locus-tag class description JR346_RS00005 PF00308 Bacterial dnaA protein JR346_RS00005 PF08299 Bacterial dnaA protein helix-turn-helix JR346_RS00010 PF02768 DNA polymerase III beta subunit, C-terminal domain JR346_RS00010 PF02767 DNA polymerase III beta subunit, central domain JR346_RS00010 PF00712 DNA polymerase III beta subunit, N-terminal domain JR346_RS00015 PF02463 RecF/RecN/SMC N terminal domain JR346_RS00025 PF01751 Toprim domain JR346_RS00025 PF00986 DNA gyrase B subunit, carboxyl terminus JR346_RS00025 PF00204 DNA gyrase B JR346_RS00025 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JR346_RS00030 PF00521 DNA gyrase/topoisomerase IV, subunit A JR346_RS00030 PF03989 DNA gyrase C-terminal domain, beta-propeller JR346_RS00055 PF00005 ABC transporter JR346_RS00070 PF02687 FtsX-like permease family JR346_RS00070 PF00005 ABC transporter JR346_RS00070 PF12704 MacB-like periplasmic core domain JR346_RS00075 PF00005 ABC transporter JR346_RS00075 PF02687 FtsX-like permease family JR346_RS00075 PF12704 MacB-like periplasmic core domain JR346_RS00080 PF01384 Phosphate transporter family JR346_RS00115 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD JR346_RS00130 PF03073 TspO/MBR family JR346_RS00135 PF08501 Shikimate dehydrogenase substrate binding domain JR346_RS00140 PF00462 Glutaredoxin JR346_RS00155 PF08544 GHMP kinases C terminal JR346_RS00155 PF10509 Galactokinase galactose-binding signature JR346_RS00155 PF00288 GHMP kinases N terminal domain JR346_RS00160 PF00440 Bacterial regulatory proteins, tetR family JR346_RS00190 PF05199 GMC oxidoreductase JR346_RS00190 PF00732 GMC oxidoreductase JR346_RS00205 PF02537 CrcB-like protein, Camphor Resistance (CrcB) JR346_RS00220 PF00324 Amino acid permease JR346_RS00230 PF01546 Peptidase family M20/M25/M40 JR346_RS00230 PF07687 Peptidase dimerisation domain JR346_RS00235 PF01613 Flavin reductase like domain JR346_RS00245 PF02447 GntP family permease JR346_RS00255 PF00535 Glycosyl transferase family 2 JR346_RS00275 PF00535 Glycosyl transferase family 2 JR346_RS00305 PF07690 Major Facilitator Superfamily JR346_RS00305 PF00083 Sugar (and other) transporter JR346_RS00320 PF08501 Shikimate dehydrogenase substrate binding domain JR346_RS00320 PF03435 Saccharopine dehydrogenase NADP binding domain JR346_RS00320 PF18317 Shikimate 5'-dehydrogenase C-terminal domain JR346_RS00325 PF05088 Bacterial NAD-glutamate dehydrogenase JR346_RS00345 PF00313 'Cold-shock' DNA-binding domain JR346_RS00365 PF08903 Domain of unknown function (DUF1846) JR346_RS00370 PF01145 SPFH domain / Band 7 family JR346_RS00380 PF04851 Type III restriction enzyme, res subunit JR346_RS00380 PF00271 Helicase conserved C-terminal domain JR346_RS00400 PF01174 SNO glutamine amidotransferase family JR346_RS00405 PF01680 SOR/SNZ family JR346_RS00410 PF00392 Bacterial regulatory proteins, gntR family JR346_RS00435 PF08281 Sigma-70, region 4 JR346_RS00435 PF04542 Sigma-70 region 2 JR346_RS00445 PF00403 Heavy-metal-associated domain JR346_RS00455 PF02583 Metal-sensitive transcriptional repressor JR346_RS00460 PF00723 Glycosyl hydrolases family 15 JR346_RS00470 PF04542 Sigma-70 region 2 JR346_RS00470 PF04545 Sigma-70, region 4 JR346_RS00485 PF13593 SBF-like CPA transporter family (DUF4137) JR346_RS00490 PF00005 ABC transporter JR346_RS00490 PF17912 MalK OB fold domain JR346_RS00495 PF01435 Peptidase family M48 JR346_RS00505 PF00871 Acetokinase family JR346_RS00510 PF07085 DRTGG domain JR346_RS00510 PF01515 Phosphate acetyl/butaryl transferase JR346_RS00515 PF07732 Multicopper oxidase JR346_RS00515 PF07731 Multicopper oxidase JR346_RS00535 PF02810 SEC-C motif JR346_RS00560 PF00196 Bacterial regulatory proteins, luxR family JR346_RS00560 PF00072 Response regulator receiver domain JR346_RS00565 PF00860 Permease family JR346_RS00575 PF07992 Pyridine nucleotide-disulphide oxidoreductase JR346_RS00580 PF04030 D-arabinono-1,4-lactone oxidase JR346_RS00580 PF01565 FAD binding domain JR346_RS00590 PF00582 Universal stress protein family JR346_RS00610 PF13443 Cro/C1-type HTH DNA-binding domain JR346_RS00625 PF00378 Enoyl-CoA hydratase/isomerase JR346_RS00630 PF00378 Enoyl-CoA hydratase/isomerase JR346_RS00640 PF02634 FdhD/NarQ family JR346_RS00645 PF00384 Molybdopterin oxidoreductase JR346_RS00645 PF01568 Molydopterin dinucleotide binding domain JR346_RS00650 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain JR346_RS00650 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain JR346_RS00660 PF00294 pfkB family carbohydrate kinase JR346_RS00665 PF01161 Phosphatidylethanolamine-binding protein JR346_RS00680 PF00860 Permease family JR346_RS00685 PF04039 Domain related to MnhB subunit of Na+/H+ antiporter JR346_RS00685 PF13244 Domain of unknown function (DUF4040) JR346_RS00685 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus JR346_RS00685 PF00361 Proton-conducting membrane transporter JR346_RS00690 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L JR346_RS00695 PF00361 Proton-conducting membrane transporter JR346_RS00705 PF04066 Multiple resistance and pH regulation protein F (MrpF / PhaF) JR346_RS00710 PF03334 Na+/H+ antiporter subunit JR346_RS00715 PF00854 POT family JR346_RS00720 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II JR346_RS00720 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III JR346_RS00720 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain JR346_RS00720 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I JR346_RS00725 PF17773 UPF0176 acylphosphatase like domain JR346_RS00725 PF12368 Rhodanase C-terminal JR346_RS00725 PF00581 Rhodanese-like domain JR346_RS00730 PF04715 Anthranilate synthase component I, N terminal region JR346_RS00730 PF00425 chorismate binding enzyme JR346_RS00730 PF00117 Glutamine amidotransferase class-I JR346_RS00735 PF00005 ABC transporter JR346_RS00760 PF00156 Phosphoribosyl transferase domain JR346_RS00765 PF02527 rRNA small subunit methyltransferase G JR346_RS00765 PF00588 SpoU rRNA Methylase family JR346_RS00775 PF13333 Integrase core domain JR346_RS00775 PF13276 HTH-like domain JR346_RS00775 PF00665 Integrase core domain JR346_RS00780 PF02384 N-6 DNA Methylase JR346_RS00795 PF00589 Phage integrase family JR346_RS00800 PF00665 Integrase core domain JR346_RS00800 PF13333 Integrase core domain JR346_RS00800 PF13276 HTH-like domain JR346_RS00815 PF00589 Phage integrase family JR346_RS00815 PF02899 Phage integrase, N-terminal SAM-like domain JR346_RS00840 PF00939 Sodium:sulfate symporter transmembrane region JR346_RS00845 PF01116 Fructose-bisphosphate aldolase class-II JR346_RS00855 PF01262 Alanine dehydrogenase/PNT, C-terminal domain JR346_RS00855 PF05222 Alanine dehydrogenase/PNT, N-terminal domain JR346_RS00875 PF01842 ACT domain JR346_RS00875 PF00800 Prephenate dehydratase JR346_RS00880 PF00781 Diacylglycerol kinase catalytic domain JR346_RS00885 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) JR346_RS00885 PF02403 Seryl-tRNA synthetase N-terminal domain JR346_RS00890 PF01645 Conserved region in glutamate synthase JR346_RS00895 PF01297 Zinc-uptake complex component A periplasmic JR346_RS00900 PF00005 ABC transporter JR346_RS00905 PF00950 ABC 3 transport family JR346_RS00965 PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family JR346_RS00975 PF09179 TilS substrate binding domain JR346_RS00975 PF01171 PP-loop family JR346_RS00980 PF00156 Phosphoribosyl transferase domain JR346_RS00985 PF00004 ATPase family associated with various cellular activities (AAA) JR346_RS00985 PF17862 AAA+ lid domain JR346_RS00985 PF01434 Peptidase family M41 JR346_RS00990 PF01227 GTP cyclohydrolase I JR346_RS00995 PF00809 Pterin binding enzyme JR346_RS01000 PF02152 Dihydroneopterin aldolase JR346_RS01005 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) JR346_RS01030 PF02569 Pantoate-beta-alanine ligase JR346_RS01035 PF00152 tRNA synthetases class II (D, K and N) JR346_RS01035 PF01336 OB-fold nucleic acid binding domain JR346_RS01050 PF07724 AAA domain (Cdc48 subfamily) JR346_RS01050 PF02861 Clp amino terminal domain, pathogenicity island component JR346_RS01050 PF10431 C-terminal, D2-small domain, of ClpB protein JR346_RS01050 PF17871 AAA lid domain JR346_RS01050 PF00004 ATPase family associated with various cellular activities (AAA) JR346_RS01070 PF00583 Acetyltransferase (GNAT) family JR346_RS01085 PF00633 Helix-hairpin-helix motif JR346_RS01085 PF00730 HhH-GPD superfamily base excision DNA repair protein JR346_RS01095 PF02457 DisA bacterial checkpoint controller nucleotide-binding JR346_RS01095 PF10635 DisA bacterial checkpoint controller linker region JR346_RS01095 PF00633 Helix-hairpin-helix motif JR346_RS01100 PF18073 Rubredoxin metal binding domain JR346_RS01100 PF06745 KaiC JR346_RS01110 PF12849 PBP superfamily domain JR346_RS01115 PF00528 Binding-protein-dependent transport system inner membrane component JR346_RS01120 PF00528 Binding-protein-dependent transport system inner membrane component JR346_RS01125 PF00005 ABC transporter JR346_RS01130 PF01384 Phosphate transporter family JR346_RS01180 PF10145 Phage-related minor tail protein JR346_RS01180 PF01464 Transglycosylase SLT domain JR346_RS01180 PF01551 Peptidase family M23 JR346_RS01240 PF01443 Viral (Superfamily 1) RNA helicase JR346_RS01240 PF03389 MobA/MobL family JR346_RS01240 PF17841 BID domain of Bartonella effector protein (Bep) JR346_RS01275 PF00082 Subtilase family JR346_RS01275 PF04151 Bacterial pre-peptidase C-terminal domain JR346_RS01290 PF00436 Single-strand binding protein family JR346_RS01300 PF13614 AAA domain JR346_RS01350 PF13651 Adenine-specific methyltransferase EcoRI JR346_RS01355 PF13651 Adenine-specific methyltransferase EcoRI JR346_RS01370 PF02899 Phage integrase, N-terminal SAM-like domain JR346_RS01370 PF00589 Phage integrase family JR346_RS01390 PF00710 Asparaginase, N-terminal JR346_RS01390 PF17763 Glutaminase/Asparaginase C-terminal domain JR346_RS01405 PF07690 Major Facilitator Superfamily JR346_RS01410 PF00270 DEAD/DEAH box helicase JR346_RS01410 PF00271 Helicase conserved C-terminal domain JR346_RS01410 PF00570 HRDC domain JR346_RS01410 PF09382 RQC domain JR346_RS01410 PF16124 RecQ zinc-binding JR346_RS01415 PF14437 MafB19-like deaminase JR346_RS01435 PF00486 Transcriptional regulatory protein, C terminal JR346_RS01440 PF00561 alpha/beta hydrolase fold JR346_RS01445 PF02028 BCCT, betaine/carnitine/choline family transporter JR346_RS01450 PF00581 Rhodanese-like domain JR346_RS01455 PF02657 Fe-S metabolism associated domain JR346_RS01465 PF07690 Major Facilitator Superfamily JR346_RS01470 PF04198 Putative sugar-binding domain JR346_RS01475 PF00107 Zinc-binding dehydrogenase JR346_RS01475 PF08240 Alcohol dehydrogenase GroES-like domain JR346_RS01480 PF02734 DAK2 domain JR346_RS01480 PF02733 Dak1 domain JR346_RS01485 PF02502 Ribose/Galactose Isomerase JR346_RS01490 PF08125 Mannitol dehydrogenase C-terminal domain JR346_RS01490 PF01232 Mannitol dehydrogenase Rossmann domain JR346_RS01495 PF00370 FGGY family of carbohydrate kinases, N-terminal domain JR346_RS01495 PF02782 FGGY family of carbohydrate kinases, C-terminal domain JR346_RS01505 PF02782 FGGY family of carbohydrate kinases, C-terminal domain JR346_RS01505 PF00370 FGGY family of carbohydrate kinases, N-terminal domain JR346_RS01520 PF00107 Zinc-binding dehydrogenase JR346_RS01520 PF08240 Alcohol dehydrogenase GroES-like domain JR346_RS01525 PF13722 5TM C-terminal transporter carbon starvation CstA JR346_RS01525 PF02554 Carbon starvation protein CstA JR346_RS01540 PF01757 Acyltransferase family JR346_RS01545 PF00196 Bacterial regulatory proteins, luxR family JR346_RS01545 PF00072 Response regulator receiver domain JR346_RS01550 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JR346_RS01550 PF00672 HAMP domain JR346_RS01550 PF07730 Histidine kinase JR346_RS01560 PF09383 NIL domain JR346_RS01560 PF00005 ABC transporter JR346_RS01565 PF03328 HpcH/HpaI aldolase/citrate lyase family JR346_RS01590 PF00795 Carbon-nitrogen hydrolase JR346_RS01595 PF00708 Acylphosphatase JR346_RS01625 PF08328 Adenylosuccinate lyase C-terminal JR346_RS01625 PF00206 Lyase JR346_RS01640 PF00155 Aminotransferase class I and II JR346_RS01645 PF00676 Dehydrogenase E1 component JR346_RS01650 PF02779 Transketolase, pyrimidine binding domain JR346_RS01650 PF02780 Transketolase, C-terminal domain JR346_RS01655 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) JR346_RS01655 PF02817 e3 binding domain JR346_RS01655 PF00364 Biotin-requiring enzyme JR346_RS01670 PF00196 Bacterial regulatory proteins, luxR family JR346_RS01670 PF00072 Response regulator receiver domain JR346_RS01680 PF14602 Hexapeptide repeat of succinyl-transferase JR346_RS01680 PF12464 Maltose acetyltransferase JR346_RS01690 PF00501 AMP-binding enzyme JR346_RS01690 PF13193 AMP-binding enzyme C-terminal domain JR346_RS01695 PF01979 Amidohydrolase family JR346_RS01700 PF07702 UTRA domain JR346_RS01700 PF00392 Bacterial regulatory proteins, gntR family JR346_RS01705 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase JR346_RS01720 PF04131 Putative N-acetylmannosamine-6-phosphate epimerase JR346_RS01725 PF00480 ROK family JR346_RS01730 PF00701 Dihydrodipicolinate synthetase family JR346_RS01735 PF00005 ABC transporter JR346_RS01735 PF08352 Oligopeptide/dipeptide transporter, C-terminal region JR346_RS01740 PF00005 ABC transporter JR346_RS01740 PF08352 Oligopeptide/dipeptide transporter, C-terminal region JR346_RS01745 PF00528 Binding-protein-dependent transport system inner membrane component JR346_RS01750 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle JR346_RS01760 PF03180 NLPA lipoprotein JR346_RS01765 PF00005 ABC transporter JR346_RS01765 PF09383 NIL domain JR346_RS01770 PF00528 Binding-protein-dependent transport system inner membrane component JR346_RS01780 PF13419 Haloacid dehalogenase-like hydrolase JR346_RS01785 PF00300 Histidine phosphatase superfamily (branch 1) JR346_RS01790 PF00300 Histidine phosphatase superfamily (branch 1) JR346_RS01800 PF08220 DeoR-like helix-turn-helix domain JR346_RS01800 PF00455 DeoR C terminal sensor domain JR346_RS01805 PF00294 pfkB family carbohydrate kinase JR346_RS01810 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit JR346_RS01815 PF02896 PEP-utilising enzyme, TIM barrel domain JR346_RS01815 PF00391 PEP-utilising enzyme, mobile domain JR346_RS01815 PF05524 PEP-utilising enzyme, N-terminal JR346_RS01840 PF03167 Uracil DNA glycosylase superfamily JR346_RS01855 PF00118 TCP-1/cpn60 chaperonin family JR346_RS01865 PF05958 tRNA (Uracil-5-)-methyltransferase JR346_RS01870 PF00425 chorismate binding enzyme JR346_RS01880 PF00075 RNase H JR346_RS01890 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JR346_RS01890 PF00672 HAMP domain JR346_RS01890 PF00512 His Kinase A (phospho-acceptor) domain JR346_RS01895 PF00486 Transcriptional regulatory protein, C terminal JR346_RS01895 PF00072 Response regulator receiver domain JR346_RS01905 PF11228 Protein of unknown function (DUF3027) JR346_RS01910 PF00266 Aminotransferase class-V JR346_RS01915 PF01325 Iron dependent repressor, N-terminal DNA binding domain JR346_RS01915 PF02742 Iron dependent repressor, metal binding and dimerisation domain JR346_RS01915 PF18357 Diphteria toxin repressor SH3 domain JR346_RS01920 PF00877 NlpC/P60 family JR346_RS01945 PF00580 UvrD/REP helicase N-terminal domain JR346_RS01945 PF13361 UvrD-like helicase C-terminal domain JR346_RS01955 PF08442 ATP-grasp domain JR346_RS01955 PF00549 CoA-ligase JR346_RS01960 PF02629 CoA binding domain JR346_RS01960 PF00549 CoA-ligase JR346_RS01975 PF00210 Ferritin-like domain JR346_RS01980 PF13419 Haloacid dehalogenase-like hydrolase JR346_RS01990 PF07724 AAA domain (Cdc48 subfamily) JR346_RS01990 PF17871 AAA lid domain JR346_RS01990 PF00004 ATPase family associated with various cellular activities (AAA) JR346_RS01990 PF10431 C-terminal, D2-small domain, of ClpB protein JR346_RS01990 PF02861 Clp amino terminal domain, pathogenicity island component JR346_RS01995 PF02146 Sir2 family JR346_RS02005 PF00005 ABC transporter JR346_RS02020 PF00586 AIR synthase related protein, N-terminal domain JR346_RS02020 PF02769 AIR synthase related protein, C-terminal domain JR346_RS02025 PF00156 Phosphoribosyl transferase domain JR346_RS02050 PF03176 MMPL family JR346_RS02060 PF02844 Phosphoribosylglycinamide synthetase, N domain JR346_RS02060 PF02843 Phosphoribosylglycinamide synthetase, C domain JR346_RS02060 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain JR346_RS02065 PF01259 SAICAR synthetase JR346_RS02070 PF07702 UTRA domain JR346_RS02070 PF00392 Bacterial regulatory proteins, gntR family JR346_RS02075 PF02652 L-lactate permease JR346_RS02080 PF02754 Cysteine-rich domain JR346_RS02085 PF11870 Domain of unknown function (DUF3390) JR346_RS02085 PF13183 4Fe-4S dicluster domain JR346_RS02085 PF02589 LUD domain JR346_RS02090 PF02589 LUD domain JR346_RS02105 PF03176 MMPL family JR346_RS02110 PF01758 Sodium Bile acid symporter family JR346_RS02120 PF01451 Low molecular weight phosphotyrosine protein phosphatase JR346_RS02135 PF00664 ABC transporter transmembrane region JR346_RS02135 PF00005 ABC transporter JR346_RS02140 PF00664 ABC transporter transmembrane region JR346_RS02140 PF00005 ABC transporter JR346_RS02150 PF00905 Penicillin binding protein transpeptidase domain JR346_RS02150 PF00912 Transglycosylase JR346_RS02170 PF13545 Crp-like helix-turn-helix domain JR346_RS02170 PF00027 Cyclic nucleotide-binding domain JR346_RS02175 PF12791 Anti-sigma factor N-terminus JR346_RS02180 PF01220 Dehydroquinase class II JR346_RS02185 PF16177 Acetyl-coenzyme A synthetase N-terminus JR346_RS02185 PF00501 AMP-binding enzyme JR346_RS02185 PF13193 AMP-binding enzyme C-terminal domain JR346_RS02190 PF00730 HhH-GPD superfamily base excision DNA repair protein JR346_RS02190 PF00633 Helix-hairpin-helix motif JR346_RS02190 PF10576 Iron-sulfur binding domain of endonuclease III JR346_RS02195 PF00293 NUDIX domain JR346_RS02205 PF00437 Type II/IV secretion system protein JR346_RS02240 PF00271 Helicase conserved C-terminal domain JR346_RS02240 PF09369 Domain of unknown function (DUF1998) JR346_RS02240 PF00270 DEAD/DEAH box helicase JR346_RS02255 PF00581 Rhodanese-like domain JR346_RS02255 PF12368 Rhodanase C-terminal JR346_RS02255 PF17773 UPF0176 acylphosphatase like domain JR346_RS02265 PF05175 Methyltransferase small domain JR346_RS02275 PF01131 DNA topoisomerase JR346_RS02275 PF01751 Toprim domain JR346_RS02275 PF13368 Topoisomerase C-terminal repeat JR346_RS02280 PF01261 Xylose isomerase-like TIM barrel JR346_RS02285 PF03807 NADP oxidoreductase coenzyme F420-dependent JR346_RS02285 PF14748 Pyrroline-5-carboxylate reductase dimerisation JR346_RS02290 PF02080 TrkA-C domain JR346_RS02290 PF02254 TrkA-N domain JR346_RS02295 PF02386 Cation transport protein JR346_RS02300 PF00850 Histone deacetylase domain JR346_RS02305 PF01022 Bacterial regulatory protein, arsR family JR346_RS02325 PF00300 Histidine phosphatase superfamily (branch 1) JR346_RS02330 PF00085 Thioredoxin JR346_RS02335 PF02683 Cytochrome C biogenesis protein transmembrane region JR346_RS02345 PF01578 Cytochrome C assembly protein JR346_RS02375 PF01040 UbiA prenyltransferase family JR346_RS02380 PF00501 AMP-binding enzyme JR346_RS02380 PF13193 AMP-binding enzyme C-terminal domain JR346_RS02385 PF08818 Domain of unknown function (DU1801) JR346_RS02410 PF12826 Helix-hairpin-helix motif JR346_RS02410 PF03120 NAD-dependent DNA ligase OB-fold domain JR346_RS02410 PF01653 NAD-dependent DNA ligase adenylation domain JR346_RS02410 PF00533 BRCA1 C Terminus (BRCT) domain JR346_RS02410 PF03119 NAD-dependent DNA ligase C4 zinc finger domain JR346_RS02415 PF00378 Enoyl-CoA hydratase/isomerase JR346_RS02420 PF00474 Sodium:solute symporter family JR346_RS02430 PF00749 tRNA synthetases class I (E and Q), catalytic domain JR346_RS02445 PF18374 Enolase N-terminal domain-like JR346_RS02445 PF13378 Enolase C-terminal domain-like JR346_RS02455 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain JR346_RS02455 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain JR346_RS02465 PF00005 ABC transporter JR346_RS02470 PF00528 Binding-protein-dependent transport system inner membrane component JR346_RS02475 PF00497 Bacterial extracellular solute-binding proteins, family 3 JR346_RS02480 PF01209 ubiE/COQ5 methyltransferase family JR346_RS02485 PF00348 Polyprenyl synthetase JR346_RS02490 PF00209 Sodium:neurotransmitter symporter family JR346_RS02500 PF00892 EamA-like transporter family JR346_RS02515 PF03176 MMPL family JR346_RS02520 PF00199 Catalase JR346_RS02520 PF06628 Catalase-related immune-responsive JR346_RS02525 PF01475 Ferric uptake regulator family JR346_RS02535 PF01435 Peptidase family M48 JR346_RS02540 PF04461 Protein of unknown function (DUF520) JR346_RS02550 PF00085 Thioredoxin JR346_RS02565 PF03880 DbpA RNA binding domain JR346_RS02565 PF00270 DEAD/DEAH box helicase JR346_RS02565 PF00271 Helicase conserved C-terminal domain JR346_RS02585 PF13452 N-terminal half of MaoC dehydratase JR346_RS02595 PF07690 Major Facilitator Superfamily JR346_RS02600 PF01565 FAD binding domain JR346_RS02600 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain JR346_RS02610 PF02774 Semialdehyde dehydrogenase, dimerisation domain JR346_RS02610 PF01118 Semialdehyde dehydrogenase, NAD binding domain JR346_RS02615 PF01381 Helix-turn-helix JR346_RS02625 PF00186 Dihydrofolate reductase JR346_RS02630 PF00303 Thymidylate synthase JR346_RS02635 PF01757 Acyltransferase family JR346_RS02640 PF00300 Histidine phosphatase superfamily (branch 1) JR346_RS02640 PF00293 NUDIX domain JR346_RS02645 PF13089 Polyphosphate kinase N-terminal domain JR346_RS02645 PF13090 Polyphosphate kinase C-terminal domain 2 JR346_RS02645 PF02503 Polyphosphate kinase middle domain JR346_RS02645 PF17941 Polyphosphate kinase C-terminal domain 1 JR346_RS02650 PF00583 Acetyltransferase (GNAT) family JR346_RS02655 PF00486 Transcriptional regulatory protein, C terminal JR346_RS02665 PF08768 Domain of unknown function (DUF1794) JR346_RS02670 PF01571 Aminomethyltransferase folate-binding domain JR346_RS02675 PF00365 Phosphofructokinase JR346_RS02680 PF00155 Aminotransferase class I and II JR346_RS02690 PF00584 SecE/Sec61-gamma subunits of protein translocation complex JR346_RS02695 PF02357 Transcription termination factor nusG JR346_RS02700 PF03946 Ribosomal protein L11, N-terminal domain JR346_RS02700 PF00298 Ribosomal protein L11, RNA binding domain JR346_RS02705 PF00687 Ribosomal protein L1p/L10e family JR346_RS02710 PF00466 Ribosomal protein L10 JR346_RS02715 PF16320 Ribosomal protein L7/L12 dimerisation domain JR346_RS02715 PF00542 Ribosomal protein L7/L12 C-terminal domain JR346_RS02720 PF08244 Glycosyl hydrolases family 32 C terminal JR346_RS02720 PF00251 Glycosyl hydrolases family 32 N-terminal domain JR346_RS02725 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 JR346_RS02725 PF02378 Phosphotransferase system, EIIC JR346_RS02725 PF00367 phosphotransferase system, EIIB JR346_RS02735 PF00356 Bacterial regulatory proteins, lacI family JR346_RS02740 PF03453 MoeA N-terminal region (domain I and II) JR346_RS02740 PF03454 MoeA C-terminal region (domain IV) JR346_RS02740 PF00994 Probable molybdopterin binding domain JR346_RS02745 PF12804 MobA-like NTP transferase domain JR346_RS02755 PF04055 Radical SAM superfamily JR346_RS02755 PF06463 Molybdenum Cofactor Synthesis C JR346_RS02765 PF00528 Binding-protein-dependent transport system inner membrane component JR346_RS02770 PF03453 MoeA N-terminal region (domain I and II) JR346_RS02770 PF03454 MoeA C-terminal region (domain IV) JR346_RS02770 PF00994 Probable molybdopterin binding domain JR346_RS02775 PF01967 MoaC family JR346_RS02790 PF00899 ThiF family JR346_RS02790 PF00581 Rhodanese-like domain JR346_RS02795 PF01568 Molydopterin dinucleotide binding domain JR346_RS02795 PF00384 Molybdopterin oxidoreductase JR346_RS02800 PF14711 Respiratory nitrate reductase beta C-terminal JR346_RS02800 PF13247 4Fe-4S dicluster domain JR346_RS02805 PF02613 Nitrate reductase delta subunit JR346_RS02810 PF02665 Nitrate reductase gamma subunit JR346_RS02810 PF00384 Molybdopterin oxidoreductase JR346_RS02810 PF02613 Nitrate reductase delta subunit JR346_RS02815 PF07690 Major Facilitator Superfamily JR346_RS02820 PF02347 Glycine cleavage system P-protein JR346_RS02825 PF01571 Aminomethyltransferase folate-binding domain JR346_RS02825 PF08669 Glycine cleavage T-protein C-terminal barrel domain JR346_RS02830 PF03313 Serine dehydratase alpha chain JR346_RS02830 PF03315 Serine dehydratase beta chain JR346_RS02835 PF04563 RNA polymerase beta subunit JR346_RS02835 PF00562 RNA polymerase Rpb2, domain 6 JR346_RS02835 PF04561 RNA polymerase Rpb2, domain 2 JR346_RS02835 PF04560 RNA polymerase Rpb2, domain 7 JR346_RS02835 PF04565 RNA polymerase Rpb2, domain 3 JR346_RS02835 PF10385 RNA polymerase beta subunit external 1 domain JR346_RS02840 PF05000 RNA polymerase Rpb1, domain 4 JR346_RS02840 PF04983 RNA polymerase Rpb1, domain 3 JR346_RS02840 PF00623 RNA polymerase Rpb1, domain 2 JR346_RS02840 PF04997 RNA polymerase Rpb1, domain 1 JR346_RS02840 PF04998 RNA polymerase Rpb1, domain 5 JR346_RS02845 PF17048 Neutral/alkaline non-lysosomal ceramidase, C-terminal JR346_RS02845 PF04734 Neutral/alkaline non-lysosomal ceramidase, N-terminal JR346_RS02850 PF00164 Ribosomal protein S12/S23 JR346_RS02855 PF00177 Ribosomal protein S7p/S5e JR346_RS02860 PF00009 Elongation factor Tu GTP binding domain JR346_RS02860 PF03764 Elongation factor G, domain IV JR346_RS02860 PF14492 Elongation Factor G, domain II JR346_RS02860 PF00679 Elongation factor G C-terminus JR346_RS02860 PF03144 Elongation factor Tu domain 2 JR346_RS02865 PF03144 Elongation factor Tu domain 2 JR346_RS02865 PF00009 Elongation factor Tu GTP binding domain JR346_RS02865 PF03143 Elongation factor Tu C-terminal domain JR346_RS02870 PF05525 Branched-chain amino acid transport protein JR346_RS02875 PF05199 GMC oxidoreductase JR346_RS02875 PF00732 GMC oxidoreductase JR346_RS02885 PF00338 Ribosomal protein S10p/S20e JR346_RS02890 PF00297 Ribosomal protein L3 JR346_RS02895 PF00573 Ribosomal protein L4/L1 family JR346_RS02900 PF00276 Ribosomal protein L23 JR346_RS02905 PF03947 Ribosomal Proteins L2, C-terminal domain JR346_RS02905 PF00181 Ribosomal Proteins L2, RNA binding domain JR346_RS02910 PF00203 Ribosomal protein S19 JR346_RS02915 PF00237 Ribosomal protein L22p/L17e JR346_RS02920 PF07650 KH domain JR346_RS02920 PF00189 Ribosomal protein S3, C-terminal domain JR346_RS02925 PF00252 Ribosomal protein L16p/L10e JR346_RS02930 PF00831 Ribosomal L29 protein JR346_RS02935 PF00366 Ribosomal protein S17 JR346_RS02940 PF00238 Ribosomal protein L14p/L23e JR346_RS02945 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 JR346_RS02950 PF00673 ribosomal L5P family C-terminus JR346_RS02950 PF00281 Ribosomal protein L5 JR346_RS02955 PF00410 Ribosomal protein S8 JR346_RS02960 PF00347 Ribosomal protein L6 JR346_RS02965 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast JR346_RS02970 PF00333 Ribosomal protein S5, N-terminal domain JR346_RS02970 PF03719 Ribosomal protein S5, C-terminal domain JR346_RS02975 PF00327 Ribosomal protein L30p/L7e JR346_RS02980 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A JR346_RS02985 PF00344 SecY translocase JR346_RS02995 PF00557 Metallopeptidase family M24 JR346_RS03000 PF04055 Radical SAM superfamily JR346_RS03005 PF01176 Translation initiation factor 1A / IF-1 JR346_RS03010 PF00444 Ribosomal protein L36 JR346_RS03015 PF00416 Ribosomal protein S13/S18 JR346_RS03020 PF00411 Ribosomal protein S11 JR346_RS03025 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain JR346_RS03025 PF01000 RNA polymerase Rpb3/RpoA insert domain JR346_RS03025 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain JR346_RS03030 PF01196 Ribosomal protein L17 JR346_RS03035 PF01416 tRNA pseudouridine synthase JR346_RS03040 PF00572 Ribosomal protein L13 JR346_RS03045 PF00380 Ribosomal protein S9/S16 JR346_RS03050 PF03976 Polyphosphate kinase 2 (PPK2) JR346_RS03055 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I JR346_RS03055 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II JR346_RS03055 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III JR346_RS03055 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain JR346_RS03060 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit JR346_RS03060 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 JR346_RS03060 PF02378 Phosphotransferase system, EIIC JR346_RS03065 PF01232 Mannitol dehydrogenase Rossmann domain JR346_RS03065 PF08125 Mannitol dehydrogenase C-terminal domain JR346_RS03070 PF01741 Large-conductance mechanosensitive channel, MscL JR346_RS03075 PF00485 Phosphoribulokinase / Uridine kinase family JR346_RS03080 PF01380 SIS domain JR346_RS03085 PF01648 4'-phosphopantetheinyl transferase superfamily JR346_RS03090 PF03853 YjeF-related protein N-terminus JR346_RS03090 PF01256 Carbohydrate kinase JR346_RS03095 PF02397 Bacterial sugar transferase JR346_RS03100 PF15698 Phosphatase JR346_RS03105 PF13439 Glycosyltransferase Family 4 JR346_RS03105 PF00534 Glycosyl transferases group 1 JR346_RS03110 PF00842 Alanine racemase, C-terminal domain JR346_RS03110 PF01168 Alanine racemase, N-terminal domain JR346_RS03115 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE JR346_RS03120 PF00814 Glycoprotease family JR346_RS03125 PF00583 Acetyltransferase (GNAT) family JR346_RS03130 PF00814 Glycoprotease family JR346_RS03135 PF04107 Glutamate-cysteine ligase family 2(GCS2) JR346_RS03145 PF00166 Chaperonin 10 Kd subunit JR346_RS03150 PF00118 TCP-1/cpn60 chaperonin family JR346_RS03155 PF01757 Acyltransferase family JR346_RS03160 PF00571 CBS domain JR346_RS03160 PF00478 IMP dehydrogenase / GMP reductase domain JR346_RS03165 PF00478 IMP dehydrogenase / GMP reductase domain JR346_RS03180 PF00117 Glutamine amidotransferase class-I JR346_RS03180 PF00958 GMP synthase C terminal domain JR346_RS03180 PF02540 NAD synthase JR346_RS03185 PF00128 Alpha amylase, catalytic domain JR346_RS03190 PF00128 Alpha amylase, catalytic domain JR346_RS03200 PF02378 Phosphotransferase system, EIIC JR346_RS03200 PF00367 phosphotransferase system, EIIB JR346_RS03230 PF01812 5-formyltetrahydrofolate cyclo-ligase family JR346_RS03235 PF00483 Nucleotidyl transferase JR346_RS03255 PF00924 Mechanosensitive ion channel JR346_RS03260 PF00293 NUDIX domain JR346_RS03270 PF00155 Aminotransferase class I and II JR346_RS03275 PF02609 Exonuclease VII small subunit JR346_RS03280 PF13742 OB-fold nucleic acid binding domain JR346_RS03280 PF02601 Exonuclease VII, large subunit JR346_RS03290 PF02401 LytB protein JR346_RS03295 PF03222 Tryptophan/tyrosine permease family JR346_RS03300 PF00893 Small Multidrug Resistance protein JR346_RS03305 PF00072 Response regulator receiver domain JR346_RS03305 PF00196 Bacterial regulatory proteins, luxR family JR346_RS03310 PF07730 Histidine kinase JR346_RS03310 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JR346_RS03320 PF00005 ABC transporter JR346_RS03325 PF01926 50S ribosome-binding GTPase JR346_RS03325 PF06071 Protein of unknown function (DUF933) JR346_RS03345 PF08274 PhnA Zinc-Ribbon JR346_RS03345 PF03831 PhnA domain JR346_RS03355 PF01734 Patatin-like phospholipase JR346_RS03360 PF07690 Major Facilitator Superfamily JR346_RS03365 PF08534 Redoxin JR346_RS03375 PF00324 Amino acid permease JR346_RS03385 PF00265 Thymidine kinase JR346_RS03415 PF13613 Helix-turn-helix of DDE superfamily endonuclease JR346_RS03415 PF13359 DDE superfamily endonuclease JR346_RS03420 PF03971 Monomeric isocitrate dehydrogenase JR346_RS03435 PF07676 WD40-like Beta Propeller Repeat JR346_RS03435 PF00326 Prolyl oligopeptidase family JR346_RS03435 PF00930 Dipeptidyl peptidase IV (DPP IV) N-terminal region JR346_RS03445 PF01470 Pyroglutamyl peptidase JR346_RS03455 PF00342 Phosphoglucose isomerase JR346_RS03460 PF02028 BCCT, betaine/carnitine/choline family transporter JR346_RS03465 PF00009 Elongation factor Tu GTP binding domain JR346_RS03465 PF00679 Elongation factor G C-terminus JR346_RS03465 PF03144 Elongation factor Tu domain 2 JR346_RS03465 PF14492 Elongation Factor G, domain II JR346_RS03470 PF02585 GlcNAc-PI de-N-acetylase JR346_RS03480 PF00037 4Fe-4S binding domain JR346_RS03485 PF00155 Aminotransferase class I and II JR346_RS03490 PF00285 Citrate synthase, C-terminal domain JR346_RS03495 PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system JR346_RS03500 PF06769 YoeB-like toxin of bacterial type II toxin-antitoxin system JR346_RS03505 PF16363 GDP-mannose 4,6 dehydratase JR346_RS03510 PF14789 Tetrahydrodipicolinate N-succinyltransferase middle JR346_RS03510 PF14602 Hexapeptide repeat of succinyl-transferase JR346_RS03515 PF07687 Peptidase dimerisation domain JR346_RS03515 PF01546 Peptidase family M20/M25/M40 JR346_RS03520 PF00528 Binding-protein-dependent transport system inner membrane component JR346_RS03525 PF00528 Binding-protein-dependent transport system inner membrane component JR346_RS03535 PF00005 ABC transporter JR346_RS03540 PF05103 DivIVA protein JR346_RS03550 PF01596 O-methyltransferase JR346_RS03555 PF02416 mttA/Hcf106 family JR346_RS03560 PF10609 NUBPL iron-transfer P-loop NTPase JR346_RS03560 PF01883 Iron-sulfur cluster assembly protein JR346_RS03570 PF01769 Divalent cation transporter JR346_RS03570 PF00571 CBS domain JR346_RS03570 PF03448 MgtE intracellular N domain JR346_RS03585 PF01555 DNA methylase JR346_RS03590 PF04851 Type III restriction enzyme, res subunit JR346_RS03595 PF07669 Eco57I restriction-modification methylase JR346_RS03600 PF07669 Eco57I restriction-modification methylase JR346_RS03610 PF00557 Metallopeptidase family M24 JR346_RS03610 PF05195 Aminopeptidase P, N-terminal domain JR346_RS03615 PF02811 PHP domain JR346_RS03620 PF01555 DNA methylase JR346_RS03625 PF00271 Helicase conserved C-terminal domain JR346_RS03625 PF00270 DEAD/DEAH box helicase JR346_RS03640 PF01488 Shikimate / quinate 5-dehydrogenase JR346_RS03640 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain JR346_RS03640 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain JR346_RS03645 PF01208 Uroporphyrinogen decarboxylase (URO-D) JR346_RS03650 PF01593 Flavin containing amine oxidoreductase JR346_RS03655 PF06778 Chlorite dismutase JR346_RS03660 PF00762 Ferrochelatase JR346_RS03665 PF03900 Porphobilinogen deaminase, C-terminal domain JR346_RS03665 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain JR346_RS03675 PF00490 Delta-aminolevulinic acid dehydratase JR346_RS03680 PF00202 Aminotransferase class-III JR346_RS03700 PF00580 UvrD/REP helicase N-terminal domain JR346_RS03700 PF13361 UvrD-like helicase C-terminal domain JR346_RS03710 PF00293 NUDIX domain JR346_RS03710 PF09296 NADH pyrophosphatase-like rudimentary NUDIX domain JR346_RS03710 PF09297 NADH pyrophosphatase zinc ribbon domain JR346_RS03715 PF00570 HRDC domain JR346_RS03715 PF13361 UvrD-like helicase C-terminal domain JR346_RS03730 PF13180 PDZ domain JR346_RS03730 PF05362 Lon protease (S16) C-terminal proteolytic domain JR346_RS03735 PF03699 Uncharacterised protein family (UPF0182) JR346_RS03780 PF00459 Inositol monophosphatase family JR346_RS03785 PF03193 RsgA GTPase JR346_RS03790 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) JR346_RS03800 PF04542 Sigma-70 region 2 JR346_RS03800 PF08281 Sigma-70, region 4 JR346_RS03815 PF16078 2-oxoglutarate dehydrogenase N-terminus JR346_RS03815 PF02779 Transketolase, pyrimidine binding domain JR346_RS03815 PF16870 2-oxoglutarate dehydrogenase C-terminal JR346_RS03815 PF00676 Dehydrogenase E1 component JR346_RS03815 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) JR346_RS03820 PF01595 Cyclin M transmembrane N-terminal domain JR346_RS03820 PF00571 CBS domain JR346_RS03820 PF03471 Transporter associated domain JR346_RS03825 PF01595 Cyclin M transmembrane N-terminal domain JR346_RS03825 PF00571 CBS domain JR346_RS03835 PF00005 ABC transporter JR346_RS03840 PF00950 ABC 3 transport family JR346_RS03845 PF01475 Ferric uptake regulator family JR346_RS03855 PF01230 HIT domain JR346_RS03860 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold JR346_RS03860 PF00271 Helicase conserved C-terminal domain JR346_RS03860 PF04408 Helicase associated domain (HA2) JR346_RS03860 PF11898 Domain of unknown function (DUF3418) JR346_RS03860 PF00270 DEAD/DEAH box helicase JR346_RS03875 PF00239 Resolvase, N terminal domain JR346_RS03875 PF02796 Helix-turn-helix domain of resolvase JR346_RS03910 PF03462 PCRF domain JR346_RS03910 PF00472 RF-1 domain JR346_RS03915 PF01668 SmpB protein JR346_RS03930 PF00072 Response regulator receiver domain JR346_RS03930 PF00486 Transcriptional regulatory protein, C terminal JR346_RS03945 PF05746 DALR anticodon binding domain JR346_RS03945 PF00750 tRNA synthetases class I (R) JR346_RS03945 PF03485 Arginyl tRNA synthetase N terminal domain JR346_RS03950 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain JR346_RS03950 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain JR346_RS03955 PF03447 Homoserine dehydrogenase, NAD binding domain JR346_RS03955 PF01842 ACT domain JR346_RS03955 PF00742 Homoserine dehydrogenase JR346_RS03960 PF00288 GHMP kinases N terminal domain JR346_RS03965 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain JR346_RS03965 PF07497 Rho termination factor, RNA-binding domain JR346_RS03965 PF07498 Rho termination factor, N-terminal domain JR346_RS03970 PF03462 PCRF domain JR346_RS03970 PF00472 RF-1 domain JR346_RS03975 PF13649 Methyltransferase domain JR346_RS03975 PF17827 PrmC N-terminal domain JR346_RS03980 PF01300 Telomere recombination JR346_RS03990 PF00535 Glycosyl transferase family 2 JR346_RS03995 PF02719 Polysaccharide biosynthesis protein JR346_RS04010 PF00119 ATP synthase A chain JR346_RS04015 PF00137 ATP synthase subunit C JR346_RS04020 PF00430 ATP synthase B/B' CF(0) JR346_RS04025 PF00213 ATP synthase delta (OSCP) subunit JR346_RS04030 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain JR346_RS04030 PF02874 ATP synthase alpha/beta family, beta-barrel domain JR346_RS04030 PF00306 ATP synthase alpha/beta chain, C terminal domain JR346_RS04035 PF00231 ATP synthase JR346_RS04040 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain JR346_RS04040 PF02874 ATP synthase alpha/beta family, beta-barrel domain JR346_RS04045 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain JR346_RS04050 PF01939 Endonuclease NucS JR346_RS04060 PF01594 AI-2E family transporter JR346_RS04070 PF13732 Domain of unknown function (DUF4162) JR346_RS04070 PF00005 ABC transporter JR346_RS04085 PF04851 Type III restriction enzyme, res subunit JR346_RS04090 PF00188 Cysteine-rich secretory protein family JR346_RS04095 PF00857 Isochorismatase family JR346_RS04100 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain JR346_RS04100 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain JR346_RS04105 PF02617 ATP-dependent Clp protease adaptor protein ClpS JR346_RS04115 PF01177 Asp/Glu/Hydantoin racemase JR346_RS04120 PF12706 Beta-lactamase superfamily domain JR346_RS04125 PF01138 3' exoribonuclease family, domain 1 JR346_RS04125 PF03725 3' exoribonuclease family, domain 2 JR346_RS04130 PF01725 Ham1 family JR346_RS04135 PF01636 Phosphotransferase enzyme family JR346_RS04145 PF12320 Type 5 capsule protein repressor C-terminal domain JR346_RS04145 PF00149 Calcineurin-like phosphoesterase JR346_RS04150 PF13476 AAA domain JR346_RS04160 PF00753 Metallo-beta-lactamase superfamily JR346_RS04160 PF16123 Hydroxyacylglutathione hydrolase C-terminus JR346_RS04165 PF00107 Zinc-binding dehydrogenase JR346_RS04165 PF08240 Alcohol dehydrogenase GroES-like domain JR346_RS04175 PF03631 Virulence factor BrkB JR346_RS04180 PF06039 Malate:quinone oxidoreductase (Mqo) JR346_RS04185 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle JR346_RS04195 PF00578 AhpC/TSA family JR346_RS04220 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain JR346_RS04220 PF00205 Thiamine pyrophosphate enzyme, central domain JR346_RS04220 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain JR346_RS04225 PF10369 Small subunit of acetolactate synthase JR346_RS04230 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain JR346_RS04230 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain JR346_RS04235 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain JR346_RS04235 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain JR346_RS04235 PF01842 ACT domain JR346_RS04240 PF09334 tRNA synthetases class I (M) JR346_RS04240 PF08264 Anticodon-binding domain of tRNA JR346_RS04255 PF00291 Pyridoxal-phosphate dependent enzyme JR346_RS04255 PF14821 Threonine synthase N terminus JR346_RS04260 PF00180 Isocitrate/isopropylmalate dehydrogenase JR346_RS04265 PF01063 Amino-transferase class IV JR346_RS04270 PF01557 Fumarylacetoacetate (FAA) hydrolase family JR346_RS04275 PF00749 tRNA synthetases class I (E and Q), catalytic domain JR346_RS04305 PF09339 IclR helix-turn-helix domain JR346_RS04305 PF01614 Bacterial transcriptional regulator JR346_RS04310 PF00330 Aconitase family (aconitate hydratase) JR346_RS04315 PF00694 Aconitase C-terminal domain JR346_RS04320 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) JR346_RS04330 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus JR346_RS04330 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus JR346_RS04335 PF01820 D-ala D-ala ligase N-terminus JR346_RS04335 PF07478 D-ala D-ala ligase C-terminus JR346_RS04355 PF13684 Dihydroxyacetone kinase family JR346_RS04355 PF02734 DAK2 domain JR346_RS04360 PF00270 DEAD/DEAH box helicase JR346_RS04360 PF00271 Helicase conserved C-terminal domain JR346_RS04360 PF17191 RecG wedge domain JR346_RS04375 PF01467 Cytidylyltransferase-like JR346_RS04380 PF02620 Large ribosomal RNA subunit accumulation protein YceD JR346_RS04385 PF01783 Ribosomal L32p protein family JR346_RS04390 PF14622 Ribonuclease-III-like JR346_RS04390 PF00035 Double-stranded RNA binding motif JR346_RS04395 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain JR346_RS04395 PF06827 Zinc finger found in FPG and IleRS JR346_RS04395 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain JR346_RS04400 PF01073 3-beta hydroxysteroid dehydrogenase/isomerase family JR346_RS04405 PF00501 AMP-binding enzyme JR346_RS04410 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal JR346_RS04410 PF00108 Thiolase, N-terminal domain JR346_RS04415 PF06470 SMC proteins Flexible Hinge Domain JR346_RS04415 PF02463 RecF/RecN/SMC N terminal domain JR346_RS04420 PF07690 Major Facilitator Superfamily JR346_RS04425 PF02881 SRP54-type protein, helical bundle domain JR346_RS04425 PF00448 SRP54-type protein, GTPase domain JR346_RS04435 PF03372 Endonuclease/Exonuclease/phosphatase family JR346_RS04440 PF02881 SRP54-type protein, helical bundle domain JR346_RS04440 PF02978 Signal peptide binding domain JR346_RS04440 PF00448 SRP54-type protein, GTPase domain JR346_RS04455 PF00886 Ribosomal protein S16 JR346_RS04465 PF01782 RimM N-terminal domain JR346_RS04470 PF01746 tRNA (Guanine-1)-methyltransferase JR346_RS04475 PF00551 Formyl transferase JR346_RS04480 PF01245 Ribosomal protein L19 JR346_RS04485 PF10502 Signal peptidase, peptidase S26 JR346_RS04490 PF10502 Signal peptidase, peptidase S26 JR346_RS04495 PF01351 Ribonuclease HII JR346_RS04500 PF10611 Protein of unknown function (DUF2469) JR346_RS04505 PF02021 Uncharacterised protein family UPF0102 JR346_RS04510 PF01078 Magnesium chelatase, subunit ChlI JR346_RS04510 PF13335 Magnesium chelatase, subunit ChlI C-terminal JR346_RS04515 PF02481 DNA recombination-mediator protein A JR346_RS04515 PF17782 DprA winged helix domain JR346_RS04520 PF00589 Phage integrase family JR346_RS04520 PF02899 Phage integrase, N-terminal SAM-like domain JR346_RS04530 PF02801 Beta-ketoacyl synthase, C-terminal domain JR346_RS04530 PF00109 Beta-ketoacyl synthase, N-terminal domain JR346_RS04535 PF00550 Phosphopantetheine attachment site JR346_RS04540 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III JR346_RS04540 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal JR346_RS04545 PF00698 Acyl transferase domain JR346_RS04550 PF17831 Pyruvate dehydrogenase E1 component middle domain JR346_RS04550 PF00456 Transketolase, thiamine diphosphate binding domain JR346_RS04555 PF11253 Protein of unknown function (DUF3052) JR346_RS04575 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain JR346_RS04575 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase JR346_RS04580 PF00132 Bacterial transferase hexapeptide (six repeats) JR346_RS04580 PF06426 Serine acetyltransferase, N-terminal JR346_RS04585 PF00291 Pyridoxal-phosphate dependent enzyme JR346_RS04590 PF01625 Peptide methionine sulfoxide reductase JR346_RS04595 PF01784 NIF3 (NGG1p interacting factor 3) JR346_RS04600 PF03883 Peroxide stress protein YaaA JR346_RS04610 PF01327 Polypeptide deformylase JR346_RS04615 PF00441 Acyl-CoA dehydrogenase, C-terminal domain JR346_RS04615 PF02770 Acyl-CoA dehydrogenase, middle domain JR346_RS04615 PF02771 Acyl-CoA dehydrogenase, N-terminal domain JR346_RS04625 PF00929 Exonuclease JR346_RS04645 PF08310 LGFP repeat JR346_RS04645 PF00756 Putative esterase JR346_RS04660 PF12848 ABC transporter JR346_RS04660 PF00005 ABC transporter JR346_RS04670 PF01032 FecCD transport family JR346_RS04685 PF01152 Bacterial-like globin JR346_RS04690 PF11838 ERAP1-like C-terminal domain JR346_RS04690 PF01433 Peptidase family M1 domain JR346_RS04695 PF02502 Ribose/Galactose Isomerase JR346_RS04700 PF06827 Zinc finger found in FPG and IleRS JR346_RS04700 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain JR346_RS04700 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain JR346_RS04710 PF08264 Anticodon-binding domain of tRNA JR346_RS04710 PF00133 tRNA synthetases class I (I, L, M and V) JR346_RS04715 PF00106 short chain dehydrogenase JR346_RS04730 PF08543 Phosphomethylpyrimidine kinase JR346_RS04740 PF07015 VirC1 protein JR346_RS04765 PF06508 Queuosine biosynthesis protein QueC JR346_RS04785 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases JR346_RS04785 PF14824 Sirohaem biosynthesis protein central JR346_RS04785 PF10414 Sirohaem synthase dimerisation region JR346_RS04790 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain JR346_RS04790 PF07992 Pyridine nucleotide-disulphide oxidoreductase JR346_RS04790 PF18267 Rubredoxin NAD+ reductase C-terminal domain JR346_RS04790 PF04324 BFD-like [2Fe-2S] binding domain JR346_RS04790 PF01077 Nitrite and sulphite reductase 4Fe-4S domain JR346_RS04800 PF00583 Acetyltransferase (GNAT) family JR346_RS04800 PF00795 Carbon-nitrogen hydrolase JR346_RS04805 PF10414 Sirohaem synthase dimerisation region JR346_RS04805 PF14824 Sirohaem biosynthesis protein central JR346_RS04805 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases JR346_RS04810 PF00133 tRNA synthetases class I (I, L, M and V) JR346_RS04810 PF08264 Anticodon-binding domain of tRNA JR346_RS04815 PF08245 Mur ligase middle domain JR346_RS04815 PF02875 Mur ligase family, glutamate ligase domain JR346_RS04825 PF00334 Nucleoside diphosphate kinase JR346_RS04835 PF10150 Ribonuclease E/G family JR346_RS04840 PF00829 Ribosomal prokaryotic L21 protein JR346_RS04845 PF01016 Ribosomal L27 protein JR346_RS04850 PF09269 Domain of unknown function (DUF1967) JR346_RS04850 PF01018 GTP1/OBG JR346_RS04850 PF01926 50S ribosome-binding GTPase JR346_RS04855 PF00696 Amino acid kinase family JR346_RS04855 PF01472 PUA domain JR346_RS04860 PF00171 Aldehyde dehydrogenase family JR346_RS04870 PF01467 Cytidylyltransferase-like JR346_RS04895 PF05175 Methyltransferase small domain JR346_RS04930 PF07972 NrdI Flavodoxin like JR346_RS04935 PF08343 Ribonucleotide reductase N-terminal JR346_RS04935 PF00317 Ribonucleotide reductase, all-alpha domain JR346_RS04935 PF02867 Ribonucleotide reductase, barrel domain JR346_RS04945 PF00268 Ribonucleotide reductase, small chain JR346_RS04960 PF02586 SOS response associated peptidase (SRAP) JR346_RS04970 PF01557 Fumarylacetoacetate (FAA) hydrolase family JR346_RS04990 PF03129 Anticodon binding domain JR346_RS04990 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain JR346_RS04990 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) JR346_RS05005 PF13276 HTH-like domain JR346_RS05005 PF00665 Integrase core domain JR346_RS05005 PF13333 Integrase core domain JR346_RS05015 PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system JR346_RS05020 PF06769 YoeB-like toxin of bacterial type II toxin-antitoxin system JR346_RS05025 PF00135 Carboxylesterase family JR346_RS05035 PF02590 Predicted SPOUT methyltransferase JR346_RS05040 PF01230 HIT domain JR346_RS05050 PF08245 Mur ligase middle domain JR346_RS05055 PF07685 CobB/CobQ-like glutamine amidotransferase domain JR346_RS05060 PF01709 Transcriptional regulator JR346_RS05065 PF02075 Crossover junction endodeoxyribonuclease RuvC JR346_RS05070 PF01330 RuvA N terminal domain JR346_RS05070 PF07499 RuvA, C-terminal domain JR346_RS05075 PF05491 RuvB C-terminal winged helix domain JR346_RS05075 PF05496 Holliday junction DNA helicase RuvB P-loop domain JR346_RS05075 PF17864 RuvB AAA lid domain JR346_RS05085 PF02355 Protein export membrane protein JR346_RS05085 PF07549 SecD/SecF GG Motif JR346_RS05090 PF07549 SecD/SecF GG Motif JR346_RS05090 PF02355 Protein export membrane protein JR346_RS05095 PF13291 ACT domain JR346_RS05095 PF04607 Region found in RelA / SpoT proteins JR346_RS05095 PF02824 TGS domain JR346_RS05105 PF03993 Domain of Unknown Function (DUF349) JR346_RS05110 PF13393 Histidyl-tRNA synthetase JR346_RS05110 PF03129 Anticodon binding domain JR346_RS05115 PF01336 OB-fold nucleic acid binding domain JR346_RS05115 PF02938 GAD domain JR346_RS05115 PF00152 tRNA synthetases class II (D, K and N) JR346_RS05120 PF02580 D-Tyr-tRNA(Tyr) deacylase JR346_RS05125 PF00004 ATPase family associated with various cellular activities (AAA) JR346_RS05125 PF16193 AAA C-terminal domain JR346_RS05125 PF12002 MgsA AAA+ ATPase C terminal JR346_RS05135 PF00163 Ribosomal protein S4/S9 N-terminal domain JR346_RS05135 PF01479 S4 domain JR346_RS05150 PF02272 DHHA1 domain JR346_RS05150 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain JR346_RS05150 PF01411 tRNA synthetases class II (A) JR346_RS05155 PF03652 Holliday junction resolvase JR346_RS05165 PF18317 Shikimate 5'-dehydrogenase C-terminal domain JR346_RS05165 PF08501 Shikimate dehydrogenase substrate binding domain JR346_RS05165 PF01488 Shikimate / quinate 5-dehydrogenase JR346_RS05170 PF01264 Chorismate synthase JR346_RS05175 PF01202 Shikimate kinase JR346_RS05180 PF01761 3-dehydroquinate synthase JR346_RS05185 PF09285 Elongation factor P, C-terminal JR346_RS05185 PF08207 Elongation factor P (EF-P) KOW-like domain JR346_RS05185 PF01132 Elongation factor P (EF-P) OB domain JR346_RS05190 PF01029 NusB family JR346_RS05195 PF00156 Phosphoribosyl transferase domain JR346_RS05200 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain JR346_RS05200 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain JR346_RS05205 PF01979 Amidohydrolase family JR346_RS05215 PF00117 Glutamine amidotransferase class-I JR346_RS05215 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain JR346_RS05220 PF02142 MGS-like domain JR346_RS05220 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain JR346_RS05220 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain JR346_RS05225 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family JR346_RS05230 PF00625 Guanylate kinase JR346_RS05235 PF00625 Guanylate kinase JR346_RS05240 PF01192 RNA polymerase Rpb6 JR346_RS05245 PF04127 DNA / pantothenate metabolism flavoprotein JR346_RS05245 PF02441 Flavoprotein JR346_RS05250 PF02773 S-adenosylmethionine synthetase, C-terminal domain JR346_RS05250 PF02772 S-adenosylmethionine synthetase, central domain JR346_RS05250 PF00438 S-adenosylmethionine synthetase, N-terminal domain JR346_RS05255 PF17764 3′ DNA-binding domain (3′BD) JR346_RS05260 PF13439 Glycosyltransferase Family 4 JR346_RS05265 PF00561 alpha/beta hydrolase fold JR346_RS05270 PF08264 Anticodon-binding domain of tRNA JR346_RS05270 PF00133 tRNA synthetases class I (I, L, M and V) JR346_RS05270 PF13603 Leucyl-tRNA synthetase, Domain 2 JR346_RS05270 PF09334 tRNA synthetases class I (M) JR346_RS05275 PF02645 Uncharacterised protein, DegV family COG1307 JR346_RS05290 PF16123 Hydroxyacylglutathione hydrolase C-terminus JR346_RS05290 PF00753 Metallo-beta-lactamase superfamily JR346_RS05300 PF01649 Ribosomal protein S20 JR346_RS05310 PF06421 GTP-binding protein LepA C-terminus JR346_RS05310 PF03144 Elongation factor Tu domain 2 JR346_RS05310 PF00009 Elongation factor Tu GTP binding domain JR346_RS05310 PF00679 Elongation factor G C-terminus JR346_RS05315 PF04055 Radical SAM superfamily JR346_RS05330 PF01628 HrcA protein C terminal domain JR346_RS05330 PF08220 DeoR-like helix-turn-helix domain JR346_RS05335 PF01556 DnaJ C terminal domain JR346_RS05335 PF00226 DnaJ domain JR346_RS05335 PF00684 DnaJ central domain JR346_RS05340 PF04452 RNA methyltransferase JR346_RS05345 PF02562 PhoH-like protein JR346_RS05350 PF02130 Uncharacterized protein family UPF0054 JR346_RS05355 PF01595 Cyclin M transmembrane N-terminal domain JR346_RS05355 PF03471 Transporter associated domain JR346_RS05355 PF00571 CBS domain JR346_RS05360 PF01926 50S ribosome-binding GTPase JR346_RS05360 PF07650 KH domain JR346_RS05365 PF03816 Cell envelope-related transcriptional attenuator domain JR346_RS05370 PF00682 HMGL-like JR346_RS05370 PF08502 LeuA allosteric (dimerisation) domain JR346_RS05375 PF02565 Recombination protein O C terminal JR346_RS05375 PF11967 Recombination protein O N terminal JR346_RS05380 PF01255 Putative undecaprenyl diphosphate synthase JR346_RS05385 PF01180 Dihydroorotate dehydrogenase JR346_RS05390 PF11241 Protein of unknown function (DUF3043) JR346_RS05395 PF07687 Peptidase dimerisation domain JR346_RS05395 PF01546 Peptidase family M20/M25/M40 JR346_RS05400 PF01521 Iron-sulphur cluster biosynthesis JR346_RS05405 PF00116 Cytochrome C oxidase subunit II, periplasmic domain JR346_RS05410 PF00115 Cytochrome C and Quinol oxidase polypeptide I JR346_RS05415 PF12270 Cytochrome c oxidase subunit IV JR346_RS05420 PF13631 Cytochrome b(N-terminal)/b6/petB JR346_RS05425 PF00355 Rieske [2Fe-2S] domain JR346_RS05430 PF13442 Cytochrome C oxidase, cbb3-type, subunit III JR346_RS05430 PF00034 Cytochrome c JR346_RS05435 PF00510 Cytochrome c oxidase subunit III JR346_RS05440 PF02885 Glycosyl transferase family, helical bundle domain JR346_RS05440 PF00591 Glycosyl transferase family, a/b domain JR346_RS05450 PF13397 RNA polymerase-binding protein JR346_RS05455 PF00535 Glycosyl transferase family 2 JR346_RS05465 PF00271 Helicase conserved C-terminal domain JR346_RS05465 PF00270 DEAD/DEAH box helicase JR346_RS05465 PF08148 DSHCT (NUC185) domain JR346_RS05470 PF00902 Sec-independent protein translocase protein (TatC) JR346_RS05475 PF02416 mttA/Hcf106 family JR346_RS05490 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase JR346_RS05500 PF03136 Pup-ligase protein JR346_RS05505 PF05639 Pup-like protein JR346_RS05510 PF03136 Pup-ligase protein JR346_RS05515 PF17758 Proteasomal ATPase OB N-terminal domain JR346_RS05515 PF16450 Proteasomal ATPase OB C-terminal domain JR346_RS05515 PF00004 ATPase family associated with various cellular activities (AAA) JR346_RS05520 PF08704 tRNA methyltransferase complex GCD14 subunit JR346_RS05530 PF02163 Peptidase family M50 JR346_RS05540 PF01406 tRNA synthetases class I (C) catalytic domain JR346_RS05545 PF02673 Bacitracin resistance protein BacA JR346_RS05560 PF00056 lactate/malate dehydrogenase, NAD binding domain JR346_RS05560 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain JR346_RS05570 PF01433 Peptidase family M1 domain JR346_RS05570 PF11838 ERAP1-like C-terminal domain JR346_RS05580 PF03816 Cell envelope-related transcriptional attenuator domain JR346_RS05585 PF01197 Ribosomal protein L31 JR346_RS05590 PF00588 SpoU rRNA Methylase family JR346_RS05595 PF00005 ABC transporter JR346_RS05650 PF12848 ABC transporter JR346_RS05650 PF16326 ABC transporter C-terminal domain JR346_RS05650 PF00005 ABC transporter JR346_RS05655 PF02632 BioY family JR346_RS05660 PF00005 ABC transporter JR346_RS05675 PF01613 Flavin reductase like domain JR346_RS05680 PF00296 Luciferase-like monooxygenase JR346_RS05695 PF01883 Iron-sulfur cluster assembly protein JR346_RS05700 PF00005 ABC transporter JR346_RS05705 PF01458 Uncharacterized protein family (UPF0051) JR346_RS05710 PF01458 Uncharacterized protein family (UPF0051) JR346_RS05720 PF13732 Domain of unknown function (DUF4162) JR346_RS05720 PF00005 ABC transporter JR346_RS05740 PF01040 UbiA prenyltransferase family JR346_RS05745 PF00456 Transketolase, thiamine diphosphate binding domain JR346_RS05745 PF02779 Transketolase, pyrimidine binding domain JR346_RS05745 PF02780 Transketolase, C-terminal domain JR346_RS05750 PF00923 Transaldolase/Fructose-6-phosphate aldolase JR346_RS05755 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain JR346_RS05755 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain JR346_RS05765 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase JR346_RS05770 PF03840 Preprotein translocase SecG subunit JR346_RS05775 PF00121 Triosephosphate isomerase JR346_RS05780 PF00162 Phosphoglycerate kinase JR346_RS05785 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain JR346_RS05785 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain JR346_RS05790 PF02650 WhiA C-terminal HTH domain JR346_RS05790 PF14527 WhiA LAGLIDADG-like domain JR346_RS05790 PF10298 WhiA N-terminal LAGLIDADG-like domain JR346_RS05795 PF01933 Uncharacterised protein family UPF0052 JR346_RS05800 PF03668 P-loop ATPase protein family JR346_RS05805 PF01541 GIY-YIG catalytic domain JR346_RS05805 PF08459 UvrC Helix-hairpin-helix N-terminal JR346_RS05805 PF02151 UvrB/uvrC motif JR346_RS05810 PF01553 Acyltransferase JR346_RS05810 PF00501 AMP-binding enzyme JR346_RS05830 PF00005 ABC transporter JR346_RS05830 PF17760 UvrA interaction domain JR346_RS05830 PF17755 UvrA DNA-binding domain JR346_RS05840 PF01268 Formate--tetrahydrofolate ligase JR346_RS05845 PF00005 ABC transporter JR346_RS05845 PF00664 ABC transporter transmembrane region JR346_RS05850 PF00664 ABC transporter transmembrane region JR346_RS05850 PF00005 ABC transporter JR346_RS05850 PF03412 Peptidase C39 family JR346_RS05860 PF00270 DEAD/DEAH box helicase JR346_RS05860 PF00271 Helicase conserved C-terminal domain JR346_RS05860 PF08148 DSHCT (NUC185) domain JR346_RS05875 PF00561 alpha/beta hydrolase fold JR346_RS05885 PF00528 Binding-protein-dependent transport system inner membrane component JR346_RS05885 PF12911 N-terminal TM domain of oligopeptide transport permease C JR346_RS05890 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle JR346_RS05895 PF00005 ABC transporter JR346_RS05900 PF12704 MacB-like periplasmic core domain JR346_RS05900 PF02687 FtsX-like permease family JR346_RS05900 PF00005 ABC transporter JR346_RS05905 PF07690 Major Facilitator Superfamily JR346_RS05910 PF03741 Integral membrane protein TerC family JR346_RS05930 PF00271 Helicase conserved C-terminal domain JR346_RS05930 PF02151 UvrB/uvrC motif JR346_RS05930 PF12344 Ultra-violet resistance protein B JR346_RS05930 PF17757 UvrB interaction domain JR346_RS05930 PF04851 Type III restriction enzyme, res subunit JR346_RS05935 PF02028 BCCT, betaine/carnitine/choline family transporter JR346_RS05940 PF04229 GrpB protein JR346_RS05940 PF01121 Dephospho-CoA kinase JR346_RS05945 PF01205 Uncharacterized protein family UPF0029 JR346_RS05945 PF09186 Domain of unknown function (DUF1949) JR346_RS05950 PF00575 S1 RNA binding domain JR346_RS05960 PF00476 DNA polymerase family A JR346_RS05960 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain JR346_RS05960 PF01367 5'-3' exonuclease, C-terminal SAM fold JR346_RS05965 PF03061 Thioesterase superfamily JR346_RS05980 PF00072 Response regulator receiver domain JR346_RS05980 PF03861 ANTAR domain JR346_RS05990 PF00224 Pyruvate kinase, barrel domain JR346_RS05990 PF02887 Pyruvate kinase, alpha/beta domain JR346_RS06010 PF01323 DSBA-like thioredoxin domain JR346_RS06015 PF07724 AAA domain (Cdc48 subfamily) JR346_RS06015 PF06689 ClpX C4-type zinc finger JR346_RS06015 PF10431 C-terminal, D2-small domain, of ClpB protein JR346_RS06020 PF00574 Clp protease JR346_RS06025 PF00574 Clp protease JR346_RS06030 PF00005 ABC transporter JR346_RS06035 PF01032 FecCD transport family JR346_RS06040 PF01032 FecCD transport family JR346_RS06050 PF05697 Bacterial trigger factor protein (TF) JR346_RS06050 PF05698 Bacterial trigger factor protein (TF) C-terminus JR346_RS06050 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase JR346_RS06070 PF01790 Prolipoprotein diacylglyceryl transferase JR346_RS06075 PF00290 Tryptophan synthase alpha chain JR346_RS06095 PF00425 chorismate binding enzyme JR346_RS06095 PF04715 Anthranilate synthase component I, N terminal region JR346_RS06100 PF01502 Phosphoribosyl-AMP cyclohydrolase JR346_RS06110 PF00977 Histidine biosynthesis protein JR346_RS06115 PF08029 HisG, C-terminal domain JR346_RS06115 PF01634 ATP phosphoribosyltransferase JR346_RS06120 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase JR346_RS06125 PF00885 6,7-dimethyl-8-ribityllumazine synthase JR346_RS06130 PF00925 GTP cyclohydrolase II JR346_RS06130 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase JR346_RS06135 PF00925 GTP cyclohydrolase II JR346_RS06135 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase JR346_RS06140 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region JR346_RS06140 PF01872 RibD C-terminal domain JR346_RS06165 PF00834 Ribulose-phosphate 3 epimerase family JR346_RS06170 PF01029 NusB family JR346_RS06170 PF01189 16S rRNA methyltransferase RsmB/F JR346_RS06175 PF00551 Formyl transferase JR346_RS06175 PF02911 Formyl transferase, C-terminal domain JR346_RS06180 PF01327 Polypeptide deformylase JR346_RS06240 PF01641 SelR domain JR346_RS06255 PF02780 Transketolase, C-terminal domain JR346_RS06255 PF13292 1-deoxy-D-xylulose-5-phosphate synthase JR346_RS06255 PF02779 Transketolase, pyrimidine binding domain JR346_RS06265 PF00694 Aconitase C-terminal domain JR346_RS06265 PF00330 Aconitase family (aconitate hydratase) JR346_RS06270 PF05958 tRNA (Uracil-5-)-methyltransferase JR346_RS06270 PF01938 TRAM domain JR346_RS06275 PF13520 Amino acid permease JR346_RS06280 PF02254 TrkA-N domain JR346_RS06280 PF02080 TrkA-C domain JR346_RS06285 PF02080 TrkA-C domain JR346_RS06285 PF02254 TrkA-N domain JR346_RS06305 PF00692 dUTPase JR346_RS06355 PF03989 DNA gyrase C-terminal domain, beta-propeller JR346_RS06355 PF00521 DNA gyrase/topoisomerase IV, subunit A JR346_RS06380 PF00056 lactate/malate dehydrogenase, NAD binding domain JR346_RS06380 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain JR346_RS06385 PF00986 DNA gyrase B subunit, carboxyl terminus JR346_RS06385 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JR346_RS06385 PF01751 Toprim domain JR346_RS06385 PF00204 DNA gyrase B JR346_RS06395 PF04545 Sigma-70, region 4 JR346_RS06395 PF04539 Sigma-70 region 3 JR346_RS06395 PF04542 Sigma-70 region 2 JR346_RS06395 PF00140 Sigma-70 factor, region 1.2 JR346_RS06410 PF02789 Cytosol aminopeptidase family, N-terminal domain JR346_RS06410 PF00883 Cytosol aminopeptidase family, catalytic domain JR346_RS06415 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain JR346_RS06415 PF07992 Pyridine nucleotide-disulphide oxidoreductase JR346_RS06420 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) JR346_RS06420 PF00364 Biotin-requiring enzyme JR346_RS06420 PF02817 e3 binding domain JR346_RS06435 PF03099 Biotin/lipoate A/B protein ligase family JR346_RS06440 PF04055 Radical SAM superfamily JR346_RS06440 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family JR346_RS06455 PF00120 Glutamine synthetase, catalytic domain JR346_RS06455 PF03951 Glutamine synthetase, beta-Grasp domain JR346_RS06465 PF03306 Alpha-acetolactate decarboxylase JR346_RS06470 PF00892 EamA-like transporter family JR346_RS06480 PF03710 Glutamate-ammonia ligase adenylyltransferase JR346_RS06480 PF08335 GlnD PII-uridylyltransferase JR346_RS06485 PF03951 Glutamine synthetase, beta-Grasp domain JR346_RS06485 PF00120 Glutamine synthetase, catalytic domain JR346_RS06490 PF02548 Ketopantoate hydroxymethyltransferase JR346_RS06500 PF00557 Metallopeptidase family M24 JR346_RS06505 PF00480 ROK family JR346_RS06510 PF00343 Carbohydrate phosphorylase JR346_RS06515 PF00128 Alpha amylase, catalytic domain JR346_RS06515 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) JR346_RS06515 PF02806 Alpha amylase, C-terminal all-beta domain JR346_RS06520 PF00483 Nucleotidyl transferase JR346_RS06525 PF08323 Starch synthase catalytic domain JR346_RS06525 PF00534 Glycosyl transferases group 1 JR346_RS06530 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) JR346_RS06530 PF00128 Alpha amylase, catalytic domain JR346_RS06535 PF03477 ATP cone domain JR346_RS06540 PF00815 Histidinol dehydrogenase JR346_RS06545 PF07733 Bacterial DNA polymerase III alpha NTPase domain JR346_RS06545 PF17657 Bacterial DNA polymerase III alpha subunit finger domain JR346_RS06545 PF14579 Helix-hairpin-helix motif JR346_RS06545 PF02811 PHP domain JR346_RS06550 PF00849 RNA pseudouridylate synthase JR346_RS06555 PF01252 Signal peptidase (SPase) II JR346_RS06560 PF05103 DivIVA protein JR346_RS06570 PF04472 Cell division protein SepF JR346_RS06575 PF01168 Alanine racemase, N-terminal domain JR346_RS06580 PF02578 Multi-copper polyphenol oxidoreductase laccase JR346_RS06585 PF12327 FtsZ family, C-terminal domain JR346_RS06585 PF00091 Tubulin/FtsZ family, GTPase domain JR346_RS06590 PF08478 POTRA domain, FtsQ-type JR346_RS06590 PF03799 Cell division protein FtsQ JR346_RS06595 PF01225 Mur ligase family, catalytic domain JR346_RS06595 PF02875 Mur ligase family, glutamate ligase domain JR346_RS06595 PF08245 Mur ligase middle domain JR346_RS06600 PF04101 Glycosyltransferase family 28 C-terminal domain JR346_RS06600 PF03033 Glycosyltransferase family 28 N-terminal domain JR346_RS06605 PF01098 Cell cycle protein JR346_RS06610 PF08245 Mur ligase middle domain JR346_RS06610 PF02875 Mur ligase family, glutamate ligase domain JR346_RS06615 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 JR346_RS06615 PF00953 Glycosyl transferase family 4 JR346_RS06620 PF01225 Mur ligase family, catalytic domain JR346_RS06620 PF02875 Mur ligase family, glutamate ligase domain JR346_RS06620 PF08245 Mur ligase middle domain JR346_RS06625 PF08245 Mur ligase middle domain JR346_RS06625 PF02875 Mur ligase family, glutamate ligase domain JR346_RS06625 PF01225 Mur ligase family, catalytic domain JR346_RS06630 PF00905 Penicillin binding protein transpeptidase domain JR346_RS06630 PF03717 Penicillin-binding Protein dimerisation domain JR346_RS06640 PF01795 MraW methylase family JR346_RS06645 PF02381 MraZ protein, putative antitoxin-like JR346_RS06655 PF00817 impB/mucB/samB family JR346_RS06655 PF11799 impB/mucB/samB family C-terminal domain JR346_RS06660 PF00348 Polyprenyl synthetase JR346_RS06670 PF03793 PASTA domain JR346_RS06670 PF00069 Protein kinase domain JR346_RS06675 PF01474 Class-II DAHP synthetase family JR346_RS06680 PF01553 Acyltransferase JR346_RS06685 PF12146 Serine aminopeptidase, S33 JR346_RS06690 PF00501 AMP-binding enzyme JR346_RS06700 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain JR346_RS06700 PF07992 Pyridine nucleotide-disulphide oxidoreductase JR346_RS06705 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain JR346_RS06705 PF00364 Biotin-requiring enzyme JR346_RS06705 PF00289 Biotin carboxylase, N-terminal domain JR346_RS06705 PF02436 Conserved carboxylase domain JR346_RS06705 PF00682 HMGL-like JR346_RS06705 PF02785 Biotin carboxylase C-terminal domain JR346_RS06710 PF13411 MerR HTH family regulatory protein JR346_RS06715 PF00376 MerR family regulatory protein JR346_RS06720 PF00498 FHA domain JR346_RS06725 PF01597 Glycine cleavage H-protein JR346_RS06730 PF01619 Proline dehydrogenase JR346_RS06730 PF14850 DNA-binding domain of Proline dehydrogenase JR346_RS06730 PF18327 Proline utilization A proline dehydrogenase N-terminal domain JR346_RS06730 PF00171 Aldehyde dehydrogenase family JR346_RS06735 PF03466 LysR substrate binding domain JR346_RS06735 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JR346_RS06755 PF01266 FAD dependent oxidoreductase JR346_RS06755 PF16901 C-terminal domain of alpha-glycerophosphate oxidase JR346_RS06760 PF00230 Major intrinsic protein JR346_RS06765 PF00370 FGGY family of carbohydrate kinases, N-terminal domain JR346_RS06765 PF02782 FGGY family of carbohydrate kinases, C-terminal domain JR346_RS06780 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain JR346_RS06780 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain JR346_RS06790 PF03352 Methyladenine glycosylase JR346_RS06860 PF05724 Thiopurine S-methyltransferase (TPMT) JR346_RS06885 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal JR346_RS06885 PF01926 50S ribosome-binding GTPase JR346_RS06890 PF02224 Cytidylate kinase JR346_RS06895 PF02153 Prephenate dehydrogenase JR346_RS06900 PF01479 S4 domain JR346_RS06900 PF00849 RNA pseudouridylate synthase JR346_RS06905 PF04079 Segregation and condensation complex subunit ScpB JR346_RS06910 PF02616 Segregation and condensation protein ScpA JR346_RS06920 PF13614 AAA domain JR346_RS06925 PF16177 Acetyl-coenzyme A synthetase N-terminus JR346_RS06925 PF00501 AMP-binding enzyme JR346_RS06925 PF13193 AMP-binding enzyme C-terminal domain JR346_RS06935 PF03972 MmgE/PrpD family JR346_RS06945 PF00285 Citrate synthase, C-terminal domain JR346_RS06950 PF00589 Phage integrase family JR346_RS06950 PF02899 Phage integrase, N-terminal SAM-like domain JR346_RS06955 PF00293 NUDIX domain JR346_RS06960 PF01425 Amidase JR346_RS06965 PF02463 RecF/RecN/SMC N terminal domain JR346_RS06970 PF01513 ATP-NAD kinase JR346_RS06975 PF01728 FtsJ-like methyltransferase JR346_RS06975 PF01479 S4 domain JR346_RS06985 PF18407 GCN5-related N-acetyltransferase like domain JR346_RS06985 PF13344 Haloacid dehalogenase-like hydrolase JR346_RS07005 PF17994 Galactofuranosyltransferase 2 N-terminal JR346_RS07010 PF03275 UDP-galactopyranose mutase JR346_RS07015 PF01580 FtsK/SpoIIIE family JR346_RS07015 PF12538 DNA transporter JR346_RS07025 PF02467 Transcription factor WhiB JR346_RS07030 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JR346_RS07030 PF07568 Histidine kinase JR346_RS07030 PF12282 Signal transduction histidine kinase JR346_RS07065 PF01043 SecA preprotein cross-linking domain JR346_RS07065 PF07517 SecA DEAD-like domain JR346_RS07065 PF07516 SecA Wing and Scaffold domain JR346_RS07070 PF16321 Sigma 54 modulation/S30EA ribosomal protein C terminus JR346_RS07070 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein JR346_RS07075 PF00156 Phosphoribosyl transferase domain JR346_RS07080 PF10646 Sporulation and spore germination JR346_RS07080 PF10647 Lipoprotein LpqB beta-propeller domain JR346_RS07085 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JR346_RS07085 PF00672 HAMP domain JR346_RS07085 PF00512 His Kinase A (phospho-acceptor) domain JR346_RS07090 PF00486 Transcriptional regulatory protein, C terminal JR346_RS07090 PF00072 Response regulator receiver domain JR346_RS07110 PF00266 Aminotransferase class-V JR346_RS07115 PF00588 SpoU rRNA Methylase family JR346_RS07120 PF00766 Electron transfer flavoprotein FAD-binding domain JR346_RS07120 PF01012 Electron transfer flavoprotein domain JR346_RS07125 PF01012 Electron transfer flavoprotein domain JR346_RS07130 PF13180 PDZ domain JR346_RS07135 PF04536 TPM domain JR346_RS07140 PF04012 PspA/IM30 family JR346_RS07145 PF00485 Phosphoribulokinase / Uridine kinase family JR346_RS07165 PF00579 tRNA synthetases class I (W and Y) JR346_RS07175 PF04228 Putative neutral zinc metallopeptidase JR346_RS07180 PF00156 Phosphoribosyl transferase domain JR346_RS07185 PF10011 Predicted membrane protein (DUF2254) JR346_RS07190 PF14698 Argininosuccinate lyase C-terminal JR346_RS07190 PF00206 Lyase JR346_RS07195 PF00764 Arginosuccinate synthase JR346_RS07205 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JR346_RS07205 PF00672 HAMP domain JR346_RS07205 PF00512 His Kinase A (phospho-acceptor) domain JR346_RS07210 PF00072 Response regulator receiver domain JR346_RS07210 PF00486 Transcriptional regulatory protein, C terminal JR346_RS07220 PF02595 Glycerate kinase family JR346_RS07225 PF13193 AMP-binding enzyme C-terminal domain JR346_RS07225 PF00501 AMP-binding enzyme JR346_RS07230 PF12796 Ankyrin repeats (3 copies) JR346_RS07230 PF00023 Ankyrin repeat JR346_RS07235 PF01316 Arginine repressor, DNA binding domain JR346_RS07235 PF02863 Arginine repressor, C-terminal domain JR346_RS07240 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain JR346_RS07240 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain JR346_RS07245 PF00202 Aminotransferase class-III JR346_RS07250 PF00696 Amino acid kinase family JR346_RS07255 PF01960 ArgJ family JR346_RS07260 PF02774 Semialdehyde dehydrogenase, dimerisation domain JR346_RS07260 PF01118 Semialdehyde dehydrogenase, NAD binding domain JR346_RS07265 PF01048 Phosphorylase superfamily JR346_RS07275 PF01588 Putative tRNA binding domain JR346_RS07275 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain JR346_RS07275 PF03483 B3/4 domain JR346_RS07275 PF03484 tRNA synthetase B5 domain JR346_RS07275 PF03147 Ferredoxin-fold anticodon binding domain JR346_RS07280 PF01409 tRNA synthetases class II core domain (F) JR346_RS07280 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain JR346_RS07300 PF00293 NUDIX domain JR346_RS07305 PF00588 SpoU rRNA Methylase family JR346_RS07310 PF00881 Nitroreductase family JR346_RS07320 PF00453 Ribosomal protein L20 JR346_RS07325 PF01632 Ribosomal protein L35 JR346_RS07330 PF05198 Translation initiation factor IF-3, N-terminal domain JR346_RS07330 PF00707 Translation initiation factor IF-3, C-terminal domain JR346_RS07345 PF00977 Histidine biosynthesis protein JR346_RS07355 PF00117 Glutamine amidotransferase class-I JR346_RS07360 PF00475 Imidazoleglycerol-phosphate dehydratase JR346_RS07365 PF00155 Aminotransferase class I and II JR346_RS07375 PF01726 LexA DNA binding domain JR346_RS07375 PF00717 Peptidase S24-like JR346_RS07380 PF13307 Helicase C-terminal domain JR346_RS07385 PF01926 50S ribosome-binding GTPase JR346_RS07385 PF16360 GTP-binding GTPase Middle Region JR346_RS07385 PF13167 GTP-binding GTPase N-terminal JR346_RS07390 PF05175 Methyltransferase small domain JR346_RS07395 PF01678 Diaminopimelate epimerase JR346_RS07405 PF04055 Radical SAM superfamily JR346_RS07405 PF00919 Uncharacterized protein family UPF0004 JR346_RS07415 PF02631 RecX family JR346_RS07420 PF00154 recA bacterial DNA recombination protein JR346_RS07435 PF18146 Damage-inducible protein CinA KH domain JR346_RS07435 PF02464 Competence-damaged protein JR346_RS07435 PF00994 Probable molybdopterin binding domain JR346_RS07440 PF01066 CDP-alcohol phosphatidyltransferase JR346_RS07445 PF01580 FtsK/SpoIIIE family JR346_RS07445 PF17854 FtsK alpha domain JR346_RS07445 PF09397 Ftsk gamma domain JR346_RS07450 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain JR346_RS07450 PF12706 Beta-lactamase superfamily domain JR346_RS07450 PF17770 Ribonuclease J C-terminal domain JR346_RS07455 PF00701 Dihydrodipicolinate synthetase family JR346_RS07465 PF01113 Dihydrodipicolinate reductase, N-terminus JR346_RS07465 PF05173 Dihydrodipicolinate reductase, C-terminus JR346_RS07470 PF01757 Acyltransferase family JR346_RS07475 PF00675 Insulinase (Peptidase family M16) JR346_RS07475 PF05193 Peptidase M16 inactive domain JR346_RS07480 PF01138 3' exoribonuclease family, domain 1 JR346_RS07480 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain JR346_RS07480 PF00013 KH domain JR346_RS07480 PF00575 S1 RNA binding domain JR346_RS07485 PF00312 Ribosomal protein S15 JR346_RS07490 PF00324 Amino acid permease JR346_RS07500 PF02664 S-Ribosylhomocysteinase (LuxS) JR346_RS07505 PF01048 Phosphorylase superfamily JR346_RS07510 PF00248 Aldo/keto reductase family JR346_RS07515 PF06574 FAD synthetase JR346_RS07515 PF01687 Riboflavin kinase JR346_RS07530 PF01509 TruB family pseudouridylate synthase (N terminal domain) JR346_RS07530 PF16198 tRNA pseudouridylate synthase B C-terminal domain JR346_RS07530 PF09142 tRNA Pseudouridine synthase II, C terminal JR346_RS07535 PF02033 Ribosome-binding factor A JR346_RS07540 PF04760 Translation initiation factor IF-2, N-terminal region JR346_RS07540 PF11987 Translation-initiation factor 2 JR346_RS07540 PF00009 Elongation factor Tu GTP binding domain JR346_RS07550 PF13184 NusA-like KH domain JR346_RS07550 PF08529 NusA N-terminal domain JR346_RS07555 PF02576 RimP N-terminal domain JR346_RS07555 PF17384 RimP C-terminal SH3 domain JR346_RS07565 PF01925 Sulfite exporter TauE/SafE JR346_RS07570 PF04073 Aminoacyl-tRNA editing domain JR346_RS07570 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) JR346_RS07570 PF03129 Anticodon binding domain JR346_RS07580 PF04551 GcpE protein JR346_RS07585 PF02163 Peptidase family M50 JR346_RS07585 PF17820 PDZ domain JR346_RS07590 PF02901 Pyruvate formate lyase-like JR346_RS07590 PF01228 Glycine radical JR346_RS07595 PF02901 Pyruvate formate lyase-like JR346_RS07595 PF01228 Glycine radical JR346_RS07600 PF04055 Radical SAM superfamily JR346_RS07605 PF13288 DXP reductoisomerase C-terminal domain JR346_RS07605 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase JR346_RS07605 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain JR346_RS07615 PF00005 ABC transporter JR346_RS07615 PF00664 ABC transporter transmembrane region JR346_RS07620 PF04226 Transglycosylase associated protein JR346_RS07625 PF00474 Sodium:solute symporter family JR346_RS07645 PF01765 Ribosome recycling factor JR346_RS07650 PF00696 Amino acid kinase family JR346_RS07655 PF00889 Elongation factor TS JR346_RS07660 PF00318 Ribosomal protein S2 JR346_RS07710 PF00589 Phage integrase family JR346_RS07710 PF14659 Phage integrase, N-terminal SAM-like domain JR346_RS07720 PF13439 Glycosyltransferase Family 4 JR346_RS07720 PF00534 Glycosyl transferases group 1 JR346_RS07740 PF08278 DNA primase DnaG DnaB-binding JR346_RS07740 PF13662 Toprim domain JR346_RS07740 PF08275 DNA primase catalytic core, N-terminal domain JR346_RS07740 PF01807 CHC2 zinc finger JR346_RS07740 PF10410 DnaB-helicase binding domain of primase JR346_RS07745 PF01966 HD domain JR346_RS07745 PF13286 Phosphohydrolase-associated domain JR346_RS07755 PF01207 Dihydrouridine synthase (Dus) JR346_RS07775 PF00583 Acetyltransferase (GNAT) family JR346_RS07780 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) JR346_RS07780 PF03129 Anticodon binding domain JR346_RS07795 PF00561 alpha/beta hydrolase fold JR346_RS07800 PF01053 Cys/Met metabolism PLP-dependent enzyme JR346_RS07805 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain JR346_RS07805 PF00326 Prolyl oligopeptidase family JR346_RS07810 PF02934 GatB/GatE catalytic domain JR346_RS07810 PF02637 GatB domain JR346_RS07815 PF01425 Amidase JR346_RS07820 PF02686 Glu-tRNAGln amidotransferase C subunit JR346_RS07825 PF06737 Transglycosylase-like domain JR346_RS07825 PF01476 LysM domain JR346_RS07830 PF12826 Helix-hairpin-helix motif JR346_RS07830 PF03119 NAD-dependent DNA ligase C4 zinc finger domain JR346_RS07830 PF01653 NAD-dependent DNA ligase adenylation domain JR346_RS07830 PF03120 NAD-dependent DNA ligase OB-fold domain JR346_RS07830 PF00533 BRCA1 C Terminus (BRCT) domain JR346_RS07840 PF16701 Adenylate cyclase regulatory domain JR346_RS07840 PF00211 Adenylate and Guanylate cyclase catalytic domain JR346_RS07850 PF03099 Biotin/lipoate A/B protein ligase family JR346_RS07850 PF02237 Biotin protein ligase C terminal domain JR346_RS07850 PF08279 HTH domain JR346_RS07860 PF01039 Carboxyl transferase domain JR346_RS07875 PF01408 Oxidoreductase family, NAD-binding Rossmann fold JR346_RS07880 PF00375 Sodium:dicarboxylate symporter family JR346_RS07885 PF05088 Bacterial NAD-glutamate dehydrogenase JR346_RS07890 PF02545 Maf-like protein JR346_RS07895 PF02785 Biotin carboxylase C-terminal domain JR346_RS07895 PF00289 Biotin carboxylase, N-terminal domain JR346_RS07895 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain JR346_RS07895 PF00364 Biotin-requiring enzyme JR346_RS07900 PF07992 Pyridine nucleotide-disulphide oxidoreductase JR346_RS07900 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain JR346_RS07905 PF01048 Phosphorylase superfamily JR346_RS07910 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain JR346_RS07910 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III JR346_RS07910 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II JR346_RS07910 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I JR346_RS07915 PF01791 DeoC/LacD family aldolase JR346_RS07925 PF03461 TRCF domain JR346_RS07925 PF00271 Helicase conserved C-terminal domain JR346_RS07925 PF02559 CarD-like/TRCF domain JR346_RS07925 PF17757 UvrB interaction domain JR346_RS07925 PF00270 DEAD/DEAH box helicase JR346_RS07980 PF00534 Glycosyl transferases group 1 JR346_RS07990 PF01592 NifU-like N terminal domain JR346_RS07995 PF00266 Aminotransferase class-V JR346_RS08005 PF01195 Peptidyl-tRNA hydrolase JR346_RS08010 PF01386 Ribosomal L25p family JR346_RS08010 PF14693 Ribosomal protein TL5, C-terminal domain JR346_RS08015 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase JR346_RS08020 PF16363 GDP-mannose 4,6 dehydratase JR346_RS08025 PF00483 Nucleotidyl transferase JR346_RS08030 PF13614 AAA domain JR346_RS08045 PF13439 Glycosyltransferase Family 4 JR346_RS08045 PF00534 Glycosyl transferases group 1 JR346_RS08050 PF00535 Glycosyl transferase family 2 JR346_RS08055 PF00534 Glycosyl transferases group 1 JR346_RS08085 PF00534 Glycosyl transferases group 1 JR346_RS08090 PF08666 SAF domain JR346_RS08090 PF03102 NeuB family JR346_RS08095 PF02348 Cytidylyltransferase JR346_RS08115 PF00535 Glycosyl transferase family 2 JR346_RS08125 PF00664 ABC transporter transmembrane region JR346_RS08125 PF00005 ABC transporter JR346_RS08130 PF14572 Phosphoribosyl synthetase-associated domain JR346_RS08130 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase JR346_RS08135 PF12804 MobA-like NTP transferase domain JR346_RS08135 PF00132 Bacterial transferase hexapeptide (six repeats) JR346_RS08145 PF16326 ABC transporter C-terminal domain JR346_RS08145 PF00005 ABC transporter JR346_RS08145 PF12848 ABC transporter JR346_RS08155 PF13439 Glycosyltransferase Family 4 JR346_RS08155 PF00534 Glycosyl transferases group 1 JR346_RS08170 PF00288 GHMP kinases N terminal domain JR346_RS08170 PF08544 GHMP kinases C terminal JR346_RS08175 PF00398 Ribosomal RNA adenine dimethylase JR346_RS08185 PF01026 TatD related DNase JR346_RS08190 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases JR346_RS08195 PF02366 Dolichyl-phosphate-mannose-protein mannosyltransferase JR346_RS08195 PF16192 C-terminal four TMM region of protein-O-mannosyltransferase JR346_RS08205 PF03734 L,D-transpeptidase catalytic domain JR346_RS08205 PF17964 Bacterial Ig domain JR346_RS08215 PF02467 Transcription factor WhiB JR346_RS08225 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain JR346_RS08225 PF02222 ATP-grasp domain JR346_RS08230 PF00731 AIR carboxylase JR346_RS08235 PF03816 Cell envelope-related transcriptional attenuator domain JR346_RS08245 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded JR346_RS08255 PF00484 Carbonic anhydrase JR346_RS08260 PF10415 Fumarase C C-terminus JR346_RS08260 PF00206 Lyase JR346_RS08265 PF13344 Haloacid dehalogenase-like hydrolase JR346_RS08265 PF00293 NUDIX domain JR346_RS08275 PF01255 Putative undecaprenyl diphosphate synthase JR346_RS08290 PF02585 GlcNAc-PI de-N-acetylase JR346_RS08300 PF03449 Transcription elongation factor, N-terminal JR346_RS08300 PF01272 Transcription elongation factor, GreA/GreB, C-term JR346_RS08305 PF13291 ACT domain JR346_RS08305 PF00291 Pyridoxal-phosphate dependent enzyme JR346_RS08310 PF01594 AI-2E family transporter JR346_RS08335 PF02541 Ppx/GppA phosphatase family JR346_RS08350 PF00113 Enolase, C-terminal TIM barrel domain JR346_RS08350 PF03952 Enolase, N-terminal domain JR346_RS08355 PF03819 MazG nucleotide pyrophosphohydrolase domain JR346_RS08360 PF00962 Adenosine/AMP deaminase JR346_RS08370 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain JR346_RS08370 PF00591 Glycosyl transferase family, a/b domain JR346_RS08370 PF02885 Glycosyl transferase family, helical bundle domain JR346_RS08375 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region JR346_RS08380 PF02653 Branched-chain amino acid transport system / permease component JR346_RS08385 PF02653 Branched-chain amino acid transport system / permease component JR346_RS08390 PF00005 ABC transporter JR346_RS08400 PF04107 Glutamate-cysteine ligase family 2(GCS2) JR346_RS08400 PF01546 Peptidase family M20/M25/M40 JR346_RS08405 PF13085 2Fe-2S iron-sulfur cluster binding domain JR346_RS08410 PF02910 Fumarate reductase flavoprotein C-term JR346_RS08410 PF00890 FAD binding domain JR346_RS08420 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit JR346_RS08425 PF01050 Mannose-6-phosphate isomerase JR346_RS08425 PF00483 Nucleotidyl transferase JR346_RS08435 PF00579 tRNA synthetases class I (W and Y) JR346_RS08445 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain JR346_RS08445 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain JR346_RS08450 PF00464 Serine hydroxymethyltransferase JR346_RS08460 PF02142 MGS-like domain JR346_RS08460 PF01808 AICARFT/IMPCHase bienzyme JR346_RS08465 PF00551 Formyl transferase JR346_RS08485 PF01850 PIN domain JR346_RS08500 PF00271 Helicase conserved C-terminal domain JR346_RS08500 PF12419 SNF2 Helicase protein JR346_RS08500 PF00176 SNF2 family N-terminal domain JR346_RS08505 PF00294 pfkB family carbohydrate kinase JR346_RS08515 PF07690 Major Facilitator Superfamily JR346_RS08525 PF05661 Protein of unknown function (DUF808) JR346_RS08530 PF00248 Aldo/keto reductase family JR346_RS08540 PF09371 Tex-like protein N-terminal domain JR346_RS08540 PF17674 HHH domain JR346_RS08540 PF00575 S1 RNA binding domain JR346_RS08540 PF16921 Tex protein YqgF-like domain JR346_RS08555 PF07690 Major Facilitator Superfamily JR346_RS08560 PF00324 Amino acid permease JR346_RS08570 PF01235 Sodium:alanine symporter family JR346_RS08575 PF02390 Putative methyltransferase JR346_RS08580 PF01235 Sodium:alanine symporter family JR346_RS08585 PF13411 MerR HTH family regulatory protein JR346_RS08590 PF01556 DnaJ C terminal domain JR346_RS08590 PF00226 DnaJ domain JR346_RS08590 PF00684 DnaJ central domain JR346_RS08595 PF01025 GrpE JR346_RS08600 PF00012 Hsp70 protein JR346_RS08605 PF01451 Low molecular weight phosphotyrosine protein phosphatase JR346_RS08615 PF07690 Major Facilitator Superfamily JR346_RS08625 PF08240 Alcohol dehydrogenase GroES-like domain JR346_RS08625 PF00107 Zinc-binding dehydrogenase JR346_RS08635 PF00005 ABC transporter JR346_RS08640 PF09819 ABC-type cobalt transport system, permease component JR346_RS08665 PF00692 dUTPase JR346_RS08690 PF02683 Cytochrome C biogenesis protein transmembrane region JR346_RS08690 PF17991 Thioredoxin like C-terminal domain JR346_RS08690 PF00578 AhpC/TSA family JR346_RS08695 PF00324 Amino acid permease JR346_RS08700 PF05425 Copper resistance protein D JR346_RS08700 PF09678 Cytochrome c oxidase caa3 assembly factor (Caa3_CtaG) JR346_RS08720 PF00216 Bacterial DNA-binding protein JR346_RS08725 PF00253 Ribosomal protein S14p/S29e JR346_RS08730 PF00471 Ribosomal protein L33 JR346_RS08735 PF00830 Ribosomal L28 family JR346_RS08745 PF00005 ABC transporter JR346_RS08750 PF01032 FecCD transport family JR346_RS08755 PF01032 FecCD transport family JR346_RS08760 PF01497 Periplasmic binding protein JR346_RS08765 PF01757 Acyltransferase family JR346_RS08775 PF00005 ABC transporter JR346_RS08790 PF01156 Inosine-uridine preferring nucleoside hydrolase JR346_RS08820 PF08032 RNA 2'-O ribose methyltransferase substrate binding JR346_RS08820 PF00588 SpoU rRNA Methylase family JR346_RS08825 PF09190 DALR domain JR346_RS08825 PF01406 tRNA synthetases class I (C) catalytic domain JR346_RS08830 PF02542 YgbB family JR346_RS08835 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase JR346_RS08840 PF02559 CarD-like/TRCF domain JR346_RS08850 PF00128 Alpha amylase, catalytic domain JR346_RS08880 PF00196 Bacterial regulatory proteins, luxR family JR346_RS08880 PF00072 Response regulator receiver domain JR346_RS08890 PF08240 Alcohol dehydrogenase GroES-like domain JR346_RS08890 PF13823 Alcohol dehydrogenase GroES-associated JR346_RS08890 PF00107 Zinc-binding dehydrogenase JR346_RS08895 PF00072 Response regulator receiver domain JR346_RS08895 PF00486 Transcriptional regulatory protein, C terminal JR346_RS08900 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JR346_RS08900 PF00512 His Kinase A (phospho-acceptor) domain JR346_RS08905 PF01895 PhoU domain JR346_RS08920 PF00300 Histidine phosphatase superfamily (branch 1) JR346_RS08930 PF01053 Cys/Met metabolism PLP-dependent enzyme JR346_RS08935 PF02223 Thymidylate kinase JR346_RS08940 PF12169 DNA polymerase III subunits gamma and tau domain III JR346_RS08945 PF01238 Phosphomannose isomerase type I JR346_RS08950 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II JR346_RS08950 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III JR346_RS08950 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain JR346_RS08950 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I JR346_RS08955 PF16326 ABC transporter C-terminal domain JR346_RS08955 PF00005 ABC transporter JR346_RS08955 PF12848 ABC transporter JR346_RS08960 PF00970 Oxidoreductase FAD-binding domain JR346_RS08960 PF00175 Oxidoreductase NAD-binding domain JR346_RS08960 PF00042 Globin JR346_RS08965 PF02082 Transcriptional regulator JR346_RS08975 PF00005 ABC transporter JR346_RS08980 PF17297 Phosphoenolpyruvate carboxykinase N-terminal domain JR346_RS08980 PF00821 Phosphoenolpyruvate carboxykinase C-terminal P-loop domain JR346_RS08990 PF00111 2Fe-2S iron-sulfur cluster binding domain JR346_RS09005 PF00270 DEAD/DEAH box helicase JR346_RS09005 PF08494 DEAD/H associated JR346_RS09005 PF00271 Helicase conserved C-terminal domain JR346_RS09015 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain JR346_RS09015 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain JR346_RS09025 PF00849 RNA pseudouridylate synthase JR346_RS09035 PF01740 STAS domain JR346_RS09035 PF00916 Sulfate permease family JR346_RS09085 PF00444 Ribosomal protein L36 JR346_RS09135 PF13333 Integrase core domain JR346_RS09135 PF00665 Integrase core domain JR346_RS09135 PF13276 HTH-like domain JR346_RS09160 PF00324 Amino acid permease JR346_RS09165 PF00324 Amino acid permease JR346_RS09175 PF00440 Bacterial regulatory proteins, tetR family JR346_RS09175 PF13977 BetI-type transcriptional repressor, C-terminal JR346_RS09200 PF04973 Nicotinamide mononucleotide transporter JR346_RS09215 PF12169 DNA polymerase III subunits gamma and tau domain III JR346_RS09220 PF13662 Toprim domain JR346_RS09220 PF02132 RecR protein JR346_RS09235 PF01842 ACT domain JR346_RS09235 PF13840 ACT domain JR346_RS09235 PF00696 Amino acid kinase family JR346_RS09250 PF10633 NPCBM-associated, NEW3 domain of alpha-galactosidase JR346_RS09250 PF00754 F5/8 type C domain JR346_RS09250 PF13088 BNR repeat-like domain JR346_RS09260 PF02700 Phosphoribosylformylglycinamidine (FGAM) synthase JR346_RS09270 PF00586 AIR synthase related protein, N-terminal domain JR346_RS09270 PF02769 AIR synthase related protein, C-terminal domain JR346_RS09270 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain JR346_RS09280 PF02378 Phosphotransferase system, EIIC JR346_RS09280 PF00367 phosphotransferase system, EIIB JR346_RS09280 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 JR346_RS09290 PF13673 Acetyltransferase (GNAT) domain JR346_RS09305 PF00528 Binding-protein-dependent transport system inner membrane component JR346_RS09310 PF00528 Binding-protein-dependent transport system inner membrane component JR346_RS09320 PF00005 ABC transporter JR346_RS09320 PF08352 Oligopeptide/dipeptide transporter, C-terminal region JR346_RS09340 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain JR346_RS09340 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain JR346_RS09345 PF13396 Phospholipase_D-nuclease N-terminal JR346_RS09345 PF13091 PLD-like domain JR346_RS09350 PF00296 Luciferase-like monooxygenase JR346_RS09355 PF13193 AMP-binding enzyme C-terminal domain JR346_RS09355 PF16177 Acetyl-coenzyme A synthetase N-terminus JR346_RS09355 PF00501 AMP-binding enzyme JR346_RS09375 PF00005 ABC transporter JR346_RS09380 PF00528 Binding-protein-dependent transport system inner membrane component JR346_RS09385 PF00497 Bacterial extracellular solute-binding proteins, family 3 JR346_RS09390 PF01053 Cys/Met metabolism PLP-dependent enzyme JR346_RS09405 PF13380 CoA binding domain JR346_RS09415 PF09335 SNARE associated Golgi protein JR346_RS09430 PF00920 Dehydratase family JR346_RS09435 PF18395 Cas3 C-terminal domain JR346_RS09435 PF00270 DEAD/DEAH box helicase JR346_RS09435 PF18019 HD domain JR346_RS09440 PF09481 CRISPR-associated protein Cse1 (CRISPR_cse1) JR346_RS09465 PF01867 CRISPR associated protein Cas1 JR346_RS09470 PF09707 CRISPR-associated protein (Cas_Cas2CT1978) JR346_RS09475 PF00196 Bacterial regulatory proteins, luxR family JR346_RS09475 PF00072 Response regulator receiver domain JR346_RS09480 PF07730 Histidine kinase JR346_RS09480 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JR346_RS09485 PF07702 UTRA domain JR346_RS09485 PF00392 Bacterial regulatory proteins, gntR family JR346_RS09490 PF00128 Alpha amylase, catalytic domain JR346_RS09490 PF16657 Maltogenic Amylase, C-terminal domain JR346_RS09495 PF00487 Fatty acid desaturase JR346_RS09500 PF00175 Oxidoreductase NAD-binding domain JR346_RS09500 PF00111 2Fe-2S iron-sulfur cluster binding domain JR346_RS09500 PF00970 Oxidoreductase FAD-binding domain JR346_RS09540 PF00171 Aldehyde dehydrogenase family JR346_RS09550 PF04607 Region found in RelA / SpoT proteins JR346_RS09595 PF00709 Adenylosuccinate synthetase JR346_RS09600 PF13860 FlgD Ig-like domain JR346_RS09600 PF02225 PA domain JR346_RS09600 PF00082 Subtilase family JR346_RS09600 PF05922 Peptidase inhibitor I9 JR346_RS09610 PF02540 NAD synthase JR346_RS09620 PF02127 Aminopeptidase I zinc metalloprotease (M18) JR346_RS09630 PF02517 CPBP intramembrane metalloprotease JR346_RS09645 PF09594 Glycosyltransferase family 87 JR346_RS09665 PF01464 Transglycosylase SLT domain JR346_RS09670 PF03009 Glycerophosphoryl diester phosphodiesterase family JR346_RS09680 PF00392 Bacterial regulatory proteins, gntR family JR346_RS09680 PF07702 UTRA domain JR346_RS09685 PF04962 KduI/IolB family JR346_RS09695 PF02894 Oxidoreductase family, C-terminal alpha/beta domain JR346_RS09695 PF01408 Oxidoreductase family, NAD-binding Rossmann fold JR346_RS09700 PF02894 Oxidoreductase family, C-terminal alpha/beta domain JR346_RS09700 PF01408 Oxidoreductase family, NAD-binding Rossmann fold JR346_RS09705 PF01261 Xylose isomerase-like TIM barrel JR346_RS09710 PF00356 Bacterial regulatory proteins, lacI family JR346_RS09710 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family JR346_RS09715 PF00083 Sugar (and other) transporter JR346_RS09720 PF01261 Xylose isomerase-like TIM barrel JR346_RS09725 PF02894 Oxidoreductase family, C-terminal alpha/beta domain JR346_RS09725 PF01408 Oxidoreductase family, NAD-binding Rossmann fold JR346_RS09730 PF01261 Xylose isomerase-like TIM barrel JR346_RS09735 PF00171 Aldehyde dehydrogenase family JR346_RS09740 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain JR346_RS09740 PF00205 Thiamine pyrophosphate enzyme, central domain JR346_RS09740 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain JR346_RS09750 PF00294 pfkB family carbohydrate kinase JR346_RS09770 PF03610 PTS system fructose IIA component JR346_RS09775 PF00874 PRD domain JR346_RS09775 PF03123 CAT RNA binding domain JR346_RS09795 PF00857 Isochorismatase family JR346_RS09800 PF00248 Aldo/keto reductase family JR346_RS09810 PF07690 Major Facilitator Superfamily JR346_RS09815 PF01431 Peptidase family M13 JR346_RS09815 PF05649 Peptidase family M13 JR346_RS09820 PF03746 LamB/YcsF family JR346_RS09825 PF02682 Carboxyltransferase domain, subdomain C and D JR346_RS09830 PF00364 Biotin-requiring enzyme JR346_RS09830 PF02785 Biotin carboxylase C-terminal domain JR346_RS09830 PF00289 Biotin carboxylase, N-terminal domain JR346_RS09830 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain JR346_RS09840 PF01566 Natural resistance-associated macrophage protein JR346_RS09850 PF01297 Zinc-uptake complex component A periplasmic JR346_RS09860 PF00005 ABC transporter JR346_RS09865 PF00950 ABC 3 transport family JR346_RS09870 PF02696 Uncharacterized ACR, YdiU/UPF0061 family JR346_RS09880 PF01381 Helix-turn-helix JR346_RS09885 PF01965 DJ-1/PfpI family JR346_RS09905 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain JR346_RS09905 PF02777 Iron/manganese superoxide dismutases, C-terminal domain JR346_RS09910 PF02574 Homocysteine S-methyltransferase JR346_RS09915 PF00324 Amino acid permease JR346_RS09930 PF06965 Na+/H+ antiporter 1 JR346_RS09935 PF13460 NAD(P)H-binding JR346_RS09935 PF11066 Protein of unknown function (DUF2867) JR346_RS09940 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain JR346_RS09940 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain JR346_RS09940 PF00205 Thiamine pyrophosphate enzyme, central domain JR346_RS09945 PF01235 Sodium:alanine symporter family JR346_RS09950 PF02872 5'-nucleotidase, C-terminal domain JR346_RS09950 PF00746 LPXTG cell wall anchor motif JR346_RS09950 PF00149 Calcineurin-like phosphoesterase JR346_RS09950 PF00565 Staphylococcal nuclease homologue JR346_RS09960 PF03441 FAD binding domain of DNA photolyase JR346_RS09960 PF00875 DNA photolyase JR346_RS09975 PF16697 Inner membrane component of T3SS, cytoplasmic domain JR346_RS09985 PF01098 Cell cycle protein JR346_RS09990 PF00905 Penicillin binding protein transpeptidase domain JR346_RS09995 PF00069 Protein kinase domain JR346_RS10000 PF03793 PASTA domain JR346_RS10000 PF00069 Protein kinase domain JR346_RS10005 PF00117 Glutamine amidotransferase class-I JR346_RS10015 PF04203 Sortase domain JR346_RS10020 PF06781 Cell division protein CrgA JR346_RS10030 PF04264 YceI-like domain JR346_RS10035 PF00232 Glycosyl hydrolase family 1 JR346_RS10040 PF03466 LysR substrate binding domain JR346_RS10040 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JR346_RS10045 PF01810 LysE type translocator JR346_RS10055 PF02836 Glycosyl hydrolases family 2, TIM barrel domain JR346_RS10055 PF00703 Glycosyl hydrolases family 2 JR346_RS10055 PF16353 Domain of unknown function(DUF4981) JR346_RS10055 PF02837 Glycosyl hydrolases family 2, sugar binding domain JR346_RS10055 PF02929 Beta galactosidase small chain JR346_RS10060 PF00719 Inorganic pyrophosphatase JR346_RS10095 PF00296 Luciferase-like monooxygenase JR346_RS10105 PF00724 NADH:flavin oxidoreductase / NADH oxidase family JR346_RS10125 PF07739 TipAS antibiotic-recognition domain JR346_RS10125 PF13411 MerR HTH family regulatory protein JR346_RS10130 PF00772 DnaB-like helicase N terminal domain JR346_RS10130 PF03796 DnaB-like helicase C terminal domain JR346_RS10130 PF14528 LAGLIDADG-like domain JR346_RS10160 PF02595 Glycerate kinase family JR346_RS10165 PF03458 UPF0126 domain JR346_RS10170 PF00893 Small Multidrug Resistance protein JR346_RS10180 PF03948 Ribosomal protein L9, C-terminal domain JR346_RS10180 PF01281 Ribosomal protein L9, N-terminal domain JR346_RS10185 PF01084 Ribosomal protein S18 JR346_RS10190 PF00436 Single-strand binding protein family JR346_RS10195 PF01250 Ribosomal protein S6 JR346_RS10210 PF00196 Bacterial regulatory proteins, luxR family JR346_RS10210 PF00072 Response regulator receiver domain JR346_RS10215 PF07730 Histidine kinase JR346_RS10225 PF00005 ABC transporter JR346_RS10230 PF01743 Poly A polymerase head domain JR346_RS10230 PF01966 HD domain JR346_RS10230 PF12627 Probable RNA and SrmB- binding site of polymerase A JR346_RS10235 PF00293 NUDIX domain JR346_RS10250 PF07992 Pyridine nucleotide-disulphide oxidoreductase JR346_RS10255 PF00085 Thioredoxin JR346_RS10260 PF01226 Formate/nitrite transporter JR346_RS10270 PF17762 HTH domain found in ParB protein JR346_RS10270 PF02195 ParB-like nuclease domain JR346_RS10275 PF13614 AAA domain JR346_RS10280 PF02527 rRNA small subunit methyltransferase G JR346_RS10290 PF02096 60Kd inner membrane protein JR346_RS10295 PF01809 Putative membrane protein insertion efficiency factor JR346_RS10300 PF00825 Ribonuclease P JR346_RS10305 PF00468 Ribosomal protein L34