locus-tag class description RGna_RS00045 PF02397 Bacterial sugar transferase RGna_RS00055 PF03816 Cell envelope-related transcriptional attenuator domain RGna_RS00060 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family RGna_RS00065 PF02397 Bacterial sugar transferase RGna_RS00075 PF00535 Glycosyl transferase family 2 RGna_RS00085 PF13439 Glycosyltransferase Family 4 RGna_RS00085 PF00534 Glycosyl transferases group 1 RGna_RS00090 PF00535 Glycosyl transferase family 2 RGna_RS00095 PF01501 Glycosyl transferase family 8 RGna_RS00095 PF00535 Glycosyl transferase family 2 RGna_RS00120 PF00534 Glycosyl transferases group 1 RGna_RS00120 PF13439 Glycosyltransferase Family 4 RGna_RS00135 PF00535 Glycosyl transferase family 2 RGna_RS00145 PF07722 Peptidase C26 RGna_RS00150 PF01244 Membrane dipeptidase (Peptidase family M19) RGna_RS00155 PF00860 Permease family RGna_RS00160 PF00764 Arginosuccinate synthase RGna_RS00170 PF00696 Amino acid kinase family RGna_RS00170 PF01472 PUA domain RGna_RS00175 PF00171 Aldehyde dehydrogenase family RGna_RS00180 PF02774 Semialdehyde dehydrogenase, dimerisation domain RGna_RS00180 PF01118 Semialdehyde dehydrogenase, NAD binding domain RGna_RS00190 PF01960 ArgJ family RGna_RS00195 PF00696 Amino acid kinase family RGna_RS00200 PF00202 Aminotransferase class-III RGna_RS00210 PF10531 SLBB domain RGna_RS00215 PF00072 Response regulator receiver domain RGna_RS00215 PF00486 Transcriptional regulatory protein, C terminal RGna_RS00220 PF18698 Histidine kinase sensor domain RGna_RS00220 PF00512 His Kinase A (phospho-acceptor) domain RGna_RS00220 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RGna_RS00220 PF00672 HAMP domain RGna_RS00220 PF00989 PAS fold RGna_RS00230 PF13567 Domain of unknown function (DUF4131) RGna_RS00230 PF03772 Competence protein RGna_RS00230 PF00753 Metallo-beta-lactamase superfamily RGna_RS00255 PF00145 C-5 cytosine-specific DNA methylase RGna_RS00265 PF07728 AAA domain (dynein-related subfamily) RGna_RS00270 PF09563 LlaJI restriction endonuclease RGna_RS00355 PF02452 PemK-like, MazF-like toxin of type II toxin-antitoxin system RGna_RS00375 PF01555 DNA methylase RGna_RS00380 PF00145 C-5 cytosine-specific DNA methylase RGna_RS00415 PF03354 Phage Terminase RGna_RS00425 PF04860 Phage portal protein RGna_RS00430 PF00574 Clp protease RGna_RS00475 PF00665 Integrase core domain RGna_RS00475 PF13276 HTH-like domain RGna_RS00475 PF13333 Integrase core domain RGna_RS00510 PF08275 DNA primase catalytic core, N-terminal domain RGna_RS00510 PF01807 CHC2 zinc finger RGna_RS00595 PF05105 Bacteriophage holin family RGna_RS00635 PF07508 Recombinase RGna_RS00635 PF00239 Resolvase, N terminal domain RGna_RS00680 PF01232 Mannitol dehydrogenase Rossmann domain RGna_RS00680 PF08125 Mannitol dehydrogenase C-terminal domain RGna_RS00685 PF08666 SAF domain RGna_RS00685 PF04295 D-galactarate dehydratase / Altronate hydrolase, C terminus RGna_RS00690 PF02614 Glucuronate isomerase RGna_RS00710 PF00356 Bacterial regulatory proteins, lacI family RGna_RS00710 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family RGna_RS00715 PF00295 Glycosyl hydrolases family 28 RGna_RS00720 PF12708 Pectate lyase superfamily protein RGna_RS00720 PF00353 RTX calcium-binding nonapeptide repeat (4 copies) RGna_RS00730 PF06969 HemN C-terminal domain RGna_RS00730 PF04055 Radical SAM superfamily RGna_RS00740 PF00486 Transcriptional regulatory protein, C terminal RGna_RS00740 PF00072 Response regulator receiver domain RGna_RS00745 PF00672 HAMP domain RGna_RS00745 PF00512 His Kinase A (phospho-acceptor) domain RGna_RS00745 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RGna_RS00755 PF01628 HrcA protein C terminal domain RGna_RS00760 PF01025 GrpE RGna_RS00765 PF00012 Hsp70 protein RGna_RS00770 PF00226 DnaJ domain RGna_RS00770 PF01556 DnaJ C terminal domain RGna_RS00770 PF00684 DnaJ central domain RGna_RS00785 PF01554 MatE RGna_RS00790 PF01638 HxlR-like helix-turn-helix RGna_RS00795 PF01032 FecCD transport family RGna_RS00800 PF01032 FecCD transport family RGna_RS00805 PF00005 ABC transporter RGna_RS00815 PF10609 NUBPL iron-transfer P-loop NTPase RGna_RS00820 PF00575 S1 RNA binding domain RGna_RS00825 PF01368 DHH family RGna_RS00825 PF07085 DRTGG domain RGna_RS00825 PF00571 CBS domain RGna_RS00825 PF02833 DHHA2 domain RGna_RS00830 PF01613 Flavin reductase like domain RGna_RS00835 PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain RGna_RS00835 PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain RGna_RS00840 PF08544 GHMP kinases C terminal RGna_RS00840 PF10509 Galactokinase galactose-binding signature RGna_RS00840 PF00288 GHMP kinases N terminal domain RGna_RS00845 PF02311 AraC-like ligand binding domain RGna_RS00845 PF12833 Helix-turn-helix domain RGna_RS00850 PF01522 Polysaccharide deacetylase RGna_RS00850 PF13739 Deacetylase PdaC RGna_RS00850 PF11738 Protein of unknown function (DUF3298) RGna_RS00855 PF00899 ThiF family RGna_RS00860 PF12002 MgsA AAA+ ATPase C terminal RGna_RS00860 PF05496 Holliday junction DNA helicase RuvB P-loop domain RGna_RS00860 PF16193 AAA C-terminal domain RGna_RS00870 PF04055 Radical SAM superfamily RGna_RS00870 PF16199 Radical_SAM C-terminal domain RGna_RS00875 PF03949 Malic enzyme, NAD binding domain RGna_RS00875 PF00390 Malic enzyme, N-terminal domain RGna_RS00880 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain RGna_RS00880 PF07498 Rho termination factor, N-terminal domain RGna_RS00880 PF07497 Rho termination factor, RNA-binding domain RGna_RS00885 PF01226 Formate/nitrite transporter RGna_RS00890 PF01197 Ribosomal protein L31 RGna_RS00895 PF07136 Protein of unknown function (DUF1385) RGna_RS00900 PF05175 Methyltransferase small domain RGna_RS00900 PF17827 PrmC N-terminal domain RGna_RS00905 PF00472 RF-1 domain RGna_RS00905 PF03462 PCRF domain RGna_RS00940 PF00155 Aminotransferase class I and II RGna_RS00945 PF00155 Aminotransferase class I and II RGna_RS00955 PF01381 Helix-turn-helix RGna_RS00970 PF17657 Bacterial DNA polymerase III alpha subunit finger domain RGna_RS00970 PF00929 Exonuclease RGna_RS00970 PF02811 PHP domain RGna_RS00970 PF11490 DNA polymerase III polC-type N-terminus II RGna_RS00970 PF07733 Bacterial DNA polymerase III alpha NTPase domain RGna_RS00970 PF14579 Helix-hairpin-helix motif RGna_RS00975 PF00464 Serine hydroxymethyltransferase RGna_RS00980 PF00313 'Cold-shock' DNA-binding domain RGna_RS00985 PF02082 Transcriptional regulator RGna_RS00990 PF02082 Transcriptional regulator RGna_RS00995 PF00291 Pyridoxal-phosphate dependent enzyme RGna_RS01000 PF00381 PTS HPr component phosphorylation site RGna_RS01005 PF05524 PEP-utilising enzyme, N-terminal RGna_RS01005 PF02896 PEP-utilising enzyme, TIM barrel domain RGna_RS01005 PF00391 PEP-utilising enzyme, mobile domain RGna_RS01025 PF01145 SPFH domain / Band 7 family RGna_RS01030 PF06733 DEAD_2 RGna_RS01030 PF13307 Helicase C-terminal domain RGna_RS01035 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RGna_RS01035 PF03466 LysR substrate binding domain RGna_RS01045 PF00586 AIR synthase related protein, N-terminal domain RGna_RS01045 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain RGna_RS01045 PF02769 AIR synthase related protein, C-terminal domain RGna_RS01065 PF02073 Thermophilic metalloprotease (M29) RGna_RS01085 PF02542 YgbB family RGna_RS01095 PF00132 Bacterial transferase hexapeptide (six repeats) RGna_RS01100 PF01406 tRNA synthetases class I (C) catalytic domain RGna_RS01100 PF09190 DALR domain RGna_RS01105 PF00636 Ribonuclease III domain RGna_RS01110 PF00588 SpoU rRNA Methylase family RGna_RS01110 PF08032 RNA 2'-O ribose methyltransferase substrate binding RGna_RS01115 PF04542 Sigma-70 region 2 RGna_RS01115 PF08281 Sigma-70, region 4 RGna_RS01135 PF02580 D-Tyr-tRNA(Tyr) deacylase RGna_RS01150 PF03313 Serine dehydratase alpha chain RGna_RS01155 PF08281 Sigma-70, region 4 RGna_RS01155 PF04542 Sigma-70 region 2 RGna_RS01170 PF00209 Sodium:neurotransmitter symporter family RGna_RS01175 PF00749 tRNA synthetases class I (E and Q), catalytic domain RGna_RS01175 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain RGna_RS01180 PF00392 Bacterial regulatory proteins, gntR family RGna_RS01180 PF00155 Aminotransferase class I and II RGna_RS01190 PF13091 PLD-like domain RGna_RS01195 PF00709 Adenylosuccinate synthetase RGna_RS01205 PF07517 SecA DEAD-like domain RGna_RS01205 PF01043 SecA preprotein cross-linking domain RGna_RS01205 PF07516 SecA Wing and Scaffold domain RGna_RS01205 PF02810 SEC-C motif RGna_RS01215 PF00248 Aldo/keto reductase family RGna_RS01230 PF01594 AI-2E family transporter RGna_RS01235 PF04204 Homoserine O-succinyltransferase RGna_RS01245 PF00155 Aminotransferase class I and II RGna_RS01250 PF01070 FMN-dependent dehydrogenase RGna_RS01255 PF03477 ATP cone domain RGna_RS01255 PF13597 Anaerobic ribonucleoside-triphosphate reductase RGna_RS01265 PF00692 dUTPase RGna_RS01270 PF00912 Transglycosylase RGna_RS01270 PF00905 Penicillin binding protein transpeptidase domain RGna_RS01275 PF03323 Bacillus/Clostridium GerA spore germination protein RGna_RS01280 PF02645 Uncharacterised protein, DegV family COG1307 RGna_RS01285 PF00209 Sodium:neurotransmitter symporter family RGna_RS01290 PF00707 Translation initiation factor IF-3, C-terminal domain RGna_RS01290 PF05198 Translation initiation factor IF-3, N-terminal domain RGna_RS01295 PF01632 Ribosomal protein L35 RGna_RS01300 PF00453 Ribosomal protein L20 RGna_RS01325 PF01554 MatE RGna_RS01330 PF03976 Polyphosphate kinase 2 (PPK2) RGna_RS01335 PF10410 DnaB-helicase binding domain of primase RGna_RS01335 PF08275 DNA primase catalytic core, N-terminal domain RGna_RS01335 PF01807 CHC2 zinc finger RGna_RS01340 PF00140 Sigma-70 factor, region 1.2 RGna_RS01340 PF04542 Sigma-70 region 2 RGna_RS01340 PF03979 Sigma-70 factor, region 1.1 RGna_RS01340 PF04545 Sigma-70, region 4 RGna_RS01340 PF04539 Sigma-70 region 3 RGna_RS01345 PF04816 tRNA (adenine(22)-N(1))-methyltransferase RGna_RS01350 PF01784 NIF3 (NGG1p interacting factor 3) RGna_RS01355 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) RGna_RS01355 PF02824 TGS domain RGna_RS01355 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain RGna_RS01355 PF03129 Anticodon binding domain RGna_RS01360 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 RGna_RS01360 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) RGna_RS01365 PF13416 Bacterial extracellular solute-binding protein RGna_RS01370 PF00528 Binding-protein-dependent transport system inner membrane component RGna_RS01380 PF01264 Chorismate synthase RGna_RS01390 PF01702 Queuine tRNA-ribosyltransferase RGna_RS01400 PF00180 Isocitrate/isopropylmalate dehydrogenase RGna_RS01405 PF00920 Dehydratase family RGna_RS01410 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain RGna_RS01410 PF00205 Thiamine pyrophosphate enzyme, central domain RGna_RS01410 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain RGna_RS01415 PF00266 Aminotransferase class-V RGna_RS01420 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain RGna_RS01420 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain RGna_RS01425 PF00682 HMGL-like RGna_RS01430 PF00392 Bacterial regulatory proteins, gntR family RGna_RS01430 PF07729 FCD domain RGna_RS01435 PF00180 Isocitrate/isopropylmalate dehydrogenase RGna_RS01440 PF04542 Sigma-70 region 2 RGna_RS01440 PF08281 Sigma-70, region 4 RGna_RS01445 PF13490 Putative zinc-finger RGna_RS01450 PF00005 ABC transporter RGna_RS01450 PF16326 ABC transporter C-terminal domain RGna_RS01450 PF12848 ABC transporter RGna_RS01455 PF06971 Putative DNA-binding protein N-terminus RGna_RS01455 PF02629 CoA binding domain RGna_RS01460 PF01256 Carbohydrate kinase RGna_RS01460 PF03853 YjeF-related protein N-terminus RGna_RS01465 PF00842 Alanine racemase, C-terminal domain RGna_RS01465 PF01168 Alanine racemase, N-terminal domain RGna_RS01470 PF02452 PemK-like, MazF-like toxin of type II toxin-antitoxin system RGna_RS01475 PF01709 Transcriptional regulator RGna_RS01485 PF01053 Cys/Met metabolism PLP-dependent enzyme RGna_RS01490 PF00574 Clp protease RGna_RS01495 PF17854 FtsK alpha domain RGna_RS01495 PF13491 4TM region of DNA translocase FtsK/SpoIIIE RGna_RS01495 PF01580 FtsK/SpoIIIE family RGna_RS01495 PF09397 Ftsk gamma domain RGna_RS01500 PF01268 Formate--tetrahydrofolate ligase RGna_RS01505 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain RGna_RS01505 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain RGna_RS01515 PF00465 Iron-containing alcohol dehydrogenase RGna_RS01520 PF10418 Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B RGna_RS01520 PF00175 Oxidoreductase NAD-binding domain RGna_RS01525 PF07992 Pyridine nucleotide-disulphide oxidoreductase RGna_RS01525 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster RGna_RS01535 PF05525 Branched-chain amino acid transport protein RGna_RS01550 PF02590 Predicted SPOUT methyltransferase RGna_RS01560 PF01209 ubiE/COQ5 methyltransferase family RGna_RS01570 PF07969 Amidohydrolase family RGna_RS01585 PF00005 ABC transporter RGna_RS01585 PF03459 TOBE domain RGna_RS01595 PF01869 BadF/BadG/BcrA/BcrD ATPase family RGna_RS01605 PF00391 PEP-utilising enzyme, mobile domain RGna_RS01605 PF00224 Pyruvate kinase, barrel domain RGna_RS01605 PF02887 Pyruvate kinase, alpha/beta domain RGna_RS01615 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain RGna_RS01615 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain RGna_RS01630 PF00440 Bacterial regulatory proteins, tetR family RGna_RS01635 PF00005 ABC transporter RGna_RS01635 PF00664 ABC transporter transmembrane region RGna_RS01635 PF04954 Siderophore-interacting protein RGna_RS01635 PF08021 Siderophore-interacting FAD-binding domain RGna_RS01640 PF00005 ABC transporter RGna_RS01640 PF00664 ABC transporter transmembrane region RGna_RS01650 PF01554 MatE RGna_RS01660 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term RGna_RS01660 PF12833 Helix-turn-helix domain RGna_RS01665 PF07992 Pyridine nucleotide-disulphide oxidoreductase RGna_RS01665 PF00724 NADH:flavin oxidoreductase / NADH oxidase family RGna_RS01670 PF00860 Permease family RGna_RS01690 PF05698 Bacterial trigger factor protein (TF) C-terminus RGna_RS01700 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain RGna_RS01700 PF00476 DNA polymerase family A RGna_RS01700 PF01367 5'-3' exonuclease, C-terminal SAM fold RGna_RS01705 PF01121 Dephospho-CoA kinase RGna_RS01710 PF00753 Metallo-beta-lactamase superfamily RGna_RS01720 PF05167 Uncharacterised ACR (DUF711) RGna_RS01725 PF02645 Uncharacterised protein, DegV family COG1307 RGna_RS01735 PF00512 His Kinase A (phospho-acceptor) domain RGna_RS01735 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RGna_RS01735 PF00672 HAMP domain RGna_RS01740 PF02687 FtsX-like permease family RGna_RS01740 PF12704 MacB-like periplasmic core domain RGna_RS01745 PF12704 MacB-like periplasmic core domain RGna_RS01745 PF02687 FtsX-like permease family RGna_RS01750 PF00005 ABC transporter RGna_RS01795 PF00145 C-5 cytosine-specific DNA methylase RGna_RS01815 PF04203 Sortase domain RGna_RS01835 PF02773 S-adenosylmethionine synthetase, C-terminal domain RGna_RS01835 PF02772 S-adenosylmethionine synthetase, central domain RGna_RS01835 PF00438 S-adenosylmethionine synthetase, N-terminal domain RGna_RS01885 PF00877 NlpC/P60 family RGna_RS01890 PF04237 YjbR RGna_RS01905 PF00512 His Kinase A (phospho-acceptor) domain RGna_RS01905 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RGna_RS01905 PF18719 ArlS sensor domain RGna_RS01910 PF00486 Transcriptional regulatory protein, C terminal RGna_RS01910 PF00072 Response regulator receiver domain RGna_RS01945 PF02275 Linear amide C-N hydrolases, choloylglycine hydrolase family RGna_RS01970 PF00571 CBS domain RGna_RS01970 PF03448 MgtE intracellular N domain RGna_RS01970 PF01769 Divalent cation transporter RGna_RS01980 PF00871 Acetokinase family RGna_RS01990 PF01783 Ribosomal L32p protein family RGna_RS01995 PF02504 Fatty acid synthesis protein RGna_RS02000 PF00550 Phosphopantetheine attachment site RGna_RS02005 PF14622 Ribonuclease-III-like RGna_RS02005 PF00035 Double-stranded RNA binding motif RGna_RS02010 PF06470 SMC proteins Flexible Hinge Domain RGna_RS02010 PF02463 RecF/RecN/SMC N terminal domain RGna_RS02015 PF02881 SRP54-type protein, helical bundle domain RGna_RS02015 PF00448 SRP54-type protein, GTPase domain RGna_RS02020 PF00291 Pyridoxal-phosphate dependent enzyme RGna_RS02020 PF13291 ACT domain RGna_RS02055 PF03965 Penicillinase repressor RGna_RS02065 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase RGna_RS02065 PF14572 Phosphoribosyl synthetase-associated domain RGna_RS02075 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal RGna_RS02075 PF01926 50S ribosome-binding GTPase RGna_RS02080 PF02660 Glycerol-3-phosphate acyltransferase RGna_RS02085 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus RGna_RS02085 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus RGna_RS02100 PF12706 Beta-lactamase superfamily domain RGna_RS02110 PF00793 DAHP synthetase I family RGna_RS02115 PF00248 Aldo/keto reductase family RGna_RS02120 PF01948 Aspartate carbamoyltransferase regulatory chain, allosteric domain RGna_RS02120 PF02748 Aspartate carbamoyltransferase regulatory chain, metal binding domain RGna_RS02125 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain RGna_RS02125 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain RGna_RS02150 PF00800 Prephenate dehydratase RGna_RS02150 PF01817 Chorismate mutase type II RGna_RS02150 PF01842 ACT domain RGna_RS02170 PF03755 YicC-like family, N-terminal region RGna_RS02170 PF08340 Domain of unknown function (DUF1732) RGna_RS02175 PF00625 Guanylate kinase RGna_RS02180 PF01192 RNA polymerase Rpb6 RGna_RS02185 PF04055 Radical SAM superfamily RGna_RS02185 PF18693 TRAM domain RGna_RS02185 PF00919 Uncharacterized protein family UPF0004 RGna_RS02190 PF01066 CDP-alcohol phosphatidyltransferase RGna_RS02195 PF02464 Competence-damaged protein RGna_RS02195 PF00994 Probable molybdopterin binding domain RGna_RS02195 PF18146 Damage-inducible protein CinA KH domain RGna_RS02210 PF02899 Phage integrase, N-terminal SAM-like domain RGna_RS02210 PF00589 Phage integrase family RGna_RS02215 PF01520 N-acetylmuramoyl-L-alanine amidase RGna_RS02345 PF13495 Phage integrase, N-terminal SAM-like domain RGna_RS02345 PF00589 Phage integrase family RGna_RS02355 PF00216 Bacterial DNA-binding protein RGna_RS02400 PF13361 UvrD-like helicase C-terminal domain RGna_RS02400 PF00580 UvrD/REP helicase N-terminal domain RGna_RS02415 PF11799 impB/mucB/samB family C-terminal domain RGna_RS02415 PF11798 IMS family HHH motif RGna_RS02415 PF00817 impB/mucB/samB family RGna_RS02545 PF00589 Phage integrase family RGna_RS02545 PF02899 Phage integrase, N-terminal SAM-like domain RGna_RS02555 PF12323 Helix-turn-helix domain RGna_RS02555 PF01385 Probable transposase RGna_RS02555 PF07282 Putative transposase DNA-binding domain RGna_RS02565 PF07804 HipA-like C-terminal domain RGna_RS02610 PF02452 PemK-like, MazF-like toxin of type II toxin-antitoxin system RGna_RS02645 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain RGna_RS02645 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain RGna_RS02655 PF00533 BRCA1 C Terminus (BRCT) domain RGna_RS02655 PF12826 Helix-hairpin-helix motif RGna_RS02655 PF01653 NAD-dependent DNA ligase adenylation domain RGna_RS02655 PF03120 NAD-dependent DNA ligase OB-fold domain RGna_RS02675 PF00625 Guanylate kinase RGna_RS02715 PF00692 dUTPase RGna_RS02740 PF00265 Thymidine kinase RGna_RS02745 PF00703 Glycosyl hydrolases family 2 RGna_RS02745 PF02837 Glycosyl hydrolases family 2, sugar binding domain RGna_RS02745 PF02836 Glycosyl hydrolases family 2, TIM barrel domain RGna_RS02745 PF02929 Beta galactosidase small chain RGna_RS02745 PF16353 Domain of unknown function(DUF4981) RGna_RS02755 PF01209 ubiE/COQ5 methyltransferase family RGna_RS02760 PF13538 UvrD-like helicase C-terminal domain RGna_RS02775 PF01048 Phosphorylase superfamily RGna_RS02780 PF04397 LytTr DNA-binding domain RGna_RS02780 PF00072 Response regulator receiver domain RGna_RS02790 PF10086 YhfC intramembrane metalloprotease RGna_RS02825 PF00488 MutS domain V RGna_RS02825 PF05190 MutS family domain IV RGna_RS02825 PF05192 MutS domain III RGna_RS02825 PF05188 MutS domain II RGna_RS02825 PF01624 MutS domain I RGna_RS02830 PF00860 Permease family RGna_RS02845 PF03169 OPT oligopeptide transporter protein RGna_RS02850 PF07687 Peptidase dimerisation domain RGna_RS02850 PF01546 Peptidase family M20/M25/M40 RGna_RS02865 PF02562 PhoH-like protein RGna_RS02870 PF02130 Uncharacterized protein family UPF0054 RGna_RS02875 PF01943 Polysaccharide biosynthesis protein RGna_RS02875 PF14667 Polysaccharide biosynthesis C-terminal domain RGna_RS02885 PF05979 Bacterial protein of unknown function (DUF896) RGna_RS02900 PF01497 Periplasmic binding protein RGna_RS02905 PF01032 FecCD transport family RGna_RS02910 PF00005 ABC transporter RGna_RS02915 PF00919 Uncharacterized protein family UPF0004 RGna_RS02915 PF01938 TRAM domain RGna_RS02915 PF04055 Radical SAM superfamily RGna_RS02925 PF05190 MutS family domain IV RGna_RS02925 PF05192 MutS domain III RGna_RS02925 PF00488 MutS domain V RGna_RS02925 PF01624 MutS domain I RGna_RS02925 PF05188 MutS domain II RGna_RS02930 PF01119 DNA mismatch repair protein, C-terminal domain RGna_RS02930 PF08676 MutL C terminal dimerisation domain RGna_RS02940 PF06838 Methionine gamma-lyase RGna_RS02955 PF04002 RadC-like JAB domain RGna_RS02975 PF03717 Penicillin-binding Protein dimerisation domain RGna_RS02975 PF03793 PASTA domain RGna_RS02975 PF00905 Penicillin binding protein transpeptidase domain RGna_RS02980 PF03775 Septum formation inhibitor MinC, C-terminal domain RGna_RS02985 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain RGna_RS02995 PF01098 Cell cycle protein RGna_RS03000 PF02142 MGS-like domain RGna_RS03005 PF00768 D-alanyl-D-alanine carboxypeptidase RGna_RS03005 PF07943 Penicillin-binding protein 5, C-terminal domain RGna_RS03010 PF04070 Domain of unknown function (DUF378) RGna_RS03020 PF01168 Alanine racemase, N-terminal domain RGna_RS03025 PF04472 Cell division protein SepF RGna_RS03030 PF00163 Ribosomal protein S4/S9 N-terminal domain RGna_RS03030 PF01479 S4 domain RGna_RS03040 PF00849 RNA pseudouridylate synthase RGna_RS03040 PF01479 S4 domain RGna_RS03045 PF01066 CDP-alcohol phosphatidyltransferase RGna_RS03050 PF00075 RNase H RGna_RS03065 PF01171 PP-loop family RGna_RS03075 PF00248 Aldo/keto reductase family RGna_RS03080 PF13495 Phage integrase, N-terminal SAM-like domain RGna_RS03080 PF00589 Phage integrase family RGna_RS03090 PF01476 LysM domain RGna_RS03095 PF00005 ABC transporter RGna_RS03095 PF00664 ABC transporter transmembrane region RGna_RS03100 PF00664 ABC transporter transmembrane region RGna_RS03100 PF00005 ABC transporter RGna_RS03105 PF00717 Peptidase S24-like RGna_RS03105 PF01726 LexA DNA binding domain RGna_RS03115 PF01966 HD domain RGna_RS03120 PF01467 Cytidylyltransferase-like RGna_RS03125 PF01985 CRS1 / YhbY (CRM) domain RGna_RS03130 PF01926 50S ribosome-binding GTPase RGna_RS03130 PF09269 Domain of unknown function (DUF1967) RGna_RS03130 PF01018 GTP1/OBG RGna_RS03135 PF01016 Ribosomal L27 protein RGna_RS03145 PF00829 Ribosomal prokaryotic L21 protein RGna_RS03150 PF00005 ABC transporter RGna_RS03150 PF00571 CBS domain RGna_RS03155 PF00696 Amino acid kinase family RGna_RS03155 PF13840 ACT domain RGna_RS03160 PF04073 Aminoacyl-tRNA editing domain RGna_RS03165 PF10150 Ribonuclease E/G family RGna_RS03195 PF01554 MatE RGna_RS03200 PF15975 Flotillin RGna_RS03200 PF01145 SPFH domain / Band 7 family RGna_RS03205 PF17853 GGDEF-like domain RGna_RS03205 PF05651 Putative sugar diacid recognition RGna_RS03205 PF13556 PucR C-terminal helix-turn-helix domain RGna_RS03210 PF02447 GntP family permease RGna_RS03215 PF02595 Glycerate kinase family RGna_RS03265 PF18106 Rolling Circle replication initiation protein N-terminal domain RGna_RS03265 PF02486 Replication initiation factor RGna_RS03315 PF00877 NlpC/P60 family RGna_RS03340 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RGna_RS03340 PF00512 His Kinase A (phospho-acceptor) domain RGna_RS03350 PF00005 ABC transporter RGna_RS03355 PF00486 Transcriptional regulatory protein, C terminal RGna_RS03355 PF00072 Response regulator receiver domain RGna_RS03375 PF09035 Excisionase from transposon Tn916 RGna_RS03380 PF00589 Phage integrase family RGna_RS03380 PF02920 DNA binding domain of tn916 integrase RGna_RS03390 PF02554 Carbon starvation protein CstA RGna_RS03395 PF00465 Iron-containing alcohol dehydrogenase RGna_RS03410 PF02378 Phosphotransferase system, EIIC RGna_RS03410 PF00367 phosphotransferase system, EIIB RGna_RS03410 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 RGna_RS03430 PF01381 Helix-turn-helix RGna_RS03435 PF06100 MCRA family RGna_RS03440 PF00440 Bacterial regulatory proteins, tetR family RGna_RS03445 PF01156 Inosine-uridine preferring nucleoside hydrolase RGna_RS03460 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) RGna_RS03460 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 RGna_RS03475 PF01502 Phosphoribosyl-AMP cyclohydrolase RGna_RS03475 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase RGna_RS03480 PF00475 Imidazoleglycerol-phosphate dehydratase RGna_RS03485 PF00815 Histidinol dehydrogenase RGna_RS03490 PF01634 ATP phosphoribosyltransferase RGna_RS03500 PF03838 Recombination protein U RGna_RS03505 PF00849 RNA pseudouridylate synthase RGna_RS03505 PF01479 S4 domain RGna_RS03520 PF04055 Radical SAM superfamily RGna_RS03520 PF11842 Domain of unknown function (DUF3362) RGna_RS03520 PF08497 Radical SAM N-terminal RGna_RS03525 PF13419 Haloacid dehalogenase-like hydrolase RGna_RS03530 PF01479 S4 domain RGna_RS03530 PF00849 RNA pseudouridylate synthase RGna_RS03535 PF01189 16S rRNA methyltransferase RsmB/F RGna_RS03535 PF17125 N-terminal domain of 16S rRNA methyltransferase RsmF RGna_RS03535 PF17126 RsmF rRNA methyltransferase first C-terminal domain RGna_RS03540 PF08460 Bacterial SH3 domain RGna_RS03540 PF01551 Peptidase family M23 RGna_RS03555 PF01467 Cytidylyltransferase-like RGna_RS03565 PF00269 Small, acid-soluble spore proteins, alpha/beta type RGna_RS03570 PF00270 DEAD/DEAH box helicase RGna_RS03570 PF17191 RecG wedge domain RGna_RS03570 PF00271 Helicase conserved C-terminal domain RGna_RS03575 PF02734 DAK2 domain RGna_RS03575 PF13684 Dihydroxyacetone kinase family RGna_RS03590 PF00830 Ribosomal L28 family RGna_RS03610 PF00905 Penicillin binding protein transpeptidase domain RGna_RS03615 PF01098 Cell cycle protein RGna_RS03620 PF01136 Peptidase family U32 RGna_RS03620 PF12392 Collagenase RGna_RS03630 PF05496 Holliday junction DNA helicase RuvB P-loop domain RGna_RS03630 PF17864 RuvB AAA lid domain RGna_RS03630 PF05491 RuvB C-terminal winged helix domain RGna_RS03635 PF01330 RuvA N terminal domain RGna_RS03635 PF07499 RuvA, C-terminal domain RGna_RS03650 PF13091 PLD-like domain RGna_RS03655 PF02424 ApbE family RGna_RS03720 PF06445 GyrI-like small molecule binding domain RGna_RS03720 PF13411 MerR HTH family regulatory protein RGna_RS03725 PF00037 4Fe-4S binding domain RGna_RS03725 PF13187 4Fe-4S dicluster domain RGna_RS03725 PF04060 Putative Fe-S cluster RGna_RS03730 PF02508 Rnf-Nqr subunit, membrane protein RGna_RS03735 PF02508 Rnf-Nqr subunit, membrane protein RGna_RS03745 PF03116 NQR2, RnfD, RnfE family RGna_RS03750 PF13375 RnfC Barrel sandwich hybrid domain RGna_RS03750 PF13237 4Fe-4S dicluster domain RGna_RS03750 PF10531 SLBB domain RGna_RS03750 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit RGna_RS03755 PF00575 S1 RNA binding domain RGna_RS03755 PF02401 LytB protein RGna_RS03760 PF02401 LytB protein RGna_RS03765 PF02224 Cytidylate kinase RGna_RS03775 PF01380 SIS domain RGna_RS03775 PF01418 Helix-turn-helix domain, rpiR family RGna_RS03780 PF01321 Creatinase/Prolidase N-terminal domain RGna_RS03780 PF00557 Metallopeptidase family M24 RGna_RS03785 PF00364 Biotin-requiring enzyme RGna_RS03785 PF00682 HMGL-like RGna_RS03785 PF02436 Conserved carboxylase domain RGna_RS03790 PF03977 Na+-transporting oxaloacetate decarboxylase beta subunit RGna_RS03805 PF01039 Carboxyl transferase domain RGna_RS03810 PF08502 LeuA allosteric (dimerisation) domain RGna_RS03810 PF00682 HMGL-like RGna_RS03815 PF07943 Penicillin-binding protein 5, C-terminal domain RGna_RS03815 PF00768 D-alanyl-D-alanine carboxypeptidase RGna_RS03820 PF04079 Segregation and condensation complex subunit ScpB RGna_RS03825 PF02616 Segregation and condensation protein ScpA RGna_RS03830 PF00149 Calcineurin-like phosphoesterase RGna_RS03835 PF00768 D-alanyl-D-alanine carboxypeptidase RGna_RS03835 PF07943 Penicillin-binding protein 5, C-terminal domain RGna_RS03850 PF00155 Aminotransferase class I and II RGna_RS03860 PF00684 DnaJ central domain RGna_RS03860 PF01556 DnaJ C terminal domain RGna_RS03860 PF00226 DnaJ domain RGna_RS03870 PF02920 DNA binding domain of tn916 integrase RGna_RS03870 PF00589 Phage integrase family RGna_RS03875 PF09035 Excisionase from transposon Tn916 RGna_RS03895 PF02899 Phage integrase, N-terminal SAM-like domain RGna_RS03895 PF00589 Phage integrase family RGna_RS03900 PF02899 Phage integrase, N-terminal SAM-like domain RGna_RS03900 PF00589 Phage integrase family RGna_RS03915 PF05872 Bacterial protein of unknown function (DUF853) RGna_RS03950 PF00293 NUDIX domain RGna_RS03955 PF08463 EcoEI R protein C-terminal RGna_RS03955 PF00271 Helicase conserved C-terminal domain RGna_RS03955 PF04851 Type III restriction enzyme, res subunit RGna_RS03955 PF13588 Type I restriction enzyme R protein N terminus (HSDR_N) RGna_RS03960 PF00005 ABC transporter RGna_RS03965 PF00528 Binding-protein-dependent transport system inner membrane component RGna_RS03970 PF00497 Bacterial extracellular solute-binding proteins, family 3 RGna_RS03975 PF00936 BMC domain RGna_RS03980 PF00936 BMC domain RGna_RS03985 PF10662 Ethanolamine utilisation - propanediol utilisation RGna_RS03995 PF08245 Mur ligase middle domain RGna_RS03995 PF08353 Domain of unknown function (DUF1727) RGna_RS04000 PF07685 CobB/CobQ-like glutamine amidotransferase domain RGna_RS04005 PF00690 Cation transporter/ATPase, N-terminus RGna_RS04005 PF00689 Cation transporting ATPase, C-terminus RGna_RS04010 PF03313 Serine dehydratase alpha chain RGna_RS04015 PF01842 ACT domain RGna_RS04015 PF03315 Serine dehydratase beta chain RGna_RS04030 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain RGna_RS04030 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase RGna_RS04035 PF01165 Ribosomal protein S21 RGna_RS04040 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain RGna_RS04040 PF01411 tRNA synthetases class II (A) RGna_RS04040 PF02272 DHHA1 domain RGna_RS04050 PF00809 Pterin binding enzyme RGna_RS04050 PF02574 Homocysteine S-methyltransferase RGna_RS04050 PF02965 Vitamin B12 dependent methionine synthase, activation domain RGna_RS04050 PF02310 B12 binding domain RGna_RS04050 PF02607 B12 binding domain RGna_RS04060 PF02219 Methylenetetrahydrofolate reductase RGna_RS04065 PF08323 Starch synthase catalytic domain RGna_RS04065 PF00534 Glycosyl transferases group 1 RGna_RS04070 PF00072 Response regulator receiver domain RGna_RS04070 PF08769 Sporulation initiation factor Spo0A C terminal RGna_RS04075 PF05580 SpoIVB peptidase S55 RGna_RS04075 PF17820 PDZ domain RGna_RS04080 PF02463 RecF/RecN/SMC N terminal domain RGna_RS04085 PF02863 Arginine repressor, C-terminal domain RGna_RS04085 PF01316 Arginine repressor, DNA binding domain RGna_RS04090 PF01513 ATP-NAD kinase RGna_RS04095 PF01479 S4 domain RGna_RS04095 PF01728 FtsJ-like methyltransferase RGna_RS04100 PF13292 1-deoxy-D-xylulose-5-phosphate synthase RGna_RS04100 PF02779 Transketolase, pyrimidine binding domain RGna_RS04100 PF02780 Transketolase, C-terminal domain RGna_RS04105 PF00348 Polyprenyl synthetase RGna_RS04110 PF02609 Exonuclease VII small subunit RGna_RS04115 PF13742 OB-fold nucleic acid binding domain RGna_RS04115 PF02601 Exonuclease VII, large subunit RGna_RS04120 PF01029 NusB family RGna_RS04125 PF03780 Asp23 family, cell envelope-related function RGna_RS04130 PF03144 Elongation factor Tu domain 2 RGna_RS04130 PF16658 Class II release factor RF3, C-terminal domain RGna_RS04130 PF00009 Elongation factor Tu GTP binding domain RGna_RS04155 PF06686 Stage III sporulation protein AC/AD protein family RGna_RS04180 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain RGna_RS04180 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain RGna_RS04190 PF00005 ABC transporter RGna_RS04195 PF00512 His Kinase A (phospho-acceptor) domain RGna_RS04195 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RGna_RS04200 PF00072 Response regulator receiver domain RGna_RS04200 PF00486 Transcriptional regulatory protein, C terminal RGna_RS04205 PF00113 Enolase, C-terminal TIM barrel domain RGna_RS04205 PF03952 Enolase, N-terminal domain RGna_RS04215 PF00005 ABC transporter RGna_RS04220 PF12704 MacB-like periplasmic core domain RGna_RS04220 PF02687 FtsX-like permease family RGna_RS04250 PF00724 NADH:flavin oxidoreductase / NADH oxidase family RGna_RS04250 PF07992 Pyridine nucleotide-disulphide oxidoreductase RGna_RS04255 PF02666 Phosphatidylserine decarboxylase RGna_RS04260 PF01066 CDP-alcohol phosphatidyltransferase RGna_RS04280 PF01138 3' exoribonuclease family, domain 1 RGna_RS04280 PF00013 KH domain RGna_RS04280 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain RGna_RS04280 PF03725 3' exoribonuclease family, domain 2 RGna_RS04280 PF00575 S1 RNA binding domain RGna_RS04285 PF00312 Ribosomal protein S15 RGna_RS04300 PF00528 Binding-protein-dependent transport system inner membrane component RGna_RS04305 PF00528 Binding-protein-dependent transport system inner membrane component RGna_RS04320 PF12833 Helix-turn-helix domain RGna_RS04320 PF00072 Response regulator receiver domain RGna_RS04325 PF00672 HAMP domain RGna_RS04325 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RGna_RS04325 PF06580 Histidine kinase RGna_RS04325 PF02743 Cache domain RGna_RS04330 PF01687 Riboflavin kinase RGna_RS04330 PF06574 FAD synthetase RGna_RS04335 PF01509 TruB family pseudouridylate synthase (N terminal domain) RGna_RS04335 PF16198 tRNA pseudouridylate synthase B C-terminal domain RGna_RS04340 PF02272 DHHA1 domain RGna_RS04340 PF01368 DHH family RGna_RS04345 PF02033 Ribosome-binding factor A RGna_RS04350 PF11987 Translation-initiation factor 2 RGna_RS04350 PF04760 Translation initiation factor IF-2, N-terminal region RGna_RS04350 PF11987 Translation-initiation factor 2 RGna_RS04350 PF04760 Translation initiation factor IF-2, N-terminal region RGna_RS04350 PF00009 Elongation factor Tu GTP binding domain RGna_RS04350 PF00009 Elongation factor Tu GTP binding domain RGna_RS04355 PF01248 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family RGna_RS04360 PF04296 Protein of unknown function (DUF448) RGna_RS04365 PF13184 NusA-like KH domain RGna_RS04365 PF00575 S1 RNA binding domain RGna_RS04365 PF08529 NusA N-terminal domain RGna_RS04370 PF02576 RimP N-terminal domain RGna_RS04370 PF17384 RimP C-terminal SH3 domain RGna_RS04375 PF00521 DNA gyrase/topoisomerase IV, subunit A RGna_RS04375 PF03989 DNA gyrase C-terminal domain, beta-propeller RGna_RS04380 PF01751 Toprim domain RGna_RS04380 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RGna_RS04380 PF00986 DNA gyrase B subunit, carboxyl terminus RGna_RS04380 PF00204 DNA gyrase B RGna_RS04390 PF03418 Germination protease RGna_RS04395 PF01649 Ribosomal protein S20 RGna_RS04405 PF00874 PRD domain RGna_RS04405 PF03123 CAT RNA binding domain RGna_RS04410 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 RGna_RS04410 PF00367 phosphotransferase system, EIIB RGna_RS04410 PF02378 Phosphotransferase system, EIIC RGna_RS04415 PF01554 MatE RGna_RS04420 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain RGna_RS04420 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain RGna_RS04425 PF10369 Small subunit of acetolactate synthase RGna_RS04435 PF00753 Metallo-beta-lactamase superfamily RGna_RS04445 PF16363 GDP-mannose 4,6 dehydratase RGna_RS04460 PF12848 ABC transporter RGna_RS04460 PF16326 ABC transporter C-terminal domain RGna_RS04460 PF00005 ABC transporter RGna_RS04465 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RGna_RS04465 PF00512 His Kinase A (phospho-acceptor) domain RGna_RS04465 PF13493 Domain of unknown function (DUF4118) RGna_RS04465 PF02702 Osmosensitive K+ channel His kinase sensor domain RGna_RS04470 PF02669 K+-transporting ATPase, c chain RGna_RS04480 PF03814 Potassium-transporting ATPase A subunit RGna_RS04515 PF00486 Transcriptional regulatory protein, C terminal RGna_RS04515 PF00072 Response regulator receiver domain RGna_RS04520 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RGna_RS04520 PF00512 His Kinase A (phospho-acceptor) domain RGna_RS04520 PF13493 Domain of unknown function (DUF4118) RGna_RS04520 PF02702 Osmosensitive K+ channel His kinase sensor domain RGna_RS04525 PF03786 D-mannonate dehydratase (UxuA) RGna_RS04540 PF05378 Hydantoinase/oxoprolinase N-terminal region RGna_RS04540 PF01968 Hydantoinase/oxoprolinase RGna_RS04550 PF02615 Malate/L-lactate dehydrogenase RGna_RS04555 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family RGna_RS04555 PF00356 Bacterial regulatory proteins, lacI family RGna_RS04560 PF00005 ABC transporter RGna_RS04575 PF00392 Bacterial regulatory proteins, gntR family RGna_RS04580 PF00005 ABC transporter RGna_RS04590 PF07943 Penicillin-binding protein 5, C-terminal domain RGna_RS04590 PF00768 D-alanyl-D-alanine carboxypeptidase RGna_RS04600 PF00440 Bacterial regulatory proteins, tetR family RGna_RS04605 PF02645 Uncharacterised protein, DegV family COG1307 RGna_RS04630 PF02447 GntP family permease RGna_RS04660 PF01272 Transcription elongation factor, GreA/GreB, C-term RGna_RS04660 PF03449 Transcription elongation factor, N-terminal RGna_RS04665 PF01676 Metalloenzyme superfamily RGna_RS04665 PF06415 BPG-independent PGAM N-terminus (iPGM_N) RGna_RS04675 PF00690 Cation transporter/ATPase, N-terminus RGna_RS04675 PF00689 Cation transporting ATPase, C-terminus RGna_RS04680 PF00072 Response regulator receiver domain RGna_RS04680 PF00486 Transcriptional regulatory protein, C terminal RGna_RS04685 PF00689 Cation transporting ATPase, C-terminus RGna_RS04685 PF00690 Cation transporter/ATPase, N-terminus RGna_RS04690 PF00121 Triosephosphate isomerase RGna_RS04695 PF00162 Phosphoglycerate kinase RGna_RS04700 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain RGna_RS04700 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain RGna_RS04715 PF01592 NifU-like N terminal domain RGna_RS04720 PF00266 Aminotransferase class-V RGna_RS04725 PF02082 Transcriptional regulator RGna_RS04740 PF00293 NUDIX domain RGna_RS04745 PF00013 KH domain RGna_RS04745 PF01966 HD domain RGna_RS04745 PF12072 Domain of unknown function (DUF3552) RGna_RS04750 PF02631 RecX family RGna_RS04760 PF00232 Glycosyl hydrolase family 1 RGna_RS04785 PF02142 MGS-like domain RGna_RS04795 PF00005 ABC transporter RGna_RS04800 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase RGna_RS04800 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase RGna_RS04805 PF12804 MobA-like NTP transferase domain RGna_RS04805 PF00132 Bacterial transferase hexapeptide (six repeats) RGna_RS04805 PF14602 Hexapeptide repeat of succinyl-transferase RGna_RS04810 PF01131 DNA topoisomerase RGna_RS04810 PF01751 Toprim domain RGna_RS04815 PF17941 Polyphosphate kinase C-terminal domain 1 RGna_RS04815 PF13090 Polyphosphate kinase C-terminal domain 2 RGna_RS04815 PF02503 Polyphosphate kinase middle domain RGna_RS04815 PF13089 Polyphosphate kinase N-terminal domain RGna_RS04825 PF00005 ABC transporter RGna_RS04825 PF12848 ABC transporter RGna_RS04830 PF00300 Histidine phosphatase superfamily (branch 1) RGna_RS04835 PF02664 S-Ribosylhomocysteinase (LuxS) RGna_RS04850 PF18390 Glycogen debranching enzyme C-terminal domain RGna_RS04850 PF00128 Alpha amylase, catalytic domain RGna_RS04850 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) RGna_RS04855 PF13407 Periplasmic binding protein domain RGna_RS04860 PF06949 Protein of unknown function (DUF1292) RGna_RS04865 PF00580 UvrD/REP helicase N-terminal domain RGna_RS04865 PF13361 UvrD-like helicase C-terminal domain RGna_RS04870 PF00749 tRNA synthetases class I (E and Q), catalytic domain RGna_RS04880 PF06738 Putative threonine/serine exporter RGna_RS04895 PF00156 Phosphoribosyl transferase domain RGna_RS04900 PF01259 SAICAR synthetase RGna_RS04910 PF00294 pfkB family carbohydrate kinase RGna_RS04915 PF08220 DeoR-like helix-turn-helix domain RGna_RS04915 PF00455 DeoR C terminal sensor domain RGna_RS04935 PF00155 Aminotransferase class I and II RGna_RS04955 PF17863 AAA lid domain RGna_RS04955 PF07726 ATPase family associated with various cellular activities (AAA) RGna_RS04965 PF03109 ABC1 family RGna_RS04975 PF17757 UvrB interaction domain RGna_RS04975 PF00270 DEAD/DEAH box helicase RGna_RS04975 PF03461 TRCF domain RGna_RS04975 PF00271 Helicase conserved C-terminal domain RGna_RS04975 PF02559 CarD-like/TRCF domain RGna_RS04980 PF01195 Peptidyl-tRNA hydrolase RGna_RS04995 PF13419 Haloacid dehalogenase-like hydrolase RGna_RS05000 PF04539 Sigma-70 region 3 RGna_RS05000 PF04545 Sigma-70, region 4 RGna_RS05000 PF04542 Sigma-70 region 2 RGna_RS05010 PF04542 Sigma-70 region 2 RGna_RS05010 PF04545 Sigma-70, region 4 RGna_RS05015 PF03419 Sporulation factor SpoIIGA RGna_RS05020 PF12327 FtsZ family, C-terminal domain RGna_RS05020 PF00091 Tubulin/FtsZ family, GTPase domain RGna_RS05030 PF01098 Cell cycle protein RGna_RS05035 PF08245 Mur ligase middle domain RGna_RS05035 PF02875 Mur ligase family, glutamate ligase domain RGna_RS05045 PF00905 Penicillin binding protein transpeptidase domain RGna_RS05045 PF03717 Penicillin-binding Protein dimerisation domain RGna_RS05045 PF03793 PASTA domain RGna_RS05050 PF03717 Penicillin-binding Protein dimerisation domain RGna_RS05050 PF00905 Penicillin binding protein transpeptidase domain RGna_RS05050 PF03793 PASTA domain RGna_RS05060 PF01795 MraW methylase family RGna_RS05065 PF02381 MraZ protein, putative antitoxin-like RGna_RS05075 PF02645 Uncharacterised protein, DegV family COG1307 RGna_RS05080 PF01098 Cell cycle protein RGna_RS05085 PF13537 Glutamine amidotransferase domain RGna_RS05085 PF00733 Asparagine synthase RGna_RS05110 PF06125 Bacterial protein of unknown function (DUF961) RGna_RS05140 PF18106 Rolling Circle replication initiation protein N-terminal domain RGna_RS05140 PF02486 Replication initiation factor RGna_RS05225 PF00005 ABC transporter RGna_RS05225 PF12848 ABC transporter RGna_RS05275 PF00990 Diguanylate cyclase, GGDEF domain RGna_RS05275 PF00072 Response regulator receiver domain RGna_RS05290 PF00512 His Kinase A (phospho-acceptor) domain RGna_RS05290 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RGna_RS05300 PF00005 ABC transporter RGna_RS05305 PF00072 Response regulator receiver domain RGna_RS05305 PF00486 Transcriptional regulatory protein, C terminal RGna_RS05320 PF08241 Methyltransferase domain RGna_RS05350 PF00133 tRNA synthetases class I (I, L, M and V) RGna_RS05350 PF09334 tRNA synthetases class I (M) RGna_RS05350 PF13603 Leucyl-tRNA synthetase, Domain 2 RGna_RS05350 PF08264 Anticodon-binding domain of tRNA RGna_RS05355 PF01235 Sodium:alanine symporter family RGna_RS05360 PF02535 ZIP Zinc transporter RGna_RS05365 PF00258 Flavodoxin RGna_RS05385 PF02386 Cation transport protein RGna_RS05390 PF02080 TrkA-C domain RGna_RS05390 PF02254 TrkA-N domain RGna_RS05395 PF00679 Elongation factor G C-terminus RGna_RS05395 PF03144 Elongation factor Tu domain 2 RGna_RS05395 PF14492 Elongation Factor G, domain II RGna_RS05395 PF03764 Elongation factor G, domain IV RGna_RS05395 PF00009 Elongation factor Tu GTP binding domain RGna_RS05400 PF01842 ACT domain RGna_RS05400 PF02153 Prephenate dehydrogenase RGna_RS05405 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) RGna_RS05410 PF07702 UTRA domain RGna_RS05410 PF00392 Bacterial regulatory proteins, gntR family RGna_RS05415 PF00860 Permease family RGna_RS05425 PF00403 Heavy-metal-associated domain RGna_RS05430 PF02583 Metal-sensitive transcriptional repressor RGna_RS05440 PF02554 Carbon starvation protein CstA RGna_RS05450 PF07859 alpha/beta hydrolase fold RGna_RS05455 PF00465 Iron-containing alcohol dehydrogenase RGna_RS05470 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases RGna_RS05470 PF10414 Sirohaem synthase dimerisation region RGna_RS05470 PF14824 Sirohaem biosynthesis protein central RGna_RS05475 PF02570 Precorrin-8X methylmutase RGna_RS05480 PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase RGna_RS05490 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle RGna_RS05495 PF08352 Oligopeptide/dipeptide transporter, C-terminal region RGna_RS05495 PF00005 ABC transporter RGna_RS05500 PF12911 N-terminal TM domain of oligopeptide transport permease C RGna_RS05500 PF00528 Binding-protein-dependent transport system inner membrane component RGna_RS05505 PF00528 Binding-protein-dependent transport system inner membrane component RGna_RS05525 PF00155 Aminotransferase class I and II RGna_RS05530 PF03186 CobD/Cbib protein RGna_RS05535 PF00300 Histidine phosphatase superfamily (branch 1) RGna_RS05540 PF02654 Cobalamin-5-phosphate synthase RGna_RS05545 PF02277 Phosphoribosyltransferase RGna_RS05550 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain RGna_RS05550 PF07685 CobB/CobQ-like glutamine amidotransferase domain RGna_RS05555 PF05175 Methyltransferase small domain RGna_RS05560 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases RGna_RS05565 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases RGna_RS05570 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases RGna_RS05580 PF06180 Cobalt chelatase (CbiK) RGna_RS05585 PF00005 ABC transporter RGna_RS05590 PF02361 Cobalt transport protein RGna_RS05600 PF01891 Cobalt uptake substrate-specific transmembrane region RGna_RS05605 PF12557 Cob(I)alamin adenosyltransferase N terminal RGna_RS05605 PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP RGna_RS05610 PF02571 Precorrin-6x reductase CbiJ/CobK RGna_RS05615 PF11760 Cobalamin synthesis G N-terminal RGna_RS05615 PF01890 Cobalamin synthesis G C-terminus RGna_RS05615 PF11761 Cobalamin biosynthesis central region RGna_RS05620 PF00909 Ammonium Transporter Family RGna_RS05625 PF00543 Nitrogen regulatory protein P-II RGna_RS05630 PF01476 LysM domain RGna_RS05630 PF00704 Glycosyl hydrolases family 18 RGna_RS05640 PF03147 Ferredoxin-fold anticodon binding domain RGna_RS05640 PF03483 B3/4 domain RGna_RS05640 PF01588 Putative tRNA binding domain RGna_RS05640 PF03484 tRNA synthetase B5 domain RGna_RS05640 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain RGna_RS05645 PF01409 tRNA synthetases class II core domain (F) RGna_RS05645 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain RGna_RS05650 PF03631 Virulence factor BrkB RGna_RS05670 PF14821 Threonine synthase N terminus RGna_RS05670 PF00291 Pyridoxal-phosphate dependent enzyme RGna_RS05680 PF00694 Aconitase C-terminal domain RGna_RS05690 PF02774 Semialdehyde dehydrogenase, dimerisation domain RGna_RS05690 PF01118 Semialdehyde dehydrogenase, NAD binding domain RGna_RS05695 PF00206 Lyase RGna_RS05695 PF14698 Argininosuccinate lyase C-terminal RGna_RS05700 PF02677 Epoxyqueuosine reductase QueH RGna_RS05705 PF00005 ABC transporter RGna_RS05710 PF00528 Binding-protein-dependent transport system inner membrane component RGna_RS05715 PF00209 Sodium:neurotransmitter symporter family RGna_RS05720 PF00440 Bacterial regulatory proteins, tetR family RGna_RS05725 PF01554 MatE RGna_RS05735 PF00480 ROK family RGna_RS05740 PF07475 HPr Serine kinase C-terminal domain RGna_RS05740 PF02603 HPr Serine kinase N terminus RGna_RS05745 PF01541 GIY-YIG catalytic domain RGna_RS05745 PF12826 Helix-hairpin-helix motif RGna_RS05745 PF02151 UvrB/uvrC motif RGna_RS05745 PF08459 UvrC Helix-hairpin-helix N-terminal RGna_RS05750 PF06480 FtsH Extracellular RGna_RS05750 PF17862 AAA+ lid domain RGna_RS05750 PF00004 ATPase family associated with various cellular activities (AAA) RGna_RS05750 PF01434 Peptidase family M41 RGna_RS05755 PF08903 Domain of unknown function (DUF1846) RGna_RS05765 PF01569 PAP2 superfamily RGna_RS05770 PF01207 Dihydrouridine synthase (Dus) RGna_RS05775 PF01061 ABC-2 type transporter RGna_RS05780 PF01061 ABC-2 type transporter RGna_RS05785 PF01554 MatE RGna_RS05790 PF00664 ABC transporter transmembrane region RGna_RS05790 PF00005 ABC transporter RGna_RS05795 PF02915 Rubrerythrin RGna_RS05805 PF01063 Amino-transferase class IV RGna_RS05810 PF10369 Small subunit of acetolactate synthase RGna_RS05815 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain RGna_RS05815 PF00205 Thiamine pyrophosphate enzyme, central domain RGna_RS05815 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain RGna_RS05820 PF00950 ABC 3 transport family RGna_RS05825 PF00005 ABC transporter RGna_RS05830 PF01297 Zinc-uptake complex component A periplasmic RGna_RS05835 PF00186 Dihydrofolate reductase RGna_RS05840 PF00303 Thymidylate synthase RGna_RS05845 PF00742 Homoserine dehydrogenase RGna_RS05845 PF03447 Homoserine dehydrogenase, NAD binding domain RGna_RS05845 PF01842 ACT domain RGna_RS05860 PF01336 OB-fold nucleic acid binding domain RGna_RS05860 PF02938 GAD domain RGna_RS05860 PF00152 tRNA synthetases class II (D, K and N) RGna_RS05865 PF13393 Histidyl-tRNA synthetase RGna_RS05870 PF04055 Radical SAM superfamily RGna_RS05875 PF00753 Metallo-beta-lactamase superfamily RGna_RS05880 PF02824 TGS domain RGna_RS05880 PF13291 ACT domain RGna_RS05880 PF04607 Region found in RelA / SpoT proteins RGna_RS05885 PF17768 RecJ OB domain RGna_RS05885 PF01368 DHH family RGna_RS05885 PF02272 DHHA1 domain RGna_RS05895 PF07549 SecD/SecF GG Motif RGna_RS05895 PF02355 Protein export membrane protein RGna_RS05900 PF06463 Molybdenum Cofactor Synthesis C RGna_RS05900 PF04055 Radical SAM superfamily RGna_RS05910 PF15714 Stage V sporulation protein T C-terminal, transcription factor RGna_RS05910 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin RGna_RS05920 PF02690 Na+/Pi-cotransporter RGna_RS05930 PF04101 Glycosyltransferase family 28 C-terminal domain RGna_RS05930 PF06925 Monogalactosyldiacylglycerol (MGDG) synthase RGna_RS05935 PF02660 Glycerol-3-phosphate acyltransferase RGna_RS05950 PF13411 MerR HTH family regulatory protein RGna_RS05950 PF06445 GyrI-like small molecule binding domain RGna_RS05960 PF01865 Protein of unknown function DUF47 RGna_RS05965 PF01384 Phosphate transporter family RGna_RS05970 PF02254 TrkA-N domain RGna_RS05970 PF02080 TrkA-C domain RGna_RS05975 PF02386 Cation transport protein RGna_RS05980 PF02355 Protein export membrane protein RGna_RS05980 PF07549 SecD/SecF GG Motif RGna_RS05990 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD RGna_RS05995 PF00391 PEP-utilising enzyme, mobile domain RGna_RS05995 PF02896 PEP-utilising enzyme, TIM barrel domain RGna_RS05995 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain RGna_RS06000 PF02127 Aminopeptidase I zinc metalloprotease (M18) RGna_RS06010 PF01979 Amidohydrolase family RGna_RS06010 PF13382 Adenine deaminase C-terminal domain RGna_RS06015 PF13382 Adenine deaminase C-terminal domain RGna_RS06015 PF01979 Amidohydrolase family RGna_RS06020 PF03129 Anticodon binding domain RGna_RS06020 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) RGna_RS06025 PF11967 Recombination protein O N terminal RGna_RS06025 PF02565 Recombination protein O C terminal RGna_RS06035 PF07650 KH domain RGna_RS06035 PF01926 50S ribosome-binding GTPase RGna_RS06040 PF05193 Peptidase M16 inactive domain RGna_RS06040 PF00675 Insulinase (Peptidase family M16) RGna_RS06040 PF08367 Peptidase M16C associated RGna_RS06050 PF07992 Pyridine nucleotide-disulphide oxidoreductase RGna_RS06050 PF04324 BFD-like [2Fe-2S] binding domain RGna_RS06055 PF01266 FAD dependent oxidoreductase RGna_RS06060 PF02903 Alpha amylase, N-terminal ig-like domain RGna_RS06060 PF16657 Maltogenic Amylase, C-terminal domain RGna_RS06060 PF00128 Alpha amylase, catalytic domain RGna_RS06070 PF00528 Binding-protein-dependent transport system inner membrane component RGna_RS06075 PF00528 Binding-protein-dependent transport system inner membrane component RGna_RS06080 PF00356 Bacterial regulatory proteins, lacI family RGna_RS06085 PF02782 FGGY family of carbohydrate kinases, C-terminal domain RGna_RS06085 PF00370 FGGY family of carbohydrate kinases, N-terminal domain RGna_RS06090 PF04309 Glycerol-3-phosphate responsive antiterminator RGna_RS06095 PF01915 Glycosyl hydrolase family 3 C-terminal domain RGna_RS06095 PF00933 Glycosyl hydrolase family 3 N terminal domain RGna_RS06095 PF14310 Fibronectin type III-like domain RGna_RS06105 PF04397 LytTr DNA-binding domain RGna_RS06105 PF00072 Response regulator receiver domain RGna_RS06125 PF10371 Domain of unknown function RGna_RS06125 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II RGna_RS06125 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain RGna_RS06125 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg RGna_RS06125 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase RGna_RS06140 PF00005 ABC transporter RGna_RS06140 PF08352 Oligopeptide/dipeptide transporter, C-terminal region RGna_RS06145 PF00005 ABC transporter RGna_RS06145 PF08352 Oligopeptide/dipeptide transporter, C-terminal region RGna_RS06165 PF00528 Binding-protein-dependent transport system inner membrane component RGna_RS06180 PF01790 Prolipoprotein diacylglyceryl transferase RGna_RS06185 PF06071 Protein of unknown function (DUF933) RGna_RS06185 PF01926 50S ribosome-binding GTPase RGna_RS06190 PF14659 Phage integrase, N-terminal SAM-like domain RGna_RS06190 PF00589 Phage integrase family RGna_RS06200 PF01695 IstB-like ATP binding protein RGna_RS06215 PF12704 MacB-like periplasmic core domain RGna_RS06215 PF02687 FtsX-like permease family RGna_RS06215 PF00005 ABC transporter RGna_RS06220 PF00512 His Kinase A (phospho-acceptor) domain RGna_RS06220 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RGna_RS06220 PF00672 HAMP domain RGna_RS06225 PF00072 Response regulator receiver domain RGna_RS06225 PF00486 Transcriptional regulatory protein, C terminal RGna_RS06240 PF00834 Ribulose-phosphate 3 epimerase family RGna_RS06245 PF16745 RsgA N-terminal domain RGna_RS06245 PF03193 RsgA GTPase RGna_RS06250 PF03793 PASTA domain RGna_RS06250 PF00069 Protein kinase domain RGna_RS06260 PF04055 Radical SAM superfamily RGna_RS06265 PF01029 NusB family RGna_RS06265 PF01189 16S rRNA methyltransferase RsmB/F RGna_RS06270 PF04298 Putative neutral zinc metallopeptidase RGna_RS06275 PF02911 Formyl transferase, C-terminal domain RGna_RS06275 PF00551 Formyl transferase RGna_RS06280 PF01327 Polypeptide deformylase RGna_RS06285 PF18074 Primosomal protein N C-terminal domain RGna_RS06285 PF00271 Helicase conserved C-terminal domain RGna_RS06285 PF17764 3′ DNA-binding domain (3′BD) RGna_RS06285 PF04851 Type III restriction enzyme, res subunit RGna_RS06285 PF18319 PriA DNA helicase Cys-rich region (CRR) domain RGna_RS06290 PF01225 Mur ligase family, catalytic domain RGna_RS06290 PF08245 Mur ligase middle domain RGna_RS06290 PF02875 Mur ligase family, glutamate ligase domain RGna_RS06295 PF13855 Leucine rich repeat RGna_RS06295 PF08191 LRR adjacent RGna_RS06295 PF12354 Bacterial adhesion/invasion protein N terminal RGna_RS06295 PF13457 GW (Gly-Tryp) dipeptide domain RGna_RS06295 PF09479 Listeria-Bacteroides repeat domain (List_Bact_rpt) RGna_RS06295 PF12799 Leucine Rich repeats (2 copies) RGna_RS06300 PF00924 Mechanosensitive ion channel RGna_RS06300 PF05552 Conserved TM helix RGna_RS06310 PF02021 Uncharacterised protein family UPF0102 RGna_RS06315 PF01351 Ribonuclease HII RGna_RS06320 PF10502 Signal peptidase, peptidase S26 RGna_RS06325 PF01926 50S ribosome-binding GTPase RGna_RS06330 PF10502 Signal peptidase, peptidase S26 RGna_RS06335 PF01245 Ribosomal protein L19 RGna_RS06340 PF01746 tRNA (Guanine-1)-methyltransferase RGna_RS06345 PF05239 PRC-barrel domain RGna_RS06345 PF01782 RimM N-terminal domain RGna_RS06355 PF00886 Ribosomal protein S16 RGna_RS06360 PF02978 Signal peptide binding domain RGna_RS06360 PF02881 SRP54-type protein, helical bundle domain RGna_RS06360 PF00448 SRP54-type protein, GTPase domain RGna_RS06365 PF04297 Putative helix-turn-helix protein, YlxM / p13 like RGna_RS06370 PF00082 Subtilase family RGna_RS06615 PF01416 tRNA pseudouridine synthase RGna_RS06645 PF02288 Dehydratase medium subunit RGna_RS06650 PF08841 Diol dehydratase reactivase ATPase-like domain RGna_RS06650 PF18427 DD-reactivating factor swiveling domain RGna_RS06655 PF02287 Dehydratase small subunit RGna_RS06660 PF02288 Dehydratase medium subunit RGna_RS06665 PF02286 Dehydratase large subunit RGna_RS06680 PF03553 Na+/H+ antiporter family RGna_RS06685 PF08543 Phosphomethylpyrimidine kinase RGna_RS06685 PF02581 Thiamine monophosphate synthase RGna_RS06695 PF02581 Thiamine monophosphate synthase RGna_RS06700 PF02110 Hydroxyethylthiazole kinase family RGna_RS06705 PF13537 Glutamine amidotransferase domain RGna_RS06705 PF00733 Asparagine synthase RGna_RS06710 PF02441 Flavoprotein RGna_RS06720 PF01408 Oxidoreductase family, NAD-binding Rossmann fold RGna_RS06720 PF02894 Oxidoreductase family, C-terminal alpha/beta domain RGna_RS06725 PF02417 Chromate transporter RGna_RS06730 PF02417 Chromate transporter RGna_RS06735 PF08244 Glycosyl hydrolases family 32 C terminal RGna_RS06735 PF00251 Glycosyl hydrolases family 32 N-terminal domain RGna_RS06745 PF00528 Binding-protein-dependent transport system inner membrane component RGna_RS06750 PF00528 Binding-protein-dependent transport system inner membrane component RGna_RS06755 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family RGna_RS06755 PF00356 Bacterial regulatory proteins, lacI family RGna_RS06760 PF00990 Diguanylate cyclase, GGDEF domain RGna_RS06760 PF17151 Periplasmic sensor domain RGna_RS06770 PF12833 Helix-turn-helix domain RGna_RS06770 PF02805 Metal binding domain of Ada RGna_RS06775 PF09508 Lacto-N-biose phosphorylase N-terminal TIM barrel domain RGna_RS06775 PF17386 Lacto-N-biose phosphorylase C-terminal domain RGna_RS06775 PF17385 Lacto-N-biose phosphorylase central domain RGna_RS06780 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RGna_RS06785 PF00072 Response regulator receiver domain RGna_RS06785 PF00486 Transcriptional regulatory protein, C terminal RGna_RS06790 PF03551 Transcriptional regulator PadR-like family RGna_RS06805 PF03437 BtpA family RGna_RS06815 PF00294 pfkB family carbohydrate kinase RGna_RS06825 PF01261 Xylose isomerase-like TIM barrel RGna_RS06835 PF00701 Dihydrodipicolinate synthetase family RGna_RS06845 PF00480 ROK family RGna_RS06845 PF01047 MarR family RGna_RS06855 PF00294 pfkB family carbohydrate kinase RGna_RS06860 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase RGna_RS06875 PF13520 Amino acid permease RGna_RS06880 PF00370 FGGY family of carbohydrate kinases, N-terminal domain RGna_RS06880 PF02782 FGGY family of carbohydrate kinases, C-terminal domain RGna_RS06890 PF00392 Bacterial regulatory proteins, gntR family RGna_RS06890 PF07702 UTRA domain RGna_RS06895 PF01554 MatE RGna_RS06900 PF01261 Xylose isomerase-like TIM barrel RGna_RS06905 PF01261 Xylose isomerase-like TIM barrel RGna_RS06915 PF03553 Na+/H+ antiporter family RGna_RS06920 PF12848 ABC transporter RGna_RS06920 PF00005 ABC transporter RGna_RS06925 PF03960 ArsC family RGna_RS06930 PF00512 His Kinase A (phospho-acceptor) domain RGna_RS06930 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RGna_RS06935 PF00486 Transcriptional regulatory protein, C terminal RGna_RS06935 PF00072 Response regulator receiver domain RGna_RS06950 PF00005 ABC transporter RGna_RS06955 PF00753 Metallo-beta-lactamase superfamily RGna_RS06955 PF00301 Rubredoxin RGna_RS06955 PF00258 Flavodoxin RGna_RS06975 PF02687 FtsX-like permease family RGna_RS07160 PF00436 Single-strand binding protein family RGna_RS07185 PF02195 ParB-like nuclease domain RGna_RS07185 PF17762 HTH domain found in ParB protein RGna_RS07200 PF13614 AAA domain RGna_RS07320 PF11799 impB/mucB/samB family C-terminal domain RGna_RS07320 PF00817 impB/mucB/samB family RGna_RS07325 PF10431 C-terminal, D2-small domain, of ClpB protein RGna_RS07325 PF02861 Clp amino terminal domain, pathogenicity island component RGna_RS07325 PF17871 AAA lid domain RGna_RS07325 PF07724 AAA domain (Cdc48 subfamily) RGna_RS07325 PF00004 ATPase family associated with various cellular activities (AAA) RGna_RS07335 PF00440 Bacterial regulatory proteins, tetR family RGna_RS07335 PF17925 Tetracyclin repressor-like, C-terminal domain RGna_RS07340 PF01546 Peptidase family M20/M25/M40 RGna_RS07340 PF07687 Peptidase dimerisation domain RGna_RS07345 PF01814 Hemerythrin HHE cation binding domain RGna_RS07350 PF00293 NUDIX domain RGna_RS07350 PF09297 NADH pyrophosphatase zinc ribbon domain RGna_RS07355 PF01252 Signal peptidase (SPase) II RGna_RS07370 PF00999 Sodium/hydrogen exchanger family RGna_RS07375 PF06689 ClpX C4-type zinc finger RGna_RS07375 PF07724 AAA domain (Cdc48 subfamily) RGna_RS07375 PF10431 C-terminal, D2-small domain, of ClpB protein RGna_RS07385 PF00849 RNA pseudouridylate synthase RGna_RS07385 PF01479 S4 domain RGna_RS07395 PF03062 MBOAT, membrane-bound O-acyltransferase family RGna_RS07410 PF04607 Region found in RelA / SpoT proteins RGna_RS07425 PF00183 Hsp90 protein RGna_RS07440 PF13180 PDZ domain RGna_RS07440 PF03572 Peptidase family S41 RGna_RS07445 PF10145 Phage-related minor tail protein RGna_RS07445 PF01551 Peptidase family M23 RGna_RS07445 PF01464 Transglycosylase SLT domain RGna_RS07450 PF02687 FtsX-like permease family RGna_RS07450 PF18075 FtsX extracellular domain RGna_RS07455 PF00005 ABC transporter RGna_RS07460 PF13556 PucR C-terminal helix-turn-helix domain RGna_RS07460 PF17853 GGDEF-like domain RGna_RS07460 PF05651 Putative sugar diacid recognition RGna_RS07505 PF13361 UvrD-like helicase C-terminal domain RGna_RS07505 PF12705 PD-(D/E)XK nuclease superfamily RGna_RS07505 PF00580 UvrD/REP helicase N-terminal domain RGna_RS07510 PF12705 PD-(D/E)XK nuclease superfamily RGna_RS07525 PF07859 alpha/beta hydrolase fold RGna_RS07525 PF13472 GDSL-like Lipase/Acylhydrolase family RGna_RS07530 PF00248 Aldo/keto reductase family RGna_RS07535 PF03466 LysR substrate binding domain RGna_RS07535 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RGna_RS07540 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RGna_RS07540 PF03466 LysR substrate binding domain RGna_RS07555 PF13673 Acetyltransferase (GNAT) domain RGna_RS07560 PF00085 Thioredoxin RGna_RS07570 PF03717 Penicillin-binding Protein dimerisation domain RGna_RS07570 PF05223 NTF2-like N-terminal transpeptidase domain RGna_RS07570 PF00905 Penicillin binding protein transpeptidase domain RGna_RS07585 PF00596 Class II Aldolase and Adducin N-terminal domain RGna_RS07595 PF01261 Xylose isomerase-like TIM barrel RGna_RS07600 PF00455 DeoR C terminal sensor domain RGna_RS07600 PF08220 DeoR-like helix-turn-helix domain RGna_RS07610 PF03611 PTS system sugar-specific permease component RGna_RS07615 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 RGna_RS07625 PF00962 Adenosine/AMP deaminase RGna_RS07630 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region RGna_RS07635 PF01048 Phosphorylase superfamily RGna_RS07640 PF13545 Crp-like helix-turn-helix domain RGna_RS07640 PF00027 Cyclic nucleotide-binding domain RGna_RS07650 PF01791 DeoC/LacD family aldolase RGna_RS07655 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain RGna_RS07655 PF00591 Glycosyl transferase family, a/b domain RGna_RS07655 PF02885 Glycosyl transferase family, helical bundle domain RGna_RS07675 PF01676 Metalloenzyme superfamily RGna_RS07680 PF02843 Phosphoribosylglycinamide synthetase, C domain RGna_RS07680 PF02844 Phosphoribosylglycinamide synthetase, N domain RGna_RS07680 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain RGna_RS07685 PF00551 Formyl transferase RGna_RS07690 PF02769 AIR synthase related protein, C-terminal domain RGna_RS07690 PF00586 AIR synthase related protein, N-terminal domain RGna_RS07695 PF00731 AIR carboxylase RGna_RS07715 PF00156 Phosphoribosyl transferase domain RGna_RS07720 PF18317 Shikimate 5'-dehydrogenase C-terminal domain RGna_RS07720 PF08501 Shikimate dehydrogenase substrate binding domain RGna_RS07725 PF00724 NADH:flavin oxidoreductase / NADH oxidase family RGna_RS07725 PF07992 Pyridine nucleotide-disulphide oxidoreductase RGna_RS07735 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RGna_RS07735 PF03466 LysR substrate binding domain RGna_RS07740 PF01180 Dihydroorotate dehydrogenase RGna_RS07745 PF00175 Oxidoreductase NAD-binding domain RGna_RS07745 PF10418 Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B RGna_RS07750 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family RGna_RS07755 PF01979 Amidohydrolase family RGna_RS07770 PF00232 Glycosyl hydrolase family 1 RGna_RS07775 PF02378 Phosphotransferase system, EIIC RGna_RS07775 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 RGna_RS07775 PF00367 phosphotransferase system, EIIB RGna_RS07780 PF01380 SIS domain RGna_RS07780 PF01418 Helix-turn-helix domain, rpiR family RGna_RS07785 PF00004 ATPase family associated with various cellular activities (AAA) RGna_RS07785 PF01434 Peptidase family M41 RGna_RS07785 PF17862 AAA+ lid domain RGna_RS07785 PF06480 FtsH Extracellular RGna_RS07790 PF01235 Sodium:alanine symporter family RGna_RS07800 PF00226 DnaJ domain RGna_RS07800 PF01556 DnaJ C terminal domain RGna_RS07800 PF00684 DnaJ central domain RGna_RS07815 PF01171 PP-loop family RGna_RS07820 PF00106 short chain dehydrogenase RGna_RS07825 PF00589 Phage integrase family RGna_RS07825 PF14659 Phage integrase, N-terminal SAM-like domain RGna_RS07850 PF03389 MobA/MobL family RGna_RS07850 PF17841 BID domain of Bartonella effector protein (Bep) RGna_RS07850 PF01443 Viral (Superfamily 1) RNA helicase RGna_RS07875 PF12704 MacB-like periplasmic core domain RGna_RS07875 PF02687 FtsX-like permease family RGna_RS07875 PF00005 ABC transporter RGna_RS07930 PF02837 Glycosyl hydrolases family 2, sugar binding domain RGna_RS07930 PF00703 Glycosyl hydrolases family 2 RGna_RS07930 PF18565 Glycoside hydrolase family 2 C-terminal domain 5 RGna_RS07930 PF02836 Glycosyl hydrolases family 2, TIM barrel domain RGna_RS07945 PF02378 Phosphotransferase system, EIIC RGna_RS07945 PF00367 phosphotransferase system, EIIB RGna_RS07945 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 RGna_RS07950 PF00874 PRD domain RGna_RS07950 PF03123 CAT RNA binding domain RGna_RS07960 PF01725 Ham1 family RGna_RS07965 PF01170 Putative RNA methylase family UPF0020 RGna_RS07965 PF02926 THUMP domain RGna_RS07990 PF03275 UDP-galactopyranose mutase RGna_RS08000 PF02867 Ribonucleotide reductase, barrel domain RGna_RS08000 PF03477 ATP cone domain RGna_RS08000 PF00317 Ribonucleotide reductase, all-alpha domain RGna_RS08005 PF00268 Ribonucleotide reductase, small chain RGna_RS08010 PF00579 tRNA synthetases class I (W and Y) RGna_RS08035 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RGna_RS08035 PF00512 His Kinase A (phospho-acceptor) domain RGna_RS08035 PF00672 HAMP domain RGna_RS08035 PF13426 PAS domain RGna_RS08045 PF01327 Polypeptide deformylase RGna_RS08055 PF00005 ABC transporter RGna_RS08060 PF00072 Response regulator receiver domain RGna_RS08060 PF00486 Transcriptional regulatory protein, C terminal RGna_RS08075 PF00781 Diacylglycerol kinase catalytic domain RGna_RS08085 PF17746 SfsA N-terminal OB domain RGna_RS08085 PF03749 Sugar fermentation stimulation protein RE domain RGna_RS08090 PF00679 Elongation factor G C-terminus RGna_RS08090 PF14492 Elongation Factor G, domain II RGna_RS08090 PF03764 Elongation factor G, domain IV RGna_RS08090 PF00009 Elongation factor Tu GTP binding domain RGna_RS08095 PF00005 ABC transporter RGna_RS08100 PF00528 Binding-protein-dependent transport system inner membrane component RGna_RS08105 PF00497 Bacterial extracellular solute-binding proteins, family 3 RGna_RS08110 PF02673 Bacitracin resistance protein BacA RGna_RS08120 PF07486 Cell Wall Hydrolase RGna_RS08120 PF01471 Putative peptidoglycan binding domain RGna_RS08130 PF00465 Iron-containing alcohol dehydrogenase RGna_RS08130 PF00171 Aldehyde dehydrogenase family RGna_RS08140 PF01196 Ribosomal protein L17 RGna_RS08150 PF00163 Ribosomal protein S4/S9 N-terminal domain RGna_RS08150 PF01479 S4 domain RGna_RS08155 PF00411 Ribosomal protein S11 RGna_RS08160 PF00416 Ribosomal protein S13/S18 RGna_RS08165 PF00444 Ribosomal protein L36 RGna_RS08170 PF01176 Translation initiation factor 1A / IF-1 RGna_RS08180 PF05191 Adenylate kinase, active site lid RGna_RS08185 PF00344 SecY translocase RGna_RS08190 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A RGna_RS08195 PF00327 Ribosomal protein L30p/L7e RGna_RS08200 PF00333 Ribosomal protein S5, N-terminal domain RGna_RS08200 PF03719 Ribosomal protein S5, C-terminal domain RGna_RS08205 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast RGna_RS08210 PF00347 Ribosomal protein L6 RGna_RS08215 PF00410 Ribosomal protein S8 RGna_RS08220 PF00253 Ribosomal protein S14p/S29e RGna_RS08225 PF00281 Ribosomal protein L5 RGna_RS08225 PF00673 ribosomal L5P family C-terminus RGna_RS08230 PF00467 KOW motif RGna_RS08230 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 RGna_RS08235 PF00238 Ribosomal protein L14p/L23e RGna_RS08240 PF00366 Ribosomal protein S17 RGna_RS08245 PF00831 Ribosomal L29 protein RGna_RS08250 PF00252 Ribosomal protein L16p/L10e RGna_RS08255 PF00189 Ribosomal protein S3, C-terminal domain RGna_RS08255 PF07650 KH domain RGna_RS08260 PF00237 Ribosomal protein L22p/L17e RGna_RS08265 PF00203 Ribosomal protein S19 RGna_RS08270 PF03947 Ribosomal Proteins L2, C-terminal domain RGna_RS08270 PF00181 Ribosomal Proteins L2, RNA binding domain RGna_RS08275 PF00276 Ribosomal protein L23 RGna_RS08280 PF00573 Ribosomal protein L4/L1 family RGna_RS08285 PF00297 Ribosomal protein L3 RGna_RS08290 PF00338 Ribosomal protein S10p/S20e RGna_RS08295 PF02926 THUMP domain RGna_RS08295 PF10672 S-adenosylmethionine-dependent methyltransferase RGna_RS08295 PF01170 Putative RNA methylase family UPF0020 RGna_RS08300 PF02146 Sir2 family RGna_RS08315 PF13411 MerR HTH family regulatory protein RGna_RS08320 PF00480 ROK family RGna_RS08325 PF00701 Dihydrodipicolinate synthetase family RGna_RS08330 PF04131 Putative N-acetylmannosamine-6-phosphate epimerase RGna_RS08335 PF02012 BNR/Asp-box repeat RGna_RS08335 PF02973 Sialidase, N-terminal domain RGna_RS08335 PF13088 BNR repeat-like domain RGna_RS08340 PF02894 Oxidoreductase family, C-terminal alpha/beta domain RGna_RS08340 PF01408 Oxidoreductase family, NAD-binding Rossmann fold RGna_RS08345 PF00528 Binding-protein-dependent transport system inner membrane component RGna_RS08350 PF00528 Binding-protein-dependent transport system inner membrane component RGna_RS08355 PF13416 Bacterial extracellular solute-binding protein RGna_RS08360 PF07883 Cupin domain RGna_RS08360 PF12833 Helix-turn-helix domain RGna_RS08365 PF04074 YhcH/YjgK/YiaL RGna_RS08375 PF00232 Glycosyl hydrolase family 1 RGna_RS08400 PF01554 MatE RGna_RS08410 PF07470 Glycosyl Hydrolase Family 88 RGna_RS08415 PF01839 FG-GAP repeat RGna_RS08415 PF18370 Rhamnogalacturonan I lyases beta-sheet domain RGna_RS08420 PF01547 Bacterial extracellular solute-binding protein RGna_RS08425 PF00528 Binding-protein-dependent transport system inner membrane component RGna_RS08430 PF00528 Binding-protein-dependent transport system inner membrane component RGna_RS08435 PF02311 AraC-like ligand binding domain RGna_RS08435 PF12833 Helix-turn-helix domain RGna_RS08460 PF00356 Bacterial regulatory proteins, lacI family RGna_RS08465 PF01487 Type I 3-dehydroquinase RGna_RS08490 PF00128 Alpha amylase, catalytic domain RGna_RS08490 PF02903 Alpha amylase, N-terminal ig-like domain RGna_RS08490 PF16657 Maltogenic Amylase, C-terminal domain RGna_RS08495 PF02446 4-alpha-glucanotransferase RGna_RS08500 PF00343 Carbohydrate phosphorylase RGna_RS08510 PF17999 Pullulanase N1-terminal domain RGna_RS08510 PF00128 Alpha amylase, catalytic domain RGna_RS08510 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) RGna_RS08515 PF00528 Binding-protein-dependent transport system inner membrane component RGna_RS08520 PF00528 Binding-protein-dependent transport system inner membrane component RGna_RS08530 PF00356 Bacterial regulatory proteins, lacI family RGna_RS08550 PF03060 Nitronate monooxygenase RGna_RS08555 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit RGna_RS08560 PF02785 Biotin carboxylase C-terminal domain RGna_RS08560 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain RGna_RS08560 PF00289 Biotin carboxylase, N-terminal domain RGna_RS08565 PF07977 FabA-like domain RGna_RS08570 PF00364 Biotin-requiring enzyme RGna_RS08575 PF00109 Beta-ketoacyl synthase, N-terminal domain RGna_RS08575 PF02801 Beta-ketoacyl synthase, C-terminal domain RGna_RS08585 PF00698 Acyl transferase domain RGna_RS08590 PF03060 Nitronate monooxygenase RGna_RS08595 PF00550 Phosphopantetheine attachment site RGna_RS08600 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal RGna_RS08600 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III RGna_RS08615 PF01554 MatE RGna_RS08625 PF02929 Beta galactosidase small chain RGna_RS08635 PF00684 DnaJ central domain RGna_RS08635 PF01556 DnaJ C terminal domain RGna_RS08635 PF00226 DnaJ domain RGna_RS08660 PF00005 ABC transporter RGna_RS08670 PF13476 AAA domain RGna_RS08675 PF12320 Type 5 capsule protein repressor C-terminal domain RGna_RS08675 PF00149 Calcineurin-like phosphoesterase RGna_RS08685 PF12437 Glutamine synthetase type III N terminal RGna_RS08685 PF00120 Glutamine synthetase, catalytic domain RGna_RS08685 PF18318 Glutamine synthetase C-terminal domain RGna_RS08690 PF01116 Fructose-bisphosphate aldolase class-II RGna_RS08700 PF00781 Diacylglycerol kinase catalytic domain RGna_RS08705 PF00381 PTS HPr component phosphorylation site RGna_RS08710 PF10298 WhiA N-terminal LAGLIDADG-like domain RGna_RS08710 PF02650 WhiA C-terminal HTH domain RGna_RS08710 PF14527 WhiA LAGLIDADG-like domain RGna_RS08715 PF03668 P-loop ATPase protein family RGna_RS08720 PF01565 FAD binding domain RGna_RS08720 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain RGna_RS08725 PF00571 CBS domain RGna_RS08725 PF03471 Transporter associated domain RGna_RS08725 PF01595 Cyclin M transmembrane N-terminal domain RGna_RS08735 PF08239 Bacterial SH3 domain RGna_RS08735 PF01520 N-acetylmuramoyl-L-alanine amidase RGna_RS08740 PF08769 Sporulation initiation factor Spo0A C terminal RGna_RS08740 PF00072 Response regulator receiver domain RGna_RS08750 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain RGna_RS08750 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I RGna_RS08750 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II RGna_RS08750 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III RGna_RS08760 PF02502 Ribose/Galactose Isomerase RGna_RS08770 PF00528 Binding-protein-dependent transport system inner membrane component RGna_RS08785 PF00005 ABC transporter RGna_RS08785 PF00664 ABC transporter transmembrane region RGna_RS08795 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain RGna_RS08795 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain RGna_RS08815 PF03144 Elongation factor Tu domain 2 RGna_RS08815 PF03143 Elongation factor Tu C-terminal domain RGna_RS08815 PF00009 Elongation factor Tu GTP binding domain RGna_RS08820 PF00679 Elongation factor G C-terminus RGna_RS08820 PF14492 Elongation Factor G, domain II RGna_RS08820 PF03764 Elongation factor G, domain IV RGna_RS08820 PF00009 Elongation factor Tu GTP binding domain RGna_RS08820 PF03144 Elongation factor Tu domain 2 RGna_RS08825 PF00177 Ribosomal protein S7p/S5e RGna_RS08830 PF00164 Ribosomal protein S12/S23 RGna_RS08840 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) RGna_RS08840 PF03129 Anticodon binding domain RGna_RS08840 PF09180 Prolyl-tRNA synthetase, C-terminal RGna_RS08845 PF05816 Toxic anion resistance protein (TelA) RGna_RS08855 PF01479 S4 domain RGna_RS08855 PF00849 RNA pseudouridylate synthase RGna_RS08860 PF00999 Sodium/hydrogen exchanger family RGna_RS08860 PF02080 TrkA-C domain RGna_RS08860 PF03471 Transporter associated domain RGna_RS08865 PF04026 SpoVG RGna_RS08870 PF00483 Nucleotidyl transferase RGna_RS08870 PF00132 Bacterial transferase hexapeptide (six repeats) RGna_RS08875 PF00483 Nucleotidyl transferase RGna_RS08875 PF00132 Bacterial transferase hexapeptide (six repeats) RGna_RS08880 PF01225 Mur ligase family, catalytic domain RGna_RS08880 PF02875 Mur ligase family, glutamate ligase domain RGna_RS08880 PF08245 Mur ligase middle domain RGna_RS08890 PF08299 Bacterial dnaA protein helix-turn-helix RGna_RS08890 PF11638 DnaA N-terminal domain RGna_RS08890 PF00308 Bacterial dnaA protein RGna_RS08895 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase RGna_RS08895 PF14572 Phosphoribosyl synthetase-associated domain RGna_RS08900 PF03030 Inorganic H+ pyrophosphatase RGna_RS08905 PF00512 His Kinase A (phospho-acceptor) domain RGna_RS08905 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RGna_RS08905 PF02702 Osmosensitive K+ channel His kinase sensor domain RGna_RS08905 PF13493 Domain of unknown function (DUF4118) RGna_RS08910 PF00486 Transcriptional regulatory protein, C terminal RGna_RS08910 PF00072 Response regulator receiver domain RGna_RS08920 PF00623 RNA polymerase Rpb1, domain 2 RGna_RS08920 PF05000 RNA polymerase Rpb1, domain 4 RGna_RS08920 PF04983 RNA polymerase Rpb1, domain 3 RGna_RS08920 PF04997 RNA polymerase Rpb1, domain 1 RGna_RS08920 PF04998 RNA polymerase Rpb1, domain 5 RGna_RS08930 PF16320 Ribosomal protein L7/L12 dimerisation domain RGna_RS08930 PF00542 Ribosomal protein L7/L12 C-terminal domain RGna_RS08935 PF00466 Ribosomal protein L10 RGna_RS08940 PF00687 Ribosomal protein L1p/L10e family RGna_RS08945 PF03946 Ribosomal protein L11, N-terminal domain RGna_RS08945 PF00298 Ribosomal protein L11, RNA binding domain RGna_RS08950 PF02357 Transcription termination factor nusG RGna_RS08950 PF00467 KOW motif RGna_RS08960 PF00471 Ribosomal protein L33 RGna_RS08965 PF01293 Phosphoenolpyruvate carboxykinase RGna_RS08970 PF02492 CobW/HypB/UreG, nucleotide-binding domain RGna_RS08975 PF07992 Pyridine nucleotide-disulphide oxidoreductase RGna_RS08975 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster RGna_RS08980 PF01155 Hydrogenase/urease nickel incorporation, metallochaperone, hypA RGna_RS08990 PF01381 Helix-turn-helix RGna_RS09005 PF13358 DDE superfamily endonuclease RGna_RS09015 PF00309 Sigma-54 factor, Activator interacting domain (AID) RGna_RS09015 PF04552 Sigma-54, DNA binding domain RGna_RS09015 PF04963 Sigma-54 factor, core binding domain RGna_RS09020 PF00874 PRD domain RGna_RS09020 PF00158 Sigma-54 interaction domain RGna_RS09040 PF03613 PTS system mannose/fructose/sorbose family IID component RGna_RS09045 PF03609 PTS system sorbose-specific iic component RGna_RS09050 PF03830 PTS system sorbose subfamily IIB component RGna_RS09080 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RGna_RS09080 PF03466 LysR substrate binding domain RGna_RS09085 PF00282 Pyridoxal-dependent decarboxylase conserved domain RGna_RS09090 PF13537 Glutamine amidotransferase domain RGna_RS09090 PF00733 Asparagine synthase RGna_RS09100 PF02810 SEC-C motif RGna_RS09100 PF01043 SecA preprotein cross-linking domain RGna_RS09100 PF07517 SecA DEAD-like domain RGna_RS09100 PF07516 SecA Wing and Scaffold domain RGna_RS09140 PF17757 UvrB interaction domain RGna_RS09140 PF12344 Ultra-violet resistance protein B RGna_RS09140 PF02151 UvrB/uvrC motif RGna_RS09140 PF04851 Type III restriction enzyme, res subunit RGna_RS09140 PF00271 Helicase conserved C-terminal domain RGna_RS09145 PF00486 Transcriptional regulatory protein, C terminal RGna_RS09145 PF00072 Response regulator receiver domain RGna_RS09150 PF00512 His Kinase A (phospho-acceptor) domain RGna_RS09165 PF00171 Aldehyde dehydrogenase family RGna_RS09175 PF03063 Prismane/CO dehydrogenase family RGna_RS09235 PF00072 Response regulator receiver domain RGna_RS09275 PF02899 Phage integrase, N-terminal SAM-like domain RGna_RS09275 PF00589 Phage integrase family RGna_RS09315 PF05147 Lanthionine synthetase C-like protein RGna_RS09315 PF13575 Domain of unknown function (DUF4135) RGna_RS09320 PF13333 Integrase core domain RGna_RS09320 PF13276 HTH-like domain RGna_RS09320 PF00665 Integrase core domain RGna_RS09370 PF00005 ABC transporter RGna_RS09375 PF00005 ABC transporter RGna_RS09380 PF00595 PDZ domain RGna_RS09380 PF03572 Peptidase family S41 RGna_RS09405 PF00877 NlpC/P60 family RGna_RS09455 PF00689 Cation transporting ATPase, C-terminus RGna_RS09455 PF00690 Cation transporter/ATPase, N-terminus RGna_RS09515 PF02586 SOS response associated peptidase (SRAP) RGna_RS09525 PF00817 impB/mucB/samB family RGna_RS09525 PF11799 impB/mucB/samB family C-terminal domain RGna_RS09585 PF00239 Resolvase, N terminal domain RGna_RS09585 PF02796 Helix-turn-helix domain of resolvase RGna_RS09590 PF00486 Transcriptional regulatory protein, C terminal RGna_RS09590 PF00072 Response regulator receiver domain RGna_RS09600 PF00438 S-adenosylmethionine synthetase, N-terminal domain RGna_RS09600 PF02772 S-adenosylmethionine synthetase, central domain RGna_RS09600 PF02773 S-adenosylmethionine synthetase, C-terminal domain RGna_RS09605 PF01381 Helix-turn-helix RGna_RS09615 PF00664 ABC transporter transmembrane region RGna_RS09615 PF00005 ABC transporter RGna_RS09625 PF13186 Iron-sulfur cluster-binding domain RGna_RS09625 PF04055 Radical SAM superfamily RGna_RS09630 PF06463 Molybdenum Cofactor Synthesis C RGna_RS09630 PF04055 Radical SAM superfamily RGna_RS09640 PF00082 Subtilase family RGna_RS09645 PF00005 ABC transporter RGna_RS09645 PF00664 ABC transporter transmembrane region RGna_RS09655 PF00882 Zinc dependent phospholipase C RGna_RS09665 PF00486 Transcriptional regulatory protein, C terminal RGna_RS09665 PF00072 Response regulator receiver domain RGna_RS09685 PF00072 Response regulator receiver domain RGna_RS09685 PF04397 LytTr DNA-binding domain RGna_RS09735 PF04203 Sortase domain RGna_RS09750 PF13538 UvrD-like helicase C-terminal domain RGna_RS09750 PF18335 ATP-dependent RecD-like DNA helicase SH3 domain RGna_RS09750 PF14490 Helix-hairpin-helix containing domain RGna_RS09775 PF00589 Phage integrase family RGna_RS09775 PF12167 Arm DNA-binding domain RGna_RS09780 PF00958 GMP synthase C terminal domain RGna_RS09780 PF00117 Glutamine amidotransferase class-I RGna_RS09780 PF02540 NAD synthase RGna_RS09790 PF04542 Sigma-70 region 2 RGna_RS09790 PF08281 Sigma-70, region 4 RGna_RS09800 PF00072 Response regulator receiver domain RGna_RS09800 PF04397 LytTr DNA-binding domain RGna_RS09805 PF02743 Cache domain RGna_RS09805 PF00672 HAMP domain RGna_RS09805 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RGna_RS09805 PF06580 Histidine kinase RGna_RS09810 PF12116 Stage III sporulation protein D RGna_RS09815 PF00150 Cellulase (glycosyl hydrolase family 5) RGna_RS09820 PF00150 Cellulase (glycosyl hydrolase family 5) RGna_RS09835 PF00578 AhpC/TSA family RGna_RS09840 PF01554 MatE RGna_RS09850 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase RGna_RS09850 PF05698 Bacterial trigger factor protein (TF) C-terminus RGna_RS09850 PF05697 Bacterial trigger factor protein (TF) RGna_RS09855 PF13091 PLD-like domain RGna_RS09855 PF13396 Phospholipase_D-nuclease N-terminal RGna_RS09870 PF01177 Asp/Glu/Hydantoin racemase RGna_RS09875 PF00365 Phosphofructokinase RGna_RS09880 PF02811 PHP domain RGna_RS09880 PF01336 OB-fold nucleic acid binding domain RGna_RS09880 PF07733 Bacterial DNA polymerase III alpha NTPase domain RGna_RS09880 PF14579 Helix-hairpin-helix motif RGna_RS09880 PF17657 Bacterial DNA polymerase III alpha subunit finger domain RGna_RS09890 PF13509 S1 domain RGna_RS09890 PF17783 CvfB-like winged helix domain RGna_RS09910 PF07729 FCD domain RGna_RS09910 PF00392 Bacterial regulatory proteins, gntR family RGna_RS09915 PF08544 GHMP kinases C terminal RGna_RS09915 PF00288 GHMP kinases N terminal domain RGna_RS09930 PF01553 Acyltransferase RGna_RS09935 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family RGna_RS09935 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain RGna_RS09935 PF17956 Nicotinate phosphoribosyltransferase C-terminal domain RGna_RS09940 PF01820 D-ala D-ala ligase N-terminus RGna_RS09940 PF07478 D-ala D-ala ligase C-terminus RGna_RS09945 PF01225 Mur ligase family, catalytic domain RGna_RS09945 PF08245 Mur ligase middle domain RGna_RS09945 PF02875 Mur ligase family, glutamate ligase domain RGna_RS09955 PF03956 Lysine exporter LysO RGna_RS09980 PF00730 HhH-GPD superfamily base excision DNA repair protein RGna_RS09980 PF00633 Helix-hairpin-helix motif RGna_RS10005 PF00005 ABC transporter RGna_RS10005 PF13732 Domain of unknown function (DUF4162) RGna_RS10015 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RGna_RS10015 PF00512 His Kinase A (phospho-acceptor) domain RGna_RS10025 PF00005 ABC transporter RGna_RS10030 PF00486 Transcriptional regulatory protein, C terminal RGna_RS10030 PF00072 Response regulator receiver domain RGna_RS10035 PF00290 Tryptophan synthase alpha chain RGna_RS10040 PF00291 Pyridoxal-phosphate dependent enzyme RGna_RS10045 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase RGna_RS10055 PF02885 Glycosyl transferase family, helical bundle domain RGna_RS10055 PF00591 Glycosyl transferase family, a/b domain RGna_RS10060 PF00117 Glutamine amidotransferase class-I RGna_RS10115 PF01938 TRAM domain RGna_RS10115 PF05958 tRNA (Uracil-5-)-methyltransferase RGna_RS10120 PF01336 OB-fold nucleic acid binding domain RGna_RS10120 PF01966 HD domain RGna_RS10125 PF13180 PDZ domain RGna_RS10130 PF01713 Smr domain RGna_RS10130 PF00488 MutS domain V RGna_RS10135 PF00486 Transcriptional regulatory protein, C terminal RGna_RS10135 PF00072 Response regulator receiver domain RGna_RS10140 PF16736 Single Cache-like RGna_RS10140 PF00989 PAS fold RGna_RS10140 PF00512 His Kinase A (phospho-acceptor) domain RGna_RS10140 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RGna_RS10155 PF03773 Predicted permease RGna_RS10175 PF12838 4Fe-4S dicluster domain RGna_RS10180 PF13411 MerR HTH family regulatory protein RGna_RS10185 PF00772 DnaB-like helicase N terminal domain RGna_RS10185 PF03796 DnaB-like helicase C terminal domain RGna_RS10190 PF03948 Ribosomal protein L9, C-terminal domain RGna_RS10190 PF01281 Ribosomal protein L9, N-terminal domain RGna_RS10195 PF01368 DHH family RGna_RS10195 PF02272 DHHA1 domain RGna_RS10200 PF01594 AI-2E family transporter RGna_RS10205 PF01084 Ribosomal protein S18 RGna_RS10210 PF00436 Single-strand binding protein family RGna_RS10215 PF01250 Ribosomal protein S6 RGna_RS10225 PF04203 Sortase domain RGna_RS10240 PF07724 AAA domain (Cdc48 subfamily) RGna_RS10240 PF10431 C-terminal, D2-small domain, of ClpB protein RGna_RS10260 PF00883 Cytosol aminopeptidase family, catalytic domain RGna_RS10260 PF02789 Cytosol aminopeptidase family, N-terminal domain RGna_RS10275 PF00528 Binding-protein-dependent transport system inner membrane component RGna_RS10280 PF00528 Binding-protein-dependent transport system inner membrane component RGna_RS10285 PF01547 Bacterial extracellular solute-binding protein RGna_RS10290 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RGna_RS10290 PF00672 HAMP domain RGna_RS10290 PF06580 Histidine kinase RGna_RS10290 PF02743 Cache domain RGna_RS10295 PF12833 Helix-turn-helix domain RGna_RS10295 PF00072 Response regulator receiver domain RGna_RS10310 PF01055 Glycosyl hydrolases family 31 RGna_RS10310 PF16338 Domain of unknown function (DUF4968) RGna_RS10310 PF17137 Domain of unknown function (DUF5110) RGna_RS10330 PF13457 GW (Gly-Tryp) dipeptide domain RGna_RS10330 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase RGna_RS10335 PF05105 Bacteriophage holin family RGna_RS10390 PF05593 RHS Repeat RGna_RS10395 PF01381 Helix-turn-helix RGna_RS10445 PF02780 Transketolase, C-terminal domain RGna_RS10445 PF02779 Transketolase, pyrimidine binding domain RGna_RS10450 PF00456 Transketolase, thiamine diphosphate binding domain RGna_RS10455 PF00923 Transaldolase/Fructose-6-phosphate aldolase RGna_RS10460 PF00356 Bacterial regulatory proteins, lacI family RGna_RS10465 PF02132 RecR protein RGna_RS10465 PF13662 Toprim domain RGna_RS10470 PF02575 YbaB/EbfC DNA-binding family RGna_RS10475 PF12169 DNA polymerase III subunits gamma and tau domain III RGna_RS10480 PF00365 Phosphofructokinase RGna_RS10485 PF02810 SEC-C motif RGna_RS10485 PF00557 Metallopeptidase family M24 RGna_RS10495 PF00128 Alpha amylase, catalytic domain RGna_RS10495 PF02903 Alpha amylase, N-terminal ig-like domain RGna_RS10500 PF01434 Peptidase family M41 RGna_RS10500 PF17862 AAA+ lid domain RGna_RS10500 PF00004 ATPase family associated with various cellular activities (AAA) RGna_RS10500 PF06480 FtsH Extracellular RGna_RS10510 PF01171 PP-loop family RGna_RS10510 PF11734 TilS substrate C-terminal domain RGna_RS10515 PF07228 Stage II sporulation protein E (SpoIIE) RGna_RS10530 PF07873 YabP family RGna_RS10535 PF01479 S4 domain RGna_RS10540 PF00216 Bacterial DNA-binding protein RGna_RS10545 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II RGna_RS10545 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain RGna_RS10545 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III RGna_RS10545 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I RGna_RS10555 PF12627 Probable RNA and SrmB- binding site of polymerase A RGna_RS10555 PF13735 tRNA nucleotidyltransferase domain 2 putative RGna_RS10555 PF01743 Poly A polymerase head domain RGna_RS10565 PF12320 Type 5 capsule protein repressor C-terminal domain RGna_RS10565 PF00149 Calcineurin-like phosphoesterase RGna_RS10580 PF00037 4Fe-4S binding domain RGna_RS10580 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region RGna_RS10580 PF02906 Iron only hydrogenase large subunit, C-terminal domain RGna_RS10580 PF02256 Iron hydrogenase small subunit RGna_RS10585 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region RGna_RS10585 PF00037 4Fe-4S binding domain RGna_RS10585 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit RGna_RS10595 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RGna_RS10595 PF03466 LysR substrate binding domain RGna_RS10600 PF01479 S4 domain RGna_RS10600 PF00579 tRNA synthetases class I (W and Y) RGna_RS10605 PF03932 CutC family RGna_RS10610 PF00367 phosphotransferase system, EIIB RGna_RS10610 PF02378 Phosphotransferase system, EIIC RGna_RS10615 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 RGna_RS10615 PF00367 phosphotransferase system, EIIB RGna_RS10615 PF02378 Phosphotransferase system, EIIC RGna_RS10620 PF03123 CAT RNA binding domain RGna_RS10620 PF00874 PRD domain RGna_RS10625 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase RGna_RS10630 PF01416 tRNA pseudouridine synthase RGna_RS10635 PF02361 Cobalt transport protein RGna_RS10640 PF00005 ABC transporter RGna_RS10645 PF00005 ABC transporter RGna_RS10655 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD RGna_RS10670 PF17912 MalK OB fold domain RGna_RS10670 PF03459 TOBE domain RGna_RS10670 PF00005 ABC transporter RGna_RS10675 PF13556 PucR C-terminal helix-turn-helix domain RGna_RS10690 PF00356 Bacterial regulatory proteins, lacI family RGna_RS10720 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RGna_RS10725 PF00486 Transcriptional regulatory protein, C terminal RGna_RS10725 PF00072 Response regulator receiver domain RGna_RS10735 PF00005 ABC transporter RGna_RS10740 PF00005 ABC transporter RGna_RS10740 PF00664 ABC transporter transmembrane region RGna_RS10745 PF00664 ABC transporter transmembrane region RGna_RS10745 PF00005 ABC transporter RGna_RS10760 PF00005 ABC transporter RGna_RS10760 PF08402 TOBE domain RGna_RS10765 PF02653 Branched-chain amino acid transport system / permease component RGna_RS10780 PF01156 Inosine-uridine preferring nucleoside hydrolase RGna_RS10785 PF00294 pfkB family carbohydrate kinase RGna_RS10790 PF00465 Iron-containing alcohol dehydrogenase RGna_RS10795 PF13419 Haloacid dehalogenase-like hydrolase RGna_RS10800 PF01156 Inosine-uridine preferring nucleoside hydrolase RGna_RS10805 PF00294 pfkB family carbohydrate kinase RGna_RS10810 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase RGna_RS10820 PF00005 ABC transporter RGna_RS10825 PF02361 Cobalt transport protein RGna_RS10835 PF00356 Bacterial regulatory proteins, lacI family RGna_RS10865 PF00772 DnaB-like helicase N terminal domain RGna_RS10865 PF03796 DnaB-like helicase C terminal domain RGna_RS10885 PF00512 His Kinase A (phospho-acceptor) domain RGna_RS10885 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RGna_RS10890 PF00486 Transcriptional regulatory protein, C terminal RGna_RS10890 PF00072 Response regulator receiver domain RGna_RS10895 PF01183 Glycosyl hydrolases family 25 RGna_RS10900 PF14659 Phage integrase, N-terminal SAM-like domain RGna_RS10900 PF00589 Phage integrase family RGna_RS10910 PF18106 Rolling Circle replication initiation protein N-terminal domain RGna_RS10910 PF02486 Replication initiation factor RGna_RS10955 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain RGna_RS10960 PF07992 Pyridine nucleotide-disulphide oxidoreductase RGna_RS10960 PF00724 NADH:flavin oxidoreductase / NADH oxidase family RGna_RS10970 PF01979 Amidohydrolase family RGna_RS10985 PF00285 Citrate synthase, C-terminal domain RGna_RS10990 PF00398 Ribosomal RNA adenine dimethylase RGna_RS10995 PF01026 TatD related DNase RGna_RS11010 PF08281 Sigma-70, region 4 RGna_RS11010 PF04542 Sigma-70 region 2 RGna_RS11015 PF00694 Aconitase C-terminal domain RGna_RS11015 PF00330 Aconitase family (aconitate hydratase) RGna_RS11040 PF02311 AraC-like ligand binding domain RGna_RS11040 PF12833 Helix-turn-helix domain RGna_RS11045 PF00342 Phosphoglucose isomerase RGna_RS11070 PF04101 Glycosyltransferase family 28 C-terminal domain RGna_RS11070 PF03033 Glycosyltransferase family 28 N-terminal domain RGna_RS11080 PF01230 HIT domain RGna_RS11085 PF00512 His Kinase A (phospho-acceptor) domain RGna_RS11085 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RGna_RS11085 PF00989 PAS fold RGna_RS11090 PF01694 Rhomboid family RGna_RS11135 PF00437 Type II/IV secretion system protein RGna_RS11150 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region RGna_RS11160 PF03481 Putative GTP-binding controlling metal-binding RGna_RS11160 PF01300 Telomere recombination RGna_RS11165 PF01520 N-acetylmuramoyl-L-alanine amidase RGna_RS11170 PF07992 Pyridine nucleotide-disulphide oxidoreductase RGna_RS11170 PF00724 NADH:flavin oxidoreductase / NADH oxidase family RGna_RS11180 PF12833 Helix-turn-helix domain RGna_RS11195 PF00704 Glycosyl hydrolases family 18 RGna_RS11205 PF05389 Negative regulator of genetic competence (MecA) RGna_RS11215 PF00877 NlpC/P60 family RGna_RS11220 PF01475 Ferric uptake regulator family RGna_RS11225 PF02915 Rubrerythrin RGna_RS11230 PF01541 GIY-YIG catalytic domain RGna_RS11235 PF01551 Peptidase family M23 RGna_RS11240 PF08486 Stage II sporulation protein RGna_RS11250 PF00343 Carbohydrate phosphorylase RGna_RS11255 PF00133 tRNA synthetases class I (I, L, M and V) RGna_RS11255 PF08264 Anticodon-binding domain of tRNA RGna_RS11275 PF01566 Natural resistance-associated macrophage protein RGna_RS11285 PF00356 Bacterial regulatory proteins, lacI family RGna_RS11290 PF00684 DnaJ central domain RGna_RS11290 PF01556 DnaJ C terminal domain RGna_RS11290 PF00226 DnaJ domain RGna_RS11295 PF00011 Hsp20/alpha crystallin family RGna_RS11315 PF13183 4Fe-4S dicluster domain RGna_RS11315 PF13085 2Fe-2S iron-sulfur cluster binding domain RGna_RS11320 PF00890 FAD binding domain RGna_RS11320 PF02910 Fumarate reductase flavoprotein C-term RGna_RS11335 PF00403 Heavy-metal-associated domain RGna_RS11340 PF01022 Bacterial regulatory protein, arsR family RGna_RS11350 PF03432 Relaxase/Mobilisation nuclease domain RGna_RS11390 PF02659 Putative manganese efflux pump RGna_RS11395 PF17910 FeoB cytosolic helical domain RGna_RS11395 PF07664 Ferrous iron transport protein B C terminus RGna_RS11395 PF02421 Ferrous iron transport protein B RGna_RS11395 PF04023 FeoA domain RGna_RS11395 PF07670 Nucleoside recognition RGna_RS11400 PF02780 Transketolase, C-terminal domain RGna_RS11400 PF02779 Transketolase, pyrimidine binding domain RGna_RS11400 PF13292 1-deoxy-D-xylulose-5-phosphate synthase RGna_RS11425 PF00834 Ribulose-phosphate 3 epimerase family RGna_RS11430 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component RGna_RS11445 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) RGna_RS11445 PF02403 Seryl-tRNA synthetase N-terminal domain RGna_RS11455 PF02195 ParB-like nuclease domain RGna_RS11455 PF17762 HTH domain found in ParB protein RGna_RS11460 PF13614 AAA domain RGna_RS11470 PF02527 rRNA small subunit methyltransferase G RGna_RS11475 PF13932 GidA associated domain RGna_RS11475 PF01134 Glucose inhibited division protein A RGna_RS11480 PF10396 GTP-binding protein TrmE N-terminus RGna_RS11480 PF12631 MnmE helical domain RGna_RS11480 PF01926 50S ribosome-binding GTPase RGna_RS11485 PF01424 R3H domain RGna_RS11485 PF14804 Jag N-terminus RGna_RS11490 PF02096 60Kd inner membrane protein RGna_RS11495 PF01809 Putative membrane protein insertion efficiency factor RGna_RS11500 PF00825 Ribonuclease P RGna_RS11505 PF00468 Ribosomal protein L34 RGna_RS11510 PF11638 DnaA N-terminal domain RGna_RS11510 PF08299 Bacterial dnaA protein helix-turn-helix RGna_RS11510 PF00308 Bacterial dnaA protein RGna_RS11515 PF00712 DNA polymerase III beta subunit, N-terminal domain RGna_RS11515 PF02767 DNA polymerase III beta subunit, central domain RGna_RS11515 PF02768 DNA polymerase III beta subunit, C-terminal domain RGna_RS11525 PF02463 RecF/RecN/SMC N terminal domain RGna_RS11530 PF01751 Toprim domain RGna_RS11530 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RGna_RS11530 PF00986 DNA gyrase B subunit, carboxyl terminus RGna_RS11530 PF00204 DNA gyrase B RGna_RS11535 PF03989 DNA gyrase C-terminal domain, beta-propeller RGna_RS11535 PF00521 DNA gyrase/topoisomerase IV, subunit A RGna_RS11545 PF05681 Fumarate hydratase (Fumerase) RGna_RS11560 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RGna_RS11560 PF03466 LysR substrate binding domain RGna_RS11565 PF09383 NIL domain RGna_RS11565 PF00005 ABC transporter RGna_RS11570 PF00528 Binding-protein-dependent transport system inner membrane component RGna_RS11575 PF03180 NLPA lipoprotein RGna_RS11645 PF01276 Orn/Lys/Arg decarboxylase, major domain RGna_RS11645 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain RGna_RS11650 PF00625 Guanylate kinase RGna_RS11660 PF00528 Binding-protein-dependent transport system inner membrane component RGna_RS11665 PF00528 Binding-protein-dependent transport system inner membrane component RGna_RS11670 PF13416 Bacterial extracellular solute-binding protein RGna_RS11680 PF13419 Haloacid dehalogenase-like hydrolase RGna_RS11685 PF17912 MalK OB fold domain RGna_RS11685 PF00005 ABC transporter RGna_RS11685 PF03459 TOBE domain RGna_RS11690 PF09115 DNA polymerase III, delta subunit, C terminal RGna_RS11695 PF04468 PSP1 C-terminal conserved region RGna_RS11700 PF05175 Methyltransferase small domain RGna_RS11705 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases RGna_RS11710 PF00005 ABC transporter RGna_RS11725 PF07670 Nucleoside recognition RGna_RS11740 PF04397 LytTr DNA-binding domain RGna_RS11740 PF00072 Response regulator receiver domain RGna_RS11750 PF02837 Glycosyl hydrolases family 2, sugar binding domain RGna_RS11750 PF18565 Glycoside hydrolase family 2 C-terminal domain 5 RGna_RS11750 PF02836 Glycosyl hydrolases family 2, TIM barrel domain RGna_RS11750 PF16355 Domain of unknown function (DUF4982) RGna_RS11750 PF00703 Glycosyl hydrolases family 2 RGna_RS11755 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 RGna_RS11780 PF12850 Calcineurin-like phosphoesterase superfamily domain RGna_RS11800 PF00392 Bacterial regulatory proteins, gntR family RGna_RS11805 PF00005 ABC transporter RGna_RS11815 PF02445 Quinolinate synthetase A protein RGna_RS11820 PF00890 FAD binding domain RGna_RS11825 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain RGna_RS11825 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain RGna_RS11830 PF08279 HTH domain RGna_RS11830 PF02829 3H domain RGna_RS11835 PF01588 Putative tRNA binding domain RGna_RS11835 PF09334 tRNA synthetases class I (M) RGna_RS11845 PF00460 Flagella basal body rod protein RGna_RS11845 PF06429 Flagellar basal body rod FlgEFG protein C-terminal RGna_RS11860 PF02719 Polysaccharide biosynthesis protein RGna_RS11865 PF02397 Bacterial sugar transferase RGna_RS11870 PF13579 Glycosyl transferase 4-like domain RGna_RS11870 PF00534 Glycosyl transferases group 1 RGna_RS11875 PF00535 Glycosyl transferase family 2 RGna_RS11885 PF14883 Hypothetical glycosyl hydrolase family 13 RGna_RS11885 PF01522 Polysaccharide deacetylase RGna_RS11890 PF13439 Glycosyltransferase Family 4 RGna_RS11890 PF00534 Glycosyl transferases group 1 RGna_RS11900 PF13439 Glycosyltransferase Family 4 RGna_RS11900 PF00534 Glycosyl transferases group 1 RGna_RS11915 PF04464 CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase RGna_RS11920 PF01467 Cytidylyltransferase-like RGna_RS11925 PF13579 Glycosyl transferase 4-like domain RGna_RS11940 PF03102 NeuB family RGna_RS11940 PF08666 SAF domain RGna_RS11945 PF13472 GDSL-like Lipase/Acylhydrolase family RGna_RS11945 PF02348 Cytidylyltransferase RGna_RS11950 PF02350 UDP-N-acetylglucosamine 2-epimerase RGna_RS11955 PF08485 Polysaccharide biosynthesis protein C-terminal RGna_RS11955 PF02719 Polysaccharide biosynthesis protein RGna_RS11960 PF01370 NAD dependent epimerase/dehydratase family RGna_RS11970 PF02350 UDP-N-acetylglucosamine 2-epimerase RGna_RS11980 PF01636 Phosphotransferase enzyme family RGna_RS11985 PF02706 Chain length determinant protein RGna_RS11990 PF04203 Sortase domain RGna_RS12015 PF13614 AAA domain RGna_RS12020 PF00128 Alpha amylase, catalytic domain RGna_RS12020 PF02806 Alpha amylase, C-terminal all-beta domain RGna_RS12020 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) RGna_RS12035 PF18565 Glycoside hydrolase family 2 C-terminal domain 5 RGna_RS12035 PF00703 Glycosyl hydrolases family 2 RGna_RS12035 PF16355 Domain of unknown function (DUF4982) RGna_RS12035 PF02836 Glycosyl hydrolases family 2, TIM barrel domain RGna_RS12035 PF02837 Glycosyl hydrolases family 2, sugar binding domain RGna_RS12050 PF00933 Glycosyl hydrolase family 3 N terminal domain RGna_RS12050 PF01915 Glycosyl hydrolase family 3 C-terminal domain RGna_RS12050 PF14310 Fibronectin type III-like domain RGna_RS12060 PF00072 Response regulator receiver domain RGna_RS12060 PF01339 CheB methylesterase RGna_RS12070 PF01263 Aldose 1-epimerase RGna_RS12075 PF00132 Bacterial transferase hexapeptide (six repeats) RGna_RS12075 PF00483 Nucleotidyl transferase RGna_RS12080 PF00132 Bacterial transferase hexapeptide (six repeats) RGna_RS12080 PF00483 Nucleotidyl transferase RGna_RS12085 PF01546 Peptidase family M20/M25/M40 RGna_RS12095 PF03883 Peroxide stress protein YaaA RGna_RS12105 PF02545 Maf-like protein RGna_RS12120 PF17191 RecG wedge domain RGna_RS12120 PF00270 DEAD/DEAH box helicase RGna_RS12120 PF13749 Putative ATP-dependent DNA helicase recG C-terminal RGna_RS12130 PF00119 ATP synthase A chain RGna_RS12135 PF00137 ATP synthase subunit C RGna_RS12140 PF00430 ATP synthase B/B' CF(0) RGna_RS12145 PF00213 ATP synthase delta (OSCP) subunit RGna_RS12150 PF02874 ATP synthase alpha/beta family, beta-barrel domain RGna_RS12150 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain RGna_RS12150 PF00306 ATP synthase alpha/beta chain, C terminal domain RGna_RS12155 PF00231 ATP synthase RGna_RS12160 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain RGna_RS12160 PF02874 ATP synthase alpha/beta family, beta-barrel domain RGna_RS12175 PF01680 SOR/SNZ family RGna_RS12180 PF01174 SNO glutamine amidotransferase family RGna_RS12185 PF01053 Cys/Met metabolism PLP-dependent enzyme RGna_RS12195 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain RGna_RS12195 PF07992 Pyridine nucleotide-disulphide oxidoreductase RGna_RS12205 PF03063 Prismane/CO dehydrogenase family RGna_RS12215 PF00356 Bacterial regulatory proteins, lacI family RGna_RS12220 PF00294 pfkB family carbohydrate kinase RGna_RS12225 PF05025 RbsD / FucU transport protein family RGna_RS12230 PF00005 ABC transporter RGna_RS12235 PF02653 Branched-chain amino acid transport system / permease component RGna_RS12240 PF13407 Periplasmic binding protein domain RGna_RS12260 PF00005 ABC transporter RGna_RS12260 PF00664 ABC transporter transmembrane region RGna_RS12285 PF00271 Helicase conserved C-terminal domain RGna_RS12285 PF09382 RQC domain RGna_RS12285 PF16124 RecQ zinc-binding RGna_RS12285 PF00570 HRDC domain RGna_RS12285 PF00270 DEAD/DEAH box helicase RGna_RS12295 PF04304 Protein of unknown function (DUF454) RGna_RS12300 PF11756 Nitrous oxide-stimulated promoter RGna_RS12305 PF00664 ABC transporter transmembrane region RGna_RS12305 PF00005 ABC transporter RGna_RS12310 PF00664 ABC transporter transmembrane region RGna_RS12310 PF00005 ABC transporter RGna_RS12325 PF03551 Transcriptional regulator PadR-like family RGna_RS12340 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain RGna_RS12340 PF01276 Orn/Lys/Arg decarboxylase, major domain RGna_RS12345 PF17284 Spermidine synthase tetramerisation domain RGna_RS12350 PF00491 Arginase family RGna_RS12355 PF16653 Saccharopine dehydrogenase C-terminal domain RGna_RS12355 PF03435 Saccharopine dehydrogenase NADP binding domain RGna_RS12360 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain RGna_RS12365 PF07992 Pyridine nucleotide-disulphide oxidoreductase RGna_RS12365 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster RGna_RS12375 PF00171 Aldehyde dehydrogenase family RGna_RS12400 PF14480 DNA polymerase III polC-type N-terminus I RGna_RS12400 PF11490 DNA polymerase III polC-type N-terminus II RGna_RS12400 PF07733 Bacterial DNA polymerase III alpha NTPase domain RGna_RS12400 PF17657 Bacterial DNA polymerase III alpha subunit finger domain RGna_RS12400 PF14579 Helix-hairpin-helix motif RGna_RS12400 PF02811 PHP domain RGna_RS12400 PF01336 OB-fold nucleic acid binding domain RGna_RS12400 PF00929 Exonuclease RGna_RS12435 PF00156 Phosphoribosyl transferase domain RGna_RS12440 PF13419 Haloacid dehalogenase-like hydrolase RGna_RS12445 PF09335 SNARE associated Golgi protein RGna_RS12450 PF13439 Glycosyltransferase Family 4 RGna_RS12450 PF00534 Glycosyl transferases group 1 RGna_RS12460 PF00072 Response regulator receiver domain RGna_RS12460 PF00486 Transcriptional regulatory protein, C terminal RGna_RS12465 PF00512 His Kinase A (phospho-acceptor) domain RGna_RS12465 PF00989 PAS fold RGna_RS12465 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RGna_RS12465 PF16736 Single Cache-like RGna_RS12485 PF02311 AraC-like ligand binding domain RGna_RS12485 PF12833 Helix-turn-helix domain RGna_RS12495 PF00664 ABC transporter transmembrane region RGna_RS12495 PF00005 ABC transporter RGna_RS12510 PF12631 MnmE helical domain RGna_RS12510 PF10396 GTP-binding protein TrmE N-terminus RGna_RS12510 PF01926 50S ribosome-binding GTPase RGna_RS12520 PF06968 Biotin and Thiamin Synthesis associated domain RGna_RS12520 PF04055 Radical SAM superfamily RGna_RS12525 PF00708 Acylphosphatase RGna_RS12530 PF03807 NADP oxidoreductase coenzyme F420-dependent RGna_RS12530 PF14748 Pyrroline-5-carboxylate reductase dimerisation RGna_RS12535 PF06463 Molybdenum Cofactor Synthesis C RGna_RS12535 PF04055 Radical SAM superfamily RGna_RS12545 PF00528 Binding-protein-dependent transport system inner membrane component RGna_RS12550 PF00528 Binding-protein-dependent transport system inner membrane component RGna_RS12555 PF12833 Helix-turn-helix domain RGna_RS12555 PF10114 Sensory domain found in PocR RGna_RS12560 PF06580 Histidine kinase RGna_RS12560 PF00672 HAMP domain RGna_RS12560 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RGna_RS12560 PF02743 Cache domain RGna_RS12570 PF03477 ATP cone domain RGna_RS12570 PF13597 Anaerobic ribonucleoside-triphosphate reductase RGna_RS12575 PF07992 Pyridine nucleotide-disulphide oxidoreductase RGna_RS12585 PF01648 4'-phosphopantetheinyl transferase superfamily RGna_RS12590 PF02557 D-alanyl-D-alanine carboxypeptidase RGna_RS12600 PF01966 HD domain RGna_RS12600 PF13286 Phosphohydrolase-associated domain RGna_RS12610 PF14437 MafB19-like deaminase RGna_RS12625 PF00730 HhH-GPD superfamily base excision DNA repair protein RGna_RS12625 PF00633 Helix-hairpin-helix motif RGna_RS12635 PF01037 Lrp/AsnC ligand binding domain RGna_RS12640 PF00155 Aminotransferase class I and II RGna_RS12645 PF00588 SpoU rRNA Methylase family RGna_RS12650 PF00294 pfkB family carbohydrate kinase RGna_RS12660 PF01496 V-type ATPase 116kDa subunit family RGna_RS12665 PF00137 ATP synthase subunit C RGna_RS12720 PF01497 Periplasmic binding protein RGna_RS12725 PF01032 FecCD transport family RGna_RS12730 PF00005 ABC transporter RGna_RS12735 PF01636 Phosphotransferase enzyme family RGna_RS12740 PF01408 Oxidoreductase family, NAD-binding Rossmann fold RGna_RS12740 PF02894 Oxidoreductase family, C-terminal alpha/beta domain RGna_RS12745 PF12852 Cupin RGna_RS12745 PF12833 Helix-turn-helix domain RGna_RS12760 PF01202 Shikimate kinase RGna_RS12765 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) RGna_RS12775 PF00438 S-adenosylmethionine synthetase, N-terminal domain RGna_RS12775 PF02772 S-adenosylmethionine synthetase, central domain RGna_RS12775 PF02773 S-adenosylmethionine synthetase, C-terminal domain RGna_RS12780 PF00989 PAS fold RGna_RS12780 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RGna_RS12780 PF16736 Single Cache-like RGna_RS12780 PF00512 His Kinase A (phospho-acceptor) domain RGna_RS12785 PF00072 Response regulator receiver domain RGna_RS12785 PF00486 Transcriptional regulatory protein, C terminal RGna_RS12790 PF02386 Cation transport protein RGna_RS12795 PF02254 TrkA-N domain RGna_RS12795 PF02080 TrkA-C domain RGna_RS12800 PF08032 RNA 2'-O ribose methyltransferase substrate binding RGna_RS12800 PF00588 SpoU rRNA Methylase family RGna_RS12805 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain RGna_RS12805 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain RGna_RS12810 PF08279 HTH domain RGna_RS12810 PF03099 Biotin/lipoate A/B protein ligase family RGna_RS12810 PF02237 Biotin protein ligase C terminal domain RGna_RS12820 PF01207 Dihydrouridine synthase (Dus) RGna_RS12825 PF03449 Transcription elongation factor, N-terminal RGna_RS12825 PF01272 Transcription elongation factor, GreA/GreB, C-term RGna_RS12830 PF01336 OB-fold nucleic acid binding domain RGna_RS12830 PF00152 tRNA synthetases class II (D, K and N) RGna_RS12845 PF13614 AAA domain RGna_RS12855 PF03830 PTS system sorbose subfamily IIB component RGna_RS12860 PF03609 PTS system sorbose-specific iic component RGna_RS12865 PF03613 PTS system mannose/fructose/sorbose family IID component RGna_RS12870 PF00923 Transaldolase/Fructose-6-phosphate aldolase RGna_RS12875 PF00465 Iron-containing alcohol dehydrogenase RGna_RS12890 PF03358 NADPH-dependent FMN reductase RGna_RS12920 PF13556 PucR C-terminal helix-turn-helix domain RGna_RS12920 PF17853 GGDEF-like domain RGna_RS12920 PF06018 CodY GAF-like domain RGna_RS12925 PF10502 Signal peptidase, peptidase S26 RGna_RS12935 PF04203 Sortase domain RGna_RS12950 PF00072 Response regulator receiver domain RGna_RS12960 PF18267 Rubredoxin NAD+ reductase C-terminal domain RGna_RS12960 PF07992 Pyridine nucleotide-disulphide oxidoreductase RGna_RS12960 PF04324 BFD-like [2Fe-2S] binding domain RGna_RS12960 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain RGna_RS12960 PF01077 Nitrite and sulphite reductase 4Fe-4S domain RGna_RS12990 PF02920 DNA binding domain of tn916 integrase RGna_RS12990 PF00589 Phage integrase family RGna_RS13035 PF00128 Alpha amylase, catalytic domain RGna_RS13075 PF00365 Phosphofructokinase RGna_RS13080 PF00535 Glycosyl transferase family 2 RGna_RS13085 PF02915 Rubrerythrin RGna_RS13090 PF00082 Subtilase family RGna_RS13125 PF01813 ATP synthase subunit D RGna_RS13130 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain RGna_RS13130 PF02874 ATP synthase alpha/beta family, beta-barrel domain RGna_RS13135 PF16886 ATPsynthase alpha/beta subunit N-term extension RGna_RS13135 PF02874 ATP synthase alpha/beta family, beta-barrel domain RGna_RS13135 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain RGna_RS13155 PF01496 V-type ATPase 116kDa subunit family RGna_RS13175 PF02390 Putative methyltransferase RGna_RS13180 PF00085 Thioredoxin RGna_RS13190 PF12833 Helix-turn-helix domain RGna_RS13190 PF00072 Response regulator receiver domain RGna_RS13205 PF00356 Bacterial regulatory proteins, lacI family RGna_RS13215 PF00456 Transketolase, thiamine diphosphate binding domain RGna_RS13220 PF02780 Transketolase, C-terminal domain RGna_RS13220 PF02779 Transketolase, pyrimidine binding domain RGna_RS13225 PF02782 FGGY family of carbohydrate kinases, C-terminal domain RGna_RS13225 PF00370 FGGY family of carbohydrate kinases, N-terminal domain RGna_RS13235 PF01554 MatE RGna_RS13260 PF13614 AAA domain RGna_RS13265 PF17762 HTH domain found in ParB protein RGna_RS13265 PF02195 ParB-like nuclease domain RGna_RS13395 PF00436 Single-strand binding protein family RGna_RS13455 PF13936 Helix-turn-helix domain RGna_RS13475 PF11700 Vacuole effluxer Atg22 like RGna_RS13480 PF02127 Aminopeptidase I zinc metalloprotease (M18) RGna_RS13485 PF00486 Transcriptional regulatory protein, C terminal RGna_RS13485 PF00072 Response regulator receiver domain RGna_RS13490 PF00672 HAMP domain RGna_RS13490 PF00512 His Kinase A (phospho-acceptor) domain RGna_RS13490 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RGna_RS13500 PF00293 NUDIX domain RGna_RS13505 PF03006 Haemolysin-III related RGna_RS13510 PF00270 DEAD/DEAH box helicase RGna_RS13510 PF00271 Helicase conserved C-terminal domain RGna_RS13540 PF04986 Putative transposase RGna_RS13540 PF14319 Transposase zinc-binding domain RGna_RS13545 PF00589 Phage integrase family RGna_RS13545 PF02899 Phage integrase, N-terminal SAM-like domain RGna_RS13560 PF00696 Amino acid kinase family RGna_RS13570 PF00005 ABC transporter RGna_RS13570 PF00664 ABC transporter transmembrane region RGna_RS13575 PF00005 ABC transporter RGna_RS13575 PF00664 ABC transporter transmembrane region RGna_RS13585 PF00005 ABC transporter RGna_RS13590 PF12679 ABC-2 family transporter protein RGna_RS13600 PF03477 ATP cone domain RGna_RS13605 PF01416 tRNA pseudouridine synthase RGna_RS13610 PF03372 Endonuclease/Exonuclease/phosphatase family RGna_RS13615 PF07683 Cobalamin synthesis protein cobW C-terminal domain RGna_RS13615 PF02492 CobW/HypB/UreG, nucleotide-binding domain RGna_RS13625 PF00294 pfkB family carbohydrate kinase RGna_RS13645 PF00572 Ribosomal protein L13 RGna_RS13650 PF00380 Ribosomal protein S9/S16 RGna_RS13660 PF13614 AAA domain RGna_RS13665 PF17762 HTH domain found in ParB protein RGna_RS13665 PF02195 ParB-like nuclease domain RGna_RS13685 PF10548 P22AR C-terminal domain RGna_RS13685 PF02498 BRO family, N-terminal domain RGna_RS13740 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) RGna_RS13740 PF01348 Type II intron maturase RGna_RS13770 PF03389 MobA/MobL family RGna_RS13770 PF17841 BID domain of Bartonella effector protein (Bep) RGna_RS13770 PF01443 Viral (Superfamily 1) RNA helicase RGna_RS13775 PF01807 CHC2 zinc finger RGna_RS13775 PF08278 DNA primase DnaG DnaB-binding RGna_RS13775 PF08275 DNA primase catalytic core, N-terminal domain RGna_RS13775 PF10410 DnaB-helicase binding domain of primase RGna_RS13855 PF01751 Toprim domain RGna_RS13855 PF01131 DNA topoisomerase RGna_RS13865 PF08275 DNA primase catalytic core, N-terminal domain RGna_RS13865 PF01807 CHC2 zinc finger RGna_RS13885 PF01348 Type II intron maturase RGna_RS13885 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) RGna_RS13935 PF03432 Relaxase/Mobilisation nuclease domain RGna_RS13950 PF00072 Response regulator receiver domain RGna_RS13950 PF00486 Transcriptional regulatory protein, C terminal RGna_RS13955 PF00672 HAMP domain RGna_RS13955 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RGna_RS13955 PF00989 PAS fold RGna_RS13955 PF00512 His Kinase A (phospho-acceptor) domain RGna_RS13955 PF18698 Histidine kinase sensor domain RGna_RS13975 PF00005 ABC transporter RGna_RS14005 PF00072 Response regulator receiver domain RGna_RS14005 PF00486 Transcriptional regulatory protein, C terminal RGna_RS14010 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RGna_RS14015 PF00005 ABC transporter RGna_RS14060 PF17761 DUF1016 N-terminal domain RGna_RS14060 PF06250 YhcG PDDEXK nuclease domain RGna_RS14080 PF03466 LysR substrate binding domain RGna_RS14080 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RGna_RS14085 PF07992 Pyridine nucleotide-disulphide oxidoreductase RGna_RS14090 PF03601 Conserved hypothetical protein 698 RGna_RS14105 PF18801 response regulator aspartate phosphatase H, N terminal RGna_RS14120 PF06968 Biotin and Thiamin Synthesis associated domain RGna_RS14120 PF04055 Radical SAM superfamily RGna_RS14130 PF00710 Asparaginase, N-terminal RGna_RS14130 PF17763 Glutaminase/Asparaginase C-terminal domain RGna_RS14150 PF00571 CBS domain RGna_RS14150 PF01595 Cyclin M transmembrane N-terminal domain RGna_RS14150 PF03471 Transporter associated domain RGna_RS14160 PF02142 MGS-like domain RGna_RS14160 PF01808 AICARFT/IMPCHase bienzyme RGna_RS14165 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE RGna_RS14170 PF00814 Glycoprotease family RGna_RS14180 PF12706 Beta-lactamase superfamily domain RGna_RS14185 PF00814 Glycoprotease family RGna_RS14190 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase RGna_RS14295 PF00849 RNA pseudouridylate synthase RGna_RS14300 PF17674 HHH domain RGna_RS14300 PF00575 S1 RNA binding domain RGna_RS14300 PF09371 Tex-like protein N-terminal domain RGna_RS14300 PF16921 Tex protein YqgF-like domain RGna_RS14305 PF02441 Flavoprotein RGna_RS14305 PF04127 DNA / pantothenate metabolism flavoprotein RGna_RS14310 PF12822 ECF transporter, substrate-specific component RGna_RS14315 PF03309 Type III pantothenate kinase RGna_RS14320 PF12822 ECF transporter, substrate-specific component RGna_RS14325 PF01554 MatE RGna_RS14345 PF01471 Putative peptidoglycan binding domain RGna_RS14345 PF07486 Cell Wall Hydrolase RGna_RS14350 PF01751 Toprim domain RGna_RS14350 PF01131 DNA topoisomerase RGna_RS14355 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) RGna_RS14355 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 RGna_RS14360 PF03952 Enolase, N-terminal domain RGna_RS14360 PF00113 Enolase, C-terminal TIM barrel domain RGna_RS14370 PF00005 ABC transporter RGna_RS14380 PF00874 PRD domain RGna_RS14380 PF03123 CAT RNA binding domain RGna_RS14385 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 RGna_RS14385 PF00367 phosphotransferase system, EIIB RGna_RS14385 PF02378 Phosphotransferase system, EIIC RGna_RS14390 PF00232 Glycosyl hydrolase family 1 RGna_RS14400 PF03840 Preprotein translocase SecG subunit RGna_RS14405 PF17876 Cold shock domain RGna_RS14405 PF00773 RNB domain RGna_RS14405 PF00575 S1 RNA binding domain RGna_RS14405 PF08206 Ribonuclease B OB domain RGna_RS14410 PF01668 SmpB protein RGna_RS14425 PF10114 Sensory domain found in PocR RGna_RS14425 PF12833 Helix-turn-helix domain RGna_RS14440 PF00370 FGGY family of carbohydrate kinases, N-terminal domain RGna_RS14440 PF02782 FGGY family of carbohydrate kinases, C-terminal domain RGna_RS14445 PF08532 Beta-galactosidase trimerisation domain RGna_RS14445 PF08533 Beta-galactosidase C-terminal domain RGna_RS14445 PF02449 Beta-galactosidase RGna_RS14450 PF08244 Glycosyl hydrolases family 32 C terminal RGna_RS14450 PF00251 Glycosyl hydrolases family 32 N-terminal domain RGna_RS14455 PF02378 Phosphotransferase system, EIIC RGna_RS14455 PF00367 phosphotransferase system, EIIB RGna_RS14460 PF00933 Glycosyl hydrolase family 3 N terminal domain RGna_RS14460 PF01915 Glycosyl hydrolase family 3 C-terminal domain RGna_RS14460 PF14310 Fibronectin type III-like domain RGna_RS14475 PF00528 Binding-protein-dependent transport system inner membrane component RGna_RS14510 PF00589 Phage integrase family RGna_RS14510 PF14659 Phage integrase, N-terminal SAM-like domain RGna_RS14515 PF14319 Transposase zinc-binding domain RGna_RS14515 PF04986 Putative transposase RGna_RS14520 PF02899 Phage integrase, N-terminal SAM-like domain RGna_RS14520 PF00589 Phage integrase family RGna_RS14525 PF04069 Substrate binding domain of ABC-type glycine betaine transport system RGna_RS14530 PF00571 CBS domain RGna_RS14530 PF00005 ABC transporter RGna_RS14550 PF00005 ABC transporter RGna_RS14560 PF00486 Transcriptional regulatory protein, C terminal RGna_RS14560 PF00072 Response regulator receiver domain RGna_RS14565 PF00672 HAMP domain RGna_RS14565 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RGna_RS14565 PF18698 Histidine kinase sensor domain RGna_RS14565 PF00512 His Kinase A (phospho-acceptor) domain RGna_RS14565 PF00989 PAS fold RGna_RS14570 PF00117 Glutamine amidotransferase class-I RGna_RS14575 PF00977 Histidine biosynthesis protein RGna_RS14580 PF03167 Uracil DNA glycosylase superfamily RGna_RS14590 PF00005 ABC transporter RGna_RS14600 PF12704 MacB-like periplasmic core domain RGna_RS14600 PF02687 FtsX-like permease family RGna_RS14615 PF00072 Response regulator receiver domain RGna_RS14615 PF00196 Bacterial regulatory proteins, luxR family RGna_RS14620 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RGna_RS14620 PF07730 Histidine kinase RGna_RS14625 PF00005 ABC transporter RGna_RS14640 PF00733 Asparagine synthase RGna_RS14640 PF13537 Glutamine amidotransferase domain RGna_RS14645 PF00310 Glutamine amidotransferases class-II RGna_RS14645 PF01493 GXGXG motif RGna_RS14645 PF01645 Conserved region in glutamate synthase RGna_RS14645 PF04898 Glutamate synthase central domain RGna_RS14650 PF07992 Pyridine nucleotide-disulphide oxidoreductase RGna_RS14650 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster RGna_RS14655 PF00120 Glutamine synthetase, catalytic domain RGna_RS14655 PF03951 Glutamine synthetase, beta-Grasp domain RGna_RS14665 PF00155 Aminotransferase class I and II RGna_RS14670 PF04607 Region found in RelA / SpoT proteins RGna_RS14680 PF02311 AraC-like ligand binding domain RGna_RS14680 PF12833 Helix-turn-helix domain RGna_RS14690 PF07470 Glycosyl Hydrolase Family 88 RGna_RS14695 PF03830 PTS system sorbose subfamily IIB component RGna_RS14700 PF03609 PTS system sorbose-specific iic component RGna_RS14705 PF03613 PTS system mannose/fructose/sorbose family IID component RGna_RS14715 PF00356 Bacterial regulatory proteins, lacI family RGna_RS14730 PF12833 Helix-turn-helix domain RGna_RS14735 PF02836 Glycosyl hydrolases family 2, TIM barrel domain RGna_RS14735 PF16355 Domain of unknown function (DUF4982) RGna_RS14735 PF02837 Glycosyl hydrolases family 2, sugar binding domain RGna_RS14735 PF18565 Glycoside hydrolase family 2 C-terminal domain 5 RGna_RS14735 PF00703 Glycosyl hydrolases family 2 RGna_RS14745 PF00072 Response regulator receiver domain RGna_RS14745 PF00486 Transcriptional regulatory protein, C terminal RGna_RS14750 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RGna_RS14750 PF00672 HAMP domain RGna_RS14750 PF00512 His Kinase A (phospho-acceptor) domain RGna_RS14750 PF13426 PAS domain RGna_RS14755 PF00403 Heavy-metal-associated domain RGna_RS14760 PF01022 Bacterial regulatory protein, arsR family RGna_RS14765 PF00403 Heavy-metal-associated domain RGna_RS14775 PF06962 Putative rRNA methylase RGna_RS14780 PF02683 Cytochrome C biogenesis protein transmembrane region RGna_RS14785 PF13167 GTP-binding GTPase N-terminal RGna_RS14785 PF16360 GTP-binding GTPase Middle Region RGna_RS14785 PF01926 50S ribosome-binding GTPase RGna_RS14790 PF01638 HxlR-like helix-turn-helix RGna_RS14800 PF01717 Cobalamin-independent synthase, Catalytic domain RGna_RS14805 PF00936 BMC domain RGna_RS14815 PF13291 ACT domain RGna_RS14815 PF04607 Region found in RelA / SpoT proteins RGna_RS14815 PF02824 TGS domain RGna_RS14825 PF10114 Sensory domain found in PocR RGna_RS14825 PF12833 Helix-turn-helix domain RGna_RS14835 PF01381 Helix-turn-helix RGna_RS14845 PF10114 Sensory domain found in PocR RGna_RS14845 PF12833 Helix-turn-helix domain RGna_RS14850 PF04962 KduI/IolB family RGna_RS14855 PF00106 short chain dehydrogenase RGna_RS14865 PF03480 Bacterial extracellular solute-binding protein, family 7 RGna_RS14870 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component RGna_RS14875 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component RGna_RS14880 PF12833 Helix-turn-helix domain RGna_RS14885 PF07470 Glycosyl Hydrolase Family 88 RGna_RS14890 PF02782 FGGY family of carbohydrate kinases, C-terminal domain RGna_RS14890 PF00370 FGGY family of carbohydrate kinases, N-terminal domain RGna_RS14895 PF06134 L-rhamnose isomerase (RhaA) RGna_RS14900 PF02311 AraC-like ligand binding domain RGna_RS14900 PF12833 Helix-turn-helix domain RGna_RS14905 PF17137 Domain of unknown function (DUF5110) RGna_RS14905 PF01055 Glycosyl hydrolases family 31 RGna_RS14905 PF16338 Domain of unknown function (DUF4968) RGna_RS14910 PF03480 Bacterial extracellular solute-binding protein, family 7 RGna_RS14915 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component RGna_RS14920 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component RGna_RS14925 PF16338 Domain of unknown function (DUF4968) RGna_RS14925 PF13802 Galactose mutarotase-like RGna_RS14925 PF01055 Glycosyl hydrolases family 31 RGna_RS14925 PF17137 Domain of unknown function (DUF5110) RGna_RS14935 PF02811 PHP domain RGna_RS14945 PF04055 Radical SAM superfamily RGna_RS14955 PF03928 Haem-degrading RGna_RS14960 PF00171 Aldehyde dehydrogenase family RGna_RS14965 PF08240 Alcohol dehydrogenase GroES-like domain RGna_RS14965 PF00107 Zinc-binding dehydrogenase RGna_RS14975 PF00936 BMC domain RGna_RS14985 PF00936 BMC domain RGna_RS14990 PF06130 Phosphate propanoyltransferase RGna_RS14995 PF03319 Ethanolamine utilisation protein EutN/carboxysome RGna_RS15000 PF10531 SLBB domain RGna_RS15000 PF13375 RnfC Barrel sandwich hybrid domain RGna_RS15000 PF13237 4Fe-4S dicluster domain RGna_RS15000 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit RGna_RS15010 PF08220 DeoR-like helix-turn-helix domain RGna_RS15010 PF00455 DeoR C terminal sensor domain RGna_RS15015 PF00465 Iron-containing alcohol dehydrogenase RGna_RS15025 PF12833 Helix-turn-helix domain RGna_RS15030 PF00005 ABC transporter RGna_RS15035 PF02653 Branched-chain amino acid transport system / permease component RGna_RS15040 PF02653 Branched-chain amino acid transport system / permease component RGna_RS15050 PF00370 FGGY family of carbohydrate kinases, N-terminal domain RGna_RS15050 PF02782 FGGY family of carbohydrate kinases, C-terminal domain RGna_RS15055 PF05336 L-rhamnose mutarotase RGna_RS15060 PF12833 Helix-turn-helix domain RGna_RS15065 PF03786 D-mannonate dehydratase (UxuA) RGna_RS15075 PF02614 Glucuronate isomerase RGna_RS15080 PF09339 IclR helix-turn-helix domain RGna_RS15080 PF01614 Bacterial transcriptional regulator RGna_RS15085 PF01081 KDPG and KHG aldolase RGna_RS15095 PF01116 Fructose-bisphosphate aldolase class-II RGna_RS15100 PF00356 Bacterial regulatory proteins, lacI family RGna_RS15105 PF00370 FGGY family of carbohydrate kinases, N-terminal domain RGna_RS15105 PF02782 FGGY family of carbohydrate kinases, C-terminal domain RGna_RS15110 PF00107 Zinc-binding dehydrogenase RGna_RS15110 PF08240 Alcohol dehydrogenase GroES-like domain RGna_RS15115 PF00294 pfkB family carbohydrate kinase RGna_RS15120 PF00248 Aldo/keto reductase family RGna_RS15135 PF02378 Phosphotransferase system, EIIC RGna_RS15135 PF00367 phosphotransferase system, EIIB RGna_RS15135 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 RGna_RS15145 PF02743 Cache domain RGna_RS15145 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RGna_RS15145 PF06580 Histidine kinase RGna_RS15145 PF00672 HAMP domain RGna_RS15155 PF02653 Branched-chain amino acid transport system / permease component RGna_RS15160 PF00005 ABC transporter RGna_RS15165 PF02653 Branched-chain amino acid transport system / permease component RGna_RS15180 PF12833 Helix-turn-helix domain RGna_RS15185 PF00370 FGGY family of carbohydrate kinases, N-terminal domain RGna_RS15185 PF02782 FGGY family of carbohydrate kinases, C-terminal domain RGna_RS15190 PF07882 L-fucose isomerase, second N-terminal domain RGna_RS15190 PF02952 L-fucose isomerase, C-terminal domain RGna_RS15190 PF07881 L-fucose isomerase, first N-terminal domain RGna_RS15195 PF05025 RbsD / FucU transport protein family RGna_RS15200 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase RGna_RS15205 PF08264 Anticodon-binding domain of tRNA RGna_RS15205 PF00133 tRNA synthetases class I (I, L, M and V) RGna_RS15205 PF10458 Valyl tRNA synthetase tRNA binding arm RGna_RS15215 PF08245 Mur ligase middle domain RGna_RS15215 PF02875 Mur ligase family, glutamate ligase domain RGna_RS15225 PF01740 STAS domain RGna_RS15230 PF13581 Histidine kinase-like ATPase domain RGna_RS15235 PF04542 Sigma-70 region 2 RGna_RS15235 PF04545 Sigma-70, region 4 RGna_RS15235 PF04539 Sigma-70 region 3 RGna_RS15245 PF12164 Stage V sporulation protein AA RGna_RS15255 PF00107 Zinc-binding dehydrogenase RGna_RS15255 PF08240 Alcohol dehydrogenase GroES-like domain RGna_RS15260 PF02492 CobW/HypB/UreG, nucleotide-binding domain RGna_RS15260 PF07683 Cobalamin synthesis protein cobW C-terminal domain RGna_RS15265 PF03862 SpoVAC/SpoVAEB sporulation membrane protein RGna_RS15280 PF02690 Na+/Pi-cotransporter RGna_RS15285 PF12849 PBP superfamily domain RGna_RS15290 PF00528 Binding-protein-dependent transport system inner membrane component RGna_RS15295 PF00528 Binding-protein-dependent transport system inner membrane component RGna_RS15300 PF00005 ABC transporter RGna_RS15305 PF01895 PhoU domain RGna_RS15310 PF00486 Transcriptional regulatory protein, C terminal RGna_RS15310 PF00072 Response regulator receiver domain RGna_RS15315 PF16736 Single Cache-like RGna_RS15315 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RGna_RS15315 PF00512 His Kinase A (phospho-acceptor) domain RGna_RS15315 PF00989 PAS fold RGna_RS15320 PF12833 Helix-turn-helix domain RGna_RS15325 PF01678 Diaminopimelate epimerase RGna_RS15330 PF00392 Bacterial regulatory proteins, gntR family RGna_RS15335 PF10431 C-terminal, D2-small domain, of ClpB protein RGna_RS15335 PF02861 Clp amino terminal domain, pathogenicity island component RGna_RS15335 PF17871 AAA lid domain RGna_RS15335 PF07724 AAA domain (Cdc48 subfamily) RGna_RS15335 PF00004 ATPase family associated with various cellular activities (AAA) RGna_RS15345 PF18073 Rubredoxin metal binding domain RGna_RS15395 PF00111 2Fe-2S iron-sulfur cluster binding domain RGna_RS15395 PF01799 [2Fe-2S] binding domain RGna_RS15400 PF01799 [2Fe-2S] binding domain RGna_RS15400 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain RGna_RS15400 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase RGna_RS15435 PF02901 Pyruvate formate lyase-like RGna_RS15435 PF01228 Glycine radical RGna_RS15440 PF04055 Radical SAM superfamily RGna_RS15445 PF00301 Rubredoxin RGna_RS15455 PF01047 MarR family RGna_RS15460 PF00005 ABC transporter RGna_RS15460 PF00664 ABC transporter transmembrane region RGna_RS15465 PF00664 ABC transporter transmembrane region RGna_RS15465 PF00005 ABC transporter RGna_RS15470 PF01967 MoaC family RGna_RS15475 PF00994 Probable molybdopterin binding domain RGna_RS15480 PF04055 Radical SAM superfamily RGna_RS15480 PF06463 Molybdenum Cofactor Synthesis C RGna_RS15495 PF04452 RNA methyltransferase RGna_RS15500 PF00266 Aminotransferase class-V RGna_RS15505 PF02568 Thiamine biosynthesis protein (ThiI) RGna_RS15505 PF02926 THUMP domain RGna_RS15515 PF00919 Uncharacterized protein family UPF0004 RGna_RS15515 PF04055 Radical SAM superfamily RGna_RS15515 PF01938 TRAM domain RGna_RS15520 PF06135 IreB regulatory phosphoprotein RGna_RS15525 PF03652 Holliday junction resolvase RGna_RS15535 PF01475 Ferric uptake regulator family RGna_RS15540 PF17770 Ribonuclease J C-terminal domain RGna_RS15540 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain RGna_RS15540 PF00753 Metallo-beta-lactamase superfamily RGna_RS15555 PF04545 Sigma-70, region 4 RGna_RS15555 PF04542 Sigma-70 region 2 RGna_RS15560 PF01078 Magnesium chelatase, subunit ChlI RGna_RS15560 PF13335 Magnesium chelatase, subunit ChlI C-terminal RGna_RS15565 PF17782 DprA winged helix domain RGna_RS15565 PF02481 DNA recombination-mediator protein A RGna_RS15570 PF01396 Topoisomerase DNA binding C4 zinc finger RGna_RS15570 PF01751 Toprim domain RGna_RS15570 PF01131 DNA topoisomerase RGna_RS15655 PF10609 NUBPL iron-transfer P-loop NTPase RGna_RS15680 PF00436 Single-strand binding protein family RGna_RS15705 PF03354 Phage Terminase RGna_RS15820 PF01471 Putative peptidoglycan binding domain RGna_RS15820 PF01510 N-acetylmuramoyl-L-alanine amidase RGna_RS15835 PF13936 Helix-turn-helix domain RGna_RS15840 PF08222 CodY helix-turn-helix domain RGna_RS15840 PF06018 CodY GAF-like domain RGna_RS15850 PF00166 Chaperonin 10 Kd subunit RGna_RS15855 PF00118 TCP-1/cpn60 chaperonin family RGna_RS15860 PF00571 CBS domain RGna_RS15860 PF00478 IMP dehydrogenase / GMP reductase domain RGna_RS15865 PF01510 N-acetylmuramoyl-L-alanine amidase RGna_RS15865 PF01471 Putative peptidoglycan binding domain RGna_RS15870 PF01202 Shikimate kinase RGna_RS15880 PF09285 Elongation factor P, C-terminal RGna_RS15880 PF01132 Elongation factor P (EF-P) OB domain RGna_RS15880 PF08207 Elongation factor P (EF-P) KOW-like domain RGna_RS15900 PF00005 ABC transporter RGna_RS15905 PF00392 Bacterial regulatory proteins, gntR family RGna_RS15910 PF01261 Xylose isomerase-like TIM barrel RGna_RS15915 PF00750 tRNA synthetases class I (R) RGna_RS15915 PF03485 Arginyl tRNA synthetase N terminal domain RGna_RS15915 PF05746 DALR anticodon binding domain RGna_RS15920 PF01411 tRNA synthetases class II (A) RGna_RS15920 PF02272 DHHA1 domain RGna_RS15920 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain RGna_RS15925 PF02517 CPBP intramembrane metalloprotease RGna_RS15930 PF00437 Type II/IV secretion system protein RGna_RS15955 PF01476 LysM domain RGna_RS15955 PF00877 NlpC/P60 family RGna_RS15960 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily RGna_RS15965 PF00318 Ribosomal protein S2 RGna_RS15970 PF00889 Elongation factor TS RGna_RS15990 PF04973 Nicotinamide mononucleotide transporter RGna_RS15995 PF00294 pfkB family carbohydrate kinase RGna_RS16000 PF03747 ADP-ribosylglycohydrolase RGna_RS16005 PF00392 Bacterial regulatory proteins, gntR family RGna_RS16005 PF07702 UTRA domain RGna_RS16010 PF13638 PIN domain RGna_RS16010 PF02562 PhoH-like protein RGna_RS16015 PF13089 Polyphosphate kinase N-terminal domain RGna_RS16015 PF02503 Polyphosphate kinase middle domain RGna_RS16015 PF17941 Polyphosphate kinase C-terminal domain 1 RGna_RS16015 PF13090 Polyphosphate kinase C-terminal domain 2 RGna_RS16025 PF00485 Phosphoribulokinase / Uridine kinase family RGna_RS16030 PF01544 CorA-like Mg2+ transporter protein RGna_RS16045 PF00356 Bacterial regulatory proteins, lacI family RGna_RS16055 PF00251 Glycosyl hydrolases family 32 N-terminal domain RGna_RS16055 PF08244 Glycosyl hydrolases family 32 C terminal RGna_RS16060 PF00860 Permease family RGna_RS16065 PF00696 Amino acid kinase family RGna_RS16070 PF01042 Endoribonuclease L-PSP RGna_RS16075 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain RGna_RS16075 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain RGna_RS16080 PF07687 Peptidase dimerisation domain RGna_RS16080 PF01546 Peptidase family M20/M25/M40 RGna_RS16085 PF00291 Pyridoxal-phosphate dependent enzyme RGna_RS16095 PF01979 Amidohydrolase family RGna_RS16100 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster RGna_RS16100 PF07992 Pyridine nucleotide-disulphide oxidoreductase RGna_RS16110 PF02625 XdhC and CoxI family RGna_RS16110 PF13478 XdhC Rossmann domain RGna_RS16115 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain RGna_RS16115 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase RGna_RS16125 PF00528 Binding-protein-dependent transport system inner membrane component RGna_RS16130 PF00005 ABC transporter RGna_RS16130 PF17845 FbpC C-terminal regulatory nucleotide binding domain RGna_RS16170 PF01381 Helix-turn-helix RGna_RS16240 PF05866 Endodeoxyribonuclease RusA RGna_RS16440 PF02811 PHP domain RGna_RS16445 PF01371 Trp repressor protein RGna_RS16460 PF00580 UvrD/REP helicase N-terminal domain RGna_RS16460 PF13361 UvrD-like helicase C-terminal domain RGna_RS16470 PF05958 tRNA (Uracil-5-)-methyltransferase RGna_RS16490 PF00664 ABC transporter transmembrane region RGna_RS16490 PF00005 ABC transporter RGna_RS16505 PF00005 ABC transporter RGna_RS16515 PF00005 ABC transporter RGna_RS16595 PF00072 Response regulator receiver domain RGna_RS16595 PF00486 Transcriptional regulatory protein, C terminal RGna_RS16600 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RGna_RS16600 PF00512 His Kinase A (phospho-acceptor) domain RGna_RS16615 PF00005 ABC transporter RGna_RS16615 PF13732 Domain of unknown function (DUF4162) RGna_RS16635 PF02796 Helix-turn-helix domain of resolvase RGna_RS16635 PF00239 Resolvase, N terminal domain RGna_RS16660 PF09704 CRISPR-associated protein (Cas_Cas5) RGna_RS16680 PF01867 CRISPR associated protein Cas1 RGna_RS16685 PF09827 CRISPR associated protein Cas2 RGna_RS16695 PF03707 Bacterial signalling protein N terminal repeat RGna_RS16695 PF00990 Diguanylate cyclase, GGDEF domain RGna_RS16695 PF00563 EAL domain RGna_RS16705 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RGna_RS16705 PF00672 HAMP domain RGna_RS16705 PF00512 His Kinase A (phospho-acceptor) domain RGna_RS16710 PF00005 ABC transporter RGna_RS16740 PF08534 Redoxin RGna_RS16750 PF12801 4Fe-4S binding domain RGna_RS16750 PF04205 FMN-binding domain RGna_RS16765 PF01979 Amidohydrolase family RGna_RS16770 PF01769 Divalent cation transporter RGna_RS16770 PF03448 MgtE intracellular N domain RGna_RS16770 PF00571 CBS domain RGna_RS16775 PF13649 Methyltransferase domain RGna_RS16780 PF01430 Hsp33 protein RGna_RS16785 PF00795 Carbon-nitrogen hydrolase RGna_RS16785 PF02540 NAD synthase RGna_RS16795 PF13478 XdhC Rossmann domain RGna_RS16795 PF02625 XdhC and CoxI family RGna_RS16800 PF01979 Amidohydrolase family RGna_RS16805 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase RGna_RS16805 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain RGna_RS16810 PF00941 FAD binding domain in molybdopterin dehydrogenase RGna_RS16810 PF03450 CO dehydrogenase flavoprotein C-terminal domain RGna_RS16815 PF00111 2Fe-2S iron-sulfur cluster binding domain RGna_RS16815 PF01799 [2Fe-2S] binding domain RGna_RS16830 PF01475 Ferric uptake regulator family RGna_RS16845 PF17910 FeoB cytosolic helical domain RGna_RS16845 PF07664 Ferrous iron transport protein B C terminus RGna_RS16845 PF02421 Ferrous iron transport protein B RGna_RS16845 PF07670 Nucleoside recognition RGna_RS16875 PF02229 Transcriptional Coactivator p15 (PC4) RGna_RS16880 PF02195 ParB-like nuclease domain RGna_RS16880 PF17762 HTH domain found in ParB protein RGna_RS16885 PF01076 Plasmid recombination enzyme RGna_RS16925 PF00009 Elongation factor Tu GTP binding domain RGna_RS16925 PF00679 Elongation factor G C-terminus RGna_RS16925 PF14492 Elongation Factor G, domain II RGna_RS16925 PF03764 Elongation factor G, domain IV RGna_RS16950 PF01554 MatE RGna_RS16955 PF01915 Glycosyl hydrolase family 3 C-terminal domain RGna_RS16955 PF00933 Glycosyl hydrolase family 3 N terminal domain RGna_RS16955 PF14310 Fibronectin type III-like domain RGna_RS16980 PF00486 Transcriptional regulatory protein, C terminal RGna_RS16980 PF00072 Response regulator receiver domain RGna_RS16995 PF01522 Polysaccharide deacetylase RGna_RS17005 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain RGna_RS17005 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain RGna_RS17010 PF08501 Shikimate dehydrogenase substrate binding domain RGna_RS17010 PF18317 Shikimate 5'-dehydrogenase C-terminal domain RGna_RS17015 PF01761 3-dehydroquinate synthase RGna_RS17020 PF00793 DAHP synthetase I family RGna_RS17020 PF18152 DAHP synthase ferredoxin-like domain RGna_RS17025 PF00654 Voltage gated chloride channel RGna_RS17035 PF01765 Ribosome recycling factor RGna_RS17040 PF01255 Putative undecaprenyl diphosphate synthase RGna_RS17050 PF13288 DXP reductoisomerase C-terminal domain RGna_RS17050 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase RGna_RS17050 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain RGna_RS17055 PF02163 Peptidase family M50 RGna_RS17055 PF17820 PDZ domain RGna_RS17060 PF01510 N-acetylmuramoyl-L-alanine amidase RGna_RS17060 PF01471 Putative peptidoglycan binding domain RGna_RS17065 PF03788 LrgA family RGna_RS17070 PF04172 LrgB-like family RGna_RS17080 PF00155 Aminotransferase class I and II RGna_RS17080 PF00392 Bacterial regulatory proteins, gntR family RGna_RS17085 PF00117 Glutamine amidotransferase class-I RGna_RS17085 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain RGna_RS17090 PF02142 MGS-like domain RGna_RS17090 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain RGna_RS17090 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain RGna_RS17095 PF12833 Helix-turn-helix domain RGna_RS17100 PF01547 Bacterial extracellular solute-binding protein RGna_RS17105 PF00528 Binding-protein-dependent transport system inner membrane component RGna_RS17115 PF00528 Binding-protein-dependent transport system inner membrane component RGna_RS17120 PF16875 Glycosyl hydrolase family 36 N-terminal domain RGna_RS17120 PF00485 Phosphoribulokinase / Uridine kinase family RGna_RS17120 PF16874 Glycosyl hydrolase family 36 C-terminal domain RGna_RS17125 PF16875 Glycosyl hydrolase family 36 N-terminal domain RGna_RS17125 PF16874 Glycosyl hydrolase family 36 C-terminal domain RGna_RS17130 PF12833 Helix-turn-helix domain RGna_RS17130 PF02311 AraC-like ligand binding domain RGna_RS17135 PF00005 ABC transporter RGna_RS17135 PF08239 Bacterial SH3 domain RGna_RS17150 PF12897 Alanine-glyoxylate amino-transferase RGna_RS17155 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) RGna_RS17155 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 RGna_RS17165 PF02769 AIR synthase related protein, C-terminal domain RGna_RS17165 PF00586 AIR synthase related protein, N-terminal domain RGna_RS17175 PF00266 Aminotransferase class-V RGna_RS17185 PF00905 Penicillin binding protein transpeptidase domain RGna_RS17185 PF00912 Transglycosylase RGna_RS17190 PF09186 Domain of unknown function (DUF1949) RGna_RS17190 PF01205 Uncharacterized protein family UPF0029 RGna_RS17195 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein RGna_RS17195 PF16321 Sigma 54 modulation/S30EA ribosomal protein C terminus RGna_RS17215 PF00701 Dihydrodipicolinate synthetase family RGna_RS17220 PF05173 Dihydrodipicolinate reductase, C-terminus RGna_RS17220 PF01113 Dihydrodipicolinate reductase, N-terminus RGna_RS17225 PF06874 Firmicute fructose-1,6-bisphosphatase RGna_RS17230 PF03979 Sigma-70 factor, region 1.1 RGna_RS17230 PF04545 Sigma-70, region 4 RGna_RS17230 PF04539 Sigma-70 region 3 RGna_RS17230 PF04542 Sigma-70 region 2 RGna_RS17230 PF00140 Sigma-70 factor, region 1.2 RGna_RS17240 PF00977 Histidine biosynthesis protein RGna_RS17245 PF07516 SecA Wing and Scaffold domain RGna_RS17245 PF01043 SecA preprotein cross-linking domain RGna_RS17245 PF02810 SEC-C motif RGna_RS17245 PF07517 SecA DEAD-like domain RGna_RS17255 PF03447 Homoserine dehydrogenase, NAD binding domain RGna_RS17255 PF00742 Homoserine dehydrogenase RGna_RS17255 PF01842 ACT domain RGna_RS17260 PF01676 Metalloenzyme superfamily RGna_RS17260 PF10143 2,3-bisphosphoglycerate-independent phosphoglycerate mutase RGna_RS17265 PF13840 ACT domain RGna_RS17265 PF00696 Amino acid kinase family RGna_RS17285 PF05698 Bacterial trigger factor protein (TF) C-terminus RGna_RS17285 PF05697 Bacterial trigger factor protein (TF) RGna_RS17285 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase RGna_RS17290 PF00574 Clp protease RGna_RS17295 PF06689 ClpX C4-type zinc finger RGna_RS17295 PF07724 AAA domain (Cdc48 subfamily) RGna_RS17295 PF10431 C-terminal, D2-small domain, of ClpB protein RGna_RS17300 PF05362 Lon protease (S16) C-terminal proteolytic domain RGna_RS17300 PF00004 ATPase family associated with various cellular activities (AAA) RGna_RS17300 PF02190 ATP-dependent protease La (LON) substrate-binding domain RGna_RS17305 PF01926 50S ribosome-binding GTPase RGna_RS17315 PF01964 Radical SAM ThiC family RGna_RS17325 PF00486 Transcriptional regulatory protein, C terminal RGna_RS17325 PF00072 Response regulator receiver domain RGna_RS17330 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RGna_RS17330 PF00512 His Kinase A (phospho-acceptor) domain RGna_RS17330 PF00989 PAS fold RGna_RS17330 PF16736 Single Cache-like RGna_RS17335 PF00005 ABC transporter RGna_RS17335 PF12704 MacB-like periplasmic core domain RGna_RS17335 PF02687 FtsX-like permease family RGna_RS17365 PF00005 ABC transporter RGna_RS17380 PF00072 Response regulator receiver domain RGna_RS17380 PF00486 Transcriptional regulatory protein, C terminal RGna_RS17385 PF00512 His Kinase A (phospho-acceptor) domain RGna_RS17390 PF00465 Iron-containing alcohol dehydrogenase RGna_RS17395 PF00258 Flavodoxin RGna_RS17395 PF00753 Metallo-beta-lactamase superfamily RGna_RS17400 PF03063 Prismane/CO dehydrogenase family RGna_RS17410 PF17761 DUF1016 N-terminal domain RGna_RS17410 PF06250 YhcG PDDEXK nuclease domain RGna_RS17415 PF00271 Helicase conserved C-terminal domain RGna_RS17415 PF04851 Type III restriction enzyme, res subunit RGna_RS17415 PF02151 UvrB/uvrC motif RGna_RS17415 PF12344 Ultra-violet resistance protein B RGna_RS17415 PF17757 UvrB interaction domain RGna_RS17420 PF17755 UvrA DNA-binding domain RGna_RS17420 PF17760 UvrA interaction domain RGna_RS17430 PF13538 UvrD-like helicase C-terminal domain RGna_RS17430 PF18335 ATP-dependent RecD-like DNA helicase SH3 domain RGna_RS17430 PF14490 Helix-hairpin-helix containing domain RGna_RS17435 PF00156 Phosphoribosyl transferase domain RGna_RS17450 PF02457 DisA bacterial checkpoint controller nucleotide-binding RGna_RS17460 PF00381 PTS HPr component phosphorylation site RGna_RS17470 PF00884 Sulfatase RGna_RS17475 PF00535 Glycosyl transferase family 2 RGna_RS17480 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase RGna_RS17485 PF16363 GDP-mannose 4,6 dehydratase RGna_RS17490 PF00483 Nucleotidyl transferase RGna_RS17495 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase RGna_RS17500 PF01061 ABC-2 type transporter RGna_RS17505 PF00005 ABC transporter RGna_RS17515 PF00535 Glycosyl transferase family 2 RGna_RS17530 PF04321 RmlD substrate binding domain RGna_RS17540 PF00534 Glycosyl transferases group 1 RGna_RS17540 PF13439 Glycosyltransferase Family 4 RGna_RS17545 PF00535 Glycosyl transferase family 2 RGna_RS17550 PF02397 Bacterial sugar transferase RGna_RS17565 PF00535 Glycosyl transferase family 2 RGna_RS17570 PF03816 Cell envelope-related transcriptional attenuator domain RGna_RS17580 PF01380 SIS domain RGna_RS17585 PF13180 PDZ domain RGna_RS17590 PF00589 Phage integrase family RGna_RS17590 PF02920 DNA binding domain of tn916 integrase RGna_RS17595 PF09035 Excisionase from transposon Tn916 RGna_RS17615 PF00486 Transcriptional regulatory protein, C terminal RGna_RS17615 PF00072 Response regulator receiver domain RGna_RS17620 PF00005 ABC transporter RGna_RS17630 PF00512 His Kinase A (phospho-acceptor) domain RGna_RS17630 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RGna_RS17655 PF00877 NlpC/P60 family