locus-tag class description CLO1313_RS00010 PF08299 Bacterial dnaA protein helix-turn-helix CLO1313_RS00010 PF00308 Bacterial dnaA protein CLO1313_RS00010 PF11638 DnaA N-terminal domain CLO1313_RS00015 PF00712 DNA polymerase III beta subunit, N-terminal domain CLO1313_RS00015 PF02767 DNA polymerase III beta subunit, central domain CLO1313_RS00015 PF02768 DNA polymerase III beta subunit, C-terminal domain CLO1313_RS00025 PF02463 RecF/RecN/SMC N terminal domain CLO1313_RS00035 PF00986 DNA gyrase B subunit, carboxyl terminus CLO1313_RS00035 PF00204 DNA gyrase B CLO1313_RS00035 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CLO1313_RS00035 PF01751 Toprim domain CLO1313_RS00040 PF13614 AAA domain CLO1313_RS00045 PF17762 HTH domain found in ParB protein CLO1313_RS00045 PF02195 ParB-like nuclease domain CLO1313_RS00060 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) CLO1313_RS00060 PF02403 Seryl-tRNA synthetase N-terminal domain CLO1313_RS00075 PF07690 Major Facilitator Superfamily CLO1313_RS00085 PF00395 S-layer homology domain CLO1313_RS00095 PF04294 VanW like protein CLO1313_RS00100 PF01476 LysM domain CLO1313_RS00100 PF00246 Zinc carboxypeptidase CLO1313_RS00115 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase CLO1313_RS00120 PF00037 4Fe-4S binding domain CLO1313_RS00125 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II CLO1313_RS00125 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg CLO1313_RS00130 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain CLO1313_RS00160 PF01268 Formate--tetrahydrofolate ligase CLO1313_RS00165 PF05582 YabG peptidase U57 CLO1313_RS00180 PF00288 GHMP kinases N terminal domain CLO1313_RS00180 PF08544 GHMP kinases C terminal CLO1313_RS00185 PF00392 Bacterial regulatory proteins, gntR family CLO1313_RS00185 PF07729 FCD domain CLO1313_RS00190 PF00403 Heavy-metal-associated domain CLO1313_RS00200 PF01434 Peptidase family M41 CLO1313_RS00200 PF00004 ATPase family associated with various cellular activities (AAA) CLO1313_RS00200 PF17862 AAA+ lid domain CLO1313_RS00225 PF13514 AAA domain CLO1313_RS00230 PF00877 NlpC/P60 family CLO1313_RS00235 PF06925 Monogalactosyldiacylglycerol (MGDG) synthase CLO1313_RS00235 PF04101 Glycosyltransferase family 28 C-terminal domain CLO1313_RS00245 PF01471 Putative peptidoglycan binding domain CLO1313_RS00245 PF07486 Cell Wall Hydrolase CLO1313_RS00250 PF14620 YpeB sporulation CLO1313_RS00260 PF11638 DnaA N-terminal domain CLO1313_RS00260 PF08299 Bacterial dnaA protein helix-turn-helix CLO1313_RS00260 PF00308 Bacterial dnaA protein CLO1313_RS00275 PF01966 HD domain CLO1313_RS00290 PF00963 Cohesin domain CLO1313_RS00290 PF00942 Cellulose binding domain CLO1313_RS00290 PF03442 Carbohydrate binding domain X2 CLO1313_RS00300 PF01618 MotA/TolQ/ExbB proton channel family CLO1313_RS00305 PF00691 OmpA family CLO1313_RS00305 PF13677 Membrane MotB of proton-channel complex MotA/MotB CLO1313_RS00310 PF07136 Protein of unknown function (DUF1385) CLO1313_RS00315 PF05175 Methyltransferase small domain CLO1313_RS00315 PF17827 PrmC N-terminal domain CLO1313_RS00325 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit CLO1313_RS00325 PF13237 4Fe-4S dicluster domain CLO1313_RS00325 PF13375 RnfC Barrel sandwich hybrid domain CLO1313_RS00325 PF10531 SLBB domain CLO1313_RS00330 PF03116 NQR2, RnfD, RnfE family CLO1313_RS00335 PF04205 FMN-binding domain CLO1313_RS00340 PF02508 Rnf-Nqr subunit, membrane protein CLO1313_RS00345 PF02508 Rnf-Nqr subunit, membrane protein CLO1313_RS00350 PF04060 Putative Fe-S cluster CLO1313_RS00360 PF01202 Shikimate kinase CLO1313_RS00375 PF00455 DeoR C terminal sensor domain CLO1313_RS00375 PF08220 DeoR-like helix-turn-helix domain CLO1313_RS00380 PF00370 FGGY family of carbohydrate kinases, N-terminal domain CLO1313_RS00380 PF02782 FGGY family of carbohydrate kinases, C-terminal domain CLO1313_RS00385 PF00456 Transketolase, thiamine diphosphate binding domain CLO1313_RS00390 PF02780 Transketolase, C-terminal domain CLO1313_RS00390 PF02779 Transketolase, pyrimidine binding domain CLO1313_RS00395 PF00107 Zinc-binding dehydrogenase CLO1313_RS00395 PF08240 Alcohol dehydrogenase GroES-like domain CLO1313_RS00400 PF13407 Periplasmic binding protein domain CLO1313_RS00405 PF00005 ABC transporter CLO1313_RS00410 PF02653 Branched-chain amino acid transport system / permease component CLO1313_RS00415 PF00300 Histidine phosphatase superfamily (branch 1) CLO1313_RS00425 PF04434 SWIM zinc finger CLO1313_RS00425 PF00271 Helicase conserved C-terminal domain CLO1313_RS00425 PF00176 SNF2 family N-terminal domain CLO1313_RS00430 PF08439 Oligopeptidase F CLO1313_RS00430 PF01432 Peptidase family M3 CLO1313_RS00440 PF00331 Glycosyl hydrolase family 10 CLO1313_RS00440 PF00395 S-layer homology domain CLO1313_RS00440 PF02018 Carbohydrate binding domain CLO1313_RS00440 PF06452 Carbohydrate family 9 binding domain-like CLO1313_RS00450 PF14437 MafB19-like deaminase CLO1313_RS00465 PF07883 Cupin domain CLO1313_RS00470 PF06725 3D domain CLO1313_RS00475 PF00356 Bacterial regulatory proteins, lacI family CLO1313_RS00480 PF00942 Cellulose binding domain CLO1313_RS00480 PF12791 Anti-sigma factor N-terminus CLO1313_RS00485 PF00395 S-layer homology domain CLO1313_RS00485 PF00150 Cellulase (glycosyl hydrolase family 5) CLO1313_RS00485 PF03424 Carbohydrate binding domain (family 17/28) CLO1313_RS00490 PF05582 YabG peptidase U57 CLO1313_RS00495 PF01751 Toprim domain CLO1313_RS00495 PF01131 DNA topoisomerase CLO1313_RS00505 PF00924 Mechanosensitive ion channel CLO1313_RS00515 PF13180 PDZ domain CLO1313_RS00525 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region CLO1313_RS00530 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain CLO1313_RS00530 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain CLO1313_RS00530 PF00205 Thiamine pyrophosphate enzyme, central domain CLO1313_RS00535 PF10369 Small subunit of acetolactate synthase CLO1313_RS00540 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain CLO1313_RS00540 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain CLO1313_RS00545 PF00682 HMGL-like CLO1313_RS00545 PF08502 LeuA allosteric (dimerisation) domain CLO1313_RS00555 PF04542 Sigma-70 region 2 CLO1313_RS00560 PF12791 Anti-sigma factor N-terminus CLO1313_RS00570 PF02082 Transcriptional regulator CLO1313_RS00575 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain CLO1313_RS00575 PF01488 Shikimate / quinate 5-dehydrogenase CLO1313_RS00580 PF01488 Shikimate / quinate 5-dehydrogenase CLO1313_RS00580 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain CLO1313_RS00585 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain CLO1313_RS00585 PF03900 Porphobilinogen deaminase, C-terminal domain CLO1313_RS00590 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases CLO1313_RS00590 PF02602 Uroporphyrinogen-III synthase HemD CLO1313_RS00595 PF00490 Delta-aminolevulinic acid dehydratase CLO1313_RS00600 PF00202 Aminotransferase class-III CLO1313_RS00610 PF00528 Binding-protein-dependent transport system inner membrane component CLO1313_RS00615 PF00528 Binding-protein-dependent transport system inner membrane component CLO1313_RS00620 PF00005 ABC transporter CLO1313_RS00620 PF17850 CysA C-terminal regulatory domain CLO1313_RS00620 PF12857 TOBE-like domain CLO1313_RS00625 PF01507 Phosphoadenosine phosphosulfate reductase family CLO1313_RS00630 PF01507 Phosphoadenosine phosphosulfate reductase family CLO1313_RS00635 PF00009 Elongation factor Tu GTP binding domain CLO1313_RS00645 PF00899 ThiF family CLO1313_RS00655 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain CLO1313_RS00655 PF01077 Nitrite and sulphite reductase 4Fe-4S domain CLO1313_RS00655 PF13187 4Fe-4S dicluster domain CLO1313_RS00670 PF08281 Sigma-70, region 4 CLO1313_RS00670 PF04542 Sigma-70 region 2 CLO1313_RS00700 PF06964 Alpha-L-arabinofuranosidase C-terminal domain CLO1313_RS00705 PF00404 Dockerin type I domain CLO1313_RS00705 PF02011 Glycosyl hydrolase family 48 CLO1313_RS00715 PF04055 Radical SAM superfamily CLO1313_RS00715 PF06463 Molybdenum Cofactor Synthesis C CLO1313_RS00720 PF04055 Radical SAM superfamily CLO1313_RS00720 PF06463 Molybdenum Cofactor Synthesis C CLO1313_RS00725 PF06463 Molybdenum Cofactor Synthesis C CLO1313_RS00725 PF04055 Radical SAM superfamily CLO1313_RS00740 PF06463 Molybdenum Cofactor Synthesis C CLO1313_RS00740 PF04055 Radical SAM superfamily CLO1313_RS00745 PF00535 Glycosyl transferase family 2 CLO1313_RS00750 PF16363 GDP-mannose 4,6 dehydratase CLO1313_RS00755 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family CLO1313_RS00760 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase CLO1313_RS00765 PF16363 GDP-mannose 4,6 dehydratase CLO1313_RS00770 PF00483 Nucleotidyl transferase CLO1313_RS00780 PF00872 Transposase, Mutator family CLO1313_RS00790 PF04055 Radical SAM superfamily CLO1313_RS00790 PF02310 B12 binding domain CLO1313_RS00830 PF00005 ABC transporter CLO1313_RS00835 PF00528 Binding-protein-dependent transport system inner membrane component CLO1313_RS00850 PF01928 CYTH domain CLO1313_RS00855 PF02541 Ppx/GppA phosphatase family CLO1313_RS00860 PF00465 Iron-containing alcohol dehydrogenase CLO1313_RS00870 PF00809 Pterin binding enzyme CLO1313_RS00875 PF02152 Dihydroneopterin aldolase CLO1313_RS00880 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) CLO1313_RS00890 PF08279 HTH domain CLO1313_RS00890 PF02237 Biotin protein ligase C terminal domain CLO1313_RS00890 PF03099 Biotin/lipoate A/B protein ligase family CLO1313_RS00905 PF03309 Type III pantothenate kinase CLO1313_RS00915 PF00331 Glycosyl hydrolase family 10 CLO1313_RS00915 PF12791 Anti-sigma factor N-terminus CLO1313_RS00930 PF00472 RF-1 domain CLO1313_RS00930 PF03462 PCRF domain CLO1313_RS00935 PF02535 ZIP Zinc transporter CLO1313_RS00940 PF01300 Telomere recombination CLO1313_RS00940 PF03481 Putative GTP-binding controlling metal-binding CLO1313_RS00945 PF01451 Low molecular weight phosphotyrosine protein phosphatase CLO1313_RS00950 PF02502 Ribose/Galactose Isomerase CLO1313_RS00960 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region CLO1313_RS00965 PF00953 Glycosyl transferase family 4 CLO1313_RS00970 PF02350 UDP-N-acetylglucosamine 2-epimerase CLO1313_RS00975 PF00119 ATP synthase A chain CLO1313_RS00980 PF00137 ATP synthase subunit C CLO1313_RS00985 PF00430 ATP synthase B/B' CF(0) CLO1313_RS00990 PF00213 ATP synthase delta (OSCP) subunit CLO1313_RS00995 PF02874 ATP synthase alpha/beta family, beta-barrel domain CLO1313_RS00995 PF00306 ATP synthase alpha/beta chain, C terminal domain CLO1313_RS00995 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain CLO1313_RS01000 PF00231 ATP synthase CLO1313_RS01005 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain CLO1313_RS01005 PF02874 ATP synthase alpha/beta family, beta-barrel domain CLO1313_RS01010 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain CLO1313_RS01010 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain CLO1313_RS01030 PF00963 Cohesin domain CLO1313_RS01030 PF00395 S-layer homology domain CLO1313_RS01040 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) CLO1313_RS01045 PF08486 Stage II sporulation protein CLO1313_RS01055 PF12116 Stage III sporulation protein D CLO1313_RS01065 PF06429 Flagellar basal body rod FlgEFG protein C-terminal CLO1313_RS01065 PF00460 Flagella basal body rod protein CLO1313_RS01070 PF06429 Flagellar basal body rod FlgEFG protein C-terminal CLO1313_RS01070 PF00460 Flagella basal body rod protein CLO1313_RS01085 PF00005 ABC transporter CLO1313_RS01085 PF02687 FtsX-like permease family CLO1313_RS01085 PF12704 MacB-like periplasmic core domain CLO1313_RS01090 PF07977 FabA-like domain CLO1313_RS01095 PF02875 Mur ligase family, glutamate ligase domain CLO1313_RS01095 PF08245 Mur ligase middle domain CLO1313_RS01095 PF01225 Mur ligase family, catalytic domain CLO1313_RS01100 PF09182 Bacterial purine repressor, N-terminal CLO1313_RS01100 PF00156 Phosphoribosyl transferase domain CLO1313_RS01105 PF04026 SpoVG CLO1313_RS01110 PF00132 Bacterial transferase hexapeptide (six repeats) CLO1313_RS01110 PF14602 Hexapeptide repeat of succinyl-transferase CLO1313_RS01110 PF00483 Nucleotidyl transferase CLO1313_RS01115 PF14572 Phosphoribosyl synthetase-associated domain CLO1313_RS01115 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase CLO1313_RS01120 PF01195 Peptidyl-tRNA hydrolase CLO1313_RS01125 PF02559 CarD-like/TRCF domain CLO1313_RS01125 PF17757 UvrB interaction domain CLO1313_RS01125 PF03461 TRCF domain CLO1313_RS01125 PF00270 DEAD/DEAH box helicase CLO1313_RS01125 PF00271 Helicase conserved C-terminal domain CLO1313_RS01135 PF12833 Helix-turn-helix domain CLO1313_RS01135 PF02311 AraC-like ligand binding domain CLO1313_RS01140 PF01243 Pyridoxamine 5'-phosphate oxidase CLO1313_RS01140 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region CLO1313_RS01145 PF03023 Lipid II flippase MurJ CLO1313_RS01150 PF13477 Glycosyl transferase 4-like CLO1313_RS01150 PF00534 Glycosyl transferases group 1 CLO1313_RS01160 PF02348 Cytidylyltransferase CLO1313_RS01160 PF13472 GDSL-like Lipase/Acylhydrolase family CLO1313_RS01165 PF02350 UDP-N-acetylglucosamine 2-epimerase CLO1313_RS01170 PF03102 NeuB family CLO1313_RS01170 PF08666 SAF domain CLO1313_RS01180 PF00483 Nucleotidyl transferase CLO1313_RS01185 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family CLO1313_RS01190 PF01370 NAD dependent epimerase/dehydratase family CLO1313_RS01200 PF01820 D-ala D-ala ligase N-terminus CLO1313_RS01200 PF07478 D-ala D-ala ligase C-terminus CLO1313_RS01205 PF02397 Bacterial sugar transferase CLO1313_RS01215 PF02719 Polysaccharide biosynthesis protein CLO1313_RS01230 PF13614 AAA domain CLO1313_RS01240 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin CLO1313_RS01240 PF15714 Stage V sporulation protein T C-terminal, transcription factor CLO1313_RS01245 PF03819 MazG nucleotide pyrophosphohydrolase domain CLO1313_RS01250 PF00216 Bacterial DNA-binding protein CLO1313_RS01255 PF01479 S4 domain CLO1313_RS01275 PF00575 S1 RNA binding domain CLO1313_RS01290 PF00672 HAMP domain CLO1313_RS01290 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CLO1313_RS01295 PF03109 ABC1 family CLO1313_RS01305 PF00690 Cation transporter/ATPase, N-terminus CLO1313_RS01305 PF00689 Cation transporting ATPase, C-terminus CLO1313_RS01370 PF00989 PAS fold CLO1313_RS01370 PF00512 His Kinase A (phospho-acceptor) domain CLO1313_RS01370 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CLO1313_RS01385 PF03572 Peptidase family S41 CLO1313_RS01385 PF00595 PDZ domain CLO1313_RS01405 PF07228 Stage II sporulation protein E (SpoIIE) CLO1313_RS01430 PF01207 Dihydrouridine synthase (Dus) CLO1313_RS01435 PF02491 SHS2 domain inserted in FTSA CLO1313_RS01440 PF03061 Thioesterase superfamily CLO1313_RS01445 PF01943 Polysaccharide biosynthesis protein CLO1313_RS01445 PF14667 Polysaccharide biosynthesis C-terminal domain CLO1313_RS01450 PF00392 Bacterial regulatory proteins, gntR family CLO1313_RS01450 PF00155 Aminotransferase class I and II CLO1313_RS01460 PF00132 Bacterial transferase hexapeptide (six repeats) CLO1313_RS01485 PF03853 YjeF-related protein N-terminus CLO1313_RS01485 PF01256 Carbohydrate kinase CLO1313_RS01490 PF01168 Alanine racemase, N-terminal domain CLO1313_RS01490 PF00842 Alanine racemase, C-terminal domain CLO1313_RS01495 PF01402 Ribbon-helix-helix protein, copG family CLO1313_RS01500 PF02452 PemK-like, MazF-like toxin of type II toxin-antitoxin system CLO1313_RS01510 PF03808 Glycosyl transferase WecB/TagA/CpsF family CLO1313_RS01515 PF13579 Glycosyl transferase 4-like domain CLO1313_RS01515 PF00534 Glycosyl transferases group 1 CLO1313_RS01520 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 CLO1313_RS01520 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) CLO1313_RS01525 PF00456 Transketolase, thiamine diphosphate binding domain CLO1313_RS01530 PF02780 Transketolase, C-terminal domain CLO1313_RS01530 PF02779 Transketolase, pyrimidine binding domain CLO1313_RS01535 PF00005 ABC transporter CLO1313_RS01570 PF00920 Dehydratase family CLO1313_RS01575 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain CLO1313_RS01575 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain CLO1313_RS01575 PF00205 Thiamine pyrophosphate enzyme, central domain CLO1313_RS01580 PF00471 Ribosomal protein L33 CLO1313_RS01585 PF00584 SecE/Sec61-gamma subunits of protein translocation complex CLO1313_RS01590 PF02357 Transcription termination factor nusG CLO1313_RS01590 PF00467 KOW motif CLO1313_RS01595 PF00298 Ribosomal protein L11, RNA binding domain CLO1313_RS01595 PF03946 Ribosomal protein L11, N-terminal domain CLO1313_RS01600 PF00687 Ribosomal protein L1p/L10e family CLO1313_RS01605 PF00466 Ribosomal protein L10 CLO1313_RS01610 PF00542 Ribosomal protein L7/L12 C-terminal domain CLO1313_RS01610 PF16320 Ribosomal protein L7/L12 dimerisation domain CLO1313_RS01615 PF04561 RNA polymerase Rpb2, domain 2 CLO1313_RS01615 PF04563 RNA polymerase beta subunit CLO1313_RS01615 PF04565 RNA polymerase Rpb2, domain 3 CLO1313_RS01615 PF10385 RNA polymerase beta subunit external 1 domain CLO1313_RS01615 PF04560 RNA polymerase Rpb2, domain 7 CLO1313_RS01615 PF00562 RNA polymerase Rpb2, domain 6 CLO1313_RS01620 PF00623 RNA polymerase Rpb1, domain 2 CLO1313_RS01620 PF04983 RNA polymerase Rpb1, domain 3 CLO1313_RS01620 PF04998 RNA polymerase Rpb1, domain 5 CLO1313_RS01620 PF04997 RNA polymerase Rpb1, domain 1 CLO1313_RS01620 PF05000 RNA polymerase Rpb1, domain 4 CLO1313_RS01625 PF01248 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family CLO1313_RS01630 PF00164 Ribosomal protein S12/S23 CLO1313_RS01635 PF00177 Ribosomal protein S7p/S5e CLO1313_RS01640 PF03144 Elongation factor Tu domain 2 CLO1313_RS01640 PF03764 Elongation factor G, domain IV CLO1313_RS01640 PF00009 Elongation factor Tu GTP binding domain CLO1313_RS01640 PF14492 Elongation Factor G, domain II CLO1313_RS01640 PF00679 Elongation factor G C-terminus CLO1313_RS01645 PF00009 Elongation factor Tu GTP binding domain CLO1313_RS01645 PF03144 Elongation factor Tu domain 2 CLO1313_RS01645 PF03143 Elongation factor Tu C-terminal domain CLO1313_RS01650 PF08281 Sigma-70, region 4 CLO1313_RS01650 PF04542 Sigma-70 region 2 CLO1313_RS01665 PF04294 VanW like protein CLO1313_RS01670 PF00381 PTS HPr component phosphorylation site CLO1313_RS01675 PF02896 PEP-utilising enzyme, TIM barrel domain CLO1313_RS01675 PF00391 PEP-utilising enzyme, mobile domain CLO1313_RS01675 PF05524 PEP-utilising enzyme, N-terminal CLO1313_RS01680 PF01541 GIY-YIG catalytic domain CLO1313_RS01680 PF08459 UvrC Helix-hairpin-helix N-terminal CLO1313_RS01680 PF02151 UvrB/uvrC motif CLO1313_RS01690 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase CLO1313_RS01690 PF05698 Bacterial trigger factor protein (TF) C-terminus CLO1313_RS01690 PF05697 Bacterial trigger factor protein (TF) CLO1313_RS01695 PF00574 Clp protease CLO1313_RS01700 PF07724 AAA domain (Cdc48 subfamily) CLO1313_RS01700 PF06689 ClpX C4-type zinc finger CLO1313_RS01700 PF10431 C-terminal, D2-small domain, of ClpB protein CLO1313_RS01705 PF00004 ATPase family associated with various cellular activities (AAA) CLO1313_RS01705 PF05362 Lon protease (S16) C-terminal proteolytic domain CLO1313_RS01710 PF00814 Glycoprotease family CLO1313_RS01715 PF01464 Transglycosylase SLT domain CLO1313_RS01730 PF02811 PHP domain CLO1313_RS01735 PF01668 SmpB protein CLO1313_RS01770 PF03471 Transporter associated domain CLO1313_RS01770 PF00999 Sodium/hydrogen exchanger family CLO1313_RS01770 PF02080 TrkA-C domain CLO1313_RS01775 PF12833 Helix-turn-helix domain CLO1313_RS01775 PF06445 GyrI-like small molecule binding domain CLO1313_RS01780 PF00942 Cellulose binding domain CLO1313_RS01780 PF00759 Glycosyl hydrolase family 9 CLO1313_RS01785 PF00404 Dockerin type I domain CLO1313_RS01785 PF00759 Glycosyl hydrolase family 9 CLO1313_RS01785 PF00942 Cellulose binding domain CLO1313_RS01820 PF00149 Calcineurin-like phosphoesterase CLO1313_RS01825 PF04405 Domain of Unknown function (DUF542) CLO1313_RS01825 PF01814 Hemerythrin HHE cation binding domain CLO1313_RS01830 PF00258 Flavodoxin CLO1313_RS01830 PF00753 Metallo-beta-lactamase superfamily CLO1313_RS01830 PF00301 Rubredoxin CLO1313_RS01835 PF13545 Crp-like helix-turn-helix domain CLO1313_RS01835 PF00027 Cyclic nucleotide-binding domain CLO1313_RS01850 PF04973 Nicotinamide mononucleotide transporter CLO1313_RS01855 PF01381 Helix-turn-helix CLO1313_RS01855 PF13521 AAA domain CLO1313_RS01880 PF00963 Cohesin domain CLO1313_RS01880 PF00395 S-layer homology domain CLO1313_RS01885 PF02607 B12 binding domain CLO1313_RS01885 PF02310 B12 binding domain CLO1313_RS01890 PF01208 Uroporphyrinogen decarboxylase (URO-D) CLO1313_RS01895 PF01208 Uroporphyrinogen decarboxylase (URO-D) CLO1313_RS01900 PF00175 Oxidoreductase NAD-binding domain CLO1313_RS01900 PF00970 Oxidoreductase FAD-binding domain CLO1313_RS01900 PF00111 2Fe-2S iron-sulfur cluster binding domain CLO1313_RS01910 PF09084 NMT1/THI5 like CLO1313_RS01915 PF00005 ABC transporter CLO1313_RS01920 PF00528 Binding-protein-dependent transport system inner membrane component CLO1313_RS01925 PF14535 AMP-binding enzyme C-terminal domain CLO1313_RS01925 PF00501 AMP-binding enzyme CLO1313_RS01930 PF00155 Aminotransferase class I and II CLO1313_RS01935 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase CLO1313_RS01945 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II CLO1313_RS01945 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg CLO1313_RS01950 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain CLO1313_RS01960 PF01042 Endoribonuclease L-PSP CLO1313_RS01965 PF01053 Cys/Met metabolism PLP-dependent enzyme CLO1313_RS01970 PF00155 Aminotransferase class I and II CLO1313_RS01975 PF03063 Prismane/CO dehydrogenase family CLO1313_RS01985 PF00528 Binding-protein-dependent transport system inner membrane component CLO1313_RS01990 PF00005 ABC transporter CLO1313_RS02000 PF00150 Cellulase (glycosyl hydrolase family 5) CLO1313_RS02005 PF00356 Bacterial regulatory proteins, lacI family CLO1313_RS02010 PF00722 Glycosyl hydrolases family 16 CLO1313_RS02015 PF02690 Na+/Pi-cotransporter CLO1313_RS02020 PF02156 Glycosyl hydrolase family 26 CLO1313_RS02025 PF00759 Glycosyl hydrolase family 9 CLO1313_RS02025 PF00942 Cellulose binding domain CLO1313_RS02030 PF00072 Response regulator receiver domain CLO1313_RS02030 PF00486 Transcriptional regulatory protein, C terminal CLO1313_RS02035 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CLO1313_RS02035 PF00512 His Kinase A (phospho-acceptor) domain CLO1313_RS02040 PF01921 tRNA synthetases class I (K) CLO1313_RS02045 PF01584 CheW-like domain CLO1313_RS02050 PF01584 CheW-like domain CLO1313_RS02050 PF02895 Signal transducing histidine kinase, homodimeric domain CLO1313_RS02050 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CLO1313_RS02050 PF01627 Hpt domain CLO1313_RS02050 PF00072 Response regulator receiver domain CLO1313_RS02055 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CLO1313_RS02060 PF03705 CheR methyltransferase, all-alpha domain CLO1313_RS02060 PF01739 CheR methyltransferase, SAM binding domain CLO1313_RS02065 PF01339 CheB methylesterase CLO1313_RS02065 PF00072 Response regulator receiver domain CLO1313_RS02070 PF01408 Oxidoreductase family, NAD-binding Rossmann fold CLO1313_RS02070 PF02894 Oxidoreductase family, C-terminal alpha/beta domain CLO1313_RS02075 PF01595 Cyclin M transmembrane N-terminal domain CLO1313_RS02075 PF00571 CBS domain CLO1313_RS02075 PF03471 Transporter associated domain CLO1313_RS02085 PF00150 Cellulase (glycosyl hydrolase family 5) CLO1313_RS02085 PF00404 Dockerin type I domain CLO1313_RS02095 PF00821 Phosphoenolpyruvate carboxykinase C-terminal P-loop domain CLO1313_RS02095 PF17297 Phosphoenolpyruvate carboxykinase N-terminal domain CLO1313_RS02100 PF16321 Sigma 54 modulation/S30EA ribosomal protein C terminus CLO1313_RS02100 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein CLO1313_RS02105 PF13361 UvrD-like helicase C-terminal domain CLO1313_RS02105 PF00580 UvrD/REP helicase N-terminal domain CLO1313_RS02120 PF02018 Carbohydrate binding domain CLO1313_RS02120 PF00404 Dockerin type I domain CLO1313_RS02120 PF00331 Glycosyl hydrolase family 10 CLO1313_RS02120 PF00756 Putative esterase CLO1313_RS02125 PF13393 Histidyl-tRNA synthetase CLO1313_RS02130 PF01634 ATP phosphoribosyltransferase CLO1313_RS02135 PF00815 Histidinol dehydrogenase CLO1313_RS02140 PF00155 Aminotransferase class I and II CLO1313_RS02145 PF00475 Imidazoleglycerol-phosphate dehydratase CLO1313_RS02150 PF01259 SAICAR synthetase CLO1313_RS02155 PF00117 Glutamine amidotransferase class-I CLO1313_RS02160 PF00977 Histidine biosynthesis protein CLO1313_RS02165 PF00977 Histidine biosynthesis protein CLO1313_RS02170 PF01502 Phosphoribosyl-AMP cyclohydrolase CLO1313_RS02170 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase CLO1313_RS02180 PF00166 Chaperonin 10 Kd subunit CLO1313_RS02185 PF00118 TCP-1/cpn60 chaperonin family CLO1313_RS02200 PF00704 Glycosyl hydrolases family 18 CLO1313_RS02210 PF01272 Transcription elongation factor, GreA/GreB, C-term CLO1313_RS02210 PF03449 Transcription elongation factor, N-terminal CLO1313_RS02215 PF01740 STAS domain CLO1313_RS02225 PF04542 Sigma-70 region 2 CLO1313_RS02225 PF04539 Sigma-70 region 3 CLO1313_RS02225 PF04545 Sigma-70, region 4 CLO1313_RS02255 PF00338 Ribosomal protein S10p/S20e CLO1313_RS02260 PF00297 Ribosomal protein L3 CLO1313_RS02265 PF00573 Ribosomal protein L4/L1 family CLO1313_RS02270 PF00276 Ribosomal protein L23 CLO1313_RS02275 PF00181 Ribosomal Proteins L2, RNA binding domain CLO1313_RS02275 PF03947 Ribosomal Proteins L2, C-terminal domain CLO1313_RS02280 PF00203 Ribosomal protein S19 CLO1313_RS02285 PF00237 Ribosomal protein L22p/L17e CLO1313_RS02290 PF00189 Ribosomal protein S3, C-terminal domain CLO1313_RS02290 PF07650 KH domain CLO1313_RS02295 PF00252 Ribosomal protein L16p/L10e CLO1313_RS02300 PF00831 Ribosomal L29 protein CLO1313_RS02305 PF00366 Ribosomal protein S17 CLO1313_RS02310 PF00238 Ribosomal protein L14p/L23e CLO1313_RS02315 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 CLO1313_RS02320 PF00281 Ribosomal protein L5 CLO1313_RS02320 PF00673 ribosomal L5P family C-terminus CLO1313_RS02325 PF00253 Ribosomal protein S14p/S29e CLO1313_RS02330 PF00410 Ribosomal protein S8 CLO1313_RS02335 PF00347 Ribosomal protein L6 CLO1313_RS02340 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast CLO1313_RS02345 PF00333 Ribosomal protein S5, N-terminal domain CLO1313_RS02345 PF03719 Ribosomal protein S5, C-terminal domain CLO1313_RS02350 PF00327 Ribosomal protein L30p/L7e CLO1313_RS02355 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A CLO1313_RS02360 PF00344 SecY translocase CLO1313_RS02365 PF05191 Adenylate kinase, active site lid CLO1313_RS02370 PF00557 Metallopeptidase family M24 CLO1313_RS02380 PF01176 Translation initiation factor 1A / IF-1 CLO1313_RS02385 PF00444 Ribosomal protein L36 CLO1313_RS02390 PF00416 Ribosomal protein S13/S18 CLO1313_RS02395 PF00411 Ribosomal protein S11 CLO1313_RS02400 PF00163 Ribosomal protein S4/S9 N-terminal domain CLO1313_RS02400 PF01479 S4 domain CLO1313_RS02405 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain CLO1313_RS02405 PF01000 RNA polymerase Rpb3/RpoA insert domain CLO1313_RS02405 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain CLO1313_RS02410 PF01196 Ribosomal protein L17 CLO1313_RS02415 PF00005 ABC transporter CLO1313_RS02420 PF05175 Methyltransferase small domain CLO1313_RS02435 PF01555 DNA methylase CLO1313_RS02465 PF13408 Recombinase zinc beta ribbon domain CLO1313_RS02465 PF07508 Recombinase CLO1313_RS02465 PF00239 Resolvase, N terminal domain CLO1313_RS02470 PF00005 ABC transporter CLO1313_RS02475 PF02361 Cobalt transport protein CLO1313_RS02480 PF00480 ROK family CLO1313_RS02485 PF01416 tRNA pseudouridine synthase CLO1313_RS02490 PF02559 CarD-like/TRCF domain CLO1313_RS02495 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase CLO1313_RS02500 PF00005 ABC transporter CLO1313_RS02505 PF12679 ABC-2 family transporter protein CLO1313_RS02510 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CLO1313_RS02510 PF00497 Bacterial extracellular solute-binding proteins, family 3 CLO1313_RS02510 PF00512 His Kinase A (phospho-acceptor) domain CLO1313_RS02515 PF00989 PAS fold CLO1313_RS02515 PF17203 Single cache domain 3 CLO1313_RS02515 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CLO1313_RS02515 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain CLO1313_RS02520 PF02542 YgbB family CLO1313_RS02525 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) CLO1313_RS02525 PF03129 Anticodon binding domain CLO1313_RS02525 PF04073 Aminoacyl-tRNA editing domain CLO1313_RS02530 PF00188 Cysteine-rich secretory protein family CLO1313_RS02535 PF00404 Dockerin type I domain CLO1313_RS02535 PF00722 Glycosyl hydrolases family 16 CLO1313_RS02540 PF00703 Glycosyl hydrolases family 2 CLO1313_RS02540 PF02837 Glycosyl hydrolases family 2, sugar binding domain CLO1313_RS02540 PF16990 Carbohydrate binding module (family 35) CLO1313_RS02540 PF18368 Exo-beta-D-glucosaminidase Ig-fold domain CLO1313_RS02560 PF00665 Integrase core domain CLO1313_RS02560 PF02796 Helix-turn-helix domain of resolvase CLO1313_RS02610 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle CLO1313_RS02615 PF00005 ABC transporter CLO1313_RS02615 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CLO1313_RS02620 PF00005 ABC transporter CLO1313_RS02620 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CLO1313_RS02625 PF00528 Binding-protein-dependent transport system inner membrane component CLO1313_RS02625 PF12911 N-terminal TM domain of oligopeptide transport permease C CLO1313_RS02630 PF00528 Binding-protein-dependent transport system inner membrane component CLO1313_RS02650 PF00392 Bacterial regulatory proteins, gntR family CLO1313_RS02655 PF00005 ABC transporter CLO1313_RS02665 PF03422 Carbohydrate binding module (family 6) CLO1313_RS02665 PF00457 Glycosyl hydrolases family 11 CLO1313_RS02670 PF00457 Glycosyl hydrolases family 11 CLO1313_RS02670 PF03422 Carbohydrate binding module (family 6) CLO1313_RS02675 PF17746 SfsA N-terminal OB domain CLO1313_RS02675 PF03749 Sugar fermentation stimulation protein RE domain CLO1313_RS02680 PF12791 Anti-sigma factor N-terminus CLO1313_RS02685 PF04542 Sigma-70 region 2 CLO1313_RS02725 PF02743 Cache domain CLO1313_RS02725 PF00672 HAMP domain CLO1313_RS02725 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CLO1313_RS02730 PF00005 ABC transporter CLO1313_RS02735 PF00005 ABC transporter CLO1313_RS02735 PF08402 TOBE domain CLO1313_RS02775 PF01625 Peptide methionine sulfoxide reductase CLO1313_RS02780 PF00724 NADH:flavin oxidoreductase / NADH oxidase family CLO1313_RS02780 PF07992 Pyridine nucleotide-disulphide oxidoreductase CLO1313_RS02805 PF01965 DJ-1/PfpI family CLO1313_RS02815 PF00664 ABC transporter transmembrane region CLO1313_RS02815 PF00005 ABC transporter CLO1313_RS02825 PF01384 Phosphate transporter family CLO1313_RS02840 PF07992 Pyridine nucleotide-disulphide oxidoreductase CLO1313_RS02840 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region CLO1313_RS02840 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster CLO1313_RS02845 PF01476 LysM domain CLO1313_RS02850 PF03734 L,D-transpeptidase catalytic domain CLO1313_RS02850 PF01476 LysM domain CLO1313_RS02860 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain CLO1313_RS02860 PF02777 Iron/manganese superoxide dismutases, C-terminal domain CLO1313_RS02880 PF17189 Glycosyl hydrolase family 30 beta sandwich domain CLO1313_RS02885 PF00586 AIR synthase related protein, N-terminal domain CLO1313_RS02885 PF02769 AIR synthase related protein, C-terminal domain CLO1313_RS02890 PF01924 Hydrogenase formation hypA family CLO1313_RS02895 PF01455 HupF/HypC family CLO1313_RS02900 PF01300 Telomere recombination CLO1313_RS02900 PF00708 Acylphosphatase CLO1313_RS02900 PF17788 HypF Kae1-like domain CLO1313_RS02900 PF07503 HypF finger CLO1313_RS02905 PF02492 CobW/HypB/UreG, nucleotide-binding domain CLO1313_RS02915 PF00374 Nickel-dependent hydrogenase CLO1313_RS02915 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit CLO1313_RS02915 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit CLO1313_RS02925 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit CLO1313_RS02935 PF13244 Domain of unknown function (DUF4040) CLO1313_RS02935 PF00361 Proton-conducting membrane transporter CLO1313_RS02935 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus CLO1313_RS02940 PF01272 Transcription elongation factor, GreA/GreB, C-term CLO1313_RS02940 PF03449 Transcription elongation factor, N-terminal CLO1313_RS02945 PF00285 Citrate synthase, C-terminal domain CLO1313_RS02950 PF00282 Pyridoxal-dependent decarboxylase conserved domain CLO1313_RS02955 PF01584 CheW-like domain CLO1313_RS02960 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CLO1313_RS02960 PF02203 Tar ligand binding domain homologue CLO1313_RS02960 PF00672 HAMP domain CLO1313_RS02985 PF01842 ACT domain CLO1313_RS02985 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain CLO1313_RS02985 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain CLO1313_RS02990 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CLO1313_RS02990 PF00672 HAMP domain CLO1313_RS02990 PF02743 Cache domain CLO1313_RS03005 PF17854 FtsK alpha domain CLO1313_RS03005 PF09397 Ftsk gamma domain CLO1313_RS03005 PF01580 FtsK/SpoIIIE family CLO1313_RS03025 PF00690 Cation transporter/ATPase, N-terminus CLO1313_RS03025 PF00689 Cation transporting ATPase, C-terminus CLO1313_RS03040 PF01098 Cell cycle protein CLO1313_RS03045 PF00905 Penicillin binding protein transpeptidase domain CLO1313_RS03050 PF04002 RadC-like JAB domain CLO1313_RS03060 PF00704 Glycosyl hydrolases family 18 CLO1313_RS03060 PF00041 Fibronectin type III domain CLO1313_RS03065 PF00872 Transposase, Mutator family CLO1313_RS03070 PF05593 RHS Repeat CLO1313_RS03110 PF01885 RNA 2'-phosphotransferase, Tpt1 / KptA family CLO1313_RS03120 PF03965 Penicillinase repressor CLO1313_RS03130 PF05448 Acetyl xylan esterase (AXE1) CLO1313_RS03160 PF00005 ABC transporter CLO1313_RS03170 PF00672 HAMP domain CLO1313_RS03170 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CLO1313_RS03170 PF00512 His Kinase A (phospho-acceptor) domain CLO1313_RS03170 PF13426 PAS domain CLO1313_RS03175 PF00486 Transcriptional regulatory protein, C terminal CLO1313_RS03175 PF00072 Response regulator receiver domain CLO1313_RS03180 PF06866 Protein of unknown function (DUF1256) CLO1313_RS03190 PF13419 Haloacid dehalogenase-like hydrolase CLO1313_RS03200 PF12034 Domain of unknown function (DUF3520) CLO1313_RS03200 PF00092 von Willebrand factor type A domain CLO1313_RS03200 PF12450 von Willebrand factor CLO1313_RS03205 PF13186 Iron-sulfur cluster-binding domain CLO1313_RS03205 PF04055 Radical SAM superfamily CLO1313_RS03210 PF00942 Cellulose binding domain CLO1313_RS03210 PF00963 Cohesin domain CLO1313_RS03210 PF00404 Dockerin type I domain CLO1313_RS03220 PF00963 Cohesin domain CLO1313_RS03220 PF00395 S-layer homology domain CLO1313_RS03225 PF00963 Cohesin domain CLO1313_RS03225 PF00395 S-layer homology domain CLO1313_RS03245 PF01170 Putative RNA methylase family UPF0020 CLO1313_RS03245 PF02926 THUMP domain CLO1313_RS03250 PF04397 LytTr DNA-binding domain CLO1313_RS03250 PF00072 Response regulator receiver domain CLO1313_RS03255 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) CLO1313_RS03260 PF00072 Response regulator receiver domain CLO1313_RS03260 PF08769 Sporulation initiation factor Spo0A C terminal CLO1313_RS03265 PF00216 Bacterial DNA-binding protein CLO1313_RS03275 PF05681 Fumarate hydratase (Fumerase) CLO1313_RS03280 PF05681 Fumarate hydratase (Fumerase) CLO1313_RS03280 PF05683 Fumarase C-terminus CLO1313_RS03290 PF00709 Adenylosuccinate synthetase CLO1313_RS03320 PF01797 Transposase IS200 like CLO1313_RS03325 PF00535 Glycosyl transferase family 2 CLO1313_RS03340 PF00535 Glycosyl transferase family 2 CLO1313_RS03350 PF00535 Glycosyl transferase family 2 CLO1313_RS03355 PF01678 Diaminopimelate epimerase CLO1313_RS03360 PF00155 Aminotransferase class I and II CLO1313_RS03365 PF03816 Cell envelope-related transcriptional attenuator domain CLO1313_RS03375 PF01869 BadF/BadG/BcrA/BcrD ATPase family CLO1313_RS03380 PF06508 Queuosine biosynthesis protein QueC CLO1313_RS03385 PF01242 6-pyruvoyl tetrahydropterin synthase CLO1313_RS03390 PF04055 Radical SAM superfamily CLO1313_RS03395 PF03167 Uracil DNA glycosylase superfamily CLO1313_RS03400 PF03167 Uracil DNA glycosylase superfamily CLO1313_RS03430 PF00899 ThiF family CLO1313_RS03435 PF01797 Transposase IS200 like CLO1313_RS03445 PF04041 beta-1,4-mannooligosaccharide phosphorylase CLO1313_RS03450 PF00483 Nucleotidyl transferase CLO1313_RS03465 PF01238 Phosphomannose isomerase type I CLO1313_RS03470 PF02535 ZIP Zinc transporter CLO1313_RS03475 PF01814 Hemerythrin HHE cation binding domain CLO1313_RS03480 PF01613 Flavin reductase like domain CLO1313_RS03480 PF00301 Rubredoxin CLO1313_RS03485 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II CLO1313_RS03485 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain CLO1313_RS03485 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase CLO1313_RS03485 PF10371 Domain of unknown function CLO1313_RS03485 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg CLO1313_RS03495 PF00963 Cohesin domain CLO1313_RS03495 PF00395 S-layer homology domain CLO1313_RS03505 PF13193 AMP-binding enzyme C-terminal domain CLO1313_RS03505 PF00501 AMP-binding enzyme CLO1313_RS03510 PF00011 Hsp20/alpha crystallin family CLO1313_RS03515 PF01467 Cytidylyltransferase-like CLO1313_RS03515 PF00293 NUDIX domain CLO1313_RS03530 PF03600 Citrate transporter CLO1313_RS03545 PF01270 Glycosyl hydrolases family 8 CLO1313_RS03545 PF00404 Dockerin type I domain CLO1313_RS03550 PF08386 TAP-like protein CLO1313_RS03550 PF00561 alpha/beta hydrolase fold CLO1313_RS03565 PF00082 Subtilase family CLO1313_RS03565 PF05922 Peptidase inhibitor I9 CLO1313_RS03585 PF13472 GDSL-like Lipase/Acylhydrolase family CLO1313_RS03600 PF06445 GyrI-like small molecule binding domain CLO1313_RS03600 PF12833 Helix-turn-helix domain CLO1313_RS03615 PF00005 ABC transporter CLO1313_RS03615 PF00664 ABC transporter transmembrane region CLO1313_RS03620 PF00664 ABC transporter transmembrane region CLO1313_RS03620 PF00005 ABC transporter CLO1313_RS03625 PF07687 Peptidase dimerisation domain CLO1313_RS03625 PF01546 Peptidase family M20/M25/M40 CLO1313_RS03630 PF03186 CobD/Cbib protein CLO1313_RS03635 PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase CLO1313_RS03640 PF02654 Cobalamin-5-phosphate synthase CLO1313_RS03645 PF00300 Histidine phosphatase superfamily (branch 1) CLO1313_RS03655 PF12706 Beta-lactamase superfamily domain CLO1313_RS03660 PF00672 HAMP domain CLO1313_RS03660 PF02743 Cache domain CLO1313_RS03660 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CLO1313_RS03665 PF00682 HMGL-like CLO1313_RS03670 PF00330 Aconitase family (aconitate hydratase) CLO1313_RS03675 PF07729 FCD domain CLO1313_RS03675 PF00392 Bacterial regulatory proteins, gntR family CLO1313_RS03680 PF17126 RsmF rRNA methyltransferase first C-terminal domain CLO1313_RS03680 PF17125 N-terminal domain of 16S rRNA methyltransferase RsmF CLO1313_RS03680 PF01189 16S rRNA methyltransferase RsmB/F CLO1313_RS03685 PF01479 S4 domain CLO1313_RS03685 PF00849 RNA pseudouridylate synthase CLO1313_RS03700 PF12833 Helix-turn-helix domain CLO1313_RS03700 PF00072 Response regulator receiver domain CLO1313_RS03710 PF00483 Nucleotidyl transferase CLO1313_RS03715 PF00483 Nucleotidyl transferase CLO1313_RS03720 PF00781 Diacylglycerol kinase catalytic domain CLO1313_RS03730 PF00005 ABC transporter CLO1313_RS03740 PF02687 FtsX-like permease family CLO1313_RS03740 PF00005 ABC transporter CLO1313_RS03740 PF12704 MacB-like periplasmic core domain CLO1313_RS03760 PF04239 Protein of unknown function (DUF421) CLO1313_RS03765 PF00269 Small, acid-soluble spore proteins, alpha/beta type CLO1313_RS03780 PF07943 Penicillin-binding protein 5, C-terminal domain CLO1313_RS03780 PF00768 D-alanyl-D-alanine carboxypeptidase CLO1313_RS03790 PF02254 TrkA-N domain CLO1313_RS03790 PF02080 TrkA-C domain CLO1313_RS03795 PF02386 Cation transport protein CLO1313_RS03800 PF01702 Queuine tRNA-ribosyltransferase CLO1313_RS03870 PF01594 AI-2E family transporter CLO1313_RS03875 PF01411 tRNA synthetases class II (A) CLO1313_RS03875 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain CLO1313_RS03875 PF02272 DHHA1 domain CLO1313_RS03960 PF00872 Transposase, Mutator family CLO1313_RS04035 PF00872 Transposase, Mutator family CLO1313_RS04060 PF00872 Transposase, Mutator family CLO1313_RS04065 PF00355 Rieske [2Fe-2S] domain CLO1313_RS04065 PF01266 FAD dependent oxidoreductase CLO1313_RS04080 PF00528 Binding-protein-dependent transport system inner membrane component CLO1313_RS04085 PF00005 ABC transporter CLO1313_RS04110 PF01636 Phosphotransferase enzyme family CLO1313_RS04135 PF13180 PDZ domain CLO1313_RS04155 PF00196 Bacterial regulatory proteins, luxR family CLO1313_RS04155 PF17874 MalT-like TPR region CLO1313_RS04175 PF08281 Sigma-70, region 4 CLO1313_RS04175 PF04542 Sigma-70 region 2 CLO1313_RS04180 PF11738 Protein of unknown function (DUF3298) CLO1313_RS04180 PF13739 Deacetylase PdaC CLO1313_RS04205 PF01797 Transposase IS200 like CLO1313_RS04225 PF00232 Glycosyl hydrolase family 1 CLO1313_RS04235 PF03591 AzlC protein CLO1313_RS04240 PF03030 Inorganic H+ pyrophosphatase CLO1313_RS04250 PF01594 AI-2E family transporter CLO1313_RS04255 PF01797 Transposase IS200 like CLO1313_RS04260 PF06271 RDD family CLO1313_RS04265 PF01343 Peptidase family S49 CLO1313_RS04270 PF02659 Putative manganese efflux pump CLO1313_RS04285 PF13732 Domain of unknown function (DUF4162) CLO1313_RS04285 PF00005 ABC transporter CLO1313_RS04300 PF00291 Pyridoxal-phosphate dependent enzyme CLO1313_RS04305 PF00290 Tryptophan synthase alpha chain CLO1313_RS04310 PF01545 Cation efflux family CLO1313_RS04310 PF16916 Dimerisation domain of Zinc Transporter CLO1313_RS04320 PF00486 Transcriptional regulatory protein, C terminal CLO1313_RS04320 PF00072 Response regulator receiver domain CLO1313_RS04335 PF08757 CotH kinase protein CLO1313_RS04340 PF07670 Nucleoside recognition CLO1313_RS04340 PF02421 Ferrous iron transport protein B CLO1313_RS04340 PF17910 FeoB cytosolic helical domain CLO1313_RS04340 PF07664 Ferrous iron transport protein B C terminus CLO1313_RS04350 PF02742 Iron dependent repressor, metal binding and dimerisation domain CLO1313_RS04350 PF01325 Iron dependent repressor, N-terminal DNA binding domain CLO1313_RS04360 PF07745 Glycosyl hydrolase family 53 CLO1313_RS04370 PF00404 Dockerin type I domain CLO1313_RS04375 PF08437 Glycosyl transferase family 8 C-terminal CLO1313_RS04375 PF01501 Glycosyl transferase family 8 CLO1313_RS04380 PF13091 PLD-like domain CLO1313_RS04385 PF00072 Response regulator receiver domain CLO1313_RS04385 PF00486 Transcriptional regulatory protein, C terminal CLO1313_RS04390 PF00672 HAMP domain CLO1313_RS04390 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CLO1313_RS04390 PF00512 His Kinase A (phospho-acceptor) domain CLO1313_RS04390 PF13426 PAS domain CLO1313_RS04395 PF00682 HMGL-like CLO1313_RS04395 PF08502 LeuA allosteric (dimerisation) domain CLO1313_RS04400 PF12146 Serine aminopeptidase, S33 CLO1313_RS04405 PF12627 Probable RNA and SrmB- binding site of polymerase A CLO1313_RS04405 PF13735 tRNA nucleotidyltransferase domain 2 putative CLO1313_RS04405 PF01743 Poly A polymerase head domain CLO1313_RS04415 PF01371 Trp repressor protein CLO1313_RS04430 PF01043 SecA preprotein cross-linking domain CLO1313_RS04430 PF07517 SecA DEAD-like domain CLO1313_RS04430 PF02810 SEC-C motif CLO1313_RS04430 PF07516 SecA Wing and Scaffold domain CLO1313_RS04435 PF02875 Mur ligase family, glutamate ligase domain CLO1313_RS04435 PF08245 Mur ligase middle domain CLO1313_RS04445 PF01734 Patatin-like phospholipase CLO1313_RS04450 PF00291 Pyridoxal-phosphate dependent enzyme CLO1313_RS04450 PF14821 Threonine synthase N terminus CLO1313_RS04455 PF00072 Response regulator receiver domain CLO1313_RS04460 PF01408 Oxidoreductase family, NAD-binding Rossmann fold CLO1313_RS04465 PF01966 HD domain CLO1313_RS04475 PF03447 Homoserine dehydrogenase, NAD binding domain CLO1313_RS04475 PF01842 ACT domain CLO1313_RS04475 PF00742 Homoserine dehydrogenase CLO1313_RS04480 PF00696 Amino acid kinase family CLO1313_RS04480 PF13840 ACT domain CLO1313_RS04510 PF05593 RHS Repeat CLO1313_RS04525 PF01230 HIT domain CLO1313_RS04530 PF00395 S-layer homology domain CLO1313_RS04530 PF00963 Cohesin domain CLO1313_RS04535 PF01797 Transposase IS200 like CLO1313_RS04545 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase CLO1313_RS04560 PF13614 AAA domain CLO1313_RS04570 PF01370 NAD dependent epimerase/dehydratase family CLO1313_RS04590 PF00534 Glycosyl transferases group 1 CLO1313_RS04600 PF00535 Glycosyl transferase family 2 CLO1313_RS04615 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain CLO1313_RS04615 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain CLO1313_RS04615 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain CLO1313_RS04625 PF00436 Single-strand binding protein family CLO1313_RS04630 PF02397 Bacterial sugar transferase CLO1313_RS04635 PF01165 Ribosomal protein S21 CLO1313_RS04645 PF10141 Single-strand DNA-specific exonuclease, C terminal domain CLO1313_RS04645 PF17768 RecJ OB domain CLO1313_RS04645 PF02272 DHHA1 domain CLO1313_RS04645 PF01368 DHH family CLO1313_RS04650 PF00156 Phosphoribosyl transferase domain CLO1313_RS04655 PF13291 ACT domain CLO1313_RS04655 PF04607 Region found in RelA / SpoT proteins CLO1313_RS04655 PF02824 TGS domain CLO1313_RS04660 PF02580 D-Tyr-tRNA(Tyr) deacylase CLO1313_RS04665 PF00753 Metallo-beta-lactamase superfamily CLO1313_RS04670 PF04055 Radical SAM superfamily CLO1313_RS04680 PF00437 Type II/IV secretion system protein CLO1313_RS04720 PF13393 Histidyl-tRNA synthetase CLO1313_RS04720 PF03129 Anticodon binding domain CLO1313_RS04725 PF01336 OB-fold nucleic acid binding domain CLO1313_RS04725 PF00152 tRNA synthetases class II (D, K and N) CLO1313_RS04725 PF02938 GAD domain CLO1313_RS04730 PF10502 Signal peptidase, peptidase S26 CLO1313_RS04755 PF00679 Elongation factor G C-terminus CLO1313_RS04755 PF00009 Elongation factor Tu GTP binding domain CLO1313_RS04755 PF03144 Elongation factor Tu domain 2 CLO1313_RS04755 PF06421 GTP-binding protein LepA C-terminus CLO1313_RS04760 PF06969 HemN C-terminal domain CLO1313_RS04760 PF04055 Radical SAM superfamily CLO1313_RS04765 PF01628 HrcA protein C terminal domain CLO1313_RS04770 PF01025 GrpE CLO1313_RS04775 PF00012 Hsp70 protein CLO1313_RS04780 PF01556 DnaJ C terminal domain CLO1313_RS04780 PF00226 DnaJ domain CLO1313_RS04780 PF00684 DnaJ central domain CLO1313_RS04790 PF04452 RNA methyltransferase CLO1313_RS04795 PF00072 Response regulator receiver domain CLO1313_RS04805 PF03755 YicC-like family, N-terminal region CLO1313_RS04805 PF08340 Domain of unknown function (DUF1732) CLO1313_RS04810 PF04025 Domain of unknown function (DUF370) CLO1313_RS04815 PF00625 Guanylate kinase CLO1313_RS04820 PF01192 RNA polymerase Rpb6 CLO1313_RS04825 PF04127 DNA / pantothenate metabolism flavoprotein CLO1313_RS04825 PF02441 Flavoprotein CLO1313_RS04830 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) CLO1313_RS04830 PF03129 Anticodon binding domain CLO1313_RS04835 PF17203 Single cache domain 3 CLO1313_RS04835 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain CLO1313_RS04835 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CLO1313_RS04835 PF00989 PAS fold CLO1313_RS04845 PF13186 Iron-sulfur cluster-binding domain CLO1313_RS04845 PF04055 Radical SAM superfamily CLO1313_RS04850 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain CLO1313_RS04850 PF02896 PEP-utilising enzyme, TIM barrel domain CLO1313_RS04850 PF00391 PEP-utilising enzyme, mobile domain CLO1313_RS04855 PF06452 Carbohydrate family 9 binding domain-like CLO1313_RS04855 PF02018 Carbohydrate binding domain CLO1313_RS04855 PF00395 S-layer homology domain CLO1313_RS04855 PF00331 Glycosyl hydrolase family 10 CLO1313_RS04870 PF07883 Cupin domain CLO1313_RS04875 PF13638 PIN domain CLO1313_RS04875 PF02562 PhoH-like protein CLO1313_RS04880 PF13439 Glycosyltransferase Family 4 CLO1313_RS04880 PF00534 Glycosyl transferases group 1 CLO1313_RS04885 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain CLO1313_RS04885 PF00753 Metallo-beta-lactamase superfamily CLO1313_RS04885 PF17770 Ribonuclease J C-terminal domain CLO1313_RS04890 PF05636 HIGH Nucleotidyl Transferase CLO1313_RS04905 PF14693 Ribosomal protein TL5, C-terminal domain CLO1313_RS04905 PF01386 Ribosomal L25p family CLO1313_RS04910 PF02277 Phosphoribosyltransferase CLO1313_RS04920 PF01812 5-formyltetrahydrofolate cyclo-ligase family CLO1313_RS04930 PF00072 Response regulator receiver domain CLO1313_RS04935 PF10143 2,3-bisphosphoglycerate-independent phosphoglycerate mutase CLO1313_RS04935 PF01676 Metalloenzyme superfamily CLO1313_RS04955 PF00072 Response regulator receiver domain CLO1313_RS04955 PF00486 Transcriptional regulatory protein, C terminal CLO1313_RS04960 PF00672 HAMP domain CLO1313_RS04960 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CLO1313_RS04960 PF00512 His Kinase A (phospho-acceptor) domain CLO1313_RS04965 PF13180 PDZ domain CLO1313_RS04970 PF01966 HD domain CLO1313_RS04975 PF08323 Starch synthase catalytic domain CLO1313_RS04975 PF00534 Glycosyl transferases group 1 CLO1313_RS04980 PF00730 HhH-GPD superfamily base excision DNA repair protein CLO1313_RS04980 PF00633 Helix-hairpin-helix motif CLO1313_RS04985 PF00990 Diguanylate cyclase, GGDEF domain CLO1313_RS04995 PF04226 Transglycosylase associated protein CLO1313_RS05000 PF00830 Ribosomal L28 family CLO1313_RS05005 PF00271 Helicase conserved C-terminal domain CLO1313_RS05005 PF00270 DEAD/DEAH box helicase CLO1313_RS05005 PF17191 RecG wedge domain CLO1313_RS05015 PF01467 Cytidylyltransferase-like CLO1313_RS05025 PF07670 Nucleoside recognition CLO1313_RS05030 PF12791 Anti-sigma factor N-terminus CLO1313_RS05030 PF05270 Alpha-L-arabinofuranosidase B (ABFB) domain CLO1313_RS05035 PF04542 Sigma-70 region 2 CLO1313_RS05040 PF04616 Glycosyl hydrolases family 43 CLO1313_RS05040 PF03422 Carbohydrate binding module (family 6) CLO1313_RS05055 PF05384 Sensor protein DegS CLO1313_RS05055 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CLO1313_RS05055 PF07730 Histidine kinase CLO1313_RS05060 PF00072 Response regulator receiver domain CLO1313_RS05060 PF00196 Bacterial regulatory proteins, luxR family CLO1313_RS05065 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CLO1313_RS05065 PF00672 HAMP domain CLO1313_RS05065 PF02743 Cache domain CLO1313_RS05070 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain CLO1313_RS05070 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III CLO1313_RS05070 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II CLO1313_RS05070 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I CLO1313_RS05075 PF01336 OB-fold nucleic acid binding domain CLO1313_RS05075 PF17657 Bacterial DNA polymerase III alpha subunit finger domain CLO1313_RS05075 PF14579 Helix-hairpin-helix motif CLO1313_RS05075 PF07733 Bacterial DNA polymerase III alpha NTPase domain CLO1313_RS05075 PF02811 PHP domain CLO1313_RS05080 PF02081 Tryptophan RNA-binding attenuator protein CLO1313_RS05090 PF00365 Phosphofructokinase CLO1313_RS05100 PF01066 CDP-alcohol phosphatidyltransferase CLO1313_RS05115 PF14310 Fibronectin type III-like domain CLO1313_RS05115 PF00933 Glycosyl hydrolase family 3 N terminal domain CLO1313_RS05115 PF01915 Glycosyl hydrolase family 3 C-terminal domain CLO1313_RS05135 PF00860 Permease family CLO1313_RS05140 PF00731 AIR carboxylase CLO1313_RS05145 PF00156 Phosphoribosyl transferase domain CLO1313_RS05150 PF02769 AIR synthase related protein, C-terminal domain CLO1313_RS05150 PF00586 AIR synthase related protein, N-terminal domain CLO1313_RS05155 PF00551 Formyl transferase CLO1313_RS05160 PF02142 MGS-like domain CLO1313_RS05160 PF01808 AICARFT/IMPCHase bienzyme CLO1313_RS05165 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain CLO1313_RS05165 PF02843 Phosphoribosylglycinamide synthetase, C domain CLO1313_RS05165 PF02844 Phosphoribosylglycinamide synthetase, N domain CLO1313_RS05170 PF00535 Glycosyl transferase family 2 CLO1313_RS05180 PF01467 Cytidylyltransferase-like CLO1313_RS05185 PF01966 HD domain CLO1313_RS05200 PF08264 Anticodon-binding domain of tRNA CLO1313_RS05200 PF13603 Leucyl-tRNA synthetase, Domain 2 CLO1313_RS05200 PF00133 tRNA synthetases class I (I, L, M and V) CLO1313_RS05200 PF09334 tRNA synthetases class I (M) CLO1313_RS05205 PF00041 Fibronectin type III domain CLO1313_RS05205 PF00704 Glycosyl hydrolases family 18 CLO1313_RS05210 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CLO1313_RS05210 PF12729 Four helix bundle sensory module for signal transduction CLO1313_RS05210 PF00672 HAMP domain CLO1313_RS05220 PF00501 AMP-binding enzyme CLO1313_RS05225 PF07943 Penicillin-binding protein 5, C-terminal domain CLO1313_RS05225 PF00768 D-alanyl-D-alanine carboxypeptidase CLO1313_RS05230 PF10531 SLBB domain CLO1313_RS05240 PF02824 TGS domain CLO1313_RS05240 PF03129 Anticodon binding domain CLO1313_RS05240 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain CLO1313_RS05240 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) CLO1313_RS05250 PF00303 Thymidylate synthase CLO1313_RS05255 PF00186 Dihydrofolate reductase CLO1313_RS05260 PF00707 Translation initiation factor IF-3, C-terminal domain CLO1313_RS05260 PF05198 Translation initiation factor IF-3, N-terminal domain CLO1313_RS05265 PF01632 Ribosomal protein L35 CLO1313_RS05270 PF00453 Ribosomal protein L20 CLO1313_RS05275 PF08032 RNA 2'-O ribose methyltransferase substrate binding CLO1313_RS05275 PF00588 SpoU rRNA Methylase family CLO1313_RS05280 PF06165 Glycosyltransferase family 36 CLO1313_RS05280 PF10091 Putative glucoamylase CLO1313_RS05280 PF17167 Glycosyl hydrolase 36 superfamily, catalytic domain CLO1313_RS05295 PF03588 Leucyl/phenylalanyl-tRNA protein transferase CLO1313_RS05300 PF07724 AAA domain (Cdc48 subfamily) CLO1313_RS05300 PF10431 C-terminal, D2-small domain, of ClpB protein CLO1313_RS05300 PF17871 AAA lid domain CLO1313_RS05300 PF00004 ATPase family associated with various cellular activities (AAA) CLO1313_RS05300 PF02861 Clp amino terminal domain, pathogenicity island component CLO1313_RS05305 PF02617 ATP-dependent Clp protease adaptor protein ClpS CLO1313_RS05310 PF01925 Sulfite exporter TauE/SafE CLO1313_RS05315 PF01925 Sulfite exporter TauE/SafE CLO1313_RS05330 PF00291 Pyridoxal-phosphate dependent enzyme CLO1313_RS05355 PF08298 PrkA AAA domain CLO1313_RS05355 PF06798 PrkA serine protein kinase C-terminal domain CLO1313_RS05360 PF04285 Protein of unknown function (DUF444) CLO1313_RS05365 PF04293 SpoVR like protein CLO1313_RS05375 PF01048 Phosphorylase superfamily CLO1313_RS05380 PF05221 S-adenosyl-L-homocysteine hydrolase CLO1313_RS05380 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain CLO1313_RS05385 PF01979 Amidohydrolase family CLO1313_RS05425 PF00872 Transposase, Mutator family CLO1313_RS05435 PF13419 Haloacid dehalogenase-like hydrolase CLO1313_RS05445 PF00005 ABC transporter CLO1313_RS05460 PF07859 alpha/beta hydrolase fold CLO1313_RS05475 PF07726 ATPase family associated with various cellular activities (AAA) CLO1313_RS05475 PF17863 AAA lid domain CLO1313_RS05485 PF13559 Domain of unknown function (DUF4129) CLO1313_RS05485 PF11992 Domain of unknown function (DUF3488) CLO1313_RS05485 PF01841 Transglutaminase-like superfamily CLO1313_RS05495 PF08141 Small acid-soluble spore protein H family CLO1313_RS05505 PF17956 Nicotinate phosphoribosyltransferase C-terminal domain CLO1313_RS05505 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family CLO1313_RS05505 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain CLO1313_RS05510 PF13690 Chemotaxis phosphatase CheX CLO1313_RS05540 PF01113 Dihydrodipicolinate reductase, N-terminus CLO1313_RS05540 PF05173 Dihydrodipicolinate reductase, C-terminus CLO1313_RS05550 PF01871 AMMECR1 CLO1313_RS05550 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase CLO1313_RS05560 PF02457 DisA bacterial checkpoint controller nucleotide-binding CLO1313_RS05575 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II CLO1313_RS05575 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I CLO1313_RS05575 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain CLO1313_RS05575 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III CLO1313_RS05580 PF01380 SIS domain CLO1313_RS05585 PF01022 Bacterial regulatory protein, arsR family CLO1313_RS05590 PF01758 Sodium Bile acid symporter family CLO1313_RS05595 PF01451 Low molecular weight phosphotyrosine protein phosphatase CLO1313_RS05620 PF00437 Type II/IV secretion system protein CLO1313_RS05620 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain CLO1313_RS05625 PF00437 Type II/IV secretion system protein CLO1313_RS05630 PF00482 Type II secretion system (T2SS), protein F CLO1313_RS05635 PF07963 Prokaryotic N-terminal methylation motif CLO1313_RS05635 PF00114 Pilin (bacterial filament) CLO1313_RS05670 PF00574 Clp protease CLO1313_RS05680 PF17854 FtsK alpha domain CLO1313_RS05680 PF01580 FtsK/SpoIIIE family CLO1313_RS05680 PF09397 Ftsk gamma domain CLO1313_RS05685 PF08497 Radical SAM N-terminal CLO1313_RS05685 PF11842 Domain of unknown function (DUF3362) CLO1313_RS05685 PF04055 Radical SAM superfamily CLO1313_RS05690 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain CLO1313_RS05690 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain CLO1313_RS05700 PF01966 HD domain CLO1313_RS05700 PF00013 KH domain CLO1313_RS05700 PF12072 Domain of unknown function (DUF3552) CLO1313_RS05705 PF13277 YmdB-like protein CLO1313_RS05710 PF04232 Stage V sporulation protein S (SpoVS) CLO1313_RS05725 PF16363 GDP-mannose 4,6 dehydratase CLO1313_RS05730 PF13439 Glycosyltransferase Family 4 CLO1313_RS05730 PF00534 Glycosyl transferases group 1 CLO1313_RS05740 PF01636 Phosphotransferase enzyme family CLO1313_RS05760 PF00483 Nucleotidyl transferase CLO1313_RS05780 PF05949 Bacterial protein of unknown function (DUF881) CLO1313_RS05785 PF01522 Polysaccharide deacetylase CLO1313_RS05790 PF07873 YabP family CLO1313_RS05800 PF02562 PhoH-like protein CLO1313_RS05805 PF07698 7TM receptor with intracellular HD hydrolase CLO1313_RS05805 PF07697 7TM-HD extracellular CLO1313_RS05805 PF01966 HD domain CLO1313_RS05810 PF02130 Uncharacterized protein family UPF0054 CLO1313_RS05815 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region CLO1313_RS05820 PF01926 50S ribosome-binding GTPase CLO1313_RS05820 PF07650 KH domain CLO1313_RS05825 PF02565 Recombination protein O C terminal CLO1313_RS05825 PF11967 Recombination protein O N terminal CLO1313_RS05835 PF00266 Aminotransferase class-V CLO1313_RS05840 PF02568 Thiamine biosynthesis protein (ThiI) CLO1313_RS05840 PF02926 THUMP domain CLO1313_RS05845 PF04294 VanW like protein CLO1313_RS05865 PF00464 Serine hydroxymethyltransferase CLO1313_RS05870 PF04024 PspC domain CLO1313_RS05875 PF01841 Transglutaminase-like superfamily CLO1313_RS05875 PF11992 Domain of unknown function (DUF3488) CLO1313_RS05875 PF13559 Domain of unknown function (DUF4129) CLO1313_RS05885 PF07726 ATPase family associated with various cellular activities (AAA) CLO1313_RS05885 PF17863 AAA lid domain CLO1313_RS05890 PF00056 lactate/malate dehydrogenase, NAD binding domain CLO1313_RS05890 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain CLO1313_RS05895 PF02464 Competence-damaged protein CLO1313_RS05895 PF18146 Damage-inducible protein CinA KH domain CLO1313_RS05895 PF00994 Probable molybdopterin binding domain CLO1313_RS05900 PF03023 Lipid II flippase MurJ CLO1313_RS05905 PF00154 recA bacterial DNA recombination protein CLO1313_RS05910 PF02631 RecX family CLO1313_RS05915 PF01694 Rhomboid family CLO1313_RS05955 PF08245 Mur ligase middle domain CLO1313_RS05975 PF06144 DNA polymerase III, delta subunit CLO1313_RS05980 PF01649 Ribosomal protein S20 CLO1313_RS05985 PF03418 Germination protease CLO1313_RS05990 PF11741 AMIN domain CLO1313_RS05990 PF01520 N-acetylmuramoyl-L-alanine amidase CLO1313_RS06000 PF12826 Helix-hairpin-helix motif CLO1313_RS06000 PF00533 BRCA1 C Terminus (BRCT) domain CLO1313_RS06000 PF03120 NAD-dependent DNA ligase OB-fold domain CLO1313_RS06000 PF01653 NAD-dependent DNA ligase adenylation domain CLO1313_RS06000 PF03119 NAD-dependent DNA ligase C4 zinc finger domain CLO1313_RS06010 PF02686 Glu-tRNAGln amidotransferase C subunit CLO1313_RS06015 PF01425 Amidase CLO1313_RS06020 PF02934 GatB/GatE catalytic domain CLO1313_RS06020 PF02637 GatB domain CLO1313_RS06030 PF01515 Phosphate acetyl/butaryl transferase CLO1313_RS06035 PF00871 Acetokinase family CLO1313_RS06045 PF01783 Ribosomal L32p protein family CLO1313_RS06055 PF01926 50S ribosome-binding GTPase CLO1313_RS06055 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal CLO1313_RS06060 PF02660 Glycerol-3-phosphate acyltransferase CLO1313_RS06065 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus CLO1313_RS06065 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus CLO1313_RS06070 PF09547 Stage IV sporulation protein A (spore_IV_A) CLO1313_RS06075 PF01547 Bacterial extracellular solute-binding protein CLO1313_RS06080 PF00528 Binding-protein-dependent transport system inner membrane component CLO1313_RS06085 PF00528 Binding-protein-dependent transport system inner membrane component CLO1313_RS06095 PF04122 Putative cell wall binding repeat 2 CLO1313_RS06095 PF01520 N-acetylmuramoyl-L-alanine amidase CLO1313_RS06110 PF01713 Smr domain CLO1313_RS06110 PF00488 MutS domain V CLO1313_RS06115 PF01594 AI-2E family transporter CLO1313_RS06120 PF04545 Sigma-70, region 4 CLO1313_RS06120 PF04542 Sigma-70 region 2 CLO1313_RS06125 PF03717 Penicillin-binding Protein dimerisation domain CLO1313_RS06125 PF00905 Penicillin binding protein transpeptidase domain CLO1313_RS06130 PF01136 Peptidase family U32 CLO1313_RS06130 PF16325 Peptidase family U32 C-terminal domain CLO1313_RS06135 PF01596 O-methyltransferase CLO1313_RS06140 PF02618 YceG-like family CLO1313_RS06145 PF00679 Elongation factor G C-terminus CLO1313_RS06145 PF14492 Elongation Factor G, domain II CLO1313_RS06145 PF03144 Elongation factor Tu domain 2 CLO1313_RS06145 PF00009 Elongation factor Tu GTP binding domain CLO1313_RS06150 PF00318 Ribosomal protein S2 CLO1313_RS06155 PF00889 Elongation factor TS CLO1313_RS06160 PF00696 Amino acid kinase family CLO1313_RS06165 PF01765 Ribosome recycling factor CLO1313_RS06175 PF01255 Putative undecaprenyl diphosphate synthase CLO1313_RS06185 PF13288 DXP reductoisomerase C-terminal domain CLO1313_RS06185 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase CLO1313_RS06185 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain CLO1313_RS06190 PF13180 PDZ domain CLO1313_RS06190 PF02163 Peptidase family M50 CLO1313_RS06195 PF04551 GcpE protein CLO1313_RS06200 PF11490 DNA polymerase III polC-type N-terminus II CLO1313_RS06200 PF07733 Bacterial DNA polymerase III alpha NTPase domain CLO1313_RS06200 PF01336 OB-fold nucleic acid binding domain CLO1313_RS06200 PF17657 Bacterial DNA polymerase III alpha subunit finger domain CLO1313_RS06200 PF14579 Helix-hairpin-helix motif CLO1313_RS06200 PF02811 PHP domain CLO1313_RS06200 PF00929 Exonuclease CLO1313_RS06205 PF02576 RimP N-terminal domain CLO1313_RS06205 PF17384 RimP C-terminal SH3 domain CLO1313_RS06210 PF13184 NusA-like KH domain CLO1313_RS06210 PF08529 NusA N-terminal domain CLO1313_RS06210 PF00575 S1 RNA binding domain CLO1313_RS06215 PF04296 Protein of unknown function (DUF448) CLO1313_RS06220 PF01248 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family CLO1313_RS06225 PF04760 Translation initiation factor IF-2, N-terminal region CLO1313_RS06225 PF00009 Elongation factor Tu GTP binding domain CLO1313_RS06225 PF11987 Translation-initiation factor 2 CLO1313_RS06230 PF02033 Ribosome-binding factor A CLO1313_RS06235 PF01368 DHH family CLO1313_RS06235 PF02272 DHHA1 domain CLO1313_RS06240 PF16198 tRNA pseudouridylate synthase B C-terminal domain CLO1313_RS06240 PF01509 TruB family pseudouridylate synthase (N terminal domain) CLO1313_RS06245 PF01687 Riboflavin kinase CLO1313_RS06245 PF06574 FAD synthetase CLO1313_RS06250 PF05193 Peptidase M16 inactive domain CLO1313_RS06255 PF00675 Insulinase (Peptidase family M16) CLO1313_RS06255 PF05193 Peptidase M16 inactive domain CLO1313_RS06260 PF01790 Prolipoprotein diacylglyceryl transferase CLO1313_RS06265 PF01098 Cell cycle protein CLO1313_RS06270 PF02381 MraZ protein, putative antitoxin-like CLO1313_RS06275 PF01795 MraW methylase family CLO1313_RS06285 PF00905 Penicillin binding protein transpeptidase domain CLO1313_RS06285 PF03793 PASTA domain CLO1313_RS06285 PF03717 Penicillin-binding Protein dimerisation domain CLO1313_RS06290 PF01225 Mur ligase family, catalytic domain CLO1313_RS06290 PF02875 Mur ligase family, glutamate ligase domain CLO1313_RS06290 PF08245 Mur ligase middle domain CLO1313_RS06295 PF01225 Mur ligase family, catalytic domain CLO1313_RS06295 PF02875 Mur ligase family, glutamate ligase domain CLO1313_RS06295 PF08245 Mur ligase middle domain CLO1313_RS06300 PF00953 Glycosyl transferase family 4 CLO1313_RS06305 PF01098 Cell cycle protein CLO1313_RS06310 PF04101 Glycosyltransferase family 28 C-terminal domain CLO1313_RS06310 PF03033 Glycosyltransferase family 28 N-terminal domain CLO1313_RS06315 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) CLO1313_RS06330 PF00872 Transposase, Mutator family CLO1313_RS06340 PF00580 UvrD/REP helicase N-terminal domain CLO1313_RS06340 PF13361 UvrD-like helicase C-terminal domain CLO1313_RS06355 PF12557 Cob(I)alamin adenosyltransferase N terminal CLO1313_RS06355 PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP CLO1313_RS06360 PF13840 ACT domain CLO1313_RS06360 PF00696 Amino acid kinase family CLO1313_RS06365 PF05173 Dihydrodipicolinate reductase, C-terminus CLO1313_RS06365 PF01113 Dihydrodipicolinate reductase, N-terminus CLO1313_RS06370 PF00701 Dihydrodipicolinate synthetase family CLO1313_RS06375 PF02774 Semialdehyde dehydrogenase, dimerisation domain CLO1313_RS06375 PF01118 Semialdehyde dehydrogenase, NAD binding domain CLO1313_RS06380 PF04122 Putative cell wall binding repeat 2 CLO1313_RS06380 PF08486 Stage II sporulation protein CLO1313_RS06385 PF02547 Queuosine biosynthesis protein CLO1313_RS06390 PF01702 Queuine tRNA-ribosyltransferase CLO1313_RS06395 PF02699 Preprotein translocase subunit CLO1313_RS06410 PF00156 Phosphoribosyl transferase domain CLO1313_RS06420 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain CLO1313_RS06420 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain CLO1313_RS06425 PF01979 Amidohydrolase family CLO1313_RS06430 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family CLO1313_RS06435 PF00117 Glutamine amidotransferase class-I CLO1313_RS06435 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain CLO1313_RS06440 PF02142 MGS-like domain CLO1313_RS06440 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain CLO1313_RS06440 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain CLO1313_RS06445 PF10418 Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B CLO1313_RS06450 PF01180 Dihydroorotate dehydrogenase CLO1313_RS06455 PF00300 Histidine phosphatase superfamily (branch 1) CLO1313_RS06475 PF18693 TRAM domain CLO1313_RS06475 PF04055 Radical SAM superfamily CLO1313_RS06475 PF00919 Uncharacterized protein family UPF0004 CLO1313_RS06480 PF01066 CDP-alcohol phosphatidyltransferase CLO1313_RS06495 PF03061 Thioesterase superfamily CLO1313_RS06500 PF02504 Fatty acid synthesis protein CLO1313_RS06505 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III CLO1313_RS06505 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal CLO1313_RS06510 PF00698 Acyl transferase domain CLO1313_RS06520 PF00550 Phosphopantetheine attachment site CLO1313_RS06525 PF00109 Beta-ketoacyl synthase, N-terminal domain CLO1313_RS06525 PF02801 Beta-ketoacyl synthase, C-terminal domain CLO1313_RS06530 PF00035 Double-stranded RNA binding motif CLO1313_RS06530 PF14622 Ribonuclease-III-like CLO1313_RS06540 PF04232 Stage V sporulation protein S (SpoVS) CLO1313_RS06545 PF04166 Pyridoxal phosphate biosynthetic protein PdxA CLO1313_RS06550 PF06470 SMC proteins Flexible Hinge Domain CLO1313_RS06550 PF02463 RecF/RecN/SMC N terminal domain CLO1313_RS06555 PF00448 SRP54-type protein, GTPase domain CLO1313_RS06555 PF02881 SRP54-type protein, helical bundle domain CLO1313_RS06575 PF16654 Diaminopimelic acid dehydrogenase C-terminal domain CLO1313_RS06610 PF00749 tRNA synthetases class I (E and Q), catalytic domain CLO1313_RS06610 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain CLO1313_RS06630 PF00404 Dockerin type I domain CLO1313_RS06630 PF02018 Carbohydrate binding domain CLO1313_RS06630 PF00331 Glycosyl hydrolase family 10 CLO1313_RS06630 PF00756 Putative esterase CLO1313_RS06635 PF02578 Multi-copper polyphenol oxidoreductase laccase CLO1313_RS06640 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle CLO1313_RS06645 PF01252 Signal peptidase (SPase) II CLO1313_RS06650 PF00849 RNA pseudouridylate synthase CLO1313_RS06650 PF01479 S4 domain CLO1313_RS06660 PF01966 HD domain CLO1313_RS06660 PF00013 KH domain CLO1313_RS06660 PF12072 Domain of unknown function (DUF3552) CLO1313_RS06665 PF02355 Protein export membrane protein CLO1313_RS06665 PF07549 SecD/SecF GG Motif CLO1313_RS06670 PF07549 SecD/SecF GG Motif CLO1313_RS06670 PF02355 Protein export membrane protein CLO1313_RS06675 PF02548 Ketopantoate hydroxymethyltransferase CLO1313_RS06680 PF02569 Pantoate-beta-alanine ligase CLO1313_RS06685 PF02261 Aspartate decarboxylase CLO1313_RS06695 PF01966 HD domain CLO1313_RS06695 PF11871 Domain of unknown function (DUF3391) CLO1313_RS06700 PF13286 Phosphohydrolase-associated domain CLO1313_RS06700 PF01966 HD domain CLO1313_RS06705 PF10410 DnaB-helicase binding domain of primase CLO1313_RS06705 PF08275 DNA primase catalytic core, N-terminal domain CLO1313_RS06705 PF01807 CHC2 zinc finger CLO1313_RS06710 PF03979 Sigma-70 factor, region 1.1 CLO1313_RS06710 PF04545 Sigma-70, region 4 CLO1313_RS06710 PF04539 Sigma-70 region 3 CLO1313_RS06710 PF04542 Sigma-70 region 2 CLO1313_RS06710 PF00140 Sigma-70 factor, region 1.2 CLO1313_RS06730 PF04816 tRNA (adenine(22)-N(1))-methyltransferase CLO1313_RS06735 PF01784 NIF3 (NGG1p interacting factor 3) CLO1313_RS06740 PF00072 Response regulator receiver domain CLO1313_RS06745 PF04542 Sigma-70 region 2 CLO1313_RS06745 PF08281 Sigma-70, region 4 CLO1313_RS06765 PF00476 DNA polymerase family A CLO1313_RS06765 PF01367 5'-3' exonuclease, C-terminal SAM fold CLO1313_RS06765 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain CLO1313_RS06770 PF01121 Dephospho-CoA kinase CLO1313_RS06785 PF00892 EamA-like transporter family CLO1313_RS06790 PF00990 Diguanylate cyclase, GGDEF domain CLO1313_RS06795 PF18152 DAHP synthase ferredoxin-like domain CLO1313_RS06795 PF00793 DAHP synthetase I family CLO1313_RS06800 PF01584 CheW-like domain CLO1313_RS06805 PF06071 Protein of unknown function (DUF933) CLO1313_RS06805 PF01926 50S ribosome-binding GTPase CLO1313_RS06815 PF04715 Anthranilate synthase component I, N terminal region CLO1313_RS06815 PF00425 chorismate binding enzyme CLO1313_RS06820 PF00591 Glycosyl transferase family, a/b domain CLO1313_RS06820 PF02885 Glycosyl transferase family, helical bundle domain CLO1313_RS06820 PF00117 Glutamine amidotransferase class-I CLO1313_RS06825 PF00591 Glycosyl transferase family, a/b domain CLO1313_RS06825 PF02885 Glycosyl transferase family, helical bundle domain CLO1313_RS06830 PF00218 Indole-3-glycerol phosphate synthase CLO1313_RS06835 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase CLO1313_RS06875 PF00120 Glutamine synthetase, catalytic domain CLO1313_RS06875 PF12437 Glutamine synthetase type III N terminal CLO1313_RS06875 PF18318 Glutamine synthetase C-terminal domain CLO1313_RS06885 PF03816 Cell envelope-related transcriptional attenuator domain CLO1313_RS06890 PF02915 Rubrerythrin CLO1313_RS06900 PF12127 SigmaW regulon antibacterial CLO1313_RS06905 PF01957 NfeD-like C-terminal, partner-binding CLO1313_RS06905 PF01972 Serine dehydrogenase proteinase CLO1313_RS06910 PF01063 Amino-transferase class IV CLO1313_RS06920 PF18317 Shikimate 5'-dehydrogenase C-terminal domain CLO1313_RS06920 PF01488 Shikimate / quinate 5-dehydrogenase CLO1313_RS06920 PF08501 Shikimate dehydrogenase substrate binding domain CLO1313_RS06925 PF00437 Type II/IV secretion system protein CLO1313_RS06925 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain CLO1313_RS06930 PF06750 Bacterial Peptidase A24 N-terminal domain CLO1313_RS06930 PF01478 Type IV leader peptidase family CLO1313_RS06940 PF01261 Xylose isomerase-like TIM barrel CLO1313_RS06945 PF01220 Dehydroquinase class II CLO1313_RS06950 PF01321 Creatinase/Prolidase N-terminal domain CLO1313_RS06950 PF00557 Metallopeptidase family M24 CLO1313_RS06955 PF01132 Elongation factor P (EF-P) OB domain CLO1313_RS06955 PF08207 Elongation factor P (EF-P) KOW-like domain CLO1313_RS06955 PF09285 Elongation factor P, C-terminal CLO1313_RS06965 PF01797 Transposase IS200 like CLO1313_RS06980 PF06686 Stage III sporulation protein AC/AD protein family CLO1313_RS06985 PF06686 Stage III sporulation protein AC/AD protein family CLO1313_RS06990 PF09546 Stage III sporulation protein AE (spore_III_AE) CLO1313_RS07010 PF03780 Asp23 family, cell envelope-related function CLO1313_RS07025 PF01029 NusB family CLO1313_RS07030 PF02601 Exonuclease VII, large subunit CLO1313_RS07030 PF13742 OB-fold nucleic acid binding domain CLO1313_RS07035 PF02609 Exonuclease VII small subunit CLO1313_RS07040 PF00348 Polyprenyl synthetase CLO1313_RS07045 PF02681 Divergent PAP2 family CLO1313_RS07055 PF02780 Transketolase, C-terminal domain CLO1313_RS07055 PF02779 Transketolase, pyrimidine binding domain CLO1313_RS07055 PF13292 1-deoxy-D-xylulose-5-phosphate synthase CLO1313_RS07060 PF01728 FtsJ-like methyltransferase CLO1313_RS07060 PF01479 S4 domain CLO1313_RS07070 PF02927 Cellulase N-terminal ig-like domain CLO1313_RS07070 PF00404 Dockerin type I domain CLO1313_RS07070 PF00759 Glycosyl hydrolase family 9 CLO1313_RS07080 PF00150 Cellulase (glycosyl hydrolase family 5) CLO1313_RS07080 PF12891 Glycoside hydrolase family 44 CLO1313_RS07080 PF00942 Cellulose binding domain CLO1313_RS07095 PF13732 Domain of unknown function (DUF4162) CLO1313_RS07095 PF00005 ABC transporter CLO1313_RS07105 PF00990 Diguanylate cyclase, GGDEF domain CLO1313_RS07110 PF01513 ATP-NAD kinase CLO1313_RS07115 PF01316 Arginine repressor, DNA binding domain CLO1313_RS07115 PF02863 Arginine repressor, C-terminal domain CLO1313_RS07120 PF02463 RecF/RecN/SMC N terminal domain CLO1313_RS07125 PF05580 SpoIVB peptidase S55 CLO1313_RS07125 PF17820 PDZ domain CLO1313_RS07130 PF08769 Sporulation initiation factor Spo0A C terminal CLO1313_RS07130 PF00072 Response regulator receiver domain CLO1313_RS07135 PF00072 Response regulator receiver domain CLO1313_RS07140 PF01584 CheW-like domain CLO1313_RS07140 PF02895 Signal transducing histidine kinase, homodimeric domain CLO1313_RS07140 PF07194 P2 response regulator binding domain CLO1313_RS07140 PF01627 Hpt domain CLO1313_RS07140 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CLO1313_RS07145 PF01584 CheW-like domain CLO1313_RS07150 PF01739 CheR methyltransferase, SAM binding domain CLO1313_RS07150 PF03705 CheR methyltransferase, all-alpha domain CLO1313_RS07155 PF01339 CheB methylesterase CLO1313_RS07155 PF00072 Response regulator receiver domain CLO1313_RS07160 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CLO1313_RS07160 PF00072 Response regulator receiver domain CLO1313_RS07160 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) CLO1313_RS07160 PF00672 HAMP domain CLO1313_RS07160 PF01627 Hpt domain CLO1313_RS07160 PF00512 His Kinase A (phospho-acceptor) domain CLO1313_RS07165 PF00072 Response regulator receiver domain CLO1313_RS07165 PF00486 Transcriptional regulatory protein, C terminal CLO1313_RS07175 PF00849 RNA pseudouridylate synthase CLO1313_RS07185 PF00872 Transposase, Mutator family CLO1313_RS07190 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CLO1313_RS07190 PF00512 His Kinase A (phospho-acceptor) domain CLO1313_RS07190 PF16736 Single Cache-like CLO1313_RS07190 PF00989 PAS fold CLO1313_RS07195 PF00486 Transcriptional regulatory protein, C terminal CLO1313_RS07195 PF00072 Response regulator receiver domain CLO1313_RS07200 PF00404 Dockerin type I domain CLO1313_RS07200 PF13472 GDSL-like Lipase/Acylhydrolase family CLO1313_RS07205 PF17996 Carbohydrate esterase 2 N-terminal CLO1313_RS07205 PF00150 Cellulase (glycosyl hydrolase family 5) CLO1313_RS07205 PF00404 Dockerin type I domain CLO1313_RS07205 PF00657 GDSL-like Lipase/Acylhydrolase CLO1313_RS07215 PF00128 Alpha amylase, catalytic domain CLO1313_RS07215 PF02903 Alpha amylase, N-terminal ig-like domain CLO1313_RS07220 PF06838 Methionine gamma-lyase CLO1313_RS07230 PF01168 Alanine racemase, N-terminal domain CLO1313_RS07235 PF04472 Cell division protein SepF CLO1313_RS07240 PF02325 YGGT family CLO1313_RS07245 PF01479 S4 domain CLO1313_RS07245 PF17774 Putative RNA-binding domain in YlmH CLO1313_RS07250 PF05103 DivIVA protein CLO1313_RS07255 PF08264 Anticodon-binding domain of tRNA CLO1313_RS07255 PF00133 tRNA synthetases class I (I, L, M and V) CLO1313_RS07255 PF06827 Zinc finger found in FPG and IleRS CLO1313_RS07260 PF01761 3-dehydroquinate synthase CLO1313_RS07275 PF01938 TRAM domain CLO1313_RS07275 PF00919 Uncharacterized protein family UPF0004 CLO1313_RS07275 PF04055 Radical SAM superfamily CLO1313_RS07285 PF00672 HAMP domain CLO1313_RS07285 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CLO1313_RS07285 PF02743 Cache domain CLO1313_RS07295 PF13419 Haloacid dehalogenase-like hydrolase CLO1313_RS07300 PF00188 Cysteine-rich secretory protein family CLO1313_RS07310 PF05188 MutS domain II CLO1313_RS07310 PF05192 MutS domain III CLO1313_RS07310 PF01624 MutS domain I CLO1313_RS07310 PF00488 MutS domain V CLO1313_RS07310 PF05190 MutS family domain IV CLO1313_RS07315 PF01119 DNA mismatch repair protein, C-terminal domain CLO1313_RS07315 PF08676 MutL C terminal dimerisation domain CLO1313_RS07325 PF17209 Hfq protein CLO1313_RS07330 PF00717 Peptidase S24-like CLO1313_RS07330 PF01726 LexA DNA binding domain CLO1313_RS07340 PF04297 Putative helix-turn-helix protein, YlxM / p13 like CLO1313_RS07345 PF02881 SRP54-type protein, helical bundle domain CLO1313_RS07345 PF00448 SRP54-type protein, GTPase domain CLO1313_RS07345 PF02978 Signal peptide binding domain CLO1313_RS07350 PF00886 Ribosomal protein S16 CLO1313_RS07360 PF01782 RimM N-terminal domain CLO1313_RS07360 PF05239 PRC-barrel domain CLO1313_RS07365 PF01746 tRNA (Guanine-1)-methyltransferase CLO1313_RS07370 PF01245 Ribosomal protein L19 CLO1313_RS07375 PF10502 Signal peptidase, peptidase S26 CLO1313_RS07380 PF01926 50S ribosome-binding GTPase CLO1313_RS07390 PF01351 Ribonuclease HII CLO1313_RS07405 PF02021 Uncharacterised protein family UPF0102 CLO1313_RS07410 PF04002 RadC-like JAB domain CLO1313_RS07415 PF01244 Membrane dipeptidase (Peptidase family M19) CLO1313_RS07420 PF00155 Aminotransferase class I and II CLO1313_RS07445 PF08402 TOBE domain CLO1313_RS07445 PF00005 ABC transporter CLO1313_RS07450 PF00528 Binding-protein-dependent transport system inner membrane component CLO1313_RS07455 PF00528 Binding-protein-dependent transport system inner membrane component CLO1313_RS07460 PF13416 Bacterial extracellular solute-binding protein CLO1313_RS07470 PF00759 Glycosyl hydrolase family 9 CLO1313_RS07470 PF00404 Dockerin type I domain CLO1313_RS07470 PF00942 Cellulose binding domain CLO1313_RS07475 PF01471 Putative peptidoglycan binding domain CLO1313_RS07475 PF03572 Peptidase family S41 CLO1313_RS07475 PF17820 PDZ domain CLO1313_RS07480 PF01554 MatE CLO1313_RS07490 PF10397 Adenylosuccinate lyase C-terminus CLO1313_RS07490 PF00206 Lyase CLO1313_RS07495 PF00392 Bacterial regulatory proteins, gntR family CLO1313_RS07495 PF07702 UTRA domain CLO1313_RS07505 PF00403 Heavy-metal-associated domain CLO1313_RS07510 PF01648 4'-phosphopantetheinyl transferase superfamily CLO1313_RS07515 PF00963 Cohesin domain CLO1313_RS07515 PF00395 S-layer homology domain CLO1313_RS07520 PF00395 S-layer homology domain CLO1313_RS07520 PF00963 Cohesin domain CLO1313_RS07535 PF01264 Chorismate synthase CLO1313_RS07540 PF01202 Shikimate kinase CLO1313_RS07550 PF00404 Dockerin type I domain CLO1313_RS07550 PF01270 Glycosyl hydrolases family 8 CLO1313_RS07555 PF02899 Phage integrase, N-terminal SAM-like domain CLO1313_RS07555 PF00589 Phage integrase family CLO1313_RS07565 PF02127 Aminopeptidase I zinc metalloprotease (M18) CLO1313_RS07570 PF01966 HD domain CLO1313_RS07580 PF00579 tRNA synthetases class I (W and Y) CLO1313_RS07590 PF01592 NifU-like N terminal domain CLO1313_RS07595 PF00266 Aminotransferase class-V CLO1313_RS07600 PF02082 Transcriptional regulator CLO1313_RS07610 PF03705 CheR methyltransferase, all-alpha domain CLO1313_RS07610 PF01739 CheR methyltransferase, SAM binding domain CLO1313_RS07615 PF00334 Nucleoside diphosphate kinase CLO1313_RS07620 PF02675 S-adenosylmethionine decarboxylase CLO1313_RS07630 PF01553 Acyltransferase CLO1313_RS07635 PF02224 Cytidylate kinase CLO1313_RS07660 PF00300 Histidine phosphatase superfamily (branch 1) CLO1313_RS07665 PF01380 SIS domain CLO1313_RS07665 PF01418 Helix-turn-helix domain, rpiR family CLO1313_RS07685 PF00682 HMGL-like CLO1313_RS07685 PF02436 Conserved carboxylase domain CLO1313_RS07685 PF00364 Biotin-requiring enzyme CLO1313_RS07690 PF00364 Biotin-requiring enzyme CLO1313_RS07700 PF01039 Carboxyl transferase domain CLO1313_RS07710 PF06962 Putative rRNA methylase CLO1313_RS07715 PF00491 Arginase family CLO1313_RS07720 PF17284 Spermidine synthase tetramerisation domain CLO1313_RS07725 PF01479 S4 domain CLO1313_RS07725 PF00849 RNA pseudouridylate synthase CLO1313_RS07730 PF09579 Sporulation protein YtfJ (Spore_YtfJ) CLO1313_RS07745 PF04079 Segregation and condensation complex subunit ScpB CLO1313_RS07750 PF02616 Segregation and condensation protein ScpA CLO1313_RS07755 PF00579 tRNA synthetases class I (W and Y) CLO1313_RS07760 PF02163 Peptidase family M50 CLO1313_RS07765 PF12627 Probable RNA and SrmB- binding site of polymerase A CLO1313_RS07765 PF01368 DHH family CLO1313_RS07765 PF01743 Poly A polymerase head domain CLO1313_RS07765 PF02272 DHHA1 domain CLO1313_RS07765 PF00571 CBS domain CLO1313_RS07770 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain CLO1313_RS07770 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain CLO1313_RS07780 PF00478 IMP dehydrogenase / GMP reductase domain CLO1313_RS07780 PF00571 CBS domain CLO1313_RS07790 PF07943 Penicillin-binding protein 5, C-terminal domain CLO1313_RS07790 PF00768 D-alanyl-D-alanine carboxypeptidase CLO1313_RS07795 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain CLO1313_RS07795 PF02885 Glycosyl transferase family, helical bundle domain CLO1313_RS07795 PF00591 Glycosyl transferase family, a/b domain CLO1313_RS07800 PF01676 Metalloenzyme superfamily CLO1313_RS07805 PF00589 Phage integrase family CLO1313_RS07805 PF02899 Phage integrase, N-terminal SAM-like domain CLO1313_RS07810 PF01944 Stage II sporulation protein M CLO1313_RS07815 PF00293 NUDIX domain CLO1313_RS07820 PF00075 RNase H CLO1313_RS07825 PF14748 Pyrroline-5-carboxylate reductase dimerisation CLO1313_RS07825 PF03807 NADP oxidoreductase coenzyme F420-dependent CLO1313_RS07855 PF03323 Bacillus/Clostridium GerA spore germination protein CLO1313_RS07860 PF01145 SPFH domain / Band 7 family CLO1313_RS07865 PF01145 SPFH domain / Band 7 family CLO1313_RS07870 PF07501 G5 domain CLO1313_RS07870 PF03990 G5-linked-Ubiquitin-like domain CLO1313_RS07870 PF06725 3D domain CLO1313_RS07890 PF00404 Dockerin type I domain CLO1313_RS07890 PF00722 Glycosyl hydrolases family 16 CLO1313_RS07895 PF00404 Dockerin type I domain CLO1313_RS07920 PF00266 Aminotransferase class-V CLO1313_RS07925 PF04055 Radical SAM superfamily CLO1313_RS07925 PF06968 Biotin and Thiamin Synthesis associated domain CLO1313_RS07935 PF01361 Tautomerase enzyme CLO1313_RS07965 PF00749 tRNA synthetases class I (E and Q), catalytic domain CLO1313_RS07980 PF00809 Pterin binding enzyme CLO1313_RS07980 PF02607 B12 binding domain CLO1313_RS07980 PF02310 B12 binding domain CLO1313_RS07980 PF02574 Homocysteine S-methyltransferase CLO1313_RS07980 PF02965 Vitamin B12 dependent methionine synthase, activation domain CLO1313_RS08010 PF00722 Glycosyl hydrolases family 16 CLO1313_RS08010 PF00404 Dockerin type I domain CLO1313_RS08015 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) CLO1313_RS08015 PF00128 Alpha amylase, catalytic domain CLO1313_RS08015 PF02806 Alpha amylase, C-terminal all-beta domain CLO1313_RS08020 PF12538 DNA transporter CLO1313_RS08020 PF01580 FtsK/SpoIIIE family CLO1313_RS08040 PF00069 Protein kinase domain CLO1313_RS08040 PF03793 PASTA domain CLO1313_RS08070 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain CLO1313_RS08070 PF00437 Type II/IV secretion system protein CLO1313_RS08090 PF00942 Cellulose binding domain CLO1313_RS08090 PF00759 Glycosyl hydrolase family 9 CLO1313_RS08090 PF00404 Dockerin type I domain CLO1313_RS08095 PF12891 Glycoside hydrolase family 44 CLO1313_RS08095 PF00942 Cellulose binding domain CLO1313_RS08100 PF01258 Prokaryotic dksA/traR C4-type zinc finger CLO1313_RS08105 PF01048 Phosphorylase superfamily CLO1313_RS08110 PF01008 Initiation factor 2 subunit family CLO1313_RS08115 PF02742 Iron dependent repressor, metal binding and dimerisation domain CLO1313_RS08115 PF01325 Iron dependent repressor, N-terminal DNA binding domain CLO1313_RS08125 PF07670 Nucleoside recognition CLO1313_RS08125 PF02421 Ferrous iron transport protein B CLO1313_RS08125 PF17910 FeoB cytosolic helical domain CLO1313_RS08125 PF07664 Ferrous iron transport protein B C terminus CLO1313_RS08125 PF04023 FeoA domain CLO1313_RS08130 PF12002 MgsA AAA+ ATPase C terminal CLO1313_RS08130 PF16193 AAA C-terminal domain CLO1313_RS08130 PF00004 ATPase family associated with various cellular activities (AAA) CLO1313_RS08140 PF00501 AMP-binding enzyme CLO1313_RS08140 PF14535 AMP-binding enzyme C-terminal domain CLO1313_RS08150 PF12798 4Fe-4S binding domain CLO1313_RS08150 PF00037 4Fe-4S binding domain CLO1313_RS08155 PF00474 Sodium:solute symporter family CLO1313_RS08160 PF10996 Beta-Casp domain CLO1313_RS08160 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain CLO1313_RS08160 PF00753 Metallo-beta-lactamase superfamily CLO1313_RS08165 PF00155 Aminotransferase class I and II CLO1313_RS08170 PF05343 M42 glutamyl aminopeptidase CLO1313_RS08175 PF05343 M42 glutamyl aminopeptidase CLO1313_RS08180 PF05343 M42 glutamyl aminopeptidase CLO1313_RS08190 PF00877 NlpC/P60 family CLO1313_RS08205 PF01964 Radical SAM ThiC family CLO1313_RS08210 PF02581 Thiamine monophosphate synthase CLO1313_RS08215 PF00899 ThiF family CLO1313_RS08215 PF00581 Rhodanese-like domain CLO1313_RS08220 PF04055 Radical SAM superfamily CLO1313_RS08220 PF06968 Biotin and Thiamin Synthesis associated domain CLO1313_RS08225 PF05690 Thiazole biosynthesis protein ThiG CLO1313_RS08230 PF02597 ThiS family CLO1313_RS08230 PF05690 Thiazole biosynthesis protein ThiG CLO1313_RS08235 PF01926 50S ribosome-binding GTPase CLO1313_RS08255 PF13649 Methyltransferase domain CLO1313_RS08290 PF13408 Recombinase zinc beta ribbon domain CLO1313_RS08290 PF00239 Resolvase, N terminal domain CLO1313_RS08290 PF07508 Recombinase CLO1313_RS08300 PF08494 DEAD/H associated CLO1313_RS08300 PF00270 DEAD/DEAH box helicase CLO1313_RS08300 PF00271 Helicase conserved C-terminal domain CLO1313_RS08320 PF02796 Helix-turn-helix domain of resolvase CLO1313_RS08320 PF00239 Resolvase, N terminal domain CLO1313_RS08355 PF00158 Sigma-54 interaction domain CLO1313_RS08355 PF00072 Response regulator receiver domain CLO1313_RS08360 PF08448 PAS fold CLO1313_RS08360 PF08447 PAS fold CLO1313_RS08360 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CLO1313_RS08365 PF05670 NFACT protein RNA binding domain CLO1313_RS08370 PF00155 Aminotransferase class I and II CLO1313_RS08375 PF00881 Nitroreductase family CLO1313_RS08380 PF00759 Glycosyl hydrolase family 9 CLO1313_RS08380 PF03442 Carbohydrate binding domain X2 CLO1313_RS08380 PF00942 Cellulose binding domain CLO1313_RS08390 PF00834 Ribulose-phosphate 3 epimerase family CLO1313_RS08395 PF03193 RsgA GTPase CLO1313_RS08395 PF16745 RsgA N-terminal domain CLO1313_RS08400 PF03793 PASTA domain CLO1313_RS08400 PF00069 Protein kinase domain CLO1313_RS08410 PF04055 Radical SAM superfamily CLO1313_RS08415 PF01029 NusB family CLO1313_RS08415 PF01189 16S rRNA methyltransferase RsmB/F CLO1313_RS08420 PF04298 Putative neutral zinc metallopeptidase CLO1313_RS08430 PF00551 Formyl transferase CLO1313_RS08430 PF02911 Formyl transferase, C-terminal domain CLO1313_RS08435 PF01327 Polypeptide deformylase CLO1313_RS08440 PF04851 Type III restriction enzyme, res subunit CLO1313_RS08440 PF17764 3′ DNA-binding domain (3′BD) CLO1313_RS08440 PF18074 Primosomal protein N C-terminal domain CLO1313_RS08440 PF00271 Helicase conserved C-terminal domain CLO1313_RS08440 PF18319 PriA DNA helicase Cys-rich region (CRR) domain CLO1313_RS08450 PF00348 Polyprenyl synthetase CLO1313_RS08465 PF02424 ApbE family CLO1313_RS08470 PF07992 Pyridine nucleotide-disulphide oxidoreductase CLO1313_RS08485 PF01522 Polysaccharide deacetylase CLO1313_RS08490 PF00733 Asparagine synthase CLO1313_RS08490 PF13537 Glutamine amidotransferase domain CLO1313_RS08495 PF05698 Bacterial trigger factor protein (TF) C-terminus CLO1313_RS08500 PF00586 AIR synthase related protein, N-terminal domain CLO1313_RS08500 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain CLO1313_RS08500 PF02769 AIR synthase related protein, C-terminal domain CLO1313_RS08505 PF03466 LysR substrate binding domain CLO1313_RS08505 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CLO1313_RS08515 PF00501 AMP-binding enzyme CLO1313_RS08515 PF13193 AMP-binding enzyme C-terminal domain CLO1313_RS08525 PF00183 Hsp90 protein CLO1313_RS08530 PF00950 ABC 3 transport family CLO1313_RS08535 PF00005 ABC transporter CLO1313_RS08540 PF01297 Zinc-uptake complex component A periplasmic CLO1313_RS08545 PF01475 Ferric uptake regulator family CLO1313_RS08560 PF00404 Dockerin type I domain CLO1313_RS08560 PF00942 Cellulose binding domain CLO1313_RS08560 PF00759 Glycosyl hydrolase family 9 CLO1313_RS08570 PF01321 Creatinase/Prolidase N-terminal domain CLO1313_RS08570 PF00557 Metallopeptidase family M24 CLO1313_RS08575 PF12704 MacB-like periplasmic core domain CLO1313_RS08575 PF00005 ABC transporter CLO1313_RS08580 PF00005 ABC transporter CLO1313_RS08585 PF00512 His Kinase A (phospho-acceptor) domain CLO1313_RS08585 PF00672 HAMP domain CLO1313_RS08585 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CLO1313_RS08590 PF00486 Transcriptional regulatory protein, C terminal CLO1313_RS08590 PF00072 Response regulator receiver domain CLO1313_RS08595 PF00150 Cellulase (glycosyl hydrolase family 5) CLO1313_RS08595 PF00404 Dockerin type I domain CLO1313_RS08605 PF00664 ABC transporter transmembrane region CLO1313_RS08605 PF00005 ABC transporter CLO1313_RS08605 PF03412 Peptidase C39 family CLO1313_RS08640 PF01797 Transposase IS200 like CLO1313_RS08655 PF00512 His Kinase A (phospho-acceptor) domain CLO1313_RS08655 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CLO1313_RS08655 PF16736 Single Cache-like CLO1313_RS08655 PF00989 PAS fold CLO1313_RS08660 PF03977 Na+-transporting oxaloacetate decarboxylase beta subunit CLO1313_RS08675 PF02811 PHP domain CLO1313_RS08675 PF00929 Exonuclease CLO1313_RS08675 PF07733 Bacterial DNA polymerase III alpha NTPase domain CLO1313_RS08675 PF14579 Helix-hairpin-helix motif CLO1313_RS08675 PF17657 Bacterial DNA polymerase III alpha subunit finger domain CLO1313_RS08680 PF04055 Radical SAM superfamily CLO1313_RS08685 PF01228 Glycine radical CLO1313_RS08685 PF02901 Pyruvate formate lyase-like CLO1313_RS08690 PF09587 Bacterial capsule synthesis protein PGA_cap CLO1313_RS08725 PF04542 Sigma-70 region 2 CLO1313_RS08725 PF04539 Sigma-70 region 3 CLO1313_RS08725 PF04545 Sigma-70, region 4 CLO1313_RS08735 PF03975 CheD chemotactic sensory transduction CLO1313_RS08740 PF04509 CheC-like family CLO1313_RS08745 PF01584 CheW-like domain CLO1313_RS08750 PF02895 Signal transducing histidine kinase, homodimeric domain CLO1313_RS08750 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CLO1313_RS08750 PF01627 Hpt domain CLO1313_RS08750 PF07194 P2 response regulator binding domain CLO1313_RS08750 PF01584 CheW-like domain CLO1313_RS08755 PF01339 CheB methylesterase CLO1313_RS08755 PF00072 Response regulator receiver domain CLO1313_RS08765 PF10609 NUBPL iron-transfer P-loop NTPase CLO1313_RS08770 PF00448 SRP54-type protein, GTPase domain CLO1313_RS08775 PF00771 FHIPEP family CLO1313_RS08780 PF01312 FlhB HrpN YscU SpaS Family CLO1313_RS08785 PF01311 Bacterial export proteins, family 1 CLO1313_RS08790 PF01313 Bacterial export proteins, family 3 CLO1313_RS08795 PF00813 FliP family CLO1313_RS08805 PF00072 Response regulator receiver domain CLO1313_RS08810 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term CLO1313_RS08810 PF04509 CheC-like family CLO1313_RS08815 PF02154 Flagellar motor switch protein FliM CLO1313_RS08815 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term CLO1313_RS08825 PF06289 Flagellar and Swarming motility proteins CLO1313_RS08830 PF06429 Flagellar basal body rod FlgEFG protein C-terminal CLO1313_RS08830 PF07559 Flagellar basal body protein FlaE CLO1313_RS08830 PF00460 Flagella basal body rod protein CLO1313_RS08840 PF03963 Flagellar hook capping protein - N-terminal region CLO1313_RS08860 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain CLO1313_RS08860 PF02874 ATP synthase alpha/beta family, beta-barrel domain CLO1313_RS08860 PF18269 T3SS EscN ATPase C-terminal domain CLO1313_RS08865 PF02108 Flagellar assembly protein FliH CLO1313_RS08870 PF01706 FliG C-terminal domain CLO1313_RS08870 PF14842 FliG N-terminal domain CLO1313_RS08870 PF14841 FliG middle domain CLO1313_RS08880 PF02049 Flagellar hook-basal body complex protein FliE CLO1313_RS08885 PF06429 Flagellar basal body rod FlgEFG protein C-terminal CLO1313_RS08885 PF00460 Flagella basal body rod protein CLO1313_RS08890 PF00460 Flagella basal body rod protein CLO1313_RS08895 PF01134 Glucose inhibited division protein A CLO1313_RS08900 PF01751 Toprim domain CLO1313_RS08900 PF01396 Topoisomerase DNA binding C4 zinc finger CLO1313_RS08900 PF01131 DNA topoisomerase CLO1313_RS08905 PF02481 DNA recombination-mediator protein A CLO1313_RS08905 PF17782 DprA winged helix domain CLO1313_RS08910 PF03372 Endonuclease/Exonuclease/phosphatase family CLO1313_RS08915 PF03733 Inner membrane component domain CLO1313_RS08925 PF13335 Magnesium chelatase, subunit ChlI C-terminal CLO1313_RS08925 PF01078 Magnesium chelatase, subunit ChlI CLO1313_RS08940 PF00404 Dockerin type I domain CLO1313_RS08940 PF00963 Cohesin domain CLO1313_RS08940 PF00942 Cellulose binding domain CLO1313_RS08950 PF03477 ATP cone domain CLO1313_RS08955 PF05239 PRC-barrel domain CLO1313_RS08960 PF04542 Sigma-70 region 2 CLO1313_RS08960 PF04545 Sigma-70, region 4 CLO1313_RS08960 PF04539 Sigma-70 region 3 CLO1313_RS08965 PF04545 Sigma-70, region 4 CLO1313_RS08965 PF04542 Sigma-70 region 2 CLO1313_RS08975 PF00091 Tubulin/FtsZ family, GTPase domain CLO1313_RS08975 PF12327 FtsZ family, C-terminal domain CLO1313_RS08980 PF02491 SHS2 domain inserted in FTSA CLO1313_RS08985 PF06947 Protein of unknown function (DUF1290) CLO1313_RS08990 PF08478 POTRA domain, FtsQ-type CLO1313_RS08990 PF03799 Cell division protein FtsQ CLO1313_RS08995 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) CLO1313_RS09000 PF08353 Domain of unknown function (DUF1727) CLO1313_RS09000 PF08245 Mur ligase middle domain CLO1313_RS09005 PF07685 CobB/CobQ-like glutamine amidotransferase domain CLO1313_RS09015 PF00872 Transposase, Mutator family CLO1313_RS09020 PF00404 Dockerin type I domain CLO1313_RS09045 PF00759 Glycosyl hydrolase family 9 CLO1313_RS09045 PF00942 Cellulose binding domain CLO1313_RS09060 PF02906 Iron only hydrogenase large subunit, C-terminal domain CLO1313_RS09060 PF00037 4Fe-4S binding domain CLO1313_RS09060 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region CLO1313_RS09060 PF02256 Iron hydrogenase small subunit CLO1313_RS09065 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region CLO1313_RS09065 PF00037 4Fe-4S binding domain CLO1313_RS09065 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit CLO1313_RS09095 PF00465 Iron-containing alcohol dehydrogenase CLO1313_RS09095 PF00171 Aldehyde dehydrogenase family CLO1313_RS09100 PF02629 CoA binding domain CLO1313_RS09100 PF06971 Putative DNA-binding protein N-terminus CLO1313_RS09105 PF02441 Flavoprotein CLO1313_RS09115 PF05193 Peptidase M16 inactive domain CLO1313_RS09115 PF00675 Insulinase (Peptidase family M16) CLO1313_RS09120 PF00575 S1 RNA binding domain CLO1313_RS09120 PF03725 3' exoribonuclease family, domain 2 CLO1313_RS09120 PF01138 3' exoribonuclease family, domain 1 CLO1313_RS09120 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain CLO1313_RS09120 PF00013 KH domain CLO1313_RS09125 PF00312 Ribosomal protein S15 CLO1313_RS09135 PF12652 CotJB protein CLO1313_RS09140 PF05067 Manganese containing catalase CLO1313_RS09145 PF02927 Cellulase N-terminal ig-like domain CLO1313_RS09145 PF00759 Glycosyl hydrolase family 9 CLO1313_RS09145 PF00404 Dockerin type I domain CLO1313_RS09145 PF02018 Carbohydrate binding domain CLO1313_RS09145 PF02018 Carbohydrate binding domain CLO1313_RS09145 PF02927 Cellulase N-terminal ig-like domain CLO1313_RS09145 PF00404 Dockerin type I domain CLO1313_RS09145 PF00759 Glycosyl hydrolase family 9 CLO1313_RS09150 PF02927 Cellulase N-terminal ig-like domain CLO1313_RS09150 PF00404 Dockerin type I domain CLO1313_RS09150 PF00759 Glycosyl hydrolase family 9 CLO1313_RS09150 PF02018 Carbohydrate binding domain CLO1313_RS09160 PF05167 Uncharacterised ACR (DUF711) CLO1313_RS09170 PF00563 EAL domain CLO1313_RS09170 PF03707 Bacterial signalling protein N terminal repeat CLO1313_RS09170 PF00990 Diguanylate cyclase, GGDEF domain CLO1313_RS09185 PF00331 Glycosyl hydrolase family 10 CLO1313_RS09185 PF00942 Cellulose binding domain CLO1313_RS09185 PF00150 Cellulase (glycosyl hydrolase family 5) CLO1313_RS09190 PF00942 Cellulose binding domain CLO1313_RS09190 PF12791 Anti-sigma factor N-terminus CLO1313_RS09195 PF04542 Sigma-70 region 2 CLO1313_RS09220 PF01906 Putative heavy-metal-binding CLO1313_RS09225 PF00005 ABC transporter CLO1313_RS09225 PF00664 ABC transporter transmembrane region CLO1313_RS09230 PF00664 ABC transporter transmembrane region CLO1313_RS09230 PF00005 ABC transporter CLO1313_RS09235 PF05025 RbsD / FucU transport protein family CLO1313_RS09240 PF00465 Iron-containing alcohol dehydrogenase CLO1313_RS09245 PF13407 Periplasmic binding protein domain CLO1313_RS09250 PF02653 Branched-chain amino acid transport system / permease component CLO1313_RS09255 PF00005 ABC transporter CLO1313_RS09260 PF01325 Iron dependent repressor, N-terminal DNA binding domain CLO1313_RS09260 PF00480 ROK family CLO1313_RS09265 PF00294 pfkB family carbohydrate kinase CLO1313_RS09270 PF08240 Alcohol dehydrogenase GroES-like domain CLO1313_RS09270 PF00107 Zinc-binding dehydrogenase CLO1313_RS09280 PF02687 FtsX-like permease family CLO1313_RS09280 PF12704 MacB-like periplasmic core domain CLO1313_RS09280 PF00005 ABC transporter CLO1313_RS09330 PF02540 NAD synthase CLO1313_RS09330 PF00117 Glutamine amidotransferase class-I CLO1313_RS09330 PF00958 GMP synthase C terminal domain CLO1313_RS09335 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain CLO1313_RS09335 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase CLO1313_RS09340 PF10418 Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B CLO1313_RS09340 PF00175 Oxidoreductase NAD-binding domain CLO1313_RS09345 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster CLO1313_RS09345 PF07992 Pyridine nucleotide-disulphide oxidoreductase CLO1313_RS09345 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region CLO1313_RS09350 PF00872 Transposase, Mutator family CLO1313_RS09360 PF01969 Protein of unknown function DUF111 CLO1313_RS09365 PF00731 AIR carboxylase CLO1313_RS09370 PF03807 NADP oxidoreductase coenzyme F420-dependent CLO1313_RS09370 PF14748 Pyrroline-5-carboxylate reductase dimerisation CLO1313_RS09380 PF03462 PCRF domain CLO1313_RS09380 PF00472 RF-1 domain CLO1313_RS09385 PF01381 Helix-turn-helix CLO1313_RS09395 PF00155 Aminotransferase class I and II CLO1313_RS09400 PF01037 Lrp/AsnC ligand binding domain CLO1313_RS09410 PF00085 Thioredoxin CLO1313_RS09420 PF00872 Transposase, Mutator family CLO1313_RS09440 PF00343 Carbohydrate phosphorylase CLO1313_RS09440 PF11897 Protein of unknown function (DUF3417) CLO1313_RS09455 PF01869 BadF/BadG/BcrA/BcrD ATPase family CLO1313_RS09475 PF10502 Signal peptidase, peptidase S26 CLO1313_RS09480 PF01116 Fructose-bisphosphate aldolase class-II CLO1313_RS09485 PF00365 Phosphofructokinase CLO1313_RS09495 PF00056 lactate/malate dehydrogenase, NAD binding domain CLO1313_RS09495 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain CLO1313_RS09500 PF03949 Malic enzyme, NAD binding domain CLO1313_RS09500 PF00390 Malic enzyme, N-terminal domain CLO1313_RS09505 PF01613 Flavin reductase like domain CLO1313_RS09510 PF02906 Iron only hydrogenase large subunit, C-terminal domain CLO1313_RS09510 PF00037 4Fe-4S binding domain CLO1313_RS09510 PF02256 Iron hydrogenase small subunit CLO1313_RS09510 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region CLO1313_RS09515 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit CLO1313_RS09515 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region CLO1313_RS09515 PF00037 4Fe-4S binding domain CLO1313_RS09525 PF00512 His Kinase A (phospho-acceptor) domain CLO1313_RS09525 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CLO1313_RS09525 PF09308 LuxQ, periplasmic CLO1313_RS09525 PF00072 Response regulator receiver domain CLO1313_RS09545 PF04060 Putative Fe-S cluster CLO1313_RS09550 PF13581 Histidine kinase-like ATPase domain CLO1313_RS09560 PF03129 Anticodon binding domain CLO1313_RS09560 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) CLO1313_RS09560 PF02824 TGS domain CLO1313_RS09560 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain CLO1313_RS09570 PF08241 Methyltransferase domain CLO1313_RS09585 PF16658 Class II release factor RF3, C-terminal domain CLO1313_RS09585 PF03144 Elongation factor Tu domain 2 CLO1313_RS09585 PF00009 Elongation factor Tu GTP binding domain CLO1313_RS09590 PF00963 Cohesin domain CLO1313_RS09590 PF00395 S-layer homology domain CLO1313_RS09595 PF01797 Transposase IS200 like CLO1313_RS09620 PF00795 Carbon-nitrogen hydrolase CLO1313_RS09620 PF02540 NAD synthase CLO1313_RS09625 PF08264 Anticodon-binding domain of tRNA CLO1313_RS09625 PF00133 tRNA synthetases class I (I, L, M and V) CLO1313_RS09625 PF10458 Valyl tRNA synthetase tRNA binding arm CLO1313_RS09635 PF01915 Glycosyl hydrolase family 3 C-terminal domain CLO1313_RS09635 PF00933 Glycosyl hydrolase family 3 N terminal domain CLO1313_RS09650 PF00596 Class II Aldolase and Adducin N-terminal domain CLO1313_RS09655 PF03734 L,D-transpeptidase catalytic domain CLO1313_RS09655 PF17964 Bacterial Ig domain CLO1313_RS09665 PF07691 PA14 domain CLO1313_RS09665 PF12791 Anti-sigma factor N-terminus CLO1313_RS09670 PF04542 Sigma-70 region 2 CLO1313_RS09685 PF17871 AAA lid domain CLO1313_RS09685 PF07724 AAA domain (Cdc48 subfamily) CLO1313_RS09685 PF00004 ATPase family associated with various cellular activities (AAA) CLO1313_RS09685 PF10431 C-terminal, D2-small domain, of ClpB protein CLO1313_RS09685 PF02861 Clp amino terminal domain, pathogenicity island component CLO1313_RS09695 PF17760 UvrA interaction domain CLO1313_RS09695 PF17755 UvrA DNA-binding domain CLO1313_RS09700 PF07501 G5 domain CLO1313_RS09700 PF06725 3D domain CLO1313_RS09700 PF03990 G5-linked-Ubiquitin-like domain CLO1313_RS09705 PF00271 Helicase conserved C-terminal domain CLO1313_RS09705 PF04851 Type III restriction enzyme, res subunit CLO1313_RS09705 PF02151 UvrB/uvrC motif CLO1313_RS09705 PF12344 Ultra-violet resistance protein B CLO1313_RS09705 PF17757 UvrB interaction domain CLO1313_RS09720 PF03989 DNA gyrase C-terminal domain, beta-propeller CLO1313_RS09720 PF00521 DNA gyrase/topoisomerase IV, subunit A CLO1313_RS09725 PF00986 DNA gyrase B subunit, carboxyl terminus CLO1313_RS09725 PF01751 Toprim domain CLO1313_RS09725 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CLO1313_RS09725 PF00204 DNA gyrase B CLO1313_RS09740 PF12821 Threonine/Serine exporter, ThrE CLO1313_RS09745 PF06738 Putative threonine/serine exporter CLO1313_RS09750 PF00188 Cysteine-rich secretory protein family CLO1313_RS09755 PF01554 MatE CLO1313_RS09760 PF00672 HAMP domain CLO1313_RS09760 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CLO1313_RS09760 PF02203 Tar ligand binding domain homologue CLO1313_RS09770 PF00266 Aminotransferase class-V CLO1313_RS09810 PF03190 Protein of unknown function, DUF255 CLO1313_RS09815 PF00742 Homoserine dehydrogenase CLO1313_RS09815 PF01842 ACT domain CLO1313_RS09815 PF03447 Homoserine dehydrogenase, NAD binding domain CLO1313_RS09820 PF13307 Helicase C-terminal domain CLO1313_RS09820 PF04851 Type III restriction enzyme, res subunit CLO1313_RS09825 PF01739 CheR methyltransferase, SAM binding domain CLO1313_RS09825 PF03705 CheR methyltransferase, all-alpha domain CLO1313_RS09830 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CLO1313_RS09830 PF00512 His Kinase A (phospho-acceptor) domain CLO1313_RS09830 PF09308 LuxQ, periplasmic CLO1313_RS09830 PF00072 Response regulator receiver domain CLO1313_RS09835 PF00512 His Kinase A (phospho-acceptor) domain CLO1313_RS09835 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CLO1313_RS09840 PF00180 Isocitrate/isopropylmalate dehydrogenase CLO1313_RS09850 PF00248 Aldo/keto reductase family CLO1313_RS09855 PF00534 Glycosyl transferases group 1 CLO1313_RS09855 PF08323 Starch synthase catalytic domain CLO1313_RS09870 PF00849 RNA pseudouridylate synthase CLO1313_RS09870 PF01479 S4 domain CLO1313_RS09875 PF02926 THUMP domain CLO1313_RS09875 PF10672 S-adenosylmethionine-dependent methyltransferase CLO1313_RS09875 PF01170 Putative RNA methylase family UPF0020 CLO1313_RS09880 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain CLO1313_RS09880 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain CLO1313_RS09885 PF06165 Glycosyltransferase family 36 CLO1313_RS09885 PF17167 Glycosyl hydrolase 36 superfamily, catalytic domain CLO1313_RS09890 PF00759 Glycosyl hydrolase family 9 CLO1313_RS09890 PF00942 Cellulose binding domain CLO1313_RS09895 PF01966 HD domain CLO1313_RS09900 PF07943 Penicillin-binding protein 5, C-terminal domain CLO1313_RS09900 PF00768 D-alanyl-D-alanine carboxypeptidase CLO1313_RS09905 PF00759 Glycosyl hydrolase family 9 CLO1313_RS09905 PF00942 Cellulose binding domain CLO1313_RS09910 PF00704 Glycosyl hydrolases family 18 CLO1313_RS09910 PF00041 Fibronectin type III domain CLO1313_RS09915 PF00404 Dockerin type I domain CLO1313_RS09915 PF01270 Glycosyl hydrolases family 8 CLO1313_RS09925 PF12791 Anti-sigma factor N-terminus CLO1313_RS09925 PF00942 Cellulose binding domain CLO1313_RS09930 PF17200 Single Cache domain 2 CLO1313_RS09930 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CLO1313_RS09930 PF00672 HAMP domain CLO1313_RS09935 PF00266 Aminotransferase class-V CLO1313_RS09950 PF00171 Aldehyde dehydrogenase family CLO1313_RS09960 PF12791 Anti-sigma factor N-terminus CLO1313_RS09970 PF00404 Dockerin type I domain CLO1313_RS09975 PF00437 Type II/IV secretion system protein CLO1313_RS09980 PF00356 Bacterial regulatory proteins, lacI family CLO1313_RS09995 PF17863 AAA lid domain CLO1313_RS09995 PF07726 ATPase family associated with various cellular activities (AAA) CLO1313_RS10010 PF01139 tRNA-splicing ligase RtcB CLO1313_RS10015 PF03415 Clostripain family CLO1313_RS10025 PF00488 MutS domain V CLO1313_RS10025 PF05188 MutS domain II CLO1313_RS10025 PF05192 MutS domain III CLO1313_RS10025 PF05190 MutS family domain IV CLO1313_RS10025 PF01624 MutS domain I CLO1313_RS10030 PF18370 Rhamnogalacturonan I lyases beta-sheet domain CLO1313_RS10035 PF01022 Bacterial regulatory protein, arsR family CLO1313_RS10040 PF00403 Heavy-metal-associated domain CLO1313_RS10045 PF07486 Cell Wall Hydrolase CLO1313_RS10045 PF01471 Putative peptidoglycan binding domain CLO1313_RS10065 PF00404 Dockerin type I domain CLO1313_RS10065 PF01270 Glycosyl hydrolases family 8 CLO1313_RS10080 PF00248 Aldo/keto reductase family CLO1313_RS10085 PF00462 Glutaredoxin CLO1313_RS10090 PF13193 AMP-binding enzyme C-terminal domain CLO1313_RS10090 PF00501 AMP-binding enzyme CLO1313_RS10095 PF13302 Acetyltransferase (GNAT) domain CLO1313_RS10105 PF04055 Radical SAM superfamily CLO1313_RS10105 PF06463 Molybdenum Cofactor Synthesis C CLO1313_RS10115 PF01370 NAD dependent epimerase/dehydratase family CLO1313_RS10145 PF13361 UvrD-like helicase C-terminal domain CLO1313_RS10145 PF00580 UvrD/REP helicase N-terminal domain CLO1313_RS10150 PF02463 RecF/RecN/SMC N terminal domain CLO1313_RS10155 PF03747 ADP-ribosylglycohydrolase CLO1313_RS10165 PF00872 Transposase, Mutator family CLO1313_RS10195 PF00149 Calcineurin-like phosphoesterase CLO1313_RS10200 PF00342 Phosphoglucose isomerase CLO1313_RS10210 PF03483 B3/4 domain CLO1313_RS10210 PF03147 Ferredoxin-fold anticodon binding domain CLO1313_RS10210 PF01588 Putative tRNA binding domain CLO1313_RS10210 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain CLO1313_RS10210 PF03484 tRNA synthetase B5 domain CLO1313_RS10215 PF01409 tRNA synthetases class II core domain (F) CLO1313_RS10215 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain CLO1313_RS10225 PF00232 Glycosyl hydrolase family 1 CLO1313_RS10235 PF00404 Dockerin type I domain CLO1313_RS10235 PF00722 Glycosyl hydrolases family 16 CLO1313_RS10240 PF00356 Bacterial regulatory proteins, lacI family CLO1313_RS10245 PF00535 Glycosyl transferase family 2 CLO1313_RS10255 PF10141 Single-strand DNA-specific exonuclease, C terminal domain CLO1313_RS10255 PF17768 RecJ OB domain CLO1313_RS10255 PF02272 DHHA1 domain CLO1313_RS10255 PF01368 DHH family CLO1313_RS10265 PF13361 UvrD-like helicase C-terminal domain CLO1313_RS10265 PF00580 UvrD/REP helicase N-terminal domain CLO1313_RS10285 PF00120 Glutamine synthetase, catalytic domain CLO1313_RS10285 PF03951 Glutamine synthetase, beta-Grasp domain CLO1313_RS10295 PF01077 Nitrite and sulphite reductase 4Fe-4S domain CLO1313_RS10295 PF04324 BFD-like [2Fe-2S] binding domain CLO1313_RS10295 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain CLO1313_RS10295 PF07992 Pyridine nucleotide-disulphide oxidoreductase CLO1313_RS10295 PF18267 Rubredoxin NAD+ reductase C-terminal domain CLO1313_RS10300 PF13247 4Fe-4S dicluster domain CLO1313_RS10300 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster CLO1313_RS10300 PF07992 Pyridine nucleotide-disulphide oxidoreductase CLO1313_RS10305 PF01645 Conserved region in glutamate synthase CLO1313_RS10305 PF13187 4Fe-4S dicluster domain CLO1313_RS10310 PF00310 Glutamine amidotransferases class-II CLO1313_RS10315 PF12437 Glutamine synthetase type III N terminal CLO1313_RS10315 PF00120 Glutamine synthetase, catalytic domain CLO1313_RS10315 PF18318 Glutamine synthetase C-terminal domain CLO1313_RS10330 PF00999 Sodium/hydrogen exchanger family CLO1313_RS10345 PF00722 Glycosyl hydrolases family 16 CLO1313_RS10345 PF00404 Dockerin type I domain CLO1313_RS10350 PF00404 Dockerin type I domain CLO1313_RS10350 PF01270 Glycosyl hydrolases family 8 CLO1313_RS10355 PF01725 Ham1 family CLO1313_RS10360 PF03725 3' exoribonuclease family, domain 2 CLO1313_RS10360 PF01138 3' exoribonuclease family, domain 1 CLO1313_RS10365 PF10646 Sporulation and spore germination CLO1313_RS10370 PF16363 GDP-mannose 4,6 dehydratase CLO1313_RS10375 PF01520 N-acetylmuramoyl-L-alanine amidase CLO1313_RS10385 PF02677 Epoxyqueuosine reductase QueH CLO1313_RS10390 PF05491 RuvB C-terminal winged helix domain CLO1313_RS10390 PF05496 Holliday junction DNA helicase RuvB P-loop domain CLO1313_RS10390 PF17864 RuvB AAA lid domain CLO1313_RS10395 PF01330 RuvA N terminal domain CLO1313_RS10395 PF07499 RuvA, C-terminal domain CLO1313_RS10400 PF02075 Crossover junction endodeoxyribonuclease RuvC CLO1313_RS10405 PF00764 Arginosuccinate synthase CLO1313_RS10410 PF00206 Lyase CLO1313_RS10410 PF14698 Argininosuccinate lyase C-terminal CLO1313_RS10430 PF00884 Sulfatase CLO1313_RS10435 PF01593 Flavin containing amine oxidoreductase CLO1313_RS10465 PF01339 CheB methylesterase CLO1313_RS10465 PF00072 Response regulator receiver domain CLO1313_RS10470 PF08331 Domain of unknown function (DUF1730) CLO1313_RS10480 PF01985 CRS1 / YhbY (CRM) domain CLO1313_RS10490 PF01926 50S ribosome-binding GTPase CLO1313_RS10490 PF01018 GTP1/OBG CLO1313_RS10490 PF09269 Domain of unknown function (DUF1967) CLO1313_RS10495 PF01016 Ribosomal L27 protein CLO1313_RS10505 PF00829 Ribosomal prokaryotic L21 protein CLO1313_RS10510 PF10150 Ribonuclease E/G family CLO1313_RS10510 PF00575 S1 RNA binding domain CLO1313_RS10525 PF17479 Protein of unknown function (DUF3048) C-terminal domain CLO1313_RS10525 PF11258 Protein of unknown function (DUF3048) N-terminal domain CLO1313_RS10530 PF06949 Protein of unknown function (DUF1292) CLO1313_RS10535 PF03652 Holliday junction resolvase CLO1313_RS10540 PF00248 Aldo/keto reductase family CLO1313_RS10545 PF06135 IreB regulatory phosphoprotein CLO1313_RS10550 PF04055 Radical SAM superfamily CLO1313_RS10550 PF00919 Uncharacterized protein family UPF0004 CLO1313_RS10550 PF01938 TRAM domain CLO1313_RS10565 PF00773 RNB domain CLO1313_RS10565 PF00575 S1 RNA binding domain CLO1313_RS10565 PF17876 Cold shock domain CLO1313_RS10565 PF08206 Ribonuclease B OB domain CLO1313_RS10570 PF01797 Transposase IS200 like CLO1313_RS10585 PF03952 Enolase, N-terminal domain CLO1313_RS10585 PF00113 Enolase, C-terminal TIM barrel domain CLO1313_RS10590 PF01966 HD domain CLO1313_RS10600 PF01676 Metalloenzyme superfamily CLO1313_RS10600 PF06415 BPG-independent PGAM N-terminus (iPGM_N) CLO1313_RS10605 PF00121 Triosephosphate isomerase CLO1313_RS10610 PF00162 Phosphoglycerate kinase CLO1313_RS10615 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain CLO1313_RS10615 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain CLO1313_RS10625 PF00109 Beta-ketoacyl synthase, N-terminal domain CLO1313_RS10625 PF00698 Acyl transferase domain CLO1313_RS10625 PF00668 Condensation domain CLO1313_RS10625 PF16197 Ketoacyl-synthetase C-terminal extension CLO1313_RS10625 PF00550 Phosphopantetheine attachment site CLO1313_RS10625 PF02801 Beta-ketoacyl synthase, C-terminal domain CLO1313_RS10635 PF13193 AMP-binding enzyme C-terminal domain CLO1313_RS10635 PF00501 AMP-binding enzyme CLO1313_RS10640 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal CLO1313_RS10640 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III CLO1313_RS10645 PF00550 Phosphopantetheine attachment site CLO1313_RS10650 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal CLO1313_RS10650 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III CLO1313_RS10655 PF00072 Response regulator receiver domain CLO1313_RS10655 PF01966 HD domain CLO1313_RS10660 PF00588 SpoU rRNA Methylase family CLO1313_RS10670 PF14097 Stage V sporulation protein AE1 CLO1313_RS10675 PF03862 SpoVAC/SpoVAEB sporulation membrane protein CLO1313_RS10685 PF03862 SpoVAC/SpoVAEB sporulation membrane protein CLO1313_RS10695 PF04539 Sigma-70 region 3 CLO1313_RS10695 PF04542 Sigma-70 region 2 CLO1313_RS10695 PF04545 Sigma-70, region 4 CLO1313_RS10700 PF13581 Histidine kinase-like ATPase domain CLO1313_RS10705 PF01740 STAS domain CLO1313_RS10710 PF00381 PTS HPr component phosphorylation site CLO1313_RS10715 PF10298 WhiA N-terminal LAGLIDADG-like domain CLO1313_RS10715 PF02650 WhiA C-terminal HTH domain CLO1313_RS10715 PF14527 WhiA LAGLIDADG-like domain CLO1313_RS10725 PF01933 Uncharacterised protein family UPF0052 CLO1313_RS10730 PF03668 P-loop ATPase protein family CLO1313_RS10735 PF01565 FAD binding domain CLO1313_RS10735 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain CLO1313_RS10740 PF02811 PHP domain CLO1313_RS10745 PF07475 HPr Serine kinase C-terminal domain CLO1313_RS10745 PF02603 HPr Serine kinase N terminus CLO1313_RS10770 PF00885 6,7-dimethyl-8-ribityllumazine synthase CLO1313_RS10775 PF00925 GTP cyclohydrolase II CLO1313_RS10775 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase CLO1313_RS10780 PF00677 Lumazine binding domain CLO1313_RS10785 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region CLO1313_RS10785 PF01872 RibD C-terminal domain CLO1313_RS10790 PF01894 Uncharacterised protein family UPF0047 CLO1313_RS10795 PF02390 Putative methyltransferase CLO1313_RS10800 PF00465 Iron-containing alcohol dehydrogenase CLO1313_RS10810 PF02219 Methylenetetrahydrofolate reductase CLO1313_RS10815 PF00571 CBS domain CLO1313_RS10815 PF02163 Peptidase family M50 CLO1313_RS10820 PF01551 Peptidase family M23 CLO1313_RS10825 PF03698 Uncharacterised protein family (UPF0180) CLO1313_RS10830 PF02142 MGS-like domain CLO1313_RS10835 PF03776 Septum formation topological specificity factor MinE CLO1313_RS10840 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain CLO1313_RS10845 PF03775 Septum formation inhibitor MinC, C-terminal domain CLO1313_RS10850 PF03717 Penicillin-binding Protein dimerisation domain CLO1313_RS10850 PF00905 Penicillin binding protein transpeptidase domain CLO1313_RS10870 PF02545 Maf-like protein CLO1313_RS10880 PF05389 Negative regulator of genetic competence (MecA) CLO1313_RS10895 PF02190 ATP-dependent protease La (LON) substrate-binding domain CLO1313_RS10895 PF05362 Lon protease (S16) C-terminal proteolytic domain CLO1313_RS10895 PF00004 ATPase family associated with various cellular activities (AAA) CLO1313_RS10900 PF01960 ArgJ family CLO1313_RS10905 PF01584 CheW-like domain CLO1313_RS10950 PF03442 Carbohydrate binding domain X2 CLO1313_RS10950 PF00942 Cellulose binding domain CLO1313_RS10950 PF02011 Glycosyl hydrolase family 48 CLO1313_RS10955 PF00152 tRNA synthetases class II (D, K and N) CLO1313_RS10955 PF01336 OB-fold nucleic acid binding domain CLO1313_RS10960 PF03590 Aspartate-ammonia ligase CLO1313_RS10965 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD CLO1313_RS10970 PF02146 Sir2 family CLO1313_RS10985 PF02690 Na+/Pi-cotransporter CLO1313_RS10995 PF00884 Sulfatase CLO1313_RS11000 PF02632 BioY family CLO1313_RS11005 PF07516 SecA Wing and Scaffold domain CLO1313_RS11005 PF01043 SecA preprotein cross-linking domain CLO1313_RS11005 PF07517 SecA DEAD-like domain CLO1313_RS11005 PF02810 SEC-C motif CLO1313_RS11010 PF00942 Cellulose binding domain CLO1313_RS11010 PF12791 Anti-sigma factor N-terminus CLO1313_RS11025 PF02368 Bacterial Ig-like domain (group 2) CLO1313_RS11035 PF02638 Glycosyl hydrolase-like 10 CLO1313_RS11040 PF00317 Ribonucleotide reductase, all-alpha domain CLO1313_RS11040 PF02867 Ribonucleotide reductase, barrel domain CLO1313_RS11040 PF03477 ATP cone domain CLO1313_RS11085 PF00756 Putative esterase CLO1313_RS11085 PF00331 Glycosyl hydrolase family 10 CLO1313_RS11085 PF00404 Dockerin type I domain CLO1313_RS11085 PF03422 Carbohydrate binding module (family 6) CLO1313_RS11090 PF00759 Glycosyl hydrolase family 9 CLO1313_RS11090 PF00942 Cellulose binding domain CLO1313_RS11095 PF01926 50S ribosome-binding GTPase CLO1313_RS11095 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal CLO1313_RS11105 PF00759 Glycosyl hydrolase family 9 CLO1313_RS11105 PF00942 Cellulose binding domain CLO1313_RS11110 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CLO1313_RS11110 PF12729 Four helix bundle sensory module for signal transduction CLO1313_RS11110 PF00672 HAMP domain CLO1313_RS11115 PF01584 CheW-like domain CLO1313_RS11120 PF12729 Four helix bundle sensory module for signal transduction CLO1313_RS11120 PF00672 HAMP domain CLO1313_RS11120 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CLO1313_RS11125 PF01584 CheW-like domain CLO1313_RS11130 PF00011 Hsp20/alpha crystallin family CLO1313_RS11135 PF03063 Prismane/CO dehydrogenase family CLO1313_RS11140 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region CLO1313_RS11140 PF02256 Iron hydrogenase small subunit CLO1313_RS11140 PF02906 Iron only hydrogenase large subunit, C-terminal domain CLO1313_RS11140 PF00037 4Fe-4S binding domain CLO1313_RS11150 PF00009 Elongation factor Tu GTP binding domain CLO1313_RS11150 PF03764 Elongation factor G, domain IV CLO1313_RS11150 PF14492 Elongation Factor G, domain II CLO1313_RS11150 PF00679 Elongation factor G C-terminus CLO1313_RS11155 PF02156 Glycosyl hydrolase family 26 CLO1313_RS11175 PF04715 Anthranilate synthase component I, N terminal region CLO1313_RS11175 PF00425 chorismate binding enzyme CLO1313_RS11180 PF04715 Anthranilate synthase component I, N terminal region CLO1313_RS11180 PF00425 chorismate binding enzyme CLO1313_RS11185 PF04715 Anthranilate synthase component I, N terminal region CLO1313_RS11185 PF00425 chorismate binding enzyme CLO1313_RS11190 PF04715 Anthranilate synthase component I, N terminal region CLO1313_RS11190 PF00425 chorismate binding enzyme CLO1313_RS11195 PF00202 Aminotransferase class-III CLO1313_RS11200 PF13847 Methyltransferase domain CLO1313_RS11205 PF12697 Alpha/beta hydrolase family CLO1313_RS11210 PF00155 Aminotransferase class I and II CLO1313_RS11220 PF06968 Biotin and Thiamin Synthesis associated domain CLO1313_RS11220 PF04055 Radical SAM superfamily CLO1313_RS11235 PF07556 Protein of unknown function (DUF1538) CLO1313_RS11245 PF04616 Glycosyl hydrolases family 43 CLO1313_RS11245 PF16369 C-terminal lipocalin-like domain CLO1313_RS11300 PF00872 Transposase, Mutator family CLO1313_RS11320 PF00578 AhpC/TSA family CLO1313_RS11340 PF08281 Sigma-70, region 4 CLO1313_RS11340 PF04542 Sigma-70 region 2 CLO1313_RS11350 PF02156 Glycosyl hydrolase family 26 CLO1313_RS11350 PF03425 Carbohydrate binding domain (family 11) CLO1313_RS11350 PF00404 Dockerin type I domain CLO1313_RS11350 PF00150 Cellulase (glycosyl hydrolase family 5) CLO1313_RS11355 PF03358 NADPH-dependent FMN reductase CLO1313_RS11370 PF02142 MGS-like domain CLO1313_RS11370 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain CLO1313_RS11370 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain CLO1313_RS11380 PF00692 dUTPase CLO1313_RS11385 PF00440 Bacterial regulatory proteins, tetR family CLO1313_RS11395 PF03176 MMPL family CLO1313_RS11420 PF00753 Metallo-beta-lactamase superfamily CLO1313_RS11420 PF01613 Flavin reductase like domain CLO1313_RS11425 PF00293 NUDIX domain CLO1313_RS11435 PF02743 Cache domain CLO1313_RS11435 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CLO1313_RS11435 PF00672 HAMP domain CLO1313_RS11460 PF03551 Transcriptional regulator PadR-like family CLO1313_RS11460 PF10400 Virulence activator alpha C-term CLO1313_RS11465 PF00892 EamA-like transporter family CLO1313_RS11480 PF12729 Four helix bundle sensory module for signal transduction CLO1313_RS11480 PF00672 HAMP domain CLO1313_RS11480 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CLO1313_RS11485 PF00909 Ammonium Transporter Family CLO1313_RS11490 PF00005 ABC transporter CLO1313_RS11490 PF00664 ABC transporter transmembrane region CLO1313_RS11495 PF00005 ABC transporter CLO1313_RS11495 PF00664 ABC transporter transmembrane region CLO1313_RS11515 PF00963 Cohesin domain CLO1313_RS11515 PF00395 S-layer homology domain CLO1313_RS11530 PF03960 ArsC family CLO1313_RS11545 PF01555 DNA methylase CLO1313_RS11550 PF04556 DpnII restriction endonuclease CLO1313_RS11555 PF02086 D12 class N6 adenine-specific DNA methyltransferase CLO1313_RS11570 PF03193 RsgA GTPase CLO1313_RS11590 PF10672 S-adenosylmethionine-dependent methyltransferase CLO1313_RS11590 PF17785 PUA-like domain CLO1313_RS11635 PF02687 FtsX-like permease family CLO1313_RS11640 PF00005 ABC transporter CLO1313_RS11645 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CLO1313_RS11650 PF00072 Response regulator receiver domain CLO1313_RS11650 PF00486 Transcriptional regulatory protein, C terminal CLO1313_RS11685 PF00005 ABC transporter CLO1313_RS11685 PF13732 Domain of unknown function (DUF4162) CLO1313_RS11695 PF01381 Helix-turn-helix CLO1313_RS11700 PF12437 Glutamine synthetase type III N terminal CLO1313_RS11700 PF18318 Glutamine synthetase C-terminal domain CLO1313_RS11700 PF00120 Glutamine synthetase, catalytic domain CLO1313_RS11705 PF02934 GatB/GatE catalytic domain CLO1313_RS11705 PF02637 GatB domain CLO1313_RS11710 PF01425 Amidase CLO1313_RS11715 PF02686 Glu-tRNAGln amidotransferase C subunit CLO1313_RS11720 PF01336 OB-fold nucleic acid binding domain CLO1313_RS11720 PF02938 GAD domain CLO1313_RS11720 PF00152 tRNA synthetases class II (D, K and N) CLO1313_RS11745 PF00378 Enoyl-CoA hydratase/isomerase CLO1313_RS11750 PF13649 Methyltransferase domain CLO1313_RS11755 PF00190 Cupin CLO1313_RS11760 PF00190 Cupin CLO1313_RS11775 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain CLO1313_RS11775 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain CLO1313_RS11780 PF03180 NLPA lipoprotein CLO1313_RS11785 PF00528 Binding-protein-dependent transport system inner membrane component CLO1313_RS11790 PF09383 NIL domain CLO1313_RS11790 PF00005 ABC transporter CLO1313_RS11795 PF02082 Transcriptional regulator CLO1313_RS11800 PF01053 Cys/Met metabolism PLP-dependent enzyme CLO1313_RS11805 PF00291 Pyridoxal-phosphate dependent enzyme CLO1313_RS11820 PF00005 ABC transporter CLO1313_RS11830 PF00148 Nitrogenase component 1 type Oxidoreductase CLO1313_RS11835 PF00148 Nitrogenase component 1 type Oxidoreductase CLO1313_RS11840 PF04055 Radical SAM superfamily CLO1313_RS11840 PF02579 Dinitrogenase iron-molybdenum cofactor CLO1313_RS11845 PF02579 Dinitrogenase iron-molybdenum cofactor CLO1313_RS11845 PF04055 Radical SAM superfamily CLO1313_RS11850 PF01053 Cys/Met metabolism PLP-dependent enzyme CLO1313_RS11860 PF00528 Binding-protein-dependent transport system inner membrane component CLO1313_RS11865 PF00005 ABC transporter CLO1313_RS11870 PF00142 4Fe-4S iron sulfur cluster binding proteins, NifH/frxC family CLO1313_RS11880 PF01048 Phosphorylase superfamily CLO1313_RS11885 PF02608 ABC transporter substrate-binding protein PnrA-like CLO1313_RS11890 PF11230 Protein of unknown function (DUF3029) CLO1313_RS11895 PF04055 Radical SAM superfamily CLO1313_RS11900 PF00005 ABC transporter CLO1313_RS11905 PF02653 Branched-chain amino acid transport system / permease component CLO1313_RS11910 PF02653 Branched-chain amino acid transport system / permease component CLO1313_RS11915 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region CLO1313_RS11920 PF01791 DeoC/LacD family aldolase CLO1313_RS11925 PF12833 Helix-turn-helix domain CLO1313_RS11925 PF00072 Response regulator receiver domain CLO1313_RS11930 PF06580 Histidine kinase CLO1313_RS11935 PF00528 Binding-protein-dependent transport system inner membrane component CLO1313_RS11940 PF08402 TOBE domain CLO1313_RS11940 PF00005 ABC transporter CLO1313_RS11965 PF02595 Glycerate kinase family CLO1313_RS11990 PF00176 SNF2 family N-terminal domain CLO1313_RS11990 PF00271 Helicase conserved C-terminal domain CLO1313_RS12030 PF00293 NUDIX domain CLO1313_RS12035 PF13936 Helix-turn-helix domain CLO1313_RS12040 PF13408 Recombinase zinc beta ribbon domain CLO1313_RS12040 PF07508 Recombinase CLO1313_RS12050 PF00239 Resolvase, N terminal domain CLO1313_RS12050 PF02796 Helix-turn-helix domain of resolvase CLO1313_RS12060 PF01476 LysM domain CLO1313_RS12060 PF01471 Putative peptidoglycan binding domain CLO1313_RS12060 PF01510 N-acetylmuramoyl-L-alanine amidase CLO1313_RS12065 PF05105 Bacteriophage holin family CLO1313_RS12140 PF00574 Clp protease CLO1313_RS12145 PF04860 Phage portal protein CLO1313_RS12150 PF03354 Phage Terminase CLO1313_RS12185 PF01555 DNA methylase CLO1313_RS12190 PF01555 DNA methylase CLO1313_RS12225 PF00005 ABC transporter CLO1313_RS12235 PF02702 Osmosensitive K+ channel His kinase sensor domain CLO1313_RS12235 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CLO1313_RS12235 PF13493 Domain of unknown function (DUF4118) CLO1313_RS12235 PF00512 His Kinase A (phospho-acceptor) domain CLO1313_RS12240 PF00072 Response regulator receiver domain CLO1313_RS12240 PF00486 Transcriptional regulatory protein, C terminal CLO1313_RS12245 PF00753 Metallo-beta-lactamase superfamily CLO1313_RS12245 PF16123 Hydroxyacylglutathione hydrolase C-terminus CLO1313_RS12280 PF01938 TRAM domain CLO1313_RS12280 PF05958 tRNA (Uracil-5-)-methyltransferase CLO1313_RS12285 PF00005 ABC transporter CLO1313_RS12290 PF01032 FecCD transport family CLO1313_RS12295 PF01497 Periplasmic binding protein CLO1313_RS12305 PF01476 LysM domain CLO1313_RS12305 PF08525 Opacity-associated protein A N-terminal motif CLO1313_RS12305 PF01551 Peptidase family M23 CLO1313_RS12320 PF00912 Transglycosylase CLO1313_RS12320 PF00905 Penicillin binding protein transpeptidase domain CLO1313_RS12325 PF02687 FtsX-like permease family CLO1313_RS12325 PF12704 MacB-like periplasmic core domain CLO1313_RS12335 PF00005 ABC transporter CLO1313_RS12350 PF00696 Amino acid kinase family CLO1313_RS12375 PF02915 Rubrerythrin CLO1313_RS12385 PF02698 DUF218 domain CLO1313_RS12390 PF05362 Lon protease (S16) C-terminal proteolytic domain CLO1313_RS12390 PF13654 AAA domain CLO1313_RS12395 PF00583 Acetyltransferase (GNAT) family CLO1313_RS12400 PF00814 Glycoprotease family CLO1313_RS12405 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE CLO1313_RS12410 PF01979 Amidohydrolase family CLO1313_RS12435 PF00380 Ribosomal protein S9/S16 CLO1313_RS12440 PF00572 Ribosomal protein L13 CLO1313_RS12450 PF10635 DisA bacterial checkpoint controller linker region CLO1313_RS12450 PF02457 DisA bacterial checkpoint controller nucleotide-binding CLO1313_RS12455 PF18073 Rubredoxin metal binding domain CLO1313_RS12470 PF10431 C-terminal, D2-small domain, of ClpB protein CLO1313_RS12470 PF02861 Clp amino terminal domain, pathogenicity island component CLO1313_RS12470 PF07724 AAA domain (Cdc48 subfamily) CLO1313_RS12470 PF17871 AAA lid domain CLO1313_RS12470 PF00004 ATPase family associated with various cellular activities (AAA) CLO1313_RS12475 PF00217 ATP:guanido phosphotransferase, C-terminal catalytic domain CLO1313_RS12480 PF02151 UvrB/uvrC motif CLO1313_RS12485 PF05848 CtsR N-terminal HTH domain CLO1313_RS12485 PF17727 CtsR C-terminal dimerization domain CLO1313_RS12500 PF03144 Elongation factor Tu domain 2 CLO1313_RS12500 PF00679 Elongation factor G C-terminus CLO1313_RS12500 PF14492 Elongation Factor G, domain II CLO1313_RS12500 PF03764 Elongation factor G, domain IV CLO1313_RS12500 PF00009 Elongation factor Tu GTP binding domain CLO1313_RS12505 PF00793 DAHP synthetase I family CLO1313_RS12505 PF18152 DAHP synthase ferredoxin-like domain CLO1313_RS12510 PF02153 Prephenate dehydrogenase CLO1313_RS12510 PF01842 ACT domain CLO1313_RS12515 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) CLO1313_RS12520 PF06971 Putative DNA-binding protein N-terminus CLO1313_RS12520 PF02629 CoA binding domain CLO1313_RS12525 PF12848 ABC transporter CLO1313_RS12525 PF00005 ABC transporter CLO1313_RS12525 PF16326 ABC transporter C-terminal domain CLO1313_RS12530 PF01476 LysM domain CLO1313_RS12530 PF00704 Glycosyl hydrolases family 18 CLO1313_RS12535 PF00005 ABC transporter CLO1313_RS12540 PF02361 Cobalt transport protein CLO1313_RS12545 PF01891 Cobalt uptake substrate-specific transmembrane region CLO1313_RS12545 PF13190 PDGLE domain CLO1313_RS12550 PF01520 N-acetylmuramoyl-L-alanine amidase CLO1313_RS12555 PF00072 Response regulator receiver domain CLO1313_RS12555 PF00486 Transcriptional regulatory protein, C terminal CLO1313_RS12560 PF00963 Cohesin domain CLO1313_RS12560 PF00942 Cellulose binding domain CLO1313_RS12560 PF00404 Dockerin type I domain CLO1313_RS12580 PF08281 Sigma-70, region 4 CLO1313_RS12580 PF04542 Sigma-70 region 2 CLO1313_RS12585 PF00905 Penicillin binding protein transpeptidase domain CLO1313_RS12585 PF05569 BlaR1 peptidase M56 CLO1313_RS12590 PF03965 Penicillinase repressor CLO1313_RS12595 PF01774 UreD urease accessory protein CLO1313_RS12600 PF02492 CobW/HypB/UreG, nucleotide-binding domain CLO1313_RS12605 PF01730 UreF CLO1313_RS12610 PF05194 UreE urease accessory protein, C-terminal domain CLO1313_RS12610 PF02814 UreE urease accessory protein, N-terminal domain CLO1313_RS12615 PF01979 Amidohydrolase family CLO1313_RS12615 PF00449 Urease alpha-subunit, N-terminal domain CLO1313_RS12620 PF00699 Urease beta subunit CLO1313_RS12625 PF00547 Urease, gamma subunit CLO1313_RS12630 PF00005 ABC transporter CLO1313_RS12635 PF12399 Branched-chain amino acid ATP-binding cassette transporter CLO1313_RS12635 PF00005 ABC transporter CLO1313_RS12645 PF02653 Branched-chain amino acid transport system / permease component CLO1313_RS12655 PF12833 Helix-turn-helix domain CLO1313_RS12655 PF00072 Response regulator receiver domain CLO1313_RS12660 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) CLO1313_RS12660 PF00072 Response regulator receiver domain CLO1313_RS12660 PF00672 HAMP domain CLO1313_RS12660 PF01627 Hpt domain CLO1313_RS12660 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CLO1313_RS12660 PF00512 His Kinase A (phospho-acceptor) domain CLO1313_RS12665 PF00360 Phytochrome region CLO1313_RS12665 PF08446 PAS fold CLO1313_RS12665 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CLO1313_RS12665 PF00512 His Kinase A (phospho-acceptor) domain CLO1313_RS12665 PF01590 GAF domain CLO1313_RS12705 PF00872 Transposase, Mutator family CLO1313_RS12825 PF00756 Putative esterase CLO1313_RS12825 PF02018 Carbohydrate binding domain CLO1313_RS12825 PF00331 Glycosyl hydrolase family 10 CLO1313_RS12825 PF00404 Dockerin type I domain CLO1313_RS12825 PF00756 Putative esterase CLO1313_RS12825 PF00404 Dockerin type I domain CLO1313_RS12825 PF02018 Carbohydrate binding domain CLO1313_RS12825 PF00331 Glycosyl hydrolase family 10 CLO1313_RS12830 PF06968 Biotin and Thiamin Synthesis associated domain CLO1313_RS12830 PF04055 Radical SAM superfamily CLO1313_RS12835 PF00291 Pyridoxal-phosphate dependent enzyme CLO1313_RS12840 PF02540 NAD synthase CLO1313_RS12845 PF01053 Cys/Met metabolism PLP-dependent enzyme CLO1313_RS12850 PF02082 Transcriptional regulator CLO1313_RS12855 PF02082 Transcriptional regulator CLO1313_RS12860 PF04204 Homoserine O-succinyltransferase CLO1313_RS12865 PF00989 PAS fold CLO1313_RS12865 PF00512 His Kinase A (phospho-acceptor) domain CLO1313_RS12865 PF18698 Histidine kinase sensor domain CLO1313_RS12865 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CLO1313_RS12865 PF00672 HAMP domain CLO1313_RS12870 PF00072 Response regulator receiver domain CLO1313_RS12870 PF00486 Transcriptional regulatory protein, C terminal CLO1313_RS12875 PF00403 Heavy-metal-associated domain CLO1313_RS12920 PF01430 Hsp33 protein CLO1313_RS12925 PF00313 'Cold-shock' DNA-binding domain CLO1313_RS12930 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain CLO1313_RS12945 PF03572 Peptidase family S41 CLO1313_RS12945 PF17820 PDZ domain CLO1313_RS12945 PF01471 Putative peptidoglycan binding domain CLO1313_RS12950 PF01476 LysM domain CLO1313_RS12950 PF01551 Peptidase family M23 CLO1313_RS12955 PF18075 FtsX extracellular domain CLO1313_RS12955 PF02687 FtsX-like permease family CLO1313_RS12960 PF00005 ABC transporter CLO1313_RS12965 PF17853 GGDEF-like domain CLO1313_RS12965 PF13556 PucR C-terminal helix-turn-helix domain CLO1313_RS12965 PF05651 Putative sugar diacid recognition CLO1313_RS12970 PF17912 MalK OB fold domain CLO1313_RS12970 PF00005 ABC transporter CLO1313_RS12970 PF03459 TOBE domain CLO1313_RS12975 PF02774 Semialdehyde dehydrogenase, dimerisation domain CLO1313_RS12975 PF01118 Semialdehyde dehydrogenase, NAD binding domain CLO1313_RS12980 PF00696 Amino acid kinase family CLO1313_RS12990 PF00202 Aminotransferase class-III CLO1313_RS12995 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain CLO1313_RS12995 PF00117 Glutamine amidotransferase class-I CLO1313_RS13000 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain CLO1313_RS13000 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain CLO1313_RS13000 PF02142 MGS-like domain CLO1313_RS13005 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain CLO1313_RS13005 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain CLO1313_RS13020 PF00150 Cellulase (glycosyl hydrolase family 5) CLO1313_RS13020 PF00404 Dockerin type I domain CLO1313_RS13040 PF03551 Transcriptional regulator PadR-like family CLO1313_RS13045 PF00149 Calcineurin-like phosphoesterase CLO1313_RS13060 PF02557 D-alanyl-D-alanine carboxypeptidase CLO1313_RS13065 PF13936 Helix-turn-helix domain CLO1313_RS13070 PF00872 Transposase, Mutator family CLO1313_RS13080 PF11738 Protein of unknown function (DUF3298) CLO1313_RS13080 PF01522 Polysaccharide deacetylase CLO1313_RS13080 PF13739 Deacetylase PdaC CLO1313_RS13085 PF00501 AMP-binding enzyme CLO1313_RS13085 PF00550 Phosphopantetheine attachment site CLO1313_RS13085 PF00668 Condensation domain CLO1313_RS13085 PF13193 AMP-binding enzyme C-terminal domain CLO1313_RS13100 PF00668 Condensation domain CLO1313_RS13100 PF14765 Polyketide synthase dehydratase CLO1313_RS13100 PF00550 Phosphopantetheine attachment site CLO1313_RS13100 PF08659 KR domain CLO1313_RS13100 PF02801 Beta-ketoacyl synthase, C-terminal domain CLO1313_RS13100 PF00109 Beta-ketoacyl synthase, N-terminal domain CLO1313_RS13100 PF16197 Ketoacyl-synthetase C-terminal extension CLO1313_RS13100 PF13193 AMP-binding enzyme C-terminal domain CLO1313_RS13100 PF00501 AMP-binding enzyme CLO1313_RS13125 PF01797 Transposase IS200 like CLO1313_RS13145 PF00989 PAS fold CLO1313_RS13145 PF00512 His Kinase A (phospho-acceptor) domain CLO1313_RS13145 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CLO1313_RS13145 PF16736 Single Cache-like CLO1313_RS13150 PF00486 Transcriptional regulatory protein, C terminal CLO1313_RS13150 PF00072 Response regulator receiver domain CLO1313_RS13155 PF00689 Cation transporting ATPase, C-terminus CLO1313_RS13155 PF00690 Cation transporter/ATPase, N-terminus CLO1313_RS13160 PF01276 Orn/Lys/Arg decarboxylase, major domain CLO1313_RS13160 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain CLO1313_RS13165 PF02308 MgtC family CLO1313_RS13170 PF09551 Stage II sporulation protein R (spore_II_R) CLO1313_RS13175 PF03551 Transcriptional regulator PadR-like family CLO1313_RS13185 PF00117 Glutamine amidotransferase class-I CLO1313_RS13185 PF06418 CTP synthase N-terminus CLO1313_RS13190 PF00872 Transposase, Mutator family CLO1313_RS13195 PF00872 Transposase, Mutator family CLO1313_RS13210 PF17820 PDZ domain CLO1313_RS13210 PF01471 Putative peptidoglycan binding domain CLO1313_RS13210 PF03572 Peptidase family S41 CLO1313_RS13215 PF03424 Carbohydrate binding domain (family 17/28) CLO1313_RS13215 PF00150 Cellulase (glycosyl hydrolase family 5) CLO1313_RS13215 PF00395 S-layer homology domain CLO1313_RS13235 PF00750 tRNA synthetases class I (R) CLO1313_RS13235 PF05746 DALR anticodon binding domain CLO1313_RS13235 PF03485 Arginyl tRNA synthetase N terminal domain CLO1313_RS13245 PF01177 Asp/Glu/Hydantoin racemase CLO1313_RS13250 PF07478 D-ala D-ala ligase C-terminus CLO1313_RS13250 PF01820 D-ala D-ala ligase N-terminus CLO1313_RS13255 PF01769 Divalent cation transporter CLO1313_RS13255 PF03448 MgtE intracellular N domain CLO1313_RS13255 PF00571 CBS domain CLO1313_RS13275 PF01791 DeoC/LacD family aldolase CLO1313_RS13280 PF04308 Ribonuclease H-like CLO1313_RS13285 PF07992 Pyridine nucleotide-disulphide oxidoreductase CLO1313_RS13290 PF07992 Pyridine nucleotide-disulphide oxidoreductase CLO1313_RS13295 PF00578 AhpC/TSA family CLO1313_RS13300 PF02683 Cytochrome C biogenesis protein transmembrane region CLO1313_RS13325 PF07486 Cell Wall Hydrolase CLO1313_RS13325 PF01471 Putative peptidoglycan binding domain CLO1313_RS13335 PF00575 S1 RNA binding domain CLO1313_RS13335 PF16921 Tex protein YqgF-like domain CLO1313_RS13335 PF17674 HHH domain CLO1313_RS13335 PF09371 Tex-like protein N-terminal domain CLO1313_RS13340 PF00294 pfkB family carbohydrate kinase CLO1313_RS13355 PF03851 UV-endonuclease UvdE CLO1313_RS13360 PF13649 Methyltransferase domain CLO1313_RS13370 PF00483 Nucleotidyl transferase CLO1313_RS13375 PF00849 RNA pseudouridylate synthase CLO1313_RS13380 PF00404 Dockerin type I domain CLO1313_RS13380 PF00756 Putative esterase CLO1313_RS13380 PF00331 Glycosyl hydrolase family 10 CLO1313_RS13380 PF03422 Carbohydrate binding module (family 6) CLO1313_RS13385 PF13192 Thioredoxin domain CLO1313_RS13385 PF07992 Pyridine nucleotide-disulphide oxidoreductase CLO1313_RS13390 PF10417 C-terminal domain of 1-Cys peroxiredoxin CLO1313_RS13390 PF00578 AhpC/TSA family CLO1313_RS13400 PF00308 Bacterial dnaA protein CLO1313_RS13400 PF11638 DnaA N-terminal domain CLO1313_RS13400 PF08299 Bacterial dnaA protein helix-turn-helix CLO1313_RS13405 PF01580 FtsK/SpoIIIE family CLO1313_RS13405 PF12538 DNA transporter CLO1313_RS13620 PF01797 Transposase IS200 like CLO1313_RS13635 PF00069 Protein kinase domain CLO1313_RS13645 PF08241 Methyltransferase domain CLO1313_RS13660 PF00872 Transposase, Mutator family CLO1313_RS13670 PF00580 UvrD/REP helicase N-terminal domain CLO1313_RS13670 PF12705 PD-(D/E)XK nuclease superfamily CLO1313_RS13670 PF13361 UvrD-like helicase C-terminal domain CLO1313_RS13675 PF12705 PD-(D/E)XK nuclease superfamily CLO1313_RS13750 PF03787 RAMP superfamily CLO1313_RS13785 PF01661 Macro domain CLO1313_RS13805 PF04542 Sigma-70 region 2 CLO1313_RS13805 PF08281 Sigma-70, region 4 CLO1313_RS13810 PF08032 RNA 2'-O ribose methyltransferase substrate binding CLO1313_RS13810 PF00588 SpoU rRNA Methylase family CLO1313_RS13815 PF00636 Ribonuclease III domain CLO1313_RS13820 PF03323 Bacillus/Clostridium GerA spore germination protein CLO1313_RS13830 PF05504 Spore germination B3/ GerAC like, C-terminal CLO1313_RS13835 PF09190 DALR domain CLO1313_RS13835 PF01406 tRNA synthetases class I (C) catalytic domain CLO1313_RS13840 PF00132 Bacterial transferase hexapeptide (six repeats) CLO1313_RS13840 PF06426 Serine acetyltransferase, N-terminal CLO1313_RS13875 PF01546 Peptidase family M20/M25/M40 CLO1313_RS13875 PF07687 Peptidase dimerisation domain CLO1313_RS13880 PF04070 Domain of unknown function (DUF378) CLO1313_RS13885 PF01709 Transcriptional regulator CLO1313_RS13890 PF00512 His Kinase A (phospho-acceptor) domain CLO1313_RS13890 PF00989 PAS fold CLO1313_RS13890 PF18698 Histidine kinase sensor domain CLO1313_RS13890 PF00672 HAMP domain CLO1313_RS13890 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CLO1313_RS13900 PF09186 Domain of unknown function (DUF1949) CLO1313_RS13900 PF01205 Uncharacterized protein family UPF0029 CLO1313_RS13905 PF10502 Signal peptidase, peptidase S26 CLO1313_RS13910 PF00293 NUDIX domain CLO1313_RS13915 PF13167 GTP-binding GTPase N-terminal CLO1313_RS13915 PF01926 50S ribosome-binding GTPase CLO1313_RS13915 PF16360 GTP-binding GTPase Middle Region CLO1313_RS13925 PF00817 impB/mucB/samB family CLO1313_RS13925 PF11799 impB/mucB/samB family C-terminal domain CLO1313_RS13935 PF00692 dUTPase CLO1313_RS13940 PF01136 Peptidase family U32 CLO1313_RS13940 PF16325 Peptidase family U32 C-terminal domain CLO1313_RS13945 PF06415 BPG-independent PGAM N-terminus (iPGM_N) CLO1313_RS13945 PF01676 Metalloenzyme superfamily CLO1313_RS13955 PF00404 Dockerin type I domain CLO1313_RS13955 PF02011 Glycosyl hydrolase family 48 CLO1313_RS13975 PF00398 Ribosomal RNA adenine dimethylase CLO1313_RS13980 PF06725 3D domain CLO1313_RS13980 PF07501 G5 domain CLO1313_RS13980 PF03990 G5-linked-Ubiquitin-like domain CLO1313_RS13990 PF01026 TatD related DNase CLO1313_RS13995 PF09334 tRNA synthetases class I (M) CLO1313_RS13995 PF01588 Putative tRNA binding domain CLO1313_RS13995 PF08264 Anticodon-binding domain of tRNA CLO1313_RS14000 PF10776 Protein of unknown function (DUF2600) CLO1313_RS14005 PF07670 Nucleoside recognition CLO1313_RS14010 PF07670 Nucleoside recognition CLO1313_RS14015 PF18277 AbrB C-terminal domain CLO1313_RS14015 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin CLO1313_RS14020 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases CLO1313_RS14025 PF05175 Methyltransferase small domain CLO1313_RS14030 PF00037 4Fe-4S binding domain CLO1313_RS14035 PF04468 PSP1 C-terminal conserved region CLO1313_RS14040 PF12169 DNA polymerase III subunits gamma and tau domain III CLO1313_RS14045 PF03885 Protein of unknown function (DUF327) CLO1313_RS14055 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain CLO1313_RS14055 PF01276 Orn/Lys/Arg decarboxylase, major domain CLO1313_RS14070 PF00005 ABC transporter CLO1313_RS14080 PF00486 Transcriptional regulatory protein, C terminal CLO1313_RS14080 PF00072 Response regulator receiver domain CLO1313_RS14085 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CLO1313_RS14090 PF01910 Thiamine-binding protein CLO1313_RS14095 PF00528 Binding-protein-dependent transport system inner membrane component CLO1313_RS14100 PF09084 NMT1/THI5 like CLO1313_RS14105 PF00005 ABC transporter CLO1313_RS14110 PF00331 Glycosyl hydrolase family 10 CLO1313_RS14110 PF12791 Anti-sigma factor N-terminus CLO1313_RS14115 PF04542 Sigma-70 region 2 CLO1313_RS14140 PF00528 Binding-protein-dependent transport system inner membrane component CLO1313_RS14145 PF00528 Binding-protein-dependent transport system inner membrane component CLO1313_RS14150 PF07726 ATPase family associated with various cellular activities (AAA) CLO1313_RS14150 PF17863 AAA lid domain CLO1313_RS14190 PF02018 Carbohydrate binding domain CLO1313_RS14190 PF00404 Dockerin type I domain CLO1313_RS14190 PF00331 Glycosyl hydrolase family 10 CLO1313_RS14190 PF00756 Putative esterase CLO1313_RS14195 PF05270 Alpha-L-arabinofuranosidase B (ABFB) domain CLO1313_RS14195 PF04616 Glycosyl hydrolases family 43 CLO1313_RS14200 PF05270 Alpha-L-arabinofuranosidase B (ABFB) domain CLO1313_RS14200 PF04616 Glycosyl hydrolases family 43 CLO1313_RS14215 PF01966 HD domain CLO1313_RS14215 PF13286 Phosphohydrolase-associated domain CLO1313_RS14220 PF13662 Toprim domain CLO1313_RS14220 PF02132 RecR protein CLO1313_RS14225 PF02575 YbaB/EbfC DNA-binding family CLO1313_RS14230 PF12169 DNA polymerase III subunits gamma and tau domain III CLO1313_RS14250 PF00150 Cellulase (glycosyl hydrolase family 5) CLO1313_RS14250 PF00942 Cellulose binding domain CLO1313_RS14250 PF00331 Glycosyl hydrolase family 10 CLO1313_RS14285 PF00395 S-layer homology domain CLO1313_RS14285 PF00963 Cohesin domain CLO1313_RS14300 PF14262 Carbohydrate-binding domain-containing protein Cthe_2159 CLO1313_RS14320 PF07722 Peptidase C26 CLO1313_RS14325 PF01740 STAS domain CLO1313_RS14330 PF00301 Rubredoxin CLO1313_RS14335 PF06866 Protein of unknown function (DUF1256) CLO1313_RS14355 PF00149 Calcineurin-like phosphoesterase CLO1313_RS14370 PF01197 Ribosomal protein L31 CLO1313_RS14375 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain CLO1313_RS14375 PF07497 Rho termination factor, RNA-binding domain CLO1313_RS14375 PF07498 Rho termination factor, N-terminal domain CLO1313_RS14385 PF02517 CPBP intramembrane metalloprotease CLO1313_RS14430 PF00544 Pectate lyase CLO1313_RS14440 PF00654 Voltage gated chloride channel CLO1313_RS14450 PF01171 PP-loop family CLO1313_RS14460 PF00483 Nucleotidyl transferase CLO1313_RS14465 PF03631 Virulence factor BrkB CLO1313_RS14470 PF01084 Ribosomal protein S18 CLO1313_RS14475 PF00436 Single-strand binding protein family CLO1313_RS14480 PF01250 Ribosomal protein S6 CLO1313_RS14485 PF00072 Response regulator receiver domain CLO1313_RS14485 PF00990 Diguanylate cyclase, GGDEF domain CLO1313_RS14490 PF01979 Amidohydrolase family CLO1313_RS14495 PF02806 Alpha amylase, C-terminal all-beta domain CLO1313_RS14495 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) CLO1313_RS14495 PF00128 Alpha amylase, catalytic domain CLO1313_RS14510 PF00404 Dockerin type I domain CLO1313_RS14510 PF00756 Putative esterase CLO1313_RS14510 PF00331 Glycosyl hydrolase family 10 CLO1313_RS14510 PF03422 Carbohydrate binding module (family 6) CLO1313_RS14515 PF04616 Glycosyl hydrolases family 43 CLO1313_RS14515 PF17851 Beta xylosidase C-terminal Concanavalin A-like domain CLO1313_RS14520 PF00404 Dockerin type I domain CLO1313_RS14520 PF00331 Glycosyl hydrolase family 10 CLO1313_RS14520 PF03422 Carbohydrate binding module (family 6) CLO1313_RS14520 PF00756 Putative esterase CLO1313_RS14525 PF00331 Glycosyl hydrolase family 10 CLO1313_RS14525 PF00756 Putative esterase CLO1313_RS14525 PF00404 Dockerin type I domain CLO1313_RS14525 PF03422 Carbohydrate binding module (family 6) CLO1313_RS14530 PF04616 Glycosyl hydrolases family 43 CLO1313_RS14530 PF03422 Carbohydrate binding module (family 6) CLO1313_RS14535 PF00703 Glycosyl hydrolases family 2 CLO1313_RS14535 PF18565 Glycoside hydrolase family 2 C-terminal domain 5 CLO1313_RS14535 PF16355 Domain of unknown function (DUF4982) CLO1313_RS14535 PF02837 Glycosyl hydrolases family 2, sugar binding domain CLO1313_RS14535 PF02836 Glycosyl hydrolases family 2, TIM barrel domain CLO1313_RS14550 PF13411 MerR HTH family regulatory protein CLO1313_RS14550 PF06445 GyrI-like small molecule binding domain CLO1313_RS14555 PF02687 FtsX-like permease family CLO1313_RS14560 PF00005 ABC transporter CLO1313_RS14565 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CLO1313_RS14570 PF00072 Response regulator receiver domain CLO1313_RS14570 PF00486 Transcriptional regulatory protein, C terminal CLO1313_RS14615 PF01227 GTP cyclohydrolase I CLO1313_RS14620 PF08245 Mur ligase middle domain CLO1313_RS14620 PF02875 Mur ligase family, glutamate ligase domain CLO1313_RS14620 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain CLO1313_RS14625 PF03575 Peptidase family S51 CLO1313_RS14635 PF01979 Amidohydrolase family CLO1313_RS14640 PF00717 Peptidase S24-like CLO1313_RS14640 PF01726 LexA DNA binding domain CLO1313_RS14645 PF00180 Isocitrate/isopropylmalate dehydrogenase CLO1313_RS14650 PF00694 Aconitase C-terminal domain CLO1313_RS14655 PF00330 Aconitase family (aconitate hydratase) CLO1313_RS14660 PF12833 Helix-turn-helix domain CLO1313_RS14660 PF02311 AraC-like ligand binding domain CLO1313_RS14665 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) CLO1313_RS14690 PF02561 Flagellar protein FliS CLO1313_RS14695 PF07195 Flagellar hook-associated protein 2 C-terminus CLO1313_RS14695 PF07196 Flagellin hook IN motif CLO1313_RS14695 PF02465 Flagellar hook-associated protein 2 N-terminus CLO1313_RS14705 PF16363 GDP-mannose 4,6 dehydratase CLO1313_RS14710 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family CLO1313_RS14725 PF00551 Formyl transferase CLO1313_RS14725 PF02911 Formyl transferase, C-terminal domain CLO1313_RS14740 PF00550 Phosphopantetheine attachment site CLO1313_RS14750 PF08666 SAF domain CLO1313_RS14750 PF03102 NeuB family CLO1313_RS14755 PF02348 Cytidylyltransferase CLO1313_RS14760 PF08241 Methyltransferase domain CLO1313_RS14765 PF08485 Polysaccharide biosynthesis protein C-terminal CLO1313_RS14765 PF02719 Polysaccharide biosynthesis protein CLO1313_RS14785 PF00669 Bacterial flagellin N-terminal helical region CLO1313_RS14785 PF00700 Bacterial flagellin C-terminal helical region CLO1313_RS14790 PF00700 Bacterial flagellin C-terminal helical region CLO1313_RS14790 PF00669 Bacterial flagellin N-terminal helical region CLO1313_RS14795 PF00171 Aldehyde dehydrogenase family CLO1313_RS14800 PF02599 Global regulator protein family CLO1313_RS14805 PF02623 FliW protein CLO1313_RS14815 PF00669 Bacterial flagellin N-terminal helical region CLO1313_RS14815 PF00700 Bacterial flagellin C-terminal helical region CLO1313_RS14820 PF00460 Flagella basal body rod protein CLO1313_RS14820 PF06429 Flagellar basal body rod FlgEFG protein C-terminal CLO1313_RS14845 PF00156 Phosphoribosyl transferase domain CLO1313_RS14850 PF13538 UvrD-like helicase C-terminal domain CLO1313_RS14850 PF14490 Helix-hairpin-helix containing domain CLO1313_RS14850 PF18335 ATP-dependent RecD-like DNA helicase SH3 domain CLO1313_RS14860 PF00438 S-adenosylmethionine synthetase, N-terminal domain CLO1313_RS14860 PF02772 S-adenosylmethionine synthetase, central domain CLO1313_RS14860 PF02773 S-adenosylmethionine synthetase, C-terminal domain CLO1313_RS14870 PF01434 Peptidase family M41 CLO1313_RS14870 PF06480 FtsH Extracellular CLO1313_RS14870 PF17862 AAA+ lid domain CLO1313_RS14870 PF00004 ATPase family associated with various cellular activities (AAA) CLO1313_RS14875 PF00156 Phosphoribosyl transferase domain CLO1313_RS14880 PF11734 TilS substrate C-terminal domain CLO1313_RS14880 PF01171 PP-loop family CLO1313_RS14885 PF03796 DnaB-like helicase C terminal domain CLO1313_RS14885 PF00772 DnaB-like helicase N terminal domain CLO1313_RS14890 PF01281 Ribosomal protein L9, N-terminal domain CLO1313_RS14890 PF03948 Ribosomal protein L9, C-terminal domain CLO1313_RS14895 PF01368 DHH family CLO1313_RS14895 PF02272 DHHA1 domain CLO1313_RS14905 PF01842 ACT domain CLO1313_RS14905 PF01817 Chorismate mutase type II CLO1313_RS14905 PF00800 Prephenate dehydratase CLO1313_RS14915 PF01496 V-type ATPase 116kDa subunit family CLO1313_RS14920 PF00137 ATP synthase subunit C CLO1313_RS14925 PF01991 ATP synthase (E/31 kDa) subunit CLO1313_RS14935 PF01990 ATP synthase (F/14-kDa) subunit CLO1313_RS14940 PF16886 ATPsynthase alpha/beta subunit N-term extension CLO1313_RS14940 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain CLO1313_RS14940 PF02874 ATP synthase alpha/beta family, beta-barrel domain CLO1313_RS14945 PF02874 ATP synthase alpha/beta family, beta-barrel domain CLO1313_RS14945 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain CLO1313_RS14950 PF01813 ATP synthase subunit D CLO1313_RS14955 PF12848 ABC transporter CLO1313_RS14955 PF00005 ABC transporter CLO1313_RS14990 PF00004 ATPase family associated with various cellular activities (AAA) CLO1313_RS14990 PF01434 Peptidase family M41 CLO1313_RS14990 PF17862 AAA+ lid domain CLO1313_RS15000 PF00497 Bacterial extracellular solute-binding proteins, family 3 CLO1313_RS15005 PF00528 Binding-protein-dependent transport system inner membrane component CLO1313_RS15010 PF00005 ABC transporter CLO1313_RS15015 PF00072 Response regulator receiver domain CLO1313_RS15015 PF01339 CheB methylesterase CLO1313_RS15020 PF01739 CheR methyltransferase, SAM binding domain CLO1313_RS15020 PF03705 CheR methyltransferase, all-alpha domain CLO1313_RS15025 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CLO1313_RS15030 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CLO1313_RS15030 PF02895 Signal transducing histidine kinase, homodimeric domain CLO1313_RS15030 PF01584 CheW-like domain CLO1313_RS15030 PF01627 Hpt domain CLO1313_RS15030 PF07194 P2 response regulator binding domain CLO1313_RS15035 PF01584 CheW-like domain CLO1313_RS15040 PF00589 Phage integrase family CLO1313_RS15045 PF12833 Helix-turn-helix domain CLO1313_RS15045 PF06445 GyrI-like small molecule binding domain CLO1313_RS15060 PF00005 ABC transporter CLO1313_RS15080 PF09827 CRISPR associated protein Cas2 CLO1313_RS15085 PF01867 CRISPR associated protein Cas1 CLO1313_RS15095 PF18395 Cas3 C-terminal domain CLO1313_RS15095 PF18019 HD domain CLO1313_RS15095 PF00270 DEAD/DEAH box helicase CLO1313_RS15125 PF02673 Bacitracin resistance protein BacA CLO1313_RS15130 PF01554 MatE CLO1313_RS15145 PF00795 Carbon-nitrogen hydrolase CLO1313_RS15180 PF02590 Predicted SPOUT methyltransferase CLO1313_RS15185 PF00753 Metallo-beta-lactamase superfamily CLO1313_RS15190 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) CLO1313_RS15210 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CLO1313_RS15210 PF00672 HAMP domain CLO1313_RS15210 PF00512 His Kinase A (phospho-acceptor) domain CLO1313_RS15210 PF13426 PAS domain CLO1313_RS15215 PF00486 Transcriptional regulatory protein, C terminal CLO1313_RS15215 PF00072 Response regulator receiver domain CLO1313_RS15230 PF02719 Polysaccharide biosynthesis protein CLO1313_RS15235 PF14667 Polysaccharide biosynthesis C-terminal domain CLO1313_RS15240 PF13439 Glycosyltransferase Family 4 CLO1313_RS15240 PF00534 Glycosyl transferases group 1 CLO1313_RS15250 PF00534 Glycosyl transferases group 1 CLO1313_RS15260 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain CLO1313_RS15260 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain CLO1313_RS15260 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain CLO1313_RS15280 PF02397 Bacterial sugar transferase CLO1313_RS15285 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family CLO1313_RS15300 PF00963 Cohesin domain CLO1313_RS15300 PF00395 S-layer homology domain CLO1313_RS15305 PF00269 Small, acid-soluble spore proteins, alpha/beta type CLO1313_RS15310 PF07486 Cell Wall Hydrolase CLO1313_RS15320 PF00571 CBS domain CLO1313_RS15330 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain CLO1313_RS15330 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain CLO1313_RS15335 PF02910 Fumarate reductase flavoprotein C-term CLO1313_RS15335 PF00890 FAD binding domain CLO1313_RS15340 PF02445 Quinolinate synthetase A protein CLO1313_RS15380 PF00759 Glycosyl hydrolase family 9 CLO1313_RS15380 PF00942 Cellulose binding domain CLO1313_RS15385 PF03989 DNA gyrase C-terminal domain, beta-propeller CLO1313_RS15385 PF00521 DNA gyrase/topoisomerase IV, subunit A CLO1313_RS15390 PF02195 ParB-like nuclease domain CLO1313_RS15390 PF17762 HTH domain found in ParB protein CLO1313_RS15395 PF02527 rRNA small subunit methyltransferase G CLO1313_RS15400 PF01134 Glucose inhibited division protein A CLO1313_RS15400 PF13932 GidA associated domain CLO1313_RS15405 PF10396 GTP-binding protein TrmE N-terminus CLO1313_RS15405 PF12631 MnmE helical domain CLO1313_RS15405 PF01926 50S ribosome-binding GTPase CLO1313_RS15410 PF01424 R3H domain CLO1313_RS15410 PF14804 Jag N-terminus CLO1313_RS15415 PF02096 60Kd inner membrane protein CLO1313_RS15420 PF01809 Putative membrane protein insertion efficiency factor CLO1313_RS15425 PF00825 Ribonuclease P CLO1313_RS15430 PF00468 Ribosomal protein L34 CLO1313_RS15440 PF00395 S-layer homology domain CLO1313_RS15440 PF00963 Cohesin domain CLO1313_RS15450 PF02401 LytB protein CLO1313_RS15450 PF00575 S1 RNA binding domain