CLO1313_RS00010 SM00382 ATPases associated with a variety of cellular activities CLO1313_RS00010 SM00760 Bacterial dnaA protein helix-turn-helix domain CLO1313_RS00015 SM00480 DNA polymerase III beta subunit CLO1313_RS00020 SM00363 S4 RNA-binding domain CLO1313_RS00035 SM00387 Histidine kinase-like ATPases CLO1313_RS00035 SM00433 TopoisomeraseII CLO1313_RS00045 SM00470 ParB-like nuclease domain CLO1313_RS00055 SM00028 Tetratricopeptide repeats CLO1313_RS00095 SM01208 CLO1313_RS00095 CLO1313_RS00100 SM00257 Lysin motif CLO1313_RS00100 SM00631 CLO1313_RS00100 CLO1313_RS00140 SM00530 Helix-turn-helix XRE-family like proteins CLO1313_RS00175 SM00257 Lysin motif CLO1313_RS00185 SM00345 helix_turn_helix gluconate operon transcriptional repressor CLO1313_RS00185 SM00895 CLO1313_RS00185 CLO1313_RS00200 SM00382 ATPases associated with a variety of cellular activities CLO1313_RS00260 SM00382 ATPases associated with a variety of cellular activities CLO1313_RS00290 SM01067 Cellulose binding domain CLO1313_RS00335 SM00900 CLO1313_RS00335 CLO1313_RS00375 SM00420 helix_turn_helix, Deoxyribose operon repressor CLO1313_RS00375 SM01134 CLO1313_RS00375 CLO1313_RS00390 SM00861 Transketolase, pyrimidine binding domain CLO1313_RS00405 SM00382 ATPases associated with a variety of cellular activities CLO1313_RS00415 SM00855 Phosphoglycerate mutase family CLO1313_RS00425 SM00487 DEAD-like helicases superfamily CLO1313_RS00425 SM00490 helicase superfamily c-terminal domain CLO1313_RS00440 SM00060 Fibronectin type 3 domain CLO1313_RS00475 SM00354 helix_turn _helix lactose operon repressor CLO1313_RS00480 SM00560 LamG-like jellyroll fold domain CLO1313_RS00480 SM01067 Cellulose binding domain CLO1313_RS00495 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain CLO1313_RS00495 SM00437 Bacterial DNA topoisomerase I DNA-binding domain CLO1313_RS00495 SM00493 CLO1313_RS00495 CLO1313_RS00515 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. CLO1313_RS00545 SM00917 LeuA allosteric (dimerisation) domain CLO1313_RS00595 SM01004 Delta-aminolevulinic acid dehydratase CLO1313_RS00620 SM00382 ATPases associated with a variety of cellular activities CLO1313_RS00650 SM00232 JAB/MPN domain CLO1313_RS00665 SM00909 Sporulation and spore germination CLO1313_RS00700 SM00813 Alpha-L-arabinofuranosidase C-terminus CLO1313_RS00725 SM00729 Elongator protein 3, MiaB family, Radical SAM CLO1313_RS00790 SM00729 Elongator protein 3, MiaB family, Radical SAM CLO1313_RS00830 SM00382 ATPases associated with a variety of cellular activities CLO1313_RS00850 SM01118 CLO1313_RS00850 CLO1313_RS00875 SM00905 Dihydroneopterin aldolase CLO1313_RS00915 SM00633 Glycosyl hydrolase family 10 CLO1313_RS00930 SM00937 CLO1313_RS00930 CLO1313_RS00945 SM00226 Low molecular weight phosphatase family CLO1313_RS01005 SM00382 ATPases associated with a variety of cellular activities CLO1313_RS01020 SM00060 Fibronectin type 3 domain CLO1313_RS01025 SM00060 Fibronectin type 3 domain CLO1313_RS01115 SM01400 CLO1313_RS01115 CLO1313_RS01125 SM00487 DEAD-like helicases superfamily CLO1313_RS01125 SM00490 helicase superfamily c-terminal domain CLO1313_RS01125 SM00982 CLO1313_RS01125 CLO1313_RS01125 SM01058 CarD-like/TRCF domain CLO1313_RS01135 SM00342 helix_turn_helix, arabinose operon control protein CLO1313_RS01170 SM00858 CLO1313_RS01170 CLO1313_RS01240 SM00966 SpoVT / AbrB like domain CLO1313_RS01250 SM00411 bacterial (prokaryotic) histone like domain CLO1313_RS01255 SM00363 S4 RNA-binding domain CLO1313_RS01275 SM00316 Ribosomal protein S1-like RNA-binding domain CLO1313_RS01290 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). CLO1313_RS01305 SM00831 Cation transporter/ATPase, N-terminus CLO1313_RS01370 SM00388 His Kinase A (phosphoacceptor) domain CLO1313_RS01385 SM00028 Tetratricopeptide repeats CLO1313_RS01385 SM00245 tail specific protease CLO1313_RS01405 SM00331 Sigma factor PP2C-like phosphatases CLO1313_RS01435 SM00842 Cell division protein FtsA CLO1313_RS01450 SM00345 helix_turn_helix gluconate operon transcriptional repressor CLO1313_RS01490 SM01005 Alanine racemase, C-terminal domain CLO1313_RS01530 SM00861 Transketolase, pyrimidine binding domain CLO1313_RS01535 SM00382 ATPases associated with a variety of cellular activities CLO1313_RS01590 SM00738 In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold. CLO1313_RS01590 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. CLO1313_RS01595 SM00649 Ribosomal protein L11/L12 CLO1313_RS01620 SM00663 RNA polymerase I subunit A N-terminus CLO1313_RS01640 SM00838 Elongation factor G C-terminus CLO1313_RS01640 SM00889 Elongation factor G, domain IV CLO1313_RS01680 SM00278 Helix-hairpin-helix DNA-binding motif class 1 CLO1313_RS01680 SM00465 GIY-YIG type nucleases (URI domain) CLO1313_RS01700 SM00382 ATPases associated with a variety of cellular activities CLO1313_RS01700 SM00994 ClpX C4-type zinc finger CLO1313_RS01700 SM01086 C-terminal, D2-small domain, of ClpB protein CLO1313_RS01705 SM00382 ATPases associated with a variety of cellular activities CLO1313_RS01730 SM00481 DNA polymerase alpha chain like domain CLO1313_RS01750 SM00849 Metallo-beta-lactamase superfamily CLO1313_RS01760 SM00849 Metallo-beta-lactamase superfamily CLO1313_RS01775 SM00342 helix_turn_helix, arabinose operon control protein CLO1313_RS01775 SM00871 Bacterial transcription activator, effector binding domain CLO1313_RS01780 SM01067 Cellulose binding domain CLO1313_RS01785 SM01067 Cellulose binding domain CLO1313_RS01830 SM00849 Metallo-beta-lactamase superfamily CLO1313_RS01835 SM00100 Cyclic nucleotide-monophosphate binding domain CLO1313_RS01835 SM00419 helix_turn_helix, cAMP Regulatory protein CLO1313_RS01880 SM00644 CLO1313_RS01880 CLO1313_RS01885 SM01018 B12 binding domain CLO1313_RS01910 SM00062 Bacterial periplasmic substrate-binding proteins CLO1313_RS01915 SM00382 ATPases associated with a variety of cellular activities CLO1313_RS01980 SM00062 Bacterial periplasmic substrate-binding proteins CLO1313_RS01990 SM00382 ATPases associated with a variety of cellular activities CLO1313_RS02005 SM00354 helix_turn _helix lactose operon repressor CLO1313_RS02030 SM00448 cheY-homologous receiver domain CLO1313_RS02030 SM00862 Transcriptional regulatory protein, C terminal CLO1313_RS02035 SM00387 Histidine kinase-like ATPases CLO1313_RS02035 SM00388 His Kinase A (phosphoacceptor) domain CLO1313_RS02045 SM00260 Two component signalling adaptor domain CLO1313_RS02050 SM00073 Histidine Phosphotransfer domain CLO1313_RS02050 SM00260 Two component signalling adaptor domain CLO1313_RS02050 SM00387 Histidine kinase-like ATPases CLO1313_RS02050 SM01231 CLO1313_RS02050 CLO1313_RS02055 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). CLO1313_RS02060 SM00138 Methyltransferase, chemotaxis proteins CLO1313_RS02065 SM00448 cheY-homologous receiver domain CLO1313_RS02075 SM00116 Domain in cystathionine beta-synthase and other proteins. CLO1313_RS02075 SM01091 Transporter associated domain CLO1313_RS02180 SM00883 Chaperonin 10 Kd subunit CLO1313_RS02200 SM00636 CLO1313_RS02200 CLO1313_RS02255 SM01403 CLO1313_RS02255 CLO1313_RS02275 SM01382 CLO1313_RS02275 CLO1313_RS02275 SM01383 CLO1313_RS02275 CLO1313_RS02290 SM00322 K homology RNA-binding domain CLO1313_RS02310 SM01374 CLO1313_RS02310 CLO1313_RS02380 SM00316 Ribosomal protein S1-like RNA-binding domain CLO1313_RS02400 SM00363 S4 RNA-binding domain CLO1313_RS02400 SM01390 CLO1313_RS02400 CLO1313_RS02405 SM00662 RNA polymerases D CLO1313_RS02415 SM00382 ATPases associated with a variety of cellular activities CLO1313_RS02445 SM00420 helix_turn_helix, Deoxyribose operon repressor CLO1313_RS02460 SM00636 CLO1313_RS02460 CLO1313_RS02465 SM00857 Resolvase, N terminal domain CLO1313_RS02470 SM00382 ATPases associated with a variety of cellular activities CLO1313_RS02490 SM01058 CarD-like/TRCF domain CLO1313_RS02500 SM00382 ATPases associated with a variety of cellular activities CLO1313_RS02510 SM00387 Histidine kinase-like ATPases CLO1313_RS02515 SM00387 Histidine kinase-like ATPases CLO1313_RS02530 SM00287 Bacterial SH3 domain homologues CLO1313_RS02540 SM00606 Cellulose Binding Domain Type IV CLO1313_RS02540 SM00656 CLO1313_RS02540 CLO1313_RS02615 SM00382 ATPases associated with a variety of cellular activities CLO1313_RS02620 SM00382 ATPases associated with a variety of cellular activities CLO1313_RS02650 SM00345 helix_turn_helix gluconate operon transcriptional repressor CLO1313_RS02655 SM00382 ATPases associated with a variety of cellular activities CLO1313_RS02665 SM00606 Cellulose Binding Domain Type IV CLO1313_RS02670 SM00606 Cellulose Binding Domain Type IV CLO1313_RS02700 SM00419 helix_turn_helix, cAMP Regulatory protein CLO1313_RS02720 SM00062 Bacterial periplasmic substrate-binding proteins CLO1313_RS02725 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). CLO1313_RS02725 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CLO1313_RS02815 SM00382 ATPases associated with a variety of cellular activities CLO1313_RS02840 SM00902 Iron hydrogenase small subunit CLO1313_RS02845 SM00257 Lysin motif CLO1313_RS02850 SM00257 Lysin motif CLO1313_RS02855 SM00257 Lysin motif CLO1313_RS02880 SM00606 Cellulose Binding Domain Type IV CLO1313_RS02955 SM00260 Two component signalling adaptor domain CLO1313_RS02960 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). CLO1313_RS02960 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CLO1313_RS02990 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). CLO1313_RS03005 SM00843 CLO1313_RS03005 CLO1313_RS03035 SM00240 Forkhead associated domain CLO1313_RS03055 SM00028 Tetratricopeptide repeats CLO1313_RS03060 SM00060 Fibronectin type 3 domain CLO1313_RS03070 SM00612 CLO1313_RS03070 CLO1313_RS03160 SM00382 ATPases associated with a variety of cellular activities CLO1313_RS03170 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CLO1313_RS03170 SM00387 Histidine kinase-like ATPases CLO1313_RS03170 SM00388 His Kinase A (phosphoacceptor) domain CLO1313_RS03175 SM00448 cheY-homologous receiver domain CLO1313_RS03175 SM00862 Transcriptional regulatory protein, C terminal CLO1313_RS03200 SM00327 von Willebrand factor (vWF) type A domain CLO1313_RS03210 SM01067 Cellulose binding domain CLO1313_RS03230 SM00460 Transglutaminase/protease-like homologues CLO1313_RS03245 SM00981 CLO1313_RS03245 CLO1313_RS03250 SM00448 cheY-homologous receiver domain CLO1313_RS03260 SM00448 cheY-homologous receiver domain CLO1313_RS03265 SM00411 bacterial (prokaryotic) histone like domain CLO1313_RS03290 SM00788 Adenylosuccinate synthetase CLO1313_RS03320 SM01321 CLO1313_RS03320 CLO1313_RS03395 SM00986 Uracil DNA glycosylase superfamily CLO1313_RS03395 SM00987 UreE urease accessory protein, C-terminal domain CLO1313_RS03400 SM00986 Uracil DNA glycosylase superfamily CLO1313_RS03400 SM00987 UreE urease accessory protein, C-terminal domain CLO1313_RS03435 SM01321 CLO1313_RS03435 CLO1313_RS03480 SM00903 Flavin reductase like domain CLO1313_RS03485 SM00890 Domain of unknown function CLO1313_RS03540 SM00327 von Willebrand factor (vWF) type A domain CLO1313_RS03600 SM00342 helix_turn_helix, arabinose operon control protein CLO1313_RS03615 SM00382 ATPases associated with a variety of cellular activities CLO1313_RS03620 SM00382 ATPases associated with a variety of cellular activities CLO1313_RS03645 SM00855 Phosphoglycerate mutase family CLO1313_RS03655 SM00849 Metallo-beta-lactamase superfamily CLO1313_RS03660 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). CLO1313_RS03675 SM00345 helix_turn_helix gluconate operon transcriptional repressor CLO1313_RS03675 SM00895 CLO1313_RS03675 CLO1313_RS03685 SM00363 S4 RNA-binding domain CLO1313_RS03695 SM01066 Carbohydrate binding domain CLO1313_RS03700 SM00342 helix_turn_helix, arabinose operon control protein CLO1313_RS03700 SM00448 cheY-homologous receiver domain CLO1313_RS03720 SM00046 Diacylglycerol kinase catalytic domain (presumed) CLO1313_RS03730 SM00382 ATPases associated with a variety of cellular activities CLO1313_RS03780 SM00936 Penicillin-binding protein 5, C-terminal domain CLO1313_RS03805 SM00729 Elongator protein 3, MiaB family, Radical SAM CLO1313_RS03840 SM00770 Zinc dependent phospholipase C (alpha toxin) CLO1313_RS03875 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain CLO1313_RS04030 SM00248 ankyrin repeats CLO1313_RS04075 SM00062 Bacterial periplasmic substrate-binding proteins CLO1313_RS04085 SM00382 ATPases associated with a variety of cellular activities CLO1313_RS04120 SM00347 helix_turn_helix multiple antibiotic resistance protein CLO1313_RS04190 SM00855 Phosphoglycerate mutase family CLO1313_RS04205 SM01321 CLO1313_RS04205 CLO1313_RS04255 SM01321 CLO1313_RS04255 CLO1313_RS04285 SM00382 ATPases associated with a variety of cellular activities CLO1313_RS04320 SM00448 cheY-homologous receiver domain CLO1313_RS04320 SM00862 Transcriptional regulatory protein, C terminal CLO1313_RS04345 SM00899 CLO1313_RS04345 CLO1313_RS04350 SM00347 helix_turn_helix multiple antibiotic resistance protein CLO1313_RS04350 SM00529 Helix-turn-helix diphteria tox regulatory element CLO1313_RS04380 SM00155 Phospholipase D. Active site motifs. CLO1313_RS04385 SM00448 cheY-homologous receiver domain CLO1313_RS04385 SM00862 Transcriptional regulatory protein, C terminal CLO1313_RS04390 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CLO1313_RS04390 SM00387 Histidine kinase-like ATPases CLO1313_RS04390 SM00388 His Kinase A (phosphoacceptor) domain CLO1313_RS04395 SM00917 LeuA allosteric (dimerisation) domain CLO1313_RS04430 SM00957 SecA DEAD-like domain CLO1313_RS04430 SM00958 SecA preprotein cross-linking domain CLO1313_RS04440 SM00028 Tetratricopeptide repeats CLO1313_RS04455 SM00448 cheY-homologous receiver domain CLO1313_RS04465 SM00448 cheY-homologous receiver domain CLO1313_RS04465 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. CLO1313_RS04535 SM01321 CLO1313_RS04535 CLO1313_RS04565 SM00738 In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold. CLO1313_RS04615 SM00984 UDP binding domain CLO1313_RS04655 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. CLO1313_RS04655 SM00954 Region found in RelA / SpoT proteins CLO1313_RS04665 SM00849 Metallo-beta-lactamase superfamily CLO1313_RS04670 SM00729 Elongator protein 3, MiaB family, Radical SAM CLO1313_RS04710 SM00240 Forkhead associated domain CLO1313_RS04755 SM00838 Elongation factor G C-terminus CLO1313_RS04760 SM00729 Elongator protein 3, MiaB family, Radical SAM CLO1313_RS04780 SM00271 DnaJ molecular chaperone homology domain CLO1313_RS04795 SM00448 cheY-homologous receiver domain CLO1313_RS04815 SM00072 Guanylate kinase homologues. CLO1313_RS04820 SM01409 CLO1313_RS04820 CLO1313_RS04840 SM00793 Accessory gene regulator B CLO1313_RS04845 SM00729 Elongator protein 3, MiaB family, Radical SAM CLO1313_RS04875 SM00670 Large family of predicted nucleotide-binding domains CLO1313_RS04885 SM00849 Metallo-beta-lactamase superfamily CLO1313_RS04925 SM00857 Resolvase, N terminal domain CLO1313_RS04930 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. CLO1313_RS04955 SM00448 cheY-homologous receiver domain CLO1313_RS04955 SM00862 Transcriptional regulatory protein, C terminal CLO1313_RS04960 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CLO1313_RS04960 SM00387 Histidine kinase-like ATPases CLO1313_RS04960 SM00388 His Kinase A (phosphoacceptor) domain CLO1313_RS04965 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. CLO1313_RS04970 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. CLO1313_RS04980 SM00478 endonuclease III CLO1313_RS04980 SM00525 CLO1313_RS04980 CLO1313_RS04985 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. CLO1313_RS04985 SM00267 diguanylate cyclase CLO1313_RS05005 SM00487 DEAD-like helicases superfamily CLO1313_RS05005 SM00490 helicase superfamily c-terminal domain CLO1313_RS05040 SM00606 Cellulose Binding Domain Type IV CLO1313_RS05045 SM00093 SERine Proteinase INhibitors CLO1313_RS05055 SM00387 Histidine kinase-like ATPases CLO1313_RS05060 SM00421 helix_turn_helix, Lux Regulon CLO1313_RS05060 SM00448 cheY-homologous receiver domain CLO1313_RS05065 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). CLO1313_RS05065 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CLO1313_RS05075 SM00481 DNA polymerase alpha chain like domain CLO1313_RS05110 SM01067 Cellulose binding domain CLO1313_RS05115 SM01217 CLO1313_RS05115 CLO1313_RS05140 SM01001 AIR carboxylase CLO1313_RS05160 SM00798 AICARFT/IMPCHase bienzyme CLO1313_RS05160 SM00851 MGS-like domain CLO1313_RS05165 SM01209 CLO1313_RS05165 CLO1313_RS05165 SM01210 CLO1313_RS05165 CLO1313_RS05170 SM00028 Tetratricopeptide repeats CLO1313_RS05185 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. CLO1313_RS05205 SM00060 Fibronectin type 3 domain CLO1313_RS05205 SM00089 Repeats in polycystic kidney disease 1 (PKD1) and other proteins CLO1313_RS05210 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). CLO1313_RS05225 SM00936 Penicillin-binding protein 5, C-terminal domain CLO1313_RS05230 SM00278 Helix-hairpin-helix DNA-binding motif class 1 CLO1313_RS05235 SM00909 Sporulation and spore germination CLO1313_RS05240 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain CLO1313_RS05275 SM00967 RNA 2'-O ribose methyltransferase substrate binding CLO1313_RS05280 SM01068 Putative carbohydrate binding domain CLO1313_RS05300 SM00382 ATPases associated with a variety of cellular activities CLO1313_RS05300 SM01086 C-terminal, D2-small domain, of ClpB protein CLO1313_RS05355 SM00763 PrkA AAA domain CLO1313_RS05380 SM00996 S-adenosyl-L-homocysteine hydrolase CLO1313_RS05380 SM00997 S-adenosyl-L-homocysteine hydrolase, NAD binding domain CLO1313_RS05445 SM00382 ATPases associated with a variety of cellular activities CLO1313_RS05485 SM00460 Transglutaminase/protease-like homologues CLO1313_RS05535 SM00936 Penicillin-binding protein 5, C-terminal domain CLO1313_RS05585 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor CLO1313_RS05595 SM00226 Low molecular weight phosphatase family CLO1313_RS05620 SM00382 ATPases associated with a variety of cellular activities CLO1313_RS05625 SM00382 ATPases associated with a variety of cellular activities CLO1313_RS05680 SM00382 ATPases associated with a variety of cellular activities CLO1313_RS05680 SM00843 CLO1313_RS05680 CLO1313_RS05685 SM00729 Elongator protein 3, MiaB family, Radical SAM CLO1313_RS05700 SM00322 K homology RNA-binding domain CLO1313_RS05700 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. CLO1313_RS05755 SM01066 Carbohydrate binding domain CLO1313_RS05805 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. CLO1313_RS05840 SM00981 CLO1313_RS05840 CLO1313_RS05845 SM01208 CLO1313_RS05845 CLO1313_RS05875 SM00460 Transglutaminase/protease-like homologues CLO1313_RS05895 SM00852 Probable molybdopterin binding domain CLO1313_RS05905 SM00382 ATPases associated with a variety of cellular activities CLO1313_RS05915 SM00028 Tetratricopeptide repeats CLO1313_RS05990 SM00646 CLO1313_RS05990 CLO1313_RS06000 SM00278 Helix-hairpin-helix DNA-binding motif class 1 CLO1313_RS06000 SM00292 breast cancer carboxy-terminal domain CLO1313_RS06000 SM00532 Ligase N family CLO1313_RS06020 SM00845 GatB domain CLO1313_RS06025 SM00028 Tetratricopeptide repeats CLO1313_RS06060 SM01207 CLO1313_RS06060 CLO1313_RS06095 SM00646 CLO1313_RS06095 CLO1313_RS06110 SM00463 Small MutS-related domain CLO1313_RS06110 SM00533 DNA-binding domain of DNA mismatch repair MUTS family CLO1313_RS06110 SM00534 ATPase domain of DNA mismatch repair MUTS family CLO1313_RS06145 SM00838 Elongation factor G C-terminus CLO1313_RS06190 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. CLO1313_RS06200 SM00479 CLO1313_RS06200 CLO1313_RS06200 SM00481 DNA polymerase alpha chain like domain CLO1313_RS06210 SM00316 Ribosomal protein S1-like RNA-binding domain CLO1313_RS06210 SM00322 K homology RNA-binding domain CLO1313_RS06245 SM00904 Riboflavin kinase CLO1313_RS06285 SM00740 CLO1313_RS06285 CLO1313_RS06370 SM01130 CLO1313_RS06370 CLO1313_RS06375 SM00859 Semialdehyde dehydrogenase, NAD binding domain CLO1313_RS06395 SM01323 CLO1313_RS06395 CLO1313_RS06400 SM01066 Carbohydrate binding domain CLO1313_RS06430 SM00934 Orotidine 5'-phosphate decarboxylase / HUMPS family CLO1313_RS06435 SM01097 Carbamoyl-phosphate synthase small chain, CPSase domain CLO1313_RS06440 SM00851 MGS-like domain CLO1313_RS06440 SM01096 Carbamoyl-phosphate synthetase large chain, oligomerisation domain CLO1313_RS06455 SM00855 Phosphoglycerate mutase family CLO1313_RS06475 SM00729 Elongator protein 3, MiaB family, Radical SAM CLO1313_RS06510 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. CLO1313_RS06515 SM00822 CLO1313_RS06515 CLO1313_RS06520 SM00823 Phosphopantetheine attachment site CLO1313_RS06525 SM00825 Beta-ketoacyl synthase CLO1313_RS06530 SM00358 Double-stranded RNA binding motif CLO1313_RS06530 SM00535 Ribonuclease III family CLO1313_RS06535 SM00729 Elongator protein 3, MiaB family, Radical SAM CLO1313_RS06550 SM00968 SMC proteins Flexible Hinge Domain CLO1313_RS06555 SM00382 ATPases associated with a variety of cellular activities CLO1313_RS06555 SM00962 SRP54-type protein, GTPase domain CLO1313_RS06555 SM00963 SRP54-type protein, helical bundle domain CLO1313_RS06630 SM00633 Glycosyl hydrolase family 10 CLO1313_RS06650 SM00363 S4 RNA-binding domain CLO1313_RS06695 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. CLO1313_RS06700 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. CLO1313_RS06705 SM00400 zinc finger CLO1313_RS06705 SM00493 CLO1313_RS06705 CLO1313_RS06740 SM00448 cheY-homologous receiver domain CLO1313_RS06765 SM00279 Helix-hairpin-helix class 2 (Pol1 family) motifs CLO1313_RS06765 SM00474 3'-5' exonuclease CLO1313_RS06765 SM00475 5'-3' exonuclease CLO1313_RS06765 SM00482 DNA polymerase A domain CLO1313_RS06790 SM00267 diguanylate cyclase CLO1313_RS06800 SM00260 Two component signalling adaptor domain CLO1313_RS06875 SM01230 CLO1313_RS06875 CLO1313_RS06940 SM00518 AP endonuclease family 2 CLO1313_RS06955 SM00841 Elongation factor P, C-terminal CLO1313_RS06955 SM01185 CLO1313_RS06955 CLO1313_RS06965 SM01321 CLO1313_RS06965 CLO1313_RS06970 SM00382 ATPases associated with a variety of cellular activities CLO1313_RS07055 SM00861 Transketolase, pyrimidine binding domain CLO1313_RS07060 SM00363 S4 RNA-binding domain CLO1313_RS07095 SM00382 ATPases associated with a variety of cellular activities CLO1313_RS07105 SM00028 Tetratricopeptide repeats CLO1313_RS07105 SM00220 Serine/Threonine protein kinases, catalytic domain CLO1313_RS07105 SM00267 diguanylate cyclase CLO1313_RS07130 SM00448 cheY-homologous receiver domain CLO1313_RS07135 SM00448 cheY-homologous receiver domain CLO1313_RS07140 SM00073 Histidine Phosphotransfer domain CLO1313_RS07140 SM00260 Two component signalling adaptor domain CLO1313_RS07140 SM00387 Histidine kinase-like ATPases CLO1313_RS07140 SM01231 CLO1313_RS07140 CLO1313_RS07145 SM00260 Two component signalling adaptor domain CLO1313_RS07150 SM00138 Methyltransferase, chemotaxis proteins CLO1313_RS07155 SM00448 cheY-homologous receiver domain CLO1313_RS07160 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) CLO1313_RS07160 SM00091 PAS domain CLO1313_RS07160 SM00387 Histidine kinase-like ATPases CLO1313_RS07160 SM00388 His Kinase A (phosphoacceptor) domain CLO1313_RS07160 SM00448 cheY-homologous receiver domain CLO1313_RS07165 SM00448 cheY-homologous receiver domain CLO1313_RS07170 SM00422 helix_turn_helix, mercury resistance CLO1313_RS07190 SM00387 Histidine kinase-like ATPases CLO1313_RS07190 SM00388 His Kinase A (phosphoacceptor) domain CLO1313_RS07195 SM00448 cheY-homologous receiver domain CLO1313_RS07195 SM00862 Transcriptional regulatory protein, C terminal CLO1313_RS07215 SM00642 Alpha-amylase domain CLO1313_RS07245 SM00363 S4 RNA-binding domain CLO1313_RS07275 SM00729 Elongator protein 3, MiaB family, Radical SAM CLO1313_RS07285 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). CLO1313_RS07285 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CLO1313_RS07300 SM00198 SCP / Tpx-1 / Ag5 / PR-1 / Sc7 family of extracellular domains. CLO1313_RS07310 SM00533 DNA-binding domain of DNA mismatch repair MUTS family CLO1313_RS07310 SM00534 ATPase domain of DNA mismatch repair MUTS family CLO1313_RS07315 SM00853 MutL C terminal dimerisation domain CLO1313_RS07315 SM01340 CLO1313_RS07315 CLO1313_RS07345 SM00382 ATPases associated with a variety of cellular activities CLO1313_RS07345 SM00962 SRP54-type protein, GTPase domain CLO1313_RS07345 SM00963 SRP54-type protein, helical bundle domain CLO1313_RS07440 SM00530 Helix-turn-helix XRE-family like proteins CLO1313_RS07445 SM00382 ATPases associated with a variety of cellular activities CLO1313_RS07470 SM01067 Cellulose binding domain CLO1313_RS07475 SM00245 tail specific protease CLO1313_RS07490 SM00998 Adenylosuccinate lyase C-terminus CLO1313_RS07495 SM00345 helix_turn_helix gluconate operon transcriptional repressor CLO1313_RS07495 SM00866 CLO1313_RS07495 CLO1313_RS07570 SM00448 cheY-homologous receiver domain CLO1313_RS07570 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. CLO1313_RS07575 SM00481 DNA polymerase alpha chain like domain CLO1313_RS07610 SM00138 Methyltransferase, chemotaxis proteins CLO1313_RS07615 SM00562 CLO1313_RS07615 CLO1313_RS07630 SM00563 Phosphate acyltransferases CLO1313_RS07660 SM00855 Phosphoglycerate mutase family CLO1313_RS07725 SM00363 S4 RNA-binding domain CLO1313_RS07765 SM00116 Domain in cystathionine beta-synthase and other proteins. CLO1313_RS07780 SM01240 CLO1313_RS07780 CLO1313_RS07790 SM00936 Penicillin-binding protein 5, C-terminal domain CLO1313_RS07795 SM00941 Pyrimidine nucleoside phosphorylase C-terminal domain CLO1313_RS07860 SM00244 prohibitin homologues CLO1313_RS07865 SM00244 prohibitin homologues CLO1313_RS07890 SM00458 Ricin-type beta-trefoil CLO1313_RS07915 SM00842 Cell division protein FtsA CLO1313_RS07925 SM00729 Elongator protein 3, MiaB family, Radical SAM CLO1313_RS07925 SM00876 Biotin and Thiamin Synthesis associated domain CLO1313_RS07980 SM01018 B12 binding domain CLO1313_RS08020 SM00240 Forkhead associated domain CLO1313_RS08020 SM00382 ATPases associated with a variety of cellular activities CLO1313_RS08035 SM00331 Sigma factor PP2C-like phosphatases CLO1313_RS08035 SM00332 Serine/threonine phosphatases, family 2C, catalytic domain CLO1313_RS08040 SM00220 Serine/Threonine protein kinases, catalytic domain CLO1313_RS08090 SM01067 Cellulose binding domain CLO1313_RS08095 SM00089 Repeats in polycystic kidney disease 1 (PKD1) and other proteins CLO1313_RS08115 SM00529 Helix-turn-helix diphteria tox regulatory element CLO1313_RS08120 SM00899 CLO1313_RS08120 CLO1313_RS08130 SM00382 ATPases associated with a variety of cellular activities CLO1313_RS08160 SM00849 Metallo-beta-lactamase superfamily CLO1313_RS08160 SM01027 Beta-Casp domain CLO1313_RS08185 SM00849 Metallo-beta-lactamase superfamily CLO1313_RS08190 SM00287 Bacterial SH3 domain homologues CLO1313_RS08220 SM00876 Biotin and Thiamin Synthesis associated domain CLO1313_RS08290 SM00857 Resolvase, N terminal domain CLO1313_RS08300 SM00487 DEAD-like helicases superfamily CLO1313_RS08300 SM00490 helicase superfamily c-terminal domain CLO1313_RS08320 SM00857 Resolvase, N terminal domain CLO1313_RS08355 SM00331 Sigma factor PP2C-like phosphatases CLO1313_RS08355 SM00448 cheY-homologous receiver domain CLO1313_RS08360 SM00387 Histidine kinase-like ATPases CLO1313_RS08360 SM00388 His Kinase A (phosphoacceptor) domain CLO1313_RS08380 SM01067 Cellulose binding domain CLO1313_RS08385 SM00983 Thiamin pyrophosphokinase, vitamin B1 binding domain CLO1313_RS08400 SM00220 Serine/Threonine protein kinases, catalytic domain CLO1313_RS08400 SM00740 CLO1313_RS08400 CLO1313_RS08405 SM00331 Sigma factor PP2C-like phosphatases CLO1313_RS08405 SM00332 Serine/threonine phosphatases, family 2C, catalytic domain CLO1313_RS08410 SM00729 Elongator protein 3, MiaB family, Radical SAM CLO1313_RS08440 SM00487 DEAD-like helicases superfamily CLO1313_RS08440 SM00490 helicase superfamily c-terminal domain CLO1313_RS08500 SM01211 CLO1313_RS08500 CLO1313_RS08510 SM00530 Helix-turn-helix XRE-family like proteins CLO1313_RS08535 SM00382 ATPases associated with a variety of cellular activities CLO1313_RS08555 SM00331 Sigma factor PP2C-like phosphatases CLO1313_RS08555 SM00332 Serine/threonine phosphatases, family 2C, catalytic domain CLO1313_RS08560 SM01067 Cellulose binding domain CLO1313_RS08580 SM00382 ATPases associated with a variety of cellular activities CLO1313_RS08585 SM00387 Histidine kinase-like ATPases CLO1313_RS08585 SM00388 His Kinase A (phosphoacceptor) domain CLO1313_RS08590 SM00448 cheY-homologous receiver domain CLO1313_RS08590 SM00862 Transcriptional regulatory protein, C terminal CLO1313_RS08605 SM00382 ATPases associated with a variety of cellular activities CLO1313_RS08610 SM00028 Tetratricopeptide repeats CLO1313_RS08610 SM00729 Elongator protein 3, MiaB family, Radical SAM CLO1313_RS08640 SM01321 CLO1313_RS08640 CLO1313_RS08655 SM00387 Histidine kinase-like ATPases CLO1313_RS08655 SM00388 His Kinase A (phosphoacceptor) domain CLO1313_RS08675 SM00479 CLO1313_RS08675 CLO1313_RS08680 SM00729 Elongator protein 3, MiaB family, Radical SAM CLO1313_RS08690 SM00854 Bacterial capsule synthesis protein PGA_cap CLO1313_RS08745 SM00260 Two component signalling adaptor domain CLO1313_RS08750 SM00073 Histidine Phosphotransfer domain CLO1313_RS08750 SM00260 Two component signalling adaptor domain CLO1313_RS08750 SM00387 Histidine kinase-like ATPases CLO1313_RS08750 SM01231 CLO1313_RS08750 CLO1313_RS08755 SM00448 cheY-homologous receiver domain CLO1313_RS08770 SM00382 ATPases associated with a variety of cellular activities CLO1313_RS08770 SM00962 SRP54-type protein, GTPase domain CLO1313_RS08805 SM00448 cheY-homologous receiver domain CLO1313_RS08860 SM00382 ATPases associated with a variety of cellular activities CLO1313_RS08900 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain CLO1313_RS08900 SM00437 Bacterial DNA topoisomerase I DNA-binding domain CLO1313_RS08900 SM00493 CLO1313_RS08900 CLO1313_RS08925 SM00382 ATPases associated with a variety of cellular activities CLO1313_RS08975 SM00864 Tubulin/FtsZ family, GTPase domain CLO1313_RS08975 SM00865 Tubulin/FtsZ family, C-terminal domain CLO1313_RS08980 SM00842 Cell division protein FtsA CLO1313_RS09030 SM00028 Tetratricopeptide repeats CLO1313_RS09060 SM00902 Iron hydrogenase small subunit CLO1313_RS09060 SM00929 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region CLO1313_RS09065 SM00928 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region CLO1313_RS09075 SM00331 Sigma factor PP2C-like phosphatases CLO1313_RS09080 SM00091 PAS domain CLO1313_RS09100 SM00881 CoA binding domain CLO1313_RS09120 SM00316 Ribosomal protein S1-like RNA-binding domain CLO1313_RS09120 SM00322 K homology RNA-binding domain CLO1313_RS09125 SM01387 CLO1313_RS09125 CLO1313_RS09145 SM01067 Cellulose binding domain CLO1313_RS09170 SM00052 Putative diguanylate phosphodiesterase CLO1313_RS09170 SM00062 Bacterial periplasmic substrate-binding proteins CLO1313_RS09170 SM00091 PAS domain CLO1313_RS09170 SM00267 diguanylate cyclase CLO1313_RS09190 SM01067 Cellulose binding domain CLO1313_RS09205 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). CLO1313_RS09205 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CLO1313_RS09225 SM00382 ATPases associated with a variety of cellular activities CLO1313_RS09230 SM00382 ATPases associated with a variety of cellular activities CLO1313_RS09255 SM00382 ATPases associated with a variety of cellular activities CLO1313_RS09270 SM00829 Enoylreductase CLO1313_RS09280 SM00382 ATPases associated with a variety of cellular activities CLO1313_RS09335 SM00839 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase CLO1313_RS09355 SM00729 Elongator protein 3, MiaB family, Radical SAM CLO1313_RS09365 SM01001 AIR carboxylase CLO1313_RS09380 SM00937 CLO1313_RS09380 CLO1313_RS09385 SM00530 Helix-turn-helix XRE-family like proteins CLO1313_RS09400 SM00344 helix_turn_helix ASNC type CLO1313_RS09500 SM00919 Malic enzyme, NAD binding domain CLO1313_RS09500 SM01274 CLO1313_RS09500 CLO1313_RS09505 SM00903 Flavin reductase like domain CLO1313_RS09510 SM00902 Iron hydrogenase small subunit CLO1313_RS09510 SM00929 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region CLO1313_RS09515 SM00928 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region CLO1313_RS09525 SM00387 Histidine kinase-like ATPases CLO1313_RS09535 SM00481 DNA polymerase alpha chain like domain CLO1313_RS09550 SM00387 Histidine kinase-like ATPases CLO1313_RS09560 SM00382 ATPases associated with a variety of cellular activities CLO1313_RS09595 SM01321 CLO1313_RS09595 CLO1313_RS09640 SM00028 Tetratricopeptide repeats CLO1313_RS09650 SM01007 Class II Aldolase and Adducin N-terminal domain CLO1313_RS09665 SM00758 CLO1313_RS09665 CLO1313_RS09685 SM00382 ATPases associated with a variety of cellular activities CLO1313_RS09685 SM01086 C-terminal, D2-small domain, of ClpB protein CLO1313_RS09695 SM00382 ATPases associated with a variety of cellular activities CLO1313_RS09705 SM00487 DEAD-like helicases superfamily CLO1313_RS09705 SM00490 helicase superfamily c-terminal domain CLO1313_RS09720 SM00434 DNA Topoisomerase IV CLO1313_RS09725 SM00433 TopoisomeraseII CLO1313_RS09750 SM00257 Lysin motif CLO1313_RS09760 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). CLO1313_RS09760 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CLO1313_RS09820 SM00488 CLO1313_RS09820 CLO1313_RS09820 SM00491 CLO1313_RS09820 CLO1313_RS09825 SM00138 Methyltransferase, chemotaxis proteins CLO1313_RS09830 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. CLO1313_RS09830 SM00387 Histidine kinase-like ATPases CLO1313_RS09830 SM00388 His Kinase A (phosphoacceptor) domain CLO1313_RS09830 SM00448 cheY-homologous receiver domain CLO1313_RS09835 SM00387 Histidine kinase-like ATPases CLO1313_RS09835 SM00388 His Kinase A (phosphoacceptor) domain CLO1313_RS09835 SM00448 cheY-homologous receiver domain CLO1313_RS09840 SM01329 CLO1313_RS09840 CLO1313_RS09845 SM00382 ATPases associated with a variety of cellular activities CLO1313_RS09885 SM01068 Putative carbohydrate binding domain CLO1313_RS09895 SM00267 diguanylate cyclase CLO1313_RS09895 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. CLO1313_RS09900 SM00936 Penicillin-binding protein 5, C-terminal domain CLO1313_RS09905 SM01067 Cellulose binding domain CLO1313_RS09910 SM00636 CLO1313_RS09910 CLO1313_RS09925 SM01067 Cellulose binding domain CLO1313_RS09930 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). CLO1313_RS09975 SM00382 ATPases associated with a variety of cellular activities CLO1313_RS09980 SM00387 Histidine kinase-like ATPases CLO1313_RS10005 SM00460 Transglutaminase/protease-like homologues CLO1313_RS10025 SM00534 ATPase domain of DNA mismatch repair MUTS family CLO1313_RS10035 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor CLO1313_RS10105 SM00729 Elongator protein 3, MiaB family, Radical SAM CLO1313_RS10210 SM00873 B3/4 domain CLO1313_RS10210 SM00874 tRNA synthetase B5 domain CLO1313_RS10210 SM00896 Ferredoxin-fold anticodon binding domain CLO1313_RS10240 SM00354 helix_turn _helix lactose operon repressor CLO1313_RS10280 SM01012 CLO1313_RS10280 CLO1313_RS10285 SM01230 CLO1313_RS10285 CLO1313_RS10315 SM01230 CLO1313_RS10315 CLO1313_RS10345 SM00093 SERine Proteinase INhibitors CLO1313_RS10350 SM00093 SERine Proteinase INhibitors CLO1313_RS10365 SM00909 Sporulation and spore germination CLO1313_RS10375 SM00646 CLO1313_RS10375 CLO1313_RS10380 SM00842 Cell division protein FtsA CLO1313_RS10390 SM00382 ATPases associated with a variety of cellular activities CLO1313_RS10395 SM00278 Helix-hairpin-helix DNA-binding motif class 1 CLO1313_RS10465 SM00448 cheY-homologous receiver domain CLO1313_RS10480 SM01103 CLO1313_RS10480 CLO1313_RS10510 SM00316 Ribosomal protein S1-like RNA-binding domain CLO1313_RS10520 SM00729 Elongator protein 3, MiaB family, Radical SAM CLO1313_RS10535 SM00732 Likely ribonuclease with RNase H fold. CLO1313_RS10550 SM00729 Elongator protein 3, MiaB family, Radical SAM CLO1313_RS10565 SM00316 Ribosomal protein S1-like RNA-binding domain CLO1313_RS10565 SM00357 Cold shock protein domain CLO1313_RS10565 SM00955 CLO1313_RS10565 CLO1313_RS10570 SM01321 CLO1313_RS10570 CLO1313_RS10585 SM01192 CLO1313_RS10585 CLO1313_RS10585 SM01193 CLO1313_RS10585 CLO1313_RS10590 SM00267 diguanylate cyclase CLO1313_RS10590 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. CLO1313_RS10615 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain CLO1313_RS10625 SM00822 CLO1313_RS10625 CLO1313_RS10625 SM00825 Beta-ketoacyl synthase CLO1313_RS10625 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. CLO1313_RS10655 SM00267 diguanylate cyclase CLO1313_RS10655 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. CLO1313_RS10700 SM00387 Histidine kinase-like ATPases CLO1313_RS10740 SM00481 DNA polymerase alpha chain like domain CLO1313_RS10830 SM00851 MGS-like domain CLO1313_RS10890 SM00331 Sigma factor PP2C-like phosphatases CLO1313_RS10895 SM00382 ATPases associated with a variety of cellular activities CLO1313_RS10895 SM00464 Found in ATP-dependent protease La (LON) CLO1313_RS10905 SM00260 Two component signalling adaptor domain CLO1313_RS10950 SM01067 Cellulose binding domain CLO1313_RS11010 SM01067 Cellulose binding domain CLO1313_RS11025 SM00635 Bacterial Ig-like domain 2 CLO1313_RS11060 SM00530 Helix-turn-helix XRE-family like proteins CLO1313_RS11090 SM01067 Cellulose binding domain CLO1313_RS11105 SM01067 Cellulose binding domain CLO1313_RS11110 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). CLO1313_RS11110 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CLO1313_RS11115 SM00260 Two component signalling adaptor domain CLO1313_RS11120 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). CLO1313_RS11120 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CLO1313_RS11125 SM00260 Two component signalling adaptor domain CLO1313_RS11145 SM00100 Cyclic nucleotide-monophosphate binding domain CLO1313_RS11150 SM00838 Elongation factor G C-terminus CLO1313_RS11150 SM00889 Elongation factor G, domain IV CLO1313_RS11220 SM00729 Elongator protein 3, MiaB family, Radical SAM CLO1313_RS11220 SM00876 Biotin and Thiamin Synthesis associated domain CLO1313_RS11225 SM00938 Nitrogen regulatory protein P-II CLO1313_RS11305 SM00530 Helix-turn-helix XRE-family like proteins CLO1313_RS11420 SM00849 Metallo-beta-lactamase superfamily CLO1313_RS11435 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). CLO1313_RS11435 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CLO1313_RS11480 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). CLO1313_RS11480 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CLO1313_RS11485 SM00938 Nitrogen regulatory protein P-II CLO1313_RS11490 SM00382 ATPases associated with a variety of cellular activities CLO1313_RS11495 SM00382 ATPases associated with a variety of cellular activities CLO1313_RS11500 SM00347 helix_turn_helix multiple antibiotic resistance protein CLO1313_RS11585 SM00365 Leucine-rich repeat, SDS22-like subfamily CLO1313_RS11585 SM00369 Leucine-rich repeats, typical (most populated) subfamily CLO1313_RS11625 SM00563 Phosphate acyltransferases CLO1313_RS11640 SM00382 ATPases associated with a variety of cellular activities CLO1313_RS11645 SM00387 Histidine kinase-like ATPases CLO1313_RS11645 SM00388 His Kinase A (phosphoacceptor) domain CLO1313_RS11650 SM00448 cheY-homologous receiver domain CLO1313_RS11650 SM00862 Transcriptional regulatory protein, C terminal CLO1313_RS11685 SM00382 ATPases associated with a variety of cellular activities CLO1313_RS11695 SM00530 Helix-turn-helix XRE-family like proteins CLO1313_RS11700 SM01230 CLO1313_RS11700 CLO1313_RS11705 SM00845 GatB domain CLO1313_RS11790 SM00382 ATPases associated with a variety of cellular activities CLO1313_RS11820 SM00382 ATPases associated with a variety of cellular activities CLO1313_RS11845 SM00729 Elongator protein 3, MiaB family, Radical SAM CLO1313_RS11855 SM00062 Bacterial periplasmic substrate-binding proteins CLO1313_RS11865 SM00382 ATPases associated with a variety of cellular activities CLO1313_RS11900 SM00382 ATPases associated with a variety of cellular activities CLO1313_RS11920 SM01133 CLO1313_RS11920 CLO1313_RS11925 SM00342 helix_turn_helix, arabinose operon control protein CLO1313_RS11925 SM00448 cheY-homologous receiver domain CLO1313_RS11930 SM00387 Histidine kinase-like ATPases CLO1313_RS11940 SM00382 ATPases associated with a variety of cellular activities CLO1313_RS11990 SM00487 DEAD-like helicases superfamily CLO1313_RS11990 SM00490 helicase superfamily c-terminal domain CLO1313_RS12025 SM00507 HNH nucleases CLO1313_RS12040 SM00857 Resolvase, N terminal domain CLO1313_RS12050 SM00857 Resolvase, N terminal domain CLO1313_RS12060 SM00257 Lysin motif CLO1313_RS12060 SM00644 CLO1313_RS12060 CLO1313_RS12185 SM00470 ParB-like nuclease domain CLO1313_RS12190 SM00470 ParB-like nuclease domain CLO1313_RS12200 SM00507 HNH nucleases CLO1313_RS12215 SM00990 CLO1313_RS12215 CLO1313_RS12225 SM00382 ATPases associated with a variety of cellular activities CLO1313_RS12235 SM00387 Histidine kinase-like ATPases CLO1313_RS12235 SM00388 His Kinase A (phosphoacceptor) domain CLO1313_RS12240 SM00448 cheY-homologous receiver domain CLO1313_RS12240 SM00862 Transcriptional regulatory protein, C terminal CLO1313_RS12245 SM00849 Metallo-beta-lactamase superfamily CLO1313_RS12285 SM00382 ATPases associated with a variety of cellular activities CLO1313_RS12335 SM00382 ATPases associated with a variety of cellular activities CLO1313_RS12455 SM00382 ATPases associated with a variety of cellular activities CLO1313_RS12470 SM00382 ATPases associated with a variety of cellular activities CLO1313_RS12470 SM01086 C-terminal, D2-small domain, of ClpB protein CLO1313_RS12500 SM00838 Elongation factor G C-terminus CLO1313_RS12500 SM00889 Elongation factor G, domain IV CLO1313_RS12520 SM00881 CoA binding domain CLO1313_RS12525 SM00382 ATPases associated with a variety of cellular activities CLO1313_RS12530 SM00257 Lysin motif CLO1313_RS12530 SM00287 Bacterial SH3 domain homologues CLO1313_RS12530 SM00636 CLO1313_RS12530 CLO1313_RS12535 SM00382 ATPases associated with a variety of cellular activities CLO1313_RS12550 SM00646 CLO1313_RS12550 CLO1313_RS12555 SM00267 diguanylate cyclase CLO1313_RS12555 SM00448 cheY-homologous receiver domain CLO1313_RS12560 SM00635 Bacterial Ig-like domain 2 CLO1313_RS12630 SM00382 ATPases associated with a variety of cellular activities CLO1313_RS12635 SM00382 ATPases associated with a variety of cellular activities CLO1313_RS12655 SM00342 helix_turn_helix, arabinose operon control protein CLO1313_RS12655 SM00448 cheY-homologous receiver domain CLO1313_RS12660 SM00387 Histidine kinase-like ATPases CLO1313_RS12660 SM00388 His Kinase A (phosphoacceptor) domain CLO1313_RS12660 SM00448 cheY-homologous receiver domain CLO1313_RS12665 SM00387 Histidine kinase-like ATPases CLO1313_RS12665 SM00448 cheY-homologous receiver domain CLO1313_RS12825 SM00633 Glycosyl hydrolase family 10 CLO1313_RS12830 SM00729 Elongator protein 3, MiaB family, Radical SAM CLO1313_RS12830 SM00876 Biotin and Thiamin Synthesis associated domain CLO1313_RS12865 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CLO1313_RS12865 SM00387 Histidine kinase-like ATPases CLO1313_RS12865 SM00388 His Kinase A (phosphoacceptor) domain CLO1313_RS12870 SM00448 cheY-homologous receiver domain CLO1313_RS12870 SM00862 Transcriptional regulatory protein, C terminal CLO1313_RS12925 SM00357 Cold shock protein domain CLO1313_RS12945 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. CLO1313_RS12945 SM00245 tail specific protease CLO1313_RS12960 SM00382 ATPases associated with a variety of cellular activities CLO1313_RS12970 SM00382 ATPases associated with a variety of cellular activities CLO1313_RS12975 SM00859 Semialdehyde dehydrogenase, NAD binding domain CLO1313_RS12995 SM01097 Carbamoyl-phosphate synthase small chain, CPSase domain CLO1313_RS13000 SM00851 MGS-like domain CLO1313_RS13000 SM01096 Carbamoyl-phosphate synthetase large chain, oligomerisation domain CLO1313_RS13000 SM01209 CLO1313_RS13000 CLO1313_RS13105 SM00028 Tetratricopeptide repeats CLO1313_RS13120 SM00606 Cellulose Binding Domain Type IV CLO1313_RS13125 SM01321 CLO1313_RS13125 CLO1313_RS13140 SM00028 Tetratricopeptide repeats CLO1313_RS13145 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CLO1313_RS13145 SM00387 Histidine kinase-like ATPases CLO1313_RS13145 SM00388 His Kinase A (phosphoacceptor) domain CLO1313_RS13150 SM00448 cheY-homologous receiver domain CLO1313_RS13150 SM00862 Transcriptional regulatory protein, C terminal CLO1313_RS13155 SM00831 Cation transporter/ATPase, N-terminus CLO1313_RS13205 SM00306 Hint (Hedgehog/Intein) domain N-terminal region CLO1313_RS13210 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. CLO1313_RS13210 SM00245 tail specific protease CLO1313_RS13235 SM00836 DALR anticodon binding domain CLO1313_RS13235 SM01016 Arginyl tRNA synthetase N terminal dom CLO1313_RS13255 SM00116 Domain in cystathionine beta-synthase and other proteins. CLO1313_RS13255 SM00924 MgtE intracellular N domain CLO1313_RS13265 SM00834 Putative regulatory protein CLO1313_RS13270 SM00909 Sporulation and spore germination CLO1313_RS13275 SM01133 CLO1313_RS13275 CLO1313_RS13335 SM00316 Ribosomal protein S1-like RNA-binding domain CLO1313_RS13335 SM00732 Likely ribonuclease with RNase H fold. CLO1313_RS13375 SM00363 S4 RNA-binding domain CLO1313_RS13380 SM00606 Cellulose Binding Domain Type IV CLO1313_RS13380 SM00633 Glycosyl hydrolase family 10 CLO1313_RS13430 SM00028 Tetratricopeptide repeats CLO1313_RS13450 SM00306 Hint (Hedgehog/Intein) domain N-terminal region CLO1313_RS13495 SM00857 Resolvase, N terminal domain CLO1313_RS13530 SM00306 Hint (Hedgehog/Intein) domain N-terminal region CLO1313_RS13535 SM00942 Primase C terminal 1 (PriCT-1) CLO1313_RS13535 SM00943 Bifunctional DNA primase/polymerase, N-terminal CLO1313_RS13550 SM00306 Hint (Hedgehog/Intein) domain N-terminal region CLO1313_RS13580 SM00306 Hint (Hedgehog/Intein) domain N-terminal region CLO1313_RS13585 SM00942 Primase C terminal 1 (PriCT-1) CLO1313_RS13590 SM00943 Bifunctional DNA primase/polymerase, N-terminal CLO1313_RS13605 SM00306 Hint (Hedgehog/Intein) domain N-terminal region CLO1313_RS13620 SM01321 CLO1313_RS13620 CLO1313_RS13635 SM00220 Serine/Threonine protein kinases, catalytic domain CLO1313_RS13700 SM00306 Hint (Hedgehog/Intein) domain N-terminal region CLO1313_RS13715 SM00306 Hint (Hedgehog/Intein) domain N-terminal region CLO1313_RS13730 SM00306 Hint (Hedgehog/Intein) domain N-terminal region CLO1313_RS13785 SM00506 Appr-1"-p processing enzyme CLO1313_RS13810 SM00967 RNA 2'-O ribose methyltransferase substrate binding CLO1313_RS13835 SM00840 CLO1313_RS13835 CLO1313_RS13850 SM00478 endonuclease III CLO1313_RS13890 SM00387 Histidine kinase-like ATPases CLO1313_RS13890 SM00388 His Kinase A (phosphoacceptor) domain CLO1313_RS13895 SM00881 CoA binding domain CLO1313_RS13975 SM00650 Ribosomal RNA adenine dimethylases CLO1313_RS13980 SM01208 CLO1313_RS13980 CLO1313_RS14015 SM00966 SpoVT / AbrB like domain CLO1313_RS14040 SM00382 ATPases associated with a variety of cellular activities CLO1313_RS14070 SM00382 ATPases associated with a variety of cellular activities CLO1313_RS14080 SM00448 cheY-homologous receiver domain CLO1313_RS14080 SM00862 Transcriptional regulatory protein, C terminal CLO1313_RS14085 SM00387 Histidine kinase-like ATPases CLO1313_RS14105 SM00382 ATPases associated with a variety of cellular activities CLO1313_RS14110 SM00633 Glycosyl hydrolase family 10 CLO1313_RS14215 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. CLO1313_RS14220 SM00493 CLO1313_RS14220 CLO1313_RS14230 SM00382 ATPases associated with a variety of cellular activities CLO1313_RS14250 SM01067 Cellulose binding domain CLO1313_RS14340 SM00331 Sigma factor PP2C-like phosphatases CLO1313_RS14365 SM00487 DEAD-like helicases superfamily CLO1313_RS14375 SM00357 Cold shock protein domain CLO1313_RS14375 SM00382 ATPases associated with a variety of cellular activities CLO1313_RS14375 SM00959 Rho termination factor, N-terminal domain CLO1313_RS14425 SM00710 Parallel beta-helix repeats CLO1313_RS14430 SM00656 CLO1313_RS14430 CLO1313_RS14485 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. CLO1313_RS14485 SM00267 diguanylate cyclase CLO1313_RS14495 SM00642 Alpha-amylase domain CLO1313_RS14510 SM00606 Cellulose Binding Domain Type IV CLO1313_RS14515 SM00606 Cellulose Binding Domain Type IV CLO1313_RS14520 SM00606 Cellulose Binding Domain Type IV CLO1313_RS14525 SM00606 Cellulose Binding Domain Type IV CLO1313_RS14525 SM00710 Parallel beta-helix repeats CLO1313_RS14530 SM00606 Cellulose Binding Domain Type IV CLO1313_RS14535 SM00606 Cellulose Binding Domain Type IV CLO1313_RS14550 SM00422 helix_turn_helix, mercury resistance CLO1313_RS14550 SM00871 Bacterial transcription activator, effector binding domain CLO1313_RS14560 SM00382 ATPases associated with a variety of cellular activities CLO1313_RS14565 SM00387 Histidine kinase-like ATPases CLO1313_RS14570 SM00448 cheY-homologous receiver domain CLO1313_RS14570 SM00862 Transcriptional regulatory protein, C terminal CLO1313_RS14645 SM01329 CLO1313_RS14645 CLO1313_RS14660 SM00342 helix_turn_helix, arabinose operon control protein CLO1313_RS14750 SM00858 CLO1313_RS14750 CLO1313_RS14850 SM00382 ATPases associated with a variety of cellular activities CLO1313_RS14870 SM00382 ATPases associated with a variety of cellular activities CLO1313_RS14880 SM00977 TilS substrate C-terminal domain CLO1313_RS14955 SM00382 ATPases associated with a variety of cellular activities CLO1313_RS14990 SM00382 ATPases associated with a variety of cellular activities CLO1313_RS15000 SM00062 Bacterial periplasmic substrate-binding proteins CLO1313_RS15010 SM00382 ATPases associated with a variety of cellular activities CLO1313_RS15015 SM00448 cheY-homologous receiver domain CLO1313_RS15020 SM00138 Methyltransferase, chemotaxis proteins CLO1313_RS15025 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). CLO1313_RS15030 SM00073 Histidine Phosphotransfer domain CLO1313_RS15030 SM00260 Two component signalling adaptor domain CLO1313_RS15030 SM00387 Histidine kinase-like ATPases CLO1313_RS15030 SM01231 CLO1313_RS15030 CLO1313_RS15035 SM00260 Two component signalling adaptor domain CLO1313_RS15045 SM00342 helix_turn_helix, arabinose operon control protein CLO1313_RS15060 SM00382 ATPases associated with a variety of cellular activities CLO1313_RS15095 SM00487 DEAD-like helicases superfamily CLO1313_RS15095 SM00490 helicase superfamily c-terminal domain CLO1313_RS15170 SM00900 CLO1313_RS15170 CLO1313_RS15185 SM00849 Metallo-beta-lactamase superfamily CLO1313_RS15210 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CLO1313_RS15210 SM00387 Histidine kinase-like ATPases CLO1313_RS15210 SM00388 His Kinase A (phosphoacceptor) domain CLO1313_RS15215 SM00448 cheY-homologous receiver domain CLO1313_RS15215 SM00862 Transcriptional regulatory protein, C terminal CLO1313_RS15260 SM00984 UDP binding domain CLO1313_RS15290 SM00028 Tetratricopeptide repeats CLO1313_RS15320 SM00116 Domain in cystathionine beta-synthase and other proteins. CLO1313_RS15350 SM00793 Accessory gene regulator B CLO1313_RS15375 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. CLO1313_RS15380 SM01067 Cellulose binding domain CLO1313_RS15385 SM00434 DNA Topoisomerase IV CLO1313_RS15390 SM00470 ParB-like nuclease domain CLO1313_RS15400 SM01228 CLO1313_RS15400 CLO1313_RS15410 SM00322 K homology RNA-binding domain CLO1313_RS15410 SM00393 Putative single-stranded nucleic acids-binding domain CLO1313_RS15410 SM01245 CLO1313_RS15410 CLO1313_RS15420 SM01234 CLO1313_RS15420 CLO1313_RS15450 SM00316 Ribosomal protein S1-like RNA-binding domain