 1) RD1_RS04905 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) RD1_RS04910 PF11164 RD1_RS04910 RD1_RS04915 PF00815 Histidinol dehydrogenase RD1_RS04920 PF06793 RD1_RS04920 RD1_RS04925 PF01451 Low molecular weight phosphotyrosine protein phosphatase RD1_RS04930 PF03098 Animal haem peroxidase RD1_RS04935 PF12616 RD1_RS04935 RD1_RS04940 PF12680 SnoaL-like domain RD1_RS04965 PF05063 RD1_RS04965 RD1_RS04970 PF09195 Restriction endonuclease BglII RD1_RS04975 PF00009 Elongation factor Tu GTP binding domain RD1_RS04975 PF00679 Elongation factor G C-terminus RD1_RS04975 PF03144 Elongation factor Tu domain 2 RD1_RS04975 PF06421 GTP-binding protein LepA C-terminus RD1_RS04990 PF01258 Prokaryotic dksA/traR C4-type zinc finger RD1_RS05000 PF12692 S-adenosyl-L-methionine methyltransferase RD1_RS05010 PF04101 Glycosyltransferase family 28 C-terminal domain RD1_RS05015 PF00300 Histidine phosphatase superfamily (branch 1) RD1_RS05020 PF00534 Glycosyl transferases group 1 RD1_RS05025 PF00534 Glycosyl transferases group 1 RD1_RS05035 PF00924 Mechanosensitive ion channel RD1_RS05045 PF00528 Binding-protein-dependent transport system inner membrane component RD1_RS05045 PF12911 RD1_RS05045 RD1_RS05050 PF00528 Binding-protein-dependent transport system inner membrane component RD1_RS05055 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle RD1_RS05060 PF00005 ABC transporter RD1_RS05060 PF08352 Oligopeptide/dipeptide transporter, C-terminal region RD1_RS05065 PF12692 S-adenosyl-L-methionine methyltransferase RD1_RS05070 PF00834 Ribulose-phosphate 3 epimerase family RD1_RS05075 PF00501 AMP-binding enzyme RD1_RS05075 PF13193 AMP-binding enzyme C-terminal domain RD1_RS05080 PF01925 RD1_RS05080 RD1_RS05085 PF00107 Zinc-binding dehydrogenase RD1_RS05085 PF08240 Alcohol dehydrogenase GroES-like domain RD1_RS05090 PF13561 Enoyl-(Acyl carrier protein) reductase RD1_RS05095 PF10067 RD1_RS05095 RD1_RS05100 PF00929 Exonuclease RD1_RS05110 PF00027 Cyclic nucleotide-binding domain RD1_RS05110 PF00571 CBS domain RD1_RS05110 PF03445 RD1_RS05110 RD1_RS05110 PF10335 RD1_RS05110 RD1_RS05115 PF00474 Sodium:solute symporter family RD1_RS05120 PF13937 RD1_RS05120 RD1_RS05125 PF00406 Adenylate kinase RD1_RS05125 PF05191 Adenylate kinase, active site lid RD1_RS05130 PF00501 AMP-binding enzyme RD1_RS05130 PF13193 AMP-binding enzyme C-terminal domain RD1_RS05130 PF16177 RD1_RS05130 RD1_RS05135 PF03734 L,D-transpeptidase catalytic domain RD1_RS05140 PF00892 EamA-like transporter family RD1_RS05145 PF01471 Putative peptidoglycan binding domain RD1_RS05145 PF13406 Transglycosylase SLT domain RD1_RS05160 PF13437 HlyD family secretion protein RD1_RS05165 PF00005 ABC transporter RD1_RS05165 PF00664 ABC transporter transmembrane region RD1_RS05170 PF02321 Outer membrane efflux protein RD1_RS05175 PF00691 OmpA family RD1_RS05185 PF07883 Cupin domain RD1_RS05190 PF00132 Bacterial transferase hexapeptide (six repeats) RD1_RS05190 PF06426 Serine acetyltransferase, N-terminal RD1_RS05195 PF00892 EamA-like transporter family RD1_RS05200 PF01361 Tautomerase enzyme RD1_RS05205 PF12893 Putative lumazine-binding RD1_RS05210 PF00043 Glutathione S-transferase, C-terminal domain RD1_RS05210 PF02798 Glutathione S-transferase, N-terminal domain RD1_RS05215 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RD1_RS05215 PF03466 LysR substrate binding domain RD1_RS05220 PF00440 Bacterial regulatory proteins, tetR family RD1_RS05225 PF13460 NADH(P)-binding RD1_RS05235 PF05729 NACHT domain RD1_RS05245 PF01527 Transposase RD1_RS05250 PF13276 RD1_RS05250 RD1_RS05250 PF13683 RD1_RS05250 RD1_RS05260 PF01527 Transposase RD1_RS05265 PF00665 Integrase core domain RD1_RS05285 PF04055 Radical SAM superfamily RD1_RS05285 PF13186 Iron-sulfur cluster-binding domain RD1_RS05285 PF13353 4Fe-4S single cluster domain RD1_RS05290 PF05402 Coenzyme PQQ synthesis protein D (PqqD) RD1_RS05295 PF03070 TENA/THI-4/PQQC family RD1_RS05300 PF12706 Beta-lactamase superfamily domain RD1_RS05305 PF08042 RD1_RS05305 RD1_RS05310 PF00072 Response regulator receiver domain RD1_RS05310 PF00486 Transcriptional regulatory protein, C terminal RD1_RS05315 PF00512 His Kinase A (phospho-acceptor) domain RD1_RS05315 PF00672 HAMP domain RD1_RS05315 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RD1_RS05325 PF01061 RD1_RS05325 RD1_RS05330 PF00005 ABC transporter RD1_RS05335 PF03328 HpcH/HpaI aldolase/citrate lyase family RD1_RS05340 PF00266 Aminotransferase class-V RD1_RS05345 PF00549 CoA-ligase RD1_RS05345 PF08442 ATP-grasp domain RD1_RS05350 PF00549 CoA-ligase RD1_RS05350 PF02629 CoA binding domain RD1_RS05355 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain RD1_RS05355 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain RD1_RS05360 PF00464 Serine hydroxymethyltransferase RD1_RS05365 PF00226 DnaJ domain RD1_RS05375 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain RD1_RS05375 PF00672 HAMP domain RD1_RS05380 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RD1_RS05380 PF03466 LysR substrate binding domain RD1_RS05390 PF00353 Hemolysin-type calcium-binding repeat (2 copies) RD1_RS05410 PF00355 Rieske [2Fe-2S] domain RD1_RS05410 PF01794 RD1_RS05410 RD1_RS05420 PF00152 tRNA synthetases class II (D, K and N) RD1_RS05420 PF01336 OB-fold nucleic acid binding domain RD1_RS05420 PF02938 GAD domain RD1_RS05425 PF13302 Acetyltransferase (GNAT) domain RD1_RS05430 PF00072 Response regulator receiver domain RD1_RS05435 PF13669 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily RD1_RS05440 PF07330 RD1_RS05440 RD1_RS05445 PF07264 Etoposide-induced protein 2 RD1_RS05450 PF00881 Nitroreductase family RD1_RS05455 PF00850 Histone deacetylase domain RD1_RS05460 PF00579 tRNA synthetases class I (W and Y) RD1_RS05465 PF01694 Rhomboid family RD1_RS05470 PF03023 RD1_RS05470 RD1_RS05475 PF01966 HD domain RD1_RS05475 PF03710 Glutamate-ammonia ligase adenylyltransferase RD1_RS05475 PF08335 GlnD PII-uridylyltransferase RD1_RS05480 PF13458 Periplasmic binding protein RD1_RS05485 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases RD1_RS05490 PF02021 Uncharacterised protein family UPF0102 RD1_RS05495 PF02951 Prokaryotic glutathione synthetase, N-terminal domain RD1_RS05495 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain RD1_RS05500 PF01078 Magnesium chelatase, subunit ChlI RD1_RS05500 PF13335 RD1_RS05500 RD1_RS05500 PF13541 Subunit ChlI of Mg-chelatase RD1_RS05505 PF13409 Glutathione S-transferase, N-terminal domain RD1_RS05510 PF00300 Histidine phosphatase superfamily (branch 1) RD1_RS05515 PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase RD1_RS05520 PF04542 Sigma-70 region 2 RD1_RS05520 PF04545 Sigma-70, region 4 RD1_RS05525 PF04187 Protein of unknown function, DUF399 RD1_RS05530 PF02441 Flavoprotein RD1_RS05530 PF04127 DNA / pantothenate metabolism flavoprotein RD1_RS05535 PF00692 dUTPase RD1_RS05540 PF00899 ThiF family RD1_RS05545 PF01432 Peptidase family M3 RD1_RS05550 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain RD1_RS05555 PF01098 RD1_RS05555 RD1_RS05560 PF00905 Penicillin binding protein transpeptidase domain RD1_RS05560 PF03717 Penicillin-binding Protein dimerisation domain RD1_RS05570 PF04085 rod shape-determining protein MreC RD1_RS05575 PF06723 MreB/Mbl protein RD1_RS05580 PF00497 Bacterial extracellular solute-binding proteins, family 3 RD1_RS05585 PF00682 HMGL-like RD1_RS05585 PF08502 LeuA allosteric (dimerisation) domain RD1_RS05590 PF13561 Enoyl-(Acyl carrier protein) reductase RD1_RS05595 PF04244 Deoxyribodipyrimidine photo-lyase-related protein RD1_RS05600 PF02493 MORN repeat RD1_RS05605 PF00795 Carbon-nitrogen hydrolase RD1_RS05605 PF02540 NAD synthase RD1_RS05610 PF02230 Phospholipase/Carboxylesterase RD1_RS05615 PF00753 Metallo-beta-lactamase superfamily RD1_RS05620 PF00749 tRNA synthetases class I (E and Q), catalytic domain RD1_RS05625 PF01554 MatE RD1_RS05630 PF06094 AIG2-like family RD1_RS05635 PF01571 Aminomethyltransferase folate-binding domain RD1_RS05635 PF08669 Glycine cleavage T-protein C-terminal barrel domain RD1_RS05640 PF01597 Glycine cleavage H-protein RD1_RS05645 PF02347 Glycine cleavage system P-protein RD1_RS05650 PF02687 RD1_RS05650 RD1_RS05655 PF00005 ABC transporter RD1_RS05660 PF13472 GDSL-like Lipase/Acylhydrolase family RD1_RS05665 PF00313 'Cold-shock' DNA-binding domain RD1_RS05680 PF00313 'Cold-shock' DNA-binding domain RD1_RS05685 PF08212 Lipocalin-like domain RD1_RS05690 PF14384 RD1_RS05690 RD1_RS05695 PF11158 RD1_RS05695 RD1_RS05705 PF00005 ABC transporter RD1_RS05705 PF12848 ABC transporter RD1_RS05715 PF05990 Alpha/beta hydrolase of unknown function (DUF900) RD1_RS05720 PF03473 MOSC domain RD1_RS05725 PF01467 Cytidylyltransferase RD1_RS05730 PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family RD1_RS05740 PF01921 tRNA synthetases class I (K) RD1_RS05745 PF16156 RD1_RS05745 RD1_RS05770 PF13883 Pyridoxamine 5'-phosphate oxidase RD1_RS05775 PF00892 EamA-like transporter family RD1_RS05785 PF00271 Helicase conserved C-terminal domain RD1_RS05785 PF02151 UvrB/uvrC motif RD1_RS05785 PF04851 Type III restriction enzyme, res subunit RD1_RS05785 PF12344 Ultra-violet resistance protein B RD1_RS05790 PF04800 ETC complex I subunit conserved region RD1_RS05800 PF00149 Calcineurin-like phosphoesterase RD1_RS05800 PF02872 5'-nucleotidase, C-terminal domain RD1_RS05805 PF00293 NUDIX domain RD1_RS05805 PF09296 NADH pyrophosphatase-like rudimentary NUDIX domain RD1_RS05805 PF09297 NADH pyrophosphatase zinc ribbon domain RD1_RS05810 PF10604 Polyketide cyclase / dehydrase and lipid transport RD1_RS05815 PF00800 Prephenate dehydratase RD1_RS05820 PF00034 Cytochrome c RD1_RS05825 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle RD1_RS05830 PF00528 Binding-protein-dependent transport system inner membrane component RD1_RS05835 PF00528 Binding-protein-dependent transport system inner membrane component RD1_RS05835 PF12911 RD1_RS05835 RD1_RS05840 PF00005 ABC transporter RD1_RS05840 PF08352 Oligopeptide/dipeptide transporter, C-terminal region RD1_RS05845 PF04055 Radical SAM superfamily RD1_RS05850 PF00027 Cyclic nucleotide-binding domain RD1_RS05850 PF13545 Crp-like helix-turn-helix domain RD1_RS05855 PF00582 Universal stress protein family RD1_RS05860 PF00115 Cytochrome C and Quinol oxidase polypeptide I RD1_RS05865 PF02433 Cytochrome C oxidase, mono-heme subunit/FixO RD1_RS05870 PF05545 RD1_RS05870 RD1_RS05875 PF13442 Cytochrome C oxidase, cbb3-type, subunit III RD1_RS05875 PF14715 N-terminal domain of cytochrome oxidase-cbb3, FixP RD1_RS05880 PF11614 IG-like fold at C-terminal of FixG, putative oxidoreductase RD1_RS05880 PF12801 RD1_RS05880 RD1_RS05880 PF13746 4Fe-4S dicluster domain RD1_RS05885 PF05751 RD1_RS05885 RD1_RS05890 PF00122 E1-E2 ATPase RD1_RS05890 PF00403 Heavy-metal-associated domain RD1_RS05890 PF00702 haloacid dehalogenase-like hydrolase RD1_RS05895 PF03597 RD1_RS05895 RD1_RS05900 PF00768 D-alanyl-D-alanine carboxypeptidase RD1_RS05905 PF02617 ATP-dependent Clp protease adaptor protein ClpS RD1_RS05910 PF05175 Methyltransferase small domain RD1_RS05915 PF13561 Enoyl-(Acyl carrier protein) reductase RD1_RS05920 PF01218 Coproporphyrinogen III oxidase RD1_RS05925 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain RD1_RS05925 PF03900 Porphobilinogen deaminase, C-terminal domain RD1_RS05930 PF01208 Uroporphyrinogen decarboxylase (URO-D) RD1_RS05940 PF03480 Bacterial extracellular solute-binding protein, family 7 RD1_RS05945 PF04290 RD1_RS05945 RD1_RS05950 PF06808 RD1_RS05950 RD1_RS05955 PF03745 Domain of unknown function (DUF309) RD1_RS05960 PF09933 RD1_RS05960 RD1_RS05965 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle RD1_RS05975 PF01565 FAD binding domain RD1_RS05980 PF07969 Amidohydrolase family RD1_RS05985 PF01042 Endoribonuclease L-PSP RD1_RS05995 PF00892 EamA-like transporter family RD1_RS06000 PF09140 ATPase MipZ RD1_RS06020 PF01400 Astacin (Peptidase family M12A) RD1_RS06025 PF01197 Ribosomal protein L31 RD1_RS06030 PF01245 Ribosomal protein L19 RD1_RS06040 PF01746 tRNA (Guanine-1)-methyltransferase RD1_RS06045 PF01782 RimM N-terminal domain RD1_RS06045 PF05239 PRC-barrel domain RD1_RS06050 PF00886 Ribosomal protein S16 RD1_RS06055 PF01817 Chorismate mutase type II RD1_RS06060 PF13302 Acetyltransferase (GNAT) domain RD1_RS06065 PF13302 Acetyltransferase (GNAT) domain RD1_RS06070 PF00448 SRP54-type protein, GTPase domain RD1_RS06070 PF02881 SRP54-type protein, helical bundle domain RD1_RS06070 PF02978 Signal peptide binding domain RD1_RS06080 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RD1_RS06080 PF03466 LysR substrate binding domain RD1_RS06085 PF00892 EamA-like transporter family RD1_RS06090 PF12840 Helix-turn-helix domain RD1_RS06095 PF09527 RD1_RS06095 RD1_RS06100 PF00119 ATP synthase A chain RD1_RS06105 PF00137 ATP synthase subunit C RD1_RS06110 PF00430 ATP synthase B/B' CF(0) RD1_RS06115 PF00430 ATP synthase B/B' CF(0) RD1_RS06120 PF00392 Bacterial regulatory proteins, gntR family RD1_RS06120 PF07729 FCD domain RD1_RS06125 PF02463 RecF/RecN/SMC N terminal domain RD1_RS06135 PF01471 Putative peptidoglycan binding domain RD1_RS06135 PF13406 Transglycosylase SLT domain RD1_RS06140 PF03186 RD1_RS06140 RD1_RS06145 PF00155 Aminotransferase class I and II RD1_RS06150 PF00072 Response regulator receiver domain RD1_RS06155 PF13409 Glutathione S-transferase, N-terminal domain RD1_RS06155 PF13410 Glutathione S-transferase, C-terminal domain RD1_RS06165 PF00155 Aminotransferase class I and II RD1_RS06170 PF01327 Polypeptide deformylase RD1_RS06175 PF01327 Polypeptide deformylase RD1_RS06180 PF00551 Formyl transferase RD1_RS06180 PF02911 Formyl transferase, C-terminal domain RD1_RS06190 PF00873 AcrB/AcrD/AcrF family RD1_RS06195 PF16576 RD1_RS06195 RD1_RS06200 PF00440 Bacterial regulatory proteins, tetR family RD1_RS06205 PF06253 Trimethylamine methyltransferase (MTTB) RD1_RS06210 PF01266 FAD dependent oxidoreductase RD1_RS06210 PF01571 Aminomethyltransferase folate-binding domain RD1_RS06210 PF08669 Glycine cleavage T-protein C-terminal barrel domain RD1_RS06210 PF16350 RD1_RS06210 RD1_RS06220 PF00657 GDSL-like Lipase/Acylhydrolase RD1_RS06225 PF01557 Fumarylacetoacetate (FAA) hydrolase family RD1_RS06230 PF07007 Protein of unknown function (DUF1311) RD1_RS06230 PF09864 Membrane-bound lysozyme-inhibitor of c-type lysozyme RD1_RS06235 PF03458 RD1_RS06235 RD1_RS06240 PF00075 RNase H RD1_RS06245 PF13649 Methyltransferase domain RD1_RS06250 PF11911 RD1_RS06250 RD1_RS06260 PF02401 LytB protein RD1_RS06265 PF01936 NYN domain RD1_RS06270 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) RD1_RS06275 PF01192 RNA polymerase Rpb6 RD1_RS06280 PF02824 TGS domain RD1_RS06280 PF04607 Region found in RelA / SpoT proteins RD1_RS06280 PF13291 ACT domain RD1_RS06280 PF13328 HD domain RD1_RS06285 PF09835 RD1_RS06285 RD1_RS06290 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ RD1_RS06295 PF01810 RD1_RS06295 RD1_RS06300 PF01648 4'-phosphopantetheinyl transferase superfamily RD1_RS06305 PF00717 Peptidase S24-like RD1_RS06310 PF00035 Double-stranded RNA binding motif RD1_RS06310 PF14622 Ribonuclease-III-like RD1_RS06315 PF01926 50S ribosome-binding GTPase RD1_RS06315 PF07650 KH domain RD1_RS06320 PF07372 Protein of unknown function (DUF1491) RD1_RS06325 PF02565 Recombination protein O C terminal RD1_RS06325 PF11967 Recombination protein O N terminal RD1_RS06330 PF03724 META domain RD1_RS06335 PF00440 Bacterial regulatory proteins, tetR family RD1_RS06340 PF00441 Acyl-CoA dehydrogenase, C-terminal domain RD1_RS06340 PF02770 Acyl-CoA dehydrogenase, middle domain RD1_RS06340 PF02771 Acyl-CoA dehydrogenase, N-terminal domain RD1_RS06345 PF12844 Helix-turn-helix domain RD1_RS06350 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RD1_RS06360 PF01293 Phosphoenolpyruvate carboxykinase RD1_RS06365 PF00072 Response regulator receiver domain RD1_RS06365 PF00486 Transcriptional regulatory protein, C terminal RD1_RS06370 PF00512 His Kinase A (phospho-acceptor) domain RD1_RS06370 PF00672 HAMP domain RD1_RS06370 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RD1_RS06370 PF13755 RD1_RS06370 RD1_RS06375 PF07475 HPr Serine kinase C-terminal domain RD1_RS06380 PF03668 RD1_RS06380 RD1_RS06385 PF03610 PTS system fructose IIA component RD1_RS06390 PF00381 PTS HPr component phosphorylation site RD1_RS06395 PF01553 Acyltransferase RD1_RS06400 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain RD1_RS06400 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain RD1_RS06410 PF00766 Electron transfer flavoprotein FAD-binding domain RD1_RS06410 PF01012 Electron transfer flavoprotein domain RD1_RS06415 PF01012 Electron transfer flavoprotein domain RD1_RS06420 PF01923 Cobalamin adenosyltransferase RD1_RS06425 PF04588 Hypoxia induced protein conserved region RD1_RS06430 PF00106 short chain dehydrogenase RD1_RS06435 PF08239 Bacterial SH3 domain RD1_RS06440 PF00521 DNA gyrase/topoisomerase IV, subunit A RD1_RS06440 PF03989 DNA gyrase C-terminal domain, beta-propeller RD1_RS06445 PF00067 Cytochrome P450 RD1_RS06455 PF00009 Elongation factor Tu GTP binding domain RD1_RS06455 PF03143 Elongation factor Tu C-terminal domain RD1_RS06455 PF03144 Elongation factor Tu domain 2 RD1_RS06460 PF01965 DJ-1/PfpI family RD1_RS06470 PF00338 Ribosomal protein S10p/S20e RD1_RS06475 PF00297 Ribosomal protein L3 RD1_RS06480 PF00573 Ribosomal protein L4/L1 family RD1_RS06485 PF00276 Ribosomal protein L23 RD1_RS06490 PF00313 'Cold-shock' DNA-binding domain RD1_RS06505 PF00181 Ribosomal Proteins L2, RNA binding domain RD1_RS06505 PF03947 Ribosomal Proteins L2, C-terminal domain RD1_RS06510 PF00203 Ribosomal protein S19 RD1_RS06515 PF00237 Ribosomal protein L22p/L17e RD1_RS06520 PF00189 Ribosomal protein S3, C-terminal domain RD1_RS06520 PF07650 KH domain RD1_RS06525 PF00252 Ribosomal protein L16p/L10e RD1_RS06535 PF13759 Putative 2OG-Fe(II) oxygenase RD1_RS06545 PF02423 Ornithine cyclodeaminase/mu-crystallin family RD1_RS06550 PF00491 Arginase family RD1_RS06555 PF01810 RD1_RS06555 RD1_RS06560 PF00831 Ribosomal L29 protein RD1_RS06565 PF00366 Ribosomal protein S17 RD1_RS06570 PF00238 Ribosomal protein L14p/L23e RD1_RS06575 PF00467 KOW motif RD1_RS06575 PF17136 RD1_RS06575 RD1_RS06580 PF00281 Ribosomal protein L5 RD1_RS06580 PF00673 ribosomal L5P family C-terminus RD1_RS06585 PF00253 Ribosomal protein S14p/S29e RD1_RS06590 PF00410 Ribosomal protein S8 RD1_RS06595 PF00347 Ribosomal protein L6 RD1_RS06600 PF00861 Ribosomal L18p/L5e family RD1_RS06605 PF00333 Ribosomal protein S5, N-terminal domain RD1_RS06605 PF03719 Ribosomal protein S5, C-terminal domain RD1_RS06610 PF00327 Ribosomal protein L30p/L7e RD1_RS06625 PF00828 Ribosomal protein L18e/L15 RD1_RS06630 PF00344 SecY translocase RD1_RS06635 PF00406 Adenylate kinase RD1_RS06635 PF05191 Adenylate kinase, active site lid RD1_RS06645 PF00416 Ribosomal protein S13/S18 RD1_RS06650 PF00411 Ribosomal protein S11 RD1_RS06655 PF01000 RNA polymerase Rpb3/RpoA insert domain RD1_RS06655 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain RD1_RS06655 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain RD1_RS06660 PF01196 Ribosomal protein L17 RD1_RS06665 PF05496 Holliday junction DNA helicase ruvB N-terminus RD1_RS06665 PF12002 MgsA AAA+ ATPase C terminal RD1_RS06665 PF16193 RD1_RS06665 RD1_RS06670 PF02537 RD1_RS06670 RD1_RS06675 PF00849 RNA pseudouridylate synthase RD1_RS06675 PF01479 S4 domain RD1_RS06680 PF13419 Haloacid dehalogenase-like hydrolase RD1_RS06685 PF07542 ATP12 chaperone protein RD1_RS06690 PF00497 Bacterial extracellular solute-binding proteins, family 3 RD1_RS06695 PF00528 Binding-protein-dependent transport system inner membrane component RD1_RS06700 PF00528 Binding-protein-dependent transport system inner membrane component RD1_RS06705 PF00005 ABC transporter RD1_RS06710 PF00300 Histidine phosphatase superfamily (branch 1) RD1_RS06720 PF04116 RD1_RS06720 RD1_RS06725 PF00696 Amino acid kinase family RD1_RS06730 PF01926 50S ribosome-binding GTPase RD1_RS06735 PF03473 MOSC domain RD1_RS06735 PF03476 MOSC N-terminal beta barrel domain RD1_RS06740 PF02096 60Kd inner membrane protein RD1_RS06740 PF14849 YidC periplasmic domain RD1_RS06745 PF00563 EAL domain RD1_RS06745 PF00990 GGDEF domain RD1_RS06750 PF01171 PP-loop family RD1_RS06755 PF01809 RD1_RS06755 RD1_RS06760 PF00825 Ribonuclease P RD1_RS06765 PF00468 Ribosomal protein L34 RD1_RS06770 PF09335 RD1_RS06770 RD1_RS06775 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain RD1_RS06775 PF07992 Pyridine nucleotide-disulphide oxidoreductase RD1_RS06780 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RD1_RS06815 PF02274 Amidinotransferase RD1_RS06820 PF00501 AMP-binding enzyme RD1_RS06820 PF13193 AMP-binding enzyme C-terminal domain RD1_RS06825 PF05292 Malonyl-CoA decarboxylase (MCD) RD1_RS06830 PF06808 RD1_RS06830 RD1_RS06835 PF04290 RD1_RS06835 RD1_RS06840 PF03480 Bacterial extracellular solute-binding protein, family 7 RD1_RS06845 PF00392 Bacterial regulatory proteins, gntR family RD1_RS06845 PF07729 FCD domain RD1_RS06850 PF11154 RD1_RS06850 RD1_RS06855 PF01232 Mannitol dehydrogenase Rossmann domain RD1_RS06855 PF08125 Mannitol dehydrogenase C-terminal domain RD1_RS06860 PF00005 ABC transporter RD1_RS06860 PF03459 TOBE domain RD1_RS06865 PF00528 Binding-protein-dependent transport system inner membrane component RD1_RS06870 PF00528 Binding-protein-dependent transport system inner membrane component RD1_RS06875 PF01547 Bacterial extracellular solute-binding protein RD1_RS06880 PF00356 Bacterial regulatory proteins, lacI family RD1_RS06880 PF13377 Periplasmic binding protein-like domain RD1_RS06885 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RD1_RS06890 PF13416 Bacterial extracellular solute-binding protein RD1_RS06900 PF00072 Response regulator receiver domain RD1_RS06905 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain RD1_RS06905 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain RD1_RS06905 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain RD1_RS06910 PF03069 Acetamidase/Formamidase family RD1_RS06915 PF01593 Flavin containing amine oxidoreductase RD1_RS06920 PF00795 Carbon-nitrogen hydrolase RD1_RS06925 PF00120 Glutamine synthetase, catalytic domain RD1_RS06925 PF16952 RD1_RS06925 RD1_RS06930 PF01380 SIS domain RD1_RS06930 PF01418 Helix-turn-helix domain, rpiR family RD1_RS06935 PF05013 N-formylglutamate amidohydrolase RD1_RS06940 PF00857 Isochorismatase family RD1_RS06945 PF00005 ABC transporter RD1_RS06945 PF12399 Branched-chain amino acid ATP-binding cassette transporter RD1_RS06950 PF13458 Periplasmic binding protein RD1_RS06955 PF00005 ABC transporter RD1_RS06960 PF02653 RD1_RS06960 RD1_RS06965 PF02653 RD1_RS06965 RD1_RS06970 PF04143 RD1_RS06970 RD1_RS06975 PF01022 Bacterial regulatory protein, arsR family RD1_RS06985 PF02683 RD1_RS06985 RD1_RS06990 PF13098 Thioredoxin-like domain RD1_RS06995 PF00034 Cytochrome c RD1_RS07000 PF13501 Sulfur oxidation protein SoxY RD1_RS07005 PF08770 Sulphur oxidation protein SoxZ RD1_RS07015 PF02872 5'-nucleotidase, C-terminal domain RD1_RS07020 PF00174 Oxidoreductase molybdopterin binding domain RD1_RS07020 PF03404 Mo-co oxidoreductase dimerisation domain RD1_RS07025 PF00034 Cytochrome c RD1_RS07025 PF13442 Cytochrome C oxidase, cbb3-type, subunit III RD1_RS07030 PF00034 Cytochrome c RD1_RS07030 PF13442 Cytochrome C oxidase, cbb3-type, subunit III RD1_RS07035 PF07992 Pyridine nucleotide-disulphide oxidoreductase RD1_RS07035 PF09242 Flavocytochrome c sulphide dehydrogenase, flavin-binding RD1_RS07040 PF03625 Domain of unknown function DUF302 RD1_RS07045 PF04143 RD1_RS07045 RD1_RS07050 PF00753 Metallo-beta-lactamase superfamily RD1_RS07055 PF00753 Metallo-beta-lactamase superfamily RD1_RS07060 PF16868 RD1_RS07060 RD1_RS07065 PF06808 RD1_RS07065 RD1_RS07070 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain RD1_RS07070 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain RD1_RS07075 PF00591 Glycosyl transferase family, a/b domain RD1_RS07075 PF00625 Guanylate kinase RD1_RS07075 PF02885 Glycosyl transferase family, helical bundle domain RD1_RS07075 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain RD1_RS07080 PF01979 Amidohydrolase family RD1_RS07085 PF01047 MarR family RD1_RS07090 PF00941 FAD binding domain in molybdopterin dehydrogenase RD1_RS07090 PF03450 CO dehydrogenase flavoprotein C-terminal domain RD1_RS07095 PF00111 2Fe-2S iron-sulfur cluster binding domain RD1_RS07095 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain RD1_RS07095 PF01799 [2Fe-2S] binding domain RD1_RS07095 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase RD1_RS07110 PF06684 Amino acid synthesis RD1_RS07115 PF06684 Amino acid synthesis RD1_RS07120 PF03480 Bacterial extracellular solute-binding protein, family 7 RD1_RS07125 PF04290 RD1_RS07125 RD1_RS07130 PF06808 RD1_RS07130 RD1_RS07135 PF00353 Hemolysin-type calcium-binding repeat (2 copies) RD1_RS07140 PF12801 RD1_RS07140 RD1_RS07150 PF05048 Periplasmic copper-binding protein (NosD) RD1_RS07155 PF00005 ABC transporter RD1_RS07160 PF12679 RD1_RS07160 RD1_RS07165 PF05573 NosL RD1_RS07170 PF02424 ApbE family RD1_RS07175 PF00027 Cyclic nucleotide-binding domain RD1_RS07175 PF13545 Crp-like helix-turn-helix domain RD1_RS07180 PF00027 Cyclic nucleotide-binding domain RD1_RS07180 PF13545 Crp-like helix-turn-helix domain RD1_RS07185 PF13875 RD1_RS07185 RD1_RS07190 PF03626 RD1_RS07190 RD1_RS07195 PF00510 Cytochrome c oxidase subunit III RD1_RS07205 PF07728 AAA domain (dynein-related subfamily) RD1_RS07205 PF08406 RD1_RS07205 RD1_RS07210 PF00115 Cytochrome C and Quinol oxidase polypeptide I RD1_RS07215 PF00034 Cytochrome c RD1_RS07220 PF00034 Cytochrome c RD1_RS07225 PF04205 FMN-binding domain RD1_RS07225 PF12801 RD1_RS07225 RD1_RS07230 PF02239 Cytochrome D1 heme domain RD1_RS07230 PF13442 Cytochrome C oxidase, cbb3-type, subunit III RD1_RS07235 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases RD1_RS07240 PF13442 Cytochrome C oxidase, cbb3-type, subunit III RD1_RS07245 PF02239 Cytochrome D1 heme domain RD1_RS07255 PF13404 AsnC-type helix-turn-helix domain RD1_RS07265 PF04055 Radical SAM superfamily RD1_RS07265 PF13353 4Fe-4S single cluster domain RD1_RS07270 PF02239 Cytochrome D1 heme domain RD1_RS07270 PF13442 Cytochrome C oxidase, cbb3-type, subunit III RD1_RS07275 PF01903 CbiX RD1_RS07285 PF00155 Aminotransferase class I and II RD1_RS07290 PF00535 Glycosyl transferase family 2 RD1_RS07295 PF13440 RD1_RS07295 RD1_RS07300 PF00535 Glycosyl transferase family 2 RD1_RS07305 PF00732 GMC oxidoreductase RD1_RS07305 PF05199 GMC oxidoreductase RD1_RS07310 PF16868 RD1_RS07310 RD1_RS07315 PF06808 RD1_RS07315 RD1_RS07325 PF00248 Aldo/keto reductase family RD1_RS07330 PF00873 AcrB/AcrD/AcrF family RD1_RS07335 PF16576 RD1_RS07335 RD1_RS07345 PF00578 AhpC/TSA family RD1_RS07350 PF00206 Lyase RD1_RS07350 PF14698 Argininosuccinate lyase C-terminal RD1_RS07355 PF11196 RD1_RS07355 RD1_RS07360 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain RD1_RS07360 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain RD1_RS07365 PF13779 RD1_RS07365 RD1_RS07370 PF13717 RD1_RS07370 RD1_RS07375 PF00005 ABC transporter RD1_RS07385 PF01553 Acyltransferase RD1_RS07390 PF01243 Pyridoxamine 5'-phosphate oxidase RD1_RS07395 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain RD1_RS07395 PF07992 Pyridine nucleotide-disulphide oxidoreductase RD1_RS07400 PF01124 MAPEG family RD1_RS07410 PF01124 MAPEG family RD1_RS07420 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) RD1_RS07420 PF00364 Biotin-requiring enzyme RD1_RS07420 PF02817 e3 binding domain RD1_RS07425 PF00676 Dehydrogenase E1 component RD1_RS07425 PF02779 Transketolase, pyrimidine binding domain RD1_RS07425 PF16078 RD1_RS07425 RD1_RS07425 PF16870 RD1_RS07425 RD1_RS07430 PF05656 RD1_RS07430 RD1_RS07435 PF00549 CoA-ligase RD1_RS07435 PF02629 CoA binding domain RD1_RS07455 PF00549 CoA-ligase RD1_RS07455 PF08442 ATP-grasp domain RD1_RS07465 PF00056 lactate/malate dehydrogenase, NAD binding domain RD1_RS07465 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain RD1_RS07470 PF01925 RD1_RS07470 RD1_RS07480 PF03328 HpcH/HpaI aldolase/citrate lyase family RD1_RS07485 PF07298 RD1_RS07485 RD1_RS07490 PF08410 RD1_RS07490 RD1_RS07495 PF13452 N-terminal half of MaoC dehydratase RD1_RS07500 PF14247 RD1_RS07500 RD1_RS07505 PF06707 Protein of unknown function (DUF1194) RD1_RS07510 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit RD1_RS07515 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit RD1_RS07520 PF00890 FAD binding domain RD1_RS07520 PF02910 Fumarate reductase flavoprotein C-term RD1_RS07530 PF13085 2Fe-2S iron-sulfur cluster binding domain RD1_RS07530 PF13534 4Fe-4S dicluster domain RD1_RS07545 PF09347 Domain of unknown function (DUF1989) RD1_RS07550 PF01048 Phosphorylase superfamily RD1_RS07555 PF01642 Methylmalonyl-CoA mutase RD1_RS07555 PF02310 B12 binding domain RD1_RS07565 PF01553 Acyltransferase RD1_RS07570 PF00107 Zinc-binding dehydrogenase RD1_RS07570 PF08240 Alcohol dehydrogenase GroES-like domain RD1_RS07575 PF00196 Bacterial regulatory proteins, luxR family RD1_RS07575 PF03472 Autoinducer binding domain RD1_RS07580 PF00765 Autoinducer synthetase RD1_RS07585 PF13538 UvrD-like helicase C-terminal domain RD1_RS07585 PF13604 AAA domain RD1_RS07590 PF09608 RD1_RS07590 RD1_RS07595 PF01925 RD1_RS07595 RD1_RS07600 PF02653 RD1_RS07600 RD1_RS07605 PF02653 RD1_RS07605 RD1_RS07610 PF00005 ABC transporter RD1_RS07615 PF02608 Basic membrane protein RD1_RS07620 PF00583 Acetyltransferase (GNAT) family RD1_RS07625 PF00814 Glycoprotease family RD1_RS07630 PF01106 NifU-like domain RD1_RS07630 PF08712 Scaffold protein Nfu/NifU N terminal RD1_RS07635 PF00582 Universal stress protein family RD1_RS07640 PF04940 Sensors of blue-light using FAD RD1_RS07645 PF01063 Aminotransferase class IV RD1_RS07655 PF01435 Peptidase family M48 RD1_RS07660 PF04134 RD1_RS07660 RD1_RS07665 PF09360 Iron-binding zinc finger CDGSH type RD1_RS07670 PF00919 Uncharacterized protein family UPF0004 RD1_RS07670 PF04055 Radical SAM superfamily RD1_RS07675 PF05170 RD1_RS07675 RD1_RS07675 PF13502 RD1_RS07675 RD1_RS07680 PF00793 DAHP synthetase I family RD1_RS07690 PF03167 Uracil DNA glycosylase superfamily RD1_RS07695 PF07179 RD1_RS07695 RD1_RS07700 PF04945 YHS domain RD1_RS07705 PF00581 Rhodanese-like domain RD1_RS07710 PF13632 Glycosyl transferase family group 2 RD1_RS07715 PF04349 Periplasmic glucan biosynthesis protein, MdoG RD1_RS07720 PF10129 RD1_RS07720 RD1_RS07730 PF02515 CoA-transferase family III RD1_RS07735 PF00205 Thiamine pyrophosphate enzyme, central domain RD1_RS07735 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain RD1_RS07735 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain RD1_RS07740 PF07750 RD1_RS07740 RD1_RS07745 PF00202 Aminotransferase class-III RD1_RS07750 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain RD1_RS07750 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain RD1_RS07755 PF00270 DEAD/DEAH box helicase RD1_RS07755 PF00271 Helicase conserved C-terminal domain RD1_RS07755 PF04408 Helicase associated domain (HA2) RD1_RS07755 PF08482 RD1_RS07755 RD1_RS07760 PF03308 ArgK protein RD1_RS07765 PF00830 Ribosomal L28 family RD1_RS07775 PF04314 Protein of unknown function (DUF461) RD1_RS07780 PF02146 Sir2 family RD1_RS07785 PF00795 Carbon-nitrogen hydrolase RD1_RS07790 PF01176 Translation initiation factor 1A / IF-1 RD1_RS07795 PF02545 Maf-like protein RD1_RS07800 PF10150 Ribonuclease E/G family RD1_RS07805 PF03884 Domain of unknown function (DUF329) RD1_RS07810 PF00999 Sodium/hydrogen exchanger family RD1_RS07810 PF02254 TrkA-N domain RD1_RS07815 PF02082 Transcriptional regulator RD1_RS07825 PF05940 RD1_RS07825 RD1_RS07830 PF07298 RD1_RS07830 RD1_RS07835 PF04055 Radical SAM superfamily RD1_RS07835 PF06969 HemN C-terminal domain RD1_RS07840 PF02310 B12 binding domain RD1_RS07840 PF04055 Radical SAM superfamily RD1_RS07845 PF03009 Glycerophosphoryl diester phosphodiesterase family RD1_RS07850 PF02397 RD1_RS07850 RD1_RS07850 PF13727 CoA-binding domain RD1_RS07855 PF01965 DJ-1/PfpI family RD1_RS07855 PF12833 Helix-turn-helix domain RD1_RS07860 PF01266 FAD dependent oxidoreductase RD1_RS07865 PF04267 Sarcosine oxidase, delta subunit family RD1_RS07870 PF01571 Aminomethyltransferase folate-binding domain RD1_RS07870 PF08669 Glycine cleavage T-protein C-terminal barrel domain RD1_RS07870 PF12831 FAD dependent oxidoreductase RD1_RS07870 PF13510 2Fe-2S iron-sulfur cluster binding domain RD1_RS07875 PF04268 Sarcosine oxidase, gamma subunit family RD1_RS07880 PF07690 Major Facilitator Superfamily RD1_RS07890 PF00563 EAL domain RD1_RS07890 PF00990 GGDEF domain RD1_RS07900 PF00441 Acyl-CoA dehydrogenase, C-terminal domain RD1_RS07900 PF02770 Acyl-CoA dehydrogenase, middle domain RD1_RS07900 PF02771 Acyl-CoA dehydrogenase, N-terminal domain RD1_RS07905 PF04519 RD1_RS07905 RD1_RS07910 PF06808 RD1_RS07910 RD1_RS07915 PF04290 RD1_RS07915 RD1_RS07920 PF03480 Bacterial extracellular solute-binding protein, family 7 RD1_RS07925 PF00392 Bacterial regulatory proteins, gntR family RD1_RS07925 PF07702 UTRA domain RD1_RS07930 PF00005 ABC transporter RD1_RS07930 PF00664 ABC transporter transmembrane region RD1_RS07935 PF13437 HlyD family secretion protein RD1_RS07935 PF13533 Biotin-lipoyl like RD1_RS07945 PF01794 RD1_RS07945 RD1_RS07950 PF01979 Amidohydrolase family RD1_RS07955 PF01380 SIS domain RD1_RS07960 PF00392 Bacterial regulatory proteins, gntR family RD1_RS07960 PF07702 UTRA domain RD1_RS07965 PF01869 BadF/BadG/BcrA/BcrD ATPase family RD1_RS07970 PF13416 Bacterial extracellular solute-binding protein RD1_RS07975 PF00528 Binding-protein-dependent transport system inner membrane component RD1_RS07980 PF00528 Binding-protein-dependent transport system inner membrane component RD1_RS07985 PF01408 Oxidoreductase family, NAD-binding Rossmann fold RD1_RS07990 PF00005 ABC transporter RD1_RS07990 PF08402 TOBE domain RD1_RS07995 PF11736 Protein of unknown function (DUF3299) RD1_RS08000 PF11736 Protein of unknown function (DUF3299) RD1_RS08005 PF02687 RD1_RS08005 RD1_RS08005 PF12704 MacB-like periplasmic core domain RD1_RS08010 PF00005 ABC transporter RD1_RS08015 PF10986 RD1_RS08015 RD1_RS08025 PF01135 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) RD1_RS08030 PF02321 Outer membrane efflux protein RD1_RS08050 PF01132 Elongation factor P (EF-P) OB domain RD1_RS08050 PF08207 Elongation factor P (EF-P) KOW-like domain RD1_RS08050 PF09285 Elongation factor P, C-terminal RD1_RS08055 PF01571 Aminomethyltransferase folate-binding domain RD1_RS08055 PF08669 Glycine cleavage T-protein C-terminal barrel domain RD1_RS08060 PF00535 Glycosyl transferase family 2 RD1_RS08065 PF00005 ABC transporter RD1_RS08065 PF00664 ABC transporter transmembrane region RD1_RS08070 PF00266 Aminotransferase class-V RD1_RS08080 PF00155 Aminotransferase class I and II RD1_RS08085 PF00378 Enoyl-CoA hydratase/isomerase family RD1_RS08090 PF00133 tRNA synthetases class I (I, L, M and V) RD1_RS08090 PF08264 Anticodon-binding domain of tRNA RD1_RS08090 PF10458 Valyl tRNA synthetase tRNA binding arm RD1_RS08095 PF05153 Family of unknown function (DUF706) RD1_RS08100 PF05721 Phytanoyl-CoA dioxygenase (PhyH) RD1_RS08105 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain RD1_RS08105 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase RD1_RS08110 PF09994 Uncharacterized alpha/beta hydrolase domain (DUF2235) RD1_RS08115 PF03061 Thioesterase superfamily RD1_RS08120 PF02219 Methylenetetrahydrofolate reductase RD1_RS08125 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RD1_RS08125 PF03466 LysR substrate binding domain RD1_RS08135 PF06945 RD1_RS08135 RD1_RS08140 PF03652 Uncharacterised protein family (UPF0081) RD1_RS08170 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain RD1_RS08170 PF02777 Iron/manganese superoxide dismutases, C-terminal domain RD1_RS08175 PF03641 Possible lysine decarboxylase RD1_RS08180 PF01476 LysM domain RD1_RS08185 PF00005 ABC transporter RD1_RS08185 PF00664 ABC transporter transmembrane region RD1_RS08190 PF00106 short chain dehydrogenase RD1_RS08195 PF03625 Domain of unknown function DUF302 RD1_RS08200 PF00873 AcrB/AcrD/AcrF family RD1_RS08205 PF16576 RD1_RS08205 RD1_RS08210 PF09976 Tetratricopeptide repeat RD1_RS08215 PF13360 PQQ-like domain RD1_RS08215 PF13570 PQQ-like domain RD1_RS08220 PF01926 50S ribosome-binding GTPase RD1_RS08220 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal RD1_RS08230 PF09994 Uncharacterized alpha/beta hydrolase domain (DUF2235) RD1_RS08240 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase RD1_RS08240 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain RD1_RS08245 PF01266 FAD dependent oxidoreductase RD1_RS08250 PF04267 Sarcosine oxidase, delta subunit family RD1_RS08255 PF01571 Aminomethyltransferase folate-binding domain RD1_RS08255 PF07992 Pyridine nucleotide-disulphide oxidoreductase RD1_RS08255 PF08669 Glycine cleavage T-protein C-terminal barrel domain RD1_RS08255 PF13510 2Fe-2S iron-sulfur cluster binding domain RD1_RS08260 PF04268 Sarcosine oxidase, gamma subunit family RD1_RS08270 PF01807 CHC2 zinc finger RD1_RS08270 PF08275 DNA primase catalytic core, N-terminal domain RD1_RS08270 PF10410 DnaB-helicase binding domain of primase RD1_RS08270 PF13155 Toprim-like RD1_RS08275 PF00140 Sigma-70 factor, region 1 RD1_RS08275 PF03979 Sigma-70 factor, region 1 RD1_RS08275 PF04539 Sigma-70 region 3 RD1_RS08275 PF04542 Sigma-70 region 2 RD1_RS08275 PF04545 Sigma-70, region 4 RD1_RS08275 PF04546 Sigma-70, non-essential region RD1_RS08285 PF10115 RD1_RS08285 RD1_RS08295 PF01894 Uncharacterised protein family UPF0047 RD1_RS08300 PF03477 ATP cone domain RD1_RS08305 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region RD1_RS08305 PF01872 RibD C-terminal domain RD1_RS08310 PF00677 Lumazine binding domain RD1_RS08315 PF00925 GTP cyclohydrolase II RD1_RS08315 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase RD1_RS08320 PF00885 6,7-dimethyl-8-ribityllumazine synthase RD1_RS08325 PF01029 NusB family RD1_RS08335 PF06319 Protein of unknown function (DUF1052) RD1_RS08345 PF00583 Acetyltransferase (GNAT) family RD1_RS08355 PF12625 RD1_RS08355 RD1_RS08355 PF12833 Helix-turn-helix domain RD1_RS08365 PF00849 RNA pseudouridylate synthase RD1_RS08370 PF00140 Sigma-70 factor, region 1 RD1_RS08370 PF04542 Sigma-70 region 2 RD1_RS08370 PF04545 Sigma-70, region 4 RD1_RS08375 PF01432 Peptidase family M3 RD1_RS08375 PF08439 Oligopeptidase F RD1_RS08385 PF01068 ATP dependent DNA ligase domain RD1_RS08385 PF04675 DNA ligase N terminus RD1_RS08385 PF04679 ATP dependent DNA ligase C terminal region RD1_RS08395 PF12146 Putative lysophospholipase RD1_RS08400 PF02036 SCP-2 sterol transfer family RD1_RS08405 PF14559 Tetratricopeptide repeat RD1_RS08410 PF00271 Helicase conserved C-terminal domain RD1_RS08415 PF01479 S4 domain RD1_RS08420 PF00037 4Fe-4S binding domain RD1_RS08420 PF11953 Domain of unknown function (DUF3470) RD1_RS08425 PF02559 CarD-like/TRCF domain RD1_RS08430 PF02654 RD1_RS08430 RD1_RS08435 PF02277 Phosphoribosyltransferase RD1_RS08440 PF00999 Sodium/hydrogen exchanger family RD1_RS08440 PF02254 TrkA-N domain RD1_RS08445 PF01037 AsnC family RD1_RS08445 PF13404 AsnC-type helix-turn-helix domain RD1_RS08450 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily RD1_RS08450 PF14696 Hydroxyphenylpyruvate dioxygenase, HPPD, N-terminal RD1_RS08460 PF04402 Protein of unknown function (DUF541) RD1_RS08465 PF01053 Cys/Met metabolism PLP-dependent enzyme RD1_RS08470 PF00155 Aminotransferase class I and II RD1_RS08475 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RD1_RS08475 PF03466 LysR substrate binding domain RD1_RS08480 PF00291 Pyridoxal-phosphate dependent enzyme RD1_RS08485 PF04069 Substrate binding domain of ABC-type glycine betaine transport system RD1_RS08490 PF00005 ABC transporter RD1_RS08495 PF00528 Binding-protein-dependent transport system inner membrane component RD1_RS08495 PF10947 RD1_RS08495 RD1_RS08500 PF12697 Alpha/beta hydrolase family RD1_RS08515 PF00665 Integrase core domain RD1_RS08520 PF01527 Transposase RD1_RS08525 PF00239 Resolvase, N terminal domain RD1_RS08525 PF13408 Recombinase zinc beta ribbon domain RD1_RS08550 PF01527 Transposase RD1_RS08555 PF13276 RD1_RS08555 RD1_RS08555 PF13683 RD1_RS08555 RD1_RS08575 PF02082 Transcriptional regulator RD1_RS08580 PF02492 CobW/HypB/UreG, nucleotide-binding domain RD1_RS08580 PF07683 Cobalamin synthesis protein cobW C-terminal domain RD1_RS08585 PF08856 RD1_RS08585 RD1_RS08595 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle RD1_RS08600 PF00005 ABC transporter RD1_RS08605 PF00005 ABC transporter RD1_RS08610 PF00528 Binding-protein-dependent transport system inner membrane component RD1_RS08615 PF00528 Binding-protein-dependent transport system inner membrane component RD1_RS08620 PF00892 EamA-like transporter family RD1_RS08625 PF01970 RD1_RS08625 RD1_RS08630 PF07331 RD1_RS08630 RD1_RS08635 PF03401 Tripartite tricarboxylate transporter family receptor RD1_RS08640 PF00501 AMP-binding enzyme RD1_RS08640 PF13193 AMP-binding enzyme C-terminal domain RD1_RS08645 PF13463 Winged helix DNA-binding domain RD1_RS08650 PF06707 Protein of unknown function (DUF1194) RD1_RS08655 PF06707 Protein of unknown function (DUF1194) RD1_RS08660 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily RD1_RS08665 PF00303 Thymidylate synthase RD1_RS08670 PF00186 Dihydrofolate reductase RD1_RS08675 PF00313 'Cold-shock' DNA-binding domain RD1_RS08680 PF03960 ArsC family RD1_RS08685 PF07681 RD1_RS08685 RD1_RS08690 PF09836 Uncharacterized protein conserved in bacteria (DUF2063) RD1_RS08695 PF05114 Protein of unknown function (DUF692) RD1_RS08700 PF10048 RD1_RS08700 RD1_RS08705 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) RD1_RS08705 PF02824 TGS domain RD1_RS08705 PF03129 Anticodon binding domain RD1_RS08705 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain RD1_RS08715 PF12697 Alpha/beta hydrolase family RD1_RS08720 PF12697 Alpha/beta hydrolase family RD1_RS08725 PF06850 RD1_RS08725 RD1_RS08730 PF07167 RD1_RS08730 RD1_RS08735 PF09361 RD1_RS08735 RD1_RS08740 PF05233 RD1_RS08740 RD1_RS08740 PF07879 RD1_RS08740 RD1_RS08745 PF01266 FAD dependent oxidoreductase RD1_RS08750 PF00120 Glutamine synthetase, catalytic domain RD1_RS08755 PF00117 Glutamine amidotransferase class-I RD1_RS08760 PF00120 Glutamine synthetase, catalytic domain RD1_RS08765 PF00528 Binding-protein-dependent transport system inner membrane component RD1_RS08770 PF00528 Binding-protein-dependent transport system inner membrane component RD1_RS08775 PF00497 Bacterial extracellular solute-binding proteins, family 3 RD1_RS08780 PF00005 ABC transporter RD1_RS08785 PF12974 ABC transporter, phosphonate, periplasmic substrate-binding protein RD1_RS08790 PF05099 Tellurite resistance protein TerB RD1_RS08795 PF05099 Tellurite resistance protein TerB RD1_RS08800 PF04378 Ribosomal RNA small subunit methyltransferase D, RsmJ RD1_RS08810 PF00117 Glutamine amidotransferase class-I RD1_RS08810 PF06418 CTP synthase N-terminus RD1_RS08815 PF03840 Preprotein translocase SecG subunit RD1_RS08825 PF02979 Nitrile hydratase, alpha chain RD1_RS08830 PF02211 Nitrile hydratase beta subunit RD1_RS08835 PF02211 Nitrile hydratase beta subunit RD1_RS08845 PF00709 Adenylosuccinate synthetase RD1_RS08850 PF11003 RD1_RS08850 RD1_RS08860 PF04263 Thiamin pyrophosphokinase, catalytic domain RD1_RS08860 PF04265 Thiamin pyrophosphokinase, vitamin B1 binding domain RD1_RS08865 PF00892 EamA-like transporter family RD1_RS08870 PF03313 RD1_RS08870 RD1_RS08870 PF03315 Serine dehydratase beta chain RD1_RS08875 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) RD1_RS08880 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain RD1_RS08880 PF07992 Pyridine nucleotide-disulphide oxidoreductase RD1_RS08885 PF01145 SPFH domain / Band 7 family RD1_RS08890 PF01145 SPFH domain / Band 7 family RD1_RS08895 PF09838 RD1_RS08895 RD1_RS08900 PF13180 PDZ domain RD1_RS08900 PF13365 Trypsin-like peptidase domain RD1_RS08905 PF01336 OB-fold nucleic acid binding domain RD1_RS08910 PF00111 2Fe-2S iron-sulfur cluster binding domain RD1_RS08915 PF13517 Repeat domain in Vibrio, Colwellia, Bradyrhizobium and Shewanella RD1_RS08920 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain RD1_RS08920 PF02843 Phosphoribosylglycinamide synthetase, C domain RD1_RS08920 PF02844 Phosphoribosylglycinamide synthetase, N domain RD1_RS08925 PF02601 RD1_RS08925 RD1_RS08925 PF13742 RD1_RS08925 RD1_RS08935 PF00448 SRP54-type protein, GTPase domain RD1_RS08935 PF02881 SRP54-type protein, helical bundle domain RD1_RS08940 PF00892 EamA-like transporter family RD1_RS08945 PF04279 RD1_RS08945 RD1_RS08950 PF00027 Cyclic nucleotide-binding domain RD1_RS08955 PF00043 Glutathione S-transferase, C-terminal domain RD1_RS08955 PF02798 Glutathione S-transferase, N-terminal domain RD1_RS08960 PF05990 Alpha/beta hydrolase of unknown function (DUF900) RD1_RS08965 PF01053 Cys/Met metabolism PLP-dependent enzyme RD1_RS08970 PF02649 Type I GTP cyclohydrolase folE2 RD1_RS08975 PF02386 Cation transport protein RD1_RS08980 PF00205 Thiamine pyrophosphate enzyme, central domain RD1_RS08980 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain RD1_RS08980 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain RD1_RS08985 PF01471 Putative peptidoglycan binding domain RD1_RS08985 PF13365 Trypsin-like peptidase domain RD1_RS08990 PF02091 Glycyl-tRNA synthetase alpha subunit RD1_RS09000 PF02092 RD1_RS09000 RD1_RS09000 PF05746 DALR anticodon binding domain RD1_RS09005 PF00391 PEP-utilising enzyme, mobile domain RD1_RS09005 PF02896 PEP-utilising enzyme, TIM barrel domain RD1_RS09010 PF07486 Cell Wall Hydrolase RD1_RS09015 PF02152 Dihydroneopterin aldolase RD1_RS09020 PF00809 Pterin binding enzyme RD1_RS09025 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain RD1_RS09025 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I RD1_RS09025 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II RD1_RS09025 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III RD1_RS09030 PF00892 EamA-like transporter family RD1_RS09035 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain RD1_RS09035 PF07991 Acetohydroxy acid isomeroreductase, catalytic domain RD1_RS09040 PF01037 AsnC family RD1_RS09040 PF13404 AsnC-type helix-turn-helix domain RD1_RS09045 PF01037 AsnC family RD1_RS09045 PF13404 AsnC-type helix-turn-helix domain RD1_RS09050 PF00266 Aminotransferase class-V RD1_RS09055 PF01494 FAD binding domain RD1_RS09065 PF13419 Haloacid dehalogenase-like hydrolase RD1_RS09070 PF00392 Bacterial regulatory proteins, gntR family RD1_RS09070 PF07729 FCD domain RD1_RS09075 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain RD1_RS09075 PF13641 Glycosyltransferase like family 2 RD1_RS09080 PF00117 Glutamine amidotransferase class-I RD1_RS09080 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain RD1_RS09085 PF09424 Yqey-like protein RD1_RS09090 PF08279 HTH domain RD1_RS09090 PF13280 RD1_RS09090 RD1_RS09095 PF10003 RD1_RS09095 RD1_RS09100 PF00115 Cytochrome C and Quinol oxidase polypeptide I RD1_RS09110 PF08447 PAS fold RD1_RS09115 PF03099 Biotin/lipoate A/B protein ligase family RD1_RS09130 PF00005 ABC transporter RD1_RS09130 PF00664 ABC transporter transmembrane region RD1_RS09135 PF00501 AMP-binding enzyme RD1_RS09135 PF13193 AMP-binding enzyme C-terminal domain RD1_RS09140 PF01663 Type I phosphodiesterase / nucleotide pyrophosphatase RD1_RS09145 PF00005 ABC transporter RD1_RS09145 PF08352 Oligopeptide/dipeptide transporter, C-terminal region RD1_RS09150 PF00528 Binding-protein-dependent transport system inner membrane component RD1_RS09150 PF12911 RD1_RS09150 RD1_RS09155 PF00528 Binding-protein-dependent transport system inner membrane component RD1_RS09160 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle RD1_RS09165 PF02129 X-Pro dipeptidyl-peptidase (S15 family) RD1_RS09165 PF08530 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain RD1_RS09170 PF05161 MOFRL family RD1_RS09170 PF13660 Domain of unknown function (DUF4147) RD1_RS09175 PF02580 D-Tyr-tRNA(Tyr) deacylase RD1_RS09180 PF11781 RD1_RS09180 RD1_RS09190 PF13421 RD1_RS09190 RD1_RS09190 PF14237 RD1_RS09190 RD1_RS09195 PF11150 RD1_RS09195 RD1_RS09200 PF05816 RD1_RS09200 RD1_RS09205 PF10112 RD1_RS09205 RD1_RS09210 PF00849 RNA pseudouridylate synthase RD1_RS09210 PF01479 S4 domain RD1_RS09215 PF14437 RD1_RS09215 RD1_RS09220 PF13483 Beta-lactamase superfamily domain RD1_RS09225 PF05875 RD1_RS09225 RD1_RS09230 PF00471 Ribosomal protein L33 RD1_RS09240 PF01510 N-acetylmuramoyl-L-alanine amidase RD1_RS09250 PF01425 Amidase RD1_RS09255 PF02686 Glu-tRNAGln amidotransferase C subunit RD1_RS09260 PF01027 Inhibitor of apoptosis-promoting Bax1 RD1_RS09265 PF06568 RD1_RS09265 RD1_RS09270 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RD1_RS09270 PF03466 LysR substrate binding domain RD1_RS09275 PF01381 Helix-turn-helix RD1_RS09280 PF00459 Inositol monophosphatase family RD1_RS09285 PF01979 Amidohydrolase family RD1_RS09290 PF01979 Amidohydrolase family RD1_RS09295 PF00571 CBS domain RD1_RS09295 PF01769 Divalent cation transporter RD1_RS09295 PF03448 MgtE intracellular N domain RD1_RS09300 PF01812 5-formyltetrahydrofolate cyclo-ligase family RD1_RS09305 PF13277 YmdB-like protein RD1_RS09310 PF00892 EamA-like transporter family RD1_RS09315 PF02080 TrkA-C domain RD1_RS09315 PF03600 Citrate transporter RD1_RS09325 PF02080 TrkA-C domain RD1_RS09325 PF03600 Citrate transporter RD1_RS09335 PF01709 Transcriptional regulator RD1_RS09345 PF00892 EamA-like transporter family RD1_RS09350 PF00440 Bacterial regulatory proteins, tetR family RD1_RS09350 PF13977 Bacterial transcriptional repressor RD1_RS09355 PF00884 Sulfatase RD1_RS09355 PF12411 RD1_RS09355 RD1_RS09360 PF00171 Aldehyde dehydrogenase family RD1_RS09370 PF00732 GMC oxidoreductase RD1_RS09370 PF05199 GMC oxidoreductase RD1_RS09375 PF00565 Staphylococcal nuclease homologue RD1_RS09380 PF06114 Domain of unknown function (DUF955) RD1_RS09380 PF09856 RD1_RS09380 RD1_RS09380 PF13560 Helix-turn-helix domain RD1_RS09385 PF07690 Major Facilitator Superfamily RD1_RS09390 PF01039 Carboxyl transferase domain RD1_RS09410 PF00289 Carbamoyl-phosphate synthase L chain, N-terminal domain RD1_RS09410 PF00364 Biotin-requiring enzyme RD1_RS09410 PF02785 Biotin carboxylase C-terminal domain RD1_RS09410 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain RD1_RS09415 PF13778 RD1_RS09415 RD1_RS09425 PF01642 Methylmalonyl-CoA mutase RD1_RS09425 PF02310 B12 binding domain RD1_RS09430 PF13468 Glyoxalase-like domain RD1_RS09435 PF00583 Acetyltransferase (GNAT) family RD1_RS09440 PF00226 DnaJ domain RD1_RS09440 PF05099 Tellurite resistance protein TerB RD1_RS09450 PF02541 Ppx/GppA phosphatase family RD1_RS09455 PF02503 Polyphosphate kinase middle domain RD1_RS09455 PF13089 Polyphosphate kinase N-terminal domain RD1_RS09455 PF13090 Polyphosphate kinase C-terminal domain RD1_RS09460 PF00308 Bacterial dnaA protein RD1_RS09465 PF01594 RD1_RS09465 RD1_RS09470 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) RD1_RS09470 PF03129 Anticodon binding domain RD1_RS09475 PF11157 RD1_RS09475 RD1_RS09480 PF02687 RD1_RS09480 RD1_RS09480 PF12704 MacB-like periplasmic core domain RD1_RS09485 PF00005 ABC transporter RD1_RS09490 PF02615 Malate/L-lactate dehydrogenase RD1_RS09495 PF04657 RD1_RS09495 RD1_RS09510 PF00034 Cytochrome c RD1_RS09525 PF00204 DNA gyrase B RD1_RS09525 PF00986 DNA gyrase B subunit, carboxyl terminus RD1_RS09525 PF01751 Toprim domain RD1_RS09525 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RD1_RS09535 PF03403 Platelet-activating factor acetylhydrolase, isoform II RD1_RS09540 PF01554 MatE RD1_RS09545 PF05013 N-formylglutamate amidohydrolase RD1_RS09550 PF01073 3-beta hydroxysteroid dehydrogenase/isomerase family RD1_RS09555 PF01266 FAD dependent oxidoreductase RD1_RS09560 PF01636 Phosphotransferase enzyme family RD1_RS09565 PF00441 Acyl-CoA dehydrogenase, C-terminal domain RD1_RS09565 PF02770 Acyl-CoA dehydrogenase, middle domain RD1_RS09565 PF02771 Acyl-CoA dehydrogenase, N-terminal domain RD1_RS09570 PF01244 Membrane dipeptidase (Peptidase family M19) RD1_RS09585 PF01416 tRNA pseudouridine synthase RD1_RS09590 PF04317 RD1_RS09590 RD1_RS09595 PF13673 Acetyltransferase (GNAT) domain RD1_RS09600 PF05128 RD1_RS09600 RD1_RS09605 PF00133 tRNA synthetases class I (I, L, M and V) RD1_RS09605 PF08264 Anticodon-binding domain of tRNA RD1_RS09610 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain RD1_RS09615 PF01066 CDP-alcohol phosphatidyltransferase RD1_RS09620 PF00589 Phage integrase family RD1_RS09620 PF02899 Phage integrase, N-terminal SAM-like domain RD1_RS09625 PF04340 Protein of unknown function, DUF484 RD1_RS09630 PF00923 Transaldolase RD1_RS09635 PF00270 DEAD/DEAH box helicase RD1_RS09635 PF00271 Helicase conserved C-terminal domain RD1_RS09645 PF01554 MatE RD1_RS09650 PF06325 Ribosomal protein L11 methyltransferase (PrmA) RD1_RS09660 PF06568 RD1_RS09660 RD1_RS09665 PF02075 Crossover junction endodeoxyribonuclease RuvC RD1_RS09670 PF01330 RuvA N terminal domain RD1_RS09670 PF07499 RuvA, C-terminal domain RD1_RS09670 PF14520 Helix-hairpin-helix domain RD1_RS09675 PF05491 Holliday junction DNA helicase ruvB C-terminus RD1_RS09675 PF05496 Holliday junction DNA helicase ruvB N-terminus RD1_RS09685 PF03061 Thioesterase superfamily RD1_RS09690 PF01618 RD1_RS09690 RD1_RS09695 PF02472 Biopolymer transport protein ExbD/TolR RD1_RS09705 PF04052 TolB amino-terminal domain RD1_RS09705 PF07676 WD40-like Beta Propeller Repeat RD1_RS09710 PF00691 OmpA family RD1_RS09715 PF13432 Tetratricopeptide repeat RD1_RS09720 PF01171 PP-loop family RD1_RS09725 PF00004 ATPase family associated with various cellular activities (AAA) RD1_RS09725 PF01434 Peptidase family M41 RD1_RS09725 PF06480 FtsH Extracellular RD1_RS09730 PF03473 MOSC domain RD1_RS09740 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain RD1_RS09740 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain RD1_RS09745 PF03061 Thioesterase superfamily RD1_RS09750 PF00149 Calcineurin-like phosphoesterase RD1_RS09755 PF00270 DEAD/DEAH box helicase RD1_RS09755 PF00271 Helicase conserved C-terminal domain RD1_RS09755 PF08494 RD1_RS09755 RD1_RS09765 PF01478 Type IV leader peptidase family RD1_RS09770 PF13432 Tetratricopeptide repeat RD1_RS09775 PF07719 Tetratricopeptide repeat RD1_RS09775 PF13432 Tetratricopeptide repeat RD1_RS09780 PF00482 Type II secretion system (T2SS), protein F RD1_RS09785 PF00482 Type II secretion system (T2SS), protein F RD1_RS09790 PF00437 Type II/IV secretion system protein RD1_RS09795 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain RD1_RS09805 PF00263 RD1_RS09805 RD1_RS09805 PF13629 RD1_RS09805 RD1_RS09810 PF16976 RD1_RS09810 RD1_RS09825 PF01464 Transglycosylase SLT domain RD1_RS09830 PF01144 Coenzyme A transferase RD1_RS09835 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RD1_RS09835 PF13426 PAS domain RD1_RS09840 PF01144 Coenzyme A transferase RD1_RS09845 PF01131 DNA topoisomerase RD1_RS09845 PF01396 RD1_RS09845 RD1_RS09845 PF01751 Toprim domain RD1_RS09845 PF13368 RD1_RS09845 RD1_RS09850 PF02481 DNA recombination-mediator protein A RD1_RS09855 PF01523 Putative modulator of DNA gyrase RD1_RS09860 PF00116 Cytochrome C oxidase subunit II, periplasmic domain RD1_RS09860 PF02790 Cytochrome C oxidase subunit II, transmembrane domain RD1_RS09865 PF01040 UbiA prenyltransferase family RD1_RS09875 PF04442 Cytochrome c oxidase assembly protein CtaG/Cox11 RD1_RS09880 PF00510 Cytochrome c oxidase subunit III RD1_RS09885 PF02104 RD1_RS09885 RD1_RS09890 PF00291 Pyridoxal-phosphate dependent enzyme RD1_RS09890 PF14821 Threonine synthase N terminus RD1_RS09895 PF00675 Insulinase (Peptidase family M16) RD1_RS09895 PF05193 Peptidase M16 inactive domain RD1_RS09900 PF13302 Acetyltransferase (GNAT) domain RD1_RS09905 PF13483 Beta-lactamase superfamily domain RD1_RS09910 PF01565 FAD binding domain RD1_RS09910 PF02913 FAD linked oxidases, C-terminal domain RD1_RS09915 PF04945 YHS domain RD1_RS09920 PF00156 Phosphoribosyl transferase domain RD1_RS09925 PF01810 RD1_RS09925 RD1_RS09930 PF01048 Phosphorylase superfamily RD1_RS09935 PF00916 RD1_RS09935 RD1_RS09935 PF01740 STAS domain RD1_RS09940 PF01613 Flavin reductase like domain RD1_RS09945 PF13527 Acetyltransferase (GNAT) domain RD1_RS09950 PF12787 RD1_RS09950 RD1_RS09955 PF00293 NUDIX domain RD1_RS09960 PF06676 RD1_RS09960 RD1_RS09965 PF00696 Amino acid kinase family RD1_RS09965 PF01842 ACT domain RD1_RS09965 PF13840 ACT domain RD1_RS09970 PF00391 PEP-utilising enzyme, mobile domain RD1_RS09970 PF02896 PEP-utilising enzyme, TIM barrel domain RD1_RS09970 PF05524 PEP-utilising enzyme, N-terminal RD1_RS09970 PF13185 GAF domain RD1_RS09975 PF05145 RD1_RS09975 RD1_RS09980 PF10000 ACT domain RD1_RS09985 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain RD1_RS09985 PF00672 HAMP domain RD1_RS09985 PF02743 Cache domain RD1_RS09990 PF00005 ABC transporter RD1_RS09995 PF00005 ABC transporter RD1_RS09995 PF12399 Branched-chain amino acid ATP-binding cassette transporter RD1_RS10000 PF02653 RD1_RS10000 RD1_RS10005 PF02653 RD1_RS10005 RD1_RS10010 PF13433 Periplasmic binding protein domain RD1_RS10020 PF00465 Iron-containing alcohol dehydrogenase RD1_RS10025 PF00171 Aldehyde dehydrogenase family RD1_RS10030 PF00120 Glutamine synthetase, catalytic domain RD1_RS10035 PF03480 Bacterial extracellular solute-binding protein, family 7 RD1_RS10040 PF06808 RD1_RS10040 RD1_RS10045 PF04290 RD1_RS10045 RD1_RS10050 PF05013 N-formylglutamate amidohydrolase RD1_RS10055 PF01380 SIS domain RD1_RS10055 PF01418 Helix-turn-helix domain, rpiR family RD1_RS10060 PF01019 Gamma-glutamyltranspeptidase RD1_RS10065 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain RD1_RS10065 PF07685 CobB/CobQ-like glutamine amidotransferase domain RD1_RS10070 PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP RD1_RS10070 PF12557 Cob(I)alamin adenosyltransferase N terminal RD1_RS10075 PF00497 Bacterial extracellular solute-binding proteins, family 3 RD1_RS10080 PF00528 Binding-protein-dependent transport system inner membrane component RD1_RS10085 PF00005 ABC transporter RD1_RS10090 PF03480 Bacterial extracellular solute-binding protein, family 7 RD1_RS10095 PF04290 RD1_RS10095 RD1_RS10100 PF06808 RD1_RS10100 RD1_RS10105 PF13714 Phosphoenolpyruvate phosphomutase RD1_RS10110 PF00724 NADH:flavin oxidoreductase / NADH oxidase family RD1_RS10110 PF13450 NAD(P)-binding Rossmann-like domain RD1_RS10115 PF00732 GMC oxidoreductase RD1_RS10115 PF05199 GMC oxidoreductase RD1_RS10125 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily RD1_RS10130 PF13467 Ribbon-helix-helix domain RD1_RS10135 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RD1_RS10135 PF03466 LysR substrate binding domain RD1_RS10140 PF00141 Peroxidase RD1_RS10145 PF00582 Universal stress protein family RD1_RS10150 PF02558 Ketopantoate reductase PanE/ApbA RD1_RS10150 PF08546 Ketopantoate reductase PanE/ApbA C terminal RD1_RS10155 PF00501 AMP-binding enzyme RD1_RS10155 PF13193 AMP-binding enzyme C-terminal domain RD1_RS10160 PF01970 RD1_RS10160 RD1_RS10165 PF07331 RD1_RS10165 RD1_RS10170 PF03401 Tripartite tricarboxylate transporter family receptor RD1_RS10175 PF01381 Helix-turn-helix RD1_RS10175 PF06114 Domain of unknown function (DUF955) RD1_RS10175 PF09856 RD1_RS10175 RD1_RS10180 PF03971 Monomeric isocitrate dehydrogenase RD1_RS10190 PF16576 RD1_RS10190 RD1_RS10195 PF00440 Bacterial regulatory proteins, tetR family RD1_RS10195 PF13305 WHG domain RD1_RS10200 PF00459 Inositol monophosphatase family RD1_RS10205 PF13238 AAA domain RD1_RS10210 PF00005 ABC transporter RD1_RS10215 PF02653 RD1_RS10215 RD1_RS10220 PF13407 Periplasmic binding protein domain RD1_RS10225 PF00480 ROK family RD1_RS10225 PF13412 Winged helix-turn-helix DNA-binding RD1_RS10230 PF06035 Bacterial transglutaminase-like cysteine proteinase BTLCP RD1_RS10240 PF00563 EAL domain RD1_RS10240 PF00990 GGDEF domain RD1_RS10240 PF01590 GAF domain RD1_RS10250 PF00005 ABC transporter RD1_RS10250 PF08352 Oligopeptide/dipeptide transporter, C-terminal region RD1_RS10255 PF00005 ABC transporter RD1_RS10255 PF08352 Oligopeptide/dipeptide transporter, C-terminal region RD1_RS10260 PF00528 Binding-protein-dependent transport system inner membrane component RD1_RS10260 PF12911 RD1_RS10260 RD1_RS10265 PF00528 Binding-protein-dependent transport system inner membrane component RD1_RS10270 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle RD1_RS10275 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle RD1_RS10285 PF00589 Phage integrase family RD1_RS10285 PF13356 Domain of unknown function (DUF4102) RD1_RS10300 PF00589 Phage integrase family RD1_RS10305 PF02384 N-6 DNA Methylase RD1_RS10305 PF12161 HsdM N-terminal domain RD1_RS10310 PF01420 Type I restriction modification DNA specificity domain RD1_RS10315 PF00271 Helicase conserved C-terminal domain RD1_RS10315 PF04851 Type III restriction enzyme, res subunit RD1_RS10315 PF08463 RD1_RS10315 RD1_RS10320 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) RD1_RS10325 PF13450 NAD(P)-binding Rossmann-like domain RD1_RS10330 PF00005 ABC transporter RD1_RS10335 PF02687 RD1_RS10335 RD1_RS10340 PF07143 Hydroxyneurosporene synthase (CrtC) RD1_RS10340 PF17186 RD1_RS10340 RD1_RS10345 PF00441 Acyl-CoA dehydrogenase, C-terminal domain RD1_RS10345 PF02770 Acyl-CoA dehydrogenase, middle domain RD1_RS10345 PF02771 Acyl-CoA dehydrogenase, N-terminal domain RD1_RS10350 PF00072 Response regulator receiver domain RD1_RS10350 PF01339 CheB methylesterase RD1_RS10355 PF03975 CheD chemotactic sensory transduction RD1_RS10360 PF13276 RD1_RS10360 RD1_RS10360 PF13683 RD1_RS10360 RD1_RS10380 PF00753 Metallo-beta-lactamase superfamily RD1_RS10385 PF00512 His Kinase A (phospho-acceptor) domain RD1_RS10385 PF00672 HAMP domain RD1_RS10385 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RD1_RS10395 PF00586 AIR synthase related protein, N-terminal domain RD1_RS10395 PF02769 AIR synthase related protein, C-terminal domain RD1_RS10400 PF00551 Formyl transferase RD1_RS10405 PF00570 HRDC domain RD1_RS10405 PF01612 3'-5' exonuclease RD1_RS10415 PF02657 Fe-S metabolism associated domain RD1_RS10420 PF07796 RD1_RS10420 RD1_RS10425 PF02310 B12 binding domain RD1_RS10425 PF02607 B12 binding domain RD1_RS10430 PF02574 Homocysteine S-methyltransferase RD1_RS10435 PF07345 Domain of unknown function (DUF1476) RD1_RS10440 PF01259 SAICAR synthetase RD1_RS10445 PF02700 Phosphoribosylformylglycinamidine (FGAM) synthase RD1_RS10450 PF13507 CobB/CobQ-like glutamine amidotransferase domain RD1_RS10455 PF00512 His Kinase A (phospho-acceptor) domain RD1_RS10455 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RD1_RS10460 PF00072 Response regulator receiver domain RD1_RS10460 PF00158 Sigma-54 interaction domain RD1_RS10460 PF02954 Bacterial regulatory protein, Fis family RD1_RS10465 PF00575 S1 RNA binding domain RD1_RS10465 PF10150 Ribonuclease E/G family RD1_RS10470 PF01206 Sulfurtransferase TusA RD1_RS10475 PF02683 RD1_RS10475 RD1_RS10480 PF00274 Fructose-bisphosphate aldolase class-I RD1_RS10485 PF13467 Ribbon-helix-helix domain RD1_RS10490 PF13770 RD1_RS10490 RD1_RS10495 PF00206 Lyase RD1_RS10495 PF10415 Fumarase C C-terminus RD1_RS10510 PF02417 RD1_RS10510 RD1_RS10515 PF07366 SnoaL-like polyketide cyclase RD1_RS10520 PF14248 RD1_RS10520 RD1_RS10530 PF00392 Bacterial regulatory proteins, gntR family RD1_RS10530 PF07729 FCD domain RD1_RS10535 PF09948 RD1_RS10535 RD1_RS10540 PF07040 RD1_RS10540 RD1_RS10545 PF05163 DinB family RD1_RS10550 PF01571 Aminomethyltransferase folate-binding domain RD1_RS10550 PF08669 Glycine cleavage T-protein C-terminal barrel domain RD1_RS10555 PF00107 Zinc-binding dehydrogenase RD1_RS10560 PF02028 BCCT family transporter RD1_RS10565 PF02028 BCCT family transporter RD1_RS10570 PF00266 Aminotransferase class-V RD1_RS10575 PF00875 DNA photolyase RD1_RS10575 PF03441 FAD binding domain of DNA photolyase RD1_RS10580 PF02353 Mycolic acid cyclopropane synthetase RD1_RS10590 PF00293 NUDIX domain RD1_RS10595 PF00291 Pyridoxal-phosphate dependent enzyme RD1_RS10600 PF00924 Mechanosensitive ion channel RD1_RS10600 PF12607 RD1_RS10600 RD1_RS10610 PF13442 Cytochrome C oxidase, cbb3-type, subunit III RD1_RS10615 PF00122 E1-E2 ATPase RD1_RS10615 PF00403 Heavy-metal-associated domain RD1_RS10615 PF00702 haloacid dehalogenase-like hydrolase RD1_RS10620 PF00376 MerR family regulatory protein RD1_RS10620 PF09278 MerR, DNA binding RD1_RS10625 PF00394 Multicopper oxidase RD1_RS10625 PF07731 Multicopper oxidase RD1_RS10625 PF07732 Multicopper oxidase RD1_RS10630 PF04214 RD1_RS10630 RD1_RS10635 PF01408 Oxidoreductase family, NAD-binding Rossmann fold RD1_RS10635 PF02894 Oxidoreductase family, C-terminal alpha/beta domain RD1_RS10640 PF00392 Bacterial regulatory proteins, gntR family RD1_RS10640 PF07702 UTRA domain RD1_RS10645 PF00296 Luciferase-like monooxygenase RD1_RS10650 PF00248 Aldo/keto reductase family RD1_RS10655 PF01613 Flavin reductase like domain RD1_RS10660 PF04290 RD1_RS10660 RD1_RS10665 PF06808 RD1_RS10665 RD1_RS10670 PF03480 Bacterial extracellular solute-binding protein, family 7 RD1_RS10675 PF08238 Sel1 repeat RD1_RS10680 PF03150 Di-haem cytochrome c peroxidase RD1_RS10685 PF00232 Glycosyl hydrolase family 1 RD1_RS10690 PF00356 Bacterial regulatory proteins, lacI family RD1_RS10690 PF13377 Periplasmic binding protein-like domain RD1_RS10695 PF01547 Bacterial extracellular solute-binding protein RD1_RS10700 PF00528 Binding-protein-dependent transport system inner membrane component RD1_RS10710 PF00128 Alpha amylase, catalytic domain RD1_RS10710 PF11941 Domain of unknown function (DUF3459) RD1_RS10715 PF00005 ABC transporter RD1_RS10720 PF11750 RD1_RS10720 RD1_RS10725 PF01103 Surface antigen RD1_RS10730 PF04357 RD1_RS10730 RD1_RS10735 PF01613 Flavin reductase like domain RD1_RS10740 PF00501 AMP-binding enzyme RD1_RS10740 PF13193 AMP-binding enzyme C-terminal domain RD1_RS10740 PF16177 RD1_RS10740 RD1_RS10745 PF03480 Bacterial extracellular solute-binding protein, family 7 RD1_RS10750 PF04290 RD1_RS10750 RD1_RS10755 PF06808 RD1_RS10755 RD1_RS10760 PF01494 FAD binding domain RD1_RS10765 PF00202 Aminotransferase class-III RD1_RS10770 PF13561 Enoyl-(Acyl carrier protein) reductase RD1_RS10780 PF00583 Acetyltransferase (GNAT) family RD1_RS10785 PF00534 Glycosyl transferases group 1 RD1_RS10785 PF13439 Glycosyltransferase Family 4 RD1_RS10790 PF00528 Binding-protein-dependent transport system inner membrane component RD1_RS10795 PF00005 ABC transporter RD1_RS10800 PF09084 NMT1/THI5 like RD1_RS10805 PF03706 RD1_RS10805 RD1_RS10810 PF00884 Sulfatase RD1_RS10815 PF01066 CDP-alcohol phosphatidyltransferase RD1_RS10820 PF04264 YceI-like domain RD1_RS10825 PF13229 Right handed beta helix region RD1_RS10830 PF00685 Sulfotransferase domain RD1_RS10835 PF00462 Glutaredoxin RD1_RS10840 PF04224 RD1_RS10840 RD1_RS10845 PF00440 Bacterial regulatory proteins, tetR family RD1_RS10850 PF09411 Lipid A 3-O-deacylase (PagL) RD1_RS10855 PF00027 Cyclic nucleotide-binding domain RD1_RS10855 PF00924 Mechanosensitive ion channel RD1_RS10860 PF01047 MarR family RD1_RS10865 PF00355 Rieske [2Fe-2S] domain RD1_RS10870 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region RD1_RS10875 PF01522 Polysaccharide deacetylase RD1_RS10880 PF00005 ABC transporter RD1_RS10880 PF08402 TOBE domain RD1_RS10885 PF00528 Binding-protein-dependent transport system inner membrane component RD1_RS10890 PF00528 Binding-protein-dependent transport system inner membrane component RD1_RS10895 PF13416 Bacterial extracellular solute-binding protein RD1_RS10900 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RD1_RS10900 PF03466 LysR substrate binding domain RD1_RS10905 PF00156 Phosphoribosyl transferase domain RD1_RS10910 PF03437 BtpA family RD1_RS10915 PF09948 RD1_RS10915 RD1_RS10920 PF00111 2Fe-2S iron-sulfur cluster binding domain RD1_RS10925 PF05694 56kDa selenium binding protein (SBP56) RD1_RS10930 PF01614 Bacterial transcriptional regulator RD1_RS10930 PF09339 IclR helix-turn-helix domain RD1_RS10935 PF13407 Periplasmic binding protein domain RD1_RS10940 PF02653 RD1_RS10940 RD1_RS10945 PF00005 ABC transporter RD1_RS10950 PF01636 Phosphotransferase enzyme family RD1_RS10955 PF01008 Initiation factor 2 subunit family RD1_RS10960 PF04198 Putative sugar-binding domain RD1_RS10975 PF00625 Guanylate kinase RD1_RS10980 PF00005 ABC transporter RD1_RS10985 PF00005 ABC transporter RD1_RS10990 PF06007 RD1_RS10990 RD1_RS10995 PF05861 RD1_RS10995 RD1_RS11000 PF05845 Bacterial phosphonate metabolism protein (PhnH) RD1_RS11005 PF06754 RD1_RS11005 RD1_RS11010 PF00392 Bacterial regulatory proteins, gntR family RD1_RS11010 PF07702 UTRA domain RD1_RS11015 PF01451 Low molecular weight phosphotyrosine protein phosphatase RD1_RS11015 PF12840 Helix-turn-helix domain RD1_RS11020 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain RD1_RS11020 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain RD1_RS11030 PF00132 Bacterial transferase hexapeptide (six repeats) RD1_RS11035 PF00528 Binding-protein-dependent transport system inner membrane component RD1_RS11040 PF12974 ABC transporter, phosphonate, periplasmic substrate-binding protein RD1_RS11045 PF00005 ABC transporter RD1_RS11050 PF01979 Amidohydrolase family RD1_RS11055 PF01177 Asp/Glu/Hydantoin racemase RD1_RS11060 PF01425 Amidase RD1_RS11065 PF00528 Binding-protein-dependent transport system inner membrane component RD1_RS11070 PF00528 Binding-protein-dependent transport system inner membrane component RD1_RS11075 PF00005 ABC transporter RD1_RS11075 PF08402 TOBE domain RD1_RS11080 PF13343 Bacterial extracellular solute-binding protein RD1_RS11085 PF00392 Bacterial regulatory proteins, gntR family RD1_RS11085 PF07729 FCD domain RD1_RS11090 PF00528 Binding-protein-dependent transport system inner membrane component RD1_RS11095 PF00528 Binding-protein-dependent transport system inner membrane component RD1_RS11100 PF00005 ABC transporter RD1_RS11100 PF08402 TOBE domain RD1_RS11105 PF13343 Bacterial extracellular solute-binding protein RD1_RS11110 PF00455 RD1_RS11110 RD1_RS11110 PF08220 DeoR-like helix-turn-helix domain RD1_RS11115 PF01380 SIS domain RD1_RS11120 PF00294 pfkB family carbohydrate kinase RD1_RS11125 PF03437 BtpA family RD1_RS11130 PF01522 Polysaccharide deacetylase RD1_RS11135 PF01522 Polysaccharide deacetylase RD1_RS11145 PF01979 Amidohydrolase family RD1_RS11150 PF00005 ABC transporter RD1_RS11155 PF13416 Bacterial extracellular solute-binding protein RD1_RS11160 PF00528 Binding-protein-dependent transport system inner membrane component RD1_RS11165 PF00528 Binding-protein-dependent transport system inner membrane component RD1_RS11170 PF01522 Polysaccharide deacetylase RD1_RS11175 PF01436 NHL repeat RD1_RS11180 PF13443 Cro/C1-type HTH DNA-binding domain RD1_RS11195 PF02627 Carboxymuconolactone decarboxylase family RD1_RS11200 PF00027 Cyclic nucleotide-binding domain RD1_RS11200 PF13545 Crp-like helix-turn-helix domain RD1_RS11205 PF00582 Universal stress protein family RD1_RS11210 PF07690 Major Facilitator Superfamily RD1_RS11215 PF07690 Major Facilitator Superfamily RD1_RS11220 PF00384 Molybdopterin oxidoreductase RD1_RS11220 PF01568 Molydopterin dinucleotide binding domain RD1_RS11220 PF14710 Respiratory nitrate reductase alpha N-terminal RD1_RS11225 PF13247 4Fe-4S dicluster domain RD1_RS11225 PF14711 Respiratory nitrate reductase beta C-terminal RD1_RS11230 PF02613 Nitrate reductase delta subunit RD1_RS11235 PF02665 Nitrate reductase gamma subunit RD1_RS11240 PF00639 PPIC-type PPIASE domain RD1_RS11245 PF01814 Hemerythrin HHE cation binding domain RD1_RS11250 PF01814 Hemerythrin HHE cation binding domain RD1_RS11255 PF00994 Probable molybdopterin binding domain RD1_RS11255 PF03453 MoeA N-terminal region (domain I and II) RD1_RS11255 PF03454 MoeA C-terminal region (domain IV) RD1_RS11260 PF10649 RD1_RS11260 RD1_RS11265 PF00205 Thiamine pyrophosphate enzyme, central domain RD1_RS11265 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain RD1_RS11265 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain RD1_RS11270 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase RD1_RS11270 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain RD1_RS11275 PF00027 Cyclic nucleotide-binding domain RD1_RS11275 PF13545 Crp-like helix-turn-helix domain RD1_RS11280 PF02308 RD1_RS11280 RD1_RS11285 PF00924 Mechanosensitive ion channel RD1_RS11285 PF05552 Conserved TM helix RD1_RS11290 PF06055 RD1_RS11290 RD1_RS11300 PF05239 PRC-barrel domain RD1_RS11305 PF09537 Domain of unknown function (DUF2383) RD1_RS11310 PF07568 RD1_RS11310 RD1_RS11315 PF04542 Sigma-70 region 2 RD1_RS11315 PF08281 Sigma-70, region 4 RD1_RS11325 PF00072 Response regulator receiver domain RD1_RS11325 PF08281 Sigma-70, region 4 RD1_RS11330 PF02080 TrkA-C domain RD1_RS11330 PF02254 TrkA-N domain RD1_RS11335 PF02386 Cation transport protein RD1_RS11340 PF01226 Formate/nitrite transporter RD1_RS11345 PF11160 RD1_RS11345 RD1_RS11350 PF07498 Rho termination factor, N-terminal domain RD1_RS11355 PF01554 MatE RD1_RS11365 PF13430 RD1_RS11365 RD1_RS11375 PF13396 RD1_RS11375 RD1_RS11380 PF01594 RD1_RS11380 RD1_RS11385 PF00614 Phospholipase D Active site motif RD1_RS11385 PF13091 PLD-like domain RD1_RS11395 PF07332 RD1_RS11395 RD1_RS11400 PF12277 RD1_RS11400 RD1_RS11420 PF00589 Phage integrase family RD1_RS11425 PF13020 RD1_RS11425 RD1_RS11430 PF00580 UvrD/REP helicase N-terminal domain RD1_RS11430 PF01396 RD1_RS11430 RD1_RS11430 PF13361 UvrD-like helicase C-terminal domain RD1_RS11435 PF00665 Integrase core domain RD1_RS11440 PF01527 Transposase RD1_RS11445 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) RD1_RS11450 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) RD1_RS11455 PF01839 FG-GAP repeat RD1_RS11470 PF00440 Bacterial regulatory proteins, tetR family RD1_RS11485 PF00440 Bacterial regulatory proteins, tetR family RD1_RS11490 PF02635 DsrE/DsrF-like family RD1_RS11495 PF01243 Pyridoxamine 5'-phosphate oxidase RD1_RS11500 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RD1_RS11500 PF03466 LysR substrate binding domain RD1_RS11505 PF07992 Pyridine nucleotide-disulphide oxidoreductase RD1_RS11510 PF00106 short chain dehydrogenase RD1_RS11520 PF01207 Dihydrouridine synthase (Dus) RD1_RS11530 PF00459 Inositol monophosphatase family RD1_RS11535 PF01694 Rhomboid family RD1_RS11540 PF00171 Aldehyde dehydrogenase family RD1_RS11540 PF01619 Proline dehydrogenase RD1_RS11540 PF14850 DNA-binding domain of Proline dehydrogenase RD1_RS11545 PF01037 AsnC family RD1_RS11545 PF13412 Winged helix-turn-helix DNA-binding RD1_RS11550 PF14559 Tetratricopeptide repeat RD1_RS11560 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain RD1_RS11560 PF00672 HAMP domain RD1_RS11560 PF08448 PAS fold RD1_RS11575 PF09334 tRNA synthetases class I (M) RD1_RS11580 PF07690 Major Facilitator Superfamily RD1_RS11585 PF04264 YceI-like domain RD1_RS11595 PF00248 Aldo/keto reductase family RD1_RS11600 PF05853 Prokaryotic protein of unknown function (DUF849) RD1_RS11610 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain RD1_RS11610 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain RD1_RS11610 PF13279 Thioesterase-like superfamily RD1_RS11615 PF00892 EamA-like transporter family RD1_RS11620 PF00293 NUDIX domain RD1_RS11625 PF06170 RD1_RS11625 RD1_RS11630 PF00072 Response regulator receiver domain RD1_RS11630 PF00990 GGDEF domain RD1_RS11635 PF12096 RD1_RS11635 RD1_RS11640 PF13419 Haloacid dehalogenase-like hydrolase RD1_RS11645 PF06253 Trimethylamine methyltransferase (MTTB) RD1_RS11650 PF07700 Heme NO binding RD1_RS11655 PF00990 GGDEF domain RD1_RS11660 PF00873 AcrB/AcrD/AcrF family RD1_RS11665 PF16576 RD1_RS11665 RD1_RS11680 PF01368 DHH family RD1_RS11680 PF02272 DHHA1 domain RD1_RS11685 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded RD1_RS11690 PF00742 Homoserine dehydrogenase RD1_RS11690 PF01842 ACT domain RD1_RS11690 PF03447 Homoserine dehydrogenase, NAD binding domain RD1_RS11700 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase RD1_RS11700 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase RD1_RS11705 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) RD1_RS11705 PF02403 Seryl-tRNA synthetase N-terminal domain RD1_RS11710 PF00089 Trypsin RD1_RS11715 PF02699 Preprotein translocase subunit RD1_RS11720 PF02355 Protein export membrane protein RD1_RS11725 PF02355 Protein export membrane protein RD1_RS11725 PF07549 SecD/SecF GG Motif RD1_RS11730 PF04430 Protein of unknown function (DUF498/DUF598) RD1_RS11735 PF00005 ABC transporter RD1_RS11740 PF03379 RD1_RS11740 RD1_RS11745 PF01578 RD1_RS11745 RD1_RS11750 PF04995 RD1_RS11750 RD1_RS11755 PF08534 Redoxin RD1_RS11760 PF00005 ABC transporter RD1_RS11775 PF00330 Aconitase family (aconitate hydratase) RD1_RS11775 PF00694 Aconitase C-terminal domain RD1_RS11780 PF06764 Protein of unknown function (DUF1223) RD1_RS11785 PF03279 RD1_RS11785 RD1_RS11790 PF01706 FliG C-terminal domain RD1_RS11790 PF14841 FliG middle domain RD1_RS11790 PF14842 FliG N-terminal domain RD1_RS11795 PF00206 Lyase RD1_RS11795 PF10397 Adenylosuccinate lyase C-terminus RD1_RS11805 PF02632 BioY family RD1_RS11815 PF02566 OsmC-like protein RD1_RS11815 PF12146 Putative lysophospholipase RD1_RS11830 PF00557 Metallopeptidase family M24 RD1_RS11840 PF00120 Glutamine synthetase, catalytic domain RD1_RS11840 PF03951 Glutamine synthetase, beta-Grasp domain RD1_RS11845 PF00543 Nitrogen regulatory protein P-II RD1_RS11850 PF03853 YjeF-related protein N-terminus RD1_RS11855 PF01256 Carbohydrate kinase RD1_RS11860 PF13403 Hint domain RD1_RS11870 PF00436 Single-strand binding protein family RD1_RS11875 PF01464 Transglycosylase SLT domain RD1_RS11880 PF00005 ABC transporter RD1_RS11880 PF08352 Oligopeptide/dipeptide transporter, C-terminal region RD1_RS11885 PF00528 Binding-protein-dependent transport system inner membrane component RD1_RS11890 PF00528 Binding-protein-dependent transport system inner membrane component RD1_RS11895 PF12833 Helix-turn-helix domain RD1_RS11900 PF01715 IPP transferase RD1_RS11905 PF00696 Amino acid kinase family RD1_RS11910 PF01765 Ribosome recycling factor RD1_RS11915 PF01255 Putative undecaprenyl diphosphate synthase RD1_RS11920 PF01148 Cytidylyltransferase family RD1_RS11925 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase RD1_RS11925 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal RD1_RS11925 PF13288 DXP reductoisomerase C-terminal domain RD1_RS11930 PF02163 Peptidase family M50 RD1_RS11930 PF13180 PDZ domain RD1_RS11935 PF01103 Surface antigen RD1_RS11935 PF07244 Surface antigen variable number repeat RD1_RS11940 PF03938 Outer membrane protein (OmpH-like) RD1_RS11945 PF07977 FabA-like domain RD1_RS11950 PF00132 Bacterial transferase hexapeptide (six repeats) RD1_RS11950 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 RD1_RS11955 PF06230 Protein of unknown function (DUF1009) RD1_RS11960 PF02684 RD1_RS11960 RD1_RS11965 PF03054 tRNA methyl transferase RD1_RS11970 PF06627 Protein of unknown function (DUF1153) RD1_RS11975 PF00072 Response regulator receiver domain RD1_RS11975 PF00486 Transcriptional regulatory protein, C terminal RD1_RS11980 PF00533 BRCA1 C Terminus (BRCT) domain RD1_RS11980 PF01653 NAD-dependent DNA ligase adenylation domain RD1_RS11980 PF03119 NAD-dependent DNA ligase C4 zinc finger domain RD1_RS11980 PF03120 NAD-dependent DNA ligase OB-fold domain RD1_RS11980 PF12826 Helix-hairpin-helix motif RD1_RS11985 PF00270 DEAD/DEAH box helicase RD1_RS11985 PF00271 Helicase conserved C-terminal domain RD1_RS11985 PF17191 RD1_RS11985 RD1_RS11995 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain RD1_RS12005 PF01502 Phosphoribosyl-AMP cyclohydrolase RD1_RS12010 PF00749 tRNA synthetases class I (E and Q), catalytic domain RD1_RS12015 PF13489 Methyltransferase domain RD1_RS12020 PF01134 Glucose inhibited division protein A RD1_RS12025 PF03061 Thioesterase superfamily RD1_RS12030 PF00380 Ribosomal protein S9/S16 RD1_RS12035 PF00572 Ribosomal protein L13 RD1_RS12040 PF13400 RD1_RS12040 RD1_RS12045 PF07811 RD1_RS12045 RD1_RS12055 PF05951 RD1_RS12055 RD1_RS12060 PF01471 Putative peptidoglycan binding domain RD1_RS12060 PF03734 L,D-transpeptidase catalytic domain RD1_RS12065 PF00132 Bacterial transferase hexapeptide (six repeats) RD1_RS12065 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD RD1_RS12070 PF00550 Phosphopantetheine attachment site RD1_RS12075 PF00109 Beta-ketoacyl synthase, N-terminal domain RD1_RS12075 PF02801 Beta-ketoacyl synthase, C-terminal domain RD1_RS12080 PF06776 Invasion associated locus B (IalB) protein RD1_RS12085 PF05872 RD1_RS12085 RD1_RS12090 PF02653 RD1_RS12090 RD1_RS12095 PF02653 RD1_RS12095 RD1_RS12100 PF00005 ABC transporter RD1_RS12105 PF00005 ABC transporter RD1_RS12105 PF12399 Branched-chain amino acid ATP-binding cassette transporter RD1_RS12110 PF13458 Periplasmic binding protein RD1_RS12115 PF07995 Glucose / Sorbosone dehydrogenase RD1_RS12120 PF01965 DJ-1/PfpI family RD1_RS12120 PF12833 Helix-turn-helix domain RD1_RS12125 PF01474 Class-II DAHP synthetase family RD1_RS12130 PF07310 RD1_RS12130 RD1_RS12135 PF03755 RD1_RS12135 RD1_RS12135 PF08340 RD1_RS12135 RD1_RS12140 PF00625 Guanylate kinase RD1_RS12145 PF00132 Bacterial transferase hexapeptide (six repeats) RD1_RS12150 PF01053 Cys/Met metabolism PLP-dependent enzyme RD1_RS12155 PF00512 His Kinase A (phospho-acceptor) domain RD1_RS12155 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RD1_RS12160 PF12849 PBP superfamily domain RD1_RS12165 PF00528 Binding-protein-dependent transport system inner membrane component RD1_RS12165 PF12501 RD1_RS12165 RD1_RS12170 PF00528 Binding-protein-dependent transport system inner membrane component RD1_RS12170 PF11812 RD1_RS12170 RD1_RS12175 PF00005 ABC transporter RD1_RS12180 PF01895 PhoU domain RD1_RS12185 PF00072 Response regulator receiver domain RD1_RS12185 PF00486 Transcriptional regulatory protein, C terminal RD1_RS12190 PF05853 Prokaryotic protein of unknown function (DUF849) RD1_RS12195 PF00665 Integrase core domain RD1_RS12195 PF13936 Helix-turn-helix domain RD1_RS12200 PF01220 Dehydroquinase class II RD1_RS12205 PF00889 Elongation factor TS RD1_RS12210 PF00318 Ribosomal protein S2 RD1_RS12215 PF07691 PA14 domain RD1_RS12220 PF01553 Acyltransferase RD1_RS12225 PF13444 Acetyltransferase (GNAT) domain RD1_RS12230 PF10090 Uncharacterized protein conserved in bacteria (DUF2328) RD1_RS12235 PF00171 Aldehyde dehydrogenase family RD1_RS12240 PF00696 Amino acid kinase family RD1_RS12240 PF01472 PUA domain RD1_RS12245 PF01018 GTP1/OBG RD1_RS12245 PF01926 50S ribosome-binding GTPase RD1_RS12250 PF13302 Acetyltransferase (GNAT) domain RD1_RS12255 PF01810 RD1_RS12255 RD1_RS12260 PF01016 Ribosomal L27 protein RD1_RS12265 PF00829 Ribosomal prokaryotic L21 protein RD1_RS12270 PF09832 Uncharacterized protein conserved in bacteria (DUF2059) RD1_RS12275 PF09832 Uncharacterized protein conserved in bacteria (DUF2059) RD1_RS12290 PF00892 EamA-like transporter family RD1_RS12295 PF00210 Ferritin-like domain RD1_RS12300 PF01497 Periplasmic binding protein RD1_RS12305 PF01032 FecCD transport family RD1_RS12310 PF00005 ABC transporter RD1_RS12315 PF00127 Copper binding proteins, plastocyanin/azurin family RD1_RS12320 PF00561 alpha/beta hydrolase fold RD1_RS12320 PF08386 TAP-like protein RD1_RS12330 PF00939 Sodium:sulfate symporter transmembrane region RD1_RS12340 PF12804 MobA-like NTP transferase domain RD1_RS12345 PF04960 Glutaminase RD1_RS12350 PF00282 Pyridoxal-dependent decarboxylase conserved domain RD1_RS12360 PF00211 Adenylate and Guanylate cyclase catalytic domain RD1_RS12370 PF00266 Aminotransferase class-V RD1_RS12375 PF04893 RD1_RS12375 RD1_RS12385 PF01458 Uncharacterized protein family (UPF0051) RD1_RS12390 PF00005 ABC transporter RD1_RS12395 PF01906 Putative heavy-metal-binding RD1_RS12400 PF01458 Uncharacterized protein family (UPF0051) RD1_RS12405 PF00266 Aminotransferase class-V RD1_RS12410 PF02082 Transcriptional regulator RD1_RS12415 PF02129 X-Pro dipeptidyl-peptidase (S15 family) RD1_RS12425 PF13023 HD domain RD1_RS12430 PF00180 Isocitrate/isopropylmalate dehydrogenase RD1_RS12435 PF00893 Small Multidrug Resistance protein RD1_RS12440 PF00009 Elongation factor Tu GTP binding domain RD1_RS12440 PF00679 Elongation factor G C-terminus RD1_RS12440 PF03144 Elongation factor Tu domain 2 RD1_RS12445 PF07045 Protein of unknown function (DUF1330) RD1_RS12450 PF01411 tRNA synthetases class II (A) RD1_RS12450 PF02272 DHHA1 domain RD1_RS12450 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain RD1_RS12455 PF00154 recA bacterial DNA recombination protein RD1_RS12460 PF00072 Response regulator receiver domain RD1_RS12460 PF00512 His Kinase A (phospho-acceptor) domain RD1_RS12460 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RD1_RS12465 PF01189 NOL1/NOP2/sun family RD1_RS12470 PF00478 IMP dehydrogenase / GMP reductase domain RD1_RS12470 PF00571 CBS domain RD1_RS12475 PF00491 Arginase family RD1_RS12480 PF14574 Domain of unknown function (DUF4445) RD1_RS12490 PF03061 Thioesterase superfamily RD1_RS12495 PF00342 Phosphoglucose isomerase RD1_RS12500 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase RD1_RS12505 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain RD1_RS12505 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain RD1_RS12510 PF04055 Radical SAM superfamily RD1_RS12510 PF13394 4Fe-4S single cluster domain RD1_RS12515 PF06233 RD1_RS12515 RD1_RS12520 PF00521 DNA gyrase/topoisomerase IV, subunit A RD1_RS12520 PF03989 DNA gyrase C-terminal domain, beta-propeller RD1_RS12525 PF02074 Carboxypeptidase Taq (M32) metallopeptidase RD1_RS12530 PF02628 RD1_RS12530 RD1_RS12535 PF00588 SpoU rRNA Methylase family RD1_RS12540 PF02581 Thiamine monophosphate synthase/TENI RD1_RS12545 PF13795 RD1_RS12545 RD1_RS12550 PF10670 RD1_RS12550 RD1_RS12555 PF00294 pfkB family carbohydrate kinase RD1_RS12560 PF04227 Indigoidine synthase A like protein RD1_RS12565 PF04367 RD1_RS12565 RD1_RS12570 PF01734 Patatin-like phospholipase RD1_RS12575 PF13561 Enoyl-(Acyl carrier protein) reductase RD1_RS12580 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle RD1_RS12585 PF01381 Helix-turn-helix RD1_RS12585 PF07883 Cupin domain RD1_RS12590 PF00501 AMP-binding enzyme RD1_RS12590 PF13193 AMP-binding enzyme C-terminal domain RD1_RS12595 PF01323 DSBA-like thioredoxin domain RD1_RS12600 PF07690 Major Facilitator Superfamily RD1_RS12605 PF00270 DEAD/DEAH box helicase RD1_RS12605 PF00271 Helicase conserved C-terminal domain RD1_RS12605 PF02559 CarD-like/TRCF domain RD1_RS12605 PF03461 TRCF domain RD1_RS12615 PF00490 Delta-aminolevulinic acid dehydratase RD1_RS12620 PF04366 RD1_RS12620 RD1_RS12625 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase RD1_RS12625 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase RD1_RS12630 PF01804 Penicillin amidase RD1_RS12635 PF00849 RNA pseudouridylate synthase RD1_RS12640 PF01926 50S ribosome-binding GTPase RD1_RS12640 PF13167 RD1_RS12640 RD1_RS12640 PF16360 RD1_RS12640 RD1_RS12650 PF02386 Cation transport protein RD1_RS12655 PF02080 TrkA-C domain RD1_RS12655 PF02254 TrkA-N domain RD1_RS12665 PF12680 SnoaL-like domain RD1_RS12670 PF00072 Response regulator receiver domain RD1_RS12670 PF00158 Sigma-54 interaction domain RD1_RS12670 PF02954 Bacterial regulatory protein, Fis family RD1_RS12675 PF00512 His Kinase A (phospho-acceptor) domain RD1_RS12675 PF00672 HAMP domain RD1_RS12675 PF00989 PAS fold RD1_RS12675 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RD1_RS12680 PF00072 Response regulator receiver domain RD1_RS12680 PF02954 Bacterial regulatory protein, Fis family RD1_RS12680 PF14532 Sigma-54 interaction domain RD1_RS12685 PF00512 His Kinase A (phospho-acceptor) domain RD1_RS12685 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RD1_RS12685 PF08448 PAS fold RD1_RS12690 PF01207 Dihydrouridine synthase (Dus) RD1_RS12695 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase RD1_RS12700 PF02542 YgbB family RD1_RS12705 PF04608 Phosphatidylglycerophosphatase A RD1_RS12710 PF02464 Competence-damaged protein RD1_RS12715 PF03364 Polyketide cyclase / dehydrase and lipid transport RD1_RS12720 PF00156 Phosphoribosyl transferase domain RD1_RS12730 PF04055 Radical SAM superfamily RD1_RS12730 PF16881 RD1_RS12730 RD1_RS12750 PF06253 Trimethylamine methyltransferase (MTTB) RD1_RS12755 PF00117 Glutamine amidotransferase class-I RD1_RS12755 PF00958 GMP synthase C terminal domain RD1_RS12755 PF03054 tRNA methyl transferase RD1_RS12760 PF00892 EamA-like transporter family RD1_RS12770 PF00892 EamA-like transporter family RD1_RS12780 PF04204 Homoserine O-succinyltransferase RD1_RS12785 PF12697 Alpha/beta hydrolase family RD1_RS12790 PF03976 Polyphosphate kinase 2 (PPK2) RD1_RS12795 PF00440 Bacterial regulatory proteins, tetR family RD1_RS12795 PF13305 WHG domain RD1_RS12805 PF06055 RD1_RS12805 RD1_RS12810 PF02600 Disulfide bond formation protein DsbB RD1_RS12815 PF01494 FAD binding domain RD1_RS12820 PF01258 Prokaryotic dksA/traR C4-type zinc finger RD1_RS12825 PF00004 ATPase family associated with various cellular activities (AAA) RD1_RS12830 PF00583 Acetyltransferase (GNAT) family RD1_RS12835 PF11150 RD1_RS12835 RD1_RS12845 PF05762 VWA domain containing CoxE-like protein RD1_RS12850 PF01435 Peptidase family M48 RD1_RS12855 PF13470 RD1_RS12855 RD1_RS12860 PF10672 S-adenosylmethionine-dependent methyltransferase RD1_RS12870 PF03710 Glutamate-ammonia ligase adenylyltransferase RD1_RS12870 PF08335 GlnD PII-uridylyltransferase RD1_RS12875 PF11014 RD1_RS12875 RD1_RS12880 PF06271 RD1_RS12880 RD1_RS12885 PF04376 RD1_RS12885 RD1_RS12885 PF04377 RD1_RS12885 RD1_RS12890 PF06808 RD1_RS12890 RD1_RS12900 PF03480 Bacterial extracellular solute-binding protein, family 7 RD1_RS12905 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RD1_RS12905 PF07730 Histidine kinase RD1_RS12905 PF17200 RD1_RS12905 RD1_RS12910 PF00072 Response regulator receiver domain RD1_RS12910 PF00196 Bacterial regulatory proteins, luxR family RD1_RS12920 PF00205 Thiamine pyrophosphate enzyme, central domain RD1_RS12920 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain RD1_RS12920 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain RD1_RS12930 PF01842 ACT domain RD1_RS12930 PF10369 Small subunit of acetolactate synthase RD1_RS12940 PF13443 Cro/C1-type HTH DNA-binding domain RD1_RS12945 PF00355 Rieske [2Fe-2S] domain RD1_RS12945 PF00848 Ring hydroxylating alpha subunit (catalytic domain) RD1_RS12955 PF09955 RD1_RS12955 RD1_RS12960 PF00472 RF-1 domain RD1_RS12960 PF03462 PCRF domain RD1_RS12965 PF00905 Penicillin binding protein transpeptidase domain RD1_RS12965 PF00912 Transglycosylase RD1_RS12965 PF17092 RD1_RS12965 RD1_RS12970 PF01520 N-acetylmuramoyl-L-alanine amidase RD1_RS12970 PF11741 AMIN domain RD1_RS12975 PF00155 Aminotransferase class I and II RD1_RS12980 PF01435 Peptidase family M48 RD1_RS12980 PF14559 Tetratricopeptide repeat RD1_RS12985 PF01323 DSBA-like thioredoxin domain RD1_RS12990 PF04551 GcpE protein RD1_RS12995 PF13413 Helix-turn-helix domain RD1_RS12995 PF13464 RD1_RS12995 RD1_RS13000 PF00155 Aminotransferase class I and II RD1_RS13005 PF01546 Peptidase family M20/M25/M40 RD1_RS13005 PF07687 Peptidase dimerisation domain RD1_RS13010 PF00561 alpha/beta hydrolase fold RD1_RS13020 PF02678 Pirin RD1_RS13020 PF05726 Pirin C-terminal cupin domain RD1_RS13035 PF00300 Histidine phosphatase superfamily (branch 1) RD1_RS13040 PF10073 RD1_RS13040 RD1_RS13050 PF04273 Putative phosphatase (DUF442) RD1_RS13055 PF01052 Surface presentation of antigens (SPOA) RD1_RS13060 PF00512 His Kinase A (phospho-acceptor) domain RD1_RS13060 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RD1_RS13070 PF00072 Response regulator receiver domain RD1_RS13075 PF09856 RD1_RS13075 RD1_RS13075 PF12844 Helix-turn-helix domain RD1_RS13080 PF13458 Periplasmic binding protein RD1_RS13085 PF02653 RD1_RS13085 RD1_RS13090 PF02653 RD1_RS13090 RD1_RS13095 PF00005 ABC transporter RD1_RS13095 PF12399 Branched-chain amino acid ATP-binding cassette transporter RD1_RS13100 PF00005 ABC transporter RD1_RS13105 PF03807 NADP oxidoreductase coenzyme F420-dependent RD1_RS13110 PF00501 AMP-binding enzyme RD1_RS13110 PF13193 AMP-binding enzyme C-terminal domain RD1_RS13115 PF00364 Biotin-requiring enzyme RD1_RS13120 PF00289 Carbamoyl-phosphate synthase L chain, N-terminal domain RD1_RS13120 PF02785 Biotin carboxylase C-terminal domain RD1_RS13120 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain RD1_RS13125 PF03588 Leucyl/phenylalanyl-tRNA protein transferase RD1_RS13130 PF09923 RD1_RS13130 RD1_RS13135 PF02470 RD1_RS13135 RD1_RS13140 PF05071 RD1_RS13140 RD1_RS13145 PF01042 Endoribonuclease L-PSP RD1_RS13150 PF06689 ClpX C4-type zinc finger RD1_RS13150 PF07724 AAA domain (Cdc48 subfamily) RD1_RS13150 PF10431 C-terminal, D2-small domain, of ClpB protein RD1_RS13155 PF00574 Clp protease RD1_RS13160 PF03441 FAD binding domain of DNA photolyase RD1_RS13165 PF00005 ABC transporter RD1_RS13165 PF08402 TOBE domain RD1_RS13170 PF01614 Bacterial transcriptional regulator RD1_RS13170 PF09339 IclR helix-turn-helix domain RD1_RS13175 PF01547 Bacterial extracellular solute-binding protein RD1_RS13180 PF00528 Binding-protein-dependent transport system inner membrane component RD1_RS13185 PF00528 Binding-protein-dependent transport system inner membrane component RD1_RS13190 PF02065 Melibiase RD1_RS13190 PF16874 RD1_RS13190 RD1_RS13190 PF16875 RD1_RS13190 RD1_RS13195 PF13561 Enoyl-(Acyl carrier protein) reductase RD1_RS13200 PF05035 2-keto-3-deoxy-galactonokinase RD1_RS13205 PF01081 KDPG and KHG aldolase RD1_RS13210 PF02449 Beta-galactosidase RD1_RS13210 PF08532 Beta-galactosidase trimerisation domain RD1_RS13215 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain RD1_RS13215 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I RD1_RS13215 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II RD1_RS13215 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III RD1_RS13220 PF02446 4-alpha-glucanotransferase RD1_RS13225 PF00128 Alpha amylase, catalytic domain RD1_RS13225 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) RD1_RS13230 PF00534 Glycosyl transferases group 1 RD1_RS13230 PF08323 Starch synthase catalytic domain RD1_RS13235 PF00483 Nucleotidyl transferase RD1_RS13240 PF00128 Alpha amylase, catalytic domain RD1_RS13240 PF02806 Alpha amylase, C-terminal all-beta domain RD1_RS13240 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) RD1_RS13245 PF00343 Carbohydrate phosphorylase RD1_RS13250 PF00294 pfkB family carbohydrate kinase RD1_RS13255 PF01081 KDPG and KHG aldolase RD1_RS13260 PF00920 Dehydratase family RD1_RS13265 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain RD1_RS13265 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain RD1_RS13270 PF00465 Iron-containing alcohol dehydrogenase RD1_RS13275 PF00370 FGGY family of carbohydrate kinases, N-terminal domain RD1_RS13275 PF02782 FGGY family of carbohydrate kinases, C-terminal domain RD1_RS13280 PF01266 FAD dependent oxidoreductase RD1_RS13280 PF16901 RD1_RS13280 RD1_RS13285 PF00455 RD1_RS13285 RD1_RS13285 PF08220 DeoR-like helix-turn-helix domain RD1_RS13290 PF00350 Dynamin family RD1_RS13295 PF00350 Dynamin family RD1_RS13300 PF02423 Ornithine cyclodeaminase/mu-crystallin family RD1_RS13305 PF01168 Alanine racemase, N-terminal domain RD1_RS13305 PF14031 Putative serine dehydratase domain RD1_RS13310 PF00291 Pyridoxal-phosphate dependent enzyme RD1_RS13315 PF00266 Aminotransferase class-V RD1_RS13320 PF01614 Bacterial transcriptional regulator RD1_RS13320 PF09339 IclR helix-turn-helix domain RD1_RS13325 PF00392 Bacterial regulatory proteins, gntR family RD1_RS13325 PF07729 FCD domain RD1_RS13330 PF01292 Prokaryotic cytochrome b561 RD1_RS13335 PF00037 4Fe-4S binding domain RD1_RS13335 PF13247 4Fe-4S dicluster domain RD1_RS13340 PF00384 Molybdopterin oxidoreductase RD1_RS13340 PF01568 Molydopterin dinucleotide binding domain RD1_RS13340 PF04879 Molybdopterin oxidoreductase Fe4S4 domain RD1_RS13350 PF02613 Nitrate reductase delta subunit RD1_RS13355 PF11748 RD1_RS13355 RD1_RS13360 PF11749 RD1_RS13360 RD1_RS13365 PF12838 4Fe-4S dicluster domain RD1_RS13365 PF13187 4Fe-4S dicluster domain RD1_RS13380 PF01883 Domain of unknown function DUF59 RD1_RS13380 PF10609 ParA/MinD ATPase like RD1_RS13385 PF14563 Domain of unknown function (DUF4444) RD1_RS13385 PF16917 RD1_RS13385 RD1_RS13395 PF12849 PBP superfamily domain RD1_RS13400 PF00005 ABC transporter RD1_RS13405 PF00528 Binding-protein-dependent transport system inner membrane component RD1_RS13410 PF01925 RD1_RS13410 RD1_RS13415 PF13531 Bacterial extracellular solute-binding protein RD1_RS13420 PF00528 Binding-protein-dependent transport system inner membrane component RD1_RS13425 PF00005 ABC transporter RD1_RS13425 PF03459 TOBE domain RD1_RS13430 PF07385 Protein of unknown function (DUF1498) RD1_RS13435 PF00501 AMP-binding enzyme RD1_RS13435 PF13193 AMP-binding enzyme C-terminal domain RD1_RS13440 PF00171 Aldehyde dehydrogenase family RD1_RS13445 PF03401 Tripartite tricarboxylate transporter family receptor RD1_RS13450 PF07331 RD1_RS13450 RD1_RS13455 PF01970 RD1_RS13455 RD1_RS13460 PF00356 Bacterial regulatory proteins, lacI family RD1_RS13460 PF13377 Periplasmic binding protein-like domain RD1_RS13470 PF00676 Dehydrogenase E1 component RD1_RS13470 PF02779 Transketolase, pyrimidine binding domain RD1_RS13470 PF02780 Transketolase, C-terminal domain RD1_RS13475 PF00211 Adenylate and Guanylate cyclase catalytic domain RD1_RS13475 PF12773 RD1_RS13475 RD1_RS13475 PF13191 AAA ATPase domain RD1_RS13485 PF04069 Substrate binding domain of ABC-type glycine betaine transport system RD1_RS13490 PF00528 Binding-protein-dependent transport system inner membrane component RD1_RS13495 PF00005 ABC transporter RD1_RS13500 PF01232 Mannitol dehydrogenase Rossmann domain RD1_RS13500 PF08125 Mannitol dehydrogenase C-terminal domain RD1_RS13505 PF02614 Glucuronate isomerase RD1_RS13510 PF00528 Binding-protein-dependent transport system inner membrane component RD1_RS13515 PF00005 ABC transporter RD1_RS13520 PF00528 Binding-protein-dependent transport system inner membrane component RD1_RS13525 PF00528 Binding-protein-dependent transport system inner membrane component RD1_RS13530 PF13416 Bacterial extracellular solute-binding protein RD1_RS13535 PF00291 Pyridoxal-phosphate dependent enzyme RD1_RS13545 PF00512 His Kinase A (phospho-acceptor) domain RD1_RS13545 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RD1_RS13545 PF08521 RD1_RS13545 RD1_RS13550 PF00072 Response regulator receiver domain RD1_RS13550 PF00486 Transcriptional regulatory protein, C terminal RD1_RS13555 PF03401 Tripartite tricarboxylate transporter family receptor RD1_RS13560 PF07331 RD1_RS13560 RD1_RS13565 PF01970 RD1_RS13565 RD1_RS13570 PF00004 ATPase family associated with various cellular activities (AAA) RD1_RS13570 PF02190 ATP-dependent protease La (LON) domain RD1_RS13570 PF05362 Lon protease (S16) C-terminal proteolytic domain RD1_RS13575 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain RD1_RS13580 PF01702 Queuine tRNA-ribosyltransferase RD1_RS13590 PF01145 SPFH domain / Band 7 family RD1_RS13600 PF05618 Putative ATP-dependant zinc protease RD1_RS13600 PF08443 RimK-like ATP-grasp domain RD1_RS13605 PF01883 Domain of unknown function DUF59 RD1_RS13610 PF00132 Bacterial transferase hexapeptide (six repeats) RD1_RS13610 PF12464 Maltose acetyltransferase RD1_RS13615 PF01521 Iron-sulphur cluster biosynthesis RD1_RS13620 PF00121 Triosephosphate isomerase RD1_RS13625 PF00067 Cytochrome P450 RD1_RS13630 PF01037 AsnC family RD1_RS13630 PF13412 Winged helix-turn-helix DNA-binding RD1_RS13635 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases RD1_RS13635 PF10414 Sirohaem synthase dimerisation region RD1_RS13635 PF13241 Putative NAD(P)-binding RD1_RS13640 PF11011 RD1_RS13640 RD1_RS13645 PF01077 Nitrite and sulphite reductase 4Fe-4S domain RD1_RS13645 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain RD1_RS13650 PF01507 Phosphoadenosine phosphosulfate reductase family RD1_RS13655 PF06073 RD1_RS13655 RD1_RS13660 PF00175 Oxidoreductase NAD-binding domain RD1_RS13660 PF00970 Oxidoreductase FAD-binding domain RD1_RS13665 PF00707 Translation initiation factor IF-3, C-terminal domain RD1_RS13665 PF05198 Translation initiation factor IF-3, N-terminal domain RD1_RS13675 PF00941 FAD binding domain in molybdopterin dehydrogenase RD1_RS13680 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain RD1_RS13680 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase RD1_RS13685 PF00111 2Fe-2S iron-sulfur cluster binding domain RD1_RS13685 PF01799 [2Fe-2S] binding domain RD1_RS13695 PF02625 XdhC and CoxI family RD1_RS13695 PF13478 XdhC Rossmann domain RD1_RS13700 PF01722 BolA-like protein RD1_RS13710 PF00462 Glutaredoxin RD1_RS13715 PF05164 Cell division protein ZapA RD1_RS13725 PF00456 Transketolase, thiamine diphosphate binding domain RD1_RS13725 PF02779 Transketolase, pyrimidine binding domain RD1_RS13725 PF02780 Transketolase, C-terminal domain RD1_RS13730 PF05661 RD1_RS13730 RD1_RS13735 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain RD1_RS13735 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain RD1_RS13740 PF01467 Cytidylyltransferase RD1_RS13745 PF00571 CBS domain RD1_RS13750 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RD1_RS13750 PF03466 LysR substrate binding domain RD1_RS13755 PF00171 Aldehyde dehydrogenase family RD1_RS13760 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase RD1_RS13760 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase RD1_RS13760 PF16113 RD1_RS13760 RD1_RS13775 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain RD1_RS13775 PF07992 Pyridine nucleotide-disulphide oxidoreductase RD1_RS13780 PF06041 Bacterial protein of unknown function (DUF924) RD1_RS13785 PF07690 Major Facilitator Superfamily RD1_RS13790 PF02547 Queuosine biosynthesis protein RD1_RS13795 PF13116 RD1_RS13795 RD1_RS13795 PF13502 RD1_RS13795 RD1_RS13800 PF00578 AhpC/TSA family RD1_RS13805 PF04305 RD1_RS13805 RD1_RS13810 PF01551 Peptidase family M23 RD1_RS13815 PF04519 RD1_RS13815 RD1_RS13820 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD RD1_RS13825 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD RD1_RS13830 PF00162 Phosphoglycerate kinase RD1_RS13835 PF04977 Septum formation initiator RD1_RS13840 PF00676 Dehydrogenase E1 component RD1_RS13845 PF00364 Biotin-requiring enzyme RD1_RS13845 PF02779 Transketolase, pyrimidine binding domain RD1_RS13845 PF02780 Transketolase, C-terminal domain RD1_RS13850 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) RD1_RS13850 PF00364 Biotin-requiring enzyme RD1_RS13850 PF02817 e3 binding domain RD1_RS13855 PF00132 Bacterial transferase hexapeptide (six repeats) RD1_RS13855 PF06426 Serine acetyltransferase, N-terminal RD1_RS13860 PF13547 RD1_RS13860 RD1_RS13860 PF13550 RD1_RS13860 RD1_RS13870 PF09356 RD1_RS13870 RD1_RS13870 PF09931 RD1_RS13870 RD1_RS13875 PF09343 RD1_RS13875 RD1_RS13885 PF09550 RD1_RS13885 RD1_RS13890 PF11836 RD1_RS13890 RD1_RS13895 PF06199 RD1_RS13895 RD1_RS13900 PF11367 Protein of unknown function (DUF3168) RD1_RS13905 PF05521 Phage head-tail joining protein RD1_RS13910 PF05135 Phage gp6-like head-tail connector protein RD1_RS13915 PF05065 Phage capsid family RD1_RS13920 PF04586 RD1_RS13920 RD1_RS13930 PF04860 Phage portal protein RD1_RS13935 PF03237 Terminase-like family RD1_RS13945 PF02618 YceG-like family RD1_RS13950 PF00109 Beta-ketoacyl synthase, N-terminal domain RD1_RS13950 PF02801 Beta-ketoacyl synthase, C-terminal domain RD1_RS13955 PF13302 Acetyltransferase (GNAT) domain RD1_RS13960 PF00550 Phosphopantetheine attachment site RD1_RS13965 PF13561 Enoyl-(Acyl carrier protein) reductase RD1_RS13970 PF00698 Acyl transferase domain RD1_RS13975 PF01292 Prokaryotic cytochrome b561 RD1_RS13975 PF04264 YceI-like domain RD1_RS13980 PF04264 YceI-like domain RD1_RS13985 PF01250 Ribosomal protein S6 RD1_RS13990 PF01084 Ribosomal protein S18 RD1_RS13995 PF01281 Ribosomal protein L9, N-terminal domain RD1_RS13995 PF03948 Ribosomal protein L9, C-terminal domain RD1_RS14000 PF01786 Alternative oxidase RD1_RS14005 PF00230 Major intrinsic protein RD1_RS14010 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase RD1_RS14010 PF05697 Bacterial trigger factor protein (TF) RD1_RS14010 PF05698 Bacterial trigger factor protein (TF) C-terminus RD1_RS14015 PF00027 Cyclic nucleotide-binding domain RD1_RS14015 PF00664 ABC transporter transmembrane region RD1_RS14030 PF01728 FtsJ-like methyltransferase RD1_RS14035 PF02541 Ppx/GppA phosphatase family RD1_RS14040 PF13769 RD1_RS14040 RD1_RS14050 PF00809 Pterin binding enzyme RD1_RS14055 PF13466 STAS domain RD1_RS14060 PF00072 Response regulator receiver domain RD1_RS14065 PF01584 CheW-like domain RD1_RS14065 PF01627 Hpt domain RD1_RS14065 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RD1_RS14065 PF02895 Signal transducing histidine kinase, homodimeric domain RD1_RS14070 PF01584 CheW-like domain RD1_RS14075 PF01739 CheR methyltransferase, SAM binding domain RD1_RS14075 PF03705 CheR methyltransferase, all-alpha domain RD1_RS14080 PF00072 Response regulator receiver domain RD1_RS14090 PF13683 RD1_RS14090 RD1_RS14095 PF13276 RD1_RS14095 RD1_RS14095 PF13683 RD1_RS14095 RD1_RS14110 PF00353 Hemolysin-type calcium-binding repeat (2 copies) RD1_RS14120 PF00589 Phage integrase family RD1_RS14125 PF01381 Helix-turn-helix RD1_RS14135 PF00370 FGGY family of carbohydrate kinases, N-terminal domain RD1_RS14140 PF05336 Domain of unknown function (DUF718) RD1_RS14145 PF02653 RD1_RS14145 RD1_RS14150 PF02653 RD1_RS14150 RD1_RS14155 PF00005 ABC transporter RD1_RS14160 PF13407 Periplasmic binding protein domain RD1_RS14165 PF00455 RD1_RS14165 RD1_RS14165 PF08220 DeoR-like helix-turn-helix domain RD1_RS14170 PF00596 Class II Aldolase and Adducin N-terminal domain RD1_RS14170 PF13561 Enoyl-(Acyl carrier protein) reductase RD1_RS14180 PF00512 His Kinase A (phospho-acceptor) domain RD1_RS14180 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RD1_RS14180 PF02743 Cache domain RD1_RS14180 PF08447 PAS fold RD1_RS14185 PF00072 Response regulator receiver domain RD1_RS14185 PF00196 Bacterial regulatory proteins, luxR family RD1_RS14190 PF01761 3-dehydroquinate synthase RD1_RS14195 PF01202 Shikimate kinase RD1_RS14205 PF00589 Phage integrase family RD1_RS14205 PF02899 Phage integrase, N-terminal SAM-like domain RD1_RS14210 PF00571 CBS domain RD1_RS14210 PF01595 RD1_RS14210 RD1_RS14210 PF03471 Transporter associated domain RD1_RS14215 PF01266 FAD dependent oxidoreductase RD1_RS14215 PF01571 Aminomethyltransferase folate-binding domain RD1_RS14215 PF08669 Glycine cleavage T-protein C-terminal barrel domain RD1_RS14215 PF16350 RD1_RS14215 RD1_RS14220 PF10011 Predicted membrane protein (DUF2254) RD1_RS14225 PF12146 Putative lysophospholipase RD1_RS14230 PF09084 NMT1/THI5 like RD1_RS14235 PF00528 Binding-protein-dependent transport system inner membrane component RD1_RS14240 PF00528 Binding-protein-dependent transport system inner membrane component RD1_RS14245 PF00005 ABC transporter RD1_RS14250 PF01979 Amidohydrolase family RD1_RS14255 PF01546 Peptidase family M20/M25/M40 RD1_RS14255 PF07687 Peptidase dimerisation domain RD1_RS14260 PF00440 Bacterial regulatory proteins, tetR family RD1_RS14260 PF08362 YcdC-like protein, C-terminal region RD1_RS14265 PF01180 Dihydroorotate dehydrogenase RD1_RS14265 PF14697 4Fe-4S dicluster domain RD1_RS14270 PF07992 Pyridine nucleotide-disulphide oxidoreductase RD1_RS14270 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster RD1_RS14280 PF01339 CheB methylesterase RD1_RS14280 PF01739 CheR methyltransferase, SAM binding domain RD1_RS14280 PF03705 CheR methyltransferase, all-alpha domain RD1_RS14280 PF08447 PAS fold RD1_RS14280 PF13426 PAS domain RD1_RS14290 PF01263 Aldose 1-epimerase RD1_RS14295 PF04994 TfoX C-terminal domain RD1_RS14300 PF00334 Nucleoside diphosphate kinase RD1_RS14305 PF00005 ABC transporter RD1_RS14305 PF12848 ABC transporter RD1_RS14310 PF02830 V4R domain RD1_RS14315 PF01914 RD1_RS14315 RD1_RS14320 PF13975 RD1_RS14320 RD1_RS14325 PF04364 DNA polymerase III chi subunit, HolC RD1_RS14330 PF00883 Cytosol aminopeptidase family, catalytic domain RD1_RS14335 PF03739 RD1_RS14335 RD1_RS14340 PF03739 RD1_RS14340 RD1_RS14345 PF04453 Organic solvent tolerance protein RD1_RS14350 PF00639 PPIC-type PPIASE domain RD1_RS14350 PF09312 SurA N-terminal domain RD1_RS14355 PF04166 Pyridoxal phosphate biosynthetic protein PdxA RD1_RS14360 PF00398 Ribosomal RNA adenine dimethylase RD1_RS14365 PF13763 RD1_RS14365 RD1_RS14370 PF05175 Methyltransferase small domain RD1_RS14375 PF00472 RF-1 domain RD1_RS14375 PF03462 PCRF domain RD1_RS14385 PF07386 RD1_RS14385 RD1_RS14390 PF00491 Arginase family RD1_RS14395 PF00491 Arginase family RD1_RS14400 PF01546 Peptidase family M20/M25/M40 RD1_RS14400 PF07687 Peptidase dimerisation domain RD1_RS14405 PF03819 MazG nucleotide pyrophosphohydrolase domain RD1_RS14410 PF01156 Inosine-uridine preferring nucleoside hydrolase RD1_RS14415 PF00583 Acetyltransferase (GNAT) family RD1_RS14420 PF02696 RD1_RS14420 RD1_RS14425 PF00892 EamA-like transporter family RD1_RS14430 PF00270 DEAD/DEAH box helicase RD1_RS14430 PF00271 Helicase conserved C-terminal domain RD1_RS14435 PF01475 Ferric uptake regulator family RD1_RS14440 PF00892 EamA-like transporter family RD1_RS14445 PF00113 Enolase, C-terminal TIM barrel domain RD1_RS14445 PF03952 Enolase, N-terminal domain RD1_RS14450 PF00583 Acetyltransferase (GNAT) family RD1_RS14455 PF01266 FAD dependent oxidoreductase RD1_RS14460 PF03702 Uncharacterised protein family (UPF0075) RD1_RS14465 PF00579 tRNA synthetases class I (W and Y) RD1_RS14470 PF00106 short chain dehydrogenase RD1_RS14480 PF00005 ABC transporter RD1_RS14480 PF16326 RD1_RS14480 RD1_RS14485 PF13444 Acetyltransferase (GNAT) domain RD1_RS14490 PF04355 SmpA / OmlA family RD1_RS14495 PF02620 RD1_RS14495 RD1_RS14500 PF01783 Ribosomal L32p protein family RD1_RS14505 PF02504 Fatty acid synthesis protein RD1_RS14510 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal RD1_RS14510 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III RD1_RS14515 PF00216 Bacterial DNA-binding protein RD1_RS14520 PF13411 MerR HTH family regulatory protein RD1_RS14530 PF06559 2'-deoxycytidine 5'-triphosphate deaminase (DCD) RD1_RS14535 PF04079 Putative transcriptional regulators (Ypuh-like) RD1_RS14540 PF02616 ScpA/B protein RD1_RS14545 PF00933 Glycosyl hydrolase family 3 N terminal domain RD1_RS14550 PF05036 Sporulation related domain RD1_RS14555 PF00750 tRNA synthetases class I (R) RD1_RS14555 PF03485 Arginyl tRNA synthetase N terminal domain RD1_RS14555 PF05746 DALR anticodon binding domain RD1_RS14560 PF01966 HD domain RD1_RS14560 PF13286 Phosphohydrolase-associated domain RD1_RS14565 PF01521 Iron-sulphur cluster biosynthesis RD1_RS14580 PF03372 Endonuclease/Exonuclease/phosphatase family RD1_RS14585 PF04391 RD1_RS14585 RD1_RS14590 PF14279 RD1_RS14590 RD1_RS14600 PF02230 Phospholipase/Carboxylesterase RD1_RS14605 PF00730 HhH-GPD superfamily base excision DNA repair protein RD1_RS14610 PF02571 RD1_RS14610 RD1_RS14615 PF07690 Major Facilitator Superfamily RD1_RS14620 PF00494 Squalene/phytoene synthase RD1_RS14625 PF00682 HMGL-like RD1_RS14625 PF08502 LeuA allosteric (dimerisation) domain RD1_RS14630 PF01406 tRNA synthetases class I (C) catalytic domain RD1_RS14635 PF00155 Aminotransferase class I and II RD1_RS14640 PF06253 Trimethylamine methyltransferase (MTTB) RD1_RS14645 PF13202 EF hand RD1_RS14655 PF13673 Acetyltransferase (GNAT) domain RD1_RS14660 PF02867 Ribonucleotide reductase, barrel domain RD1_RS14660 PF08471 RD1_RS14660 RD1_RS14670 PF02643 Uncharacterized ACR, COG1430 RD1_RS14675 PF00313 'Cold-shock' DNA-binding domain RD1_RS14680 PF01243 Pyridoxamine 5'-phosphate oxidase RD1_RS14680 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region RD1_RS14685 PF13561 Enoyl-(Acyl carrier protein) reductase RD1_RS14690 PF01810 RD1_RS14690 RD1_RS14695 PF00156 Phosphoribosyl transferase domain RD1_RS14700 PF00155 Aminotransferase class I and II RD1_RS14705 PF13145 PPIC-type PPIASE domain RD1_RS14705 PF13624 SurA N-terminal domain RD1_RS14710 PF00425 chorismate binding enzyme RD1_RS14710 PF04715 Anthranilate synthase component I, N terminal region RD1_RS14715 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family RD1_RS14720 PF00563 EAL domain RD1_RS14720 PF00990 GGDEF domain RD1_RS14720 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term RD1_RS14725 PF04748 Divergent polysaccharide deacetylase RD1_RS14730 PF00117 Glutamine amidotransferase class-I RD1_RS14735 PF00591 Glycosyl transferase family, a/b domain RD1_RS14735 PF02885 Glycosyl transferase family, helical bundle domain RD1_RS14740 PF03167 Uracil DNA glycosylase superfamily RD1_RS14745 PF00218 Indole-3-glycerol phosphate synthase RD1_RS14750 PF01967 MoaC family RD1_RS14755 PF00994 Probable molybdopterin binding domain RD1_RS14755 PF03453 MoeA N-terminal region (domain I and II) RD1_RS14755 PF03454 MoeA C-terminal region (domain IV) RD1_RS14760 PF00717 Peptidase S24-like RD1_RS14760 PF01726 LexA DNA binding domain RD1_RS14765 PF03772 RD1_RS14765 RD1_RS14765 PF13567 RD1_RS14765 RD1_RS14770 PF00749 tRNA synthetases class I (E and Q), catalytic domain RD1_RS14775 PF00285 Citrate synthase RD1_RS14785 PF00378 Enoyl-CoA hydratase/isomerase family RD1_RS14790 PF03918 Cytochrome C biogenesis protein RD1_RS14795 PF01578 RD1_RS14795 RD1_RS14795 PF16327 RD1_RS14795 RD1_RS14800 PF11351 RD1_RS14800 RD1_RS14810 PF03100 CcmE RD1_RS14815 PF01118 Semialdehyde dehydrogenase, NAD binding domain RD1_RS14815 PF02774 Semialdehyde dehydrogenase, dimerisation domain RD1_RS14820 PF01177 Asp/Glu/Hydantoin racemase RD1_RS14825 PF01553 Acyltransferase RD1_RS14830 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase RD1_RS14830 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain RD1_RS14835 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RD1_RS14835 PF03466 LysR substrate binding domain RD1_RS14840 PF00586 AIR synthase related protein, N-terminal domain RD1_RS14840 PF02769 AIR synthase related protein, C-terminal domain RD1_RS14845 PF05762 VWA domain containing CoxE-like protein RD1_RS14850 PF07728 AAA domain (dynein-related subfamily) RD1_RS14855 PF01979 Amidohydrolase family RD1_RS14860 PF00156 Phosphoribosyl transferase domain RD1_RS14865 PF00772 DnaB-like helicase N terminal domain RD1_RS14865 PF03796 DnaB-like helicase C terminal domain RD1_RS14875 PF00842 Alanine racemase, C-terminal domain RD1_RS14875 PF01168 Alanine racemase, N-terminal domain RD1_RS14880 PF02405 RD1_RS14880 RD1_RS14885 PF00005 ABC transporter RD1_RS14895 PF13481 AAA domain RD1_RS14895 PF13541 Subunit ChlI of Mg-chelatase RD1_RS14900 PF02674 RD1_RS14900 RD1_RS14905 PF13537 Glutamine amidotransferase domain RD1_RS14910 PF00106 short chain dehydrogenase RD1_RS14915 PF01975 Survival protein SurE RD1_RS14920 PF01135 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) RD1_RS14925 PF01476 LysM domain RD1_RS14925 PF01551 Peptidase family M23 RD1_RS14930 PF05673 Protein of unknown function (DUF815) RD1_RS14935 PF00902 Sec-independent protein translocase protein (TatC) RD1_RS14940 PF02416 mttA/Hcf106 family RD1_RS14945 PF02416 mttA/Hcf106 family RD1_RS14955 PF08279 HTH domain RD1_RS14955 PF13280 RD1_RS14955 RD1_RS14960 PF09585 Conserved hypothetical protein (Lin0512_fam) RD1_RS14965 PF09585 Conserved hypothetical protein (Lin0512_fam) RD1_RS14970 PF00005 ABC transporter RD1_RS14970 PF08402 TOBE domain RD1_RS14975 PF13561 Enoyl-(Acyl carrier protein) reductase RD1_RS14980 PF00009 Elongation factor Tu GTP binding domain RD1_RS14980 PF03144 Elongation factor Tu domain 2 RD1_RS14980 PF16658 RD1_RS14980 RD1_RS14985 PF00270 DEAD/DEAH box helicase RD1_RS14985 PF00271 Helicase conserved C-terminal domain RD1_RS14990 PF00753 Metallo-beta-lactamase superfamily RD1_RS14990 PF07521 RNA-metabolising metallo-beta-lactamase RD1_RS14995 PF03309 Type III pantothenate kinase RD1_RS15000 PF03099 Biotin/lipoate A/B protein ligase family RD1_RS15005 PF00361 NADH-Ubiquinone/plastoquinone (complex I), various chains RD1_RS15010 PF00361 NADH-Ubiquinone/plastoquinone (complex I), various chains RD1_RS15015 PF00361 NADH-Ubiquinone/plastoquinone (complex I), various chains RD1_RS15015 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus RD1_RS15020 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L RD1_RS15030 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 RD1_RS15035 PF02627 Carboxymuconolactone decarboxylase family RD1_RS15040 PF12838 4Fe-4S dicluster domain RD1_RS15045 PF00146 NADH dehydrogenase RD1_RS15055 PF00111 2Fe-2S iron-sulfur cluster binding domain RD1_RS15055 PF00384 Molybdopterin oxidoreductase RD1_RS15055 PF09326 RD1_RS15055 RD1_RS15055 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region RD1_RS15070 PF11695 RD1_RS15070 RD1_RS15075 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit RD1_RS15075 PF10531 SLBB domain RD1_RS15075 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region RD1_RS15090 PF01257 Thioredoxin-like [2Fe-2S] ferredoxin RD1_RS15095 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit RD1_RS15105 PF13469 Sulfotransferase family RD1_RS15110 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit RD1_RS15115 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit RD1_RS15120 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 RD1_RS15125 PF02469 Fasciclin domain RD1_RS15130 PF00378 Enoyl-CoA hydratase/isomerase family RD1_RS15135 PF00682 HMGL-like RD1_RS15140 PF00043 Glutathione S-transferase, C-terminal domain RD1_RS15140 PF02798 Glutathione S-transferase, N-terminal domain RD1_RS15145 PF00289 Carbamoyl-phosphate synthase L chain, N-terminal domain RD1_RS15145 PF00364 Biotin-requiring enzyme RD1_RS15145 PF02785 Biotin carboxylase C-terminal domain RD1_RS15145 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain RD1_RS15150 PF01039 Carboxyl transferase domain RD1_RS15160 PF03922 OmpW family RD1_RS15165 PF00441 Acyl-CoA dehydrogenase, C-terminal domain RD1_RS15165 PF02770 Acyl-CoA dehydrogenase, middle domain RD1_RS15165 PF02771 Acyl-CoA dehydrogenase, N-terminal domain RD1_RS15170 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family RD1_RS15175 PF13419 Haloacid dehalogenase-like hydrolase RD1_RS15180 PF00132 Bacterial transferase hexapeptide (six repeats) RD1_RS15180 PF12804 MobA-like NTP transferase domain RD1_RS15185 PF01380 SIS domain RD1_RS15185 PF13522 Glutamine amidotransferase domain RD1_RS15190 PF01243 Pyridoxamine 5'-phosphate oxidase RD1_RS15195 PF04055 Radical SAM superfamily RD1_RS15195 PF06463 Molybdenum Cofactor Synthesis C RD1_RS15195 PF13353 4Fe-4S single cluster domain RD1_RS15200 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) RD1_RS15205 PF00534 Glycosyl transferases group 1 RD1_RS15210 PF01546 Peptidase family M20/M25/M40 RD1_RS15210 PF07687 Peptidase dimerisation domain RD1_RS15215 PF01546 Peptidase family M20/M25/M40 RD1_RS15215 PF07687 Peptidase dimerisation domain RD1_RS15225 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle RD1_RS15230 PF00528 Binding-protein-dependent transport system inner membrane component RD1_RS15235 PF00528 Binding-protein-dependent transport system inner membrane component RD1_RS15235 PF12911 RD1_RS15235 RD1_RS15240 PF11902 RD1_RS15240 RD1_RS15245 PF02233 NAD(P) transhydrogenase beta subunit RD1_RS15250 PF01262 Alanine dehydrogenase/PNT, C-terminal domain RD1_RS15250 PF05222 Alanine dehydrogenase/PNT, N-terminal domain RD1_RS15250 PF12769 Domain of unknown function (DUF3814) RD1_RS15255 PF04191 Phospholipid methyltransferase RD1_RS15260 PF00106 short chain dehydrogenase RD1_RS15265 PF07722 Peptidase C26 RD1_RS15270 PF01274 Malate synthase RD1_RS15275 PF01433 Peptidase family M1 RD1_RS15275 PF11940 Domain of unknown function (DUF3458) RD1_RS15280 PF13561 Enoyl-(Acyl carrier protein) reductase RD1_RS15290 PF01464 Transglycosylase SLT domain RD1_RS15305 PF02637 GatB domain RD1_RS15305 PF02934 GatB/GatE catalytic domain RD1_RS15320 PF13279 Thioesterase-like superfamily RD1_RS15325 PF13783 RD1_RS15325 RD1_RS15330 PF01722 BolA-like protein RD1_RS15335 PF00226 DnaJ domain RD1_RS15340 PF07728 AAA domain (dynein-related subfamily) RD1_RS15340 PF08406 RD1_RS15340 RD1_RS15340 PF12556 RD1_RS15340 RD1_RS15345 PF06213 RD1_RS15345 RD1_RS15345 PF11775 RD1_RS15345 RD1_RS15350 PF00557 Metallopeptidase family M24 RD1_RS15350 PF01321 Creatinase/Prolidase N-terminal domain RD1_RS15350 PF16188 RD1_RS15350 RD1_RS15350 PF16189 RD1_RS15350 RD1_RS15355 PF04248 Domain of unknown function (DUF427) RD1_RS15360 PF00654 Voltage gated chloride channel RD1_RS15365 PF02463 RecF/RecN/SMC N terminal domain RD1_RS15370 PF13525 Outer membrane lipoprotein RD1_RS15375 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase RD1_RS15385 PF02491 SHS2 domain inserted in FTSA RD1_RS15385 PF14450 Cell division protein FtsA RD1_RS15390 PF03799 Cell division protein FtsQ RD1_RS15390 PF08478 POTRA domain, FtsQ-type RD1_RS15395 PF01820 D-ala D-ala ligase N-terminus RD1_RS15395 PF07478 D-ala D-ala ligase C-terminus RD1_RS15400 PF01565 FAD binding domain RD1_RS15400 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain RD1_RS15405 PF10658 RD1_RS15405 RD1_RS15410 PF01225 Mur ligase family, catalytic domain RD1_RS15410 PF02875 Mur ligase family, glutamate ligase domain RD1_RS15410 PF08245 Mur ligase middle domain RD1_RS15415 PF03033 Glycosyltransferase family 28 N-terminal domain RD1_RS15415 PF04101 Glycosyltransferase family 28 C-terminal domain RD1_RS15420 PF01098 RD1_RS15420 RD1_RS15425 PF03486 HI0933-like protein RD1_RS15430 PF02875 Mur ligase family, glutamate ligase domain RD1_RS15430 PF08245 Mur ligase middle domain RD1_RS15435 PF00953 Glycosyl transferase family 4 RD1_RS15435 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 RD1_RS15440 PF01225 Mur ligase family, catalytic domain RD1_RS15440 PF02875 Mur ligase family, glutamate ligase domain RD1_RS15440 PF08245 Mur ligase middle domain RD1_RS15445 PF01225 Mur ligase family, catalytic domain RD1_RS15445 PF02875 Mur ligase family, glutamate ligase domain RD1_RS15445 PF08245 Mur ligase middle domain RD1_RS15450 PF00905 Penicillin binding protein transpeptidase domain RD1_RS15450 PF03717 Penicillin-binding Protein dimerisation domain RD1_RS15460 PF01795 MraW methylase family RD1_RS15465 PF02381 MraZ protein RD1_RS15470 PF01883 Domain of unknown function DUF59 RD1_RS15470 PF10609 ParA/MinD ATPase like RD1_RS15475 PF06568 RD1_RS15475 RD1_RS15480 PF08975 Domain of unknown function (DUF1868) RD1_RS15485 PF00580 UvrD/REP helicase N-terminal domain RD1_RS15485 PF13361 UvrD-like helicase C-terminal domain RD1_RS15490 PF01070 FMN-dependent dehydrogenase RD1_RS15495 PF00289 Carbamoyl-phosphate synthase L chain, N-terminal domain RD1_RS15495 PF00364 Biotin-requiring enzyme RD1_RS15495 PF00682 HMGL-like RD1_RS15495 PF02436 Conserved carboxylase domain RD1_RS15495 PF02785 Biotin carboxylase C-terminal domain RD1_RS15495 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain RD1_RS15500 PF02310 B12 binding domain RD1_RS15515 PF13276 RD1_RS15515 RD1_RS15515 PF13683 RD1_RS15515 RD1_RS15520 PF00665 Integrase core domain RD1_RS15525 PF00691 OmpA family RD1_RS15535 PF04752 RD1_RS15535 RD1_RS15540 PF09898 RD1_RS15540 RD1_RS15545 PF06904 RD1_RS15545 RD1_RS15550 PF02153 Prephenate dehydrogenase RD1_RS15555 PF00155 Aminotransferase class I and II RD1_RS15560 PF01757 RD1_RS15560 RD1_RS15565 PF00163 Ribosomal protein S4/S9 N-terminal domain RD1_RS15565 PF01479 S4 domain RD1_RS15570 PF03352 Methyladenine glycosylase RD1_RS15575 PF00563 EAL domain RD1_RS15580 PF00108 Thiolase, N-terminal domain RD1_RS15580 PF02803 Thiolase, C-terminal domain RD1_RS15585 PF13561 Enoyl-(Acyl carrier protein) reductase RD1_RS15590 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RD1_RS15590 PF03466 LysR substrate binding domain RD1_RS15595 PF05175 Methyltransferase small domain RD1_RS15600 PF09413 Domain of unknown function (DUF2007) RD1_RS15605 PF00348 Polyprenyl synthetase RD1_RS15610 PF08544 GHMP kinases C terminal RD1_RS15615 PF13429 Tetratricopeptide repeat RD1_RS15615 PF13432 Tetratricopeptide repeat RD1_RS15620 PF05187 Electron transfer flavoprotein-ubiquinone oxidoreductase RD1_RS15620 PF13450 NAD(P)-binding Rossmann-like domain RD1_RS15630 PF01272 Transcription elongation factor, GreA/GreB, C-term RD1_RS15630 PF03449 Transcription elongation factor, N-terminal RD1_RS15640 PF00994 Probable molybdopterin binding domain RD1_RS15640 PF03453 MoeA N-terminal region (domain I and II) RD1_RS15640 PF03454 MoeA C-terminal region (domain IV) RD1_RS15645 PF03205 Molybdopterin guanine dinucleotide synthesis protein B RD1_RS15650 PF12804 MobA-like NTP transferase domain RD1_RS15655 PF02634 FdhD/NarQ family RD1_RS15660 PF03591 RD1_RS15660 RD1_RS15665 PF05437 RD1_RS15665 RD1_RS15675 PF07835 Bacterial aa3 type cytochrome c oxidase subunit IV RD1_RS15685 PF00753 Metallo-beta-lactamase superfamily RD1_RS15690 PF00441 Acyl-CoA dehydrogenase, C-terminal domain RD1_RS15690 PF02770 Acyl-CoA dehydrogenase, middle domain RD1_RS15690 PF02771 Acyl-CoA dehydrogenase, N-terminal domain RD1_RS15690 PF12806 RD1_RS15690 RD1_RS15695 PF01300 Telomere recombination RD1_RS15695 PF03481 Putative GTP-binding controlling metal-binding RD1_RS15700 PF02622 Uncharacterized ACR, COG1678 RD1_RS15705 PF11412 Disulphide bond corrector protein DsbC RD1_RS15710 PF00873 AcrB/AcrD/AcrF family RD1_RS15715 PF13437 HlyD family secretion protein RD1_RS15720 PF00994 Probable molybdopterin binding domain RD1_RS15725 PF01810 RD1_RS15725 RD1_RS15730 PF03167 Uracil DNA glycosylase superfamily RD1_RS15735 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain RD1_RS15735 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain RD1_RS15745 PF01979 Amidohydrolase family RD1_RS15750 PF02660 RD1_RS15750 RD1_RS15760 PF06339 RD1_RS15760 RD1_RS15765 PF00248 Aldo/keto reductase family RD1_RS15770 PF06080 RD1_RS15770 RD1_RS15775 PF01266 FAD dependent oxidoreductase RD1_RS15775 PF01571 Aminomethyltransferase folate-binding domain RD1_RS15775 PF08669 Glycine cleavage T-protein C-terminal barrel domain RD1_RS15775 PF16350 RD1_RS15775 RD1_RS15780 PF01565 FAD binding domain RD1_RS15780 PF02913 FAD linked oxidases, C-terminal domain RD1_RS15785 PF01019 Gamma-glutamyltranspeptidase RD1_RS15790 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain RD1_RS15790 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain RD1_RS15795 PF06347 Bacterial SH3 domain RD1_RS15800 PF00107 Zinc-binding dehydrogenase RD1_RS15800 PF08240 Alcohol dehydrogenase GroES-like domain RD1_RS15820 PF11994 RD1_RS15820 RD1_RS15825 PF05598 RD1_RS15825 RD1_RS15825 PF13751 RD1_RS15825 RD1_RS15835 PF01381 Helix-turn-helix RD1_RS15835 PF06114 Domain of unknown function (DUF955) RD1_RS15840 PF00580 UvrD/REP helicase N-terminal domain RD1_RS15840 PF13361 UvrD-like helicase C-terminal domain RD1_RS15845 PF13304 AAA domain RD1_RS15850 PF13276 RD1_RS15850 RD1_RS15850 PF13683 RD1_RS15850 RD1_RS15855 PF01527 Transposase RD1_RS15870 PF01527 Transposase RD1_RS15875 PF00665 Integrase core domain RD1_RS15875 PF13276 RD1_RS15875 RD1_RS15890 PF00353 Hemolysin-type calcium-binding repeat (2 copies) RD1_RS15895 PF01527 Transposase RD1_RS15910 PF00353 Hemolysin-type calcium-binding repeat (2 copies) RD1_RS15915 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RD1_RS15920 PF00072 Response regulator receiver domain RD1_RS15920 PF00486 Transcriptional regulatory protein, C terminal RD1_RS15930 PF05036 Sporulation related domain RD1_RS15935 PF00768 D-alanyl-D-alanine carboxypeptidase RD1_RS15935 PF07943 Penicillin-binding protein 5, C-terminal domain RD1_RS15940 PF02223 Thymidylate kinase RD1_RS15945 PF13177 DNA polymerase III, delta subunit RD1_RS15950 PF01026 TatD related DNase RD1_RS15955 PF12706 Beta-lactamase superfamily domain RD1_RS15960 PF03547 RD1_RS15960 RD1_RS15965 PF01177 Asp/Glu/Hydantoin racemase RD1_RS15970 PF00557 Metallopeptidase family M24 RD1_RS15970 PF01321 Creatinase/Prolidase N-terminal domain RD1_RS15975 PF00291 Pyridoxal-phosphate dependent enzyme RD1_RS15980 PF00557 Metallopeptidase family M24 RD1_RS15980 PF01321 Creatinase/Prolidase N-terminal domain RD1_RS15985 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family RD1_RS15990 PF13419 Haloacid dehalogenase-like hydrolase RD1_RS16005 PF01032 FecCD transport family RD1_RS16010 PF01497 Periplasmic binding protein RD1_RS16015 PF00005 ABC transporter RD1_RS16020 PF07845 RD1_RS16020 RD1_RS16030 PF13533 Biotin-lipoyl like RD1_RS16035 PF03773 RD1_RS16035 RD1_RS16040 PF12840 Helix-turn-helix domain RD1_RS16050 PF12697 Alpha/beta hydrolase family RD1_RS16055 PF02142 MGS-like domain RD1_RS16055 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain RD1_RS16055 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain RD1_RS16065 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal RD1_RS16065 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III RD1_RS16075 PF00265 Thymidine kinase RD1_RS16080 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain RD1_RS16080 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain RD1_RS16085 PF01588 Putative tRNA binding domain RD1_RS16090 PF03807 NADP oxidoreductase coenzyme F420-dependent RD1_RS16090 PF14748 Pyrroline-5-carboxylate reductase dimerisation RD1_RS16095 PF10722 Putative bacterial sensory transduction regulator RD1_RS16100 PF04380 RD1_RS16100 RD1_RS16105 PF01790 RD1_RS16105 RD1_RS16110 PF02636 Putative S-adenosyl-L-methionine-dependent methyltransferase RD1_RS16115 PF02578 Multi-copper polyphenol oxidoreductase laccase RD1_RS16120 PF01037 AsnC family RD1_RS16120 PF13412 Winged helix-turn-helix DNA-binding RD1_RS16125 PF07992 Pyridine nucleotide-disulphide oxidoreductase RD1_RS16130 PF00067 Cytochrome P450 RD1_RS16135 PF06620 RD1_RS16135 RD1_RS16140 PF00011 Hsp20/alpha crystallin family RD1_RS16145 PF04325 Protein of unknown function (DUF465) RD1_RS16150 PF00731 AIR carboxylase RD1_RS16155 PF02222 ATP-grasp domain RD1_RS16160 PF07969 Amidohydrolase family RD1_RS16165 PF12697 Alpha/beta hydrolase family RD1_RS16170 PF00293 NUDIX domain RD1_RS16175 PF00892 EamA-like transporter family RD1_RS16180 PF00118 TCP-1/cpn60 chaperonin family RD1_RS16185 PF00166 Chaperonin 10 Kd subunit RD1_RS16190 PF09929 RD1_RS16190 RD1_RS16200 PF01368 DHH family RD1_RS16200 PF02833 DHHA2 domain RD1_RS16205 PF13242 HAD-hyrolase-like RD1_RS16205 PF13344 Haloacid dehalogenase-like hydrolase RD1_RS16210 PF01575 MaoC like domain RD1_RS16215 PF01687 Riboflavin kinase RD1_RS16215 PF06574 FAD synthetase RD1_RS16220 PF03692 RD1_RS16220 RD1_RS16225 PF01212 Beta-eliminating lyase RD1_RS16230 PF12697 Alpha/beta hydrolase family RD1_RS16235 PF01323 DSBA-like thioredoxin domain RD1_RS16240 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase RD1_RS16240 PF14572 Phosphoribosyl synthetase-associated domain RD1_RS16255 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain RD1_RS16260 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain RD1_RS16260 PF02874 ATP synthase alpha/beta family, beta-barrel domain RD1_RS16265 PF00231 ATP synthase RD1_RS16270 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain RD1_RS16270 PF00306 ATP synthase alpha/beta chain, C terminal domain RD1_RS16270 PF02874 ATP synthase alpha/beta family, beta-barrel domain RD1_RS16275 PF00213 ATP synthase delta (OSCP) subunit RD1_RS16285 PF00753 Metallo-beta-lactamase superfamily RD1_RS16285 PF16123 RD1_RS16285 RD1_RS16290 PF00004 ATPase family associated with various cellular activities (AAA) RD1_RS16290 PF02861 Clp amino terminal domain RD1_RS16290 PF07724 AAA domain (Cdc48 subfamily) RD1_RS16290 PF10431 C-terminal, D2-small domain, of ClpB protein RD1_RS16295 PF00270 DEAD/DEAH box helicase RD1_RS16295 PF00271 Helicase conserved C-terminal domain RD1_RS16295 PF00580 UvrD/REP helicase N-terminal domain RD1_RS16295 PF13538 UvrD-like helicase C-terminal domain RD1_RS16300 PF00556 Antenna complex alpha/beta subunit RD1_RS16305 PF03209 RD1_RS16305 RD1_RS16315 PF03334 RD1_RS16315 RD1_RS16320 PF04066 RD1_RS16320 RD1_RS16325 PF01899 RD1_RS16325 RD1_RS16330 PF00361 NADH-Ubiquinone/plastoquinone (complex I), various chains RD1_RS16335 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L RD1_RS16340 PF00361 NADH-Ubiquinone/plastoquinone (complex I), various chains RD1_RS16340 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus RD1_RS16340 PF04039 RD1_RS16340 RD1_RS16340 PF13244 RD1_RS16340 RD1_RS16350 PF01037 AsnC family RD1_RS16355 PF00475 Imidazoleglycerol-phosphate dehydratase RD1_RS16360 PF00117 Glutamine amidotransferase class-I RD1_RS16365 PF14023 RD1_RS16365 RD1_RS16370 PF09917 Uncharacterized protein conserved in bacteria (DUF2147) RD1_RS16375 PF00977 Histidine biosynthesis protein RD1_RS16380 PF00977 Histidine biosynthesis protein RD1_RS16385 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase RD1_RS16390 PF13380 CoA binding domain RD1_RS16400 PF00588 SpoU rRNA Methylase family RD1_RS16400 PF08032 RNA 2'-O ribose methyltransferase substrate binding RD1_RS16405 PF02690 RD1_RS16405 RD1_RS16410 PF00149 Calcineurin-like phosphoesterase RD1_RS16415 PF00528 Binding-protein-dependent transport system inner membrane component RD1_RS16420 PF00528 Binding-protein-dependent transport system inner membrane component RD1_RS16425 PF13416 Bacterial extracellular solute-binding protein RD1_RS16430 PF00005 ABC transporter RD1_RS16430 PF08402 TOBE domain RD1_RS16435 PF00455 RD1_RS16435 RD1_RS16435 PF08220 DeoR-like helix-turn-helix domain RD1_RS16455 PF00072 Response regulator receiver domain RD1_RS16455 PF00512 His Kinase A (phospho-acceptor) domain RD1_RS16455 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RD1_RS16455 PF13426 PAS domain RD1_RS16460 PF00174 Oxidoreductase molybdopterin binding domain RD1_RS16465 PF00072 Response regulator receiver domain RD1_RS16465 PF00196 Bacterial regulatory proteins, luxR family RD1_RS16480 PF12833 Helix-turn-helix domain RD1_RS16480 PF14525 RD1_RS16480 RD1_RS16485 PF01968 Hydantoinase/oxoprolinase RD1_RS16485 PF05378 RD1_RS16485 RD1_RS16490 PF02538 RD1_RS16490 RD1_RS16495 PF00005 ABC transporter RD1_RS16500 PF00005 ABC transporter RD1_RS16505 PF02653 RD1_RS16505 RD1_RS16510 PF02653 RD1_RS16510 RD1_RS16515 PF13458 Periplasmic binding protein RD1_RS16525 PF13515 RD1_RS16525 RD1_RS16530 PF16576 RD1_RS16530 RD1_RS16535 PF00072 Response regulator receiver domain RD1_RS16535 PF00196 Bacterial regulatory proteins, luxR family RD1_RS16540 PF00072 Response regulator receiver domain RD1_RS16540 PF00512 His Kinase A (phospho-acceptor) domain RD1_RS16540 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RD1_RS16545 PF13433 Periplasmic binding protein domain RD1_RS16550 PF02653 RD1_RS16550 RD1_RS16555 PF02653 RD1_RS16555 RD1_RS16560 PF00005 ABC transporter RD1_RS16560 PF12399 Branched-chain amino acid ATP-binding cassette transporter RD1_RS16565 PF00005 ABC transporter RD1_RS16570 PF03069 Acetamidase/Formamidase family RD1_RS16580 PF16316 RD1_RS16580 RD1_RS16585 PF09359 VTC domain RD1_RS16590 PF06808 RD1_RS16590 RD1_RS16595 PF04290 RD1_RS16595 RD1_RS16600 PF03480 Bacterial extracellular solute-binding protein, family 7 RD1_RS16605 PF02110 Hydroxyethylthiazole kinase family RD1_RS16610 PF02581 Thiamine monophosphate synthase/TENI RD1_RS16615 PF08543 Phosphomethylpyrimidine kinase RD1_RS16620 PF03070 TENA/THI-4/PQQC family RD1_RS16625 PF04198 Putative sugar-binding domain RD1_RS16625 PF13545 Crp-like helix-turn-helix domain RD1_RS16630 PF13685 Iron-containing alcohol dehydrogenase RD1_RS16635 PF00106 short chain dehydrogenase RD1_RS16640 PF00370 FGGY family of carbohydrate kinases, N-terminal domain RD1_RS16640 PF02782 FGGY family of carbohydrate kinases, C-terminal domain RD1_RS16645 PF13242 HAD-hyrolase-like RD1_RS16645 PF13344 Haloacid dehalogenase-like hydrolase RD1_RS16650 PF00528 Binding-protein-dependent transport system inner membrane component RD1_RS16655 PF00528 Binding-protein-dependent transport system inner membrane component RD1_RS16660 PF13416 Bacterial extracellular solute-binding protein RD1_RS16665 PF00005 ABC transporter RD1_RS16665 PF08402 TOBE domain RD1_RS16670 PF00107 Zinc-binding dehydrogenase RD1_RS16670 PF08240 Alcohol dehydrogenase GroES-like domain RD1_RS16675 PF02502 Ribose/Galactose Isomerase RD1_RS16680 PF00121 Triosephosphate isomerase RD1_RS16685 PF01261 Xylose isomerase-like TIM barrel RD1_RS16690 PF13242 HAD-hyrolase-like RD1_RS16690 PF13344 Haloacid dehalogenase-like hydrolase RD1_RS16695 PF00370 FGGY family of carbohydrate kinases, N-terminal domain RD1_RS16695 PF02782 FGGY family of carbohydrate kinases, C-terminal domain RD1_RS16700 PF00596 Class II Aldolase and Adducin N-terminal domain RD1_RS16705 PF01266 FAD dependent oxidoreductase RD1_RS16705 PF16901 RD1_RS16705 RD1_RS16710 PF00596 Class II Aldolase and Adducin N-terminal domain RD1_RS16715 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain RD1_RS16715 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain RD1_RS16720 PF00370 FGGY family of carbohydrate kinases, N-terminal domain RD1_RS16720 PF02782 FGGY family of carbohydrate kinases, C-terminal domain RD1_RS16725 PF00005 ABC transporter RD1_RS16725 PF08402 TOBE domain RD1_RS16730 PF00005 ABC transporter RD1_RS16735 PF00528 Binding-protein-dependent transport system inner membrane component RD1_RS16740 PF00528 Binding-protein-dependent transport system inner membrane component RD1_RS16745 PF01547 Bacterial extracellular solute-binding protein RD1_RS16750 PF04198 Putative sugar-binding domain RD1_RS16755 PF01958 Domain of unknown function DUF108 RD1_RS16755 PF03447 Homoserine dehydrogenase, NAD binding domain RD1_RS16760 PF00266 Aminotransferase class-V RD1_RS16765 PF00884 Sulfatase RD1_RS16770 PF16868 RD1_RS16770 RD1_RS16775 PF06808 RD1_RS16775 RD1_RS16780 PF01614 Bacterial transcriptional regulator RD1_RS16780 PF09339 IclR helix-turn-helix domain RD1_RS16785 PF12802 MarR family RD1_RS16790 PF04209 homogentisate 1,2-dioxygenase RD1_RS16795 PF02798 Glutathione S-transferase, N-terminal domain RD1_RS16800 PF01557 Fumarylacetoacetate (FAA) hydrolase family RD1_RS16800 PF09298 Fumarylacetoacetase N-terminal RD1_RS16805 PF01292 Prokaryotic cytochrome b561 RD1_RS16810 PF00425 chorismate binding enzyme RD1_RS16815 PF07876 Stress responsive A/B Barrel Domain RD1_RS16820 PF00809 Pterin binding enzyme RD1_RS16820 PF02310 B12 binding domain RD1_RS16820 PF02607 B12 binding domain RD1_RS16820 PF02965 Vitamin B12 dependent methionine synthase, activation domain RD1_RS16825 PF02574 Homocysteine S-methyltransferase RD1_RS16830 PF00892 EamA-like transporter family RD1_RS16835 PF02627 Carboxymuconolactone decarboxylase family RD1_RS16840 PF00384 Molybdopterin oxidoreductase RD1_RS16840 PF01568 Molydopterin dinucleotide binding domain RD1_RS16845 PF00072 Response regulator receiver domain RD1_RS16845 PF00486 Transcriptional regulatory protein, C terminal RD1_RS16850 PF00072 Response regulator receiver domain RD1_RS16850 PF00512 His Kinase A (phospho-acceptor) domain RD1_RS16850 PF00672 HAMP domain RD1_RS16850 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RD1_RS16855 PF13407 Periplasmic binding protein domain RD1_RS16860 PF04143 RD1_RS16860 RD1_RS16865 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain RD1_RS16865 PF07992 Pyridine nucleotide-disulphide oxidoreductase RD1_RS16870 PF00462 Glutaredoxin RD1_RS16875 PF04224 RD1_RS16875 RD1_RS16880 PF00440 Bacterial regulatory proteins, tetR family RD1_RS16885 PF00291 Pyridoxal-phosphate dependent enzyme RD1_RS16890 PF00202 Aminotransferase class-III RD1_RS16890 PF01551 Peptidase family M23 RD1_RS16890 PF01636 Phosphotransferase enzyme family RD1_RS16895 PF01979 Amidohydrolase family RD1_RS16900 PF07969 Amidohydrolase family RD1_RS16905 PF00221 Aromatic amino acid lyase RD1_RS16910 PF05013 N-formylglutamate amidohydrolase RD1_RS16915 PF02515 CoA-transferase family III RD1_RS16920 PF00441 Acyl-CoA dehydrogenase, C-terminal domain RD1_RS16920 PF02770 Acyl-CoA dehydrogenase, middle domain RD1_RS16920 PF02771 Acyl-CoA dehydrogenase, N-terminal domain RD1_RS16925 PF01175 Urocanase RD1_RS16930 PF00355 Rieske [2Fe-2S] domain RD1_RS16930 PF00848 Ring hydroxylating alpha subunit (catalytic domain) RD1_RS16935 PF05721 Phytanoyl-CoA dioxygenase (PhyH) RD1_RS16940 PF13442 Cytochrome C oxidase, cbb3-type, subunit III RD1_RS16945 PF07995 Glucose / Sorbosone dehydrogenase RD1_RS16950 PF04002 RadC-like JAB domain RD1_RS16955 PF00920 Dehydratase family RD1_RS16960 PF14333 RD1_RS16960 RD1_RS16965 PF01546 Peptidase family M20/M25/M40 RD1_RS16965 PF07687 Peptidase dimerisation domain RD1_RS16970 PF00183 Hsp90 protein RD1_RS16970 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RD1_RS16980 PF00027 Cyclic nucleotide-binding domain RD1_RS16980 PF00999 Sodium/hydrogen exchanger family RD1_RS16985 PF06325 Ribosomal protein L11 methyltransferase (PrmA) RD1_RS16990 PF00563 EAL domain RD1_RS16990 PF00990 GGDEF domain RD1_RS16990 PF13426 PAS domain RD1_RS16995 PF02733 Dak1 domain RD1_RS16995 PF02734 DAK2 domain RD1_RS17000 PF01408 Oxidoreductase family, NAD-binding Rossmann fold RD1_RS17000 PF02894 Oxidoreductase family, C-terminal alpha/beta domain RD1_RS17005 PF00370 FGGY family of carbohydrate kinases, N-terminal domain RD1_RS17005 PF02782 FGGY family of carbohydrate kinases, C-terminal domain RD1_RS17015 PF12680 SnoaL-like domain RD1_RS17015 PF13738 Pyridine nucleotide-disulphide oxidoreductase RD1_RS17030 PF13577 SnoaL-like domain RD1_RS17035 PF08282 haloacid dehalogenase-like hydrolase RD1_RS17045 PF00128 Alpha amylase, catalytic domain RD1_RS17050 PF08450 SMP-30/Gluconolaconase/LRE-like region RD1_RS17055 PF03188 Eukaryotic cytochrome b561 RD1_RS17060 PF00528 Binding-protein-dependent transport system inner membrane component RD1_RS17065 PF00528 Binding-protein-dependent transport system inner membrane component RD1_RS17070 PF01547 Bacterial extracellular solute-binding protein RD1_RS17075 PF00005 ABC transporter RD1_RS17075 PF08402 TOBE domain RD1_RS17080 PF00356 Bacterial regulatory proteins, lacI family RD1_RS17080 PF13377 Periplasmic binding protein-like domain RD1_RS17085 PF07691 PA14 domain RD1_RS17090 PF00005 ABC transporter RD1_RS17090 PF00664 ABC transporter transmembrane region RD1_RS17095 PF00005 ABC transporter RD1_RS17095 PF00664 ABC transporter transmembrane region RD1_RS17100 PF13437 HlyD family secretion protein RD1_RS17100 PF13533 Biotin-lipoyl like RD1_RS17105 PF03109 RD1_RS17105 RD1_RS17115 PF00924 Mechanosensitive ion channel RD1_RS17135 PF00294 pfkB family carbohydrate kinase RD1_RS17140 PF05025 RbsD / FucU transport protein family RD1_RS17145 PF00005 ABC transporter RD1_RS17145 PF08402 TOBE domain RD1_RS17150 PF10518 TAT (twin-arginine translocation) pathway signal sequence RD1_RS17155 PF04945 YHS domain RD1_RS17165 PF00528 Binding-protein-dependent transport system inner membrane component RD1_RS17170 PF00528 Binding-protein-dependent transport system inner membrane component RD1_RS17180 PF13557 RD1_RS17180 RD1_RS17185 PF06742 Protein of unknown function (DUF1214) RD1_RS17185 PF06863 Protein of unknown function (DUF1254) RD1_RS17195 PF00027 Cyclic nucleotide-binding domain RD1_RS17200 PF02574 Homocysteine S-methyltransferase RD1_RS17205 PF00248 Aldo/keto reductase family RD1_RS17210 PF13561 Enoyl-(Acyl carrier protein) reductase RD1_RS17220 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RD1_RS17220 PF03466 LysR substrate binding domain RD1_RS17225 PF00370 FGGY family of carbohydrate kinases, N-terminal domain RD1_RS17225 PF02782 FGGY family of carbohydrate kinases, C-terminal domain RD1_RS17230 PF00248 Aldo/keto reductase family RD1_RS17235 PF04909 Amidohydrolase RD1_RS17240 PF00294 pfkB family carbohydrate kinase RD1_RS17245 PF01261 Xylose isomerase-like TIM barrel RD1_RS17260 PF05990 Alpha/beta hydrolase of unknown function (DUF900) RD1_RS17265 PF00582 Universal stress protein family RD1_RS17270 PF03480 Bacterial extracellular solute-binding protein, family 7 RD1_RS17275 PF04290 RD1_RS17275 RD1_RS17280 PF06808 RD1_RS17280 RD1_RS17285 PF02627 Carboxymuconolactone decarboxylase family RD1_RS17290 PF00775 Dioxygenase RD1_RS17290 PF12391 Protocatechuate 3,4-dioxygenase beta subunit N terminal RD1_RS17295 PF00775 Dioxygenase RD1_RS17300 PF02685 Glucokinase RD1_RS17305 PF13410 Glutathione S-transferase, C-terminal domain RD1_RS17305 PF13417 Glutathione S-transferase, N-terminal domain RD1_RS17310 PF00155 Aminotransferase class I and II RD1_RS17315 PF01989 Protein of unknown function DUF126 RD1_RS17320 PF04412 RD1_RS17320 RD1_RS17325 PF12833 Helix-turn-helix domain RD1_RS17330 PF01261 Xylose isomerase-like TIM barrel RD1_RS17335 PF00596 Class II Aldolase and Adducin N-terminal domain RD1_RS17340 PF07005 Protein of unknown function, DUF1537 RD1_RS17340 PF17042 RD1_RS17340 RD1_RS17345 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase RD1_RS17345 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase RD1_RS17350 PF00392 Bacterial regulatory proteins, gntR family RD1_RS17350 PF07729 FCD domain RD1_RS17355 PF01408 Oxidoreductase family, NAD-binding Rossmann fold RD1_RS17355 PF02894 Oxidoreductase family, C-terminal alpha/beta domain RD1_RS17360 PF00180 Isocitrate/isopropylmalate dehydrogenase RD1_RS17365 PF03992 Antibiotic biosynthesis monooxygenase RD1_RS17370 PF00753 Metallo-beta-lactamase superfamily RD1_RS17375 PF01774 UreD urease accessory protein RD1_RS17380 PF00547 Urease, gamma subunit RD1_RS17385 PF00699 Urease beta subunit RD1_RS17390 PF04199 Putative cyclase RD1_RS17390 PF10518 TAT (twin-arginine translocation) pathway signal sequence RD1_RS17395 PF02627 Carboxymuconolactone decarboxylase family RD1_RS17400 PF00449 Urease alpha-subunit, N-terminal domain RD1_RS17400 PF01979 Amidohydrolase family RD1_RS17410 PF02814 UreE urease accessory protein, N-terminal domain RD1_RS17410 PF05194 UreE urease accessory protein, C-terminal domain RD1_RS17415 PF01730 UreF RD1_RS17420 PF02492 CobW/HypB/UreG, nucleotide-binding domain RD1_RS17425 PF00107 Zinc-binding dehydrogenase RD1_RS17425 PF08240 Alcohol dehydrogenase GroES-like domain RD1_RS17430 PF00356 Bacterial regulatory proteins, lacI family RD1_RS17430 PF13377 Periplasmic binding protein-like domain RD1_RS17435 PF00815 Histidinol dehydrogenase RD1_RS17440 PF13561 Enoyl-(Acyl carrier protein) reductase RD1_RS17445 PF00107 Zinc-binding dehydrogenase RD1_RS17445 PF08240 Alcohol dehydrogenase GroES-like domain RD1_RS17450 PF00582 Universal stress protein family RD1_RS17455 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain RD1_RS17460 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain RD1_RS17465 PF01070 FMN-dependent dehydrogenase RD1_RS17470 PF00881 Nitroreductase family RD1_RS17475 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases RD1_RS17480 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases RD1_RS17485 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain RD1_RS17485 PF07685 CobB/CobQ-like glutamine amidotransferase domain RD1_RS17490 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases RD1_RS17495 PF01890 Cobalamin synthesis G C-terminus RD1_RS17500 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases RD1_RS17505 PF02571 RD1_RS17505 RD1_RS17510 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases RD1_RS17515 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases RD1_RS17520 PF02570 Precorrin-8X methylmutase RD1_RS17525 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain RD1_RS17530 PF02514 RD1_RS17530 RD1_RS17535 PF02492 CobW/HypB/UreG, nucleotide-binding domain RD1_RS17535 PF07683 Cobalamin synthesis protein cobW C-terminal domain RD1_RS17540 PF07845 RD1_RS17540 RD1_RS17545 PF00871 Acetokinase family RD1_RS17550 PF13091 PLD-like domain RD1_RS17550 PF13396 RD1_RS17550 RD1_RS17555 PF03372 Endonuclease/Exonuclease/phosphatase family RD1_RS17565 PF02706 Chain length determinant protein RD1_RS17565 PF13614 AAA domain RD1_RS17570 PF00685 Sulfotransferase domain RD1_RS17580 PF14667 Polysaccharide biosynthesis C-terminal domain RD1_RS17585 PF13469 Sulfotransferase family RD1_RS17590 PF02563 Polysaccharide biosynthesis/export protein RD1_RS17595 PF13229 Right handed beta helix region RD1_RS17600 PF14907 Uncharacterised nucleotidyltransferase RD1_RS17605 PF00534 Glycosyl transferases group 1 RD1_RS17605 PF13579 Glycosyl transferase 4-like domain RD1_RS17620 PF00733 Asparagine synthase RD1_RS17620 PF13537 Glutamine amidotransferase domain RD1_RS17625 PF13471 RD1_RS17625 RD1_RS17630 PF05402 Coenzyme PQQ synthesis protein D (PqqD) RD1_RS17635 PF00005 ABC transporter RD1_RS17640 PF02397 RD1_RS17640 RD1_RS17645 PF01381 Helix-turn-helix RD1_RS17645 PF07883 Cupin domain RD1_RS17660 PF01571 Aminomethyltransferase folate-binding domain RD1_RS17660 PF08669 Glycine cleavage T-protein C-terminal barrel domain RD1_RS17660 PF09347 Domain of unknown function (DUF1989) RD1_RS17665 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain RD1_RS17665 PF13378 Enolase C-terminal domain-like RD1_RS17670 PF00732 GMC oxidoreductase RD1_RS17670 PF05199 GMC oxidoreductase RD1_RS17675 PF00528 Binding-protein-dependent transport system inner membrane component RD1_RS17680 PF00528 Binding-protein-dependent transport system inner membrane component RD1_RS17685 PF00005 ABC transporter RD1_RS17685 PF08402 TOBE domain RD1_RS17690 PF13416 Bacterial extracellular solute-binding protein RD1_RS17695 PF01266 FAD dependent oxidoreductase RD1_RS17700 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RD1_RS17700 PF03466 LysR substrate binding domain RD1_RS17705 PF16867 RD1_RS17705 RD1_RS17710 PF12833 Helix-turn-helix domain RD1_RS17725 PF00296 Luciferase-like monooxygenase RD1_RS17730 PF00106 short chain dehydrogenase RD1_RS17735 PF01261 Xylose isomerase-like TIM barrel RD1_RS17740 PF01261 Xylose isomerase-like TIM barrel RD1_RS17745 PF01408 Oxidoreductase family, NAD-binding Rossmann fold RD1_RS17745 PF02894 Oxidoreductase family, C-terminal alpha/beta domain RD1_RS17750 PF08547 Complex I intermediate-associated protein 30 (CIA30) RD1_RS17755 PF00294 pfkB family carbohydrate kinase RD1_RS17765 PF00005 ABC transporter RD1_RS17765 PF08402 TOBE domain RD1_RS17770 PF00528 Binding-protein-dependent transport system inner membrane component RD1_RS17775 PF00528 Binding-protein-dependent transport system inner membrane component RD1_RS17780 PF01547 Bacterial extracellular solute-binding protein RD1_RS17785 PF00005 ABC transporter RD1_RS17785 PF08402 TOBE domain RD1_RS17790 PF01261 Xylose isomerase-like TIM barrel RD1_RS17790 PF07582 AP endonuclease family 2 C terminus RD1_RS17795 PF00356 Bacterial regulatory proteins, lacI family RD1_RS17795 PF13407 Periplasmic binding protein domain RD1_RS17800 PF05025 RbsD / FucU transport protein family RD1_RS17805 PF02733 Dak1 domain RD1_RS17805 PF02734 DAK2 domain RD1_RS17810 PF03937 Flavinator of succinate dehydrogenase RD1_RS17815 PF01381 Helix-turn-helix RD1_RS17820 PF00155 Aminotransferase class I and II RD1_RS17825 PF01926 50S ribosome-binding GTPase RD1_RS17825 PF06071 Protein of unknown function (DUF933) RD1_RS17835 PF00290 Tryptophan synthase alpha chain RD1_RS17840 PF01070 FMN-dependent dehydrogenase RD1_RS17845 PF07690 Major Facilitator Superfamily RD1_RS17850 PF01386 Ribosomal L25p family RD1_RS17850 PF14693 Ribosomal protein TL5, C-terminal domain RD1_RS17855 PF01195 Peptidyl-tRNA hydrolase RD1_RS17860 PF10094 RD1_RS17860 RD1_RS17865 PF00144 Beta-lactamase RD1_RS17880 PF00291 Pyridoxal-phosphate dependent enzyme RD1_RS17890 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase RD1_RS17895 PF06305 RD1_RS17895 RD1_RS17900 PF00216 Bacterial DNA-binding protein RD1_RS17905 PF00575 S1 RNA binding domain RD1_RS17915 PF02224 Cytidylate kinase RD1_RS17920 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) RD1_RS17925 PF02390 Putative methyltransferase RD1_RS17930 PF00438 S-adenosylmethionine synthetase, N-terminal domain RD1_RS17930 PF02772 S-adenosylmethionine synthetase, central domain RD1_RS17930 PF02773 S-adenosylmethionine synthetase, C-terminal domain RD1_RS17935 PF00795 Carbon-nitrogen hydrolase RD1_RS17940 PF00571 CBS domain RD1_RS17940 PF03471 Transporter associated domain RD1_RS17945 PF02130 Uncharacterized protein family UPF0054 RD1_RS17950 PF02562 PhoH-like protein RD1_RS17955 PF00919 Uncharacterized protein family UPF0004 RD1_RS17955 PF01938 TRAM domain RD1_RS17955 PF04055 Radical SAM superfamily RD1_RS17960 PF01475 Ferric uptake regulator family RD1_RS17965 PF07977 FabA-like domain RD1_RS17970 PF00109 Beta-ketoacyl synthase, N-terminal domain RD1_RS17970 PF02801 Beta-ketoacyl synthase, C-terminal domain RD1_RS17975 PF13561 Enoyl-(Acyl carrier protein) reductase RD1_RS17985 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase RD1_RS17990 PF00702 haloacid dehalogenase-like hydrolase RD1_RS17995 PF12697 Alpha/beta hydrolase family RD1_RS18000 PF00291 Pyridoxal-phosphate dependent enzyme RD1_RS18005 PF12697 Alpha/beta hydrolase family RD1_RS18010 PF12697 Alpha/beta hydrolase family RD1_RS18015 PF00206 Lyase RD1_RS18020 PF07690 Major Facilitator Superfamily RD1_RS18025 PF00107 Zinc-binding dehydrogenase RD1_RS18025 PF08240 Alcohol dehydrogenase GroES-like domain RD1_RS18030 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain RD1_RS18030 PF13378 Enolase C-terminal domain-like RD1_RS18035 PF03737 Demethylmenaquinone methyltransferase RD1_RS18040 PF01717 Cobalamin-independent synthase, Catalytic domain RD1_RS18045 PF07883 Cupin domain RD1_RS18050 PF07366 SnoaL-like polyketide cyclase RD1_RS18055 PF00356 Bacterial regulatory proteins, lacI family RD1_RS18055 PF13377 Periplasmic binding protein-like domain RD1_RS18060 PF13561 Enoyl-(Acyl carrier protein) reductase RD1_RS18065 PF07366 SnoaL-like polyketide cyclase RD1_RS18070 PF00815 Histidinol dehydrogenase RD1_RS18075 PF07366 SnoaL-like polyketide cyclase RD1_RS18080 PF00528 Binding-protein-dependent transport system inner membrane component RD1_RS18085 PF00528 Binding-protein-dependent transport system inner membrane component RD1_RS18090 PF01547 Bacterial extracellular solute-binding protein RD1_RS18095 PF00005 ABC transporter RD1_RS18100 PF00441 Acyl-CoA dehydrogenase, C-terminal domain RD1_RS18100 PF02770 Acyl-CoA dehydrogenase, middle domain RD1_RS18100 PF02771 Acyl-CoA dehydrogenase, N-terminal domain RD1_RS18105 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RD1_RS18105 PF03466 LysR substrate binding domain RD1_RS18110 PF02586 Uncharacterised ACR, COG2135 RD1_RS18115 PF00149 Calcineurin-like phosphoesterase RD1_RS18115 PF02872 5'-nucleotidase, C-terminal domain RD1_RS18120 PF06108 Protein of unknown function (DUF952) RD1_RS18125 PF01180 Dihydroorotate dehydrogenase RD1_RS18130 PF01554 MatE RD1_RS18135 PF03061 Thioesterase superfamily RD1_RS18140 PF03061 Thioesterase superfamily RD1_RS18145 PF00376 MerR family regulatory protein RD1_RS18145 PF09278 MerR, DNA binding RD1_RS18155 PF00196 Bacterial regulatory proteins, luxR family RD1_RS18155 PF03472 Autoinducer binding domain RD1_RS18160 PF00376 MerR family regulatory protein RD1_RS18160 PF09278 MerR, DNA binding RD1_RS18165 PF00441 Acyl-CoA dehydrogenase, C-terminal domain RD1_RS18165 PF02770 Acyl-CoA dehydrogenase, middle domain RD1_RS18165 PF02771 Acyl-CoA dehydrogenase, N-terminal domain RD1_RS18165 PF12418 RD1_RS18165 RD1_RS18165 PF12806 RD1_RS18165 RD1_RS18170 PF00441 Acyl-CoA dehydrogenase, C-terminal domain RD1_RS18170 PF02770 Acyl-CoA dehydrogenase, middle domain RD1_RS18170 PF02771 Acyl-CoA dehydrogenase, N-terminal domain RD1_RS18175 PF00043 Glutathione S-transferase, C-terminal domain RD1_RS18175 PF02798 Glutathione S-transferase, N-terminal domain RD1_RS18180 PF00108 Thiolase, N-terminal domain RD1_RS18180 PF02803 Thiolase, C-terminal domain RD1_RS18185 PF00378 Enoyl-CoA hydratase/isomerase family RD1_RS18185 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain RD1_RS18185 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain RD1_RS18190 PF00501 AMP-binding enzyme RD1_RS18190 PF13193 AMP-binding enzyme C-terminal domain RD1_RS18200 PF14681 Uracil phosphoribosyltransferase RD1_RS18205 PF01676 Metalloenzyme superfamily RD1_RS18210 PF00591 Glycosyl transferase family, a/b domain RD1_RS18210 PF02885 Glycosyl transferase family, helical bundle domain RD1_RS18210 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain RD1_RS18215 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region RD1_RS18240 PF00501 AMP-binding enzyme RD1_RS18240 PF13193 AMP-binding enzyme C-terminal domain RD1_RS18240 PF16177 RD1_RS18240 RD1_RS18245 PF05532 CsbD-like RD1_RS18250 PF04422 Coenzyme F420 hydrogenase/dehydrogenase, beta subunit N-term RD1_RS18250 PF04432 Coenzyme F420 hydrogenase/dehydrogenase, beta subunit C terminus RD1_RS18255 PF01513 ATP-NAD kinase RD1_RS18260 PF00464 Serine hydroxymethyltransferase RD1_RS18265 PF06808 RD1_RS18265 RD1_RS18270 PF04290 RD1_RS18270 RD1_RS18275 PF03480 Bacterial extracellular solute-binding protein, family 7 RD1_RS18280 PF07883 Cupin domain RD1_RS18285 PF13561 Enoyl-(Acyl carrier protein) reductase RD1_RS18290 PF00392 Bacterial regulatory proteins, gntR family RD1_RS18290 PF07729 FCD domain RD1_RS18295 PF00353 Hemolysin-type calcium-binding repeat (2 copies) RD1_RS18300 PF04542 Sigma-70 region 2 RD1_RS18300 PF08281 Sigma-70, region 4 RD1_RS18310 PF00082 Subtilase family RD1_RS18315 PF01297 Periplasmic solute binding protein family RD1_RS18320 PF01475 Ferric uptake regulator family RD1_RS18325 PF00005 ABC transporter RD1_RS18330 PF00950 RD1_RS18330 RD1_RS18335 PF01841 Transglutaminase-like superfamily RD1_RS18340 PF00227 Proteasome subunit RD1_RS18350 PF00565 Staphylococcal nuclease homologue RD1_RS18355 PF00009 Elongation factor Tu GTP binding domain RD1_RS18355 PF03143 Elongation factor Tu C-terminal domain RD1_RS18355 PF03144 Elongation factor Tu domain 2 RD1_RS18360 PF00009 Elongation factor Tu GTP binding domain RD1_RS18360 PF00679 Elongation factor G C-terminus RD1_RS18360 PF03144 Elongation factor Tu domain 2 RD1_RS18360 PF03764 Elongation factor G, domain IV RD1_RS18360 PF14492 Elongation Factor G, domain II RD1_RS18365 PF00177 Ribosomal protein S7p/S5e RD1_RS18370 PF00164 Ribosomal protein S12/S23 RD1_RS18375 PF00892 EamA-like transporter family RD1_RS18380 PF00623 RNA polymerase Rpb1, domain 2 RD1_RS18380 PF04983 RNA polymerase Rpb1, domain 3 RD1_RS18380 PF04997 RNA polymerase Rpb1, domain 1 RD1_RS18380 PF04998 RNA polymerase Rpb1, domain 5 RD1_RS18380 PF05000 RNA polymerase Rpb1, domain 4 RD1_RS18390 PF00562 RNA polymerase Rpb2, domain 6 RD1_RS18390 PF04560 RNA polymerase Rpb2, domain 7 RD1_RS18390 PF04561 RNA polymerase Rpb2, domain 2 RD1_RS18390 PF04563 RNA polymerase beta subunit RD1_RS18390 PF04565 RNA polymerase Rpb2, domain 3 RD1_RS18390 PF10385 RNA polymerase beta subunit external 1 domain RD1_RS18395 PF00542 Ribosomal protein L7/L12 C-terminal domain RD1_RS18395 PF16320 RD1_RS18395 RD1_RS18400 PF00466 Ribosomal protein L10 RD1_RS18405 PF00687 Ribosomal protein L1p/L10e family RD1_RS18410 PF00298 Ribosomal protein L11, RNA binding domain RD1_RS18410 PF03946 Ribosomal protein L11, N-terminal domain RD1_RS18415 PF00467 KOW motif RD1_RS18415 PF02357 Transcription termination factor nusG RD1_RS18420 PF00584 SecE/Sec61-gamma subunits of protein translocation complex RD1_RS18435 PF00528 Binding-protein-dependent transport system inner membrane component RD1_RS18440 PF00005 ABC transporter RD1_RS18440 PF08402 TOBE domain RD1_RS18445 PF13343 Bacterial extracellular solute-binding protein RD1_RS18455 PF04264 YceI-like domain RD1_RS18460 PF04542 Sigma-70 region 2 RD1_RS18460 PF08281 Sigma-70, region 4 RD1_RS18480 PF13401 AAA domain RD1_RS18485 PF09299 Mu transposase, C-terminal RD1_RS18510 PF06527 RD1_RS18510 RD1_RS18515 PF05621 RD1_RS18515 RD1_RS18520 PF00665 Integrase core domain RD1_RS18520 PF09299 Mu transposase, C-terminal RD1_RS18535 PF02384 N-6 DNA Methylase RD1_RS18535 PF12161 HsdM N-terminal domain RD1_RS18545 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) RD1_RS18545 PF04851 Type III restriction enzyme, res subunit RD1_RS18570 PF00004 ATPase family associated with various cellular activities (AAA) RD1_RS18575 PF00317 Ribonucleotide reductase, all-alpha domain RD1_RS18575 PF01381 Helix-turn-helix RD1_RS18575 PF02867 Ribonucleotide reductase, barrel domain RD1_RS18580 PF07370 RD1_RS18580 RD1_RS18585 PF01634 ATP phosphoribosyltransferase RD1_RS18590 PF13393 Histidyl-tRNA synthetase RD1_RS18595 PF03129 Anticodon binding domain RD1_RS18595 PF13393 Histidyl-tRNA synthetase RD1_RS18600 PF04102 SlyX RD1_RS18605 PF02811 PHP domain RD1_RS18605 PF07733 Bacterial DNA polymerase III alpha subunit RD1_RS18605 PF14579 Helix-hairpin-helix motif RD1_RS18610 PF00111 2Fe-2S iron-sulfur cluster binding domain RD1_RS18610 PF00941 FAD binding domain in molybdopterin dehydrogenase RD1_RS18610 PF01799 [2Fe-2S] binding domain RD1_RS18610 PF03450 CO dehydrogenase flavoprotein C-terminal domain RD1_RS18615 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain RD1_RS18615 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase RD1_RS18620 PF02625 XdhC and CoxI family RD1_RS18620 PF13478 XdhC Rossmann domain RD1_RS18625 PF00005 ABC transporter RD1_RS18630 PF02653 RD1_RS18630 RD1_RS18635 PF02653 RD1_RS18635 RD1_RS18640 PF02608 Basic membrane protein RD1_RS18645 PF00582 Universal stress protein family RD1_RS18650 PF04107 Glutamate-cysteine ligase family 2(GCS2) RD1_RS18660 PF04452 RNA methyltransferase RD1_RS18665 PF01040 UbiA prenyltransferase family RD1_RS18670 PF00691 OmpA family RD1_RS18680 PF00582 Universal stress protein family RD1_RS18685 PF02391 MoaE protein RD1_RS18690 PF02597 ThiS family RD1_RS18695 PF01066 CDP-alcohol phosphatidyltransferase RD1_RS18705 PF13561 Enoyl-(Acyl carrier protein) reductase RD1_RS18710 PF01699 Sodium/calcium exchanger protein RD1_RS18720 PF01343 Peptidase family S49 RD1_RS18725 PF01061 RD1_RS18725 RD1_RS18730 PF00005 ABC transporter RD1_RS18735 PF00892 EamA-like transporter family RD1_RS18740 PF01205 Uncharacterized protein family UPF0029 RD1_RS18745 PF00107 Zinc-binding dehydrogenase RD1_RS18745 PF08240 Alcohol dehydrogenase GroES-like domain RD1_RS18750 PF06299 RD1_RS18750 RD1_RS18755 PF00111 2Fe-2S iron-sulfur cluster binding domain RD1_RS18755 PF13484 RD1_RS18755 RD1_RS18755 PF13486 RD1_RS18755 RD1_RS18760 PF00732 GMC oxidoreductase RD1_RS18760 PF05199 GMC oxidoreductase RD1_RS18765 PF03480 Bacterial extracellular solute-binding protein, family 7 RD1_RS18770 PF04290 RD1_RS18770 RD1_RS18775 PF06808 RD1_RS18775 RD1_RS18780 PF01614 Bacterial transcriptional regulator RD1_RS18785 PF01841 Transglutaminase-like superfamily RD1_RS18785 PF08379 RD1_RS18785 RD1_RS18790 PF04168 RD1_RS18790 RD1_RS18795 PF14403 RD1_RS18795 RD1_RS18800 PF08547 Complex I intermediate-associated protein 30 (CIA30) RD1_RS18805 PF07885 Ion channel RD1_RS18810 PF00582 Universal stress protein family RD1_RS18815 PF06808 RD1_RS18815 RD1_RS18815 PF11874 RD1_RS18815 RD1_RS18820 PF16868 RD1_RS18820 RD1_RS18825 PF01266 FAD dependent oxidoreductase RD1_RS18825 PF01571 Aminomethyltransferase folate-binding domain RD1_RS18825 PF08669 Glycine cleavage T-protein C-terminal barrel domain RD1_RS18825 PF16350 RD1_RS18825 RD1_RS18830 PF00202 Aminotransferase class-III RD1_RS18835 PF05569 BlaR1 peptidase M56 RD1_RS18840 PF03965 Penicillinase repressor RD1_RS18845 PF09928 RD1_RS18845 RD1_RS18850 PF00528 Binding-protein-dependent transport system inner membrane component RD1_RS18855 PF00528 Binding-protein-dependent transport system inner membrane component RD1_RS18860 PF00005 ABC transporter RD1_RS18860 PF08402 TOBE domain RD1_RS18865 PF00005 ABC transporter RD1_RS18870 PF01547 Bacterial extracellular solute-binding protein RD1_RS18880 PF08548 Peptidase M10 serralysin C terminal RD1_RS18885 PF13416 Bacterial extracellular solute-binding protein RD1_RS18890 PF00005 ABC transporter RD1_RS18890 PF08402 TOBE domain RD1_RS18895 PF00528 Binding-protein-dependent transport system inner membrane component RD1_RS18900 PF00528 Binding-protein-dependent transport system inner membrane component RD1_RS18905 PF13416 Bacterial extracellular solute-binding protein RD1_RS18910 PF00850 Histone deacetylase domain RD1_RS18915 PF13738 Pyridine nucleotide-disulphide oxidoreductase RD1_RS18920 PF01042 Endoribonuclease L-PSP RD1_RS18925 PF06267 Family of unknown function (DUF1028) RD1_RS18930 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RD1_RS18930 PF03466 LysR substrate binding domain RD1_RS18940 PF01546 Peptidase family M20/M25/M40 RD1_RS18940 PF07687 Peptidase dimerisation domain RD1_RS18945 PF10070 RD1_RS18945 RD1_RS18950 PF00361 NADH-Ubiquinone/plastoquinone (complex I), various chains RD1_RS18950 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus RD1_RS18955 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RD1_RS18955 PF03466 LysR substrate binding domain RD1_RS18960 PF01510 N-acetylmuramoyl-L-alanine amidase RD1_RS18965 PF06181 RD1_RS18965 RD1_RS18970 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RD1_RS18970 PF03466 LysR substrate binding domain RD1_RS18975 PF00576 HIUase/Transthyretin family RD1_RS18980 PF01522 Polysaccharide deacetylase RD1_RS18980 PF09349 OHCU decarboxylase RD1_RS18985 PF04115 Ureidoglycolate hydrolase RD1_RS18990 PF00860 Permease family RD1_RS19005 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily RD1_RS19010 PF00440 Bacterial regulatory proteins, tetR family RD1_RS19015 PF05853 Prokaryotic protein of unknown function (DUF849) RD1_RS19020 PF13561 Enoyl-(Acyl carrier protein) reductase RD1_RS19025 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain RD1_RS19025 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain RD1_RS19030 PF00106 short chain dehydrogenase RD1_RS19045 PF13508 Acetyltransferase (GNAT) domain RD1_RS19050 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases RD1_RS19050 PF10414 Sirohaem synthase dimerisation region RD1_RS19050 PF13241 Putative NAD(P)-binding RD1_RS19060 PF00384 Molybdopterin oxidoreductase RD1_RS19060 PF01568 Molydopterin dinucleotide binding domain RD1_RS19060 PF04324 BFD-like [2Fe-2S] binding domain RD1_RS19060 PF04879 Molybdopterin oxidoreductase Fe4S4 domain RD1_RS19065 PF13806 Rieske-like [2Fe-2S] domain RD1_RS19070 PF01077 Nitrite and sulphite reductase 4Fe-4S domain RD1_RS19070 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain RD1_RS19070 PF04324 BFD-like [2Fe-2S] binding domain RD1_RS19070 PF07992 Pyridine nucleotide-disulphide oxidoreductase RD1_RS19075 PF00005 ABC transporter RD1_RS19080 PF00528 Binding-protein-dependent transport system inner membrane component RD1_RS19085 PF13379 NMT1-like family RD1_RS19090 PF13379 NMT1-like family RD1_RS19095 PF00072 Response regulator receiver domain RD1_RS19095 PF03861 ANTAR domain RD1_RS19100 PF13302 Acetyltransferase (GNAT) domain RD1_RS19105 PF13671 AAA domain RD1_RS19120 PF10067 RD1_RS19120 RD1_RS19125 PF13489 Methyltransferase domain RD1_RS19130 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RD1_RS19130 PF03466 LysR substrate binding domain RD1_RS19145 PF14108 RD1_RS19145 RD1_RS19160 PF00474 Sodium:solute symporter family RD1_RS19165 PF05171 Haemin-degrading HemS RD1_RS19170 PF01497 Periplasmic binding protein RD1_RS19175 PF01032 FecCD transport family RD1_RS19180 PF00005 ABC transporter RD1_RS19185 PF03992 Antibiotic biosynthesis monooxygenase RD1_RS19190 PF00593 TonB dependent receptor RD1_RS19190 PF07715 TonB-dependent Receptor Plug Domain RD1_RS19205 PF01618 RD1_RS19205 RD1_RS19210 PF02472 Biopolymer transport protein ExbD/TolR RD1_RS19215 PF02472 Biopolymer transport protein ExbD/TolR RD1_RS19220 PF13103 TonB C terminal RD1_RS19225 PF04397 LytTr DNA-binding domain RD1_RS19230 PF00005 ABC transporter RD1_RS19235 PF01061 RD1_RS19235 RD1_RS19240 PF16363 RD1_RS19240 RD1_RS19250 PF03102 NeuB family RD1_RS19250 PF08666 SAF domain RD1_RS19255 PF04230 RD1_RS19255 RD1_RS19260 PF02348 Cytidylyltransferase RD1_RS19265 PF00563 EAL domain RD1_RS19265 PF00990 GGDEF domain RD1_RS19265 PF13426 PAS domain RD1_RS19270 PF13699 RD1_RS19270 RD1_RS19275 PF00497 Bacterial extracellular solute-binding proteins, family 3 RD1_RS19280 PF13649 Methyltransferase domain RD1_RS19285 PF14065 RD1_RS19285 RD1_RS19295 PF04984 Phage tail sheath protein RD1_RS19295 PF16184 RD1_RS19295 RD1_RS19300 PF06841 RD1_RS19300 RD1_RS19305 PF06841 RD1_RS19305 RD1_RS19320 PF05488 PAAR motif RD1_RS19325 PF04965 Gene 25-like lysozyme RD1_RS19355 PF00004 ATPase family associated with various cellular activities (AAA) RD1_RS19370 PF01257 Thioredoxin-like [2Fe-2S] ferredoxin RD1_RS19370 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit RD1_RS19370 PF10531 SLBB domain RD1_RS19370 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region RD1_RS19375 PF00384 Molybdopterin oxidoreductase RD1_RS19375 PF01568 Molydopterin dinucleotide binding domain RD1_RS19375 PF04879 Molybdopterin oxidoreductase Fe4S4 domain RD1_RS19375 PF12838 4Fe-4S dicluster domain RD1_RS19375 PF13510 2Fe-2S iron-sulfur cluster binding domain RD1_RS19380 PF01268 Formate--tetrahydrofolate ligase RD1_RS19385 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain RD1_RS19385 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain RD1_RS19390 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain RD1_RS19390 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain RD1_RS19395 PF00892 EamA-like transporter family RD1_RS19400 PF01152 Bacterial-like globin RD1_RS19405 PF05161 MOFRL family RD1_RS19405 PF13660 Domain of unknown function (DUF4147) RD1_RS19410 PF03328 HpcH/HpaI aldolase/citrate lyase family RD1_RS19415 PF00072 Response regulator receiver domain RD1_RS19415 PF00196 Bacterial regulatory proteins, luxR family RD1_RS19420 PF00266 Aminotransferase class-V RD1_RS19425 PF00549 CoA-ligase RD1_RS19425 PF08442 ATP-grasp domain RD1_RS19430 PF00549 CoA-ligase RD1_RS19430 PF02629 CoA binding domain RD1_RS19435 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain RD1_RS19435 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain RD1_RS19440 PF00311 Phosphoenolpyruvate carboxylase RD1_RS19445 PF00464 Serine hydroxymethyltransferase RD1_RS19450 PF00120 Glutamine synthetase, catalytic domain RD1_RS19455 PF01645 Conserved region in glutamate synthase RD1_RS19460 PF01493 GXGXG motif RD1_RS19465 PF13522 Glutamine amidotransferase domain RD1_RS19515 PF01571 Aminomethyltransferase folate-binding domain RD1_RS19995 PF11927 RD1_RS19995 RD1_RS20050 PF01266 FAD dependent oxidoreductase RD1_RS20050 PF01571 Aminomethyltransferase folate-binding domain RD1_RS20050 PF16350 RD1_RS20050 RD1_RS20065 PF01571 Aminomethyltransferase folate-binding domain RD1_RS20065 PF16350 RD1_RS20065 RD1_RS20085 PF00108 Thiolase, N-terminal domain RD1_RS20085 PF02803 Thiolase, C-terminal domain RD1_RS20275 PF00909 Ammonium Transporter Family RD1_RS20365 PF01571 Aminomethyltransferase folate-binding domain RD1_RS20365 PF08669 Glycine cleavage T-protein C-terminal barrel domain RD1_RS20400 PF00924 Mechanosensitive ion channel RD1_RS20405 PF10123 RD1_RS20405 RD1_RS20410 PF05990 Alpha/beta hydrolase of unknown function (DUF900) RD1_RS20415 PF07784 RD1_RS20415 RD1_RS20420 PF00188 Cysteine-rich secretory protein family RD1_RS20425 PF00512 His Kinase A (phospho-acceptor) domain RD1_RS20425 PF00672 HAMP domain RD1_RS20425 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RD1_RS20435 PF00415 Regulator of chromosome condensation (RCC1) repeat RD1_RS20440 PF13205 Bacterial Ig-like domain RD1_RS20440 PF13540 Regulator of chromosome condensation (RCC1) repeat RD1_RS20445 PF06718 RD1_RS20445 RD1_RS20450 PF13563 2'-5' RNA ligase superfamily RD1_RS20455 PF00805 Pentapeptide repeats (8 copies) RD1_RS20470 PF00353 Hemolysin-type calcium-binding repeat (2 copies) RD1_RS20475 PF04076 Bacterial OB fold (BOF) protein RD1_RS20480 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain RD1_RS20485 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain RD1_RS20485 PF00672 HAMP domain RD1_RS20485 PF13188 PAS domain RD1_RS20485 PF13426 PAS domain RD1_RS20490 PF00353 Hemolysin-type calcium-binding repeat (2 copies) RD1_RS20550 PF00884 Sulfatase RD1_RS20560 PF01493 GXGXG motif RD1_RS20560 PF01645 Conserved region in glutamate synthase