locus-tag class description DW349_RS00010 PF00712 DNA polymerase III beta subunit, N-terminal domain DW349_RS00010 PF02767 DNA polymerase III beta subunit, central domain DW349_RS00010 PF02768 DNA polymerase III beta subunit, C-terminal domain DW349_RS00015 PF02463 RecF/RecN/SMC N terminal domain DW349_RS00020 PF00986 DNA gyrase B subunit, carboxyl terminus DW349_RS00020 PF18053 DNA gyrase B subunit insert domain DW349_RS00020 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DW349_RS00020 PF01751 Toprim domain DW349_RS00020 PF00204 DNA gyrase B DW349_RS00025 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain DW349_RS00030 PF08534 Redoxin DW349_RS00035 PF09308 LuxQ, periplasmic DW349_RS00035 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DW349_RS00035 PF00072 Response regulator receiver domain DW349_RS00035 PF00512 His Kinase A (phospho-acceptor) domain DW349_RS00040 PF00990 Diguanylate cyclase, GGDEF domain DW349_RS00050 PF00085 Thioredoxin DW349_RS00050 PF01323 DSBA-like thioredoxin domain DW349_RS00055 PF00034 Cytochrome c DW349_RS00060 PF01926 50S ribosome-binding GTPase DW349_RS00070 PF00731 AIR carboxylase DW349_RS00075 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain DW349_RS00075 PF02222 ATP-grasp domain DW349_RS00085 PF01554 MatE DW349_RS00090 PF02790 Cytochrome C oxidase subunit II, transmembrane domain DW349_RS00090 PF00116 Cytochrome C oxidase subunit II, periplasmic domain DW349_RS00095 PF00115 Cytochrome C and Quinol oxidase polypeptide I DW349_RS00100 PF00510 Cytochrome c oxidase subunit III DW349_RS00120 PF02628 Cytochrome oxidase assembly protein DW349_RS00125 PF01040 UbiA prenyltransferase family DW349_RS00130 PF02630 SCO1/SenC DW349_RS00135 PF04235 Protein of unknown function (DUF418) DW349_RS00140 PF01497 Periplasmic binding protein DW349_RS00145 PF00561 alpha/beta hydrolase fold DW349_RS00150 PF02580 D-Tyr-tRNA(Tyr) deacylase DW349_RS00155 PF00563 EAL domain DW349_RS00155 PF03707 Bacterial signalling protein N terminal repeat DW349_RS00155 PF00990 Diguanylate cyclase, GGDEF domain DW349_RS00165 PF00958 GMP synthase C terminal domain DW349_RS00165 PF00117 Glutamine amidotransferase class-I DW349_RS00170 PF03466 LysR substrate binding domain DW349_RS00170 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DW349_RS00175 PF04219 Protein of unknown function, DUF DW349_RS00180 PF05736 OprF membrane domain DW349_RS00180 PF00691 OmpA family DW349_RS00185 PF01037 Lrp/AsnC ligand binding domain DW349_RS00200 PF07715 TonB-dependent Receptor Plug Domain DW349_RS00200 PF00593 TonB dependent receptor DW349_RS00205 PF00072 Response regulator receiver domain DW349_RS00205 PF04703 FaeA-like protein DW349_RS00210 PF17203 Single cache domain 3 DW349_RS00210 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain DW349_RS00210 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DW349_RS00210 PF00989 PAS fold DW349_RS00225 PF01970 Tripartite tricarboxylate transporter TctA family DW349_RS00240 PF03006 Haemolysin-III related DW349_RS00250 PF00356 Bacterial regulatory proteins, lacI family DW349_RS00255 PF00294 pfkB family carbohydrate kinase DW349_RS00265 PF02627 Carboxymuconolactone decarboxylase family DW349_RS00280 PF00072 Response regulator receiver domain DW349_RS00280 PF00486 Transcriptional regulatory protein, C terminal DW349_RS00285 PF00512 His Kinase A (phospho-acceptor) domain DW349_RS00285 PF00672 HAMP domain DW349_RS00285 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DW349_RS00295 PF00149 Calcineurin-like phosphoesterase DW349_RS00295 PF02872 5'-nucleotidase, C-terminal domain DW349_RS00305 PF00692 dUTPase DW349_RS00310 PF02441 Flavoprotein DW349_RS00310 PF04127 DNA / pantothenate metabolism flavoprotein DW349_RS00315 PF04002 RadC-like JAB domain DW349_RS00320 PF00830 Ribosomal L28 family DW349_RS00325 PF00471 Ribosomal protein L33 DW349_RS00330 PF01209 ubiE/COQ5 methyltransferase family DW349_RS00335 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain DW349_RS00335 PF06827 Zinc finger found in FPG and IleRS DW349_RS00335 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain DW349_RS00340 PF01243 Pyridoxamine 5'-phosphate oxidase DW349_RS00340 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region DW349_RS00345 PF01266 FAD dependent oxidoreductase DW349_RS00355 PF09411 Lipid A 3-O-deacylase (PagL) DW349_RS00365 PF02769 AIR synthase related protein, C-terminal domain DW349_RS00365 PF00586 AIR synthase related protein, N-terminal domain DW349_RS00370 PF17674 HHH domain DW349_RS00370 PF09371 Tex-like protein N-terminal domain DW349_RS00370 PF16921 Tex protein YqgF-like domain DW349_RS00370 PF00575 S1 RNA binding domain DW349_RS00375 PF04262 Glutamate-cysteine ligase DW349_RS00390 PF04353 Regulator of RNA polymerase sigma(70) subunit, Rsd/AlgQ DW349_RS00415 PF00005 ABC transporter DW349_RS00415 PF12848 ABC transporter DW349_RS00420 PF00574 Clp protease DW349_RS00425 PF07497 Rho termination factor, RNA-binding domain DW349_RS00425 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain DW349_RS00425 PF07498 Rho termination factor, N-terminal domain DW349_RS00430 PF00085 Thioredoxin DW349_RS00435 PF00490 Delta-aminolevulinic acid dehydratase DW349_RS00440 PF01209 ubiE/COQ5 methyltransferase family DW349_RS00450 PF03109 ABC1 family DW349_RS00455 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase DW349_RS00460 PF02416 mttA/Hcf106 family DW349_RS00465 PF02416 mttA/Hcf106 family DW349_RS00470 PF00902 Sec-independent protein translocase protein (TatC) DW349_RS00485 PF03480 Bacterial extracellular solute-binding protein, family 7 DW349_RS00495 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component DW349_RS00495 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component DW349_RS00500 PF01202 Shikimate kinase DW349_RS00505 PF00356 Bacterial regulatory proteins, lacI family DW349_RS00505 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family DW349_RS00530 PF02687 FtsX-like permease family DW349_RS00530 PF00005 ABC transporter DW349_RS00530 PF12704 MacB-like periplasmic core domain DW349_RS00545 PF01258 Prokaryotic dksA/traR C4-type zinc finger DW349_RS00550 PF06983 3-demethylubiquinone-9 3-methyltransferase DW349_RS00560 PF03795 YCII-related domain DW349_RS00565 PF04542 Sigma-70 region 2 DW349_RS00565 PF08281 Sigma-70, region 4 DW349_RS00575 PF00132 Bacterial transferase hexapeptide (six repeats) DW349_RS00580 PF02541 Ppx/GppA phosphatase family DW349_RS00585 PF02503 Polyphosphate kinase middle domain DW349_RS00585 PF13090 Polyphosphate kinase C-terminal domain 2 DW349_RS00585 PF17941 Polyphosphate kinase C-terminal domain 1 DW349_RS00585 PF13089 Polyphosphate kinase N-terminal domain DW349_RS00590 PF00156 Phosphoribosyl transferase domain DW349_RS00595 PF00186 Dihydrofolate reductase DW349_RS00605 PF00578 AhpC/TSA family DW349_RS00605 PF10417 C-terminal domain of 1-Cys peroxiredoxin DW349_RS00615 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DW349_RS00615 PF00672 HAMP domain DW349_RS00615 PF02743 Cache domain DW349_RS00625 PF00072 Response regulator receiver domain DW349_RS00625 PF00486 Transcriptional regulatory protein, C terminal DW349_RS00630 PF00072 Response regulator receiver domain DW349_RS00635 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DW349_RS00635 PF02895 Signal transducing histidine kinase, homodimeric domain DW349_RS00635 PF01627 Hpt domain DW349_RS00635 PF01584 CheW-like domain DW349_RS00635 PF09078 CheY binding DW349_RS00640 PF01584 CheW-like domain DW349_RS00645 PF00672 HAMP domain DW349_RS00645 PF02203 Tar ligand binding domain homologue DW349_RS00645 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DW349_RS00650 PF01739 CheR methyltransferase, SAM binding domain DW349_RS00650 PF03705 CheR methyltransferase, all-alpha domain DW349_RS00655 PF03975 CheD chemotactic sensory transduction DW349_RS00660 PF00072 Response regulator receiver domain DW349_RS00660 PF01339 CheB methylesterase DW349_RS00665 PF00072 Response regulator receiver domain DW349_RS00665 PF02954 Bacterial regulatory protein, Fis family DW349_RS00665 PF00158 Sigma-54 interaction domain DW349_RS00670 PF05195 Aminopeptidase P, N-terminal domain DW349_RS00670 PF00557 Metallopeptidase family M24 DW349_RS00675 PF03695 Uncharacterised protein family (UPF0149) DW349_RS00685 PF05164 Cell division protein ZapA DW349_RS00695 PF01812 5-formyltetrahydrofolate cyclo-ligase family DW349_RS00705 PF02698 DUF218 domain DW349_RS00710 PF00005 ABC transporter DW349_RS00715 PF00583 Acetyltransferase (GNAT) family DW349_RS00720 PF02222 ATP-grasp domain DW349_RS00725 PF09308 LuxQ, periplasmic DW349_RS00725 PF00512 His Kinase A (phospho-acceptor) domain DW349_RS00725 PF00072 Response regulator receiver domain DW349_RS00725 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DW349_RS00740 PF02074 Carboxypeptidase Taq (M32) metallopeptidase DW349_RS00745 PF00814 Glycoprotease family DW349_RS00745 PF00583 Acetyltransferase (GNAT) family DW349_RS00755 PF00583 Acetyltransferase (GNAT) family DW349_RS00780 PF00580 UvrD/REP helicase N-terminal domain DW349_RS00780 PF13361 UvrD-like helicase C-terminal domain DW349_RS00790 PF13693 Winged helix-turn-helix DNA-binding DW349_RS00795 PF03707 Bacterial signalling protein N terminal repeat DW349_RS00795 PF00563 EAL domain DW349_RS00795 PF00990 Diguanylate cyclase, GGDEF domain DW349_RS00810 PF02743 Cache domain DW349_RS00810 PF00672 HAMP domain DW349_RS00810 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DW349_RS00815 PF00672 HAMP domain DW349_RS00815 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DW349_RS00815 PF12729 Four helix bundle sensory module for signal transduction DW349_RS00820 PF00672 HAMP domain DW349_RS00820 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DW349_RS00820 PF12729 Four helix bundle sensory module for signal transduction DW349_RS00830 PF00474 Sodium:solute symporter family DW349_RS00835 PF00571 CBS domain DW349_RS00845 PF13411 MerR HTH family regulatory protein DW349_RS00855 PF13614 AAA domain DW349_RS00860 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DW349_RS00860 PF00672 HAMP domain DW349_RS00860 PF02743 Cache domain DW349_RS00865 PF00072 Response regulator receiver domain DW349_RS00875 PF09078 CheY binding DW349_RS00875 PF02895 Signal transducing histidine kinase, homodimeric domain DW349_RS00875 PF01627 Hpt domain DW349_RS00875 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DW349_RS00875 PF01584 CheW-like domain DW349_RS00880 PF00672 HAMP domain DW349_RS00880 PF16591 Helical bimodular sensor domain DW349_RS00880 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DW349_RS00885 PF01584 CheW-like domain DW349_RS00890 PF01739 CheR methyltransferase, SAM binding domain DW349_RS00890 PF03705 CheR methyltransferase, all-alpha domain DW349_RS00895 PF03975 CheD chemotactic sensory transduction DW349_RS00900 PF01339 CheB methylesterase DW349_RS00900 PF00072 Response regulator receiver domain DW349_RS00915 PF00005 ABC transporter DW349_RS00915 PF00664 ABC transporter transmembrane region DW349_RS00935 PF00248 Aldo/keto reductase family DW349_RS00940 PF17862 AAA+ lid domain DW349_RS00940 PF01434 Peptidase family M41 DW349_RS00940 PF00004 ATPase family associated with various cellular activities (AAA) DW349_RS00950 PF01613 Flavin reductase like domain DW349_RS00955 PF00881 Nitroreductase family DW349_RS00960 PF00561 alpha/beta hydrolase fold DW349_RS00965 PF01042 Endoribonuclease L-PSP DW349_RS00970 PF00857 Isochorismatase family DW349_RS00975 PF00296 Luciferase-like monooxygenase DW349_RS00980 PF00440 Bacterial regulatory proteins, tetR family DW349_RS00980 PF08362 YcdC-like protein, C-terminal region DW349_RS00990 PF02253 Phospholipase A1 DW349_RS00995 PF00557 Metallopeptidase family M24 DW349_RS01000 PF00005 ABC transporter DW349_RS01000 PF08402 TOBE domain DW349_RS01005 PF00528 Binding-protein-dependent transport system inner membrane component DW349_RS01010 PF13416 Bacterial extracellular solute-binding protein DW349_RS01020 PF01810 LysE type translocator DW349_RS01025 PF03466 LysR substrate binding domain DW349_RS01025 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DW349_RS01050 PF00528 Binding-protein-dependent transport system inner membrane component DW349_RS01055 PF00497 Bacterial extracellular solute-binding proteins, family 3 DW349_RS01060 PF00158 Sigma-54 interaction domain DW349_RS01060 PF00072 Response regulator receiver domain DW349_RS01060 PF02954 Bacterial regulatory protein, Fis family DW349_RS01065 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DW349_RS01065 PF00512 His Kinase A (phospho-acceptor) domain DW349_RS01065 PF00497 Bacterial extracellular solute-binding proteins, family 3 DW349_RS01080 PF18030 RimK PreATP-grasp domain DW349_RS01080 PF08443 RimK-like ATP-grasp domain DW349_RS01085 PF03448 MgtE intracellular N domain DW349_RS01085 PF01769 Divalent cation transporter DW349_RS01085 PF00571 CBS domain DW349_RS01095 PF01678 Diaminopimelate epimerase DW349_RS01100 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain DW349_RS01100 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain DW349_RS01115 PF09335 SNARE associated Golgi protein DW349_RS01120 PF00156 Phosphoribosyl transferase domain DW349_RS01130 PF08361 MAATS-type transcriptional repressor, C-terminal region DW349_RS01130 PF00440 Bacterial regulatory proteins, tetR family DW349_RS01135 PF12146 Serine aminopeptidase, S33 DW349_RS01140 PF01078 Magnesium chelatase, subunit ChlI DW349_RS01140 PF13335 Magnesium chelatase, subunit ChlI C-terminal DW349_RS01145 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain DW349_RS01145 PF00205 Thiamine pyrophosphate enzyme, central domain DW349_RS01145 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain DW349_RS01160 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DW349_RS01160 PF03466 LysR substrate binding domain DW349_RS01170 PF13460 NAD(P)H-binding DW349_RS01175 PF08495 FIST N domain DW349_RS01175 PF10442 FIST C domain DW349_RS01175 PF00990 Diguanylate cyclase, GGDEF domain DW349_RS01175 PF00563 EAL domain DW349_RS01180 PF01541 GIY-YIG catalytic domain DW349_RS01185 PF00149 Calcineurin-like phosphoesterase DW349_RS01185 PF02872 5'-nucleotidase, C-terminal domain DW349_RS01190 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain DW349_RS01190 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain DW349_RS01190 PF01842 ACT domain DW349_RS01195 PF01547 Bacterial extracellular solute-binding protein DW349_RS01200 PF01557 Fumarylacetoacetate (FAA) hydrolase family DW349_RS01210 PF00497 Bacterial extracellular solute-binding proteins, family 3 DW349_RS01220 PF01022 Bacterial regulatory protein, arsR family DW349_RS01230 PF00877 NlpC/P60 family DW349_RS01240 PF01134 Glucose inhibited division protein A DW349_RS01240 PF13932 GidA associated domain DW349_RS01245 PF02527 rRNA small subunit methyltransferase G DW349_RS01250 PF13614 AAA domain DW349_RS01255 PF02195 ParB-like nuclease domain DW349_RS01255 PF17762 HTH domain found in ParB protein DW349_RS01265 PF00119 ATP synthase A chain DW349_RS01270 PF00137 ATP synthase subunit C DW349_RS01275 PF00430 ATP synthase B/B' CF(0) DW349_RS01280 PF00213 ATP synthase delta (OSCP) subunit DW349_RS01285 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain DW349_RS01285 PF02874 ATP synthase alpha/beta family, beta-barrel domain DW349_RS01285 PF00306 ATP synthase alpha/beta chain, C terminal domain DW349_RS01290 PF00231 ATP synthase DW349_RS01295 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain DW349_RS01295 PF02874 ATP synthase alpha/beta family, beta-barrel domain DW349_RS01300 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain DW349_RS01300 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain DW349_RS01305 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DW349_RS01305 PF03466 LysR substrate binding domain DW349_RS01315 PF08003 Protein of unknown function (DUF1698) DW349_RS01320 PF13649 Methyltransferase domain DW349_RS01325 PF00009 Elongation factor Tu GTP binding domain DW349_RS01325 PF03144 Elongation factor Tu domain 2 DW349_RS01325 PF16658 Class II release factor RF3, C-terminal domain DW349_RS01335 PF00572 Ribosomal protein L13 DW349_RS01340 PF00380 Ribosomal protein S9/S16 DW349_RS01345 PF10399 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal DW349_RS01345 PF00355 Rieske [2Fe-2S] domain DW349_RS01350 PF00033 Cytochrome b/b6/petB DW349_RS01350 PF00032 Cytochrome b(C-terminal)/b6/petD DW349_RS01355 PF02167 Cytochrome C1 family DW349_RS01360 PF02798 Glutathione S-transferase, N-terminal domain DW349_RS01360 PF00043 Glutathione S-transferase, C-terminal domain DW349_RS01365 PF04386 Stringent starvation protein B DW349_RS01395 PF13442 Cytochrome C oxidase, cbb3-type, subunit III DW349_RS01400 PF00990 Diguanylate cyclase, GGDEF domain DW349_RS01400 PF00072 Response regulator receiver domain DW349_RS01405 PF13409 Glutathione S-transferase, N-terminal domain DW349_RS01410 PF01790 Prolipoprotein diacylglyceryl transferase DW349_RS01415 PF00303 Thymidylate synthase DW349_RS01420 PF13654 AAA domain DW349_RS01420 PF05362 Lon protease (S16) C-terminal proteolytic domain DW349_RS01425 PF13193 AMP-binding enzyme C-terminal domain DW349_RS01425 PF00501 AMP-binding enzyme DW349_RS01425 PF16177 Acetyl-coenzyme A synthetase N-terminus DW349_RS01435 PF00196 Bacterial regulatory proteins, luxR family DW349_RS01435 PF00072 Response regulator receiver domain DW349_RS01440 PF01627 Hpt domain DW349_RS01440 PF00512 His Kinase A (phospho-acceptor) domain DW349_RS01440 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DW349_RS01440 PF00672 HAMP domain DW349_RS01440 PF00072 Response regulator receiver domain DW349_RS01445 PF00762 Ferrochelatase DW349_RS01460 PF12706 Beta-lactamase superfamily domain DW349_RS01465 PF01430 Hsp33 protein DW349_RS01470 PF01479 S4 domain DW349_RS01475 PF00459 Inositol monophosphatase family DW349_RS01490 PF00293 NUDIX domain DW349_RS01495 PF01590 GAF domain DW349_RS01495 PF02896 PEP-utilising enzyme, TIM barrel domain DW349_RS01495 PF05524 PEP-utilising enzyme, N-terminal DW349_RS01495 PF00391 PEP-utilising enzyme, mobile domain DW349_RS01500 PF00563 EAL domain DW349_RS01500 PF00990 Diguanylate cyclase, GGDEF domain DW349_RS01500 PF00360 Phytochrome region DW349_RS01500 PF01590 GAF domain DW349_RS01510 PF00580 UvrD/REP helicase N-terminal domain DW349_RS01510 PF13361 UvrD-like helicase C-terminal domain DW349_RS01515 PF00005 ABC transporter DW349_RS01530 PF01699 Sodium/calcium exchanger protein DW349_RS01565 PF07726 ATPase family associated with various cellular activities (AAA) DW349_RS01565 PF17863 AAA lid domain DW349_RS01570 PF01882 Protein of unknown function DUF58 DW349_RS01585 PF07584 Aerotolerance regulator N-terminal DW349_RS01585 PF13519 von Willebrand factor type A domain DW349_RS01595 PF01627 Hpt domain DW349_RS01595 PF00512 His Kinase A (phospho-acceptor) domain DW349_RS01595 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DW349_RS01595 PF00672 HAMP domain DW349_RS01595 PF17149 Periplasmic sensor domain found in signal transduction proteins DW349_RS01595 PF00072 Response regulator receiver domain DW349_RS01600 PF00679 Elongation factor G C-terminus DW349_RS01600 PF00009 Elongation factor Tu GTP binding domain DW349_RS01600 PF03144 Elongation factor Tu domain 2 DW349_RS01610 PF00585 C-terminal regulatory domain of Threonine dehydratase DW349_RS01610 PF00291 Pyridoxal-phosphate dependent enzyme DW349_RS01615 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) DW349_RS01630 PF01022 Bacterial regulatory protein, arsR family DW349_RS01640 PF00355 Rieske [2Fe-2S] domain DW349_RS01665 PF01370 NAD dependent epimerase/dehydratase family DW349_RS01670 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III DW349_RS01670 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal DW349_RS01675 PF04073 Aminoacyl-tRNA editing domain DW349_RS01690 PF13533 Biotin-lipoyl like DW349_RS01705 PF02311 AraC-like ligand binding domain DW349_RS01705 PF12833 Helix-turn-helix domain DW349_RS01710 PF00583 Acetyltransferase (GNAT) family DW349_RS01715 PF16527 Two-component sensor protein CpxA, periplasmic domain DW349_RS01715 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DW349_RS01715 PF00512 His Kinase A (phospho-acceptor) domain DW349_RS01715 PF00672 HAMP domain DW349_RS01720 PF00486 Transcriptional regulatory protein, C terminal DW349_RS01720 PF00072 Response regulator receiver domain DW349_RS01725 PF01713 Smr domain DW349_RS01740 PF00202 Aminotransferase class-III DW349_RS01745 PF03653 Uncharacterised protein family (UPF0093) DW349_RS01750 PF00654 Voltage gated chloride channel DW349_RS01765 PF01521 Iron-sulphur cluster biosynthesis DW349_RS01775 PF01551 Peptidase family M23 DW349_RS01775 PF04225 Opacity-associated protein A LysM-like domain DW349_RS01780 PF00579 tRNA synthetases class I (W and Y) DW349_RS01780 PF01479 S4 domain DW349_RS01810 PF00266 Aminotransferase class-V DW349_RS01820 PF01189 16S rRNA methyltransferase RsmB/F DW349_RS01820 PF01029 NusB family DW349_RS01825 PF00106 short chain dehydrogenase DW349_RS01830 PF13091 PLD-like domain DW349_RS01830 PF13396 Phospholipase_D-nuclease N-terminal DW349_RS01845 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase DW349_RS01860 PF00563 EAL domain DW349_RS01860 PF03707 Bacterial signalling protein N terminal repeat DW349_RS01860 PF00990 Diguanylate cyclase, GGDEF domain DW349_RS01865 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DW349_RS01865 PF00672 HAMP domain DW349_RS01865 PF02743 Cache domain DW349_RS01880 PF00561 alpha/beta hydrolase fold DW349_RS01885 PF03951 Glutamine synthetase, beta-Grasp domain DW349_RS01885 PF00120 Glutamine synthetase, catalytic domain DW349_RS01895 PF01638 HxlR-like helix-turn-helix DW349_RS01900 PF05368 NmrA-like family DW349_RS01915 PF03951 Glutamine synthetase, beta-Grasp domain DW349_RS01915 PF00120 Glutamine synthetase, catalytic domain DW349_RS01925 PF12697 Alpha/beta hydrolase family DW349_RS01930 PF03992 Antibiotic biosynthesis monooxygenase DW349_RS01935 PF08021 Siderophore-interacting FAD-binding domain DW349_RS01935 PF04954 Siderophore-interacting protein DW349_RS01970 PF01209 ubiE/COQ5 methyltransferase family DW349_RS01980 PF04461 Protein of unknown function (DUF520) DW349_RS02010 PF00171 Aldehyde dehydrogenase family DW349_RS02030 PF12399 Branched-chain amino acid ATP-binding cassette transporter DW349_RS02030 PF00005 ABC transporter DW349_RS02035 PF00005 ABC transporter DW349_RS02040 PF00171 Aldehyde dehydrogenase family DW349_RS02045 PF15975 Flotillin DW349_RS02045 PF01145 SPFH domain / Band 7 family DW349_RS02050 PF00672 HAMP domain DW349_RS02050 PF17200 Single Cache domain 2 DW349_RS02050 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DW349_RS02055 PF02811 PHP domain DW349_RS02070 PF00356 Bacterial regulatory proteins, lacI family DW349_RS02075 PF00753 Metallo-beta-lactamase superfamily DW349_RS02075 PF12706 Beta-lactamase superfamily domain DW349_RS02080 PF00528 Binding-protein-dependent transport system inner membrane component DW349_RS02085 PF00528 Binding-protein-dependent transport system inner membrane component DW349_RS02110 PF00561 alpha/beta hydrolase fold DW349_RS02130 PF02678 Pirin DW349_RS02130 PF05726 Pirin C-terminal cupin domain DW349_RS02135 PF03466 LysR substrate binding domain DW349_RS02135 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DW349_RS02140 PF08379 Bacterial transglutaminase-like N-terminal region DW349_RS02140 PF01841 Transglutaminase-like superfamily DW349_RS02145 PF04174 A circularly permuted ATPgrasp DW349_RS02150 PF10005 zinc-ribbon domain DW349_RS02150 PF15887 Putative zinc-binding metallo-peptidase DW349_RS02155 PF14403 Circularly permuted ATP-grasp type 2 DW349_RS02190 PF13302 Acetyltransferase (GNAT) domain DW349_RS02210 PF04055 Radical SAM superfamily DW349_RS02215 PF08125 Mannitol dehydrogenase C-terminal domain DW349_RS02215 PF01232 Mannitol dehydrogenase Rossmann domain DW349_RS02220 PF13378 Enolase C-terminal domain-like DW349_RS02220 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain DW349_RS02225 PF02614 Glucuronate isomerase DW349_RS02230 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component DW349_RS02240 PF03480 Bacterial extracellular solute-binding protein, family 7 DW349_RS02245 PF07729 FCD domain DW349_RS02245 PF00392 Bacterial regulatory proteins, gntR family DW349_RS02250 PF00294 pfkB family carbohydrate kinase DW349_RS02255 PF00672 HAMP domain DW349_RS02255 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DW349_RS02255 PF02743 Cache domain DW349_RS02260 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DW349_RS02260 PF17200 Single Cache domain 2 DW349_RS02260 PF00672 HAMP domain DW349_RS02265 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DW349_RS02265 PF08447 PAS fold DW349_RS02265 PF13426 PAS domain DW349_RS02275 PF01979 Amidohydrolase family DW349_RS02280 PF00881 Nitroreductase family DW349_RS02285 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component DW349_RS02300 PF04444 Catechol dioxygenase N terminus DW349_RS02300 PF00775 Dioxygenase DW349_RS02305 PF02515 CoA-transferase family III DW349_RS02315 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DW349_RS02315 PF03466 LysR substrate binding domain DW349_RS02320 PF00563 EAL domain DW349_RS02320 PF00990 Diguanylate cyclase, GGDEF domain DW349_RS02320 PF03707 Bacterial signalling protein N terminal repeat DW349_RS02325 PF00990 Diguanylate cyclase, GGDEF domain DW349_RS02325 PF00072 Response regulator receiver domain DW349_RS02330 PF00512 His Kinase A (phospho-acceptor) domain DW349_RS02330 PF00072 Response regulator receiver domain DW349_RS02330 PF00672 HAMP domain DW349_RS02330 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DW349_RS02330 PF01627 Hpt domain DW349_RS02330 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) DW349_RS02340 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase DW349_RS02350 PF03358 NADPH-dependent FMN reductase DW349_RS02370 PF01266 FAD dependent oxidoreductase DW349_RS02375 PF00171 Aldehyde dehydrogenase family DW349_RS02380 PF00202 Aminotransferase class-III DW349_RS02385 PF00171 Aldehyde dehydrogenase family DW349_RS02390 PF01266 FAD dependent oxidoreductase DW349_RS02395 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily DW349_RS02400 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 DW349_RS02405 PF00478 IMP dehydrogenase / GMP reductase domain DW349_RS02405 PF00571 CBS domain DW349_RS02410 PF07690 Major Facilitator Superfamily DW349_RS02430 PF04371 Porphyromonas-type peptidyl-arginine deiminase DW349_RS02440 PF00120 Glutamine synthetase, catalytic domain DW349_RS02445 PF00171 Aldehyde dehydrogenase family DW349_RS02450 PF00120 Glutamine synthetase, catalytic domain DW349_RS02455 PF00202 Aminotransferase class-III DW349_RS02460 PF13416 Bacterial extracellular solute-binding protein DW349_RS02465 PF00005 ABC transporter DW349_RS02465 PF08402 TOBE domain DW349_RS02470 PF00528 Binding-protein-dependent transport system inner membrane component DW349_RS02475 PF00528 Binding-protein-dependent transport system inner membrane component DW349_RS02480 PF12729 Four helix bundle sensory module for signal transduction DW349_RS02480 PF00672 HAMP domain DW349_RS02480 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DW349_RS02485 PF03099 Biotin/lipoate A/B protein ligase family DW349_RS02485 PF08279 HTH domain DW349_RS02485 PF02237 Biotin protein ligase C terminal domain DW349_RS02490 PF03309 Type III pantothenate kinase DW349_RS02515 PF03144 Elongation factor Tu domain 2 DW349_RS02515 PF00009 Elongation factor Tu GTP binding domain DW349_RS02515 PF03143 Elongation factor Tu C-terminal domain DW349_RS02525 PF00584 SecE/Sec61-gamma subunits of protein translocation complex DW349_RS02530 PF02357 Transcription termination factor nusG DW349_RS02530 PF00467 KOW motif DW349_RS02535 PF00298 Ribosomal protein L11, RNA binding domain DW349_RS02535 PF03946 Ribosomal protein L11, N-terminal domain DW349_RS02540 PF00687 Ribosomal protein L1p/L10e family DW349_RS02545 PF00466 Ribosomal protein L10 DW349_RS02550 PF16320 Ribosomal protein L7/L12 dimerisation domain DW349_RS02550 PF00542 Ribosomal protein L7/L12 C-terminal domain DW349_RS02555 PF04565 RNA polymerase Rpb2, domain 3 DW349_RS02555 PF10385 RNA polymerase beta subunit external 1 domain DW349_RS02555 PF00562 RNA polymerase Rpb2, domain 6 DW349_RS02555 PF04561 RNA polymerase Rpb2, domain 2 DW349_RS02555 PF04560 RNA polymerase Rpb2, domain 7 DW349_RS02555 PF04563 RNA polymerase beta subunit DW349_RS02560 PF04983 RNA polymerase Rpb1, domain 3 DW349_RS02560 PF04998 RNA polymerase Rpb1, domain 5 DW349_RS02560 PF05000 RNA polymerase Rpb1, domain 4 DW349_RS02560 PF04997 RNA polymerase Rpb1, domain 1 DW349_RS02560 PF00623 RNA polymerase Rpb1, domain 2 DW349_RS02565 PF00164 Ribosomal protein S12/S23 DW349_RS02570 PF00177 Ribosomal protein S7p/S5e DW349_RS02575 PF14492 Elongation Factor G, domain II DW349_RS02575 PF03764 Elongation factor G, domain IV DW349_RS02575 PF00009 Elongation factor Tu GTP binding domain DW349_RS02575 PF03144 Elongation factor Tu domain 2 DW349_RS02575 PF00679 Elongation factor G C-terminus DW349_RS02580 PF00009 Elongation factor Tu GTP binding domain DW349_RS02580 PF03144 Elongation factor Tu domain 2 DW349_RS02580 PF03143 Elongation factor Tu C-terminal domain DW349_RS02590 PF00338 Ribosomal protein S10p/S20e DW349_RS02595 PF00297 Ribosomal protein L3 DW349_RS02600 PF00573 Ribosomal protein L4/L1 family DW349_RS02605 PF00276 Ribosomal protein L23 DW349_RS02610 PF00181 Ribosomal Proteins L2, RNA binding domain DW349_RS02610 PF03947 Ribosomal Proteins L2, C-terminal domain DW349_RS02615 PF00203 Ribosomal protein S19 DW349_RS02620 PF00237 Ribosomal protein L22p/L17e DW349_RS02625 PF00189 Ribosomal protein S3, C-terminal domain DW349_RS02625 PF07650 KH domain DW349_RS02630 PF00252 Ribosomal protein L16p/L10e DW349_RS02635 PF00831 Ribosomal L29 protein DW349_RS02640 PF00366 Ribosomal protein S17 DW349_RS02645 PF00238 Ribosomal protein L14p/L23e DW349_RS02650 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 DW349_RS02650 PF00467 KOW motif DW349_RS02655 PF00673 ribosomal L5P family C-terminus DW349_RS02655 PF00281 Ribosomal protein L5 DW349_RS02660 PF00253 Ribosomal protein S14p/S29e DW349_RS02665 PF00410 Ribosomal protein S8 DW349_RS02670 PF00347 Ribosomal protein L6 DW349_RS02675 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast DW349_RS02680 PF03719 Ribosomal protein S5, C-terminal domain DW349_RS02680 PF00333 Ribosomal protein S5, N-terminal domain DW349_RS02685 PF00327 Ribosomal protein L30p/L7e DW349_RS02690 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A DW349_RS02695 PF00344 SecY translocase DW349_RS02700 PF00444 Ribosomal protein L36 DW349_RS02705 PF00416 Ribosomal protein S13/S18 DW349_RS02710 PF00411 Ribosomal protein S11 DW349_RS02715 PF01479 S4 domain DW349_RS02715 PF00163 Ribosomal protein S4/S9 N-terminal domain DW349_RS02720 PF01000 RNA polymerase Rpb3/RpoA insert domain DW349_RS02720 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain DW349_RS02720 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain DW349_RS02725 PF01196 Ribosomal protein L17 DW349_RS02730 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) DW349_RS02730 PF00128 Alpha amylase, catalytic domain DW349_RS02735 PF02806 Alpha amylase, C-terminal all-beta domain DW349_RS02735 PF00128 Alpha amylase, catalytic domain DW349_RS02735 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) DW349_RS02740 PF01435 Peptidase family M48 DW349_RS02745 PF00158 Sigma-54 interaction domain DW349_RS02745 PF00072 Response regulator receiver domain DW349_RS02755 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DW349_RS02755 PF00512 His Kinase A (phospho-acceptor) domain DW349_RS02765 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DW349_RS02765 PF00672 HAMP domain DW349_RS02770 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain DW349_RS02770 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase DW349_RS02790 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase DW349_RS02805 PF00528 Binding-protein-dependent transport system inner membrane component DW349_RS02810 PF00528 Binding-protein-dependent transport system inner membrane component DW349_RS02815 PF08125 Mannitol dehydrogenase C-terminal domain DW349_RS02815 PF01232 Mannitol dehydrogenase Rossmann domain DW349_RS02820 PF00672 HAMP domain DW349_RS02820 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DW349_RS02835 PF00990 Diguanylate cyclase, GGDEF domain DW349_RS02835 PF00563 EAL domain DW349_RS02835 PF03707 Bacterial signalling protein N terminal repeat DW349_RS02855 PF17200 Single Cache domain 2 DW349_RS02855 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DW349_RS02855 PF00672 HAMP domain DW349_RS02865 PF00892 EamA-like transporter family DW349_RS02870 PF01545 Cation efflux family DW349_RS02875 PF00912 Transglycosylase DW349_RS02880 PF01384 Phosphate transporter family DW349_RS02885 PF01865 Protein of unknown function DUF47 DW349_RS02890 PF03061 Thioesterase superfamily DW349_RS02900 PF00528 Binding-protein-dependent transport system inner membrane component DW349_RS02905 PF00528 Binding-protein-dependent transport system inner membrane component DW349_RS02910 PF00005 ABC transporter DW349_RS02915 PF01895 PhoU domain DW349_RS02940 PF00072 Response regulator receiver domain DW349_RS02945 PF11808 Phosphate regulon sensor protein PhoR DW349_RS02945 PF00989 PAS fold DW349_RS02945 PF00512 His Kinase A (phospho-acceptor) domain DW349_RS02945 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DW349_RS02950 PF00072 Response regulator receiver domain DW349_RS02950 PF00486 Transcriptional regulatory protein, C terminal DW349_RS02955 PF01040 UbiA prenyltransferase family DW349_RS02960 PF00301 Rubredoxin DW349_RS02965 PF18113 Rubredoxin binding C-terminal domain DW349_RS02965 PF07992 Pyridine nucleotide-disulphide oxidoreductase DW349_RS02970 PF00216 Bacterial DNA-binding protein DW349_RS02975 PF01037 Lrp/AsnC ligand binding domain DW349_RS02980 PF00682 HMGL-like DW349_RS02980 PF08502 LeuA allosteric (dimerisation) domain DW349_RS02990 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain DW349_RS02990 PF17944 Arginine decarboxylase C-terminal helical extension DW349_RS02990 PF17810 Arginine decarboxylase helical bundle domain DW349_RS02995 PF01042 Endoribonuclease L-PSP DW349_RS03000 PF03279 Bacterial lipid A biosynthesis acyltransferase DW349_RS03005 PF07992 Pyridine nucleotide-disulphide oxidoreductase DW349_RS03015 PF02654 Cobalamin-5-phosphate synthase DW349_RS03020 PF02277 Phosphoribosyltransferase DW349_RS03025 PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase DW349_RS03065 PF04055 Radical SAM superfamily DW349_RS03085 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) DW349_RS03165 PF01751 Toprim domain DW349_RS03165 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DW349_RS03165 PF00986 DNA gyrase B subunit, carboxyl terminus DW349_RS03165 PF00204 DNA gyrase B DW349_RS03170 PF00149 Calcineurin-like phosphoesterase DW349_RS03175 PF06853 Protein of unknown function (DUF1249) DW349_RS03180 PF00293 NUDIX domain DW349_RS03185 PF02321 Outer membrane efflux protein DW349_RS03200 PF00672 HAMP domain DW349_RS03200 PF00909 Ammonium Transporter Family DW349_RS03215 PF07690 Major Facilitator Superfamily DW349_RS03220 PF16859 Tetracyclin repressor-like, C-terminal domain DW349_RS03220 PF00440 Bacterial regulatory proteins, tetR family DW349_RS03225 PF00480 ROK family DW349_RS03225 PF01047 MarR family DW349_RS03230 PF01547 Bacterial extracellular solute-binding protein DW349_RS03235 PF00528 Binding-protein-dependent transport system inner membrane component DW349_RS03240 PF00528 Binding-protein-dependent transport system inner membrane component DW349_RS03245 PF17851 Beta xylosidase C-terminal Concanavalin A-like domain DW349_RS03245 PF04616 Glycosyl hydrolases family 43 DW349_RS03250 PF13407 Periplasmic binding protein domain DW349_RS03255 PF02653 Branched-chain amino acid transport system / permease component DW349_RS03260 PF00005 ABC transporter DW349_RS03265 PF02541 Ppx/GppA phosphatase family DW349_RS03270 PF08450 SMP-30/Gluconolactonase/LRE-like region DW349_RS03275 PF03459 TOBE domain DW349_RS03275 PF00005 ABC transporter DW349_RS03280 PF00528 Binding-protein-dependent transport system inner membrane component DW349_RS03290 PF01070 FMN-dependent dehydrogenase DW349_RS03305 PF02230 Phospholipase/Carboxylesterase DW349_RS03310 PF01061 ABC-2 type transporter DW349_RS03315 PF13732 Domain of unknown function (DUF4162) DW349_RS03315 PF00005 ABC transporter DW349_RS03320 PF00990 Diguanylate cyclase, GGDEF domain DW349_RS03320 PF08448 PAS fold DW349_RS03325 PF00672 HAMP domain DW349_RS03325 PF02743 Cache domain DW349_RS03325 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DW349_RS03330 PF09084 NMT1/THI5 like DW349_RS03335 PF00005 ABC transporter DW349_RS03340 PF00528 Binding-protein-dependent transport system inner membrane component DW349_RS03355 PF02386 Cation transport protein DW349_RS03360 PF02702 Osmosensitive K+ channel His kinase sensor domain DW349_RS03360 PF00512 His Kinase A (phospho-acceptor) domain DW349_RS03360 PF13493 Domain of unknown function (DUF4118) DW349_RS03360 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DW349_RS03365 PF00072 Response regulator receiver domain DW349_RS03365 PF00486 Transcriptional regulatory protein, C terminal DW349_RS03370 PF03193 RsgA GTPase DW349_RS03375 PF00313 'Cold-shock' DNA-binding domain DW349_RS03385 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) DW349_RS03390 PF04055 Radical SAM superfamily DW349_RS03390 PF06969 HemN C-terminal domain DW349_RS03395 PF01725 Ham1 family DW349_RS03405 PF00561 alpha/beta hydrolase fold DW349_RS03405 PF07021 Methionine biosynthesis protein MetW DW349_RS03410 PF00561 alpha/beta hydrolase fold DW349_RS03415 PF02325 YGGT family DW349_RS03420 PF14748 Pyrroline-5-carboxylate reductase dimerisation DW349_RS03420 PF03807 NADP oxidoreductase coenzyme F420-dependent DW349_RS03425 PF01168 Alanine racemase, N-terminal domain DW349_RS03430 PF00437 Type II/IV secretion system protein DW349_RS03435 PF11849 Domain of unknown function (DUF3369) DW349_RS03445 PF01266 FAD dependent oxidoreductase DW349_RS03445 PF16901 C-terminal domain of alpha-glycerophosphate oxidase DW349_RS03450 PF07729 FCD domain DW349_RS03450 PF00392 Bacterial regulatory proteins, gntR family DW349_RS03455 PF00355 Rieske [2Fe-2S] domain DW349_RS03460 PF00111 2Fe-2S iron-sulfur cluster binding domain DW349_RS03465 PF03480 Bacterial extracellular solute-binding protein, family 7 DW349_RS03475 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component DW349_RS03495 PF00011 Hsp20/alpha crystallin family DW349_RS03515 PF00005 ABC transporter DW349_RS03520 PF02653 Branched-chain amino acid transport system / permease component DW349_RS03530 PF00248 Aldo/keto reductase family DW349_RS03535 PF16901 C-terminal domain of alpha-glycerophosphate oxidase DW349_RS03535 PF01266 FAD dependent oxidoreductase DW349_RS03545 PF00370 FGGY family of carbohydrate kinases, N-terminal domain DW349_RS03545 PF02782 FGGY family of carbohydrate kinases, C-terminal domain DW349_RS03550 PF00465 Iron-containing alcohol dehydrogenase DW349_RS03555 PF00171 Aldehyde dehydrogenase family DW349_RS03560 PF01361 Tautomerase enzyme DW349_RS03565 PF09339 IclR helix-turn-helix domain DW349_RS03565 PF01614 Bacterial transcriptional regulator DW349_RS03585 PF00005 ABC transporter DW349_RS03590 PF01032 FecCD transport family DW349_RS03595 PF01497 Periplasmic binding protein DW349_RS03600 PF05171 Haemin-degrading HemS.ChuX domain DW349_RS03605 PF00593 TonB dependent receptor DW349_RS03605 PF07715 TonB-dependent Receptor Plug Domain DW349_RS03615 PF00005 ABC transporter DW349_RS03620 PF01032 FecCD transport family DW349_RS03625 PF01032 FecCD transport family DW349_RS03675 PF07690 Major Facilitator Superfamily DW349_RS03680 PF01032 FecCD transport family DW349_RS03685 PF01032 FecCD transport family DW349_RS03690 PF01497 Periplasmic binding protein DW349_RS03710 PF07690 Major Facilitator Superfamily DW349_RS03720 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ DW349_RS03745 PF00072 Response regulator receiver domain DW349_RS03745 PF00196 Bacterial regulatory proteins, luxR family DW349_RS03750 PF00512 His Kinase A (phospho-acceptor) domain DW349_RS03750 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DW349_RS03750 PF00672 HAMP domain DW349_RS03755 PF03476 MOSC N-terminal beta barrel domain DW349_RS03755 PF03473 MOSC domain DW349_RS03755 PF00111 2Fe-2S iron-sulfur cluster binding domain DW349_RS03760 PF00268 Ribonucleotide reductase, small chain DW349_RS03765 PF00317 Ribonucleotide reductase, all-alpha domain DW349_RS03765 PF02867 Ribonucleotide reductase, barrel domain DW349_RS03765 PF03477 ATP cone domain DW349_RS03770 PF00535 Glycosyl transferase family 2 DW349_RS03770 PF00795 Carbon-nitrogen hydrolase DW349_RS03785 PF01169 Uncharacterized protein family UPF0016 DW349_RS03800 PF16868 NMT1-like family DW349_RS03805 PF04545 Sigma-70, region 4 DW349_RS03805 PF03979 Sigma-70 factor, region 1.1 DW349_RS03805 PF04539 Sigma-70 region 3 DW349_RS03805 PF04542 Sigma-70 region 2 DW349_RS03805 PF00140 Sigma-70 factor, region 1.2 DW349_RS03805 PF04546 Sigma-70, non-essential region DW349_RS03810 PF13662 Toprim domain DW349_RS03810 PF08278 DNA primase DnaG DnaB-binding DW349_RS03810 PF10410 DnaB-helicase binding domain of primase DW349_RS03810 PF01807 CHC2 zinc finger DW349_RS03810 PF08275 DNA primase catalytic core, N-terminal domain DW349_RS03820 PF01165 Ribosomal protein S21 DW349_RS03825 PF00814 Glycoprotease family DW349_RS03830 PF02152 Dihydroneopterin aldolase DW349_RS03835 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) DW349_RS03840 PF00132 Bacterial transferase hexapeptide (six repeats) DW349_RS03845 PF13472 GDSL-like Lipase/Acylhydrolase family DW349_RS03850 PF00005 ABC transporter DW349_RS03860 PF00578 AhpC/TSA family DW349_RS03860 PF10417 C-terminal domain of 1-Cys peroxiredoxin DW349_RS03865 PF00089 Trypsin DW349_RS03870 PF00089 Trypsin DW349_RS03875 PF03193 RsgA GTPase DW349_RS03880 PF00929 Exonuclease DW349_RS03885 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DW349_RS03885 PF03466 LysR substrate binding domain DW349_RS03890 PF00085 Thioredoxin DW349_RS03895 PF09317 Domain of unknown function (DUF1974) DW349_RS03895 PF00441 Acyl-CoA dehydrogenase, C-terminal domain DW349_RS03895 PF02771 Acyl-CoA dehydrogenase, N-terminal domain DW349_RS03905 PF01910 Thiamine-binding protein DW349_RS03910 PF00929 Exonuclease DW349_RS03925 PF12791 Anti-sigma factor N-terminus DW349_RS03925 PF07691 PA14 domain DW349_RS03935 PF00114 Pilin (bacterial filament) DW349_RS03935 PF07963 Prokaryotic N-terminal methylation motif DW349_RS03950 PF07963 Prokaryotic N-terminal methylation motif DW349_RS03955 PF00342 Phosphoglucose isomerase DW349_RS03960 PF02261 Aspartate decarboxylase DW349_RS03965 PF02569 Pantoate-beta-alanine ligase DW349_RS03970 PF02548 Ketopantoate hydroxymethyltransferase DW349_RS03975 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) DW349_RS03980 PF01743 Poly A polymerase head domain DW349_RS03980 PF12626 Polymerase A arginine-rich C-terminus DW349_RS03980 PF12627 Probable RNA and SrmB- binding site of polymerase A DW349_RS03985 PF00158 Sigma-54 interaction domain DW349_RS03985 PF02954 Bacterial regulatory protein, Fis family DW349_RS03985 PF00072 Response regulator receiver domain DW349_RS03990 PF13426 PAS domain DW349_RS03990 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DW349_RS03990 PF00512 His Kinase A (phospho-acceptor) domain DW349_RS03990 PF13188 PAS domain DW349_RS03990 PF00989 PAS fold DW349_RS03995 PF11849 Domain of unknown function (DUF3369) DW349_RS04000 PF00512 His Kinase A (phospho-acceptor) domain DW349_RS04000 PF02743 Cache domain DW349_RS04000 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DW349_RS04015 PF06969 HemN C-terminal domain DW349_RS04015 PF04055 Radical SAM superfamily DW349_RS04020 PF00749 tRNA synthetases class I (E and Q), catalytic domain DW349_RS04025 PF00155 Aminotransferase class I and II DW349_RS04035 PF00005 ABC transporter DW349_RS04040 PF01032 FecCD transport family DW349_RS04055 PF04055 Radical SAM superfamily DW349_RS04060 PF01132 Elongation factor P (EF-P) OB domain DW349_RS04060 PF08207 Elongation factor P (EF-P) KOW-like domain DW349_RS04060 PF09285 Elongation factor P, C-terminal DW349_RS04065 PF07729 FCD domain DW349_RS04065 PF00392 Bacterial regulatory proteins, gntR family DW349_RS04070 PF00528 Binding-protein-dependent transport system inner membrane component DW349_RS04075 PF00528 Binding-protein-dependent transport system inner membrane component DW349_RS04080 PF00497 Bacterial extracellular solute-binding proteins, family 3 DW349_RS04090 PF00005 ABC transporter DW349_RS04095 PF01451 Low molecular weight phosphotyrosine protein phosphatase DW349_RS04100 PF00152 tRNA synthetases class II (D, K and N) DW349_RS04110 PF02666 Phosphatidylserine decarboxylase DW349_RS04125 PF00576 HIUase/Transthyretin family DW349_RS04140 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain DW349_RS04140 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase DW349_RS04145 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase DW349_RS04145 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain DW349_RS04145 PF00111 2Fe-2S iron-sulfur cluster binding domain DW349_RS04145 PF01799 [2Fe-2S] binding domain DW349_RS04150 PF07690 Major Facilitator Superfamily DW349_RS04170 PF08668 HDOD domain DW349_RS04170 PF00563 EAL domain DW349_RS04180 PF07992 Pyridine nucleotide-disulphide oxidoreductase DW349_RS04185 PF02492 CobW/HypB/UreG, nucleotide-binding domain DW349_RS04185 PF07683 Cobalamin synthesis protein cobW C-terminal domain DW349_RS04190 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain DW349_RS04190 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain DW349_RS04195 PF00528 Binding-protein-dependent transport system inner membrane component DW349_RS04205 PF00005 ABC transporter DW349_RS04205 PF12857 TOBE-like domain DW349_RS04210 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DW349_RS04210 PF03466 LysR substrate binding domain DW349_RS04215 PF01066 CDP-alcohol phosphatidyltransferase DW349_RS04220 PF00174 Oxidoreductase molybdopterin binding domain DW349_RS04225 PF01794 Ferric reductase like transmembrane component DW349_RS04245 PF02390 Putative methyltransferase DW349_RS04250 PF04241 Protein of unknown function (DUF423) DW349_RS04255 PF04545 Sigma-70, region 4 DW349_RS04255 PF00140 Sigma-70 factor, region 1.2 DW349_RS04255 PF04542 Sigma-70 region 2 DW349_RS04260 PF18075 FtsX extracellular domain DW349_RS04265 PF00005 ABC transporter DW349_RS04270 PF02881 SRP54-type protein, helical bundle domain DW349_RS04270 PF00448 SRP54-type protein, GTPase domain DW349_RS04285 PF00171 Aldehyde dehydrogenase family DW349_RS04290 PF01467 Cytidylyltransferase-like DW349_RS04300 PF00478 IMP dehydrogenase / GMP reductase domain DW349_RS04310 PF12729 Four helix bundle sensory module for signal transduction DW349_RS04310 PF00672 HAMP domain DW349_RS04310 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DW349_RS04320 PF02951 Prokaryotic glutathione synthetase, N-terminal domain DW349_RS04320 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain DW349_RS04325 PF01066 CDP-alcohol phosphatidyltransferase DW349_RS04330 PF00005 ABC transporter DW349_RS04335 PF00528 Binding-protein-dependent transport system inner membrane component DW349_RS04340 PF13416 Bacterial extracellular solute-binding protein DW349_RS04345 PF03710 Glutamate-ammonia ligase adenylyltransferase DW349_RS04345 PF08335 GlnD PII-uridylyltransferase DW349_RS04350 PF01063 Amino-transferase class IV DW349_RS04355 PF01985 CRS1 / YhbY (CRM) domain DW349_RS04360 PF01728 FtsJ-like methyltransferase DW349_RS04365 PF01434 Peptidase family M41 DW349_RS04365 PF00004 ATPase family associated with various cellular activities (AAA) DW349_RS04365 PF17862 AAA+ lid domain DW349_RS04365 PF06480 FtsH Extracellular DW349_RS04370 PF00809 Pterin binding enzyme DW349_RS04375 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I DW349_RS04375 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain DW349_RS04375 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III DW349_RS04375 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II DW349_RS04380 PF00121 Triosephosphate isomerase DW349_RS04385 PF03840 Preprotein translocase SecG subunit DW349_RS04400 PF02576 RimP N-terminal domain DW349_RS04400 PF17384 RimP C-terminal SH3 domain DW349_RS04405 PF13184 NusA-like KH domain DW349_RS04405 PF08529 NusA N-terminal domain DW349_RS04410 PF04760 Translation initiation factor IF-2, N-terminal region DW349_RS04410 PF00009 Elongation factor Tu GTP binding domain DW349_RS04410 PF08364 Bacterial translation initiation factor IF-2 associated region DW349_RS04410 PF11987 Translation-initiation factor 2 DW349_RS04415 PF02033 Ribosome-binding factor A DW349_RS04420 PF16198 tRNA pseudouridylate synthase B C-terminal domain DW349_RS04420 PF09157 Pseudouridine synthase II TruB, C-terminal DW349_RS04420 PF01509 TruB family pseudouridylate synthase (N terminal domain) DW349_RS04425 PF00312 Ribosomal protein S15 DW349_RS04430 PF03725 3' exoribonuclease family, domain 2 DW349_RS04430 PF00575 S1 RNA binding domain DW349_RS04430 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain DW349_RS04430 PF00013 KH domain DW349_RS04430 PF01138 3' exoribonuclease family, domain 1 DW349_RS04450 PF00005 ABC transporter DW349_RS04460 PF01734 Patatin-like phospholipase DW349_RS04465 PF01758 Sodium Bile acid symporter family DW349_RS04480 PF00482 Type II secretion system (T2SS), protein F DW349_RS04485 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain DW349_RS04485 PF00437 Type II/IV secretion system protein DW349_RS04500 PF01471 Putative peptidoglycan binding domain DW349_RS04500 PF13401 AAA domain DW349_RS04505 PF00263 Bacterial type II and III secretion system protein DW349_RS04505 PF03958 Bacterial type II/III secretion system short domain DW349_RS04530 PF00588 SpoU rRNA Methylase family DW349_RS04535 PF01494 FAD binding domain DW349_RS04540 PF01494 FAD binding domain DW349_RS04550 PF00528 Binding-protein-dependent transport system inner membrane component DW349_RS04555 PF00528 Binding-protein-dependent transport system inner membrane component DW349_RS04560 PF01547 Bacterial extracellular solute-binding protein DW349_RS04565 PF01547 Bacterial extracellular solute-binding protein DW349_RS04570 PF00072 Response regulator receiver domain DW349_RS04570 PF00486 Transcriptional regulatory protein, C terminal DW349_RS04575 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DW349_RS04575 PF00672 HAMP domain DW349_RS04575 PF00512 His Kinase A (phospho-acceptor) domain DW349_RS04580 PF14437 MafB19-like deaminase DW349_RS04600 PF13292 1-deoxy-D-xylulose-5-phosphate synthase DW349_RS04600 PF02779 Transketolase, pyrimidine binding domain DW349_RS04600 PF02780 Transketolase, C-terminal domain DW349_RS04605 PF00348 Polyprenyl synthetase DW349_RS04610 PF02609 Exonuclease VII small subunit DW349_RS04615 PF01618 MotA/TolQ/ExbB proton channel family DW349_RS04620 PF00691 OmpA family DW349_RS04620 PF13677 Membrane MotB of proton-channel complex MotA/MotB DW349_RS04630 PF04972 BON domain DW349_RS04635 PF13580 SIS domain DW349_RS04640 PF02021 Uncharacterised protein family UPF0102 DW349_RS04645 PF04348 LppC putative lipoprotein DW349_RS04650 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases DW349_RS04660 PF02381 MraZ protein, putative antitoxin-like DW349_RS04665 PF01795 MraW methylase family DW349_RS04670 PF04999 Cell division protein FtsL DW349_RS04675 PF00905 Penicillin binding protein transpeptidase domain DW349_RS04675 PF03717 Penicillin-binding Protein dimerisation domain DW349_RS04680 PF02875 Mur ligase family, glutamate ligase domain DW349_RS04680 PF01225 Mur ligase family, catalytic domain DW349_RS04680 PF08245 Mur ligase middle domain DW349_RS04685 PF01225 Mur ligase family, catalytic domain DW349_RS04685 PF02875 Mur ligase family, glutamate ligase domain DW349_RS04685 PF08245 Mur ligase middle domain DW349_RS04690 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 DW349_RS04690 PF00953 Glycosyl transferase family 4 DW349_RS04695 PF02875 Mur ligase family, glutamate ligase domain DW349_RS04695 PF08245 Mur ligase middle domain DW349_RS04700 PF01098 Cell cycle protein DW349_RS04705 PF04101 Glycosyltransferase family 28 C-terminal domain DW349_RS04705 PF03033 Glycosyltransferase family 28 N-terminal domain DW349_RS04710 PF01225 Mur ligase family, catalytic domain DW349_RS04710 PF02875 Mur ligase family, glutamate ligase domain DW349_RS04710 PF08245 Mur ligase middle domain DW349_RS04715 PF01820 D-ala D-ala ligase N-terminus DW349_RS04715 PF07478 D-ala D-ala ligase C-terminus DW349_RS04720 PF08478 POTRA domain, FtsQ-type DW349_RS04720 PF03799 Cell division protein FtsQ DW349_RS04725 PF02491 SHS2 domain inserted in FTSA DW349_RS04730 PF12327 FtsZ family, C-terminal domain DW349_RS04730 PF00091 Tubulin/FtsZ family, GTPase domain DW349_RS04735 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase DW349_RS04740 PF01476 LysM domain DW349_RS04740 PF08525 Opacity-associated protein A N-terminal motif DW349_RS04740 PF01551 Peptidase family M23 DW349_RS04745 PF02810 SEC-C motif DW349_RS04745 PF01043 SecA preprotein cross-linking domain DW349_RS04745 PF07516 SecA Wing and Scaffold domain DW349_RS04745 PF07517 SecA DEAD-like domain DW349_RS04750 PF01960 ArgJ family DW349_RS04755 PF00293 NUDIX domain DW349_RS04760 PF03884 DNA gyrase inhibitor YacG DW349_RS04765 PF01121 Dephospho-CoA kinase DW349_RS04770 PF01478 Type IV leader peptidase family DW349_RS04770 PF06750 Bacterial Peptidase A24 N-terminal domain DW349_RS04775 PF00482 Type II secretion system (T2SS), protein F DW349_RS04780 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain DW349_RS04780 PF00437 Type II/IV secretion system protein DW349_RS04785 PF07963 Prokaryotic N-terminal methylation motif DW349_RS04785 PF00114 Pilin (bacterial filament) DW349_RS04790 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain DW349_RS04790 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain DW349_RS04800 PF07992 Pyridine nucleotide-disulphide oxidoreductase DW349_RS04805 PF03776 Septum formation topological specificity factor MinE DW349_RS04810 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain DW349_RS04815 PF05209 Septum formation inhibitor MinC, N-terminal domain DW349_RS04815 PF03775 Septum formation inhibitor MinC, C-terminal domain DW349_RS04835 PF09335 SNARE associated Golgi protein DW349_RS04840 PF00171 Aldehyde dehydrogenase family DW349_RS04845 PF01467 Cytidylyltransferase-like DW349_RS04855 PF02590 Predicted SPOUT methyltransferase DW349_RS04860 PF00905 Penicillin binding protein transpeptidase domain DW349_RS04860 PF03717 Penicillin-binding Protein dimerisation domain DW349_RS04865 PF01098 Cell cycle protein DW349_RS04870 PF13406 Transglycosylase SLT domain DW349_RS04875 PF03330 Lytic transglycolase DW349_RS04875 PF05036 Sporulation related domain DW349_RS04880 PF07943 Penicillin-binding protein 5, C-terminal domain DW349_RS04880 PF00768 D-alanyl-D-alanine carboxypeptidase DW349_RS04890 PF03099 Biotin/lipoate A/B protein ligase family DW349_RS04895 PF04055 Radical SAM superfamily DW349_RS04905 PF00817 impB/mucB/samB family DW349_RS04905 PF11798 IMS family HHH motif DW349_RS04905 PF11799 impB/mucB/samB family C-terminal domain DW349_RS04910 PF00440 Bacterial regulatory proteins, tetR family DW349_RS04920 PF01258 Prokaryotic dksA/traR C4-type zinc finger DW349_RS04925 PF00551 Formyl transferase DW349_RS04925 PF01842 ACT domain DW349_RS04935 PF01464 Transglycosylase SLT domain DW349_RS04935 PF00497 Bacterial extracellular solute-binding proteins, family 3 DW349_RS04940 PF02769 AIR synthase related protein, C-terminal domain DW349_RS04940 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain DW349_RS04940 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal DW349_RS04950 PF00561 alpha/beta hydrolase fold DW349_RS04955 PF03692 Putative zinc- or iron-chelating domain DW349_RS04965 PF01571 Aminomethyltransferase folate-binding domain DW349_RS04970 PF03937 Flavinator of succinate dehydrogenase DW349_RS04980 PF00890 FAD binding domain DW349_RS04980 PF02910 Fumarate reductase flavoprotein C-term DW349_RS04985 PF04542 Sigma-70 region 2 DW349_RS04985 PF08281 Sigma-70, region 4 DW349_RS04995 PF03888 MucB/RseB N-terminal domain DW349_RS04995 PF17188 MucB/RseB C-terminal domain DW349_RS05005 PF13180 PDZ domain DW349_RS05010 PF06421 GTP-binding protein LepA C-terminus DW349_RS05010 PF00679 Elongation factor G C-terminus DW349_RS05010 PF00009 Elongation factor Tu GTP binding domain DW349_RS05015 PF10502 Signal peptidase, peptidase S26 DW349_RS05020 PF14622 Ribonuclease-III-like DW349_RS05020 PF00035 Double-stranded RNA binding motif DW349_RS05025 PF07650 KH domain DW349_RS05025 PF01926 50S ribosome-binding GTPase DW349_RS05030 PF11967 Recombination protein O N terminal DW349_RS05030 PF02565 Recombination protein O C terminal DW349_RS05035 PF01648 4'-phosphopantetheinyl transferase superfamily DW349_RS05040 PF00072 Response regulator receiver domain DW349_RS05040 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) DW349_RS05040 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DW349_RS05040 PF01627 Hpt domain DW349_RS05040 PF00512 His Kinase A (phospho-acceptor) domain DW349_RS05040 PF00672 HAMP domain DW349_RS05045 PF00291 Pyridoxal-phosphate dependent enzyme DW349_RS05050 PF02824 TGS domain DW349_RS05050 PF04607 Region found in RelA / SpoT proteins DW349_RS05050 PF13291 ACT domain DW349_RS05055 PF03819 MazG nucleotide pyrophosphohydrolase domain DW349_RS05060 PF17760 UvrA interaction domain DW349_RS05060 PF17755 UvrA DNA-binding domain DW349_RS05065 PF07690 Major Facilitator Superfamily DW349_RS05070 PF00436 Single-strand binding protein family DW349_RS05090 PF00348 Polyprenyl synthetase DW349_RS05095 PF00829 Ribosomal prokaryotic L21 protein DW349_RS05100 PF01016 Ribosomal L27 protein DW349_RS05105 PF01926 50S ribosome-binding GTPase DW349_RS05105 PF01018 GTP1/OBG DW349_RS05110 PF01472 PUA domain DW349_RS05110 PF00696 Amino acid kinase family DW349_RS05115 PF03352 Methyladenine glycosylase DW349_RS05130 PF10415 Fumarase C C-terminus DW349_RS05130 PF00206 Lyase DW349_RS05135 PF03471 Transporter associated domain DW349_RS05135 PF00571 CBS domain DW349_RS05140 PF02130 Uncharacterized protein family UPF0054 DW349_RS05145 PF02562 PhoH-like protein DW349_RS05150 PF01938 TRAM domain DW349_RS05150 PF04055 Radical SAM superfamily DW349_RS05150 PF00919 Uncharacterized protein family UPF0004 DW349_RS05160 PF07690 Major Facilitator Superfamily DW349_RS05170 PF00677 Lumazine binding domain DW349_RS05175 PF13673 Acetyltransferase (GNAT) domain DW349_RS05180 PF02913 FAD linked oxidases, C-terminal domain DW349_RS05180 PF01565 FAD binding domain DW349_RS05185 PF12973 ChrR Cupin-like domain DW349_RS05190 PF04545 Sigma-70, region 4 DW349_RS05190 PF04542 Sigma-70 region 2 DW349_RS05195 PF04751 Protein of unknown function (DUF615) DW349_RS05200 PF03448 MgtE intracellular N domain DW349_RS05200 PF00571 CBS domain DW349_RS05200 PF01769 Divalent cation transporter DW349_RS05205 PF00381 PTS HPr component phosphorylation site DW349_RS05210 PF03668 P-loop ATPase protein family DW349_RS05215 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 DW349_RS05220 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein DW349_RS05225 PF00309 Sigma-54 factor, Activator interacting domain (AID) DW349_RS05225 PF04552 Sigma-54, DNA binding domain DW349_RS05225 PF04963 Sigma-54 factor, core binding domain DW349_RS05230 PF00005 ABC transporter DW349_RS05230 PF12399 Branched-chain amino acid ATP-binding cassette transporter DW349_RS05245 PF01380 SIS domain DW349_RS05245 PF00571 CBS domain DW349_RS05260 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) DW349_RS05265 PF01634 ATP phosphoribosyltransferase DW349_RS05270 PF00815 Histidinol dehydrogenase DW349_RS05275 PF00155 Aminotransferase class I and II DW349_RS05280 PF13180 PDZ domain DW349_RS05285 PF01784 NIF3 (NGG1p interacting factor 3) DW349_RS05290 PF00009 Elongation factor Tu GTP binding domain DW349_RS05295 PF01507 Phosphoadenosine phosphosulfate reductase family DW349_RS05305 PF03969 AFG1-like ATPase DW349_RS05310 PF00534 Glycosyl transferases group 1 DW349_RS05315 PF00535 Glycosyl transferase family 2 DW349_RS05345 PF02837 Glycosyl hydrolases family 2, sugar binding domain DW349_RS05345 PF02836 Glycosyl hydrolases family 2, TIM barrel domain DW349_RS05345 PF00703 Glycosyl hydrolases family 2 DW349_RS05345 PF02929 Beta galactosidase small chain DW349_RS05345 PF16353 Domain of unknown function(DUF4981) DW349_RS05355 PF16874 Glycosyl hydrolase family 36 C-terminal domain DW349_RS05355 PF16875 Glycosyl hydrolase family 36 N-terminal domain DW349_RS05360 PF00528 Binding-protein-dependent transport system inner membrane component DW349_RS05365 PF00528 Binding-protein-dependent transport system inner membrane component DW349_RS05375 PF02782 FGGY family of carbohydrate kinases, C-terminal domain DW349_RS05375 PF00370 FGGY family of carbohydrate kinases, N-terminal domain DW349_RS05380 PF00672 HAMP domain DW349_RS05380 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DW349_RS05385 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region DW349_RS05390 PF00005 ABC transporter DW349_RS05395 PF01061 ABC-2 type transporter DW349_RS05400 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term DW349_RS05400 PF14489 QueF-like protein DW349_RS05415 PF12857 TOBE-like domain DW349_RS05415 PF00005 ABC transporter DW349_RS05420 PF03649 Uncharacterised protein family (UPF0014) DW349_RS05430 PF01638 HxlR-like helix-turn-helix DW349_RS05445 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DW349_RS05445 PF03466 LysR substrate binding domain DW349_RS05450 PF00248 Aldo/keto reductase family DW349_RS05455 PF07992 Pyridine nucleotide-disulphide oxidoreductase DW349_RS05455 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain DW349_RS05465 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain DW349_RS05465 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain DW349_RS05470 PF01425 Amidase DW349_RS05475 PF00226 DnaJ domain DW349_RS05475 PF01556 DnaJ C terminal domain DW349_RS05480 PF00990 Diguanylate cyclase, GGDEF domain DW349_RS05500 PF07729 FCD domain DW349_RS05500 PF00392 Bacterial regulatory proteins, gntR family DW349_RS05510 PF00285 Citrate synthase, C-terminal domain DW349_RS05515 PF03972 MmgE/PrpD family DW349_RS05535 PF02687 FtsX-like permease family DW349_RS05535 PF12704 MacB-like periplasmic core domain DW349_RS05540 PF00005 ABC transporter DW349_RS05545 PF01925 Sulfite exporter TauE/SafE DW349_RS05550 PF00005 ABC transporter DW349_RS05560 PF02632 BioY family DW349_RS05565 PF02347 Glycine cleavage system P-protein DW349_RS05570 PF01597 Glycine cleavage H-protein DW349_RS05580 PF02777 Iron/manganese superoxide dismutases, C-terminal domain DW349_RS05580 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain DW349_RS05590 PF00455 DeoR C terminal sensor domain DW349_RS05590 PF08220 DeoR-like helix-turn-helix domain DW349_RS05595 PF14789 Tetrahydrodipicolinate N-succinyltransferase middle DW349_RS05595 PF14602 Hexapeptide repeat of succinyl-transferase DW349_RS05600 PF03960 ArsC family DW349_RS05605 PF00155 Aminotransferase class I and II DW349_RS05610 PF01966 HD domain DW349_RS05610 PF01909 Nucleotidyltransferase domain DW349_RS05610 PF01842 ACT domain DW349_RS05610 PF08335 GlnD PII-uridylyltransferase DW349_RS05615 PF00557 Metallopeptidase family M24 DW349_RS05620 PF00318 Ribosomal protein S2 DW349_RS05625 PF00889 Elongation factor TS DW349_RS05630 PF00696 Amino acid kinase family DW349_RS05635 PF01765 Ribosome recycling factor DW349_RS05640 PF01255 Putative undecaprenyl diphosphate synthase DW349_RS05650 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain DW349_RS05650 PF13288 DXP reductoisomerase C-terminal domain DW349_RS05650 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase DW349_RS05655 PF13180 PDZ domain DW349_RS05655 PF17820 PDZ domain DW349_RS05655 PF02163 Peptidase family M50 DW349_RS05660 PF01103 Surface antigen DW349_RS05660 PF07244 Surface antigen variable number repeat DW349_RS05670 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD DW349_RS05670 PF00132 Bacterial transferase hexapeptide (six repeats) DW349_RS05675 PF07977 FabA-like domain DW349_RS05680 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 DW349_RS05680 PF00132 Bacterial transferase hexapeptide (six repeats) DW349_RS05685 PF02684 Lipid-A-disaccharide synthetase DW349_RS05690 PF01351 Ribonuclease HII DW349_RS05695 PF14579 Helix-hairpin-helix motif DW349_RS05695 PF02811 PHP domain DW349_RS05695 PF01336 OB-fold nucleic acid binding domain DW349_RS05695 PF07733 Bacterial DNA polymerase III alpha NTPase domain DW349_RS05695 PF17657 Bacterial DNA polymerase III alpha subunit finger domain DW349_RS05700 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit DW349_RS05710 PF01171 PP-loop family DW349_RS05710 PF09179 TilS substrate binding domain DW349_RS05710 PF11734 TilS substrate C-terminal domain DW349_RS05715 PF06418 CTP synthase N-terminus DW349_RS05715 PF00117 Glutamine amidotransferase class-I DW349_RS05720 PF00113 Enolase, C-terminal TIM barrel domain DW349_RS05720 PF03952 Enolase, N-terminal domain DW349_RS05725 PF04977 Septum formation initiator DW349_RS05730 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase DW349_RS05735 PF02542 YgbB family DW349_RS05740 PF01142 tRNA pseudouridine synthase D (TruD) DW349_RS05755 PF01476 LysM domain DW349_RS05755 PF01551 Peptidase family M23 DW349_RS05760 PF04542 Sigma-70 region 2 DW349_RS05760 PF04545 Sigma-70, region 4 DW349_RS05760 PF00140 Sigma-70 factor, region 1.2 DW349_RS05760 PF04539 Sigma-70 region 3 DW349_RS05765 PF00037 4Fe-4S binding domain DW349_RS05765 PF11953 Domain of unknown function (DUF3470) DW349_RS05770 PF00488 MutS domain V DW349_RS05770 PF05190 MutS family domain IV DW349_RS05770 PF05188 MutS domain II DW349_RS05770 PF05192 MutS domain III DW349_RS05770 PF01624 MutS domain I DW349_RS05775 PF02464 Competence-damaged protein DW349_RS05775 PF18146 Damage-inducible protein CinA KH domain DW349_RS05775 PF00994 Probable molybdopterin binding domain DW349_RS05780 PF00154 recA bacterial DNA recombination protein DW349_RS05785 PF02631 RecX family DW349_RS05790 PF01411 tRNA synthetases class II (A) DW349_RS05790 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain DW349_RS05790 PF02272 DHHA1 domain DW349_RS05795 PF13840 ACT domain DW349_RS05795 PF01842 ACT domain DW349_RS05795 PF00696 Amino acid kinase family DW349_RS05800 PF02599 Global regulator protein family DW349_RS05820 PF01207 Dihydrouridine synthase (Dus) DW349_RS05830 PF00682 HMGL-like DW349_RS05830 PF02436 Conserved carboxylase domain DW349_RS05830 PF00364 Biotin-requiring enzyme DW349_RS05835 PF03977 Na+-transporting oxaloacetate decarboxylase beta subunit DW349_RS05870 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component DW349_RS05870 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component DW349_RS05900 PF00724 NADH:flavin oxidoreductase / NADH oxidase family DW349_RS05900 PF07992 Pyridine nucleotide-disulphide oxidoreductase DW349_RS05905 PF01926 50S ribosome-binding GTPase DW349_RS05910 PF03466 LysR substrate binding domain DW349_RS05910 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DW349_RS05915 PF00106 short chain dehydrogenase DW349_RS05920 PF00850 Histone deacetylase domain DW349_RS05925 PF00583 Acetyltransferase (GNAT) family DW349_RS05925 PF13380 CoA binding domain DW349_RS05925 PF13607 Succinyl-CoA ligase like flavodoxin domain DW349_RS05930 PF00293 NUDIX domain DW349_RS05930 PF09296 NADH pyrophosphatase-like rudimentary NUDIX domain DW349_RS05930 PF09297 NADH pyrophosphatase zinc ribbon domain DW349_RS05935 PF00325 Bacterial regulatory proteins, crp family DW349_RS05935 PF00027 Cyclic nucleotide-binding domain DW349_RS05940 PF01171 PP-loop family DW349_RS05965 PF00403 Heavy-metal-associated domain DW349_RS05975 PF13746 4Fe-4S dicluster domain DW349_RS05975 PF11614 IG-like fold at C-terminal of FixG, putative oxidoreductase DW349_RS05975 PF12801 4Fe-4S binding domain DW349_RS05980 PF14715 N-terminal domain of cytochrome oxidase-cbb3, FixP DW349_RS05980 PF13442 Cytochrome C oxidase, cbb3-type, subunit III DW349_RS05995 PF00115 Cytochrome C and Quinol oxidase polypeptide I DW349_RS06000 PF00708 Acylphosphatase DW349_RS06005 PF02938 GAD domain DW349_RS06005 PF01336 OB-fold nucleic acid binding domain DW349_RS06005 PF00152 tRNA synthetases class II (D, K and N) DW349_RS06010 PF01709 Transcriptional regulator DW349_RS06015 PF02075 Crossover junction endodeoxyribonuclease RuvC DW349_RS06020 PF07499 RuvA, C-terminal domain DW349_RS06020 PF01330 RuvA N terminal domain DW349_RS06025 PF17864 RuvB AAA lid domain DW349_RS06025 PF05491 RuvB C-terminal winged helix domain DW349_RS06025 PF05496 Holliday junction DNA helicase RuvB P-loop domain DW349_RS06030 PF01618 MotA/TolQ/ExbB proton channel family DW349_RS06035 PF02472 Biopolymer transport protein ExbD/TolR DW349_RS06045 PF04052 TolB amino-terminal domain DW349_RS06045 PF07676 WD40-like Beta Propeller Repeat DW349_RS06050 PF00691 OmpA family DW349_RS06055 PF13525 Outer membrane lipoprotein DW349_RS06055 PF16331 TolA binding protein trimerisation DW349_RS06060 PF06508 Queuosine biosynthesis protein QueC DW349_RS06075 PF02445 Quinolinate synthetase A protein DW349_RS06090 PF01594 AI-2E family transporter DW349_RS06095 PF00578 AhpC/TSA family DW349_RS06100 PF00701 Dihydrodipicolinate synthetase family DW349_RS06110 PF12706 Beta-lactamase superfamily domain DW349_RS06115 PF01259 SAICAR synthetase DW349_RS06125 PF08359 YsiA-like protein, C-terminal region DW349_RS06125 PF00440 Bacterial regulatory proteins, tetR family DW349_RS06130 PF03853 YjeF-related protein N-terminus DW349_RS06130 PF01256 Carbohydrate kinase DW349_RS06150 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase DW349_RS06150 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase DW349_RS06175 PF01728 FtsJ-like methyltransferase DW349_RS06175 PF18125 RlmM ferredoxin-like domain DW349_RS06180 PF01206 Sulfurtransferase TusA DW349_RS06185 PF01554 MatE DW349_RS06190 PF04315 Elongation factor P hydroxylase DW349_RS06195 PF00990 Diguanylate cyclase, GGDEF domain DW349_RS06195 PF00563 EAL domain DW349_RS06195 PF13188 PAS domain DW349_RS06195 PF03707 Bacterial signalling protein N terminal repeat DW349_RS06200 PF00270 DEAD/DEAH box helicase DW349_RS06200 PF00271 Helicase conserved C-terminal domain DW349_RS06205 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain DW349_RS06205 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain DW349_RS06205 PF11890 Domain of unknown function (DUF3410) DW349_RS06215 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily DW349_RS06230 PF00857 Isochorismatase family DW349_RS06255 PF00293 NUDIX domain DW349_RS06260 PF08818 Domain of unknown function (DU1801) DW349_RS06270 PF02798 Glutathione S-transferase, N-terminal domain DW349_RS06290 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DW349_RS06290 PF03466 LysR substrate binding domain DW349_RS06300 PF05724 Thiopurine S-methyltransferase (TPMT) DW349_RS06310 PF01361 Tautomerase enzyme DW349_RS06340 PF02254 TrkA-N domain DW349_RS06340 PF00999 Sodium/hydrogen exchanger family DW349_RS06345 PF07859 alpha/beta hydrolase fold DW349_RS06350 PF00155 Aminotransferase class I and II DW349_RS06355 PF01641 SelR domain DW349_RS06375 PF00440 Bacterial regulatory proteins, tetR family DW349_RS06375 PF13977 BetI-type transcriptional repressor, C-terminal DW349_RS06380 PF00171 Aldehyde dehydrogenase family DW349_RS06385 PF05199 GMC oxidoreductase DW349_RS06385 PF00732 GMC oxidoreductase DW349_RS06390 PF04069 Substrate binding domain of ABC-type glycine betaine transport system DW349_RS06395 PF00528 Binding-protein-dependent transport system inner membrane component DW349_RS06400 PF00005 ABC transporter DW349_RS06400 PF00571 CBS domain DW349_RS06405 PF01047 MarR family DW349_RS06415 PF07992 Pyridine nucleotide-disulphide oxidoreductase DW349_RS06415 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain DW349_RS06430 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DW349_RS06430 PF17200 Single Cache domain 2 DW349_RS06430 PF00672 HAMP domain DW349_RS06435 PF02637 GatB domain DW349_RS06435 PF02934 GatB/GatE catalytic domain DW349_RS06440 PF01425 Amidase DW349_RS06445 PF02686 Glu-tRNAGln amidotransferase C subunit DW349_RS06455 PF04085 rod shape-determining protein MreC DW349_RS06460 PF04093 rod shape-determining protein MreD DW349_RS06465 PF02545 Maf-like protein DW349_RS06470 PF10150 Ribonuclease E/G family DW349_RS06470 PF00575 S1 RNA binding domain DW349_RS06480 PF00795 Carbon-nitrogen hydrolase DW349_RS06495 PF01810 LysE type translocator DW349_RS06500 PF00892 EamA-like transporter family DW349_RS06505 PF00155 Aminotransferase class I and II DW349_RS06505 PF00392 Bacterial regulatory proteins, gntR family DW349_RS06510 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain DW349_RS06510 PF01411 tRNA synthetases class II (A) DW349_RS06510 PF02272 DHHA1 domain DW349_RS06515 PF02567 Phenazine biosynthesis-like protein DW349_RS06530 PF00528 Binding-protein-dependent transport system inner membrane component DW349_RS06535 PF00528 Binding-protein-dependent transport system inner membrane component DW349_RS06540 PF12857 TOBE-like domain DW349_RS06540 PF00005 ABC transporter DW349_RS06545 PF00128 Alpha amylase, catalytic domain DW349_RS06550 PF00483 Nucleotidyl transferase DW349_RS06555 PF00583 Acetyltransferase (GNAT) family DW349_RS06565 PF00893 Small Multidrug Resistance protein DW349_RS06590 PF00578 AhpC/TSA family DW349_RS06590 PF10417 C-terminal domain of 1-Cys peroxiredoxin DW349_RS06595 PF13192 Thioredoxin domain DW349_RS06595 PF07992 Pyridine nucleotide-disulphide oxidoreductase DW349_RS06610 PF02801 Beta-ketoacyl synthase, C-terminal domain DW349_RS06610 PF00109 Beta-ketoacyl synthase, N-terminal domain DW349_RS06615 PF07977 FabA-like domain DW349_RS06660 PF01979 Amidohydrolase family DW349_RS06665 PF00440 Bacterial regulatory proteins, tetR family DW349_RS06665 PF08362 YcdC-like protein, C-terminal region DW349_RS06680 PF17676 LD-carboxypeptidase C-terminal domain DW349_RS06680 PF02016 LD-carboxypeptidase N-terminal domain DW349_RS06700 PF01266 FAD dependent oxidoreductase DW349_RS06700 PF16901 C-terminal domain of alpha-glycerophosphate oxidase DW349_RS06710 PF12833 Helix-turn-helix domain DW349_RS06710 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term DW349_RS06715 PF03550 Outer membrane lipoprotein LolB DW349_RS06725 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain DW349_RS06725 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain DW349_RS06725 PF01488 Shikimate / quinate 5-dehydrogenase DW349_RS06730 PF00472 RF-1 domain DW349_RS06730 PF03462 PCRF domain DW349_RS06735 PF17827 PrmC N-terminal domain DW349_RS06735 PF13847 Methyltransferase domain DW349_RS06740 PF01575 MaoC like domain DW349_RS06745 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain DW349_RS06745 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain DW349_RS06750 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DW349_RS06750 PF00672 HAMP domain DW349_RS06750 PF02743 Cache domain DW349_RS06755 PF07085 DRTGG domain DW349_RS06755 PF01515 Phosphate acetyl/butaryl transferase DW349_RS06760 PF00871 Acetokinase family DW349_RS06765 PF08460 Bacterial SH3 domain DW349_RS06765 PF01551 Peptidase family M23 DW349_RS06770 PF13458 Periplasmic binding protein DW349_RS06785 PF02653 Branched-chain amino acid transport system / permease component DW349_RS06790 PF00005 ABC transporter DW349_RS06795 PF12399 Branched-chain amino acid ATP-binding cassette transporter DW349_RS06795 PF00005 ABC transporter DW349_RS06800 PF00795 Carbon-nitrogen hydrolase DW349_RS06810 PF02687 FtsX-like permease family DW349_RS06810 PF12704 MacB-like periplasmic core domain DW349_RS06820 PF12704 MacB-like periplasmic core domain DW349_RS06820 PF00005 ABC transporter DW349_RS06820 PF02687 FtsX-like permease family DW349_RS06830 PF01502 Phosphoribosyl-AMP cyclohydrolase DW349_RS06840 PF00285 Citrate synthase, C-terminal domain DW349_RS06845 PF03466 LysR substrate binding domain DW349_RS06845 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DW349_RS06855 PF04055 Radical SAM superfamily DW349_RS06860 PF00155 Aminotransferase class I and II DW349_RS06870 PF01544 CorA-like Mg2+ transporter protein DW349_RS06875 PF05552 Conserved TM helix DW349_RS06875 PF00924 Mechanosensitive ion channel DW349_RS06880 PF01810 LysE type translocator DW349_RS06885 PF09278 MerR, DNA binding DW349_RS06885 PF00376 MerR family regulatory protein DW349_RS06895 PF00950 ABC 3 transport family DW349_RS06900 PF00005 ABC transporter DW349_RS06905 PF01297 Zinc-uptake complex component A periplasmic DW349_RS06910 PF13419 Haloacid dehalogenase-like hydrolase DW349_RS06925 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ DW349_RS06930 PF00484 Carbonic anhydrase DW349_RS07015 PF08264 Anticodon-binding domain of tRNA DW349_RS07015 PF00133 tRNA synthetases class I (I, L, M and V) DW349_RS07015 PF10458 Valyl tRNA synthetase tRNA binding arm DW349_RS07035 PF03466 LysR substrate binding domain DW349_RS07035 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DW349_RS07040 PF02789 Cytosol aminopeptidase family, N-terminal domain DW349_RS07040 PF00883 Cytosol aminopeptidase family, catalytic domain DW349_RS07050 PF01022 Bacterial regulatory protein, arsR family DW349_RS07060 PF01219 Prokaryotic diacylglycerol kinase DW349_RS07065 PF08482 ATP-dependent helicase C-terminal DW349_RS07065 PF00271 Helicase conserved C-terminal domain DW349_RS07065 PF04408 Helicase associated domain (HA2) DW349_RS07065 PF00270 DEAD/DEAH box helicase DW349_RS07075 PF17763 Glutaminase/Asparaginase C-terminal domain DW349_RS07075 PF00710 Asparaginase, N-terminal DW349_RS07080 PF02152 Dihydroneopterin aldolase DW349_RS07085 PF01227 GTP cyclohydrolase I DW349_RS07090 PF00578 AhpC/TSA family DW349_RS07115 PF00072 Response regulator receiver domain DW349_RS07115 PF00486 Transcriptional regulatory protein, C terminal DW349_RS07120 PF08468 Methyltransferase small domain N-terminal DW349_RS07120 PF05175 Methyltransferase small domain DW349_RS07140 PF00814 Glycoprotease family DW349_RS07145 PF02673 Bacitracin resistance protein BacA DW349_RS07150 PF04445 Putative SAM-dependent methyltransferase DW349_RS07155 PF01553 Acyltransferase DW349_RS07160 PF04102 SlyX DW349_RS07165 PF00313 'Cold-shock' DNA-binding domain DW349_RS07180 PF01546 Peptidase family M20/M25/M40 DW349_RS07180 PF07687 Peptidase dimerisation domain DW349_RS07200 PF01474 Class-II DAHP synthetase family DW349_RS07205 PF13183 4Fe-4S dicluster domain DW349_RS07205 PF01565 FAD binding domain DW349_RS07205 PF02913 FAD linked oxidases, C-terminal domain DW349_RS07210 PF01743 Poly A polymerase head domain DW349_RS07210 PF00571 CBS domain DW349_RS07220 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) DW349_RS07220 PF03129 Anticodon binding domain DW349_RS07220 PF04073 Aminoacyl-tRNA editing domain DW349_RS07225 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily DW349_RS07240 PF01569 PAP2 superfamily DW349_RS07250 PF18024 Helix-turn-helix domain DW349_RS07250 PF00158 Sigma-54 interaction domain DW349_RS07255 PF02798 Glutathione S-transferase, N-terminal domain DW349_RS07255 PF14497 Glutathione S-transferase, C-terminal domain DW349_RS07260 PF00588 SpoU rRNA Methylase family DW349_RS07265 PF01595 Cyclin M transmembrane N-terminal domain DW349_RS07265 PF00571 CBS domain DW349_RS07265 PF03471 Transporter associated domain DW349_RS07275 PF02978 Signal peptide binding domain DW349_RS07275 PF02881 SRP54-type protein, helical bundle domain DW349_RS07275 PF00448 SRP54-type protein, GTPase domain DW349_RS07280 PF00886 Ribosomal protein S16 DW349_RS07285 PF05239 PRC-barrel domain DW349_RS07285 PF01782 RimM N-terminal domain DW349_RS07290 PF01746 tRNA (Guanine-1)-methyltransferase DW349_RS07295 PF01245 Ribosomal protein L19 DW349_RS07300 PF03447 Homoserine dehydrogenase, NAD binding domain DW349_RS07300 PF00742 Homoserine dehydrogenase DW349_RS07300 PF01842 ACT domain DW349_RS07305 PF14821 Threonine synthase N terminus DW349_RS07305 PF00291 Pyridoxal-phosphate dependent enzyme DW349_RS07310 PF02272 DHHA1 domain DW349_RS07310 PF01368 DHH family DW349_RS07310 PF17768 RecJ OB domain DW349_RS07320 PF00152 tRNA synthetases class II (D, K and N) DW349_RS07330 PF00004 ATPase family associated with various cellular activities (AAA) DW349_RS07330 PF05362 Lon protease (S16) C-terminal proteolytic domain DW349_RS07330 PF02190 ATP-dependent protease La (LON) substrate-binding domain DW349_RS07345 PF00072 Response regulator receiver domain DW349_RS07345 PF00486 Transcriptional regulatory protein, C terminal DW349_RS07350 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DW349_RS07365 PF12843 Putative quorum-sensing-regulated virulence factor DW349_RS07375 PF00155 Aminotransferase class I and II DW349_RS07380 PF00899 ThiF family DW349_RS07395 PF00849 RNA pseudouridylate synthase DW349_RS07400 PF00155 Aminotransferase class I and II DW349_RS07405 PF04851 Type III restriction enzyme, res subunit DW349_RS07405 PF00271 Helicase conserved C-terminal domain DW349_RS07405 PF02151 UvrB/uvrC motif DW349_RS07405 PF12344 Ultra-violet resistance protein B DW349_RS07405 PF17757 UvrB interaction domain DW349_RS07450 PF03707 Bacterial signalling protein N terminal repeat DW349_RS07450 PF00563 EAL domain DW349_RS07450 PF00990 Diguanylate cyclase, GGDEF domain DW349_RS07475 PF00717 Peptidase S24-like DW349_RS07480 PF01584 CheW-like domain DW349_RS07480 PF00072 Response regulator receiver domain DW349_RS07485 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DW349_RS07485 PF08447 PAS fold DW349_RS07520 PF00005 ABC transporter DW349_RS07520 PF00664 ABC transporter transmembrane region DW349_RS07525 PF00873 AcrB/AcrD/AcrF family DW349_RS07535 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain DW349_RS07535 PF02824 TGS domain DW349_RS07535 PF03129 Anticodon binding domain DW349_RS07535 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) DW349_RS07540 PF05198 Translation initiation factor IF-3, N-terminal domain DW349_RS07540 PF00707 Translation initiation factor IF-3, C-terminal domain DW349_RS07545 PF01632 Ribosomal protein L35 DW349_RS07550 PF00453 Ribosomal protein L20 DW349_RS07575 PF00248 Aldo/keto reductase family DW349_RS07580 PF00440 Bacterial regulatory proteins, tetR family DW349_RS07585 PF13649 Methyltransferase domain DW349_RS07590 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain DW349_RS07590 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain DW349_RS07600 PF00551 Formyl transferase DW349_RS07605 PF02769 AIR synthase related protein, C-terminal domain DW349_RS07605 PF00586 AIR synthase related protein, N-terminal domain DW349_RS07615 PF00308 Bacterial dnaA protein DW349_RS07630 PF04287 tRNA pseudouridine synthase C DW349_RS07630 PF00849 RNA pseudouridylate synthase DW349_RS07635 PF00005 ABC transporter DW349_RS07635 PF00664 ABC transporter transmembrane region DW349_RS07650 PF00202 Aminotransferase class-III DW349_RS07655 PF00106 short chain dehydrogenase DW349_RS07665 PF00392 Bacterial regulatory proteins, gntR family DW349_RS07665 PF00155 Aminotransferase class I and II DW349_RS07670 PF01464 Transglycosylase SLT domain DW349_RS07670 PF00497 Bacterial extracellular solute-binding proteins, family 3 DW349_RS07675 PF00528 Binding-protein-dependent transport system inner membrane component DW349_RS07680 PF00528 Binding-protein-dependent transport system inner membrane component DW349_RS07685 PF00005 ABC transporter DW349_RS07695 PF00005 ABC transporter DW349_RS07695 PF00571 CBS domain DW349_RS07700 PF00528 Binding-protein-dependent transport system inner membrane component DW349_RS07715 PF00108 Thiolase, N-terminal domain DW349_RS07715 PF02803 Thiolase, C-terminal domain DW349_RS07725 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DW349_RS07725 PF03466 LysR substrate binding domain DW349_RS07730 PF00175 Oxidoreductase NAD-binding domain DW349_RS07730 PF00970 Oxidoreductase FAD-binding domain DW349_RS07735 PF12697 Alpha/beta hydrolase family DW349_RS07745 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DW349_RS07775 PF01584 CheW-like domain DW349_RS07775 PF00072 Response regulator receiver domain DW349_RS07780 PF01739 CheR methyltransferase, SAM binding domain DW349_RS07780 PF03705 CheR methyltransferase, all-alpha domain DW349_RS07785 PF00460 Flagella basal body rod protein DW349_RS07790 PF00460 Flagella basal body rod protein DW349_RS07790 PF06429 Flagellar basal body rod FlgEFG protein C-terminal DW349_RS07795 PF03963 Flagellar hook capping protein - N-terminal region DW349_RS07795 PF13860 FlgD Ig-like domain DW349_RS07795 PF13861 FlgD Tudor-like domain DW349_RS07800 PF06429 Flagellar basal body rod FlgEFG protein C-terminal DW349_RS07800 PF00460 Flagella basal body rod protein DW349_RS07800 PF07559 Flagellar basal body protein FlaE DW349_RS07810 PF06429 Flagellar basal body rod FlgEFG protein C-terminal DW349_RS07810 PF00460 Flagella basal body rod protein DW349_RS07815 PF06429 Flagellar basal body rod FlgEFG protein C-terminal DW349_RS07815 PF00460 Flagella basal body rod protein DW349_RS07820 PF02107 Flagellar L-ring protein DW349_RS07825 PF02119 Flagellar P-ring protein DW349_RS07830 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase DW349_RS07830 PF10135 Rod binding protein DW349_RS07835 PF06429 Flagellar basal body rod FlgEFG protein C-terminal DW349_RS07835 PF00460 Flagella basal body rod protein DW349_RS07840 PF00700 Bacterial flagellin C-terminal helical region DW349_RS07840 PF00669 Bacterial flagellin N-terminal helical region DW349_RS07850 PF01370 NAD dependent epimerase/dehydratase family DW349_RS07855 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family DW349_RS07860 PF02350 UDP-N-acetylglucosamine 2-epimerase DW349_RS07865 PF03102 NeuB family DW349_RS07865 PF08666 SAF domain DW349_RS07875 PF00483 Nucleotidyl transferase DW349_RS07885 PF02348 Cytidylyltransferase DW349_RS07905 PF00669 Bacterial flagellin N-terminal helical region DW349_RS07905 PF00700 Bacterial flagellin C-terminal helical region DW349_RS07905 PF00669 Bacterial flagellin N-terminal helical region DW349_RS07905 PF00700 Bacterial flagellin C-terminal helical region DW349_RS07915 PF07195 Flagellar hook-associated protein 2 C-terminus DW349_RS07915 PF02465 Flagellar hook-associated protein 2 N-terminus DW349_RS07920 PF13847 Methyltransferase domain DW349_RS07925 PF02561 Flagellar protein FliS DW349_RS07935 PF00158 Sigma-54 interaction domain DW349_RS07935 PF02954 Bacterial regulatory protein, Fis family DW349_RS07935 PF06490 Flagellar regulatory protein FleQ DW349_RS07940 PF13188 PAS domain DW349_RS07940 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DW349_RS07940 PF00512 His Kinase A (phospho-acceptor) domain DW349_RS07945 PF00072 Response regulator receiver domain DW349_RS07945 PF00158 Sigma-54 interaction domain DW349_RS07945 PF02954 Bacterial regulatory protein, Fis family DW349_RS07950 PF02049 Flagellar hook-basal body complex protein FliE DW349_RS07955 PF01514 Secretory protein of YscJ/FliF family DW349_RS07955 PF08345 Flagellar M-ring protein C-terminal DW349_RS07960 PF14842 FliG N-terminal domain DW349_RS07960 PF01706 FliG C-terminal domain DW349_RS07960 PF14841 FliG middle domain DW349_RS07970 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain DW349_RS07970 PF18269 T3SS EscN ATPase C-terminal domain DW349_RS07980 PF13466 STAS domain DW349_RS07985 PF00072 Response regulator receiver domain DW349_RS07985 PF00990 Diguanylate cyclase, GGDEF domain DW349_RS08005 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term DW349_RS08005 PF02154 Flagellar motor switch protein FliM DW349_RS08010 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term DW349_RS08020 PF00813 FliP family DW349_RS08025 PF01313 Bacterial export proteins, family 3 DW349_RS08030 PF01311 Bacterial export proteins, family 1 DW349_RS08035 PF01312 FlhB HrpN YscU SpaS Family DW349_RS08040 PF00771 FHIPEP family DW349_RS08045 PF00448 SRP54-type protein, GTPase domain DW349_RS08050 PF10609 NUBPL iron-transfer P-loop NTPase DW349_RS08055 PF04545 Sigma-70, region 4 DW349_RS08055 PF04542 Sigma-70 region 2 DW349_RS08055 PF04539 Sigma-70 region 3 DW349_RS08060 PF00072 Response regulator receiver domain DW349_RS08065 PF04344 Chemotaxis phosphatase, CheZ DW349_RS08070 PF01584 CheW-like domain DW349_RS08070 PF02895 Signal transducing histidine kinase, homodimeric domain DW349_RS08070 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DW349_RS08070 PF01627 Hpt domain DW349_RS08070 PF00072 Response regulator receiver domain DW349_RS08075 PF01339 CheB methylesterase DW349_RS08075 PF00072 Response regulator receiver domain DW349_RS08080 PF01618 MotA/TolQ/ExbB proton channel family DW349_RS08085 PF13677 Membrane MotB of proton-channel complex MotA/MotB DW349_RS08085 PF00691 OmpA family DW349_RS08090 PF13614 AAA domain DW349_RS08100 PF01584 CheW-like domain DW349_RS08110 PF04333 MlaA lipoprotein DW349_RS08120 PF00072 Response regulator receiver domain DW349_RS08120 PF00486 Transcriptional regulatory protein, C terminal DW349_RS08130 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus DW349_RS08130 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus DW349_RS08155 PF05175 Methyltransferase small domain DW349_RS08160 PF01264 Chorismate synthase DW349_RS08170 PF01545 Cation efflux family DW349_RS08170 PF16916 Dimerisation domain of Zinc Transporter DW349_RS08175 PF00588 SpoU rRNA Methylase family DW349_RS08175 PF12105 SpoU, rRNA methylase, C-terminal DW349_RS08180 PF00109 Beta-ketoacyl synthase, N-terminal domain DW349_RS08180 PF02801 Beta-ketoacyl synthase, C-terminal domain DW349_RS08185 PF12833 Helix-turn-helix domain DW349_RS08185 PF01965 DJ-1/PfpI family DW349_RS08195 PF03358 NADPH-dependent FMN reductase DW349_RS08200 PF03960 ArsC family DW349_RS08215 PF11412 Disulphide bond corrector protein DsbC DW349_RS08215 PF02683 Cytochrome C biogenesis protein transmembrane region DW349_RS08225 PF01722 BolA-like protein DW349_RS08240 PF01048 Phosphorylase superfamily DW349_RS08250 PF17757 UvrB interaction domain DW349_RS08250 PF00270 DEAD/DEAH box helicase DW349_RS08250 PF02559 CarD-like/TRCF domain DW349_RS08250 PF03461 TRCF domain DW349_RS08250 PF00271 Helicase conserved C-terminal domain DW349_RS08255 PF11973 NQRA C-terminal domain DW349_RS08255 PF05896 Na(+)-translocating NADH-quinone reductase subunit A (NQRA) DW349_RS08260 PF03116 NQR2, RnfD, RnfE family DW349_RS08265 PF04205 FMN-binding domain DW349_RS08270 PF02508 Rnf-Nqr subunit, membrane protein DW349_RS08275 PF02508 Rnf-Nqr subunit, membrane protein DW349_RS08280 PF00175 Oxidoreductase NAD-binding domain DW349_RS08280 PF00111 2Fe-2S iron-sulfur cluster binding domain DW349_RS08280 PF00970 Oxidoreductase FAD-binding domain DW349_RS08285 PF02424 ApbE family DW349_RS08295 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain DW349_RS08295 PF07992 Pyridine nucleotide-disulphide oxidoreductase DW349_RS08305 PF00923 Transaldolase/Fructose-6-phosphate aldolase DW349_RS08310 PF01207 Dihydrouridine synthase (Dus) DW349_RS08315 PF06450 Bacterial Na+/H+ antiporter B (NhaB) DW349_RS08330 PF08496 Peptidase family S49 N-terminal DW349_RS08330 PF01343 Peptidase family S49 DW349_RS08335 PF01464 Transglycosylase SLT domain DW349_RS08335 PF01476 LysM domain DW349_RS08340 PF01209 ubiE/COQ5 methyltransferase family DW349_RS08345 PF00075 RNase H DW349_RS08350 PF00929 Exonuclease DW349_RS08355 PF00717 Peptidase S24-like DW349_RS08355 PF01726 LexA DNA binding domain DW349_RS08365 PF00793 DAHP synthetase I family DW349_RS08375 PF01925 Sulfite exporter TauE/SafE DW349_RS08380 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DW349_RS08380 PF03466 LysR substrate binding domain DW349_RS08385 PF01507 Phosphoadenosine phosphosulfate reductase family DW349_RS08395 PF00425 chorismate binding enzyme DW349_RS08395 PF04715 Anthranilate synthase component I, N terminal region DW349_RS08400 PF00498 FHA domain DW349_RS08405 PF00069 Protein kinase domain DW349_RS08405 PF03793 PASTA domain DW349_RS08410 PF02562 PhoH-like protein DW349_RS08410 PF13638 PIN domain DW349_RS08415 PF00196 Bacterial regulatory proteins, luxR family DW349_RS08415 PF00072 Response regulator receiver domain DW349_RS08420 PF01541 GIY-YIG catalytic domain DW349_RS08420 PF08459 UvrC Helix-hairpin-helix N-terminal DW349_RS08420 PF02151 UvrB/uvrC motif DW349_RS08425 PF01066 CDP-alcohol phosphatidyltransferase DW349_RS08445 PF02463 RecF/RecN/SMC N terminal domain DW349_RS08460 PF01077 Nitrite and sulphite reductase 4Fe-4S domain DW349_RS08460 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain DW349_RS08470 PF05088 Bacterial NAD-glutamate dehydrogenase DW349_RS08480 PF01180 Dihydroorotate dehydrogenase DW349_RS08485 PF04957 Ribosome modulation factor DW349_RS08490 PF01170 Putative RNA methylase family UPF0020 DW349_RS08490 PF10672 S-adenosylmethionine-dependent methyltransferase DW349_RS08490 PF02926 THUMP domain DW349_RS08495 PF05175 Methyltransferase small domain DW349_RS08500 PF01894 Uncharacterised protein family UPF0047 DW349_RS08505 PF05958 tRNA (Uracil-5-)-methyltransferase DW349_RS08510 PF06175 tRNA-(MS[2]IO[6]A)-hydroxylase (MiaE) DW349_RS08515 PF00149 Calcineurin-like phosphoesterase DW349_RS08520 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD DW349_RS08525 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain DW349_RS08525 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain DW349_RS08545 PF05698 Bacterial trigger factor protein (TF) C-terminus DW349_RS08545 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase DW349_RS08545 PF05697 Bacterial trigger factor protein (TF) DW349_RS08550 PF00574 Clp protease DW349_RS08555 PF07724 AAA domain (Cdc48 subfamily) DW349_RS08555 PF06689 ClpX C4-type zinc finger DW349_RS08555 PF10431 C-terminal, D2-small domain, of ClpB protein DW349_RS08560 PF00004 ATPase family associated with various cellular activities (AAA) DW349_RS08560 PF05362 Lon protease (S16) C-terminal proteolytic domain DW349_RS08560 PF02190 ATP-dependent protease La (LON) substrate-binding domain DW349_RS08565 PF00216 Bacterial DNA-binding protein DW349_RS08570 PF13145 PPIC-type PPIASE domain DW349_RS08585 PF00793 DAHP synthetase I family DW349_RS08590 PF13307 Helicase C-terminal domain DW349_RS08590 PF06733 DEAD_2 DW349_RS08595 PF04371 Porphyromonas-type peptidyl-arginine deiminase DW349_RS08605 PF02687 FtsX-like permease family DW349_RS08605 PF12704 MacB-like periplasmic core domain DW349_RS08610 PF00005 ABC transporter DW349_RS08615 PF00753 Metallo-beta-lactamase superfamily DW349_RS08615 PF03772 Competence protein DW349_RS08615 PF13567 Domain of unknown function (DUF4131) DW349_RS08620 PF01618 MotA/TolQ/ExbB proton channel family DW349_RS08625 PF02472 Biopolymer transport protein ExbD/TolR DW349_RS08630 PF02606 Tetraacyldisaccharide-1-P 4'-kinase DW349_RS08635 PF02348 Cytidylyltransferase DW349_RS08640 PF01451 Low molecular weight phosphotyrosine protein phosphatase DW349_RS08645 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain DW349_RS08645 PF01565 FAD binding domain DW349_RS08655 PF10150 Ribonuclease E/G family DW349_RS08655 PF00575 S1 RNA binding domain DW349_RS08655 PF12111 Polyribonucleotide phosphorylase C terminal DW349_RS08660 PF00849 RNA pseudouridylate synthase DW349_RS08660 PF01479 S4 domain DW349_RS08665 PF01343 Peptidase family S49 DW349_RS08665 PF06965 Na+/H+ antiporter 1 DW349_RS08670 PF02545 Maf-like protein DW349_RS08675 PF02620 Large ribosomal RNA subunit accumulation protein YceD DW349_RS08680 PF01783 Ribosomal L32p protein family DW349_RS08685 PF02504 Fatty acid synthesis protein DW349_RS08690 PF00698 Acyl transferase domain DW349_RS08700 PF00550 Phosphopantetheine attachment site DW349_RS08705 PF02801 Beta-ketoacyl synthase, C-terminal domain DW349_RS08705 PF00109 Beta-ketoacyl synthase, N-terminal domain DW349_RS08710 PF01063 Amino-transferase class IV DW349_RS08715 PF02618 YceG-like family DW349_RS08720 PF02223 Thymidylate kinase DW349_RS08725 PF09115 DNA polymerase III, delta subunit, C terminal DW349_RS08750 PF01012 Electron transfer flavoprotein domain DW349_RS08755 PF00766 Electron transfer flavoprotein FAD-binding domain DW349_RS08755 PF01012 Electron transfer flavoprotein domain DW349_RS08760 PF00512 His Kinase A (phospho-acceptor) domain DW349_RS08760 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) DW349_RS08760 PF00072 Response regulator receiver domain DW349_RS08760 PF01627 Hpt domain DW349_RS08760 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DW349_RS08760 PF00672 HAMP domain DW349_RS08765 PF00437 Type II/IV secretion system protein DW349_RS08770 PF00482 Type II secretion system (T2SS), protein F DW349_RS08775 PF08334 Type II secretion system (T2SS), protein G DW349_RS08775 PF07963 Prokaryotic N-terminal methylation motif DW349_RS08780 PF07963 Prokaryotic N-terminal methylation motif DW349_RS08780 PF12019 Type II transport protein GspH DW349_RS08785 PF02501 Type II secretion system (T2SS), protein I DW349_RS08785 PF07963 Prokaryotic N-terminal methylation motif DW349_RS08790 PF07963 Prokaryotic N-terminal methylation motif DW349_RS08790 PF11612 Type II secretion system (T2SS), protein J DW349_RS08800 PF12693 GspL periplasmic domain DW349_RS08800 PF05134 Type II secretion system (T2SS), protein L DW349_RS08810 PF00583 Acetyltransferase (GNAT) family DW349_RS08815 PF07992 Pyridine nucleotide-disulphide oxidoreductase DW349_RS08815 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain DW349_RS08825 PF00149 Calcineurin-like phosphoesterase DW349_RS08830 PF07730 Histidine kinase DW349_RS08835 PF00196 Bacterial regulatory proteins, luxR family DW349_RS08835 PF00072 Response regulator receiver domain DW349_RS08855 PF01758 Sodium Bile acid symporter family DW349_RS08860 PF03358 NADPH-dependent FMN reductase DW349_RS08870 PF01022 Bacterial regulatory protein, arsR family DW349_RS08890 PF01336 OB-fold nucleic acid binding domain DW349_RS08890 PF07733 Bacterial DNA polymerase III alpha NTPase domain DW349_RS08890 PF17657 Bacterial DNA polymerase III alpha subunit finger domain DW349_RS08890 PF02811 PHP domain DW349_RS08890 PF14579 Helix-hairpin-helix motif DW349_RS08895 PF03466 LysR substrate binding domain DW349_RS08895 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DW349_RS08905 PF02424 ApbE family DW349_RS08920 PF00578 AhpC/TSA family DW349_RS08925 PF02683 Cytochrome C biogenesis protein transmembrane region DW349_RS08925 PF11412 Disulphide bond corrector protein DsbC DW349_RS08930 PF00072 Response regulator receiver domain DW349_RS08930 PF00486 Transcriptional regulatory protein, C terminal DW349_RS08935 PF00512 His Kinase A (phospho-acceptor) domain DW349_RS08935 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DW349_RS08945 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain DW349_RS08945 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain DW349_RS08950 PF00462 Glutaredoxin DW349_RS08955 PF00899 ThiF family DW349_RS08960 PF02622 Uncharacterized ACR, COG1678 DW349_RS08965 PF02630 SCO1/SenC DW349_RS08975 PF04945 YHS domain DW349_RS08980 PF00265 Thymidine kinase DW349_RS08985 PF03372 Endonuclease/Exonuclease/phosphatase family DW349_RS09005 PF00440 Bacterial regulatory proteins, tetR family DW349_RS09010 PF00675 Insulinase (Peptidase family M16) DW349_RS09010 PF08367 Peptidase M16C associated DW349_RS09010 PF05193 Peptidase M16 inactive domain DW349_RS09015 PF00176 SNF2 family N-terminal domain DW349_RS09015 PF00271 Helicase conserved C-terminal domain DW349_RS09015 PF18339 RapA N-terminal Tudor like domain 1 DW349_RS09015 PF12137 RNA polymerase recycling family C-terminal DW349_RS09015 PF18337 RapA N-terminal Tudor like domain DW349_RS09020 PF00378 Enoyl-CoA hydratase/isomerase DW349_RS09030 PF01027 Inhibitor of apoptosis-promoting Bax1 DW349_RS09035 PF02635 DsrE/DsrF-like family DW349_RS09050 PF04358 DsrC like protein DW349_RS09055 PF02885 Glycosyl transferase family, helical bundle domain DW349_RS09055 PF00591 Glycosyl transferase family, a/b domain DW349_RS09070 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases DW349_RS09070 PF14824 Sirohaem biosynthesis protein central DW349_RS09070 PF10414 Sirohaem synthase dimerisation region DW349_RS09075 PF02403 Seryl-tRNA synthetase N-terminal domain DW349_RS09075 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) DW349_RS09080 PF02537 CrcB-like protein, Camphor Resistance (CrcB) DW349_RS09085 PF12002 MgsA AAA+ ATPase C terminal DW349_RS09085 PF16193 AAA C-terminal domain DW349_RS09085 PF00004 ATPase family associated with various cellular activities (AAA) DW349_RS09090 PF03548 Outer membrane lipoprotein carrier protein LolA DW349_RS09095 PF17854 FtsK alpha domain DW349_RS09095 PF13491 4TM region of DNA translocase FtsK/SpoIIIE DW349_RS09095 PF09397 Ftsk gamma domain DW349_RS09095 PF01580 FtsK/SpoIIIE family DW349_RS09100 PF03588 Leucyl/phenylalanyl-tRNA protein transferase DW349_RS09105 PF04377 Arginine-tRNA-protein transferase, C terminus DW349_RS09105 PF04376 Arginine-tRNA-protein transferase, N terminus DW349_RS09110 PF01176 Translation initiation factor 1A / IF-1 DW349_RS09115 PF02861 Clp amino terminal domain, pathogenicity island component DW349_RS09115 PF10431 C-terminal, D2-small domain, of ClpB protein DW349_RS09115 PF17871 AAA lid domain DW349_RS09115 PF07724 AAA domain (Cdc48 subfamily) DW349_RS09115 PF00004 ATPase family associated with various cellular activities (AAA) DW349_RS09120 PF02617 ATP-dependent Clp protease adaptor protein ClpS DW349_RS09125 PF00313 'Cold-shock' DNA-binding domain DW349_RS09130 PF03971 Monomeric isocitrate dehydrogenase DW349_RS09135 PF00849 RNA pseudouridylate synthase DW349_RS09140 PF12242 NAD(P)H binding domain of trans-2-enoyl-CoA reductase DW349_RS09140 PF07055 Enoyl reductase FAD binding domain DW349_RS09140 PF12241 Trans-2-enoyl-CoA reductase catalytic region DW349_RS09145 PF00293 NUDIX domain DW349_RS09145 PF13344 Haloacid dehalogenase-like hydrolase DW349_RS09155 PF04356 Protein of unknown function (DUF489) DW349_RS09160 PF00206 Lyase DW349_RS09160 PF08328 Adenylosuccinate lyase C-terminal DW349_RS09165 PF08007 Cupin superfamily protein DW349_RS09185 PF00183 Hsp90 protein DW349_RS09215 PF00549 CoA-ligase DW349_RS09215 PF02629 CoA binding domain DW349_RS09220 PF08442 ATP-grasp domain DW349_RS09220 PF00549 CoA-ligase DW349_RS09225 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain DW349_RS09225 PF07992 Pyridine nucleotide-disulphide oxidoreductase DW349_RS09230 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) DW349_RS09230 PF00364 Biotin-requiring enzyme DW349_RS09230 PF02817 e3 binding domain DW349_RS09235 PF02779 Transketolase, pyrimidine binding domain DW349_RS09235 PF16870 2-oxoglutarate dehydrogenase C-terminal DW349_RS09235 PF00676 Dehydrogenase E1 component DW349_RS09235 PF16078 2-oxoglutarate dehydrogenase N-terminus DW349_RS09240 PF13085 2Fe-2S iron-sulfur cluster binding domain DW349_RS09245 PF02910 Fumarate reductase flavoprotein C-term DW349_RS09245 PF00890 FAD binding domain DW349_RS09255 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit DW349_RS09260 PF00285 Citrate synthase, C-terminal domain DW349_RS09265 PF01131 DNA topoisomerase DW349_RS09265 PF01751 Toprim domain DW349_RS09265 PF01396 Topoisomerase DNA binding C4 zinc finger DW349_RS09265 PF08272 Topoisomerase I zinc-ribbon-like DW349_RS09285 PF00557 Metallopeptidase family M24 DW349_RS09300 PF01011 PQQ enzyme repeat DW349_RS09320 PF05675 Protein of unknown function (DUF817) DW349_RS09325 PF00583 Acetyltransferase (GNAT) family DW349_RS09330 PF02803 Thiolase, C-terminal domain DW349_RS09330 PF00108 Thiolase, N-terminal domain DW349_RS09335 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain DW349_RS09335 PF00378 Enoyl-CoA hydratase/isomerase DW349_RS09335 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain DW349_RS09345 PF16326 ABC transporter C-terminal domain DW349_RS09345 PF12848 ABC transporter DW349_RS09345 PF00005 ABC transporter DW349_RS09350 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion DW349_RS09355 PF00873 AcrB/AcrD/AcrF family DW349_RS09360 PF14718 Soluble lytic murein transglycosylase L domain DW349_RS09360 PF01464 Transglycosylase SLT domain DW349_RS09370 PF00072 Response regulator receiver domain DW349_RS09370 PF01584 CheW-like domain DW349_RS09390 PF03466 LysR substrate binding domain DW349_RS09390 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DW349_RS09400 PF03883 Peroxide stress protein YaaA DW349_RS09405 PF16123 Hydroxyacylglutathione hydrolase C-terminus DW349_RS09405 PF00753 Metallo-beta-lactamase superfamily DW349_RS09410 PF00248 Aldo/keto reductase family DW349_RS09430 PF01734 Patatin-like phospholipase DW349_RS09435 PF00501 AMP-binding enzyme DW349_RS09455 PF11940 Domain of unknown function (DUF3458) Ig-like fold DW349_RS09455 PF01433 Peptidase family M1 domain DW349_RS09455 PF17432 Domain of unknown function (DUF3458_C) ARM repeats DW349_RS09465 PF07023 Protein of unknown function (DUF1315) DW349_RS09470 PF01513 ATP-NAD kinase DW349_RS09480 PF01263 Aldose 1-epimerase DW349_RS09485 PF01556 DnaJ C terminal domain DW349_RS09485 PF00226 DnaJ domain DW349_RS09500 PF01106 NifU-like domain DW349_RS09500 PF01521 Iron-sulphur cluster biosynthesis DW349_RS09515 PF01654 Cytochrome bd terminal oxidase subunit I DW349_RS09520 PF02322 Cytochrome bd terminal oxidase subunit II DW349_RS09525 PF08173 Membrane bound YbgT-like protein DW349_RS09530 PF00005 ABC transporter DW349_RS09530 PF00664 ABC transporter transmembrane region DW349_RS09535 PF00664 ABC transporter transmembrane region DW349_RS09535 PF00005 ABC transporter DW349_RS09540 PF03631 Virulence factor BrkB DW349_RS09545 PF01053 Cys/Met metabolism PLP-dependent enzyme DW349_RS09560 PF00106 short chain dehydrogenase DW349_RS09575 PF00005 ABC transporter DW349_RS09580 PF00528 Binding-protein-dependent transport system inner membrane component DW349_RS09585 PF00528 Binding-protein-dependent transport system inner membrane component DW349_RS09595 PF00455 DeoR C terminal sensor domain DW349_RS09595 PF08220 DeoR-like helix-turn-helix domain DW349_RS09615 PF00749 tRNA synthetases class I (E and Q), catalytic domain DW349_RS09625 PF13185 GAF domain DW349_RS09625 PF00990 Diguanylate cyclase, GGDEF domain DW349_RS09630 PF00857 Isochorismatase family DW349_RS09640 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain DW349_RS09640 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain DW349_RS09645 PF00990 Diguanylate cyclase, GGDEF domain DW349_RS09650 PF01053 Cys/Met metabolism PLP-dependent enzyme DW349_RS09655 PF00156 Phosphoribosyl transferase domain DW349_RS09660 PF02674 Colicin V production protein DW349_RS09670 PF08245 Mur ligase middle domain DW349_RS09670 PF02875 Mur ligase family, glutamate ligase domain DW349_RS09675 PF17848 Acetyl-coA carboxylase zinc finger domain DW349_RS09675 PF01039 Carboxyl transferase domain DW349_RS09680 PF00290 Tryptophan synthase alpha chain DW349_RS09685 PF00291 Pyridoxal-phosphate dependent enzyme DW349_RS09690 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase DW349_RS09695 PF01416 tRNA pseudouridine synthase DW349_RS09705 PF01118 Semialdehyde dehydrogenase, NAD binding domain DW349_RS09705 PF02774 Semialdehyde dehydrogenase, dimerisation domain DW349_RS09710 PF00180 Isocitrate/isopropylmalate dehydrogenase DW349_RS09715 PF00694 Aconitase C-terminal domain DW349_RS09720 PF00330 Aconitase family (aconitate hydratase) DW349_RS09725 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DW349_RS09735 PF04381 Putative exonuclease, RdgC DW349_RS09745 PF06794 Uncharacterised protein family (UPF0270) DW349_RS09755 PF00533 BRCA1 C Terminus (BRCT) domain DW349_RS09755 PF03119 NAD-dependent DNA ligase C4 zinc finger domain DW349_RS09755 PF12826 Helix-hairpin-helix motif DW349_RS09755 PF03120 NAD-dependent DNA ligase OB-fold domain DW349_RS09755 PF01653 NAD-dependent DNA ligase adenylation domain DW349_RS09760 PF04354 ZipA, C-terminal FtsZ-binding domain DW349_RS09760 PF04354 ZipA, C-terminal FtsZ-binding domain DW349_RS09765 PF02463 RecF/RecN/SMC N terminal domain DW349_RS09775 PF03918 Cytochrome C biogenesis protein DW349_RS09780 PF08534 Redoxin DW349_RS09785 PF01578 Cytochrome C assembly protein DW349_RS09785 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal DW349_RS09790 PF03100 CcmE DW349_RS09795 PF04995 Heme exporter protein D (CcmD) DW349_RS09800 PF01578 Cytochrome C assembly protein DW349_RS09805 PF03379 CcmB protein DW349_RS09810 PF00005 ABC transporter DW349_RS09830 PF04408 Helicase associated domain (HA2) DW349_RS09830 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold DW349_RS09830 PF11898 Domain of unknown function (DUF3418) DW349_RS09830 PF00270 DEAD/DEAH box helicase DW349_RS09830 PF00271 Helicase conserved C-terminal domain DW349_RS09835 PF00501 AMP-binding enzyme DW349_RS09835 PF13193 AMP-binding enzyme C-terminal domain DW349_RS09855 PF03692 Putative zinc- or iron-chelating domain DW349_RS09860 PF05166 YcgL domain DW349_RS09865 PF01612 3'-5' exonuclease DW349_RS09865 PF00570 HRDC domain DW349_RS09870 PF13662 Toprim domain DW349_RS09870 PF02132 RecR protein DW349_RS09875 PF02575 YbaB/EbfC DNA-binding family DW349_RS09880 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding DW349_RS09880 PF12170 DNA polymerase III tau subunit V interacting with alpha DW349_RS09880 PF12169 DNA polymerase III subunits gamma and tau domain III DW349_RS09895 PF00875 DNA photolyase DW349_RS09895 PF03441 FAD binding domain of DNA photolyase DW349_RS09935 PF00563 EAL domain DW349_RS09935 PF00990 Diguanylate cyclase, GGDEF domain DW349_RS09935 PF03707 Bacterial signalling protein N terminal repeat DW349_RS09945 PF11791 Aconitate B N-terminal domain DW349_RS09945 PF00330 Aconitase family (aconitate hydratase) DW349_RS09945 PF06434 Aconitate hydratase 2 N-terminus DW349_RS09950 PF13847 Methyltransferase domain DW349_RS09980 PF07690 Major Facilitator Superfamily DW349_RS09985 PF00440 Bacterial regulatory proteins, tetR family DW349_RS09985 PF16859 Tetracyclin repressor-like, C-terminal domain DW349_RS10000 PF00216 Bacterial DNA-binding protein DW349_RS10005 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain DW349_RS10005 PF03483 B3/4 domain DW349_RS10005 PF01588 Putative tRNA binding domain DW349_RS10005 PF03147 Ferredoxin-fold anticodon binding domain DW349_RS10005 PF03484 tRNA synthetase B5 domain DW349_RS10010 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain DW349_RS10010 PF01409 tRNA synthetases class II core domain (F) DW349_RS10015 PF01948 Aspartate carbamoyltransferase regulatory chain, allosteric domain DW349_RS10015 PF02748 Aspartate carbamoyltransferase regulatory chain, metal binding domain DW349_RS10020 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain DW349_RS10020 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain DW349_RS10040 PF18073 Rubredoxin metal binding domain DW349_RS10050 PF00216 Bacterial DNA-binding protein DW349_RS10055 PF00575 S1 RNA binding domain DW349_RS10060 PF02224 Cytidylate kinase DW349_RS10065 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) DW349_RS10070 PF00155 Aminotransferase class I and II DW349_RS10075 PF00800 Prephenate dehydratase DW349_RS10075 PF01817 Chorismate mutase type II DW349_RS10075 PF01842 ACT domain DW349_RS10080 PF00266 Aminotransferase class-V DW349_RS10085 PF03989 DNA gyrase C-terminal domain, beta-propeller DW349_RS10085 PF00521 DNA gyrase/topoisomerase IV, subunit A DW349_RS10090 PF01979 Amidohydrolase family DW349_RS10100 PF13419 Haloacid dehalogenase-like hydrolase DW349_RS10105 PF00106 short chain dehydrogenase DW349_RS10110 PF00990 Diguanylate cyclase, GGDEF domain DW349_RS10115 PF01479 S4 domain DW349_RS10115 PF00849 RNA pseudouridylate synthase DW349_RS10120 PF04079 Segregation and condensation complex subunit ScpB DW349_RS10125 PF02616 Segregation and condensation protein ScpA DW349_RS10130 PF01300 Telomere recombination DW349_RS10135 PF02811 PHP domain DW349_RS10140 PF03795 YCII-related domain DW349_RS10150 PF00557 Metallopeptidase family M24 DW349_RS10150 PF01321 Creatinase/Prolidase N-terminal domain DW349_RS10160 PF01266 FAD dependent oxidoreductase DW349_RS10160 PF05430 S-adenosyl-L-methionine-dependent methyltransferase DW349_RS10165 PF03449 Transcription elongation factor, N-terminal DW349_RS10165 PF01272 Transcription elongation factor, GreA/GreB, C-term DW349_RS10175 PF01406 tRNA synthetases class I (C) catalytic domain DW349_RS10175 PF09190 DALR domain DW349_RS10180 PF01809 Putative membrane protein insertion efficiency factor DW349_RS10185 PF03966 Trm112p-like protein DW349_RS10190 PF00924 Mechanosensitive ion channel DW349_RS10210 PF17876 Cold shock domain DW349_RS10210 PF08206 Ribonuclease B OB domain DW349_RS10210 PF00773 RNB domain DW349_RS10210 PF00575 S1 RNA binding domain DW349_RS10215 PF16363 GDP-mannose 4,6 dehydratase DW349_RS10220 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III DW349_RS10220 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II DW349_RS10220 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain DW349_RS10220 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I DW349_RS10240 PF00005 ABC transporter DW349_RS10240 PF00664 ABC transporter transmembrane region DW349_RS10265 PF05159 Capsule polysaccharide biosynthesis protein DW349_RS10275 PF13439 Glycosyltransferase Family 4 DW349_RS10275 PF00534 Glycosyl transferases group 1 DW349_RS10290 PF02397 Bacterial sugar transferase DW349_RS10295 PF00535 Glycosyl transferase family 2 DW349_RS10315 PF13439 Glycosyltransferase Family 4 DW349_RS10315 PF00534 Glycosyl transferases group 1 DW349_RS10320 PF13683 Integrase core domain DW349_RS10320 PF13276 HTH-like domain DW349_RS10325 PF04230 Polysaccharide pyruvyl transferase DW349_RS10330 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain DW349_RS10330 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain DW349_RS10355 PF00459 Inositol monophosphatase family DW349_RS10360 PF03600 Citrate transporter DW349_RS10360 PF02080 TrkA-C domain DW349_RS10370 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain DW349_RS10370 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain DW349_RS10370 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain DW349_RS10375 PF10609 NUBPL iron-transfer P-loop NTPase DW349_RS10380 PF00483 Nucleotidyl transferase DW349_RS10380 PF01050 Mannose-6-phosphate isomerase DW349_RS10385 PF01588 Putative tRNA binding domain DW349_RS10385 PF09334 tRNA synthetases class I (M) DW349_RS10395 PF02508 Rnf-Nqr subunit, membrane protein DW349_RS10400 PF04060 Putative Fe-S cluster DW349_RS10405 PF13375 RnfC Barrel sandwich hybrid domain DW349_RS10405 PF12838 4Fe-4S dicluster domain DW349_RS10405 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit DW349_RS10405 PF10531 SLBB domain DW349_RS10410 PF03116 NQR2, RnfD, RnfE family DW349_RS10415 PF04205 FMN-binding domain DW349_RS10420 PF02508 Rnf-Nqr subunit, membrane protein DW349_RS10425 PF00730 HhH-GPD superfamily base excision DNA repair protein DW349_RS10425 PF10576 Iron-sulfur binding domain of endonuclease III DW349_RS10425 PF00633 Helix-hairpin-helix motif DW349_RS10435 PF00717 Peptidase S24-like DW349_RS10435 PF01381 Helix-turn-helix DW349_RS10460 PF00171 Aldehyde dehydrogenase family DW349_RS10465 PF00311 Phosphoenolpyruvate carboxylase DW349_RS10470 PF05191 Adenylate kinase, active site lid DW349_RS10480 PF00106 short chain dehydrogenase DW349_RS10485 PF01784 NIF3 (NGG1p interacting factor 3) DW349_RS10505 PF00043 Glutathione S-transferase, C-terminal domain DW349_RS10505 PF02798 Glutathione S-transferase, N-terminal domain DW349_RS10510 PF00263 Bacterial type II and III secretion system protein DW349_RS10510 PF03958 Bacterial type II/III secretion system short domain DW349_RS10515 PF11356 Type II secretion system protein C DW349_RS10525 PF00118 TCP-1/cpn60 chaperonin family DW349_RS10530 PF00166 Chaperonin 10 Kd subunit DW349_RS10540 PF00571 CBS domain DW349_RS10545 PF08546 Ketopantoate reductase PanE/ApbA C terminal DW349_RS10545 PF02558 Ketopantoate reductase PanE/ApbA DW349_RS10550 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DW349_RS10550 PF13426 PAS domain DW349_RS10550 PF13188 PAS domain DW349_RS10550 PF00512 His Kinase A (phospho-acceptor) domain DW349_RS10550 PF00989 PAS fold DW349_RS10555 PF01923 Cobalamin adenosyltransferase DW349_RS10565 PF01597 Glycine cleavage H-protein DW349_RS10570 PF02347 Glycine cleavage system P-protein DW349_RS10580 PF00528 Binding-protein-dependent transport system inner membrane component DW349_RS10585 PF00528 Binding-protein-dependent transport system inner membrane component DW349_RS10595 PF08402 TOBE domain DW349_RS10595 PF00005 ABC transporter DW349_RS10600 PF02028 BCCT, betaine/carnitine/choline family transporter DW349_RS10605 PF00664 ABC transporter transmembrane region DW349_RS10605 PF00005 ABC transporter DW349_RS10615 PF01177 Asp/Glu/Hydantoin racemase DW349_RS10620 PF01262 Alanine dehydrogenase/PNT, C-terminal domain DW349_RS10620 PF05222 Alanine dehydrogenase/PNT, N-terminal domain DW349_RS10625 PF00356 Bacterial regulatory proteins, lacI family DW349_RS10630 PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain DW349_RS10630 PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain DW349_RS10635 PF08544 GHMP kinases C terminal DW349_RS10635 PF00288 GHMP kinases N terminal domain DW349_RS10635 PF10509 Galactokinase galactose-binding signature DW349_RS10640 PF01263 Aldose 1-epimerase DW349_RS10645 PF17773 UPF0176 acylphosphatase like domain DW349_RS10645 PF00581 Rhodanese-like domain DW349_RS10660 PF01926 50S ribosome-binding GTPase DW349_RS10660 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal DW349_RS10670 PF12833 Helix-turn-helix domain DW349_RS10670 PF02805 Metal binding domain of Ada DW349_RS10670 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain DW349_RS10670 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain DW349_RS10675 PF13419 Haloacid dehalogenase-like hydrolase DW349_RS10685 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain DW349_RS10685 PF00391 PEP-utilising enzyme, mobile domain DW349_RS10685 PF02896 PEP-utilising enzyme, TIM barrel domain DW349_RS10690 PF03618 Kinase/pyrophosphorylase DW349_RS10700 PF04752 ChaC-like protein DW349_RS10705 PF03547 Membrane transport protein DW349_RS10715 PF03600 Citrate transporter DW349_RS10720 PF00474 Sodium:solute symporter family DW349_RS10725 PF00171 Aldehyde dehydrogenase family DW349_RS10725 PF01619 Proline dehydrogenase DW349_RS10725 PF14850 DNA-binding domain of Proline dehydrogenase DW349_RS10725 PF18327 Proline utilization A proline dehydrogenase N-terminal domain DW349_RS10740 PF13806 Rieske-like [2Fe-2S] domain DW349_RS10740 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain DW349_RS10740 PF18267 Rubredoxin NAD+ reductase C-terminal domain DW349_RS10740 PF07992 Pyridine nucleotide-disulphide oxidoreductase DW349_RS10740 PF04324 BFD-like [2Fe-2S] binding domain DW349_RS10740 PF01077 Nitrite and sulphite reductase 4Fe-4S domain DW349_RS10745 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain DW349_RS10745 PF07992 Pyridine nucleotide-disulphide oxidoreductase DW349_RS10745 PF18267 Rubredoxin NAD+ reductase C-terminal domain DW349_RS10745 PF13806 Rieske-like [2Fe-2S] domain DW349_RS10745 PF04324 BFD-like [2Fe-2S] binding domain DW349_RS10745 PF01077 Nitrite and sulphite reductase 4Fe-4S domain DW349_RS10755 PF00171 Aldehyde dehydrogenase family DW349_RS10760 PF00202 Aminotransferase class-III DW349_RS10765 PF01546 Peptidase family M20/M25/M40 DW349_RS10765 PF07687 Peptidase dimerisation domain DW349_RS10770 PF01925 Sulfite exporter TauE/SafE DW349_RS10820 PF01408 Oxidoreductase family, NAD-binding Rossmann fold DW349_RS10820 PF02894 Oxidoreductase family, C-terminal alpha/beta domain DW349_RS10830 PF00232 Glycosyl hydrolase family 1 DW349_RS10840 PF00356 Bacterial regulatory proteins, lacI family DW349_RS10860 PF02142 MGS-like domain DW349_RS10870 PF00211 Adenylate and Guanylate cyclase catalytic domain DW349_RS10875 PF01177 Asp/Glu/Hydantoin racemase DW349_RS10880 PF00141 Peroxidase DW349_RS10895 PF02567 Phenazine biosynthesis-like protein DW349_RS10905 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DW349_RS10905 PF03466 LysR substrate binding domain DW349_RS10920 PF02566 OsmC-like protein DW349_RS10935 PF00561 alpha/beta hydrolase fold DW349_RS10940 PF13302 Acetyltransferase (GNAT) domain DW349_RS10945 PF00037 4Fe-4S binding domain DW349_RS10950 PF01136 Peptidase family U32 DW349_RS10950 PF16325 Peptidase family U32 C-terminal domain DW349_RS10955 PF02954 Bacterial regulatory protein, Fis family DW349_RS10955 PF00158 Sigma-54 interaction domain DW349_RS10955 PF00072 Response regulator receiver domain DW349_RS10960 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DW349_RS10960 PF00512 His Kinase A (phospho-acceptor) domain DW349_RS10975 PF00288 GHMP kinases N terminal domain DW349_RS10975 PF08544 GHMP kinases C terminal DW349_RS10980 PF14572 Phosphoribosyl synthetase-associated domain DW349_RS10980 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase DW349_RS10985 PF01386 Ribosomal L25p family DW349_RS10985 PF14693 Ribosomal protein TL5, C-terminal domain DW349_RS10990 PF01195 Peptidyl-tRNA hydrolase DW349_RS10995 PF06071 Protein of unknown function (DUF933) DW349_RS10995 PF01926 50S ribosome-binding GTPase DW349_RS11005 PF00732 GMC oxidoreductase DW349_RS11005 PF05199 GMC oxidoreductase DW349_RS11015 PF05199 GMC oxidoreductase DW349_RS11015 PF00732 GMC oxidoreductase DW349_RS11020 PF01266 FAD dependent oxidoreductase DW349_RS11025 PF12852 Cupin DW349_RS11025 PF12833 Helix-turn-helix domain DW349_RS11035 PF00392 Bacterial regulatory proteins, gntR family DW349_RS11035 PF07729 FCD domain DW349_RS11040 PF00005 ABC transporter DW349_RS11040 PF08352 Oligopeptide/dipeptide transporter, C-terminal region DW349_RS11045 PF08352 Oligopeptide/dipeptide transporter, C-terminal region DW349_RS11045 PF00005 ABC transporter DW349_RS11050 PF00528 Binding-protein-dependent transport system inner membrane component DW349_RS11055 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle DW349_RS11065 PF07687 Peptidase dimerisation domain DW349_RS11065 PF01546 Peptidase family M20/M25/M40 DW349_RS11070 PF05343 M42 glutamyl aminopeptidase DW349_RS11075 PF03707 Bacterial signalling protein N terminal repeat DW349_RS11075 PF00990 Diguanylate cyclase, GGDEF domain DW349_RS11075 PF00563 EAL domain DW349_RS11085 PF00724 NADH:flavin oxidoreductase / NADH oxidase family DW349_RS11095 PF02678 Pirin DW349_RS11095 PF17954 Quercetinase C-terminal cupin domain DW349_RS11105 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion DW349_RS11110 PF00873 AcrB/AcrD/AcrF family DW349_RS11115 PF00005 ABC transporter DW349_RS11120 PF01032 FecCD transport family DW349_RS11125 PF01032 FecCD transport family DW349_RS11130 PF01497 Periplasmic binding protein DW349_RS11140 PF00440 Bacterial regulatory proteins, tetR family DW349_RS11140 PF16859 Tetracyclin repressor-like, C-terminal domain DW349_RS11145 PF00356 Bacterial regulatory proteins, lacI family DW349_RS11150 PF03009 Glycerophosphoryl diester phosphodiesterase family DW349_RS11155 PF00005 ABC transporter DW349_RS11155 PF08402 TOBE domain DW349_RS11160 PF00528 Binding-protein-dependent transport system inner membrane component DW349_RS11190 PF00929 Exonuclease DW349_RS11190 PF08411 Exonuclease C-terminal DW349_RS11195 PF01381 Helix-turn-helix DW349_RS11195 PF07883 Cupin domain DW349_RS11200 PF03594 Benzoate membrane transport protein DW349_RS11205 PF00378 Enoyl-CoA hydratase/isomerase DW349_RS11210 PF05683 Fumarase C-terminus DW349_RS11210 PF05681 Fumarate hydratase (Fumerase) DW349_RS11215 PF13439 Glycosyltransferase Family 4 DW349_RS11215 PF00534 Glycosyl transferases group 1 DW349_RS11230 PF01230 HIT domain DW349_RS11235 PF00294 pfkB family carbohydrate kinase DW349_RS11240 PF01156 Inosine-uridine preferring nucleoside hydrolase DW349_RS11255 PF00691 OmpA family DW349_RS11255 PF13677 Membrane MotB of proton-channel complex MotA/MotB DW349_RS11260 PF01553 Acyltransferase DW349_RS11270 PF02391 MoaE protein DW349_RS11275 PF02597 ThiS family DW349_RS11280 PF01967 MoaC family DW349_RS11285 PF00994 Probable molybdopterin binding domain DW349_RS11290 PF04055 Radical SAM superfamily DW349_RS11290 PF06463 Molybdenum Cofactor Synthesis C DW349_RS11295 PF04293 SpoVR like protein DW349_RS11300 PF04285 Protein of unknown function (DUF444) DW349_RS11305 PF06798 PrkA serine protein kinase C-terminal domain DW349_RS11305 PF08298 PrkA AAA domain DW349_RS11310 PF03167 Uracil DNA glycosylase superfamily DW349_RS11315 PF00107 Zinc-binding dehydrogenase DW349_RS11315 PF08240 Alcohol dehydrogenase GroES-like domain DW349_RS11320 PF00156 Phosphoribosyl transferase domain DW349_RS11325 PF00860 Permease family DW349_RS11330 PF06039 Malate:quinone oxidoreductase (Mqo) DW349_RS11335 PF00842 Alanine racemase, C-terminal domain DW349_RS11335 PF01168 Alanine racemase, N-terminal domain DW349_RS11340 PF03796 DnaB-like helicase C terminal domain DW349_RS11340 PF00772 DnaB-like helicase N terminal domain DW349_RS11345 PF03948 Ribosomal protein L9, C-terminal domain DW349_RS11345 PF01281 Ribosomal protein L9, N-terminal domain DW349_RS11355 PF01084 Ribosomal protein S18 DW349_RS11360 PF01250 Ribosomal protein S6 DW349_RS11380 PF00005 ABC transporter DW349_RS11380 PF12848 ABC transporter DW349_RS11400 PF00581 Rhodanese-like domain DW349_RS11435 PF00294 pfkB family carbohydrate kinase DW349_RS11460 PF00483 Nucleotidyl transferase DW349_RS11465 PF00534 Glycosyl transferases group 1 DW349_RS11465 PF08323 Starch synthase catalytic domain DW349_RS11470 PF01738 Dienelactone hydrolase family DW349_RS11475 PF18254 HMW1 domain 2 DW349_RS11475 PF18071 HMW1C N-terminal DW349_RS11530 PF14437 MafB19-like deaminase DW349_RS11535 PF02798 Glutathione S-transferase, N-terminal domain DW349_RS11555 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DW349_RS11555 PF00672 HAMP domain DW349_RS11555 PF02743 Cache domain DW349_RS11570 PF00378 Enoyl-CoA hydratase/isomerase DW349_RS11575 PF02798 Glutathione S-transferase, N-terminal domain DW349_RS11580 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DW349_RS11580 PF03466 LysR substrate binding domain DW349_RS11585 PF02540 NAD synthase DW349_RS11585 PF00117 Glutamine amidotransferase class-I DW349_RS11585 PF00958 GMP synthase C terminal domain DW349_RS11590 PF00478 IMP dehydrogenase / GMP reductase domain DW349_RS11590 PF00571 CBS domain DW349_RS11595 PF02601 Exonuclease VII, large subunit DW349_RS11595 PF13742 OB-fold nucleic acid binding domain DW349_RS11600 PF12833 Helix-turn-helix domain DW349_RS11605 PF01926 50S ribosome-binding GTPase DW349_RS11605 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal DW349_RS11610 PF13360 PQQ-like domain DW349_RS11615 PF09976 Tetratricopeptide repeat-like domain DW349_RS11620 PF13393 Histidyl-tRNA synthetase DW349_RS11620 PF03129 Anticodon binding domain DW349_RS11625 PF04551 GcpE protein DW349_RS11635 PF04055 Radical SAM superfamily DW349_RS11640 PF00334 Nucleoside diphosphate kinase DW349_RS11645 PF02657 Fe-S metabolism associated domain DW349_RS11650 PF01883 Iron-sulfur cluster assembly protein DW349_RS11655 PF01521 Iron-sulphur cluster biosynthesis DW349_RS11660 PF00266 Aminotransferase class-V DW349_RS11665 PF01458 Uncharacterized protein family (UPF0051) DW349_RS11670 PF00005 ABC transporter DW349_RS11675 PF01458 Uncharacterized protein family (UPF0051) DW349_RS11680 PF00266 Aminotransferase class-V DW349_RS11685 PF02082 Transcriptional regulator DW349_RS11695 PF01758 Sodium Bile acid symporter family DW349_RS11710 PF01040 UbiA prenyltransferase family DW349_RS11720 PF00106 short chain dehydrogenase DW349_RS11725 PF00440 Bacterial regulatory proteins, tetR family DW349_RS11730 PF00202 Aminotransferase class-III DW349_RS11750 PF00210 Ferritin-like domain DW349_RS11755 PF00210 Ferritin-like domain DW349_RS11770 PF02769 AIR synthase related protein, C-terminal domain DW349_RS11770 PF00586 AIR synthase related protein, N-terminal domain DW349_RS11785 PF00795 Carbon-nitrogen hydrolase DW349_RS11795 PF00392 Bacterial regulatory proteins, gntR family DW349_RS11795 PF00155 Aminotransferase class I and II DW349_RS11800 PF01965 DJ-1/PfpI family DW349_RS11820 PF03466 LysR substrate binding domain DW349_RS11820 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DW349_RS11835 PF02652 L-lactate permease DW349_RS11845 PF00005 ABC transporter DW349_RS11855 PF16363 GDP-mannose 4,6 dehydratase DW349_RS11860 PF08669 Glycine cleavage T-protein C-terminal barrel domain DW349_RS11860 PF01571 Aminomethyltransferase folate-binding domain DW349_RS11865 PF03453 MoeA N-terminal region (domain I and II) DW349_RS11865 PF00994 Probable molybdopterin binding domain DW349_RS11865 PF03454 MoeA C-terminal region (domain IV) DW349_RS11875 PF01618 MotA/TolQ/ExbB proton channel family DW349_RS11880 PF02472 Biopolymer transport protein ExbD/TolR DW349_RS11885 PF01521 Iron-sulphur cluster biosynthesis DW349_RS11885 PF01106 NifU-like domain DW349_RS11890 PF03167 Uracil DNA glycosylase superfamily DW349_RS11895 PF00106 short chain dehydrogenase DW349_RS11905 PF02810 SEC-C motif DW349_RS11915 PF04287 tRNA pseudouridine synthase C DW349_RS11920 PF11849 Domain of unknown function (DUF3369) DW349_RS11925 PF00749 tRNA synthetases class I (E and Q), catalytic domain DW349_RS11925 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain DW349_RS11930 PF01131 DNA topoisomerase DW349_RS11930 PF01751 Toprim domain DW349_RS11935 PF08240 Alcohol dehydrogenase GroES-like domain DW349_RS11935 PF00107 Zinc-binding dehydrogenase DW349_RS11940 PF01915 Glycosyl hydrolase family 3 C-terminal domain DW349_RS11940 PF00933 Glycosyl hydrolase family 3 N terminal domain DW349_RS11940 PF14310 Fibronectin type III-like domain DW349_RS11945 PF02798 Glutathione S-transferase, N-terminal domain DW349_RS11945 PF00043 Glutathione S-transferase, C-terminal domain DW349_RS11970 PF00672 HAMP domain DW349_RS11970 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DW349_RS11970 PF12729 Four helix bundle sensory module for signal transduction DW349_RS11975 PF00005 ABC transporter DW349_RS11980 PF00528 Binding-protein-dependent transport system inner membrane component DW349_RS11995 PF01212 Beta-eliminating lyase DW349_RS12000 PF08534 Redoxin DW349_RS12010 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase DW349_RS12025 PF00005 ABC transporter DW349_RS12025 PF08352 Oligopeptide/dipeptide transporter, C-terminal region DW349_RS12030 PF12911 N-terminal TM domain of oligopeptide transport permease C DW349_RS12030 PF00528 Binding-protein-dependent transport system inner membrane component DW349_RS12035 PF00528 Binding-protein-dependent transport system inner membrane component DW349_RS12040 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle DW349_RS12045 PF04304 Protein of unknown function (DUF454) DW349_RS12075 PF00459 Inositol monophosphatase family DW349_RS12090 PF12833 Helix-turn-helix domain DW349_RS12095 PF12833 Helix-turn-helix domain DW349_RS12110 PF00578 AhpC/TSA family DW349_RS12110 PF10417 C-terminal domain of 1-Cys peroxiredoxin DW349_RS12120 PF17912 MalK OB fold domain DW349_RS12120 PF00005 ABC transporter DW349_RS12130 PF01081 KDPG and KHG aldolase DW349_RS12135 PF02685 Glucokinase DW349_RS12140 PF00920 Dehydratase family DW349_RS12145 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase DW349_RS12150 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain DW349_RS12150 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain DW349_RS12155 PF01380 SIS domain DW349_RS12155 PF01418 Helix-turn-helix domain, rpiR family DW349_RS12160 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain DW349_RS12160 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain DW349_RS12165 PF00224 Pyruvate kinase, barrel domain DW349_RS12165 PF02887 Pyruvate kinase, alpha/beta domain DW349_RS12170 PF17831 Pyruvate dehydrogenase E1 component middle domain DW349_RS12170 PF00456 Transketolase, thiamine diphosphate binding domain DW349_RS12175 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) DW349_RS12175 PF02817 e3 binding domain DW349_RS12175 PF00364 Biotin-requiring enzyme DW349_RS12185 PF00106 short chain dehydrogenase DW349_RS12190 PF13847 Methyltransferase domain DW349_RS12195 PF03641 Possible lysine decarboxylase DW349_RS12205 PF00582 Universal stress protein family DW349_RS12210 PF01740 STAS domain DW349_RS12210 PF00916 Sulfate permease family DW349_RS12215 PF01906 Putative heavy-metal-binding DW349_RS12225 PF13426 PAS domain DW349_RS12225 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DW349_RS12225 PF08447 PAS fold DW349_RS12230 PF00149 Calcineurin-like phosphoesterase DW349_RS12235 PF00132 Bacterial transferase hexapeptide (six repeats) DW349_RS12235 PF06426 Serine acetyltransferase, N-terminal DW349_RS12240 PF00588 SpoU rRNA Methylase family DW349_RS12245 PF00459 Inositol monophosphatase family DW349_RS12255 PF08240 Alcohol dehydrogenase GroES-like domain DW349_RS12255 PF00107 Zinc-binding dehydrogenase DW349_RS12285 PF00072 Response regulator receiver domain DW349_RS12285 PF00158 Sigma-54 interaction domain DW349_RS12285 PF02954 Bacterial regulatory protein, Fis family DW349_RS12295 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion DW349_RS12300 PF00005 ABC transporter DW349_RS12315 PF17770 Ribonuclease J C-terminal domain DW349_RS12315 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain DW349_RS12315 PF12706 Beta-lactamase superfamily domain DW349_RS12325 PF00155 Aminotransferase class I and II DW349_RS12325 PF00392 Bacterial regulatory proteins, gntR family DW349_RS12340 PF00043 Glutathione S-transferase, C-terminal domain DW349_RS12340 PF13417 Glutathione S-transferase, N-terminal domain DW349_RS12355 PF00916 Sulfate permease family DW349_RS12355 PF01740 STAS domain DW349_RS12360 PF00753 Metallo-beta-lactamase superfamily DW349_RS12365 PF04143 Sulphur transport DW349_RS12380 PF00392 Bacterial regulatory proteins, gntR family DW349_RS12380 PF00155 Aminotransferase class I and II DW349_RS12385 PF01810 LysE type translocator DW349_RS12390 PF01594 AI-2E family transporter DW349_RS12400 PF09242 Flavocytochrome c sulphide dehydrogenase, flavin-binding DW349_RS12400 PF07992 Pyridine nucleotide-disulphide oxidoreductase DW349_RS12400 PF10518 TAT (twin-arginine translocation) pathway signal sequence DW349_RS12405 PF00990 Diguanylate cyclase, GGDEF domain DW349_RS12410 PF09285 Elongation factor P, C-terminal DW349_RS12410 PF08207 Elongation factor P (EF-P) KOW-like domain DW349_RS12410 PF01132 Elongation factor P (EF-P) OB domain DW349_RS12425 PF01274 Malate synthase DW349_RS12430 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DW349_RS12430 PF03466 LysR substrate binding domain DW349_RS12435 PF00463 Isocitrate lyase family DW349_RS12440 PF01409 tRNA synthetases class II core domain (F) DW349_RS12440 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain DW349_RS12445 PF00497 Bacterial extracellular solute-binding proteins, family 3 DW349_RS12450 PF00528 Binding-protein-dependent transport system inner membrane component DW349_RS12455 PF00528 Binding-protein-dependent transport system inner membrane component DW349_RS12460 PF00005 ABC transporter DW349_RS12470 PF18693 TRAM domain DW349_RS12470 PF04055 Radical SAM superfamily DW349_RS12470 PF00919 Uncharacterized protein family UPF0004 DW349_RS12475 PF00313 'Cold-shock' DNA-binding domain DW349_RS12485 PF00472 RF-1 domain DW349_RS12490 PF00593 TonB dependent receptor DW349_RS12490 PF07715 TonB-dependent Receptor Plug Domain DW349_RS12495 PF12833 Helix-turn-helix domain DW349_RS12505 PF07690 Major Facilitator Superfamily DW349_RS12510 PF00266 Aminotransferase class-V DW349_RS12515 PF01037 Lrp/AsnC ligand binding domain DW349_RS12525 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DW349_RS12525 PF02203 Tar ligand binding domain homologue DW349_RS12525 PF00672 HAMP domain DW349_RS12535 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain DW349_RS12535 PF02777 Iron/manganese superoxide dismutases, C-terminal domain DW349_RS12560 PF01914 MarC family integral membrane protein DW349_RS12565 PF00107 Zinc-binding dehydrogenase DW349_RS12565 PF08240 Alcohol dehydrogenase GroES-like domain DW349_RS12570 PF00155 Aminotransferase class I and II DW349_RS12585 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component DW349_RS12590 PF03480 Bacterial extracellular solute-binding protein, family 7 DW349_RS12600 PF01262 Alanine dehydrogenase/PNT, C-terminal domain DW349_RS12600 PF05222 Alanine dehydrogenase/PNT, N-terminal domain DW349_RS12600 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch DW349_RS12605 PF02233 NAD(P) transhydrogenase beta subunit DW349_RS12610 PF01261 Xylose isomerase-like TIM barrel DW349_RS12615 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain DW349_RS12615 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain DW349_RS12615 PF00205 Thiamine pyrophosphate enzyme, central domain DW349_RS12620 PF00294 pfkB family carbohydrate kinase DW349_RS12625 PF01408 Oxidoreductase family, NAD-binding Rossmann fold DW349_RS12625 PF02894 Oxidoreductase family, C-terminal alpha/beta domain DW349_RS12630 PF00005 ABC transporter DW349_RS12635 PF02653 Branched-chain amino acid transport system / permease component DW349_RS12650 PF02894 Oxidoreductase family, C-terminal alpha/beta domain DW349_RS12650 PF01408 Oxidoreductase family, NAD-binding Rossmann fold DW349_RS12655 PF04962 KduI/IolB family DW349_RS12660 PF00999 Sodium/hydrogen exchanger family DW349_RS12660 PF02254 TrkA-N domain DW349_RS12670 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal DW349_RS12670 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III DW349_RS12680 PF00085 Thioredoxin DW349_RS12685 PF05193 Peptidase M16 inactive domain DW349_RS12685 PF00675 Insulinase (Peptidase family M16) DW349_RS12695 PF01791 DeoC/LacD family aldolase DW349_RS12700 PF00591 Glycosyl transferase family, a/b domain DW349_RS12700 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain DW349_RS12700 PF02885 Glycosyl transferase family, helical bundle domain DW349_RS12705 PF01676 Metalloenzyme superfamily DW349_RS12715 PF08032 RNA 2'-O ribose methyltransferase substrate binding DW349_RS12715 PF00588 SpoU rRNA Methylase family DW349_RS12720 PF17876 Cold shock domain DW349_RS12720 PF08461 Ribonuclease R winged-helix domain DW349_RS12720 PF08206 Ribonuclease B OB domain DW349_RS12720 PF00773 RNB domain DW349_RS12720 PF00575 S1 RNA binding domain DW349_RS12725 PF00709 Adenylosuccinate synthetase DW349_RS12730 PF13393 Histidyl-tRNA synthetase DW349_RS12735 PF01145 SPFH domain / Band 7 family DW349_RS12740 PF01145 SPFH domain / Band 7 family DW349_RS12740 PF12221 Bacterial membrane protein N terminal DW349_RS12745 PF16360 GTP-binding GTPase Middle Region DW349_RS12745 PF13167 GTP-binding GTPase N-terminal DW349_RS12745 PF01926 50S ribosome-binding GTPase DW349_RS12750 PF17209 Hfq protein DW349_RS12760 PF01119 DNA mismatch repair protein, C-terminal domain DW349_RS12760 PF08676 MutL C terminal dimerisation domain DW349_RS12765 PF01520 N-acetylmuramoyl-L-alanine amidase DW349_RS12765 PF11741 AMIN domain DW349_RS12770 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE DW349_RS12775 PF08331 Domain of unknown function (DUF1730) DW349_RS12780 PF01205 Uncharacterized protein family UPF0029 DW349_RS12780 PF09186 Domain of unknown function (DUF1949) DW349_RS12790 PF00520 Ion transport protein DW349_RS12790 PF00027 Cyclic nucleotide-binding domain DW349_RS12800 PF00724 NADH:flavin oxidoreductase / NADH oxidase family DW349_RS12800 PF07992 Pyridine nucleotide-disulphide oxidoreductase DW349_RS12805 PF12833 Helix-turn-helix domain DW349_RS12805 PF02311 AraC-like ligand binding domain DW349_RS12810 PF01494 FAD binding domain DW349_RS12815 PF01037 Lrp/AsnC ligand binding domain DW349_RS12815 PF13404 AsnC-type helix-turn-helix domain DW349_RS12820 PF03480 Bacterial extracellular solute-binding protein, family 7 DW349_RS12830 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component DW349_RS12835 PF12792 CSS motif domain associated with EAL DW349_RS12835 PF00563 EAL domain DW349_RS12860 PF00072 Response regulator receiver domain DW349_RS12860 PF00196 Bacterial regulatory proteins, luxR family DW349_RS12865 PF03358 NADPH-dependent FMN reductase DW349_RS12890 PF00793 DAHP synthetase I family DW349_RS12925 PF01979 Amidohydrolase family DW349_RS12930 PF02547 Queuosine biosynthesis protein DW349_RS12935 PF01702 Queuine tRNA-ribosyltransferase DW349_RS12940 PF02699 Preprotein translocase subunit DW349_RS12945 PF07549 SecD/SecF GG Motif DW349_RS12945 PF02355 Protein export membrane protein DW349_RS12945 PF13721 SecD export protein N-terminal TM region DW349_RS12950 PF02355 Protein export membrane protein DW349_RS12950 PF07549 SecD/SecF GG Motif DW349_RS12955 PF00579 tRNA synthetases class I (W and Y) DW349_RS12965 PF00694 Aconitase C-terminal domain DW349_RS12965 PF00330 Aconitase family (aconitate hydratase) DW349_RS12975 PF01810 LysE type translocator DW349_RS12980 PF03466 LysR substrate binding domain DW349_RS12980 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DW349_RS12985 PF00210 Ferritin-like domain DW349_RS12990 PF00593 TonB dependent receptor DW349_RS12990 PF07715 TonB-dependent Receptor Plug Domain DW349_RS12995 PF00593 TonB dependent receptor DW349_RS12995 PF07715 TonB-dependent Receptor Plug Domain DW349_RS13010 PF08264 Anticodon-binding domain of tRNA DW349_RS13010 PF00133 tRNA synthetases class I (I, L, M and V) DW349_RS13010 PF13603 Leucyl-tRNA synthetase, Domain 2 DW349_RS13020 PF00072 Response regulator receiver domain DW349_RS13020 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) DW349_RS13020 PF00512 His Kinase A (phospho-acceptor) domain DW349_RS13020 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DW349_RS13020 PF01627 Hpt domain DW349_RS13020 PF00672 HAMP domain DW349_RS13035 PF00764 Arginosuccinate synthase DW349_RS13040 PF00072 Response regulator receiver domain DW349_RS13040 PF02954 Bacterial regulatory protein, Fis family DW349_RS13040 PF00158 Sigma-54 interaction domain DW349_RS13045 PF00989 PAS fold DW349_RS13045 PF00512 His Kinase A (phospho-acceptor) domain DW349_RS13045 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DW349_RS13050 PF00563 EAL domain DW349_RS13050 PF03707 Bacterial signalling protein N terminal repeat DW349_RS13050 PF00990 Diguanylate cyclase, GGDEF domain DW349_RS13055 PF12568 Acetyltransferase (GNAT) domain, PanZ DW349_RS13060 PF00475 Imidazoleglycerol-phosphate dehydratase DW349_RS13065 PF00117 Glutamine amidotransferase class-I DW349_RS13070 PF00977 Histidine biosynthesis protein DW349_RS13075 PF00977 Histidine biosynthesis protein DW349_RS13105 PF00083 Sugar (and other) transporter DW349_RS13110 PF00370 FGGY family of carbohydrate kinases, N-terminal domain DW349_RS13110 PF02782 FGGY family of carbohydrate kinases, C-terminal domain DW349_RS13130 PF17874 MalT-like TPR region DW349_RS13130 PF00196 Bacterial regulatory proteins, luxR family DW349_RS13135 PF13614 AAA domain DW349_RS13140 PF00365 Phosphofructokinase DW349_RS13145 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) DW349_RS13150 PF00719 Inorganic pyrophosphatase DW349_RS13165 PF01220 Dehydroquinase class II DW349_RS13170 PF00364 Biotin-requiring enzyme DW349_RS13175 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain DW349_RS13175 PF00289 Biotin carboxylase, N-terminal domain DW349_RS13175 PF02785 Biotin carboxylase C-terminal domain DW349_RS13190 PF01207 Dihydrouridine synthase (Dus) DW349_RS13195 PF02954 Bacterial regulatory protein, Fis family DW349_RS13200 PF01808 AICARFT/IMPCHase bienzyme DW349_RS13200 PF02142 MGS-like domain DW349_RS13205 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain DW349_RS13205 PF02843 Phosphoribosylglycinamide synthetase, C domain DW349_RS13205 PF02844 Phosphoribosylglycinamide synthetase, N domain DW349_RS13210 PF00072 Response regulator receiver domain DW349_RS13210 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DW349_RS13210 PF17149 Periplasmic sensor domain found in signal transduction proteins DW349_RS13210 PF00672 HAMP domain DW349_RS13210 PF01627 Hpt domain DW349_RS13210 PF00512 His Kinase A (phospho-acceptor) domain DW349_RS13215 PF03232 Ubiquinone biosynthesis protein COQ7 DW349_RS13220 PF01928 CYTH domain DW349_RS13225 PF02675 S-adenosylmethionine decarboxylase DW349_RS13230 PF02566 OsmC-like protein DW349_RS13235 PF13545 Crp-like helix-turn-helix domain DW349_RS13235 PF00027 Cyclic nucleotide-binding domain DW349_RS13240 PF00696 Amino acid kinase family DW349_RS13240 PF00583 Acetyltransferase (GNAT) family DW349_RS13245 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family DW349_RS13250 PF01625 Peptide methionine sulfoxide reductase DW349_RS13255 PF07238 PilZ domain DW349_RS13260 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle DW349_RS13265 PF00528 Binding-protein-dependent transport system inner membrane component DW349_RS13270 PF00528 Binding-protein-dependent transport system inner membrane component DW349_RS13270 PF12911 N-terminal TM domain of oligopeptide transport permease C DW349_RS13275 PF00005 ABC transporter DW349_RS13275 PF08352 Oligopeptide/dipeptide transporter, C-terminal region DW349_RS13280 PF00005 ABC transporter DW349_RS13280 PF08352 Oligopeptide/dipeptide transporter, C-terminal region DW349_RS13295 PF00920 Dehydratase family DW349_RS13300 PF14815 NUDIX domain DW349_RS13300 PF10576 Iron-sulfur binding domain of endonuclease III DW349_RS13300 PF00633 Helix-hairpin-helix motif DW349_RS13300 PF00730 HhH-GPD superfamily base excision DNA repair protein DW349_RS13305 PF04362 Bacterial Fe(2+) trafficking DW349_RS13320 PF02424 ApbE family DW349_RS13345 PF00578 AhpC/TSA family DW349_RS13350 PF07681 DoxX DW349_RS13355 PF01026 TatD related DNase DW349_RS13370 PF03572 Peptidase family S41 DW349_RS13370 PF13180 PDZ domain DW349_RS13375 PF01551 Peptidase family M23 DW349_RS13380 PF01676 Metalloenzyme superfamily DW349_RS13380 PF06415 BPG-independent PGAM N-terminus (iPGM_N) DW349_RS13385 PF00581 Rhodanese-like domain DW349_RS13390 PF00462 Glutaredoxin DW349_RS13395 PF02556 Preprotein translocase subunit SecB DW349_RS13400 PF00990 Diguanylate cyclase, GGDEF domain DW349_RS13400 PF03707 Bacterial signalling protein N terminal repeat DW349_RS13400 PF00563 EAL domain DW349_RS13405 PF01380 SIS domain DW349_RS13405 PF01418 Helix-turn-helix domain, rpiR family DW349_RS13415 PF01925 Sulfite exporter TauE/SafE DW349_RS13420 PF00266 Aminotransferase class-V DW349_RS13425 PF07687 Peptidase dimerisation domain DW349_RS13425 PF01546 Peptidase family M20/M25/M40 DW349_RS13430 PF02568 Thiamine biosynthesis protein (ThiI) DW349_RS13430 PF02926 THUMP domain DW349_RS13435 PF03951 Glutamine synthetase, beta-Grasp domain DW349_RS13435 PF00120 Glutamine synthetase, catalytic domain DW349_RS13445 PF10369 Small subunit of acetolactate synthase DW349_RS13450 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain DW349_RS13450 PF00205 Thiamine pyrophosphate enzyme, central domain DW349_RS13450 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain DW349_RS13465 PF08267 Cobalamin-independent synthase, N-terminal domain DW349_RS13465 PF01717 Cobalamin-independent synthase, Catalytic domain DW349_RS13470 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DW349_RS13470 PF03466 LysR substrate binding domain DW349_RS13480 PF00883 Cytosol aminopeptidase family, catalytic domain DW349_RS13480 PF02789 Cytosol aminopeptidase family, N-terminal domain DW349_RS13485 PF00226 DnaJ domain DW349_RS13485 PF05099 Tellurite resistance protein TerB DW349_RS13490 PF04453 LPS transport system D DW349_RS13490 PF03968 OstA-like protein DW349_RS13495 PF00639 PPIC-type PPIASE domain DW349_RS13495 PF09312 SurA N-terminal domain DW349_RS13500 PF04166 Pyridoxal phosphate biosynthetic protein PdxA DW349_RS13505 PF00398 Ribosomal RNA adenine dimethylase DW349_RS13510 PF00149 Calcineurin-like phosphoesterase DW349_RS13540 PF01743 Poly A polymerase head domain DW349_RS13540 PF01966 HD domain DW349_RS13540 PF12627 Probable RNA and SrmB- binding site of polymerase A DW349_RS13550 PF03733 Inner membrane component domain DW349_RS13555 PF03458 UPF0126 domain DW349_RS13580 PF02441 Flavoprotein DW349_RS13605 PF13416 Bacterial extracellular solute-binding protein DW349_RS13610 PF00528 Binding-protein-dependent transport system inner membrane component DW349_RS13615 PF00528 Binding-protein-dependent transport system inner membrane component DW349_RS13620 PF00005 ABC transporter DW349_RS13620 PF08402 TOBE domain DW349_RS13630 PF02690 Na+/Pi-cotransporter DW349_RS13635 PF00248 Aldo/keto reductase family DW349_RS13640 PF13407 Periplasmic binding protein domain DW349_RS13645 PF02653 Branched-chain amino acid transport system / permease component DW349_RS13650 PF00005 ABC transporter DW349_RS13655 PF01408 Oxidoreductase family, NAD-binding Rossmann fold DW349_RS13655 PF02894 Oxidoreductase family, C-terminal alpha/beta domain DW349_RS13660 PF01261 Xylose isomerase-like TIM barrel DW349_RS13665 PF00356 Bacterial regulatory proteins, lacI family DW349_RS13680 PF09831 Uncharacterized protein conserved in bacteria (DUF2058) DW349_RS13685 PF12729 Four helix bundle sensory module for signal transduction DW349_RS13685 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DW349_RS13685 PF00672 HAMP domain DW349_RS13700 PF05336 L-rhamnose mutarotase DW349_RS13705 PF02653 Branched-chain amino acid transport system / permease component DW349_RS13710 PF02653 Branched-chain amino acid transport system / permease component DW349_RS13715 PF00005 ABC transporter DW349_RS13720 PF13407 Periplasmic binding protein domain DW349_RS13725 PF00455 DeoR C terminal sensor domain DW349_RS13725 PF08220 DeoR-like helix-turn-helix domain DW349_RS13730 PF00596 Class II Aldolase and Adducin N-terminal domain DW349_RS13735 PF01261 Xylose isomerase-like TIM barrel DW349_RS13740 PF01070 FMN-dependent dehydrogenase DW349_RS13785 PF00534 Glycosyl transferases group 1 DW349_RS13785 PF13439 Glycosyltransferase Family 4 DW349_RS13790 PF00925 GTP cyclohydrolase II DW349_RS13790 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase DW349_RS13795 PF01872 RibD C-terminal domain DW349_RS13795 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region DW349_RS13815 PF01066 CDP-alcohol phosphatidyltransferase DW349_RS13820 PF04349 Periplasmic glucan biosynthesis protein, MdoG DW349_RS13825 PF13632 Glycosyl transferase family group 2 DW349_RS13855 PF18381 YcaO cyclodehydratase C-terminal domain DW349_RS13855 PF02624 YcaO cyclodehydratase, ATP-ad Mg2+-binding DW349_RS13860 PF00391 PEP-utilising enzyme, mobile domain DW349_RS13860 PF05524 PEP-utilising enzyme, N-terminal DW349_RS13860 PF02896 PEP-utilising enzyme, TIM barrel domain DW349_RS13860 PF01590 GAF domain DW349_RS13870 PF04608 Phosphatidylglycerophosphatase A DW349_RS13875 PF00586 AIR synthase related protein, N-terminal domain DW349_RS13875 PF02769 AIR synthase related protein, C-terminal domain DW349_RS13880 PF01293 Phosphoenolpyruvate carboxykinase DW349_RS13890 PF00206 Lyase DW349_RS13890 PF14698 Argininosuccinate lyase C-terminal DW349_RS13895 PF00563 EAL domain DW349_RS13895 PF03707 Bacterial signalling protein N terminal repeat DW349_RS13895 PF00990 Diguanylate cyclase, GGDEF domain DW349_RS13900 PF00005 ABC transporter DW349_RS13900 PF17912 MalK OB fold domain DW349_RS13900 PF03459 TOBE domain DW349_RS13905 PF00528 Binding-protein-dependent transport system inner membrane component DW349_RS13910 PF00528 Binding-protein-dependent transport system inner membrane component DW349_RS13915 PF01547 Bacterial extracellular solute-binding protein DW349_RS13920 PF13185 GAF domain DW349_RS13940 PF03900 Porphobilinogen deaminase, C-terminal domain DW349_RS13940 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain DW349_RS13945 PF03358 NADPH-dependent FMN reductase DW349_RS13950 PF03466 LysR substrate binding domain DW349_RS13950 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DW349_RS13960 PF03989 DNA gyrase C-terminal domain, beta-propeller DW349_RS13960 PF00521 DNA gyrase/topoisomerase IV, subunit A DW349_RS13970 PF12804 MobA-like NTP transferase domain DW349_RS13980 PF02634 FdhD/NarQ family DW349_RS13985 PF01568 Molydopterin dinucleotide binding domain DW349_RS13985 PF04879 Molybdopterin oxidoreductase Fe4S4 domain DW349_RS13985 PF00037 4Fe-4S binding domain DW349_RS13985 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region DW349_RS13985 PF00384 Molybdopterin oxidoreductase DW349_RS13990 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit DW349_RS13990 PF00037 4Fe-4S binding domain DW349_RS13990 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region DW349_RS14000 PF00561 alpha/beta hydrolase fold DW349_RS14010 PF00766 Electron transfer flavoprotein FAD-binding domain DW349_RS14010 PF01012 Electron transfer flavoprotein domain DW349_RS14015 PF13183 4Fe-4S dicluster domain DW349_RS14015 PF02754 Cysteine-rich domain DW349_RS14020 PF00724 NADH:flavin oxidoreductase / NADH oxidase family DW349_RS14030 PF03466 LysR substrate binding domain DW349_RS14030 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DW349_RS14050 PF01244 Membrane dipeptidase (Peptidase family M19) DW349_RS14055 PF01965 DJ-1/PfpI family DW349_RS14055 PF12833 Helix-turn-helix domain DW349_RS14060 PF00175 Oxidoreductase NAD-binding domain DW349_RS14060 PF00042 Globin DW349_RS14060 PF00970 Oxidoreductase FAD-binding domain DW349_RS14065 PF00848 Ring hydroxylating alpha subunit (catalytic domain) DW349_RS14065 PF00355 Rieske [2Fe-2S] domain DW349_RS14070 PF00464 Serine hydroxymethyltransferase DW349_RS14075 PF03315 Serine dehydratase beta chain DW349_RS14075 PF03313 Serine dehydratase alpha chain DW349_RS14080 PF01266 FAD dependent oxidoreductase DW349_RS14090 PF01571 Aminomethyltransferase folate-binding domain DW349_RS14090 PF08669 Glycine cleavage T-protein C-terminal barrel domain DW349_RS14090 PF07992 Pyridine nucleotide-disulphide oxidoreductase DW349_RS14090 PF17806 Sarcosine oxidase A3 domain DW349_RS14100 PF00551 Formyl transferase DW349_RS14110 PF01208 Uroporphyrinogen decarboxylase (URO-D) DW349_RS14120 PF07992 Pyridine nucleotide-disulphide oxidoreductase DW349_RS14120 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster DW349_RS14125 PF00310 Glutamine amidotransferases class-II DW349_RS14125 PF01645 Conserved region in glutamate synthase DW349_RS14125 PF01493 GXGXG motif DW349_RS14125 PF04898 Glutamate synthase central domain DW349_RS14135 PF01761 3-dehydroquinate synthase DW349_RS14140 PF01202 Shikimate kinase DW349_RS14145 PF07660 Secretin and TonB N terminus short domain DW349_RS14145 PF03958 Bacterial type II/III secretion system short domain DW349_RS14145 PF00263 Bacterial type II and III secretion system protein DW349_RS14145 PF11741 AMIN domain DW349_RS14150 PF04351 Pilus assembly protein, PilP DW349_RS14165 PF11104 Type IV pilus assembly protein PilM; DW349_RS14170 PF17092 Penicillin-binding protein OB-like domain DW349_RS14170 PF00912 Transglycosylase DW349_RS14170 PF00905 Penicillin binding protein transpeptidase domain DW349_RS14175 PF03949 Malic enzyme, NAD binding domain DW349_RS14175 PF00390 Malic enzyme, N-terminal domain DW349_RS14180 PF01197 Ribosomal protein L31 DW349_RS14185 PF00270 DEAD/DEAH box helicase DW349_RS14185 PF00271 Helicase conserved C-terminal domain DW349_RS14185 PF17764 3′ DNA-binding domain (3′BD) DW349_RS14185 PF18074 Primosomal protein N C-terminal domain DW349_RS14185 PF18319 PriA DNA helicase Cys-rich region (CRR) domain DW349_RS14190 PF05746 DALR anticodon binding domain DW349_RS14190 PF03485 Arginyl tRNA synthetase N terminal domain DW349_RS14190 PF00750 tRNA synthetases class I (R) DW349_RS14200 PF00227 Proteasome subunit DW349_RS14205 PF10431 C-terminal, D2-small domain, of ClpB protein DW349_RS14205 PF07724 AAA domain (Cdc48 subfamily) DW349_RS14205 PF00004 ATPase family associated with various cellular activities (AAA) DW349_RS14215 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase DW349_RS14220 PF10688 Bacterial inner membrane protein DW349_RS14225 PF00111 2Fe-2S iron-sulfur cluster binding domain DW349_RS14225 PF00175 Oxidoreductase NAD-binding domain DW349_RS14225 PF00970 Oxidoreductase FAD-binding domain DW349_RS14235 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DW349_RS14235 PF12729 Four helix bundle sensory module for signal transduction DW349_RS14235 PF00672 HAMP domain DW349_RS14240 PF04069 Substrate binding domain of ABC-type glycine betaine transport system DW349_RS14245 PF00884 Sulfatase DW349_RS14245 PF12411 Choline sulfatase enzyme C terminal DW349_RS14250 PF03466 LysR substrate binding domain DW349_RS14250 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DW349_RS14255 PF12833 Helix-turn-helix domain DW349_RS14265 PF00270 DEAD/DEAH box helicase DW349_RS14265 PF00271 Helicase conserved C-terminal domain DW349_RS14270 PF11954 Domain of unknown function (DUF3471) DW349_RS14270 PF00144 Beta-lactamase DW349_RS14275 PF00202 Aminotransferase class-III DW349_RS14280 PF04958 Arginine N-succinyltransferase beta subunit DW349_RS14285 PF04958 Arginine N-succinyltransferase beta subunit DW349_RS14290 PF00171 Aldehyde dehydrogenase family DW349_RS14295 PF04996 Succinylarginine dihydrolase DW349_RS14320 PF03466 LysR substrate binding domain DW349_RS14320 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DW349_RS14335 PF00528 Binding-protein-dependent transport system inner membrane component DW349_RS14340 PF00528 Binding-protein-dependent transport system inner membrane component DW349_RS14350 PF00356 Bacterial regulatory proteins, lacI family DW349_RS14355 PF07724 AAA domain (Cdc48 subfamily) DW349_RS14355 PF17871 AAA lid domain DW349_RS14355 PF00004 ATPase family associated with various cellular activities (AAA) DW349_RS14355 PF02861 Clp amino terminal domain, pathogenicity island component DW349_RS14355 PF10431 C-terminal, D2-small domain, of ClpB protein DW349_RS14360 PF02578 Multi-copper polyphenol oxidoreductase laccase DW349_RS14365 PF00849 RNA pseudouridylate synthase DW349_RS14365 PF01479 S4 domain DW349_RS14370 PF13525 Outer membrane lipoprotein DW349_RS14375 PF13419 Haloacid dehalogenase-like hydrolase DW349_RS14380 PF00795 Carbon-nitrogen hydrolase DW349_RS14380 PF02540 NAD synthase DW349_RS14385 PF07963 Prokaryotic N-terminal methylation motif DW349_RS14385 PF16732 Type IV minor pilin ComP, DNA uptake sequence receptor DW349_RS14405 PF07963 Prokaryotic N-terminal methylation motif DW349_RS14405 PF00114 Pilin (bacterial filament) DW349_RS14410 PF02401 LytB protein DW349_RS14415 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase DW349_RS14420 PF01252 Signal peptidase (SPase) II DW349_RS14425 PF00133 tRNA synthetases class I (I, L, M and V) DW349_RS14425 PF06827 Zinc finger found in FPG and IleRS DW349_RS14425 PF08264 Anticodon-binding domain of tRNA DW349_RS14430 PF01687 Riboflavin kinase DW349_RS14430 PF06574 FAD synthetase DW349_RS14435 PF03023 Lipid II flippase MurJ DW349_RS14440 PF01649 Ribosomal protein S20 DW349_RS14445 PF02678 Pirin DW349_RS14445 PF05726 Pirin C-terminal cupin domain DW349_RS14450 PF03466 LysR substrate binding domain DW349_RS14450 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DW349_RS14460 PF01113 Dihydrodipicolinate reductase, N-terminus DW349_RS14460 PF05173 Dihydrodipicolinate reductase, C-terminus DW349_RS14465 PF00226 DnaJ domain DW349_RS14465 PF00684 DnaJ central domain DW349_RS14465 PF01556 DnaJ C terminal domain DW349_RS14470 PF00012 Hsp70 protein DW349_RS14475 PF01025 GrpE DW349_RS14480 PF02463 RecF/RecN/SMC N terminal domain DW349_RS14485 PF01475 Ferric uptake regulator family DW349_RS14490 PF04355 SmpA / OmlA family DW349_RS14495 PF03658 RnfH family Ubiquitin DW349_RS14500 PF03364 Polyketide cyclase / dehydrase and lipid transport DW349_RS14510 PF07995 Glucose / Sorbosone dehydrogenase DW349_RS14540 PF02146 Sir2 family DW349_RS14545 PF01645 Conserved region in glutamate synthase DW349_RS14555 PF01699 Sodium/calcium exchanger protein DW349_RS14560 PF07690 Major Facilitator Superfamily DW349_RS14570 PF03793 PASTA domain DW349_RS14570 PF00069 Protein kinase domain DW349_RS14580 PF00211 Adenylate and Guanylate cyclase catalytic domain DW349_RS14620 PF01292 Prokaryotic cytochrome b561 DW349_RS14625 PF00174 Oxidoreductase molybdopterin binding domain DW349_RS14640 PF00440 Bacterial regulatory proteins, tetR family DW349_RS14695 PF04002 RadC-like JAB domain DW349_RS14730 PF01668 SmpB protein DW349_RS14735 PF03788 LrgA family DW349_RS14745 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family DW349_RS14750 PF00528 Binding-protein-dependent transport system inner membrane component DW349_RS14755 PF00528 Binding-protein-dependent transport system inner membrane component DW349_RS14760 PF00497 Bacterial extracellular solute-binding proteins, family 3 DW349_RS14765 PF00005 ABC transporter DW349_RS14770 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle DW349_RS14775 PF00528 Binding-protein-dependent transport system inner membrane component DW349_RS14780 PF12911 N-terminal TM domain of oligopeptide transport permease C DW349_RS14780 PF00528 Binding-protein-dependent transport system inner membrane component DW349_RS14785 PF08352 Oligopeptide/dipeptide transporter, C-terminal region DW349_RS14785 PF00005 ABC transporter DW349_RS14790 PF08352 Oligopeptide/dipeptide transporter, C-terminal region DW349_RS14790 PF00005 ABC transporter DW349_RS14800 PF14814 Bifunctional transglycosylase second domain DW349_RS14800 PF00905 Penicillin binding protein transpeptidase domain DW349_RS14800 PF00912 Transglycosylase DW349_RS14805 PF01061 ABC-2 type transporter DW349_RS14810 PF00005 ABC transporter DW349_RS14820 PF03275 UDP-galactopyranose mutase DW349_RS14835 PF03104 DNA polymerase family B, exonuclease domain DW349_RS14835 PF00136 DNA polymerase family B DW349_RS14840 PF02696 Uncharacterized ACR, YdiU/UPF0061 family DW349_RS14845 PF02743 Cache domain DW349_RS14845 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DW349_RS14845 PF00672 HAMP domain DW349_RS14850 PF02770 Acyl-CoA dehydrogenase, middle domain DW349_RS14850 PF02771 Acyl-CoA dehydrogenase, N-terminal domain DW349_RS14850 PF12806 Acetyl-CoA dehydrogenase C-terminal like DW349_RS14850 PF00441 Acyl-CoA dehydrogenase, C-terminal domain DW349_RS14855 PF00441 Acyl-CoA dehydrogenase, C-terminal domain DW349_RS14855 PF02770 Acyl-CoA dehydrogenase, middle domain DW349_RS14855 PF02771 Acyl-CoA dehydrogenase, N-terminal domain DW349_RS14855 PF12806 Acetyl-CoA dehydrogenase C-terminal like DW349_RS14860 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain DW349_RS14865 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase DW349_RS14870 PF01979 Amidohydrolase family DW349_RS14875 PF07702 UTRA domain DW349_RS14875 PF00392 Bacterial regulatory proteins, gntR family DW349_RS14880 PF01869 BadF/BadG/BcrA/BcrD ATPase family DW349_RS14885 PF02838 Glycosyl hydrolase family 20, domain 2 DW349_RS14885 PF00728 Glycosyl hydrolase family 20, catalytic domain DW349_RS14895 PF00528 Binding-protein-dependent transport system inner membrane component DW349_RS14900 PF00528 Binding-protein-dependent transport system inner membrane component DW349_RS14910 PF00583 Acetyltransferase (GNAT) family DW349_RS14915 PF00356 Bacterial regulatory proteins, lacI family DW349_RS14920 PF00722 Glycosyl hydrolases family 16 DW349_RS14925 PF00005 ABC transporter DW349_RS14925 PF08352 Oligopeptide/dipeptide transporter, C-terminal region DW349_RS14930 PF00005 ABC transporter DW349_RS14930 PF08352 Oligopeptide/dipeptide transporter, C-terminal region DW349_RS14935 PF12911 N-terminal TM domain of oligopeptide transport permease C DW349_RS14935 PF00528 Binding-protein-dependent transport system inner membrane component DW349_RS14940 PF00528 Binding-protein-dependent transport system inner membrane component DW349_RS14945 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle DW349_RS14975 PF03737 Aldolase/RraA DW349_RS14980 PF13302 Acetyltransferase (GNAT) domain DW349_RS14985 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded DW349_RS14990 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region DW349_RS14995 PF01048 Phosphorylase superfamily DW349_RS15000 PF00512 His Kinase A (phospho-acceptor) domain DW349_RS15000 PF00672 HAMP domain DW349_RS15000 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DW349_RS15005 PF00486 Transcriptional regulatory protein, C terminal DW349_RS15005 PF00072 Response regulator receiver domain DW349_RS15010 PF12633 Adenylate cyclase NT domain DW349_RS15010 PF01295 Adenylate cyclase, class-I DW349_RS15020 PF00072 Response regulator receiver domain DW349_RS15020 PF01627 Hpt domain DW349_RS15020 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DW349_RS15020 PF02895 Signal transducing histidine kinase, homodimeric domain DW349_RS15020 PF01584 CheW-like domain DW349_RS15040 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DW349_RS15040 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term DW349_RS15045 PF01584 CheW-like domain DW349_RS15050 PF00072 Response regulator receiver domain DW349_RS15055 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain DW349_RS15055 PF02951 Prokaryotic glutathione synthetase, N-terminal domain DW349_RS15065 PF03652 Holliday junction resolvase DW349_RS15075 PF18081 Fanconi anemia-associated nuclease SAP domain DW349_RS15075 PF08774 VRR-NUC domain DW349_RS15080 PF13307 Helicase C-terminal domain DW349_RS15080 PF13307 Helicase C-terminal domain DW349_RS15085 PF05230 MASE2 domain DW349_RS15085 PF00990 Diguanylate cyclase, GGDEF domain DW349_RS15095 PF00072 Response regulator receiver domain DW349_RS15095 PF08279 HTH domain DW349_RS15115 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component DW349_RS15120 PF01968 Hydantoinase/oxoprolinase DW349_RS15120 PF05378 Hydantoinase/oxoprolinase N-terminal region DW349_RS15130 PF01612 3'-5' exonuclease DW349_RS15130 PF00476 DNA polymerase family A DW349_RS15130 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain DW349_RS15130 PF01367 5'-3' exonuclease, C-terminal SAM fold DW349_RS15135 PF01636 Phosphotransferase enzyme family DW349_RS15140 PF14793 Pyrimidine/purine nucleotide 5'-monophosphate nucleosidases DW349_RS15140 PF11892 Domain of unknown function (DUF3412) DW349_RS15140 PF03641 Possible lysine decarboxylase DW349_RS15145 PF00990 Diguanylate cyclase, GGDEF domain DW349_RS15145 PF17158 Membrane-associated sensor, integral membrane domain DW349_RS15165 PF03466 LysR substrate binding domain DW349_RS15165 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DW349_RS15170 PF17191 RecG wedge domain DW349_RS15170 PF00271 Helicase conserved C-terminal domain DW349_RS15170 PF00270 DEAD/DEAH box helicase DW349_RS15180 PF01546 Peptidase family M20/M25/M40 DW349_RS15180 PF07687 Peptidase dimerisation domain DW349_RS15195 PF03880 DbpA RNA binding domain DW349_RS15195 PF00270 DEAD/DEAH box helicase DW349_RS15195 PF00271 Helicase conserved C-terminal domain DW349_RS15205 PF00218 Indole-3-glycerol phosphate synthase DW349_RS15210 PF00591 Glycosyl transferase family, a/b domain DW349_RS15210 PF02885 Glycosyl transferase family, helical bundle domain DW349_RS15215 PF00117 Glutamine amidotransferase class-I DW349_RS15220 PF01627 Hpt domain DW349_RS15220 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DW349_RS15220 PF18415 Histidine kinase receptor ArcB trans-membrane domain DW349_RS15220 PF00072 Response regulator receiver domain DW349_RS15220 PF00989 PAS fold DW349_RS15220 PF00512 His Kinase A (phospho-acceptor) domain DW349_RS15225 PF00486 Transcriptional regulatory protein, C terminal DW349_RS15225 PF00072 Response regulator receiver domain DW349_RS15240 PF03466 LysR substrate binding domain DW349_RS15240 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DW349_RS15245 PF02525 Flavodoxin-like fold DW349_RS15260 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DW349_RS15260 PF00072 Response regulator receiver domain DW349_RS15260 PF00512 His Kinase A (phospho-acceptor) domain DW349_RS15260 PF09456 RcsC Alpha-Beta-Loop (ABL) DW349_RS15265 PF00072 Response regulator receiver domain DW349_RS15265 PF00196 Bacterial regulatory proteins, luxR family DW349_RS15300 PF05643 Putative bacterial lipoprotein (DUF799) DW349_RS15315 PF02653 Branched-chain amino acid transport system / permease component DW349_RS15325 PF00005 ABC transporter DW349_RS15325 PF12399 Branched-chain amino acid ATP-binding cassette transporter DW349_RS15330 PF00005 ABC transporter DW349_RS15335 PF01774 UreD urease accessory protein DW349_RS15340 PF00547 Urease, gamma subunit DW349_RS15345 PF00699 Urease beta subunit DW349_RS15350 PF01979 Amidohydrolase family DW349_RS15350 PF00449 Urease alpha-subunit, N-terminal domain DW349_RS15355 PF05194 UreE urease accessory protein, C-terminal domain DW349_RS15355 PF02814 UreE urease accessory protein, N-terminal domain DW349_RS15360 PF01730 UreF DW349_RS15365 PF02492 CobW/HypB/UreG, nucleotide-binding domain DW349_RS15370 PF04955 HupE / UreJ protein DW349_RS15395 PF00724 NADH:flavin oxidoreductase / NADH oxidase family DW349_RS15400 PF05985 Ethanolamine ammonia-lyase light chain (EutC) DW349_RS15405 PF06751 Ethanolamine ammonia lyase large subunit (EutB) DW349_RS15410 PF00909 Ammonium Transporter Family DW349_RS15415 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus DW349_RS15415 PF04039 Domain related to MnhB subunit of Na+/H+ antiporter DW349_RS15415 PF13244 Domain of unknown function (DUF4040) DW349_RS15415 PF00361 Proton-conducting membrane transporter DW349_RS15420 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L DW349_RS15425 PF00361 Proton-conducting membrane transporter DW349_RS15430 PF01899 Na+/H+ ion antiporter subunit DW349_RS15435 PF04066 Multiple resistance and pH regulation protein F (MrpF / PhaF) DW349_RS15440 PF03334 Na+/H+ antiporter subunit DW349_RS15450 PF08274 PhnA Zinc-Ribbon DW349_RS15450 PF03831 PhnA domain DW349_RS15455 PF07690 Major Facilitator Superfamily DW349_RS15460 PF13533 Biotin-lipoyl like DW349_RS15470 PF00857 Isochorismatase family DW349_RS15475 PF02653 Branched-chain amino acid transport system / permease component DW349_RS15485 PF00005 ABC transporter DW349_RS15535 PF01121 Dephospho-CoA kinase DW349_RS15535 PF04229 GrpB protein DW349_RS15540 PF01810 LysE type translocator DW349_RS15550 PF00107 Zinc-binding dehydrogenase DW349_RS15550 PF08240 Alcohol dehydrogenase GroES-like domain DW349_RS15555 PF02653 Branched-chain amino acid transport system / permease component DW349_RS15560 PF00005 ABC transporter DW349_RS15565 PF13407 Periplasmic binding protein domain DW349_RS15570 PF00356 Bacterial regulatory proteins, lacI family DW349_RS15575 PF00296 Luciferase-like monooxygenase DW349_RS15580 PF13193 AMP-binding enzyme C-terminal domain DW349_RS15580 PF00501 AMP-binding enzyme DW349_RS15585 PF02803 Thiolase, C-terminal domain DW349_RS15585 PF00108 Thiolase, N-terminal domain DW349_RS15590 PF00881 Nitroreductase family DW349_RS15610 PF01738 Dienelactone hydrolase family DW349_RS15635 PF00425 chorismate binding enzyme DW349_RS15635 PF04715 Anthranilate synthase component I, N terminal region DW349_RS15640 PF00117 Glutamine amidotransferase class-I DW349_RS15660 PF04227 Indigoidine synthase A like protein DW349_RS15665 PF00294 pfkB family carbohydrate kinase DW349_RS15675 PF00563 EAL domain DW349_RS15675 PF00990 Diguanylate cyclase, GGDEF domain DW349_RS15675 PF03707 Bacterial signalling protein N terminal repeat DW349_RS15680 PF12848 ABC transporter DW349_RS15680 PF00005 ABC transporter DW349_RS15685 PF00464 Serine hydroxymethyltransferase DW349_RS15690 PF00892 EamA-like transporter family DW349_RS15695 PF00107 Zinc-binding dehydrogenase DW349_RS15695 PF08240 Alcohol dehydrogenase GroES-like domain DW349_RS15700 PF03466 LysR substrate binding domain DW349_RS15700 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DW349_RS15705 PF03315 Serine dehydratase beta chain DW349_RS15705 PF03313 Serine dehydratase alpha chain DW349_RS15710 PF00034 Cytochrome c DW349_RS15715 PF03477 ATP cone domain DW349_RS15720 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region DW349_RS15720 PF01872 RibD C-terminal domain DW349_RS15725 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase DW349_RS15725 PF00925 GTP cyclohydrolase II DW349_RS15730 PF00885 6,7-dimethyl-8-ribityllumazine synthase DW349_RS15735 PF01029 NusB family DW349_RS15780 PF00459 Inositol monophosphatase family DW349_RS15785 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain DW349_RS15785 PF00117 Glutamine amidotransferase class-I DW349_RS15790 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain DW349_RS15790 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain DW349_RS15790 PF02142 MGS-like domain DW349_RS15795 PF03449 Transcription elongation factor, N-terminal DW349_RS15795 PF01272 Transcription elongation factor, GreA/GreB, C-term DW349_RS15805 PF01145 SPFH domain / Band 7 family DW349_RS15810 PF01966 HD domain DW349_RS15815 PF18073 Rubredoxin metal binding domain DW349_RS15845 PF00005 ABC transporter DW349_RS15845 PF00664 ABC transporter transmembrane region DW349_RS15850 PF00005 ABC transporter DW349_RS15850 PF00664 ABC transporter transmembrane region DW349_RS15860 PF01654 Cytochrome bd terminal oxidase subunit I DW349_RS15865 PF02322 Cytochrome bd terminal oxidase subunit II DW349_RS15870 PF01966 HD domain DW349_RS15880 PF00834 Ribulose-phosphate 3 epimerase family DW349_RS15890 PF13419 Haloacid dehalogenase-like hydrolase DW349_RS15895 PF00270 DEAD/DEAH box helicase DW349_RS15895 PF00271 Helicase conserved C-terminal domain DW349_RS15900 PF00892 EamA-like transporter family DW349_RS15905 PF01047 MarR family DW349_RS15915 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DW349_RS15915 PF03466 LysR substrate binding domain DW349_RS15920 PF01144 Coenzyme A transferase DW349_RS15925 PF01144 Coenzyme A transferase DW349_RS15930 PF02803 Thiolase, C-terminal domain DW349_RS15930 PF00108 Thiolase, N-terminal domain DW349_RS15935 PF02667 Short chain fatty acid transporter DW349_RS15940 PF00881 Nitroreductase family DW349_RS15980 PF00583 Acetyltransferase (GNAT) family DW349_RS15980 PF00795 Carbon-nitrogen hydrolase DW349_RS15995 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion DW349_RS16000 PF00873 AcrB/AcrD/AcrF family DW349_RS16010 PF00360 Phytochrome region DW349_RS16010 PF01590 GAF domain DW349_RS16010 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DW349_RS16010 PF00512 His Kinase A (phospho-acceptor) domain DW349_RS16010 PF08446 PAS fold DW349_RS16015 PF00072 Response regulator receiver domain DW349_RS16020 PF03707 Bacterial signalling protein N terminal repeat DW349_RS16020 PF00563 EAL domain DW349_RS16020 PF00990 Diguanylate cyclase, GGDEF domain DW349_RS16040 PF18317 Shikimate 5'-dehydrogenase C-terminal domain DW349_RS16040 PF08501 Shikimate dehydrogenase substrate binding domain DW349_RS16045 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily DW349_RS16045 PF01261 Xylose isomerase-like TIM barrel DW349_RS16055 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component DW349_RS16065 PF03480 Bacterial extracellular solute-binding protein, family 7 DW349_RS16075 PF13286 Phosphohydrolase-associated domain DW349_RS16075 PF01966 HD domain DW349_RS16080 PF12848 ABC transporter DW349_RS16080 PF00005 ABC transporter DW349_RS16085 PF12848 ABC transporter DW349_RS16085 PF00005 ABC transporter DW349_RS16090 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DW349_RS16090 PF03466 LysR substrate binding domain DW349_RS16095 PF03480 Bacterial extracellular solute-binding protein, family 7 DW349_RS16105 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component DW349_RS16110 PF03737 Aldolase/RraA DW349_RS16115 PF04303 PrpF protein DW349_RS16120 PF04909 Amidohydrolase DW349_RS16130 PF01408 Oxidoreductase family, NAD-binding Rossmann fold DW349_RS16135 PF03707 Bacterial signalling protein N terminal repeat DW349_RS16135 PF00563 EAL domain DW349_RS16135 PF00990 Diguanylate cyclase, GGDEF domain DW349_RS16155 PF00672 HAMP domain DW349_RS16155 PF07228 Stage II sporulation protein E (SpoIIE) DW349_RS16180 PF13419 Haloacid dehalogenase-like hydrolase DW349_RS16185 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DW349_RS16185 PF03466 LysR substrate binding domain DW349_RS16190 PF07746 Aromatic-ring-opening dioxygenase LigAB, LigA subunit DW349_RS16195 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase DW349_RS16200 PF04909 Amidohydrolase DW349_RS16205 PF01557 Fumarylacetoacetate (FAA) hydrolase family DW349_RS16215 PF00248 Aldo/keto reductase family DW349_RS16220 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DW349_RS16220 PF03466 LysR substrate binding domain DW349_RS16225 PF01494 FAD binding domain DW349_RS16230 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DW349_RS16240 PF02646 RmuC family DW349_RS16255 PF02080 TrkA-C domain DW349_RS16255 PF03471 Transporter associated domain DW349_RS16255 PF00999 Sodium/hydrogen exchanger family DW349_RS16260 PF00563 EAL domain DW349_RS16260 PF00990 Diguanylate cyclase, GGDEF domain DW349_RS16260 PF03707 Bacterial signalling protein N terminal repeat DW349_RS16265 PF04116 Fatty acid hydroxylase superfamily DW349_RS16285 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DW349_RS16290 PF00128 Alpha amylase, catalytic domain DW349_RS16295 PF01547 Bacterial extracellular solute-binding protein DW349_RS16300 PF00528 Binding-protein-dependent transport system inner membrane component DW349_RS16305 PF00528 Binding-protein-dependent transport system inner membrane component DW349_RS16310 PF00128 Alpha amylase, catalytic domain DW349_RS16315 PF00356 Bacterial regulatory proteins, lacI family DW349_RS16320 PF00583 Acetyltransferase (GNAT) family DW349_RS16330 PF00106 short chain dehydrogenase DW349_RS16340 PF00392 Bacterial regulatory proteins, gntR family DW349_RS16340 PF00155 Aminotransferase class I and II DW349_RS16345 PF01329 Pterin 4 alpha carbinolamine dehydratase DW349_RS16365 PF01061 ABC-2 type transporter DW349_RS16370 PF00005 ABC transporter DW349_RS16380 PF00578 AhpC/TSA family DW349_RS16385 PF07690 Major Facilitator Superfamily DW349_RS16395 PF07690 Major Facilitator Superfamily DW349_RS16400 PF00248 Aldo/keto reductase family DW349_RS16405 PF03601 Conserved hypothetical protein 698 DW349_RS16410 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DW349_RS16410 PF03466 LysR substrate binding domain DW349_RS16415 PF02678 Pirin DW349_RS16415 PF05726 Pirin C-terminal cupin domain DW349_RS16420 PF00582 Universal stress protein family DW349_RS16435 PF16363 GDP-mannose 4,6 dehydratase DW349_RS16445 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DW349_RS16445 PF00672 HAMP domain DW349_RS16445 PF02743 Cache domain DW349_RS16450 PF18030 RimK PreATP-grasp domain DW349_RS16450 PF08443 RimK-like ATP-grasp domain DW349_RS16455 PF01694 Rhomboid family DW349_RS16465 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain DW349_RS16465 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain DW349_RS16480 PF05114 Protein of unknown function (DUF692) DW349_RS16495 PF12729 Four helix bundle sensory module for signal transduction DW349_RS16495 PF00672 HAMP domain DW349_RS16495 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DW349_RS16500 PF09382 RQC domain DW349_RS16500 PF16124 RecQ zinc-binding DW349_RS16500 PF00271 Helicase conserved C-terminal domain DW349_RS16500 PF00270 DEAD/DEAH box helicase DW349_RS16500 PF00570 HRDC domain DW349_RS16510 PF18158 Adaptive response protein AidB N-terminal domain DW349_RS16510 PF02770 Acyl-CoA dehydrogenase, middle domain DW349_RS16510 PF00441 Acyl-CoA dehydrogenase, C-terminal domain DW349_RS16515 PF03466 LysR substrate binding domain DW349_RS16515 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DW349_RS16520 PF16657 Maltogenic Amylase, C-terminal domain DW349_RS16520 PF00128 Alpha amylase, catalytic domain DW349_RS16525 PF00128 Alpha amylase, catalytic domain DW349_RS16525 PF16657 Maltogenic Amylase, C-terminal domain DW349_RS16530 PF02894 Oxidoreductase family, C-terminal alpha/beta domain DW349_RS16530 PF01408 Oxidoreductase family, NAD-binding Rossmann fold DW349_RS16540 PF04024 PspC domain DW349_RS16545 PF06667 Phage shock protein B DW349_RS16550 PF04012 PspA/IM30 family DW349_RS16560 PF02954 Bacterial regulatory protein, Fis family DW349_RS16560 PF00158 Sigma-54 interaction domain DW349_RS16570 PF00543 Nitrogen regulatory protein P-II DW349_RS16575 PF00909 Ammonium Transporter Family DW349_RS16580 PF00543 Nitrogen regulatory protein P-II DW349_RS16585 PF04380 Membrane fusogenic activity DW349_RS16595 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family DW349_RS16600 PF01638 HxlR-like helix-turn-helix DW349_RS16605 PF00109 Beta-ketoacyl synthase, N-terminal domain DW349_RS16605 PF02801 Beta-ketoacyl synthase, C-terminal domain DW349_RS16615 PF02653 Branched-chain amino acid transport system / permease component DW349_RS16620 PF02653 Branched-chain amino acid transport system / permease component DW349_RS16625 PF00005 ABC transporter DW349_RS16630 PF02608 ABC transporter substrate-binding protein PnrA-like DW349_RS16635 PF02780 Transketolase, C-terminal domain DW349_RS16635 PF00456 Transketolase, thiamine diphosphate binding domain DW349_RS16635 PF02779 Transketolase, pyrimidine binding domain DW349_RS16645 PF00438 S-adenosylmethionine synthetase, N-terminal domain DW349_RS16645 PF02772 S-adenosylmethionine synthetase, central domain DW349_RS16645 PF02773 S-adenosylmethionine synthetase, C-terminal domain DW349_RS16650 PF05221 S-adenosyl-L-homocysteine hydrolase DW349_RS16650 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain DW349_RS16655 PF02219 Methylenetetrahydrofolate reductase DW349_RS16660 PF01118 Semialdehyde dehydrogenase, NAD binding domain DW349_RS16665 PF04452 RNA methyltransferase DW349_RS16670 PF05145 Transition state regulatory protein AbrB DW349_RS16675 PF01026 TatD related DNase DW349_RS16690 PF07934 8-oxoguanine DNA glycosylase, N-terminal domain DW349_RS16690 PF00730 HhH-GPD superfamily base excision DNA repair protein DW349_RS16695 PF09859 Oxygenase, catalysing oxidative methylation of damaged DNA DW349_RS16705 PF17946 RecC C-terminal domain DW349_RS16730 PF13361 UvrD-like helicase C-terminal domain DW349_RS16730 PF00580 UvrD/REP helicase N-terminal domain DW349_RS16730 PF12705 PD-(D/E)XK nuclease superfamily DW349_RS16735 PF13538 UvrD-like helicase C-terminal domain DW349_RS16775 PF16363 GDP-mannose 4,6 dehydratase DW349_RS16780 PF02311 AraC-like ligand binding domain DW349_RS16780 PF12833 Helix-turn-helix domain DW349_RS16790 PF00850 Histone deacetylase domain DW349_RS16795 PF03061 Thioesterase superfamily DW349_RS16805 PF07992 Pyridine nucleotide-disulphide oxidoreductase DW349_RS16815 PF01380 SIS domain DW349_RS16820 PF00132 Bacterial transferase hexapeptide (six repeats) DW349_RS16820 PF14602 Hexapeptide repeat of succinyl-transferase DW349_RS16820 PF12804 MobA-like NTP transferase domain DW349_RS16825 PF01370 NAD dependent epimerase/dehydratase family DW349_RS16835 PF11944 Protein of unknown function (DUF3461) DW349_RS16845 PF01116 Fructose-bisphosphate aldolase class-II DW349_RS16850 PF00162 Phosphoglycerate kinase DW349_RS16855 PF00485 Phosphoribulokinase / Uridine kinase family DW349_RS16860 PF00528 Binding-protein-dependent transport system inner membrane component DW349_RS16865 PF00528 Binding-protein-dependent transport system inner membrane component DW349_RS16870 PF08402 TOBE domain DW349_RS16870 PF00005 ABC transporter DW349_RS16875 PF13416 Bacterial extracellular solute-binding protein DW349_RS16910 PF02092 Glycyl-tRNA synthetase beta subunit DW349_RS16910 PF05746 DALR anticodon binding domain DW349_RS16915 PF02091 Glycyl-tRNA synthetase alpha subunit DW349_RS16920 PF02386 Cation transport protein DW349_RS16925 PF02080 TrkA-C domain DW349_RS16925 PF02254 TrkA-N domain DW349_RS16930 PF01029 NusB family DW349_RS16930 PF01189 16S rRNA methyltransferase RsmB/F DW349_RS16935 PF00551 Formyl transferase DW349_RS16935 PF02911 Formyl transferase, C-terminal domain DW349_RS16940 PF01327 Polypeptide deformylase DW349_RS16945 PF02481 DNA recombination-mediator protein A DW349_RS16945 PF17782 DprA winged helix domain DW349_RS16950 PF01300 Telomere recombination DW349_RS16955 PF01218 Coproporphyrinogen III oxidase DW349_RS16965 PF00696 Amino acid kinase family DW349_RS16970 PF00440 Bacterial regulatory proteins, tetR family DW349_RS16975 PF00990 Diguanylate cyclase, GGDEF domain DW349_RS16985 PF13840 ACT domain DW349_RS16985 PF00696 Amino acid kinase family DW349_RS16990 PF06339 Ectoine synthase DW349_RS16995 PF00202 Aminotransferase class-III DW349_RS17000 PF00583 Acetyltransferase (GNAT) family DW349_RS17005 PF01047 MarR family DW349_RS17010 PF13302 Acetyltransferase (GNAT) domain DW349_RS17025 PF00990 Diguanylate cyclase, GGDEF domain DW349_RS17030 PF02678 Pirin DW349_RS17030 PF05726 Pirin C-terminal cupin domain DW349_RS17040 PF02600 Disulfide bond formation protein DsbB DW349_RS17045 PF17284 Spermidine synthase tetramerisation domain DW349_RS17050 PF06280 Fn3-like domain DW349_RS17050 PF00746 LPXTG cell wall anchor motif DW349_RS17050 PF02225 PA domain DW349_RS17050 PF00082 Subtilase family DW349_RS17055 PF02824 TGS domain DW349_RS17055 PF13291 ACT domain DW349_RS17055 PF04607 Region found in RelA / SpoT proteins DW349_RS17060 PF01192 RNA polymerase Rpb6 DW349_RS17065 PF01425 Amidase DW349_RS17070 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain DW349_RS17070 PF00364 Biotin-requiring enzyme DW349_RS17070 PF00289 Biotin carboxylase, N-terminal domain DW349_RS17070 PF02785 Biotin carboxylase C-terminal domain DW349_RS17085 PF00005 ABC transporter DW349_RS17085 PF08402 TOBE domain DW349_RS17090 PF00528 Binding-protein-dependent transport system inner membrane component DW349_RS17100 PF00625 Guanylate kinase DW349_RS17105 PF01810 LysE type translocator DW349_RS17115 PF06441 Epoxide hydrolase N terminus DW349_RS17125 PF01226 Formate/nitrite transporter DW349_RS17130 PF03861 ANTAR domain DW349_RS17130 PF08376 Nitrate and nitrite sensing DW349_RS17145 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DW349_RS17145 PF03466 LysR substrate binding domain DW349_RS17150 PF04471 Restriction endonuclease DW349_RS17150 PF14338 Mrr N-terminal domain DW349_RS17160 PF03755 YicC-like family, N-terminal region DW349_RS17160 PF08340 Domain of unknown function (DUF1732) DW349_RS17165 PF03725 3' exoribonuclease family, domain 2 DW349_RS17165 PF01138 3' exoribonuclease family, domain 1 DW349_RS17175 PF01432 Peptidase family M3 DW349_RS17185 PF18317 Shikimate 5'-dehydrogenase C-terminal domain DW349_RS17185 PF08501 Shikimate dehydrogenase substrate binding domain DW349_RS17185 PF01488 Shikimate / quinate 5-dehydrogenase DW349_RS17190 PF00580 UvrD/REP helicase N-terminal domain DW349_RS17190 PF13361 UvrD-like helicase C-terminal domain DW349_RS17195 PF01810 LysE type translocator DW349_RS17200 PF07690 Major Facilitator Superfamily DW349_RS17205 PF00248 Aldo/keto reductase family DW349_RS17210 PF00248 Aldo/keto reductase family DW349_RS17215 PF03466 LysR substrate binding domain DW349_RS17215 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DW349_RS17230 PF01253 Translation initiation factor SUI1 DW349_RS17240 PF01593 Flavin containing amine oxidoreductase DW349_RS17250 PF00925 GTP cyclohydrolase II DW349_RS17255 PF12146 Serine aminopeptidase, S33 DW349_RS17260 PF12631 MnmE helical domain DW349_RS17260 PF01926 50S ribosome-binding GTPase DW349_RS17260 PF10396 GTP-binding protein TrmE N-terminus DW349_RS17265 PF14849 YidC periplasmic domain DW349_RS17265 PF02096 60Kd inner membrane protein DW349_RS17270 PF00825 Ribonuclease P DW349_RS17275 PF00468 Ribosomal protein L34