RGE_RS00015 PF00308 Bacterial dnaA protein RGE_RS00015 PF08299 Bacterial dnaA protein helix-turn-helix RGE_RS00015 PF11638 DnaA N-terminal domain RGE_RS00020 PF00712 DNA polymerase III beta subunit, N-terminal domain RGE_RS00020 PF02767 DNA polymerase III beta subunit, central domain RGE_RS00020 PF02768 DNA polymerase III beta subunit, C-terminal domain RGE_RS00025 PF00204 DNA gyrase B RGE_RS00025 PF00986 DNA gyrase B subunit, carboxyl terminus RGE_RS00025 PF01751 Toprim domain RGE_RS00025 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RGE_RS00030 PF03167 Uracil DNA glycosylase superfamily RGE_RS00045 PF13676 TIR domain RGE_RS00050 PF13560 Helix-turn-helix domain RGE_RS00055 PF07804 HipA-like C-terminal domain RGE_RS00055 PF07805 HipA-like N-terminal domain RGE_RS00055 PF13657 HipA N-terminal domain RGE_RS00060 PF06508 Queuosine biosynthesis protein QueC RGE_RS00065 PF02321 Outer membrane efflux protein RGE_RS00070 PF00873 AcrB/AcrD/AcrF family RGE_RS00075 PF13533 Biotin-lipoyl like RGE_RS00075 PF16576 RGE_RS00075 RGE_RS00080 PF07859 alpha/beta hydrolase fold RGE_RS00085 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RGE_RS00085 PF03466 LysR substrate binding domain RGE_RS00090 PF03280 Proteobacterial lipase chaperone protein RGE_RS00095 PF00561 alpha/beta hydrolase fold RGE_RS00100 PF04244 Deoxyribodipyrimidine photo-lyase-related protein RGE_RS00105 PF05161 MOFRL family RGE_RS00105 PF13660 Domain of unknown function (DUF4147) RGE_RS00110 PF00675 Insulinase (Peptidase family M16) RGE_RS00110 PF05193 Peptidase M16 inactive domain RGE_RS00115 PF13563 2'-5' RNA ligase superfamily RGE_RS00120 PF04352 ProQ/FINO family RGE_RS00125 PF01433 Peptidase family M1 RGE_RS00125 PF11838 ERAP1-like C-terminal domain RGE_RS00130 PF00990 GGDEF domain RGE_RS00135 PF12697 Alpha/beta hydrolase family RGE_RS00140 PF06240 Carbon monoxide dehydrogenase subunit G (CoxG) RGE_RS00150 PF06041 Bacterial protein of unknown function (DUF924) RGE_RS00155 PF13416 Bacterial extracellular solute-binding protein RGE_RS00160 PF01575 MaoC like domain RGE_RS00165 PF07298 RGE_RS00165 RGE_RS00175 PF00497 Bacterial extracellular solute-binding proteins, family 3 RGE_RS00180 PF14344 RGE_RS00180 RGE_RS00185 PF05981 RGE_RS00185 RGE_RS00190 PF02678 Pirin RGE_RS00190 PF05726 Pirin C-terminal cupin domain RGE_RS00195 PF03781 Sulfatase-modifying factor enzyme 1 RGE_RS00195 PF12867 DinB superfamily RGE_RS00200 PF10017 RGE_RS00200 RGE_RS00205 PF04248 Domain of unknown function (DUF427) RGE_RS00215 PF07589 RGE_RS00215 RGE_RS00220 PF13414 TPR repeat RGE_RS00220 PF13432 Tetratricopeptide repeat RGE_RS00220 PF14559 Tetratricopeptide repeat RGE_RS00225 PF13098 Thioredoxin-like domain RGE_RS00230 PF00462 Glutaredoxin RGE_RS00235 PF00561 alpha/beta hydrolase fold RGE_RS00240 PF00005 ABC transporter RGE_RS00245 PF12679 RGE_RS00245 RGE_RS00250 PF11127 Protein of unknown function (DUF2892) RGE_RS00255 PF00027 Cyclic nucleotide-binding domain RGE_RS00255 PF13545 Crp-like helix-turn-helix domain RGE_RS00260 PF03692 RGE_RS00260 RGE_RS00265 PF09834 RGE_RS00265 RGE_RS00270 PF01134 Glucose inhibited division protein A RGE_RS00270 PF13932 GidA associated domain 3 RGE_RS00275 PF02527 rRNA small subunit methyltransferase G RGE_RS00280 PF13614 AAA domain RGE_RS00285 PF00583 Acetyltransferase (GNAT) family RGE_RS00290 PF01118 Semialdehyde dehydrogenase, NAD binding domain RGE_RS00295 PF06821 Serine hydrolase RGE_RS00300 PF02195 ParB-like nuclease domain RGE_RS00305 PF06798 RGE_RS00305 RGE_RS00305 PF08298 PrkA AAA domain RGE_RS00310 PF04285 RGE_RS00310 RGE_RS00315 PF04293 RGE_RS00315 RGE_RS00320 PF01565 FAD binding domain RGE_RS00320 PF02913 FAD linked oxidases, C-terminal domain RGE_RS00325 PF13202 EF hand RGE_RS00330 PF00793 DAHP synthetase I family RGE_RS00335 PF00291 Pyridoxal-phosphate dependent enzyme RGE_RS00335 PF01842 ACT domain RGE_RS00340 PF01523 Putative modulator of DNA gyrase RGE_RS00350 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases RGE_RS00355 PF02021 Uncharacterised protein family UPF0102 RGE_RS00360 PF13580 SIS domain RGE_RS00365 PF04972 BON domain RGE_RS00370 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase RGE_RS00370 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase RGE_RS00375 PF00437 Type II/IV secretion system protein RGE_RS00380 PF00027 Cyclic nucleotide-binding domain RGE_RS00385 PF00437 Type II/IV secretion system protein RGE_RS00390 PF01168 Alanine racemase, N-terminal domain RGE_RS00400 PF01037 AsnC family RGE_RS00400 PF13412 Winged helix-turn-helix DNA-binding RGE_RS00405 PF00171 Aldehyde dehydrogenase family RGE_RS00405 PF01619 Proline dehydrogenase RGE_RS00405 PF14850 DNA-binding domain of Proline dehydrogenase RGE_RS00410 PF00085 Thioredoxin RGE_RS00410 PF14561 Tetratricopeptide repeat RGE_RS00415 PF03401 Tripartite tricarboxylate transporter family receptor RGE_RS00420 PF00691 OmpA family RGE_RS00420 PF13488 RGE_RS00420 RGE_RS00425 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase RGE_RS00425 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain RGE_RS00430 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RGE_RS00430 PF03466 LysR substrate binding domain RGE_RS00435 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain RGE_RS00435 PF08447 PAS fold RGE_RS00440 PF00210 Ferritin-like domain RGE_RS00445 PF00009 Elongation factor Tu GTP binding domain RGE_RS00445 PF16658 RGE_RS00445 RGE_RS00450 PF13532 2OG-Fe(II) oxygenase superfamily RGE_RS00455 PF03167 Uracil DNA glycosylase superfamily RGE_RS00455 PF13566 RGE_RS00455 RGE_RS00465 PF01040 UbiA prenyltransferase family RGE_RS00470 PF03807 NADP oxidoreductase coenzyme F420-dependent RGE_RS00470 PF14748 Pyrroline-5-carboxylate reductase dimerisation RGE_RS00475 PF00270 DEAD/DEAH box helicase RGE_RS00475 PF00271 Helicase conserved C-terminal domain RGE_RS00475 PF17191 RGE_RS00475 RGE_RS00480 PF02547 Queuosine biosynthesis protein RGE_RS00485 PF01702 Queuine tRNA-ribosyltransferase RGE_RS00495 PF04378 Ribosomal RNA small subunit methyltransferase D, RsmJ RGE_RS00500 PF00724 NADH:flavin oxidoreductase / NADH oxidase family RGE_RS00505 PF05145 RGE_RS00505 RGE_RS00510 PF03473 MOSC domain RGE_RS00515 PF00821 Phosphoenolpyruvate carboxykinase RGE_RS00520 PF00149 Calcineurin-like phosphoesterase RGE_RS00525 PF00582 Universal stress protein family RGE_RS00530 PF00440 Bacterial regulatory proteins, tetR family RGE_RS00540 PF00012 Hsp70 protein RGE_RS00545 PF03695 Uncharacterised protein family (UPF0149) RGE_RS00550 PF00171 Aldehyde dehydrogenase family RGE_RS00555 PF00990 GGDEF domain RGE_RS00560 PF00528 Binding-protein-dependent transport system inner membrane component RGE_RS00565 PF00005 ABC transporter RGE_RS00570 PF13379 NMT1-like family RGE_RS00575 PF03006 RGE_RS00575 RGE_RS00580 PF02450 Lecithin:cholesterol acyltransferase RGE_RS00580 PF12770 RGE_RS00580 RGE_RS00585 PF03330 Rare lipoprotein A (RlpA)-like double-psi beta-barrel RGE_RS00585 PF05036 Sporulation related domain RGE_RS00590 PF00860 Permease family RGE_RS00600 PF07690 Major Facilitator Superfamily RGE_RS00605 PF01144 Coenzyme A transferase RGE_RS00610 PF01144 Coenzyme A transferase RGE_RS00615 PF07883 Cupin domain RGE_RS00620 PF13561 Enoyl-(Acyl carrier protein) reductase RGE_RS00625 PF04199 Putative cyclase RGE_RS00630 PF05853 Prokaryotic protein of unknown function (DUF849) RGE_RS00635 PF13545 Crp-like helix-turn-helix domain RGE_RS00640 PF01262 Alanine dehydrogenase/PNT, C-terminal domain RGE_RS00640 PF05222 Alanine dehydrogenase/PNT, N-terminal domain RGE_RS00645 PF12769 Domain of unknown function (DUF3814) RGE_RS00650 PF02233 NAD(P) transhydrogenase beta subunit RGE_RS00655 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RGE_RS00655 PF03466 LysR substrate binding domain RGE_RS00660 PF03600 Citrate transporter RGE_RS00665 PF07287 RGE_RS00665 RGE_RS00675 PF01144 Coenzyme A transferase RGE_RS00680 PF01144 Coenzyme A transferase RGE_RS00685 PF01515 Phosphate acetyl/butaryl transferase RGE_RS00685 PF01575 MaoC like domain RGE_RS00690 PF00871 Acetokinase family RGE_RS00695 PF00108 Thiolase, N-terminal domain RGE_RS00695 PF02803 Thiolase, C-terminal domain RGE_RS00705 PF07690 Major Facilitator Superfamily RGE_RS00710 PF03061 Thioesterase superfamily RGE_RS00720 PF07690 Major Facilitator Superfamily RGE_RS00725 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain RGE_RS00725 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain RGE_RS00730 PF07642 RGE_RS00730 RGE_RS00735 PF07690 Major Facilitator Superfamily RGE_RS00740 PF04909 Amidohydrolase RGE_RS00750 PF13442 Cytochrome C oxidase, cbb3-type, subunit III RGE_RS00755 PF11161 RGE_RS00755 RGE_RS00760 PF00561 alpha/beta hydrolase fold RGE_RS00765 PF13474 SnoaL-like domain RGE_RS00770 PF00551 Formyl transferase RGE_RS00770 PF01842 ACT domain RGE_RS00775 PF00072 Response regulator receiver domain RGE_RS00775 PF00512 His Kinase A (phospho-acceptor) domain RGE_RS00775 PF00672 HAMP domain RGE_RS00775 PF01627 Hpt domain RGE_RS00775 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RGE_RS00790 PF00512 His Kinase A (phospho-acceptor) domain RGE_RS00790 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RGE_RS00790 PF08447 PAS fold RGE_RS00795 PF10276 Zinc-finger domain RGE_RS00800 PF01063 Aminotransferase class IV RGE_RS00810 PF12850 Calcineurin-like phosphoesterase superfamily domain RGE_RS00815 PF13481 AAA domain RGE_RS00820 PF00472 RF-1 domain RGE_RS00825 PF00842 Alanine racemase, C-terminal domain RGE_RS00825 PF01168 Alanine racemase, N-terminal domain RGE_RS00830 PF07690 Major Facilitator Superfamily RGE_RS00835 PF00892 EamA-like transporter family RGE_RS00840 PF00072 Response regulator receiver domain RGE_RS00845 PF00255 Glutathione peroxidase RGE_RS00850 PF00155 Aminotransferase class I and II RGE_RS00855 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RGE_RS00855 PF03466 LysR substrate binding domain RGE_RS00865 PF00528 Binding-protein-dependent transport system inner membrane component RGE_RS00870 PF00528 Binding-protein-dependent transport system inner membrane component RGE_RS00875 PF01928 CYTH domain RGE_RS00880 PF13609 Gram-negative porin RGE_RS00885 PF00005 ABC transporter RGE_RS00885 PF08352 Oligopeptide/dipeptide transporter, C-terminal region RGE_RS00890 PF00005 ABC transporter RGE_RS00895 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle RGE_RS00900 PF01425 Amidase RGE_RS00910 PF09350 RGE_RS00910 RGE_RS00915 PF02566 OsmC-like protein RGE_RS00920 PF13302 Acetyltransferase (GNAT) domain RGE_RS00925 PF13460 NADH(P)-binding RGE_RS00930 PF04542 Sigma-70 region 2 RGE_RS00930 PF08281 Sigma-70, region 4 RGE_RS00935 PF00816 H-NS histone family RGE_RS00940 PF00370 FGGY family of carbohydrate kinases, N-terminal domain RGE_RS00940 PF02782 FGGY family of carbohydrate kinases, C-terminal domain RGE_RS00945 PF02311 AraC-like ligand binding domain RGE_RS00945 PF12833 Helix-turn-helix domain RGE_RS00950 PF05960 Bacterial protein of unknown function (DUF885) RGE_RS00955 PF00892 EamA-like transporter family RGE_RS00960 PF02754 RGE_RS00960 RGE_RS00960 PF12838 4Fe-4S dicluster domain RGE_RS00965 PF13649 Methyltransferase domain RGE_RS00970 PF01565 FAD binding domain RGE_RS00975 PF01565 FAD binding domain RGE_RS00975 PF02913 FAD linked oxidases, C-terminal domain RGE_RS00980 PF00069 Protein kinase domain RGE_RS00985 PF08495 RGE_RS00985 RGE_RS00985 PF10442 RGE_RS00985 RGE_RS00995 PF01963 RGE_RS00995 RGE_RS01000 PF01557 Fumarylacetoacetate (FAA) hydrolase family RGE_RS01010 PF12091 RGE_RS01010 RGE_RS01015 PF02574 Homocysteine S-methyltransferase RGE_RS01020 PF01343 Peptidase family S49 RGE_RS01025 PF03547 RGE_RS01025 RGE_RS01030 PF09335 RGE_RS01030 RGE_RS01035 PF03458 RGE_RS01035 RGE_RS01040 PF00270 DEAD/DEAH box helicase RGE_RS01040 PF00271 Helicase conserved C-terminal domain RGE_RS01045 PF01208 Uroporphyrinogen decarboxylase (URO-D) RGE_RS01055 PF04011 LemA family RGE_RS01060 PF04536 TLP18 RGE_RS01065 PF04536 TLP18 RGE_RS01075 PF02625 XdhC and CoxI family RGE_RS01075 PF13478 XdhC Rossmann domain RGE_RS01080 PF03976 Polyphosphate kinase 2 (PPK2) RGE_RS01085 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain RGE_RS01085 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain RGE_RS01090 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain RGE_RS01090 PF02874 ATP synthase alpha/beta family, beta-barrel domain RGE_RS01095 PF00231 ATP synthase RGE_RS01100 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain RGE_RS01100 PF00306 ATP synthase alpha/beta chain, C terminal domain RGE_RS01100 PF02874 ATP synthase alpha/beta family, beta-barrel domain RGE_RS01105 PF00213 ATP synthase delta (OSCP) subunit RGE_RS01110 PF00430 ATP synthase B/B' CF(0) RGE_RS01115 PF00137 ATP synthase subunit C RGE_RS01120 PF00119 ATP synthase A chain RGE_RS01125 PF03899 RGE_RS01125 RGE_RS01130 PF02683 RGE_RS01130 RGE_RS01130 PF11412 Disulphide bond corrector protein DsbC RGE_RS01130 PF13899 Thioredoxin-like RGE_RS01135 PF01266 FAD dependent oxidoreductase RGE_RS01135 PF16901 RGE_RS01135 RGE_RS01140 PF08450 SMP-30/Gluconolaconase/LRE-like region RGE_RS01145 PF01263 Aldose 1-epimerase RGE_RS01150 PF00583 Acetyltransferase (GNAT) family RGE_RS01155 PF01292 Prokaryotic cytochrome b561 RGE_RS01160 PF01322 Cytochrome C' RGE_RS01165 PF01411 tRNA synthetases class II (A) RGE_RS01165 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain RGE_RS01170 PF02567 Phenazine biosynthesis-like protein RGE_RS01175 PF00155 Aminotransferase class I and II RGE_RS01180 PF00892 EamA-like transporter family RGE_RS01185 PF00155 Aminotransferase class I and II RGE_RS01185 PF00392 Bacterial regulatory proteins, gntR family RGE_RS01195 PF00005 ABC transporter RGE_RS01195 PF12848 ABC transporter RGE_RS01195 PF16326 RGE_RS01195 RGE_RS01200 PF00464 Serine hydroxymethyltransferase RGE_RS01205 PF02951 Prokaryotic glutathione synthetase, N-terminal domain RGE_RS01205 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain RGE_RS01210 PF03594 RGE_RS01210 RGE_RS01215 PF02705 RGE_RS01215 RGE_RS01220 PF08886 Glutamate-cysteine ligase RGE_RS01225 PF00909 Ammonium Transporter Family RGE_RS01230 PF00543 Nitrogen regulatory protein P-II RGE_RS01235 PF01078 Magnesium chelatase, subunit ChlI RGE_RS01235 PF13335 RGE_RS01235 RGE_RS01235 PF13541 Subunit ChlI of Mg-chelatase RGE_RS01240 PF00809 Pterin binding enzyme RGE_RS01240 PF02310 B12 binding domain RGE_RS01240 PF02607 B12 binding domain RGE_RS01240 PF02965 Vitamin B12 dependent methionine synthase, activation domain RGE_RS01245 PF01380 SIS domain RGE_RS01245 PF01418 Helix-turn-helix domain, rpiR family RGE_RS01245 PF02685 Glucokinase RGE_RS01250 PF02685 Glucokinase RGE_RS01255 PF02264 LamB porin RGE_RS01260 PF03714 Bacterial pullanase-associated domain RGE_RS01265 PF00128 Alpha amylase, catalytic domain RGE_RS01270 PF00528 Binding-protein-dependent transport system inner membrane component RGE_RS01275 PF00528 Binding-protein-dependent transport system inner membrane component RGE_RS01275 PF14785 Maltose transport system permease protein MalF P2 domain RGE_RS01280 PF13416 Bacterial extracellular solute-binding protein RGE_RS01285 PF00005 ABC transporter RGE_RS01285 PF08402 TOBE domain RGE_RS01290 PF09851 RGE_RS01290 RGE_RS01295 PF00128 Alpha amylase, catalytic domain RGE_RS01300 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) RGE_RS01300 PF03714 Bacterial pullanase-associated domain RGE_RS01300 PF11852 Domain of unknown function (DUF3372) RGE_RS01305 PF00580 UvrD/REP helicase N-terminal domain RGE_RS01305 PF13361 UvrD-like helicase C-terminal domain RGE_RS01310 PF08534 Redoxin RGE_RS01315 PF00072 Response regulator receiver domain RGE_RS01315 PF04397 LytTr DNA-binding domain RGE_RS01320 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RGE_RS01320 PF06580 RGE_RS01320 RGE_RS01325 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RGE_RS01325 PF03466 LysR substrate binding domain RGE_RS01330 PF02082 Transcriptional regulator RGE_RS01335 PF06808 RGE_RS01335 RGE_RS01340 PF04290 RGE_RS01340 RGE_RS01345 PF03480 Bacterial extracellular solute-binding protein, family 7 RGE_RS01350 PF04264 YceI-like domain RGE_RS01355 PF04264 YceI-like domain RGE_RS01360 PF01292 Prokaryotic cytochrome b561 RGE_RS01365 PF00293 NUDIX domain RGE_RS01365 PF15916 RGE_RS01365 RGE_RS01370 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase RGE_RS01370 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain RGE_RS01375 PF01037 AsnC family RGE_RS01375 PF13412 Winged helix-turn-helix DNA-binding RGE_RS01380 PF00990 GGDEF domain RGE_RS01385 PF00990 GGDEF domain RGE_RS01390 PF00892 EamA-like transporter family RGE_RS01395 PF03562 MltA specific insert domain RGE_RS01395 PF06725 3D domain RGE_RS01400 PF00999 Sodium/hydrogen exchanger family RGE_RS01405 PF04107 Glutamate-cysteine ligase family 2(GCS2) RGE_RS01415 PF10136 RGE_RS01415 RGE_RS01420 PF04379 Protein of unknown function (DUF525) RGE_RS01425 PF00834 Ribulose-phosphate 3 epimerase family RGE_RS01435 PF09832 Uncharacterized protein conserved in bacteria (DUF2059) RGE_RS01440 PF02653 RGE_RS01440 RGE_RS01445 PF02653 RGE_RS01445 RGE_RS01450 PF13458 Periplasmic binding protein RGE_RS01455 PF00005 ABC transporter RGE_RS01460 PF00005 ABC transporter RGE_RS01460 PF12399 Branched-chain amino acid ATP-binding cassette transporter RGE_RS01465 PF01614 Bacterial transcriptional regulator RGE_RS01465 PF09339 IclR helix-turn-helix domain RGE_RS01470 PF01037 AsnC family RGE_RS01470 PF13404 AsnC-type helix-turn-helix domain RGE_RS01475 PF03435 Saccharopine dehydrogenase RGE_RS01475 PF16653 RGE_RS01475 RGE_RS01480 PF13419 Haloacid dehalogenase-like hydrolase RGE_RS01485 PF16036 RGE_RS01485 RGE_RS01490 PF00425 chorismate binding enzyme RGE_RS01490 PF04715 Anthranilate synthase component I, N terminal region RGE_RS01495 PF00117 Glutamine amidotransferase class-I RGE_RS01500 PF00591 Glycosyl transferase family, a/b domain RGE_RS01500 PF02885 Glycosyl transferase family, helical bundle domain RGE_RS01505 PF00218 Indole-3-glycerol phosphate synthase RGE_RS01510 PF03167 Uracil DNA glycosylase superfamily RGE_RS01530 PF00009 Elongation factor Tu GTP binding domain RGE_RS01530 PF03143 Elongation factor Tu C-terminal domain RGE_RS01530 PF03144 Elongation factor Tu domain 2 RGE_RS01540 PF00584 SecE/Sec61-gamma subunits of protein translocation complex RGE_RS01545 PF02357 Transcription termination factor nusG RGE_RS01550 PF00298 Ribosomal protein L11, RNA binding domain RGE_RS01550 PF03946 Ribosomal protein L11, N-terminal domain RGE_RS01555 PF00687 Ribosomal protein L1p/L10e family RGE_RS01560 PF00466 Ribosomal protein L10 RGE_RS01565 PF00542 Ribosomal protein L7/L12 C-terminal domain RGE_RS01565 PF16320 RGE_RS01565 RGE_RS01570 PF00562 RNA polymerase Rpb2, domain 6 RGE_RS01570 PF04560 RNA polymerase Rpb2, domain 7 RGE_RS01570 PF04561 RNA polymerase Rpb2, domain 2 RGE_RS01570 PF04563 RNA polymerase beta subunit RGE_RS01570 PF04565 RNA polymerase Rpb2, domain 3 RGE_RS01570 PF10385 RNA polymerase beta subunit external 1 domain RGE_RS01575 PF00623 RNA polymerase Rpb1, domain 2 RGE_RS01575 PF04983 RNA polymerase Rpb1, domain 3 RGE_RS01575 PF04997 RNA polymerase Rpb1, domain 1 RGE_RS01575 PF04998 RNA polymerase Rpb1, domain 5 RGE_RS01575 PF05000 RNA polymerase Rpb1, domain 4 RGE_RS01580 PF13470 RGE_RS01580 RGE_RS01585 PF00164 Ribosomal protein S12/S23 RGE_RS01590 PF00177 Ribosomal protein S7p/S5e RGE_RS01595 PF00009 Elongation factor Tu GTP binding domain RGE_RS01595 PF00679 Elongation factor G C-terminus RGE_RS01595 PF03144 Elongation factor Tu domain 2 RGE_RS01595 PF03764 Elongation factor G, domain IV RGE_RS01595 PF14492 Elongation Factor G, domain II RGE_RS01600 PF00009 Elongation factor Tu GTP binding domain RGE_RS01600 PF03143 Elongation factor Tu C-terminal domain RGE_RS01600 PF03144 Elongation factor Tu domain 2 RGE_RS01605 PF00338 Ribosomal protein S10p/S20e RGE_RS01610 PF00297 Ribosomal protein L3 RGE_RS01615 PF00573 Ribosomal protein L4/L1 family RGE_RS01620 PF00276 Ribosomal protein L23 RGE_RS01625 PF00181 Ribosomal Proteins L2, RNA binding domain RGE_RS01625 PF03947 Ribosomal Proteins L2, C-terminal domain RGE_RS01630 PF00203 Ribosomal protein S19 RGE_RS01635 PF00237 Ribosomal protein L22p/L17e RGE_RS01640 PF00189 Ribosomal protein S3, C-terminal domain RGE_RS01640 PF07650 KH domain RGE_RS01645 PF00252 Ribosomal protein L16p/L10e RGE_RS01650 PF00831 Ribosomal L29 protein RGE_RS01655 PF00366 Ribosomal protein S17 RGE_RS01660 PF08534 Redoxin RGE_RS01665 PF00238 Ribosomal protein L14p/L23e RGE_RS01670 PF17136 RGE_RS01670 RGE_RS01675 PF00281 Ribosomal protein L5 RGE_RS01675 PF00673 ribosomal L5P family C-terminus RGE_RS01680 PF00253 Ribosomal protein S14p/S29e RGE_RS01685 PF00410 Ribosomal protein S8 RGE_RS01690 PF00347 Ribosomal protein L6 RGE_RS01695 PF00861 Ribosomal L18p/L5e family RGE_RS01700 PF00333 Ribosomal protein S5, N-terminal domain RGE_RS01700 PF03719 Ribosomal protein S5, C-terminal domain RGE_RS01705 PF00327 Ribosomal protein L30p/L7e RGE_RS01710 PF00828 Ribosomal protein L18e/L15 RGE_RS01715 PF00344 SecY translocase RGE_RS01720 PF01176 Translation initiation factor 1A / IF-1 RGE_RS01725 PF00444 Ribosomal protein L36 RGE_RS01730 PF00416 Ribosomal protein S13/S18 RGE_RS01735 PF00411 Ribosomal protein S11 RGE_RS01740 PF00163 Ribosomal protein S4/S9 N-terminal domain RGE_RS01740 PF01479 S4 domain RGE_RS01745 PF01000 RNA polymerase Rpb3/RpoA insert domain RGE_RS01745 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain RGE_RS01745 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain RGE_RS01750 PF01196 Ribosomal protein L17 RGE_RS01760 PF07993 Male sterility protein RGE_RS01765 PF00501 AMP-binding enzyme RGE_RS01775 PF17131 RGE_RS01775 RGE_RS01780 PF02687 RGE_RS01780 RGE_RS01785 PF00005 ABC transporter RGE_RS01790 PF00201 UDP-glucoronosyl and UDP-glucosyl transferase RGE_RS01795 PF07589 RGE_RS01795 RGE_RS01800 PF00132 Bacterial transferase hexapeptide (six repeats) RGE_RS01805 PF13432 Tetratricopeptide repeat RGE_RS01805 PF14559 Tetratricopeptide repeat RGE_RS01820 PF00082 Subtilase family RGE_RS01825 PF01694 Rhomboid family RGE_RS01830 PF00563 EAL domain RGE_RS01835 PF00034 Cytochrome c RGE_RS01835 PF03150 Di-haem cytochrome c peroxidase RGE_RS01840 PF03706 RGE_RS01840 RGE_RS01845 PF13091 PLD-like domain RGE_RS01850 PF03372 Endonuclease/Exonuclease/phosphatase family RGE_RS01860 PF00465 Iron-containing alcohol dehydrogenase RGE_RS01865 PF04055 Radical SAM superfamily RGE_RS01865 PF13353 4Fe-4S single cluster domain RGE_RS01870 PF13597 Anaerobic ribonucleoside-triphosphate reductase RGE_RS01875 PF03477 ATP cone domain RGE_RS01875 PF13597 Anaerobic ribonucleoside-triphosphate reductase RGE_RS01880 PF01136 RGE_RS01880 RGE_RS01885 PF01136 RGE_RS01885 RGE_RS01890 PF02036 SCP-2 sterol transfer family RGE_RS01895 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain RGE_RS01895 PF12729 RGE_RS01895 RGE_RS01900 PF01515 Phosphate acetyl/butaryl transferase RGE_RS01900 PF01575 MaoC like domain RGE_RS01905 PF00871 Acetokinase family RGE_RS01910 PF07167 RGE_RS01910 RGE_RS01910 PF12551 RGE_RS01910 RGE_RS01920 PF00586 AIR synthase related protein, N-terminal domain RGE_RS01920 PF02769 AIR synthase related protein, C-terminal domain RGE_RS01925 PF12974 ABC transporter, phosphonate, periplasmic substrate-binding protein RGE_RS01930 PF00005 ABC transporter RGE_RS01935 PF00528 Binding-protein-dependent transport system inner membrane component RGE_RS01940 PF00528 Binding-protein-dependent transport system inner membrane component RGE_RS01945 PF01370 NAD dependent epimerase/dehydratase family RGE_RS01950 PF13365 Trypsin-like peptidase domain RGE_RS01955 PF07238 PilZ domain RGE_RS01975 PF14907 Uncharacterised nucleotidyltransferase RGE_RS01980 PF13432 Tetratricopeptide repeat RGE_RS01980 PF14559 Tetratricopeptide repeat RGE_RS01985 PF00072 Response regulator receiver domain RGE_RS01985 PF00158 Sigma-54 interaction domain RGE_RS01985 PF02954 Bacterial regulatory protein, Fis family RGE_RS01990 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RGE_RS01995 PF02397 RGE_RS01995 RGE_RS02000 PF02563 Polysaccharide biosynthesis/export protein RGE_RS02000 PF10531 SLBB domain RGE_RS02005 PF02706 Chain length determinant protein RGE_RS02005 PF13807 RGE_RS02005 RGE_RS02010 PF13614 AAA domain RGE_RS02020 PF13401 AAA domain RGE_RS02025 PF02350 UDP-N-acetylglucosamine 2-epimerase RGE_RS02030 PF01522 Polysaccharide deacetylase RGE_RS02030 PF11959 RGE_RS02030 RGE_RS02035 PF13480 Acetyltransferase (GNAT) domain RGE_RS02040 PF13692 Glycosyl transferases group 1 RGE_RS02045 PF09721 RGE_RS02045 RGE_RS02045 PF11984 RGE_RS02045 RGE_RS02050 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain RGE_RS02050 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain RGE_RS02050 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain RGE_RS02055 PF13439 Glycosyltransferase Family 4 RGE_RS02055 PF13692 Glycosyl transferases group 1 RGE_RS02060 PF00733 Asparagine synthase RGE_RS02060 PF13537 Glutamine amidotransferase domain RGE_RS02065 PF00534 Glycosyl transferases group 1 RGE_RS02065 PF13579 Glycosyl transferase 4-like domain RGE_RS02070 PF00534 Glycosyl transferases group 1 RGE_RS02070 PF13439 Glycosyltransferase Family 4 RGE_RS02075 PF00501 AMP-binding enzyme RGE_RS02080 PF04932 RGE_RS02080 RGE_RS02095 PF00535 Glycosyl transferase family 2 RGE_RS02100 PF00534 Glycosyl transferases group 1 RGE_RS02100 PF13579 Glycosyl transferase 4-like domain RGE_RS02105 PF13579 Glycosyl transferase 4-like domain RGE_RS02105 PF13692 Glycosyl transferases group 1 RGE_RS02110 PF00733 Asparagine synthase RGE_RS02110 PF13537 Glutamine amidotransferase domain RGE_RS02115 PF00535 Glycosyl transferase family 2 RGE_RS02120 PF00535 Glycosyl transferase family 2 RGE_RS02125 PF00535 Glycosyl transferase family 2 RGE_RS02130 PF01522 Polysaccharide deacetylase RGE_RS02135 PF00005 ABC transporter RGE_RS02135 PF14524 Wzt C-terminal domain RGE_RS02140 PF01061 RGE_RS02140 RGE_RS02145 PF13439 Glycosyltransferase Family 4 RGE_RS02145 PF13692 Glycosyl transferases group 1 RGE_RS02160 PF00535 Glycosyl transferase family 2 RGE_RS02170 PF13440 RGE_RS02170 RGE_RS02170 PF14667 Polysaccharide biosynthesis C-terminal domain RGE_RS02180 PF01757 RGE_RS02180 RGE_RS02185 PF05050 Methyltransferase FkbM domain RGE_RS02195 PF00733 Asparagine synthase RGE_RS02210 PF04892 RGE_RS02210 RGE_RS02215 PF02699 Preprotein translocase subunit RGE_RS02220 PF02355 Protein export membrane protein RGE_RS02220 PF07549 SecD/SecF GG Motif RGE_RS02220 PF13721 SecD export protein N-terminal TM region RGE_RS02225 PF02355 Protein export membrane protein RGE_RS02225 PF07549 SecD/SecF GG Motif RGE_RS02230 PF07793 RGE_RS02230 RGE_RS02235 PF04361 RGE_RS02235 RGE_RS02240 PF02481 DNA recombination-mediator protein A RGE_RS02245 PF01476 LysM domain RGE_RS02250 PF01327 Polypeptide deformylase RGE_RS02255 PF00551 Formyl transferase RGE_RS02255 PF02911 Formyl transferase, C-terminal domain RGE_RS02265 PF10988 Protein of unknown function (DUF2807) RGE_RS02270 PF03591 RGE_RS02270 RGE_RS02275 PF05437 RGE_RS02275 RGE_RS02280 PF00162 Phosphoglycerate kinase RGE_RS02285 PF00390 Malic enzyme, N-terminal domain RGE_RS02285 PF01515 Phosphate acetyl/butaryl transferase RGE_RS02285 PF03949 Malic enzyme, NAD binding domain RGE_RS02290 PF00224 Pyruvate kinase, barrel domain RGE_RS02290 PF02887 Pyruvate kinase, alpha/beta domain RGE_RS02295 PF01116 Fructose-bisphosphate aldolase class-II RGE_RS02300 PF01259 SAICAR synthetase RGE_RS02310 PF00731 AIR carboxylase RGE_RS02315 PF02222 ATP-grasp domain RGE_RS02320 PF01300 Telomere recombination RGE_RS02320 PF03481 Putative GTP-binding controlling metal-binding RGE_RS02330 PF00657 GDSL-like Lipase/Acylhydrolase RGE_RS02335 PF03922 OmpW family RGE_RS02340 PF04193 PQ loop repeat RGE_RS02345 PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family RGE_RS02350 PF00814 Glycoprotease family RGE_RS02355 PF13673 Acetyltransferase (GNAT) domain RGE_RS02360 PF03167 Uracil DNA glycosylase superfamily RGE_RS02365 PF00512 His Kinase A (phospho-acceptor) domain RGE_RS02365 PF13426 PAS domain RGE_RS02370 PF00132 Bacterial transferase hexapeptide (six repeats) RGE_RS02370 PF12804 MobA-like NTP transferase domain RGE_RS02380 PF13590 Domain of unknown function (DUF4136) RGE_RS02385 PF01171 PP-loop family RGE_RS02390 PF02152 Dihydroneopterin aldolase RGE_RS02395 PF13561 Enoyl-(Acyl carrier protein) reductase RGE_RS02400 PF02636 Putative S-adenosyl-L-methionine-dependent methyltransferase RGE_RS02405 PF11146 RGE_RS02405 RGE_RS02410 PF01743 Poly A polymerase head domain RGE_RS02410 PF01966 HD domain RGE_RS02410 PF12627 Probable RNA and SrmB- binding site of polymerase A RGE_RS02415 PF13417 Glutathione S-transferase, N-terminal domain RGE_RS02420 PF13460 NADH(P)-binding RGE_RS02425 PF01464 Transglycosylase SLT domain RGE_RS02425 PF14718 Soluble lytic murein transglycosylase L domain RGE_RS02430 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RGE_RS02430 PF03466 LysR substrate binding domain RGE_RS02435 PF11142 RGE_RS02435 RGE_RS02440 PF04993 TfoX N-terminal domain RGE_RS02445 PF01812 5-formyltetrahydrofolate cyclo-ligase family RGE_RS02450 PF00082 Subtilase family RGE_RS02450 PF04151 Bacterial pre-peptidase C-terminal domain RGE_RS02455 PF03922 OmpW family RGE_RS02460 PF02219 Methylenetetrahydrofolate reductase RGE_RS02465 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain RGE_RS02465 PF05221 S-adenosyl-L-homocysteine hydrolase RGE_RS02470 PF03976 Polyphosphate kinase 2 (PPK2) RGE_RS02475 PF08282 haloacid dehalogenase-like hydrolase RGE_RS02485 PF02222 ATP-grasp domain RGE_RS02490 PF13690 Chemotaxis phosphatase CheX RGE_RS02495 PF00072 Response regulator receiver domain RGE_RS02500 PF02016 LD-carboxypeptidase RGE_RS02505 PF07804 HipA-like C-terminal domain RGE_RS02505 PF07805 HipA-like N-terminal domain RGE_RS02505 PF13657 HipA N-terminal domain RGE_RS02515 PF00438 S-adenosylmethionine synthetase, N-terminal domain RGE_RS02515 PF02772 S-adenosylmethionine synthetase, central domain RGE_RS02515 PF02773 S-adenosylmethionine synthetase, C-terminal domain RGE_RS02520 PF03279 RGE_RS02520 RGE_RS02525 PF03279 RGE_RS02525 RGE_RS02530 PF01678 Diaminopimelate epimerase RGE_RS02535 PF04340 Protein of unknown function, DUF484 RGE_RS02540 PF00589 Phage integrase family RGE_RS02540 PF02899 Phage integrase, N-terminal SAM-like domain RGE_RS02545 PF10672 S-adenosylmethionine-dependent methyltransferase RGE_RS02550 PF04391 RGE_RS02550 RGE_RS02555 PF01037 AsnC family RGE_RS02555 PF13412 Winged helix-turn-helix DNA-binding RGE_RS02560 PF01380 SIS domain RGE_RS02560 PF13522 Glutamine amidotransferase domain RGE_RS02570 PF02627 Carboxymuconolactone decarboxylase family RGE_RS02580 PF09391 Protein of unknown function (DUF2000) RGE_RS02585 PF02311 AraC-like ligand binding domain RGE_RS02585 PF12833 Helix-turn-helix domain RGE_RS02590 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RGE_RS02590 PF03466 LysR substrate binding domain RGE_RS02595 PF00701 Dihydrodipicolinate synthetase family RGE_RS02600 PF13609 Gram-negative porin RGE_RS02605 PF00083 Sugar (and other) transporter RGE_RS02610 PF01228 Glycine radical RGE_RS02610 PF02901 Pyruvate formate lyase RGE_RS02615 PF04055 Radical SAM superfamily RGE_RS02615 PF13353 4Fe-4S single cluster domain RGE_RS02620 PF01515 Phosphate acetyl/butaryl transferase RGE_RS02625 PF01226 Formate/nitrite transporter RGE_RS02635 PF01557 Fumarylacetoacetate (FAA) hydrolase family RGE_RS02640 PF03358 NADPH-dependent FMN reductase RGE_RS02645 PF00149 Calcineurin-like phosphoesterase RGE_RS02645 PF02872 5'-nucleotidase, C-terminal domain RGE_RS02660 PF11769 RGE_RS02660 RGE_RS02670 PF00009 Elongation factor Tu GTP binding domain RGE_RS02670 PF00679 Elongation factor G C-terminus RGE_RS02670 PF03144 Elongation factor Tu domain 2 RGE_RS02670 PF03764 Elongation factor G, domain IV RGE_RS02670 PF14492 Elongation Factor G, domain II RGE_RS02675 PF06123 RGE_RS02675 RGE_RS02680 PF00512 His Kinase A (phospho-acceptor) domain RGE_RS02680 PF00672 HAMP domain RGE_RS02680 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RGE_RS02680 PF14827 Sensory domain of two-component sensor kinase RGE_RS02685 PF00072 Response regulator receiver domain RGE_RS02685 PF00486 Transcriptional regulatory protein, C terminal RGE_RS02695 PF13561 Enoyl-(Acyl carrier protein) reductase RGE_RS02700 PF04962 KduI/IolB family RGE_RS02705 PF04074 Domain of unknown function (DUF386) RGE_RS02710 PF03812 RGE_RS02710 RGE_RS02715 PF00294 pfkB family carbohydrate kinase RGE_RS02720 PF00392 Bacterial regulatory proteins, gntR family RGE_RS02720 PF07729 FCD domain RGE_RS02725 PF01322 Cytochrome C' RGE_RS02735 PF13450 NAD(P)-binding Rossmann-like domain RGE_RS02745 PF05706 Cyclin-dependent kinase inhibitor 3 (CDKN3) RGE_RS02750 PF00753 Metallo-beta-lactamase superfamily RGE_RS02765 PF13641 Glycosyltransferase like family 2 RGE_RS02785 PF14235 RGE_RS02785 RGE_RS02800 PF12796 Ankyrin repeats (3 copies) RGE_RS02850 PF00816 H-NS histone family RGE_RS02855 PF03401 Tripartite tricarboxylate transporter family receptor RGE_RS02860 PF00072 Response regulator receiver domain RGE_RS02860 PF00512 His Kinase A (phospho-acceptor) domain RGE_RS02860 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RGE_RS02860 PF08448 PAS fold RGE_RS02870 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RGE_RS02870 PF03466 LysR substrate binding domain RGE_RS02875 PF03788 RGE_RS02875 RGE_RS02880 PF04172 RGE_RS02880 RGE_RS02885 PF01297 Periplasmic solute binding protein family RGE_RS02890 PF00950 RGE_RS02890 RGE_RS02895 PF00005 ABC transporter RGE_RS02900 PF01475 Ferric uptake regulator family RGE_RS02905 PF00245 Alkaline phosphatase RGE_RS02910 PF07603 RGE_RS02910 RGE_RS02915 PF12833 Helix-turn-helix domain RGE_RS02920 PF04072 Leucine carboxyl methyltransferase RGE_RS02925 PF00593 TonB dependent receptor RGE_RS02925 PF07715 TonB-dependent Receptor Plug Domain RGE_RS02930 PF07690 Major Facilitator Superfamily RGE_RS02935 PF00005 ABC transporter RGE_RS02935 PF00664 ABC transporter transmembrane region RGE_RS02940 PF00005 ABC transporter RGE_RS02940 PF00664 ABC transporter transmembrane region RGE_RS02945 PF00593 TonB dependent receptor RGE_RS02945 PF07715 TonB-dependent Receptor Plug Domain RGE_RS02950 PF04102 SlyX RGE_RS02965 PF00501 AMP-binding enzyme RGE_RS02965 PF13193 AMP-binding enzyme C-terminal domain RGE_RS02970 PF06055 RGE_RS02970 RGE_RS02975 PF10636 Hemin uptake protein hemP RGE_RS02980 PF05171 Haemin-degrading HemS RGE_RS02990 PF00593 TonB dependent receptor RGE_RS02990 PF07715 TonB-dependent Receptor Plug Domain RGE_RS02995 PF02514 RGE_RS02995 RGE_RS03000 PF01618 RGE_RS03000 RGE_RS03005 PF09919 RGE_RS03005 RGE_RS03015 PF00210 Ferritin-like domain RGE_RS03020 PF10116 RGE_RS03020 RGE_RS03025 PF14103 RGE_RS03025 RGE_RS03030 PF13175 AAA ATPase domain RGE_RS03030 PF13304 AAA domain RGE_RS03045 PF04011 LemA family RGE_RS03050 PF01322 Cytochrome C' RGE_RS03055 PF13649 Methyltransferase domain RGE_RS03060 PF00122 E1-E2 ATPase RGE_RS03060 PF00403 Heavy-metal-associated domain RGE_RS03060 PF00702 haloacid dehalogenase-like hydrolase RGE_RS03065 PF13411 MerR HTH family regulatory protein RGE_RS03075 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain RGE_RS03075 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain RGE_RS03080 PF00005 ABC transporter RGE_RS03080 PF03459 TOBE domain RGE_RS03085 PF00528 Binding-protein-dependent transport system inner membrane component RGE_RS03090 PF13531 Bacterial extracellular solute-binding protein RGE_RS03095 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RGE_RS03095 PF03459 TOBE domain RGE_RS03100 PF03459 TOBE domain RGE_RS03105 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily RGE_RS03105 PF14696 Hydroxyphenylpyruvate dioxygenase, HPPD, N-terminal RGE_RS03125 PF13561 Enoyl-(Acyl carrier protein) reductase RGE_RS03135 PF13411 MerR HTH family regulatory protein RGE_RS03140 PF02627 Carboxymuconolactone decarboxylase family RGE_RS03145 PF00583 Acetyltransferase (GNAT) family RGE_RS03150 PF08241 Methyltransferase domain RGE_RS03160 PF09932 RGE_RS03160 RGE_RS03165 PF00583 Acetyltransferase (GNAT) family RGE_RS03165 PF13419 Haloacid dehalogenase-like hydrolase RGE_RS03175 PF00583 Acetyltransferase (GNAT) family RGE_RS03180 PF07883 Cupin domain RGE_RS03190 PF13302 Acetyltransferase (GNAT) domain RGE_RS03200 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily RGE_RS03205 PF00378 Enoyl-CoA hydratase/isomerase family RGE_RS03215 PF00753 Metallo-beta-lactamase superfamily RGE_RS03220 PF00581 Rhodanese-like domain RGE_RS03225 PF03601 RGE_RS03225 RGE_RS03230 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RGE_RS03230 PF03466 LysR substrate binding domain RGE_RS03240 PF01883 Domain of unknown function DUF59 RGE_RS03245 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases RGE_RS03250 PF02239 Cytochrome D1 heme domain RGE_RS03250 PF13442 Cytochrome C oxidase, cbb3-type, subunit III RGE_RS03255 PF00034 Cytochrome c RGE_RS03260 PF13442 Cytochrome C oxidase, cbb3-type, subunit III RGE_RS03265 PF02239 Cytochrome D1 heme domain RGE_RS03285 PF04055 Radical SAM superfamily RGE_RS03285 PF13353 4Fe-4S single cluster domain RGE_RS03290 PF02239 Cytochrome D1 heme domain RGE_RS03290 PF13442 Cytochrome C oxidase, cbb3-type, subunit III RGE_RS03295 PF00034 Cytochrome c RGE_RS03300 PF00557 Metallopeptidase family M24 RGE_RS03305 PF11903 RGE_RS03305 RGE_RS03310 PF13378 Enolase C-terminal domain-like RGE_RS03315 PF12697 Alpha/beta hydrolase family RGE_RS03320 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain RGE_RS03325 PF00425 chorismate binding enzyme RGE_RS03330 PF08479 POTRA domain, ShlB-type RGE_RS03335 PF05860 haemagglutination activity domain RGE_RS03335 PF07581 RGE_RS03335 RGE_RS03340 PF00512 His Kinase A (phospho-acceptor) domain RGE_RS03340 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RGE_RS03340 PF08447 PAS fold RGE_RS03345 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain RGE_RS03345 PF00672 HAMP domain RGE_RS03345 PF12729 RGE_RS03345 RGE_RS03360 PF00665 Integrase core domain RGE_RS03365 PF01695 IstB-like ATP binding protein RGE_RS03370 PF09707 CRISPR-associated protein (Cas_Cas2CT1978) RGE_RS03375 PF01867 CRISPR associated protein Cas1 RGE_RS03380 PF08798 CRISPR associated protein RGE_RS03385 PF09704 CRISPR-associated protein (Cas_Cas5) RGE_RS03390 PF09344 CT1975-like protein RGE_RS03395 PF09485 CRISPR-associated protein Cse2 (CRISPR_cse2) RGE_RS03400 PF09481 CRISPR-associated protein Cse1 (CRISPR_cse1) RGE_RS03405 PF00271 Helicase conserved C-terminal domain RGE_RS03410 PF04542 Sigma-70 region 2 RGE_RS03410 PF08281 Sigma-70, region 4 RGE_RS03415 PF04773 FecR protein RGE_RS03415 PF16220 RGE_RS03415 RGE_RS03420 PF00593 TonB dependent receptor RGE_RS03420 PF07715 TonB-dependent Receptor Plug Domain RGE_RS03430 PF00733 Asparagine synthase RGE_RS03445 PF01425 Amidase RGE_RS03450 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain RGE_RS03450 PF05227 CHASE3 domain RGE_RS03455 PF01584 CheW-like domain RGE_RS03460 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain RGE_RS03460 PF12729 RGE_RS03460 RGE_RS03485 PF03313 RGE_RS03485 RGE_RS03485 PF03315 Serine dehydratase beta chain RGE_RS03495 PF00072 Response regulator receiver domain RGE_RS03495 PF04397 LytTr DNA-binding domain RGE_RS03500 PF13470 RGE_RS03500 RGE_RS03505 PF12728 Helix-turn-helix domain RGE_RS03510 PF00027 Cyclic nucleotide-binding domain RGE_RS03510 PF13545 Crp-like helix-turn-helix domain RGE_RS03515 PF00092 von Willebrand factor type A domain RGE_RS03520 PF12801 RGE_RS03520 RGE_RS03525 PF07728 AAA domain (dynein-related subfamily) RGE_RS03525 PF08406 RGE_RS03525 RGE_RS03530 PF00115 Cytochrome C and Quinol oxidase polypeptide I RGE_RS03535 PF00034 Cytochrome c RGE_RS03540 PF01814 Hemerythrin HHE cation binding domain RGE_RS03565 PF00440 Bacterial regulatory proteins, tetR family RGE_RS03565 PF13305 WHG domain RGE_RS03570 PF00171 Aldehyde dehydrogenase family RGE_RS03575 PF02613 Nitrate reductase delta subunit RGE_RS03580 PF13671 AAA domain RGE_RS03585 PF00583 Acetyltransferase (GNAT) family RGE_RS03595 PF03007 RGE_RS03595 RGE_RS03595 PF06974 RGE_RS03595 RGE_RS03600 PF03007 RGE_RS03600 RGE_RS03600 PF06974 RGE_RS03600 RGE_RS03610 PF00512 His Kinase A (phospho-acceptor) domain RGE_RS03610 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RGE_RS03615 PF13180 PDZ domain RGE_RS03615 PF13365 Trypsin-like peptidase domain RGE_RS03620 PF00512 His Kinase A (phospho-acceptor) domain RGE_RS03620 PF00672 HAMP domain RGE_RS03620 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RGE_RS03620 PF08521 RGE_RS03620 RGE_RS03625 PF00072 Response regulator receiver domain RGE_RS03625 PF00486 Transcriptional regulatory protein, C terminal RGE_RS03635 PF03060 Nitronate monooxygenase RGE_RS03640 PF04247 RGE_RS03640 RGE_RS03645 PF01814 Hemerythrin HHE cation binding domain RGE_RS03650 PF00365 Phosphofructokinase RGE_RS03655 PF12697 Alpha/beta hydrolase family RGE_RS03660 PF00583 Acetyltransferase (GNAT) family RGE_RS03660 PF13549 ATP-grasp domain RGE_RS03660 PF13607 Succinyl-CoA ligase like flavodoxin domain RGE_RS03665 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RGE_RS03665 PF03466 LysR substrate binding domain RGE_RS03670 PF01810 RGE_RS03670 RGE_RS03675 PF00210 Ferritin-like domain RGE_RS03680 PF04324 BFD-like [2Fe-2S] binding domain RGE_RS03690 PF12697 Alpha/beta hydrolase family RGE_RS03695 PF00183 Hsp90 protein RGE_RS03695 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RGE_RS03705 PF01636 Phosphotransferase enzyme family RGE_RS03710 PF10881 RGE_RS03710 RGE_RS03715 PF00583 Acetyltransferase (GNAT) family RGE_RS03720 PF00572 Ribosomal protein L13 RGE_RS03725 PF00380 Ribosomal protein S9/S16 RGE_RS03730 PF01521 Iron-sulphur cluster biosynthesis RGE_RS03735 PF03702 Uncharacterised protein family (UPF0075) RGE_RS03740 PF01551 Peptidase family M23 RGE_RS03745 PF00579 tRNA synthetases class I (W and Y) RGE_RS03745 PF01479 S4 domain RGE_RS03750 PF01545 Cation efflux family RGE_RS03750 PF16916 RGE_RS03750 RGE_RS03755 PF02580 D-Tyr-tRNA(Tyr) deacylase RGE_RS03760 PF03401 Tripartite tricarboxylate transporter family receptor RGE_RS03765 PF03401 Tripartite tricarboxylate transporter family receptor RGE_RS03770 PF00501 AMP-binding enzyme RGE_RS03770 PF14535 AMP-binding enzyme C-terminal domain RGE_RS03780 PF00005 ABC transporter RGE_RS03785 PF13458 Periplasmic binding protein RGE_RS03790 PF02653 RGE_RS03790 RGE_RS03795 PF02653 RGE_RS03795 RGE_RS03800 PF00005 ABC transporter RGE_RS03800 PF12399 Branched-chain amino acid ATP-binding cassette transporter RGE_RS03805 PF00501 AMP-binding enzyme RGE_RS03810 PF00027 Cyclic nucleotide-binding domain RGE_RS03810 PF13545 Crp-like helix-turn-helix domain RGE_RS03815 PF00675 Insulinase (Peptidase family M16) RGE_RS03815 PF05193 Peptidase M16 inactive domain RGE_RS03820 PF00561 alpha/beta hydrolase fold RGE_RS03825 PF06189 RGE_RS03825 RGE_RS03830 PF10986 RGE_RS03830 RGE_RS03835 PF00005 ABC transporter RGE_RS03840 PF02687 RGE_RS03840 RGE_RS03840 PF12704 MacB-like periplasmic core domain RGE_RS03845 PF11736 Protein of unknown function (DUF3299) RGE_RS03850 PF01594 RGE_RS03850 RGE_RS03855 PF01734 Patatin-like phospholipase RGE_RS03860 PF00990 GGDEF domain RGE_RS03860 PF07695 RGE_RS03860 RGE_RS03860 PF07696 7TMR-DISM extracellular 2 RGE_RS03865 PF00004 ATPase family associated with various cellular activities (AAA) RGE_RS03875 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain RGE_RS03875 PF00672 HAMP domain RGE_RS03875 PF12729 RGE_RS03875 RGE_RS03880 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain RGE_RS03880 PF00672 HAMP domain RGE_RS03880 PF12729 RGE_RS03880 RGE_RS03885 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain RGE_RS03885 PF00672 HAMP domain RGE_RS03885 PF12729 RGE_RS03885 RGE_RS03890 PF00482 Type II secretion system (T2SS), protein F RGE_RS03895 PF00437 Type II/IV secretion system protein RGE_RS03900 PF00263 RGE_RS03900 RGE_RS03900 PF03958 Bacterial type II/III secretion system short domain RGE_RS03905 PF01203 RGE_RS03905 RGE_RS03910 PF04612 Type II secretion system (T2SS), protein M RGE_RS03915 PF05134 Type II secretion system (T2SS), protein L RGE_RS03915 PF12693 GspL periplasmic domain RGE_RS03920 PF03934 Type II secretion system (T2SS), protein K RGE_RS03925 PF11612 Type II secretion system (T2SS), protein J RGE_RS03925 PF13633 Prokaryotic N-terminal methylation site RGE_RS03930 PF02501 Type II secretion system (T2SS), protein I RGE_RS03930 PF13633 Prokaryotic N-terminal methylation site RGE_RS03935 PF13633 Prokaryotic N-terminal methylation site RGE_RS03940 PF08334 Type II secretion system (T2SS), protein G RGE_RS03940 PF13544 RGE_RS03940 RGE_RS03945 PF11356 Type IV pilus biogenesis RGE_RS03950 PF02277 Phosphoribosyltransferase RGE_RS03955 PF00291 Pyridoxal-phosphate dependent enzyme RGE_RS03955 PF00585 C-terminal regulatory domain of Threonine dehydratase RGE_RS03960 PF02566 OsmC-like protein RGE_RS03965 PF03232 RGE_RS03965 RGE_RS03970 PF00528 Binding-protein-dependent transport system inner membrane component RGE_RS03975 PF00528 Binding-protein-dependent transport system inner membrane component RGE_RS03975 PF12911 RGE_RS03975 RGE_RS03980 PF00005 ABC transporter RGE_RS03980 PF08352 Oligopeptide/dipeptide transporter, C-terminal region RGE_RS03985 PF00005 ABC transporter RGE_RS03985 PF08352 Oligopeptide/dipeptide transporter, C-terminal region RGE_RS03990 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain RGE_RS03990 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain RGE_RS03995 PF01491 Frataxin-like domain RGE_RS04000 PF00905 Penicillin binding protein transpeptidase domain RGE_RS04000 PF00912 Transglycosylase RGE_RS04000 PF17092 RGE_RS04000 RGE_RS04005 PF11104 Type IV pilus assembly protein PilM; RGE_RS04015 PF04350 Pilus assembly protein, PilO RGE_RS04020 PF04351 Pilus assembly protein, PilP RGE_RS04025 PF00263 RGE_RS04025 RGE_RS04025 PF03958 Bacterial type II/III secretion system short domain RGE_RS04025 PF07660 Secretin and TonB N terminus short domain RGE_RS04025 PF11741 AMIN domain RGE_RS04035 PF01202 Shikimate kinase RGE_RS04040 PF01761 3-dehydroquinate synthase RGE_RS04045 PF01966 HD domain RGE_RS04045 PF13286 Phosphohydrolase-associated domain RGE_RS04050 PF01797 Transposase IS200 like RGE_RS04055 PF00310 Glutamine amidotransferases class-II RGE_RS04055 PF01493 GXGXG motif RGE_RS04055 PF01645 Conserved region in glutamate synthase RGE_RS04055 PF04898 Glutamate synthase central domain RGE_RS04060 PF07992 Pyridine nucleotide-disulphide oxidoreductase RGE_RS04060 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster RGE_RS04065 PF00005 ABC transporter RGE_RS04070 PF02405 RGE_RS04070 RGE_RS04075 PF02470 RGE_RS04075 RGE_RS04080 PF04333 RGE_RS04080 RGE_RS04085 PF05494 Toluene tolerance, Ttg2 RGE_RS04090 PF13466 STAS domain RGE_RS04095 PF01380 SIS domain RGE_RS04095 PF01418 Helix-turn-helix domain, rpiR family RGE_RS04100 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain RGE_RS04100 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain RGE_RS04105 PF16537 RGE_RS04105 RGE_RS04110 PF13401 AAA domain RGE_RS04115 PF00923 Transaldolase RGE_RS04120 PF00342 Phosphoglucose isomerase RGE_RS04130 PF01965 DJ-1/PfpI family RGE_RS04130 PF12833 Helix-turn-helix domain RGE_RS04135 PF00857 Isochorismatase family RGE_RS04140 PF01546 Peptidase family M20/M25/M40 RGE_RS04140 PF07687 Peptidase dimerisation domain RGE_RS04145 PF00384 Molybdopterin oxidoreductase RGE_RS04145 PF01568 Molydopterin dinucleotide binding domain RGE_RS04145 PF04879 Molybdopterin oxidoreductase Fe4S4 domain RGE_RS04150 PF10023 RGE_RS04150 RGE_RS04155 PF09650 RGE_RS04155 RGE_RS04160 PF00887 Acyl CoA binding protein RGE_RS04165 PF03007 RGE_RS04165 RGE_RS04165 PF06974 RGE_RS04165 RGE_RS04175 PF00440 Bacterial regulatory proteins, tetR family RGE_RS04175 PF13972 Bacterial transcriptional repressor RGE_RS04180 PF00005 ABC transporter RGE_RS04185 PF01061 RGE_RS04185 RGE_RS04190 PF00574 Clp protease RGE_RS04195 PF01722 BolA-like protein RGE_RS04200 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) RGE_RS04205 PF01634 ATP phosphoribosyltransferase RGE_RS04210 PF00815 Histidinol dehydrogenase RGE_RS04215 PF00155 Aminotransferase class I and II RGE_RS04220 PF00475 Imidazoleglycerol-phosphate dehydratase RGE_RS04225 PF00117 Glutamine amidotransferase class-I RGE_RS04230 PF00977 Histidine biosynthesis protein RGE_RS04235 PF00977 Histidine biosynthesis protein RGE_RS04240 PF03602 Conserved hypothetical protein 95 RGE_RS04245 PF01467 Cytidylyltransferase RGE_RS04250 PF12838 4Fe-4S dicluster domain RGE_RS04260 PF01195 Peptidyl-tRNA hydrolase RGE_RS04265 PF01386 Ribosomal L25p family RGE_RS04265 PF14693 Ribosomal protein TL5, C-terminal domain RGE_RS04270 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase RGE_RS04270 PF14572 Phosphoribosyl synthetase-associated domain RGE_RS04280 PF00288 GHMP kinases N terminal domain RGE_RS04285 PF03550 Outer membrane lipoprotein LolB RGE_RS04290 PF13429 Tetratricopeptide repeat RGE_RS04290 PF13432 Tetratricopeptide repeat RGE_RS04295 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain RGE_RS04295 PF06827 Zinc finger found in FPG and IleRS RGE_RS04295 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain RGE_RS04300 PF00350 Dynamin family RGE_RS04305 PF00633 Helix-hairpin-helix motif RGE_RS04305 PF00730 HhH-GPD superfamily base excision DNA repair protein RGE_RS04305 PF14815 NUDIX domain RGE_RS04310 PF02190 ATP-dependent protease La (LON) domain RGE_RS04315 PF03668 RGE_RS04315 RGE_RS04320 PF02463 RecF/RecN/SMC N terminal domain RGE_RS04325 PF01513 ATP-NAD kinase RGE_RS04330 PF01628 HrcA protein C terminal domain RGE_RS04330 PF03444 Winged helix-turn-helix transcription repressor, HrcA DNA-binding RGE_RS04335 PF00072 Response regulator receiver domain RGE_RS04335 PF00497 Bacterial extracellular solute-binding proteins, family 3 RGE_RS04335 PF00512 His Kinase A (phospho-acceptor) domain RGE_RS04335 PF01627 Hpt domain RGE_RS04335 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RGE_RS04335 PF08448 PAS fold RGE_RS04335 PF13188 PAS domain RGE_RS04345 PF12643 RGE_RS04345 RGE_RS04350 PF09848 Uncharacterized conserved protein (DUF2075) RGE_RS04360 PF00696 Amino acid kinase family RGE_RS04365 PF07690 Major Facilitator Superfamily RGE_RS04370 PF07690 Major Facilitator Superfamily RGE_RS04375 PF00549 CoA-ligase RGE_RS04375 PF02629 CoA binding domain RGE_RS04380 PF06545 Protein of unknown function (DUF1116) RGE_RS04385 PF11392 RGE_RS04385 RGE_RS04390 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RGE_RS04390 PF03466 LysR substrate binding domain RGE_RS04395 PF13302 Acetyltransferase (GNAT) domain RGE_RS04400 PF04828 Glutathione-dependent formaldehyde-activating enzyme RGE_RS04405 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RGE_RS04405 PF03466 LysR substrate binding domain RGE_RS04410 PF00753 Metallo-beta-lactamase superfamily RGE_RS04420 PF00072 Response regulator receiver domain RGE_RS04420 PF04397 LytTr DNA-binding domain RGE_RS04425 PF06580 RGE_RS04425 RGE_RS04430 PF02321 Outer membrane efflux protein RGE_RS04435 PF00873 AcrB/AcrD/AcrF family RGE_RS04440 PF16576 RGE_RS04440 RGE_RS04445 PF00512 His Kinase A (phospho-acceptor) domain RGE_RS04445 PF00672 HAMP domain RGE_RS04445 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RGE_RS04450 PF00072 Response regulator receiver domain RGE_RS04450 PF00486 Transcriptional regulatory protein, C terminal RGE_RS04455 PF03551 Transcriptional regulator PadR-like family RGE_RS04460 PF12977 Domain of Unknown Function with PDB structure (DUF3861) RGE_RS04465 PF04055 Radical SAM superfamily RGE_RS04465 PF13186 Iron-sulfur cluster-binding domain RGE_RS04470 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain RGE_RS04470 PF00672 HAMP domain RGE_RS04470 PF12729 RGE_RS04470 RGE_RS04480 PF05433 RGE_RS04480 RGE_RS04485 PF14279 RGE_RS04485 RGE_RS04490 PF00440 Bacterial regulatory proteins, tetR family RGE_RS04495 PF00441 Acyl-CoA dehydrogenase, C-terminal domain RGE_RS04495 PF02770 Acyl-CoA dehydrogenase, middle domain RGE_RS04495 PF02771 Acyl-CoA dehydrogenase, N-terminal domain RGE_RS04495 PF12418 RGE_RS04495 RGE_RS04495 PF12806 RGE_RS04495 RGE_RS04500 PF09917 Uncharacterized protein conserved in bacteria (DUF2147) RGE_RS04505 PF00378 Enoyl-CoA hydratase/isomerase family RGE_RS04505 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain RGE_RS04505 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain RGE_RS04510 PF00108 Thiolase, N-terminal domain RGE_RS04510 PF02803 Thiolase, C-terminal domain RGE_RS04515 PF00378 Enoyl-CoA hydratase/isomerase family RGE_RS04520 PF13472 GDSL-like Lipase/Acylhydrolase family RGE_RS04525 PF00106 short chain dehydrogenase RGE_RS04530 PF01169 RGE_RS04530 RGE_RS04535 PF09086 Domain of unknown function (DUF1924) RGE_RS04540 PF09626 Dihaem cytochrome c RGE_RS04545 PF01292 Prokaryotic cytochrome b561 RGE_RS04550 PF00072 Response regulator receiver domain RGE_RS04550 PF00486 Transcriptional regulatory protein, C terminal RGE_RS04555 PF00512 His Kinase A (phospho-acceptor) domain RGE_RS04555 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RGE_RS04555 PF08521 RGE_RS04555 RGE_RS04560 PF03061 Thioesterase superfamily RGE_RS04565 PF00005 ABC transporter RGE_RS04565 PF00664 ABC transporter transmembrane region RGE_RS04570 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RGE_RS04570 PF03466 LysR substrate binding domain RGE_RS04575 PF00497 Bacterial extracellular solute-binding proteins, family 3 RGE_RS04580 PF00528 Binding-protein-dependent transport system inner membrane component RGE_RS04585 PF00528 Binding-protein-dependent transport system inner membrane component RGE_RS04590 PF00005 ABC transporter RGE_RS04595 PF00990 GGDEF domain RGE_RS04600 PF00990 GGDEF domain RGE_RS04605 PF01979 Amidohydrolase family RGE_RS04610 PF01936 NYN domain RGE_RS04615 PF01435 Peptidase family M48 RGE_RS04620 PF00291 Pyridoxal-phosphate dependent enzyme RGE_RS04625 PF07690 Major Facilitator Superfamily RGE_RS04630 PF00194 Eukaryotic-type carbonic anhydrase RGE_RS04640 PF02381 MraZ protein RGE_RS04645 PF01795 MraW methylase family RGE_RS04650 PF04999 RGE_RS04650 RGE_RS04655 PF00905 Penicillin binding protein transpeptidase domain RGE_RS04655 PF03717 Penicillin-binding Protein dimerisation domain RGE_RS04660 PF01225 Mur ligase family, catalytic domain RGE_RS04660 PF02875 Mur ligase family, glutamate ligase domain RGE_RS04660 PF08245 Mur ligase middle domain RGE_RS04665 PF01225 Mur ligase family, catalytic domain RGE_RS04665 PF02875 Mur ligase family, glutamate ligase domain RGE_RS04665 PF08245 Mur ligase middle domain RGE_RS04670 PF00953 Glycosyl transferase family 4 RGE_RS04670 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 RGE_RS04675 PF08245 Mur ligase middle domain RGE_RS04680 PF01098 RGE_RS04680 RGE_RS04685 PF03033 Glycosyltransferase family 28 N-terminal domain RGE_RS04685 PF04101 Glycosyltransferase family 28 C-terminal domain RGE_RS04690 PF01225 Mur ligase family, catalytic domain RGE_RS04690 PF02875 Mur ligase family, glutamate ligase domain RGE_RS04690 PF08245 Mur ligase middle domain RGE_RS04695 PF01820 D-ala D-ala ligase N-terminus RGE_RS04695 PF07478 D-ala D-ala ligase C-terminus RGE_RS04700 PF03799 Cell division protein FtsQ RGE_RS04700 PF08478 POTRA domain, FtsQ-type RGE_RS04705 PF02491 SHS2 domain inserted in FTSA RGE_RS04705 PF14450 Cell division protein FtsA RGE_RS04710 PF00091 Tubulin/FtsZ family, GTPase domain RGE_RS04710 PF12327 FtsZ family, C-terminal domain RGE_RS04715 PF03704 Bacterial transcriptional activator domain RGE_RS04715 PF13191 AAA ATPase domain RGE_RS04720 PF01435 Peptidase family M48 RGE_RS04725 PF01794 RGE_RS04725 RGE_RS04725 PF08022 RGE_RS04725 RGE_RS04730 PF13689 RGE_RS04730 RGE_RS04735 PF00990 GGDEF domain RGE_RS04735 PF17152 RGE_RS04735 RGE_RS04740 PF00691 OmpA family RGE_RS04745 PF02310 B12 binding domain RGE_RS04745 PF04055 Radical SAM superfamily RGE_RS04750 PF03401 Tripartite tricarboxylate transporter family receptor RGE_RS04760 PF00440 Bacterial regulatory proteins, tetR family RGE_RS04765 PF13561 Enoyl-(Acyl carrier protein) reductase RGE_RS04770 PF00072 Response regulator receiver domain RGE_RS04770 PF00512 His Kinase A (phospho-acceptor) domain RGE_RS04770 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RGE_RS04770 PF08448 PAS fold RGE_RS04780 PF01872 RibD C-terminal domain RGE_RS04785 PF04307 RGE_RS04785 RGE_RS04790 PF07237 Protein of unknown function (DUF1428) RGE_RS04795 PF00248 Aldo/keto reductase family RGE_RS04805 PF00682 HMGL-like RGE_RS04805 PF08502 LeuA allosteric (dimerisation) domain RGE_RS04810 PF00440 Bacterial regulatory proteins, tetR family RGE_RS04815 PF13578 Methyltransferase domain RGE_RS04820 PF01909 Nucleotidyltransferase domain RGE_RS04825 PF03009 Glycerophosphoryl diester phosphodiesterase family RGE_RS04840 PF00072 Response regulator receiver domain RGE_RS04840 PF00158 Sigma-54 interaction domain RGE_RS04840 PF02954 Bacterial regulatory protein, Fis family RGE_RS04845 PF00512 His Kinase A (phospho-acceptor) domain RGE_RS04845 PF00672 HAMP domain RGE_RS04845 PF00989 PAS fold RGE_RS04845 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RGE_RS04850 PF01144 Coenzyme A transferase RGE_RS04855 PF01144 Coenzyme A transferase RGE_RS04860 PF02667 RGE_RS04860 RGE_RS04865 PF00108 Thiolase, N-terminal domain RGE_RS04865 PF02803 Thiolase, C-terminal domain RGE_RS04870 PF00871 Acetokinase family RGE_RS04875 PF01515 Phosphate acetyl/butaryl transferase RGE_RS04875 PF07085 DRTGG domain RGE_RS04875 PF13500 AAA domain RGE_RS04880 PF12833 Helix-turn-helix domain RGE_RS04885 PF01243 Pyridoxamine 5'-phosphate oxidase RGE_RS04890 PF00291 Pyridoxal-phosphate dependent enzyme RGE_RS04890 PF01546 Peptidase family M20/M25/M40 RGE_RS04890 PF07687 Peptidase dimerisation domain RGE_RS04895 PF01546 Peptidase family M20/M25/M40 RGE_RS04895 PF07687 Peptidase dimerisation domain RGE_RS04900 PF01037 AsnC family RGE_RS04900 PF13404 AsnC-type helix-turn-helix domain RGE_RS04905 PF01370 NAD dependent epimerase/dehydratase family RGE_RS04910 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RGE_RS04910 PF03466 LysR substrate binding domain RGE_RS04920 PF02253 Phospholipase A1 RGE_RS04925 PF03171 2OG-Fe(II) oxygenase superfamily RGE_RS04925 PF14226 non-haem dioxygenase in morphine synthesis N-terminal RGE_RS04930 PF01979 Amidohydrolase family RGE_RS04935 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain RGE_RS04935 PF00672 HAMP domain RGE_RS04935 PF12729 RGE_RS04935 RGE_RS04940 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase RGE_RS04950 PF01471 Putative peptidoglycan binding domain RGE_RS04950 PF13401 AAA domain RGE_RS04955 PF01738 Dienelactone hydrolase family RGE_RS04960 PF02075 Crossover junction endodeoxyribonuclease RuvC RGE_RS04965 PF04972 BON domain RGE_RS04970 PF00072 Response regulator receiver domain RGE_RS04975 PF00072 Response regulator receiver domain RGE_RS04975 PF00196 Bacterial regulatory proteins, luxR family RGE_RS04985 PF01148 Cytidylyltransferase family RGE_RS04990 PF01553 Acyltransferase RGE_RS04995 PF01808 AICARFT/IMPCHase bienzyme RGE_RS04995 PF02142 MGS-like domain RGE_RS05000 PF02954 Bacterial regulatory protein, Fis family RGE_RS05005 PF01207 Dihydrouridine synthase (Dus) RGE_RS05010 PF09335 RGE_RS05010 RGE_RS05015 PF02074 Carboxypeptidase Taq (M32) metallopeptidase RGE_RS05020 PF01734 Patatin-like phospholipase RGE_RS05025 PF05597 RGE_RS05025 RGE_RS05030 PF01545 Cation efflux family RGE_RS05035 PF00696 Amino acid kinase family RGE_RS05040 PF00892 EamA-like transporter family RGE_RS05045 PF13419 Haloacid dehalogenase-like hydrolase RGE_RS05050 PF00440 Bacterial regulatory proteins, tetR family RGE_RS05055 PF00149 Calcineurin-like phosphoesterase RGE_RS05060 PF05673 Protein of unknown function (DUF815) RGE_RS05065 PF00293 NUDIX domain RGE_RS05070 PF01502 Phosphoribosyl-AMP cyclohydrolase RGE_RS05075 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase RGE_RS05085 PF01230 HIT domain RGE_RS05090 PF02416 mttA/Hcf106 family RGE_RS05095 PF02416 mttA/Hcf106 family RGE_RS05100 PF00902 Sec-independent protein translocase protein (TatC) RGE_RS05105 PF13180 PDZ domain RGE_RS05105 PF13365 Trypsin-like peptidase domain RGE_RS05110 PF01784 NIF3 (NGG1p interacting factor 3) RGE_RS05115 PF04166 Pyridoxal phosphate biosynthetic protein PdxA RGE_RS05120 PF07793 RGE_RS05120 RGE_RS05125 PF01741 Large-conductance mechanosensitive channel, MscL RGE_RS05130 PF00355 Rieske [2Fe-2S] domain RGE_RS05130 PF10399 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal RGE_RS05135 PF00032 Cytochrome b(C-terminal)/b6/petD RGE_RS05135 PF00033 Cytochrome b(N-terminal)/b6/petB RGE_RS05140 PF02167 Cytochrome C1 family RGE_RS05145 PF13410 Glutathione S-transferase, C-terminal domain RGE_RS05145 PF13417 Glutathione S-transferase, N-terminal domain RGE_RS05150 PF04386 Stringent starvation protein B RGE_RS05165 PF01043 SecA preprotein cross-linking domain RGE_RS05165 PF02810 SEC-C motif RGE_RS05165 PF07516 SecA Wing and Scaffold domain RGE_RS05165 PF07517 SecA DEAD-like domain RGE_RS05170 PF00082 Subtilase family RGE_RS05170 PF02225 PA domain RGE_RS05170 PF06280 Fn3-like domain (DUF1034) RGE_RS05175 PF01960 ArgJ family RGE_RS05180 PF05977 Transmembrane secretion effector RGE_RS05185 PF03009 Glycerophosphoryl diester phosphodiesterase family RGE_RS05190 PF00005 ABC transporter RGE_RS05190 PF08402 TOBE domain RGE_RS05195 PF00528 Binding-protein-dependent transport system inner membrane component RGE_RS05200 PF00528 Binding-protein-dependent transport system inner membrane component RGE_RS05205 PF13416 Bacterial extracellular solute-binding protein RGE_RS05210 PF01565 FAD binding domain RGE_RS05210 PF02754 RGE_RS05210 RGE_RS05210 PF02913 FAD linked oxidases, C-terminal domain RGE_RS05210 PF11880 RGE_RS05210 RGE_RS05210 PF12447 RGE_RS05210 RGE_RS05210 PF13183 4Fe-4S dicluster domain RGE_RS05220 PF06155 Protein of unknown function (DUF971) RGE_RS05225 PF01209 ubiE/COQ5 methyltransferase family RGE_RS05235 PF13145 PPIC-type PPIASE domain RGE_RS05235 PF13624 SurA N-terminal domain RGE_RS05240 PF02563 Polysaccharide biosynthesis/export protein RGE_RS05240 PF10531 SLBB domain RGE_RS05245 PF02706 Chain length determinant protein RGE_RS05245 PF13807 RGE_RS05245 RGE_RS05250 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain RGE_RS05255 PF09721 RGE_RS05255 RGE_RS05260 PF11984 RGE_RS05260 RGE_RS05265 PF13440 RGE_RS05265 RGE_RS05270 PF04230 RGE_RS05270 RGE_RS05275 PF13692 Glycosyl transferases group 1 RGE_RS05280 PF01229 Glycosyl hydrolases family 39 RGE_RS05290 PF13692 Glycosyl transferases group 1 RGE_RS05295 PF13439 Glycosyltransferase Family 4 RGE_RS05295 PF13692 Glycosyl transferases group 1 RGE_RS05300 PF02018 Carbohydrate binding domain RGE_RS05300 PF11790 RGE_RS05300 RGE_RS05305 PF03808 RGE_RS05305 RGE_RS05310 PF13439 Glycosyltransferase Family 4 RGE_RS05310 PF13692 Glycosyl transferases group 1 RGE_RS05315 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain RGE_RS05315 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain RGE_RS05315 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain RGE_RS05320 PF00483 Nucleotidyl transferase RGE_RS05320 PF01050 Mannose-6-phosphate isomerase RGE_RS05325 PF16363 RGE_RS05325 RGE_RS05335 PF02397 RGE_RS05335 RGE_RS05335 PF13727 CoA-binding domain RGE_RS05345 PF03109 RGE_RS05345 RGE_RS05350 PF09723 RGE_RS05350 RGE_RS05355 PF04367 RGE_RS05355 RGE_RS05360 PF00152 tRNA synthetases class II (D, K and N) RGE_RS05360 PF01336 OB-fold nucleic acid binding domain RGE_RS05360 PF02938 GAD domain RGE_RS05365 PF13449 Esterase-like activity of phytase RGE_RS05370 PF00793 DAHP synthetase I family RGE_RS05375 PF00293 NUDIX domain RGE_RS05380 PF03372 Endonuclease/Exonuclease/phosphatase family RGE_RS05385 PF13091 PLD-like domain RGE_RS05390 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle RGE_RS05395 PF00528 Binding-protein-dependent transport system inner membrane component RGE_RS05400 PF00528 Binding-protein-dependent transport system inner membrane component RGE_RS05400 PF12911 RGE_RS05400 RGE_RS05405 PF00005 ABC transporter RGE_RS05405 PF08352 Oligopeptide/dipeptide transporter, C-terminal region RGE_RS05410 PF00005 ABC transporter RGE_RS05410 PF08352 Oligopeptide/dipeptide transporter, C-terminal region RGE_RS05415 PF05656 RGE_RS05415 RGE_RS05425 PF13302 Acetyltransferase (GNAT) domain RGE_RS05425 PF13380 CoA binding domain RGE_RS05425 PF13549 ATP-grasp domain RGE_RS05425 PF13607 Succinyl-CoA ligase like flavodoxin domain RGE_RS05430 PF00582 Universal stress protein family RGE_RS05435 PF01068 ATP dependent DNA ligase domain RGE_RS05435 PF04675 DNA ligase N terminus RGE_RS05435 PF04679 ATP dependent DNA ligase C terminal region RGE_RS05440 PF02627 Carboxymuconolactone decarboxylase family RGE_RS05445 PF04052 TolB amino-terminal domain RGE_RS05445 PF07676 WD40-like Beta Propeller Repeat RGE_RS05450 PF00691 OmpA family RGE_RS05455 PF13525 Outer membrane lipoprotein RGE_RS05455 PF16331 RGE_RS05455 RGE_RS05460 PF00899 ThiF family RGE_RS05485 PF00370 FGGY family of carbohydrate kinases, N-terminal domain RGE_RS05485 PF02782 FGGY family of carbohydrate kinases, C-terminal domain RGE_RS05490 PF00596 Class II Aldolase and Adducin N-terminal domain RGE_RS05495 PF00202 Aminotransferase class-III RGE_RS05505 PF01168 Alanine racemase, N-terminal domain RGE_RS05510 PF01565 FAD binding domain RGE_RS05510 PF04030 D-arabinono-1,4-lactone oxidase RGE_RS05515 PF13442 Cytochrome C oxidase, cbb3-type, subunit III RGE_RS05520 PF03176 MMPL family RGE_RS05530 PF07044 Protein of unknown function (DUF1329) RGE_RS05535 PF06980 RGE_RS05535 RGE_RS05540 PF07859 alpha/beta hydrolase fold RGE_RS05550 PF00440 Bacterial regulatory proteins, tetR family RGE_RS05555 PF00056 lactate/malate dehydrogenase, NAD binding domain RGE_RS05555 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain RGE_RS05560 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RGE_RS05560 PF03466 LysR substrate binding domain RGE_RS05565 PF00202 Aminotransferase class-III RGE_RS05575 PF02583 Metal-sensitive transcriptional repressor RGE_RS05580 PF00107 Zinc-binding dehydrogenase RGE_RS05580 PF08240 Alcohol dehydrogenase GroES-like domain RGE_RS05585 PF00756 Putative esterase RGE_RS05595 PF00009 Elongation factor Tu GTP binding domain RGE_RS05595 PF03144 Elongation factor Tu domain 2 RGE_RS05595 PF09106 Elongation factor SelB, winged helix RGE_RS05595 PF09107 Elongation factor SelB, winged helix RGE_RS05600 PF03841 L-seryl-tRNA selenium transferase RGE_RS05600 PF12390 RGE_RS05600 RGE_RS05605 PF04216 Protein involved in formate dehydrogenase formation RGE_RS05610 PF01292 Prokaryotic cytochrome b561 RGE_RS05615 PF09163 Formate dehydrogenase N, transmembrane RGE_RS05615 PF13247 4Fe-4S dicluster domain RGE_RS05620 PF00384 Molybdopterin oxidoreductase RGE_RS05620 PF01568 Molydopterin dinucleotide binding domain RGE_RS05625 PF00384 Molybdopterin oxidoreductase RGE_RS05625 PF04879 Molybdopterin oxidoreductase Fe4S4 domain RGE_RS05630 PF02634 FdhD/NarQ family RGE_RS05635 PF00565 Staphylococcal nuclease homologue RGE_RS05640 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain RGE_RS05640 PF00672 HAMP domain RGE_RS05645 PF08240 Alcohol dehydrogenase GroES-like domain RGE_RS05645 PF13602 Zinc-binding dehydrogenase RGE_RS05650 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RGE_RS05650 PF03466 LysR substrate binding domain RGE_RS05655 PF02574 Homocysteine S-methyltransferase RGE_RS05660 PF00893 Small Multidrug Resistance protein RGE_RS05665 PF04304 RGE_RS05665 RGE_RS05675 PF04277 RGE_RS05675 RGE_RS05680 PF03977 RGE_RS05680 RGE_RS05685 PF00364 Biotin-requiring enzyme RGE_RS05690 PF01039 Carboxyl transferase domain RGE_RS05695 PF02129 X-Pro dipeptidyl-peptidase (S15 family) RGE_RS05695 PF08530 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain RGE_RS05705 PF00581 Rhodanese-like domain RGE_RS05710 PF11614 IG-like fold at C-terminal of FixG, putative oxidoreductase RGE_RS05710 PF12801 RGE_RS05710 RGE_RS05710 PF13746 4Fe-4S dicluster domain RGE_RS05715 PF00593 TonB dependent receptor RGE_RS05715 PF07715 TonB-dependent Receptor Plug Domain RGE_RS05725 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RGE_RS05725 PF03466 LysR substrate binding domain RGE_RS05730 PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain RGE_RS05730 PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain RGE_RS05735 PF00111 2Fe-2S iron-sulfur cluster binding domain RGE_RS05735 PF00175 Oxidoreductase NAD-binding domain RGE_RS05740 PF00082 Subtilase family RGE_RS05745 PF07589 RGE_RS05745 RGE_RS05750 PF00816 H-NS histone family RGE_RS05755 PF00266 Aminotransferase class-V RGE_RS05765 PF03960 ArsC family RGE_RS05770 PF08713 DNA alkylation repair enzyme RGE_RS05775 PF00677 Lumazine binding domain RGE_RS05780 PF00764 Arginosuccinate synthase RGE_RS05790 PF13442 Cytochrome C oxidase, cbb3-type, subunit III RGE_RS05795 PF07995 Glucose / Sorbosone dehydrogenase RGE_RS05800 PF00158 Sigma-54 interaction domain RGE_RS05800 PF01590 GAF domain RGE_RS05800 PF02954 Bacterial regulatory protein, Fis family RGE_RS05810 PF00266 Aminotransferase class-V RGE_RS05815 PF00582 Universal stress protein family RGE_RS05820 PF00589 Phage integrase family RGE_RS05820 PF13495 Phage integrase, N-terminal SAM-like domain RGE_RS05835 PF01548 RGE_RS05835 RGE_RS05835 PF02371 RGE_RS05835 RGE_RS05845 PF01553 Acyltransferase RGE_RS05850 PF13847 Methyltransferase domain RGE_RS05855 PF03473 MOSC domain RGE_RS05860 PF07853 RGE_RS05860 RGE_RS05865 PF02308 RGE_RS05865 RGE_RS05870 PF13520 Amino acid permease RGE_RS05875 PF00593 TonB dependent receptor RGE_RS05875 PF07715 TonB-dependent Receptor Plug Domain RGE_RS05885 PF01988 RGE_RS05885 RGE_RS05890 PF00563 EAL domain RGE_RS05895 PF04940 Sensors of blue-light using FAD RGE_RS05905 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily RGE_RS05915 PF02585 GlcNAc-PI de-N-acetylase RGE_RS05920 PF00535 Glycosyl transferase family 2 RGE_RS05925 PF00043 Glutathione S-transferase, C-terminal domain RGE_RS05925 PF13417 Glutathione S-transferase, N-terminal domain RGE_RS05940 PF00929 Exonuclease RGE_RS05940 PF08411 Exonuclease C-terminal RGE_RS05945 PF00135 Carboxylesterase family RGE_RS05950 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RGE_RS05950 PF03466 LysR substrate binding domain RGE_RS05960 PF01063 Aminotransferase class IV RGE_RS05970 PF00905 Penicillin binding protein transpeptidase domain RGE_RS05970 PF00912 Transglycosylase RGE_RS05970 PF17092 RGE_RS05970 RGE_RS05975 PF00330 Aconitase family (aconitate hydratase) RGE_RS05975 PF06434 Aconitate hydratase 2 N-terminus RGE_RS05975 PF11791 Aconitate B N-terminal domain RGE_RS05980 PF03328 HpcH/HpaI aldolase/citrate lyase family RGE_RS05985 PF00056 lactate/malate dehydrogenase, NAD binding domain RGE_RS05985 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain RGE_RS05990 PF00392 Bacterial regulatory proteins, gntR family RGE_RS05990 PF07702 UTRA domain RGE_RS05995 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit RGE_RS06000 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit RGE_RS06005 PF00890 FAD binding domain RGE_RS06005 PF02910 Fumarate reductase flavoprotein C-term RGE_RS06010 PF13085 2Fe-2S iron-sulfur cluster binding domain RGE_RS06010 PF13237 4Fe-4S dicluster domain RGE_RS06015 PF03937 Flavinator of succinate dehydrogenase RGE_RS06020 PF00285 Citrate synthase RGE_RS06025 PF08668 HDOD domain RGE_RS06030 PF00549 CoA-ligase RGE_RS06030 PF02629 CoA binding domain RGE_RS06035 PF00549 CoA-ligase RGE_RS06035 PF08442 ATP-grasp domain RGE_RS06040 PF00392 Bacterial regulatory proteins, gntR family RGE_RS06040 PF07729 FCD domain RGE_RS06045 PF01584 CheW-like domain RGE_RS06045 PF02743 Cache domain RGE_RS06050 PF01642 Methylmalonyl-CoA mutase RGE_RS06050 PF02310 B12 binding domain RGE_RS06055 PF03308 ArgK protein RGE_RS06060 PF01039 Carboxyl transferase domain RGE_RS06065 PF00289 Carbamoyl-phosphate synthase L chain, N-terminal domain RGE_RS06065 PF00364 Biotin-requiring enzyme RGE_RS06065 PF02785 Biotin carboxylase C-terminal domain RGE_RS06065 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain RGE_RS06070 PF04055 Radical SAM superfamily RGE_RS06070 PF06968 Biotin and Thiamin Synthesis associated domain RGE_RS06075 PF13669 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily RGE_RS06080 PF04338 Protein of unknown function, DUF481 RGE_RS06085 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RGE_RS06085 PF03466 LysR substrate binding domain RGE_RS06090 PF00330 Aconitase family (aconitate hydratase) RGE_RS06095 PF08085 RGE_RS06095 RGE_RS06100 PF00694 Aconitase C-terminal domain RGE_RS06105 PF00180 Isocitrate/isopropylmalate dehydrogenase RGE_RS06110 PF01118 Semialdehyde dehydrogenase, NAD binding domain RGE_RS06110 PF02774 Semialdehyde dehydrogenase, dimerisation domain RGE_RS06120 PF01416 tRNA pseudouridine synthase RGE_RS06125 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase RGE_RS06130 PF00291 Pyridoxal-phosphate dependent enzyme RGE_RS06135 PF00290 Tryptophan synthase alpha chain RGE_RS06140 PF01039 Carboxyl transferase domain RGE_RS06145 PF08245 Mur ligase middle domain RGE_RS06150 PF05036 Sporulation related domain RGE_RS06155 PF02674 RGE_RS06155 RGE_RS06160 PF00156 Phosphoribosyl transferase domain RGE_RS06160 PF13522 Glutamine amidotransferase domain RGE_RS06165 PF01053 Cys/Met metabolism PLP-dependent enzyme RGE_RS06170 PF00749 tRNA synthetases class I (E and Q), catalytic domain RGE_RS06190 PF00440 Bacterial regulatory proteins, tetR family RGE_RS06210 PF08837 Protein of unknown function (DUF1810) RGE_RS06215 PF00005 ABC transporter RGE_RS06215 PF00664 ABC transporter transmembrane region RGE_RS06220 PF11684 RGE_RS06220 RGE_RS06230 PF01904 Protein of unknown function DUF72 RGE_RS06235 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily RGE_RS06245 PF01904 Protein of unknown function DUF72 RGE_RS06250 PF11278 RGE_RS06250 RGE_RS06255 PF00440 Bacterial regulatory proteins, tetR family RGE_RS06255 PF14246 AefR-like transcriptional repressor, C-terminal region RGE_RS06260 PF07642 RGE_RS06260 RGE_RS06270 PF07110 EthD domain RGE_RS06275 PF02146 Sir2 family RGE_RS06280 PF09864 Membrane-bound lysozyme-inhibitor of c-type lysozyme RGE_RS06285 PF04463 RGE_RS06285 RGE_RS06290 PF00583 Acetyltransferase (GNAT) family RGE_RS06290 PF13302 Acetyltransferase (GNAT) domain RGE_RS06300 PF00583 Acetyltransferase (GNAT) family RGE_RS06305 PF00850 Histone deacetylase domain RGE_RS06310 PF00293 NUDIX domain RGE_RS06320 PF13489 Methyltransferase domain RGE_RS06325 PF09900 RGE_RS06325 RGE_RS06335 PF00293 NUDIX domain RGE_RS06340 PF08327 Activator of Hsp90 ATPase homolog 1-like protein RGE_RS06345 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily RGE_RS06350 PF13302 Acetyltransferase (GNAT) domain RGE_RS06355 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily RGE_RS06365 PF13671 AAA domain RGE_RS06370 PF00583 Acetyltransferase (GNAT) family RGE_RS06370 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily RGE_RS06375 PF13302 Acetyltransferase (GNAT) domain RGE_RS06380 PF02694 RGE_RS06380 RGE_RS06390 PF00583 Acetyltransferase (GNAT) family RGE_RS06395 PF13417 Glutathione S-transferase, N-terminal domain RGE_RS06400 PF13302 Acetyltransferase (GNAT) domain RGE_RS06405 PF00497 Bacterial extracellular solute-binding proteins, family 3 RGE_RS06410 PF00528 Binding-protein-dependent transport system inner membrane component RGE_RS06415 PF00528 Binding-protein-dependent transport system inner membrane component RGE_RS06420 PF02673 RGE_RS06420 RGE_RS06425 PF11026 RGE_RS06425 RGE_RS06435 PF01336 OB-fold nucleic acid binding domain RGE_RS06435 PF02811 PHP domain RGE_RS06435 PF07733 Bacterial DNA polymerase III alpha subunit RGE_RS06435 PF14579 Helix-hairpin-helix motif RGE_RS06440 PF02230 Phospholipase/Carboxylesterase RGE_RS06445 PF03883 RGE_RS06445 RGE_RS06455 PF13640 2OG-Fe(II) oxygenase superfamily RGE_RS06460 PF02308 RGE_RS06460 RGE_RS06460 PF13194 RGE_RS06460 RGE_RS06465 PF00753 Metallo-beta-lactamase superfamily RGE_RS06465 PF07521 RNA-metabolising metallo-beta-lactamase RGE_RS06465 PF10996 Beta-Casp domain RGE_RS06470 PF13460 NADH(P)-binding RGE_RS06475 PF00557 Metallopeptidase family M24 RGE_RS06475 PF01321 Creatinase/Prolidase N-terminal domain RGE_RS06475 PF16188 RGE_RS06475 RGE_RS06475 PF16189 RGE_RS06475 RGE_RS06485 PF00266 Aminotransferase class-V RGE_RS06490 PF04199 Putative cyclase RGE_RS06495 PF03692 RGE_RS06495 RGE_RS06500 PF00069 Protein kinase domain RGE_RS06500 PF00582 Universal stress protein family RGE_RS06505 PF12850 Calcineurin-like phosphoesterase superfamily domain RGE_RS06510 PF01557 Fumarylacetoacetate (FAA) hydrolase family RGE_RS06515 PF01872 RibD C-terminal domain RGE_RS06520 PF00106 short chain dehydrogenase RGE_RS06530 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein RGE_RS06535 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain RGE_RS06535 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain RGE_RS06540 PF00202 Aminotransferase class-III RGE_RS06545 PF12112 Protein of unknown function (DUF3579) RGE_RS06550 PF01649 Ribosomal protein S20 RGE_RS06555 PF03023 RGE_RS06555 RGE_RS06560 PF13369 RGE_RS06560 RGE_RS06560 PF13371 Tetratricopeptide repeat RGE_RS06565 PF13191 AAA ATPase domain RGE_RS06570 PF12710 haloacid dehalogenase-like hydrolase RGE_RS06575 PF01743 Poly A polymerase head domain RGE_RS06575 PF12626 Polymerase A arginine-rich C-terminus RGE_RS06575 PF12627 Probable RNA and SrmB- binding site of polymerase A RGE_RS06580 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) RGE_RS06585 PF04342 RGE_RS06585 RGE_RS06590 PF01865 Protein of unknown function DUF47 RGE_RS06595 PF01384 RGE_RS06595 RGE_RS06600 PF05154 RGE_RS06600 RGE_RS06605 PF13420 Acetyltransferase (GNAT) domain RGE_RS06610 PF00886 Ribosomal protein S16 RGE_RS06615 PF01782 RimM N-terminal domain RGE_RS06620 PF01746 tRNA (Guanine-1)-methyltransferase RGE_RS06625 PF01245 Ribosomal protein L19 RGE_RS06630 PF00293 NUDIX domain RGE_RS06635 PF03186 RGE_RS06635 RGE_RS06640 PF03193 Protein of unknown function, DUF258 RGE_RS06645 PF01435 Peptidase family M48 RGE_RS06645 PF16491 RGE_RS06645 RGE_RS06650 PF00929 Exonuclease RGE_RS06655 PF06445 GyrI-like small molecule binding domain RGE_RS06655 PF12833 Helix-turn-helix domain RGE_RS06660 PF12146 Putative lysophospholipase RGE_RS06665 PF00270 DEAD/DEAH box helicase RGE_RS06665 PF00271 Helicase conserved C-terminal domain RGE_RS06670 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase RGE_RS06675 PF00749 tRNA synthetases class I (E and Q), catalytic domain RGE_RS06680 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RGE_RS06680 PF03466 LysR substrate binding domain RGE_RS06685 PF02678 Pirin RGE_RS06690 PF04654 RGE_RS06690 RGE_RS06695 PF01546 Peptidase family M20/M25/M40 RGE_RS06695 PF07687 Peptidase dimerisation domain RGE_RS06700 PF00291 Pyridoxal-phosphate dependent enzyme RGE_RS06705 PF00561 alpha/beta hydrolase fold RGE_RS06710 PF01336 OB-fold nucleic acid binding domain RGE_RS06710 PF02811 PHP domain RGE_RS06710 PF07733 Bacterial DNA polymerase III alpha subunit RGE_RS06710 PF14579 Helix-hairpin-helix motif RGE_RS06725 PF12836 Helix-hairpin-helix motif RGE_RS06730 PF13580 SIS domain RGE_RS06735 PF00294 pfkB family carbohydrate kinase RGE_RS06740 PF01467 Cytidylyltransferase RGE_RS06745 PF13242 HAD-hyrolase-like RGE_RS06755 PF01075 Glycosyltransferase family 9 (heptosyltransferase) RGE_RS06765 PF04991 RGE_RS06765 RGE_RS06770 PF04464 CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase RGE_RS06775 PF00534 Glycosyl transferases group 1 RGE_RS06775 PF13439 Glycosyltransferase Family 4 RGE_RS06780 PF01075 Glycosyltransferase family 9 (heptosyltransferase) RGE_RS06785 PF00005 ABC transporter RGE_RS06785 PF00664 ABC transporter transmembrane region RGE_RS06795 PF06305 RGE_RS06795 RGE_RS06800 PF00216 Bacterial DNA-binding protein RGE_RS06805 PF00575 S1 RNA binding domain RGE_RS06810 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) RGE_RS06810 PF02224 Cytidylate kinase RGE_RS06815 PF02153 Prephenate dehydrogenase RGE_RS06820 PF00800 Prephenate dehydratase RGE_RS06820 PF01817 Chorismate mutase type II RGE_RS06820 PF01842 ACT domain RGE_RS06830 PF00521 DNA gyrase/topoisomerase IV, subunit A RGE_RS06830 PF03989 DNA gyrase C-terminal domain, beta-propeller RGE_RS06835 PF00691 OmpA family RGE_RS06840 PF13489 Methyltransferase domain RGE_RS06845 PF13419 Haloacid dehalogenase-like hydrolase RGE_RS06850 PF00892 EamA-like transporter family RGE_RS06855 PF09413 Domain of unknown function (DUF2007) RGE_RS06860 PF00107 Zinc-binding dehydrogenase RGE_RS06860 PF08240 Alcohol dehydrogenase GroES-like domain RGE_RS06865 PF09955 RGE_RS06865 RGE_RS06870 PF01252 RGE_RS06870 RGE_RS06875 PF00072 Response regulator receiver domain RGE_RS06875 PF00512 His Kinase A (phospho-acceptor) domain RGE_RS06875 PF01627 Hpt domain RGE_RS06875 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RGE_RS06875 PF08448 PAS fold RGE_RS06880 PF00133 tRNA synthetases class I (I, L, M and V) RGE_RS06880 PF08264 Anticodon-binding domain of tRNA RGE_RS06885 PF06629 RGE_RS06885 RGE_RS06890 PF01687 Riboflavin kinase RGE_RS06890 PF06574 FAD synthetase RGE_RS06895 PF00849 RNA pseudouridylate synthase RGE_RS06895 PF01479 S4 domain RGE_RS06900 PF03576 Peptidase family S58 RGE_RS06905 PF00441 Acyl-CoA dehydrogenase, C-terminal domain RGE_RS06905 PF02770 Acyl-CoA dehydrogenase, middle domain RGE_RS06905 PF02771 Acyl-CoA dehydrogenase, N-terminal domain RGE_RS06910 PF00441 Acyl-CoA dehydrogenase, C-terminal domain RGE_RS06910 PF02770 Acyl-CoA dehydrogenase, middle domain RGE_RS06910 PF02771 Acyl-CoA dehydrogenase, N-terminal domain RGE_RS06915 PF13975 RGE_RS06915 RGE_RS06920 PF04461 Protein of unknown function (DUF520) RGE_RS06925 PF01565 FAD binding domain RGE_RS06925 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain RGE_RS06930 PF02535 RGE_RS06930 RGE_RS06940 PF00072 Response regulator receiver domain RGE_RS06940 PF00512 His Kinase A (phospho-acceptor) domain RGE_RS06940 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RGE_RS06950 PF04422 Coenzyme F420 hydrogenase/dehydrogenase, beta subunit N-term RGE_RS06950 PF04432 Coenzyme F420 hydrogenase/dehydrogenase, beta subunit C terminus RGE_RS06955 PF13432 Tetratricopeptide repeat RGE_RS06955 PF14559 Tetratricopeptide repeat RGE_RS06965 PF10014 2OG-Fe dioxygenase RGE_RS06970 PF00450 Serine carboxypeptidase RGE_RS06975 PF00365 Phosphofructokinase RGE_RS06980 PF06172 Cupin superfamily (DUF985) RGE_RS06985 PF00106 short chain dehydrogenase RGE_RS06995 PF01613 Flavin reductase like domain RGE_RS07000 PF00849 RNA pseudouridylate synthase RGE_RS07005 PF03193 Protein of unknown function, DUF258 RGE_RS07010 PF07819 PGAP1-like protein RGE_RS07015 PF05977 Transmembrane secretion effector RGE_RS07025 PF01220 Dehydroquinase class II RGE_RS07030 PF04262 Glutamate-cysteine ligase RGE_RS07035 PF02537 RGE_RS07035 RGE_RS07040 PF01987 Mitochondrial biogenesis AIM24 RGE_RS07045 PF07264 Etoposide-induced protein 2 RGE_RS07050 PF00994 Probable molybdopterin binding domain RGE_RS07055 PF00120 Glutamine synthetase, catalytic domain RGE_RS07055 PF03951 Glutamine synthetase, beta-Grasp domain RGE_RS07065 PF00512 His Kinase A (phospho-acceptor) domain RGE_RS07065 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RGE_RS07070 PF00072 Response regulator receiver domain RGE_RS07070 PF00158 Sigma-54 interaction domain RGE_RS07070 PF02954 Bacterial regulatory protein, Fis family RGE_RS07080 PF01053 Cys/Met metabolism PLP-dependent enzyme RGE_RS07085 PF14903 RGE_RS07085 RGE_RS07100 PF03372 Endonuclease/Exonuclease/phosphatase family RGE_RS07105 PF00186 Dihydrofolate reductase RGE_RS07110 PF00303 Thymidylate synthase RGE_RS07115 PF00072 Response regulator receiver domain RGE_RS07115 PF00512 His Kinase A (phospho-acceptor) domain RGE_RS07115 PF01627 Hpt domain RGE_RS07115 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RGE_RS07115 PF08448 PAS fold RGE_RS07120 PF00072 Response regulator receiver domain RGE_RS07120 PF01966 HD domain RGE_RS07125 PF00005 ABC transporter RGE_RS07125 PF00664 ABC transporter transmembrane region RGE_RS07130 PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain RGE_RS07135 PF00990 GGDEF domain RGE_RS07140 PF07143 Hydroxyneurosporene synthase (CrtC) RGE_RS07140 PF17186 RGE_RS07140 RGE_RS07145 PF02687 RGE_RS07145 RGE_RS07150 PF00005 ABC transporter RGE_RS07155 PF01715 IPP transferase RGE_RS07160 PF07690 Major Facilitator Superfamily RGE_RS07165 PF00849 RNA pseudouridylate synthase RGE_RS07165 PF01479 S4 domain RGE_RS07170 PF00571 CBS domain RGE_RS07175 PF00326 Prolyl oligopeptidase family RGE_RS07180 PF12146 Putative lysophospholipase RGE_RS07185 PF00672 HAMP domain RGE_RS07185 PF07228 Stage II sporulation protein E (SpoIIE) RGE_RS07195 PF09345 RGE_RS07195 RGE_RS07200 PF00990 GGDEF domain RGE_RS07205 PF00392 Bacterial regulatory proteins, gntR family RGE_RS07205 PF07729 FCD domain RGE_RS07210 PF02447 RGE_RS07210 RGE_RS07215 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase RGE_RS07215 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase RGE_RS07220 PF07005 Protein of unknown function, DUF1537 RGE_RS07220 PF17042 RGE_RS07220 RGE_RS07225 PF00596 Class II Aldolase and Adducin N-terminal domain RGE_RS07230 PF01261 Xylose isomerase-like TIM barrel RGE_RS07235 PF03009 Glycerophosphoryl diester phosphodiesterase family RGE_RS07240 PF01119 DNA mismatch repair protein, C-terminal domain RGE_RS07240 PF08676 MutL C terminal dimerisation domain RGE_RS07240 PF13589 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RGE_RS07255 PF00072 Response regulator receiver domain RGE_RS07255 PF00512 His Kinase A (phospho-acceptor) domain RGE_RS07255 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RGE_RS07260 PF09335 RGE_RS07260 RGE_RS07265 PF01520 N-acetylmuramoyl-L-alanine amidase RGE_RS07265 PF11741 AMIN domain RGE_RS07270 PF02367 Uncharacterised P-loop hydrolase UPF0079 RGE_RS07275 PF08331 RGE_RS07275 RGE_RS07275 PF13484 RGE_RS07275 RGE_RS07280 PF03547 RGE_RS07280 RGE_RS07285 PF16036 RGE_RS07285 RGE_RS07290 PF03401 Tripartite tricarboxylate transporter family receptor RGE_RS07295 PF00589 Phage integrase family RGE_RS07295 PF02899 Phage integrase, N-terminal SAM-like domain RGE_RS07300 PF01037 AsnC family RGE_RS07300 PF13404 AsnC-type helix-turn-helix domain RGE_RS07305 PF00202 Aminotransferase class-III RGE_RS07310 PF13609 Gram-negative porin RGE_RS07315 PF01914 RGE_RS07315 RGE_RS07320 PF00528 Binding-protein-dependent transport system inner membrane component RGE_RS07325 PF00497 Bacterial extracellular solute-binding proteins, family 3 RGE_RS07330 PF07171 MlrC C-terminus RGE_RS07330 PF07364 Protein of unknown function (DUF1485) RGE_RS07335 PF04305 RGE_RS07335 RGE_RS07340 PF00132 Bacterial transferase hexapeptide (six repeats) RGE_RS07345 PF01430 Hsp33 protein RGE_RS07350 PF13521 AAA domain RGE_RS07355 PF04973 RGE_RS07355 RGE_RS07360 PF04977 Septum formation initiator RGE_RS07365 PF00113 Enolase, C-terminal TIM barrel domain RGE_RS07365 PF03952 Enolase, N-terminal domain RGE_RS07370 PF07045 Protein of unknown function (DUF1330) RGE_RS07375 PF00793 DAHP synthetase I family RGE_RS07380 PF00117 Glutamine amidotransferase class-I RGE_RS07380 PF06418 CTP synthase N-terminus RGE_RS07385 PF00593 TonB dependent receptor RGE_RS07385 PF07715 TonB-dependent Receptor Plug Domain RGE_RS07390 PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase RGE_RS07395 PF01497 Periplasmic binding protein RGE_RS07400 PF01032 FecCD transport family RGE_RS07405 PF00005 ABC transporter RGE_RS07410 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain RGE_RS07410 PF07685 CobB/CobQ-like glutamine amidotransferase domain RGE_RS07415 PF02277 Phosphoribosyltransferase RGE_RS07420 PF02654 RGE_RS07420 RGE_RS07425 PF00300 Histidine phosphatase superfamily (branch 1) RGE_RS07430 PF03479 Domain of unknown function (DUF296) RGE_RS07435 PF12697 Alpha/beta hydrolase family RGE_RS07445 PF00488 MutS domain V RGE_RS07445 PF01624 MutS domain I RGE_RS07445 PF05188 MutS domain II RGE_RS07445 PF05190 MutS family domain IV RGE_RS07445 PF05192 MutS domain III RGE_RS07450 PF00459 Inositol monophosphatase family RGE_RS07455 PF00588 SpoU rRNA Methylase family RGE_RS07460 PF00132 Bacterial transferase hexapeptide (six repeats) RGE_RS07465 PF00994 Probable molybdopterin binding domain RGE_RS07470 PF04751 Protein of unknown function (DUF615) RGE_RS07475 PF01523 Putative modulator of DNA gyrase RGE_RS07480 PF03480 Bacterial extracellular solute-binding protein, family 7 RGE_RS07485 PF06808 RGE_RS07485 RGE_RS07490 PF04290 RGE_RS07490 RGE_RS07495 PF04273 Putative phosphatase (DUF442) RGE_RS07500 PF09424 Yqey-like protein RGE_RS07505 PF01165 Ribosomal protein S21 RGE_RS07510 PF02885 Glycosyl transferase family, helical bundle domain RGE_RS07515 PF00990 GGDEF domain RGE_RS07515 PF08448 PAS fold RGE_RS07520 PF01925 RGE_RS07520 RGE_RS07525 PF01878 EVE domain RGE_RS07530 PF05164 Cell division protein ZapA RGE_RS07540 PF00633 Helix-hairpin-helix motif RGE_RS07540 PF00730 HhH-GPD superfamily base excision DNA repair protein RGE_RS07545 PF04060 Putative Fe-S cluster RGE_RS07545 PF14697 4Fe-4S dicluster domain RGE_RS07550 PF06850 RGE_RS07550 RGE_RS07555 PF00155 Aminotransferase class I and II RGE_RS07560 PF00271 Helicase conserved C-terminal domain RGE_RS07560 PF02151 UvrB/uvrC motif RGE_RS07560 PF04851 Type III restriction enzyme, res subunit RGE_RS07560 PF12344 Ultra-violet resistance protein B RGE_RS07565 PF01451 Low molecular weight phosphotyrosine protein phosphatase RGE_RS07570 PF02082 Transcriptional regulator RGE_RS07575 PF00266 Aminotransferase class-V RGE_RS07580 PF01592 NifU-like N terminal domain RGE_RS07585 PF01521 Iron-sulphur cluster biosynthesis RGE_RS07590 PF00583 Acetyltransferase (GNAT) family RGE_RS07595 PF07743 HSCB C-terminal oligomerisation domain RGE_RS07600 PF00012 Hsp70 protein RGE_RS07605 PF00111 2Fe-2S iron-sulfur cluster binding domain RGE_RS07610 PF00814 Glycoprotease family RGE_RS07615 PF13458 Periplasmic binding protein RGE_RS07620 PF00155 Aminotransferase class I and II RGE_RS07625 PF00312 Ribosomal protein S15 RGE_RS07630 PF00013 KH domain RGE_RS07630 PF00575 S1 RNA binding domain RGE_RS07630 PF01138 3' exoribonuclease family, domain 1 RGE_RS07630 PF03725 3' exoribonuclease family, domain 2 RGE_RS07630 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain RGE_RS07635 PF00107 Zinc-binding dehydrogenase RGE_RS07640 PF00121 Triosephosphate isomerase RGE_RS07645 PF03840 Preprotein translocase SecG subunit RGE_RS07655 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 RGE_RS07660 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit RGE_RS07665 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit RGE_RS07670 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit RGE_RS07675 PF01257 Thioredoxin-like [2Fe-2S] ferredoxin RGE_RS07680 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit RGE_RS07680 PF10531 SLBB domain RGE_RS07680 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region RGE_RS07685 PF00384 Molybdopterin oxidoreductase RGE_RS07685 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region RGE_RS07685 PF13510 2Fe-2S iron-sulfur cluster binding domain RGE_RS07690 PF00146 NADH dehydrogenase RGE_RS07695 PF12838 4Fe-4S dicluster domain RGE_RS07700 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 RGE_RS07705 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L RGE_RS07710 PF00361 NADH-Ubiquinone/plastoquinone (complex I), various chains RGE_RS07710 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus RGE_RS07715 PF00361 NADH-Ubiquinone/plastoquinone (complex I), various chains RGE_RS07720 PF00361 NADH-Ubiquinone/plastoquinone (complex I), various chains RGE_RS07725 PF00293 NUDIX domain RGE_RS07730 PF06676 RGE_RS07730 RGE_RS07735 PF01565 FAD binding domain RGE_RS07735 PF02913 FAD linked oxidases, C-terminal domain RGE_RS07740 PF09842 RGE_RS07740 RGE_RS07745 PF03631 RGE_RS07745 RGE_RS07750 PF00932 Lamin Tail Domain RGE_RS07750 PF03372 Endonuclease/Exonuclease/phosphatase family RGE_RS07755 PF07589 RGE_RS07755 RGE_RS07760 PF03480 Bacterial extracellular solute-binding protein, family 7 RGE_RS07765 PF06808 RGE_RS07765 RGE_RS07770 PF04290 RGE_RS07770 RGE_RS07775 PF12697 Alpha/beta hydrolase family RGE_RS07780 PF01053 Cys/Met metabolism PLP-dependent enzyme RGE_RS07785 PF00571 CBS domain RGE_RS07790 PF01264 Chorismate synthase RGE_RS07795 PF12832 MFS_1 like family RGE_RS07800 PF00563 EAL domain RGE_RS07800 PF00990 GGDEF domain RGE_RS07800 PF08448 PAS fold RGE_RS07805 PF16576 RGE_RS07805 RGE_RS07810 PF00873 AcrB/AcrD/AcrF family RGE_RS07815 PF00005 ABC transporter RGE_RS07815 PF08402 TOBE domain RGE_RS07820 PF00528 Binding-protein-dependent transport system inner membrane component RGE_RS07825 PF00528 Binding-protein-dependent transport system inner membrane component RGE_RS07830 PF01547 Bacterial extracellular solute-binding protein RGE_RS07835 PF03313 RGE_RS07835 RGE_RS07835 PF03315 Serine dehydratase beta chain RGE_RS07840 PF02347 Glycine cleavage system P-protein RGE_RS07845 PF01597 Glycine cleavage H-protein RGE_RS07850 PF01571 Aminomethyltransferase folate-binding domain RGE_RS07850 PF08669 Glycine cleavage T-protein C-terminal barrel domain RGE_RS07855 PF00501 AMP-binding enzyme RGE_RS07855 PF13193 AMP-binding enzyme C-terminal domain RGE_RS07860 PF00378 Enoyl-CoA hydratase/isomerase family RGE_RS07865 PF00326 Prolyl oligopeptidase family RGE_RS07870 PF05187 Electron transfer flavoprotein-ubiquinone oxidoreductase RGE_RS07870 PF13450 NAD(P)-binding Rossmann-like domain RGE_RS07875 PF01266 FAD dependent oxidoreductase RGE_RS07880 PF13561 Enoyl-(Acyl carrier protein) reductase RGE_RS07885 PF04337 Protein of unknown function, DUF480 RGE_RS07890 PF13279 Thioesterase-like superfamily RGE_RS07900 PF00043 Glutathione S-transferase, C-terminal domain RGE_RS07900 PF02798 Glutathione S-transferase, N-terminal domain RGE_RS07905 PF00196 Bacterial regulatory proteins, luxR family RGE_RS07905 PF13426 PAS domain RGE_RS07910 PF01144 Coenzyme A transferase RGE_RS07920 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 RGE_RS07920 PF00381 PTS HPr component phosphorylation site RGE_RS07920 PF00391 PEP-utilising enzyme, mobile domain RGE_RS07920 PF02896 PEP-utilising enzyme, TIM barrel domain RGE_RS07920 PF05524 PEP-utilising enzyme, N-terminal RGE_RS07925 PF00294 pfkB family carbohydrate kinase RGE_RS07930 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit RGE_RS07935 PF05147 Lanthionine synthetase C-like protein RGE_RS07940 PF01180 Dihydroorotate dehydrogenase RGE_RS07945 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) RGE_RS07955 PF01266 FAD dependent oxidoreductase RGE_RS07955 PF05430 S-adenosyl-L-methionine-dependent methyltransferase RGE_RS07965 PF01132 Elongation factor P (EF-P) OB domain RGE_RS07965 PF08207 Elongation factor P (EF-P) KOW-like domain RGE_RS07965 PF09285 Elongation factor P, C-terminal RGE_RS07970 PF10093 RGE_RS07970 RGE_RS07975 PF01541 GIY-YIG catalytic domain RGE_RS07975 PF02151 UvrB/uvrC motif RGE_RS07975 PF08459 UvrC Helix-hairpin-helix N-terminal RGE_RS07975 PF14520 Helix-hairpin-helix domain RGE_RS07985 PF01066 CDP-alcohol phosphatidyltransferase RGE_RS07990 PF00216 Bacterial DNA-binding protein RGE_RS08000 PF13616 PPIC-type PPIASE domain RGE_RS08000 PF13624 SurA N-terminal domain RGE_RS08010 PF00589 Phage integrase family RGE_RS08020 PF00665 Integrase core domain RGE_RS08025 PF01695 IstB-like ATP binding protein RGE_RS08035 PF13020 RGE_RS08035 RGE_RS08040 PF04851 Type III restriction enzyme, res subunit RGE_RS08050 PF12728 Helix-turn-helix domain RGE_RS08065 PF01381 Helix-turn-helix RGE_RS08070 PF08401 RGE_RS08070 RGE_RS08075 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) RGE_RS08080 PF00440 Bacterial regulatory proteins, tetR family RGE_RS08085 PF16576 RGE_RS08085 RGE_RS08090 PF00873 AcrB/AcrD/AcrF family RGE_RS08095 PF02321 Outer membrane efflux protein RGE_RS08110 PF13505 Outer membrane protein beta-barrel domain RGE_RS08120 PF00072 Response regulator receiver domain RGE_RS08120 PF00486 Transcriptional regulatory protein, C terminal RGE_RS08135 PF01253 Translation initiation factor SUI1 RGE_RS08140 PF11902 RGE_RS08140 RGE_RS08145 PF01078 Magnesium chelatase, subunit ChlI RGE_RS08150 PF13519 von Willebrand factor type A domain RGE_RS08155 PF12697 Alpha/beta hydrolase family RGE_RS08160 PF00501 AMP-binding enzyme RGE_RS08160 PF13193 AMP-binding enzyme C-terminal domain RGE_RS08165 PF02558 Ketopantoate reductase PanE/ApbA RGE_RS08165 PF08546 Ketopantoate reductase PanE/ApbA C terminal RGE_RS08170 PF00582 Universal stress protein family RGE_RS08175 PF00581 Rhodanese-like domain RGE_RS08180 PF00892 EamA-like transporter family RGE_RS08185 PF00355 Rieske [2Fe-2S] domain RGE_RS08185 PF00848 Ring hydroxylating alpha subunit (catalytic domain) RGE_RS08190 PF02609 Exonuclease VII small subunit RGE_RS08195 PF00348 Polyprenyl synthetase RGE_RS08200 PF02779 Transketolase, pyrimidine binding domain RGE_RS08200 PF02780 Transketolase, C-terminal domain RGE_RS08200 PF13292 1-deoxy-D-xylulose-5-phosphate synthase RGE_RS08205 PF02649 Type I GTP cyclohydrolase folE2 RGE_RS08210 PF01311 RGE_RS08210 RGE_RS08215 PF01313 RGE_RS08215 RGE_RS08220 PF00813 RGE_RS08220 RGE_RS08225 PF04347 RGE_RS08225 RGE_RS08230 PF01052 Surface presentation of antigens (SPOA) RGE_RS08235 PF01052 Surface presentation of antigens (SPOA) RGE_RS08235 PF02154 Flagellar motor switch protein FliM RGE_RS08240 PF03748 RGE_RS08240 RGE_RS08245 PF02120 Flagellar hook-length control protein FliK RGE_RS08250 PF02050 Flagellar FliJ protein RGE_RS08255 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain RGE_RS08255 PF02874 ATP synthase alpha/beta family, beta-barrel domain RGE_RS08260 PF02108 RGE_RS08260 RGE_RS08265 PF01706 FliG C-terminal domain RGE_RS08265 PF14841 FliG middle domain RGE_RS08265 PF14842 FliG N-terminal domain RGE_RS08270 PF01514 Secretory protein of YscJ/FliF family RGE_RS08270 PF08345 RGE_RS08270 RGE_RS08275 PF02049 RGE_RS08275 RGE_RS08280 PF00563 EAL domain RGE_RS08280 PF00990 GGDEF domain RGE_RS08285 PF12019 Type II transport protein GspH RGE_RS08290 PF16732 RGE_RS08290 RGE_RS08295 PF07238 PilZ domain RGE_RS08295 PF07317 Flagellar regulator YcgR RGE_RS08300 PF05400 Flagellar protein FliT RGE_RS08305 PF02561 Flagellar protein FliS RGE_RS08310 PF02465 RGE_RS08310 RGE_RS08310 PF07195 RGE_RS08310 RGE_RS08310 PF07196 Flagellin hook IN motif RGE_RS08315 PF00669 Bacterial flagellin N-terminal helical region RGE_RS08315 PF00700 Bacterial flagellin C-terminal helical region RGE_RS08320 PF00669 Bacterial flagellin N-terminal helical region RGE_RS08320 PF00700 Bacterial flagellin C-terminal helical region RGE_RS08325 PF00669 Bacterial flagellin N-terminal helical region RGE_RS08325 PF00700 Bacterial flagellin C-terminal helical region RGE_RS08330 PF13432 Tetratricopeptide repeat RGE_RS08330 PF13844 Glycosyl transferase family 41 RGE_RS08335 PF00535 Glycosyl transferase family 2 RGE_RS08340 PF13578 Methyltransferase domain RGE_RS08370 PF03275 UDP-galactopyranose mutase RGE_RS08370 PF13450 NAD(P)-binding Rossmann-like domain RGE_RS08375 PF05247 Flagellar transcriptional activator (FlhD) RGE_RS08380 PF05280 Flagellar transcriptional activator (FlhC) RGE_RS08390 PF01618 RGE_RS08390 RGE_RS08395 PF00691 OmpA family RGE_RS08395 PF13677 RGE_RS08395 RGE_RS08400 PF00072 Response regulator receiver domain RGE_RS08405 PF04344 Chemotaxis phosphatase, CheZ RGE_RS08410 PF01312 FlhB HrpN YscU SpaS Family RGE_RS08415 PF00771 FHIPEP family RGE_RS08420 PF00448 SRP54-type protein, GTPase domain RGE_RS08430 PF04539 Sigma-70 region 3 RGE_RS08430 PF04542 Sigma-70 region 2 RGE_RS08430 PF04545 Sigma-70, region 4 RGE_RS08435 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain RGE_RS08440 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RGE_RS08450 PF04316 Anti-sigma-28 factor, FlgM RGE_RS08455 PF13144 SAF-like RGE_RS08460 PF00460 Flagella basal body rod protein RGE_RS08465 PF00460 Flagella basal body rod protein RGE_RS08465 PF06429 Flagellar basal body rod FlgEFG protein C-terminal RGE_RS08470 PF03963 RGE_RS08470 RGE_RS08470 PF13860 FlgD Ig-like domain RGE_RS08470 PF13861 FlgD Tudor-like domain RGE_RS08475 PF00460 Flagella basal body rod protein RGE_RS08475 PF06429 Flagellar basal body rod FlgEFG protein C-terminal RGE_RS08475 PF07559 Flagellar basal body protein FlaE RGE_RS08480 PF00460 Flagella basal body rod protein RGE_RS08480 PF06429 Flagellar basal body rod FlgEFG protein C-terminal RGE_RS08485 PF13231 RGE_RS08485 RGE_RS08490 PF00109 Beta-ketoacyl synthase, N-terminal domain RGE_RS08490 PF02801 Beta-ketoacyl synthase, C-terminal domain RGE_RS08495 PF00550 Phosphopantetheine attachment site RGE_RS08500 PF12146 Putative lysophospholipase RGE_RS08505 PF00072 Response regulator receiver domain RGE_RS08505 PF00486 Transcriptional regulatory protein, C terminal RGE_RS08510 PF00512 His Kinase A (phospho-acceptor) domain RGE_RS08510 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RGE_RS08510 PF08521 RGE_RS08510 RGE_RS08515 PF00460 Flagella basal body rod protein RGE_RS08515 PF06429 Flagellar basal body rod FlgEFG protein C-terminal RGE_RS08520 PF02107 RGE_RS08520 RGE_RS08525 PF02119 RGE_RS08525 RGE_RS08530 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase RGE_RS08530 PF10135 RGE_RS08530 RGE_RS08535 PF06429 Flagellar basal body rod FlgEFG protein C-terminal RGE_RS08540 PF00669 Bacterial flagellin N-terminal helical region RGE_RS08545 PF08668 HDOD domain RGE_RS08555 PF00072 Response regulator receiver domain RGE_RS08555 PF03861 ANTAR domain RGE_RS08565 PF01627 Hpt domain RGE_RS08570 PF00072 Response regulator receiver domain RGE_RS08570 PF00563 EAL domain RGE_RS08570 PF00990 GGDEF domain RGE_RS08575 PF00990 GGDEF domain RGE_RS08585 PF02635 DsrE/DsrF-like family RGE_RS08590 PF01810 RGE_RS08590 RGE_RS08595 PF07399 RGE_RS08595 RGE_RS08605 PF02554 RGE_RS08605 RGE_RS08605 PF13722 RGE_RS08605 RGE_RS08610 PF01228 Glycine radical RGE_RS08610 PF02901 Pyruvate formate lyase RGE_RS08615 PF04055 Radical SAM superfamily RGE_RS08615 PF13353 4Fe-4S single cluster domain RGE_RS08620 PF01515 Phosphate acetyl/butaryl transferase RGE_RS08620 PF01575 MaoC like domain RGE_RS08625 PF00871 Acetokinase family RGE_RS08630 PF01226 Formate/nitrite transporter RGE_RS08640 PF06078 Bacterial protein of unknown function (DUF937) RGE_RS08645 PF00072 Response regulator receiver domain RGE_RS08645 PF04397 LytTr DNA-binding domain RGE_RS08650 PF06580 RGE_RS08650 RGE_RS08650 PF07694 5TMR of 5TMR-LYT RGE_RS08650 PF13492 GAF domain RGE_RS08655 PF00563 EAL domain RGE_RS08655 PF00990 GGDEF domain RGE_RS08655 PF13426 PAS domain RGE_RS08660 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain RGE_RS08660 PF12729 RGE_RS08660 RGE_RS08665 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain RGE_RS08665 PF00672 HAMP domain RGE_RS08665 PF12729 RGE_RS08665 RGE_RS08670 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain RGE_RS08670 PF00672 HAMP domain RGE_RS08670 PF12729 RGE_RS08670 RGE_RS08675 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain RGE_RS08675 PF12729 RGE_RS08675 RGE_RS08680 PF00920 Dehydratase family RGE_RS08685 PF01965 DJ-1/PfpI family RGE_RS08695 PF05025 RbsD / FucU transport protein family RGE_RS08700 PF00294 pfkB family carbohydrate kinase RGE_RS08705 PF00356 Bacterial regulatory proteins, lacI family RGE_RS08705 PF13377 Periplasmic binding protein-like domain RGE_RS08710 PF02653 RGE_RS08710 RGE_RS08715 PF00005 ABC transporter RGE_RS08720 PF13407 Periplasmic binding protein domain RGE_RS08725 PF13565 RGE_RS08725 RGE_RS08725 PF13683 RGE_RS08725 RGE_RS08735 PF01695 IstB-like ATP binding protein RGE_RS08740 PF00665 Integrase core domain RGE_RS08755 PF00665 Integrase core domain RGE_RS08755 PF09299 Mu transposase, C-terminal RGE_RS08760 PF13401 AAA domain RGE_RS08765 PF06527 RGE_RS08765 RGE_RS08770 PF13280 RGE_RS08770 RGE_RS08775 PF12128 RGE_RS08775 RGE_RS08795 PF05099 Tellurite resistance protein TerB RGE_RS08795 PF13208 RGE_RS08795 RGE_RS08795 PF15615 RGE_RS08795 RGE_RS08800 PF10923 RGE_RS08800 RGE_RS08805 PF00270 DEAD/DEAH box helicase RGE_RS08805 PF00271 Helicase conserved C-terminal domain RGE_RS08810 PF15615 RGE_RS08810 RGE_RS08820 PF00691 OmpA family RGE_RS08825 PF15611 RGE_RS08825 RGE_RS08830 PF00176 SNF2 family N-terminal domain RGE_RS08830 PF00271 Helicase conserved C-terminal domain RGE_RS08830 PF04471 Restriction endonuclease RGE_RS08840 PF00816 H-NS histone family RGE_RS08845 PF01336 OB-fold nucleic acid binding domain RGE_RS08845 PF02811 PHP domain RGE_RS08845 PF07733 Bacterial DNA polymerase III alpha subunit RGE_RS08845 PF14579 Helix-hairpin-helix motif RGE_RS08860 PF02586 Uncharacterised ACR, COG2135 RGE_RS08865 PF06080 RGE_RS08865 RGE_RS08870 PF00580 UvrD/REP helicase N-terminal domain RGE_RS08875 PF13175 AAA ATPase domain RGE_RS08905 PF00149 Calcineurin-like phosphoesterase RGE_RS08910 PF00571 CBS domain RGE_RS08910 PF01595 RGE_RS08910 RGE_RS08910 PF03471 Transporter associated domain RGE_RS08915 PF07277 RGE_RS08915 RGE_RS08920 PF01207 Dihydrouridine synthase (Dus) RGE_RS08925 PF00883 Cytosol aminopeptidase family, catalytic domain RGE_RS08935 PF04892 RGE_RS08935 RGE_RS08940 PF14344 RGE_RS08940 RGE_RS08945 PF00072 Response regulator receiver domain RGE_RS08945 PF00486 Transcriptional regulatory protein, C terminal RGE_RS08960 PF00456 Transketolase, thiamine diphosphate binding domain RGE_RS08970 PF00753 Metallo-beta-lactamase superfamily RGE_RS08975 PF11769 RGE_RS08975 RGE_RS08980 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal RGE_RS08980 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III RGE_RS08985 PF13649 Methyltransferase domain RGE_RS08990 PF12698 ABC-2 family transporter protein RGE_RS08995 PF00005 ABC transporter RGE_RS08995 PF12698 ABC-2 family transporter protein RGE_RS09000 PF13437 HlyD family secretion protein RGE_RS09000 PF13533 Biotin-lipoyl like RGE_RS09005 PF02321 Outer membrane efflux protein RGE_RS09010 PF00440 Bacterial regulatory proteins, tetR family RGE_RS09015 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RGE_RS09020 PF00072 Response regulator receiver domain RGE_RS09020 PF00486 Transcriptional regulatory protein, C terminal RGE_RS09025 PF00316 Fructose-1-6-bisphosphatase RGE_RS09030 PF01433 Peptidase family M1 RGE_RS09030 PF11940 Domain of unknown function (DUF3458) RGE_RS09035 PF13419 Haloacid dehalogenase-like hydrolase RGE_RS09040 PF00472 RF-1 domain RGE_RS09040 PF03462 PCRF domain RGE_RS09045 PF12697 Alpha/beta hydrolase family RGE_RS09050 PF00583 Acetyltransferase (GNAT) family RGE_RS09055 PF13487 HD domain RGE_RS09060 PF00501 AMP-binding enzyme RGE_RS09060 PF13193 AMP-binding enzyme C-terminal domain RGE_RS09070 PF00248 Aldo/keto reductase family RGE_RS09075 PF04073 Aminoacyl-tRNA editing domain RGE_RS09080 PF00072 Response regulator receiver domain RGE_RS09080 PF12728 Helix-turn-helix domain RGE_RS09085 PF02660 RGE_RS09085 RGE_RS09090 PF01042 Endoribonuclease L-PSP RGE_RS09100 PF01300 Telomere recombination RGE_RS09105 PF05681 RGE_RS09105 RGE_RS09105 PF05683 Fumarase C-terminus RGE_RS09110 PF03350 RGE_RS09110 RGE_RS09115 PF00501 AMP-binding enzyme RGE_RS09115 PF13193 AMP-binding enzyme C-terminal domain RGE_RS09115 PF16177 RGE_RS09115 RGE_RS09125 PF01790 RGE_RS09125 RGE_RS09130 PF00929 Exonuclease RGE_RS09150 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases RGE_RS09155 PF05940 RGE_RS09155 RGE_RS09160 PF02570 Precorrin-8X methylmutase RGE_RS09165 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases RGE_RS09170 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases RGE_RS09175 PF02571 RGE_RS09175 RGE_RS09180 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases RGE_RS09185 PF01890 Cobalamin synthesis G C-terminus RGE_RS09190 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases RGE_RS09195 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain RGE_RS09195 PF07685 CobB/CobQ-like glutamine amidotransferase domain RGE_RS09200 PF00072 Response regulator receiver domain RGE_RS09200 PF00512 His Kinase A (phospho-acceptor) domain RGE_RS09200 PF01627 Hpt domain RGE_RS09200 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RGE_RS09200 PF05227 CHASE3 domain RGE_RS09205 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RGE_RS09205 PF03466 LysR substrate binding domain RGE_RS09210 PF03807 NADP oxidoreductase coenzyme F420-dependent RGE_RS09220 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RGE_RS09220 PF03466 LysR substrate binding domain RGE_RS09225 PF04632 RGE_RS09225 RGE_RS09230 PF07869 RGE_RS09230 RGE_RS09235 PF13437 HlyD family secretion protein RGE_RS09235 PF13533 Biotin-lipoyl like RGE_RS09240 PF02321 Outer membrane efflux protein RGE_RS09245 PF04542 Sigma-70 region 2 RGE_RS09245 PF08281 Sigma-70, region 4 RGE_RS09255 PF01381 Helix-turn-helix RGE_RS09260 PF00589 Phage integrase family RGE_RS09265 PF09604 RGE_RS09265 RGE_RS09270 PF03814 RGE_RS09270 RGE_RS09275 PF03814 RGE_RS09275 RGE_RS09280 PF01546 Peptidase family M20/M25/M40 RGE_RS09290 PF00128 Alpha amylase, catalytic domain RGE_RS09290 PF02806 Alpha amylase, C-terminal all-beta domain RGE_RS09290 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) RGE_RS09305 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases RGE_RS09310 PF13508 Acetyltransferase (GNAT) domain RGE_RS09315 PF13649 Methyltransferase domain RGE_RS09320 PF00144 Beta-lactamase RGE_RS09325 PF07589 RGE_RS09325 RGE_RS09335 PF06245 RGE_RS09335 RGE_RS09340 PF05573 NosL RGE_RS09345 PF05573 NosL RGE_RS09350 PF12679 RGE_RS09350 RGE_RS09355 PF00005 ABC transporter RGE_RS09360 PF05048 Periplasmic copper-binding protein (NosD) RGE_RS09365 PF04205 FMN-binding domain RGE_RS09365 PF12801 RGE_RS09365 RGE_RS09370 PF13473 Cupredoxin-like domain RGE_RS09375 PF13442 Cytochrome C oxidase, cbb3-type, subunit III RGE_RS09380 PF02424 ApbE family RGE_RS09385 PF11162 RGE_RS09385 RGE_RS09390 PF00593 TonB dependent receptor RGE_RS09390 PF07715 TonB-dependent Receptor Plug Domain RGE_RS09395 PF03929 RGE_RS09395 RGE_RS09400 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases RGE_RS09405 PF01381 Helix-turn-helix RGE_RS09405 PF06114 Domain of unknown function (DUF955) RGE_RS09405 PF09856 RGE_RS09405 RGE_RS09410 PF03061 Thioesterase superfamily RGE_RS09415 PF00005 ABC transporter RGE_RS09420 PF01061 RGE_RS09420 RGE_RS09425 PF01979 Amidohydrolase family RGE_RS09430 PF07730 Histidine kinase RGE_RS09435 PF00072 Response regulator receiver domain RGE_RS09435 PF00196 Bacterial regulatory proteins, luxR family RGE_RS09445 PF00672 HAMP domain RGE_RS09445 PF00990 GGDEF domain RGE_RS09445 PF02743 Cache domain RGE_RS09455 PF13449 Esterase-like activity of phytase RGE_RS09460 PF02080 TrkA-C domain RGE_RS09460 PF06826 RGE_RS09460 RGE_RS09465 PF02548 Ketopantoate hydroxymethyltransferase RGE_RS09470 PF02569 Pantoate-beta-alanine ligase RGE_RS09475 PF01184 RGE_RS09475 RGE_RS09480 PF02525 Flavodoxin-like fold RGE_RS09485 PF03061 Thioesterase superfamily RGE_RS09490 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RGE_RS09490 PF03466 LysR substrate binding domain RGE_RS09495 PF00669 Bacterial flagellin N-terminal helical region RGE_RS09495 PF00700 Bacterial flagellin C-terminal helical region RGE_RS09500 PF13432 Tetratricopeptide repeat RGE_RS09500 PF13844 Glycosyl transferase family 41 RGE_RS09500 PF14559 Tetratricopeptide repeat RGE_RS09505 PF11871 RGE_RS09505 RGE_RS09505 PF13487 HD domain RGE_RS09525 PF00771 FHIPEP family RGE_RS09530 PF01312 FlhB HrpN YscU SpaS Family RGE_RS09535 PF01311 RGE_RS09535 RGE_RS09540 PF01313 RGE_RS09540 RGE_RS09545 PF00813 RGE_RS09545 RGE_RS09550 PF01052 Surface presentation of antigens (SPOA) RGE_RS09555 PF01052 Surface presentation of antigens (SPOA) RGE_RS09560 PF02049 RGE_RS09560 RGE_RS09565 PF01514 Secretory protein of YscJ/FliF family RGE_RS09565 PF08345 RGE_RS09565 RGE_RS09570 PF01706 FliG C-terminal domain RGE_RS09570 PF14841 FliG middle domain RGE_RS09570 PF14842 FliG N-terminal domain RGE_RS09575 PF02108 RGE_RS09575 RGE_RS09580 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain RGE_RS09585 PF02050 Flagellar FliJ protein RGE_RS09590 PF02465 RGE_RS09590 RGE_RS09590 PF07195 RGE_RS09590 RGE_RS09595 PF02561 Flagellar protein FliS RGE_RS09610 PF03748 RGE_RS09610 RGE_RS09615 PF04539 Sigma-70 region 3 RGE_RS09615 PF04542 Sigma-70 region 2 RGE_RS09615 PF04545 Sigma-70, region 4 RGE_RS09620 PF01618 RGE_RS09620 RGE_RS09625 PF00691 OmpA family RGE_RS09625 PF13677 RGE_RS09625 RGE_RS09630 PF04316 Anti-sigma-28 factor, FlgM RGE_RS09635 PF05130 FlgN protein RGE_RS09640 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase RGE_RS09645 PF13144 SAF-like RGE_RS09650 PF00460 Flagella basal body rod protein RGE_RS09655 PF00460 Flagella basal body rod protein RGE_RS09655 PF06429 Flagellar basal body rod FlgEFG protein C-terminal RGE_RS09660 PF03963 RGE_RS09660 RGE_RS09660 PF13860 FlgD Ig-like domain RGE_RS09665 PF00460 Flagella basal body rod protein RGE_RS09665 PF06429 Flagellar basal body rod FlgEFG protein C-terminal RGE_RS09665 PF07559 Flagellar basal body protein FlaE RGE_RS09670 PF00460 Flagella basal body rod protein RGE_RS09670 PF06429 Flagellar basal body rod FlgEFG protein C-terminal RGE_RS09675 PF00460 Flagella basal body rod protein RGE_RS09675 PF06429 Flagellar basal body rod FlgEFG protein C-terminal RGE_RS09680 PF02107 RGE_RS09680 RGE_RS09685 PF02119 RGE_RS09685 RGE_RS09690 PF10135 RGE_RS09690 RGE_RS09695 PF00460 Flagella basal body rod protein RGE_RS09695 PF06429 Flagellar basal body rod FlgEFG protein C-terminal RGE_RS09700 PF00669 Bacterial flagellin N-terminal helical region RGE_RS09710 PF01053 Cys/Met metabolism PLP-dependent enzyme RGE_RS09715 PF03401 Tripartite tricarboxylate transporter family receptor RGE_RS09725 PF00266 Aminotransferase class-V RGE_RS09735 PF13354 Beta-lactamase enzyme family RGE_RS09745 PF01205 Uncharacterized protein family UPF0029 RGE_RS09745 PF09186 Domain of unknown function (DUF1949) RGE_RS09755 PF09587 Bacterial capsule synthesis protein PGA_cap RGE_RS09765 PF01654 RGE_RS09765 RGE_RS09770 PF02322 RGE_RS09770 RGE_RS09775 PF13561 Enoyl-(Acyl carrier protein) reductase RGE_RS09785 PF01053 Cys/Met metabolism PLP-dependent enzyme RGE_RS09790 PF00291 Pyridoxal-phosphate dependent enzyme RGE_RS09790 PF00571 CBS domain RGE_RS09795 PF00581 Rhodanese-like domain RGE_RS09800 PF00291 Pyridoxal-phosphate dependent enzyme RGE_RS09805 PF00132 Bacterial transferase hexapeptide (six repeats) RGE_RS09810 PF13560 Helix-turn-helix domain RGE_RS09815 PF00072 Response regulator receiver domain RGE_RS09815 PF00497 Bacterial extracellular solute-binding proteins, family 3 RGE_RS09815 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RGE_RS09830 PF03412 Peptidase C39 family RGE_RS09860 PF05232 RGE_RS09860 RGE_RS09865 PF04828 Glutathione-dependent formaldehyde-activating enzyme RGE_RS09875 PF07992 Pyridine nucleotide-disulphide oxidoreductase RGE_RS09875 PF09242 Flavocytochrome c sulphide dehydrogenase, flavin-binding RGE_RS09880 PF07992 Pyridine nucleotide-disulphide oxidoreductase RGE_RS09885 PF13501 Sulfur oxidation protein SoxY RGE_RS09890 PF08770 Sulphur oxidation protein SoxZ RGE_RS09895 PF00881 Nitroreductase family RGE_RS09900 PF02613 Nitrate reductase delta subunit RGE_RS09905 PF04976 RGE_RS09905 RGE_RS09910 PF12800 4Fe-4S binding domain RGE_RS09910 PF13247 4Fe-4S dicluster domain RGE_RS09915 PF00384 Molybdopterin oxidoreductase RGE_RS09915 PF01568 Molydopterin dinucleotide binding domain RGE_RS09915 PF04879 Molybdopterin oxidoreductase Fe4S4 domain RGE_RS09920 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain RGE_RS09920 PF17200 RGE_RS09920 RGE_RS09925 PF13924 RGE_RS09925 RGE_RS09940 PF03415 Clostripain family RGE_RS09945 PF13424 Tetratricopeptide repeat RGE_RS09970 PF00593 TonB dependent receptor RGE_RS09970 PF07715 TonB-dependent Receptor Plug Domain RGE_RS09975 PF00209 Sodium:neurotransmitter symporter family RGE_RS09985 PF05787 Bacterial protein of unknown function (DUF839) RGE_RS09990 PF03572 Peptidase family S41 RGE_RS09990 PF11918 RGE_RS09990 RGE_RS09995 PF03942 RGE_RS09995 RGE_RS10000 PF00196 Bacterial regulatory proteins, luxR family RGE_RS10005 PF00512 His Kinase A (phospho-acceptor) domain RGE_RS10005 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RGE_RS10015 PF09723 RGE_RS10015 RGE_RS10020 PF02293 AmiS/UreI family transporter RGE_RS10025 PF03069 Acetamidase/Formamidase family RGE_RS10030 PF09723 RGE_RS10030 RGE_RS10035 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily RGE_RS10040 PF01212 Beta-eliminating lyase RGE_RS10045 PF00491 Arginase family RGE_RS10050 PF00072 Response regulator receiver domain RGE_RS10050 PF00512 His Kinase A (phospho-acceptor) domain RGE_RS10050 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RGE_RS10050 PF08448 PAS fold RGE_RS10060 PF10070 RGE_RS10060 RGE_RS10065 PF00361 NADH-Ubiquinone/plastoquinone (complex I), various chains RGE_RS10070 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RGE_RS10070 PF03466 LysR substrate binding domain RGE_RS10080 PF00072 Response regulator receiver domain RGE_RS10080 PF00486 Transcriptional regulatory protein, C terminal RGE_RS10085 PF00512 His Kinase A (phospho-acceptor) domain RGE_RS10085 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RGE_RS10085 PF02702 Osmosensitive K+ channel His kinase sensor domain RGE_RS10085 PF13492 GAF domain RGE_RS10085 PF13493 Domain of unknown function (DUF4118) RGE_RS10090 PF02669 RGE_RS10090 RGE_RS10095 PF00122 E1-E2 ATPase RGE_RS10095 PF00702 haloacid dehalogenase-like hydrolase RGE_RS10100 PF03814 RGE_RS10100 RGE_RS10105 PF09604 RGE_RS10105 RGE_RS10110 PF02558 Ketopantoate reductase PanE/ApbA RGE_RS10110 PF08546 Ketopantoate reductase PanE/ApbA C terminal RGE_RS10115 PF13460 NADH(P)-binding RGE_RS10120 PF01638 HxlR-like helix-turn-helix RGE_RS10125 PF01758 Sodium Bile acid symporter family RGE_RS10130 PF01451 Low molecular weight phosphotyrosine protein phosphatase RGE_RS10135 PF01451 Low molecular weight phosphotyrosine protein phosphatase RGE_RS10140 PF12840 Helix-turn-helix domain RGE_RS10145 PF13847 Methyltransferase domain RGE_RS10150 PF01810 RGE_RS10150 RGE_RS10155 PF06537 RGE_RS10155 RGE_RS10160 PF13343 Bacterial extracellular solute-binding protein RGE_RS10165 PF00593 TonB dependent receptor RGE_RS10165 PF07715 TonB-dependent Receptor Plug Domain RGE_RS10170 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RGE_RS10170 PF03459 TOBE domain RGE_RS10175 PF13467 Ribbon-helix-helix domain RGE_RS10180 PF01965 DJ-1/PfpI family RGE_RS10185 PF00005 ABC transporter RGE_RS10190 PF00528 Binding-protein-dependent transport system inner membrane component RGE_RS10195 PF03180 NLPA lipoprotein RGE_RS10200 PF03079 ARD/ARD' family RGE_RS10205 PF00501 AMP-binding enzyme RGE_RS10205 PF14535 AMP-binding enzyme C-terminal domain RGE_RS10210 PF00271 Helicase conserved C-terminal domain RGE_RS10210 PF12513 Mitochondrial degradasome RNA helicase subunit C terminal RGE_RS10215 PF03600 Citrate transporter RGE_RS10220 PF04060 Putative Fe-S cluster RGE_RS10220 PF12838 4Fe-4S dicluster domain RGE_RS10225 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase RGE_RS10225 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg RGE_RS10225 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain RGE_RS10225 PF12837 4Fe-4S binding domain RGE_RS10225 PF13370 4Fe-4S single cluster domain RGE_RS10225 PF17147 RGE_RS10225 RGE_RS10230 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit RGE_RS10230 PF10531 SLBB domain RGE_RS10230 PF13237 4Fe-4S dicluster domain RGE_RS10230 PF13375 RnfC Barrel sandwich hybrid domain RGE_RS10235 PF03116 RGE_RS10235 RGE_RS10240 PF04205 FMN-binding domain RGE_RS10245 PF02508 RGE_RS10245 RGE_RS10250 PF02508 RGE_RS10250 RGE_RS10260 PF00175 Oxidoreductase NAD-binding domain RGE_RS10260 PF00970 Oxidoreductase FAD-binding domain RGE_RS10265 PF02424 ApbE family RGE_RS10270 PF05951 RGE_RS10270 RGE_RS10275 PF01471 Putative peptidoglycan binding domain RGE_RS10275 PF03734 L,D-transpeptidase catalytic domain RGE_RS10280 PF00108 Thiolase, N-terminal domain RGE_RS10280 PF02803 Thiolase, C-terminal domain RGE_RS10285 PF02515 CoA-transferase family III RGE_RS10290 PF00441 Acyl-CoA dehydrogenase, C-terminal domain RGE_RS10290 PF02770 Acyl-CoA dehydrogenase, middle domain RGE_RS10290 PF02771 Acyl-CoA dehydrogenase, N-terminal domain RGE_RS10295 PF07805 HipA-like N-terminal domain RGE_RS10300 PF00441 Acyl-CoA dehydrogenase, C-terminal domain RGE_RS10300 PF02770 Acyl-CoA dehydrogenase, middle domain RGE_RS10300 PF02771 Acyl-CoA dehydrogenase, N-terminal domain RGE_RS10305 PF11614 IG-like fold at C-terminal of FixG, putative oxidoreductase RGE_RS10305 PF12801 RGE_RS10305 RGE_RS10305 PF13746 4Fe-4S dicluster domain RGE_RS10310 PF11953 Domain of unknown function (DUF3470) RGE_RS10310 PF13187 4Fe-4S dicluster domain RGE_RS10315 PF10006 RGE_RS10315 RGE_RS10320 PF00072 Response regulator receiver domain RGE_RS10320 PF00512 His Kinase A (phospho-acceptor) domain RGE_RS10320 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RGE_RS10320 PF05226 RGE_RS10320 RGE_RS10325 PF01476 LysM domain RGE_RS10325 PF04773 FecR protein RGE_RS10330 PF00391 PEP-utilising enzyme, mobile domain RGE_RS10330 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain RGE_RS10330 PF02896 PEP-utilising enzyme, TIM barrel domain RGE_RS10335 PF13442 Cytochrome C oxidase, cbb3-type, subunit III RGE_RS10340 PF00034 Cytochrome c RGE_RS10340 PF13442 Cytochrome C oxidase, cbb3-type, subunit III RGE_RS10345 PF11854 RGE_RS10345 RGE_RS10350 PF09699 Doubled CXXCH motif (Paired_CXXCH_1) RGE_RS10355 PF12833 Helix-turn-helix domain RGE_RS10355 PF14525 RGE_RS10355 RGE_RS10360 PF00289 Carbamoyl-phosphate synthase L chain, N-terminal domain RGE_RS10360 PF00364 Biotin-requiring enzyme RGE_RS10360 PF00682 HMGL-like RGE_RS10360 PF02436 Conserved carboxylase domain RGE_RS10360 PF02785 Biotin carboxylase C-terminal domain RGE_RS10360 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain RGE_RS10365 PF02313 Fumarate reductase subunit D RGE_RS10370 PF02300 Fumarate reductase subunit C RGE_RS10375 PF13085 2Fe-2S iron-sulfur cluster binding domain RGE_RS10375 PF13183 4Fe-4S dicluster domain RGE_RS10380 PF00890 FAD binding domain RGE_RS10380 PF02910 Fumarate reductase flavoprotein C-term RGE_RS10385 PF00072 Response regulator receiver domain RGE_RS10395 PF04191 Phospholipid methyltransferase RGE_RS10400 PF08241 Methyltransferase domain RGE_RS10405 PF12146 Putative lysophospholipase RGE_RS10410 PF04828 Glutathione-dependent formaldehyde-activating enzyme RGE_RS10415 PF01475 Ferric uptake regulator family RGE_RS10420 PF02082 Transcriptional regulator RGE_RS10425 PF05940 RGE_RS10425 RGE_RS10430 PF03061 Thioesterase superfamily RGE_RS10435 PF04055 Radical SAM superfamily RGE_RS10440 PF00158 Sigma-54 interaction domain RGE_RS10440 PF02954 Bacterial regulatory protein, Fis family RGE_RS10440 PF08448 PAS fold RGE_RS10445 PF00355 Rieske [2Fe-2S] domain RGE_RS10450 PF00175 Oxidoreductase NAD-binding domain RGE_RS10450 PF00970 Oxidoreductase FAD-binding domain RGE_RS10455 PF00085 Thioredoxin RGE_RS10460 PF00293 NUDIX domain RGE_RS10460 PF00753 Metallo-beta-lactamase superfamily RGE_RS10465 PF04376 RGE_RS10465 RGE_RS10465 PF04377 RGE_RS10465 RGE_RS10470 PF03588 Leucyl/phenylalanyl-tRNA protein transferase RGE_RS10475 PF00326 Prolyl oligopeptidase family RGE_RS10475 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain RGE_RS10480 PF07152 YaeQ protein RGE_RS10490 PF01432 Peptidase family M3 RGE_RS10495 PF00072 Response regulator receiver domain RGE_RS10495 PF00512 His Kinase A (phospho-acceptor) domain RGE_RS10495 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RGE_RS10495 PF08447 PAS fold RGE_RS10500 PF00072 Response regulator receiver domain RGE_RS10500 PF04397 LytTr DNA-binding domain RGE_RS10505 PF06580 RGE_RS10505 RGE_RS10510 PF00892 EamA-like transporter family RGE_RS10515 PF02811 PHP domain RGE_RS10520 PF00005 ABC transporter RGE_RS10525 PF02687 RGE_RS10525 RGE_RS10525 PF12704 MacB-like periplasmic core domain RGE_RS10535 PF01368 DHH family RGE_RS10535 PF02272 DHHA1 domain RGE_RS10540 PF00959 Phage lysozyme RGE_RS10545 PF00092 von Willebrand factor type A domain RGE_RS10545 PF07584 RGE_RS10545 RGE_RS10545 PF13519 von Willebrand factor type A domain RGE_RS10550 PF01882 RGE_RS10550 RGE_RS10555 PF07726 ATPase family associated with various cellular activities (AAA) RGE_RS10560 PF13365 Trypsin-like peptidase domain RGE_RS10565 PF01026 TatD related DNase RGE_RS10570 PF03167 Uracil DNA glycosylase superfamily RGE_RS10575 PF01841 Transglutaminase-like superfamily RGE_RS10575 PF12969 Domain of Unknown Function with PDB structure (DUF3857) RGE_RS10585 PF00437 Type II/IV secretion system protein RGE_RS10585 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain RGE_RS10590 PF07331 RGE_RS10590 RGE_RS10595 PF01970 RGE_RS10595 RGE_RS10600 PF05977 Transmembrane secretion effector RGE_RS10605 PF01019 Gamma-glutamyltranspeptidase RGE_RS10610 PF00892 EamA-like transporter family RGE_RS10615 PF13561 Enoyl-(Acyl carrier protein) reductase RGE_RS10620 PF00085 Thioredoxin RGE_RS10625 PF09967 RGE_RS10625 RGE_RS10625 PF13203 RGE_RS10625 RGE_RS10655 PF00873 AcrB/AcrD/AcrF family RGE_RS10660 PF16576 RGE_RS10660 RGE_RS10665 PF05099 Tellurite resistance protein TerB RGE_RS10670 PF01066 CDP-alcohol phosphatidyltransferase RGE_RS10675 PF04187 Protein of unknown function, DUF399 RGE_RS10680 PF00440 Bacterial regulatory proteins, tetR family RGE_RS10685 PF00027 Cyclic nucleotide-binding domain RGE_RS10685 PF13545 Crp-like helix-turn-helix domain RGE_RS10690 PF00122 E1-E2 ATPase RGE_RS10690 PF00689 Cation transporting ATPase, C-terminus RGE_RS10690 PF00690 Cation transporter/ATPase, N-terminus RGE_RS10690 PF00702 haloacid dehalogenase-like hydrolase RGE_RS10695 PF00011 Hsp20/alpha crystallin family RGE_RS10700 PF00011 Hsp20/alpha crystallin family RGE_RS10705 PF00011 Hsp20/alpha crystallin family RGE_RS10710 PF01548 RGE_RS10710 RGE_RS10710 PF02371 RGE_RS10710 RGE_RS10720 PF05901 RGE_RS10720 RGE_RS10725 PF04185 Phosphoesterase family RGE_RS10725 PF05506 RGE_RS10725 RGE_RS10730 PF00226 DnaJ domain RGE_RS10730 PF01556 DnaJ C terminal domain RGE_RS10735 PF13591 MerR HTH family regulatory protein RGE_RS10740 PF00005 ABC transporter RGE_RS10745 PF00034 Cytochrome c RGE_RS10750 PF03264 NapC/NirT cytochrome c family, N-terminal region RGE_RS10755 PF03379 RGE_RS10755 RGE_RS10760 PF01578 RGE_RS10760 RGE_RS10765 PF04995 RGE_RS10765 RGE_RS10770 PF03100 CcmE RGE_RS10775 PF01578 RGE_RS10775 RGE_RS10775 PF16327 RGE_RS10775 RGE_RS10780 PF08534 Redoxin RGE_RS10785 PF03918 Cytochrome C biogenesis protein RGE_RS10790 PF13428 Tetratricopeptide repeat RGE_RS10795 PF12697 Alpha/beta hydrolase family RGE_RS10800 PF05552 Conserved TM helix RGE_RS10805 PF00128 Alpha amylase, catalytic domain RGE_RS10805 PF16657 RGE_RS10805 RGE_RS10810 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RGE_RS10810 PF03466 LysR substrate binding domain RGE_RS10815 PF07690 Major Facilitator Superfamily RGE_RS10820 PF01965 DJ-1/PfpI family RGE_RS10825 PF06904 RGE_RS10825 RGE_RS10835 PF12801 RGE_RS10835 RGE_RS10840 PF03239 RGE_RS10840 RGE_RS10845 PF13473 Cupredoxin-like domain RGE_RS10850 PF04966 Carbohydrate-selective porin, OprB family RGE_RS10855 PF10634 Fe2+ transport protein RGE_RS10860 PF04357 RGE_RS10860 RGE_RS10865 PF01103 Surface antigen RGE_RS10870 PF00924 Mechanosensitive ion channel RGE_RS10875 PF03358 NADPH-dependent FMN reductase RGE_RS10880 PF00082 Subtilase family RGE_RS10880 PF05345 Putative Ig domain RGE_RS10885 PF00270 DEAD/DEAH box helicase RGE_RS10885 PF00271 Helicase conserved C-terminal domain RGE_RS10885 PF16124 RGE_RS10885 RGE_RS10895 PF00128 Alpha amylase, catalytic domain RGE_RS10900 PF02446 4-alpha-glucanotransferase RGE_RS10905 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain RGE_RS10905 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I RGE_RS10905 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II RGE_RS10905 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III RGE_RS10915 PF01145 SPFH domain / Band 7 family RGE_RS10920 PF02417 RGE_RS10920 RGE_RS10930 PF00375 Sodium:dicarboxylate symporter family RGE_RS10940 PF04955 RGE_RS10940 RGE_RS10950 PF04828 Glutathione-dependent formaldehyde-activating enzyme RGE_RS10955 PF08818 Domain of unknown function (DU1801) RGE_RS10960 PF08327 Activator of Hsp90 ATPase homolog 1-like protein RGE_RS10970 PF00857 Isochorismatase family RGE_RS10975 PF13795 RGE_RS10975 RGE_RS10980 PF13145 PPIC-type PPIASE domain RGE_RS11005 PF00593 TonB dependent receptor RGE_RS11005 PF07715 TonB-dependent Receptor Plug Domain RGE_RS11010 PF03929 RGE_RS11010 RGE_RS11015 PF00072 Response regulator receiver domain RGE_RS11015 PF00512 His Kinase A (phospho-acceptor) domain RGE_RS11015 PF01627 Hpt domain RGE_RS11015 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RGE_RS11015 PF02743 Cache domain RGE_RS11015 PF08448 PAS fold RGE_RS11020 PF00072 Response regulator receiver domain RGE_RS11020 PF00512 His Kinase A (phospho-acceptor) domain RGE_RS11020 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RGE_RS11020 PF08447 PAS fold RGE_RS11025 PF00224 Pyruvate kinase, barrel domain RGE_RS11030 PF04101 Glycosyltransferase family 28 C-terminal domain RGE_RS11035 PF00149 Calcineurin-like phosphoesterase RGE_RS11045 PF00107 Zinc-binding dehydrogenase RGE_RS11045 PF08240 Alcohol dehydrogenase GroES-like domain RGE_RS11045 PF13823 Alcohol dehydrogenase GroES-associated RGE_RS11060 PF01370 NAD dependent epimerase/dehydratase family RGE_RS11060 PF13781 RGE_RS11060 RGE_RS11065 PF10027 RGE_RS11065 RGE_RS11070 PF01381 Helix-turn-helix RGE_RS11070 PF13239 RGE_RS11070 RGE_RS11080 PF00067 Cytochrome P450 RGE_RS11085 PF00072 Response regulator receiver domain RGE_RS11085 PF00512 His Kinase A (phospho-acceptor) domain RGE_RS11085 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RGE_RS11085 PF08448 PAS fold RGE_RS11090 PF00072 Response regulator receiver domain RGE_RS11095 PF00512 His Kinase A (phospho-acceptor) domain RGE_RS11095 PF00672 HAMP domain RGE_RS11095 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RGE_RS11100 PF01547 Bacterial extracellular solute-binding protein RGE_RS11110 PF07221 N-acylglucosamine 2-epimerase (GlcNAc 2-epimerase) RGE_RS11115 PF12802 MarR family RGE_RS11120 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain RGE_RS11120 PF00672 HAMP domain RGE_RS11125 PF00027 Cyclic nucleotide-binding domain RGE_RS11125 PF13545 Crp-like helix-turn-helix domain RGE_RS11135 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain RGE_RS11135 PF00672 HAMP domain RGE_RS11135 PF08376 Nitrate and nitrite sensing RGE_RS11150 PF00149 Calcineurin-like phosphoesterase RGE_RS11155 PF03401 Tripartite tricarboxylate transporter family receptor RGE_RS11165 PF10006 RGE_RS11165 RGE_RS11170 PF00510 Cytochrome c oxidase subunit III RGE_RS11175 PF03626 RGE_RS11175 RGE_RS11190 PF02107 RGE_RS11190 RGE_RS11195 PF00561 alpha/beta hydrolase fold RGE_RS11200 PF05532 CsbD-like RGE_RS11205 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain RGE_RS11205 PF00672 HAMP domain RGE_RS11205 PF12729 RGE_RS11205 RGE_RS11210 PF02867 Ribonucleotide reductase, barrel domain RGE_RS11220 PF08212 Lipocalin-like domain RGE_RS11225 PF13087 AAA domain RGE_RS11225 PF13245 Part of AAA domain RGE_RS11230 PF00107 Zinc-binding dehydrogenase RGE_RS11230 PF08240 Alcohol dehydrogenase GroES-like domain RGE_RS11235 PF10001 RGE_RS11235 RGE_RS11240 PF00072 Response regulator receiver domain RGE_RS11240 PF00486 Transcriptional regulatory protein, C terminal RGE_RS11245 PF00512 His Kinase A (phospho-acceptor) domain RGE_RS11245 PF00672 HAMP domain RGE_RS11245 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RGE_RS11250 PF00884 Sulfatase RGE_RS11250 PF08019 RGE_RS11250 RGE_RS11260 PF03390 RGE_RS11260 RGE_RS11265 PF01557 Fumarylacetoacetate (FAA) hydrolase family RGE_RS11270 PF00583 Acetyltransferase (GNAT) family RGE_RS11270 PF08218 Citrate lyase ligase C-terminal domain RGE_RS11275 PF06857 RGE_RS11275 RGE_RS11280 PF03328 HpcH/HpaI aldolase/citrate lyase family RGE_RS11285 PF04223 Citrate lyase, alpha subunit (CitF) RGE_RS11290 PF03802 RGE_RS11290 RGE_RS11295 PF01874 ATP:dephospho-CoA triphosphoribosyl transferase RGE_RS11300 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RGE_RS11300 PF17203 RGE_RS11300 RGE_RS11305 PF00072 Response regulator receiver domain RGE_RS11305 PF09339 IclR helix-turn-helix domain RGE_RS11310 PF06821 Serine hydrolase RGE_RS11320 PF00111 2Fe-2S iron-sulfur cluster binding domain RGE_RS11320 PF01799 [2Fe-2S] binding domain RGE_RS11325 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase RGE_RS11330 PF04828 Glutathione-dependent formaldehyde-activating enzyme RGE_RS11335 PF00072 Response regulator receiver domain RGE_RS11335 PF00512 His Kinase A (phospho-acceptor) domain RGE_RS11335 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RGE_RS11335 PF08447 PAS fold RGE_RS11335 PF08448 PAS fold RGE_RS11335 PF13426 PAS domain RGE_RS11340 PF06745 KaiC RGE_RS11345 PF00072 Response regulator receiver domain RGE_RS11345 PF00512 His Kinase A (phospho-acceptor) domain RGE_RS11345 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RGE_RS11360 PF13519 von Willebrand factor type A domain RGE_RS11375 PF07726 ATPase family associated with various cellular activities (AAA) RGE_RS11380 PF00072 Response regulator receiver domain RGE_RS11380 PF00196 Bacterial regulatory proteins, luxR family RGE_RS11385 PF07730 Histidine kinase RGE_RS11400 PF00593 TonB dependent receptor RGE_RS11400 PF07715 TonB-dependent Receptor Plug Domain RGE_RS11405 PF13738 Pyridine nucleotide-disulphide oxidoreductase RGE_RS11410 PF00037 4Fe-4S binding domain RGE_RS11410 PF11953 Domain of unknown function (DUF3470) RGE_RS11410 PF12800 4Fe-4S binding domain RGE_RS11415 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases RGE_RS11420 PF01507 Phosphoadenosine phosphosulfate reductase family RGE_RS11425 PF06073 RGE_RS11425 RGE_RS11430 PF01077 Nitrite and sulphite reductase 4Fe-4S domain RGE_RS11430 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain RGE_RS11435 PF01734 Patatin-like phospholipase RGE_RS11440 PF01381 Helix-turn-helix RGE_RS11440 PF07883 Cupin domain RGE_RS11445 PF00892 EamA-like transporter family RGE_RS11450 PF01272 Transcription elongation factor, GreA/GreB, C-term RGE_RS11455 PF09361 RGE_RS11455 RGE_RS11460 PF00850 Histone deacetylase domain RGE_RS11465 PF03061 Thioesterase superfamily RGE_RS11470 PF00881 Nitroreductase family RGE_RS11475 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain RGE_RS11475 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain RGE_RS11480 PF02358 Trehalose-phosphatase RGE_RS11485 PF00982 Glycosyltransferase family 20 RGE_RS11490 PF02646 RGE_RS11490 RGE_RS11495 PF07690 Major Facilitator Superfamily RGE_RS11500 PF00462 Glutaredoxin RGE_RS11505 PF01432 Peptidase family M3 RGE_RS11510 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain RGE_RS11510 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain RGE_RS11515 PF00072 Response regulator receiver domain RGE_RS11515 PF00196 Bacterial regulatory proteins, luxR family RGE_RS11520 PF00512 His Kinase A (phospho-acceptor) domain RGE_RS11520 PF00989 PAS fold RGE_RS11520 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RGE_RS11525 PF00456 Transketolase, thiamine diphosphate binding domain RGE_RS11530 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) RGE_RS11530 PF00364 Biotin-requiring enzyme RGE_RS11530 PF02817 e3 binding domain RGE_RS11535 PF00364 Biotin-requiring enzyme RGE_RS11535 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain RGE_RS11535 PF07992 Pyridine nucleotide-disulphide oxidoreductase RGE_RS11540 PF01355 High potential iron-sulfur protein RGE_RS11545 PF00563 EAL domain RGE_RS11545 PF00990 GGDEF domain RGE_RS11550 PF00293 NUDIX domain RGE_RS11550 PF14803 Nudix N-terminal RGE_RS11555 PF01557 Fumarylacetoacetate (FAA) hydrolase family RGE_RS11560 PF13417 Glutathione S-transferase, N-terminal domain RGE_RS11565 PF02578 Multi-copper polyphenol oxidoreductase laccase RGE_RS11570 PF07167 RGE_RS11570 RGE_RS11575 PF00108 Thiolase, N-terminal domain RGE_RS11575 PF02803 Thiolase, C-terminal domain RGE_RS11580 PF00106 short chain dehydrogenase RGE_RS11585 PF02588 RGE_RS11585 RGE_RS11590 PF10981 RGE_RS11590 RGE_RS11595 PF09955 RGE_RS11595 RGE_RS11600 PF00581 Rhodanese-like domain RGE_RS11605 PF01909 Nucleotidyltransferase domain RGE_RS11605 PF01966 HD domain RGE_RS11605 PF08335 GlnD PII-uridylyltransferase RGE_RS11610 PF00557 Metallopeptidase family M24 RGE_RS11615 PF02769 AIR synthase related protein, C-terminal domain RGE_RS11615 PF13507 CobB/CobQ-like glutamine amidotransferase domain RGE_RS11620 PF00005 ABC transporter RGE_RS11625 PF04280 Tim44-like domain RGE_RS11630 PF04306 RGE_RS11630 RGE_RS11635 PF02698 DUF218 domain RGE_RS11640 PF05359 RGE_RS11640 RGE_RS11645 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RGE_RS11645 PF03466 LysR substrate binding domain RGE_RS11650 PF02525 Flavodoxin-like fold RGE_RS11655 PF00441 Acyl-CoA dehydrogenase, C-terminal domain RGE_RS11655 PF02770 Acyl-CoA dehydrogenase, middle domain RGE_RS11655 PF02771 Acyl-CoA dehydrogenase, N-terminal domain RGE_RS11660 PF01625 Peptide methionine sulfoxide reductase RGE_RS11675 PF11731 RGE_RS11675 RGE_RS11680 PF00717 Peptidase S24-like RGE_RS11680 PF01726 LexA DNA binding domain RGE_RS11685 PF00710 Asparaginase RGE_RS11690 PF02566 OsmC-like protein RGE_RS11695 PF01047 MarR family RGE_RS11700 PF00005 ABC transporter RGE_RS11700 PF12848 ABC transporter RGE_RS11700 PF16326 RGE_RS11700 RGE_RS11705 PF05175 Methyltransferase small domain RGE_RS11710 PF01546 Peptidase family M20/M25/M40 RGE_RS11710 PF07687 Peptidase dimerisation domain RGE_RS11715 PF00437 Type II/IV secretion system protein RGE_RS11720 PF00132 Bacterial transferase hexapeptide (six repeats) RGE_RS11720 PF14602 Hexapeptide repeat of succinyl-transferase RGE_RS11720 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal RGE_RS11725 PF00155 Aminotransferase class I and II RGE_RS11730 PF00108 Thiolase, N-terminal domain RGE_RS11730 PF02803 Thiolase, C-terminal domain RGE_RS11735 PF00856 SET domain RGE_RS11740 PF14489 QueF-like protein RGE_RS11745 PF02463 RecF/RecN/SMC N terminal domain RGE_RS11745 PF06470 SMC proteins Flexible Hinge Domain RGE_RS11755 PF00533 BRCA1 C Terminus (BRCT) domain RGE_RS11755 PF01653 NAD-dependent DNA ligase adenylation domain RGE_RS11755 PF03119 NAD-dependent DNA ligase C4 zinc finger domain RGE_RS11755 PF03120 NAD-dependent DNA ligase OB-fold domain RGE_RS11755 PF12826 Helix-hairpin-helix motif RGE_RS11755 PF14520 Helix-hairpin-helix domain RGE_RS11760 PF01327 Polypeptide deformylase RGE_RS11770 PF13472 GDSL-like Lipase/Acylhydrolase family RGE_RS11775 PF00005 ABC transporter RGE_RS11780 PF16313 RGE_RS11780 RGE_RS11780 PF17148 RGE_RS11780 RGE_RS11785 PF01408 Oxidoreductase family, NAD-binding Rossmann fold RGE_RS11790 PF12698 ABC-2 family transporter protein RGE_RS11795 PF00005 ABC transporter RGE_RS11800 PF13437 HlyD family secretion protein RGE_RS11800 PF13533 Biotin-lipoyl like RGE_RS11805 PF00440 Bacterial regulatory proteins, tetR family RGE_RS11810 PF00005 ABC transporter RGE_RS11810 PF12848 ABC transporter RGE_RS11815 PF00270 DEAD/DEAH box helicase RGE_RS11815 PF00271 Helicase conserved C-terminal domain RGE_RS11820 PF00486 Transcriptional regulatory protein, C terminal RGE_RS11825 PF13616 PPIC-type PPIASE domain RGE_RS11830 PF01722 BolA-like protein RGE_RS11835 PF04279 RGE_RS11835 RGE_RS11840 PF01641 SelR domain RGE_RS11845 PF02696 RGE_RS11845 RGE_RS11850 PF02653 RGE_RS11850 RGE_RS11855 PF02653 RGE_RS11855 RGE_RS11860 PF00005 ABC transporter RGE_RS11860 PF12399 Branched-chain amino acid ATP-binding cassette transporter RGE_RS11865 PF00005 ABC transporter RGE_RS11870 PF01494 FAD binding domain RGE_RS11875 PF00378 Enoyl-CoA hydratase/isomerase family RGE_RS11875 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain RGE_RS11875 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain RGE_RS11880 PF00108 Thiolase, N-terminal domain RGE_RS11880 PF02803 Thiolase, C-terminal domain RGE_RS11885 PF00441 Acyl-CoA dehydrogenase, C-terminal domain RGE_RS11885 PF02770 Acyl-CoA dehydrogenase, middle domain RGE_RS11885 PF02771 Acyl-CoA dehydrogenase, N-terminal domain RGE_RS11885 PF12806 RGE_RS11885 RGE_RS11890 PF07876 Stress responsive A/B Barrel Domain RGE_RS11895 PF13561 Enoyl-(Acyl carrier protein) reductase RGE_RS11900 PF00107 Zinc-binding dehydrogenase RGE_RS11900 PF16884 RGE_RS11900 RGE_RS11905 PF13673 Acetyltransferase (GNAT) domain RGE_RS11910 PF00106 short chain dehydrogenase RGE_RS11915 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase RGE_RS11920 PF03486 HI0933-like protein RGE_RS11925 PF00575 S1 RNA binding domain RGE_RS11925 PF09371 Tex-like protein N-terminal domain RGE_RS11925 PF12836 Helix-hairpin-helix motif RGE_RS11925 PF16921 RGE_RS11925 RGE_RS11930 PF13632 Glycosyl transferase family group 2 RGE_RS11935 PF04349 Periplasmic glucan biosynthesis protein, MdoG RGE_RS11945 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) RGE_RS11945 PF02824 TGS domain RGE_RS11945 PF03129 Anticodon binding domain RGE_RS11945 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain RGE_RS11950 PF00707 Translation initiation factor IF-3, C-terminal domain RGE_RS11950 PF05198 Translation initiation factor IF-3, N-terminal domain RGE_RS11955 PF01632 Ribosomal protein L35 RGE_RS11960 PF00453 Ribosomal protein L20 RGE_RS11965 PF01409 tRNA synthetases class II core domain (F) RGE_RS11965 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain RGE_RS11970 PF01588 Putative tRNA binding domain RGE_RS11970 PF03147 Ferredoxin-fold anticodon binding domain RGE_RS11970 PF03483 B3/4 domain RGE_RS11970 PF03484 tRNA synthetase B5 domain RGE_RS11975 PF00216 Bacterial DNA-binding protein RGE_RS11980 PF13411 MerR HTH family regulatory protein RGE_RS11990 PF00196 Bacterial regulatory proteins, luxR family RGE_RS11990 PF03472 Autoinducer binding domain RGE_RS12005 PF16868 RGE_RS12005 RGE_RS12020 PF02579 Dinitrogenase iron-molybdenum cofactor RGE_RS12035 PF13628 RGE_RS12035 RGE_RS12055 PF00072 Response regulator receiver domain RGE_RS12055 PF00158 Sigma-54 interaction domain RGE_RS12055 PF02954 Bacterial regulatory protein, Fis family RGE_RS12060 PF16363 RGE_RS12060 RGE_RS12065 PF10096 RGE_RS12065 RGE_RS12070 PF13439 Glycosyltransferase Family 4 RGE_RS12070 PF13692 Glycosyl transferases group 1 RGE_RS12075 PF01028 Eukaryotic DNA topoisomerase I, catalytic core RGE_RS12085 PF00534 Glycosyl transferases group 1 RGE_RS12090 PF01075 Glycosyltransferase family 9 (heptosyltransferase) RGE_RS12095 PF00535 Glycosyl transferase family 2 RGE_RS12100 PF02543 Carbamoyltransferase RGE_RS12100 PF16861 RGE_RS12100 RGE_RS12105 PF01075 Glycosyltransferase family 9 (heptosyltransferase) RGE_RS12110 PF13242 HAD-hyrolase-like RGE_RS12115 PF00534 Glycosyl transferases group 1 RGE_RS12115 PF13439 Glycosyltransferase Family 4 RGE_RS12120 PF00857 Isochorismatase family RGE_RS12125 PF00106 short chain dehydrogenase RGE_RS12135 PF00534 Glycosyl transferases group 1 RGE_RS12135 PF13439 Glycosyltransferase Family 4 RGE_RS12140 PF01569 PAP2 superfamily RGE_RS12145 PF10005 RGE_RS12145 RGE_RS12145 PF15887 RGE_RS12145 RGE_RS12160 PF00072 Response regulator receiver domain RGE_RS12170 PF13561 Enoyl-(Acyl carrier protein) reductase RGE_RS12175 PF03060 Nitronate monooxygenase RGE_RS12180 PF01814 Hemerythrin HHE cation binding domain RGE_RS12185 PF04226 RGE_RS12185 RGE_RS12195 PF07332 RGE_RS12195 RGE_RS12200 PF08212 Lipocalin-like domain RGE_RS12205 PF04239 Protein of unknown function (DUF421) RGE_RS12215 PF09537 Domain of unknown function (DUF2383) RGE_RS12225 PF13091 PLD-like domain RGE_RS12235 PF01594 RGE_RS12235 RGE_RS12240 PF04972 BON domain RGE_RS12245 PF01814 Hemerythrin HHE cation binding domain RGE_RS12250 PF01814 Hemerythrin HHE cation binding domain RGE_RS12255 PF00309 RGE_RS12255 RGE_RS12255 PF04552 Sigma-54, DNA binding domain RGE_RS12255 PF04963 Sigma-54 factor, core binding domain RGE_RS12260 PF02517 CAAX protease self-immunity RGE_RS12265 PF03401 Tripartite tricarboxylate transporter family receptor RGE_RS12270 PF02615 Malate/L-lactate dehydrogenase RGE_RS12275 PF04295 RGE_RS12275 RGE_RS12280 PF08666 SAF domain RGE_RS12285 PF00593 TonB dependent receptor RGE_RS12285 PF07715 TonB-dependent Receptor Plug Domain RGE_RS12290 PF00296 Luciferase-like monooxygenase RGE_RS12295 PF04055 Radical SAM superfamily RGE_RS12295 PF13186 Iron-sulfur cluster-binding domain RGE_RS12300 PF00884 Sulfatase RGE_RS12305 PF04143 RGE_RS12305 RGE_RS12315 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) RGE_RS12320 PF00205 Thiamine pyrophosphate enzyme, central domain RGE_RS12320 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain RGE_RS12320 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain RGE_RS12325 PF00202 Aminotransferase class-III RGE_RS12330 PF09084 NMT1/THI5 like RGE_RS12335 PF00005 ABC transporter RGE_RS12340 PF00528 Binding-protein-dependent transport system inner membrane component RGE_RS12345 PF00732 GMC oxidoreductase RGE_RS12345 PF05199 GMC oxidoreductase RGE_RS12350 PF13379 NMT1-like family RGE_RS12355 PF03459 TOBE domain RGE_RS12360 PF06821 Serine hydrolase RGE_RS12365 PF13379 NMT1-like family RGE_RS12370 PF00296 Luciferase-like monooxygenase RGE_RS12375 PF00528 Binding-protein-dependent transport system inner membrane component RGE_RS12380 PF00005 ABC transporter RGE_RS12385 PF00142 4Fe-4S iron sulfur cluster binding proteins, NifH/frxC family RGE_RS12390 PF00148 Nitrogenase component 1 type Oxidoreductase RGE_RS12395 PF00148 Nitrogenase component 1 type Oxidoreductase RGE_RS12405 PF00497 Bacterial extracellular solute-binding proteins, family 3 RGE_RS12410 PF00528 Binding-protein-dependent transport system inner membrane component RGE_RS12415 PF00528 Binding-protein-dependent transport system inner membrane component RGE_RS12420 PF00005 ABC transporter RGE_RS12430 PF13673 Acetyltransferase (GNAT) domain RGE_RS12435 PF00155 Aminotransferase class I and II RGE_RS12440 PF13409 Glutathione S-transferase, N-terminal domain RGE_RS12440 PF13410 Glutathione S-transferase, C-terminal domain RGE_RS12445 PF00593 TonB dependent receptor RGE_RS12445 PF07715 TonB-dependent Receptor Plug Domain RGE_RS12450 PF07690 Major Facilitator Superfamily RGE_RS12470 PF01476 LysM domain RGE_RS12470 PF11860 RGE_RS12470 RGE_RS12475 PF10106 RGE_RS12475 RGE_RS12475 PF13296 RGE_RS12475 RGE_RS12480 PF01609 Transposase DDE domain RGE_RS12480 PF05598 RGE_RS12480 RGE_RS12490 PF05954 Phage late control gene D protein (GPD) RGE_RS12490 PF10106 RGE_RS12490 RGE_RS12490 PF13296 RGE_RS12490 RGE_RS12500 PF00004 ATPase family associated with various cellular activities (AAA) RGE_RS12500 PF02861 Clp amino terminal domain RGE_RS12500 PF07724 AAA domain (Cdc48 subfamily) RGE_RS12500 PF10431 C-terminal, D2-small domain, of ClpB protein RGE_RS12505 PF06996 RGE_RS12505 RGE_RS12510 PF05947 RGE_RS12510 RGE_RS12515 PF04965 Gene 25-like lysozyme RGE_RS12520 PF05638 Protein of unknown function (DUF796) RGE_RS12525 PF05943 RGE_RS12525 RGE_RS12530 PF05591 RGE_RS12530 RGE_RS12540 PF12790 Type VI secretion lipoprotein RGE_RS12545 PF05936 RGE_RS12545 RGE_RS12550 PF09850 Uncharacterized protein conserved in bacteria (DUF2077) RGE_RS12555 PF05954 Phage late control gene D protein (GPD) RGE_RS12555 PF10106 RGE_RS12555 RGE_RS12555 PF13296 RGE_RS12555 RGE_RS12575 PF06812 RGE_RS12575 RGE_RS12580 PF00691 OmpA family RGE_RS12580 PF04972 BON domain RGE_RS12585 PF09867 Uncharacterized protein conserved in bacteria (DUF2094) RGE_RS12590 PF06744 RGE_RS12590 RGE_RS12590 PF06761 RGE_RS12590 RGE_RS12590 PF14331 RGE_RS12590 RGE_RS12600 PF05488 PAAR motif RGE_RS12605 PF13539 D-alanyl-D-alanine carboxypeptidase RGE_RS12610 PF05954 Phage late control gene D protein (GPD) RGE_RS12610 PF10106 RGE_RS12610 RGE_RS12610 PF13296 RGE_RS12610 RGE_RS12615 PF11678 RGE_RS12615 RGE_RS12625 PF11678 RGE_RS12625 RGE_RS12635 PF00589 Phage integrase family RGE_RS12650 PF06114 Domain of unknown function (DUF955) RGE_RS12650 PF13560 Helix-turn-helix domain RGE_RS12665 PF12796 Ankyrin repeats (3 copies) RGE_RS12665 PF13857 Ankyrin repeats (many copies) RGE_RS12670 PF01026 TatD related DNase RGE_RS12675 PF07238 PilZ domain RGE_RS12680 PF13177 DNA polymerase III, delta subunit RGE_RS12685 PF02223 Thymidylate kinase RGE_RS12690 PF02618 YceG-like family RGE_RS12695 PF01571 Aminomethyltransferase folate-binding domain RGE_RS12695 PF08669 Glycine cleavage T-protein C-terminal barrel domain RGE_RS12700 PF16290 RGE_RS12700 RGE_RS12705 PF03061 Thioesterase superfamily RGE_RS12705 PF13673 Acetyltransferase (GNAT) domain RGE_RS12710 PF07859 alpha/beta hydrolase fold RGE_RS12715 PF00465 Iron-containing alcohol dehydrogenase RGE_RS12720 PF00056 lactate/malate dehydrogenase, NAD binding domain RGE_RS12720 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain RGE_RS12725 PF00463 Isocitrate lyase family RGE_RS12730 PF00117 Glutamine amidotransferase class-I RGE_RS12735 PF00491 Arginase family RGE_RS12740 PF01814 Hemerythrin HHE cation binding domain RGE_RS12745 PF01037 AsnC family RGE_RS12745 PF13404 AsnC-type helix-turn-helix domain RGE_RS12750 PF00202 Aminotransferase class-III RGE_RS12755 PF01266 FAD dependent oxidoreductase RGE_RS12760 PF07722 Peptidase C26 RGE_RS12765 PF00120 Glutamine synthetase, catalytic domain RGE_RS12770 PF00202 Aminotransferase class-III RGE_RS12775 PF13416 Bacterial extracellular solute-binding protein RGE_RS12780 PF00005 ABC transporter RGE_RS12780 PF08402 TOBE domain RGE_RS12785 PF00528 Binding-protein-dependent transport system inner membrane component RGE_RS12790 PF00528 Binding-protein-dependent transport system inner membrane component RGE_RS12795 PF11336 RGE_RS12795 RGE_RS12800 PF00171 Aldehyde dehydrogenase family RGE_RS12805 PF00120 Glutamine synthetase, catalytic domain RGE_RS12810 PF00892 EamA-like transporter family RGE_RS12815 PF05433 RGE_RS12815 RGE_RS12820 PF00596 Class II Aldolase and Adducin N-terminal domain RGE_RS12825 PF01008 Initiation factor 2 subunit family RGE_RS12830 PF01048 Phosphorylase superfamily RGE_RS12835 PF01207 Dihydrouridine synthase (Dus) RGE_RS12840 PF00561 alpha/beta hydrolase fold RGE_RS12845 PF00561 alpha/beta hydrolase fold RGE_RS12850 PF02627 Carboxymuconolactone decarboxylase family RGE_RS12855 PF01068 ATP dependent DNA ligase domain RGE_RS12855 PF04679 ATP dependent DNA ligase C terminal region RGE_RS12855 PF13298 DNA polymerase Ligase (LigD) RGE_RS12860 PF11379 RGE_RS12860 RGE_RS12865 PF00326 Prolyl oligopeptidase family RGE_RS12870 PF07589 RGE_RS12870 RGE_RS12885 PF05170 RGE_RS12885 RGE_RS12900 PF01814 Hemerythrin HHE cation binding domain RGE_RS12905 PF01594 RGE_RS12905 RGE_RS12910 PF00571 CBS domain RGE_RS12915 PF07995 Glucose / Sorbosone dehydrogenase RGE_RS12930 PF13527 Acetyltransferase (GNAT) domain RGE_RS12935 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RGE_RS12935 PF03466 LysR substrate binding domain RGE_RS12945 PF01047 MarR family RGE_RS12975 PF00155 Aminotransferase class I and II RGE_RS12975 PF00392 Bacterial regulatory proteins, gntR family RGE_RS12980 PF11614 IG-like fold at C-terminal of FixG, putative oxidoreductase RGE_RS12980 PF12801 RGE_RS12980 RGE_RS12980 PF13746 4Fe-4S dicluster domain RGE_RS12985 PF00441 Acyl-CoA dehydrogenase, C-terminal domain RGE_RS12985 PF02770 Acyl-CoA dehydrogenase, middle domain RGE_RS12990 PF07848 PaaX-like protein RGE_RS12990 PF08223 PaaX-like protein C-terminal domain RGE_RS12995 PF00455 RGE_RS12995 RGE_RS12995 PF08220 DeoR-like helix-turn-helix domain RGE_RS13000 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily RGE_RS13005 PF01464 Transglycosylase SLT domain RGE_RS13005 PF08238 Sel1 repeat RGE_RS13010 PF01557 Fumarylacetoacetate (FAA) hydrolase family RGE_RS13010 PF09298 Fumarylacetoacetase N-terminal RGE_RS13015 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily RGE_RS13020 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain RGE_RS13020 PF13378 Enolase C-terminal domain-like RGE_RS13025 PF07755 Protein of unknown function (DUF1611) RGE_RS13030 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain RGE_RS13030 PF00672 HAMP domain RGE_RS13030 PF12729 RGE_RS13030 RGE_RS13035 PF00593 TonB dependent receptor RGE_RS13035 PF07715 TonB-dependent Receptor Plug Domain RGE_RS13040 PF07589 RGE_RS13040 RGE_RS13050 PF02824 TGS domain RGE_RS13050 PF04607 Region found in RelA / SpoT proteins RGE_RS13050 PF13291 ACT domain RGE_RS13050 PF13328 HD domain RGE_RS13055 PF12697 Alpha/beta hydrolase family RGE_RS13060 PF13561 Enoyl-(Acyl carrier protein) reductase RGE_RS13065 PF04402 Protein of unknown function (DUF541) RGE_RS13070 PF00072 Response regulator receiver domain RGE_RS13070 PF00486 Transcriptional regulatory protein, C terminal RGE_RS13075 PF00512 His Kinase A (phospho-acceptor) domain RGE_RS13075 PF00672 HAMP domain RGE_RS13075 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RGE_RS13075 PF16524 RGE_RS13075 RGE_RS13080 PF02542 YgbB family RGE_RS13085 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase RGE_RS13090 PF00270 DEAD/DEAH box helicase RGE_RS13090 PF00271 Helicase conserved C-terminal domain RGE_RS13090 PF02559 CarD-like/TRCF domain RGE_RS13090 PF03461 TRCF domain RGE_RS13095 PF12710 haloacid dehalogenase-like hydrolase RGE_RS13100 PF00291 Pyridoxal-phosphate dependent enzyme RGE_RS13110 PF00270 DEAD/DEAH box helicase RGE_RS13110 PF00271 Helicase conserved C-terminal domain RGE_RS13110 PF04408 Helicase associated domain (HA2) RGE_RS13110 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold RGE_RS13110 PF11898 RGE_RS13110 RGE_RS13115 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily RGE_RS13120 PF00583 Acetyltransferase (GNAT) family RGE_RS13120 PF00696 Amino acid kinase family RGE_RS13125 PF04362 Bacterial Fe(2+) trafficking RGE_RS13130 PF13416 Bacterial extracellular solute-binding protein RGE_RS13135 PF00816 H-NS histone family RGE_RS13140 PF00563 EAL domain RGE_RS13140 PF00989 PAS fold RGE_RS13140 PF00990 GGDEF domain RGE_RS13140 PF08447 PAS fold RGE_RS13145 PF01807 CHC2 zinc finger RGE_RS13145 PF08275 DNA primase catalytic core, N-terminal domain RGE_RS13145 PF10410 DnaB-helicase binding domain of primase RGE_RS13145 PF13662 Toprim domain RGE_RS13150 PF00140 Sigma-70 factor, region 1 RGE_RS13150 PF03979 Sigma-70 factor, region 1 RGE_RS13150 PF04539 Sigma-70 region 3 RGE_RS13150 PF04542 Sigma-70 region 2 RGE_RS13150 PF04545 Sigma-70, region 4 RGE_RS13150 PF04546 Sigma-70, non-essential region RGE_RS13155 PF00211 Adenylate and Guanylate cyclase catalytic domain RGE_RS13155 PF00498 FHA domain RGE_RS13160 PF00072 Response regulator receiver domain RGE_RS13165 PF00762 Ferrochelatase RGE_RS13170 PF01479 S4 domain RGE_RS13175 PF01025 GrpE RGE_RS13180 PF00012 Hsp70 protein RGE_RS13185 PF00226 DnaJ domain RGE_RS13185 PF00684 DnaJ central domain RGE_RS13185 PF01556 DnaJ C terminal domain RGE_RS13190 PF00072 Response regulator receiver domain RGE_RS13190 PF13432 Tetratricopeptide repeat RGE_RS13195 PF04055 Radical SAM superfamily RGE_RS13200 PF00772 DnaB-like helicase N terminal domain RGE_RS13200 PF03796 DnaB-like helicase C terminal domain RGE_RS13205 PF01281 Ribosomal protein L9, N-terminal domain RGE_RS13205 PF03948 Ribosomal protein L9, C-terminal domain RGE_RS13210 PF01084 Ribosomal protein S18 RGE_RS13220 PF01250 Ribosomal protein S6 RGE_RS13225 PF00474 Sodium:solute symporter family RGE_RS13230 PF00391 PEP-utilising enzyme, mobile domain RGE_RS13230 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain RGE_RS13230 PF02896 PEP-utilising enzyme, TIM barrel domain RGE_RS13235 PF03618 RGE_RS13235 RGE_RS13240 PF00588 SpoU rRNA Methylase family RGE_RS13245 PF01351 Ribonuclease HII RGE_RS13250 PF02684 RGE_RS13250 RGE_RS13255 PF00132 Bacterial transferase hexapeptide (six repeats) RGE_RS13255 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 RGE_RS13260 PF07977 FabA-like domain RGE_RS13265 PF00132 Bacterial transferase hexapeptide (six repeats) RGE_RS13265 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD RGE_RS13270 PF03938 Outer membrane protein (OmpH-like) RGE_RS13275 PF01103 Surface antigen RGE_RS13275 PF07244 Surface antigen variable number repeat RGE_RS13280 PF02163 Peptidase family M50 RGE_RS13280 PF13180 PDZ domain RGE_RS13285 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase RGE_RS13285 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal RGE_RS13285 PF13288 DXP reductoisomerase C-terminal domain RGE_RS13290 PF01148 Cytidylyltransferase family RGE_RS13295 PF01255 Putative undecaprenyl diphosphate synthase RGE_RS13300 PF01765 Ribosome recycling factor RGE_RS13305 PF00696 Amino acid kinase family RGE_RS13310 PF00889 Elongation factor TS RGE_RS13315 PF00318 Ribosomal protein S2 RGE_RS13320 PF01425 Amidase RGE_RS13325 PF01266 FAD dependent oxidoreductase RGE_RS13330 PF01256 Carbohydrate kinase RGE_RS13330 PF03853 YjeF-related protein N-terminus RGE_RS13335 PF00575 S1 RNA binding domain RGE_RS13335 PF00773 RNB domain RGE_RS13335 PF08206 Ribonuclease B OB domain RGE_RS13345 PF00156 Phosphoribosyl transferase domain RGE_RS13350 PF00709 Adenylosuccinate synthetase RGE_RS13355 PF13393 Histidyl-tRNA synthetase RGE_RS13360 PF09838 RGE_RS13360 RGE_RS13365 PF01145 SPFH domain / Band 7 family RGE_RS13370 PF01145 SPFH domain / Band 7 family RGE_RS13370 PF12221 RGE_RS13370 RGE_RS13375 PF01926 50S ribosome-binding GTPase RGE_RS13375 PF13167 RGE_RS13375 RGE_RS13375 PF16360 RGE_RS13375 RGE_RS13385 PF01926 50S ribosome-binding GTPase RGE_RS13385 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal RGE_RS13390 PF13360 PQQ-like domain RGE_RS13395 PF09976 Tetratricopeptide repeat RGE_RS13400 PF03129 Anticodon binding domain RGE_RS13400 PF13393 Histidyl-tRNA synthetase RGE_RS13405 PF04551 GcpE protein RGE_RS13410 PF13413 Helix-turn-helix domain RGE_RS13410 PF13464 RGE_RS13410 RGE_RS13415 PF13432 Tetratricopeptide repeat RGE_RS13415 PF14559 Tetratricopeptide repeat RGE_RS13420 PF04055 Radical SAM superfamily RGE_RS13425 PF00334 Nucleoside diphosphate kinase RGE_RS13430 PF00849 RNA pseudouridylate synthase RGE_RS13430 PF01479 S4 domain RGE_RS13435 PF04079 Putative transcriptional regulators (Ypuh-like) RGE_RS13440 PF00849 RNA pseudouridylate synthase RGE_RS13440 PF01479 S4 domain RGE_RS13445 PF13525 Outer membrane lipoprotein RGE_RS13450 PF13307 Helicase C-terminal domain RGE_RS13455 PF04325 Protein of unknown function (DUF465) RGE_RS13460 PF13672 Protein phosphatase 2C RGE_RS13470 PF03969 AFG1-like ATPase RGE_RS13485 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain RGE_RS13485 PF07992 Pyridine nucleotide-disulphide oxidoreductase RGE_RS13490 PF04024 RGE_RS13490 RGE_RS13490 PF09851 RGE_RS13490 RGE_RS13495 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) RGE_RS13495 PF00364 Biotin-requiring enzyme RGE_RS13495 PF02817 e3 binding domain RGE_RS13500 PF00676 Dehydrogenase E1 component RGE_RS13500 PF02779 Transketolase, pyrimidine binding domain RGE_RS13500 PF16078 RGE_RS13500 RGE_RS13500 PF16870 RGE_RS13500 RGE_RS13510 PF03060 Nitronate monooxygenase RGE_RS13515 PF00441 Acyl-CoA dehydrogenase, C-terminal domain RGE_RS13515 PF02770 Acyl-CoA dehydrogenase, middle domain RGE_RS13515 PF02771 Acyl-CoA dehydrogenase, N-terminal domain RGE_RS13515 PF12418 RGE_RS13515 RGE_RS13515 PF12806 RGE_RS13515 RGE_RS13520 PF00766 Electron transfer flavoprotein FAD-binding domain RGE_RS13520 PF01012 Electron transfer flavoprotein domain RGE_RS13525 PF01012 Electron transfer flavoprotein domain RGE_RS13530 PF07690 Major Facilitator Superfamily RGE_RS13535 PF00155 Aminotransferase class I and II RGE_RS13535 PF00392 Bacterial regulatory proteins, gntR family RGE_RS13540 PF16576 RGE_RS13540 RGE_RS13545 PF00005 ABC transporter RGE_RS13545 PF02687 RGE_RS13545 RGE_RS13545 PF12704 MacB-like periplasmic core domain RGE_RS13550 PF02321 Outer membrane efflux protein RGE_RS13555 PF04972 BON domain RGE_RS13560 PF11828 RGE_RS13560 RGE_RS13565 PF05650 RGE_RS13565 RGE_RS13570 PF00691 OmpA family RGE_RS13575 PF11445 RGE_RS13575 RGE_RS13595 PF00004 ATPase family associated with various cellular activities (AAA) RGE_RS13595 PF02190 ATP-dependent protease La (LON) domain RGE_RS13595 PF05362 Lon protease (S16) C-terminal proteolytic domain RGE_RS13600 PF06689 ClpX C4-type zinc finger RGE_RS13600 PF07724 AAA domain (Cdc48 subfamily) RGE_RS13600 PF10431 C-terminal, D2-small domain, of ClpB protein RGE_RS13605 PF00574 Clp protease RGE_RS13610 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase RGE_RS13610 PF05697 Bacterial trigger factor protein (TF) RGE_RS13610 PF05698 Bacterial trigger factor protein (TF) C-terminus RGE_RS13620 PF00873 AcrB/AcrD/AcrF family RGE_RS13625 PF16576 RGE_RS13625 RGE_RS13630 PF00494 Squalene/phytoene synthase RGE_RS13635 PF00494 Squalene/phytoene synthase RGE_RS13640 PF01593 Flavin containing amine oxidoreductase RGE_RS13645 PF01614 Bacterial transcriptional regulator RGE_RS13645 PF09339 IclR helix-turn-helix domain RGE_RS13650 PF00768 D-alanyl-D-alanine carboxypeptidase RGE_RS13655 PF00682 HMGL-like RGE_RS13655 PF08502 LeuA allosteric (dimerisation) domain RGE_RS13660 PF01066 CDP-alcohol phosphatidyltransferase RGE_RS13665 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain RGE_RS13665 PF07991 Acetohydroxy acid isomeroreductase, catalytic domain RGE_RS13670 PF10369 Small subunit of acetolactate synthase RGE_RS13670 PF13710 ACT domain RGE_RS13675 PF00205 Thiamine pyrophosphate enzyme, central domain RGE_RS13675 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain RGE_RS13675 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain RGE_RS13680 PF04542 Sigma-70 region 2 RGE_RS13680 PF08281 Sigma-70, region 4 RGE_RS13685 PF12279 RGE_RS13685 RGE_RS13690 PF11304 RGE_RS13690 RGE_RS13695 PF06271 RGE_RS13695 RGE_RS13700 PF01219 Prokaryotic diacylglycerol kinase RGE_RS13705 PF03641 Possible lysine decarboxylase RGE_RS13710 PF00543 Nitrogen regulatory protein P-II RGE_RS13715 PF00795 Carbon-nitrogen hydrolase RGE_RS13715 PF02540 NAD synthase RGE_RS13720 PF04339 RGE_RS13720 RGE_RS13725 PF00719 Inorganic pyrophosphatase RGE_RS13730 PF03030 Inorganic H+ pyrophosphatase RGE_RS13740 PF03109 RGE_RS13740 RGE_RS13745 PF00892 EamA-like transporter family RGE_RS13750 PF00009 Elongation factor Tu GTP binding domain RGE_RS13750 PF00679 Elongation factor G C-terminus RGE_RS13750 PF03144 Elongation factor Tu domain 2 RGE_RS13755 PF01509 TruB family pseudouridylate synthase (N terminal domain) RGE_RS13755 PF09157 Pseudouridine synthase II TruB, C-terminal RGE_RS13755 PF16198 RGE_RS13755 RGE_RS13760 PF02033 Ribosome-binding factor A RGE_RS13765 PF00009 Elongation factor Tu GTP binding domain RGE_RS13765 PF04760 Translation initiation factor IF-2, N-terminal region RGE_RS13765 PF08364 RGE_RS13765 RGE_RS13765 PF11987 Translation-initiation factor 2 RGE_RS13770 PF00575 S1 RNA binding domain RGE_RS13770 PF08529 NusA N-terminal domain RGE_RS13770 PF13184 NusA-like KH domain RGE_RS13770 PF14520 Helix-hairpin-helix domain RGE_RS13775 PF02576 Uncharacterised BCR, YhbC family COG0779 RGE_RS13780 PF13561 Enoyl-(Acyl carrier protein) reductase RGE_RS13785 PF01276 Orn/Lys/Arg decarboxylase, major domain RGE_RS13785 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain RGE_RS13785 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain RGE_RS13805 PF02195 ParB-like nuclease domain RGE_RS13815 PF00239 Resolvase, N terminal domain RGE_RS13815 PF02796 Helix-turn-helix domain of resolvase RGE_RS13830 PF00534 Glycosyl transferases group 1 RGE_RS13835 PF01522 Polysaccharide deacetylase RGE_RS13840 PF00892 EamA-like transporter family RGE_RS13845 PF02311 AraC-like ligand binding domain RGE_RS13845 PF12833 Helix-turn-helix domain RGE_RS13850 PF13515 RGE_RS13850 RGE_RS13860 PF04055 Radical SAM superfamily RGE_RS13860 PF16199 RGE_RS13860 RGE_RS13865 PF03881 Fructosamine kinase RGE_RS13875 PF01594 RGE_RS13875 RGE_RS13880 PF02405 RGE_RS13880 RGE_RS13885 PF00005 ABC transporter RGE_RS13890 PF02470 RGE_RS13890 RGE_RS13895 PF03886 Protein of unknown function (DUF330) RGE_RS13900 PF16242 RGE_RS13900 RGE_RS13910 PF07043 RGE_RS13910 RGE_RS13915 PF00206 Lyase RGE_RS13915 PF10415 Fumarase C C-terminus RGE_RS13925 PF13091 PLD-like domain RGE_RS13940 PF04972 BON domain RGE_RS13945 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RGE_RS13945 PF05227 CHASE3 domain RGE_RS13945 PF07730 Histidine kinase RGE_RS13950 PF00072 Response regulator receiver domain RGE_RS13965 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase RGE_RS13970 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg RGE_RS13970 PF17147 RGE_RS13970 RGE_RS13975 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain RGE_RS13980 PF00037 4Fe-4S binding domain RGE_RS13980 PF07992 Pyridine nucleotide-disulphide oxidoreductase RGE_RS13980 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster RGE_RS13985 PF13676 TIR domain RGE_RS13990 PF00989 PAS fold RGE_RS13990 PF08448 PAS fold RGE_RS13995 PF12770 RGE_RS13995 RGE_RS14000 PF00556 Antenna complex alpha/beta subunit RGE_RS14005 PF00556 Antenna complex alpha/beta subunit RGE_RS14010 PF03209 RGE_RS14010 RGE_RS14015 PF00781 Diacylglycerol kinase catalytic domain RGE_RS14020 PF00149 Calcineurin-like phosphoesterase RGE_RS14025 PF00672 HAMP domain RGE_RS14025 PF00990 GGDEF domain RGE_RS14025 PF13426 PAS domain RGE_RS14035 PF05067 Manganese containing catalase RGE_RS14040 PF02535 RGE_RS14040 RGE_RS14045 PF00043 Glutathione S-transferase, C-terminal domain RGE_RS14045 PF02798 Glutathione S-transferase, N-terminal domain RGE_RS14050 PF00072 Response regulator receiver domain RGE_RS14050 PF00196 Bacterial regulatory proteins, luxR family RGE_RS14055 PF00512 His Kinase A (phospho-acceptor) domain RGE_RS14055 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RGE_RS14055 PF12974 ABC transporter, phosphonate, periplasmic substrate-binding protein RGE_RS14060 PF00034 Cytochrome c RGE_RS14060 PF13442 Cytochrome C oxidase, cbb3-type, subunit III RGE_RS14065 PF01177 Asp/Glu/Hydantoin racemase RGE_RS14070 PF02588 RGE_RS14070 RGE_RS14080 PF00155 Aminotransferase class I and II RGE_RS14085 PF03186 RGE_RS14085 RGE_RS14090 PF01497 Periplasmic binding protein RGE_RS14095 PF00034 Cytochrome c RGE_RS14100 PF07992 Pyridine nucleotide-disulphide oxidoreductase RGE_RS14100 PF09242 Flavocytochrome c sulphide dehydrogenase, flavin-binding RGE_RS14105 PF13458 Periplasmic binding protein RGE_RS14110 PF08770 Sulphur oxidation protein SoxZ RGE_RS14115 PF13501 Sulfur oxidation protein SoxY RGE_RS14120 PF02558 Ketopantoate reductase PanE/ApbA RGE_RS14120 PF08546 Ketopantoate reductase PanE/ApbA C terminal RGE_RS14125 PF08279 HTH domain RGE_RS14125 PF13280 RGE_RS14125 RGE_RS14130 PF01268 Formate--tetrahydrofolate ligase RGE_RS14135 PF03695 Uncharacterised protein family (UPF0149) RGE_RS14140 PF00072 Response regulator receiver domain RGE_RS14140 PF00512 His Kinase A (phospho-acceptor) domain RGE_RS14140 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RGE_RS14140 PF13426 PAS domain RGE_RS14150 PF00534 Glycosyl transferases group 1 RGE_RS14150 PF08323 Starch synthase catalytic domain RGE_RS14155 PF00483 Nucleotidyl transferase RGE_RS14160 PF00343 Carbohydrate phosphorylase RGE_RS14165 PF00128 Alpha amylase, catalytic domain RGE_RS14165 PF02806 Alpha amylase, C-terminal all-beta domain RGE_RS14165 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) RGE_RS14170 PF00128 Alpha amylase, catalytic domain RGE_RS14170 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) RGE_RS14175 PF02446 4-alpha-glucanotransferase RGE_RS14180 PF13458 Periplasmic binding protein RGE_RS14185 PF04364 DNA polymerase III chi subunit, HolC RGE_RS14190 PF00883 Cytosol aminopeptidase family, catalytic domain RGE_RS14190 PF02789 Cytosol aminopeptidase family, N-terminal domain RGE_RS14195 PF03739 RGE_RS14195 RGE_RS14200 PF03739 RGE_RS14200 RGE_RS14205 PF01903 CbiX RGE_RS14210 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RGE_RS14210 PF03466 LysR substrate binding domain RGE_RS14215 PF00155 Aminotransferase class I and II RGE_RS14225 PF00027 Cyclic nucleotide-binding domain RGE_RS14225 PF13545 Crp-like helix-turn-helix domain RGE_RS14230 PF01636 Phosphotransferase enzyme family RGE_RS14235 PF00441 Acyl-CoA dehydrogenase, C-terminal domain RGE_RS14235 PF02770 Acyl-CoA dehydrogenase, middle domain RGE_RS14235 PF02771 Acyl-CoA dehydrogenase, N-terminal domain RGE_RS14245 PF00043 Glutathione S-transferase, C-terminal domain RGE_RS14245 PF02798 Glutathione S-transferase, N-terminal domain RGE_RS14250 PF03180 NLPA lipoprotein RGE_RS14255 PF00460 Flagella basal body rod protein RGE_RS14260 PF00593 TonB dependent receptor RGE_RS14260 PF07715 TonB-dependent Receptor Plug Domain RGE_RS14265 PF03824 RGE_RS14265 RGE_RS14270 PF01402 Ribbon-helix-helix protein, copG family RGE_RS14270 PF08753 NikR C terminal nickel binding domain RGE_RS14280 PF06983 3-demethylubiquinone-9 3-methyltransferase RGE_RS14290 PF00313 'Cold-shock' DNA-binding domain RGE_RS14295 PF13365 Trypsin-like peptidase domain RGE_RS14300 PF00593 TonB dependent receptor RGE_RS14300 PF07715 TonB-dependent Receptor Plug Domain RGE_RS14305 PF11162 RGE_RS14305 RGE_RS14310 PF04542 Sigma-70 region 2 RGE_RS14310 PF08281 Sigma-70, region 4 RGE_RS14315 PF06983 3-demethylubiquinone-9 3-methyltransferase RGE_RS14320 PF08327 Activator of Hsp90 ATPase homolog 1-like protein RGE_RS14325 PF03795 YCII-related domain RGE_RS14340 PF00989 PAS fold RGE_RS14340 PF00990 GGDEF domain RGE_RS14340 PF13185 GAF domain RGE_RS14345 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RGE_RS14345 PF03466 LysR substrate binding domain RGE_RS14350 PF00890 FAD binding domain RGE_RS14360 PF03401 Tripartite tricarboxylate transporter family receptor RGE_RS14365 PF02417 RGE_RS14365 RGE_RS14370 PF02417 RGE_RS14370 RGE_RS14375 PF02321 Outer membrane efflux protein RGE_RS14380 PF00873 AcrB/AcrD/AcrF family RGE_RS14385 PF16576 RGE_RS14385 RGE_RS14390 PF00072 Response regulator receiver domain RGE_RS14390 PF00486 Transcriptional regulatory protein, C terminal RGE_RS14395 PF00512 His Kinase A (phospho-acceptor) domain RGE_RS14395 PF00672 HAMP domain RGE_RS14395 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RGE_RS14400 PF00909 Ammonium Transporter Family RGE_RS14410 PF02321 Outer membrane efflux protein RGE_RS14420 PF16576 RGE_RS14420 RGE_RS14425 PF00873 AcrB/AcrD/AcrF family RGE_RS14435 PF13561 Enoyl-(Acyl carrier protein) reductase RGE_RS14440 PF13561 Enoyl-(Acyl carrier protein) reductase RGE_RS14445 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RGE_RS14445 PF03466 LysR substrate binding domain RGE_RS14450 PF00999 Sodium/hydrogen exchanger family RGE_RS14455 PF02678 Pirin RGE_RS14455 PF05726 Pirin C-terminal cupin domain RGE_RS14460 PF03795 YCII-related domain RGE_RS14465 PF04542 Sigma-70 region 2 RGE_RS14465 PF08281 Sigma-70, region 4 RGE_RS14470 PF00753 Metallo-beta-lactamase superfamily RGE_RS14475 PF08770 Sulphur oxidation protein SoxZ RGE_RS14475 PF13501 Sulfur oxidation protein SoxY RGE_RS14480 PF00873 AcrB/AcrD/AcrF family RGE_RS14485 PF16576 RGE_RS14485 RGE_RS14490 PF02321 Outer membrane efflux protein RGE_RS14495 PF07690 Major Facilitator Superfamily RGE_RS14500 PF00440 Bacterial regulatory proteins, tetR family RGE_RS14500 PF02909 Tetracyclin repressor, C-terminal all-alpha domain RGE_RS14510 PF13561 Enoyl-(Acyl carrier protein) reductase RGE_RS14515 PF13561 Enoyl-(Acyl carrier protein) reductase RGE_RS14520 PF00285 Citrate synthase RGE_RS14525 PF00501 AMP-binding enzyme RGE_RS14525 PF13193 AMP-binding enzyme C-terminal domain RGE_RS14530 PF03401 Tripartite tricarboxylate transporter family receptor RGE_RS14535 PF01614 Bacterial transcriptional regulator RGE_RS14535 PF09339 IclR helix-turn-helix domain RGE_RS14545 PF05598 RGE_RS14545 RGE_RS14550 PF06666 RGE_RS14550 RGE_RS14570 PF01396 RGE_RS14570 RGE_RS14570 PF04471 Restriction endonuclease RGE_RS14575 PF12643 RGE_RS14575 RGE_RS14595 PF02195 ParB-like nuclease domain RGE_RS14595 PF08535 KorB domain RGE_RS14600 PF05930 Prophage CP4-57 regulatory protein (AlpA) RGE_RS14605 PF07883 Cupin domain RGE_RS14610 PF00589 Phage integrase family RGE_RS14610 PF13356 Domain of unknown function (DUF4102) RGE_RS14620 PF01037 AsnC family RGE_RS14620 PF13412 Winged helix-turn-helix DNA-binding RGE_RS14625 PF01177 Asp/Glu/Hydantoin racemase RGE_RS14630 PF12625 RGE_RS14630 RGE_RS14630 PF12833 Helix-turn-helix domain RGE_RS14635 PF00990 GGDEF domain RGE_RS14640 PF01551 Peptidase family M23 RGE_RS14645 PF00593 TonB dependent receptor RGE_RS14645 PF07715 TonB-dependent Receptor Plug Domain RGE_RS14650 PF02333 Phytase RGE_RS14655 PF00072 Response regulator receiver domain RGE_RS14655 PF00486 Transcriptional regulatory protein, C terminal RGE_RS14660 PF00512 His Kinase A (phospho-acceptor) domain RGE_RS14660 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RGE_RS14660 PF08521 RGE_RS14660 RGE_RS14670 PF04828 Glutathione-dependent formaldehyde-activating enzyme RGE_RS14680 PF07927 YcfA-like protein RGE_RS14700 PF00106 short chain dehydrogenase RGE_RS14705 PF14518 Iron-containing redox enzyme RGE_RS14710 PF00501 AMP-binding enzyme RGE_RS14715 PF12261 RGE_RS14715 RGE_RS14720 PF00501 AMP-binding enzyme RGE_RS14725 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain RGE_RS14725 PF08447 PAS fold RGE_RS14730 PF12244 RGE_RS14730 RGE_RS14735 PF05954 Phage late control gene D protein (GPD) RGE_RS14735 PF10106 RGE_RS14735 RGE_RS14735 PF13296 RGE_RS14735 RGE_RS14740 PF09850 Uncharacterized protein conserved in bacteria (DUF2077) RGE_RS14745 PF05936 RGE_RS14745 RGE_RS14750 PF12790 Type VI secretion lipoprotein RGE_RS14755 PF13428 Tetratricopeptide repeat RGE_RS14760 PF05591 RGE_RS14760 RGE_RS14765 PF05943 RGE_RS14765 RGE_RS14770 PF05638 Protein of unknown function (DUF796) RGE_RS14780 PF05947 RGE_RS14780 RGE_RS14785 PF06996 RGE_RS14785 RGE_RS14790 PF05954 Phage late control gene D protein (GPD) RGE_RS14790 PF10106 RGE_RS14790 RGE_RS14790 PF13296 RGE_RS14790 RGE_RS14795 PF13899 Thioredoxin-like RGE_RS14800 PF11804 RGE_RS14800 RGE_RS14805 PF03929 RGE_RS14805 RGE_RS14815 PF00593 TonB dependent receptor RGE_RS14815 PF07715 TonB-dependent Receptor Plug Domain RGE_RS14820 PF04773 FecR protein RGE_RS14820 PF16220 RGE_RS14820 RGE_RS14825 PF04542 Sigma-70 region 2 RGE_RS14825 PF08281 Sigma-70, region 4 RGE_RS14830 PF00593 TonB dependent receptor RGE_RS14830 PF07660 Secretin and TonB N terminus short domain RGE_RS14830 PF07715 TonB-dependent Receptor Plug Domain RGE_RS14835 PF04773 FecR protein RGE_RS14835 PF16220 RGE_RS14835 RGE_RS14840 PF04542 Sigma-70 region 2 RGE_RS14840 PF08281 Sigma-70, region 4 RGE_RS14845 PF00593 TonB dependent receptor RGE_RS14845 PF07660 Secretin and TonB N terminus short domain RGE_RS14845 PF07715 TonB-dependent Receptor Plug Domain RGE_RS14850 PF04773 FecR protein RGE_RS14850 PF16220 RGE_RS14850 RGE_RS14855 PF04542 Sigma-70 region 2 RGE_RS14855 PF08281 Sigma-70, region 4 RGE_RS14860 PF00593 TonB dependent receptor RGE_RS14860 PF07715 TonB-dependent Receptor Plug Domain RGE_RS14865 PF04773 FecR protein RGE_RS14865 PF16220 RGE_RS14865 RGE_RS14870 PF04542 Sigma-70 region 2 RGE_RS14870 PF08281 Sigma-70, region 4 RGE_RS14880 PF01436 NHL repeat RGE_RS14885 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain RGE_RS14885 PF00672 HAMP domain RGE_RS14885 PF12729 RGE_RS14885 RGE_RS14905 PF00122 E1-E2 ATPase RGE_RS14905 PF00702 haloacid dehalogenase-like hydrolase RGE_RS14915 PF04542 Sigma-70 region 2 RGE_RS14915 PF08281 Sigma-70, region 4 RGE_RS14920 PF04773 FecR protein RGE_RS14920 PF16220 RGE_RS14920 RGE_RS14925 PF00593 TonB dependent receptor RGE_RS14925 PF07660 Secretin and TonB N terminus short domain RGE_RS14925 PF07715 TonB-dependent Receptor Plug Domain RGE_RS14930 PF00756 Putative esterase RGE_RS14945 PF03929 RGE_RS14945 RGE_RS14955 PF02321 Outer membrane efflux protein RGE_RS14960 PF01594 RGE_RS14960 RGE_RS14970 PF01124 MAPEG family RGE_RS14975 PF01168 Alanine racemase, N-terminal domain RGE_RS14980 PF03594 RGE_RS14980 RGE_RS14985 PF00155 Aminotransferase class I and II RGE_RS14985 PF00392 Bacterial regulatory proteins, gntR family RGE_RS14990 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain RGE_RS14990 PF00672 HAMP domain RGE_RS14990 PF12729 RGE_RS14990 RGE_RS14995 PF01638 HxlR-like helix-turn-helix RGE_RS15005 PF00155 Aminotransferase class I and II RGE_RS15010 PF01565 FAD binding domain RGE_RS15010 PF02913 FAD linked oxidases, C-terminal domain RGE_RS15015 PF03180 NLPA lipoprotein RGE_RS15020 PF00005 ABC transporter RGE_RS15020 PF09383 NIL domain RGE_RS15025 PF00528 Binding-protein-dependent transport system inner membrane component RGE_RS15040 PF01989 Protein of unknown function DUF126 RGE_RS15045 PF04412 RGE_RS15045 RGE_RS15050 PF03401 Tripartite tricarboxylate transporter family receptor RGE_RS15055 PF13454 FAD-NAD(P)-binding RGE_RS15060 PF00117 Glutamine amidotransferase class-I RGE_RS15060 PF00958 GMP synthase C terminal domain RGE_RS15060 PF02540 NAD synthase RGE_RS15065 PF07690 Major Facilitator Superfamily RGE_RS15070 PF00478 IMP dehydrogenase / GMP reductase domain RGE_RS15070 PF00571 CBS domain RGE_RS15075 PF13511 RGE_RS15075 RGE_RS15080 PF03658 RnfH family Ubiquitin RGE_RS15085 PF03364 Polyketide cyclase / dehydrase and lipid transport RGE_RS15090 PF01668 SmpB protein RGE_RS15095 PF12681 Glyoxalase-like domain RGE_RS15100 PF12833 Helix-turn-helix domain RGE_RS15105 PF01053 Cys/Met metabolism PLP-dependent enzyme RGE_RS15110 PF00919 Uncharacterized protein family UPF0004 RGE_RS15110 PF04055 Radical SAM superfamily RGE_RS15115 PF05233 RGE_RS15115 RGE_RS15115 PF07879 RGE_RS15115 RGE_RS15120 PF00135 Carboxylesterase family RGE_RS15130 PF00561 alpha/beta hydrolase fold RGE_RS15135 PF01663 Type I phosphodiesterase / nucleotide pyrophosphatase RGE_RS15145 PF00109 Beta-ketoacyl synthase, N-terminal domain RGE_RS15145 PF00698 Acyl transferase domain RGE_RS15145 PF01648 4'-phosphopantetheinyl transferase superfamily RGE_RS15145 PF02801 Beta-ketoacyl synthase, C-terminal domain RGE_RS15145 PF14765 Polyketide synthase dehydratase RGE_RS15145 PF16197 RGE_RS15145 RGE_RS15150 PF00109 Beta-ketoacyl synthase, N-terminal domain RGE_RS15150 PF00550 Phosphopantetheine attachment site RGE_RS15150 PF00698 Acyl transferase domain RGE_RS15150 PF02801 Beta-ketoacyl synthase, C-terminal domain RGE_RS15150 PF03060 Nitronate monooxygenase RGE_RS15150 PF08659 KR domain RGE_RS15150 PF14765 Polyketide synthase dehydratase RGE_RS15150 PF16197 RGE_RS15150 RGE_RS15170 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain RGE_RS15170 PF00672 HAMP domain RGE_RS15170 PF12729 RGE_RS15170 RGE_RS15175 PF00529 HlyD family secretion protein RGE_RS15175 PF16576 RGE_RS15175 RGE_RS15180 PF02321 Outer membrane efflux protein RGE_RS15190 PF13469 Sulfotransferase family RGE_RS15195 PF00884 Sulfatase RGE_RS15205 PF00459 Inositol monophosphatase family RGE_RS15210 PF01507 Phosphoadenosine phosphosulfate reductase family RGE_RS15215 PF00009 Elongation factor Tu GTP binding domain RGE_RS15215 PF01583 Adenylylsulphate kinase RGE_RS15220 PF00578 AhpC/TSA family RGE_RS15220 PF10417 C-terminal domain of 1-Cys peroxiredoxin RGE_RS15225 PF07992 Pyridine nucleotide-disulphide oxidoreductase RGE_RS15225 PF13192 Thioredoxin domain RGE_RS15230 PF03631 RGE_RS15230 RGE_RS15235 PF00578 AhpC/TSA family RGE_RS15240 PF07759 RGE_RS15240 RGE_RS15245 PF01804 Penicillin amidase RGE_RS15255 PF00582 Universal stress protein family RGE_RS15260 PF07690 Major Facilitator Superfamily RGE_RS15265 PF13533 Biotin-lipoyl like RGE_RS15265 PF16576 RGE_RS15265 RGE_RS15270 PF02321 Outer membrane efflux protein RGE_RS15275 PF00440 Bacterial regulatory proteins, tetR family RGE_RS15275 PF14246 AefR-like transcriptional repressor, C-terminal region RGE_RS15280 PF00005 ABC transporter RGE_RS15280 PF09821 RGE_RS15280 RGE_RS15285 PF00528 Binding-protein-dependent transport system inner membrane component RGE_RS15295 PF09916 RGE_RS15295 RGE_RS15300 PF00702 haloacid dehalogenase-like hydrolase RGE_RS15310 PF00266 Aminotransferase class-V RGE_RS15315 PF00528 Binding-protein-dependent transport system inner membrane component RGE_RS15320 PF00005 ABC transporter RGE_RS15320 PF08402 TOBE domain RGE_RS15325 PF13343 Bacterial extracellular solute-binding protein RGE_RS15330 PF00392 Bacterial regulatory proteins, gntR family RGE_RS15330 PF07729 FCD domain RGE_RS15335 PF00202 Aminotransferase class-III RGE_RS15340 PF00563 EAL domain RGE_RS15340 PF00990 GGDEF domain RGE_RS15355 PF14282 RGE_RS15355 RGE_RS15370 PF00582 Universal stress protein family RGE_RS15375 PF05345 Putative Ig domain RGE_RS15385 PF00696 Amino acid kinase family RGE_RS15385 PF01842 ACT domain RGE_RS15385 PF13840 ACT domain RGE_RS15390 PF01171 PP-loop family RGE_RS15390 PF11734 TilS substrate C-terminal domain RGE_RS15395 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit RGE_RS15400 PF00730 HhH-GPD superfamily base excision DNA repair protein RGE_RS15405 PF01406 tRNA synthetases class I (C) catalytic domain RGE_RS15405 PF09190 DALR domain RGE_RS15410 PF14559 Tetratricopeptide repeat RGE_RS15415 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD RGE_RS15420 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD RGE_RS15425 PF12850 Calcineurin-like phosphoesterase superfamily domain RGE_RS15430 PF06167 Glucose-regulated metallo-peptidase M90 RGE_RS15435 PF00004 ATPase family associated with various cellular activities (AAA) RGE_RS15435 PF02861 Clp amino terminal domain RGE_RS15435 PF07724 AAA domain (Cdc48 subfamily) RGE_RS15435 PF10431 C-terminal, D2-small domain, of ClpB protein RGE_RS15440 PF02617 ATP-dependent Clp protease adaptor protein ClpS RGE_RS15445 PF00313 'Cold-shock' DNA-binding domain RGE_RS15455 PF00535 Glycosyl transferase family 2 RGE_RS15460 PF04794 YdjC-like protein RGE_RS15470 PF13231 RGE_RS15470 RGE_RS15480 PF00072 Response regulator receiver domain RGE_RS15480 PF00486 Transcriptional regulatory protein, C terminal RGE_RS15490 PF00180 Isocitrate/isopropylmalate dehydrogenase RGE_RS15495 PF13386 RGE_RS15495 RGE_RS15500 PF04055 Radical SAM superfamily RGE_RS15500 PF06969 HemN C-terminal domain RGE_RS15505 PF00027 Cyclic nucleotide-binding domain RGE_RS15505 PF13545 Crp-like helix-turn-helix domain RGE_RS15520 PF11614 IG-like fold at C-terminal of FixG, putative oxidoreductase RGE_RS15520 PF12801 RGE_RS15520 RGE_RS15520 PF13746 4Fe-4S dicluster domain RGE_RS15525 PF13442 Cytochrome C oxidase, cbb3-type, subunit III RGE_RS15525 PF14715 N-terminal domain of cytochrome oxidase-cbb3, FixP RGE_RS15530 PF05545 RGE_RS15530 RGE_RS15535 PF02433 Cytochrome C oxidase, mono-heme subunit/FixO RGE_RS15540 PF00115 Cytochrome C and Quinol oxidase polypeptide I RGE_RS15545 PF03597 RGE_RS15545 RGE_RS15550 PF00122 E1-E2 ATPase RGE_RS15550 PF00403 Heavy-metal-associated domain RGE_RS15550 PF00702 haloacid dehalogenase-like hydrolase RGE_RS15555 PF02643 Uncharacterized ACR, COG1430 RGE_RS15560 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain RGE_RS15560 PF02601 RGE_RS15560 RGE_RS15560 PF02777 Iron/manganese superoxide dismutases, C-terminal domain RGE_RS15560 PF13742 RGE_RS15560 RGE_RS15565 PF01618 RGE_RS15565 RGE_RS15570 PF02472 Biopolymer transport protein ExbD/TolR RGE_RS15575 PF02606 Tetraacyldisaccharide-1-P 4'-kinase RGE_RS15580 PF03966 Trm112p-like protein RGE_RS15585 PF02348 Cytidylyltransferase RGE_RS15590 PF00406 Adenylate kinase RGE_RS15590 PF05191 Adenylate kinase, active site lid RGE_RS15595 PF00106 short chain dehydrogenase RGE_RS15605 PF07715 TonB-dependent Receptor Plug Domain RGE_RS15610 PF00005 ABC transporter RGE_RS15610 PF08352 Oligopeptide/dipeptide transporter, C-terminal region RGE_RS15615 PF00528 Binding-protein-dependent transport system inner membrane component RGE_RS15620 PF00528 Binding-protein-dependent transport system inner membrane component RGE_RS15625 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle RGE_RS15630 PF02016 LD-carboxypeptidase RGE_RS15635 PF14437 RGE_RS15635 RGE_RS15645 PF05954 Phage late control gene D protein (GPD) RGE_RS15645 PF10106 RGE_RS15645 RGE_RS15645 PF13296 RGE_RS15645 RGE_RS15655 PF13539 D-alanyl-D-alanine carboxypeptidase RGE_RS15660 PF05488 PAAR motif RGE_RS15665 PF06744 RGE_RS15665 RGE_RS15665 PF06761 RGE_RS15665 RGE_RS15665 PF14331 RGE_RS15665 RGE_RS15670 PF09867 Uncharacterized protein conserved in bacteria (DUF2094) RGE_RS15675 PF00691 OmpA family RGE_RS15680 PF06812 RGE_RS15680 RGE_RS15685 PF02321 Outer membrane efflux protein RGE_RS15690 PF00873 AcrB/AcrD/AcrF family RGE_RS15695 PF16576 RGE_RS15695 RGE_RS15700 PF00440 Bacterial regulatory proteins, tetR family RGE_RS15700 PF08361 MAATS-type transcriptional repressor, C-terminal region RGE_RS15705 PF00999 Sodium/hydrogen exchanger family RGE_RS15705 PF02254 TrkA-N domain RGE_RS15710 PF00135 Carboxylesterase family RGE_RS15715 PF00534 Glycosyl transferases group 1 RGE_RS15715 PF13439 Glycosyltransferase Family 4 RGE_RS15720 PF06202 Amylo-alpha-1,6-glucosidase RGE_RS15720 PF14742 RGE_RS15720 RGE_RS15735 PF00149 Calcineurin-like phosphoesterase RGE_RS15735 PF02872 5'-nucleotidase, C-terminal domain RGE_RS15750 PF03737 Demethylmenaquinone methyltransferase RGE_RS15755 PF01037 AsnC family RGE_RS15755 PF13404 AsnC-type helix-turn-helix domain RGE_RS15760 PF00892 EamA-like transporter family RGE_RS15765 PF00205 Thiamine pyrophosphate enzyme, central domain RGE_RS15765 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain RGE_RS15765 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain RGE_RS15770 PF07690 Major Facilitator Superfamily RGE_RS15775 PF02311 AraC-like ligand binding domain RGE_RS15775 PF12833 Helix-turn-helix domain RGE_RS15780 PF02445 Quinolinate synthetase A protein RGE_RS15785 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain RGE_RS15785 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain RGE_RS15790 PF10719 RGE_RS15790 RGE_RS15795 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain RGE_RS15795 PF00672 HAMP domain RGE_RS15795 PF02743 Cache domain RGE_RS15800 PF00890 FAD binding domain RGE_RS15800 PF02910 Fumarate reductase flavoprotein C-term RGE_RS15805 PF03480 Bacterial extracellular solute-binding protein, family 7 RGE_RS15810 PF06808 RGE_RS15810 RGE_RS15815 PF04290 RGE_RS15815 RGE_RS15820 PF01202 Shikimate kinase RGE_RS15825 PF00356 Bacterial regulatory proteins, lacI family RGE_RS15825 PF13377 Periplasmic binding protein-like domain RGE_RS15835 PF00004 ATPase family associated with various cellular activities (AAA) RGE_RS15835 PF02861 Clp amino terminal domain RGE_RS15835 PF07724 AAA domain (Cdc48 subfamily) RGE_RS15835 PF10431 C-terminal, D2-small domain, of ClpB protein RGE_RS15840 PF01613 Flavin reductase like domain RGE_RS15845 PF02391 MoaE protein RGE_RS15850 PF02597 ThiS family RGE_RS15855 PF00994 Probable molybdopterin binding domain RGE_RS15855 PF03453 MoeA N-terminal region (domain I and II) RGE_RS15855 PF03454 MoeA C-terminal region (domain IV) RGE_RS15860 PF00291 Pyridoxal-phosphate dependent enzyme RGE_RS15860 PF14821 Threonine synthase N terminus RGE_RS15865 PF00742 Homoserine dehydrogenase RGE_RS15865 PF01842 ACT domain RGE_RS15865 PF03447 Homoserine dehydrogenase, NAD binding domain RGE_RS15870 PF00155 Aminotransferase class I and II RGE_RS15875 PF04430 Protein of unknown function (DUF498/DUF598) RGE_RS15880 PF00578 AhpC/TSA family RGE_RS15885 PF02562 PhoH-like protein RGE_RS15885 PF13638 PIN domain RGE_RS15890 PF01068 ATP dependent DNA ligase domain RGE_RS15890 PF14743 DNA ligase OB-like domain RGE_RS15895 PF00501 AMP-binding enzyme RGE_RS15895 PF13193 AMP-binding enzyme C-terminal domain RGE_RS15895 PF16177 RGE_RS15895 RGE_RS15900 PF00107 Zinc-binding dehydrogenase RGE_RS15905 PF00877 NlpC/P60 family RGE_RS15910 PF04055 Radical SAM superfamily RGE_RS15910 PF06463 Molybdenum Cofactor Synthesis C RGE_RS15910 PF13353 4Fe-4S single cluster domain RGE_RS15915 PF12804 MobA-like NTP transferase domain RGE_RS15920 PF00994 Probable molybdopterin binding domain RGE_RS15920 PF03453 MoeA N-terminal region (domain I and II) RGE_RS15920 PF03454 MoeA C-terminal region (domain IV) RGE_RS15925 PF00873 AcrB/AcrD/AcrF family RGE_RS15930 PF16576 RGE_RS15930 RGE_RS15935 PF00075 RNase H RGE_RS15940 PF08241 Methyltransferase domain RGE_RS15945 PF00753 Metallo-beta-lactamase superfamily RGE_RS15945 PF16123 RGE_RS15945 RGE_RS15950 PF01464 Transglycosylase SLT domain RGE_RS15950 PF01476 LysM domain RGE_RS15955 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain RGE_RS15955 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain RGE_RS15960 PF14681 Uracil phosphoribosyltransferase RGE_RS15965 PF00588 SpoU rRNA Methylase family RGE_RS15965 PF08032 RNA 2'-O ribose methyltransferase substrate binding RGE_RS15975 PF07786 RGE_RS15975 RGE_RS15980 PF08808 RGE_RS15980 RGE_RS15985 PF09722 RGE_RS15985 RGE_RS15990 PF13411 MerR HTH family regulatory protein RGE_RS15995 PF02036 SCP-2 sterol transfer family RGE_RS16000 PF13561 Enoyl-(Acyl carrier protein) reductase RGE_RS16005 PF01039 Carboxyl transferase domain RGE_RS16010 PF00441 Acyl-CoA dehydrogenase, C-terminal domain RGE_RS16010 PF02770 Acyl-CoA dehydrogenase, middle domain RGE_RS16010 PF02771 Acyl-CoA dehydrogenase, N-terminal domain RGE_RS16015 PF00378 Enoyl-CoA hydratase/isomerase family RGE_RS16020 PF00289 Carbamoyl-phosphate synthase L chain, N-terminal domain RGE_RS16020 PF00364 Biotin-requiring enzyme RGE_RS16020 PF02785 Biotin carboxylase C-terminal domain RGE_RS16020 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain RGE_RS16025 PF05853 Prokaryotic protein of unknown function (DUF849) RGE_RS16030 PF03061 Thioesterase superfamily RGE_RS16035 PF13180 PDZ domain RGE_RS16035 PF13365 Trypsin-like peptidase domain RGE_RS16045 PF00702 haloacid dehalogenase-like hydrolase RGE_RS16050 PF01136 RGE_RS16050 RGE_RS16050 PF12392 RGE_RS16050 RGE_RS16055 PF14534 Domain of unknown function (DUF4440) RGE_RS16060 PF02132 RecR protein RGE_RS16060 PF13662 Toprim domain RGE_RS16065 PF02575 YbaB/EbfC DNA-binding family RGE_RS16070 PF12169 DNA polymerase III subunits gamma and tau domain III RGE_RS16070 PF13177 DNA polymerase III, delta subunit RGE_RS16075 PF00586 AIR synthase related protein, N-terminal domain RGE_RS16075 PF02769 AIR synthase related protein, C-terminal domain RGE_RS16080 PF13505 Outer membrane protein beta-barrel domain RGE_RS16085 PF00072 Response regulator receiver domain RGE_RS16085 PF04397 LytTr DNA-binding domain RGE_RS16090 PF14501 GHKL domain RGE_RS16095 PF00149 Calcineurin-like phosphoesterase RGE_RS16100 PF00069 Protein kinase domain RGE_RS16100 PF08668 HDOD domain RGE_RS16105 PF08668 HDOD domain RGE_RS16110 PF00085 Thioredoxin RGE_RS16115 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain RGE_RS16115 PF07497 Rho termination factor, RNA-binding domain RGE_RS16115 PF07498 Rho termination factor, N-terminal domain RGE_RS16120 PF01197 Ribosomal protein L31 RGE_RS16130 PF00512 His Kinase A (phospho-acceptor) domain RGE_RS16130 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RGE_RS16130 PF11808 RGE_RS16130 RGE_RS16130 PF13188 PAS domain RGE_RS16135 PF00072 Response regulator receiver domain RGE_RS16135 PF00486 Transcriptional regulatory protein, C terminal RGE_RS16140 PF01895 PhoU domain RGE_RS16145 PF00005 ABC transporter RGE_RS16150 PF00528 Binding-protein-dependent transport system inner membrane component RGE_RS16155 PF00528 Binding-protein-dependent transport system inner membrane component RGE_RS16160 PF12849 PBP superfamily domain RGE_RS16165 PF02469 Fasciclin domain RGE_RS16170 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain RGE_RS16170 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I RGE_RS16170 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II RGE_RS16170 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III RGE_RS16175 PF00809 Pterin binding enzyme RGE_RS16180 PF00004 ATPase family associated with various cellular activities (AAA) RGE_RS16180 PF01434 Peptidase family M41 RGE_RS16180 PF06480 FtsH Extracellular RGE_RS16185 PF01728 FtsJ-like methyltransferase RGE_RS16190 PF01985 CRS1 / YhbY (CRM) domain RGE_RS16195 PF13664 RGE_RS16195 RGE_RS16200 PF01272 Transcription elongation factor, GreA/GreB, C-term RGE_RS16200 PF03449 Transcription elongation factor, N-terminal RGE_RS16205 PF02142 MGS-like domain RGE_RS16205 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain RGE_RS16205 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain RGE_RS16210 PF00117 Glutamine amidotransferase class-I RGE_RS16210 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain RGE_RS16215 PF01027 Inhibitor of apoptosis-promoting Bax1 RGE_RS16220 PF01938 TRAM domain RGE_RS16220 PF05958 tRNA (Uracil-5-)-methyltransferase RGE_RS16225 PF00140 Sigma-70 factor, region 1 RGE_RS16225 PF04539 Sigma-70 region 3 RGE_RS16225 PF04542 Sigma-70 region 2 RGE_RS16225 PF04545 Sigma-70, region 4 RGE_RS16230 PF01476 LysM domain RGE_RS16230 PF01551 Peptidase family M23 RGE_RS16235 PF01135 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) RGE_RS16240 PF01975 Survival protein SurE RGE_RS16245 PF00107 Zinc-binding dehydrogenase RGE_RS16245 PF08240 Alcohol dehydrogenase GroES-like domain RGE_RS16250 PF00072 Response regulator receiver domain RGE_RS16255 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RGE_RS16255 PF07730 Histidine kinase RGE_RS16265 PF01494 FAD binding domain RGE_RS16270 PF03209 RGE_RS16270 RGE_RS16275 PF01040 UbiA prenyltransferase family RGE_RS16280 PF01593 Flavin containing amine oxidoreductase RGE_RS16285 PF02954 Bacterial regulatory protein, Fis family RGE_RS16285 PF08448 PAS fold RGE_RS16285 PF13188 PAS domain RGE_RS16285 PF13426 PAS domain RGE_RS16290 PF02310 B12 binding domain RGE_RS16295 PF07284 RGE_RS16295 RGE_RS16300 PF00148 Nitrogenase component 1 type Oxidoreductase RGE_RS16305 PF00148 Nitrogenase component 1 type Oxidoreductase RGE_RS16305 PF08369 Proto-chlorophyllide reductase 57 kD subunit RGE_RS16310 PF02514 RGE_RS16310 RGE_RS16310 PF11965 RGE_RS16310 RGE_RS16315 PF00142 4Fe-4S iron sulfur cluster binding proteins, NifH/frxC family RGE_RS16320 PF03602 Conserved hypothetical protein 95 RGE_RS16320 PF07109 Magnesium-protoporphyrin IX methyltransferase C-terminus RGE_RS16325 PF03209 RGE_RS16325 RGE_RS16330 PF03967 Photosynthetic reaction centre, H-chain N-terminal region RGE_RS16330 PF05239 PRC-barrel domain RGE_RS16335 PF03703 RGE_RS16335 RGE_RS16345 PF02915 Rubrerythrin RGE_RS16350 PF12291 RGE_RS16350 RGE_RS16355 PF00494 Squalene/phytoene synthase RGE_RS16370 PF01593 Flavin containing amine oxidoreductase RGE_RS16380 PF02276 Photosynthetic reaction centre cytochrome C subunit RGE_RS16385 PF00124 Photosynthetic reaction centre protein RGE_RS16390 PF00124 Photosynthetic reaction centre protein RGE_RS16395 PF00556 Antenna complex alpha/beta subunit RGE_RS16405 PF00556 Antenna complex alpha/beta subunit RGE_RS16410 PF00148 Nitrogenase component 1 type Oxidoreductase RGE_RS16410 PF08369 Proto-chlorophyllide reductase 57 kD subunit RGE_RS16415 PF00148 Nitrogenase component 1 type Oxidoreductase RGE_RS16420 PF00142 4Fe-4S iron sulfur cluster binding proteins, NifH/frxC family RGE_RS16425 PF08240 Alcohol dehydrogenase GroES-like domain RGE_RS16430 PF00891 O-methyltransferase RGE_RS16430 PF16864 RGE_RS16430 RGE_RS16435 PF00348 Polyprenyl synthetase RGE_RS16440 PF00034 Cytochrome c RGE_RS16445 PF03916 RGE_RS16445 RGE_RS16450 PF13247 4Fe-4S dicluster domain RGE_RS16460 PF04055 Radical SAM superfamily RGE_RS16465 PF01209 ubiE/COQ5 methyltransferase family RGE_RS16470 PF01040 UbiA prenyltransferase family RGE_RS16475 PF03364 Polyketide cyclase / dehydrase and lipid transport RGE_RS16480 PF01738 Dienelactone hydrolase family RGE_RS16485 PF02541 Ppx/GppA phosphatase family RGE_RS16490 PF00300 Histidine phosphatase superfamily (branch 1) RGE_RS16500 PF00476 DNA polymerase family A RGE_RS16500 PF01367 5'-3' exonuclease, C-terminal SAM fold RGE_RS16500 PF01612 3'-5' exonuclease RGE_RS16500 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain RGE_RS16510 PF01636 Phosphotransferase enzyme family RGE_RS16520 PF00580 UvrD/REP helicase N-terminal domain RGE_RS16520 PF13361 UvrD-like helicase C-terminal domain RGE_RS16525 PF00072 Response regulator receiver domain RGE_RS16525 PF00512 His Kinase A (phospho-acceptor) domain RGE_RS16525 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RGE_RS16525 PF08447 PAS fold RGE_RS16525 PF08448 PAS fold RGE_RS16530 PF00478 IMP dehydrogenase / GMP reductase domain RGE_RS16535 PF00990 GGDEF domain RGE_RS16535 PF13424 Tetratricopeptide repeat RGE_RS16540 PF03572 Peptidase family S41 RGE_RS16540 PF13180 PDZ domain RGE_RS16545 PF00133 tRNA synthetases class I (I, L, M and V) RGE_RS16545 PF08264 Anticodon-binding domain of tRNA RGE_RS16545 PF10458 Valyl tRNA synthetase tRNA binding arm RGE_RS16550 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain RGE_RS16550 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain RGE_RS16555 PF00483 Nucleotidyl transferase RGE_RS16560 PF01206 Sulfurtransferase TusA RGE_RS16565 PF00293 NUDIX domain RGE_RS16565 PF14803 Nudix N-terminal RGE_RS16570 PF00291 Pyridoxal-phosphate dependent enzyme RGE_RS16580 PF01694 Rhomboid family RGE_RS16585 PF01370 NAD dependent epimerase/dehydratase family RGE_RS16585 PF02254 TrkA-N domain RGE_RS16590 PF00111 2Fe-2S iron-sulfur cluster binding domain RGE_RS16590 PF00175 Oxidoreductase NAD-binding domain RGE_RS16590 PF00970 Oxidoreductase FAD-binding domain RGE_RS16595 PF03401 Tripartite tricarboxylate transporter family receptor RGE_RS16600 PF00005 ABC transporter RGE_RS16605 PF00005 ABC transporter RGE_RS16605 PF12399 Branched-chain amino acid ATP-binding cassette transporter RGE_RS16610 PF02653 RGE_RS16610 RGE_RS16615 PF02653 RGE_RS16615 RGE_RS16620 PF00004 ATPase family associated with various cellular activities (AAA) RGE_RS16620 PF12002 MgsA AAA+ ATPase C terminal RGE_RS16620 PF16193 RGE_RS16620 RGE_RS16625 PF01584 CheW-like domain RGE_RS16630 PF03548 Outer membrane lipoprotein carrier protein LolA RGE_RS16635 PF01580 FtsK/SpoIIIE family RGE_RS16635 PF09397 Ftsk gamma domain RGE_RS16635 PF13491 RGE_RS16635 RGE_RS16640 PF00027 Cyclic nucleotide-binding domain RGE_RS16640 PF13545 Crp-like helix-turn-helix domain RGE_RS16645 PF07992 Pyridine nucleotide-disulphide oxidoreductase RGE_RS16650 PF00830 Ribosomal L28 family RGE_RS16655 PF00471 Ribosomal protein L33 RGE_RS16660 PF00487 RGE_RS16660 RGE_RS16660 PF01610 RGE_RS16660 RGE_RS16665 PF01189 NOL1/NOP2/sun family RGE_RS16670 PF00551 Formyl transferase RGE_RS16675 PF00579 tRNA synthetases class I (W and Y) RGE_RS16680 PF02230 Phospholipase/Carboxylesterase RGE_RS16690 PF12680 SnoaL-like domain RGE_RS16695 PF11528 Protein of unknown function (DUF3224) RGE_RS16705 PF07690 Major Facilitator Superfamily RGE_RS16710 PF07859 alpha/beta hydrolase fold RGE_RS16730 PF00248 Aldo/keto reductase family RGE_RS16740 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain RGE_RS16740 PF00672 HAMP domain RGE_RS16740 PF12729 RGE_RS16740 RGE_RS16745 PF02028 BCCT family transporter RGE_RS16750 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain RGE_RS16750 PF00672 HAMP domain RGE_RS16755 PF03544 Gram-negative bacterial TonB protein C-terminal RGE_RS16760 PF01618 RGE_RS16760 RGE_RS16765 PF02472 Biopolymer transport protein ExbD/TolR RGE_RS16770 PF02472 Biopolymer transport protein ExbD/TolR RGE_RS16780 PF00753 Metallo-beta-lactamase superfamily RGE_RS16785 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain RGE_RS16785 PF00672 HAMP domain RGE_RS16785 PF08447 PAS fold RGE_RS16790 PF13561 Enoyl-(Acyl carrier protein) reductase RGE_RS16795 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily RGE_RS16800 PF01081 KDPG and KHG aldolase RGE_RS16805 PF00920 Dehydratase family RGE_RS16810 PF04752 RGE_RS16810 RGE_RS16815 PF12804 MobA-like NTP transferase domain RGE_RS16820 PF01243 Pyridoxamine 5'-phosphate oxidase RGE_RS16820 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region RGE_RS16825 PF05643 Putative bacterial lipoprotein (DUF799) RGE_RS16830 PF16068 RGE_RS16830 RGE_RS16835 PF03783 Curli production assembly/transport component CsgG RGE_RS16840 PF00196 Bacterial regulatory proteins, luxR family RGE_RS16840 PF13401 AAA domain RGE_RS16850 PF00924 Mechanosensitive ion channel RGE_RS16855 PF00850 Histone deacetylase domain RGE_RS16860 PF07726 ATPase family associated with various cellular activities (AAA) RGE_RS16865 PF01882 RGE_RS16865 RGE_RS16870 PF01841 Transglutaminase-like superfamily RGE_RS16870 PF11992 RGE_RS16870 RGE_RS16875 PF13406 Transglycosylase SLT domain RGE_RS16880 PF04168 RGE_RS16880 RGE_RS16885 PF14403 RGE_RS16885 RGE_RS16890 PF01841 Transglutaminase-like superfamily RGE_RS16890 PF08379 RGE_RS16890 RGE_RS16895 PF04168 RGE_RS16895 RGE_RS16895 PF14403 RGE_RS16895 RGE_RS16900 PF01841 Transglutaminase-like superfamily RGE_RS16900 PF08379 RGE_RS16900 RGE_RS16900 PF09899 RGE_RS16900 RGE_RS16905 PF01075 Glycosyltransferase family 9 (heptosyltransferase) RGE_RS16905 PF13431 Tetratricopeptide repeat RGE_RS16905 PF13432 Tetratricopeptide repeat RGE_RS16910 PF00753 Metallo-beta-lactamase superfamily RGE_RS16910 PF03772 RGE_RS16910 RGE_RS16910 PF13567 RGE_RS16910 RGE_RS16915 PF14588 YjgF/chorismate_mutase-like, putative endoribonuclease RGE_RS16920 PF02600 Disulfide bond formation protein DsbB RGE_RS16925 PF07589 RGE_RS16925 RGE_RS16930 PF00521 DNA gyrase/topoisomerase IV, subunit A RGE_RS16935 PF01464 Transglycosylase SLT domain RGE_RS16940 PF00082 Subtilase family RGE_RS16940 PF02225 PA domain RGE_RS16945 PF00204 DNA gyrase B RGE_RS16945 PF00986 DNA gyrase B subunit, carboxyl terminus RGE_RS16945 PF01751 Toprim domain RGE_RS16945 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RGE_RS16950 PF01266 FAD dependent oxidoreductase RGE_RS16955 PF07690 Major Facilitator Superfamily RGE_RS16960 PF13649 Methyltransferase domain RGE_RS16965 PF00701 Dihydrodipicolinate synthetase family RGE_RS16970 PF06804 NlpB/DapX lipoprotein RGE_RS16985 PF08007 Cupin superfamily protein RGE_RS16995 PF00692 dUTPase RGE_RS17000 PF02441 Flavoprotein RGE_RS17000 PF04127 DNA / pantothenate metabolism flavoprotein RGE_RS17005 PF02810 SEC-C motif RGE_RS17005 PF03695 Uncharacterised protein family (UPF0149) RGE_RS17010 PF00583 Acetyltransferase (GNAT) family RGE_RS17015 PF01411 tRNA synthetases class II (A) RGE_RS17015 PF02272 DHHA1 domain RGE_RS17015 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain RGE_RS17020 PF04402 Protein of unknown function (DUF541) RGE_RS17025 PF00155 Aminotransferase class I and II RGE_RS17025 PF00392 Bacterial regulatory proteins, gntR family RGE_RS17030 PF00202 Aminotransferase class-III RGE_RS17035 PF00005 ABC transporter RGE_RS17035 PF08402 TOBE domain RGE_RS17040 PF13416 Bacterial extracellular solute-binding protein RGE_RS17045 PF00528 Binding-protein-dependent transport system inner membrane component RGE_RS17050 PF00528 Binding-protein-dependent transport system inner membrane component RGE_RS17055 PF00171 Aldehyde dehydrogenase family RGE_RS17060 PF00990 GGDEF domain RGE_RS17065 PF13609 Gram-negative porin RGE_RS17075 PF02390 Putative methyltransferase RGE_RS17080 PF02673 RGE_RS17080 RGE_RS17090 PF00440 Bacterial regulatory proteins, tetR family RGE_RS17090 PF16859 RGE_RS17090 RGE_RS17095 PF01135 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) RGE_RS17100 PF02321 Outer membrane efflux protein RGE_RS17105 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) RGE_RS17110 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain RGE_RS17110 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I RGE_RS17110 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II RGE_RS17110 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III RGE_RS17115 PF02080 TrkA-C domain RGE_RS17115 PF03600 Citrate transporter RGE_RS17120 PF00730 HhH-GPD superfamily base excision DNA repair protein RGE_RS17120 PF02805 Metal binding domain of Ada RGE_RS17120 PF06029 AlkA N-terminal domain RGE_RS17120 PF12833 Helix-turn-helix domain RGE_RS17125 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain RGE_RS17130 PF00892 EamA-like transporter family RGE_RS17140 PF06945 RGE_RS17140 RGE_RS17140 PF12512 RGE_RS17140 RGE_RS17145 PF01554 MatE RGE_RS17150 PF00512 His Kinase A (phospho-acceptor) domain RGE_RS17150 PF00672 HAMP domain RGE_RS17150 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RGE_RS17155 PF00072 Response regulator receiver domain RGE_RS17155 PF00486 Transcriptional regulatory protein, C terminal RGE_RS17160 PF07813 LTXXQ motif family protein RGE_RS17170 PF11304 RGE_RS17170 RGE_RS17180 PF01636 Phosphotransferase enzyme family RGE_RS17180 PF13671 AAA domain RGE_RS17190 PF00582 Universal stress protein family RGE_RS17200 PF04055 Radical SAM superfamily RGE_RS17200 PF13353 4Fe-4S single cluster domain RGE_RS17205 PF01515 Phosphate acetyl/butaryl transferase RGE_RS17205 PF01575 MaoC like domain RGE_RS17210 PF00141 Peroxidase RGE_RS17215 PF01062 RGE_RS17215 RGE_RS17225 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) RGE_RS17225 PF02403 Seryl-tRNA synthetase N-terminal domain RGE_RS17230 PF02401 LytB protein RGE_RS17235 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase RGE_RS17240 PF04002 RadC-like JAB domain RGE_RS17245 PF01713 Smr domain RGE_RS17250 PF07638 ECF sigma factor RGE_RS17265 PF01152 Bacterial-like globin RGE_RS17270 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain RGE_RS17275 PF00990 GGDEF domain RGE_RS17280 PF01739 CheR methyltransferase, SAM binding domain RGE_RS17280 PF03705 CheR methyltransferase, all-alpha domain RGE_RS17285 PF03975 CheD chemotactic sensory transduction RGE_RS17290 PF00072 Response regulator receiver domain RGE_RS17290 PF01339 CheB methylesterase RGE_RS17295 PF01925 RGE_RS17295 RGE_RS17300 PF04055 Radical SAM superfamily RGE_RS17300 PF06969 HemN C-terminal domain RGE_RS17305 PF01725 Ham1 family RGE_RS17310 PF01138 3' exoribonuclease family, domain 1 RGE_RS17310 PF03725 3' exoribonuclease family, domain 2 RGE_RS17315 PF13672 Protein phosphatase 2C RGE_RS17320 PF00069 Protein kinase domain RGE_RS17325 PF03755 RGE_RS17325 RGE_RS17325 PF08340 RGE_RS17325 RGE_RS17330 PF13472 GDSL-like Lipase/Acylhydrolase family RGE_RS17335 PF01565 FAD binding domain RGE_RS17335 PF09330 D-lactate dehydrogenase, membrane binding RGE_RS17340 PF01070 FMN-dependent dehydrogenase RGE_RS17345 PF00392 Bacterial regulatory proteins, gntR family RGE_RS17345 PF07729 FCD domain RGE_RS17350 PF02652 RGE_RS17350 RGE_RS17355 PF01964 ThiC family RGE_RS17355 PF13667 ThiC-associated domain RGE_RS17360 PF04519 RGE_RS17360 RGE_RS17370 PF04519 RGE_RS17370 RGE_RS17380 PF00171 Aldehyde dehydrogenase family RGE_RS17385 PF00158 Sigma-54 interaction domain RGE_RS17385 PF01590 GAF domain RGE_RS17385 PF02954 Bacterial regulatory protein, Fis family RGE_RS17390 PF00625 Guanylate kinase RGE_RS17395 PF01192 RNA polymerase Rpb6 RGE_RS17410 PF02824 TGS domain RGE_RS17410 PF04607 Region found in RelA / SpoT proteins RGE_RS17410 PF13291 ACT domain RGE_RS17410 PF13328 HD domain RGE_RS17415 PF01272 Transcription elongation factor, GreA/GreB, C-term RGE_RS17415 PF03449 Transcription elongation factor, N-terminal RGE_RS17420 PF02592 RGE_RS17420 RGE_RS17425 PF00656 Caspase domain RGE_RS17430 PF09997 RGE_RS17430 RGE_RS17435 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit RGE_RS17435 PF14720 NiFe/NiFeSe hydrogenase small subunit C-terminal RGE_RS17440 PF00374 Nickel-dependent hydrogenase RGE_RS17445 PF04955 RGE_RS17445 RGE_RS17450 PF01292 Prokaryotic cytochrome b561 RGE_RS17455 PF01381 Helix-turn-helix RGE_RS17460 PF01750 Hydrogenase maturation protease RGE_RS17465 PF01455 HupF/HypC family RGE_RS17470 PF07449 Hydrogenase-1 expression protein HyaE RGE_RS17475 PF04809 HupH hydrogenase expression protein, C-terminal conserved region RGE_RS17480 PF00301 Rubredoxin RGE_RS17485 PF11939 Protein of unknown function (DUF3457) RGE_RS17495 PF01155 Hydrogenase expression/synthesis hypA family RGE_RS17500 PF02492 CobW/HypB/UreG, nucleotide-binding domain RGE_RS17510 PF01455 HupF/HypC family RGE_RS17515 PF01924 Hydrogenase formation hypA family RGE_RS17520 PF00586 AIR synthase related protein, N-terminal domain RGE_RS17520 PF02769 AIR synthase related protein, C-terminal domain RGE_RS17525 PF05345 Putative Ig domain RGE_RS17530 PF00072 Response regulator receiver domain RGE_RS17530 PF00158 Sigma-54 interaction domain RGE_RS17530 PF02954 Bacterial regulatory protein, Fis family RGE_RS17535 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit RGE_RS17535 PF14720 NiFe/NiFeSe hydrogenase small subunit C-terminal RGE_RS17540 PF00374 Nickel-dependent hydrogenase RGE_RS17545 PF13419 Haloacid dehalogenase-like hydrolase RGE_RS17550 PF01116 Fructose-bisphosphate aldolase class-II RGE_RS17555 PF13419 Haloacid dehalogenase-like hydrolase RGE_RS17560 PF00456 Transketolase, thiamine diphosphate binding domain RGE_RS17560 PF02779 Transketolase, pyrimidine binding domain RGE_RS17560 PF02780 Transketolase, C-terminal domain RGE_RS17565 PF00485 Phosphoribulokinase / Uridine kinase family RGE_RS17570 PF00316 Fructose-1-6-bisphosphatase RGE_RS17575 PF00004 ATPase family associated with various cellular activities (AAA) RGE_RS17580 PF00834 Ribulose-phosphate 3 epimerase family RGE_RS17585 PF00101 Ribulose bisphosphate carboxylase, small chain RGE_RS17590 PF00016 Ribulose bisphosphate carboxylase large chain, catalytic domain RGE_RS17590 PF02788 Ribulose bisphosphate carboxylase large chain, N-terminal domain RGE_RS17595 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RGE_RS17595 PF03466 LysR substrate binding domain RGE_RS17600 PF00512 His Kinase A (phospho-acceptor) domain RGE_RS17600 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RGE_RS17600 PF08448 PAS fold RGE_RS17605 PF00111 2Fe-2S iron-sulfur cluster binding domain RGE_RS17615 PF01553 Acyltransferase RGE_RS17620 PF00857 Isochorismatase family RGE_RS17625 PF00106 short chain dehydrogenase RGE_RS17635 PF15579 RGE_RS17635 RGE_RS17655 PF05488 PAAR motif RGE_RS17660 PF00122 E1-E2 ATPase RGE_RS17660 PF00403 Heavy-metal-associated domain RGE_RS17660 PF00702 haloacid dehalogenase-like hydrolase RGE_RS17665 PF00376 MerR family regulatory protein RGE_RS17665 PF09278 MerR, DNA binding RGE_RS17675 PF00127 Copper binding proteins, plastocyanin/azurin family RGE_RS17680 PF04214 RGE_RS17680 RGE_RS17685 PF00072 Response regulator receiver domain RGE_RS17685 PF00512 His Kinase A (phospho-acceptor) domain RGE_RS17685 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RGE_RS17690 PF01011 PQQ enzyme repeat RGE_RS17690 PF13360 PQQ-like domain RGE_RS17700 PF01408 Oxidoreductase family, NAD-binding Rossmann fold RGE_RS17700 PF02894 Oxidoreductase family, C-terminal alpha/beta domain RGE_RS17710 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family RGE_RS17765 PF10503 Esterase PHB depolymerase RGE_RS17775 PF13545 Crp-like helix-turn-helix domain RGE_RS17780 PF01841 Transglutaminase-like superfamily RGE_RS17790 PF01339 CheB methylesterase RGE_RS17790 PF01739 CheR methyltransferase, SAM binding domain RGE_RS17790 PF03705 CheR methyltransferase, all-alpha domain RGE_RS17790 PF13596 PAS domain RGE_RS17795 PF00072 Response regulator receiver domain RGE_RS17795 PF00512 His Kinase A (phospho-acceptor) domain RGE_RS17795 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RGE_RS17805 PF07219 RGE_RS17805 RGE_RS17810 PF04375 RGE_RS17810 RGE_RS17815 PF02602 Uroporphyrinogen-III synthase HemD RGE_RS17820 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain RGE_RS17820 PF03900 Porphobilinogen deaminase, C-terminal domain RGE_RS17825 PF00311 Phosphoenolpyruvate carboxylase RGE_RS17830 PF00072 Response regulator receiver domain RGE_RS17830 PF04397 LytTr DNA-binding domain RGE_RS17835 PF06580 RGE_RS17835 RGE_RS17840 PF00206 Lyase RGE_RS17840 PF14698 Argininosuccinate lyase C-terminal RGE_RS17845 PF00817 impB/mucB/samB family RGE_RS17845 PF11798 IMS family HHH motif RGE_RS17845 PF11799 impB/mucB/samB family C-terminal domain RGE_RS17850 PF01814 Hemerythrin HHE cation binding domain RGE_RS17855 PF01070 FMN-dependent dehydrogenase RGE_RS17865 PF00692 dUTPase RGE_RS17870 PF06127 RGE_RS17870 RGE_RS17875 PF01212 Beta-eliminating lyase RGE_RS17880 PF00881 Nitroreductase family RGE_RS17885 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain RGE_RS17885 PF00672 HAMP domain RGE_RS17885 PF12729 RGE_RS17885 RGE_RS17890 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain RGE_RS17890 PF00672 HAMP domain RGE_RS17890 PF12729 RGE_RS17890 RGE_RS17900 PF11390 RGE_RS17900 RGE_RS17905 PF00037 4Fe-4S binding domain RGE_RS17905 PF00384 Molybdopterin oxidoreductase RGE_RS17905 PF01568 Molydopterin dinucleotide binding domain RGE_RS17905 PF04879 Molybdopterin oxidoreductase Fe4S4 domain RGE_RS17905 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region RGE_RS17905 PF13510 2Fe-2S iron-sulfur cluster binding domain RGE_RS17910 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit RGE_RS17910 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region RGE_RS17915 PF01257 Thioredoxin-like [2Fe-2S] ferredoxin RGE_RS17920 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RGE_RS17920 PF03466 LysR substrate binding domain RGE_RS17925 PF07690 Major Facilitator Superfamily RGE_RS17930 PF01883 Domain of unknown function DUF59 RGE_RS17930 PF10609 ParA/MinD ATPase like RGE_RS17935 PF01588 Putative tRNA binding domain RGE_RS17935 PF09334 tRNA synthetases class I (M) RGE_RS17940 PF00512 His Kinase A (phospho-acceptor) domain RGE_RS17940 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RGE_RS17940 PF05231 RGE_RS17940 RGE_RS17945 PF00497 Bacterial extracellular solute-binding proteins, family 3 RGE_RS17950 PF00072 Response regulator receiver domain RGE_RS17955 PF00916 RGE_RS17955 RGE_RS17955 PF01740 STAS domain RGE_RS17960 PF13937 RGE_RS17960 RGE_RS17970 PF11943 RGE_RS17970 RGE_RS17975 PF02616 ScpA/B protein RGE_RS17980 PF00512 His Kinase A (phospho-acceptor) domain RGE_RS17980 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RGE_RS17985 PF00072 Response regulator receiver domain RGE_RS17985 PF00196 Bacterial regulatory proteins, luxR family RGE_RS17990 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain RGE_RS17995 PF01925 RGE_RS17995 RGE_RS18000 PF00881 Nitroreductase family RGE_RS18005 PF08897 RGE_RS18005 RGE_RS18010 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle RGE_RS18015 PF00403 Heavy-metal-associated domain RGE_RS18020 PF01966 HD domain RGE_RS18020 PF11871 RGE_RS18020 RGE_RS18030 PF00004 ATPase family associated with various cellular activities (AAA) RGE_RS18035 PF13302 Acetyltransferase (GNAT) domain RGE_RS18040 PF00326 Prolyl oligopeptidase family RGE_RS18045 PF05762 VWA domain containing CoxE-like protein RGE_RS18050 PF01103 Surface antigen RGE_RS18055 PF04357 RGE_RS18055 RGE_RS18070 PF13511 RGE_RS18070 RGE_RS18075 PF04314 Protein of unknown function (DUF461) RGE_RS18080 PF00890 FAD binding domain RGE_RS18085 PF00205 Thiamine pyrophosphate enzyme, central domain RGE_RS18085 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain RGE_RS18085 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain RGE_RS18090 PF00027 Cyclic nucleotide-binding domain RGE_RS18090 PF13545 Crp-like helix-turn-helix domain RGE_RS18095 PF01048 Phosphorylase superfamily RGE_RS18100 PF13302 Acetyltransferase (GNAT) domain RGE_RS18105 PF00202 Aminotransferase class-III RGE_RS18110 PF02146 Sir2 family RGE_RS18120 PF15919 RGE_RS18120 RGE_RS18125 PF03860 Domain of Unknown Function (DUF326) RGE_RS18130 PF03692 RGE_RS18130 RGE_RS18135 PF06733 DEAD_2 RGE_RS18135 PF12705 PD-(D/E)XK nuclease superfamily RGE_RS18135 PF13307 Helicase C-terminal domain RGE_RS18140 PF01925 RGE_RS18140 RGE_RS18145 PF13275 S4 domain RGE_RS18150 PF01168 Alanine racemase, N-terminal domain RGE_RS18150 PF14031 Putative serine dehydratase domain RGE_RS18155 PF13302 Acetyltransferase (GNAT) domain RGE_RS18165 PF13643 RGE_RS18165 RGE_RS18170 PF14106 RGE_RS18170 RGE_RS18175 PF05598 RGE_RS18175 RGE_RS18175 PF13751 RGE_RS18175 RGE_RS18185 PF00501 AMP-binding enzyme RGE_RS18185 PF13193 AMP-binding enzyme C-terminal domain RGE_RS18190 PF00378 Enoyl-CoA hydratase/isomerase family RGE_RS18195 PF00582 Universal stress protein family RGE_RS18200 PF00361 NADH-Ubiquinone/plastoquinone (complex I), various chains RGE_RS18200 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus RGE_RS18200 PF04039 RGE_RS18200 RGE_RS18200 PF13244 RGE_RS18200 RGE_RS18205 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L RGE_RS18210 PF00361 NADH-Ubiquinone/plastoquinone (complex I), various chains RGE_RS18215 PF01899 RGE_RS18215 RGE_RS18220 PF04066 RGE_RS18220 RGE_RS18225 PF03334 RGE_RS18225 RGE_RS18230 PF03776 Septum formation topological specificity factor MinE RGE_RS18235 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain RGE_RS18240 PF03775 Septum formation inhibitor MinC, C-terminal domain RGE_RS18240 PF05209 Septum formation inhibitor MinC, N-terminal domain RGE_RS18245 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain RGE_RS18260 PF00440 Bacterial regulatory proteins, tetR family RGE_RS18265 PF00072 Response regulator receiver domain RGE_RS18265 PF01339 CheB methylesterase RGE_RS18270 PF01739 CheR methyltransferase, SAM binding domain RGE_RS18270 PF03705 CheR methyltransferase, all-alpha domain RGE_RS18275 PF00072 Response regulator receiver domain RGE_RS18275 PF00563 EAL domain RGE_RS18280 PF01584 CheW-like domain RGE_RS18285 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain RGE_RS18285 PF12729 RGE_RS18285 RGE_RS18290 PF01584 CheW-like domain RGE_RS18290 PF01627 Hpt domain RGE_RS18290 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RGE_RS18290 PF02895 Signal transducing histidine kinase, homodimeric domain RGE_RS18295 PF13466 STAS domain RGE_RS18300 PF00072 Response regulator receiver domain RGE_RS18305 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain RGE_RS18315 PF01019 Gamma-glutamyltranspeptidase RGE_RS18320 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain RGE_RS18320 PF08447 PAS fold RGE_RS18325 PF04257 Exodeoxyribonuclease V, gamma subunit RGE_RS18330 PF00580 UvrD/REP helicase N-terminal domain RGE_RS18330 PF12705 PD-(D/E)XK nuclease superfamily RGE_RS18330 PF13361 UvrD-like helicase C-terminal domain RGE_RS18335 PF13538 UvrD-like helicase C-terminal domain RGE_RS18335 PF13604 AAA domain RGE_RS18340 PF00149 Calcineurin-like phosphoesterase RGE_RS18345 PF13476 AAA domain RGE_RS18360 PF02735 Ku70/Ku80 beta-barrel domain RGE_RS18365 PF00528 Binding-protein-dependent transport system inner membrane component RGE_RS18370 PF00005 ABC transporter RGE_RS18370 PF08402 TOBE domain RGE_RS18380 PF03572 Peptidase family S41 RGE_RS18380 PF13180 PDZ domain RGE_RS18385 PF07589 RGE_RS18385 RGE_RS18390 PF00899 ThiF family RGE_RS18395 PF03641 Possible lysine decarboxylase RGE_RS18400 PF00491 Arginase family RGE_RS18405 PF14346 Domain of unknown function (DUF4398) RGE_RS18410 PF00691 OmpA family RGE_RS18410 PF14346 Domain of unknown function (DUF4398) RGE_RS18415 PF06165 Glycosyltransferase family 36 RGE_RS18415 PF10091 Putative glucoamylase RGE_RS18415 PF17167 RGE_RS18415 RGE_RS18425 PF13545 Crp-like helix-turn-helix domain RGE_RS18435 PF01266 FAD dependent oxidoreductase RGE_RS18440 PF13633 Prokaryotic N-terminal methylation site RGE_RS18445 PF13544 RGE_RS18445 RGE_RS18465 PF00916 RGE_RS18465 RGE_RS18465 PF01740 STAS domain RGE_RS18470 PF07722 Peptidase C26 RGE_RS18475 PF00565 Staphylococcal nuclease homologue RGE_RS18480 PF06803 RGE_RS18480 RGE_RS18485 PF00270 DEAD/DEAH box helicase RGE_RS18485 PF00271 Helicase conserved C-terminal domain RGE_RS18485 PF08494 RGE_RS18485 RGE_RS18490 PF04250 RGE_RS18490 RGE_RS18495 PF06089 RGE_RS18495 RGE_RS18500 PF01547 Bacterial extracellular solute-binding protein RGE_RS18505 PF00528 Binding-protein-dependent transport system inner membrane component RGE_RS18510 PF00528 Binding-protein-dependent transport system inner membrane component RGE_RS18515 PF00005 ABC transporter RGE_RS18515 PF08402 TOBE domain RGE_RS18520 PF07690 Major Facilitator Superfamily RGE_RS18525 PF13360 PQQ-like domain RGE_RS18530 PF07690 Major Facilitator Superfamily RGE_RS18535 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RGE_RS18535 PF03466 LysR substrate binding domain RGE_RS18540 PF00990 GGDEF domain RGE_RS18540 PF13424 Tetratricopeptide repeat RGE_RS18545 PF00924 Mechanosensitive ion channel RGE_RS18550 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RGE_RS18550 PF03466 LysR substrate binding domain RGE_RS18555 PF13561 Enoyl-(Acyl carrier protein) reductase RGE_RS18560 PF00563 EAL domain RGE_RS18560 PF02378 Phosphotransferase system, EIIC RGE_RS18565 PF00563 EAL domain RGE_RS18565 PF02378 Phosphotransferase system, EIIC RGE_RS18570 PF01176 Translation initiation factor 1A / IF-1 RGE_RS18575 PF06532 RGE_RS18575 RGE_RS18580 PF04542 Sigma-70 region 2 RGE_RS18580 PF08281 Sigma-70, region 4 RGE_RS18585 PF07681 RGE_RS18585 RGE_RS18595 PF10048 RGE_RS18595 RGE_RS18600 PF00563 EAL domain RGE_RS18600 PF00990 GGDEF domain RGE_RS18600 PF13188 PAS domain RGE_RS18605 PF00221 Aromatic amino acid lyase RGE_RS18610 PF01175 Urocanase RGE_RS18615 PF00392 Bacterial regulatory proteins, gntR family RGE_RS18615 PF07702 UTRA domain RGE_RS18620 PF05962 HutD RGE_RS18625 PF01979 Amidohydrolase family RGE_RS18630 PF05013 N-formylglutamate amidohydrolase RGE_RS18635 PF01979 Amidohydrolase family RGE_RS18640 PF13469 Sulfotransferase family RGE_RS18645 PF12951 RGE_RS18645 RGE_RS18645 PF14252 RGE_RS18645 RGE_RS18650 PF02321 Outer membrane efflux protein RGE_RS18655 PF16576 RGE_RS18655 RGE_RS18660 PF16576 RGE_RS18660 RGE_RS18665 PF16576 RGE_RS18665 RGE_RS18675 PF01695 IstB-like ATP binding protein RGE_RS18680 PF00665 Integrase core domain RGE_RS18690 PF07978 NIPSNAP RGE_RS18695 PF03992 Antibiotic biosynthesis monooxygenase RGE_RS18700 PF12840 Helix-turn-helix domain RGE_RS18705 PF03447 Homoserine dehydrogenase, NAD binding domain RGE_RS18705 PF08666 SAF domain RGE_RS18720 PF00330 Aconitase family (aconitate hydratase) RGE_RS18720 PF00694 Aconitase C-terminal domain RGE_RS18725 PF04199 Putative cyclase RGE_RS18730 PF01614 Bacterial transcriptional regulator RGE_RS18730 PF09339 IclR helix-turn-helix domain RGE_RS18735 PF05860 haemagglutination activity domain RGE_RS18735 PF13018 RGE_RS18735 RGE_RS18740 PF08479 POTRA domain, ShlB-type RGE_RS18750 PF00270 DEAD/DEAH box helicase RGE_RS18750 PF00271 Helicase conserved C-terminal domain RGE_RS18755 PF00270 DEAD/DEAH box helicase RGE_RS18755 PF00271 Helicase conserved C-terminal domain RGE_RS18755 PF03880 DbpA RNA binding domain RGE_RS18760 PF01863 Protein of unknown function DUF45 RGE_RS18770 PF00465 Iron-containing alcohol dehydrogenase RGE_RS18775 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RGE_RS18775 PF03466 LysR substrate binding domain RGE_RS18780 PF00106 short chain dehydrogenase RGE_RS18790 PF01909 Nucleotidyltransferase domain RGE_RS18795 PF13020 RGE_RS18795 RGE_RS18800 PF10150 Ribonuclease E/G family RGE_RS18805 PF02545 Maf-like protein RGE_RS18810 PF02590 Predicted SPOUT methyltransferase RGE_RS18815 PF02410 Oligomerisation domain RGE_RS18820 PF01467 Cytidylyltransferase RGE_RS18825 PF01218 Coproporphyrinogen III oxidase RGE_RS18830 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain RGE_RS18830 PF02843 Phosphoribosylglycinamide synthetase, C domain RGE_RS18830 PF02844 Phosphoribosylglycinamide synthetase, N domain RGE_RS18835 PF01709 Transcriptional regulator RGE_RS18840 PF05872 RGE_RS18840 RGE_RS18845 PF04940 Sensors of blue-light using FAD RGE_RS18850 PF06629 RGE_RS18850 RGE_RS18860 PF00749 tRNA synthetases class I (E and Q), catalytic domain RGE_RS18860 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain RGE_RS18865 PF11454 RGE_RS18865 RGE_RS18870 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase RGE_RS18875 PF05661 RGE_RS18875 RGE_RS18885 PF08668 HDOD domain RGE_RS18890 PF13614 AAA domain RGE_RS18895 PF00155 Aminotransferase class I and II RGE_RS18895 PF00392 Bacterial regulatory proteins, gntR family RGE_RS18905 PF00266 Aminotransferase class-V RGE_RS18910 PF00990 GGDEF domain RGE_RS18910 PF01814 Hemerythrin HHE cation binding domain RGE_RS18930 PF00485 Phosphoribulokinase / Uridine kinase family RGE_RS18940 PF00583 Acetyltransferase (GNAT) family RGE_RS18960 PF01548 RGE_RS18960 RGE_RS18960 PF02371 RGE_RS18960 RGE_RS18965 PF04055 Radical SAM superfamily RGE_RS18965 PF08497 RGE_RS18965 RGE_RS18965 PF11842 RGE_RS18965 RGE_RS18975 PF00005 ABC transporter RGE_RS18975 PF00664 ABC transporter transmembrane region RGE_RS18980 PF00732 GMC oxidoreductase RGE_RS18980 PF05199 GMC oxidoreductase RGE_RS18985 PF00296 Luciferase-like monooxygenase RGE_RS18995 PF00149 Calcineurin-like phosphoesterase RGE_RS19000 PF13444 Acetyltransferase (GNAT) domain RGE_RS19005 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase RGE_RS19010 PF01464 Transglycosylase SLT domain RGE_RS19015 PF00464 Serine hydroxymethyltransferase RGE_RS19020 PF03477 ATP cone domain RGE_RS19025 PF12019 Type II transport protein GspH RGE_RS19030 PF07963 Prokaryotic N-terminal methylation motif RGE_RS19030 PF16732 RGE_RS19030 RGE_RS19035 PF13544 RGE_RS19035 RGE_RS19045 PF14341 RGE_RS19045 RGE_RS19055 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region RGE_RS19055 PF01872 RibD C-terminal domain RGE_RS19060 PF07589 RGE_RS19060 RGE_RS19065 PF00925 GTP cyclohydrolase II RGE_RS19065 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase RGE_RS19070 PF00885 6,7-dimethyl-8-ribityllumazine synthase RGE_RS19075 PF01029 NusB family RGE_RS19080 PF00155 Aminotransferase class I and II RGE_RS19085 PF03061 Thioesterase superfamily RGE_RS19090 PF01618 RGE_RS19090 RGE_RS19095 PF02472 Biopolymer transport protein ExbD/TolR RGE_RS19100 PF13103 TonB C terminal RGE_RS19105 PF01470 Pyroglutamyl peptidase RGE_RS19110 PF00884 Sulfatase RGE_RS19110 PF08019 RGE_RS19110 RGE_RS19115 PF01569 PAP2 superfamily RGE_RS19120 PF01968 Hydantoinase/oxoprolinase RGE_RS19120 PF02538 RGE_RS19120 RGE_RS19120 PF05378 RGE_RS19120 RGE_RS19125 PF00437 Type II/IV secretion system protein RGE_RS19125 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain RGE_RS19130 PF00005 ABC transporter RGE_RS19135 PF01061 RGE_RS19135 RGE_RS19140 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RGE_RS19140 PF12727 PBP superfamily domain RGE_RS19150 PF00593 TonB dependent receptor RGE_RS19150 PF07715 TonB-dependent Receptor Plug Domain RGE_RS19155 PF00111 2Fe-2S iron-sulfur cluster binding domain RGE_RS19155 PF01799 [2Fe-2S] binding domain RGE_RS19160 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain RGE_RS19160 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase RGE_RS19165 PF00941 FAD binding domain in molybdopterin dehydrogenase RGE_RS19170 PF07728 AAA domain (dynein-related subfamily) RGE_RS19175 PF00080 Copper/zinc superoxide dismutase (SODC) RGE_RS19180 PF05762 VWA domain containing CoxE-like protein RGE_RS19190 PF03781 Sulfatase-modifying factor enzyme 1 RGE_RS19195 PF00072 Response regulator receiver domain RGE_RS19195 PF00196 Bacterial regulatory proteins, luxR family RGE_RS19200 PF00072 Response regulator receiver domain RGE_RS19200 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RGE_RS19200 PF07730 Histidine kinase RGE_RS19210 PF00072 Response regulator receiver domain RGE_RS19215 PF01584 CheW-like domain RGE_RS19215 PF01627 Hpt domain RGE_RS19215 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RGE_RS19215 PF02895 Signal transducing histidine kinase, homodimeric domain RGE_RS19220 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain RGE_RS19220 PF00672 HAMP domain RGE_RS19225 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain RGE_RS19225 PF00672 HAMP domain RGE_RS19225 PF12729 RGE_RS19225 RGE_RS19230 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain RGE_RS19235 PF01584 CheW-like domain RGE_RS19240 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain RGE_RS19240 PF00672 HAMP domain RGE_RS19240 PF17201 RGE_RS19240 RGE_RS19245 PF00072 Response regulator receiver domain RGE_RS19245 PF00512 His Kinase A (phospho-acceptor) domain RGE_RS19245 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RGE_RS19245 PF08447 PAS fold RGE_RS19245 PF08448 PAS fold RGE_RS19245 PF12860 RGE_RS19245 RGE_RS19250 PF02687 RGE_RS19250 RGE_RS19255 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase RGE_RS19265 PF00962 Adenosine/AMP deaminase RGE_RS19270 PF13433 Periplasmic binding protein domain RGE_RS19275 PF02653 RGE_RS19275 RGE_RS19280 PF02653 RGE_RS19280 RGE_RS19285 PF00005 ABC transporter RGE_RS19285 PF12399 Branched-chain amino acid ATP-binding cassette transporter RGE_RS19290 PF00005 ABC transporter RGE_RS19295 PF03693 Uncharacterised protein family (UPF0156) RGE_RS19300 PF05016 Plasmid stabilisation system protein RGE_RS19305 PF12802 MarR family RGE_RS19310 PF00582 Universal stress protein family RGE_RS19310 PF07690 Major Facilitator Superfamily RGE_RS19320 PF00245 Alkaline phosphatase RGE_RS19330 PF00005 ABC transporter RGE_RS19335 PF02687 RGE_RS19335 RGE_RS19340 PF00107 Zinc-binding dehydrogenase RGE_RS19340 PF08240 Alcohol dehydrogenase GroES-like domain RGE_RS19345 PF06745 KaiC RGE_RS19350 PF07689 KaiB domain RGE_RS19355 PF00563 EAL domain RGE_RS19355 PF00990 GGDEF domain RGE_RS19355 PF08448 PAS fold RGE_RS19355 PF13426 PAS domain RGE_RS19360 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RGE_RS19360 PF03466 LysR substrate binding domain RGE_RS19365 PF00892 EamA-like transporter family RGE_RS19375 PF10088 RGE_RS19375 RGE_RS19385 PF13391 RGE_RS19385 RGE_RS19390 PF08378 RGE_RS19390 RGE_RS19395 PF00593 TonB dependent receptor RGE_RS19395 PF07715 TonB-dependent Receptor Plug Domain RGE_RS19400 PF03929 RGE_RS19400 RGE_RS19405 PF01774 UreD urease accessory protein RGE_RS19410 PF00155 Aminotransferase class I and II RGE_RS19410 PF00392 Bacterial regulatory proteins, gntR family RGE_RS19415 PF11142 RGE_RS19415 RGE_RS19420 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region RGE_RS19425 PF00083 Sugar (and other) transporter RGE_RS19430 PF00528 Binding-protein-dependent transport system inner membrane component RGE_RS19435 PF00005 ABC transporter RGE_RS19440 PF09084 NMT1/THI5 like RGE_RS19445 PF01546 Peptidase family M20/M25/M40 RGE_RS19445 PF07687 Peptidase dimerisation domain RGE_RS19450 PF01546 Peptidase family M20/M25/M40 RGE_RS19450 PF09349 OHCU decarboxylase RGE_RS19455 PF01522 Polysaccharide deacetylase RGE_RS19460 PF00392 Bacterial regulatory proteins, gntR family RGE_RS19460 PF07729 FCD domain RGE_RS19465 PF00576 HIUase/Transthyretin family RGE_RS19470 PF06181 RGE_RS19470 RGE_RS19475 PF05870 Phenolic acid decarboxylase (PAD) RGE_RS19480 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RGE_RS19480 PF03466 LysR substrate binding domain RGE_RS19495 PF00501 AMP-binding enzyme RGE_RS19495 PF13193 AMP-binding enzyme C-terminal domain RGE_RS19500 PF00027 Cyclic nucleotide-binding domain RGE_RS19500 PF13545 Crp-like helix-turn-helix domain RGE_RS19505 PF02625 XdhC and CoxI family RGE_RS19505 PF13478 XdhC Rossmann domain RGE_RS19510 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain RGE_RS19510 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase RGE_RS19515 PF00111 2Fe-2S iron-sulfur cluster binding domain RGE_RS19515 PF00941 FAD binding domain in molybdopterin dehydrogenase RGE_RS19515 PF01799 [2Fe-2S] binding domain RGE_RS19515 PF03450 CO dehydrogenase flavoprotein C-terminal domain RGE_RS19520 PF01979 Amidohydrolase family RGE_RS19525 PF00005 ABC transporter RGE_RS19530 PF02653 RGE_RS19530 RGE_RS19535 PF02653 RGE_RS19535 RGE_RS19540 PF02608 Basic membrane protein RGE_RS19545 PF13609 Gram-negative porin RGE_RS19550 PF01432 Peptidase family M3 RGE_RS19550 PF08439 Oligopeptidase F RGE_RS19555 PF00072 Response regulator receiver domain RGE_RS19555 PF00196 Bacterial regulatory proteins, luxR family RGE_RS19560 PF00072 Response regulator receiver domain RGE_RS19560 PF00512 His Kinase A (phospho-acceptor) domain RGE_RS19560 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RGE_RS19565 PF00547 Urease, gamma subunit RGE_RS19570 PF00699 Urease beta subunit RGE_RS19575 PF00449 Urease alpha-subunit, N-terminal domain RGE_RS19575 PF01979 Amidohydrolase family RGE_RS19580 PF01289 Thiol-activated cytolysin RGE_RS19585 PF02222 ATP-grasp domain RGE_RS19585 PF02875 Mur ligase family, glutamate ligase domain RGE_RS19585 PF08245 Mur ligase middle domain RGE_RS19590 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain RGE_RS19595 PF00005 ABC transporter RGE_RS19595 PF00664 ABC transporter transmembrane region RGE_RS19600 PF08909 RGE_RS19600 RGE_RS19605 PF10543 RGE_RS19605 RGE_RS19610 PF00180 Isocitrate/isopropylmalate dehydrogenase RGE_RS19615 PF07866 Protein of unknown function (DUF1653) RGE_RS19620 PF00440 Bacterial regulatory proteins, tetR family RGE_RS19625 PF06792 Uncharacterised protein family (UPF0261) RGE_RS19630 PF09370 TIM-barrel signal transduction protein RGE_RS19635 PF01329 Pterin 4 alpha carbinolamine dehydratase RGE_RS19640 PF08544 GHMP kinases C terminal RGE_RS19645 PF09176 Methylene-tetrahydromethanopterin dehydrogenase, N-terminal RGE_RS19650 PF02655 ATP-grasp domain RGE_RS19655 PF02289 Cyclohydrolase (MCH) RGE_RS19660 PF08443 RimK-like ATP-grasp domain RGE_RS19665 PF01874 ATP:dephospho-CoA triphosphoribosyl transferase RGE_RS19670 PF08714 Formaldehyde-activating enzyme (Fae) RGE_RS19675 PF02152 Dihydroneopterin aldolase RGE_RS19680 PF00158 Sigma-54 interaction domain RGE_RS19680 PF01590 GAF domain RGE_RS19680 PF02954 Bacterial regulatory protein, Fis family RGE_RS19685 PF02441 Flavoprotein RGE_RS19690 PF04289 Protein of unknown function (DUF447) RGE_RS19695 PF04476 RGE_RS19695 RGE_RS19700 PF00696 Amino acid kinase family RGE_RS19705 PF01968 Hydantoinase/oxoprolinase RGE_RS19710 PF02655 ATP-grasp domain RGE_RS19715 PF00977 Histidine biosynthesis protein RGE_RS19725 PF07969 Amidohydrolase family RGE_RS19730 PF01913 Formylmethanofuran-tetrahydromethanopterin formyltransferase RGE_RS19730 PF02741 FTR, proximal lobe RGE_RS19735 PF01493 GXGXG motif RGE_RS19740 PF08714 Formaldehyde-activating enzyme (Fae) RGE_RS19745 PF00425 chorismate binding enzyme RGE_RS19745 PF01063 Aminotransferase class IV RGE_RS19750 PF12710 haloacid dehalogenase-like hydrolase RGE_RS19755 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain RGE_RS19755 PF00672 HAMP domain RGE_RS19765 PF09925 RGE_RS19765 RGE_RS19770 PF00072 Response regulator receiver domain RGE_RS19770 PF00196 Bacterial regulatory proteins, luxR family RGE_RS19775 PF00672 HAMP domain RGE_RS19775 PF07730 Histidine kinase RGE_RS19780 PF00561 alpha/beta hydrolase fold RGE_RS19785 PF08042 RGE_RS19785 RGE_RS19790 PF12706 Beta-lactamase superfamily domain RGE_RS19795 PF03070 TENA/THI-4/PQQC family RGE_RS19800 PF05402 Coenzyme PQQ synthesis protein D (PqqD) RGE_RS19805 PF04055 Radical SAM superfamily RGE_RS19805 PF13186 Iron-sulfur cluster-binding domain RGE_RS19805 PF13394 4Fe-4S single cluster domain RGE_RS19810 PF00034 Cytochrome c RGE_RS19820 PF08770 Sulphur oxidation protein SoxZ RGE_RS19820 PF13501 Sulfur oxidation protein SoxY RGE_RS19825 PF00753 Metallo-beta-lactamase superfamily RGE_RS19830 PF10604 Polyketide cyclase / dehydrase and lipid transport RGE_RS19850 PF00497 Bacterial extracellular solute-binding proteins, family 3 RGE_RS19855 PF13442 Cytochrome C oxidase, cbb3-type, subunit III RGE_RS19860 PF01011 PQQ enzyme repeat RGE_RS19860 PF13360 PQQ-like domain RGE_RS19865 PF10282 Lactonase, 7-bladed beta-propeller RGE_RS19875 PF03401 Tripartite tricarboxylate transporter family receptor RGE_RS19880 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RGE_RS19880 PF07730 Histidine kinase RGE_RS19885 PF00072 Response regulator receiver domain RGE_RS19885 PF00196 Bacterial regulatory proteins, luxR family RGE_RS19890 PF00593 TonB dependent receptor RGE_RS19890 PF07715 TonB-dependent Receptor Plug Domain RGE_RS19895 PF00512 His Kinase A (phospho-acceptor) domain RGE_RS19895 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RGE_RS19900 PF02814 UreE urease accessory protein, N-terminal domain RGE_RS19900 PF05194 UreE urease accessory protein, C-terminal domain RGE_RS19905 PF01730 UreF RGE_RS19910 PF02492 CobW/HypB/UreG, nucleotide-binding domain RGE_RS19920 PF02421 Ferrous iron transport protein B RGE_RS19920 PF07664 RGE_RS19920 RGE_RS19920 PF07670 Nucleoside recognition RGE_RS19925 PF04023 FeoA domain RGE_RS19930 PF01544 CorA-like Mg2+ transporter protein RGE_RS19935 PF14375 RGE_RS19935 RGE_RS19940 PF07690 Major Facilitator Superfamily RGE_RS19945 PF13437 HlyD family secretion protein RGE_RS19945 PF13533 Biotin-lipoyl like RGE_RS19950 PF02321 Outer membrane efflux protein RGE_RS19955 PF01047 MarR family RGE_RS19960 PF02666 RGE_RS19960 RGE_RS19965 PF01343 Peptidase family S49 RGE_RS19970 PF00355 Rieske [2Fe-2S] domain RGE_RS19975 PF13419 Haloacid dehalogenase-like hydrolase RGE_RS19980 PF00849 RNA pseudouridylate synthase RGE_RS19980 PF01479 S4 domain RGE_RS19985 PF00575 S1 RNA binding domain RGE_RS19985 PF10150 Ribonuclease E/G family RGE_RS19995 PF00933 Glycosyl hydrolase family 3 N terminal domain RGE_RS20000 PF01648 4'-phosphopantetheinyl transferase superfamily RGE_RS20005 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ RGE_RS20010 PF02565 Recombination protein O C terminal RGE_RS20010 PF11967 Recombination protein O N terminal RGE_RS20015 PF01926 50S ribosome-binding GTPase RGE_RS20015 PF07650 KH domain RGE_RS20020 PF00035 Double-stranded RNA binding motif RGE_RS20020 PF14622 Ribonuclease-III-like RGE_RS20025 PF16137 RGE_RS20025 RGE_RS20030 PF00717 Peptidase S24-like RGE_RS20030 PF10502 Signal peptidase, peptidase S26 RGE_RS20035 PF00009 Elongation factor Tu GTP binding domain RGE_RS20035 PF00679 Elongation factor G C-terminus RGE_RS20035 PF03144 Elongation factor Tu domain 2 RGE_RS20035 PF06421 GTP-binding protein LepA C-terminus RGE_RS20040 PF13180 PDZ domain RGE_RS20040 PF13365 Trypsin-like peptidase domain RGE_RS20045 PF03888 MucB/RseB family RGE_RS20045 PF17188 RGE_RS20045 RGE_RS20050 PF03872 Anti sigma-E protein RseA, N-terminal domain RGE_RS20055 PF04542 Sigma-70 region 2 RGE_RS20055 PF08281 Sigma-70, region 4 RGE_RS20065 PF00109 Beta-ketoacyl synthase, N-terminal domain RGE_RS20065 PF02801 Beta-ketoacyl synthase, C-terminal domain RGE_RS20070 PF00550 Phosphopantetheine attachment site RGE_RS20075 PF13561 Enoyl-(Acyl carrier protein) reductase RGE_RS20080 PF00698 Acyl transferase domain RGE_RS20085 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal RGE_RS20085 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III RGE_RS20090 PF02504 Fatty acid synthesis protein RGE_RS20095 PF01783 Ribosomal L32p protein family RGE_RS20100 PF02620 RGE_RS20100 RGE_RS20105 PF02545 Maf-like protein RGE_RS20110 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases RGE_RS20115 PF01467 Cytidylyltransferase RGE_RS20120 PF00294 pfkB family carbohydrate kinase RGE_RS20125 PF00270 DEAD/DEAH box helicase RGE_RS20125 PF00271 Helicase conserved C-terminal domain RGE_RS20130 PF00953 Glycosyl transferase family 4 RGE_RS20135 PF02563 Polysaccharide biosynthesis/export protein RGE_RS20135 PF06251 Capsule biosynthesis GfcC RGE_RS20135 PF10531 SLBB domain RGE_RS20145 PF16363 RGE_RS20145 RGE_RS20160 PF04443 RGE_RS20160 RGE_RS20175 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase RGE_RS20180 PF00483 Nucleotidyl transferase RGE_RS20185 PF04321 RmlD substrate binding domain RGE_RS20190 PF16363 RGE_RS20190 RGE_RS20195 PF00483 Nucleotidyl transferase RGE_RS20195 PF01050 Mannose-6-phosphate isomerase RGE_RS20200 PF02719 Polysaccharide biosynthesis protein RGE_RS20200 PF13727 CoA-binding domain RGE_RS20205 PF02397 RGE_RS20205 RGE_RS20210 PF05685 Putative restriction endonuclease RGE_RS20215 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family RGE_RS20220 PF08241 Methyltransferase domain RGE_RS20225 PF13579 Glycosyl transferase 4-like domain RGE_RS20225 PF13692 Glycosyl transferases group 1 RGE_RS20230 PF00534 Glycosyl transferases group 1 RGE_RS20230 PF13579 Glycosyl transferase 4-like domain RGE_RS20235 PF00132 Bacterial transferase hexapeptide (six repeats) RGE_RS20240 PF14667 Polysaccharide biosynthesis C-terminal domain RGE_RS20245 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family RGE_RS20250 PF00132 Bacterial transferase hexapeptide (six repeats) RGE_RS20255 PF01408 Oxidoreductase family, NAD-binding Rossmann fold RGE_RS20255 PF02894 Oxidoreductase family, C-terminal alpha/beta domain RGE_RS20260 PF00152 tRNA synthetases class II (D, K and N) RGE_RS20260 PF01336 OB-fold nucleic acid binding domain RGE_RS20265 PF12766 Pyridoxamine 5'-phosphate oxidase RGE_RS20270 PF16363 RGE_RS20270 RGE_RS20275 PF01370 NAD dependent epimerase/dehydratase family RGE_RS20280 PF00378 Enoyl-CoA hydratase/isomerase family RGE_RS20285 PF11306 Protein of unknown function (DUF3108) RGE_RS20290 PF05299 M61 glycyl aminopeptidase RGE_RS20295 PF11911 RGE_RS20295 RGE_RS20300 PF10411 Disulfide bond isomerase protein N-terminus RGE_RS20300 PF13098 Thioredoxin-like domain RGE_RS20305 PF01494 FAD binding domain RGE_RS20310 PF08543 Phosphomethylpyrimidine kinase RGE_RS20315 PF02581 Thiamine monophosphate synthase/TENI RGE_RS20320 PF02110 Hydroxyethylthiazole kinase family RGE_RS20325 PF03473 MOSC domain RGE_RS20325 PF03476 MOSC N-terminal beta barrel domain RGE_RS20330 PF01926 50S ribosome-binding GTPase RGE_RS20330 PF06071 Protein of unknown function (DUF933) RGE_RS20335 PF00072 Response regulator receiver domain RGE_RS20335 PF00512 His Kinase A (phospho-acceptor) domain RGE_RS20335 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RGE_RS20335 PF03924 CHASE domain RGE_RS20335 PF05231 RGE_RS20335 RGE_RS20335 PF08447 PAS fold RGE_RS20350 PF00140 Sigma-70 factor, region 1 RGE_RS20350 PF04542 Sigma-70 region 2 RGE_RS20350 PF04545 Sigma-70, region 4 RGE_RS20355 PF02630 SCO1/SenC RGE_RS20360 PF01040 UbiA prenyltransferase family RGE_RS20365 PF02628 RGE_RS20365 RGE_RS20375 PF02104 RGE_RS20375 RGE_RS20380 PF11137 RGE_RS20380 RGE_RS20385 PF00510 Cytochrome c oxidase subunit III RGE_RS20390 PF11174 RGE_RS20390 RGE_RS20395 PF04442 Cytochrome c oxidase assembly protein CtaG/Cox11 RGE_RS20400 PF00115 Cytochrome C and Quinol oxidase polypeptide I RGE_RS20405 PF00116 Cytochrome C oxidase subunit II, periplasmic domain RGE_RS20405 PF02790 Cytochrome C oxidase subunit II, transmembrane domain RGE_RS20405 PF13442 Cytochrome C oxidase, cbb3-type, subunit III RGE_RS20410 PF13489 Methyltransferase domain RGE_RS20415 PF00156 Phosphoribosyl transferase domain RGE_RS20420 PF00588 SpoU rRNA Methylase family RGE_RS20425 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus RGE_RS20425 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus RGE_RS20430 PF02556 Preprotein translocase subunit SecB RGE_RS20435 PF00462 Glutaredoxin RGE_RS20440 PF00581 Rhodanese-like domain RGE_RS20445 PF00300 Histidine phosphatase superfamily (branch 1) RGE_RS20450 PF00156 Phosphoribosyl transferase domain RGE_RS20450 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase RGE_RS20455 PF00591 Glycosyl transferase family, a/b domain RGE_RS20455 PF02885 Glycosyl transferase family, helical bundle domain RGE_RS20455 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain RGE_RS20460 PF01553 Acyltransferase RGE_RS20465 PF07969 Amidohydrolase family RGE_RS20470 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain RGE_RS20470 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain RGE_RS20475 PF00156 Phosphoribosyl transferase domain RGE_RS20480 PF03652 Uncharacterised protein family (UPF0081) RGE_RS20485 PF02622 Uncharacterized ACR, COG1678 RGE_RS20490 PF00875 DNA photolyase RGE_RS20490 PF03441 FAD binding domain of DNA photolyase RGE_RS20495 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain RGE_RS20495 PF00672 HAMP domain RGE_RS20500 PF00990 GGDEF domain RGE_RS20505 PF00072 Response regulator receiver domain RGE_RS20505 PF01584 CheW-like domain RGE_RS20505 PF01627 Hpt domain RGE_RS20505 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RGE_RS20510 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain RGE_RS20510 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term RGE_RS20515 PF01584 CheW-like domain RGE_RS20520 PF00072 Response regulator receiver domain RGE_RS20525 PF00072 Response regulator receiver domain RGE_RS20530 PF08543 Phosphomethylpyrimidine kinase RGE_RS20535 PF00202 Aminotransferase class-III RGE_RS20540 PF00326 Prolyl oligopeptidase family RGE_RS20545 PF01225 Mur ligase family, catalytic domain RGE_RS20545 PF02875 Mur ligase family, glutamate ligase domain RGE_RS20545 PF08245 Mur ligase middle domain RGE_RS20550 PF05728 Uncharacterised protein family (UPF0227) RGE_RS20555 PF13561 Enoyl-(Acyl carrier protein) reductase RGE_RS20560 PF00773 RNB domain RGE_RS20565 PF03544 Gram-negative bacterial TonB protein C-terminal RGE_RS20570 PF01488 Shikimate / quinate 5-dehydrogenase RGE_RS20570 PF08501 Shikimate dehydrogenase substrate binding domain RGE_RS20575 PF00912 Transglycosylase RGE_RS20585 PF08534 Redoxin RGE_RS20590 PF00364 Biotin-requiring enzyme RGE_RS20595 PF00289 Carbamoyl-phosphate synthase L chain, N-terminal domain RGE_RS20595 PF02785 Biotin carboxylase C-terminal domain RGE_RS20595 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain RGE_RS20600 PF06325 Ribosomal protein L11 methyltransferase (PrmA) RGE_RS20605 PF11906 RGE_RS20605 RGE_RS20605 PF13719 RGE_RS20605 RGE_RS20610 PF00294 pfkB family carbohydrate kinase RGE_RS20620 PF00268 Ribonucleotide reductase, small chain RGE_RS20625 PF00317 Ribonucleotide reductase, all-alpha domain RGE_RS20625 PF02867 Ribonucleotide reductase, barrel domain RGE_RS20625 PF03477 ATP cone domain RGE_RS20630 PF01510 N-acetylmuramoyl-L-alanine amidase RGE_RS20635 PF00072 Response regulator receiver domain RGE_RS20635 PF00158 Sigma-54 interaction domain RGE_RS20635 PF02954 Bacterial regulatory protein, Fis family RGE_RS20640 PF00512 His Kinase A (phospho-acceptor) domain RGE_RS20640 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RGE_RS20650 PF01578 RGE_RS20650 RGE_RS20655 PF00448 SRP54-type protein, GTPase domain RGE_RS20655 PF02881 SRP54-type protein, helical bundle domain RGE_RS20655 PF02978 Signal peptide binding domain RGE_RS20660 PF00448 SRP54-type protein, GTPase domain RGE_RS20660 PF02881 SRP54-type protein, helical bundle domain RGE_RS20675 PF00919 Uncharacterized protein family UPF0004 RGE_RS20675 PF01938 TRAM domain RGE_RS20675 PF04055 Radical SAM superfamily RGE_RS20685 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain RGE_RS20685 PF01488 Shikimate / quinate 5-dehydrogenase RGE_RS20685 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain RGE_RS20690 PF00472 RF-1 domain RGE_RS20690 PF03462 PCRF domain RGE_RS20695 PF05175 Methyltransferase small domain RGE_RS20705 PF00462 Glutaredoxin RGE_RS20710 PF02441 Flavoprotein RGE_RS20715 PF01464 Transglycosylase SLT domain RGE_RS20720 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) RGE_RS20720 PF03129 Anticodon binding domain RGE_RS20720 PF04073 Aminoacyl-tRNA editing domain RGE_RS20725 PF00293 NUDIX domain RGE_RS20730 PF00696 Amino acid kinase family RGE_RS20730 PF01472 PUA domain RGE_RS20735 PF01018 GTP1/OBG RGE_RS20735 PF01926 50S ribosome-binding GTPase RGE_RS20740 PF01016 Ribosomal L27 protein RGE_RS20745 PF00829 Ribosomal prokaryotic L21 protein RGE_RS20750 PF00348 Polyprenyl synthetase RGE_RS20765 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain RGE_RS20765 PF00672 HAMP domain RGE_RS20765 PF12729 RGE_RS20765 RGE_RS20770 PF13469 Sulfotransferase family RGE_RS20775 PF02417 RGE_RS20775 RGE_RS20780 PF00437 Type II/IV secretion system protein RGE_RS20780 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain RGE_RS20785 PF00482 Type II secretion system (T2SS), protein F RGE_RS20790 PF01478 Type IV leader peptidase family RGE_RS20790 PF06750 RGE_RS20790 RGE_RS20795 PF01121 Dephospho-CoA kinase RGE_RS20800 PF07072 Protein of unknown function (DUF1342) RGE_RS20805 PF03884 Domain of unknown function (DUF329) RGE_RS20810 PF02579 Dinitrogenase iron-molybdenum cofactor RGE_RS20810 PF04055 Radical SAM superfamily RGE_RS20815 PF00037 4Fe-4S binding domain RGE_RS20820 PF01521 Iron-sulphur cluster biosynthesis RGE_RS20830 PF01816 Leucine rich repeat variant RGE_RS20830 PF05484 LRV protein FeS4 cluster RGE_RS20835 PF04319 RGE_RS20835 RGE_RS20840 PF04319 RGE_RS20840 RGE_RS20850 PF00266 Aminotransferase class-V RGE_RS20855 PF06988 NifT/FixU protein RGE_RS20865 PF13289 RGE_RS20865 RGE_RS20875 PF09723 RGE_RS20875 RGE_RS20880 PF03960 ArsC family RGE_RS20885 PF03747 ADP-ribosylglycohydrolase RGE_RS20890 PF07357 RGE_RS20890 RGE_RS20900 PF00142 4Fe-4S iron sulfur cluster binding proteins, NifH/frxC family RGE_RS20905 PF00148 Nitrogenase component 1 type Oxidoreductase RGE_RS20910 PF00148 Nitrogenase component 1 type Oxidoreductase RGE_RS20910 PF11844 Domain of unknown function (DUF3364) RGE_RS20925 PF13407 Periplasmic binding protein domain RGE_RS20930 PF00072 Response regulator receiver domain RGE_RS20930 PF00512 His Kinase A (phospho-acceptor) domain RGE_RS20930 PF00672 HAMP domain RGE_RS20930 PF01627 Hpt domain RGE_RS20930 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RGE_RS20930 PF08448 PAS fold RGE_RS20935 PF00148 Nitrogenase component 1 type Oxidoreductase RGE_RS20940 PF00148 Nitrogenase component 1 type Oxidoreductase RGE_RS20945 PF02579 Dinitrogenase iron-molybdenum cofactor RGE_RS20950 PF03270 Protein of unknown function, DUF269 RGE_RS20955 PF05082 Rop-like RGE_RS20960 PF14697 4Fe-4S dicluster domain RGE_RS20965 PF04891 RGE_RS20965 RGE_RS20980 PF00266 Aminotransferase class-V RGE_RS20985 PF01592 NifU-like N terminal domain RGE_RS20990 PF01521 Iron-sulphur cluster biosynthesis RGE_RS20995 PF01521 Iron-sulphur cluster biosynthesis RGE_RS21000 PF00012 Hsp70 protein RGE_RS21005 PF00111 2Fe-2S iron-sulfur cluster binding domain RGE_RS21010 PF00682 HMGL-like RGE_RS21015 PF03206 RGE_RS21015 RGE_RS21020 PF01012 Electron transfer flavoprotein domain RGE_RS21025 PF00766 Electron transfer flavoprotein FAD-binding domain RGE_RS21025 PF01012 Electron transfer flavoprotein domain RGE_RS21030 PF01494 FAD binding domain RGE_RS21035 PF05187 Electron transfer flavoprotein-ubiquinone oxidoreductase RGE_RS21040 PF13668 Ferritin-like domain RGE_RS21045 PF00158 Sigma-54 interaction domain RGE_RS21045 PF01590 GAF domain RGE_RS21045 PF02954 Bacterial regulatory protein, Fis family RGE_RS21050 PF00166 Chaperonin 10 Kd subunit RGE_RS21055 PF00118 TCP-1/cpn60 chaperonin family RGE_RS21060 PF07793 RGE_RS21060 RGE_RS21065 PF01926 50S ribosome-binding GTPase RGE_RS21070 PF00034 Cytochrome c RGE_RS21075 PF00174 Oxidoreductase molybdopterin binding domain RGE_RS21080 PF01794 RGE_RS21080 RGE_RS21085 PF00005 ABC transporter RGE_RS21090 PF13458 Periplasmic binding protein RGE_RS21095 PF10605 RGE_RS21095 RGE_RS21100 PF03401 Tripartite tricarboxylate transporter family receptor RGE_RS21105 PF00501 AMP-binding enzyme RGE_RS21105 PF13193 AMP-binding enzyme C-terminal domain RGE_RS21110 PF01883 Domain of unknown function DUF59 RGE_RS21115 PF00083 Sugar (and other) transporter RGE_RS21120 PF00929 Exonuclease RGE_RS21125 PF00072 Response regulator receiver domain RGE_RS21130 PF00571 CBS domain RGE_RS21130 PF03445 RGE_RS21130 RGE_RS21130 PF10335 RGE_RS21130 RGE_RS21135 PF00474 Sodium:solute symporter family RGE_RS21140 PF04341 RGE_RS21140 RGE_RS21145 PF01323 DSBA-like thioredoxin domain RGE_RS21150 PF06945 RGE_RS21150 RGE_RS21155 PF04073 Aminoacyl-tRNA editing domain RGE_RS21160 PF00682 HMGL-like RGE_RS21165 PF00289 Carbamoyl-phosphate synthase L chain, N-terminal domain RGE_RS21165 PF00364 Biotin-requiring enzyme RGE_RS21165 PF02785 Biotin carboxylase C-terminal domain RGE_RS21165 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain RGE_RS21170 PF13548 RGE_RS21170 RGE_RS21175 PF00378 Enoyl-CoA hydratase/isomerase family RGE_RS21180 PF05163 DinB family RGE_RS21185 PF01039 Carboxyl transferase domain RGE_RS21195 PF02386 Cation transport protein RGE_RS21200 PF02080 TrkA-C domain RGE_RS21200 PF02254 TrkA-N domain RGE_RS21205 PF01926 50S ribosome-binding GTPase RGE_RS21205 PF11981 RGE_RS21205 RGE_RS21210 PF11067 RGE_RS21210 RGE_RS21215 PF01575 MaoC like domain RGE_RS21220 PF00108 Thiolase, N-terminal domain RGE_RS21220 PF02803 Thiolase, C-terminal domain RGE_RS21225 PF06315 Isocitrate dehydrogenase kinase/phosphatase (AceK) RGE_RS21230 PF00484 Carbonic anhydrase RGE_RS21235 PF00441 Acyl-CoA dehydrogenase, C-terminal domain RGE_RS21235 PF02770 Acyl-CoA dehydrogenase, middle domain RGE_RS21235 PF02771 Acyl-CoA dehydrogenase, N-terminal domain RGE_RS21240 PF00376 MerR family regulatory protein RGE_RS21240 PF09278 MerR, DNA binding RGE_RS21245 PF01863 Protein of unknown function DUF45 RGE_RS21250 PF00392 Bacterial regulatory proteins, gntR family RGE_RS21250 PF07729 FCD domain RGE_RS21255 PF00528 Binding-protein-dependent transport system inner membrane component RGE_RS21260 PF00528 Binding-protein-dependent transport system inner membrane component RGE_RS21265 PF13416 Bacterial extracellular solute-binding protein RGE_RS21270 PF00005 ABC transporter RGE_RS21270 PF08402 TOBE domain RGE_RS21275 PF01177 Asp/Glu/Hydantoin racemase RGE_RS21280 PF01553 Acyltransferase RGE_RS21285 PF13242 HAD-hyrolase-like RGE_RS21290 PF02092 RGE_RS21290 RGE_RS21290 PF05746 DALR anticodon binding domain RGE_RS21295 PF02091 Glycyl-tRNA synthetase alpha subunit RGE_RS21300 PF00795 Carbon-nitrogen hydrolase RGE_RS21305 PF00571 CBS domain RGE_RS21305 PF03471 Transporter associated domain RGE_RS21310 PF02492 CobW/HypB/UreG, nucleotide-binding domain RGE_RS21310 PF07683 Cobalamin synthesis protein cobW C-terminal domain RGE_RS21315 PF01258 Prokaryotic dksA/traR C4-type zinc finger RGE_RS21325 PF00227 Proteasome subunit RGE_RS21330 PF00004 ATPase family associated with various cellular activities (AAA) RGE_RS21330 PF07724 AAA domain (Cdc48 subfamily) RGE_RS21330 PF10431 C-terminal, D2-small domain, of ClpB protein RGE_RS21335 PF03309 Type III pantothenate kinase RGE_RS21340 PF01642 Methylmalonyl-CoA mutase RGE_RS21340 PF02310 B12 binding domain RGE_RS21340 PF03308 ArgK protein RGE_RS21345 PF01845 CcdB protein RGE_RS21350 PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system RGE_RS21355 PF00990 GGDEF domain RGE_RS21360 PF01048 Phosphorylase superfamily RGE_RS21360 PF10423 Bacterial AMP nucleoside phosphorylase N-terminus RGE_RS21365 PF02321 Outer membrane efflux protein RGE_RS21370 PF16576 RGE_RS21370 RGE_RS21375 PF00005 ABC transporter RGE_RS21380 PF02687 RGE_RS21380 RGE_RS21380 PF12704 MacB-like periplasmic core domain RGE_RS21385 PF07690 Major Facilitator Superfamily RGE_RS21390 PF00009 Elongation factor Tu GTP binding domain RGE_RS21390 PF00679 Elongation factor G C-terminus RGE_RS21390 PF03764 Elongation factor G, domain IV RGE_RS21390 PF14492 Elongation Factor G, domain II RGE_RS21395 PF03741 RGE_RS21395 RGE_RS21400 PF03544 Gram-negative bacterial TonB protein C-terminal RGE_RS21405 PF00593 TonB dependent receptor RGE_RS21405 PF07715 TonB-dependent Receptor Plug Domain RGE_RS21410 PF13640 2OG-Fe(II) oxygenase superfamily RGE_RS21415 PF01070 FMN-dependent dehydrogenase RGE_RS21430 PF08668 HDOD domain RGE_RS21435 PF01037 AsnC family RGE_RS21435 PF13412 Winged helix-turn-helix DNA-binding RGE_RS21440 PF00351 Biopterin-dependent aromatic amino acid hydroxylase RGE_RS21445 PF12697 Alpha/beta hydrolase family RGE_RS21455 PF00753 Metallo-beta-lactamase superfamily RGE_RS21485 PF00391 PEP-utilising enzyme, mobile domain RGE_RS21485 PF02896 PEP-utilising enzyme, TIM barrel domain RGE_RS21485 PF05524 PEP-utilising enzyme, N-terminal RGE_RS21490 PF00381 PTS HPr component phosphorylation site RGE_RS21495 PF03610 PTS system fructose IIA component RGE_RS21500 PF02515 CoA-transferase family III RGE_RS21505 PF13852 RGE_RS21505 RGE_RS21510 PF04055 Radical SAM superfamily RGE_RS21510 PF16881 RGE_RS21510 RGE_RS21515 PF03099 Biotin/lipoate A/B protein ligase family RGE_RS21520 PF04359 Protein of unknown function (DUF493) RGE_RS21525 PF01063 Aminotransferase class IV RGE_RS21530 PF00768 D-alanyl-D-alanine carboxypeptidase RGE_RS21530 PF07943 Penicillin-binding protein 5, C-terminal domain RGE_RS21535 PF12146 Putative lysophospholipase RGE_RS21540 PF01257 Thioredoxin-like [2Fe-2S] ferredoxin RGE_RS21545 PF04892 RGE_RS21545 RGE_RS21550 PF03653 RGE_RS21550 RGE_RS21555 PF00490 Delta-aminolevulinic acid dehydratase RGE_RS21560 PF01544 CorA-like Mg2+ transporter protein RGE_RS21565 PF00892 EamA-like transporter family RGE_RS21570 PF02130 Uncharacterized protein family UPF0054 RGE_RS21575 PF02562 PhoH-like protein RGE_RS21580 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RGE_RS21585 PF00072 Response regulator receiver domain RGE_RS21585 PF00196 Bacterial regulatory proteins, luxR family RGE_RS21590 PF01330 RuvA N terminal domain RGE_RS21590 PF07499 RuvA, C-terminal domain RGE_RS21590 PF14520 Helix-hairpin-helix domain RGE_RS21595 PF04314 Protein of unknown function (DUF461) RGE_RS21600 PF05491 Holliday junction DNA helicase ruvB C-terminus RGE_RS21600 PF05496 Holliday junction DNA helicase ruvB N-terminus RGE_RS21605 PF13633 Prokaryotic N-terminal methylation site RGE_RS21610 PF12019 Type II transport protein GspH RGE_RS21610 PF13544 RGE_RS21610 RGE_RS21620 PF16074 RGE_RS21620 RGE_RS21630 PF05567 Neisseria PilC beta-propeller domain RGE_RS21635 PF00300 Histidine phosphatase superfamily (branch 1) RGE_RS21640 PF01161 Phosphatidylethanolamine-binding protein RGE_RS21645 PF08895 RGE_RS21645 RGE_RS21650 PF02353 Mycolic acid cyclopropane synthetase RGE_RS21655 PF00563 EAL domain RGE_RS21655 PF00990 GGDEF domain RGE_RS21655 PF13188 PAS domain RGE_RS21655 PF13426 PAS domain RGE_RS21660 PF11871 RGE_RS21660 RGE_RS21660 PF13487 HD domain RGE_RS21665 PF12086 RGE_RS21665 RGE_RS21670 PF01694 Rhomboid family RGE_RS21675 PF04381 Putative exonuclease, RdgC RGE_RS21680 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain RGE_RS21680 PF07685 CobB/CobQ-like glutamine amidotransferase domain RGE_RS21685 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain RGE_RS21685 PF07685 CobB/CobQ-like glutamine amidotransferase domain RGE_RS21690 PF04071 RGE_RS21690 RGE_RS21695 PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase RGE_RS21700 PF12821 RGE_RS21700 RGE_RS21705 PF06738 RGE_RS21705 RGE_RS21710 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain RGE_RS21710 PF17200 RGE_RS21710 RGE_RS21715 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain RGE_RS21715 PF17200 RGE_RS21715 RGE_RS21720 PF07589 RGE_RS21720 RGE_RS21725 PF07845 RGE_RS21725 RGE_RS21730 PF13519 von Willebrand factor type A domain RGE_RS21735 PF07728 AAA domain (dynein-related subfamily) RGE_RS21740 PF02514 RGE_RS21740 RGE_RS21745 PF02492 CobW/HypB/UreG, nucleotide-binding domain RGE_RS21745 PF07683 Cobalamin synthesis protein cobW C-terminal domain RGE_RS21750 PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP RGE_RS21755 PF01891 Cobalt uptake substrate-specific transmembrane region RGE_RS21765 PF00593 TonB dependent receptor RGE_RS21765 PF07715 TonB-dependent Receptor Plug Domain RGE_RS21770 PF01497 Periplasmic binding protein RGE_RS21775 PF01032 FecCD transport family RGE_RS21780 PF00005 ABC transporter RGE_RS21795 PF00072 Response regulator receiver domain RGE_RS21795 PF02954 Bacterial regulatory protein, Fis family RGE_RS21800 PF00512 His Kinase A (phospho-acceptor) domain RGE_RS21800 PF00672 HAMP domain RGE_RS21800 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RGE_RS21800 PF12860 RGE_RS21800 RGE_RS21805 PF14334 RGE_RS21805 RGE_RS21810 PF01189 NOL1/NOP2/sun family RGE_RS21815 PF01227 GTP cyclohydrolase I RGE_RS21820 PF04940 Sensors of blue-light using FAD RGE_RS21825 PF04011 LemA family RGE_RS21830 PF00171 Aldehyde dehydrogenase family RGE_RS21835 PF01037 AsnC family RGE_RS21835 PF13412 Winged helix-turn-helix DNA-binding RGE_RS21840 PF01810 RGE_RS21840 RGE_RS21845 PF02594 Uncharacterised ACR, YggU family COG1872 RGE_RS21850 PF01131 DNA topoisomerase RGE_RS21850 PF01751 Toprim domain RGE_RS21850 PF13342 RGE_RS21850 RGE_RS21855 PF00856 SET domain RGE_RS21860 PF03099 Biotin/lipoate A/B protein ligase family RGE_RS21870 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain RGE_RS21870 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain RGE_RS21875 PF00456 Transketolase, thiamine diphosphate binding domain RGE_RS21875 PF02779 Transketolase, pyrimidine binding domain RGE_RS21875 PF02780 Transketolase, C-terminal domain RGE_RS21880 PF00483 Nucleotidyl transferase RGE_RS21885 PF00248 Aldo/keto reductase family RGE_RS21890 PF00300 Histidine phosphatase superfamily (branch 1) RGE_RS21895 PF01494 FAD binding domain RGE_RS21900 PF00795 Carbon-nitrogen hydrolase RGE_RS21905 PF03710 Glutamate-ammonia ligase adenylyltransferase RGE_RS21905 PF08335 GlnD PII-uridylyltransferase RGE_RS21910 PF00892 EamA-like transporter family RGE_RS21915 PF13231 RGE_RS21915 RGE_RS21920 PF00535 Glycosyl transferase family 2 RGE_RS21925 PF03706 RGE_RS21925 RGE_RS21935 PF02310 B12 binding domain RGE_RS21935 PF02607 B12 binding domain RGE_RS21935 PF13411 MerR HTH family regulatory protein RGE_RS21940 PF01593 Flavin containing amine oxidoreductase RGE_RS21945 PF07103 RGE_RS21945 RGE_RS21950 PF02353 Mycolic acid cyclopropane synthetase RGE_RS21955 PF16036 RGE_RS21955 RGE_RS21960 PF13347 MFS/sugar transport protein RGE_RS21965 PF12915 RGE_RS21965 RGE_RS21970 PF00106 short chain dehydrogenase RGE_RS21975 PF12680 SnoaL-like domain RGE_RS21985 PF01544 CorA-like Mg2+ transporter protein RGE_RS21990 PF00512 His Kinase A (phospho-acceptor) domain RGE_RS21990 PF00672 HAMP domain RGE_RS21990 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RGE_RS21990 PF13188 PAS domain RGE_RS21990 PF13426 PAS domain RGE_RS21995 PF00072 Response regulator receiver domain RGE_RS22005 PF00326 Prolyl oligopeptidase family RGE_RS22005 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain RGE_RS22010 PF00072 Response regulator receiver domain RGE_RS22010 PF01627 Hpt domain RGE_RS22015 PF00072 Response regulator receiver domain RGE_RS22015 PF12728 Helix-turn-helix domain RGE_RS22020 PF01966 HD domain RGE_RS22025 PF00512 His Kinase A (phospho-acceptor) domain RGE_RS22025 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RGE_RS22025 PF08448 PAS fold RGE_RS22030 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein RGE_RS22035 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 RGE_RS22040 PF02603 HPr Serine kinase N terminus RGE_RS22040 PF07475 HPr Serine kinase C-terminal domain RGE_RS22045 PF01475 Ferric uptake regulator family RGE_RS22050 PF04355 SmpA / OmlA family RGE_RS22055 PF01113 Dihydrodipicolinate reductase, N-terminus RGE_RS22055 PF05173 Dihydrodipicolinate reductase, C-terminus RGE_RS22060 PF01618 RGE_RS22060 RGE_RS22065 PF02472 Biopolymer transport protein ExbD/TolR RGE_RS22070 PF00133 tRNA synthetases class I (I, L, M and V) RGE_RS22070 PF08264 Anticodon-binding domain of tRNA RGE_RS22070 PF09334 tRNA synthetases class I (M) RGE_RS22070 PF13603 Leucyl-tRNA synthetase, Domain 2 RGE_RS22075 PF04390 Lipopolysaccharide-assembly RGE_RS22080 PF06144 DNA polymerase III, delta subunit RGE_RS22085 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain RGE_RS22090 PF02464 Competence-damaged protein RGE_RS22095 PF04608 Phosphatidylglycerophosphatase A RGE_RS22100 PF00586 AIR synthase related protein, N-terminal domain RGE_RS22100 PF02769 AIR synthase related protein, C-terminal domain RGE_RS22105 PF00072 Response regulator receiver domain RGE_RS22105 PF00196 Bacterial regulatory proteins, luxR family RGE_RS22110 PF00512 His Kinase A (phospho-acceptor) domain RGE_RS22110 PF00989 PAS fold RGE_RS22110 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RGE_RS22115 PF00390 Malic enzyme, N-terminal domain RGE_RS22115 PF01515 Phosphate acetyl/butaryl transferase RGE_RS22115 PF03949 Malic enzyme, NAD binding domain RGE_RS22115 PF12434 RGE_RS22115 RGE_RS22120 PF00545 ribonuclease RGE_RS22125 PF01337 Barstar (barnase inhibitor) RGE_RS22130 PF00398 Ribosomal RNA adenine dimethylase RGE_RS22135 PF09312 SurA N-terminal domain RGE_RS22135 PF13616 PPIC-type PPIASE domain RGE_RS22140 PF04453 Organic solvent tolerance protein RGE_RS22145 PF01636 Phosphotransferase enzyme family RGE_RS22150 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RGE_RS22150 PF03466 LysR substrate binding domain RGE_RS22155 PF01546 Peptidase family M20/M25/M40 RGE_RS22155 PF07687 Peptidase dimerisation domain RGE_RS22160 PF00378 Enoyl-CoA hydratase/isomerase family RGE_RS22165 PF02515 CoA-transferase family III RGE_RS22170 PF07021 Methionine biosynthesis protein MetW RGE_RS22175 PF00561 alpha/beta hydrolase fold RGE_RS22180 PF12833 Helix-turn-helix domain RGE_RS22185 PF13520 Amino acid permease RGE_RS22190 PF06751 Ethanolamine ammonia lyase large subunit (EutB) RGE_RS22195 PF05985 Ethanolamine ammonia-lyase light chain (EutC) RGE_RS22200 PF13410 Glutathione S-transferase, C-terminal domain RGE_RS22200 PF13417 Glutathione S-transferase, N-terminal domain RGE_RS22205 PF07969 Amidohydrolase family RGE_RS22210 PF14681 Uracil phosphoribosyltransferase RGE_RS22215 PF07958 RGE_RS22215 RGE_RS22220 PF00925 GTP cyclohydrolase II RGE_RS22220 PF12471 RGE_RS22220 RGE_RS22225 PF00593 TonB dependent receptor RGE_RS22225 PF07715 TonB-dependent Receptor Plug Domain RGE_RS22230 PF02608 Basic membrane protein RGE_RS22235 PF04055 Radical SAM superfamily RGE_RS22235 PF13353 4Fe-4S single cluster domain RGE_RS22245 PF00962 Adenosine/AMP deaminase RGE_RS22250 PF02608 Basic membrane protein RGE_RS22255 PF00005 ABC transporter RGE_RS22260 PF02653 RGE_RS22260 RGE_RS22265 PF02653 RGE_RS22265 RGE_RS22270 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region RGE_RS22275 PF01048 Phosphorylase superfamily RGE_RS22280 PF00497 Bacterial extracellular solute-binding proteins, family 3 RGE_RS22290 PF01381 Helix-turn-helix RGE_RS22310 PF01548 RGE_RS22310 RGE_RS22310 PF02371 RGE_RS22310 RGE_RS22315 PF01791 DeoC/LacD family aldolase RGE_RS22320 PF00149 Calcineurin-like phosphoesterase RGE_RS22320 PF02872 5'-nucleotidase, C-terminal domain RGE_RS22325 PF00591 Glycosyl transferase family, a/b domain RGE_RS22325 PF02885 Glycosyl transferase family, helical bundle domain RGE_RS22325 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain RGE_RS22330 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase RGE_RS22335 PF02653 RGE_RS22335 RGE_RS22340 PF02653 RGE_RS22340 RGE_RS22345 PF00005 ABC transporter RGE_RS22350 PF12412 RGE_RS22350 RGE_RS22360 PF02608 Basic membrane protein RGE_RS22365 PF02310 B12 binding domain RGE_RS22365 PF04055 Radical SAM superfamily RGE_RS22370 PF02830 V4R domain RGE_RS22375 PF00206 Lyase RGE_RS22375 PF08328 Adenylosuccinate lyase C-terminal RGE_RS22380 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family RGE_RS22390 PF00246 Zinc carboxypeptidase RGE_RS22395 PF13230 Glutamine amidotransferases class-II RGE_RS22400 PF01494 FAD binding domain RGE_RS22405 PF01258 Prokaryotic dksA/traR C4-type zinc finger RGE_RS22410 PF01274 Malate synthase RGE_RS22415 PF13419 Haloacid dehalogenase-like hydrolase RGE_RS22420 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RGE_RS22420 PF03466 LysR substrate binding domain RGE_RS22425 PF07769 RGE_RS22425 RGE_RS22430 PF04545 Sigma-70, region 4 RGE_RS22435 PF00027 Cyclic nucleotide-binding domain RGE_RS22435 PF00069 Protein kinase domain RGE_RS22440 PF00750 tRNA synthetases class I (R) RGE_RS22440 PF03485 Arginyl tRNA synthetase N terminal domain RGE_RS22440 PF05746 DALR anticodon binding domain RGE_RS22445 PF05036 Sporulation related domain RGE_RS22450 PF01323 DSBA-like thioredoxin domain RGE_RS22455 PF03968 OstA-like protein RGE_RS22460 PF00005 ABC transporter RGE_RS22460 PF12399 Branched-chain amino acid ATP-binding cassette transporter RGE_RS22465 PF00309 RGE_RS22465 RGE_RS22465 PF04552 Sigma-54, DNA binding domain RGE_RS22465 PF04963 Sigma-54 factor, core binding domain RGE_RS22470 PF01170 Putative RNA methylase family UPF0020 RGE_RS22470 PF02926 THUMP domain RGE_RS22475 PF01323 DSBA-like thioredoxin domain RGE_RS22480 PF01425 Amidase RGE_RS22485 PF04452 RNA methyltransferase RGE_RS22495 PF00501 AMP-binding enzyme RGE_RS22495 PF13193 AMP-binding enzyme C-terminal domain RGE_RS22500 PF02233 NAD(P) transhydrogenase beta subunit RGE_RS22505 PF12769 Domain of unknown function (DUF3814) RGE_RS22510 PF01262 Alanine dehydrogenase/PNT, C-terminal domain RGE_RS22510 PF05222 Alanine dehydrogenase/PNT, N-terminal domain RGE_RS22515 PF00293 NUDIX domain RGE_RS22520 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain RGE_RS22520 PF08447 PAS fold RGE_RS22525 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RGE_RS22525 PF03466 LysR substrate binding domain RGE_RS22535 PF00313 'Cold-shock' DNA-binding domain RGE_RS22535 PF06961 RGE_RS22535 RGE_RS22540 PF00005 ABC transporter RGE_RS22540 PF12857 RGE_RS22540 RGE_RS22545 PF00528 Binding-protein-dependent transport system inner membrane component RGE_RS22550 PF00528 Binding-protein-dependent transport system inner membrane component RGE_RS22555 PF13531 Bacterial extracellular solute-binding protein RGE_RS22560 PF12697 Alpha/beta hydrolase family RGE_RS22565 PF00300 Histidine phosphatase superfamily (branch 1) RGE_RS22570 PF01447 Thermolysin metallopeptidase, catalytic domain RGE_RS22570 PF02868 Thermolysin metallopeptidase, alpha-helical domain RGE_RS22570 PF07504 Fungalysin/Thermolysin Propeptide Motif RGE_RS22575 PF03595 Voltage-dependent anion channel RGE_RS22580 PF02583 Metal-sensitive transcriptional repressor RGE_RS22585 PF11127 Protein of unknown function (DUF2892) RGE_RS22590 PF00873 AcrB/AcrD/AcrF family RGE_RS22595 PF13533 Biotin-lipoyl like RGE_RS22605 PF00293 NUDIX domain RGE_RS22610 PF00436 Single-strand binding protein family RGE_RS22615 PF00270 DEAD/DEAH box helicase RGE_RS22615 PF00271 Helicase conserved C-terminal domain RGE_RS22615 PF00570 HRDC domain RGE_RS22615 PF09382 RQC domain RGE_RS22615 PF16124 RGE_RS22615 RGE_RS22620 PF01339 CheB methylesterase RGE_RS22620 PF01739 CheR methyltransferase, SAM binding domain RGE_RS22620 PF03705 CheR methyltransferase, all-alpha domain RGE_RS22620 PF08448 PAS fold RGE_RS22620 PF13596 PAS domain RGE_RS22625 PF00512 His Kinase A (phospho-acceptor) domain RGE_RS22625 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RGE_RS22625 PF13426 PAS domain RGE_RS22640 PF02201 SWIB/MDM2 domain RGE_RS22645 PF04020 RGE_RS22645 RGE_RS22650 PF01435 Peptidase family M48 RGE_RS22655 PF01967 MoaC family RGE_RS22660 PF04932 RGE_RS22660 RGE_RS22660 PF11846 RGE_RS22660 RGE_RS22660 PF15864 RGE_RS22660 RGE_RS22665 PF04932 RGE_RS22665 RGE_RS22665 PF11846 RGE_RS22665 RGE_RS22665 PF15864 RGE_RS22665 RGE_RS22670 PF00114 Pilin (bacterial filament) RGE_RS22670 PF13633 Prokaryotic N-terminal methylation site RGE_RS22675 PF12706 Beta-lactamase superfamily domain RGE_RS22680 PF00498 FHA domain RGE_RS22685 PF13672 Protein phosphatase 2C RGE_RS22690 PF00069 Protein kinase domain RGE_RS22700 PF03741 RGE_RS22700 RGE_RS22705 PF03741 RGE_RS22705 RGE_RS22710 PF00892 EamA-like transporter family RGE_RS22715 PF00549 CoA-ligase RGE_RS22715 PF02629 CoA binding domain RGE_RS22720 PF00549 CoA-ligase RGE_RS22720 PF08442 ATP-grasp domain RGE_RS22725 PF11136 RGE_RS22725 RGE_RS22730 PF02631 RecX family RGE_RS22735 PF00154 recA bacterial DNA recombination protein RGE_RS22740 PF00072 Response regulator receiver domain RGE_RS22740 PF00486 Transcriptional regulatory protein, C terminal RGE_RS22745 PF00512 His Kinase A (phospho-acceptor) domain RGE_RS22745 PF00672 HAMP domain RGE_RS22745 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RGE_RS22745 PF08521 RGE_RS22745 RGE_RS22750 PF01098 RGE_RS22750 RGE_RS22755 PF00905 Penicillin binding protein transpeptidase domain RGE_RS22755 PF03717 Penicillin-binding Protein dimerisation domain RGE_RS22760 PF04093 RGE_RS22760 RGE_RS22765 PF04085 rod shape-determining protein MreC RGE_RS22770 PF06723 MreB/Mbl protein RGE_RS22775 PF02686 Glu-tRNAGln amidotransferase C subunit RGE_RS22780 PF01425 Amidase RGE_RS22785 PF02637 GatB domain RGE_RS22785 PF02934 GatB/GatE catalytic domain RGE_RS22795 PF00156 Phosphoribosyl transferase domain RGE_RS22800 PF03372 Endonuclease/Exonuclease/phosphatase family RGE_RS22805 PF00196 Bacterial regulatory proteins, luxR family RGE_RS22810 PF01435 Peptidase family M48 RGE_RS22815 PF07690 Major Facilitator Superfamily RGE_RS22820 PF00085 Thioredoxin RGE_RS22830 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle RGE_RS22835 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle RGE_RS22840 PF00528 Binding-protein-dependent transport system inner membrane component RGE_RS22845 PF00528 Binding-protein-dependent transport system inner membrane component RGE_RS22845 PF12911 RGE_RS22845 RGE_RS22850 PF00005 ABC transporter RGE_RS22850 PF08352 Oligopeptide/dipeptide transporter, C-terminal region RGE_RS22855 PF00856 SET domain RGE_RS22860 PF03054 tRNA methyl transferase RGE_RS22865 PF00529 HlyD family secretion protein RGE_RS22865 PF16576 RGE_RS22865 RGE_RS22870 PF00005 ABC transporter RGE_RS22875 PF02687 RGE_RS22875 RGE_RS22875 PF12704 MacB-like periplasmic core domain RGE_RS22880 PF02687 RGE_RS22880 RGE_RS22880 PF12704 MacB-like periplasmic core domain RGE_RS22885 PF00501 AMP-binding enzyme RGE_RS22890 PF08668 HDOD domain RGE_RS22895 PF00732 GMC oxidoreductase RGE_RS22895 PF05199 GMC oxidoreductase RGE_RS22900 PF01914 RGE_RS22900 RGE_RS22910 PF00106 short chain dehydrogenase RGE_RS22915 PF06835 Lipopolysaccharide-assembly, LptC-related RGE_RS22920 PF08282 haloacid dehalogenase-like hydrolase RGE_RS22925 PF00571 CBS domain RGE_RS22925 PF01380 SIS domain RGE_RS22930 PF00999 Sodium/hydrogen exchanger family RGE_RS22930 PF02080 TrkA-C domain RGE_RS22930 PF02254 TrkA-N domain RGE_RS22935 PF00156 Phosphoribosyl transferase domain RGE_RS22940 PF00326 Prolyl oligopeptidase family RGE_RS22940 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain RGE_RS22945 PF01926 50S ribosome-binding GTPase RGE_RS22945 PF10396 GTP-binding protein TrmE N-terminus RGE_RS22945 PF12631 Catalytic cysteine-containing C-terminus of GTPase, MnmE RGE_RS22950 PF02096 60Kd inner membrane protein RGE_RS22950 PF14849 YidC periplasmic domain RGE_RS22955 PF01809 RGE_RS22955 RGE_RS22960 PF00825 Ribonuclease P RGE_RS22965 PF00468 Ribosomal protein L34 RGE_RS22985 PF13578 Methyltransferase domain RGE_RS22990 PF13560 Helix-turn-helix domain RGE_RS22995 PF06314 Acetoacetate decarboxylase (ADC) RGE_RS23000 PF12625 RGE_RS23000 RGE_RS23000 PF12833 Helix-turn-helix domain RGE_RS23005 PF00990 GGDEF domain RGE_RS23005 PF13185 GAF domain RGE_RS23010 PF00583 Acetyltransferase (GNAT) family RGE_RS23010 PF13673 Acetyltransferase (GNAT) domain RGE_RS23015 PF12833 Helix-turn-helix domain RGE_RS23020 PF13471 RGE_RS23020 RGE_RS23025 PF12833 Helix-turn-helix domain RGE_RS23025 PF14525 RGE_RS23025 RGE_RS23030 PF01734 Patatin-like phospholipase RGE_RS23035 PF07589 RGE_RS23035 RGE_RS23040 PF14870 Photosynthesis system II assembly factor YCF48 RGE_RS23050 PF12833 Helix-turn-helix domain RGE_RS23060 PF08241 Methyltransferase domain RGE_RS23065 PF13424 Tetratricopeptide repeat RGE_RS23070 PF00583 Acetyltransferase (GNAT) family RGE_RS23075 PF04230 RGE_RS23075 RGE_RS23080 PF11927 RGE_RS23080 RGE_RS23090 PF00440 Bacterial regulatory proteins, tetR family RGE_RS23095 PF00072 Response regulator receiver domain RGE_RS23095 PF00512 His Kinase A (phospho-acceptor) domain RGE_RS23095 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RGE_RS23095 PF08447 PAS fold RGE_RS23105 PF00777 Glycosyltransferase family 29 (sialyltransferase) RGE_RS23105 PF08241 Methyltransferase domain RGE_RS23105 PF13489 Methyltransferase domain RGE_RS23110 PF00535 Glycosyl transferase family 2 RGE_RS23110 PF02709 N-terminal domain of galactosyltransferase RGE_RS23115 PF05212 RGE_RS23115 RGE_RS23120 PF07568 RGE_RS23120 RGE_RS23120 PF08448 PAS fold RGE_RS23120 PF13188 PAS domain RGE_RS23120 PF13426 PAS domain RGE_RS23125 PF00512 His Kinase A (phospho-acceptor) domain RGE_RS23125 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RGE_RS23130 PF05935 Arylsulfotransferase (ASST) RGE_RS23135 PF00672 HAMP domain RGE_RS23135 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RGE_RS23140 PF00691 OmpA family RGE_RS23145 PF00583 Acetyltransferase (GNAT) family RGE_RS23150 PF02120 Flagellar hook-length control protein FliK RGE_RS23170 PF00072 Response regulator receiver domain RGE_RS23170 PF00563 EAL domain RGE_RS23175 PF00990 GGDEF domain RGE_RS23180 PF04314 Protein of unknown function (DUF461) RGE_RS23185 PF00563 EAL domain RGE_RS23185 PF00990 GGDEF domain RGE_RS23190 PF00072 Response regulator receiver domain RGE_RS23190 PF00512 His Kinase A (phospho-acceptor) domain RGE_RS23190 PF00989 PAS fold RGE_RS23190 PF01627 Hpt domain RGE_RS23190 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RGE_RS23190 PF08448 PAS fold RGE_RS23190 PF13188 PAS domain RGE_RS23195 PF00072 Response regulator receiver domain RGE_RS23195 PF00512 His Kinase A (phospho-acceptor) domain RGE_RS23195 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RGE_RS23195 PF08448 PAS fold RGE_RS23200 PF00512 His Kinase A (phospho-acceptor) domain RGE_RS23200 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RGE_RS23205 PF00072 Response regulator receiver domain RGE_RS23210 PF00072 Response regulator receiver domain RGE_RS23210 PF00512 His Kinase A (phospho-acceptor) domain RGE_RS23210 PF01627 Hpt domain RGE_RS23210 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RGE_RS23210 PF08448 PAS fold RGE_RS23210 PF13188 PAS domain RGE_RS23220 PF00072 Response regulator receiver domain RGE_RS23220 PF00672 HAMP domain RGE_RS23220 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RGE_RS23225 PF12625 RGE_RS23225 RGE_RS23225 PF12833 Helix-turn-helix domain RGE_RS23240 PF11876 RGE_RS23240 RGE_RS23245 PF11740 RGE_RS23245 RGE_RS23250 PF04972 BON domain RGE_RS23260 PF13489 Methyltransferase domain RGE_RS23265 PF00990 GGDEF domain RGE_RS23270 PF00589 Phage integrase family RGE_RS23275 PF13663 RGE_RS23275 RGE_RS23285 PF00072 Response regulator receiver domain RGE_RS23285 PF00512 His Kinase A (phospho-acceptor) domain RGE_RS23285 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RGE_RS23285 PF08447 PAS fold RGE_RS23285 PF08448 PAS fold RGE_RS23285 PF13188 PAS domain RGE_RS23285 PF13426 PAS domain RGE_RS23290 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases RGE_RS23290 PF00990 GGDEF domain RGE_RS23305 PF00583 Acetyltransferase (GNAT) family RGE_RS23310 PF04965 Gene 25-like lysozyme RGE_RS23315 PF13795 RGE_RS23315 RGE_RS23320 PF01738 Dienelactone hydrolase family RGE_RS23320 PF13650 Aspartyl protease RGE_RS23325 PF16867 RGE_RS23325 RGE_RS23330 PF01266 FAD dependent oxidoreductase RGE_RS23335 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain RGE_RS23340 PF04138 RGE_RS23340 RGE_RS23345 PF00072 Response regulator receiver domain RGE_RS23345 PF00512 His Kinase A (phospho-acceptor) domain RGE_RS23345 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RGE_RS23345 PF08447 PAS fold RGE_RS23350 PF13540 Regulator of chromosome condensation (RCC1) repeat RGE_RS23355 PF00069 Protein kinase domain RGE_RS23355 PF13374 Tetratricopeptide repeat RGE_RS23355 PF13424 Tetratricopeptide repeat RGE_RS23360 PF01551 Peptidase family M23 RGE_RS23365 PF00989 PAS fold RGE_RS23370 PF01928 CYTH domain RGE_RS23370 PF05235 CHAD domain RGE_RS23375 PF00990 GGDEF domain RGE_RS23380 PF05114 Protein of unknown function (DUF692) RGE_RS23390 PF13649 Methyltransferase domain RGE_RS23395 PF00881 Nitroreductase family RGE_RS23410 PF02706 Chain length determinant protein RGE_RS23415 PF13561 Enoyl-(Acyl carrier protein) reductase RGE_RS23420 PF00535 Glycosyl transferase family 2 RGE_RS23425 PF01047 MarR family RGE_RS23430 PF00072 Response regulator receiver domain RGE_RS23430 PF00512 His Kinase A (phospho-acceptor) domain RGE_RS23430 PF00989 PAS fold RGE_RS23430 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RGE_RS23430 PF13188 PAS domain RGE_RS23430 PF13426 PAS domain RGE_RS23435 PF00076 RNA recognition motif