AD2_RS00005	SM00382	ATPases associated with a variety of cellular activities
AD2_RS00005	SM00760	Bacterial dnaA protein helix-turn-helix domain
AD2_RS00010	SM00480	DNA polymerase III beta subunit
AD2_RS00015	SM00363	S4 RNA-binding domain
AD2_RS00030	SM00387	Histidine kinase-like ATPases
AD2_RS00030	SM00433	TopoisomeraseII
AD2_RS00040	SM00470	ParB-like nuclease domain
AD2_RS00050	SM00028	Tetratricopeptide repeats
AD2_RS00090	SM01208	AD2_RS00090
AD2_RS00095	SM00257	Lysin motif
AD2_RS00095	SM00631	AD2_RS00095
AD2_RS00170	SM00257	Lysin motif
AD2_RS00180	SM00345	helix_turn_helix gluconate operon transcriptional repressor
AD2_RS00180	SM00895	AD2_RS00180
AD2_RS00195	SM00382	ATPases associated with a variety of cellular activities
AD2_RS00255	SM00382	ATPases associated with a variety of cellular activities
AD2_RS00285	SM01067	Cellulose binding domain
AD2_RS00330	SM00900	AD2_RS00330
AD2_RS00370	SM00420	helix_turn_helix, Deoxyribose operon repressor
AD2_RS00370	SM01134	AD2_RS00370
AD2_RS00385	SM00861	Transketolase, pyrimidine binding domain
AD2_RS00400	SM00382	ATPases associated with a variety of cellular activities
AD2_RS00410	SM00855	Phosphoglycerate mutase family
AD2_RS00420	SM00487	DEAD-like helicases superfamily
AD2_RS00420	SM00490	helicase superfamily c-terminal domain
AD2_RS00435	SM00060	Fibronectin type 3 domain
AD2_RS00470	SM00354	helix_turn _helix lactose operon repressor
AD2_RS00485	SM00436	Bacterial DNA topoisomeraes I ATP-binding domain
AD2_RS00485	SM00437	Bacterial DNA topoisomerase I DNA-binding domain
AD2_RS00485	SM00493	AD2_RS00485
AD2_RS00505	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
AD2_RS00535	SM00917	LeuA allosteric (dimerisation) domain
AD2_RS00585	SM01004	Delta-aminolevulinic acid dehydratase
AD2_RS00610	SM00382	ATPases associated with a variety of cellular activities
AD2_RS00640	SM00232	JAB/MPN domain
AD2_RS00655	SM00909	Sporulation and spore germination
AD2_RS00690	SM00813	Alpha-L-arabinofuranosidase C-terminus
AD2_RS00715	SM00729	Elongator protein 3, MiaB family, Radical SAM
AD2_RS00780	SM00729	Elongator protein 3, MiaB family, Radical SAM
AD2_RS00820	SM00382	ATPases associated with a variety of cellular activities
AD2_RS00840	SM01118	AD2_RS00840
AD2_RS00865	SM00905	Dihydroneopterin aldolase
AD2_RS00905	SM00633	Glycosyl hydrolase family 10
AD2_RS00920	SM00937	AD2_RS00920
AD2_RS00935	SM00226	Low molecular weight phosphatase family
AD2_RS00995	SM00382	ATPases associated with a variety of cellular activities
AD2_RS01010	SM00060	Fibronectin type 3 domain
AD2_RS01015	SM00060	Fibronectin type 3 domain
AD2_RS01105	SM01400	AD2_RS01105
AD2_RS01115	SM00487	DEAD-like helicases superfamily
AD2_RS01115	SM00490	helicase superfamily c-terminal domain
AD2_RS01115	SM00982	AD2_RS01115
AD2_RS01115	SM01058	CarD-like/TRCF domain
AD2_RS01125	SM00342	helix_turn_helix, arabinose operon control protein
AD2_RS01160	SM00858	AD2_RS01160
AD2_RS01230	SM00966	SpoVT / AbrB like domain 
AD2_RS01240	SM00411	bacterial (prokaryotic) histone like domain
AD2_RS01245	SM00363	S4 RNA-binding domain
AD2_RS01265	SM00316	Ribosomal protein S1-like RNA-binding domain
AD2_RS01280	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
AD2_RS01295	SM00831	Cation transporter/ATPase, N-terminus
AD2_RS01360	SM00388	His Kinase A (phosphoacceptor) domain
AD2_RS01375	SM00028	Tetratricopeptide repeats
AD2_RS01375	SM00245	tail specific protease
AD2_RS01395	SM00331	Sigma factor PP2C-like phosphatases
AD2_RS01425	SM00842	Cell division protein FtsA
AD2_RS01440	SM00345	helix_turn_helix gluconate operon transcriptional repressor
AD2_RS01480	SM01005	Alanine racemase, C-terminal domain
AD2_RS01520	SM00861	Transketolase, pyrimidine binding domain
AD2_RS01525	SM00382	ATPases associated with a variety of cellular activities
AD2_RS01580	SM00738	In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold.
AD2_RS01580	SM00739	KOW (Kyprides, Ouzounis, Woese) motif.
AD2_RS01585	SM00649	Ribosomal protein L11/L12
AD2_RS01610	SM00663	RNA polymerase I subunit A N-terminus
AD2_RS01630	SM00838	Elongation factor G C-terminus
AD2_RS01630	SM00889	Elongation factor G, domain IV
AD2_RS01670	SM00278	Helix-hairpin-helix DNA-binding motif class 1
AD2_RS01670	SM00465	GIY-YIG type nucleases (URI domain)
AD2_RS01690	SM00382	ATPases associated with a variety of cellular activities
AD2_RS01690	SM00994	ClpX C4-type zinc finger
AD2_RS01690	SM01086	C-terminal, D2-small domain, of ClpB protein
AD2_RS01695	SM00382	ATPases associated with a variety of cellular activities
AD2_RS01720	SM00481	DNA polymerase alpha chain like domain
AD2_RS01745	SM00849	Metallo-beta-lactamase superfamily
AD2_RS01755	SM00849	Metallo-beta-lactamase superfamily
AD2_RS01770	SM00342	helix_turn_helix, arabinose operon control protein
AD2_RS01770	SM00871	Bacterial transcription activator, effector binding domain
AD2_RS01775	SM01067	Cellulose binding domain
AD2_RS01780	SM01067	Cellulose binding domain
AD2_RS01825	SM00849	Metallo-beta-lactamase superfamily
AD2_RS01830	SM00100	Cyclic nucleotide-monophosphate binding domain
AD2_RS01830	SM00419	helix_turn_helix, cAMP Regulatory protein
AD2_RS01875	SM00644	AD2_RS01875
AD2_RS01880	SM01018	B12 binding domain
AD2_RS01905	SM00062	Bacterial periplasmic substrate-binding proteins
AD2_RS01910	SM00382	ATPases associated with a variety of cellular activities
AD2_RS01975	SM00062	Bacterial periplasmic substrate-binding proteins
AD2_RS01985	SM00382	ATPases associated with a variety of cellular activities
AD2_RS02000	SM00354	helix_turn _helix lactose operon repressor
AD2_RS02025	SM00448	cheY-homologous receiver domain
AD2_RS02025	SM00862	Transcriptional regulatory protein, C terminal
AD2_RS02030	SM00387	Histidine kinase-like ATPases
AD2_RS02030	SM00388	His Kinase A (phosphoacceptor) domain
AD2_RS02040	SM00260	Two component signalling adaptor domain
AD2_RS02045	SM00073	Histidine Phosphotransfer domain
AD2_RS02045	SM00260	Two component signalling adaptor domain
AD2_RS02045	SM00387	Histidine kinase-like ATPases
AD2_RS02045	SM01231	AD2_RS02045
AD2_RS02050	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
AD2_RS02055	SM00138	Methyltransferase, chemotaxis proteins 
AD2_RS02060	SM00448	cheY-homologous receiver domain
AD2_RS02070	SM00116	Domain in cystathionine beta-synthase and other proteins.
AD2_RS02070	SM01091	Transporter associated domain
AD2_RS02175	SM00883	Chaperonin 10 Kd subunit
AD2_RS02195	SM00636	AD2_RS02195
AD2_RS02250	SM01403	AD2_RS02250
AD2_RS02270	SM01382	AD2_RS02270
AD2_RS02270	SM01383	AD2_RS02270
AD2_RS02285	SM00322	K homology RNA-binding domain
AD2_RS02305	SM01374	AD2_RS02305
AD2_RS02375	SM00316	Ribosomal protein S1-like RNA-binding domain
AD2_RS02395	SM00363	S4 RNA-binding domain
AD2_RS02395	SM01390	AD2_RS02395
AD2_RS02400	SM00662	RNA polymerases D
AD2_RS02410	SM00382	ATPases associated with a variety of cellular activities
AD2_RS02440	SM00420	helix_turn_helix, Deoxyribose operon repressor
AD2_RS02455	SM00636	AD2_RS02455
AD2_RS02460	SM00857	Resolvase, N terminal domain
AD2_RS02465	SM00382	ATPases associated with a variety of cellular activities
AD2_RS02485	SM01058	CarD-like/TRCF domain
AD2_RS02495	SM00382	ATPases associated with a variety of cellular activities
AD2_RS02505	SM00387	Histidine kinase-like ATPases
AD2_RS02510	SM00387	Histidine kinase-like ATPases
AD2_RS02525	SM00287	Bacterial SH3 domain homologues
AD2_RS02535	SM00606	Cellulose Binding Domain Type IV
AD2_RS02535	SM00656	AD2_RS02535
AD2_RS02610	SM00382	ATPases associated with a variety of cellular activities
AD2_RS02615	SM00382	ATPases associated with a variety of cellular activities
AD2_RS02650	SM00345	helix_turn_helix gluconate operon transcriptional repressor
AD2_RS02655	SM00382	ATPases associated with a variety of cellular activities
AD2_RS02665	SM00606	Cellulose Binding Domain Type IV
AD2_RS02670	SM00606	Cellulose Binding Domain Type IV
AD2_RS02700	SM00419	helix_turn_helix, cAMP Regulatory protein
AD2_RS02720	SM00062	Bacterial periplasmic substrate-binding proteins
AD2_RS02725	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
AD2_RS02725	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
AD2_RS02815	SM00382	ATPases associated with a variety of cellular activities
AD2_RS02840	SM00902	Iron hydrogenase small subunit
AD2_RS02845	SM00257	Lysin motif
AD2_RS02850	SM00257	Lysin motif
AD2_RS02855	SM00257	Lysin motif
AD2_RS02880	SM00606	Cellulose Binding Domain Type IV
AD2_RS02955	SM00260	Two component signalling adaptor domain
AD2_RS02960	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
AD2_RS02960	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
AD2_RS02990	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
AD2_RS03005	SM00843	AD2_RS03005
AD2_RS03035	SM00240	Forkhead associated domain
AD2_RS03055	SM00028	Tetratricopeptide repeats
AD2_RS03060	SM00060	Fibronectin type 3 domain
AD2_RS03070	SM00612	AD2_RS03070
AD2_RS03160	SM00382	ATPases associated with a variety of cellular activities
AD2_RS03170	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
AD2_RS03170	SM00387	Histidine kinase-like ATPases
AD2_RS03170	SM00388	His Kinase A (phosphoacceptor) domain
AD2_RS03175	SM00448	cheY-homologous receiver domain
AD2_RS03175	SM00862	Transcriptional regulatory protein, C terminal
AD2_RS03200	SM00327	von Willebrand factor (vWF) type A domain
AD2_RS03210	SM01067	Cellulose binding domain
AD2_RS03230	SM00460	Transglutaminase/protease-like homologues
AD2_RS03245	SM00981	AD2_RS03245
AD2_RS03250	SM00448	cheY-homologous receiver domain
AD2_RS03260	SM00448	cheY-homologous receiver domain
AD2_RS03265	SM00411	bacterial (prokaryotic) histone like domain
AD2_RS03290	SM00788	Adenylosuccinate synthetase
AD2_RS03320	SM01321	AD2_RS03320
AD2_RS03395	SM00986	Uracil DNA glycosylase superfamily
AD2_RS03395	SM00987	UreE urease accessory protein, C-terminal domain 
AD2_RS03400	SM00986	Uracil DNA glycosylase superfamily
AD2_RS03400	SM00987	UreE urease accessory protein, C-terminal domain 
AD2_RS03435	SM01321	AD2_RS03435
AD2_RS03480	SM00903	Flavin reductase like domain
AD2_RS03485	SM00890	Domain of unknown function
AD2_RS03540	SM00327	von Willebrand factor (vWF) type A domain
AD2_RS03600	SM00342	helix_turn_helix, arabinose operon control protein
AD2_RS03615	SM00382	ATPases associated with a variety of cellular activities
AD2_RS03620	SM00382	ATPases associated with a variety of cellular activities
AD2_RS03645	SM00855	Phosphoglycerate mutase family
AD2_RS03655	SM00849	Metallo-beta-lactamase superfamily
AD2_RS03660	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
AD2_RS03675	SM00345	helix_turn_helix gluconate operon transcriptional repressor
AD2_RS03675	SM00895	AD2_RS03675
AD2_RS03685	SM00363	S4 RNA-binding domain
AD2_RS03695	SM01066	Carbohydrate binding domain
AD2_RS03700	SM00342	helix_turn_helix, arabinose operon control protein
AD2_RS03700	SM00448	cheY-homologous receiver domain
AD2_RS03720	SM00046	Diacylglycerol kinase catalytic domain (presumed)
AD2_RS03730	SM00382	ATPases associated with a variety of cellular activities
AD2_RS03780	SM00936	Penicillin-binding protein 5, C-terminal domain 
AD2_RS03805	SM00729	Elongator protein 3, MiaB family, Radical SAM
AD2_RS03825	SM00278	Helix-hairpin-helix DNA-binding motif class 1
AD2_RS03825	SM00382	ATPases associated with a variety of cellular activities
AD2_RS03840	SM00770	Zinc dependent phospholipase C (alpha toxin)
AD2_RS03875	SM00863	Threonyl and Alanyl tRNA synthetase second additional domain
AD2_RS04035	SM00248	ankyrin repeats
AD2_RS04080	SM00062	Bacterial periplasmic substrate-binding proteins
AD2_RS04090	SM00382	ATPases associated with a variety of cellular activities
AD2_RS04125	SM00347	helix_turn_helix multiple antibiotic resistance protein
AD2_RS04195	SM00855	Phosphoglycerate mutase family
AD2_RS04210	SM01321	AD2_RS04210
AD2_RS04260	SM01321	AD2_RS04260
AD2_RS04290	SM00382	ATPases associated with a variety of cellular activities
AD2_RS04320	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
AD2_RS04320	SM00387	Histidine kinase-like ATPases
AD2_RS04320	SM00388	His Kinase A (phosphoacceptor) domain
AD2_RS04325	SM00448	cheY-homologous receiver domain
AD2_RS04325	SM00862	Transcriptional regulatory protein, C terminal
AD2_RS04350	SM00899	AD2_RS04350
AD2_RS04355	SM00347	helix_turn_helix multiple antibiotic resistance protein
AD2_RS04355	SM00529	Helix-turn-helix diphteria tox regulatory element
AD2_RS04385	SM00155	Phospholipase D. Active site motifs.
AD2_RS04395	SM00448	cheY-homologous receiver domain
AD2_RS04395	SM00862	Transcriptional regulatory protein, C terminal
AD2_RS04400	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
AD2_RS04400	SM00387	Histidine kinase-like ATPases
AD2_RS04400	SM00388	His Kinase A (phosphoacceptor) domain
AD2_RS04405	SM00917	LeuA allosteric (dimerisation) domain
AD2_RS04440	SM00957	SecA DEAD-like domain
AD2_RS04440	SM00958	SecA preprotein cross-linking domain
AD2_RS04450	SM00028	Tetratricopeptide repeats
AD2_RS04465	SM00448	cheY-homologous receiver domain
AD2_RS04475	SM00448	cheY-homologous receiver domain
AD2_RS04475	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
AD2_RS04545	SM01321	AD2_RS04545
AD2_RS04575	SM00738	In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold.
AD2_RS04625	SM00984	UDP binding domain
AD2_RS04665	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
AD2_RS04665	SM00954	Region found in RelA / SpoT proteins
AD2_RS04675	SM00849	Metallo-beta-lactamase superfamily
AD2_RS04680	SM00729	Elongator protein 3, MiaB family, Radical SAM
AD2_RS04720	SM00240	Forkhead associated domain
AD2_RS04765	SM00838	Elongation factor G C-terminus
AD2_RS04770	SM00729	Elongator protein 3, MiaB family, Radical SAM
AD2_RS04790	SM00271	DnaJ molecular chaperone homology domain
AD2_RS04805	SM00448	cheY-homologous receiver domain
AD2_RS04825	SM00072	Guanylate kinase homologues.
AD2_RS04830	SM01409	AD2_RS04830
AD2_RS04850	SM00793	Accessory gene regulator B
AD2_RS04855	SM00729	Elongator protein 3, MiaB family, Radical SAM
AD2_RS04885	SM00670	Large family of predicted nucleotide-binding domains
AD2_RS04895	SM00849	Metallo-beta-lactamase superfamily
AD2_RS04935	SM00857	Resolvase, N terminal domain
AD2_RS04940	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
AD2_RS04965	SM00448	cheY-homologous receiver domain
AD2_RS04965	SM00862	Transcriptional regulatory protein, C terminal
AD2_RS04970	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
AD2_RS04970	SM00387	Histidine kinase-like ATPases
AD2_RS04970	SM00388	His Kinase A (phosphoacceptor) domain
AD2_RS04975	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
AD2_RS04980	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
AD2_RS04990	SM00478	endonuclease III
AD2_RS04990	SM00525	AD2_RS04990
AD2_RS04995	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
AD2_RS04995	SM00267	diguanylate cyclase
AD2_RS05015	SM00487	DEAD-like helicases superfamily
AD2_RS05015	SM00490	helicase superfamily c-terminal domain
AD2_RS05050	SM00606	Cellulose Binding Domain Type IV
AD2_RS05055	SM00093	SERine  Proteinase INhibitors
AD2_RS05065	SM00387	Histidine kinase-like ATPases
AD2_RS05070	SM00421	helix_turn_helix, Lux Regulon
AD2_RS05070	SM00448	cheY-homologous receiver domain
AD2_RS05075	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
AD2_RS05075	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
AD2_RS05085	SM00481	DNA polymerase alpha chain like domain
AD2_RS05120	SM01067	Cellulose binding domain
AD2_RS05125	SM01217	AD2_RS05125
AD2_RS05150	SM01001	AIR carboxylase
AD2_RS05170	SM00798	AICARFT/IMPCHase bienzyme
AD2_RS05170	SM00851	MGS-like domain
AD2_RS05175	SM01209	AD2_RS05175
AD2_RS05175	SM01210	AD2_RS05175
AD2_RS05180	SM00028	Tetratricopeptide repeats
AD2_RS05195	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
AD2_RS05215	SM00060	Fibronectin type 3 domain
AD2_RS05215	SM00089	Repeats in polycystic kidney disease 1 (PKD1) and other proteins
AD2_RS05220	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
AD2_RS05235	SM00936	Penicillin-binding protein 5, C-terminal domain 
AD2_RS05240	SM00278	Helix-hairpin-helix DNA-binding motif class 1
AD2_RS05245	SM00909	Sporulation and spore germination
AD2_RS05250	SM00863	Threonyl and Alanyl tRNA synthetase second additional domain
AD2_RS05285	SM00967	RNA 2'-O ribose methyltransferase substrate binding
AD2_RS05290	SM01068	Putative carbohydrate binding domain
AD2_RS05310	SM00382	ATPases associated with a variety of cellular activities
AD2_RS05310	SM01086	C-terminal, D2-small domain, of ClpB protein
AD2_RS05365	SM00763	PrkA AAA domain
AD2_RS05390	SM00996	S-adenosyl-L-homocysteine hydrolase
AD2_RS05390	SM00997	S-adenosyl-L-homocysteine hydrolase, NAD binding domain
AD2_RS05455	SM00382	ATPases associated with a variety of cellular activities
AD2_RS05495	SM00460	Transglutaminase/protease-like homologues
AD2_RS05545	SM00936	Penicillin-binding protein 5, C-terminal domain 
AD2_RS05595	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
AD2_RS05605	SM00226	Low molecular weight phosphatase family
AD2_RS05630	SM00382	ATPases associated with a variety of cellular activities
AD2_RS05635	SM00382	ATPases associated with a variety of cellular activities
AD2_RS05690	SM00382	ATPases associated with a variety of cellular activities
AD2_RS05690	SM00843	AD2_RS05690
AD2_RS05695	SM00729	Elongator protein 3, MiaB family, Radical SAM
AD2_RS05710	SM00322	K homology RNA-binding domain
AD2_RS05710	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
AD2_RS05765	SM01066	Carbohydrate binding domain
AD2_RS05815	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
AD2_RS05850	SM00981	AD2_RS05850
AD2_RS05855	SM01208	AD2_RS05855
AD2_RS05880	SM00460	Transglutaminase/protease-like homologues
AD2_RS05900	SM00852	Probable molybdopterin binding domain
AD2_RS05910	SM00382	ATPases associated with a variety of cellular activities
AD2_RS05920	SM00028	Tetratricopeptide repeats
AD2_RS06000	SM00646	AD2_RS06000
AD2_RS06010	SM00278	Helix-hairpin-helix DNA-binding motif class 1
AD2_RS06010	SM00292	breast cancer carboxy-terminal domain
AD2_RS06010	SM00532	Ligase N family
AD2_RS06030	SM00845	GatB domain
AD2_RS06035	SM00028	Tetratricopeptide repeats
AD2_RS06070	SM01207	AD2_RS06070
AD2_RS06105	SM00646	AD2_RS06105
AD2_RS06120	SM00463	Small MutS-related domain
AD2_RS06120	SM00533	DNA-binding domain of DNA mismatch repair MUTS family
AD2_RS06120	SM00534	ATPase domain of DNA mismatch repair MUTS family
AD2_RS06155	SM00838	Elongation factor G C-terminus
AD2_RS06200	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
AD2_RS06210	SM00479	AD2_RS06210
AD2_RS06210	SM00481	DNA polymerase alpha chain like domain
AD2_RS06220	SM00316	Ribosomal protein S1-like RNA-binding domain
AD2_RS06220	SM00322	K homology RNA-binding domain
AD2_RS06255	SM00904	Riboflavin kinase
AD2_RS06295	SM00740	AD2_RS06295
AD2_RS06380	SM01130	AD2_RS06380
AD2_RS06385	SM00859	Semialdehyde dehydrogenase, NAD binding domain
AD2_RS06405	SM01323	AD2_RS06405
AD2_RS06410	SM01066	Carbohydrate binding domain
AD2_RS06440	SM00934	Orotidine 5'-phosphate decarboxylase / HUMPS family
AD2_RS06445	SM01097	Carbamoyl-phosphate synthase small chain, CPSase domain
AD2_RS06450	SM00851	MGS-like domain
AD2_RS06450	SM01096	Carbamoyl-phosphate synthetase large chain, oligomerisation domain
AD2_RS06465	SM00855	Phosphoglycerate mutase family
AD2_RS06485	SM00729	Elongator protein 3, MiaB family, Radical SAM
AD2_RS06520	SM00827	Acyl transferase domain in polyketide synthase (PKS) enzymes.
AD2_RS06525	SM00822	AD2_RS06525
AD2_RS06530	SM00823	Phosphopantetheine attachment site
AD2_RS06535	SM00825	Beta-ketoacyl synthase
AD2_RS06540	SM00358	Double-stranded RNA binding motif
AD2_RS06540	SM00535	Ribonuclease III family
AD2_RS06545	SM00729	Elongator protein 3, MiaB family, Radical SAM
AD2_RS06560	SM00968	SMC proteins Flexible Hinge Domain
AD2_RS06565	SM00382	ATPases associated with a variety of cellular activities
AD2_RS06565	SM00962	SRP54-type protein, GTPase domain
AD2_RS06565	SM00963	SRP54-type protein, helical bundle domain
AD2_RS06640	SM00633	Glycosyl hydrolase family 10
AD2_RS06660	SM00363	S4 RNA-binding domain
AD2_RS06710	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
AD2_RS06715	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
AD2_RS06720	SM00400	zinc finger
AD2_RS06720	SM00493	AD2_RS06720
AD2_RS06760	SM00448	cheY-homologous receiver domain
AD2_RS06785	SM00279	Helix-hairpin-helix class 2 (Pol1 family) motifs
AD2_RS06785	SM00474	3'-5' exonuclease
AD2_RS06785	SM00475	5'-3' exonuclease
AD2_RS06785	SM00482	DNA polymerase A domain
AD2_RS06820	SM00260	Two component signalling adaptor domain
AD2_RS06895	SM01230	AD2_RS06895
AD2_RS06960	SM00518	AP endonuclease family 2
AD2_RS06975	SM00841	Elongation factor P, C-terminal
AD2_RS06975	SM01185	AD2_RS06975
AD2_RS06985	SM01321	AD2_RS06985
AD2_RS06990	SM00382	ATPases associated with a variety of cellular activities
AD2_RS07075	SM00861	Transketolase, pyrimidine binding domain
AD2_RS07080	SM00363	S4 RNA-binding domain
AD2_RS07115	SM00382	ATPases associated with a variety of cellular activities
AD2_RS07125	SM00028	Tetratricopeptide repeats
AD2_RS07125	SM00220	Serine/Threonine protein kinases, catalytic domain
AD2_RS07125	SM00267	diguanylate cyclase
AD2_RS07150	SM00448	cheY-homologous receiver domain
AD2_RS07155	SM00448	cheY-homologous receiver domain
AD2_RS07160	SM00073	Histidine Phosphotransfer domain
AD2_RS07160	SM00260	Two component signalling adaptor domain
AD2_RS07160	SM00387	Histidine kinase-like ATPases
AD2_RS07160	SM01231	AD2_RS07160
AD2_RS07165	SM00260	Two component signalling adaptor domain
AD2_RS07170	SM00138	Methyltransferase, chemotaxis proteins 
AD2_RS07175	SM00448	cheY-homologous receiver domain
AD2_RS07180	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
AD2_RS07180	SM00091	PAS domain
AD2_RS07180	SM00387	Histidine kinase-like ATPases
AD2_RS07180	SM00388	His Kinase A (phosphoacceptor) domain
AD2_RS07180	SM00448	cheY-homologous receiver domain
AD2_RS07185	SM00448	cheY-homologous receiver domain
AD2_RS07190	SM00422	helix_turn_helix, mercury resistance
AD2_RS07210	SM00387	Histidine kinase-like ATPases
AD2_RS07210	SM00388	His Kinase A (phosphoacceptor) domain
AD2_RS07215	SM00448	cheY-homologous receiver domain
AD2_RS07215	SM00862	Transcriptional regulatory protein, C terminal
AD2_RS07235	SM00642	Alpha-amylase domain
AD2_RS07265	SM00363	S4 RNA-binding domain
AD2_RS07295	SM00729	Elongator protein 3, MiaB family, Radical SAM
AD2_RS07305	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
AD2_RS07305	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
AD2_RS07320	SM00198	SCP / Tpx-1 / Ag5 / PR-1 / Sc7 family of extracellular domains.
AD2_RS07330	SM00533	DNA-binding domain of DNA mismatch repair MUTS family
AD2_RS07330	SM00534	ATPase domain of DNA mismatch repair MUTS family
AD2_RS07335	SM00853	MutL C terminal dimerisation domain
AD2_RS07335	SM01340	AD2_RS07335
AD2_RS07365	SM00382	ATPases associated with a variety of cellular activities
AD2_RS07365	SM00962	SRP54-type protein, GTPase domain
AD2_RS07365	SM00963	SRP54-type protein, helical bundle domain
AD2_RS07460	SM00530	Helix-turn-helix XRE-family like proteins 
AD2_RS07465	SM00382	ATPases associated with a variety of cellular activities
AD2_RS07490	SM01067	Cellulose binding domain
AD2_RS07495	SM00245	tail specific protease
AD2_RS07510	SM00998	Adenylosuccinate lyase C-terminus
AD2_RS07515	SM00345	helix_turn_helix gluconate operon transcriptional repressor
AD2_RS07515	SM00866	AD2_RS07515
AD2_RS07590	SM00448	cheY-homologous receiver domain
AD2_RS07590	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
AD2_RS07595	SM00481	DNA polymerase alpha chain like domain
AD2_RS07630	SM00138	Methyltransferase, chemotaxis proteins 
AD2_RS07635	SM00562	AD2_RS07635
AD2_RS07645	SM00316	Ribosomal protein S1-like RNA-binding domain
AD2_RS07650	SM00563	Phosphate acyltransferases
AD2_RS07680	SM00855	Phosphoglycerate mutase family
AD2_RS07745	SM00363	S4 RNA-binding domain
AD2_RS07785	SM00116	Domain in cystathionine beta-synthase and other proteins.
AD2_RS07800	SM01240	AD2_RS07800
AD2_RS07810	SM00936	Penicillin-binding protein 5, C-terminal domain 
AD2_RS07815	SM00941	Pyrimidine nucleoside phosphorylase C-terminal domain
AD2_RS07880	SM00244	prohibitin homologues
AD2_RS07885	SM00244	prohibitin homologues
AD2_RS07910	SM00458	Ricin-type beta-trefoil
AD2_RS07935	SM00842	Cell division protein FtsA
AD2_RS07945	SM00729	Elongator protein 3, MiaB family, Radical SAM
AD2_RS07945	SM00876	Biotin and Thiamin Synthesis associated domain
AD2_RS08000	SM01018	B12 binding domain
AD2_RS08040	SM00240	Forkhead associated domain
AD2_RS08040	SM00382	ATPases associated with a variety of cellular activities
AD2_RS08055	SM00331	Sigma factor PP2C-like phosphatases
AD2_RS08055	SM00332	Serine/threonine phosphatases, family 2C, catalytic domain
AD2_RS08060	SM00220	Serine/Threonine protein kinases, catalytic domain
AD2_RS08110	SM01067	Cellulose binding domain
AD2_RS08115	SM00089	Repeats in polycystic kidney disease 1 (PKD1) and other proteins
AD2_RS08135	SM00529	Helix-turn-helix diphteria tox regulatory element
AD2_RS08140	SM00899	AD2_RS08140
AD2_RS08150	SM00382	ATPases associated with a variety of cellular activities
AD2_RS08180	SM00849	Metallo-beta-lactamase superfamily
AD2_RS08180	SM01027	Beta-Casp domain
AD2_RS08205	SM00849	Metallo-beta-lactamase superfamily
AD2_RS08210	SM00287	Bacterial SH3 domain homologues
AD2_RS08240	SM00876	Biotin and Thiamin Synthesis associated domain
AD2_RS08310	SM00857	Resolvase, N terminal domain
AD2_RS08320	SM00487	DEAD-like helicases superfamily
AD2_RS08320	SM00490	helicase superfamily c-terminal domain
AD2_RS08340	SM00857	Resolvase, N terminal domain
AD2_RS08375	SM00331	Sigma factor PP2C-like phosphatases
AD2_RS08375	SM00448	cheY-homologous receiver domain
AD2_RS08380	SM00387	Histidine kinase-like ATPases
AD2_RS08380	SM00388	His Kinase A (phosphoacceptor) domain
AD2_RS08400	SM01067	Cellulose binding domain
AD2_RS08405	SM00983	Thiamin pyrophosphokinase, vitamin B1 binding domain
AD2_RS08420	SM00220	Serine/Threonine protein kinases, catalytic domain
AD2_RS08420	SM00740	AD2_RS08420
AD2_RS08425	SM00331	Sigma factor PP2C-like phosphatases
AD2_RS08425	SM00332	Serine/threonine phosphatases, family 2C, catalytic domain
AD2_RS08430	SM00729	Elongator protein 3, MiaB family, Radical SAM
AD2_RS08460	SM00487	DEAD-like helicases superfamily
AD2_RS08460	SM00490	helicase superfamily c-terminal domain
AD2_RS08520	SM01211	AD2_RS08520
AD2_RS08530	SM00530	Helix-turn-helix XRE-family like proteins 
AD2_RS08555	SM00382	ATPases associated with a variety of cellular activities
AD2_RS08575	SM00331	Sigma factor PP2C-like phosphatases
AD2_RS08575	SM00332	Serine/threonine phosphatases, family 2C, catalytic domain
AD2_RS08580	SM01067	Cellulose binding domain
AD2_RS08600	SM00382	ATPases associated with a variety of cellular activities
AD2_RS08605	SM00387	Histidine kinase-like ATPases
AD2_RS08605	SM00388	His Kinase A (phosphoacceptor) domain
AD2_RS08610	SM00448	cheY-homologous receiver domain
AD2_RS08610	SM00862	Transcriptional regulatory protein, C terminal
AD2_RS08625	SM00382	ATPases associated with a variety of cellular activities
AD2_RS08630	SM00028	Tetratricopeptide repeats
AD2_RS08630	SM00729	Elongator protein 3, MiaB family, Radical SAM
AD2_RS08660	SM01321	AD2_RS08660
AD2_RS08665	SM01321	AD2_RS08665
AD2_RS08680	SM00387	Histidine kinase-like ATPases
AD2_RS08680	SM00388	His Kinase A (phosphoacceptor) domain
AD2_RS08700	SM00479	AD2_RS08700
AD2_RS08705	SM00729	Elongator protein 3, MiaB family, Radical SAM
AD2_RS08715	SM00854	Bacterial capsule synthesis protein PGA_cap
AD2_RS08770	SM00260	Two component signalling adaptor domain
AD2_RS08775	SM00073	Histidine Phosphotransfer domain
AD2_RS08775	SM00260	Two component signalling adaptor domain
AD2_RS08775	SM00387	Histidine kinase-like ATPases
AD2_RS08775	SM01231	AD2_RS08775
AD2_RS08780	SM00448	cheY-homologous receiver domain
AD2_RS08795	SM00382	ATPases associated with a variety of cellular activities
AD2_RS08795	SM00962	SRP54-type protein, GTPase domain
AD2_RS08830	SM00448	cheY-homologous receiver domain
AD2_RS08885	SM00382	ATPases associated with a variety of cellular activities
AD2_RS08925	SM00436	Bacterial DNA topoisomeraes I ATP-binding domain
AD2_RS08925	SM00437	Bacterial DNA topoisomerase I DNA-binding domain
AD2_RS08925	SM00493	AD2_RS08925
AD2_RS08950	SM00382	ATPases associated with a variety of cellular activities
AD2_RS09000	SM00864	Tubulin/FtsZ family, GTPase domain
AD2_RS09000	SM00865	Tubulin/FtsZ family, C-terminal domain
AD2_RS09005	SM00842	Cell division protein FtsA
AD2_RS09055	SM00028	Tetratricopeptide repeats
AD2_RS09085	SM00902	Iron hydrogenase small subunit
AD2_RS09085	SM00929	NADH-ubiquinone oxidoreductase-G iron-sulfur binding region
AD2_RS09090	SM00928	NADH-ubiquinone oxidoreductase-F iron-sulfur binding region
AD2_RS09100	SM00331	Sigma factor PP2C-like phosphatases
AD2_RS09105	SM00091	PAS domain
AD2_RS09125	SM00881	CoA binding domain
AD2_RS09145	SM00316	Ribosomal protein S1-like RNA-binding domain
AD2_RS09145	SM00322	K homology RNA-binding domain
AD2_RS09150	SM01387	AD2_RS09150
AD2_RS09170	SM01067	Cellulose binding domain
AD2_RS09200	SM00052	Putative diguanylate phosphodiesterase
AD2_RS09200	SM00062	Bacterial periplasmic substrate-binding proteins
AD2_RS09200	SM00091	PAS domain
AD2_RS09200	SM00267	diguanylate cyclase
AD2_RS09220	SM01067	Cellulose binding domain
AD2_RS09235	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
AD2_RS09235	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
AD2_RS09255	SM00382	ATPases associated with a variety of cellular activities
AD2_RS09260	SM00382	ATPases associated with a variety of cellular activities
AD2_RS09285	SM00382	ATPases associated with a variety of cellular activities
AD2_RS09300	SM00829	Enoylreductase
AD2_RS09310	SM00382	ATPases associated with a variety of cellular activities
AD2_RS09365	SM00839	Glutamate/Leucine/Phenylalanine/Valine dehydrogenase
AD2_RS09385	SM00729	Elongator protein 3, MiaB family, Radical SAM
AD2_RS09395	SM01001	AIR carboxylase
AD2_RS09410	SM00937	AD2_RS09410
AD2_RS09415	SM00530	Helix-turn-helix XRE-family like proteins 
AD2_RS09430	SM00344	helix_turn_helix ASNC type
AD2_RS09530	SM00919	Malic enzyme, NAD binding domain
AD2_RS09530	SM01274	AD2_RS09530
AD2_RS09535	SM00903	Flavin reductase like domain
AD2_RS09540	SM00902	Iron hydrogenase small subunit
AD2_RS09540	SM00929	NADH-ubiquinone oxidoreductase-G iron-sulfur binding region
AD2_RS09545	SM00928	NADH-ubiquinone oxidoreductase-F iron-sulfur binding region
AD2_RS09555	SM00387	Histidine kinase-like ATPases
AD2_RS09565	SM00481	DNA polymerase alpha chain like domain
AD2_RS09580	SM00387	Histidine kinase-like ATPases
AD2_RS09590	SM00382	ATPases associated with a variety of cellular activities
AD2_RS09625	SM01321	AD2_RS09625
AD2_RS09670	SM00028	Tetratricopeptide repeats
AD2_RS09680	SM01007	Class II Aldolase and Adducin N-terminal domain
AD2_RS09695	SM00758	AD2_RS09695
AD2_RS09715	SM00382	ATPases associated with a variety of cellular activities
AD2_RS09715	SM01086	C-terminal, D2-small domain, of ClpB protein
AD2_RS09725	SM00382	ATPases associated with a variety of cellular activities
AD2_RS09735	SM00487	DEAD-like helicases superfamily
AD2_RS09735	SM00490	helicase superfamily c-terminal domain
AD2_RS09750	SM00434	DNA Topoisomerase IV
AD2_RS09755	SM00433	TopoisomeraseII
AD2_RS09780	SM00257	Lysin motif
AD2_RS09790	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
AD2_RS09790	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
AD2_RS09855	SM00488	AD2_RS09855
AD2_RS09855	SM00491	AD2_RS09855
AD2_RS09860	SM00138	Methyltransferase, chemotaxis proteins 
AD2_RS09865	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
AD2_RS09865	SM00387	Histidine kinase-like ATPases
AD2_RS09865	SM00388	His Kinase A (phosphoacceptor) domain
AD2_RS09865	SM00448	cheY-homologous receiver domain
AD2_RS09870	SM00387	Histidine kinase-like ATPases
AD2_RS09870	SM00388	His Kinase A (phosphoacceptor) domain
AD2_RS09870	SM00448	cheY-homologous receiver domain
AD2_RS09875	SM01329	AD2_RS09875
AD2_RS09880	SM00382	ATPases associated with a variety of cellular activities
AD2_RS09920	SM01068	Putative carbohydrate binding domain
AD2_RS09930	SM00267	diguanylate cyclase
AD2_RS09930	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
AD2_RS09935	SM00936	Penicillin-binding protein 5, C-terminal domain 
AD2_RS09940	SM01067	Cellulose binding domain
AD2_RS09945	SM00636	AD2_RS09945
AD2_RS09960	SM01067	Cellulose binding domain
AD2_RS09965	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
AD2_RS10010	SM00382	ATPases associated with a variety of cellular activities
AD2_RS10015	SM00387	Histidine kinase-like ATPases
AD2_RS10040	SM00460	Transglutaminase/protease-like homologues
AD2_RS10060	SM00534	ATPase domain of DNA mismatch repair MUTS family
AD2_RS10070	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
AD2_RS10135	SM00729	Elongator protein 3, MiaB family, Radical SAM
AD2_RS10250	SM00873	B3/4 domain
AD2_RS10250	SM00874	tRNA synthetase B5 domain
AD2_RS10250	SM00896	Ferredoxin-fold anticodon binding domain
AD2_RS10280	SM00354	helix_turn _helix lactose operon repressor
AD2_RS10320	SM01012	AD2_RS10320
AD2_RS10325	SM01230	AD2_RS10325
AD2_RS10355	SM01230	AD2_RS10355
AD2_RS10385	SM00093	SERine  Proteinase INhibitors
AD2_RS10390	SM00093	SERine  Proteinase INhibitors
AD2_RS10405	SM00909	Sporulation and spore germination
AD2_RS10415	SM00646	AD2_RS10415
AD2_RS10420	SM00842	Cell division protein FtsA
AD2_RS10430	SM00382	ATPases associated with a variety of cellular activities
AD2_RS10435	SM00278	Helix-hairpin-helix DNA-binding motif class 1
AD2_RS10505	SM00448	cheY-homologous receiver domain
AD2_RS10520	SM01103	AD2_RS10520
AD2_RS10550	SM00316	Ribosomal protein S1-like RNA-binding domain
AD2_RS10560	SM00729	Elongator protein 3, MiaB family, Radical SAM
AD2_RS10575	SM00732	Likely ribonuclease with RNase H fold.
AD2_RS10590	SM00729	Elongator protein 3, MiaB family, Radical SAM
AD2_RS10605	SM00316	Ribosomal protein S1-like RNA-binding domain
AD2_RS10605	SM00357	Cold shock protein domain
AD2_RS10605	SM00955	AD2_RS10605
AD2_RS10610	SM01321	AD2_RS10610
AD2_RS10625	SM01192	AD2_RS10625
AD2_RS10625	SM01193	AD2_RS10625
AD2_RS10630	SM00267	diguanylate cyclase
AD2_RS10630	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
AD2_RS10655	SM00846	Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain
AD2_RS10665	SM00822	AD2_RS10665
AD2_RS10665	SM00825	Beta-ketoacyl synthase
AD2_RS10665	SM00827	Acyl transferase domain in polyketide synthase (PKS) enzymes.
AD2_RS10695	SM00267	diguanylate cyclase
AD2_RS10695	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
AD2_RS10740	SM00387	Histidine kinase-like ATPases
AD2_RS10780	SM00481	DNA polymerase alpha chain like domain
AD2_RS10870	SM00851	MGS-like domain
AD2_RS10930	SM00331	Sigma factor PP2C-like phosphatases
AD2_RS10935	SM00382	ATPases associated with a variety of cellular activities
AD2_RS10935	SM00464	Found in ATP-dependent protease La (LON)
AD2_RS10945	SM00260	Two component signalling adaptor domain
AD2_RS10990	SM01067	Cellulose binding domain
AD2_RS11050	SM01067	Cellulose binding domain
AD2_RS11065	SM00635	Bacterial Ig-like domain 2
AD2_RS11100	SM00530	Helix-turn-helix XRE-family like proteins 
AD2_RS11130	SM01067	Cellulose binding domain
AD2_RS11145	SM01067	Cellulose binding domain
AD2_RS11150	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
AD2_RS11150	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
AD2_RS11155	SM00260	Two component signalling adaptor domain
AD2_RS11160	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
AD2_RS11160	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
AD2_RS11165	SM00260	Two component signalling adaptor domain
AD2_RS11185	SM00100	Cyclic nucleotide-monophosphate binding domain
AD2_RS11190	SM00838	Elongation factor G C-terminus
AD2_RS11190	SM00889	Elongation factor G, domain IV
AD2_RS11260	SM00729	Elongator protein 3, MiaB family, Radical SAM
AD2_RS11260	SM00876	Biotin and Thiamin Synthesis associated domain
AD2_RS11265	SM00938	Nitrogen regulatory protein P-II
AD2_RS11345	SM00530	Helix-turn-helix XRE-family like proteins 
AD2_RS11460	SM00849	Metallo-beta-lactamase superfamily
AD2_RS11475	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
AD2_RS11475	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
AD2_RS11520	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
AD2_RS11520	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
AD2_RS11525	SM00938	Nitrogen regulatory protein P-II
AD2_RS11530	SM00382	ATPases associated with a variety of cellular activities
AD2_RS11535	SM00382	ATPases associated with a variety of cellular activities
AD2_RS11540	SM00347	helix_turn_helix multiple antibiotic resistance protein
AD2_RS11625	SM00365	Leucine-rich repeat, SDS22-like subfamily
AD2_RS11625	SM00369	Leucine-rich repeats, typical (most populated) subfamily
AD2_RS11665	SM00563	Phosphate acyltransferases
AD2_RS11680	SM00382	ATPases associated with a variety of cellular activities
AD2_RS11685	SM00387	Histidine kinase-like ATPases
AD2_RS11685	SM00388	His Kinase A (phosphoacceptor) domain
AD2_RS11690	SM00448	cheY-homologous receiver domain
AD2_RS11690	SM00862	Transcriptional regulatory protein, C terminal
AD2_RS11725	SM00382	ATPases associated with a variety of cellular activities
AD2_RS11735	SM00530	Helix-turn-helix XRE-family like proteins 
AD2_RS11740	SM01230	AD2_RS11740
AD2_RS11745	SM00845	GatB domain
AD2_RS11825	SM00382	ATPases associated with a variety of cellular activities
AD2_RS11855	SM00382	ATPases associated with a variety of cellular activities
AD2_RS11880	SM00729	Elongator protein 3, MiaB family, Radical SAM
AD2_RS11890	SM00062	Bacterial periplasmic substrate-binding proteins
AD2_RS11900	SM00382	ATPases associated with a variety of cellular activities
AD2_RS11935	SM00382	ATPases associated with a variety of cellular activities
AD2_RS11955	SM01133	AD2_RS11955
AD2_RS11960	SM00342	helix_turn_helix, arabinose operon control protein
AD2_RS11960	SM00448	cheY-homologous receiver domain
AD2_RS11965	SM00387	Histidine kinase-like ATPases
AD2_RS11975	SM00382	ATPases associated with a variety of cellular activities
AD2_RS12025	SM00487	DEAD-like helicases superfamily
AD2_RS12025	SM00490	helicase superfamily c-terminal domain
AD2_RS12065	SM00507	HNH nucleases
AD2_RS12080	SM00857	Resolvase, N terminal domain
AD2_RS12090	SM00857	Resolvase, N terminal domain
AD2_RS12100	SM00257	Lysin motif
AD2_RS12100	SM00644	AD2_RS12100
AD2_RS12225	SM00470	ParB-like nuclease domain
AD2_RS12230	SM00470	ParB-like nuclease domain
AD2_RS12240	SM00507	HNH nucleases
AD2_RS12255	SM00990	AD2_RS12255
AD2_RS12265	SM00382	ATPases associated with a variety of cellular activities
AD2_RS12275	SM00387	Histidine kinase-like ATPases
AD2_RS12275	SM00388	His Kinase A (phosphoacceptor) domain
AD2_RS12280	SM00448	cheY-homologous receiver domain
AD2_RS12280	SM00862	Transcriptional regulatory protein, C terminal
AD2_RS12285	SM00849	Metallo-beta-lactamase superfamily
AD2_RS12325	SM00382	ATPases associated with a variety of cellular activities
AD2_RS12375	SM00382	ATPases associated with a variety of cellular activities
AD2_RS12495	SM00382	ATPases associated with a variety of cellular activities
AD2_RS12510	SM00382	ATPases associated with a variety of cellular activities
AD2_RS12510	SM01086	C-terminal, D2-small domain, of ClpB protein
AD2_RS12540	SM00838	Elongation factor G C-terminus
AD2_RS12540	SM00889	Elongation factor G, domain IV
AD2_RS12560	SM00881	CoA binding domain
AD2_RS12565	SM00382	ATPases associated with a variety of cellular activities
AD2_RS12570	SM00257	Lysin motif
AD2_RS12570	SM00287	Bacterial SH3 domain homologues
AD2_RS12570	SM00636	AD2_RS12570
AD2_RS12575	SM00382	ATPases associated with a variety of cellular activities
AD2_RS12590	SM00646	AD2_RS12590
AD2_RS12595	SM00267	diguanylate cyclase
AD2_RS12595	SM00448	cheY-homologous receiver domain
AD2_RS12600	SM00635	Bacterial Ig-like domain 2
AD2_RS12670	SM00382	ATPases associated with a variety of cellular activities
AD2_RS12675	SM00382	ATPases associated with a variety of cellular activities
AD2_RS12695	SM00342	helix_turn_helix, arabinose operon control protein
AD2_RS12695	SM00448	cheY-homologous receiver domain
AD2_RS12700	SM00387	Histidine kinase-like ATPases
AD2_RS12700	SM00388	His Kinase A (phosphoacceptor) domain
AD2_RS12700	SM00448	cheY-homologous receiver domain
AD2_RS12705	SM00387	Histidine kinase-like ATPases
AD2_RS12705	SM00448	cheY-homologous receiver domain
AD2_RS12775	SM00633	Glycosyl hydrolase family 10
AD2_RS12780	SM00729	Elongator protein 3, MiaB family, Radical SAM
AD2_RS12780	SM00876	Biotin and Thiamin Synthesis associated domain
AD2_RS12815	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
AD2_RS12815	SM00387	Histidine kinase-like ATPases
AD2_RS12815	SM00388	His Kinase A (phosphoacceptor) domain
AD2_RS12820	SM00448	cheY-homologous receiver domain
AD2_RS12820	SM00862	Transcriptional regulatory protein, C terminal
AD2_RS12875	SM00357	Cold shock protein domain
AD2_RS12895	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
AD2_RS12895	SM00245	tail specific protease
AD2_RS12910	SM00382	ATPases associated with a variety of cellular activities
AD2_RS12920	SM00382	ATPases associated with a variety of cellular activities
AD2_RS12925	SM00859	Semialdehyde dehydrogenase, NAD binding domain
AD2_RS12945	SM01097	Carbamoyl-phosphate synthase small chain, CPSase domain
AD2_RS12950	SM00851	MGS-like domain
AD2_RS12950	SM01096	Carbamoyl-phosphate synthetase large chain, oligomerisation domain
AD2_RS12950	SM01209	AD2_RS12950
AD2_RS13055	SM00028	Tetratricopeptide repeats
AD2_RS13070	SM00606	Cellulose Binding Domain Type IV
AD2_RS13075	SM01321	AD2_RS13075
AD2_RS13090	SM00028	Tetratricopeptide repeats
AD2_RS13095	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
AD2_RS13095	SM00387	Histidine kinase-like ATPases
AD2_RS13095	SM00388	His Kinase A (phosphoacceptor) domain
AD2_RS13100	SM00448	cheY-homologous receiver domain
AD2_RS13100	SM00862	Transcriptional regulatory protein, C terminal
AD2_RS13105	SM00831	Cation transporter/ATPase, N-terminus
AD2_RS13155	SM00306	Hint (Hedgehog/Intein) domain N-terminal region
AD2_RS13160	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
AD2_RS13160	SM00245	tail specific protease
AD2_RS13185	SM00836	DALR anticodon binding domain
AD2_RS13185	SM01016	Arginyl tRNA synthetase N terminal dom
AD2_RS13205	SM00116	Domain in cystathionine beta-synthase and other proteins.
AD2_RS13205	SM00924	MgtE intracellular N domain
AD2_RS13215	SM00834	Putative regulatory protein
AD2_RS13220	SM00909	Sporulation and spore germination
AD2_RS13225	SM01133	AD2_RS13225
AD2_RS13280	SM00316	Ribosomal protein S1-like RNA-binding domain
AD2_RS13280	SM00732	Likely ribonuclease with RNase H fold.
AD2_RS13320	SM00363	S4 RNA-binding domain
AD2_RS13325	SM00606	Cellulose Binding Domain Type IV
AD2_RS13325	SM00633	Glycosyl hydrolase family 10
AD2_RS13375	SM00028	Tetratricopeptide repeats
AD2_RS13395	SM00306	Hint (Hedgehog/Intein) domain N-terminal region
AD2_RS13440	SM00857	Resolvase, N terminal domain
AD2_RS13475	SM00306	Hint (Hedgehog/Intein) domain N-terminal region
AD2_RS13480	SM00942	Primase C terminal 1 (PriCT-1)
AD2_RS13480	SM00943	Bifunctional DNA primase/polymerase, N-terminal
AD2_RS13495	SM00306	Hint (Hedgehog/Intein) domain N-terminal region
AD2_RS13565	SM00943	Bifunctional DNA primase/polymerase, N-terminal
AD2_RS13580	SM00306	Hint (Hedgehog/Intein) domain N-terminal region
AD2_RS13610	SM00306	Hint (Hedgehog/Intein) domain N-terminal region
AD2_RS13615	SM00942	Primase C terminal 1 (PriCT-1)
AD2_RS13620	SM00943	Bifunctional DNA primase/polymerase, N-terminal
AD2_RS13635	SM00306	Hint (Hedgehog/Intein) domain N-terminal region
AD2_RS13650	SM01321	AD2_RS13650
AD2_RS13665	SM00220	Serine/Threonine protein kinases, catalytic domain
AD2_RS13750	SM00306	Hint (Hedgehog/Intein) domain N-terminal region
AD2_RS13765	SM00306	Hint (Hedgehog/Intein) domain N-terminal region
AD2_RS13820	SM00506	Appr-1"-p processing enzyme
AD2_RS13840	SM00967	RNA 2'-O ribose methyltransferase substrate binding
AD2_RS13865	SM00840	AD2_RS13865
AD2_RS13885	SM00478	endonuclease III
AD2_RS13930	SM00881	CoA binding domain
AD2_RS14010	SM00650	Ribosomal RNA adenine dimethylases
AD2_RS14015	SM01208	AD2_RS14015
AD2_RS14050	SM00966	SpoVT / AbrB like domain 
AD2_RS14075	SM00382	ATPases associated with a variety of cellular activities
AD2_RS14105	SM00382	ATPases associated with a variety of cellular activities
AD2_RS14115	SM00448	cheY-homologous receiver domain
AD2_RS14115	SM00862	Transcriptional regulatory protein, C terminal
AD2_RS14120	SM00387	Histidine kinase-like ATPases
AD2_RS14140	SM00382	ATPases associated with a variety of cellular activities
AD2_RS14145	SM00633	Glycosyl hydrolase family 10
AD2_RS14250	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
AD2_RS14255	SM00493	AD2_RS14255
AD2_RS14265	SM00382	ATPases associated with a variety of cellular activities
AD2_RS14295	SM01067	Cellulose binding domain
AD2_RS14385	SM00331	Sigma factor PP2C-like phosphatases
AD2_RS14410	SM00487	DEAD-like helicases superfamily
AD2_RS14420	SM00357	Cold shock protein domain
AD2_RS14420	SM00382	ATPases associated with a variety of cellular activities
AD2_RS14420	SM00959	Rho termination factor, N-terminal domain
AD2_RS14470	SM00710	Parallel beta-helix repeats
AD2_RS14475	SM00656	AD2_RS14475
AD2_RS14530	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
AD2_RS14530	SM00267	diguanylate cyclase
AD2_RS14540	SM00642	Alpha-amylase domain
AD2_RS14555	SM00606	Cellulose Binding Domain Type IV
AD2_RS14560	SM00606	Cellulose Binding Domain Type IV
AD2_RS14565	SM00606	Cellulose Binding Domain Type IV
AD2_RS14570	SM00606	Cellulose Binding Domain Type IV
AD2_RS14570	SM00710	Parallel beta-helix repeats
AD2_RS14575	SM00606	Cellulose Binding Domain Type IV
AD2_RS14580	SM00606	Cellulose Binding Domain Type IV
AD2_RS14595	SM00422	helix_turn_helix, mercury resistance
AD2_RS14595	SM00871	Bacterial transcription activator, effector binding domain
AD2_RS14605	SM00382	ATPases associated with a variety of cellular activities
AD2_RS14610	SM00387	Histidine kinase-like ATPases
AD2_RS14615	SM00448	cheY-homologous receiver domain
AD2_RS14615	SM00862	Transcriptional regulatory protein, C terminal
AD2_RS14695	SM01329	AD2_RS14695
AD2_RS14710	SM00342	helix_turn_helix, arabinose operon control protein
AD2_RS14800	SM00858	AD2_RS14800
AD2_RS14900	SM00382	ATPases associated with a variety of cellular activities
AD2_RS14920	SM00382	ATPases associated with a variety of cellular activities
AD2_RS14930	SM00977	TilS substrate C-terminal domain
AD2_RS15005	SM00382	ATPases associated with a variety of cellular activities
AD2_RS15040	SM00382	ATPases associated with a variety of cellular activities
AD2_RS15050	SM00062	Bacterial periplasmic substrate-binding proteins
AD2_RS15060	SM00382	ATPases associated with a variety of cellular activities
AD2_RS15065	SM00448	cheY-homologous receiver domain
AD2_RS15070	SM00138	Methyltransferase, chemotaxis proteins 
AD2_RS15075	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
AD2_RS15080	SM00073	Histidine Phosphotransfer domain
AD2_RS15080	SM00260	Two component signalling adaptor domain
AD2_RS15080	SM00387	Histidine kinase-like ATPases
AD2_RS15080	SM01231	AD2_RS15080
AD2_RS15085	SM00260	Two component signalling adaptor domain
AD2_RS15095	SM00342	helix_turn_helix, arabinose operon control protein
AD2_RS15110	SM00382	ATPases associated with a variety of cellular activities
AD2_RS15145	SM00487	DEAD-like helicases superfamily
AD2_RS15145	SM00490	helicase superfamily c-terminal domain
AD2_RS15220	SM00900	AD2_RS15220
AD2_RS15235	SM00849	Metallo-beta-lactamase superfamily
AD2_RS15260	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
AD2_RS15260	SM00387	Histidine kinase-like ATPases
AD2_RS15260	SM00388	His Kinase A (phosphoacceptor) domain
AD2_RS15265	SM00448	cheY-homologous receiver domain
AD2_RS15265	SM00862	Transcriptional regulatory protein, C terminal
AD2_RS15310	SM00984	UDP binding domain
AD2_RS15340	SM00028	Tetratricopeptide repeats
AD2_RS15370	SM00116	Domain in cystathionine beta-synthase and other proteins.
AD2_RS15400	SM00793	Accessory gene regulator B
AD2_RS15425	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
AD2_RS15430	SM01067	Cellulose binding domain
AD2_RS15435	SM00434	DNA Topoisomerase IV
AD2_RS15440	SM00470	ParB-like nuclease domain
AD2_RS15450	SM01228	AD2_RS15450
AD2_RS15460	SM00322	K homology RNA-binding domain
AD2_RS15460	SM00393	Putative single-stranded nucleic acids-binding domain
AD2_RS15460	SM01245	AD2_RS15460
AD2_RS15470	SM01234	AD2_RS15470
