SRM_RS07520 cf60c2f8c48cabd2a1521fb71d0b6d9d 358 Pfam PF01661 Macro domain 18 133 1.9E-12 T 22-04-2016 IPR002589 Macro domain SRM_RS07520 cf60c2f8c48cabd2a1521fb71d0b6d9d 358 SMART SM00506 1 136 7.4E-13 T 22-04-2016 IPR002589 Macro domain SRM_RS07520 cf60c2f8c48cabd2a1521fb71d0b6d9d 358 Gene3D G3DSA:3.40.220.10 2 127 6.9E-8 T 22-04-2016 SRM_RS07520 cf60c2f8c48cabd2a1521fb71d0b6d9d 358 PANTHER PTHR12521 1 193 1.4E-33 T 22-04-2016 SRM_RS07520 cf60c2f8c48cabd2a1521fb71d0b6d9d 358 SUPERFAMILY SSF52949 1 144 5.55E-36 T 22-04-2016 SRM_RS14980 eb779d473c758946209909ce81cd97c9 769 Pfam PF13899 Thioredoxin-like 647 732 2.1E-21 T 22-04-2016 SRM_RS14980 eb779d473c758946209909ce81cd97c9 769 Gene3D G3DSA:3.40.30.10 647 757 6.0E-17 T 22-04-2016 IPR012336 Thioredoxin-like fold SRM_RS14980 eb779d473c758946209909ce81cd97c9 769 SUPERFAMILY SSF52833 646 757 6.32E-17 T 22-04-2016 IPR012336 Thioredoxin-like fold SRM_RS14980 eb779d473c758946209909ce81cd97c9 769 PANTHER PTHR32234:SF3 24 763 1.4E-177 T 22-04-2016 SRM_RS14980 eb779d473c758946209909ce81cd97c9 769 Pfam PF11412 Disulphide bond corrector protein DsbC 72 192 4.1E-17 T 22-04-2016 IPR028250 Thiol:disulfide interchange protein DsbD, N-terminal domain SRM_RS14980 eb779d473c758946209909ce81cd97c9 769 ProSitePatterns PS00194 Thioredoxin family active site. 667 685 - T 22-04-2016 IPR017937 Thioredoxin, conserved site GO:0045454 SRM_RS14980 eb779d473c758946209909ce81cd97c9 769 PANTHER PTHR32234 24 763 1.4E-177 T 22-04-2016 SRM_RS01140 2094cf03deb498079ed5b69e65f203ba 802 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 780 796 4.3E-8 T 22-04-2016 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 SRM_RS01140 2094cf03deb498079ed5b69e65f203ba 802 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 765 780 4.3E-8 T 22-04-2016 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 SRM_RS01140 2094cf03deb498079ed5b69e65f203ba 802 Gene3D G3DSA:3.30.565.10 305 470 1.0E-14 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SRM_RS01140 2094cf03deb498079ed5b69e65f203ba 802 Pfam PF12833 Helix-turn-helix domain 718 797 3.3E-22 T 22-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 SRM_RS01140 2094cf03deb498079ed5b69e65f203ba 802 Gene3D G3DSA:3.40.50.2300 529 658 7.5E-43 T 22-04-2016 SRM_RS01140 2094cf03deb498079ed5b69e65f203ba 802 SMART SM00448 533 645 4.1E-43 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SRM_RS01140 2094cf03deb498079ed5b69e65f203ba 802 Gene3D G3DSA:1.10.10.60 750 798 2.5E-17 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 SRM_RS01140 2094cf03deb498079ed5b69e65f203ba 802 PANTHER PTHR24423:SF487 226 687 4.8E-82 T 22-04-2016 SRM_RS01140 2094cf03deb498079ed5b69e65f203ba 802 PANTHER PTHR24423:SF487 187 196 4.8E-82 T 22-04-2016 SRM_RS01140 2094cf03deb498079ed5b69e65f203ba 802 SUPERFAMILY SSF52172 527 660 1.57E-40 T 22-04-2016 IPR011006 CheY-like superfamily SRM_RS01140 2094cf03deb498079ed5b69e65f203ba 802 PANTHER PTHR24423 226 687 4.8E-82 T 22-04-2016 SRM_RS01140 2094cf03deb498079ed5b69e65f203ba 802 PANTHER PTHR24423 187 196 4.8E-82 T 22-04-2016 SRM_RS01140 2094cf03deb498079ed5b69e65f203ba 802 Pfam PF00072 Response regulator receiver domain 535 646 7.4E-28 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SRM_RS01140 2094cf03deb498079ed5b69e65f203ba 802 Pfam PF00512 His Kinase A (phospho-acceptor) domain 236 304 7.2E-10 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SRM_RS01140 2094cf03deb498079ed5b69e65f203ba 802 SMART SM00387 350 470 0.0022 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SRM_RS01140 2094cf03deb498079ed5b69e65f203ba 802 SUPERFAMILY SSF55874 293 471 2.13E-13 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SRM_RS01140 2094cf03deb498079ed5b69e65f203ba 802 SMART SM00342 712 796 2.1E-28 T 22-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 SRM_RS01140 2094cf03deb498079ed5b69e65f203ba 802 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 749 792 - T 22-04-2016 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 SRM_RS01140 2094cf03deb498079ed5b69e65f203ba 802 SUPERFAMILY SSF46689 748 798 9.86E-12 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 SRM_RS01140 2094cf03deb498079ed5b69e65f203ba 802 Gene3D G3DSA:1.10.287.130 227 299 1.4E-9 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SRM_RS01140 2094cf03deb498079ed5b69e65f203ba 802 SUPERFAMILY SSF47384 225 305 3.14E-14 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SRM_RS01140 2094cf03deb498079ed5b69e65f203ba 802 Gene3D G3DSA:1.10.10.60 698 749 6.3E-6 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 SRM_RS01140 2094cf03deb498079ed5b69e65f203ba 802 SMART SM00388 236 304 6.3E-8 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SRM_RS06470 4c10b5bedafc78ca5f59caa438a996a0 103 PRINTS PR00971 Ribosomal protein S10 family signature 41 56 4.6E-18 T 22-04-2016 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 SRM_RS06470 4c10b5bedafc78ca5f59caa438a996a0 103 PRINTS PR00971 Ribosomal protein S10 family signature 6 19 4.6E-18 T 22-04-2016 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 SRM_RS06470 4c10b5bedafc78ca5f59caa438a996a0 103 PRINTS PR00971 Ribosomal protein S10 family signature 62 76 4.6E-18 T 22-04-2016 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 SRM_RS06470 4c10b5bedafc78ca5f59caa438a996a0 103 Pfam PF00338 Ribosomal protein S10p/S20e 8 102 7.2E-38 T 22-04-2016 IPR027486 Ribosomal protein S10 domain SRM_RS06470 4c10b5bedafc78ca5f59caa438a996a0 103 Gene3D G3DSA:3.30.70.600 5 103 3.4E-44 T 22-04-2016 IPR027486 Ribosomal protein S10 domain SRM_RS06470 4c10b5bedafc78ca5f59caa438a996a0 103 ProSitePatterns PS00361 Ribosomal protein S10 signature. 30 45 - T 22-04-2016 IPR018268 Ribosomal protein S10, conserved site GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 SRM_RS06470 4c10b5bedafc78ca5f59caa438a996a0 103 TIGRFAM TIGR01049 rpsJ_bact: ribosomal protein uS10 5 103 2.3E-44 T 22-04-2016 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 SRM_RS06470 4c10b5bedafc78ca5f59caa438a996a0 103 Hamap MF_00508 30S ribosomal protein S10 [rpsJ]. 4 103 26.304 T 22-04-2016 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 SRM_RS06470 4c10b5bedafc78ca5f59caa438a996a0 103 SUPERFAMILY SSF54999 7 103 2.88E-38 T 22-04-2016 IPR027486 Ribosomal protein S10 domain SRM_RS06470 4c10b5bedafc78ca5f59caa438a996a0 103 PANTHER PTHR11700 1 103 7.1E-49 T 22-04-2016 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 SRM_RS06470 4c10b5bedafc78ca5f59caa438a996a0 103 SMART SM01403 8 102 4.9E-55 T 22-04-2016 IPR027486 Ribosomal protein S10 domain SRM_RS13350 35a30fb08f4e2e64592e37f02770b43a 1016 SUPERFAMILY SSF52540 661 957 1.89E-44 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SRM_RS13350 35a30fb08f4e2e64592e37f02770b43a 1016 ProSitePatterns PS00211 ABC transporters family signature. 492 506 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 SRM_RS13350 35a30fb08f4e2e64592e37f02770b43a 1016 ProSitePatterns PS00211 ABC transporters family signature. 874 888 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 SRM_RS13350 35a30fb08f4e2e64592e37f02770b43a 1016 Gene3D G3DSA:3.40.50.300 865 986 3.4E-54 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SRM_RS13350 35a30fb08f4e2e64592e37f02770b43a 1016 Gene3D G3DSA:3.40.50.300 483 590 3.5E-50 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SRM_RS13350 35a30fb08f4e2e64592e37f02770b43a 1016 Gene3D G3DSA:3.40.50.300 3 52 3.5E-50 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SRM_RS13350 35a30fb08f4e2e64592e37f02770b43a 1016 Gene3D G3DSA:3.40.50.300 654 736 3.4E-54 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SRM_RS13350 35a30fb08f4e2e64592e37f02770b43a 1016 SUPERFAMILY SSF52540 5 205 1.87E-47 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SRM_RS13350 35a30fb08f4e2e64592e37f02770b43a 1016 SUPERFAMILY SSF52540 436 574 1.87E-47 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SRM_RS13350 35a30fb08f4e2e64592e37f02770b43a 1016 TIGRFAM TIGR00630 uvra: excinuclease ABC subunit A 5 586 2.0E-220 T 22-04-2016 IPR004602 UvrABC system subunit A GO:0006289|GO:0009380|GO:0009381 SRM_RS13350 35a30fb08f4e2e64592e37f02770b43a 1016 PANTHER PTHR32282:SF2 631 997 0.0 T 22-04-2016 SRM_RS13350 35a30fb08f4e2e64592e37f02770b43a 1016 PANTHER PTHR32282:SF2 1 589 0.0 T 22-04-2016 SRM_RS13350 35a30fb08f4e2e64592e37f02770b43a 1016 PANTHER PTHR32282 631 997 0.0 T 22-04-2016 SRM_RS13350 35a30fb08f4e2e64592e37f02770b43a 1016 PANTHER PTHR32282 1 589 0.0 T 22-04-2016 SRM_RS13350 35a30fb08f4e2e64592e37f02770b43a 1016 Gene3D G3DSA:3.30.1490.20 201 241 3.4E-22 T 22-04-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 SRM_RS13350 35a30fb08f4e2e64592e37f02770b43a 1016 Gene3D G3DSA:3.30.1490.20 131 154 3.4E-22 T 22-04-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 SRM_RS13350 35a30fb08f4e2e64592e37f02770b43a 1016 Pfam PF00005 ABC transporter 670 904 2.2E-7 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 SRM_RS13350 35a30fb08f4e2e64592e37f02770b43a 1016 Gene3D G3DSA:1.10.8.280 291 410 2.4E-32 T 22-04-2016 SRM_RS13350 35a30fb08f4e2e64592e37f02770b43a 1016 Gene3D G3DSA:1.20.1580.10 738 864 8.0E-52 T 22-04-2016 SRM_RS13350 35a30fb08f4e2e64592e37f02770b43a 1016 Gene3D G3DSA:1.20.1580.10 93 130 3.5E-47 T 22-04-2016 SRM_RS13350 35a30fb08f4e2e64592e37f02770b43a 1016 Gene3D G3DSA:1.20.1580.10 411 482 3.5E-47 T 22-04-2016 SRM_RS13350 35a30fb08f4e2e64592e37f02770b43a 1016 Gene3D G3DSA:1.20.1580.10 255 288 3.5E-47 T 22-04-2016 SRM_RS03435 c51ca858b14ff08b59d20ef551cdbf6b 262 SUPERFAMILY SSF75217 106 260 4.97E-36 T 22-04-2016 IPR029028 Alpha/beta knot methyltransferases SRM_RS03435 c51ca858b14ff08b59d20ef551cdbf6b 262 Pfam PF08032 RNA 2'-O ribose methyltransferase substrate binding 29 97 5.6E-10 T 22-04-2016 IPR013123 RNA 2-O ribose methyltransferase, substrate binding GO:0008168 SRM_RS03435 c51ca858b14ff08b59d20ef551cdbf6b 262 Gene3D G3DSA:3.30.1330.30 5 98 4.5E-22 T 22-04-2016 IPR029064 50S ribosomal protein L30e-like SRM_RS03435 c51ca858b14ff08b59d20ef551cdbf6b 262 SUPERFAMILY SSF55315 3 98 8.36E-18 T 22-04-2016 IPR029064 50S ribosomal protein L30e-like SRM_RS03435 c51ca858b14ff08b59d20ef551cdbf6b 262 SMART SM00967 29 102 6.1E-12 T 22-04-2016 IPR013123 RNA 2-O ribose methyltransferase, substrate binding GO:0008168 SRM_RS03435 c51ca858b14ff08b59d20ef551cdbf6b 262 Pfam PF00588 SpoU rRNA Methylase family 116 257 7.7E-30 T 22-04-2016 IPR001537 tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008173 SRM_RS03435 c51ca858b14ff08b59d20ef551cdbf6b 262 Gene3D G3DSA:3.40.1280.10 112 259 5.6E-41 T 22-04-2016 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal SRM_RS03435 c51ca858b14ff08b59d20ef551cdbf6b 262 PANTHER PTHR12029 6 260 4.6E-61 T 22-04-2016 SRM_RS12700 266120da2ae7bec999495946dd4a97bf 708 Pfam PF14509 Glycosyl-hydrolase 97 C-terminal, oligomerisation 593 693 1.9E-25 T 22-04-2016 IPR029483 Glycosyl-hydrolase 97, C-terminal oligomerisation domain SRM_RS12700 266120da2ae7bec999495946dd4a97bf 708 PANTHER PTHR35803:SF1 215 698 3.4E-281 T 22-04-2016 SRM_RS12700 266120da2ae7bec999495946dd4a97bf 708 PANTHER PTHR35803:SF1 1 188 3.4E-281 T 22-04-2016 SRM_RS12700 266120da2ae7bec999495946dd4a97bf 708 PANTHER PTHR35803 215 698 3.4E-281 T 22-04-2016 SRM_RS12700 266120da2ae7bec999495946dd4a97bf 708 PANTHER PTHR35803 1 188 3.4E-281 T 22-04-2016 SRM_RS12700 266120da2ae7bec999495946dd4a97bf 708 Pfam PF14508 Glycosyl-hydrolase 97 N-terminal 29 307 8.3E-69 T 22-04-2016 IPR029486 Glycosyl-hydrolase 97, N-terminal domain SRM_RS12700 266120da2ae7bec999495946dd4a97bf 708 Pfam PF10566 Glycoside hydrolase 97 312 591 2.5E-111 T 22-04-2016 IPR019563 Glycosyl-hydrolase 97, catalytic domain SRM_RS14780 fa92cac085ca64d5ea9a5204853d87eb 179 ProSitePatterns PS01321 Crossover junction endodeoxyribonuclease ruvC signature. 113 148 - T 22-04-2016 IPR020563 Crossover junction endodeoxyribonuclease RuvC, magnesium-binding site GO:0008821 SRM_RS14780 fa92cac085ca64d5ea9a5204853d87eb 179 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 83 99 1.5E-28 T 22-04-2016 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 SRM_RS14780 fa92cac085ca64d5ea9a5204853d87eb 179 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 4 17 1.5E-28 T 22-04-2016 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 SRM_RS14780 fa92cac085ca64d5ea9a5204853d87eb 179 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 139 151 1.5E-28 T 22-04-2016 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 SRM_RS14780 fa92cac085ca64d5ea9a5204853d87eb 179 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 61 77 1.5E-28 T 22-04-2016 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 SRM_RS14780 fa92cac085ca64d5ea9a5204853d87eb 179 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 107 126 1.5E-28 T 22-04-2016 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 SRM_RS14780 fa92cac085ca64d5ea9a5204853d87eb 179 PANTHER PTHR30194 1 170 5.6E-54 T 22-04-2016 SRM_RS14780 fa92cac085ca64d5ea9a5204853d87eb 179 Pfam PF02075 Crossover junction endodeoxyribonuclease RuvC 3 151 4.4E-44 T 22-04-2016 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 SRM_RS14780 fa92cac085ca64d5ea9a5204853d87eb 179 Gene3D G3DSA:3.30.420.10 1 154 3.7E-52 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 SRM_RS14780 fa92cac085ca64d5ea9a5204853d87eb 179 TIGRFAM TIGR00228 ruvC: crossover junction endodeoxyribonuclease RuvC 3 154 5.5E-42 T 22-04-2016 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 SRM_RS14780 fa92cac085ca64d5ea9a5204853d87eb 179 SUPERFAMILY SSF53098 1 153 4.05E-43 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 SRM_RS14780 fa92cac085ca64d5ea9a5204853d87eb 179 Hamap MF_00034 Crossover junction endodeoxyribonuclease RuvC [ruvC]. 1 154 44.303 T 22-04-2016 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 SRM_RS00740 efcb07b9adfd3d6c58cf80be433494bd 377 Gene3D G3DSA:3.10.150.10 127 251 1.5E-28 T 22-04-2016 SRM_RS00740 efcb07b9adfd3d6c58cf80be433494bd 377 Gene3D G3DSA:3.10.150.10 1 126 6.4E-24 T 22-04-2016 SRM_RS00740 efcb07b9adfd3d6c58cf80be433494bd 377 Pfam PF02768 DNA polymerase III beta subunit, C-terminal domain 249 371 4.8E-24 T 22-04-2016 IPR022635 DNA polymerase III, beta chain, C-terminal GO:0003677|GO:0003887|GO:0006260|GO:0008408|GO:0009360 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 SRM_RS00740 efcb07b9adfd3d6c58cf80be433494bd 377 PANTHER PTHR30478 2 375 4.1E-101 T 22-04-2016 SRM_RS00740 efcb07b9adfd3d6c58cf80be433494bd 377 SUPERFAMILY SSF55979 1 124 5.89E-22 T 22-04-2016 SRM_RS00740 efcb07b9adfd3d6c58cf80be433494bd 377 SUPERFAMILY SSF55979 129 247 1.29E-19 T 22-04-2016 SRM_RS00740 efcb07b9adfd3d6c58cf80be433494bd 377 Pfam PF02767 DNA polymerase III beta subunit, central domain 137 246 2.5E-21 T 22-04-2016 IPR022637 DNA polymerase III, beta chain, central GO:0003887|GO:0006260|GO:0008408|GO:0009360 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 SRM_RS00740 efcb07b9adfd3d6c58cf80be433494bd 377 SUPERFAMILY SSF55979 249 373 4.71E-30 T 22-04-2016 SRM_RS00740 efcb07b9adfd3d6c58cf80be433494bd 377 PIRSF PIRSF000804 1 374 8.9E-101 T 22-04-2016 IPR001001 DNA polymerase III, beta chain GO:0003677|GO:0003887|GO:0006260|GO:0008408|GO:0009360 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 SRM_RS00740 efcb07b9adfd3d6c58cf80be433494bd 377 SMART SM00480 17 366 1.3E-78 T 22-04-2016 IPR001001 DNA polymerase III, beta chain GO:0003677|GO:0003887|GO:0006260|GO:0008408|GO:0009360 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 SRM_RS00740 efcb07b9adfd3d6c58cf80be433494bd 377 Pfam PF00712 DNA polymerase III beta subunit, N-terminal domain 1 124 1.1E-20 T 22-04-2016 IPR022634 DNA polymerase III, beta chain, N-terminal GO:0003677|GO:0003887|GO:0006260|GO:0008408|GO:0009360 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 SRM_RS00740 efcb07b9adfd3d6c58cf80be433494bd 377 TIGRFAM TIGR00663 dnan: DNA polymerase III, beta subunit 1 372 1.7E-77 T 22-04-2016 IPR001001 DNA polymerase III, beta chain GO:0003677|GO:0003887|GO:0006260|GO:0008408|GO:0009360 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 SRM_RS00740 efcb07b9adfd3d6c58cf80be433494bd 377 Gene3D G3DSA:3.10.150.10 252 372 3.2E-32 T 22-04-2016 SRM_RS06190 09f81934349ad52a833a1df7ec82c6df 538 Gene3D G3DSA:3.30.420.40 291 534 8.8E-31 T 22-04-2016 SRM_RS06190 09f81934349ad52a833a1df7ec82c6df 538 SUPERFAMILY SSF53067 40 284 4.71E-53 T 22-04-2016 SRM_RS06190 09f81934349ad52a833a1df7ec82c6df 538 Pfam PF02782 FGGY family of carbohydrate kinases, C-terminal domain 297 486 1.8E-16 T 22-04-2016 IPR018485 Carbohydrate kinase, FGGY, C-terminal GO:0005975|GO:0016773 SRM_RS06190 09f81934349ad52a833a1df7ec82c6df 538 Pfam PF00370 FGGY family of carbohydrate kinases, N-terminal domain 39 285 1.8E-44 T 22-04-2016 IPR018484 Carbohydrate kinase, FGGY, N-terminal GO:0005975|GO:0016773 SRM_RS06190 09f81934349ad52a833a1df7ec82c6df 538 PANTHER PTHR10196 37 526 3.0E-126 T 22-04-2016 SRM_RS06190 09f81934349ad52a833a1df7ec82c6df 538 Gene3D G3DSA:3.30.420.40 39 284 4.6E-50 T 22-04-2016 SRM_RS06190 09f81934349ad52a833a1df7ec82c6df 538 PANTHER PTHR10196:SF67 37 526 3.0E-126 T 22-04-2016 SRM_RS06190 09f81934349ad52a833a1df7ec82c6df 538 PIRSF PIRSF000538 37 536 1.0E-91 T 22-04-2016 IPR000577 Carbohydrate kinase, FGGY GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261|UniPathway: UPA00618 SRM_RS06190 09f81934349ad52a833a1df7ec82c6df 538 SUPERFAMILY SSF53067 291 528 3.88E-39 T 22-04-2016 SRM_RS15230 a29a3cffac77e4ab1f6abe829aa90caa 190 Pfam PF04542 Sigma-70 region 2 25 90 5.0E-14 T 22-04-2016 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 SRM_RS15230 a29a3cffac77e4ab1f6abe829aa90caa 190 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 20 180 8.4E-29 T 22-04-2016 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 SRM_RS15230 a29a3cffac77e4ab1f6abe829aa90caa 190 Pfam PF08281 Sigma-70, region 4 126 177 9.4E-14 T 22-04-2016 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 SRM_RS15230 a29a3cffac77e4ab1f6abe829aa90caa 190 SUPERFAMILY SSF88659 116 181 6.92E-13 T 22-04-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 SRM_RS15230 a29a3cffac77e4ab1f6abe829aa90caa 190 Gene3D G3DSA:1.10.1740.10 5 111 8.7E-27 T 22-04-2016 SRM_RS15230 a29a3cffac77e4ab1f6abe829aa90caa 190 PANTHER PTHR30173 1 184 1.6E-38 T 22-04-2016 SRM_RS15230 a29a3cffac77e4ab1f6abe829aa90caa 190 SUPERFAMILY SSF88946 2 98 1.73E-24 T 22-04-2016 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 SRM_RS15230 a29a3cffac77e4ab1f6abe829aa90caa 190 ProSitePatterns PS01063 Sigma-70 factors ECF subfamily signature. 47 78 - T 22-04-2016 IPR000838 RNA polymerase sigma factor 70, ECF, conserved site GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 SRM_RS15230 a29a3cffac77e4ab1f6abe829aa90caa 190 Gene3D G3DSA:1.10.10.10 119 184 3.4E-17 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SRM_RS06465 238fc356e4685818f536e4058379500b 396 SUPERFAMILY SSF52540 8 227 4.09E-62 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SRM_RS06465 238fc356e4685818f536e4058379500b 396 Pfam PF03143 Elongation factor Tu C-terminal domain 301 394 3.6E-31 T 22-04-2016 IPR004160 Translation elongation factor EFTu/EF1A, C-terminal SRM_RS06465 238fc356e4685818f536e4058379500b 396 PRINTS PR00315 GTP-binding elongation factor signature 59 67 4.6E-24 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 SRM_RS06465 238fc356e4685818f536e4058379500b 396 PRINTS PR00315 GTP-binding elongation factor signature 132 141 4.6E-24 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 SRM_RS06465 238fc356e4685818f536e4058379500b 396 PRINTS PR00315 GTP-binding elongation factor signature 14 27 4.6E-24 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 SRM_RS06465 238fc356e4685818f536e4058379500b 396 PRINTS PR00315 GTP-binding elongation factor signature 95 106 4.6E-24 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 SRM_RS06465 238fc356e4685818f536e4058379500b 396 PRINTS PR00315 GTP-binding elongation factor signature 79 89 4.6E-24 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 SRM_RS06465 238fc356e4685818f536e4058379500b 396 TIGRFAM TIGR00485 EF-Tu: translation elongation factor Tu 1 395 5.8E-220 T 22-04-2016 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle GO:0003746|GO:0005525|GO:0005622|GO:0006414 SRM_RS06465 238fc356e4685818f536e4058379500b 396 Gene3D G3DSA:2.40.30.10 213 300 8.5E-35 T 22-04-2016 SRM_RS06465 238fc356e4685818f536e4058379500b 396 PANTHER PTHR23115:SF112 1 394 2.9E-241 T 22-04-2016 SRM_RS06465 238fc356e4685818f536e4058379500b 396 PANTHER PTHR23115 1 394 2.9E-241 T 22-04-2016 SRM_RS06465 238fc356e4685818f536e4058379500b 396 Pfam PF03144 Elongation factor Tu domain 2 226 295 8.1E-16 T 22-04-2016 IPR004161 Translation elongation factor EFTu/EF1A, domain 2 GO:0005525 SRM_RS06465 238fc356e4685818f536e4058379500b 396 SUPERFAMILY SSF50465 304 396 6.91E-35 T 22-04-2016 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal SRM_RS06465 238fc356e4685818f536e4058379500b 396 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 13 152 1.8E-15 T 22-04-2016 IPR005225 Small GTP-binding protein domain GO:0005525 SRM_RS06465 238fc356e4685818f536e4058379500b 396 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 52 67 - T 22-04-2016 IPR031157 Tr-type G domain, conserved site SRM_RS06465 238fc356e4685818f536e4058379500b 396 Gene3D G3DSA:3.40.50.300 6 212 3.0E-71 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SRM_RS06465 238fc356e4685818f536e4058379500b 396 SUPERFAMILY SSF50447 206 303 1.62E-28 T 22-04-2016 IPR009000 Translation protein, beta-barrel domain SRM_RS06465 238fc356e4685818f536e4058379500b 396 Pfam PF00009 Elongation factor Tu GTP binding domain 10 202 1.3E-59 T 22-04-2016 SRM_RS06465 238fc356e4685818f536e4058379500b 396 Hamap MF_00118_B Elongation factor Tu [tuf]. 1 396 59.467 T 22-04-2016 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle GO:0003746|GO:0005525|GO:0005622|GO:0006414 SRM_RS06465 238fc356e4685818f536e4058379500b 396 Gene3D G3DSA:2.40.30.10 302 395 2.3E-44 T 22-04-2016 SRM_RS10180 238fc356e4685818f536e4058379500b 396 SUPERFAMILY SSF52540 8 227 4.09E-62 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SRM_RS10180 238fc356e4685818f536e4058379500b 396 Pfam PF03143 Elongation factor Tu C-terminal domain 301 394 3.6E-31 T 22-04-2016 IPR004160 Translation elongation factor EFTu/EF1A, C-terminal SRM_RS10180 238fc356e4685818f536e4058379500b 396 PRINTS PR00315 GTP-binding elongation factor signature 59 67 4.6E-24 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 SRM_RS10180 238fc356e4685818f536e4058379500b 396 PRINTS PR00315 GTP-binding elongation factor signature 132 141 4.6E-24 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 SRM_RS10180 238fc356e4685818f536e4058379500b 396 PRINTS PR00315 GTP-binding elongation factor signature 14 27 4.6E-24 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 SRM_RS10180 238fc356e4685818f536e4058379500b 396 PRINTS PR00315 GTP-binding elongation factor signature 95 106 4.6E-24 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 SRM_RS10180 238fc356e4685818f536e4058379500b 396 PRINTS PR00315 GTP-binding elongation factor signature 79 89 4.6E-24 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 SRM_RS10180 238fc356e4685818f536e4058379500b 396 TIGRFAM TIGR00485 EF-Tu: translation elongation factor Tu 1 395 5.8E-220 T 22-04-2016 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle GO:0003746|GO:0005525|GO:0005622|GO:0006414 SRM_RS10180 238fc356e4685818f536e4058379500b 396 Gene3D G3DSA:2.40.30.10 213 300 8.5E-35 T 22-04-2016 SRM_RS10180 238fc356e4685818f536e4058379500b 396 PANTHER PTHR23115:SF112 1 394 2.9E-241 T 22-04-2016 SRM_RS10180 238fc356e4685818f536e4058379500b 396 PANTHER PTHR23115 1 394 2.9E-241 T 22-04-2016 SRM_RS10180 238fc356e4685818f536e4058379500b 396 Pfam PF03144 Elongation factor Tu domain 2 226 295 8.1E-16 T 22-04-2016 IPR004161 Translation elongation factor EFTu/EF1A, domain 2 GO:0005525 SRM_RS10180 238fc356e4685818f536e4058379500b 396 SUPERFAMILY SSF50465 304 396 6.91E-35 T 22-04-2016 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal SRM_RS10180 238fc356e4685818f536e4058379500b 396 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 13 152 1.8E-15 T 22-04-2016 IPR005225 Small GTP-binding protein domain GO:0005525 SRM_RS10180 238fc356e4685818f536e4058379500b 396 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 52 67 - T 22-04-2016 IPR031157 Tr-type G domain, conserved site SRM_RS10180 238fc356e4685818f536e4058379500b 396 Gene3D G3DSA:3.40.50.300 6 212 3.0E-71 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SRM_RS10180 238fc356e4685818f536e4058379500b 396 SUPERFAMILY SSF50447 206 303 1.62E-28 T 22-04-2016 IPR009000 Translation protein, beta-barrel domain SRM_RS10180 238fc356e4685818f536e4058379500b 396 Pfam PF00009 Elongation factor Tu GTP binding domain 10 202 1.3E-59 T 22-04-2016 SRM_RS10180 238fc356e4685818f536e4058379500b 396 Hamap MF_00118_B Elongation factor Tu [tuf]. 1 396 59.467 T 22-04-2016 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle GO:0003746|GO:0005525|GO:0005622|GO:0006414 SRM_RS10180 238fc356e4685818f536e4058379500b 396 Gene3D G3DSA:2.40.30.10 302 395 2.3E-44 T 22-04-2016 SRM_RS15460 2e17248c91c537e7fa2d854aff536fd3 222 Pfam PF04493 Endonuclease V 24 216 5.6E-70 T 22-04-2016 IPR007581 Endonuclease V GO:0004519|GO:0006281 SRM_RS15460 2e17248c91c537e7fa2d854aff536fd3 222 PANTHER PTHR28511:SF1 1 220 2.7E-71 T 22-04-2016 SRM_RS15460 2e17248c91c537e7fa2d854aff536fd3 222 Hamap MF_00801 Endonuclease V [nfi]. 14 222 31.441 T 22-04-2016 IPR007581 Endonuclease V GO:0004519|GO:0006281 SRM_RS15460 2e17248c91c537e7fa2d854aff536fd3 222 PANTHER PTHR28511 1 220 2.7E-71 T 22-04-2016 SRM_RS08710 c7335b660eb89b19eae66fa7165c7efd 170 PANTHER PTHR40052 3 143 1.8E-52 T 22-04-2016 SRM_RS08710 c7335b660eb89b19eae66fa7165c7efd 170 PANTHER PTHR40052:SF2 3 143 1.8E-52 T 22-04-2016 SRM_RS08710 c7335b660eb89b19eae66fa7165c7efd 170 Pfam PF06491 Disulphide isomerase 3 140 1.5E-58 T 22-04-2016 IPR009474 Putative bacilliredoxin, YphP/YqiW family SRM_RS08710 c7335b660eb89b19eae66fa7165c7efd 170 TIGRFAM TIGR04191 YphP_YqiW: putative bacilliredoxin, YphP/YqiW family 3 140 7.2E-60 T 22-04-2016 IPR009474 Putative bacilliredoxin, YphP/YqiW family SRM_RS13630 faabe98f9a2d6af6bb62045cd92db19d 310 Gene3D G3DSA:3.40.50.720 17 263 1.5E-49 T 22-04-2016 IPR016040 NAD(P)-binding domain SRM_RS13630 faabe98f9a2d6af6bb62045cd92db19d 310 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 20 37 7.2E-9 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SRM_RS13630 faabe98f9a2d6af6bb62045cd92db19d 310 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 94 105 7.2E-9 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SRM_RS13630 faabe98f9a2d6af6bb62045cd92db19d 310 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 174 193 7.2E-9 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SRM_RS13630 faabe98f9a2d6af6bb62045cd92db19d 310 PANTHER PTHR24320:SF72 14 292 3.4E-79 T 22-04-2016 SRM_RS13630 faabe98f9a2d6af6bb62045cd92db19d 310 Pfam PF00106 short chain dehydrogenase 19 209 5.8E-27 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SRM_RS13630 faabe98f9a2d6af6bb62045cd92db19d 310 SUPERFAMILY SSF51735 17 264 1.15E-46 T 22-04-2016 IPR016040 NAD(P)-binding domain SRM_RS13630 faabe98f9a2d6af6bb62045cd92db19d 310 PANTHER PTHR24320 14 292 3.4E-79 T 22-04-2016 SRM_RS12840 681bdf9add8d73300f451eed108045e8 160 Gene3D G3DSA:3.10.580.10 12 141 4.2E-30 T 22-04-2016 SRM_RS12840 681bdf9add8d73300f451eed108045e8 160 SUPERFAMILY SSF54631 9 153 1.26E-30 T 22-04-2016 SRM_RS12840 681bdf9add8d73300f451eed108045e8 160 Pfam PF00571 CBS domain 19 70 1.7E-5 T 22-04-2016 IPR000644 CBS domain SRM_RS12840 681bdf9add8d73300f451eed108045e8 160 Pfam PF00571 CBS domain 85 134 3.8E-14 T 22-04-2016 IPR000644 CBS domain SRM_RS12840 681bdf9add8d73300f451eed108045e8 160 SMART SM00116 92 140 9.4E-11 T 22-04-2016 IPR000644 CBS domain SRM_RS12840 681bdf9add8d73300f451eed108045e8 160 SMART SM00116 27 74 0.8 T 22-04-2016 IPR000644 CBS domain SRM_RS12845 80b6ad019bc65ed177de24fec638bb51 613 ProSitePatterns PS00211 ABC transporters family signature. 481 495 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 SRM_RS12845 80b6ad019bc65ed177de24fec638bb51 613 Gene3D G3DSA:1.20.1560.10 18 329 2.5E-75 T 22-04-2016 SRM_RS12845 80b6ad019bc65ed177de24fec638bb51 613 PANTHER PTHR24221 5 597 7.0E-226 T 22-04-2016 SRM_RS12845 80b6ad019bc65ed177de24fec638bb51 613 Pfam PF00664 ABC transporter transmembrane region 33 301 3.8E-46 T 22-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 SRM_RS12845 80b6ad019bc65ed177de24fec638bb51 613 SUPERFAMILY SSF52540 340 582 2.0E-91 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SRM_RS12845 80b6ad019bc65ed177de24fec638bb51 613 SUPERFAMILY SSF90123 18 334 2.22E-74 T 22-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 SRM_RS12845 80b6ad019bc65ed177de24fec638bb51 613 Pfam PF00005 ABC transporter 360 509 8.2E-34 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 SRM_RS12845 80b6ad019bc65ed177de24fec638bb51 613 SMART SM00382 369 565 5.6E-14 T 22-04-2016 IPR003593 AAA+ ATPase domain SRM_RS12845 80b6ad019bc65ed177de24fec638bb51 613 Gene3D G3DSA:3.40.50.300 343 577 5.0E-83 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SRM_RS09780 2a34d8d629fa8cc755033a3db60c9dac 134 TIGRFAM TIGR01300 CPA3_mnhG_phaG: monovalent cation/proton antiporter, MnhG/PhaG subunit 11 93 2.0E-23 T 22-04-2016 IPR005133 Na+/H+ antiporter subunit G GO:0005451|GO:0015672|GO:0015992 SRM_RS09780 2a34d8d629fa8cc755033a3db60c9dac 134 Pfam PF03334 Na+/H+ antiporter subunit 11 90 7.0E-24 T 22-04-2016 IPR005133 Na+/H+ antiporter subunit G GO:0005451|GO:0015672|GO:0015992 SRM_RS09780 2a34d8d629fa8cc755033a3db60c9dac 134 PANTHER PTHR34703 1 116 1.6E-31 T 22-04-2016 SRM_RS09780 2a34d8d629fa8cc755033a3db60c9dac 134 PANTHER PTHR34703:SF1 1 116 1.6E-31 T 22-04-2016 SRM_RS10500 0fca579a9df04a567f5b7da450132218 654 TIGRFAM TIGR01129 secD: protein-export membrane protein SecD 64 639 9.3E-128 T 22-04-2016 IPR005791 Protein translocase subunit SecD GO:0006886|GO:0015450 SRM_RS10500 0fca579a9df04a567f5b7da450132218 654 SUPERFAMILY SSF82866 450 644 1.14E-39 T 22-04-2016 SRM_RS10500 0fca579a9df04a567f5b7da450132218 654 PANTHER PTHR30081:SF1 370 650 1.1E-123 T 22-04-2016 SRM_RS10500 0fca579a9df04a567f5b7da450132218 654 PANTHER PTHR30081:SF1 52 116 1.1E-123 T 22-04-2016 SRM_RS10500 0fca579a9df04a567f5b7da450132218 654 PANTHER PTHR30081:SF1 159 217 1.1E-123 T 22-04-2016 SRM_RS10500 0fca579a9df04a567f5b7da450132218 654 Pfam PF07549 SecD/SecF GG Motif 62 79 5.1E-5 T 22-04-2016 IPR022646 Protein-export membrane protein SecD/SecF/SecDF, conserved site SRM_RS10500 0fca579a9df04a567f5b7da450132218 654 Pfam PF02355 Protein export membrane protein 469 643 7.9E-24 T 22-04-2016 IPR022813 Protein-export membrane protein SecD/SecF, archaeal and bacterial SRM_RS10500 0fca579a9df04a567f5b7da450132218 654 PANTHER PTHR30081 370 650 1.1E-123 T 22-04-2016 SRM_RS10500 0fca579a9df04a567f5b7da450132218 654 PANTHER PTHR30081 52 116 1.1E-123 T 22-04-2016 SRM_RS10500 0fca579a9df04a567f5b7da450132218 654 PANTHER PTHR30081 159 217 1.1E-123 T 22-04-2016 SRM_RS10500 0fca579a9df04a567f5b7da450132218 654 PRINTS PR00702 Acriflavin resistance protein family signature 542 566 9.2E-7 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 SRM_RS10500 0fca579a9df04a567f5b7da450132218 654 PRINTS PR00702 Acriflavin resistance protein family signature 489 512 9.2E-7 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 SRM_RS10500 0fca579a9df04a567f5b7da450132218 654 PRINTS PR00702 Acriflavin resistance protein family signature 617 640 9.2E-7 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 SRM_RS10500 0fca579a9df04a567f5b7da450132218 654 TIGRFAM TIGR00916 2A0604s01: protein-export membrane protein, SecD/SecF family 404 633 6.3E-75 T 22-04-2016 IPR022645 Protein-export membrane protein SecD/SecF, bacterial SRM_RS10500 0fca579a9df04a567f5b7da450132218 654 Hamap MF_01463_B Protein translocase subunit SecD [secD]. 1 654 41.172 T 22-04-2016 IPR005791 Protein translocase subunit SecD GO:0006886|GO:0015450 SRM_RS10500 0fca579a9df04a567f5b7da450132218 654 Gene3D G3DSA:1.20.1640.10 449 644 5.4E-29 T 22-04-2016 SRM_RS11590 9eedf88ee77e3a91c18dc2e53e8fc844 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 169 186 2.6E-26 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SRM_RS11590 9eedf88ee77e3a91c18dc2e53e8fc844 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 76 87 2.6E-26 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SRM_RS11590 9eedf88ee77e3a91c18dc2e53e8fc844 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 210 230 2.6E-26 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SRM_RS11590 9eedf88ee77e3a91c18dc2e53e8fc844 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 148 167 2.6E-26 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SRM_RS11590 9eedf88ee77e3a91c18dc2e53e8fc844 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 122 138 2.6E-26 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SRM_RS11590 9eedf88ee77e3a91c18dc2e53e8fc844 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 7 24 2.6E-26 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SRM_RS11590 9eedf88ee77e3a91c18dc2e53e8fc844 252 Gene3D G3DSA:3.40.50.720 7 246 2.2E-62 T 22-04-2016 IPR016040 NAD(P)-binding domain SRM_RS11590 9eedf88ee77e3a91c18dc2e53e8fc844 252 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 12 246 6.5E-56 T 22-04-2016 SRM_RS11590 9eedf88ee77e3a91c18dc2e53e8fc844 252 SUPERFAMILY SSF51735 7 246 2.39E-62 T 22-04-2016 IPR016040 NAD(P)-binding domain SRM_RS11590 9eedf88ee77e3a91c18dc2e53e8fc844 252 PANTHER PTHR24322 10 132 1.3E-45 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SRM_RS11590 9eedf88ee77e3a91c18dc2e53e8fc844 252 PANTHER PTHR24322 148 180 1.3E-45 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SRM_RS11590 9eedf88ee77e3a91c18dc2e53e8fc844 252 PANTHER PTHR24322:SF511 10 132 1.3E-45 T 22-04-2016 SRM_RS11590 9eedf88ee77e3a91c18dc2e53e8fc844 252 PANTHER PTHR24322:SF511 148 180 1.3E-45 T 22-04-2016 SRM_RS11745 debb4131a5fa99ad90baa090e5ec7238 307 PANTHER PTHR10625 9 299 2.5E-105 T 22-04-2016 IPR000286 Histone deacetylase superfamily SRM_RS11745 debb4131a5fa99ad90baa090e5ec7238 307 PANTHER PTHR10625:SF131 9 299 2.5E-105 T 22-04-2016 SRM_RS11745 debb4131a5fa99ad90baa090e5ec7238 307 PRINTS PR01270 Histone deacetylase superfamily signature 115 138 8.7E-13 T 22-04-2016 IPR000286 Histone deacetylase superfamily SRM_RS11745 debb4131a5fa99ad90baa090e5ec7238 307 PRINTS PR01270 Histone deacetylase superfamily signature 223 233 8.7E-13 T 22-04-2016 IPR000286 Histone deacetylase superfamily SRM_RS11745 debb4131a5fa99ad90baa090e5ec7238 307 PRINTS PR01270 Histone deacetylase superfamily signature 149 164 8.7E-13 T 22-04-2016 IPR000286 Histone deacetylase superfamily SRM_RS11745 debb4131a5fa99ad90baa090e5ec7238 307 Pfam PF00850 Histone deacetylase domain 21 279 1.3E-49 T 22-04-2016 IPR023801 Histone deacetylase domain SRM_RS11745 debb4131a5fa99ad90baa090e5ec7238 307 Gene3D G3DSA:3.40.800.20 13 286 2.1E-62 T 22-04-2016 IPR023801 Histone deacetylase domain SRM_RS11745 debb4131a5fa99ad90baa090e5ec7238 307 SUPERFAMILY SSF52768 7 279 1.01E-76 T 22-04-2016 SRM_RS05340 09af61c277b05b4d8c8c0a57d05a0621 374 PANTHER PTHR23264:SF19 1 362 3.0E-144 T 22-04-2016 SRM_RS05340 09af61c277b05b4d8c8c0a57d05a0621 374 Pfam PF01883 Domain of unknown function DUF59 5 68 3.9E-11 T 22-04-2016 IPR002744 Domain of unknown function DUF59 SRM_RS05340 09af61c277b05b4d8c8c0a57d05a0621 374 Hamap MF_02040 Iron-sulfur cluster carrier protein. 100 353 36.783 T 22-04-2016 IPR019591 Mrp/NBP35 ATP-binding protein SRM_RS05340 09af61c277b05b4d8c8c0a57d05a0621 374 SUPERFAMILY SSF117916 1 83 9.81E-13 T 22-04-2016 SRM_RS05340 09af61c277b05b4d8c8c0a57d05a0621 374 Gene3D G3DSA:3.40.50.300 101 351 2.4E-103 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SRM_RS05340 09af61c277b05b4d8c8c0a57d05a0621 374 SUPERFAMILY SSF52540 110 357 1.8E-59 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SRM_RS05340 09af61c277b05b4d8c8c0a57d05a0621 374 Pfam PF10609 NUBPL iron-transfer P-loop NTPase 108 352 2.1E-101 T 22-04-2016 IPR019591 Mrp/NBP35 ATP-binding protein SRM_RS05340 09af61c277b05b4d8c8c0a57d05a0621 374 PANTHER PTHR23264 1 362 3.0E-144 T 22-04-2016 IPR019591 Mrp/NBP35 ATP-binding protein SRM_RS03305 4c50fa9108912dc0de602ea32f7242d0 470 Pfam PF01053 Cys/Met metabolism PLP-dependent enzyme 39 461 1.5E-141 T 22-04-2016 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 SRM_RS03305 4c50fa9108912dc0de602ea32f7242d0 470 PANTHER PTHR11808:SF12 305 466 4.1E-257 T 22-04-2016 IPR006235 O-acetylhomoserine/O-acetylserine sulfhydrylase GO:0006520|GO:0016765 KEGG: 00270+2.5.1.49|MetaCyc: PWY-5344|MetaCyc: PWY-7174 SRM_RS03305 4c50fa9108912dc0de602ea32f7242d0 470 PANTHER PTHR11808:SF12 4 268 4.1E-257 T 22-04-2016 IPR006235 O-acetylhomoserine/O-acetylserine sulfhydrylase GO:0006520|GO:0016765 KEGG: 00270+2.5.1.49|MetaCyc: PWY-5344|MetaCyc: PWY-7174 SRM_RS03305 4c50fa9108912dc0de602ea32f7242d0 470 PIRSF PIRSF001434 25 465 2.8E-123 T 22-04-2016 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 SRM_RS03305 4c50fa9108912dc0de602ea32f7242d0 470 Gene3D G3DSA:3.40.640.10 38 326 2.1E-118 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 SRM_RS03305 4c50fa9108912dc0de602ea32f7242d0 470 PANTHER PTHR11808 305 466 4.1E-257 T 22-04-2016 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 SRM_RS03305 4c50fa9108912dc0de602ea32f7242d0 470 PANTHER PTHR11808 4 268 4.1E-257 T 22-04-2016 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 SRM_RS03305 4c50fa9108912dc0de602ea32f7242d0 470 ProSitePatterns PS00868 Cys/Met metabolism enzymes pyridoxal-phosphate attachment site. 232 246 - T 22-04-2016 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 SRM_RS03305 4c50fa9108912dc0de602ea32f7242d0 470 TIGRFAM TIGR01326 OAH_OAS_sulfhy: O-acetylhomoserine aminocarboxypropyltransferase/cysteine synthase 38 462 2.6E-202 T 22-04-2016 IPR006235 O-acetylhomoserine/O-acetylserine sulfhydrylase GO:0006520|GO:0016765 KEGG: 00270+2.5.1.49|MetaCyc: PWY-5344|MetaCyc: PWY-7174 SRM_RS03305 4c50fa9108912dc0de602ea32f7242d0 470 SUPERFAMILY SSF53383 38 461 5.59E-125 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase SRM_RS03305 4c50fa9108912dc0de602ea32f7242d0 470 Gene3D G3DSA:3.90.1150.10 328 464 2.2E-50 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 SRM_RS14635 ce765ba95125da4845c9efe889c8a33e 465 TIGRFAM TIGR02492 flgK_ends: flagellar hook-associated protein FlgK 5 462 8.0E-71 T 22-04-2016 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 SRM_RS14635 ce765ba95125da4845c9efe889c8a33e 465 PRINTS PR01005 Flagellar hook-associated protein signature 133 153 6.2E-6 T 22-04-2016 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 SRM_RS14635 ce765ba95125da4845c9efe889c8a33e 465 PRINTS PR01005 Flagellar hook-associated protein signature 276 298 6.2E-6 T 22-04-2016 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 SRM_RS14635 ce765ba95125da4845c9efe889c8a33e 465 PRINTS PR01005 Flagellar hook-associated protein signature 166 190 6.2E-6 T 22-04-2016 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 SRM_RS14635 ce765ba95125da4845c9efe889c8a33e 465 PRINTS PR01005 Flagellar hook-associated protein signature 13 36 6.2E-6 T 22-04-2016 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 SRM_RS14635 ce765ba95125da4845c9efe889c8a33e 465 SUPERFAMILY SSF64518 142 462 1.16E-13 T 22-04-2016 SRM_RS14635 ce765ba95125da4845c9efe889c8a33e 465 PANTHER PTHR30033:SF1 1 332 9.6E-56 T 22-04-2016 SRM_RS14635 ce765ba95125da4845c9efe889c8a33e 465 PANTHER PTHR30033 1 332 9.6E-56 T 22-04-2016 SRM_RS14635 ce765ba95125da4845c9efe889c8a33e 465 Pfam PF06429 Flagellar basal body rod FlgEFG protein C-terminal 402 462 1.1E-8 T 22-04-2016 IPR010930 Flagellar basal-body/hook protein, C-terminal domain SRM_RS13645 b4834eb2f9cca6f1412263c0380dc202 699 Pfam PF07728 AAA domain (dynein-related subfamily) 63 181 1.0E-6 T 22-04-2016 IPR011704 ATPase, dynein-related, AAA domain GO:0005524|GO:0016887 SRM_RS13645 b4834eb2f9cca6f1412263c0380dc202 699 Gene3D G3DSA:3.40.50.300 39 212 2.2E-12 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SRM_RS13645 b4834eb2f9cca6f1412263c0380dc202 699 SUPERFAMILY SSF52540 54 231 4.32E-16 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SRM_RS05120 daa051eaf56123e6fe1307ca5ba3b0f9 551 SMART SM00245 173 367 1.0E-59 T 22-04-2016 IPR005151 Tail specific protease GO:0006508|GO:0008236 SRM_RS05120 daa051eaf56123e6fe1307ca5ba3b0f9 551 PANTHER PTHR32060:SF0 55 357 4.6E-99 T 22-04-2016 SRM_RS05120 daa051eaf56123e6fe1307ca5ba3b0f9 551 SUPERFAMILY SSF52096 38 118 6.46E-64 T 22-04-2016 IPR029045 ClpP/crotonase-like domain SRM_RS05120 daa051eaf56123e6fe1307ca5ba3b0f9 551 SUPERFAMILY SSF52096 195 370 6.46E-64 T 22-04-2016 IPR029045 ClpP/crotonase-like domain SRM_RS05120 daa051eaf56123e6fe1307ca5ba3b0f9 551 Gene3D G3DSA:3.30.750.44 69 105 1.6E-4 T 22-04-2016 SRM_RS05120 daa051eaf56123e6fe1307ca5ba3b0f9 551 Pfam PF03572 Peptidase family S41 202 359 6.3E-48 T 22-04-2016 IPR005151 Tail specific protease GO:0006508|GO:0008236 SRM_RS05120 daa051eaf56123e6fe1307ca5ba3b0f9 551 SMART SM00228 100 171 9.6E-9 T 22-04-2016 IPR001478 PDZ domain GO:0005515 SRM_RS05120 daa051eaf56123e6fe1307ca5ba3b0f9 551 SUPERFAMILY SSF50156 71 192 1.18E-19 T 22-04-2016 IPR001478 PDZ domain GO:0005515 SRM_RS05120 daa051eaf56123e6fe1307ca5ba3b0f9 551 Gene3D G3DSA:3.90.226.10 182 396 6.3E-58 T 22-04-2016 IPR029045 ClpP/crotonase-like domain SRM_RS05120 daa051eaf56123e6fe1307ca5ba3b0f9 551 Gene3D G3DSA:3.90.226.10 517 535 6.3E-58 T 22-04-2016 IPR029045 ClpP/crotonase-like domain SRM_RS05120 daa051eaf56123e6fe1307ca5ba3b0f9 551 Gene3D G3DSA:2.30.42.10 106 181 2.8E-22 T 22-04-2016 IPR001478 PDZ domain GO:0005515 SRM_RS05120 daa051eaf56123e6fe1307ca5ba3b0f9 551 PANTHER PTHR32060 55 357 4.6E-99 T 22-04-2016 SRM_RS05120 daa051eaf56123e6fe1307ca5ba3b0f9 551 Pfam PF13180 PDZ domain 102 180 2.1E-9 T 22-04-2016 IPR001478 PDZ domain GO:0005515 SRM_RS05120 daa051eaf56123e6fe1307ca5ba3b0f9 551 TIGRFAM TIGR00225 prc: C-terminal processing peptidase 70 365 2.0E-85 T 22-04-2016 IPR004447 C-terminal-processing peptidase S41A GO:0006508|GO:0008236 SRM_RS11260 93c85407d1fb6349ea34305dc81f6452 411 ProSitePatterns PS00470 Isocitrate and isopropylmalate dehydrogenases signature. 297 316 - T 22-04-2016 IPR019818 Isocitrate/isopropylmalate dehydrogenase, conserved site GO:0000287|GO:0016616|GO:0051287|GO:0055114 Reactome: REACT_1046 SRM_RS11260 93c85407d1fb6349ea34305dc81f6452 411 SUPERFAMILY SSF53659 4 410 3.06E-134 T 22-04-2016 SRM_RS11260 93c85407d1fb6349ea34305dc81f6452 411 TIGRFAM TIGR00183 prok_nadp_idh: isocitrate dehydrogenase, NADP-dependent 4 410 1.7E-185 T 22-04-2016 IPR004439 Isocitrate dehydrogenase NADP-dependent, dimeric, prokaryotic GO:0004450|GO:0006099|GO:0055114 KEGG: 00020+1.1.1.42|KEGG: 00480+1.1.1.42|KEGG: 00720+1.1.1.42|MetaCyc: PWY-5913|MetaCyc: PWY-6549|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7124|MetaCyc: PWY-7254|MetaCyc: PWY-7268 SRM_RS11260 93c85407d1fb6349ea34305dc81f6452 411 Pfam PF00180 Isocitrate/isopropylmalate dehydrogenase 23 406 2.9E-101 T 22-04-2016 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 SRM_RS11260 93c85407d1fb6349ea34305dc81f6452 411 PANTHER PTHR11835 175 248 3.3E-205 T 22-04-2016 IPR001804 Isocitrate and isopropylmalate dehydrogenases family GO:0000287|GO:0016616|GO:0051287|GO:0055114 Reactome: REACT_1046 SRM_RS11260 93c85407d1fb6349ea34305dc81f6452 411 PANTHER PTHR11835 1 156 3.3E-205 T 22-04-2016 IPR001804 Isocitrate and isopropylmalate dehydrogenases family GO:0000287|GO:0016616|GO:0051287|GO:0055114 Reactome: REACT_1046 SRM_RS11260 93c85407d1fb6349ea34305dc81f6452 411 PANTHER PTHR11835 269 410 3.3E-205 T 22-04-2016 IPR001804 Isocitrate and isopropylmalate dehydrogenases family GO:0000287|GO:0016616|GO:0051287|GO:0055114 Reactome: REACT_1046 SRM_RS11260 93c85407d1fb6349ea34305dc81f6452 411 Gene3D G3DSA:3.40.718.10 6 410 1.5E-147 T 22-04-2016 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 SRM_RS11260 93c85407d1fb6349ea34305dc81f6452 411 PANTHER PTHR11835:SF52 175 248 3.3E-205 T 22-04-2016 SRM_RS11260 93c85407d1fb6349ea34305dc81f6452 411 PANTHER PTHR11835:SF52 1 156 3.3E-205 T 22-04-2016 SRM_RS11260 93c85407d1fb6349ea34305dc81f6452 411 PANTHER PTHR11835:SF52 269 410 3.3E-205 T 22-04-2016 SRM_RS11260 93c85407d1fb6349ea34305dc81f6452 411 SMART SM01329 22 406 3.1E-166 T 22-04-2016 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 SRM_RS10970 9b794204cc94971005e2b09cd16c99eb 1116 Gene3D G3DSA:2.60.40.1120 37 132 3.6E-13 T 22-04-2016 IPR014766 Carboxypeptidase, regulatory domain SRM_RS10970 9b794204cc94971005e2b09cd16c99eb 1116 SUPERFAMILY SSF49464 36 131 1.88E-14 T 22-04-2016 IPR008969 Carboxypeptidase-like, regulatory domain SRM_RS10970 9b794204cc94971005e2b09cd16c99eb 1116 Pfam PF13620 Carboxypeptidase regulatory-like domain 36 118 1.8E-19 T 22-04-2016 SRM_RS10970 9b794204cc94971005e2b09cd16c99eb 1116 PANTHER PTHR30069:SF6 1 676 9.4E-94 T 22-04-2016 SRM_RS10970 9b794204cc94971005e2b09cd16c99eb 1116 PANTHER PTHR30069:SF6 704 1041 9.4E-94 T 22-04-2016 SRM_RS10970 9b794204cc94971005e2b09cd16c99eb 1116 PANTHER PTHR30069 1 676 9.4E-94 T 22-04-2016 SRM_RS10970 9b794204cc94971005e2b09cd16c99eb 1116 PANTHER PTHR30069 704 1041 9.4E-94 T 22-04-2016 SRM_RS10970 9b794204cc94971005e2b09cd16c99eb 1116 Gene3D G3DSA:2.40.170.20 685 941 7.3E-39 T 22-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 SRM_RS10970 9b794204cc94971005e2b09cd16c99eb 1116 Gene3D G3DSA:2.40.170.20 551 649 7.3E-39 T 22-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 SRM_RS10970 9b794204cc94971005e2b09cd16c99eb 1116 Gene3D G3DSA:2.40.170.20 994 1042 7.3E-39 T 22-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 SRM_RS10970 9b794204cc94971005e2b09cd16c99eb 1116 Gene3D G3DSA:2.40.170.20 241 508 7.3E-39 T 22-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 SRM_RS10970 9b794204cc94971005e2b09cd16c99eb 1116 SUPERFAMILY SSF56935 358 658 4.3E-54 T 22-04-2016 SRM_RS10970 9b794204cc94971005e2b09cd16c99eb 1116 SUPERFAMILY SSF56935 996 1043 4.3E-54 T 22-04-2016 SRM_RS10970 9b794204cc94971005e2b09cd16c99eb 1116 SUPERFAMILY SSF56935 115 316 4.3E-54 T 22-04-2016 SRM_RS10970 9b794204cc94971005e2b09cd16c99eb 1116 SUPERFAMILY SSF56935 826 940 4.3E-54 T 22-04-2016 SRM_RS10970 9b794204cc94971005e2b09cd16c99eb 1116 SUPERFAMILY SSF56935 739 784 4.3E-54 T 22-04-2016 SRM_RS14820 b4374f4c2dfe27f8bd7b59dffa344d3c 342 PANTHER PTHR10657:SF11 66 326 7.0E-34 T 22-04-2016 SRM_RS14820 b4374f4c2dfe27f8bd7b59dffa344d3c 342 SUPERFAMILY SSF109998 62 219 8.83E-19 T 22-04-2016 IPR027304 Trigger factor/SurA domain SRM_RS14820 b4374f4c2dfe27f8bd7b59dffa344d3c 342 SUPERFAMILY SSF54534 190 292 1.57E-24 T 22-04-2016 SRM_RS14820 b4374f4c2dfe27f8bd7b59dffa344d3c 342 Gene3D G3DSA:3.10.50.40 187 315 3.0E-31 T 22-04-2016 SRM_RS14820 b4374f4c2dfe27f8bd7b59dffa344d3c 342 ProSitePatterns PS01096 PpiC-type peptidyl-prolyl cis-trans isomerase signature. 231 251 - T 22-04-2016 IPR023058 Peptidyl-prolyl cis-trans isomerase, PpiC-type, conserved site SRM_RS14820 b4374f4c2dfe27f8bd7b59dffa344d3c 342 Pfam PF13624 SurA N-terminal domain 63 167 1.5E-8 T 22-04-2016 SRM_RS14820 b4374f4c2dfe27f8bd7b59dffa344d3c 342 PANTHER PTHR10657 66 326 7.0E-34 T 22-04-2016 SRM_RS14820 b4374f4c2dfe27f8bd7b59dffa344d3c 342 Pfam PF00639 PPIC-type PPIASE domain 196 292 1.5E-20 T 22-04-2016 IPR000297 Peptidyl-prolyl cis-trans isomerase, PpiC-type GO:0016853 SRM_RS04610 65df8258befeda52c74691bdc156b0c2 465 SUPERFAMILY SSF55785 133 245 9.42E-34 T 22-04-2016 IPR000014 PAS domain SRM_RS04610 65df8258befeda52c74691bdc156b0c2 465 Pfam PF00989 PAS fold 125 235 1.7E-17 T 22-04-2016 IPR013767 PAS fold GO:0006355 SRM_RS04610 65df8258befeda52c74691bdc156b0c2 465 PRINTS PR00344 Bacterial sensor protein C-terminal signature 434 447 2.6E-7 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SRM_RS04610 65df8258befeda52c74691bdc156b0c2 465 PRINTS PR00344 Bacterial sensor protein C-terminal signature 410 428 2.6E-7 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SRM_RS04610 65df8258befeda52c74691bdc156b0c2 465 PRINTS PR00344 Bacterial sensor protein C-terminal signature 393 407 2.6E-7 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SRM_RS04610 65df8258befeda52c74691bdc156b0c2 465 Gene3D G3DSA:3.30.565.10 319 449 8.7E-17 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SRM_RS04610 65df8258befeda52c74691bdc156b0c2 465 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 118 244 1.1E-36 T 22-04-2016 IPR000014 PAS domain SRM_RS04610 65df8258befeda52c74691bdc156b0c2 465 SMART SM00387 357 450 1.0E-13 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SRM_RS04610 65df8258befeda52c74691bdc156b0c2 465 Pfam PF07730 Histidine kinase 252 316 3.4E-12 T 22-04-2016 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain GO:0000155|GO:0000160|GO:0016021|GO:0046983 SRM_RS04610 65df8258befeda52c74691bdc156b0c2 465 PANTHER PTHR24423 8 33 7.3E-42 T 22-04-2016 SRM_RS04610 65df8258befeda52c74691bdc156b0c2 465 PANTHER PTHR24423 106 462 7.3E-42 T 22-04-2016 SRM_RS04610 65df8258befeda52c74691bdc156b0c2 465 Gene3D G3DSA:3.30.450.20 111 236 6.6E-34 T 22-04-2016 SRM_RS04610 65df8258befeda52c74691bdc156b0c2 465 SMART SM00091 122 188 2.7E-15 T 22-04-2016 IPR000014 PAS domain SRM_RS04610 65df8258befeda52c74691bdc156b0c2 465 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 359 449 4.1E-11 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SRM_RS04610 65df8258befeda52c74691bdc156b0c2 465 SUPERFAMILY SSF55874 321 447 9.4E-23 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SRM_RS16075 430c09b886076ceb4ba47b231b3c45b1 244 Gene3D G3DSA:3.40.50.150 11 196 3.7E-36 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SRM_RS16075 430c09b886076ceb4ba47b231b3c45b1 244 PANTHER PTHR10108 14 195 2.8E-28 T 22-04-2016 SRM_RS16075 430c09b886076ceb4ba47b231b3c45b1 244 Pfam PF08241 Methyltransferase domain 58 151 5.7E-22 T 22-04-2016 IPR013216 Methyltransferase type 11 GO:0008152|GO:0008168 SRM_RS16075 430c09b886076ceb4ba47b231b3c45b1 244 SUPERFAMILY SSF53335 31 198 1.98E-36 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SRM_RS13315 f1d757ddeebd6b3d9d18f5a224188d9b 632 Gene3D G3DSA:3.40.50.980 8 196 1.1E-36 T 22-04-2016 SRM_RS13315 f1d757ddeebd6b3d9d18f5a224188d9b 632 Gene3D G3DSA:3.30.300.30 494 618 6.2E-5 T 22-04-2016 SRM_RS13315 f1d757ddeebd6b3d9d18f5a224188d9b 632 Gene3D G3DSA:3.40.50.980 342 403 1.3E-37 T 22-04-2016 SRM_RS13315 f1d757ddeebd6b3d9d18f5a224188d9b 632 Gene3D G3DSA:3.40.50.980 197 288 1.3E-37 T 22-04-2016 SRM_RS13315 f1d757ddeebd6b3d9d18f5a224188d9b 632 PANTHER PTHR24096:SF193 6 632 1.3E-195 T 22-04-2016 SRM_RS13315 f1d757ddeebd6b3d9d18f5a224188d9b 632 Gene3D G3DSA:2.30.38.10 404 487 3.1E-23 T 22-04-2016 SRM_RS13315 f1d757ddeebd6b3d9d18f5a224188d9b 632 ProSitePatterns PS00455 Putative AMP-binding domain signature. 190 201 - T 22-04-2016 IPR020845 AMP-binding, conserved site SRM_RS13315 f1d757ddeebd6b3d9d18f5a224188d9b 632 Pfam PF00501 AMP-binding enzyme 26 496 1.6E-103 T 22-04-2016 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 SRM_RS13315 f1d757ddeebd6b3d9d18f5a224188d9b 632 PANTHER PTHR24096 6 632 1.3E-195 T 22-04-2016 SRM_RS13315 f1d757ddeebd6b3d9d18f5a224188d9b 632 SUPERFAMILY SSF56801 345 628 2.62E-126 T 22-04-2016 SRM_RS13315 f1d757ddeebd6b3d9d18f5a224188d9b 632 SUPERFAMILY SSF56801 7 293 2.62E-126 T 22-04-2016 SRM_RS03155 d144354f2bd96e04378c4ecb0eaaefe3 981 Gene3D G3DSA:1.20.1580.10 735 861 6.1E-52 T 22-04-2016 SRM_RS03155 d144354f2bd96e04378c4ecb0eaaefe3 981 Gene3D G3DSA:1.10.8.280 343 429 1.2E-13 T 22-04-2016 SRM_RS03155 d144354f2bd96e04378c4ecb0eaaefe3 981 SMART SM00382 673 949 0.063 T 22-04-2016 IPR003593 AAA+ ATPase domain SRM_RS03155 d144354f2bd96e04378c4ecb0eaaefe3 981 SMART SM00382 48 605 7.7 T 22-04-2016 IPR003593 AAA+ ATPase domain SRM_RS03155 d144354f2bd96e04378c4ecb0eaaefe3 981 TIGRFAM TIGR00630 uvra: excinuclease ABC subunit A 29 966 0.0 T 22-04-2016 IPR004602 UvrABC system subunit A GO:0006289|GO:0009380|GO:0009381 SRM_RS03155 d144354f2bd96e04378c4ecb0eaaefe3 981 PANTHER PTHR32282:SF2 300 981 0.0 T 22-04-2016 SRM_RS03155 d144354f2bd96e04378c4ecb0eaaefe3 981 PANTHER PTHR32282:SF2 229 282 0.0 T 22-04-2016 SRM_RS03155 d144354f2bd96e04378c4ecb0eaaefe3 981 PANTHER PTHR32282:SF2 25 209 0.0 T 22-04-2016 SRM_RS03155 d144354f2bd96e04378c4ecb0eaaefe3 981 SUPERFAMILY SSF52540 659 955 3.19E-46 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SRM_RS03155 d144354f2bd96e04378c4ecb0eaaefe3 981 Gene3D G3DSA:3.30.1490.20 239 276 1.0E-9 T 22-04-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 SRM_RS03155 d144354f2bd96e04378c4ecb0eaaefe3 981 Gene3D G3DSA:3.30.1490.20 156 179 1.0E-9 T 22-04-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 SRM_RS03155 d144354f2bd96e04378c4ecb0eaaefe3 981 PANTHER PTHR32282 300 981 0.0 T 22-04-2016 SRM_RS03155 d144354f2bd96e04378c4ecb0eaaefe3 981 PANTHER PTHR32282 229 282 0.0 T 22-04-2016 SRM_RS03155 d144354f2bd96e04378c4ecb0eaaefe3 981 PANTHER PTHR32282 25 209 0.0 T 22-04-2016 SRM_RS03155 d144354f2bd96e04378c4ecb0eaaefe3 981 SUPERFAMILY SSF52540 31 222 5.61E-43 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SRM_RS03155 d144354f2bd96e04378c4ecb0eaaefe3 981 SUPERFAMILY SSF52540 471 610 5.61E-43 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SRM_RS03155 d144354f2bd96e04378c4ecb0eaaefe3 981 Gene3D G3DSA:3.40.50.300 862 979 4.2E-57 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SRM_RS03155 d144354f2bd96e04378c4ecb0eaaefe3 981 Gene3D G3DSA:3.40.50.300 519 638 3.5E-56 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SRM_RS03155 d144354f2bd96e04378c4ecb0eaaefe3 981 Gene3D G3DSA:3.40.50.300 642 715 4.2E-57 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SRM_RS03155 d144354f2bd96e04378c4ecb0eaaefe3 981 Gene3D G3DSA:3.40.50.300 23 76 3.5E-56 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SRM_RS03155 d144354f2bd96e04378c4ecb0eaaefe3 981 Gene3D G3DSA:1.20.1580.10 117 154 3.0E-45 T 22-04-2016 SRM_RS03155 d144354f2bd96e04378c4ecb0eaaefe3 981 Gene3D G3DSA:1.20.1580.10 442 518 3.0E-45 T 22-04-2016 SRM_RS03155 d144354f2bd96e04378c4ecb0eaaefe3 981 Gene3D G3DSA:1.20.1580.10 306 339 3.0E-45 T 22-04-2016 SRM_RS03155 d144354f2bd96e04378c4ecb0eaaefe3 981 Pfam PF00005 ABC transporter 664 901 5.2E-9 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 SRM_RS13375 d72a7e90d180257cd43ecb5426fb66e2 488 Gene3D G3DSA:3.50.50.60 4 145 1.8E-31 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SRM_RS13375 d72a7e90d180257cd43ecb5426fb66e2 488 PIRSF PIRSF000350 1 461 4.9E-105 T 22-04-2016 SRM_RS13375 d72a7e90d180257cd43ecb5426fb66e2 488 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 177 195 9.9E-29 T 22-04-2016 SRM_RS13375 d72a7e90d180257cd43ecb5426fb66e2 488 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 7 26 9.9E-29 T 22-04-2016 SRM_RS13375 d72a7e90d180257cd43ecb5426fb66e2 488 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 289 311 9.9E-29 T 22-04-2016 SRM_RS13375 d72a7e90d180257cd43ecb5426fb66e2 488 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 138 156 9.9E-29 T 22-04-2016 SRM_RS13375 d72a7e90d180257cd43ecb5426fb66e2 488 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 261 277 9.9E-29 T 22-04-2016 SRM_RS13375 d72a7e90d180257cd43ecb5426fb66e2 488 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 5 320 3.1E-57 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SRM_RS13375 d72a7e90d180257cd43ecb5426fb66e2 488 Pfam PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain 344 450 3.7E-25 T 22-04-2016 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 SRM_RS13375 d72a7e90d180257cd43ecb5426fb66e2 488 PANTHER PTHR22912:SF29 1 456 2.9E-160 T 22-04-2016 SRM_RS13375 d72a7e90d180257cd43ecb5426fb66e2 488 SUPERFAMILY SSF55424 340 457 1.43E-30 T 22-04-2016 IPR016156 FAD/NAD-linked reductase, dimerisation domain GO:0016491|GO:0050660|GO:0055114 SRM_RS13375 d72a7e90d180257cd43ecb5426fb66e2 488 Gene3D G3DSA:3.50.50.60 146 332 5.4E-51 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SRM_RS13375 d72a7e90d180257cd43ecb5426fb66e2 488 Gene3D G3DSA:3.30.390.30 338 456 1.3E-35 T 22-04-2016 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 SRM_RS13375 d72a7e90d180257cd43ecb5426fb66e2 488 PANTHER PTHR22912 1 456 2.9E-160 T 22-04-2016 SRM_RS13375 d72a7e90d180257cd43ecb5426fb66e2 488 SUPERFAMILY SSF51905 1 331 2.76E-54 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SRM_RS13375 d72a7e90d180257cd43ecb5426fb66e2 488 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 141 150 1.7E-58 T 22-04-2016 SRM_RS13375 d72a7e90d180257cd43ecb5426fb66e2 488 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 177 202 1.7E-58 T 22-04-2016 SRM_RS13375 d72a7e90d180257cd43ecb5426fb66e2 488 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 6 28 1.7E-58 T 22-04-2016 SRM_RS13375 d72a7e90d180257cd43ecb5426fb66e2 488 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 340 361 1.7E-58 T 22-04-2016 SRM_RS13375 d72a7e90d180257cd43ecb5426fb66e2 488 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 427 447 1.7E-58 T 22-04-2016 SRM_RS13375 d72a7e90d180257cd43ecb5426fb66e2 488 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 405 420 1.7E-58 T 22-04-2016 SRM_RS13375 d72a7e90d180257cd43ecb5426fb66e2 488 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 38 53 1.7E-58 T 22-04-2016 SRM_RS13375 d72a7e90d180257cd43ecb5426fb66e2 488 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 304 311 1.7E-58 T 22-04-2016 SRM_RS13375 d72a7e90d180257cd43ecb5426fb66e2 488 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 262 276 1.7E-58 T 22-04-2016 SRM_RS02315 951623d8d1ca020a5448c932c5636d20 446 Pfam PF14269 Arylsulfotransferase (ASST) 130 403 2.6E-33 T 22-04-2016 SRM_RS02315 951623d8d1ca020a5448c932c5636d20 446 SUPERFAMILY SSF101898 287 407 2.25E-6 T 22-04-2016 SRM_RS02315 951623d8d1ca020a5448c932c5636d20 446 SUPERFAMILY SSF101898 125 248 2.25E-6 T 22-04-2016 SRM_RS02315 951623d8d1ca020a5448c932c5636d20 446 Gene3D G3DSA:2.120.10.30 132 407 7.7E-5 T 22-04-2016 IPR011042 Six-bladed beta-propeller, TolB-like SRM_RS05215 020d66585425957facb713e965e0da79 261 Pfam PF13302 Acetyltransferase (GNAT) domain 89 228 4.8E-25 T 22-04-2016 IPR000182 GNAT domain GO:0008080 SRM_RS05215 020d66585425957facb713e965e0da79 261 PANTHER PTHR13256 88 255 1.0E-35 T 22-04-2016 SRM_RS05215 020d66585425957facb713e965e0da79 261 SUPERFAMILY SSF55729 84 253 6.64E-40 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase SRM_RS05215 020d66585425957facb713e965e0da79 261 Gene3D G3DSA:3.40.630.30 87 257 3.0E-42 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase SRM_RS12885 1bf3d2db8f7641df626ceb4400d116b2 236 Pfam PF00486 Transcriptional regulatory protein, C terminal 164 234 8.4E-26 T 22-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 SRM_RS12885 1bf3d2db8f7641df626ceb4400d116b2 236 SMART SM00862 163 234 2.0E-26 T 22-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 SRM_RS12885 1bf3d2db8f7641df626ceb4400d116b2 236 Gene3D G3DSA:1.10.10.10 136 235 3.3E-29 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SRM_RS12885 1bf3d2db8f7641df626ceb4400d116b2 236 PANTHER PTHR26402 11 236 4.4E-86 T 22-04-2016 SRM_RS12885 1bf3d2db8f7641df626ceb4400d116b2 236 SUPERFAMILY SSF52172 9 144 3.98E-41 T 22-04-2016 IPR011006 CheY-like superfamily SRM_RS12885 1bf3d2db8f7641df626ceb4400d116b2 236 PANTHER PTHR26402:SF614 11 236 4.4E-86 T 22-04-2016 SRM_RS12885 1bf3d2db8f7641df626ceb4400d116b2 236 SMART SM00448 11 124 7.7E-41 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SRM_RS12885 1bf3d2db8f7641df626ceb4400d116b2 236 Gene3D G3DSA:3.40.50.2300 8 135 3.5E-43 T 22-04-2016 SRM_RS12885 1bf3d2db8f7641df626ceb4400d116b2 236 SUPERFAMILY SSF46894 135 234 1.05E-26 T 22-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 SRM_RS12885 1bf3d2db8f7641df626ceb4400d116b2 236 Pfam PF00072 Response regulator receiver domain 13 122 5.5E-30 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SRM_RS06745 cc30796236d641433971a3bdc91a37a7 293 PIRSF PIRSF019325 6 275 1.4E-87 T 22-04-2016 IPR016758 Glucose-6-phosphate isomerase, archaea/bacteria GO:0004347|GO:0005506 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|UniPathway: UPA00109 SRM_RS06745 cc30796236d641433971a3bdc91a37a7 293 SUPERFAMILY SSF51182 151 274 4.11E-16 T 22-04-2016 IPR011051 RmlC-like cupin domain SRM_RS06745 cc30796236d641433971a3bdc91a37a7 293 Gene3D G3DSA:2.60.120.10 113 289 5.7E-23 T 22-04-2016 IPR014710 RmlC-like jelly roll fold SRM_RS06745 cc30796236d641433971a3bdc91a37a7 293 Pfam PF07883 Cupin domain 195 272 3.8E-8 T 22-04-2016 IPR013096 Cupin 2, conserved barrel SRM_RS06400 c86eda1b4d13ce72ff532e2e9daf5cb7 448 PANTHER PTHR11785 2 436 1.0E-90 T 22-04-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 SRM_RS06400 c86eda1b4d13ce72ff532e2e9daf5cb7 448 PIRSF PIRSF006060 2 444 3.9E-66 T 22-04-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 SRM_RS06400 c86eda1b4d13ce72ff532e2e9daf5cb7 448 PANTHER PTHR11785:SF261 2 436 1.0E-90 T 22-04-2016 SRM_RS06400 c86eda1b4d13ce72ff532e2e9daf5cb7 448 Pfam PF13520 Amino acid permease 13 411 2.3E-41 T 22-04-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 SRM_RS07365 20af6d8f681d81d8a9f0dbbb9fa32ec2 320 Pfam PF01497 Periplasmic binding protein 48 275 8.9E-33 T 22-04-2016 IPR002491 ABC transporter periplasmic binding domain GO:0005488 SRM_RS07365 20af6d8f681d81d8a9f0dbbb9fa32ec2 320 Gene3D G3DSA:3.40.50.1980 45 162 3.2E-24 T 22-04-2016 SRM_RS07365 20af6d8f681d81d8a9f0dbbb9fa32ec2 320 Gene3D G3DSA:3.40.50.1980 170 299 8.4E-31 T 22-04-2016 SRM_RS07365 20af6d8f681d81d8a9f0dbbb9fa32ec2 320 SUPERFAMILY SSF53807 27 298 5.1E-58 T 22-04-2016 SRM_RS07365 20af6d8f681d81d8a9f0dbbb9fa32ec2 320 PANTHER PTHR30535 28 301 5.4E-61 T 22-04-2016 SRM_RS03450 417d0fa71a52082718fc428e08ca0357 542 SUPERFAMILY SSF53613 254 532 4.99E-62 T 22-04-2016 IPR029056 Ribokinase-like SRM_RS03450 417d0fa71a52082718fc428e08ca0357 542 Pfam PF01256 Carbohydrate kinase 275 529 2.4E-52 T 22-04-2016 IPR000631 ATP-dependent (S)-NAD(P)H-hydrate dehydratase GO:0052855 SRM_RS03450 417d0fa71a52082718fc428e08ca0357 542 TIGRFAM TIGR00197 yjeF_nterm: YjeF family N-terminal domain 17 234 2.6E-47 T 22-04-2016 IPR004443 YjeF N-terminal domain MetaCyc: PWY-6938 SRM_RS03450 417d0fa71a52082718fc428e08ca0357 542 PIRSF PIRSF017184 12 539 2.4E-124 T 22-04-2016 IPR030677 Bifunctional NAD(P)H-hydrate repair enzyme Nnr GO:0052855 MetaCyc: PWY-6938 SRM_RS03450 417d0fa71a52082718fc428e08ca0357 542 PANTHER PTHR12592 2 540 6.6E-122 T 22-04-2016 SRM_RS03450 417d0fa71a52082718fc428e08ca0357 542 Hamap MF_01965 ADP-dependent (S)-NAD(P)H-hydrate dehydratase [nnrD]. 251 536 21.038 T 22-04-2016 IPR000631 ATP-dependent (S)-NAD(P)H-hydrate dehydratase GO:0052855 SRM_RS03450 417d0fa71a52082718fc428e08ca0357 542 Gene3D G3DSA:3.40.50.10260 12 259 2.9E-69 T 22-04-2016 IPR004443 YjeF N-terminal domain MetaCyc: PWY-6938 SRM_RS03450 417d0fa71a52082718fc428e08ca0357 542 TIGRFAM TIGR00196 yjeF_cterm: YjeF family C-terminal domain 253 531 1.1E-57 T 22-04-2016 IPR000631 ATP-dependent (S)-NAD(P)H-hydrate dehydratase GO:0052855 SRM_RS03450 417d0fa71a52082718fc428e08ca0357 542 Gene3D G3DSA:3.40.1190.20 260 532 1.3E-72 T 22-04-2016 IPR029056 Ribokinase-like SRM_RS03450 417d0fa71a52082718fc428e08ca0357 542 PANTHER PTHR12592:SF0 2 540 6.6E-122 T 22-04-2016 SRM_RS03450 417d0fa71a52082718fc428e08ca0357 542 Hamap MF_01966 NAD(P)H-hydrate epimerase [nnrE]. 15 233 25.56 T 22-04-2016 IPR004443 YjeF N-terminal domain MetaCyc: PWY-6938 SRM_RS03450 417d0fa71a52082718fc428e08ca0357 542 SUPERFAMILY SSF64153 12 272 2.62E-61 T 22-04-2016 IPR004443 YjeF N-terminal domain MetaCyc: PWY-6938 SRM_RS03450 417d0fa71a52082718fc428e08ca0357 542 Pfam PF03853 YjeF-related protein N-terminus 36 212 6.3E-45 T 22-04-2016 IPR004443 YjeF N-terminal domain MetaCyc: PWY-6938 SRM_RS07760 c2217249807c1dd21ab0015319bc8793 224 Gene3D G3DSA:3.40.50.2020 14 221 8.5E-53 T 22-04-2016 IPR029057 Phosphoribosyltransferase-like SRM_RS07760 c2217249807c1dd21ab0015319bc8793 224 PANTHER PTHR19278 11 218 2.3E-51 T 22-04-2016 SRM_RS07760 c2217249807c1dd21ab0015319bc8793 224 Pfam PF00156 Phosphoribosyl transferase domain 50 161 4.5E-17 T 22-04-2016 IPR000836 Phosphoribosyltransferase domain GO:0009116 SRM_RS07760 c2217249807c1dd21ab0015319bc8793 224 SUPERFAMILY SSF53271 20 223 2.1E-45 T 22-04-2016 IPR029057 Phosphoribosyltransferase-like SRM_RS07760 c2217249807c1dd21ab0015319bc8793 224 Hamap MF_01208 Orotate phosphoribosyltransferase [pyrE]. 1 224 29.418 T 22-04-2016 IPR023031 Orotate phosphoribosyltransferase GO:0004588|GO:0006221 KEGG: 00240+2.4.2.10|KEGG: 00983+2.4.2.10|MetaCyc: PWY-5686|UniPathway: UPA00070 SRM_RS07760 c2217249807c1dd21ab0015319bc8793 224 TIGRFAM TIGR00336 pyrE: orotate phosphoribosyltransferase 22 186 2.0E-34 T 22-04-2016 IPR004467 Orotate phosphoribosyl transferase domain GO:0004588 KEGG: 00240+2.4.2.10|KEGG: 00983+2.4.2.10|MetaCyc: PWY-5686|UniPathway: UPA00070 SRM_RS01390 f79efe0cfb32498b9f027bf6e7fe03c2 864 Pfam PF07715 TonB-dependent Receptor Plug Domain 170 280 2.6E-9 T 22-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 SRM_RS01390 f79efe0cfb32498b9f027bf6e7fe03c2 864 Gene3D G3DSA:2.170.130.10 152 280 5.0E-16 T 22-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 SRM_RS01390 f79efe0cfb32498b9f027bf6e7fe03c2 864 Pfam PF13620 Carboxypeptidase regulatory-like domain 56 139 1.3E-11 T 22-04-2016 SRM_RS01390 f79efe0cfb32498b9f027bf6e7fe03c2 864 SUPERFAMILY SSF56935 145 864 1.21E-70 T 22-04-2016 SRM_RS01390 f79efe0cfb32498b9f027bf6e7fe03c2 864 SUPERFAMILY SSF49452 52 140 3.53E-10 T 22-04-2016 IPR013784 Carbohydrate-binding-like fold GO:0030246 SRM_RS01390 f79efe0cfb32498b9f027bf6e7fe03c2 864 Gene3D G3DSA:2.60.40.1120 68 151 1.7E-11 T 22-04-2016 IPR014766 Carboxypeptidase, regulatory domain SRM_RS01390 f79efe0cfb32498b9f027bf6e7fe03c2 864 Gene3D G3DSA:2.40.170.20 281 862 1.0E-53 T 22-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 SRM_RS01390 f79efe0cfb32498b9f027bf6e7fe03c2 864 Pfam PF00593 TonB dependent receptor 588 862 1.3E-21 T 22-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 SRM_RS06665 b2a7fa618758413fde4785d3fc133d3b 158 SUPERFAMILY SSF53271 11 152 6.25E-24 T 22-04-2016 IPR029057 Phosphoribosyltransferase-like SRM_RS06665 b2a7fa618758413fde4785d3fc133d3b 158 Gene3D G3DSA:3.40.50.2020 12 151 3.1E-25 T 22-04-2016 IPR029057 Phosphoribosyltransferase-like SRM_RS06665 b2a7fa618758413fde4785d3fc133d3b 158 PANTHER PTHR11907:SF9 7 153 2.6E-34 T 22-04-2016 SRM_RS06665 b2a7fa618758413fde4785d3fc133d3b 158 PANTHER PTHR11907 7 153 2.6E-34 T 22-04-2016 SRM_RS06325 964c96e91852cf2da490a0ecbcba3c70 402 Pfam PF04166 Pyridoxal phosphate biosynthetic protein PdxA 97 387 1.3E-106 T 22-04-2016 IPR005255 4-hydroxythreonine-4-phosphate dehydrogenase PdxA GO:0008615|GO:0050570|GO:0051287|GO:0055114 KEGG: 00630+1.1.1.26|KEGG: 00750+1.1.1.262|MetaCyc: PWY-7294|MetaCyc: PWY-7295|UniPathway: UPA00244 SRM_RS06325 964c96e91852cf2da490a0ecbcba3c70 402 Gene3D G3DSA:3.40.718.10 67 394 6.7E-122 T 22-04-2016 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 SRM_RS06325 964c96e91852cf2da490a0ecbcba3c70 402 SUPERFAMILY SSF53659 66 394 8.49E-103 T 22-04-2016 SRM_RS06325 964c96e91852cf2da490a0ecbcba3c70 402 PANTHER PTHR30004:SF6 63 397 2.4E-138 T 22-04-2016 SRM_RS06325 964c96e91852cf2da490a0ecbcba3c70 402 TIGRFAM TIGR00557 pdxA: 4-hydroxythreonine-4-phosphate dehydrogenase PdxA 68 390 2.2E-118 T 22-04-2016 IPR005255 4-hydroxythreonine-4-phosphate dehydrogenase PdxA GO:0008615|GO:0050570|GO:0051287|GO:0055114 KEGG: 00630+1.1.1.26|KEGG: 00750+1.1.1.262|MetaCyc: PWY-7294|MetaCyc: PWY-7295|UniPathway: UPA00244 SRM_RS06325 964c96e91852cf2da490a0ecbcba3c70 402 PANTHER PTHR30004 63 397 2.4E-138 T 22-04-2016 SRM_RS06325 964c96e91852cf2da490a0ecbcba3c70 402 Hamap MF_00536 4-hydroxythreonine-4-phosphate dehydrogenase [pdxA]. 65 391 33.948 T 22-04-2016 IPR005255 4-hydroxythreonine-4-phosphate dehydrogenase PdxA GO:0008615|GO:0050570|GO:0051287|GO:0055114 KEGG: 00630+1.1.1.26|KEGG: 00750+1.1.1.262|MetaCyc: PWY-7294|MetaCyc: PWY-7295|UniPathway: UPA00244 SRM_RS13265 3eb9f59f2e22c6d76128a2128a37377d 321 PANTHER PTHR24220:SF591 7 233 4.3E-88 T 22-04-2016 SRM_RS13265 3eb9f59f2e22c6d76128a2128a37377d 321 Gene3D G3DSA:3.40.50.300 3 234 9.3E-72 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SRM_RS13265 3eb9f59f2e22c6d76128a2128a37377d 321 SUPERFAMILY SSF52540 5 227 5.22E-63 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SRM_RS13265 3eb9f59f2e22c6d76128a2128a37377d 321 Pfam PF00005 ABC transporter 21 165 5.6E-32 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 SRM_RS13265 3eb9f59f2e22c6d76128a2128a37377d 321 SMART SM00382 30 212 2.7E-14 T 22-04-2016 IPR003593 AAA+ ATPase domain SRM_RS13265 3eb9f59f2e22c6d76128a2128a37377d 321 PANTHER PTHR24220 7 233 4.3E-88 T 22-04-2016 SRM_RS10790 5ed691a9684ff8c2f90fe28224c69d21 401 PANTHER PTHR13748 1 329 1.3E-180 T 22-04-2016 SRM_RS10790 5ed691a9684ff8c2f90fe28224c69d21 401 PANTHER PTHR13748 345 385 1.3E-180 T 22-04-2016 SRM_RS10790 5ed691a9684ff8c2f90fe28224c69d21 401 PANTHER PTHR13748:SF4 1 329 1.3E-180 T 22-04-2016 SRM_RS10790 5ed691a9684ff8c2f90fe28224c69d21 401 PANTHER PTHR13748:SF4 345 385 1.3E-180 T 22-04-2016 SRM_RS10790 5ed691a9684ff8c2f90fe28224c69d21 401 Pfam PF07683 Cobalamin synthesis protein cobW C-terminal domain 256 371 2.5E-29 T 22-04-2016 IPR011629 Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal SRM_RS10790 5ed691a9684ff8c2f90fe28224c69d21 401 Gene3D G3DSA:3.40.50.300 3 229 7.3E-73 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SRM_RS10790 5ed691a9684ff8c2f90fe28224c69d21 401 SUPERFAMILY SSF52540 3 313 2.79E-43 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SRM_RS10790 5ed691a9684ff8c2f90fe28224c69d21 401 Gene3D G3DSA:3.30.1220.10 244 371 4.2E-17 T 22-04-2016 IPR011629 Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal SRM_RS10790 5ed691a9684ff8c2f90fe28224c69d21 401 Pfam PF02492 CobW/HypB/UreG, nucleotide-binding domain 6 210 1.5E-56 T 22-04-2016 IPR003495 CobW/HypB/UreG, nucleotide-binding domain SRM_RS10790 5ed691a9684ff8c2f90fe28224c69d21 401 SMART SM00833 256 371 4.2E-51 T 22-04-2016 IPR011629 Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal SRM_RS15430 d6680ce5ad8edc0d7c05eaeb99ad6b2f 218 TIGRFAM TIGR00063 folE: GTP cyclohydrolase I 40 215 5.5E-75 T 22-04-2016 IPR001474 GTP cyclohydrolase I GO:0003934|GO:0005737|GO:0046654 KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|UniPathway: UPA00848 SRM_RS15430 d6680ce5ad8edc0d7c05eaeb99ad6b2f 218 PANTHER PTHR11109 23 215 3.0E-102 T 22-04-2016 IPR001474 GTP cyclohydrolase I GO:0003934|GO:0005737|GO:0046654 KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|UniPathway: UPA00848 SRM_RS15430 d6680ce5ad8edc0d7c05eaeb99ad6b2f 218 SUPERFAMILY SSF55620 27 216 2.67E-75 T 22-04-2016 SRM_RS15430 d6680ce5ad8edc0d7c05eaeb99ad6b2f 218 ProSitePatterns PS00860 GTP cyclohydrolase I signature 2. 144 154 - T 22-04-2016 IPR018234 GTP cyclohydrolase I, conserved site GO:0003934|GO:0005737|GO:0046654 KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|UniPathway: UPA00848 SRM_RS15430 d6680ce5ad8edc0d7c05eaeb99ad6b2f 218 Hamap MF_00223 GTP cyclohydrolase 1 [folE]. 35 216 38.955 T 22-04-2016 IPR001474 GTP cyclohydrolase I GO:0003934|GO:0005737|GO:0046654 KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|UniPathway: UPA00848 SRM_RS15430 d6680ce5ad8edc0d7c05eaeb99ad6b2f 218 Gene3D G3DSA:1.10.286.10 37 85 8.5E-20 T 22-04-2016 SRM_RS15430 d6680ce5ad8edc0d7c05eaeb99ad6b2f 218 Pfam PF01227 GTP cyclohydrolase I 40 215 2.7E-75 T 22-04-2016 IPR020602 GTP cyclohydrolase I domain KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|UniPathway: UPA00848 SRM_RS15430 d6680ce5ad8edc0d7c05eaeb99ad6b2f 218 Gene3D G3DSA:3.30.1130.10 89 216 7.6E-59 T 22-04-2016 SRM_RS15430 d6680ce5ad8edc0d7c05eaeb99ad6b2f 218 ProSitePatterns PS00859 GTP cyclohydrolase I signature 1. 96 112 - T 22-04-2016 IPR018234 GTP cyclohydrolase I, conserved site GO:0003934|GO:0005737|GO:0046654 KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|UniPathway: UPA00848 SRM_RS00760 77ebabd6c9a12ecc6dfed3ce56db4b3a 307 PANTHER PTHR24320 7 296 2.9E-120 T 22-04-2016 SRM_RS00760 77ebabd6c9a12ecc6dfed3ce56db4b3a 307 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 184 203 8.9E-5 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SRM_RS00760 77ebabd6c9a12ecc6dfed3ce56db4b3a 307 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 97 108 8.9E-5 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SRM_RS00760 77ebabd6c9a12ecc6dfed3ce56db4b3a 307 Pfam PF00106 short chain dehydrogenase 15 223 1.4E-32 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SRM_RS00760 77ebabd6c9a12ecc6dfed3ce56db4b3a 307 SUPERFAMILY SSF51735 11 267 4.31E-58 T 22-04-2016 IPR016040 NAD(P)-binding domain SRM_RS00760 77ebabd6c9a12ecc6dfed3ce56db4b3a 307 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 146 162 4.8E-20 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SRM_RS00760 77ebabd6c9a12ecc6dfed3ce56db4b3a 307 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 235 255 4.8E-20 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SRM_RS00760 77ebabd6c9a12ecc6dfed3ce56db4b3a 307 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 97 108 4.8E-20 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SRM_RS00760 77ebabd6c9a12ecc6dfed3ce56db4b3a 307 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 184 203 4.8E-20 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SRM_RS00760 77ebabd6c9a12ecc6dfed3ce56db4b3a 307 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 205 222 4.8E-20 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SRM_RS00760 77ebabd6c9a12ecc6dfed3ce56db4b3a 307 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 15 32 4.8E-20 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SRM_RS00760 77ebabd6c9a12ecc6dfed3ce56db4b3a 307 Gene3D G3DSA:3.40.50.720 3 267 6.1E-65 T 22-04-2016 IPR016040 NAD(P)-binding domain SRM_RS10690 054c31bf75e7bcc0665ddbc93f0ab406 910 Pfam PF00330 Aconitase family (aconitate hydratase) 79 573 1.9E-171 T 22-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 SRM_RS10690 054c31bf75e7bcc0665ddbc93f0ab406 910 SUPERFAMILY SSF53732 10 638 2.09E-216 T 22-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 SRM_RS10690 054c31bf75e7bcc0665ddbc93f0ab406 910 Gene3D G3DSA:3.30.499.10 374 398 2.4E-61 T 22-04-2016 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 SRM_RS10690 054c31bf75e7bcc0665ddbc93f0ab406 910 Gene3D G3DSA:3.30.499.10 430 586 2.4E-61 T 22-04-2016 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 SRM_RS10690 054c31bf75e7bcc0665ddbc93f0ab406 910 ProSitePatterns PS01244 Aconitase family signature 2. 504 517 - T 22-04-2016 IPR018136 Aconitase family, 4Fe-4S cluster binding site KEGG: 00290+4.2.1.33|UniPathway: UPA00048 SRM_RS10690 054c31bf75e7bcc0665ddbc93f0ab406 910 SUPERFAMILY SSF52016 642 902 7.46E-84 T 22-04-2016 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel SRM_RS10690 054c31bf75e7bcc0665ddbc93f0ab406 910 PANTHER PTHR11670 763 906 0.0 T 22-04-2016 IPR015937 Aconitase/isopropylmalate dehydratase GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 SRM_RS10690 054c31bf75e7bcc0665ddbc93f0ab406 910 PANTHER PTHR11670 678 723 0.0 T 22-04-2016 IPR015937 Aconitase/isopropylmalate dehydratase GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 SRM_RS10690 054c31bf75e7bcc0665ddbc93f0ab406 910 PANTHER PTHR11670 427 662 0.0 T 22-04-2016 IPR015937 Aconitase/isopropylmalate dehydratase GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 SRM_RS10690 054c31bf75e7bcc0665ddbc93f0ab406 910 PANTHER PTHR11670 10 398 0.0 T 22-04-2016 IPR015937 Aconitase/isopropylmalate dehydratase GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 SRM_RS10690 054c31bf75e7bcc0665ddbc93f0ab406 910 PANTHER PTHR11670:SF1 763 906 0.0 T 22-04-2016 SRM_RS10690 054c31bf75e7bcc0665ddbc93f0ab406 910 PANTHER PTHR11670:SF1 678 723 0.0 T 22-04-2016 SRM_RS10690 054c31bf75e7bcc0665ddbc93f0ab406 910 PANTHER PTHR11670:SF1 427 662 0.0 T 22-04-2016 SRM_RS10690 054c31bf75e7bcc0665ddbc93f0ab406 910 PANTHER PTHR11670:SF1 10 398 0.0 T 22-04-2016 SRM_RS10690 054c31bf75e7bcc0665ddbc93f0ab406 910 Gene3D G3DSA:3.20.19.10 648 901 4.7E-74 T 22-04-2016 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel SRM_RS10690 054c31bf75e7bcc0665ddbc93f0ab406 910 ProSitePatterns PS00450 Aconitase family signature 1. 438 454 - T 22-04-2016 IPR018136 Aconitase family, 4Fe-4S cluster binding site KEGG: 00290+4.2.1.33|UniPathway: UPA00048 SRM_RS10690 054c31bf75e7bcc0665ddbc93f0ab406 910 TIGRFAM TIGR01341 aconitase_1: aconitate hydratase 1 26 903 0.0 T 22-04-2016 IPR006249 Aconitase/Iron-responsive element-binding protein 2 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00720+4.2.1.3 SRM_RS10690 054c31bf75e7bcc0665ddbc93f0ab406 910 PRINTS PR00415 Aconitase family signature 504 517 2.3E-40 T 22-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 SRM_RS10690 054c31bf75e7bcc0665ddbc93f0ab406 910 PRINTS PR00415 Aconitase family signature 442 453 2.3E-40 T 22-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 SRM_RS10690 054c31bf75e7bcc0665ddbc93f0ab406 910 PRINTS PR00415 Aconitase family signature 377 391 2.3E-40 T 22-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 SRM_RS10690 054c31bf75e7bcc0665ddbc93f0ab406 910 PRINTS PR00415 Aconitase family signature 149 162 2.3E-40 T 22-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 SRM_RS10690 054c31bf75e7bcc0665ddbc93f0ab406 910 PRINTS PR00415 Aconitase family signature 207 220 2.3E-40 T 22-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 SRM_RS10690 054c31bf75e7bcc0665ddbc93f0ab406 910 PRINTS PR00415 Aconitase family signature 283 296 2.3E-40 T 22-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 SRM_RS10690 054c31bf75e7bcc0665ddbc93f0ab406 910 PRINTS PR00415 Aconitase family signature 297 310 2.3E-40 T 22-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 SRM_RS10690 054c31bf75e7bcc0665ddbc93f0ab406 910 PRINTS PR00415 Aconitase family signature 173 181 2.3E-40 T 22-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 SRM_RS10690 054c31bf75e7bcc0665ddbc93f0ab406 910 PRINTS PR00415 Aconitase family signature 221 236 2.3E-40 T 22-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 SRM_RS10690 054c31bf75e7bcc0665ddbc93f0ab406 910 Pfam PF00694 Aconitase C-terminal domain 703 831 4.5E-43 T 22-04-2016 IPR000573 Aconitase A/isopropylmalate dehydratase small subunit, swivel domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 SRM_RS10690 054c31bf75e7bcc0665ddbc93f0ab406 910 Gene3D G3DSA:3.30.499.10 27 253 3.4E-72 T 22-04-2016 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 SRM_RS10690 054c31bf75e7bcc0665ddbc93f0ab406 910 Gene3D G3DSA:3.40.1060.10 254 372 1.5E-34 T 22-04-2016 IPR015932 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 2 GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 SRM_RS03375 dafb219fd7563fcddeac5ffeb7f9c31d 142 SUPERFAMILY SSF52304 2 140 1.44E-56 T 22-04-2016 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707|UniPathway: UPA00053 SRM_RS03375 dafb219fd7563fcddeac5ffeb7f9c31d 142 PANTHER PTHR21272 1 140 5.6E-73 T 22-04-2016 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707|UniPathway: UPA00053 SRM_RS03375 dafb219fd7563fcddeac5ffeb7f9c31d 142 ProSitePatterns PS01029 Dehydroquinase class II signature. 6 23 - T 22-04-2016 IPR018509 Dehydroquinase, class II, conserved site GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707|UniPathway: UPA00053 SRM_RS03375 dafb219fd7563fcddeac5ffeb7f9c31d 142 Hamap MF_00169 3-dehydroquinate dehydratase [aroQ]. 1 142 62.337 T 22-04-2016 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707|UniPathway: UPA00053 SRM_RS03375 dafb219fd7563fcddeac5ffeb7f9c31d 142 Pfam PF01220 Dehydroquinase class II 3 137 2.3E-54 T 22-04-2016 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707|UniPathway: UPA00053 SRM_RS03375 dafb219fd7563fcddeac5ffeb7f9c31d 142 PIRSF PIRSF001399 1 142 1.1E-54 T 22-04-2016 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707|UniPathway: UPA00053 SRM_RS03375 dafb219fd7563fcddeac5ffeb7f9c31d 142 Gene3D G3DSA:3.40.50.9100 3 139 3.8E-58 T 22-04-2016 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707|UniPathway: UPA00053 SRM_RS03375 dafb219fd7563fcddeac5ffeb7f9c31d 142 ProDom PD004527 LYASE II 3-DEHYDROQUINATE BIOSYNTHESIS DEHYDRATASE TYPE 3-DEHYDROQUINASE DHQASE AMINO AROMATIC 17 138 9.0E-36 T 22-04-2016 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707|UniPathway: UPA00053 SRM_RS03375 dafb219fd7563fcddeac5ffeb7f9c31d 142 TIGRFAM TIGR01088 aroQ: 3-dehydroquinate dehydratase, type II 3 139 8.3E-55 T 22-04-2016 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707|UniPathway: UPA00053 SRM_RS12905 725458390e7ccc3dd228045dace39b7f 293 ProSitePatterns PS00211 ABC transporters family signature. 190 204 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 SRM_RS12905 725458390e7ccc3dd228045dace39b7f 293 Gene3D G3DSA:3.40.50.300 41 285 1.7E-68 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SRM_RS12905 725458390e7ccc3dd228045dace39b7f 293 TIGRFAM TIGR00972 3a0107s01c2: phosphate ABC transporter, ATP-binding protein 49 293 2.7E-118 T 22-04-2016 IPR005670 Phosphate transport system permease protein 1 GO:0005315|GO:0016020|GO:0035435 SRM_RS12905 725458390e7ccc3dd228045dace39b7f 293 Pfam PF00005 ABC transporter 64 217 2.2E-30 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 SRM_RS12905 725458390e7ccc3dd228045dace39b7f 293 PANTHER PTHR24220 50 291 6.4E-134 T 22-04-2016 SRM_RS12905 725458390e7ccc3dd228045dace39b7f 293 SMART SM00382 73 273 1.8E-13 T 22-04-2016 IPR003593 AAA+ ATPase domain SRM_RS12905 725458390e7ccc3dd228045dace39b7f 293 SUPERFAMILY SSF52540 43 284 1.42E-58 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SRM_RS12905 725458390e7ccc3dd228045dace39b7f 293 PANTHER PTHR24220:SF585 50 291 6.4E-134 T 22-04-2016 SRM_RS09840 2cb5da846ceaaf537a333d4b1a8b5a77 174 Pfam PF04542 Sigma-70 region 2 11 77 6.1E-18 T 22-04-2016 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 SRM_RS09840 2cb5da846ceaaf537a333d4b1a8b5a77 174 Gene3D G3DSA:1.10.1740.10 6 97 1.8E-21 T 22-04-2016 SRM_RS09840 2cb5da846ceaaf537a333d4b1a8b5a77 174 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 6 165 2.0E-35 T 22-04-2016 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 SRM_RS09840 2cb5da846ceaaf537a333d4b1a8b5a77 174 PANTHER PTHR30173 6 171 6.2E-44 T 22-04-2016 SRM_RS09840 2cb5da846ceaaf537a333d4b1a8b5a77 174 SUPERFAMILY SSF88659 102 166 5.45E-17 T 22-04-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 SRM_RS09840 2cb5da846ceaaf537a333d4b1a8b5a77 174 SUPERFAMILY SSF88946 6 86 1.33E-21 T 22-04-2016 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 SRM_RS09840 2cb5da846ceaaf537a333d4b1a8b5a77 174 Gene3D G3DSA:1.10.10.10 104 166 4.5E-21 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SRM_RS09840 2cb5da846ceaaf537a333d4b1a8b5a77 174 Pfam PF08281 Sigma-70, region 4 111 161 1.1E-16 T 22-04-2016 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 SRM_RS04600 709e8d66aa97ab0c157ad628d30dc731 337 PANTHER PTHR31964 164 333 2.1E-31 T 22-04-2016 SRM_RS04600 709e8d66aa97ab0c157ad628d30dc731 337 PANTHER PTHR31964:SF26 164 333 2.1E-31 T 22-04-2016 SRM_RS04600 709e8d66aa97ab0c157ad628d30dc731 337 PRINTS PR01438 Universal stress protein signature 183 201 9.3E-16 T 22-04-2016 IPR006015 Universal stress protein A SRM_RS04600 709e8d66aa97ab0c157ad628d30dc731 337 PRINTS PR01438 Universal stress protein signature 300 322 9.3E-16 T 22-04-2016 IPR006015 Universal stress protein A SRM_RS04600 709e8d66aa97ab0c157ad628d30dc731 337 PRINTS PR01438 Universal stress protein signature 282 294 9.3E-16 T 22-04-2016 IPR006015 Universal stress protein A SRM_RS04600 709e8d66aa97ab0c157ad628d30dc731 337 Pfam PF00582 Universal stress protein family 183 322 1.0E-33 T 22-04-2016 IPR006016 UspA GO:0006950 SRM_RS04600 709e8d66aa97ab0c157ad628d30dc731 337 Pfam PF00582 Universal stress protein family 29 170 1.5E-28 T 22-04-2016 IPR006016 UspA GO:0006950 SRM_RS04600 709e8d66aa97ab0c157ad628d30dc731 337 Gene3D G3DSA:3.40.50.620 24 170 2.0E-32 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold SRM_RS04600 709e8d66aa97ab0c157ad628d30dc731 337 SUPERFAMILY SSF52402 183 322 2.76E-37 T 22-04-2016 SRM_RS04600 709e8d66aa97ab0c157ad628d30dc731 337 Gene3D G3DSA:3.40.50.620 183 322 1.4E-39 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold SRM_RS04600 709e8d66aa97ab0c157ad628d30dc731 337 SUPERFAMILY SSF52402 29 170 4.27E-30 T 22-04-2016 SRM_RS01665 4e5efb593ccf6cb80e9f1831bece6481 756 Gene3D G3DSA:2.170.130.10 106 219 6.0E-14 T 22-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 SRM_RS01665 4e5efb593ccf6cb80e9f1831bece6481 756 Pfam PF13715 CarboxypepD_reg-like domain 22 109 1.6E-22 T 22-04-2016 SRM_RS01665 4e5efb593ccf6cb80e9f1831bece6481 756 PANTHER PTHR30069 21 250 2.4E-39 T 22-04-2016 SRM_RS01665 4e5efb593ccf6cb80e9f1831bece6481 756 SUPERFAMILY SSF49464 20 107 2.55E-18 T 22-04-2016 IPR008969 Carboxypeptidase-like, regulatory domain SRM_RS01665 4e5efb593ccf6cb80e9f1831bece6481 756 SUPERFAMILY SSF56935 105 735 3.66E-76 T 22-04-2016 SRM_RS01665 4e5efb593ccf6cb80e9f1831bece6481 756 Gene3D G3DSA:2.60.40.1120 22 99 5.4E-19 T 22-04-2016 IPR014766 Carboxypeptidase, regulatory domain SRM_RS01665 4e5efb593ccf6cb80e9f1831bece6481 756 Pfam PF07715 TonB-dependent Receptor Plug Domain 138 219 1.8E-13 T 22-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 SRM_RS01665 4e5efb593ccf6cb80e9f1831bece6481 756 PANTHER PTHR30069:SF1 21 250 2.4E-39 T 22-04-2016 SRM_RS01665 4e5efb593ccf6cb80e9f1831bece6481 756 Gene3D G3DSA:2.40.170.20 220 697 2.3E-39 T 22-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 SRM_RS12285 4bffba57f1bab0601b7314e308a9893d 324 SUPERFAMILY SSF47364 17 94 1.57E-18 T 22-04-2016 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: REACT_15380 SRM_RS12285 4bffba57f1bab0601b7314e308a9893d 324 Pfam PF00448 SRP54-type protein, GTPase domain 119 319 6.7E-76 T 22-04-2016 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: REACT_15380 SRM_RS12285 4bffba57f1bab0601b7314e308a9893d 324 TIGRFAM TIGR00064 ftsY: signal recognition particle-docking protein FtsY 45 319 1.9E-106 T 22-04-2016 IPR004390 Signal-recognition particle receptor FtsY GO:0006614 SRM_RS12285 4bffba57f1bab0601b7314e308a9893d 324 SMART SM00962 119 320 1.3E-114 T 22-04-2016 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: REACT_15380 SRM_RS12285 4bffba57f1bab0601b7314e308a9893d 324 Gene3D G3DSA:3.40.50.300 115 320 1.1E-79 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SRM_RS12285 4bffba57f1bab0601b7314e308a9893d 324 SMART SM00382 118 314 1.0E-8 T 22-04-2016 IPR003593 AAA+ ATPase domain SRM_RS12285 4bffba57f1bab0601b7314e308a9893d 324 SUPERFAMILY SSF52540 115 319 1.81E-50 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SRM_RS12285 4bffba57f1bab0601b7314e308a9893d 324 PANTHER PTHR11564:SF16 9 320 6.8E-125 T 22-04-2016 SRM_RS12285 4bffba57f1bab0601b7314e308a9893d 324 Gene3D G3DSA:1.20.120.140 21 101 4.0E-26 T 22-04-2016 SRM_RS12285 4bffba57f1bab0601b7314e308a9893d 324 Hamap MF_00920 Signal recognition particle receptor FtsY [ftsY]. 43 320 59.419 T 22-04-2016 IPR004390 Signal-recognition particle receptor FtsY GO:0006614 SRM_RS12285 4bffba57f1bab0601b7314e308a9893d 324 Pfam PF02881 SRP54-type protein, helical bundle domain 31 96 2.5E-12 T 22-04-2016 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: REACT_15380 SRM_RS12285 4bffba57f1bab0601b7314e308a9893d 324 SMART SM00963 19 100 3.4E-20 T 22-04-2016 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: REACT_15380 SRM_RS12285 4bffba57f1bab0601b7314e308a9893d 324 ProSitePatterns PS00300 SRP54-type proteins GTP-binding domain signature. 293 306 - T 22-04-2016 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: REACT_15380 SRM_RS12285 4bffba57f1bab0601b7314e308a9893d 324 PANTHER PTHR11564 9 320 6.8E-125 T 22-04-2016 SRM_RS13860 37f3b3d49ae6229c40c1b1dbce9ef7a5 590 PRINTS PR00998 Carboxypeptidase Taq (M32) metallopeptidase signature 491 512 5.7E-69 T 22-04-2016 IPR001333 Peptidase M32, carboxypeptidase Taq metallopeptidase GO:0004181|GO:0006508 SRM_RS13860 37f3b3d49ae6229c40c1b1dbce9ef7a5 590 PRINTS PR00998 Carboxypeptidase Taq (M32) metallopeptidase signature 238 258 5.7E-69 T 22-04-2016 IPR001333 Peptidase M32, carboxypeptidase Taq metallopeptidase GO:0004181|GO:0006508 SRM_RS13860 37f3b3d49ae6229c40c1b1dbce9ef7a5 590 PRINTS PR00998 Carboxypeptidase Taq (M32) metallopeptidase signature 422 441 5.7E-69 T 22-04-2016 IPR001333 Peptidase M32, carboxypeptidase Taq metallopeptidase GO:0004181|GO:0006508 SRM_RS13860 37f3b3d49ae6229c40c1b1dbce9ef7a5 590 PRINTS PR00998 Carboxypeptidase Taq (M32) metallopeptidase signature 468 485 5.7E-69 T 22-04-2016 IPR001333 Peptidase M32, carboxypeptidase Taq metallopeptidase GO:0004181|GO:0006508 SRM_RS13860 37f3b3d49ae6229c40c1b1dbce9ef7a5 590 PRINTS PR00998 Carboxypeptidase Taq (M32) metallopeptidase signature 334 353 5.7E-69 T 22-04-2016 IPR001333 Peptidase M32, carboxypeptidase Taq metallopeptidase GO:0004181|GO:0006508 SRM_RS13860 37f3b3d49ae6229c40c1b1dbce9ef7a5 590 PRINTS PR00998 Carboxypeptidase Taq (M32) metallopeptidase signature 354 373 5.7E-69 T 22-04-2016 IPR001333 Peptidase M32, carboxypeptidase Taq metallopeptidase GO:0004181|GO:0006508 SRM_RS13860 37f3b3d49ae6229c40c1b1dbce9ef7a5 590 PRINTS PR00998 Carboxypeptidase Taq (M32) metallopeptidase signature 317 333 5.7E-69 T 22-04-2016 IPR001333 Peptidase M32, carboxypeptidase Taq metallopeptidase GO:0004181|GO:0006508 SRM_RS13860 37f3b3d49ae6229c40c1b1dbce9ef7a5 590 PRINTS PR00998 Carboxypeptidase Taq (M32) metallopeptidase signature 381 397 5.7E-69 T 22-04-2016 IPR001333 Peptidase M32, carboxypeptidase Taq metallopeptidase GO:0004181|GO:0006508 SRM_RS13860 37f3b3d49ae6229c40c1b1dbce9ef7a5 590 PRINTS PR00998 Carboxypeptidase Taq (M32) metallopeptidase signature 536 554 5.7E-69 T 22-04-2016 IPR001333 Peptidase M32, carboxypeptidase Taq metallopeptidase GO:0004181|GO:0006508 SRM_RS13860 37f3b3d49ae6229c40c1b1dbce9ef7a5 590 SUPERFAMILY SSF55486 96 584 4.27E-115 T 22-04-2016 SRM_RS13860 37f3b3d49ae6229c40c1b1dbce9ef7a5 590 PANTHER PTHR34217 89 590 3.5E-233 T 22-04-2016 SRM_RS13860 37f3b3d49ae6229c40c1b1dbce9ef7a5 590 Pfam PF02074 Carboxypeptidase Taq (M32) metallopeptidase 105 583 4.5E-114 T 22-04-2016 IPR001333 Peptidase M32, carboxypeptidase Taq metallopeptidase GO:0004181|GO:0006508 SRM_RS13860 37f3b3d49ae6229c40c1b1dbce9ef7a5 590 PANTHER PTHR34217:SF1 89 590 3.5E-233 T 22-04-2016 SRM_RS13470 b51ba374772c98894acc7587fd3b0fac 652 ProSitePatterns PS00177 DNA topoisomerase II signature. 437 445 - T 22-04-2016 IPR018522 DNA topoisomerase, type IIA, conserved site GO:0003677|GO:0003918|GO:0005524|GO:0006265 SRM_RS13470 b51ba374772c98894acc7587fd3b0fac 652 SMART SM00433 44 646 0.0 T 22-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 SRM_RS13470 b51ba374772c98894acc7587fd3b0fac 652 Pfam PF01751 Toprim domain 434 546 4.7E-17 T 22-04-2016 IPR006171 Toprim domain SRM_RS13470 b51ba374772c98894acc7587fd3b0fac 652 Gene3D G3DSA:3.40.50.670 419 635 1.6E-92 T 22-04-2016 IPR013759 DNA topoisomerase, type IIA, central domain GO:0003677|GO:0003918|GO:0005524|GO:0006265 SRM_RS13470 b51ba374772c98894acc7587fd3b0fac 652 SUPERFAMILY SSF54211 236 406 4.55E-58 T 22-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold SRM_RS13470 b51ba374772c98894acc7587fd3b0fac 652 TIGRFAM TIGR01059 gyrB: DNA gyrase, B subunit 15 649 5.3E-290 T 22-04-2016 IPR011557 DNA gyrase, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 SRM_RS13470 b51ba374772c98894acc7587fd3b0fac 652 Pfam PF00204 DNA gyrase B 236 405 1.5E-61 T 22-04-2016 IPR013506 DNA topoisomerase, type IIA, subunit B, domain 2 GO:0003677|GO:0003918|GO:0005524|GO:0006265 SRM_RS13470 b51ba374772c98894acc7587fd3b0fac 652 Gene3D G3DSA:3.30.230.10 235 406 1.8E-69 T 22-04-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup SRM_RS13470 b51ba374772c98894acc7587fd3b0fac 652 SMART SM00387 40 187 1.1E-27 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SRM_RS13470 b51ba374772c98894acc7587fd3b0fac 652 PRINTS PR00418 DNA topoisomerase II family signature 435 449 3.1E-70 T 22-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 SRM_RS13470 b51ba374772c98894acc7587fd3b0fac 652 PRINTS PR00418 DNA topoisomerase II family signature 44 59 3.1E-70 T 22-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 SRM_RS13470 b51ba374772c98894acc7587fd3b0fac 652 PRINTS PR00418 DNA topoisomerase II family signature 585 601 3.1E-70 T 22-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 SRM_RS13470 b51ba374772c98894acc7587fd3b0fac 652 PRINTS PR00418 DNA topoisomerase II family signature 79 92 3.1E-70 T 22-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 SRM_RS13470 b51ba374772c98894acc7587fd3b0fac 652 PRINTS PR00418 DNA topoisomerase II family signature 522 539 3.1E-70 T 22-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 SRM_RS13470 b51ba374772c98894acc7587fd3b0fac 652 PRINTS PR00418 DNA topoisomerase II family signature 542 554 3.1E-70 T 22-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 SRM_RS13470 b51ba374772c98894acc7587fd3b0fac 652 PRINTS PR00418 DNA topoisomerase II family signature 283 296 3.1E-70 T 22-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 SRM_RS13470 b51ba374772c98894acc7587fd3b0fac 652 PRINTS PR00418 DNA topoisomerase II family signature 504 520 3.1E-70 T 22-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 SRM_RS13470 b51ba374772c98894acc7587fd3b0fac 652 PRINTS PR00418 DNA topoisomerase II family signature 122 136 3.1E-70 T 22-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 SRM_RS13470 b51ba374772c98894acc7587fd3b0fac 652 Gene3D G3DSA:3.30.565.10 15 224 1.7E-89 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SRM_RS13470 b51ba374772c98894acc7587fd3b0fac 652 Hamap MF_01898 DNA gyrase subunit B [gyrB]. 12 652 86.485 T 22-04-2016 IPR011557 DNA gyrase, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 SRM_RS13470 b51ba374772c98894acc7587fd3b0fac 652 SUPERFAMILY SSF55874 15 223 3.14E-70 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SRM_RS13470 b51ba374772c98894acc7587fd3b0fac 652 PANTHER PTHR10169 13 647 1.2E-276 T 22-04-2016 SRM_RS13470 b51ba374772c98894acc7587fd3b0fac 652 PRINTS PR01159 DNA gyrase subunit B signature 606 618 1.2E-65 T 22-04-2016 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 SRM_RS13470 b51ba374772c98894acc7587fd3b0fac 652 PRINTS PR01159 DNA gyrase subunit B signature 15 25 1.2E-65 T 22-04-2016 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 SRM_RS13470 b51ba374772c98894acc7587fd3b0fac 652 PRINTS PR01159 DNA gyrase subunit B signature 622 638 1.2E-65 T 22-04-2016 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 SRM_RS13470 b51ba374772c98894acc7587fd3b0fac 652 PRINTS PR01159 DNA gyrase subunit B signature 327 343 1.2E-65 T 22-04-2016 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 SRM_RS13470 b51ba374772c98894acc7587fd3b0fac 652 PRINTS PR01159 DNA gyrase subunit B signature 192 207 1.2E-65 T 22-04-2016 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 SRM_RS13470 b51ba374772c98894acc7587fd3b0fac 652 PRINTS PR01159 DNA gyrase subunit B signature 375 389 1.2E-65 T 22-04-2016 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 SRM_RS13470 b51ba374772c98894acc7587fd3b0fac 652 PRINTS PR01159 DNA gyrase subunit B signature 485 494 1.2E-65 T 22-04-2016 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 SRM_RS13470 b51ba374772c98894acc7587fd3b0fac 652 PRINTS PR01159 DNA gyrase subunit B signature 207 220 1.2E-65 T 22-04-2016 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 SRM_RS13470 b51ba374772c98894acc7587fd3b0fac 652 PRINTS PR01159 DNA gyrase subunit B signature 235 257 1.2E-65 T 22-04-2016 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 SRM_RS13470 b51ba374772c98894acc7587fd3b0fac 652 PRINTS PR01159 DNA gyrase subunit B signature 389 409 1.2E-65 T 22-04-2016 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 SRM_RS13470 b51ba374772c98894acc7587fd3b0fac 652 Pfam PF00986 DNA gyrase B subunit, carboxyl terminus 582 642 1.9E-29 T 22-04-2016 IPR002288 DNA gyrase B subunit, C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 SRM_RS13470 b51ba374772c98894acc7587fd3b0fac 652 SUPERFAMILY SSF56719 409 646 9.68E-87 T 22-04-2016 IPR013760 DNA topoisomerase, type IIA-like domain GO:0003918|GO:0005524 SRM_RS13470 b51ba374772c98894acc7587fd3b0fac 652 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 43 185 2.8E-24 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SRM_RS15315 dc45786b2bee52cdbcdd7ce4409cbcdd 334 Pfam PF01548 Transposase 31 163 1.0E-24 T 22-04-2016 IPR002525 Transposase, IS111A/IS1328/IS1533, N-terminal GO:0003677|GO:0004803|GO:0006313 SRM_RS15315 dc45786b2bee52cdbcdd7ce4409cbcdd 334 Pfam PF02371 Transposase IS116/IS110/IS902 family 205 290 7.5E-27 T 22-04-2016 IPR003346 Transposase, IS116/IS110/IS902 GO:0003677|GO:0004803|GO:0006313 SRM_RS15315 dc45786b2bee52cdbcdd7ce4409cbcdd 334 PANTHER PTHR33055:SF3 11 329 7.3E-64 T 22-04-2016 SRM_RS15315 dc45786b2bee52cdbcdd7ce4409cbcdd 334 PANTHER PTHR33055 11 329 7.3E-64 T 22-04-2016 SRM_RS07745 dc45786b2bee52cdbcdd7ce4409cbcdd 334 Pfam PF01548 Transposase 31 163 1.0E-24 T 22-04-2016 IPR002525 Transposase, IS111A/IS1328/IS1533, N-terminal GO:0003677|GO:0004803|GO:0006313 SRM_RS07745 dc45786b2bee52cdbcdd7ce4409cbcdd 334 Pfam PF02371 Transposase IS116/IS110/IS902 family 205 290 7.5E-27 T 22-04-2016 IPR003346 Transposase, IS116/IS110/IS902 GO:0003677|GO:0004803|GO:0006313 SRM_RS07745 dc45786b2bee52cdbcdd7ce4409cbcdd 334 PANTHER PTHR33055:SF3 11 329 7.3E-64 T 22-04-2016 SRM_RS07745 dc45786b2bee52cdbcdd7ce4409cbcdd 334 PANTHER PTHR33055 11 329 7.3E-64 T 22-04-2016 SRM_RS03190 196bcaa61c4f09326db70d659c020af0 1080 TIGRFAM TIGR00392 ileS: isoleucine--tRNA ligase 7 862 2.0E-288 T 22-04-2016 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5|Reactome: REACT_71 SRM_RS03190 196bcaa61c4f09326db70d659c020af0 1080 Gene3D G3DSA:3.40.50.620 399 645 1.3E-144 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold SRM_RS03190 196bcaa61c4f09326db70d659c020af0 1080 Gene3D G3DSA:3.40.50.620 6 195 1.3E-144 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold SRM_RS03190 196bcaa61c4f09326db70d659c020af0 1080 SUPERFAMILY SSF47323 661 917 2.99E-49 T 22-04-2016 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 SRM_RS03190 196bcaa61c4f09326db70d659c020af0 1080 Pfam PF08264 Anticodon-binding domain of tRNA 693 855 5.4E-23 T 22-04-2016 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding GO:0000166|GO:0006418 Reactome: REACT_71 SRM_RS03190 196bcaa61c4f09326db70d659c020af0 1080 PANTHER PTHR11946:SF87 1 243 0.0 T 22-04-2016 SRM_RS03190 196bcaa61c4f09326db70d659c020af0 1080 PANTHER PTHR11946:SF87 763 960 0.0 T 22-04-2016 SRM_RS03190 196bcaa61c4f09326db70d659c020af0 1080 PANTHER PTHR11946:SF87 268 488 0.0 T 22-04-2016 SRM_RS03190 196bcaa61c4f09326db70d659c020af0 1080 PANTHER PTHR11946:SF87 506 745 0.0 T 22-04-2016 SRM_RS03190 196bcaa61c4f09326db70d659c020af0 1080 SUPERFAMILY SSF50677 201 396 1.26E-49 T 22-04-2016 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 Reactome: REACT_71 SRM_RS03190 196bcaa61c4f09326db70d659c020af0 1080 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 394 409 6.9E-26 T 22-04-2016 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5|Reactome: REACT_71 SRM_RS03190 196bcaa61c4f09326db70d659c020af0 1080 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 525 538 6.9E-26 T 22-04-2016 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5|Reactome: REACT_71 SRM_RS03190 196bcaa61c4f09326db70d659c020af0 1080 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 42 53 6.9E-26 T 22-04-2016 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5|Reactome: REACT_71 SRM_RS03190 196bcaa61c4f09326db70d659c020af0 1080 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 565 574 6.9E-26 T 22-04-2016 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5|Reactome: REACT_71 SRM_RS03190 196bcaa61c4f09326db70d659c020af0 1080 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 222 245 6.9E-26 T 22-04-2016 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5|Reactome: REACT_71 SRM_RS03190 196bcaa61c4f09326db70d659c020af0 1080 Gene3D G3DSA:3.90.740.10 203 382 1.9E-55 T 22-04-2016 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 Reactome: REACT_71 SRM_RS03190 196bcaa61c4f09326db70d659c020af0 1080 PANTHER PTHR11946 1 243 0.0 T 22-04-2016 SRM_RS03190 196bcaa61c4f09326db70d659c020af0 1080 PANTHER PTHR11946 763 960 0.0 T 22-04-2016 SRM_RS03190 196bcaa61c4f09326db70d659c020af0 1080 PANTHER PTHR11946 268 488 0.0 T 22-04-2016 SRM_RS03190 196bcaa61c4f09326db70d659c020af0 1080 PANTHER PTHR11946 506 745 0.0 T 22-04-2016 SRM_RS03190 196bcaa61c4f09326db70d659c020af0 1080 Hamap MF_02003 Isoleucine--tRNA ligase [ileS]. 2 1066 13.853 T 22-04-2016 IPR023586 Isoleucine-tRNA ligase, type 2 GO:0004822 KEGG: 00970+6.1.1.5 SRM_RS03190 196bcaa61c4f09326db70d659c020af0 1080 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 19 645 4.5E-184 T 22-04-2016 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 SRM_RS03190 196bcaa61c4f09326db70d659c020af0 1080 Gene3D G3DSA:1.10.730.10 652 848 6.1E-44 T 22-04-2016 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 SRM_RS03190 196bcaa61c4f09326db70d659c020af0 1080 SUPERFAMILY SSF52374 4 199 5.63E-129 T 22-04-2016 SRM_RS03190 196bcaa61c4f09326db70d659c020af0 1080 SUPERFAMILY SSF52374 396 654 5.63E-129 T 22-04-2016 SRM_RS13485 864f59d8f16ff7067863ce108c62c495 219 PANTHER PTHR11911 1 121 4.7E-18 T 22-04-2016 SRM_RS13485 864f59d8f16ff7067863ce108c62c495 219 Pfam PF00571 CBS domain 13 56 7.6E-9 T 22-04-2016 IPR000644 CBS domain SRM_RS13485 864f59d8f16ff7067863ce108c62c495 219 Pfam PF00571 CBS domain 70 115 1.7E-7 T 22-04-2016 IPR000644 CBS domain SRM_RS13485 864f59d8f16ff7067863ce108c62c495 219 SUPERFAMILY SSF54631 1 116 1.25E-24 T 22-04-2016 SRM_RS13485 864f59d8f16ff7067863ce108c62c495 219 SMART SM00116 70 118 0.023 T 22-04-2016 IPR000644 CBS domain SRM_RS13485 864f59d8f16ff7067863ce108c62c495 219 SMART SM00116 10 58 2.7E-4 T 22-04-2016 IPR000644 CBS domain SRM_RS13485 864f59d8f16ff7067863ce108c62c495 219 Gene3D G3DSA:3.10.580.10 1 119 1.7E-23 T 22-04-2016 SRM_RS07355 305f217862a47093f6eddac2a9cf7d93 355 PANTHER PTHR12001 32 355 2.3E-95 T 22-04-2016 IPR017446 Polyprenyl synthetase-related SRM_RS07355 305f217862a47093f6eddac2a9cf7d93 355 Gene3D G3DSA:1.10.600.10 35 354 5.8E-90 T 22-04-2016 IPR008949 Isoprenoid synthase domain SRM_RS07355 305f217862a47093f6eddac2a9cf7d93 355 Pfam PF00348 Polyprenyl synthetase 63 304 5.2E-62 T 22-04-2016 IPR000092 Polyprenyl synthetase GO:0008299 SRM_RS07355 305f217862a47093f6eddac2a9cf7d93 355 ProSitePatterns PS00723 Polyprenyl synthases signature 1. 114 128 - T 22-04-2016 IPR000092 Polyprenyl synthetase GO:0008299 SRM_RS07355 305f217862a47093f6eddac2a9cf7d93 355 ProSitePatterns PS00444 Polyprenyl synthases signature 2. 236 248 - T 22-04-2016 IPR000092 Polyprenyl synthetase GO:0008299 SRM_RS07355 305f217862a47093f6eddac2a9cf7d93 355 SUPERFAMILY SSF48576 32 354 4.86E-82 T 22-04-2016 IPR008949 Isoprenoid synthase domain SRM_RS07770 4be361bea9e2936f3a18db2e2bd29385 327 SUPERFAMILY SSF51735 111 288 1.23E-44 T 22-04-2016 IPR016040 NAD(P)-binding domain SRM_RS07770 4be361bea9e2936f3a18db2e2bd29385 327 PANTHER PTHR11695 15 325 4.9E-150 T 22-04-2016 IPR002085 Alcohol dehydrogenase superfamily, zinc-type GO:0008270|GO:0016491|GO:0055114 SRM_RS07770 4be361bea9e2936f3a18db2e2bd29385 327 Gene3D G3DSA:3.90.180.10 1 147 3.7E-48 T 22-04-2016 IPR011032 GroES-like SRM_RS07770 4be361bea9e2936f3a18db2e2bd29385 327 TIGRFAM TIGR02824 quinone_pig3: putative NAD(P)H quinone oxidoreductase, PIG3 family 1 325 3.2E-117 T 22-04-2016 IPR014189 Quinone oxidoreductase PIG3 KEGG: 00231+1.-.-.-|KEGG: 00592+1.-.-.-|KEGG: 00633+1.-.-.-|KEGG: 00780+1.-.-.-|KEGG: 00860+1.-.-.-|KEGG: 00950+1.-.-.-|KEGG: 00981+1.-.-.- SRM_RS07770 4be361bea9e2936f3a18db2e2bd29385 327 SUPERFAMILY SSF50129 1 139 1.34E-39 T 22-04-2016 IPR011032 GroES-like SRM_RS07770 4be361bea9e2936f3a18db2e2bd29385 327 PANTHER PTHR11695:SF610 15 325 4.9E-150 T 22-04-2016 SRM_RS07770 4be361bea9e2936f3a18db2e2bd29385 327 Pfam PF00107 Zinc-binding dehydrogenase 151 268 1.6E-25 T 22-04-2016 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 SRM_RS07770 4be361bea9e2936f3a18db2e2bd29385 327 SMART SM00829 10 323 3.6E-53 T 22-04-2016 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 SRM_RS07770 4be361bea9e2936f3a18db2e2bd29385 327 Gene3D G3DSA:3.40.50.720 148 259 8.9E-26 T 22-04-2016 IPR016040 NAD(P)-binding domain SRM_RS07770 4be361bea9e2936f3a18db2e2bd29385 327 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 28 86 9.7E-10 T 22-04-2016 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 SRM_RS03255 615252dc4136915231adfd21e845727d 341 SUPERFAMILY SSF53067 4 142 1.23E-9 T 22-04-2016 SRM_RS03255 615252dc4136915231adfd21e845727d 341 SUPERFAMILY SSF53067 160 311 1.55E-9 T 22-04-2016 SRM_RS01100 27b8da78adfbaf2311c6cf7ced6db597 511 PANTHER PTHR22726 8 276 8.5E-64 T 22-04-2016 SRM_RS01100 27b8da78adfbaf2311c6cf7ced6db597 511 Pfam PF01435 Peptidase family M48 102 273 3.5E-30 T 22-04-2016 IPR001915 Peptidase M48 GO:0004222|GO:0006508 SRM_RS01100 27b8da78adfbaf2311c6cf7ced6db597 511 Gene3D G3DSA:3.30.2010.10 76 164 1.7E-17 T 22-04-2016 SRM_RS01100 27b8da78adfbaf2311c6cf7ced6db597 511 PANTHER PTHR22726:SF9 8 276 8.5E-64 T 22-04-2016 SRM_RS06410 0c909fdce45caf0530566b7e26cfa4ea 509 Gene3D G3DSA:3.40.50.720 1 227 1.2E-42 T 22-04-2016 IPR016040 NAD(P)-binding domain SRM_RS06410 0c909fdce45caf0530566b7e26cfa4ea 509 Pfam PF13460 NAD(P)H-binding 12 126 1.1E-19 T 22-04-2016 IPR016040 NAD(P)-binding domain SRM_RS06410 0c909fdce45caf0530566b7e26cfa4ea 509 Pfam PF11066 Protein of unknown function (DUF2867) 336 475 1.7E-27 T 22-04-2016 IPR021295 Protein of unknown function DUF2867 SRM_RS06410 0c909fdce45caf0530566b7e26cfa4ea 509 SUPERFAMILY SSF51735 1 299 2.04E-47 T 22-04-2016 IPR016040 NAD(P)-binding domain SRM_RS06410 0c909fdce45caf0530566b7e26cfa4ea 509 PANTHER PTHR10366 264 307 4.9E-83 T 22-04-2016 SRM_RS06410 0c909fdce45caf0530566b7e26cfa4ea 509 PANTHER PTHR10366 7 243 4.9E-83 T 22-04-2016 SRM_RS06410 0c909fdce45caf0530566b7e26cfa4ea 509 PANTHER PTHR10366:SF401 264 307 4.9E-83 T 22-04-2016 SRM_RS06410 0c909fdce45caf0530566b7e26cfa4ea 509 PANTHER PTHR10366:SF401 7 243 4.9E-83 T 22-04-2016 SRM_RS06410 0c909fdce45caf0530566b7e26cfa4ea 509 SUPERFAMILY SSF55961 340 488 3.47E-8 T 22-04-2016 SRM_RS15295 2871de2fb619da154087642fbff5c762 186 SUPERFAMILY SSF69118 1 176 5.16E-51 T 22-04-2016 IPR029032 AhpD-like SRM_RS15295 2871de2fb619da154087642fbff5c762 186 TIGRFAM TIGR00778 ahpD_dom: alkylhydroperoxidase AhpD family core domain 60 99 8.9E-11 T 22-04-2016 IPR004675 Alkylhydroperoxidase AhpD core GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 SRM_RS15295 2871de2fb619da154087642fbff5c762 186 Gene3D G3DSA:1.20.1290.10 17 75 1.1E-5 T 22-04-2016 IPR029032 AhpD-like SRM_RS15295 2871de2fb619da154087642fbff5c762 186 TIGRFAM TIGR01926 peroxid_rel: uncharacterized peroxidase-related enzyme 2 178 2.1E-45 T 22-04-2016 IPR010195 Uncharacterised peroxidase-related SRM_RS15295 2871de2fb619da154087642fbff5c762 186 PANTHER PTHR35446 1 179 2.8E-32 T 22-04-2016 SRM_RS15295 2871de2fb619da154087642fbff5c762 186 Gene3D G3DSA:1.20.1290.10 76 179 3.7E-34 T 22-04-2016 IPR029032 AhpD-like SRM_RS15295 2871de2fb619da154087642fbff5c762 186 Pfam PF02627 Carboxymuconolactone decarboxylase family 48 125 4.9E-11 T 22-04-2016 IPR003779 Carboxymuconolactone decarboxylase-like GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 SRM_RS03140 751931f6846eb2c7e095f4b2fe574391 901 SUPERFAMILY SSF55486 514 594 4.0E-23 T 22-04-2016 SRM_RS03140 751931f6846eb2c7e095f4b2fe574391 901 SUPERFAMILY SSF55486 271 432 4.0E-23 T 22-04-2016 SRM_RS03140 751931f6846eb2c7e095f4b2fe574391 901 Gene3D G3DSA:3.40.390.10 515 598 1.4E-20 T 22-04-2016 IPR024079 Metallopeptidase, catalytic domain GO:0008237 SRM_RS03140 751931f6846eb2c7e095f4b2fe574391 901 Gene3D G3DSA:3.40.390.10 318 444 1.4E-20 T 22-04-2016 IPR024079 Metallopeptidase, catalytic domain GO:0008237 SRM_RS03140 751931f6846eb2c7e095f4b2fe574391 901 PANTHER PTHR38478 24 901 6.1E-118 T 22-04-2016 SRM_RS03140 751931f6846eb2c7e095f4b2fe574391 901 Pfam PF17148 Domain of unknown function (DUF5117) 141 330 2.4E-23 T 22-04-2016 IPR033413 Domain of unknown function DUF5117 SRM_RS03140 751931f6846eb2c7e095f4b2fe574391 901 Pfam PF16313 Met-zincin 506 823 6.7E-86 T 22-04-2016 IPR032534 Domian of unknown function DUF4953 SRM_RS13215 281f96a352bef9dbe5e060fcda8b23ff 429 SUPERFAMILY SSF63433 12 129 1.31E-38 T 22-04-2016 IPR015377 Fumarylacetoacetase, N-terminal GO:0004334|GO:0009072 KEGG: 00350+3.7.1.2|KEGG: 00643+3.7.1.2|UniPathway: UPA00139 SRM_RS13215 281f96a352bef9dbe5e060fcda8b23ff 429 Pfam PF01557 Fumarylacetoacetate (FAA) hydrolase family 135 423 1.7E-53 T 22-04-2016 IPR011234 Fumarylacetoacetase, C-terminal-related GO:0003824|GO:0008152 SRM_RS13215 281f96a352bef9dbe5e060fcda8b23ff 429 Gene3D G3DSA:3.90.850.10 132 418 1.2E-113 T 22-04-2016 IPR011234 Fumarylacetoacetase, C-terminal-related GO:0003824|GO:0008152 SRM_RS13215 281f96a352bef9dbe5e060fcda8b23ff 429 Pfam PF09298 Fumarylacetoacetase N-terminal 25 129 3.3E-31 T 22-04-2016 IPR015377 Fumarylacetoacetase, N-terminal GO:0004334|GO:0009072 KEGG: 00350+3.7.1.2|KEGG: 00643+3.7.1.2|UniPathway: UPA00139 SRM_RS13215 281f96a352bef9dbe5e060fcda8b23ff 429 Gene3D G3DSA:2.30.30.230 12 131 4.6E-40 T 22-04-2016 IPR015377 Fumarylacetoacetase, N-terminal GO:0004334|GO:0009072 KEGG: 00350+3.7.1.2|KEGG: 00643+3.7.1.2|UniPathway: UPA00139 SRM_RS13215 281f96a352bef9dbe5e060fcda8b23ff 429 PANTHER PTHR11820:SF1 7 98 3.8E-196 T 22-04-2016 IPR005959 Fumarylacetoacetase GO:0004334|GO:0009072 KEGG: 00350+3.7.1.2|KEGG: 00643+3.7.1.2|UniPathway: UPA00139 SRM_RS13215 281f96a352bef9dbe5e060fcda8b23ff 429 PANTHER PTHR11820:SF1 129 427 3.8E-196 T 22-04-2016 IPR005959 Fumarylacetoacetase GO:0004334|GO:0009072 KEGG: 00350+3.7.1.2|KEGG: 00643+3.7.1.2|UniPathway: UPA00139 SRM_RS13215 281f96a352bef9dbe5e060fcda8b23ff 429 TIGRFAM TIGR01266 fum_ac_acetase: fumarylacetoacetase 12 426 5.4E-185 T 22-04-2016 IPR005959 Fumarylacetoacetase GO:0004334|GO:0009072 KEGG: 00350+3.7.1.2|KEGG: 00643+3.7.1.2|UniPathway: UPA00139 SRM_RS13215 281f96a352bef9dbe5e060fcda8b23ff 429 PANTHER PTHR11820 7 98 3.8E-196 T 22-04-2016 SRM_RS13215 281f96a352bef9dbe5e060fcda8b23ff 429 PANTHER PTHR11820 129 427 3.8E-196 T 22-04-2016 SRM_RS13215 281f96a352bef9dbe5e060fcda8b23ff 429 SUPERFAMILY SSF56529 131 426 2.49E-101 T 22-04-2016 IPR011234 Fumarylacetoacetase, C-terminal-related GO:0003824|GO:0008152 SRM_RS11240 9c82cc1cb1254dfee5a2b7559b96f261 465 PANTHER PTHR23151 5 219 2.0E-182 T 22-04-2016 SRM_RS11240 9c82cc1cb1254dfee5a2b7559b96f261 465 PANTHER PTHR23151 235 465 2.0E-182 T 22-04-2016 SRM_RS11240 9c82cc1cb1254dfee5a2b7559b96f261 465 Pfam PF02817 e3 binding domain 154 189 4.4E-15 T 22-04-2016 IPR004167 E3-binding domain GO:0008152|GO:0016746 SRM_RS11240 9c82cc1cb1254dfee5a2b7559b96f261 465 SUPERFAMILY SSF51230 1 90 4.06E-25 T 22-04-2016 IPR011053 Single hybrid motif SRM_RS11240 9c82cc1cb1254dfee5a2b7559b96f261 465 ProSitePatterns PS00189 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 27 56 - T 22-04-2016 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site SRM_RS11240 9c82cc1cb1254dfee5a2b7559b96f261 465 Pfam PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) 235 465 7.8E-88 T 22-04-2016 IPR001078 2-oxoacid dehydrogenase acyltransferase, catalytic domain GO:0008152|GO:0016746 SRM_RS11240 9c82cc1cb1254dfee5a2b7559b96f261 465 Gene3D G3DSA:4.10.320.10 150 199 3.8E-20 T 22-04-2016 IPR004167 E3-binding domain GO:0008152|GO:0016746 SRM_RS11240 9c82cc1cb1254dfee5a2b7559b96f261 465 Gene3D G3DSA:3.30.559.10 230 465 5.6E-88 T 22-04-2016 IPR023213 Chloramphenicol acetyltransferase-like domain SRM_RS11240 9c82cc1cb1254dfee5a2b7559b96f261 465 TIGRFAM TIGR01349 PDHac_trf_mito: pyruvate dehydrogenase complex dihydrolipoamide acetyltransferase 5 465 1.5E-137 T 22-04-2016 IPR006257 Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex GO:0004742|GO:0006090|GO:0045254 KEGG: 00010+2.3.1.12|KEGG: 00020+2.3.1.12|KEGG: 00620+2.3.1.12 SRM_RS11240 9c82cc1cb1254dfee5a2b7559b96f261 465 Gene3D G3DSA:2.40.50.100 1 89 1.7E-29 T 22-04-2016 SRM_RS11240 9c82cc1cb1254dfee5a2b7559b96f261 465 SUPERFAMILY SSF52777 236 465 1.6E-81 T 22-04-2016 SRM_RS11240 9c82cc1cb1254dfee5a2b7559b96f261 465 Pfam PF00364 Biotin-requiring enzyme 5 76 5.0E-17 T 22-04-2016 IPR000089 Biotin/lipoyl attachment SRM_RS11240 9c82cc1cb1254dfee5a2b7559b96f261 465 SUPERFAMILY SSF47005 150 193 4.71E-12 T 22-04-2016 IPR004167 E3-binding domain GO:0008152|GO:0016746 SRM_RS11240 9c82cc1cb1254dfee5a2b7559b96f261 465 PANTHER PTHR23151:SF9 5 219 2.0E-182 T 22-04-2016 SRM_RS11240 9c82cc1cb1254dfee5a2b7559b96f261 465 PANTHER PTHR23151:SF9 235 465 2.0E-182 T 22-04-2016 SRM_RS13525 797ae11d5cbd6979f54f88419546b0db 423 Pfam PF02374 Anion-transporting ATPase 31 331 2.6E-83 T 22-04-2016 IPR025723 Anion-transporting ATPase-like domain SRM_RS13525 797ae11d5cbd6979f54f88419546b0db 423 PANTHER PTHR10803:SF0 31 415 3.6E-131 T 22-04-2016 SRM_RS13525 797ae11d5cbd6979f54f88419546b0db 423 SUPERFAMILY SSF52540 28 321 6.69E-47 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SRM_RS13525 797ae11d5cbd6979f54f88419546b0db 423 Gene3D G3DSA:3.40.50.300 28 322 8.4E-57 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SRM_RS13525 797ae11d5cbd6979f54f88419546b0db 423 PANTHER PTHR10803 31 415 3.6E-131 T 22-04-2016 IPR016300 Arsenical pump ATPase, ArsA/GET3 GO:0005524|GO:0016887 SRM_RS13525 797ae11d5cbd6979f54f88419546b0db 423 TIGRFAM TIGR00345 GET3_arsA_TRC40: transport-energizing ATPase, TRC40/GET3/ArsA family 34 329 2.9E-73 T 22-04-2016 IPR016300 Arsenical pump ATPase, ArsA/GET3 GO:0005524|GO:0016887 SRM_RS15290 762b554c7ac68050c03d54c381227e4c 412 Gene3D G3DSA:3.50.50.60 140 217 1.6E-34 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SRM_RS15290 762b554c7ac68050c03d54c381227e4c 412 Gene3D G3DSA:3.50.50.60 3 86 1.6E-34 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SRM_RS15290 762b554c7ac68050c03d54c381227e4c 412 SUPERFAMILY SSF51905 3 218 1.25E-48 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SRM_RS15290 762b554c7ac68050c03d54c381227e4c 412 SUPERFAMILY SSF51905 353 397 1.25E-48 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SRM_RS15290 762b554c7ac68050c03d54c381227e4c 412 PANTHER PTHR13847:SF191 3 392 4.8E-132 T 22-04-2016 SRM_RS15290 762b554c7ac68050c03d54c381227e4c 412 Gene3D G3DSA:3.30.9.10 89 139 1.4E-6 T 22-04-2016 SRM_RS15290 762b554c7ac68050c03d54c381227e4c 412 Pfam PF01266 FAD dependent oxidoreductase 5 392 3.7E-69 T 22-04-2016 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 SRM_RS15290 762b554c7ac68050c03d54c381227e4c 412 PANTHER PTHR13847 3 392 4.8E-132 T 22-04-2016 SRM_RS09515 1558a5dcc3c24fef34cea6fd0f888a30 283 Pfam PF12146 Serine aminopeptidase, S33 70 188 9.5E-11 T 22-04-2016 IPR022742 Serine aminopeptidase, S33 SRM_RS09515 1558a5dcc3c24fef34cea6fd0f888a30 283 Pfam PF12146 Serine aminopeptidase, S33 204 258 1.9E-7 T 22-04-2016 IPR022742 Serine aminopeptidase, S33 SRM_RS09515 1558a5dcc3c24fef34cea6fd0f888a30 283 Gene3D G3DSA:3.40.50.1820 28 261 2.1E-38 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold SRM_RS09515 1558a5dcc3c24fef34cea6fd0f888a30 283 SUPERFAMILY SSF53474 4 263 1.46E-41 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold SRM_RS09515 1558a5dcc3c24fef34cea6fd0f888a30 283 PANTHER PTHR12277 50 273 3.7E-46 T 22-04-2016 SRM_RS01210 e9f59fd1e6d1958d389204f0d58650ab 839 PANTHER PTHR22912 139 412 1.8E-28 T 22-04-2016 SRM_RS01210 e9f59fd1e6d1958d389204f0d58650ab 839 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 155 174 7.9E-11 T 22-04-2016 SRM_RS01210 e9f59fd1e6d1958d389204f0d58650ab 839 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 389 405 7.9E-11 T 22-04-2016 SRM_RS01210 e9f59fd1e6d1958d389204f0d58650ab 839 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 302 320 7.9E-11 T 22-04-2016 SRM_RS01210 e9f59fd1e6d1958d389204f0d58650ab 839 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 790 801 - T 22-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site SRM_RS01210 e9f59fd1e6d1958d389204f0d58650ab 839 Gene3D G3DSA:3.50.50.60 153 267 9.8E-18 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SRM_RS01210 e9f59fd1e6d1958d389204f0d58650ab 839 SUPERFAMILY SSF54862 701 818 1.52E-17 T 22-04-2016 SRM_RS01210 e9f59fd1e6d1958d389204f0d58650ab 839 SUPERFAMILY SSF54862 622 639 1.52E-17 T 22-04-2016 SRM_RS01210 e9f59fd1e6d1958d389204f0d58650ab 839 Pfam PF12801 4Fe-4S binding domain 602 651 2.5E-9 T 22-04-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain SRM_RS01210 e9f59fd1e6d1958d389204f0d58650ab 839 Pfam PF12801 4Fe-4S binding domain 712 751 4.8E-5 T 22-04-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain SRM_RS01210 e9f59fd1e6d1958d389204f0d58650ab 839 Pfam PF13738 Pyridine nucleotide-disulphide oxidoreductase 156 415 3.1E-32 T 22-04-2016 SRM_RS01210 e9f59fd1e6d1958d389204f0d58650ab 839 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 302 327 1.7E-15 T 22-04-2016 SRM_RS01210 e9f59fd1e6d1958d389204f0d58650ab 839 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 390 404 1.7E-15 T 22-04-2016 SRM_RS01210 e9f59fd1e6d1958d389204f0d58650ab 839 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 265 274 1.7E-15 T 22-04-2016 SRM_RS01210 e9f59fd1e6d1958d389204f0d58650ab 839 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 154 176 1.7E-15 T 22-04-2016 SRM_RS01210 e9f59fd1e6d1958d389204f0d58650ab 839 SUPERFAMILY SSF51905 153 422 9.33E-35 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SRM_RS01210 e9f59fd1e6d1958d389204f0d58650ab 839 SUPERFAMILY SSF51905 582 650 9.33E-35 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SRM_RS01210 e9f59fd1e6d1958d389204f0d58650ab 839 Gene3D G3DSA:3.30.70.20 728 813 5.6E-16 T 22-04-2016 SRM_RS01210 e9f59fd1e6d1958d389204f0d58650ab 839 Gene3D G3DSA:3.50.50.60 98 137 5.8E-5 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SRM_RS01210 e9f59fd1e6d1958d389204f0d58650ab 839 Gene3D G3DSA:3.50.50.60 268 415 2.2E-20 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SRM_RS03260 2c195e3a62d2a4711acaed0314527fd6 2014 SUPERFAMILY SSF55781 1474 1625 3.49E-7 T 22-04-2016 IPR029016 GAF domain-like SRM_RS03260 2c195e3a62d2a4711acaed0314527fd6 2014 SUPERFAMILY SSF55785 1096 1221 2.65E-16 T 22-04-2016 IPR000014 PAS domain SRM_RS03260 2c195e3a62d2a4711acaed0314527fd6 2014 SUPERFAMILY SSF55785 867 969 4.89E-13 T 22-04-2016 IPR000014 PAS domain SRM_RS03260 2c195e3a62d2a4711acaed0314527fd6 2014 Gene3D G3DSA:3.30.450.40 63 201 6.1E-12 T 22-04-2016 IPR029016 GAF domain-like SRM_RS03260 2c195e3a62d2a4711acaed0314527fd6 2014 Gene3D G3DSA:3.30.450.40 1483 1636 1.0E-8 T 22-04-2016 IPR029016 GAF domain-like SRM_RS03260 2c195e3a62d2a4711acaed0314527fd6 2014 SMART SM00388 1768 1843 2.1E-16 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SRM_RS03260 2c195e3a62d2a4711acaed0314527fd6 2014 Pfam PF08448 PAS fold 516 621 7.4E-12 T 22-04-2016 IPR013656 PAS fold-4 SRM_RS03260 2c195e3a62d2a4711acaed0314527fd6 2014 Gene3D G3DSA:3.30.450.20 738 851 1.6E-18 T 22-04-2016 SRM_RS03260 2c195e3a62d2a4711acaed0314527fd6 2014 Gene3D G3DSA:3.30.450.20 215 322 1.9E-13 T 22-04-2016 SRM_RS03260 2c195e3a62d2a4711acaed0314527fd6 2014 Gene3D G3DSA:3.30.450.20 853 966 1.4E-17 T 22-04-2016 SRM_RS03260 2c195e3a62d2a4711acaed0314527fd6 2014 SUPERFAMILY SSF55785 1344 1476 1.92E-16 T 22-04-2016 IPR000014 PAS domain SRM_RS03260 2c195e3a62d2a4711acaed0314527fd6 2014 SUPERFAMILY SSF55785 747 855 6.98E-18 T 22-04-2016 IPR000014 PAS domain SRM_RS03260 2c195e3a62d2a4711acaed0314527fd6 2014 SUPERFAMILY SSF47384 1753 1844 6.08E-17 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SRM_RS03260 2c195e3a62d2a4711acaed0314527fd6 2014 Pfam PF13426 PAS domain 991 1098 9.7E-13 T 22-04-2016 IPR000014 PAS domain SRM_RS03260 2c195e3a62d2a4711acaed0314527fd6 2014 Pfam PF13426 PAS domain 649 736 2.7E-4 T 22-04-2016 IPR000014 PAS domain SRM_RS03260 2c195e3a62d2a4711acaed0314527fd6 2014 SUPERFAMILY SSF55874 1834 1998 4.19E-44 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SRM_RS03260 2c195e3a62d2a4711acaed0314527fd6 2014 SUPERFAMILY SSF55781 65 202 4.14E-25 T 22-04-2016 IPR029016 GAF domain-like SRM_RS03260 2c195e3a62d2a4711acaed0314527fd6 2014 Pfam PF13188 PAS domain 1111 1173 3.4E-6 T 22-04-2016 IPR000014 PAS domain SRM_RS03260 2c195e3a62d2a4711acaed0314527fd6 2014 SUPERFAMILY SSF55785 1220 1345 7.78E-19 T 22-04-2016 IPR000014 PAS domain SRM_RS03260 2c195e3a62d2a4711acaed0314527fd6 2014 SMART SM00065 64 206 5.3E-6 T 22-04-2016 IPR003018 GAF domain GO:0005515 SRM_RS03260 2c195e3a62d2a4711acaed0314527fd6 2014 Pfam PF00512 His Kinase A (phospho-acceptor) domain 1768 1843 8.8E-14 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SRM_RS03260 2c195e3a62d2a4711acaed0314527fd6 2014 SMART SM00091 1639 1708 280.0 T 22-04-2016 IPR000014 PAS domain SRM_RS03260 2c195e3a62d2a4711acaed0314527fd6 2014 SMART SM00091 1235 1301 1.9E-9 T 22-04-2016 IPR000014 PAS domain SRM_RS03260 2c195e3a62d2a4711acaed0314527fd6 2014 SMART SM00091 858 922 0.11 T 22-04-2016 IPR000014 PAS domain SRM_RS03260 2c195e3a62d2a4711acaed0314527fd6 2014 SMART SM00091 1111 1178 1.1E-5 T 22-04-2016 IPR000014 PAS domain SRM_RS03260 2c195e3a62d2a4711acaed0314527fd6 2014 SMART SM00091 503 569 5.1E-4 T 22-04-2016 IPR000014 PAS domain SRM_RS03260 2c195e3a62d2a4711acaed0314527fd6 2014 SMART SM00091 375 441 3.0 T 22-04-2016 IPR000014 PAS domain SRM_RS03260 2c195e3a62d2a4711acaed0314527fd6 2014 SMART SM00091 742 806 2.3 T 22-04-2016 IPR000014 PAS domain SRM_RS03260 2c195e3a62d2a4711acaed0314527fd6 2014 SMART SM00091 1359 1428 0.049 T 22-04-2016 IPR000014 PAS domain SRM_RS03260 2c195e3a62d2a4711acaed0314527fd6 2014 SMART SM00091 628 694 2.5 T 22-04-2016 IPR000014 PAS domain SRM_RS03260 2c195e3a62d2a4711acaed0314527fd6 2014 SMART SM00091 981 1048 1.6E-9 T 22-04-2016 IPR000014 PAS domain SRM_RS03260 2c195e3a62d2a4711acaed0314527fd6 2014 Gene3D G3DSA:3.30.450.20 1097 1220 5.6E-16 T 22-04-2016 SRM_RS03260 2c195e3a62d2a4711acaed0314527fd6 2014 Gene3D G3DSA:3.30.450.20 497 618 5.0E-20 T 22-04-2016 SRM_RS03260 2c195e3a62d2a4711acaed0314527fd6 2014 Gene3D G3DSA:3.30.450.20 967 1096 1.3E-22 T 22-04-2016 SRM_RS03260 2c195e3a62d2a4711acaed0314527fd6 2014 Gene3D G3DSA:3.30.450.20 1221 1342 9.0E-23 T 22-04-2016 SRM_RS03260 2c195e3a62d2a4711acaed0314527fd6 2014 SUPERFAMILY SSF55785 488 618 2.97E-19 T 22-04-2016 IPR000014 PAS domain SRM_RS03260 2c195e3a62d2a4711acaed0314527fd6 2014 SUPERFAMILY SSF55785 381 493 4.71E-16 T 22-04-2016 IPR000014 PAS domain SRM_RS03260 2c195e3a62d2a4711acaed0314527fd6 2014 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 625 743 5.7E-7 T 22-04-2016 IPR000014 PAS domain SRM_RS03260 2c195e3a62d2a4711acaed0314527fd6 2014 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 785 860 1.2E-7 T 22-04-2016 IPR000014 PAS domain SRM_RS03260 2c195e3a62d2a4711acaed0314527fd6 2014 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 1358 1485 5.7E-9 T 22-04-2016 IPR000014 PAS domain SRM_RS03260 2c195e3a62d2a4711acaed0314527fd6 2014 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 978 1106 2.4E-14 T 22-04-2016 IPR000014 PAS domain SRM_RS03260 2c195e3a62d2a4711acaed0314527fd6 2014 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 1232 1354 6.0E-15 T 22-04-2016 IPR000014 PAS domain SRM_RS03260 2c195e3a62d2a4711acaed0314527fd6 2014 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 499 627 1.5E-13 T 22-04-2016 IPR000014 PAS domain SRM_RS03260 2c195e3a62d2a4711acaed0314527fd6 2014 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 1108 1230 1.3E-13 T 22-04-2016 IPR000014 PAS domain SRM_RS03260 2c195e3a62d2a4711acaed0314527fd6 2014 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 423 498 7.7E-8 T 22-04-2016 IPR000014 PAS domain SRM_RS03260 2c195e3a62d2a4711acaed0314527fd6 2014 Pfam PF08447 PAS fold 764 844 4.7E-12 T 22-04-2016 IPR013655 PAS fold-3 GO:0005515 SRM_RS03260 2c195e3a62d2a4711acaed0314527fd6 2014 Pfam PF08447 PAS fold 881 963 1.5E-9 T 22-04-2016 IPR013655 PAS fold-3 GO:0005515 SRM_RS03260 2c195e3a62d2a4711acaed0314527fd6 2014 Pfam PF08447 PAS fold 399 484 3.7E-13 T 22-04-2016 IPR013655 PAS fold-3 GO:0005515 SRM_RS03260 2c195e3a62d2a4711acaed0314527fd6 2014 Pfam PF08447 PAS fold 1383 1471 2.3E-11 T 22-04-2016 IPR013655 PAS fold-3 GO:0005515 SRM_RS03260 2c195e3a62d2a4711acaed0314527fd6 2014 Pfam PF08447 PAS fold 252 324 1.3E-9 T 22-04-2016 IPR013655 PAS fold-3 GO:0005515 SRM_RS03260 2c195e3a62d2a4711acaed0314527fd6 2014 Gene3D G3DSA:3.30.565.10 1844 2003 4.0E-45 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SRM_RS03260 2c195e3a62d2a4711acaed0314527fd6 2014 Pfam PF00989 PAS fold 1236 1344 1.7E-8 T 22-04-2016 IPR013767 PAS fold GO:0006355 SRM_RS03260 2c195e3a62d2a4711acaed0314527fd6 2014 Gene3D G3DSA:1.10.287.130 1760 1839 4.4E-17 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SRM_RS03260 2c195e3a62d2a4711acaed0314527fd6 2014 Gene3D G3DSA:3.30.450.20 1637 1747 6.2E-6 T 22-04-2016 SRM_RS03260 2c195e3a62d2a4711acaed0314527fd6 2014 Gene3D G3DSA:3.30.450.20 621 737 3.0E-14 T 22-04-2016 SRM_RS03260 2c195e3a62d2a4711acaed0314527fd6 2014 SUPERFAMILY SSF55785 966 1097 5.59E-21 T 22-04-2016 IPR000014 PAS domain SRM_RS03260 2c195e3a62d2a4711acaed0314527fd6 2014 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 1890 1999 5.6E-27 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SRM_RS03260 2c195e3a62d2a4711acaed0314527fd6 2014 PANTHER PTHR24423 1747 2003 6.1E-119 T 22-04-2016 SRM_RS03260 2c195e3a62d2a4711acaed0314527fd6 2014 PANTHER PTHR24423 1436 1476 6.1E-119 T 22-04-2016 SRM_RS03260 2c195e3a62d2a4711acaed0314527fd6 2014 PANTHER PTHR24423 368 506 6.1E-119 T 22-04-2016 SRM_RS03260 2c195e3a62d2a4711acaed0314527fd6 2014 PANTHER PTHR24423 979 1053 6.1E-119 T 22-04-2016 SRM_RS03260 2c195e3a62d2a4711acaed0314527fd6 2014 SMART SM00086 300 335 180.0 T 22-04-2016 IPR001610 PAC motif SRM_RS03260 2c195e3a62d2a4711acaed0314527fd6 2014 SMART SM00086 1181 1223 9.9 T 22-04-2016 IPR001610 PAC motif SRM_RS03260 2c195e3a62d2a4711acaed0314527fd6 2014 SMART SM00086 700 737 8.1 T 22-04-2016 IPR001610 PAC motif SRM_RS03260 2c195e3a62d2a4711acaed0314527fd6 2014 SMART SM00086 449 491 4.3E-7 T 22-04-2016 IPR001610 PAC motif SRM_RS03260 2c195e3a62d2a4711acaed0314527fd6 2014 SMART SM00086 928 969 21.0 T 22-04-2016 IPR001610 PAC motif SRM_RS03260 2c195e3a62d2a4711acaed0314527fd6 2014 SMART SM00086 578 620 6.1 T 22-04-2016 IPR001610 PAC motif SRM_RS03260 2c195e3a62d2a4711acaed0314527fd6 2014 SMART SM00086 1059 1099 32.0 T 22-04-2016 IPR001610 PAC motif SRM_RS03260 2c195e3a62d2a4711acaed0314527fd6 2014 SMART SM00086 812 853 6.4E-6 T 22-04-2016 IPR001610 PAC motif SRM_RS03260 2c195e3a62d2a4711acaed0314527fd6 2014 SMART SM00086 1436 1478 3.4E-4 T 22-04-2016 IPR001610 PAC motif SRM_RS03260 2c195e3a62d2a4711acaed0314527fd6 2014 SMART SM00086 1306 1347 28.0 T 22-04-2016 IPR001610 PAC motif SRM_RS03260 2c195e3a62d2a4711acaed0314527fd6 2014 SUPERFAMILY SSF55785 247 322 6.28E-8 T 22-04-2016 IPR000014 PAS domain SRM_RS03260 2c195e3a62d2a4711acaed0314527fd6 2014 PRINTS PR00344 Bacterial sensor protein C-terminal signature 1984 1997 6.0E-14 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SRM_RS03260 2c195e3a62d2a4711acaed0314527fd6 2014 PRINTS PR00344 Bacterial sensor protein C-terminal signature 1925 1939 6.0E-14 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SRM_RS03260 2c195e3a62d2a4711acaed0314527fd6 2014 PRINTS PR00344 Bacterial sensor protein C-terminal signature 1960 1978 6.0E-14 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SRM_RS03260 2c195e3a62d2a4711acaed0314527fd6 2014 PRINTS PR00344 Bacterial sensor protein C-terminal signature 1943 1953 6.0E-14 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SRM_RS03260 2c195e3a62d2a4711acaed0314527fd6 2014 SMART SM00387 1889 2000 4.4E-37 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SRM_RS03260 2c195e3a62d2a4711acaed0314527fd6 2014 Pfam PF01590 GAF domain 65 178 3.1E-9 T 22-04-2016 IPR003018 GAF domain GO:0005515 SRM_RS03260 2c195e3a62d2a4711acaed0314527fd6 2014 SUPERFAMILY SSF55785 620 735 1.52E-11 T 22-04-2016 IPR000014 PAS domain SRM_RS03260 2c195e3a62d2a4711acaed0314527fd6 2014 Gene3D G3DSA:3.30.450.20 1343 1482 1.8E-24 T 22-04-2016 SRM_RS03260 2c195e3a62d2a4711acaed0314527fd6 2014 Gene3D G3DSA:3.30.450.20 346 496 7.9E-24 T 22-04-2016 SRM_RS01495 4390e1d622d76d9083d123eeae954a8b 235 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 198 206 4.4E-14 T 22-04-2016 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 SRM_RS01495 4390e1d622d76d9083d123eeae954a8b 235 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 34 44 4.4E-14 T 22-04-2016 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 SRM_RS01495 4390e1d622d76d9083d123eeae954a8b 235 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 134 143 4.4E-14 T 22-04-2016 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 SRM_RS01495 4390e1d622d76d9083d123eeae954a8b 235 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 146 157 4.4E-14 T 22-04-2016 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 SRM_RS01495 4390e1d622d76d9083d123eeae954a8b 235 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 110 129 4.4E-14 T 22-04-2016 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 SRM_RS01495 4390e1d622d76d9083d123eeae954a8b 235 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 76 85 4.4E-14 T 22-04-2016 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 SRM_RS01495 4390e1d622d76d9083d123eeae954a8b 235 PANTHER PTHR19370 9 230 1.4E-44 T 22-04-2016 SRM_RS01495 4390e1d622d76d9083d123eeae954a8b 235 SUPERFAMILY SSF63380 5 103 3.87E-25 T 22-04-2016 IPR017938 Riboflavin synthase-like beta-barrel GO:0016491|GO:0055114 SRM_RS01495 4390e1d622d76d9083d123eeae954a8b 235 Pfam PF00970 Oxidoreductase FAD-binding domain 8 100 4.5E-13 T 22-04-2016 IPR008333 Oxidoreductase, FAD-binding domain SRM_RS01495 4390e1d622d76d9083d123eeae954a8b 235 SUPERFAMILY SSF52343 91 228 7.6E-31 T 22-04-2016 SRM_RS01495 4390e1d622d76d9083d123eeae954a8b 235 Gene3D G3DSA:2.40.30.10 6 98 1.2E-22 T 22-04-2016 SRM_RS01495 4390e1d622d76d9083d123eeae954a8b 235 Pfam PF00175 Oxidoreductase NAD-binding domain 111 210 9.2E-19 T 22-04-2016 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 SRM_RS01495 4390e1d622d76d9083d123eeae954a8b 235 Gene3D G3DSA:3.40.50.80 104 231 4.1E-33 T 22-04-2016 SRM_RS01495 4390e1d622d76d9083d123eeae954a8b 235 PRINTS PR00406 Cytochrome B5 reductase signature 110 129 3.5E-11 T 22-04-2016 IPR001834 NADH:cytochrome b5 reductase (CBR) GO:0016491|GO:0055114 SRM_RS01495 4390e1d622d76d9083d123eeae954a8b 235 PRINTS PR00406 Cytochrome B5 reductase signature 88 102 3.5E-11 T 22-04-2016 IPR001834 NADH:cytochrome b5 reductase (CBR) GO:0016491|GO:0055114 SRM_RS01495 4390e1d622d76d9083d123eeae954a8b 235 PRINTS PR00406 Cytochrome B5 reductase signature 198 206 3.5E-11 T 22-04-2016 IPR001834 NADH:cytochrome b5 reductase (CBR) GO:0016491|GO:0055114 SRM_RS01495 4390e1d622d76d9083d123eeae954a8b 235 PRINTS PR00406 Cytochrome B5 reductase signature 146 157 3.5E-11 T 22-04-2016 IPR001834 NADH:cytochrome b5 reductase (CBR) GO:0016491|GO:0055114 SRM_RS01495 4390e1d622d76d9083d123eeae954a8b 235 PRINTS PR00406 Cytochrome B5 reductase signature 32 43 3.5E-11 T 22-04-2016 IPR001834 NADH:cytochrome b5 reductase (CBR) GO:0016491|GO:0055114 SRM_RS01495 4390e1d622d76d9083d123eeae954a8b 235 PRINTS PR00406 Cytochrome B5 reductase signature 53 60 3.5E-11 T 22-04-2016 IPR001834 NADH:cytochrome b5 reductase (CBR) GO:0016491|GO:0055114 SRM_RS02935 8f475915ec0f3e84d67951c75a6db692 245 PANTHER PTHR33695:SF1 1 130 3.4E-34 T 22-04-2016 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 UniPathway: UPA00665 SRM_RS02935 8f475915ec0f3e84d67951c75a6db692 245 PANTHER PTHR33695:SF1 146 186 3.4E-34 T 22-04-2016 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 UniPathway: UPA00665 SRM_RS02935 8f475915ec0f3e84d67951c75a6db692 245 Pfam PF01252 Signal peptidase (SPase) II 7 167 3.9E-31 T 22-04-2016 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 UniPathway: UPA00665 SRM_RS02935 8f475915ec0f3e84d67951c75a6db692 245 Hamap MF_00161 Lipoprotein signal peptidase [lspA]. 2 176 13.375 T 22-04-2016 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 UniPathway: UPA00665 SRM_RS02935 8f475915ec0f3e84d67951c75a6db692 245 PRINTS PR00781 Lipoprotein signal peptidase family (A8) signature 151 167 8.3E-13 T 22-04-2016 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 UniPathway: UPA00665 SRM_RS02935 8f475915ec0f3e84d67951c75a6db692 245 PRINTS PR00781 Lipoprotein signal peptidase family (A8) signature 89 104 8.3E-13 T 22-04-2016 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 UniPathway: UPA00665 SRM_RS02935 8f475915ec0f3e84d67951c75a6db692 245 PRINTS PR00781 Lipoprotein signal peptidase family (A8) signature 45 53 8.3E-13 T 22-04-2016 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 UniPathway: UPA00665 SRM_RS02935 8f475915ec0f3e84d67951c75a6db692 245 PANTHER PTHR33695 1 130 3.4E-34 T 22-04-2016 SRM_RS02935 8f475915ec0f3e84d67951c75a6db692 245 PANTHER PTHR33695 146 186 3.4E-34 T 22-04-2016 SRM_RS02935 8f475915ec0f3e84d67951c75a6db692 245 ProSitePatterns PS00855 Signal peptidases II signature. 92 104 - T 22-04-2016 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 UniPathway: UPA00665 SRM_RS12085 c1b0988806a0ad4384db117f42e06860 575 PANTHER PTHR41301 86 575 3.7E-83 T 22-04-2016 SRM_RS12085 c1b0988806a0ad4384db117f42e06860 575 Hamap MF_01867 Putative cysteine ligase BshC [bshC]. 38 575 29.747 T 22-04-2016 IPR011199 Bacillithiol biosynthesis BshC SRM_RS12085 c1b0988806a0ad4384db117f42e06860 575 TIGRFAM TIGR03998 thiol_BshC: bacillithiol biosynthesis cysteine-adding enzyme BshC 49 573 1.2E-185 T 22-04-2016 IPR011199 Bacillithiol biosynthesis BshC SRM_RS12085 c1b0988806a0ad4384db117f42e06860 575 Gene3D G3DSA:1.20.120.20 422 533 5.8E-5 T 22-04-2016 SRM_RS12085 c1b0988806a0ad4384db117f42e06860 575 Pfam PF10079 Uncharacterized protein conserved in bacteria (DUF2317) 47 572 2.3E-155 T 22-04-2016 IPR011199 Bacillithiol biosynthesis BshC SRM_RS12085 c1b0988806a0ad4384db117f42e06860 575 PIRSF PIRSF012535 42 575 6.2E-127 T 22-04-2016 IPR011199 Bacillithiol biosynthesis BshC SRM_RS13575 f7fe78a1b38008c589bfbb06c788ab9c 706 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 659 671 1.1E-17 T 22-04-2016 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755|GO:0006457 SRM_RS13575 f7fe78a1b38008c589bfbb06c788ab9c 706 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 605 617 1.1E-17 T 22-04-2016 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755|GO:0006457 SRM_RS13575 f7fe78a1b38008c589bfbb06c788ab9c 706 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 672 687 1.1E-17 T 22-04-2016 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755|GO:0006457 SRM_RS13575 f7fe78a1b38008c589bfbb06c788ab9c 706 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 644 659 1.1E-17 T 22-04-2016 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755|GO:0006457 SRM_RS13575 f7fe78a1b38008c589bfbb06c788ab9c 706 Pfam PF13646 HEAT repeats 84 165 2.1E-10 T 22-04-2016 SRM_RS13575 f7fe78a1b38008c589bfbb06c788ab9c 706 Pfam PF13646 HEAT repeats 209 296 5.3E-7 T 22-04-2016 SRM_RS13575 f7fe78a1b38008c589bfbb06c788ab9c 706 PANTHER PTHR11071:SF78 502 700 3.4E-42 T 22-04-2016 SRM_RS13575 f7fe78a1b38008c589bfbb06c788ab9c 706 SUPERFAMILY SSF50891 563 694 5.7E-42 T 22-04-2016 IPR029000 Cyclophilin-like domain SRM_RS13575 f7fe78a1b38008c589bfbb06c788ab9c 706 SMART SM00567 E-Z type HEAT repeats 122 151 1.9 T 22-04-2016 IPR004155 PBS lyase HEAT-like repeat SRM_RS13575 f7fe78a1b38008c589bfbb06c788ab9c 706 SMART SM00567 E-Z type HEAT repeats 91 120 0.023 T 22-04-2016 IPR004155 PBS lyase HEAT-like repeat SRM_RS13575 f7fe78a1b38008c589bfbb06c788ab9c 706 SMART SM00567 E-Z type HEAT repeats 154 183 160.0 T 22-04-2016 IPR004155 PBS lyase HEAT-like repeat SRM_RS13575 f7fe78a1b38008c589bfbb06c788ab9c 706 SMART SM00567 E-Z type HEAT repeats 219 250 60.0 T 22-04-2016 IPR004155 PBS lyase HEAT-like repeat SRM_RS13575 f7fe78a1b38008c589bfbb06c788ab9c 706 SMART SM00567 E-Z type HEAT repeats 286 316 41.0 T 22-04-2016 IPR004155 PBS lyase HEAT-like repeat SRM_RS13575 f7fe78a1b38008c589bfbb06c788ab9c 706 Pfam PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 567 695 3.6E-37 T 22-04-2016 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755|GO:0006457 SRM_RS13575 f7fe78a1b38008c589bfbb06c788ab9c 706 ProSitePatterns PS00170 Cyclophilin-type peptidyl-prolyl cis-trans isomerase signature. 600 617 - T 22-04-2016 IPR020892 Cyclophilin-type peptidyl-prolyl cis-trans isomerase, conserved site GO:0003755|GO:0006457 SRM_RS13575 f7fe78a1b38008c589bfbb06c788ab9c 706 SUPERFAMILY SSF48371 80 141 1.05E-22 T 22-04-2016 IPR016024 Armadillo-type fold GO:0005488 SRM_RS13575 f7fe78a1b38008c589bfbb06c788ab9c 706 SUPERFAMILY SSF48371 399 533 1.05E-22 T 22-04-2016 IPR016024 Armadillo-type fold GO:0005488 SRM_RS13575 f7fe78a1b38008c589bfbb06c788ab9c 706 SUPERFAMILY SSF48371 200 306 1.05E-22 T 22-04-2016 IPR016024 Armadillo-type fold GO:0005488 SRM_RS13575 f7fe78a1b38008c589bfbb06c788ab9c 706 PANTHER PTHR11071 502 700 3.4E-42 T 22-04-2016 IPR024936 Cyclophilin-type peptidyl-prolyl cis-trans isomerase GO:0003755|GO:0006457 SRM_RS13575 f7fe78a1b38008c589bfbb06c788ab9c 706 Gene3D G3DSA:2.40.100.10 562 695 7.5E-40 T 22-04-2016 IPR029000 Cyclophilin-like domain SRM_RS13575 f7fe78a1b38008c589bfbb06c788ab9c 706 Gene3D G3DSA:1.25.10.10 391 542 3.9E-9 T 22-04-2016 IPR011989 Armadillo-like helical SRM_RS13575 f7fe78a1b38008c589bfbb06c788ab9c 706 Gene3D G3DSA:1.25.10.10 65 329 4.8E-29 T 22-04-2016 IPR011989 Armadillo-like helical SRM_RS06820 950baade4546ec7dc377cc4b85cb6f5a 368 Gene3D G3DSA:2.40.160.20 115 128 6.0E-8 T 22-04-2016 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 SRM_RS06820 950baade4546ec7dc377cc4b85cb6f5a 368 Gene3D G3DSA:2.40.160.20 198 327 6.0E-8 T 22-04-2016 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 SRM_RS06820 950baade4546ec7dc377cc4b85cb6f5a 368 SUPERFAMILY SSF56925 194 365 4.97E-10 T 22-04-2016 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 SRM_RS02740 f79cde8f293930b0bf54c32c57ddc444 419 PANTHER PTHR23505 6 381 2.4E-24 T 22-04-2016 SRM_RS02740 f79cde8f293930b0bf54c32c57ddc444 419 PANTHER PTHR23505 400 406 2.4E-24 T 22-04-2016 SRM_RS02740 f79cde8f293930b0bf54c32c57ddc444 419 Gene3D G3DSA:1.20.1250.20 226 407 3.0E-14 T 22-04-2016 SRM_RS02740 f79cde8f293930b0bf54c32c57ddc444 419 Gene3D G3DSA:1.20.1250.20 8 192 7.4E-19 T 22-04-2016 SRM_RS02740 f79cde8f293930b0bf54c32c57ddc444 419 PANTHER PTHR23505:SF8 6 381 2.4E-24 T 22-04-2016 SRM_RS02740 f79cde8f293930b0bf54c32c57ddc444 419 PANTHER PTHR23505:SF8 400 406 2.4E-24 T 22-04-2016 SRM_RS02740 f79cde8f293930b0bf54c32c57ddc444 419 Pfam PF07690 Major Facilitator Superfamily 27 364 4.6E-28 T 22-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 SRM_RS02740 f79cde8f293930b0bf54c32c57ddc444 419 SUPERFAMILY SSF103473 1 410 1.29E-47 T 22-04-2016 IPR020846 Major facilitator superfamily domain SRM_RS16010 47f41b1cf10a3452ae852bc451e8559b 249 SUPERFAMILY SSF51412 29 89 2.52E-8 T 22-04-2016 SRM_RS16010 47f41b1cf10a3452ae852bc451e8559b 249 PANTHER PTHR32332 152 229 9.8E-39 T 22-04-2016 SRM_RS16010 47f41b1cf10a3452ae852bc451e8559b 249 PANTHER PTHR32332 15 116 9.8E-39 T 22-04-2016 SRM_RS16010 47f41b1cf10a3452ae852bc451e8559b 249 Gene3D G3DSA:3.20.20.70 34 116 1.0E-8 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 SRM_RS16010 47f41b1cf10a3452ae852bc451e8559b 249 PANTHER PTHR32332:SF24 152 229 9.8E-39 T 22-04-2016 SRM_RS16010 47f41b1cf10a3452ae852bc451e8559b 249 PANTHER PTHR32332:SF24 15 116 9.8E-39 T 22-04-2016 SRM_RS15485 fe0676c0f3becf252893740be449a45e 115 Hamap MF_00382 50S ribosomal protein L20 [rplT]. 2 115 27.966 T 22-04-2016 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 SRM_RS15485 fe0676c0f3becf252893740be449a45e 115 Gene3D G3DSA:1.10.1900.20 55 114 1.5E-28 T 22-04-2016 SRM_RS15485 fe0676c0f3becf252893740be449a45e 115 PANTHER PTHR10986 2 111 5.4E-54 T 22-04-2016 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 SRM_RS15485 fe0676c0f3becf252893740be449a45e 115 TIGRFAM TIGR01032 rplT_bact: ribosomal protein bL20 1 113 1.6E-46 T 22-04-2016 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 SRM_RS15485 fe0676c0f3becf252893740be449a45e 115 ProSitePatterns PS00937 Ribosomal protein L20 signature. 54 70 - T 22-04-2016 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 SRM_RS15485 fe0676c0f3becf252893740be449a45e 115 PRINTS PR00062 Ribosomal protein L20 signature 42 71 8.9E-38 T 22-04-2016 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 SRM_RS15485 fe0676c0f3becf252893740be449a45e 115 PRINTS PR00062 Ribosomal protein L20 signature 75 101 8.9E-38 T 22-04-2016 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 SRM_RS15485 fe0676c0f3becf252893740be449a45e 115 PRINTS PR00062 Ribosomal protein L20 signature 12 41 8.9E-38 T 22-04-2016 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 SRM_RS15485 fe0676c0f3becf252893740be449a45e 115 ProDom PD002389 RIBOSOMAL RRNA-BINDING RNA-BINDING RIBONUCLEOPROTEIN L20 50S L20 CHLOROPLAST BACTERIAL ORGANELLE 21 72 3.0E-9 T 22-04-2016 SRM_RS15485 fe0676c0f3becf252893740be449a45e 115 SUPERFAMILY SSF74731 2 114 2.75E-45 T 22-04-2016 SRM_RS15485 fe0676c0f3becf252893740be449a45e 115 Pfam PF00453 Ribosomal protein L20 3 109 1.8E-45 T 22-04-2016 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 SRM_RS13290 342dd38256811aefd6345992fea874e3 545 SUPERFAMILY SSF51338 9 47 1.08E-6 T 22-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 SRM_RS13290 342dd38256811aefd6345992fea874e3 545 SUPERFAMILY SSF51338 293 334 1.08E-6 T 22-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 SRM_RS13290 342dd38256811aefd6345992fea874e3 545 PANTHER PTHR11113:SF2 7 326 7.8E-151 T 22-04-2016 SRM_RS13290 342dd38256811aefd6345992fea874e3 545 PANTHER PTHR11113:SF2 365 536 7.8E-151 T 22-04-2016 SRM_RS13290 342dd38256811aefd6345992fea874e3 545 Pfam PF01979 Amidohydrolase family 45 324 3.7E-25 T 22-04-2016 IPR006680 Amidohydrolase-related GO:0016787 SRM_RS13290 342dd38256811aefd6345992fea874e3 545 Gene3D G3DSA:2.30.40.10 9 83 2.8E-7 T 22-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 SRM_RS13290 342dd38256811aefd6345992fea874e3 545 PANTHER PTHR11113 7 326 7.8E-151 T 22-04-2016 SRM_RS13290 342dd38256811aefd6345992fea874e3 545 PANTHER PTHR11113 365 536 7.8E-151 T 22-04-2016 SRM_RS13290 342dd38256811aefd6345992fea874e3 545 Hamap MF_01518 Adenine deaminase [ade]. 3 541 34.715 T 22-04-2016 IPR006679 Adenine deaminase GO:0000034|GO:0006146 KEGG: 00230+3.5.4.2|MetaCyc: PWY-6610 SRM_RS13290 342dd38256811aefd6345992fea874e3 545 SUPERFAMILY SSF51556 48 291 1.48E-38 T 22-04-2016 IPR032466 Metal-dependent hydrolase SRM_RS13290 342dd38256811aefd6345992fea874e3 545 Gene3D G3DSA:2.30.40.10 237 330 1.2E-8 T 22-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 SRM_RS13290 342dd38256811aefd6345992fea874e3 545 Pfam PF13382 Adenine deaminase C-terminal domain 372 537 1.7E-60 T 22-04-2016 IPR026912 Adenine deaminase C-terminal domain KEGG: 00230+3.5.4.2|MetaCyc: PWY-6610 SRM_RS13290 342dd38256811aefd6345992fea874e3 545 TIGRFAM TIGR01178 ade: adenine deaminase 9 541 5.8E-175 T 22-04-2016 IPR006679 Adenine deaminase GO:0000034|GO:0006146 KEGG: 00230+3.5.4.2|MetaCyc: PWY-6610 SRM_RS07695 2ab6b677c9ae2036ca3edfe35c0376fa 114 PANTHER PTHR12526:SF387 8 113 1.1E-24 T 22-04-2016 SRM_RS07695 2ab6b677c9ae2036ca3edfe35c0376fa 114 Pfam PF01050 Mannose-6-phosphate isomerase 8 109 6.0E-33 T 22-04-2016 IPR001538 Mannose-6-phosphate isomerase, type II, C-terminal GO:0005976|GO:0016779 KEGG: 00051+2.7.7.13|KEGG: 00520+2.7.7.13|MetaCyc: PWY-5659|MetaCyc: PWY-882|UniPathway: UPA00126 SRM_RS07695 2ab6b677c9ae2036ca3edfe35c0376fa 114 Gene3D G3DSA:2.60.120.10 6 113 3.3E-33 T 22-04-2016 IPR014710 RmlC-like jelly roll fold SRM_RS07695 2ab6b677c9ae2036ca3edfe35c0376fa 114 SUPERFAMILY SSF51182 6 113 2.03E-29 T 22-04-2016 IPR011051 RmlC-like cupin domain SRM_RS07695 2ab6b677c9ae2036ca3edfe35c0376fa 114 PANTHER PTHR12526 8 113 1.1E-24 T 22-04-2016 SRM_RS09435 656a14c93a6c118898ef777f47a9a9b8 461 Gene3D G3DSA:3.40.50.300 96 300 9.9E-75 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SRM_RS09435 656a14c93a6c118898ef777f47a9a9b8 461 Gene3D G3DSA:1.20.120.140 2 89 8.0E-32 T 22-04-2016 SRM_RS09435 656a14c93a6c118898ef777f47a9a9b8 461 TIGRFAM TIGR00959 ffh: signal recognition particle protein 2 428 2.7E-180 T 22-04-2016 IPR004780 Signal recognition particle protein Ffh GO:0003924|GO:0005525|GO:0006614|GO:0048500 SRM_RS09435 656a14c93a6c118898ef777f47a9a9b8 461 Pfam PF00448 SRP54-type protein, GTPase domain 100 299 7.9E-72 T 22-04-2016 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: REACT_15380 SRM_RS09435 656a14c93a6c118898ef777f47a9a9b8 461 Hamap MF_00306 Signal recognition particle 54 kDa protein [srp54]. 5 446 33.475 T 22-04-2016 IPR022941 Signal recognition particle, SRP54 subunit GO:0003924|GO:0005525|GO:0006614|GO:0048500 SRM_RS09435 656a14c93a6c118898ef777f47a9a9b8 461 SMART SM00962 100 299 1.0E-107 T 22-04-2016 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: REACT_15380 SRM_RS09435 656a14c93a6c118898ef777f47a9a9b8 461 SUPERFAMILY SSF52540 42 357 3.45E-56 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SRM_RS09435 656a14c93a6c118898ef777f47a9a9b8 461 Pfam PF02978 Signal peptide binding domain 330 427 1.0E-34 T 22-04-2016 IPR004125 Signal recognition particle, SRP54 subunit, M-domain GO:0006614|GO:0008312|GO:0048500 SRM_RS09435 656a14c93a6c118898ef777f47a9a9b8 461 ProSitePatterns PS00300 SRP54-type proteins GTP-binding domain signature. 272 285 - T 22-04-2016 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: REACT_15380 SRM_RS09435 656a14c93a6c118898ef777f47a9a9b8 461 PANTHER PTHR11564 1 434 4.0E-242 T 22-04-2016 SRM_RS09435 656a14c93a6c118898ef777f47a9a9b8 461 SMART SM00382 99 250 6.2E-9 T 22-04-2016 IPR003593 AAA+ ATPase domain SRM_RS09435 656a14c93a6c118898ef777f47a9a9b8 461 SUPERFAMILY SSF47446 330 430 2.78E-36 T 22-04-2016 IPR004125 Signal recognition particle, SRP54 subunit, M-domain GO:0006614|GO:0008312|GO:0048500 SRM_RS09435 656a14c93a6c118898ef777f47a9a9b8 461 SMART SM00963 1 86 1.8E-31 T 22-04-2016 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: REACT_15380 SRM_RS09435 656a14c93a6c118898ef777f47a9a9b8 461 PANTHER PTHR11564:SF7 1 434 4.0E-242 T 22-04-2016 IPR004780 Signal recognition particle protein Ffh GO:0003924|GO:0005525|GO:0006614|GO:0048500 SRM_RS09435 656a14c93a6c118898ef777f47a9a9b8 461 Pfam PF02881 SRP54-type protein, helical bundle domain 5 82 2.3E-21 T 22-04-2016 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: REACT_15380 SRM_RS09435 656a14c93a6c118898ef777f47a9a9b8 461 Gene3D G3DSA:1.10.260.30 330 432 3.9E-40 T 22-04-2016 IPR004125 Signal recognition particle, SRP54 subunit, M-domain GO:0006614|GO:0008312|GO:0048500 SRM_RS02420 94a4adfc58238472117bb403cb1d7f48 870 PANTHER PTHR11482:SF5 482 865 4.7E-120 T 22-04-2016 SRM_RS02420 94a4adfc58238472117bb403cb1d7f48 870 PRINTS PR01181 Diaminopimelate decarboxylase signature 854 870 4.0E-13 T 22-04-2016 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 SRM_RS02420 94a4adfc58238472117bb403cb1d7f48 870 PRINTS PR01181 Diaminopimelate decarboxylase signature 555 572 4.0E-13 T 22-04-2016 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 SRM_RS02420 94a4adfc58238472117bb403cb1d7f48 870 PRINTS PR01181 Diaminopimelate decarboxylase signature 641 650 4.0E-13 T 22-04-2016 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 SRM_RS02420 94a4adfc58238472117bb403cb1d7f48 870 PRINTS PR01181 Diaminopimelate decarboxylase signature 772 790 4.0E-13 T 22-04-2016 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 SRM_RS02420 94a4adfc58238472117bb403cb1d7f48 870 TIGRFAM TIGR00657 asp_kinases: aspartate kinase 9 464 6.9E-90 T 22-04-2016 IPR001341 Aspartate kinase domain GO:0004072|GO:0008652 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|UniPathway: UPA00034|UniPathway: UPA00050|UniPathway: UPA00051 SRM_RS02420 94a4adfc58238472117bb403cb1d7f48 870 ProSitePatterns PS00879 Orn/DAP/Arg decarboxylases family 2 signature 2. 697 713 - T 22-04-2016 IPR022657 Orn/DAP/Arg decarboxylase 2, conserved site Reactome: REACT_13 SRM_RS02420 94a4adfc58238472117bb403cb1d7f48 870 SUPERFAMILY SSF55021 315 409 4.48E-14 T 22-04-2016 SRM_RS02420 94a4adfc58238472117bb403cb1d7f48 870 Gene3D G3DSA:3.20.20.10 534 743 7.9E-55 T 22-04-2016 IPR029066 PLP-binding barrel SRM_RS02420 94a4adfc58238472117bb403cb1d7f48 870 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 744 763 4.3E-23 T 22-04-2016 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 Reactome: REACT_13 SRM_RS02420 94a4adfc58238472117bb403cb1d7f48 870 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 844 857 4.3E-23 T 22-04-2016 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 Reactome: REACT_13 SRM_RS02420 94a4adfc58238472117bb403cb1d7f48 870 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 537 555 4.3E-23 T 22-04-2016 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 Reactome: REACT_13 SRM_RS02420 94a4adfc58238472117bb403cb1d7f48 870 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 557 569 4.3E-23 T 22-04-2016 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 Reactome: REACT_13 SRM_RS02420 94a4adfc58238472117bb403cb1d7f48 870 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 666 679 4.3E-23 T 22-04-2016 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 Reactome: REACT_13 SRM_RS02420 94a4adfc58238472117bb403cb1d7f48 870 SUPERFAMILY SSF51419 509 756 5.72E-52 T 22-04-2016 IPR029066 PLP-binding barrel SRM_RS02420 94a4adfc58238472117bb403cb1d7f48 870 Gene3D G3DSA:2.40.37.10 744 865 2.9E-40 T 22-04-2016 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 Reactome: REACT_13 SRM_RS02420 94a4adfc58238472117bb403cb1d7f48 870 Pfam PF00696 Amino acid kinase family 9 295 1.4E-50 T 22-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 SRM_RS02420 94a4adfc58238472117bb403cb1d7f48 870 SUPERFAMILY SSF53633 9 308 2.09E-60 T 22-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 SRM_RS02420 94a4adfc58238472117bb403cb1d7f48 870 PANTHER PTHR11482 482 865 4.7E-120 T 22-04-2016 SRM_RS02420 94a4adfc58238472117bb403cb1d7f48 870 ProSitePatterns PS00878 Orn/DAP/Arg decarboxylases family 2 pyridoxal-P attachment site. 537 555 - T 22-04-2016 IPR022653 Orn/DAP/Arg decarboxylase 2, pyridoxal-phosphate binding site Reactome: REACT_13 SRM_RS02420 94a4adfc58238472117bb403cb1d7f48 870 SUPERFAMILY SSF50621 735 865 4.19E-43 T 22-04-2016 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 Reactome: REACT_13 SRM_RS02420 94a4adfc58238472117bb403cb1d7f48 870 PIRSF PIRSF036459 2 869 4.3E-261 T 22-04-2016 IPR011246 Bifunctional diaminopimelate decarboxylase/aspartate kinase SRM_RS02420 94a4adfc58238472117bb403cb1d7f48 870 TIGRFAM TIGR01048 lysA: diaminopimelate decarboxylase 508 865 4.2E-94 T 22-04-2016 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 SRM_RS02420 94a4adfc58238472117bb403cb1d7f48 870 Pfam PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain 531 754 1.2E-40 T 22-04-2016 IPR022644 Orn/DAP/Arg decarboxylase 2, N-terminal GO:0003824 Reactome: REACT_13 SRM_RS02420 94a4adfc58238472117bb403cb1d7f48 870 SUPERFAMILY SSF55021 393 466 8.39E-11 T 22-04-2016 SRM_RS02420 94a4adfc58238472117bb403cb1d7f48 870 Gene3D G3DSA:3.40.1160.10 8 58 4.0E-58 T 22-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 SRM_RS02420 94a4adfc58238472117bb403cb1d7f48 870 Gene3D G3DSA:3.40.1160.10 114 309 4.0E-58 T 22-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 SRM_RS02420 94a4adfc58238472117bb403cb1d7f48 870 ProSitePatterns PS00324 Aspartokinase signature. 11 19 - T 22-04-2016 IPR018042 Aspartate kinase, conserved site GO:0004072|GO:0008652 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|UniPathway: UPA00034|UniPathway: UPA00050|UniPathway: UPA00051 SRM_RS02420 94a4adfc58238472117bb403cb1d7f48 870 Pfam PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain 759 864 1.8E-16 T 22-04-2016 IPR022643 Orn/DAP/Arg decarboxylase 2, C-terminal GO:0003824 Reactome: REACT_13 SRM_RS10170 a4d6a6220eab5f0ee2867af384472467 61 ProSitePatterns PS01067 Protein secE/sec61-gamma signature. 7 35 - T 22-04-2016 IPR001901 Protein translocase complex, SecE/Sec61-gamma subunit GO:0006605|GO:0006886|GO:0016020 SRM_RS10170 a4d6a6220eab5f0ee2867af384472467 61 Pfam PF00584 SecE/Sec61-gamma subunits of protein translocation complex 6 58 8.9E-18 T 22-04-2016 IPR001901 Protein translocase complex, SecE/Sec61-gamma subunit GO:0006605|GO:0006886|GO:0016020 SRM_RS10170 a4d6a6220eab5f0ee2867af384472467 61 Hamap MF_00422 Protein translocase subunit SecE [secE]. 2 57 11.697 T 22-04-2016 IPR022943 Preprotein translocase subunit SecE SRM_RS10170 a4d6a6220eab5f0ee2867af384472467 61 Gene3D G3DSA:1.20.5.1030 4 58 9.7E-18 T 22-04-2016 SRM_RS10170 a4d6a6220eab5f0ee2867af384472467 61 TIGRFAM TIGR00964 secE_bact: preprotein translocase, SecE subunit 5 58 7.0E-17 T 22-04-2016 IPR005807 SecE subunit of protein translocation complex GO:0009306|GO:0015450|GO:0016021 SRM_RS06575 a4c9bb461db1455f19270b15c19445b0 274 PANTHER PTHR10804 1 251 2.0E-97 T 22-04-2016 SRM_RS06575 a4c9bb461db1455f19270b15c19445b0 274 PRINTS PR00599 Methionine aminopeptidase-1 signature 93 109 3.7E-20 T 22-04-2016 IPR001714 Peptidase M24, methionine aminopeptidase SRM_RS06575 a4c9bb461db1455f19270b15c19445b0 274 PRINTS PR00599 Methionine aminopeptidase-1 signature 71 84 3.7E-20 T 22-04-2016 IPR001714 Peptidase M24, methionine aminopeptidase SRM_RS06575 a4c9bb461db1455f19270b15c19445b0 274 PRINTS PR00599 Methionine aminopeptidase-1 signature 194 206 3.7E-20 T 22-04-2016 IPR001714 Peptidase M24, methionine aminopeptidase SRM_RS06575 a4c9bb461db1455f19270b15c19445b0 274 PRINTS PR00599 Methionine aminopeptidase-1 signature 163 175 3.7E-20 T 22-04-2016 IPR001714 Peptidase M24, methionine aminopeptidase SRM_RS06575 a4c9bb461db1455f19270b15c19445b0 274 Hamap MF_01974 Methionine aminopeptidase [map]. 2 252 36.272 T 22-04-2016 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 GO:0004177|GO:0006508|GO:0008235 SRM_RS06575 a4c9bb461db1455f19270b15c19445b0 274 TIGRFAM TIGR00500 met_pdase_I: methionine aminopeptidase, type I 3 250 1.5E-85 T 22-04-2016 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 GO:0004177|GO:0006508|GO:0008235 SRM_RS06575 a4c9bb461db1455f19270b15c19445b0 274 Gene3D G3DSA:3.90.230.10 4 252 2.0E-78 T 22-04-2016 IPR000994 Peptidase M24, structural domain SRM_RS06575 a4c9bb461db1455f19270b15c19445b0 274 SUPERFAMILY SSF55920 4 251 2.22E-76 T 22-04-2016 IPR000994 Peptidase M24, structural domain SRM_RS06575 a4c9bb461db1455f19270b15c19445b0 274 Pfam PF00557 Metallopeptidase family M24 12 242 3.2E-47 T 22-04-2016 IPR000994 Peptidase M24, structural domain SRM_RS06575 a4c9bb461db1455f19270b15c19445b0 274 PANTHER PTHR10804:SF41 1 251 2.0E-97 T 22-04-2016 SRM_RS00765 51127792b3df517549cbebbd30313053 224 PANTHER PTHR11749 1 220 1.5E-101 T 22-04-2016 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723 SRM_RS00765 51127792b3df517549cbebbd30313053 224 PIRSF PIRSF001461 1 223 6.7E-83 T 22-04-2016 IPR026019 Ribulose-phosphate 3-epimerase GO:0004750|GO:0006098 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723 SRM_RS00765 51127792b3df517549cbebbd30313053 224 ProSitePatterns PS01085 Ribulose-phosphate 3-epimerase family signature 1. 31 45 - T 22-04-2016 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723 SRM_RS00765 51127792b3df517549cbebbd30313053 224 SUPERFAMILY SSF51366 3 219 1.12E-65 T 22-04-2016 IPR011060 Ribulose-phosphate binding barrel GO:0003824|GO:0008152 SRM_RS00765 51127792b3df517549cbebbd30313053 224 Pfam PF00834 Ribulose-phosphate 3 epimerase family 4 203 3.3E-75 T 22-04-2016 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723 SRM_RS00765 51127792b3df517549cbebbd30313053 224 ProSitePatterns PS01086 Ribulose-phosphate 3-epimerase family signature 2. 136 158 - T 22-04-2016 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723 SRM_RS00765 51127792b3df517549cbebbd30313053 224 Gene3D G3DSA:3.20.20.70 2 220 6.6E-83 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 SRM_RS00765 51127792b3df517549cbebbd30313053 224 TIGRFAM TIGR01163 rpe: ribulose-phosphate 3-epimerase 4 216 1.4E-79 T 22-04-2016 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723 SRM_RS06975 53cd5350eff58d1d8b14a37ad1718685 820 Gene3D G3DSA:2.130.10.130 187 283 2.0E-9 T 22-04-2016 SRM_RS06975 53cd5350eff58d1d8b14a37ad1718685 820 Gene3D G3DSA:2.130.10.130 72 169 5.2E-6 T 22-04-2016 SRM_RS06975 53cd5350eff58d1d8b14a37ad1718685 820 Gene3D G3DSA:2.130.10.130 331 384 2.0E-9 T 22-04-2016 SRM_RS06975 53cd5350eff58d1d8b14a37ad1718685 820 PANTHER PTHR38787 441 813 2.5E-106 T 22-04-2016 SRM_RS06975 53cd5350eff58d1d8b14a37ad1718685 820 SMART SM00191 109 151 13.0 T 22-04-2016 IPR013519 Integrin alpha beta-propellor Reactome: REACT_13552 SRM_RS06975 53cd5350eff58d1d8b14a37ad1718685 820 SMART SM00191 264 341 13.0 T 22-04-2016 IPR013519 Integrin alpha beta-propellor Reactome: REACT_13552 SRM_RS06975 53cd5350eff58d1d8b14a37ad1718685 820 SMART SM00191 214 258 11.0 T 22-04-2016 IPR013519 Integrin alpha beta-propellor Reactome: REACT_13552 SRM_RS06975 53cd5350eff58d1d8b14a37ad1718685 820 Pfam PF08309 LVIVD repeat 753 776 0.39 T 22-04-2016 IPR013211 LVIVD SRM_RS06975 53cd5350eff58d1d8b14a37ad1718685 820 Pfam PF08309 LVIVD repeat 480 504 0.75 T 22-04-2016 IPR013211 LVIVD SRM_RS06975 53cd5350eff58d1d8b14a37ad1718685 820 TIGRFAM TIGR04312 choice_anch_B: choice-of-anchor B domain 432 814 2.4E-139 T 22-04-2016 IPR027589 Choice-of-anchor B domain SRM_RS06975 53cd5350eff58d1d8b14a37ad1718685 820 Pfam PF14312 FG-GAP repeat 251 294 1.2E-5 T 22-04-2016 IPR013517 FG-GAP repeat Reactome: REACT_13552 SRM_RS06975 53cd5350eff58d1d8b14a37ad1718685 820 Pfam PF14312 FG-GAP repeat 96 137 1.2E-6 T 22-04-2016 IPR013517 FG-GAP repeat Reactome: REACT_13552 SRM_RS06975 53cd5350eff58d1d8b14a37ad1718685 820 SUPERFAMILY SSF69318 49 384 2.2E-10 T 22-04-2016 SRM_RS06975 53cd5350eff58d1d8b14a37ad1718685 820 SUPERFAMILY SSF50998 297 605 1.1E-5 T 22-04-2016 IPR011047 Quinoprotein alcohol dehydrogenase-like superfamily SRM_RS00735 f9384bb69f14604df806973bf0e3b713 524 PANTHER PTHR30050:SF2 183 522 3.1E-188 T 22-04-2016 SRM_RS00735 f9384bb69f14604df806973bf0e3b713 524 PANTHER PTHR30050:SF2 4 111 3.1E-188 T 22-04-2016 SRM_RS00735 f9384bb69f14604df806973bf0e3b713 524 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 479 498 2.8E-45 T 22-04-2016 IPR020591 Chromosomal replication control, initiator DnaA-like SRM_RS00735 f9384bb69f14604df806973bf0e3b713 524 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 283 297 2.8E-45 T 22-04-2016 IPR020591 Chromosomal replication control, initiator DnaA-like SRM_RS00735 f9384bb69f14604df806973bf0e3b713 524 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 251 265 2.8E-45 T 22-04-2016 IPR020591 Chromosomal replication control, initiator DnaA-like SRM_RS00735 f9384bb69f14604df806973bf0e3b713 524 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 219 239 2.8E-45 T 22-04-2016 IPR020591 Chromosomal replication control, initiator DnaA-like SRM_RS00735 f9384bb69f14604df806973bf0e3b713 524 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 317 344 2.8E-45 T 22-04-2016 IPR020591 Chromosomal replication control, initiator DnaA-like SRM_RS00735 f9384bb69f14604df806973bf0e3b713 524 ProSitePatterns PS01008 DnaA protein signature. 479 498 - T 22-04-2016 IPR018312 Chromosomal replication control, initiator DnaA, conserved site GO:0003677|GO:0003688|GO:0005524|GO:0006270|GO:0006275 SRM_RS00735 f9384bb69f14604df806973bf0e3b713 524 Gene3D G3DSA:1.10.1750.10 420 520 1.2E-35 T 22-04-2016 IPR013159 Chromosomal replication initiator, DnaA C-terminal GO:0005524|GO:0006270|GO:0006275|GO:0043565 SRM_RS00735 f9384bb69f14604df806973bf0e3b713 524 TIGRFAM TIGR00362 DnaA: chromosomal replication initiator protein DnaA 9 519 4.9E-158 T 22-04-2016 IPR001957 Chromosomal replication control, initiator DnaA GO:0003677|GO:0003688|GO:0005524|GO:0006270|GO:0006275 SRM_RS00735 f9384bb69f14604df806973bf0e3b713 524 SMART SM00760 429 498 2.2E-33 T 22-04-2016 IPR013159 Chromosomal replication initiator, DnaA C-terminal GO:0005524|GO:0006270|GO:0006275|GO:0043565 SRM_RS00735 f9384bb69f14604df806973bf0e3b713 524 Gene3D G3DSA:3.40.50.300 179 350 5.0E-56 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SRM_RS00735 f9384bb69f14604df806973bf0e3b713 524 SUPERFAMILY SSF48295 416 520 6.8E-34 T 22-04-2016 IPR010921 Trp repressor/replication initiator GO:0043565 SRM_RS00735 f9384bb69f14604df806973bf0e3b713 524 SUPERFAMILY SSF52540 185 396 3.02E-42 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SRM_RS00735 f9384bb69f14604df806973bf0e3b713 524 Pfam PF08299 Bacterial dnaA protein helix-turn-helix 430 497 2.8E-28 T 22-04-2016 IPR013159 Chromosomal replication initiator, DnaA C-terminal GO:0005524|GO:0006270|GO:0006275|GO:0043565 SRM_RS00735 f9384bb69f14604df806973bf0e3b713 524 Hamap MF_00377 Chromosomal replication initiator protein DnaA [dnaA]. 6 520 31.517 T 22-04-2016 IPR001957 Chromosomal replication control, initiator DnaA GO:0003677|GO:0003688|GO:0005524|GO:0006270|GO:0006275 SRM_RS00735 f9384bb69f14604df806973bf0e3b713 524 Pfam PF11638 DnaA N-terminal domain 8 70 9.0E-17 T 22-04-2016 IPR024633 DnaA N-terminal domain SRM_RS00735 f9384bb69f14604df806973bf0e3b713 524 PANTHER PTHR30050 183 522 3.1E-188 T 22-04-2016 SRM_RS00735 f9384bb69f14604df806973bf0e3b713 524 PANTHER PTHR30050 4 111 3.1E-188 T 22-04-2016 SRM_RS00735 f9384bb69f14604df806973bf0e3b713 524 Pfam PF00308 Bacterial dnaA protein 185 402 7.4E-88 T 22-04-2016 IPR013317 Chromosomal replication initiator protein DnaA SRM_RS00735 f9384bb69f14604df806973bf0e3b713 524 SMART SM00382 218 348 1.2E-8 T 22-04-2016 IPR003593 AAA+ ATPase domain SRM_RS00735 f9384bb69f14604df806973bf0e3b713 524 Gene3D G3DSA:1.10.8.60 353 419 2.8E-29 T 22-04-2016 SRM_RS03800 0ae2f57e7c83bc0908fc04ef64be3a54 232 PANTHER PTHR10788 9 230 1.4E-26 T 22-04-2016 SRM_RS03800 0ae2f57e7c83bc0908fc04ef64be3a54 232 SUPERFAMILY SSF56784 9 232 2.07E-40 T 22-04-2016 IPR023214 HAD-like domain SRM_RS03800 0ae2f57e7c83bc0908fc04ef64be3a54 232 Pfam PF02358 Trehalose-phosphatase 11 211 9.9E-38 T 22-04-2016 IPR003337 Trehalose-phosphatase GO:0003824|GO:0005992 SRM_RS03800 0ae2f57e7c83bc0908fc04ef64be3a54 232 TIGRFAM TIGR00685 T6PP: trehalose-phosphatase 8 230 1.5E-40 T 22-04-2016 IPR003337 Trehalose-phosphatase GO:0003824|GO:0005992 SRM_RS03800 0ae2f57e7c83bc0908fc04ef64be3a54 232 Gene3D G3DSA:3.40.50.1000 9 80 2.4E-44 T 22-04-2016 IPR023214 HAD-like domain SRM_RS03800 0ae2f57e7c83bc0908fc04ef64be3a54 232 Gene3D G3DSA:3.40.50.1000 153 231 2.4E-44 T 22-04-2016 IPR023214 HAD-like domain SRM_RS03800 0ae2f57e7c83bc0908fc04ef64be3a54 232 PANTHER PTHR10788:SF6 9 230 1.4E-26 T 22-04-2016 SRM_RS03800 0ae2f57e7c83bc0908fc04ef64be3a54 232 TIGRFAM TIGR01484 HAD-SF-IIB: HAD hydrolase, family IIB 9 195 4.2E-17 T 22-04-2016 IPR006379 HAD-superfamily hydrolase, subfamily IIB Reactome: REACT_17015 SRM_RS09340 f9d3b6e93a820f08a572cdf51b5438bc 469 Gene3D G3DSA:1.10.40.30 409 466 1.9E-19 T 22-04-2016 SRM_RS09340 f9d3b6e93a820f08a572cdf51b5438bc 469 Pfam PF10415 Fumarase C C-terminus 409 461 1.5E-17 T 22-04-2016 IPR018951 Fumarase C, C-terminal GO:0006099|GO:0016829 KEGG: 00020+4.2.1.2|KEGG: 00620+4.2.1.2|KEGG: 00720+4.2.1.2|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7384|UniPathway: UPA00223 SRM_RS09340 f9d3b6e93a820f08a572cdf51b5438bc 469 Hamap MF_00743 Fumarate hydratase class II [fumC]. 5 462 75.041 T 22-04-2016 IPR005677 Fumarate hydratase, class II GO:0004333|GO:0006106|GO:0045239 KEGG: 00020+4.2.1.2|KEGG: 00620+4.2.1.2|KEGG: 00720+4.2.1.2|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7384|UniPathway: UPA00223 SRM_RS09340 f9d3b6e93a820f08a572cdf51b5438bc 469 Pfam PF00206 Lyase 13 342 1.9E-97 T 22-04-2016 IPR022761 Fumarate lyase, N-terminal SRM_RS09340 f9d3b6e93a820f08a572cdf51b5438bc 469 Gene3D G3DSA:1.10.275.10 4 138 7.9E-57 T 22-04-2016 IPR024083 Fumarase/histidase, N-terminal SRM_RS09340 f9d3b6e93a820f08a572cdf51b5438bc 469 PANTHER PTHR11444 1 462 1.2E-201 T 22-04-2016 IPR000362 Fumarate lyase family SRM_RS09340 f9d3b6e93a820f08a572cdf51b5438bc 469 PRINTS PR00145 Argininosuccinate lyase family signature 133 155 8.97E-7 T 22-04-2016 SRM_RS09340 f9d3b6e93a820f08a572cdf51b5438bc 469 PRINTS PR00145 Argininosuccinate lyase family signature 317 333 8.97E-7 T 22-04-2016 SRM_RS09340 f9d3b6e93a820f08a572cdf51b5438bc 469 PRINTS PR00145 Argininosuccinate lyase family signature 175 195 8.97E-7 T 22-04-2016 SRM_RS09340 f9d3b6e93a820f08a572cdf51b5438bc 469 PANTHER PTHR11444:SF1 1 462 1.2E-201 T 22-04-2016 SRM_RS09340 f9d3b6e93a820f08a572cdf51b5438bc 469 ProSitePatterns PS00163 Fumarate lyases signature. 317 326 - T 22-04-2016 IPR020557 Fumarate lyase, conserved site GO:0003824 SRM_RS09340 f9d3b6e93a820f08a572cdf51b5438bc 469 PRINTS PR00149 Fumarate lyase superfamily signature 134 152 5.89E-31 T 22-04-2016 IPR000362 Fumarate lyase family SRM_RS09340 f9d3b6e93a820f08a572cdf51b5438bc 469 PRINTS PR00149 Fumarate lyase superfamily signature 271 298 5.89E-31 T 22-04-2016 IPR000362 Fumarate lyase family SRM_RS09340 f9d3b6e93a820f08a572cdf51b5438bc 469 PRINTS PR00149 Fumarate lyase superfamily signature 317 333 5.89E-31 T 22-04-2016 IPR000362 Fumarate lyase family SRM_RS09340 f9d3b6e93a820f08a572cdf51b5438bc 469 PRINTS PR00149 Fumarate lyase superfamily signature 180 198 5.89E-31 T 22-04-2016 IPR000362 Fumarate lyase family SRM_RS09340 f9d3b6e93a820f08a572cdf51b5438bc 469 Gene3D G3DSA:1.20.200.10 139 403 5.5E-92 T 22-04-2016 SRM_RS09340 f9d3b6e93a820f08a572cdf51b5438bc 469 SUPERFAMILY SSF48557 4 460 2.36E-139 T 22-04-2016 IPR008948 L-Aspartase-like GO:0003824 SRM_RS07625 381f2c6f2a1b4ad480c73b6e1da29812 462 PANTHER PTHR30486:SF5 103 461 5.8E-88 T 22-04-2016 SRM_RS07625 381f2c6f2a1b4ad480c73b6e1da29812 462 Pfam PF00437 Type II/IV secretion system protein 203 379 5.4E-33 T 22-04-2016 IPR001482 Type II secretion system protein E GO:0005524|GO:0006810 SRM_RS07625 381f2c6f2a1b4ad480c73b6e1da29812 462 ProSitePatterns PS00662 Bacterial type II secretion system protein E signature. 307 321 - T 22-04-2016 IPR001482 Type II secretion system protein E GO:0005524|GO:0006810 SRM_RS07625 381f2c6f2a1b4ad480c73b6e1da29812 462 PANTHER PTHR30486 103 461 5.8E-88 T 22-04-2016 SRM_RS07625 381f2c6f2a1b4ad480c73b6e1da29812 462 SUPERFAMILY SSF52540 99 451 6.61E-47 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SRM_RS07625 381f2c6f2a1b4ad480c73b6e1da29812 462 Gene3D G3DSA:3.40.50.300 216 456 1.7E-52 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SRM_RS11575 b8846de69e2f3f66acaa29e4537571ba 690 SUPERFAMILY SSF82171 44 424 1.31E-50 T 22-04-2016 SRM_RS11575 b8846de69e2f3f66acaa29e4537571ba 690 Pfam PF00326 Prolyl oligopeptidase family 476 683 3.3E-56 T 22-04-2016 IPR001375 Peptidase S9, prolyl oligopeptidase, catalytic domain GO:0006508|GO:0008236 SRM_RS11575 b8846de69e2f3f66acaa29e4537571ba 690 SUPERFAMILY SSF53474 431 683 3.42E-67 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold SRM_RS11575 b8846de69e2f3f66acaa29e4537571ba 690 Gene3D G3DSA:2.130.10.10 36 406 7.2E-62 T 22-04-2016 IPR015943 WD40/YVTN repeat-like-containing domain GO:0005515 SRM_RS11575 b8846de69e2f3f66acaa29e4537571ba 690 Gene3D G3DSA:3.40.50.1820 430 683 1.1E-66 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold SRM_RS11575 b8846de69e2f3f66acaa29e4537571ba 690 PANTHER PTHR11731:SF90 47 683 3.0E-114 T 22-04-2016 SRM_RS11575 b8846de69e2f3f66acaa29e4537571ba 690 PANTHER PTHR11731 47 683 3.0E-114 T 22-04-2016 SRM_RS11575 b8846de69e2f3f66acaa29e4537571ba 690 Pfam PF07676 WD40-like Beta Propeller Repeat 216 247 2.5E-5 T 22-04-2016 IPR011659 WD40-like Beta Propeller SRM_RS11575 b8846de69e2f3f66acaa29e4537571ba 690 Pfam PF07676 WD40-like Beta Propeller Repeat 88 116 0.17 T 22-04-2016 IPR011659 WD40-like Beta Propeller SRM_RS11575 b8846de69e2f3f66acaa29e4537571ba 690 Pfam PF07676 WD40-like Beta Propeller Repeat 268 308 1.0E-4 T 22-04-2016 IPR011659 WD40-like Beta Propeller SRM_RS12605 4c8af465112b5d7ebfbe48d03057665b 468 SMART SM00357 106 172 5.0E-21 T 22-04-2016 IPR011129 Cold shock protein GO:0003676 SRM_RS12605 4c8af465112b5d7ebfbe48d03057665b 468 SMART SM00959 5 46 6.5E-15 T 22-04-2016 IPR011112 Rho termination factor, N-terminal GO:0006353 SRM_RS12605 4c8af465112b5d7ebfbe48d03057665b 468 Pfam PF07498 Rho termination factor, N-terminal domain 6 45 7.9E-16 T 22-04-2016 IPR011112 Rho termination factor, N-terminal GO:0006353 SRM_RS12605 4c8af465112b5d7ebfbe48d03057665b 468 Gene3D G3DSA:3.40.50.300 185 467 3.3E-92 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SRM_RS12605 4c8af465112b5d7ebfbe48d03057665b 468 PANTHER PTHR15184 33 468 2.1E-164 T 22-04-2016 SRM_RS12605 4c8af465112b5d7ebfbe48d03057665b 468 SUPERFAMILY SSF52540 145 421 4.8E-62 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SRM_RS12605 4c8af465112b5d7ebfbe48d03057665b 468 TIGRFAM TIGR00767 rho: transcription termination factor Rho 2 468 3.1E-185 T 22-04-2016 IPR004665 Transcription termination factor Rho GO:0003723|GO:0005524|GO:0006353|GO:0008186 SRM_RS12605 4c8af465112b5d7ebfbe48d03057665b 468 SMART SM00382 221 438 6.6E-5 T 22-04-2016 IPR003593 AAA+ ATPase domain SRM_RS12605 4c8af465112b5d7ebfbe48d03057665b 468 Hamap MF_01884 Transcription termination factor Rho [rho]. 1 468 197.112 T 22-04-2016 IPR004665 Transcription termination factor Rho GO:0003723|GO:0005524|GO:0006353|GO:0008186 SRM_RS12605 4c8af465112b5d7ebfbe48d03057665b 468 SUPERFAMILY SSF68912 1 45 5.89E-11 T 22-04-2016 IPR011112 Rho termination factor, N-terminal GO:0006353 SRM_RS12605 4c8af465112b5d7ebfbe48d03057665b 468 Pfam PF07497 Rho termination factor, RNA-binding domain 106 178 3.4E-31 T 22-04-2016 IPR011113 Rho termination factor, RNA-binding GO:0003723|GO:0006353 SRM_RS12605 4c8af465112b5d7ebfbe48d03057665b 468 SUPERFAMILY SSF50249 105 178 1.33E-26 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold SRM_RS12605 4c8af465112b5d7ebfbe48d03057665b 468 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 209 414 6.6E-18 T 22-04-2016 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 SRM_RS12605 4c8af465112b5d7ebfbe48d03057665b 468 PANTHER PTHR15184:SF34 33 468 2.1E-164 T 22-04-2016 SRM_RS12605 4c8af465112b5d7ebfbe48d03057665b 468 Gene3D G3DSA:2.40.50.140 1 45 4.4E-48 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold SRM_RS12605 4c8af465112b5d7ebfbe48d03057665b 468 Gene3D G3DSA:2.40.50.140 100 178 4.4E-48 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold SRM_RS05985 3831053d48eebbaad8e63df73c91990b 538 Gene3D G3DSA:2.130.10.140 313 407 8.5E-17 T 22-04-2016 SRM_RS05985 3831053d48eebbaad8e63df73c91990b 538 Gene3D G3DSA:2.130.10.140 100 252 8.5E-17 T 22-04-2016 SRM_RS05985 3831053d48eebbaad8e63df73c91990b 538 Pfam PF13860 FlgD Ig-like domain 464 525 2.4E-11 T 22-04-2016 IPR025965 FlgD Ig-like domain SRM_RS05985 3831053d48eebbaad8e63df73c91990b 538 SUPERFAMILY SSF110296 81 250 1.22E-9 T 22-04-2016 SRM_RS05985 3831053d48eebbaad8e63df73c91990b 538 SUPERFAMILY SSF110296 316 367 1.22E-9 T 22-04-2016 SRM_RS12775 519799ca898a7a7a3952a469cf3f2946 446 SUPERFAMILY SSF51735 229 367 5.92E-27 T 22-04-2016 IPR016040 NAD(P)-binding domain SRM_RS12775 519799ca898a7a7a3952a469cf3f2946 446 SUPERFAMILY SSF51735 1 149 6.14E-30 T 22-04-2016 IPR016040 NAD(P)-binding domain SRM_RS12775 519799ca898a7a7a3952a469cf3f2946 446 PRINTS PR00335 TrkA potassium uptake protein signature 18 32 1.1E-13 T 22-04-2016 IPR006036 Potassium uptake protein TrkA GO:0005886|GO:0006813|GO:0015079 SRM_RS12775 519799ca898a7a7a3952a469cf3f2946 446 PRINTS PR00335 TrkA potassium uptake protein signature 72 86 1.1E-13 T 22-04-2016 IPR006036 Potassium uptake protein TrkA GO:0005886|GO:0006813|GO:0015079 SRM_RS12775 519799ca898a7a7a3952a469cf3f2946 446 PRINTS PR00335 TrkA potassium uptake protein signature 48 58 1.1E-13 T 22-04-2016 IPR006036 Potassium uptake protein TrkA GO:0005886|GO:0006813|GO:0015079 SRM_RS12775 519799ca898a7a7a3952a469cf3f2946 446 PRINTS PR00335 TrkA potassium uptake protein signature 2 16 1.1E-13 T 22-04-2016 IPR006036 Potassium uptake protein TrkA GO:0005886|GO:0006813|GO:0015079 SRM_RS12775 519799ca898a7a7a3952a469cf3f2946 446 PRINTS PR00335 TrkA potassium uptake protein signature 59 69 1.1E-13 T 22-04-2016 IPR006036 Potassium uptake protein TrkA GO:0005886|GO:0006813|GO:0015079 SRM_RS12775 519799ca898a7a7a3952a469cf3f2946 446 SUPERFAMILY SSF116726 136 217 1.96E-14 T 22-04-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 SRM_RS12775 519799ca898a7a7a3952a469cf3f2946 446 Pfam PF02254 TrkA-N domain 231 347 1.6E-19 T 22-04-2016 IPR003148 Regulator of K+ conductance, N-terminal GO:0006813 SRM_RS12775 519799ca898a7a7a3952a469cf3f2946 446 Pfam PF02254 TrkA-N domain 3 107 1.7E-24 T 22-04-2016 IPR003148 Regulator of K+ conductance, N-terminal GO:0006813 SRM_RS12775 519799ca898a7a7a3952a469cf3f2946 446 Gene3D G3DSA:3.40.50.720 229 369 3.0E-31 T 22-04-2016 IPR016040 NAD(P)-binding domain SRM_RS12775 519799ca898a7a7a3952a469cf3f2946 446 Gene3D G3DSA:3.40.50.720 1 149 1.0E-33 T 22-04-2016 IPR016040 NAD(P)-binding domain SRM_RS12775 519799ca898a7a7a3952a469cf3f2946 446 Pfam PF02080 TrkA-C domain 153 216 3.0E-14 T 22-04-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 SRM_RS12775 519799ca898a7a7a3952a469cf3f2946 446 Pfam PF02080 TrkA-C domain 377 444 1.9E-13 T 22-04-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 SRM_RS12775 519799ca898a7a7a3952a469cf3f2946 446 Gene3D G3DSA:3.30.70.1450 376 445 4.0E-9 T 22-04-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 SRM_RS12775 519799ca898a7a7a3952a469cf3f2946 446 Gene3D G3DSA:3.30.70.1450 150 219 9.1E-11 T 22-04-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 SRM_RS12775 519799ca898a7a7a3952a469cf3f2946 446 SUPERFAMILY SSF116726 368 444 1.7E-12 T 22-04-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 SRM_RS03850 216ba9b7538fc48348273cb2d526777e 301 Gene3D G3DSA:3.40.50.620 3 210 1.5E-55 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold SRM_RS03850 216ba9b7538fc48348273cb2d526777e 301 Gene3D G3DSA:3.40.50.620 243 251 1.5E-55 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold SRM_RS03850 216ba9b7538fc48348273cb2d526777e 301 Pfam PF01507 Phosphoadenosine phosphosulfate reductase family 29 256 6.9E-49 T 22-04-2016 IPR002500 Phosphoadenosine phosphosulphate reductase GO:0003824|GO:0008152 SRM_RS03850 216ba9b7538fc48348273cb2d526777e 301 SUPERFAMILY SSF52402 7 209 2.21E-70 T 22-04-2016 SRM_RS03850 216ba9b7538fc48348273cb2d526777e 301 PANTHER PTHR23293 244 301 1.3E-74 T 22-04-2016 SRM_RS03850 216ba9b7538fc48348273cb2d526777e 301 PANTHER PTHR23293 178 211 1.3E-74 T 22-04-2016 SRM_RS03850 216ba9b7538fc48348273cb2d526777e 301 PANTHER PTHR23293 1 158 1.3E-74 T 22-04-2016 SRM_RS03850 216ba9b7538fc48348273cb2d526777e 301 PIRSF PIRSF002936 1 301 2.1E-134 T 22-04-2016 IPR011784 Sulphate adenylyltransferase, small subunit GO:0004781|GO:0019419 KEGG: 00230+2.7.7.4|KEGG: 00261+2.7.7.4|KEGG: 00450+2.7.7.4|KEGG: 00920+2.7.7.4|MetaCyc: PWY-5278|MetaCyc: PWY-5340|MetaCyc: PWY-6683|MetaCyc: PWY-6932|UniPathway: UPA00140 SRM_RS03850 216ba9b7538fc48348273cb2d526777e 301 PANTHER PTHR23293:SF6 244 301 1.3E-74 T 22-04-2016 SRM_RS03850 216ba9b7538fc48348273cb2d526777e 301 PANTHER PTHR23293:SF6 178 211 1.3E-74 T 22-04-2016 SRM_RS03850 216ba9b7538fc48348273cb2d526777e 301 PANTHER PTHR23293:SF6 1 158 1.3E-74 T 22-04-2016 SRM_RS03850 216ba9b7538fc48348273cb2d526777e 301 TIGRFAM TIGR02039 CysD: sulfate adenylyltransferase, small subunit 9 301 1.3E-129 T 22-04-2016 IPR011784 Sulphate adenylyltransferase, small subunit GO:0004781|GO:0019419 KEGG: 00230+2.7.7.4|KEGG: 00261+2.7.7.4|KEGG: 00450+2.7.7.4|KEGG: 00920+2.7.7.4|MetaCyc: PWY-5278|MetaCyc: PWY-5340|MetaCyc: PWY-6683|MetaCyc: PWY-6932|UniPathway: UPA00140 SRM_RS05405 d89637370f082d413dbc0ebf7ad9eafc 696 SMART SM00283 383 644 1.1E-76 T 22-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 SRM_RS05405 d89637370f082d413dbc0ebf7ad9eafc 696 Gene3D G3DSA:1.10.287.950 397 614 1.9E-55 T 22-04-2016 SRM_RS05405 d89637370f082d413dbc0ebf7ad9eafc 696 SUPERFAMILY SSF58104 336 645 5.06E-76 T 22-04-2016 SRM_RS05405 d89637370f082d413dbc0ebf7ad9eafc 696 PANTHER PTHR32089 166 273 6.7E-102 T 22-04-2016 SRM_RS05405 d89637370f082d413dbc0ebf7ad9eafc 696 PANTHER PTHR32089 351 647 6.7E-102 T 22-04-2016 SRM_RS05405 d89637370f082d413dbc0ebf7ad9eafc 696 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 442 643 6.7E-52 T 22-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 SRM_RS05405 d89637370f082d413dbc0ebf7ad9eafc 696 SMART SM00304 241 291 3.6 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 SRM_RS05405 d89637370f082d413dbc0ebf7ad9eafc 696 SMART SM00304 316 368 2.3E-7 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 SRM_RS05405 d89637370f082d413dbc0ebf7ad9eafc 696 SMART SM00304 571 641 43.0 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 SRM_RS05405 d89637370f082d413dbc0ebf7ad9eafc 696 SMART SM00304 438 494 25.0 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 SRM_RS05405 d89637370f082d413dbc0ebf7ad9eafc 696 Pfam PF00672 HAMP domain 222 286 3.7E-8 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 SRM_RS07145 be27718bcbf66a7b38ad56ededb334d3 339 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 161 181 3.0E-33 T 22-04-2016 IPR006073 GTP binding domain GO:0005525 SRM_RS07145 be27718bcbf66a7b38ad56ededb334d3 339 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 210 225 3.0E-33 T 22-04-2016 IPR006073 GTP binding domain GO:0005525 SRM_RS07145 be27718bcbf66a7b38ad56ededb334d3 339 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 182 200 3.0E-33 T 22-04-2016 IPR006073 GTP binding domain GO:0005525 SRM_RS07145 be27718bcbf66a7b38ad56ededb334d3 339 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 227 245 3.0E-33 T 22-04-2016 IPR006073 GTP binding domain GO:0005525 SRM_RS07145 be27718bcbf66a7b38ad56ededb334d3 339 Pfam PF01018 GTP1/OBG 3 157 2.7E-56 T 22-04-2016 IPR006169 GTP1/OBG domain GO:0005525 SRM_RS07145 be27718bcbf66a7b38ad56ededb334d3 339 Hamap MF_01454 GTPase Obg [obg]. 2 329 45.476 T 22-04-2016 IPR014100 GTP-binding protein Obg/CgtA GO:0000287|GO:0003924|GO:0005525 SRM_RS07145 be27718bcbf66a7b38ad56ededb334d3 339 SUPERFAMILY SSF52540 151 328 6.92E-45 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SRM_RS07145 be27718bcbf66a7b38ad56ededb334d3 339 PANTHER PTHR11702 1 339 1.5E-145 T 22-04-2016 SRM_RS07145 be27718bcbf66a7b38ad56ededb334d3 339 TIGRFAM TIGR02729 Obg_CgtA: Obg family GTPase CgtA 3 328 2.5E-129 T 22-04-2016 IPR014100 GTP-binding protein Obg/CgtA GO:0000287|GO:0003924|GO:0005525 SRM_RS07145 be27718bcbf66a7b38ad56ededb334d3 339 Gene3D G3DSA:3.40.50.300 159 334 1.6E-48 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SRM_RS07145 be27718bcbf66a7b38ad56ededb334d3 339 Pfam PF01926 50S ribosome-binding GTPase 160 279 9.5E-23 T 22-04-2016 IPR006073 GTP binding domain GO:0005525 SRM_RS07145 be27718bcbf66a7b38ad56ededb334d3 339 SUPERFAMILY SSF82051 2 157 1.7E-50 T 22-04-2016 IPR006169 GTP1/OBG domain GO:0005525 SRM_RS07145 be27718bcbf66a7b38ad56ededb334d3 339 PANTHER PTHR11702:SF3 1 339 1.5E-145 T 22-04-2016 IPR014100 GTP-binding protein Obg/CgtA GO:0000287|GO:0003924|GO:0005525 SRM_RS07145 be27718bcbf66a7b38ad56ededb334d3 339 PIRSF PIRSF002401 1 338 4.1E-128 T 22-04-2016 IPR014100 GTP-binding protein Obg/CgtA GO:0000287|GO:0003924|GO:0005525 SRM_RS07145 be27718bcbf66a7b38ad56ededb334d3 339 Gene3D G3DSA:2.70.210.12 2 155 1.8E-53 T 22-04-2016 IPR006169 GTP1/OBG domain GO:0005525 SRM_RS03275 eb7f272cabc0cd8c09bf8a6d35e557c7 1071 SUPERFAMILY SSF82714 740 815 4.71E-14 T 22-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains SRM_RS03275 eb7f272cabc0cd8c09bf8a6d35e557c7 1071 SUPERFAMILY SSF82866 292 484 1.06E-37 T 22-04-2016 SRM_RS03275 eb7f272cabc0cd8c09bf8a6d35e557c7 1071 Pfam PF00873 AcrB/AcrD/AcrF family 7 1033 2.5E-167 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 SRM_RS03275 eb7f272cabc0cd8c09bf8a6d35e557c7 1071 SUPERFAMILY SSF82866 814 1039 5.62E-46 T 22-04-2016 SRM_RS03275 eb7f272cabc0cd8c09bf8a6d35e557c7 1071 PRINTS PR00702 Acriflavin resistance protein family signature 329 352 4.63E-23 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 SRM_RS03275 eb7f272cabc0cd8c09bf8a6d35e557c7 1071 PRINTS PR00702 Acriflavin resistance protein family signature 436 459 4.63E-23 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 SRM_RS03275 eb7f272cabc0cd8c09bf8a6d35e557c7 1071 PRINTS PR00702 Acriflavin resistance protein family signature 39 57 4.63E-23 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 SRM_RS03275 eb7f272cabc0cd8c09bf8a6d35e557c7 1071 PRINTS PR00702 Acriflavin resistance protein family signature 383 407 4.63E-23 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 SRM_RS03275 eb7f272cabc0cd8c09bf8a6d35e557c7 1071 SUPERFAMILY SSF82693 139 178 3.4E-11 T 22-04-2016 SRM_RS03275 eb7f272cabc0cd8c09bf8a6d35e557c7 1071 SUPERFAMILY SSF82693 266 322 3.4E-11 T 22-04-2016 SRM_RS03275 eb7f272cabc0cd8c09bf8a6d35e557c7 1071 PANTHER PTHR32063:SF33 1 1040 0.0 T 22-04-2016 SRM_RS03275 eb7f272cabc0cd8c09bf8a6d35e557c7 1071 Gene3D G3DSA:1.20.1640.10 287 485 3.7E-43 T 22-04-2016 SRM_RS03275 eb7f272cabc0cd8c09bf8a6d35e557c7 1071 PANTHER PTHR32063 1 1040 0.0 T 22-04-2016 SRM_RS03275 eb7f272cabc0cd8c09bf8a6d35e557c7 1071 SUPERFAMILY SSF82693 42 131 9.07E-20 T 22-04-2016 SRM_RS03275 eb7f272cabc0cd8c09bf8a6d35e557c7 1071 Gene3D G3DSA:3.30.2090.10 740 815 7.5E-13 T 22-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains SRM_RS03275 eb7f272cabc0cd8c09bf8a6d35e557c7 1071 Gene3D G3DSA:3.30.70.1430 43 139 1.2E-21 T 22-04-2016 SRM_RS03275 eb7f272cabc0cd8c09bf8a6d35e557c7 1071 Gene3D G3DSA:3.30.2090.10 178 264 7.2E-12 T 22-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains SRM_RS03275 eb7f272cabc0cd8c09bf8a6d35e557c7 1071 Gene3D G3DSA:1.10.3850.10 820 1038 6.4E-53 T 22-04-2016 SRM_RS03275 eb7f272cabc0cd8c09bf8a6d35e557c7 1071 SUPERFAMILY SSF82714 179 262 2.09E-12 T 22-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains SRM_RS12245 65a9490aa3e11531c2568b758328430e 322 PANTHER PTHR12553 1 155 1.2E-69 T 22-04-2016 SRM_RS12245 65a9490aa3e11531c2568b758328430e 322 PANTHER PTHR12553 186 302 1.2E-69 T 22-04-2016 SRM_RS12245 65a9490aa3e11531c2568b758328430e 322 Gene3D G3DSA:3.60.15.10 6 306 1.3E-75 T 22-04-2016 IPR001279 Metallo-beta-lactamase SRM_RS12245 65a9490aa3e11531c2568b758328430e 322 Pfam PF00753 Metallo-beta-lactamase superfamily 23 107 4.7E-12 T 22-04-2016 IPR001279 Metallo-beta-lactamase SRM_RS12245 65a9490aa3e11531c2568b758328430e 322 SUPERFAMILY SSF56281 5 306 8.39E-74 T 22-04-2016 IPR001279 Metallo-beta-lactamase SRM_RS12245 65a9490aa3e11531c2568b758328430e 322 TIGRFAM TIGR02651 RNase_Z: ribonuclease Z 6 305 2.7E-95 T 22-04-2016 IPR013471 Ribonuclease Z/BN GO:0016891|GO:0042779 SRM_RS12245 65a9490aa3e11531c2568b758328430e 322 Pfam PF12706 Beta-lactamase superfamily domain 205 273 1.1E-7 T 22-04-2016 IPR001279 Metallo-beta-lactamase SRM_RS12245 65a9490aa3e11531c2568b758328430e 322 Hamap MF_01818 Ribonuclease BN [rbn]. 3 306 36.39 T 22-04-2016 IPR013471 Ribonuclease Z/BN GO:0016891|GO:0042779 SRM_RS06285 0c5dfb728c1816d65687e16774fa0cd5 600 Gene3D G3DSA:1.20.1560.10 5 304 2.4E-24 T 22-04-2016 SRM_RS06285 0c5dfb728c1816d65687e16774fa0cd5 600 PANTHER PTHR24221:SF138 4 49 1.8E-103 T 22-04-2016 SRM_RS06285 0c5dfb728c1816d65687e16774fa0cd5 600 PANTHER PTHR24221:SF138 68 597 1.8E-103 T 22-04-2016 SRM_RS06285 0c5dfb728c1816d65687e16774fa0cd5 600 ProSitePatterns PS00211 ABC transporters family signature. 503 517 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 SRM_RS06285 0c5dfb728c1816d65687e16774fa0cd5 600 Pfam PF00664 ABC transporter transmembrane region 52 283 3.4E-15 T 22-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 SRM_RS06285 0c5dfb728c1816d65687e16774fa0cd5 600 SMART SM00382 388 577 2.8E-15 T 22-04-2016 IPR003593 AAA+ ATPase domain SRM_RS06285 0c5dfb728c1816d65687e16774fa0cd5 600 Pfam PF00005 ABC transporter 380 531 1.2E-29 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 SRM_RS06285 0c5dfb728c1816d65687e16774fa0cd5 600 PANTHER PTHR24221 4 49 1.8E-103 T 22-04-2016 SRM_RS06285 0c5dfb728c1816d65687e16774fa0cd5 600 PANTHER PTHR24221 68 597 1.8E-103 T 22-04-2016 SRM_RS06285 0c5dfb728c1816d65687e16774fa0cd5 600 Gene3D G3DSA:3.40.50.300 362 594 1.6E-67 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SRM_RS06285 0c5dfb728c1816d65687e16774fa0cd5 600 SUPERFAMILY SSF52540 354 597 1.23E-73 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SRM_RS06285 0c5dfb728c1816d65687e16774fa0cd5 600 SUPERFAMILY SSF90123 5 329 1.83E-28 T 22-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 SRM_RS14935 c5fe80bb75618dde26bd25121ed13e8f 301 Pfam PF04018 Domain of unknown function (DUF368) 18 256 2.3E-63 T 22-04-2016 IPR007163 Protein of unknown function DUF368 SRM_RS14935 c5fe80bb75618dde26bd25121ed13e8f 301 PANTHER PTHR37308 2 297 7.0E-45 T 22-04-2016 SRM_RS08650 b003728087fa97a2b7b771c86e14ab9b 384 SUPERFAMILY SSF48179 221 374 3.74E-56 T 22-04-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 SRM_RS08650 b003728087fa97a2b7b771c86e14ab9b 384 SUPERFAMILY SSF51735 44 221 5.92E-52 T 22-04-2016 IPR016040 NAD(P)-binding domain SRM_RS08650 b003728087fa97a2b7b771c86e14ab9b 384 PIRSF PIRSF000114 39 374 4.7E-104 T 22-04-2016 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|UniPathway: UPA00940 SRM_RS08650 b003728087fa97a2b7b771c86e14ab9b 384 Pfam PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus 222 362 1.1E-53 T 22-04-2016 IPR006109 Glycerol-3-phosphate dehydrogenase, NAD-dependent, C-terminal GO:0004367|GO:0005975|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|UniPathway: UPA00940 SRM_RS08650 b003728087fa97a2b7b771c86e14ab9b 384 Gene3D G3DSA:1.10.1040.10 226 368 7.0E-58 T 22-04-2016 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 SRM_RS08650 b003728087fa97a2b7b771c86e14ab9b 384 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 240 264 2.3E-41 T 22-04-2016 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|UniPathway: UPA00940 SRM_RS08650 b003728087fa97a2b7b771c86e14ab9b 384 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 47 64 2.3E-41 T 22-04-2016 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|UniPathway: UPA00940 SRM_RS08650 b003728087fa97a2b7b771c86e14ab9b 384 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 97 124 2.3E-41 T 22-04-2016 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|UniPathway: UPA00940 SRM_RS08650 b003728087fa97a2b7b771c86e14ab9b 384 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 215 239 2.3E-41 T 22-04-2016 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|UniPathway: UPA00940 SRM_RS08650 b003728087fa97a2b7b771c86e14ab9b 384 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 175 195 2.3E-41 T 22-04-2016 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|UniPathway: UPA00940 SRM_RS08650 b003728087fa97a2b7b771c86e14ab9b 384 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 280 297 2.3E-41 T 22-04-2016 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|UniPathway: UPA00940 SRM_RS08650 b003728087fa97a2b7b771c86e14ab9b 384 Pfam PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus 44 199 7.7E-48 T 22-04-2016 IPR011128 Glycerol-3-phosphate dehydrogenase, NAD-dependent, N-terminal GO:0016616|GO:0046168|GO:0051287|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|UniPathway: UPA00940 SRM_RS08650 b003728087fa97a2b7b771c86e14ab9b 384 Hamap MF_00394 Glycerol-3-phosphate dehydrogenase [NAD(P)+] [gpsA]. 43 364 36.623 T 22-04-2016 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|UniPathway: UPA00940 SRM_RS08650 b003728087fa97a2b7b771c86e14ab9b 384 ProSitePatterns PS00957 NAD-dependent glycerol-3-phosphate dehydrogenase signature. 230 251 - T 22-04-2016 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|UniPathway: UPA00940 SRM_RS08650 b003728087fa97a2b7b771c86e14ab9b 384 Gene3D G3DSA:3.40.50.720 41 225 1.7E-61 T 22-04-2016 IPR016040 NAD(P)-binding domain SRM_RS02250 f9d616086f524000a7adfb726c0cd4f1 700 Gene3D G3DSA:3.40.50.300 454 636 2.8E-43 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SRM_RS02250 f9d616086f524000a7adfb726c0cd4f1 700 Pfam PF00271 Helicase conserved C-terminal domain 470 586 2.4E-19 T 22-04-2016 IPR001650 Helicase, C-terminal SRM_RS02250 f9d616086f524000a7adfb726c0cd4f1 700 SMART SM00487 268 458 5.6E-33 T 22-04-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain SRM_RS02250 f9d616086f524000a7adfb726c0cd4f1 700 PANTHER PTHR24031 302 600 8.0E-121 T 22-04-2016 SRM_RS02250 f9d616086f524000a7adfb726c0cd4f1 700 PANTHER PTHR24031 624 687 8.0E-121 T 22-04-2016 SRM_RS02250 f9d616086f524000a7adfb726c0cd4f1 700 PANTHER PTHR24031 261 285 8.0E-121 T 22-04-2016 SRM_RS02250 f9d616086f524000a7adfb726c0cd4f1 700 TIGRFAM TIGR00643 recG: ATP-dependent DNA helicase RecG 29 663 3.4E-221 T 22-04-2016 IPR004609 ATP-dependent DNA helicase RecG GO:0004003|GO:0006281|GO:0006310 SRM_RS02250 f9d616086f524000a7adfb726c0cd4f1 700 SMART SM00490 503 587 1.2E-21 T 22-04-2016 IPR001650 Helicase, C-terminal SRM_RS02250 f9d616086f524000a7adfb726c0cd4f1 700 SUPERFAMILY SSF52540 188 452 3.11E-59 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SRM_RS02250 f9d616086f524000a7adfb726c0cd4f1 700 Gene3D G3DSA:2.40.50.140 47 143 1.3E-14 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold SRM_RS02250 f9d616086f524000a7adfb726c0cd4f1 700 SUPERFAMILY SSF50249 6 181 1.46E-33 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold SRM_RS02250 f9d616086f524000a7adfb726c0cd4f1 700 SUPERFAMILY SSF52540 451 652 3.5E-42 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SRM_RS02250 f9d616086f524000a7adfb726c0cd4f1 700 PANTHER PTHR24031:SF249 302 600 8.0E-121 T 22-04-2016 SRM_RS02250 f9d616086f524000a7adfb726c0cd4f1 700 PANTHER PTHR24031:SF249 624 687 8.0E-121 T 22-04-2016 SRM_RS02250 f9d616086f524000a7adfb726c0cd4f1 700 PANTHER PTHR24031:SF249 261 285 8.0E-121 T 22-04-2016 SRM_RS02250 f9d616086f524000a7adfb726c0cd4f1 700 Pfam PF00270 DEAD/DEAH box helicase 276 429 1.7E-15 T 22-04-2016 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 SRM_RS02250 f9d616086f524000a7adfb726c0cd4f1 700 Pfam PF17191 RecG wedge domain 9 162 6.7E-15 T 22-04-2016 IPR033454 RecG, wedge domain SRM_RS02250 f9d616086f524000a7adfb726c0cd4f1 700 Gene3D G3DSA:3.40.50.300 262 453 6.4E-58 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SRM_RS04605 0a3f906e8c57f1c9c4fa1ee1e4681b9d 217 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 153 167 1.0E-11 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 SRM_RS04605 0a3f906e8c57f1c9c4fa1ee1e4681b9d 217 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 167 183 1.0E-11 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 SRM_RS04605 0a3f906e8c57f1c9c4fa1ee1e4681b9d 217 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 183 195 1.0E-11 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 SRM_RS04605 0a3f906e8c57f1c9c4fa1ee1e4681b9d 217 Pfam PF00072 Response regulator receiver domain 4 116 3.6E-28 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SRM_RS04605 0a3f906e8c57f1c9c4fa1ee1e4681b9d 217 PANTHER PTHR26402 2 209 3.1E-54 T 22-04-2016 SRM_RS04605 0a3f906e8c57f1c9c4fa1ee1e4681b9d 217 SUPERFAMILY SSF46894 144 209 4.42E-19 T 22-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 SRM_RS04605 0a3f906e8c57f1c9c4fa1ee1e4681b9d 217 SUPERFAMILY SSF52172 3 133 1.17E-30 T 22-04-2016 IPR011006 CheY-like superfamily SRM_RS04605 0a3f906e8c57f1c9c4fa1ee1e4681b9d 217 Gene3D G3DSA:3.40.50.2300 3 119 8.2E-32 T 22-04-2016 SRM_RS04605 0a3f906e8c57f1c9c4fa1ee1e4681b9d 217 PANTHER PTHR26402:SF210 2 209 3.1E-54 T 22-04-2016 SRM_RS04605 0a3f906e8c57f1c9c4fa1ee1e4681b9d 217 Pfam PF00196 Bacterial regulatory proteins, luxR family 152 206 6.3E-16 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 SRM_RS04605 0a3f906e8c57f1c9c4fa1ee1e4681b9d 217 SMART SM00448 2 115 1.7E-24 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SRM_RS04605 0a3f906e8c57f1c9c4fa1ee1e4681b9d 217 Gene3D G3DSA:1.10.10.10 120 209 9.3E-24 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SRM_RS04605 0a3f906e8c57f1c9c4fa1ee1e4681b9d 217 SMART SM00421 150 207 1.3E-18 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 SRM_RS04605 0a3f906e8c57f1c9c4fa1ee1e4681b9d 217 ProSitePatterns PS00622 LuxR-type HTH domain signature. 167 194 - T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 SRM_RS02940 74c32780e1b4ef82e2cab53f630a7f1b 604 Pfam PF00009 Elongation factor Tu GTP binding domain 6 184 4.5E-55 T 22-04-2016 SRM_RS02940 74c32780e1b4ef82e2cab53f630a7f1b 604 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 8 179 8.5E-24 T 22-04-2016 IPR005225 Small GTP-binding protein domain GO:0005525 SRM_RS02940 74c32780e1b4ef82e2cab53f630a7f1b 604 SUPERFAMILY SSF54980 405 497 4.12E-23 T 22-04-2016 IPR009022 Elongation factor G, III-V domain SRM_RS02940 74c32780e1b4ef82e2cab53f630a7f1b 604 SMART SM00838 404 492 7.1E-4 T 22-04-2016 IPR000640 Translation elongation factor EFG, V domain SRM_RS02940 74c32780e1b4ef82e2cab53f630a7f1b 604 PANTHER PTHR23115:SF97 7 602 1.8E-269 T 22-04-2016 SRM_RS02940 74c32780e1b4ef82e2cab53f630a7f1b 604 Pfam PF00679 Elongation factor G C-terminus 405 491 4.9E-22 T 22-04-2016 IPR000640 Translation elongation factor EFG, V domain SRM_RS02940 74c32780e1b4ef82e2cab53f630a7f1b 604 Hamap MF_00071 Elongation factor 4 [lepA]. 1 604 280.213 T 22-04-2016 IPR006297 Elongation factor 4 GO:0005525 SRM_RS02940 74c32780e1b4ef82e2cab53f630a7f1b 604 Pfam PF03144 Elongation factor Tu domain 2 208 278 3.3E-12 T 22-04-2016 IPR004161 Translation elongation factor EFTu/EF1A, domain 2 GO:0005525 SRM_RS02940 74c32780e1b4ef82e2cab53f630a7f1b 604 Gene3D G3DSA:3.40.50.300 4 195 8.2E-60 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SRM_RS02940 74c32780e1b4ef82e2cab53f630a7f1b 604 TIGRFAM TIGR01393 lepA: elongation factor 4 6 602 1.1E-291 T 22-04-2016 IPR006297 Elongation factor 4 GO:0005525 SRM_RS02940 74c32780e1b4ef82e2cab53f630a7f1b 604 SUPERFAMILY SSF54980 295 373 5.4E-18 T 22-04-2016 IPR009022 Elongation factor G, III-V domain SRM_RS02940 74c32780e1b4ef82e2cab53f630a7f1b 604 Pfam PF06421 GTP-binding protein LepA C-terminus 494 599 1.3E-47 T 22-04-2016 IPR013842 GTP-binding protein LepA, C-terminal SRM_RS02940 74c32780e1b4ef82e2cab53f630a7f1b 604 Gene3D G3DSA:3.30.70.240 407 496 1.9E-20 T 22-04-2016 IPR000640 Translation elongation factor EFG, V domain SRM_RS02940 74c32780e1b4ef82e2cab53f630a7f1b 604 Gene3D G3DSA:3.30.70.870 294 371 1.0E-24 T 22-04-2016 SRM_RS02940 74c32780e1b4ef82e2cab53f630a7f1b 604 Gene3D G3DSA:2.40.30.10 196 293 1.4E-26 T 22-04-2016 SRM_RS02940 74c32780e1b4ef82e2cab53f630a7f1b 604 PANTHER PTHR23115 7 602 1.8E-269 T 22-04-2016 SRM_RS02940 74c32780e1b4ef82e2cab53f630a7f1b 604 Pfam PF14492 Elongation Factor G, domain II 295 368 2.5E-6 T 22-04-2016 IPR009022 Elongation factor G, III-V domain SRM_RS02940 74c32780e1b4ef82e2cab53f630a7f1b 604 SUPERFAMILY SSF52540 3 224 3.25E-57 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SRM_RS02940 74c32780e1b4ef82e2cab53f630a7f1b 604 PRINTS PR00315 GTP-binding elongation factor signature 9 22 1.5E-13 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 SRM_RS02940 74c32780e1b4ef82e2cab53f630a7f1b 604 PRINTS PR00315 GTP-binding elongation factor signature 93 104 1.5E-13 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 SRM_RS02940 74c32780e1b4ef82e2cab53f630a7f1b 604 PRINTS PR00315 GTP-binding elongation factor signature 77 87 1.5E-13 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 SRM_RS02940 74c32780e1b4ef82e2cab53f630a7f1b 604 PRINTS PR00315 GTP-binding elongation factor signature 129 138 1.5E-13 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 SRM_RS02940 74c32780e1b4ef82e2cab53f630a7f1b 604 PRINTS PR00315 GTP-binding elongation factor signature 52 60 1.5E-13 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 SRM_RS06510 e92adb322a343babd992bbfc113e608d 145 TIGRFAM TIGR01164 rplP_bact: ribosomal protein uL16 2 130 3.8E-47 T 22-04-2016 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 SRM_RS06510 e92adb322a343babd992bbfc113e608d 145 ProSitePatterns PS00701 Ribosomal protein L16 signature 2. 85 96 - T 22-04-2016 IPR020798 Ribosomal protein L16, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 SRM_RS06510 e92adb322a343babd992bbfc113e608d 145 Hamap MF_01342 50S ribosomal protein L16 [rplP]. 1 138 35.817 T 22-04-2016 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 SRM_RS06510 e92adb322a343babd992bbfc113e608d 145 ProSitePatterns PS00586 Ribosomal protein L16 signature 1. 62 73 - T 22-04-2016 IPR020798 Ribosomal protein L16, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 SRM_RS06510 e92adb322a343babd992bbfc113e608d 145 PRINTS PR00060 Ribosomal protein L16 signature 61 90 3.4E-32 T 22-04-2016 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 SRM_RS06510 e92adb322a343babd992bbfc113e608d 145 PRINTS PR00060 Ribosomal protein L16 signature 27 39 3.4E-32 T 22-04-2016 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 SRM_RS06510 e92adb322a343babd992bbfc113e608d 145 PRINTS PR00060 Ribosomal protein L16 signature 91 120 3.4E-32 T 22-04-2016 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 SRM_RS06510 e92adb322a343babd992bbfc113e608d 145 PRINTS PR00060 Ribosomal protein L16 signature 45 56 3.4E-32 T 22-04-2016 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 SRM_RS06510 e92adb322a343babd992bbfc113e608d 145 Gene3D G3DSA:3.90.1170.10 26 139 1.9E-50 T 22-04-2016 IPR016180 Ribosomal protein L10e/L16 GO:0003735|GO:0005840|GO:0006412 SRM_RS06510 e92adb322a343babd992bbfc113e608d 145 SUPERFAMILY SSF54686 1 139 2.49E-50 T 22-04-2016 IPR016180 Ribosomal protein L10e/L16 GO:0003735|GO:0005840|GO:0006412 SRM_RS06510 e92adb322a343babd992bbfc113e608d 145 PANTHER PTHR12220 1 138 1.2E-59 T 22-04-2016 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 SRM_RS06510 e92adb322a343babd992bbfc113e608d 145 Pfam PF00252 Ribosomal protein L16p/L10e 4 136 3.2E-47 T 22-04-2016 IPR016180 Ribosomal protein L10e/L16 GO:0003735|GO:0005840|GO:0006412 SRM_RS09155 5b7689e41b2f66ae2df765e498e288f1 633 Gene3D G3DSA:4.10.860.10 194 253 2.2E-13 T 22-04-2016 IPR001943 UVR domain GO:0005515 SRM_RS09155 5b7689e41b2f66ae2df765e498e288f1 633 TIGRFAM TIGR00194 uvrC: excinuclease ABC subunit C 12 603 4.3E-182 T 22-04-2016 IPR004791 UvrABC system, subunit C GO:0005737|GO:0006281|GO:0009380|GO:0009381 SRM_RS09155 5b7689e41b2f66ae2df765e498e288f1 633 Gene3D G3DSA:3.40.1440.10 22 100 4.1E-10 T 22-04-2016 IPR027299 GIY-YIG domain SRM_RS09155 5b7689e41b2f66ae2df765e498e288f1 633 Pfam PF14520 Helix-hairpin-helix domain 572 617 1.2E-9 T 22-04-2016 SRM_RS09155 5b7689e41b2f66ae2df765e498e288f1 633 SUPERFAMILY SSF46600 200 253 3.01E-11 T 22-04-2016 IPR001943 UVR domain GO:0005515 SRM_RS09155 5b7689e41b2f66ae2df765e498e288f1 633 SUPERFAMILY SSF47781 533 623 1.84E-19 T 22-04-2016 IPR010994 RuvA domain 2-like Reactome: REACT_216 SRM_RS09155 5b7689e41b2f66ae2df765e498e288f1 633 PANTHER PTHR30562 7 621 4.0E-228 T 22-04-2016 SRM_RS09155 5b7689e41b2f66ae2df765e498e288f1 633 Pfam PF01541 GIY-YIG catalytic domain 24 99 4.3E-8 T 22-04-2016 IPR000305 GIY-YIG nuclease superfamily SRM_RS09155 5b7689e41b2f66ae2df765e498e288f1 633 Pfam PF02151 UvrB/uvrC motif 215 248 4.5E-6 T 22-04-2016 IPR001943 UVR domain GO:0005515 SRM_RS09155 5b7689e41b2f66ae2df765e498e288f1 633 Gene3D G3DSA:1.10.150.20 570 621 4.9E-16 T 22-04-2016 SRM_RS09155 5b7689e41b2f66ae2df765e498e288f1 633 Pfam PF08459 UvrC Helix-hairpin-helix N-terminal 405 557 1.1E-49 T 22-04-2016 IPR001162 UvrC family homology region SRM_RS09155 5b7689e41b2f66ae2df765e498e288f1 633 Hamap MF_00203 UvrABC system protein C [uvrC]. 9 620 27.503 T 22-04-2016 IPR004791 UvrABC system, subunit C GO:0005737|GO:0006281|GO:0009380|GO:0009381 SRM_RS09155 5b7689e41b2f66ae2df765e498e288f1 633 PANTHER PTHR30562:SF1 7 621 4.0E-228 T 22-04-2016 SRM_RS09155 5b7689e41b2f66ae2df765e498e288f1 633 SUPERFAMILY SSF82771 23 106 2.09E-21 T 22-04-2016 IPR000305 GIY-YIG nuclease superfamily SRM_RS09155 5b7689e41b2f66ae2df765e498e288f1 633 SMART SM00465 22 104 2.6E-16 T 22-04-2016 IPR000305 GIY-YIG nuclease superfamily SRM_RS10140 60491da9ed5b8f792fc2979f2de88cec 1287 Pfam PF04560 RNA polymerase Rpb2, domain 7 1213 1286 5.0E-24 T 22-04-2016 IPR007641 RNA polymerase Rpb2, domain 7 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 SRM_RS10140 60491da9ed5b8f792fc2979f2de88cec 1287 Gene3D G3DSA:3.90.1100.10 638 691 4.3E-132 T 22-04-2016 SRM_RS10140 60491da9ed5b8f792fc2979f2de88cec 1287 Gene3D G3DSA:3.90.1100.10 28 163 4.3E-132 T 22-04-2016 SRM_RS10140 60491da9ed5b8f792fc2979f2de88cec 1287 Gene3D G3DSA:3.90.1100.10 424 570 4.3E-132 T 22-04-2016 SRM_RS10140 60491da9ed5b8f792fc2979f2de88cec 1287 Gene3D G3DSA:3.90.1110.10 325 423 3.3E-56 T 22-04-2016 IPR007642 RNA polymerase Rpb2, domain 2 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 SRM_RS10140 60491da9ed5b8f792fc2979f2de88cec 1287 Gene3D G3DSA:3.90.1110.10 165 240 3.3E-56 T 22-04-2016 IPR007642 RNA polymerase Rpb2, domain 2 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 SRM_RS10140 60491da9ed5b8f792fc2979f2de88cec 1287 Hamap MF_01321 DNA-directed RNA polymerase subunit beta [rpoB]. 22 1287 11.92 T 22-04-2016 IPR010243 DNA-directed RNA polymerase, beta subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 SRM_RS10140 60491da9ed5b8f792fc2979f2de88cec 1287 Gene3D G3DSA:2.40.50.150 809 920 1.3E-52 T 22-04-2016 IPR014724 RNA polymerase Rpb2, OB-fold GO:0003899 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 SRM_RS10140 60491da9ed5b8f792fc2979f2de88cec 1287 Gene3D G3DSA:2.40.50.150 1046 1060 1.3E-52 T 22-04-2016 IPR014724 RNA polymerase Rpb2, OB-fold GO:0003899 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 SRM_RS10140 60491da9ed5b8f792fc2979f2de88cec 1287 Gene3D G3DSA:2.40.270.10 1061 1189 4.6E-74 T 22-04-2016 IPR007120 DNA-directed RNA polymerase, subunit 2, domain 6 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 SRM_RS10140 60491da9ed5b8f792fc2979f2de88cec 1287 Gene3D G3DSA:2.40.270.10 775 802 4.6E-74 T 22-04-2016 IPR007120 DNA-directed RNA polymerase, subunit 2, domain 6 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 SRM_RS10140 60491da9ed5b8f792fc2979f2de88cec 1287 Gene3D G3DSA:2.30.150.10 571 635 4.1E-26 T 22-04-2016 IPR019462 DNA-directed RNA polymerase, beta subunit, external 1 domain GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 SRM_RS10140 60491da9ed5b8f792fc2979f2de88cec 1287 ProSitePatterns PS01166 RNA polymerases beta chain signature. 1064 1076 - T 22-04-2016 IPR007121 RNA polymerase, beta subunit, conserved site GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 SRM_RS10140 60491da9ed5b8f792fc2979f2de88cec 1287 Pfam PF10385 RNA polymerase beta subunit external 1 domain 570 635 1.0E-25 T 22-04-2016 IPR019462 DNA-directed RNA polymerase, beta subunit, external 1 domain GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 SRM_RS10140 60491da9ed5b8f792fc2979f2de88cec 1287 TIGRFAM TIGR02013 rpoB: DNA-directed RNA polymerase, beta subunit 21 1285 0.0 T 22-04-2016 IPR010243 DNA-directed RNA polymerase, beta subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 SRM_RS10140 60491da9ed5b8f792fc2979f2de88cec 1287 Pfam PF04563 RNA polymerase beta subunit 38 478 3.3E-28 T 22-04-2016 IPR007644 RNA polymerase, beta subunit, protrusion GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 SRM_RS10140 60491da9ed5b8f792fc2979f2de88cec 1287 PANTHER PTHR20856:SF20 319 913 0.0 T 22-04-2016 SRM_RS10140 60491da9ed5b8f792fc2979f2de88cec 1287 PANTHER PTHR20856:SF20 20 239 0.0 T 22-04-2016 SRM_RS10140 60491da9ed5b8f792fc2979f2de88cec 1287 PANTHER PTHR20856:SF20 1037 1286 0.0 T 22-04-2016 SRM_RS10140 60491da9ed5b8f792fc2979f2de88cec 1287 PANTHER PTHR20856 319 913 0.0 T 22-04-2016 IPR015712 DNA-directed RNA polymerase, subunit 2 GO:0003899|GO:0006351|GO:0032549 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 SRM_RS10140 60491da9ed5b8f792fc2979f2de88cec 1287 PANTHER PTHR20856 20 239 0.0 T 22-04-2016 IPR015712 DNA-directed RNA polymerase, subunit 2 GO:0003899|GO:0006351|GO:0032549 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 SRM_RS10140 60491da9ed5b8f792fc2979f2de88cec 1287 PANTHER PTHR20856 1037 1286 0.0 T 22-04-2016 IPR015712 DNA-directed RNA polymerase, subunit 2 GO:0003899|GO:0006351|GO:0032549 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 SRM_RS10140 60491da9ed5b8f792fc2979f2de88cec 1287 Gene3D G3DSA:2.40.50.100 694 774 7.3E-30 T 22-04-2016 SRM_RS10140 60491da9ed5b8f792fc2979f2de88cec 1287 Pfam PF04561 RNA polymerase Rpb2, domain 2 311 433 6.9E-22 T 22-04-2016 IPR007642 RNA polymerase Rpb2, domain 2 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 SRM_RS10140 60491da9ed5b8f792fc2979f2de88cec 1287 Pfam PF04561 RNA polymerase Rpb2, domain 2 163 232 8.7E-10 T 22-04-2016 IPR007642 RNA polymerase Rpb2, domain 2 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 SRM_RS10140 60491da9ed5b8f792fc2979f2de88cec 1287 Pfam PF00562 RNA polymerase Rpb2, domain 6 696 1211 5.3E-161 T 22-04-2016 IPR007120 DNA-directed RNA polymerase, subunit 2, domain 6 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 SRM_RS10140 60491da9ed5b8f792fc2979f2de88cec 1287 Pfam PF04565 RNA polymerase Rpb2, domain 3 492 560 1.5E-27 T 22-04-2016 IPR007645 RNA polymerase Rpb2, domain 3 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 SRM_RS10140 60491da9ed5b8f792fc2979f2de88cec 1287 SUPERFAMILY SSF64484 22 236 0.0 T 22-04-2016 SRM_RS10140 60491da9ed5b8f792fc2979f2de88cec 1287 SUPERFAMILY SSF64484 1040 1286 0.0 T 22-04-2016 SRM_RS10140 60491da9ed5b8f792fc2979f2de88cec 1287 SUPERFAMILY SSF64484 322 922 0.0 T 22-04-2016 SRM_RS08730 b50c8eba0575466b50acd25bcffe74f3 356 SUPERFAMILY SSF55920 131 355 2.09E-76 T 22-04-2016 IPR000994 Peptidase M24, structural domain SRM_RS08730 b50c8eba0575466b50acd25bcffe74f3 356 Pfam PF00557 Metallopeptidase family M24 137 340 1.2E-65 T 22-04-2016 IPR000994 Peptidase M24, structural domain SRM_RS08730 b50c8eba0575466b50acd25bcffe74f3 356 Gene3D G3DSA:3.40.350.10 1 126 1.4E-20 T 22-04-2016 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal SRM_RS08730 b50c8eba0575466b50acd25bcffe74f3 356 PANTHER PTHR10804 59 356 1.6E-86 T 22-04-2016 SRM_RS08730 b50c8eba0575466b50acd25bcffe74f3 356 ProSitePatterns PS00491 Aminopeptidase P and proline dipeptidase signature. 285 297 - T 22-04-2016 IPR001131 Peptidase M24B, X-Pro dipeptidase/aminopeptidase P, conserved site SRM_RS08730 b50c8eba0575466b50acd25bcffe74f3 356 SUPERFAMILY SSF53092 2 125 7.32E-21 T 22-04-2016 IPR028980 Creatinase/Aminopeptidase P, N-terminal SRM_RS08730 b50c8eba0575466b50acd25bcffe74f3 356 Pfam PF01321 Creatinase/Prolidase N-terminal domain 4 125 2.6E-17 T 22-04-2016 IPR000587 Creatinase, N-terminal GO:0016787 SRM_RS08730 b50c8eba0575466b50acd25bcffe74f3 356 PANTHER PTHR10804:SF110 59 356 1.6E-86 T 22-04-2016 SRM_RS08730 b50c8eba0575466b50acd25bcffe74f3 356 Gene3D G3DSA:3.90.230.10 130 354 1.6E-79 T 22-04-2016 IPR000994 Peptidase M24, structural domain SRM_RS03245 d00051039a3917d1ae5e333483966f17 323 Gene3D G3DSA:1.10.287.110 3 72 4.6E-33 T 22-04-2016 IPR001623 DnaJ domain SRM_RS03245 d00051039a3917d1ae5e333483966f17 323 Gene3D G3DSA:1.10.287.110 110 128 4.6E-33 T 22-04-2016 IPR001623 DnaJ domain SRM_RS03245 d00051039a3917d1ae5e333483966f17 323 SUPERFAMILY SSF49493 152 232 2.88E-20 T 22-04-2016 IPR008971 HSP40/DnaJ peptide-binding GO:0006457|GO:0051082 SRM_RS03245 d00051039a3917d1ae5e333483966f17 323 PRINTS PR00625 DnaJ domain signature 43 63 2.7E-26 T 22-04-2016 IPR001623 DnaJ domain SRM_RS03245 d00051039a3917d1ae5e333483966f17 323 PRINTS PR00625 DnaJ domain signature 63 82 2.7E-26 T 22-04-2016 IPR001623 DnaJ domain SRM_RS03245 d00051039a3917d1ae5e333483966f17 323 PRINTS PR00625 DnaJ domain signature 8 26 2.7E-26 T 22-04-2016 IPR001623 DnaJ domain SRM_RS03245 d00051039a3917d1ae5e333483966f17 323 PRINTS PR00625 DnaJ domain signature 26 41 2.7E-26 T 22-04-2016 IPR001623 DnaJ domain SRM_RS03245 d00051039a3917d1ae5e333483966f17 323 PANTHER PTHR24078 111 318 8.9E-83 T 22-04-2016 SRM_RS03245 d00051039a3917d1ae5e333483966f17 323 PANTHER PTHR24078 1 85 8.9E-83 T 22-04-2016 SRM_RS03245 d00051039a3917d1ae5e333483966f17 323 SUPERFAMILY SSF46565 4 94 1.26E-30 T 22-04-2016 IPR001623 DnaJ domain SRM_RS03245 d00051039a3917d1ae5e333483966f17 323 PANTHER PTHR24078:SF190 111 318 8.9E-83 T 22-04-2016 SRM_RS03245 d00051039a3917d1ae5e333483966f17 323 PANTHER PTHR24078:SF190 1 85 8.9E-83 T 22-04-2016 SRM_RS03245 d00051039a3917d1ae5e333483966f17 323 Gene3D G3DSA:2.60.260.20 226 303 3.5E-20 T 22-04-2016 SRM_RS03245 d00051039a3917d1ae5e333483966f17 323 Gene3D G3DSA:2.60.260.20 153 223 1.3E-19 T 22-04-2016 SRM_RS03245 d00051039a3917d1ae5e333483966f17 323 Pfam PF00226 DnaJ domain 6 68 2.3E-29 T 22-04-2016 IPR001623 DnaJ domain SRM_RS03245 d00051039a3917d1ae5e333483966f17 323 SMART SM00271 5 63 2.4E-31 T 22-04-2016 IPR001623 DnaJ domain SRM_RS03245 d00051039a3917d1ae5e333483966f17 323 SUPERFAMILY SSF49493 229 313 9.03E-22 T 22-04-2016 IPR008971 HSP40/DnaJ peptide-binding GO:0006457|GO:0051082 SRM_RS03245 d00051039a3917d1ae5e333483966f17 323 ProSitePatterns PS00636 Nt-dnaJ domain signature. 48 67 - T 22-04-2016 IPR018253 DnaJ domain, conserved site SRM_RS03245 d00051039a3917d1ae5e333483966f17 323 Pfam PF01556 DnaJ C terminal domain 159 302 4.7E-34 T 22-04-2016 IPR002939 Chaperone DnaJ, C-terminal SRM_RS01935 b35a1e92cbb6b7fb9e7dc0b21a6ee8ad 367 PANTHER PTHR12526 63 363 2.0E-53 T 22-04-2016 SRM_RS01935 b35a1e92cbb6b7fb9e7dc0b21a6ee8ad 367 Gene3D G3DSA:3.40.50.2000 177 332 7.5E-21 T 22-04-2016 SRM_RS01935 b35a1e92cbb6b7fb9e7dc0b21a6ee8ad 367 Pfam PF00534 Glycosyl transferases group 1 177 333 1.2E-27 T 22-04-2016 IPR001296 Glycosyl transferase, family 1 SRM_RS01935 b35a1e92cbb6b7fb9e7dc0b21a6ee8ad 367 PANTHER PTHR12526:SF1 63 363 2.0E-53 T 22-04-2016 SRM_RS01935 b35a1e92cbb6b7fb9e7dc0b21a6ee8ad 367 SUPERFAMILY SSF53756 1 358 8.07E-62 T 22-04-2016 SRM_RS01935 b35a1e92cbb6b7fb9e7dc0b21a6ee8ad 367 Pfam PF13439 Glycosyltransferase Family 4 1 161 1.7E-18 T 22-04-2016 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain SRM_RS10885 3d94e5d0e6573663a1138b88202745a4 508 PANTHER PTHR11659:SF0 4 502 3.8E-230 T 22-04-2016 SRM_RS10885 3d94e5d0e6573663a1138b88202745a4 508 SUPERFAMILY SSF55931 7 307 2.29E-114 T 22-04-2016 SRM_RS10885 3d94e5d0e6573663a1138b88202745a4 508 ProSitePatterns PS01234 Glutamyl-tRNA(Gln) amidotransferase subunit B signature. 155 169 - T 22-04-2016 IPR017958 Glutamyl-tRNA(Gln) amidotransferase, subunit B, conserved site GO:0016884 SRM_RS10885 3d94e5d0e6573663a1138b88202745a4 508 SMART SM00845 339 497 1.0E-54 T 22-04-2016 IPR018027 Asn/Gln amidotransferase GO:0016884 SRM_RS10885 3d94e5d0e6573663a1138b88202745a4 508 TIGRFAM TIGR00133 gatB: aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, B subunit 5 497 4.4E-162 T 22-04-2016 IPR004413 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, B subunit GO:0016884 SRM_RS10885 3d94e5d0e6573663a1138b88202745a4 508 Pfam PF02934 GatB/GatE catalytic domain 9 299 1.7E-109 T 22-04-2016 IPR006075 Aspartyl/Glutamyl-tRNA(Gln) amidotransferase, subunit B/E, catalytic GO:0016874 SRM_RS10885 3d94e5d0e6573663a1138b88202745a4 508 Hamap MF_00121 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B [gatB]. 5 498 36.383 T 22-04-2016 IPR004413 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, B subunit GO:0016884 SRM_RS10885 3d94e5d0e6573663a1138b88202745a4 508 SUPERFAMILY SSF89095 308 422 1.01E-26 T 22-04-2016 IPR003789 Aspartyl/glutamyl-tRNA amidotransferase subunit B-related GO:0016884 SRM_RS10885 3d94e5d0e6573663a1138b88202745a4 508 Pfam PF02637 GatB domain 358 497 6.7E-36 T 22-04-2016 IPR018027 Asn/Gln amidotransferase GO:0016884 SRM_RS10885 3d94e5d0e6573663a1138b88202745a4 508 PANTHER PTHR11659 4 502 3.8E-230 T 22-04-2016 IPR017959 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, subunit B /E GO:0016884 SRM_RS05670 7d0611b3ad9d3af2cf29345aede2fbd4 448 PANTHER PTHR22807 30 445 2.5E-120 T 22-04-2016 SRM_RS05670 7d0611b3ad9d3af2cf29345aede2fbd4 448 TIGRFAM TIGR00563 rsmB: 16S rRNA (cytosine(967)-C(5))-methyltransferase 35 445 2.1E-94 T 22-04-2016 IPR004573 rRNA small subunit methyltransferase B GO:0006364|GO:0008649 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 SRM_RS05670 7d0611b3ad9d3af2cf29345aede2fbd4 448 Gene3D G3DSA:1.10.940.10 9 156 1.5E-36 T 22-04-2016 IPR006027 NusB/RsmB/TIM44 GO:0003723|GO:0006355 SRM_RS05670 7d0611b3ad9d3af2cf29345aede2fbd4 448 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 229 243 5.46E-25 T 22-04-2016 IPR023267 RNA (C5-cytosine) methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 SRM_RS05670 7d0611b3ad9d3af2cf29345aede2fbd4 448 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 327 339 5.46E-25 T 22-04-2016 IPR023267 RNA (C5-cytosine) methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 SRM_RS05670 7d0611b3ad9d3af2cf29345aede2fbd4 448 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 428 445 5.46E-25 T 22-04-2016 IPR023267 RNA (C5-cytosine) methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 SRM_RS05670 7d0611b3ad9d3af2cf29345aede2fbd4 448 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 377 393 5.46E-25 T 22-04-2016 IPR023267 RNA (C5-cytosine) methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 SRM_RS05670 7d0611b3ad9d3af2cf29345aede2fbd4 448 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 258 268 5.46E-25 T 22-04-2016 IPR023267 RNA (C5-cytosine) methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 SRM_RS05670 7d0611b3ad9d3af2cf29345aede2fbd4 448 SUPERFAMILY SSF53335 140 445 8.77E-67 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SRM_RS05670 7d0611b3ad9d3af2cf29345aede2fbd4 448 SUPERFAMILY SSF48013 10 155 1.96E-29 T 22-04-2016 IPR006027 NusB/RsmB/TIM44 GO:0003723|GO:0006355 SRM_RS05670 7d0611b3ad9d3af2cf29345aede2fbd4 448 Pfam PF01029 NusB family 10 127 3.3E-23 T 22-04-2016 IPR006027 NusB/RsmB/TIM44 GO:0003723|GO:0006355 SRM_RS05670 7d0611b3ad9d3af2cf29345aede2fbd4 448 PANTHER PTHR22807:SF30 30 445 2.5E-120 T 22-04-2016 SRM_RS05670 7d0611b3ad9d3af2cf29345aede2fbd4 448 Gene3D G3DSA:3.40.50.150 239 445 1.3E-52 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SRM_RS05670 7d0611b3ad9d3af2cf29345aede2fbd4 448 Pfam PF01189 16S rRNA methyltransferase RsmB/F 247 444 4.7E-52 T 22-04-2016 IPR001678 SAM-dependent methyltransferase RsmB/NOP2-type GO:0008168 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 SRM_RS12895 cb0471b00eade5a5cd97f4e4be2505ed 321 TIGRFAM TIGR02138 phosphate_pstC: phosphate ABC transporter, permease protein PstC 36 315 3.0E-83 T 22-04-2016 IPR011864 Phosphate ABC transporter, permease protein PstC GO:0005315|GO:0006817|GO:0016021 SRM_RS12895 cb0471b00eade5a5cd97f4e4be2505ed 321 SUPERFAMILY SSF161098 51 313 2.29E-38 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 SRM_RS12895 cb0471b00eade5a5cd97f4e4be2505ed 321 PANTHER PTHR30425 19 321 1.5E-122 T 22-04-2016 SRM_RS12895 cb0471b00eade5a5cd97f4e4be2505ed 321 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 113 313 9.7E-20 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 SRM_RS12895 cb0471b00eade5a5cd97f4e4be2505ed 321 PANTHER PTHR30425:SF3 19 321 1.5E-122 T 22-04-2016 SRM_RS12895 cb0471b00eade5a5cd97f4e4be2505ed 321 Gene3D G3DSA:1.10.3720.10 51 317 1.6E-41 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 SRM_RS04895 7ee370ed73d58b91caf44640e2fd4765 257 PANTHER PTHR24319 1 252 7.6E-53 T 22-04-2016 SRM_RS04895 7ee370ed73d58b91caf44640e2fd4765 257 SUPERFAMILY SSF51735 6 253 4.03E-77 T 22-04-2016 IPR016040 NAD(P)-binding domain SRM_RS04895 7ee370ed73d58b91caf44640e2fd4765 257 Gene3D G3DSA:3.40.50.720 1 253 6.9E-81 T 22-04-2016 IPR016040 NAD(P)-binding domain SRM_RS04895 7ee370ed73d58b91caf44640e2fd4765 257 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 157 176 1.1E-28 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SRM_RS04895 7ee370ed73d58b91caf44640e2fd4765 257 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 83 94 1.1E-28 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SRM_RS04895 7ee370ed73d58b91caf44640e2fd4765 257 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 177 194 1.1E-28 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SRM_RS04895 7ee370ed73d58b91caf44640e2fd4765 257 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 216 236 1.1E-28 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SRM_RS04895 7ee370ed73d58b91caf44640e2fd4765 257 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 130 146 1.1E-28 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SRM_RS04895 7ee370ed73d58b91caf44640e2fd4765 257 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 9 26 1.1E-28 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SRM_RS04895 7ee370ed73d58b91caf44640e2fd4765 257 PANTHER PTHR24319:SF23 1 252 7.6E-53 T 22-04-2016 SRM_RS04895 7ee370ed73d58b91caf44640e2fd4765 257 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 14 252 9.7E-57 T 22-04-2016 SRM_RS04895 7ee370ed73d58b91caf44640e2fd4765 257 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 144 172 - T 22-04-2016 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 SRM_RS12430 32057bfc8f86fb1fb19bf14eab477c42 931 TIGRFAM TIGR04183 Por_Secre_tail: Por secretion system C-terminal sorting domain 853 929 2.1E-13 T 22-04-2016 IPR026444 Secretion system C-terminal sorting domain SRM_RS12430 32057bfc8f86fb1fb19bf14eab477c42 931 Pfam PF00082 Subtilase family 293 631 5.7E-10 T 22-04-2016 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 SRM_RS12430 32057bfc8f86fb1fb19bf14eab477c42 931 SUPERFAMILY SSF52743 494 683 5.76E-30 T 22-04-2016 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 SRM_RS12430 32057bfc8f86fb1fb19bf14eab477c42 931 SUPERFAMILY SSF52743 207 350 5.76E-30 T 22-04-2016 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 SRM_RS12430 32057bfc8f86fb1fb19bf14eab477c42 931 Gene3D G3DSA:3.40.50.200 204 350 1.9E-22 T 22-04-2016 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 SRM_RS12430 32057bfc8f86fb1fb19bf14eab477c42 931 Gene3D G3DSA:3.40.50.200 493 660 1.9E-22 T 22-04-2016 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 SRM_RS12430 32057bfc8f86fb1fb19bf14eab477c42 931 SUPERFAMILY SSF49265 661 836 5.98E-7 T 22-04-2016 IPR003961 Fibronectin type III GO:0005515 SRM_RS12430 32057bfc8f86fb1fb19bf14eab477c42 931 Gene3D G3DSA:2.60.40.10 764 838 4.5E-7 T 22-04-2016 IPR013783 Immunoglobulin-like fold SRM_RS12430 32057bfc8f86fb1fb19bf14eab477c42 931 ProSitePatterns PS00138 Serine proteases, subtilase family, serine active site. 590 600 - T 22-04-2016 IPR023828 Peptidase S8, subtilisin, Ser-active site SRM_RS12430 32057bfc8f86fb1fb19bf14eab477c42 931 SMART SM00060 755 831 27.0 T 22-04-2016 IPR003961 Fibronectin type III GO:0005515 SRM_RS12430 32057bfc8f86fb1fb19bf14eab477c42 931 SMART SM00060 661 741 0.15 T 22-04-2016 IPR003961 Fibronectin type III GO:0005515 SRM_RS03895 f20d3c42b6c53a0c5a48775239e96f43 111 SUPERFAMILY SSF81301 5 104 1.14E-18 T 22-04-2016 SRM_RS03895 f20d3c42b6c53a0c5a48775239e96f43 111 Gene3D G3DSA:3.30.460.10 6 102 1.0E-16 T 22-04-2016 SRM_RS03895 f20d3c42b6c53a0c5a48775239e96f43 111 Pfam PF01909 Nucleotidyltransferase domain 9 80 1.6E-9 T 22-04-2016 IPR002934 Polymerase, nucleotidyl transferase domain GO:0016779 SRM_RS01615 ca663f0c338ca37fe0562746ba35029e 532 PANTHER PTHR32089 177 503 6.9E-102 T 22-04-2016 SRM_RS01615 ca663f0c338ca37fe0562746ba35029e 532 SMART SM00304 168 220 3.5E-6 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 SRM_RS01615 ca663f0c338ca37fe0562746ba35029e 532 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 298 499 6.2E-49 T 22-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 SRM_RS01615 ca663f0c338ca37fe0562746ba35029e 532 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 256 285 9.9E-11 T 22-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 SRM_RS01615 ca663f0c338ca37fe0562746ba35029e 532 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 333 360 9.9E-11 T 22-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 SRM_RS01615 ca663f0c338ca37fe0562746ba35029e 532 SUPERFAMILY SSF58104 188 501 1.31E-70 T 22-04-2016 SRM_RS01615 ca663f0c338ca37fe0562746ba35029e 532 Gene3D G3DSA:1.10.287.950 249 470 3.4E-56 T 22-04-2016 SRM_RS01615 ca663f0c338ca37fe0562746ba35029e 532 SMART SM00283 235 500 1.2E-73 T 22-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 SRM_RS03030 2e5114363d5fab8b84140ff469166fa4 632 PANTHER PTHR32154 9 233 1.5E-196 T 22-04-2016 SRM_RS03030 2e5114363d5fab8b84140ff469166fa4 632 PANTHER PTHR32154 257 423 1.5E-196 T 22-04-2016 SRM_RS03030 2e5114363d5fab8b84140ff469166fa4 632 PANTHER PTHR32154 463 631 1.5E-196 T 22-04-2016 SRM_RS03030 2e5114363d5fab8b84140ff469166fa4 632 SUPERFAMILY SSF52922 517 629 4.55E-18 T 22-04-2016 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 SRM_RS03030 2e5114363d5fab8b84140ff469166fa4 632 Gene3D G3DSA:3.40.50.920 518 629 1.6E-13 T 22-04-2016 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 SRM_RS03030 2e5114363d5fab8b84140ff469166fa4 632 Pfam PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg 263 489 8.6E-50 T 22-04-2016 IPR002880 Pyruvate flavodoxin/ferredoxin oxidoreductase, N-terminal GO:0016491|GO:0055114 SRM_RS03030 2e5114363d5fab8b84140ff469166fa4 632 SUPERFAMILY SSF53323 18 227 8.24E-18 T 22-04-2016 IPR002869 Pyruvate-flavodoxin oxidoreductase, central domain GO:0016491|GO:0055114 SRM_RS03030 2e5114363d5fab8b84140ff469166fa4 632 Gene3D G3DSA:3.40.50.970 228 429 6.9E-73 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold SRM_RS03030 2e5114363d5fab8b84140ff469166fa4 632 Pfam PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase 24 213 6.0E-32 T 22-04-2016 IPR019752 Pyruvate/ketoisovalerate oxidoreductase, catalytic domain GO:0016903|GO:0055114 SRM_RS03030 2e5114363d5fab8b84140ff469166fa4 632 Gene3D G3DSA:3.40.920.10 17 217 1.3E-26 T 22-04-2016 IPR019752 Pyruvate/ketoisovalerate oxidoreductase, catalytic domain GO:0016903|GO:0055114 SRM_RS03030 2e5114363d5fab8b84140ff469166fa4 632 Pfam PF17147 Pyruvate:ferredoxin oxidoreductase core domain II 527 618 4.4E-7 T 22-04-2016 IPR033412 Pyruvate:ferredoxin oxidoreductase, core domain II SRM_RS03030 2e5114363d5fab8b84140ff469166fa4 632 TIGRFAM TIGR03710 OAFO_sf: 2-oxoacid:acceptor oxidoreductase, alpha subunit 16 622 1.7E-201 T 22-04-2016 IPR022367 2-oxoacid:acceptor oxidoreductase, alpha subunit KEGG: 00020+1.2.7.3|KEGG: 00720+1.2.7.3|MetaCyc: PWY-5392|MetaCyc: PWY-6969|UniPathway: UPA00223 SRM_RS03030 2e5114363d5fab8b84140ff469166fa4 632 PANTHER PTHR32154:SF14 9 233 1.5E-196 T 22-04-2016 SRM_RS03030 2e5114363d5fab8b84140ff469166fa4 632 PANTHER PTHR32154:SF14 257 423 1.5E-196 T 22-04-2016 SRM_RS03030 2e5114363d5fab8b84140ff469166fa4 632 PANTHER PTHR32154:SF14 463 631 1.5E-196 T 22-04-2016 SRM_RS03030 2e5114363d5fab8b84140ff469166fa4 632 SUPERFAMILY SSF52518 236 508 1.82E-59 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold SRM_RS16050 eeab8e8cdb2c6f0f4e6b1b336ee9eb81 439 PANTHER PTHR10992 129 420 3.2E-31 T 22-04-2016 SRM_RS16050 eeab8e8cdb2c6f0f4e6b1b336ee9eb81 439 TIGRFAM TIGR03081 metmalonyl_epim: methylmalonyl-CoA epimerase 55 182 3.4E-41 T 22-04-2016 IPR017515 Methylmalonyl-CoA epimerase KEGG: 00280+5.1.99.1|KEGG: 00630+5.1.99.1|KEGG: 00640+5.1.99.1|KEGG: 00720+5.1.99.1|MetaCyc: PWY-5741|MetaCyc: PWY-5743|MetaCyc: PWY-5789|MetaCyc: PWY-6728|MetaCyc: PWY-7384 SRM_RS16050 eeab8e8cdb2c6f0f4e6b1b336ee9eb81 439 SUPERFAMILY SSF53474 184 420 5.72E-41 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold SRM_RS16050 eeab8e8cdb2c6f0f4e6b1b336ee9eb81 439 Pfam PF13669 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 57 167 1.3E-25 T 22-04-2016 SRM_RS16050 eeab8e8cdb2c6f0f4e6b1b336ee9eb81 439 SUPERFAMILY SSF54593 44 185 4.93E-34 T 22-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase SRM_RS16050 eeab8e8cdb2c6f0f4e6b1b336ee9eb81 439 Gene3D G3DSA:3.40.50.1820 191 423 1.0E-39 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold SRM_RS16050 eeab8e8cdb2c6f0f4e6b1b336ee9eb81 439 Pfam PF00561 alpha/beta hydrolase fold 211 318 5.0E-16 T 22-04-2016 IPR000073 Alpha/beta hydrolase fold-1 SRM_RS16050 eeab8e8cdb2c6f0f4e6b1b336ee9eb81 439 PRINTS PR00111 Alpha/beta hydrolase fold signature 296 309 1.3E-6 T 22-04-2016 IPR000073 Alpha/beta hydrolase fold-1 SRM_RS16050 eeab8e8cdb2c6f0f4e6b1b336ee9eb81 439 PRINTS PR00111 Alpha/beta hydrolase fold signature 282 295 1.3E-6 T 22-04-2016 IPR000073 Alpha/beta hydrolase fold-1 SRM_RS16050 eeab8e8cdb2c6f0f4e6b1b336ee9eb81 439 PRINTS PR00111 Alpha/beta hydrolase fold signature 237 252 1.3E-6 T 22-04-2016 IPR000073 Alpha/beta hydrolase fold-1 SRM_RS16050 eeab8e8cdb2c6f0f4e6b1b336ee9eb81 439 Pfam PF08386 TAP-like protein 371 437 4.5E-5 T 22-04-2016 IPR013595 Peptidase S33 tripeptidyl aminopeptidase-like, C-terminal SRM_RS16050 eeab8e8cdb2c6f0f4e6b1b336ee9eb81 439 Gene3D G3DSA:3.10.180.10 54 182 7.8E-39 T 22-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase SRM_RS06330 1b1e6c9afa72eaf86c0f2afa859e2568 227 Pfam PF00005 ABC transporter 22 169 4.0E-33 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 SRM_RS06330 1b1e6c9afa72eaf86c0f2afa859e2568 227 ProSitePatterns PS00211 ABC transporters family signature. 142 156 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 SRM_RS06330 1b1e6c9afa72eaf86c0f2afa859e2568 227 PANTHER PTHR24220:SF470 3 227 7.5E-87 T 22-04-2016 SRM_RS06330 1b1e6c9afa72eaf86c0f2afa859e2568 227 PANTHER PTHR24220 3 227 7.5E-87 T 22-04-2016 SRM_RS06330 1b1e6c9afa72eaf86c0f2afa859e2568 227 SMART SM00382 31 219 3.6E-8 T 22-04-2016 IPR003593 AAA+ ATPase domain SRM_RS06330 1b1e6c9afa72eaf86c0f2afa859e2568 227 Gene3D G3DSA:3.40.50.300 2 223 2.4E-65 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SRM_RS06330 1b1e6c9afa72eaf86c0f2afa859e2568 227 SUPERFAMILY SSF52540 1 224 2.13E-64 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SRM_RS03480 f75eb2e69dc22c90a42c564cf7425249 306 PANTHER PTHR13696 1 261 6.2E-90 T 22-04-2016 SRM_RS03480 f75eb2e69dc22c90a42c564cf7425249 306 SUPERFAMILY SSF52540 1 256 4.61E-65 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SRM_RS03480 f75eb2e69dc22c90a42c564cf7425249 306 Pfam PF13614 AAA domain 2 178 4.5E-65 T 22-04-2016 IPR025669 AAA domain SRM_RS03480 f75eb2e69dc22c90a42c564cf7425249 306 PANTHER PTHR13696:SF52 1 261 6.2E-90 T 22-04-2016 SRM_RS03480 f75eb2e69dc22c90a42c564cf7425249 306 Gene3D G3DSA:3.40.50.300 3 259 7.3E-69 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SRM_RS10050 1c93cae19b62a16e975455854a24763d 190 Gene3D G3DSA:3.40.50.150 10 131 3.0E-18 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SRM_RS10050 1c93cae19b62a16e975455854a24763d 190 Pfam PF13649 Methyltransferase domain 22 121 3.4E-11 T 22-04-2016 SRM_RS10050 1c93cae19b62a16e975455854a24763d 190 SUPERFAMILY SSF53335 8 136 3.77E-19 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SRM_RS10545 6b3052f7e435a18fd332e2ea0a191cd4 363 PANTHER PTHR10174:SF141 221 355 5.4E-78 T 22-04-2016 SRM_RS10545 6b3052f7e435a18fd332e2ea0a191cd4 363 PANTHER PTHR10174:SF141 79 202 5.4E-78 T 22-04-2016 SRM_RS10545 6b3052f7e435a18fd332e2ea0a191cd4 363 SMART SM00859 7 132 1.3E-37 T 22-04-2016 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 SRM_RS10545 6b3052f7e435a18fd332e2ea0a191cd4 363 Gene3D G3DSA:3.30.360.10 192 318 1.3E-18 T 22-04-2016 SRM_RS10545 6b3052f7e435a18fd332e2ea0a191cd4 363 Pfam PF01118 Semialdehyde dehydrogenase, NAD binding domain 7 130 7.1E-33 T 22-04-2016 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 SRM_RS10545 6b3052f7e435a18fd332e2ea0a191cd4 363 TIGRFAM TIGR00978 asd_EA: aspartate-semialdehyde dehydrogenase 7 343 2.4E-125 T 22-04-2016 IPR005676 Aspartate-semialdehyde dehydrogenase, peptidoglycan lacking GO:0004073|GO:0006531|GO:0009086|GO:0009088|GO:0009089|GO:0009097|GO:0050661|GO:0055114 SRM_RS10545 6b3052f7e435a18fd332e2ea0a191cd4 363 Pfam PF02774 Semialdehyde dehydrogenase, dimerisation domain 158 329 4.2E-32 T 22-04-2016 IPR012280 Semialdehyde dehydrogenase, dimerisation domain GO:0003942|GO:0005737|GO:0008652|GO:0016620|GO:0046983|GO:0055114 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 SRM_RS10545 6b3052f7e435a18fd332e2ea0a191cd4 363 Gene3D G3DSA:3.40.50.720 5 172 1.0E-47 T 22-04-2016 IPR016040 NAD(P)-binding domain SRM_RS10545 6b3052f7e435a18fd332e2ea0a191cd4 363 SUPERFAMILY SSF55347 147 331 2.4E-37 T 22-04-2016 SRM_RS10545 6b3052f7e435a18fd332e2ea0a191cd4 363 PIRSF PIRSF000148 5 349 1.3E-108 T 22-04-2016 IPR012080 Aspartate-semialdehyde dehydrogenase GO:0004073|GO:0009086|GO:0009088|GO:0009089|GO:0009097|GO:0050661|GO:0055114 KEGG: 00260+1.2.1.11|KEGG: 00261+1.2.1.11|KEGG: 00270+1.2.1.11|KEGG: 00300+1.2.1.11|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|UniPathway: UPA00034|UniPathway: UPA00050|UniPathway: UPA00051 SRM_RS10545 6b3052f7e435a18fd332e2ea0a191cd4 363 SUPERFAMILY SSF51735 6 176 7.81E-45 T 22-04-2016 IPR016040 NAD(P)-binding domain SRM_RS10545 6b3052f7e435a18fd332e2ea0a191cd4 363 PANTHER PTHR10174 221 355 5.4E-78 T 22-04-2016 SRM_RS10545 6b3052f7e435a18fd332e2ea0a191cd4 363 PANTHER PTHR10174 79 202 5.4E-78 T 22-04-2016 SRM_RS08560 57f2c2d984913cdc6cf97ed9822c6ce1 524 ProSitePatterns PS00978 FAD-dependent glycerol-3-phosphate dehydrogenase signature 2. 368 378 - T 22-04-2016 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952 SRM_RS08560 57f2c2d984913cdc6cf97ed9822c6ce1 524 Pfam PF01266 FAD dependent oxidoreductase 18 373 6.1E-53 T 22-04-2016 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 SRM_RS08560 57f2c2d984913cdc6cf97ed9822c6ce1 524 Pfam PF16901 C-terminal domain of alpha-glycerophosphate oxidase 418 496 2.1E-16 T 22-04-2016 IPR031656 Alpha-glycerophosphate oxidase, C-terminal KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952 SRM_RS08560 57f2c2d984913cdc6cf97ed9822c6ce1 524 PANTHER PTHR11985 3 509 1.1E-218 T 22-04-2016 SRM_RS08560 57f2c2d984913cdc6cf97ed9822c6ce1 524 Gene3D G3DSA:3.50.50.60 17 280 2.3E-44 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SRM_RS08560 57f2c2d984913cdc6cf97ed9822c6ce1 524 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 30 40 1.5E-29 T 22-04-2016 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952 SRM_RS08560 57f2c2d984913cdc6cf97ed9822c6ce1 524 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 363 375 1.5E-29 T 22-04-2016 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952 SRM_RS08560 57f2c2d984913cdc6cf97ed9822c6ce1 524 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 331 337 1.5E-29 T 22-04-2016 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952 SRM_RS08560 57f2c2d984913cdc6cf97ed9822c6ce1 524 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 17 29 1.5E-29 T 22-04-2016 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952 SRM_RS08560 57f2c2d984913cdc6cf97ed9822c6ce1 524 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 91 103 1.5E-29 T 22-04-2016 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952 SRM_RS08560 57f2c2d984913cdc6cf97ed9822c6ce1 524 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 46 58 1.5E-29 T 22-04-2016 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952 SRM_RS08560 57f2c2d984913cdc6cf97ed9822c6ce1 524 SUPERFAMILY SSF51905 17 341 6.05E-39 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SRM_RS01770 0b55a3aeee3e50f8dccb279e3dc0e985 162 PANTHER PTHR39550 2 162 1.8E-30 T 22-04-2016 SRM_RS01770 0b55a3aeee3e50f8dccb279e3dc0e985 162 Pfam PF11848 Domain of unknown function (DUF3368) 116 158 8.7E-8 T 22-04-2016 IPR021799 Protein of unknown function DUF3368 SRM_RS03050 443d3351ed29d033d3fff8a3fcf043a1 360 Gene3D G3DSA:3.90.660.10 160 299 8.2E-30 T 22-04-2016 SRM_RS03050 443d3351ed29d033d3fff8a3fcf043a1 360 PANTHER PTHR10742 2 360 3.0E-39 T 22-04-2016 SRM_RS03050 443d3351ed29d033d3fff8a3fcf043a1 360 SUPERFAMILY SSF54373 201 298 7.2E-20 T 22-04-2016 SRM_RS03050 443d3351ed29d033d3fff8a3fcf043a1 360 Gene3D G3DSA:3.90.660.10 35 104 3.1E-10 T 22-04-2016 SRM_RS03050 443d3351ed29d033d3fff8a3fcf043a1 360 Gene3D G3DSA:3.50.50.60 119 159 1.1E-12 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SRM_RS03050 443d3351ed29d033d3fff8a3fcf043a1 360 Gene3D G3DSA:3.50.50.60 4 34 1.1E-12 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SRM_RS03050 443d3351ed29d033d3fff8a3fcf043a1 360 SUPERFAMILY SSF51905 5 220 3.89E-36 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SRM_RS03050 443d3351ed29d033d3fff8a3fcf043a1 360 SUPERFAMILY SSF51905 319 359 3.89E-36 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SRM_RS03050 443d3351ed29d033d3fff8a3fcf043a1 360 Pfam PF13450 NAD(P)-binding Rossmann-like domain 9 76 1.9E-15 T 22-04-2016 SRM_RS03050 443d3351ed29d033d3fff8a3fcf043a1 360 Pfam PF01593 Flavin containing amine oxidoreductase 112 359 1.2E-30 T 22-04-2016 IPR002937 Amine oxidase GO:0016491|GO:0055114 SRM_RS10945 5f70e3239caad0f59df04d0644a01287 498 SUPERFAMILY SSF51905 5 249 2.86E-47 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SRM_RS10945 5f70e3239caad0f59df04d0644a01287 498 SUPERFAMILY SSF51905 335 387 2.86E-47 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SRM_RS10945 5f70e3239caad0f59df04d0644a01287 498 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 8 27 1.5E-7 T 22-04-2016 SRM_RS10945 5f70e3239caad0f59df04d0644a01287 498 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 334 356 1.5E-7 T 22-04-2016 SRM_RS10945 5f70e3239caad0f59df04d0644a01287 498 Gene3D G3DSA:3.50.50.60 328 387 1.0E-79 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SRM_RS10945 5f70e3239caad0f59df04d0644a01287 498 Gene3D G3DSA:3.50.50.60 2 229 1.0E-79 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SRM_RS10945 5f70e3239caad0f59df04d0644a01287 498 PANTHER PTHR11632:SF27 1 490 6.6E-167 T 22-04-2016 SRM_RS10945 5f70e3239caad0f59df04d0644a01287 498 Pfam PF00890 FAD binding domain 7 371 1.1E-69 T 22-04-2016 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain SRM_RS10945 5f70e3239caad0f59df04d0644a01287 498 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 349 356 1.2E-6 T 22-04-2016 SRM_RS10945 5f70e3239caad0f59df04d0644a01287 498 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 7 29 1.2E-6 T 22-04-2016 SRM_RS10945 5f70e3239caad0f59df04d0644a01287 498 PANTHER PTHR11632 1 490 6.6E-167 T 22-04-2016 SRM_RS10945 5f70e3239caad0f59df04d0644a01287 498 Gene3D G3DSA:3.90.700.10 230 327 5.4E-29 T 22-04-2016 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain SRM_RS10945 5f70e3239caad0f59df04d0644a01287 498 Pfam PF02910 Fumarate reductase flavoprotein C-term 416 490 2.5E-5 T 22-04-2016 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal GO:0016491|GO:0055114 SRM_RS10945 5f70e3239caad0f59df04d0644a01287 498 SUPERFAMILY SSF56425 224 331 3.74E-29 T 22-04-2016 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain SRM_RS10945 5f70e3239caad0f59df04d0644a01287 498 SUPERFAMILY SSF46977 414 493 8.63E-13 T 22-04-2016 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal GO:0016491|GO:0055114 SRM_RS10945 5f70e3239caad0f59df04d0644a01287 498 Gene3D G3DSA:1.20.58.100 413 488 3.1E-13 T 22-04-2016 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal GO:0016491|GO:0055114 SRM_RS10485 1085b27f1202ae4846500fbc08693386 466 PANTHER PTHR24423 23 53 3.2E-47 T 22-04-2016 SRM_RS10485 1085b27f1202ae4846500fbc08693386 466 PANTHER PTHR24423 246 466 3.2E-47 T 22-04-2016 SRM_RS10485 1085b27f1202ae4846500fbc08693386 466 SMART SM00388 248 314 6.9E-6 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SRM_RS10485 1085b27f1202ae4846500fbc08693386 466 PRINTS PR00344 Bacterial sensor protein C-terminal signature 448 461 3.4E-16 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SRM_RS10485 1085b27f1202ae4846500fbc08693386 466 PRINTS PR00344 Bacterial sensor protein C-terminal signature 422 440 3.4E-16 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SRM_RS10485 1085b27f1202ae4846500fbc08693386 466 PRINTS PR00344 Bacterial sensor protein C-terminal signature 411 421 3.4E-16 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SRM_RS10485 1085b27f1202ae4846500fbc08693386 466 PRINTS PR00344 Bacterial sensor protein C-terminal signature 393 407 3.4E-16 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SRM_RS10485 1085b27f1202ae4846500fbc08693386 466 SMART SM00387 355 464 1.7E-22 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SRM_RS10485 1085b27f1202ae4846500fbc08693386 466 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 363 462 3.7E-17 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SRM_RS10485 1085b27f1202ae4846500fbc08693386 466 SUPERFAMILY SSF47384 244 308 2.16E-7 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SRM_RS10485 1085b27f1202ae4846500fbc08693386 466 SUPERFAMILY SSF55874 312 462 7.86E-34 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SRM_RS10485 1085b27f1202ae4846500fbc08693386 466 Gene3D G3DSA:3.30.565.10 314 461 8.8E-35 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SRM_RS10485 1085b27f1202ae4846500fbc08693386 466 Gene3D G3DSA:1.10.287.130 246 307 4.0E-7 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SRM_RS14065 3151a8e352eee4621956a3edf7b1d64f 218 SUPERFAMILY SSF52540 5 212 1.15E-42 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SRM_RS14065 3151a8e352eee4621956a3edf7b1d64f 218 Pfam PF00005 ABC transporter 21 165 3.4E-23 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 SRM_RS14065 3151a8e352eee4621956a3edf7b1d64f 218 SMART SM00382 30 214 1.1E-12 T 22-04-2016 IPR003593 AAA+ ATPase domain SRM_RS14065 3151a8e352eee4621956a3edf7b1d64f 218 Gene3D G3DSA:3.40.50.300 3 210 5.2E-45 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SRM_RS14065 3151a8e352eee4621956a3edf7b1d64f 218 PANTHER PTHR24220 6 210 4.1E-45 T 22-04-2016 SRM_RS12760 c7c757758080ee62143513be3b7035e5 544 Gene3D G3DSA:1.10.287.70 7 89 5.8E-4 T 22-04-2016 SRM_RS12760 c7c757758080ee62143513be3b7035e5 544 Gene3D G3DSA:3.40.50.720 336 461 1.1E-23 T 22-04-2016 IPR016040 NAD(P)-binding domain SRM_RS12760 c7c757758080ee62143513be3b7035e5 544 PANTHER PTHR16254 304 484 3.1E-23 T 22-04-2016 SRM_RS12760 c7c757758080ee62143513be3b7035e5 544 SUPERFAMILY SSF81324 3 94 1.96E-5 T 22-04-2016 SRM_RS12760 c7c757758080ee62143513be3b7035e5 544 SUPERFAMILY SSF51735 337 462 2.6E-24 T 22-04-2016 IPR016040 NAD(P)-binding domain SRM_RS12760 c7c757758080ee62143513be3b7035e5 544 SUPERFAMILY SSF116726 471 542 2.35E-11 T 22-04-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 SRM_RS12760 c7c757758080ee62143513be3b7035e5 544 SUPERFAMILY SSF51735 109 238 1.18E-14 T 22-04-2016 IPR016040 NAD(P)-binding domain SRM_RS12760 c7c757758080ee62143513be3b7035e5 544 Gene3D G3DSA:3.30.70.1450 475 542 1.0E-14 T 22-04-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 SRM_RS12760 c7c757758080ee62143513be3b7035e5 544 Gene3D G3DSA:3.30.70.1450 254 328 1.9E-13 T 22-04-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 SRM_RS12760 c7c757758080ee62143513be3b7035e5 544 PANTHER PTHR16254:SF21 304 484 3.1E-23 T 22-04-2016 SRM_RS12760 c7c757758080ee62143513be3b7035e5 544 Pfam PF02080 TrkA-C domain 258 327 1.2E-8 T 22-04-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 SRM_RS12760 c7c757758080ee62143513be3b7035e5 544 Pfam PF02080 TrkA-C domain 480 542 2.2E-10 T 22-04-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 SRM_RS12760 c7c757758080ee62143513be3b7035e5 544 Gene3D G3DSA:3.40.50.720 109 237 6.6E-19 T 22-04-2016 IPR016040 NAD(P)-binding domain SRM_RS12760 c7c757758080ee62143513be3b7035e5 544 Pfam PF02254 TrkA-N domain 340 445 8.2E-19 T 22-04-2016 IPR003148 Regulator of K+ conductance, N-terminal GO:0006813 SRM_RS12760 c7c757758080ee62143513be3b7035e5 544 Pfam PF02254 TrkA-N domain 123 226 2.1E-13 T 22-04-2016 IPR003148 Regulator of K+ conductance, N-terminal GO:0006813 SRM_RS12760 c7c757758080ee62143513be3b7035e5 544 SUPERFAMILY SSF116726 249 327 3.66E-12 T 22-04-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 SRM_RS13655 1cf7f419c90386d1e839f485f95f3b6e 581 SUPERFAMILY SSF51905 357 415 2.96E-68 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SRM_RS13655 1cf7f419c90386d1e839f485f95f3b6e 581 SUPERFAMILY SSF51905 7 261 2.96E-68 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SRM_RS13655 1cf7f419c90386d1e839f485f95f3b6e 581 SUPERFAMILY SSF46977 438 558 1.22E-30 T 22-04-2016 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal GO:0016491|GO:0055114 SRM_RS13655 1cf7f419c90386d1e839f485f95f3b6e 581 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 357 379 1.2E-5 T 22-04-2016 SRM_RS13655 1cf7f419c90386d1e839f485f95f3b6e 581 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 14 33 1.2E-5 T 22-04-2016 SRM_RS13655 1cf7f419c90386d1e839f485f95f3b6e 581 PANTHER PTHR11632 8 575 3.7E-196 T 22-04-2016 SRM_RS13655 1cf7f419c90386d1e839f485f95f3b6e 581 Gene3D G3DSA:3.50.50.60 7 240 1.5E-97 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SRM_RS13655 1cf7f419c90386d1e839f485f95f3b6e 581 Gene3D G3DSA:3.50.50.60 349 411 1.5E-97 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SRM_RS13655 1cf7f419c90386d1e839f485f95f3b6e 581 Pfam PF00890 FAD binding domain 14 393 1.3E-94 T 22-04-2016 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain SRM_RS13655 1cf7f419c90386d1e839f485f95f3b6e 581 Gene3D G3DSA:3.90.700.10 241 348 4.1E-37 T 22-04-2016 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain SRM_RS13655 1cf7f419c90386d1e839f485f95f3b6e 581 SUPERFAMILY SSF56425 234 353 3.74E-38 T 22-04-2016 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain SRM_RS13655 1cf7f419c90386d1e839f485f95f3b6e 581 Gene3D G3DSA:1.20.58.100 419 533 1.0E-27 T 22-04-2016 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal GO:0016491|GO:0055114 SRM_RS13655 1cf7f419c90386d1e839f485f95f3b6e 581 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 13 35 4.2E-5 T 22-04-2016 SRM_RS13655 1cf7f419c90386d1e839f485f95f3b6e 581 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 372 379 4.2E-5 T 22-04-2016 SRM_RS13655 1cf7f419c90386d1e839f485f95f3b6e 581 PIRSF PIRSF000171 3 556 1.1E-45 T 22-04-2016 IPR030664 Succinate dehydrogenase/fumarate reductase, alpha/adenylylsulphate reductase subunit SRM_RS13655 1cf7f419c90386d1e839f485f95f3b6e 581 Pfam PF02910 Fumarate reductase flavoprotein C-term 449 534 2.5E-20 T 22-04-2016 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal GO:0016491|GO:0055114 SRM_RS13655 1cf7f419c90386d1e839f485f95f3b6e 581 PANTHER PTHR11632:SF56 8 575 3.7E-196 T 22-04-2016 SRM_RS14415 00f865e35b57d3621844e97954d9123c 263 Pfam PF13677 Membrane MotB of proton-channel complex MotA/MotB 26 67 1.4E-14 T 22-04-2016 IPR025713 Motility protein B, N-terminal domain SRM_RS14415 00f865e35b57d3621844e97954d9123c 263 SUPERFAMILY SSF103088 122 239 7.46E-27 T 22-04-2016 IPR006665 OmpA-like domain SRM_RS14415 00f865e35b57d3621844e97954d9123c 263 Pfam PF00691 OmpA family 133 233 2.0E-16 T 22-04-2016 IPR006665 OmpA-like domain SRM_RS14415 00f865e35b57d3621844e97954d9123c 263 Gene3D G3DSA:3.30.1330.60 115 239 1.0E-29 T 22-04-2016 IPR006665 OmpA-like domain SRM_RS14415 00f865e35b57d3621844e97954d9123c 263 PANTHER PTHR30329 21 262 5.3E-48 T 22-04-2016 SRM_RS14415 00f865e35b57d3621844e97954d9123c 263 PANTHER PTHR30329:SF4 21 262 5.3E-48 T 22-04-2016 SRM_RS14455 8df472d7b60777a005401ccf1e43d42a 366 Gene3D G3DSA:3.40.50.2300 1 114 5.9E-33 T 22-04-2016 SRM_RS14455 8df472d7b60777a005401ccf1e43d42a 366 SUPERFAMILY SSF52172 1 114 5.98E-30 T 22-04-2016 IPR011006 CheY-like superfamily SRM_RS14455 8df472d7b60777a005401ccf1e43d42a 366 Pfam PF00072 Response regulator receiver domain 4 113 5.1E-24 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SRM_RS14455 8df472d7b60777a005401ccf1e43d42a 366 Gene3D G3DSA:3.40.50.180 170 360 9.5E-70 T 22-04-2016 IPR000673 Signal transduction response regulator, chemotaxis, protein-glutamate methylesterase GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 SRM_RS14455 8df472d7b60777a005401ccf1e43d42a 366 Hamap MF_00099 Chemotaxis response regulator protein-glutamate methylesterase [cheB]. 2 361 36.785 T 22-04-2016 IPR008248 Signal transduction response regulator, chemotaxis, CheB GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 SRM_RS14455 8df472d7b60777a005401ccf1e43d42a 366 SMART SM00448 2 116 4.9E-30 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SRM_RS14455 8df472d7b60777a005401ccf1e43d42a 366 SUPERFAMILY SSF52738 173 359 6.15E-60 T 22-04-2016 IPR000673 Signal transduction response regulator, chemotaxis, protein-glutamate methylesterase GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 SRM_RS14455 8df472d7b60777a005401ccf1e43d42a 366 PANTHER PTHR24421 2 357 5.1E-125 T 22-04-2016 SRM_RS14455 8df472d7b60777a005401ccf1e43d42a 366 Pfam PF01339 CheB methylesterase 178 354 5.5E-58 T 22-04-2016 IPR000673 Signal transduction response regulator, chemotaxis, protein-glutamate methylesterase GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 SRM_RS14455 8df472d7b60777a005401ccf1e43d42a 366 PIRSF PIRSF000876 1 364 1.6E-125 T 22-04-2016 IPR008248 Signal transduction response regulator, chemotaxis, CheB GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 SRM_RS14455 8df472d7b60777a005401ccf1e43d42a 366 PANTHER PTHR24421:SF16 2 357 5.1E-125 T 22-04-2016 SRM_RS09670 eda276ff731848cd9b61fa93eeb2f3fa 314 PANTHER PTHR22911 9 314 1.2E-50 T 22-04-2016 SRM_RS09670 eda276ff731848cd9b61fa93eeb2f3fa 314 SUPERFAMILY SSF103481 192 293 2.22E-13 T 22-04-2016 SRM_RS09670 eda276ff731848cd9b61fa93eeb2f3fa 314 PANTHER PTHR22911:SF27 9 314 1.2E-50 T 22-04-2016 SRM_RS09670 eda276ff731848cd9b61fa93eeb2f3fa 314 SUPERFAMILY SSF103481 40 143 1.03E-13 T 22-04-2016 SRM_RS09670 eda276ff731848cd9b61fa93eeb2f3fa 314 Pfam PF00892 EamA-like transporter family 9 139 5.7E-17 T 22-04-2016 IPR000620 EamA domain GO:0016020|GO:0016021 SRM_RS09670 eda276ff731848cd9b61fa93eeb2f3fa 314 Pfam PF00892 EamA-like transporter family 155 289 1.4E-13 T 22-04-2016 IPR000620 EamA domain GO:0016020|GO:0016021 SRM_RS12235 59d6821a5582948b1f396301bbf51be4 211 SUPERFAMILY SSF53448 37 164 6.19E-9 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases SRM_RS12235 59d6821a5582948b1f396301bbf51be4 211 Pfam PF09837 Uncharacterized protein conserved in bacteria (DUF2064) 16 122 4.4E-15 T 22-04-2016 IPR018641 Transferase 1, rSAM/selenodomain-associated SRM_RS12235 59d6821a5582948b1f396301bbf51be4 211 Gene3D G3DSA:3.90.550.10 24 110 2.4E-5 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases SRM_RS12235 59d6821a5582948b1f396301bbf51be4 211 PANTHER PTHR36529 12 187 4.5E-14 T 22-04-2016 SRM_RS12805 db728a6796b52cca7da4bf76e8ec4eea 1155 SMART SM00065 755 910 2.3E-11 T 22-04-2016 IPR003018 GAF domain GO:0005515 SRM_RS12805 db728a6796b52cca7da4bf76e8ec4eea 1155 Pfam PF01590 GAF domain 755 900 1.3E-8 T 22-04-2016 IPR003018 GAF domain GO:0005515 SRM_RS12805 db728a6796b52cca7da4bf76e8ec4eea 1155 Gene3D G3DSA:3.30.450.20 371 457 3.1E-35 T 22-04-2016 SRM_RS12805 db728a6796b52cca7da4bf76e8ec4eea 1155 Gene3D G3DSA:3.30.450.20 312 338 3.1E-35 T 22-04-2016 SRM_RS12805 db728a6796b52cca7da4bf76e8ec4eea 1155 Pfam PF13188 PAS domain 610 663 3.9E-5 T 22-04-2016 IPR000014 PAS domain SRM_RS12805 db728a6796b52cca7da4bf76e8ec4eea 1155 SMART SM00388 922 990 7.6E-19 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SRM_RS12805 db728a6796b52cca7da4bf76e8ec4eea 1155 SMART SM00387 1036 1148 1.1E-35 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SRM_RS12805 db728a6796b52cca7da4bf76e8ec4eea 1155 SUPERFAMILY SSF55785 375 476 1.93E-20 T 22-04-2016 IPR000014 PAS domain SRM_RS12805 db728a6796b52cca7da4bf76e8ec4eea 1155 Gene3D G3DSA:3.30.450.20 193 311 3.1E-21 T 22-04-2016 SRM_RS12805 db728a6796b52cca7da4bf76e8ec4eea 1155 Gene3D G3DSA:3.30.450.20 471 594 6.8E-17 T 22-04-2016 SRM_RS12805 db728a6796b52cca7da4bf76e8ec4eea 1155 SUPERFAMILY SSF55785 210 314 1.36E-19 T 22-04-2016 IPR000014 PAS domain SRM_RS12805 db728a6796b52cca7da4bf76e8ec4eea 1155 PRINTS PR00344 Bacterial sensor protein C-terminal signature 1108 1126 1.6E-13 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SRM_RS12805 db728a6796b52cca7da4bf76e8ec4eea 1155 PRINTS PR00344 Bacterial sensor protein C-terminal signature 1132 1145 1.6E-13 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SRM_RS12805 db728a6796b52cca7da4bf76e8ec4eea 1155 PRINTS PR00344 Bacterial sensor protein C-terminal signature 1073 1087 1.6E-13 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SRM_RS12805 db728a6796b52cca7da4bf76e8ec4eea 1155 PRINTS PR00344 Bacterial sensor protein C-terminal signature 1091 1101 1.6E-13 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SRM_RS12805 db728a6796b52cca7da4bf76e8ec4eea 1155 Pfam PF13426 PAS domain 218 313 2.0E-11 T 22-04-2016 IPR000014 PAS domain SRM_RS12805 db728a6796b52cca7da4bf76e8ec4eea 1155 Pfam PF13426 PAS domain 371 467 1.4E-13 T 22-04-2016 IPR000014 PAS domain SRM_RS12805 db728a6796b52cca7da4bf76e8ec4eea 1155 Pfam PF13426 PAS domain 508 596 0.0096 T 22-04-2016 IPR000014 PAS domain SRM_RS12805 db728a6796b52cca7da4bf76e8ec4eea 1155 PANTHER PTHR24423 380 466 1.6E-110 T 22-04-2016 SRM_RS12805 db728a6796b52cca7da4bf76e8ec4eea 1155 PANTHER PTHR24423 901 1155 1.6E-110 T 22-04-2016 SRM_RS12805 db728a6796b52cca7da4bf76e8ec4eea 1155 PANTHER PTHR24423 193 349 1.6E-110 T 22-04-2016 SRM_RS12805 db728a6796b52cca7da4bf76e8ec4eea 1155 SMART SM00086 272 314 4.6E-11 T 22-04-2016 IPR001610 PAC motif SRM_RS12805 db728a6796b52cca7da4bf76e8ec4eea 1155 SMART SM00086 557 597 0.59 T 22-04-2016 IPR001610 PAC motif SRM_RS12805 db728a6796b52cca7da4bf76e8ec4eea 1155 SMART SM00086 684 724 7.2 T 22-04-2016 IPR001610 PAC motif SRM_RS12805 db728a6796b52cca7da4bf76e8ec4eea 1155 SMART SM00086 426 468 0.0015 T 22-04-2016 IPR001610 PAC motif SRM_RS12805 db728a6796b52cca7da4bf76e8ec4eea 1155 SUPERFAMILY SSF55874 980 1146 1.57E-43 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SRM_RS12805 db728a6796b52cca7da4bf76e8ec4eea 1155 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 1037 1146 2.0E-23 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SRM_RS12805 db728a6796b52cca7da4bf76e8ec4eea 1155 Gene3D G3DSA:3.30.450.20 595 722 6.4E-19 T 22-04-2016 SRM_RS12805 db728a6796b52cca7da4bf76e8ec4eea 1155 SMART SM00091 347 420 0.35 T 22-04-2016 IPR000014 PAS domain SRM_RS12805 db728a6796b52cca7da4bf76e8ec4eea 1155 SMART SM00091 480 551 51.0 T 22-04-2016 IPR000014 PAS domain SRM_RS12805 db728a6796b52cca7da4bf76e8ec4eea 1155 SMART SM00091 201 269 0.0014 T 22-04-2016 IPR000014 PAS domain SRM_RS12805 db728a6796b52cca7da4bf76e8ec4eea 1155 SMART SM00091 609 679 1.1E-4 T 22-04-2016 IPR000014 PAS domain SRM_RS12805 db728a6796b52cca7da4bf76e8ec4eea 1155 SMART SM00091 279 345 130.0 T 22-04-2016 IPR000014 PAS domain SRM_RS12805 db728a6796b52cca7da4bf76e8ec4eea 1155 Gene3D G3DSA:1.10.287.130 915 986 9.1E-16 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SRM_RS12805 db728a6796b52cca7da4bf76e8ec4eea 1155 SUPERFAMILY SSF55785 594 722 8.05E-17 T 22-04-2016 IPR000014 PAS domain SRM_RS12805 db728a6796b52cca7da4bf76e8ec4eea 1155 Gene3D G3DSA:3.30.450.40 726 914 1.8E-15 T 22-04-2016 IPR029016 GAF domain-like SRM_RS12805 db728a6796b52cca7da4bf76e8ec4eea 1155 SUPERFAMILY SSF47384 909 991 1.06E-19 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SRM_RS12805 db728a6796b52cca7da4bf76e8ec4eea 1155 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 511 604 5.1E-8 T 22-04-2016 IPR000014 PAS domain SRM_RS12805 db728a6796b52cca7da4bf76e8ec4eea 1155 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 376 475 2.0E-15 T 22-04-2016 IPR000014 PAS domain SRM_RS12805 db728a6796b52cca7da4bf76e8ec4eea 1155 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 606 731 6.3E-10 T 22-04-2016 IPR000014 PAS domain SRM_RS12805 db728a6796b52cca7da4bf76e8ec4eea 1155 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 198 321 4.8E-16 T 22-04-2016 IPR000014 PAS domain SRM_RS12805 db728a6796b52cca7da4bf76e8ec4eea 1155 SUPERFAMILY SSF55781 755 909 1.57E-16 T 22-04-2016 IPR029016 GAF domain-like SRM_RS12805 db728a6796b52cca7da4bf76e8ec4eea 1155 Pfam PF00512 His Kinase A (phospho-acceptor) domain 923 990 2.6E-14 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SRM_RS12805 db728a6796b52cca7da4bf76e8ec4eea 1155 SUPERFAMILY SSF55785 465 595 1.4E-14 T 22-04-2016 IPR000014 PAS domain SRM_RS12805 db728a6796b52cca7da4bf76e8ec4eea 1155 Gene3D G3DSA:3.30.565.10 991 1149 1.1E-42 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SRM_RS09180 492c1532e0df96b0321b20d5bac3ba80 1064 SUPERFAMILY SSF48452 203 493 1.84E-18 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 SRM_RS09180 492c1532e0df96b0321b20d5bac3ba80 1064 SUPERFAMILY SSF48452 459 606 6.91E-21 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 SRM_RS09180 492c1532e0df96b0321b20d5bac3ba80 1064 SUPERFAMILY SSF48452 652 774 6.91E-21 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 SRM_RS09180 492c1532e0df96b0321b20d5bac3ba80 1064 Pfam PF14559 Tetratricopeptide repeat 216 273 1.1E-6 T 22-04-2016 SRM_RS09180 492c1532e0df96b0321b20d5bac3ba80 1064 SUPERFAMILY SSF81901 720 973 1.23E-18 T 22-04-2016 SRM_RS09180 492c1532e0df96b0321b20d5bac3ba80 1064 Pfam PF13525 Outer membrane lipoprotein 770 876 9.9E-7 T 22-04-2016 SRM_RS09180 492c1532e0df96b0321b20d5bac3ba80 1064 SMART SM00028 459 492 1.3 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 SRM_RS09180 492c1532e0df96b0321b20d5bac3ba80 1064 SMART SM00028 978 1011 97.0 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 SRM_RS09180 492c1532e0df96b0321b20d5bac3ba80 1064 SMART SM00028 867 900 3.6 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 SRM_RS09180 492c1532e0df96b0321b20d5bac3ba80 1064 SMART SM00028 905 938 150.0 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 SRM_RS09180 492c1532e0df96b0321b20d5bac3ba80 1064 SMART SM00028 613 646 200.0 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 SRM_RS09180 492c1532e0df96b0321b20d5bac3ba80 1064 SMART SM00028 719 752 0.052 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 SRM_RS09180 492c1532e0df96b0321b20d5bac3ba80 1064 SMART SM00028 129 162 450.0 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 SRM_RS09180 492c1532e0df96b0321b20d5bac3ba80 1064 SMART SM00028 313 346 0.84 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 SRM_RS09180 492c1532e0df96b0321b20d5bac3ba80 1064 SMART SM00028 942 975 13.0 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 SRM_RS09180 492c1532e0df96b0321b20d5bac3ba80 1064 SMART SM00028 1016 1049 8.7 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 SRM_RS09180 492c1532e0df96b0321b20d5bac3ba80 1064 SMART SM00028 350 383 230.0 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 SRM_RS09180 492c1532e0df96b0321b20d5bac3ba80 1064 SMART SM00028 240 273 19.0 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 SRM_RS09180 492c1532e0df96b0321b20d5bac3ba80 1064 SMART SM00028 497 530 320.0 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 SRM_RS09180 492c1532e0df96b0321b20d5bac3ba80 1064 SMART SM00028 830 863 0.0071 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 SRM_RS09180 492c1532e0df96b0321b20d5bac3ba80 1064 SMART SM00028 203 236 0.064 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 SRM_RS09180 492c1532e0df96b0321b20d5bac3ba80 1064 SMART SM00028 571 604 17.0 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 SRM_RS09180 492c1532e0df96b0321b20d5bac3ba80 1064 SMART SM00028 422 455 13.0 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 SRM_RS09180 492c1532e0df96b0321b20d5bac3ba80 1064 SMART SM00028 682 715 0.37 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 SRM_RS09180 492c1532e0df96b0321b20d5bac3ba80 1064 Gene3D G3DSA:1.25.40.10 436 487 8.2E-7 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 SRM_RS09180 492c1532e0df96b0321b20d5bac3ba80 1064 Pfam PF13432 Tetratricopeptide repeat 283 346 0.0067 T 22-04-2016 SRM_RS09180 492c1532e0df96b0321b20d5bac3ba80 1064 Pfam PF13432 Tetratricopeptide repeat 982 1047 1.5E-4 T 22-04-2016 SRM_RS09180 492c1532e0df96b0321b20d5bac3ba80 1064 Pfam PF13432 Tetratricopeptide repeat 101 163 1.3E-5 T 22-04-2016 SRM_RS09180 492c1532e0df96b0321b20d5bac3ba80 1064 Pfam PF13432 Tetratricopeptide repeat 502 568 2.2E-8 T 22-04-2016 SRM_RS09180 492c1532e0df96b0321b20d5bac3ba80 1064 Pfam PF13432 Tetratricopeptide repeat 650 705 9.4E-12 T 22-04-2016 SRM_RS09180 492c1532e0df96b0321b20d5bac3ba80 1064 Pfam PF13432 Tetratricopeptide repeat 426 491 1.2E-6 T 22-04-2016 SRM_RS09180 492c1532e0df96b0321b20d5bac3ba80 1064 Pfam PF13432 Tetratricopeptide repeat 170 211 6.4E-5 T 22-04-2016 SRM_RS09180 492c1532e0df96b0321b20d5bac3ba80 1064 Pfam PF13432 Tetratricopeptide repeat 909 974 1.0E-9 T 22-04-2016 SRM_RS09180 492c1532e0df96b0321b20d5bac3ba80 1064 Pfam PF13432 Tetratricopeptide repeat 575 640 1.0E-8 T 22-04-2016 SRM_RS09180 492c1532e0df96b0321b20d5bac3ba80 1064 PANTHER PTHR23083 830 1044 7.5E-49 T 22-04-2016 SRM_RS09180 492c1532e0df96b0321b20d5bac3ba80 1064 PANTHER PTHR23083 130 346 7.5E-49 T 22-04-2016 SRM_RS09180 492c1532e0df96b0321b20d5bac3ba80 1064 PANTHER PTHR23083 677 715 7.5E-49 T 22-04-2016 SRM_RS09180 492c1532e0df96b0321b20d5bac3ba80 1064 PANTHER PTHR23083 418 487 7.5E-49 T 22-04-2016 SRM_RS09180 492c1532e0df96b0321b20d5bac3ba80 1064 Gene3D G3DSA:1.25.40.10 498 775 1.4E-29 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 SRM_RS09180 492c1532e0df96b0321b20d5bac3ba80 1064 Gene3D G3DSA:1.25.40.10 796 1045 7.5E-34 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 SRM_RS09180 492c1532e0df96b0321b20d5bac3ba80 1064 Gene3D G3DSA:1.25.40.10 195 435 1.7E-23 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 SRM_RS09180 492c1532e0df96b0321b20d5bac3ba80 1064 SUPERFAMILY SSF48452 944 1051 2.37E-13 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 SRM_RS09180 492c1532e0df96b0321b20d5bac3ba80 1064 Pfam PF13174 Tetratricopeptide repeat 720 751 0.001 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 SRM_RS09180 492c1532e0df96b0321b20d5bac3ba80 1064 SUPERFAMILY SSF48452 84 194 2.59E-6 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 SRM_RS09180 492c1532e0df96b0321b20d5bac3ba80 1064 Gene3D G3DSA:1.25.40.10 102 192 1.0E-4 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 SRM_RS06835 b365cd500448d54e5b62eb3821cbe049 259 Gene3D G3DSA:3.90.470.20 38 136 2.6E-27 T 22-04-2016 IPR008278 4'-phosphopantetheinyl transferase superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1 SRM_RS06835 b365cd500448d54e5b62eb3821cbe049 259 SUPERFAMILY SSF56214 41 116 7.15E-19 T 22-04-2016 IPR008278 4'-phosphopantetheinyl transferase superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1 SRM_RS06835 b365cd500448d54e5b62eb3821cbe049 259 TIGRFAM TIGR00556 pantethn_trn: phosphopantetheine--protein transferase domain 122 192 1.6E-12 T 22-04-2016 IPR004568 Phosphopantetheine-protein transferase domain GO:0000287|GO:0006633|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1 SRM_RS06835 b365cd500448d54e5b62eb3821cbe049 259 PANTHER PTHR12215 42 188 3.6E-37 T 22-04-2016 SRM_RS06835 b365cd500448d54e5b62eb3821cbe049 259 Gene3D G3DSA:3.90.470.20 137 235 5.5E-17 T 22-04-2016 IPR008278 4'-phosphopantetheinyl transferase superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1 SRM_RS06835 b365cd500448d54e5b62eb3821cbe049 259 Pfam PF01648 4'-phosphopantetheinyl transferase superfamily 124 191 1.0E-14 T 22-04-2016 IPR008278 4'-phosphopantetheinyl transferase superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1 SRM_RS06835 b365cd500448d54e5b62eb3821cbe049 259 PANTHER PTHR12215:SF10 42 188 3.6E-37 T 22-04-2016 SRM_RS06835 b365cd500448d54e5b62eb3821cbe049 259 SUPERFAMILY SSF56214 123 239 8.63E-19 T 22-04-2016 IPR008278 4'-phosphopantetheinyl transferase superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1 SRM_RS08030 3ea09b26e418db358f9a43a2c9a2d38f 475 Gene3D G3DSA:3.30.300.30 375 473 6.5E-21 T 22-04-2016 SRM_RS08030 3ea09b26e418db358f9a43a2c9a2d38f 475 PANTHER PTHR24096:SF109 15 474 7.1E-99 T 22-04-2016 SRM_RS08030 3ea09b26e418db358f9a43a2c9a2d38f 475 TIGRFAM TIGR01923 menE: O-succinylbenzoate-CoA ligase 32 466 2.4E-102 T 22-04-2016 IPR010192 2-succinylbenzoate--CoA ligase GO:0005524|GO:0008756|GO:0009234 KEGG: 00130+6.2.1.26|MetaCyc: PWY-5837|UniPathway: UPA00079|UniPathway: UPA01057 SRM_RS08030 3ea09b26e418db358f9a43a2c9a2d38f 475 Gene3D G3DSA:3.40.50.980 12 160 2.0E-24 T 22-04-2016 SRM_RS08030 3ea09b26e418db358f9a43a2c9a2d38f 475 Pfam PF00501 AMP-binding enzyme 12 380 2.8E-57 T 22-04-2016 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 SRM_RS08030 3ea09b26e418db358f9a43a2c9a2d38f 475 Gene3D G3DSA:2.30.38.10 318 373 3.0E-8 T 22-04-2016 SRM_RS08030 3ea09b26e418db358f9a43a2c9a2d38f 475 Gene3D G3DSA:3.40.50.980 161 304 2.3E-25 T 22-04-2016 SRM_RS08030 3ea09b26e418db358f9a43a2c9a2d38f 475 SUPERFAMILY SSF56801 11 473 7.06E-103 T 22-04-2016 SRM_RS08030 3ea09b26e418db358f9a43a2c9a2d38f 475 PANTHER PTHR24096 15 474 7.1E-99 T 22-04-2016 SRM_RS08030 3ea09b26e418db358f9a43a2c9a2d38f 475 Pfam PF13193 AMP-binding enzyme C-terminal domain 389 453 2.5E-9 T 22-04-2016 IPR025110 AMP-binding enzyme C-terminal domain SRM_RS10875 d6281b62a8602879952ad946bc7bb83a 209 TIGRFAM TIGR02150 IPP_isom_1: isopentenyl-diphosphate delta-isomerase 32 189 1.1E-33 T 22-04-2016 IPR011876 Isopentenyl-diphosphate delta-isomerase, type 1 GO:0004452|GO:0008299 KEGG: 00900+5.3.3.2|MetaCyc: PWY-5123|MetaCyc: PWY-6174|MetaCyc: PWY-6383|MetaCyc: PWY-6859|MetaCyc: PWY-7102|MetaCyc: PWY-7391|MetaCyc: PWY-7524|MetaCyc: PWY-7560|MetaCyc: PWY-922|Reactome: REACT_22258|UniPathway: UPA00059 SRM_RS10875 d6281b62a8602879952ad946bc7bb83a 209 Pfam PF00293 NUDIX domain 56 186 4.6E-18 T 22-04-2016 IPR000086 NUDIX hydrolase domain GO:0016787 SRM_RS10875 d6281b62a8602879952ad946bc7bb83a 209 Gene3D G3DSA:3.90.79.10 29 191 1.1E-45 T 22-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 SRM_RS10875 d6281b62a8602879952ad946bc7bb83a 209 PANTHER PTHR10885 32 187 7.6E-40 T 22-04-2016 IPR011876 Isopentenyl-diphosphate delta-isomerase, type 1 GO:0004452|GO:0008299 KEGG: 00900+5.3.3.2|MetaCyc: PWY-5123|MetaCyc: PWY-6174|MetaCyc: PWY-6383|MetaCyc: PWY-6859|MetaCyc: PWY-7102|MetaCyc: PWY-7391|MetaCyc: PWY-7524|MetaCyc: PWY-7560|MetaCyc: PWY-922|Reactome: REACT_22258|UniPathway: UPA00059 SRM_RS10875 d6281b62a8602879952ad946bc7bb83a 209 Hamap MF_00202 Isopentenyl-diphosphate Delta-isomerase [idi]. 30 201 30.88 T 22-04-2016 IPR011876 Isopentenyl-diphosphate delta-isomerase, type 1 GO:0004452|GO:0008299 KEGG: 00900+5.3.3.2|MetaCyc: PWY-5123|MetaCyc: PWY-6174|MetaCyc: PWY-6383|MetaCyc: PWY-6859|MetaCyc: PWY-7102|MetaCyc: PWY-7391|MetaCyc: PWY-7524|MetaCyc: PWY-7560|MetaCyc: PWY-922|Reactome: REACT_22258|UniPathway: UPA00059 SRM_RS10875 d6281b62a8602879952ad946bc7bb83a 209 SUPERFAMILY SSF55811 32 193 6.5E-42 T 22-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 SRM_RS09135 42fd2400f4163aa7711049d7dad4947c 259 Gene3D G3DSA:3.30.1060.10 70 228 2.7E-63 T 22-04-2016 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 SRM_RS09135 42fd2400f4163aa7711049d7dad4947c 259 PANTHER PTHR10173:SF6 69 224 2.7E-56 T 22-04-2016 SRM_RS09135 42fd2400f4163aa7711049d7dad4947c 259 Hamap MF_01401 Peptide methionine sulfoxide reductase MsrA [msrA]. 78 235 32.913 T 22-04-2016 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 SRM_RS09135 42fd2400f4163aa7711049d7dad4947c 259 SUPERFAMILY SSF55068 78 240 2.62E-66 T 22-04-2016 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 SRM_RS09135 42fd2400f4163aa7711049d7dad4947c 259 Pfam PF01625 Peptide methionine sulfoxide reductase 80 229 1.4E-56 T 22-04-2016 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 SRM_RS09135 42fd2400f4163aa7711049d7dad4947c 259 TIGRFAM TIGR00401 msrA: peptide-methionine (S)-S-oxide reductase 80 228 2.8E-52 T 22-04-2016 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 SRM_RS09135 42fd2400f4163aa7711049d7dad4947c 259 PANTHER PTHR10173 69 224 2.7E-56 T 22-04-2016 IPR028427 Peptide methionine sulfoxide reductase GO:0006979|GO:0016671|GO:0030091 SRM_RS12615 5cc456bc3bc61e608b339199d94c1b6f 248 PANTHER PTHR18901 1 240 1.0E-23 T 22-04-2016 SRM_RS12615 5cc456bc3bc61e608b339199d94c1b6f 248 Pfam PF13419 Haloacid dehalogenase-like hydrolase 10 202 6.4E-22 T 22-04-2016 IPR023214 HAD-like domain SRM_RS12615 5cc456bc3bc61e608b339199d94c1b6f 248 SUPERFAMILY SSF56784 7 236 2.1E-39 T 22-04-2016 IPR023214 HAD-like domain SRM_RS12615 5cc456bc3bc61e608b339199d94c1b6f 248 Gene3D G3DSA:3.40.50.1000 7 22 3.6E-27 T 22-04-2016 IPR023214 HAD-like domain SRM_RS12615 5cc456bc3bc61e608b339199d94c1b6f 248 Gene3D G3DSA:3.40.50.1000 100 238 3.6E-27 T 22-04-2016 IPR023214 HAD-like domain SRM_RS12615 5cc456bc3bc61e608b339199d94c1b6f 248 PANTHER PTHR18901:SF14 1 240 1.0E-23 T 22-04-2016 SRM_RS13900 f227e9d7fbb5bf46bec1008e2aaf85f8 383 Gene3D G3DSA:2.40.30.10 286 369 1.0E-18 T 22-04-2016 SRM_RS13900 f227e9d7fbb5bf46bec1008e2aaf85f8 383 Gene3D G3DSA:2.30.30.280 231 284 9.1E-15 T 22-04-2016 IPR023382 Adenine nucleotide alpha hydrolase-like domains GO:0016783 SRM_RS13900 f227e9d7fbb5bf46bec1008e2aaf85f8 383 SUPERFAMILY SSF52402 1 256 2.07E-54 T 22-04-2016 SRM_RS13900 f227e9d7fbb5bf46bec1008e2aaf85f8 383 PANTHER PTHR11933:SF10 1 367 8.1E-158 T 22-04-2016 SRM_RS13900 f227e9d7fbb5bf46bec1008e2aaf85f8 383 Hamap MF_00144 tRNA-specific 2-thiouridylase MnmA [mnmA]. 5 365 39.929 T 22-04-2016 IPR004506 tRNA-specific 2-thiouridylase GO:0008033|GO:0016740 SRM_RS13900 f227e9d7fbb5bf46bec1008e2aaf85f8 383 PANTHER PTHR11933 1 367 8.1E-158 T 22-04-2016 IPR004506 tRNA-specific 2-thiouridylase GO:0008033|GO:0016740 SRM_RS13900 f227e9d7fbb5bf46bec1008e2aaf85f8 383 TIGRFAM TIGR00420 trmU: tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase 6 364 3.3E-98 T 22-04-2016 IPR004506 tRNA-specific 2-thiouridylase GO:0008033|GO:0016740 SRM_RS13900 f227e9d7fbb5bf46bec1008e2aaf85f8 383 Pfam PF03054 tRNA methyl transferase 6 364 9.5E-111 T 22-04-2016 SRM_RS13900 f227e9d7fbb5bf46bec1008e2aaf85f8 383 Gene3D G3DSA:3.40.50.620 2 218 7.4E-83 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold SRM_RS14405 335d65718bbf3215861385582683e3e8 372 TIGRFAM TIGR01397 fliM_switch: flagellar motor switch protein FliM 5 328 5.9E-82 T 22-04-2016 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 SRM_RS14405 335d65718bbf3215861385582683e3e8 372 Pfam PF02154 Flagellar motor switch protein FliM 46 232 4.1E-48 T 22-04-2016 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 SRM_RS14405 335d65718bbf3215861385582683e3e8 372 PRINTS PR00955 Flagellar motor switch protein FliM signature 218 236 7.2E-15 T 22-04-2016 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 SRM_RS14405 335d65718bbf3215861385582683e3e8 372 PRINTS PR00955 Flagellar motor switch protein FliM signature 2 15 7.2E-15 T 22-04-2016 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 SRM_RS14405 335d65718bbf3215861385582683e3e8 372 PRINTS PR00955 Flagellar motor switch protein FliM signature 122 141 7.2E-15 T 22-04-2016 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 SRM_RS14405 335d65718bbf3215861385582683e3e8 372 PRINTS PR00955 Flagellar motor switch protein FliM signature 97 113 7.2E-15 T 22-04-2016 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 SRM_RS14405 335d65718bbf3215861385582683e3e8 372 Pfam PF01052 Type III flagellar switch regulator (C-ring) FliN C-term 260 327 8.4E-23 T 22-04-2016 IPR001543 Surface presentation of antigen (SpoA) SRM_RS14405 335d65718bbf3215861385582683e3e8 372 Gene3D G3DSA:2.30.330.10 251 333 1.3E-17 T 22-04-2016 SRM_RS14405 335d65718bbf3215861385582683e3e8 372 PIRSF PIRSF002888 1 338 1.8E-115 T 22-04-2016 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 SRM_RS14405 335d65718bbf3215861385582683e3e8 372 PANTHER PTHR30034 1 349 2.8E-85 T 22-04-2016 SRM_RS14405 335d65718bbf3215861385582683e3e8 372 SUPERFAMILY SSF103039 53 234 5.23E-14 T 22-04-2016 IPR028976 CheC-like domain SRM_RS14405 335d65718bbf3215861385582683e3e8 372 PANTHER PTHR30034:SF0 1 349 2.8E-85 T 22-04-2016 SRM_RS14405 335d65718bbf3215861385582683e3e8 372 SUPERFAMILY SSF101801 257 332 1.7E-16 T 22-04-2016 IPR001543 Surface presentation of antigen (SpoA) SRM_RS06945 e83e16b08283e4b2f4ff3caa8228b123 707 SMART SM00889 468 607 1.3E-47 T 22-04-2016 IPR005517 Translation elongation factor EFG/EF2, domain IV GO:0005525 SRM_RS06945 e83e16b08283e4b2f4ff3caa8228b123 707 Gene3D G3DSA:3.30.70.240 608 694 4.1E-30 T 22-04-2016 IPR000640 Translation elongation factor EFG, V domain SRM_RS06945 e83e16b08283e4b2f4ff3caa8228b123 707 Gene3D G3DSA:3.30.70.870 393 468 9.3E-21 T 22-04-2016 SRM_RS06945 e83e16b08283e4b2f4ff3caa8228b123 707 SUPERFAMILY SSF54980 612 700 6.83E-26 T 22-04-2016 IPR009022 Elongation factor G, III-V domain SRM_RS06945 e83e16b08283e4b2f4ff3caa8228b123 707 SUPERFAMILY SSF54211 467 608 4.05E-31 T 22-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold SRM_RS06945 e83e16b08283e4b2f4ff3caa8228b123 707 Pfam PF00009 Elongation factor Tu GTP binding domain 8 275 5.1E-41 T 22-04-2016 SRM_RS06945 e83e16b08283e4b2f4ff3caa8228b123 707 Pfam PF03764 Elongation factor G, domain IV 467 606 1.3E-27 T 22-04-2016 IPR005517 Translation elongation factor EFG/EF2, domain IV GO:0005525 SRM_RS06945 e83e16b08283e4b2f4ff3caa8228b123 707 Gene3D G3DSA:3.40.50.300 3 279 9.7E-71 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SRM_RS06945 e83e16b08283e4b2f4ff3caa8228b123 707 PANTHER PTHR23115 249 508 2.1E-211 T 22-04-2016 SRM_RS06945 e83e16b08283e4b2f4ff3caa8228b123 707 PANTHER PTHR23115 528 700 2.1E-211 T 22-04-2016 SRM_RS06945 e83e16b08283e4b2f4ff3caa8228b123 707 PANTHER PTHR23115 1 174 2.1E-211 T 22-04-2016 SRM_RS06945 e83e16b08283e4b2f4ff3caa8228b123 707 Pfam PF00679 Elongation factor G C-terminus 609 695 3.2E-29 T 22-04-2016 IPR000640 Translation elongation factor EFG, V domain SRM_RS06945 e83e16b08283e4b2f4ff3caa8228b123 707 SUPERFAMILY SSF54980 392 469 2.01E-17 T 22-04-2016 IPR009022 Elongation factor G, III-V domain SRM_RS06945 e83e16b08283e4b2f4ff3caa8228b123 707 Gene3D G3DSA:3.30.230.10 472 607 6.2E-36 T 22-04-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup SRM_RS06945 e83e16b08283e4b2f4ff3caa8228b123 707 SMART SM00838 609 696 6.5E-39 T 22-04-2016 IPR000640 Translation elongation factor EFG, V domain SRM_RS06945 e83e16b08283e4b2f4ff3caa8228b123 707 Pfam PF14492 Elongation Factor G, domain II 392 464 1.1E-18 T 22-04-2016 IPR009022 Elongation factor G, III-V domain SRM_RS06945 e83e16b08283e4b2f4ff3caa8228b123 707 Pfam PF03144 Elongation factor Tu domain 2 312 378 7.3E-9 T 22-04-2016 IPR004161 Translation elongation factor EFTu/EF1A, domain 2 GO:0005525 SRM_RS06945 e83e16b08283e4b2f4ff3caa8228b123 707 PANTHER PTHR23115:SF98 249 508 2.1E-211 T 22-04-2016 SRM_RS06945 e83e16b08283e4b2f4ff3caa8228b123 707 PANTHER PTHR23115:SF98 528 700 2.1E-211 T 22-04-2016 SRM_RS06945 e83e16b08283e4b2f4ff3caa8228b123 707 PANTHER PTHR23115:SF98 1 174 2.1E-211 T 22-04-2016 SRM_RS06945 e83e16b08283e4b2f4ff3caa8228b123 707 SUPERFAMILY SSF50447 260 392 4.35E-23 T 22-04-2016 IPR009000 Translation protein, beta-barrel domain SRM_RS06945 e83e16b08283e4b2f4ff3caa8228b123 707 Gene3D G3DSA:2.40.30.10 294 392 1.0E-24 T 22-04-2016 SRM_RS06945 e83e16b08283e4b2f4ff3caa8228b123 707 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 8 148 2.8E-21 T 22-04-2016 IPR005225 Small GTP-binding protein domain GO:0005525 SRM_RS06945 e83e16b08283e4b2f4ff3caa8228b123 707 SUPERFAMILY SSF52540 5 276 1.46E-76 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SRM_RS06495 8cdea4b13998193a17afcfd6a15e3864 97 PIRSF PIRSF002144 1 95 9.7E-34 T 22-04-2016 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 SRM_RS06495 8cdea4b13998193a17afcfd6a15e3864 97 PRINTS PR00975 Ribosomal protein S19 family signature 65 80 2.1E-23 T 22-04-2016 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 SRM_RS06495 8cdea4b13998193a17afcfd6a15e3864 97 PRINTS PR00975 Ribosomal protein S19 family signature 33 52 2.1E-23 T 22-04-2016 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 SRM_RS06495 8cdea4b13998193a17afcfd6a15e3864 97 PRINTS PR00975 Ribosomal protein S19 family signature 53 65 2.1E-23 T 22-04-2016 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 SRM_RS06495 8cdea4b13998193a17afcfd6a15e3864 97 PANTHER PTHR11880 1 88 8.5E-48 T 22-04-2016 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 SRM_RS06495 8cdea4b13998193a17afcfd6a15e3864 97 TIGRFAM TIGR01050 rpsS_bact: ribosomal protein uS19 1 87 6.1E-42 T 22-04-2016 IPR005732 Ribosomal protein S19, bacterial-type GO:0003735|GO:0006412|GO:0015935 SRM_RS06495 8cdea4b13998193a17afcfd6a15e3864 97 Gene3D G3DSA:3.30.860.10 1 90 1.7E-39 T 22-04-2016 IPR023575 Ribosomal protein S19, superfamily GO:0003735|GO:0005840|GO:0006412 SRM_RS06495 8cdea4b13998193a17afcfd6a15e3864 97 SUPERFAMILY SSF54570 3 84 3.79E-35 T 22-04-2016 IPR023575 Ribosomal protein S19, superfamily GO:0003735|GO:0005840|GO:0006412 SRM_RS06495 8cdea4b13998193a17afcfd6a15e3864 97 ProSitePatterns PS00323 Ribosomal protein S19 signature. 53 77 - T 22-04-2016 IPR020934 Ribosomal protein S19 conserved site GO:0003723 SRM_RS06495 8cdea4b13998193a17afcfd6a15e3864 97 Pfam PF00203 Ribosomal protein S19 3 83 1.1E-36 T 22-04-2016 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 SRM_RS06495 8cdea4b13998193a17afcfd6a15e3864 97 Hamap MF_00531 30S ribosomal protein S19 [rpsS]. 1 89 25.275 T 22-04-2016 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 SRM_RS01515 bfabec5c42eca4a5ace9516a1526f62d 530 Gene3D G3DSA:3.30.450.20 54 157 7.9E-22 T 22-04-2016 SRM_RS01515 bfabec5c42eca4a5ace9516a1526f62d 530 SUPERFAMILY SSF58104 186 499 6.28E-76 T 22-04-2016 SRM_RS01515 bfabec5c42eca4a5ace9516a1526f62d 530 Pfam PF08447 PAS fold 68 152 6.1E-12 T 22-04-2016 IPR013655 PAS fold-3 GO:0005515 SRM_RS01515 bfabec5c42eca4a5ace9516a1526f62d 530 SMART SM00086 116 158 2.3E-4 T 22-04-2016 IPR001610 PAC motif SRM_RS01515 bfabec5c42eca4a5ace9516a1526f62d 530 SUPERFAMILY SSF55785 52 155 8.9E-23 T 22-04-2016 IPR000014 PAS domain SRM_RS01515 bfabec5c42eca4a5ace9516a1526f62d 530 SMART SM00283 233 498 6.2E-74 T 22-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 SRM_RS01515 bfabec5c42eca4a5ace9516a1526f62d 530 PANTHER PTHR32089 175 501 3.7E-105 T 22-04-2016 SRM_RS01515 bfabec5c42eca4a5ace9516a1526f62d 530 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 331 358 2.4E-11 T 22-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 SRM_RS01515 bfabec5c42eca4a5ace9516a1526f62d 530 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 254 283 2.4E-11 T 22-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 SRM_RS01515 bfabec5c42eca4a5ace9516a1526f62d 530 SMART SM00304 166 218 2.2E-7 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 SRM_RS01515 bfabec5c42eca4a5ace9516a1526f62d 530 Gene3D G3DSA:1.10.287.950 256 468 3.7E-54 T 22-04-2016 SRM_RS01515 bfabec5c42eca4a5ace9516a1526f62d 530 Gene3D G3DSA:1.10.287.950 206 255 5.1E-4 T 22-04-2016 SRM_RS01515 bfabec5c42eca4a5ace9516a1526f62d 530 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 55 164 9.0E-15 T 22-04-2016 IPR000014 PAS domain SRM_RS01515 bfabec5c42eca4a5ace9516a1526f62d 530 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 296 497 2.5E-48 T 22-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 SRM_RS10910 7c74c14fa2845554676bd27e98697f46 301 PANTHER PTHR31902:SF6 5 235 7.6E-16 T 22-04-2016 SRM_RS10910 7c74c14fa2845554676bd27e98697f46 301 SUPERFAMILY SSF52833 127 201 3.13E-9 T 22-04-2016 IPR012336 Thioredoxin-like fold SRM_RS10910 7c74c14fa2845554676bd27e98697f46 301 Gene3D G3DSA:3.40.30.10 127 200 1.7E-9 T 22-04-2016 IPR012336 Thioredoxin-like fold SRM_RS10910 7c74c14fa2845554676bd27e98697f46 301 Pfam PF06999 Sucrase/ferredoxin-like 120 198 9.7E-14 T 22-04-2016 IPR009737 Thioredoxin-like ferredoxin SRM_RS10910 7c74c14fa2845554676bd27e98697f46 301 PANTHER PTHR31902 5 235 7.6E-16 T 22-04-2016 SRM_RS12960 b7a6da8c94e58b2c7d176e9e5591237e 336 Pfam PF00107 Zinc-binding dehydrogenase 174 296 2.0E-20 T 22-04-2016 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 SRM_RS12960 b7a6da8c94e58b2c7d176e9e5591237e 336 SMART SM00829 10 332 1.6E-7 T 22-04-2016 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 SRM_RS12960 b7a6da8c94e58b2c7d176e9e5591237e 336 Gene3D G3DSA:3.40.50.720 168 281 5.3E-24 T 22-04-2016 IPR016040 NAD(P)-binding domain SRM_RS12960 b7a6da8c94e58b2c7d176e9e5591237e 336 Gene3D G3DSA:3.90.180.10 1 167 1.3E-62 T 22-04-2016 IPR011032 GroES-like SRM_RS12960 b7a6da8c94e58b2c7d176e9e5591237e 336 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 26 132 7.6E-30 T 22-04-2016 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 SRM_RS12960 b7a6da8c94e58b2c7d176e9e5591237e 336 SUPERFAMILY SSF51735 139 299 1.79E-37 T 22-04-2016 IPR016040 NAD(P)-binding domain SRM_RS12960 b7a6da8c94e58b2c7d176e9e5591237e 336 PANTHER PTHR11695:SF498 13 336 7.9E-139 T 22-04-2016 SRM_RS12960 b7a6da8c94e58b2c7d176e9e5591237e 336 ProSitePatterns PS00059 Zinc-containing alcohol dehydrogenases signature. 59 73 - T 22-04-2016 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site GO:0008270|GO:0016491|GO:0055114 SRM_RS12960 b7a6da8c94e58b2c7d176e9e5591237e 336 PANTHER PTHR11695 13 336 7.9E-139 T 22-04-2016 IPR002085 Alcohol dehydrogenase superfamily, zinc-type GO:0008270|GO:0016491|GO:0055114 SRM_RS12960 b7a6da8c94e58b2c7d176e9e5591237e 336 SUPERFAMILY SSF50129 1 169 2.28E-53 T 22-04-2016 IPR011032 GroES-like SRM_RS13555 0eeeece3f886be30033ed94dd62807ce 123 Pfam PF01627 Hpt domain 25 106 1.2E-13 T 22-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 SRM_RS13555 0eeeece3f886be30033ed94dd62807ce 123 Gene3D G3DSA:1.20.120.160 3 111 5.6E-28 T 22-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 SRM_RS13555 0eeeece3f886be30033ed94dd62807ce 123 SMART SM00073 15 112 6.6E-6 T 22-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 SRM_RS13555 0eeeece3f886be30033ed94dd62807ce 123 SUPERFAMILY SSF47226 3 111 4.71E-26 T 22-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 SRM_RS07010 fe2a1f2772e1958d329f642a62bc1619 455 Gene3D G3DSA:3.90.1170.30 346 429 1.8E-24 T 22-04-2016 IPR013102 Pyrimidine nucleoside phosphorylase, C-terminal GO:0006213|GO:0016763 SRM_RS07010 fe2a1f2772e1958d329f642a62bc1619 455 SUPERFAMILY SSF47648 5 72 1.23E-18 T 22-04-2016 IPR017459 Glycosyl transferase family 3, N-terminal domain SRM_RS07010 fe2a1f2772e1958d329f642a62bc1619 455 Pfam PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain 351 424 4.1E-20 T 22-04-2016 IPR013102 Pyrimidine nucleoside phosphorylase, C-terminal GO:0006213|GO:0016763 SRM_RS07010 fe2a1f2772e1958d329f642a62bc1619 455 PIRSF PIRSF000478 3 439 2.4E-152 T 22-04-2016 IPR000053 Thymidine/pyrimidine-nucleoside phosphorylase GO:0004645|GO:0006206 SRM_RS07010 fe2a1f2772e1958d329f642a62bc1619 455 TIGRFAM TIGR02644 Y_phosphoryl: pyrimidine-nucleoside phosphorylase 8 423 2.2E-158 T 22-04-2016 IPR018090 Pyrimidine-nucleoside phosphorylase, bacterial/eukaryotic GO:0006213|GO:0016154 KEGG: 00240+2.4.2.4|KEGG: 00983+2.4.2.4|MetaCyc: PWY-7181|UniPathway: UPA00578 SRM_RS07010 fe2a1f2772e1958d329f642a62bc1619 455 Pfam PF02885 Glycosyl transferase family, helical bundle domain 8 69 4.0E-20 T 22-04-2016 IPR017459 Glycosyl transferase family 3, N-terminal domain SRM_RS07010 fe2a1f2772e1958d329f642a62bc1619 455 PANTHER PTHR10515:SF0 7 443 1.2E-182 T 22-04-2016 SRM_RS07010 fe2a1f2772e1958d329f642a62bc1619 455 SUPERFAMILY SSF52418 72 331 1.7E-89 T 22-04-2016 IPR000312 Glycosyl transferase, family 3 GO:0008152|GO:0016757 SRM_RS07010 fe2a1f2772e1958d329f642a62bc1619 455 PANTHER PTHR10515 7 443 1.2E-182 T 22-04-2016 IPR000053 Thymidine/pyrimidine-nucleoside phosphorylase GO:0004645|GO:0006206 SRM_RS07010 fe2a1f2772e1958d329f642a62bc1619 455 Gene3D G3DSA:1.20.970.10 6 69 3.7E-26 T 22-04-2016 SRM_RS07010 fe2a1f2772e1958d329f642a62bc1619 455 ProSitePatterns PS00647 Thymidine and pyrimidine-nucleoside phosphorylases signature. 113 128 - T 22-04-2016 IPR017872 Pyrimidine-nucleoside phosphorylase, conserved site GO:0006206 SRM_RS07010 fe2a1f2772e1958d329f642a62bc1619 455 SMART SM00941 351 425 6.5E-31 T 22-04-2016 IPR013102 Pyrimidine nucleoside phosphorylase, C-terminal GO:0006213|GO:0016763 SRM_RS07010 fe2a1f2772e1958d329f642a62bc1619 455 Pfam PF00591 Glycosyl transferase family, a/b domain 81 310 7.6E-40 T 22-04-2016 IPR000312 Glycosyl transferase, family 3 GO:0008152|GO:0016757 SRM_RS07010 fe2a1f2772e1958d329f642a62bc1619 455 Gene3D G3DSA:3.40.1030.10 73 332 7.5E-108 T 22-04-2016 IPR000312 Glycosyl transferase, family 3 GO:0008152|GO:0016757 SRM_RS07010 fe2a1f2772e1958d329f642a62bc1619 455 SUPERFAMILY SSF54680 345 435 1.96E-22 T 22-04-2016 IPR013102 Pyrimidine nucleoside phosphorylase, C-terminal GO:0006213|GO:0016763 SRM_RS13105 a0b1c4a079c5822ed6e4520f6783d6d2 125 PANTHER PTHR38471:SF1 3 125 6.0E-22 T 22-04-2016 SRM_RS13105 a0b1c4a079c5822ed6e4520f6783d6d2 125 PANTHER PTHR38471 3 125 6.0E-22 T 22-04-2016 SRM_RS13105 a0b1c4a079c5822ed6e4520f6783d6d2 125 TIGRFAM TIGR02436 TIGR02436: four helix bundle protein 13 118 2.6E-27 T 22-04-2016 IPR012657 23S rRNA-intervening sequence protein SRM_RS13105 a0b1c4a079c5822ed6e4520f6783d6d2 125 PIRSF PIRSF035652 5 124 4.8E-33 T 22-04-2016 IPR012657 23S rRNA-intervening sequence protein SRM_RS13105 a0b1c4a079c5822ed6e4520f6783d6d2 125 Pfam PF05635 23S rRNA-intervening sequence protein 14 112 3.4E-19 T 22-04-2016 IPR012657 23S rRNA-intervening sequence protein SRM_RS13105 a0b1c4a079c5822ed6e4520f6783d6d2 125 SUPERFAMILY SSF158446 8 114 3.14E-27 T 22-04-2016 SRM_RS13105 a0b1c4a079c5822ed6e4520f6783d6d2 125 Gene3D G3DSA:1.20.1440.60 5 120 3.3E-32 T 22-04-2016 IPR012657 23S rRNA-intervening sequence protein SRM_RS08870 dd8f0d362c580b0e87ea89df42bbd103 406 Gene3D G3DSA:3.30.300.20 229 389 9.2E-49 T 22-04-2016 IPR015946 K homology domain-like, alpha/beta SRM_RS08870 dd8f0d362c580b0e87ea89df42bbd103 406 Pfam PF02566 OsmC-like protein 294 396 9.4E-16 T 22-04-2016 IPR003718 OsmC/Ohr family SRM_RS08870 dd8f0d362c580b0e87ea89df42bbd103 406 Pfam PF12146 Serine aminopeptidase, S33 49 131 4.3E-14 T 22-04-2016 IPR022742 Serine aminopeptidase, S33 SRM_RS08870 dd8f0d362c580b0e87ea89df42bbd103 406 SUPERFAMILY SSF82784 228 399 4.32E-41 T 22-04-2016 IPR003718 OsmC/Ohr family SRM_RS08870 dd8f0d362c580b0e87ea89df42bbd103 406 PANTHER PTHR11614:SF108 1 267 9.8E-86 T 22-04-2016 SRM_RS08870 dd8f0d362c580b0e87ea89df42bbd103 406 SUPERFAMILY SSF53474 182 250 2.95E-42 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold SRM_RS08870 dd8f0d362c580b0e87ea89df42bbd103 406 SUPERFAMILY SSF53474 2 138 2.95E-42 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold SRM_RS08870 dd8f0d362c580b0e87ea89df42bbd103 406 PANTHER PTHR11614 1 267 9.8E-86 T 22-04-2016 SRM_RS08870 dd8f0d362c580b0e87ea89df42bbd103 406 Gene3D G3DSA:3.40.50.1820 2 228 9.3E-36 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold SRM_RS08600 04a366be546ae93b60127bbcc535c22c 526 SUPERFAMILY SSF53067 251 493 1.85E-82 T 22-04-2016 SRM_RS08600 04a366be546ae93b60127bbcc535c22c 526 Gene3D G3DSA:3.30.420.40 251 493 2.3E-95 T 22-04-2016 SRM_RS08600 04a366be546ae93b60127bbcc535c22c 526 PANTHER PTHR10196:SF9 1 502 2.0E-250 T 22-04-2016 SRM_RS08600 04a366be546ae93b60127bbcc535c22c 526 Gene3D G3DSA:3.30.420.40 1 250 1.2E-103 T 22-04-2016 SRM_RS08600 04a366be546ae93b60127bbcc535c22c 526 ProSitePatterns PS00445 FGGY family of carbohydrate kinases signature 2. 359 379 - T 22-04-2016 IPR018483 Carbohydrate kinase, FGGY, conserved site GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261|UniPathway: UPA00618 SRM_RS08600 04a366be546ae93b60127bbcc535c22c 526 Pfam PF00370 FGGY family of carbohydrate kinases, N-terminal domain 3 249 1.1E-82 T 22-04-2016 IPR018484 Carbohydrate kinase, FGGY, N-terminal GO:0005975|GO:0016773 SRM_RS08600 04a366be546ae93b60127bbcc535c22c 526 SUPERFAMILY SSF53067 3 252 6.01E-96 T 22-04-2016 SRM_RS08600 04a366be546ae93b60127bbcc535c22c 526 Hamap MF_00186 Glycerol kinase [glpK]. 1 494 58.763 T 22-04-2016 IPR005999 Glycerol kinase GO:0004370|GO:0006072 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261|UniPathway: UPA00618 SRM_RS08600 04a366be546ae93b60127bbcc535c22c 526 Pfam PF02782 FGGY family of carbohydrate kinases, C-terminal domain 259 447 9.1E-61 T 22-04-2016 IPR018485 Carbohydrate kinase, FGGY, C-terminal GO:0005975|GO:0016773 SRM_RS08600 04a366be546ae93b60127bbcc535c22c 526 TIGRFAM TIGR01311 glycerol_kin: glycerol kinase 2 493 4.7E-222 T 22-04-2016 IPR005999 Glycerol kinase GO:0004370|GO:0006072 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261|UniPathway: UPA00618 SRM_RS08600 04a366be546ae93b60127bbcc535c22c 526 ProSitePatterns PS00933 FGGY family of carbohydrate kinases signature 1. 133 145 - T 22-04-2016 IPR018483 Carbohydrate kinase, FGGY, conserved site GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261|UniPathway: UPA00618 SRM_RS08600 04a366be546ae93b60127bbcc535c22c 526 PANTHER PTHR10196 1 502 2.0E-250 T 22-04-2016 SRM_RS08600 04a366be546ae93b60127bbcc535c22c 526 PIRSF PIRSF000538 1 499 6.2E-199 T 22-04-2016 IPR000577 Carbohydrate kinase, FGGY GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261|UniPathway: UPA00618 SRM_RS10780 ab263a452093287eb7357b5f29513c3e 371 TIGRFAM TIGR00374 TIGR00374: TIGR00374 family protein 43 358 4.5E-19 T 22-04-2016 IPR022791 Lysylphosphatidylglycerol synthetase/glycosyltransferase AglD SRM_RS10780 ab263a452093287eb7357b5f29513c3e 371 Pfam PF03706 Lysylphosphatidylglycerol synthase TM region 43 352 4.1E-45 T 22-04-2016 IPR022791 Lysylphosphatidylglycerol synthetase/glycosyltransferase AglD SRM_RS10780 ab263a452093287eb7357b5f29513c3e 371 PANTHER PTHR37693:SF1 35 357 1.8E-19 T 22-04-2016 SRM_RS10780 ab263a452093287eb7357b5f29513c3e 371 PANTHER PTHR37693 35 357 1.8E-19 T 22-04-2016 SRM_RS15585 bd9ae3896869950fd4cae2ecb62feeb9 1082 PANTHER PTHR32063 2 509 0.0 T 22-04-2016 SRM_RS15585 bd9ae3896869950fd4cae2ecb62feeb9 1082 PANTHER PTHR32063 529 1067 0.0 T 22-04-2016 SRM_RS15585 bd9ae3896869950fd4cae2ecb62feeb9 1082 Gene3D G3DSA:1.10.3850.10 841 1055 4.6E-55 T 22-04-2016 SRM_RS15585 bd9ae3896869950fd4cae2ecb62feeb9 1082 Gene3D G3DSA:1.10.3850.10 286 503 1.4E-59 T 22-04-2016 SRM_RS15585 bd9ae3896869950fd4cae2ecb62feeb9 1082 SUPERFAMILY SSF82714 751 834 1.05E-16 T 22-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains SRM_RS15585 bd9ae3896869950fd4cae2ecb62feeb9 1082 SUPERFAMILY SSF82693 43 127 1.46E-19 T 22-04-2016 SRM_RS15585 bd9ae3896869950fd4cae2ecb62feeb9 1082 Pfam PF00873 AcrB/AcrD/AcrF family 9 1053 1.8E-270 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 SRM_RS15585 bd9ae3896869950fd4cae2ecb62feeb9 1082 Gene3D G3DSA:3.30.2090.10 188 275 1.9E-15 T 22-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains SRM_RS15585 bd9ae3896869950fd4cae2ecb62feeb9 1082 Gene3D G3DSA:3.30.2090.10 751 834 1.8E-18 T 22-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains SRM_RS15585 bd9ae3896869950fd4cae2ecb62feeb9 1082 SUPERFAMILY SSF82866 301 502 2.09E-43 T 22-04-2016 SRM_RS15585 bd9ae3896869950fd4cae2ecb62feeb9 1082 SUPERFAMILY SSF82693 594 692 3.14E-9 T 22-04-2016 SRM_RS15585 bd9ae3896869950fd4cae2ecb62feeb9 1082 SUPERFAMILY SSF82693 151 187 2.54E-18 T 22-04-2016 SRM_RS15585 bd9ae3896869950fd4cae2ecb62feeb9 1082 SUPERFAMILY SSF82693 278 334 2.54E-18 T 22-04-2016 SRM_RS15585 bd9ae3896869950fd4cae2ecb62feeb9 1082 SUPERFAMILY SSF82866 833 1056 4.97E-54 T 22-04-2016 SRM_RS15585 bd9ae3896869950fd4cae2ecb62feeb9 1082 Gene3D G3DSA:3.30.70.1430 595 692 1.5E-7 T 22-04-2016 SRM_RS15585 bd9ae3896869950fd4cae2ecb62feeb9 1082 SUPERFAMILY SSF82714 188 275 4.58E-13 T 22-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains SRM_RS15585 bd9ae3896869950fd4cae2ecb62feeb9 1082 Gene3D G3DSA:3.30.70.1430 43 142 4.9E-23 T 22-04-2016 SRM_RS15585 bd9ae3896869950fd4cae2ecb62feeb9 1082 PANTHER PTHR32063:SF24 2 509 0.0 T 22-04-2016 SRM_RS15585 bd9ae3896869950fd4cae2ecb62feeb9 1082 PANTHER PTHR32063:SF24 529 1067 0.0 T 22-04-2016 SRM_RS15585 bd9ae3896869950fd4cae2ecb62feeb9 1082 PRINTS PR00702 Acriflavin resistance protein family signature 476 499 2.4E-32 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 SRM_RS15585 bd9ae3896869950fd4cae2ecb62feeb9 1082 PRINTS PR00702 Acriflavin resistance protein family signature 40 58 2.4E-32 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 SRM_RS15585 bd9ae3896869950fd4cae2ecb62feeb9 1082 PRINTS PR00702 Acriflavin resistance protein family signature 451 474 2.4E-32 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 SRM_RS15585 bd9ae3896869950fd4cae2ecb62feeb9 1082 PRINTS PR00702 Acriflavin resistance protein family signature 341 364 2.4E-32 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 SRM_RS15585 bd9ae3896869950fd4cae2ecb62feeb9 1082 PRINTS PR00702 Acriflavin resistance protein family signature 368 389 2.4E-32 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 SRM_RS15585 bd9ae3896869950fd4cae2ecb62feeb9 1082 PRINTS PR00702 Acriflavin resistance protein family signature 396 420 2.4E-32 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 SRM_RS15585 bd9ae3896869950fd4cae2ecb62feeb9 1082 PRINTS PR00702 Acriflavin resistance protein family signature 12 36 2.4E-32 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 SRM_RS13170 00c7e8517b8c7269c958aa09d0333f12 388 SUPERFAMILY SSF46565 3 109 1.1E-35 T 22-04-2016 IPR001623 DnaJ domain SRM_RS13170 00c7e8517b8c7269c958aa09d0333f12 388 Pfam PF00684 DnaJ central domain 153 220 2.9E-11 T 22-04-2016 IPR001305 Heat shock protein DnaJ, cysteine-rich domain GO:0031072|GO:0051082 SRM_RS13170 00c7e8517b8c7269c958aa09d0333f12 388 SUPERFAMILY SSF57938 140 223 2.75E-15 T 22-04-2016 IPR001305 Heat shock protein DnaJ, cysteine-rich domain GO:0031072|GO:0051082 SRM_RS13170 00c7e8517b8c7269c958aa09d0333f12 388 Gene3D G3DSA:2.60.260.20 269 347 8.9E-19 T 22-04-2016 SRM_RS13170 00c7e8517b8c7269c958aa09d0333f12 388 PANTHER PTHR24078:SF190 3 360 5.5E-138 T 22-04-2016 SRM_RS13170 00c7e8517b8c7269c958aa09d0333f12 388 TIGRFAM TIGR02349 DnaJ_bact: chaperone protein DnaJ 4 362 3.7E-126 T 22-04-2016 IPR012724 Chaperone DnaJ GO:0005524|GO:0006457|GO:0009408|GO:0051082 SRM_RS13170 00c7e8517b8c7269c958aa09d0333f12 388 Gene3D G3DSA:2.10.230.10 147 222 5.4E-17 T 22-04-2016 IPR001305 Heat shock protein DnaJ, cysteine-rich domain GO:0031072|GO:0051082 SRM_RS13170 00c7e8517b8c7269c958aa09d0333f12 388 PRINTS PR00625 DnaJ domain signature 61 80 9.8E-34 T 22-04-2016 IPR001623 DnaJ domain SRM_RS13170 00c7e8517b8c7269c958aa09d0333f12 388 PRINTS PR00625 DnaJ domain signature 24 39 9.8E-34 T 22-04-2016 IPR001623 DnaJ domain SRM_RS13170 00c7e8517b8c7269c958aa09d0333f12 388 PRINTS PR00625 DnaJ domain signature 6 24 9.8E-34 T 22-04-2016 IPR001623 DnaJ domain SRM_RS13170 00c7e8517b8c7269c958aa09d0333f12 388 PRINTS PR00625 DnaJ domain signature 41 61 9.8E-34 T 22-04-2016 IPR001623 DnaJ domain SRM_RS13170 00c7e8517b8c7269c958aa09d0333f12 388 SUPERFAMILY SSF49493 271 357 4.97E-19 T 22-04-2016 IPR008971 HSP40/DnaJ peptide-binding GO:0006457|GO:0051082 SRM_RS13170 00c7e8517b8c7269c958aa09d0333f12 388 SUPERFAMILY SSF49493 121 161 7.46E-13 T 22-04-2016 IPR008971 HSP40/DnaJ peptide-binding GO:0006457|GO:0051082 SRM_RS13170 00c7e8517b8c7269c958aa09d0333f12 388 SUPERFAMILY SSF49493 227 270 7.46E-13 T 22-04-2016 IPR008971 HSP40/DnaJ peptide-binding GO:0006457|GO:0051082 SRM_RS13170 00c7e8517b8c7269c958aa09d0333f12 388 Gene3D G3DSA:1.10.287.110 3 100 2.8E-37 T 22-04-2016 IPR001623 DnaJ domain SRM_RS13170 00c7e8517b8c7269c958aa09d0333f12 388 Gene3D G3DSA:2.60.260.20 223 267 9.7E-14 T 22-04-2016 SRM_RS13170 00c7e8517b8c7269c958aa09d0333f12 388 Gene3D G3DSA:2.60.260.20 118 146 9.7E-14 T 22-04-2016 SRM_RS13170 00c7e8517b8c7269c958aa09d0333f12 388 ProSitePatterns PS00636 Nt-dnaJ domain signature. 46 65 - T 22-04-2016 IPR018253 DnaJ domain, conserved site SRM_RS13170 00c7e8517b8c7269c958aa09d0333f12 388 SMART SM00271 3 61 1.0E-33 T 22-04-2016 IPR001623 DnaJ domain SRM_RS13170 00c7e8517b8c7269c958aa09d0333f12 388 Pfam PF01556 DnaJ C terminal domain 127 346 8.6E-36 T 22-04-2016 IPR002939 Chaperone DnaJ, C-terminal SRM_RS13170 00c7e8517b8c7269c958aa09d0333f12 388 Hamap MF_01152 Chaperone protein DnaJ [dnaJ]. 1 386 38.014 T 22-04-2016 IPR012724 Chaperone DnaJ GO:0005524|GO:0006457|GO:0009408|GO:0051082 SRM_RS13170 00c7e8517b8c7269c958aa09d0333f12 388 PANTHER PTHR24078 3 360 5.5E-138 T 22-04-2016 SRM_RS13170 00c7e8517b8c7269c958aa09d0333f12 388 Pfam PF00226 DnaJ domain 4 66 2.7E-29 T 22-04-2016 IPR001623 DnaJ domain SRM_RS15565 75dca609423f2d5aafcd8117ae2bc920 279 SUPERFAMILY SSF56925 138 249 4.45E-11 T 22-04-2016 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 SRM_RS15565 75dca609423f2d5aafcd8117ae2bc920 279 Gene3D G3DSA:2.40.160.20 125 249 1.5E-14 T 22-04-2016 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 SRM_RS15565 75dca609423f2d5aafcd8117ae2bc920 279 Pfam PF13505 Outer membrane protein beta-barrel domain 118 251 1.1E-12 T 22-04-2016 IPR027385 Outer membrane protein beta-barrel SRM_RS13675 d8f859b8f26252bd8a4de3493de43623 248 PANTHER PTHR24322 170 202 6.8E-52 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SRM_RS13675 d8f859b8f26252bd8a4de3493de43623 248 PANTHER PTHR24322 11 151 6.8E-52 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SRM_RS13675 d8f859b8f26252bd8a4de3493de43623 248 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 170 189 7.8E-15 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SRM_RS13675 d8f859b8f26252bd8a4de3493de43623 248 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 8 25 7.8E-15 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SRM_RS13675 d8f859b8f26252bd8a4de3493de43623 248 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 191 208 7.8E-15 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SRM_RS13675 d8f859b8f26252bd8a4de3493de43623 248 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 82 93 7.8E-15 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SRM_RS13675 d8f859b8f26252bd8a4de3493de43623 248 Gene3D G3DSA:3.40.50.720 5 248 2.7E-70 T 22-04-2016 IPR016040 NAD(P)-binding domain SRM_RS13675 d8f859b8f26252bd8a4de3493de43623 248 Pfam PF00106 short chain dehydrogenase 10 209 1.0E-33 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SRM_RS13675 d8f859b8f26252bd8a4de3493de43623 248 SUPERFAMILY SSF51735 8 248 1.21E-73 T 22-04-2016 IPR016040 NAD(P)-binding domain SRM_RS13675 d8f859b8f26252bd8a4de3493de43623 248 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 157 165 4.3E-5 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SRM_RS13675 d8f859b8f26252bd8a4de3493de43623 248 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 82 93 4.3E-5 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SRM_RS13675 d8f859b8f26252bd8a4de3493de43623 248 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 170 189 4.3E-5 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SRM_RS13675 d8f859b8f26252bd8a4de3493de43623 248 PANTHER PTHR24322:SF430 170 202 6.8E-52 T 22-04-2016 SRM_RS13675 d8f859b8f26252bd8a4de3493de43623 248 PANTHER PTHR24322:SF430 11 151 6.8E-52 T 22-04-2016 SRM_RS13530 ea43893b3bcda6564efc2b7d7acb0e1e 514 PANTHER PTHR10572 143 512 2.8E-93 T 22-04-2016 IPR002202 Hydroxymethylglutaryl-CoA reductase, class I/II GO:0004420|GO:0015936|GO:0050662|GO:0055114 KEGG: 00900+1.1.1.34|MetaCyc: PWY-6174|MetaCyc: PWY-7391|MetaCyc: PWY-7524|MetaCyc: PWY-922|UniPathway: UPA00058 SRM_RS13530 ea43893b3bcda6564efc2b7d7acb0e1e 514 PRINTS PR00071 Hydroxymethylglutaryl-coenzyme A reductase signature 384 410 4.3E-38 T 22-04-2016 IPR002202 Hydroxymethylglutaryl-CoA reductase, class I/II GO:0004420|GO:0015936|GO:0050662|GO:0055114 KEGG: 00900+1.1.1.34|MetaCyc: PWY-6174|MetaCyc: PWY-7391|MetaCyc: PWY-7524|MetaCyc: PWY-922|UniPathway: UPA00058 SRM_RS13530 ea43893b3bcda6564efc2b7d7acb0e1e 514 PRINTS PR00071 Hydroxymethylglutaryl-coenzyme A reductase signature 205 225 4.3E-38 T 22-04-2016 IPR002202 Hydroxymethylglutaryl-CoA reductase, class I/II GO:0004420|GO:0015936|GO:0050662|GO:0055114 KEGG: 00900+1.1.1.34|MetaCyc: PWY-6174|MetaCyc: PWY-7391|MetaCyc: PWY-7524|MetaCyc: PWY-922|UniPathway: UPA00058 SRM_RS13530 ea43893b3bcda6564efc2b7d7acb0e1e 514 PRINTS PR00071 Hydroxymethylglutaryl-coenzyme A reductase signature 174 195 4.3E-38 T 22-04-2016 IPR002202 Hydroxymethylglutaryl-CoA reductase, class I/II GO:0004420|GO:0015936|GO:0050662|GO:0055114 KEGG: 00900+1.1.1.34|MetaCyc: PWY-6174|MetaCyc: PWY-7391|MetaCyc: PWY-7524|MetaCyc: PWY-922|UniPathway: UPA00058 SRM_RS13530 ea43893b3bcda6564efc2b7d7acb0e1e 514 PRINTS PR00071 Hydroxymethylglutaryl-coenzyme A reductase signature 335 360 4.3E-38 T 22-04-2016 IPR002202 Hydroxymethylglutaryl-CoA reductase, class I/II GO:0004420|GO:0015936|GO:0050662|GO:0055114 KEGG: 00900+1.1.1.34|MetaCyc: PWY-6174|MetaCyc: PWY-7391|MetaCyc: PWY-7524|MetaCyc: PWY-922|UniPathway: UPA00058 SRM_RS13530 ea43893b3bcda6564efc2b7d7acb0e1e 514 PRINTS PR00071 Hydroxymethylglutaryl-coenzyme A reductase signature 294 312 4.3E-38 T 22-04-2016 IPR002202 Hydroxymethylglutaryl-CoA reductase, class I/II GO:0004420|GO:0015936|GO:0050662|GO:0055114 KEGG: 00900+1.1.1.34|MetaCyc: PWY-6174|MetaCyc: PWY-7391|MetaCyc: PWY-7524|MetaCyc: PWY-922|UniPathway: UPA00058 SRM_RS13530 ea43893b3bcda6564efc2b7d7acb0e1e 514 PRINTS PR00071 Hydroxymethylglutaryl-coenzyme A reductase signature 437 458 4.3E-38 T 22-04-2016 IPR002202 Hydroxymethylglutaryl-CoA reductase, class I/II GO:0004420|GO:0015936|GO:0050662|GO:0055114 KEGG: 00900+1.1.1.34|MetaCyc: PWY-6174|MetaCyc: PWY-7391|MetaCyc: PWY-7524|MetaCyc: PWY-922|UniPathway: UPA00058 SRM_RS13530 ea43893b3bcda6564efc2b7d7acb0e1e 514 Gene3D G3DSA:3.30.70.420 245 354 1.0E-35 T 22-04-2016 IPR009023 Hydroxymethylglutaryl-CoA reductase, class I/II, NAD/NADP-binding domain GO:0050662 KEGG: 00900+1.1.1.34|MetaCyc: PWY-6174|MetaCyc: PWY-7391|MetaCyc: PWY-7524|MetaCyc: PWY-922|UniPathway: UPA00058 SRM_RS13530 ea43893b3bcda6564efc2b7d7acb0e1e 514 Gene3D G3DSA:3.90.770.10 139 244 4.3E-63 T 22-04-2016 IPR023074 Hydroxymethylglutaryl-CoA reductase, class I/II, catalytic domain GO:0004420|GO:0055114 KEGG: 00900+1.1.1.34|MetaCyc: PWY-6174|MetaCyc: PWY-7391|MetaCyc: PWY-7524|MetaCyc: PWY-922|UniPathway: UPA00058 SRM_RS13530 ea43893b3bcda6564efc2b7d7acb0e1e 514 Gene3D G3DSA:3.90.770.10 357 500 4.3E-63 T 22-04-2016 IPR023074 Hydroxymethylglutaryl-CoA reductase, class I/II, catalytic domain GO:0004420|GO:0055114 KEGG: 00900+1.1.1.34|MetaCyc: PWY-6174|MetaCyc: PWY-7391|MetaCyc: PWY-7524|MetaCyc: PWY-922|UniPathway: UPA00058 SRM_RS13530 ea43893b3bcda6564efc2b7d7acb0e1e 514 SUPERFAMILY SSF55035 240 354 1.83E-38 T 22-04-2016 IPR009023 Hydroxymethylglutaryl-CoA reductase, class I/II, NAD/NADP-binding domain GO:0050662 KEGG: 00900+1.1.1.34|MetaCyc: PWY-6174|MetaCyc: PWY-7391|MetaCyc: PWY-7524|MetaCyc: PWY-922|UniPathway: UPA00058 SRM_RS13530 ea43893b3bcda6564efc2b7d7acb0e1e 514 Pfam PF00368 Hydroxymethylglutaryl-coenzyme A reductase 143 512 4.6E-116 T 22-04-2016 IPR002202 Hydroxymethylglutaryl-CoA reductase, class I/II GO:0004420|GO:0015936|GO:0050662|GO:0055114 KEGG: 00900+1.1.1.34|MetaCyc: PWY-6174|MetaCyc: PWY-7391|MetaCyc: PWY-7524|MetaCyc: PWY-922|UniPathway: UPA00058 SRM_RS13530 ea43893b3bcda6564efc2b7d7acb0e1e 514 SUPERFAMILY SSF56542 352 501 3.01E-65 T 22-04-2016 IPR009029 Hydroxymethylglutaryl-CoA reductase, class I/II, substrate-binding domain GO:0015936|GO:0016616|GO:0050662|GO:0055114 KEGG: 00900+1.1.1.34|MetaCyc: PWY-6174|MetaCyc: PWY-7391|MetaCyc: PWY-7524|MetaCyc: PWY-922|UniPathway: UPA00058 SRM_RS13530 ea43893b3bcda6564efc2b7d7acb0e1e 514 SUPERFAMILY SSF56542 139 236 3.01E-65 T 22-04-2016 IPR009029 Hydroxymethylglutaryl-CoA reductase, class I/II, substrate-binding domain GO:0015936|GO:0016616|GO:0050662|GO:0055114 KEGG: 00900+1.1.1.34|MetaCyc: PWY-6174|MetaCyc: PWY-7391|MetaCyc: PWY-7524|MetaCyc: PWY-922|UniPathway: UPA00058 SRM_RS00990 0c1940cc1d95df96ac1f72c489881144 486 SUPERFAMILY SSF49299 310 392 3.66E-12 T 22-04-2016 IPR000601 PKD domain SRM_RS00990 0c1940cc1d95df96ac1f72c489881144 486 Gene3D G3DSA:3.30.70.1070 402 474 3.2E-7 T 22-04-2016 IPR007730 Sporulation-related domain GO:0042834 SRM_RS00990 0c1940cc1d95df96ac1f72c489881144 486 SUPERFAMILY SSF49299 208 303 7.98E-20 T 22-04-2016 IPR000601 PKD domain SRM_RS00990 0c1940cc1d95df96ac1f72c489881144 486 SUPERFAMILY SSF56925 38 213 8.37E-8 T 22-04-2016 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 SRM_RS00990 0c1940cc1d95df96ac1f72c489881144 486 SMART SM00089 222 304 4.2E-16 T 22-04-2016 IPR022409 PKD/Chitinase domain SRM_RS00990 0c1940cc1d95df96ac1f72c489881144 486 SMART SM00089 318 393 5.3E-11 T 22-04-2016 IPR022409 PKD/Chitinase domain SRM_RS00990 0c1940cc1d95df96ac1f72c489881144 486 Pfam PF13505 Outer membrane protein beta-barrel domain 22 213 2.3E-8 T 22-04-2016 IPR027385 Outer membrane protein beta-barrel SRM_RS00990 0c1940cc1d95df96ac1f72c489881144 486 Pfam PF05036 Sporulation related domain 405 473 9.6E-8 T 22-04-2016 IPR007730 Sporulation-related domain GO:0042834 SRM_RS00990 0c1940cc1d95df96ac1f72c489881144 486 Pfam PF00801 PKD domain 320 383 3.7E-12 T 22-04-2016 IPR000601 PKD domain SRM_RS00990 0c1940cc1d95df96ac1f72c489881144 486 Pfam PF00801 PKD domain 230 295 5.9E-15 T 22-04-2016 IPR000601 PKD domain SRM_RS00990 0c1940cc1d95df96ac1f72c489881144 486 Gene3D G3DSA:2.60.40.670 228 302 1.8E-19 T 22-04-2016 IPR000601 PKD domain SRM_RS00990 0c1940cc1d95df96ac1f72c489881144 486 Gene3D G3DSA:2.60.40.670 319 391 1.8E-13 T 22-04-2016 IPR000601 PKD domain SRM_RS00990 0c1940cc1d95df96ac1f72c489881144 486 Gene3D G3DSA:2.40.160.20 24 221 4.8E-6 T 22-04-2016 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 SRM_RS00990 0c1940cc1d95df96ac1f72c489881144 486 SUPERFAMILY SSF110997 405 480 1.16E-7 T 22-04-2016 IPR007730 Sporulation-related domain GO:0042834 SRM_RS01165 bc483d8d78e8c50707596cf66ab26203 920 Gene3D G3DSA:3.20.20.70 10 364 1.4E-105 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 SRM_RS01165 bc483d8d78e8c50707596cf66ab26203 920 TIGRFAM TIGR00876 tal_mycobact: transaldolase 18 361 1.8E-101 T 22-04-2016 IPR004732 Transaldolase type 2 GO:0004801|GO:0005737|GO:0006098 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|UniPathway: UPA00115 SRM_RS01165 bc483d8d78e8c50707596cf66ab26203 920 PANTHER PTHR10683 6 390 2.0E-111 T 22-04-2016 IPR001585 Transaldolase/Fructose-6-phosphate aldolase GO:0005975 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|UniPathway: UPA00115 SRM_RS01165 bc483d8d78e8c50707596cf66ab26203 920 Pfam PF00923 Transaldolase 21 362 3.2E-86 T 22-04-2016 IPR001585 Transaldolase/Fructose-6-phosphate aldolase GO:0005975 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|UniPathway: UPA00115 SRM_RS01165 bc483d8d78e8c50707596cf66ab26203 920 ProSitePatterns PS00958 Transaldolase active site. 144 161 - T 22-04-2016 IPR018225 Transaldolase, active site GO:0005975 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|UniPathway: UPA00115 SRM_RS01165 bc483d8d78e8c50707596cf66ab26203 920 Hamap MF_00493 Transaldolase [tal]. 1 374 124.725 T 22-04-2016 IPR004732 Transaldolase type 2 GO:0004801|GO:0005737|GO:0006098 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|UniPathway: UPA00115 SRM_RS01165 bc483d8d78e8c50707596cf66ab26203 920 Pfam PF00342 Phosphoglucose isomerase 450 663 1.2E-13 T 22-04-2016 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|UniPathway: UPA00109 SRM_RS01165 bc483d8d78e8c50707596cf66ab26203 920 Gene3D G3DSA:3.40.50.10490 704 772 3.2E-9 T 22-04-2016 SRM_RS01165 bc483d8d78e8c50707596cf66ab26203 920 Gene3D G3DSA:3.40.50.10490 567 671 2.0E-28 T 22-04-2016 SRM_RS01165 bc483d8d78e8c50707596cf66ab26203 920 Gene3D G3DSA:3.40.50.10490 827 909 2.1E-13 T 22-04-2016 SRM_RS01165 bc483d8d78e8c50707596cf66ab26203 920 PANTHER PTHR10683:SF12 6 390 2.0E-111 T 22-04-2016 SRM_RS01165 bc483d8d78e8c50707596cf66ab26203 920 Gene3D G3DSA:3.40.50.10490 451 566 3.9E-23 T 22-04-2016 SRM_RS01165 bc483d8d78e8c50707596cf66ab26203 920 SUPERFAMILY SSF51569 16 367 1.59E-75 T 22-04-2016 SRM_RS01165 bc483d8d78e8c50707596cf66ab26203 920 PRINTS PR00662 Glucose-6-phosphate isomerase signature 456 475 3.6E-7 T 22-04-2016 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|UniPathway: UPA00109 SRM_RS01165 bc483d8d78e8c50707596cf66ab26203 920 PRINTS PR00662 Glucose-6-phosphate isomerase signature 566 584 3.6E-7 T 22-04-2016 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|UniPathway: UPA00109 SRM_RS01165 bc483d8d78e8c50707596cf66ab26203 920 PRINTS PR00662 Glucose-6-phosphate isomerase signature 641 662 3.6E-7 T 22-04-2016 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|UniPathway: UPA00109 SRM_RS01165 bc483d8d78e8c50707596cf66ab26203 920 SUPERFAMILY SSF53697 386 771 4.87E-83 T 22-04-2016 SRM_RS05585 0b0e5b31839fee05b0f8fc7c86ed068b 314 Gene3D G3DSA:3.40.50.1980 148 290 7.2E-20 T 22-04-2016 SRM_RS05585 0b0e5b31839fee05b0f8fc7c86ed068b 314 PANTHER PTHR30535:SF2 3 299 7.4E-71 T 22-04-2016 SRM_RS05585 0b0e5b31839fee05b0f8fc7c86ed068b 314 Gene3D G3DSA:3.40.50.1980 3 147 1.1E-27 T 22-04-2016 SRM_RS05585 0b0e5b31839fee05b0f8fc7c86ed068b 314 Pfam PF01497 Periplasmic binding protein 4 261 5.3E-25 T 22-04-2016 IPR002491 ABC transporter periplasmic binding domain GO:0005488 SRM_RS05585 0b0e5b31839fee05b0f8fc7c86ed068b 314 PANTHER PTHR30535 3 299 7.4E-71 T 22-04-2016 SRM_RS05585 0b0e5b31839fee05b0f8fc7c86ed068b 314 SUPERFAMILY SSF53807 3 287 1.1E-46 T 22-04-2016 SRM_RS01675 21f90e4184acc6d703b0e8ae82e12949 593 Gene3D G3DSA:3.30.450.20 208 352 8.4E-35 T 22-04-2016 SRM_RS01675 21f90e4184acc6d703b0e8ae82e12949 593 SUPERFAMILY SSF55785 120 219 6.12E-15 T 22-04-2016 IPR000014 PAS domain SRM_RS01675 21f90e4184acc6d703b0e8ae82e12949 593 PRINTS PR00344 Bacterial sensor protein C-terminal signature 541 559 8.8E-14 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SRM_RS01675 21f90e4184acc6d703b0e8ae82e12949 593 PRINTS PR00344 Bacterial sensor protein C-terminal signature 506 520 8.8E-14 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SRM_RS01675 21f90e4184acc6d703b0e8ae82e12949 593 PRINTS PR00344 Bacterial sensor protein C-terminal signature 565 578 8.8E-14 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SRM_RS01675 21f90e4184acc6d703b0e8ae82e12949 593 SMART SM00086 297 339 1.0E-8 T 22-04-2016 IPR001610 PAC motif SRM_RS01675 21f90e4184acc6d703b0e8ae82e12949 593 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 249 346 2.4E-8 T 22-04-2016 IPR000014 PAS domain SRM_RS01675 21f90e4184acc6d703b0e8ae82e12949 593 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 121 218 6.9E-10 T 22-04-2016 IPR000014 PAS domain SRM_RS01675 21f90e4184acc6d703b0e8ae82e12949 593 Pfam PF00512 His Kinase A (phospho-acceptor) domain 360 422 4.7E-15 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SRM_RS01675 21f90e4184acc6d703b0e8ae82e12949 593 SUPERFAMILY SSF47384 344 422 4.71E-18 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SRM_RS01675 21f90e4184acc6d703b0e8ae82e12949 593 Gene3D G3DSA:3.30.565.10 410 583 3.0E-42 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SRM_RS01675 21f90e4184acc6d703b0e8ae82e12949 593 PANTHER PTHR24423 82 579 8.0E-110 T 22-04-2016 SRM_RS01675 21f90e4184acc6d703b0e8ae82e12949 593 SUPERFAMILY SSF55874 413 579 3.41E-40 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SRM_RS01675 21f90e4184acc6d703b0e8ae82e12949 593 Gene3D G3DSA:3.30.450.20 87 207 3.1E-16 T 22-04-2016 SRM_RS01675 21f90e4184acc6d703b0e8ae82e12949 593 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 470 580 6.2E-26 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SRM_RS01675 21f90e4184acc6d703b0e8ae82e12949 593 SUPERFAMILY SSF55785 229 341 4.83E-23 T 22-04-2016 IPR000014 PAS domain SRM_RS01675 21f90e4184acc6d703b0e8ae82e12949 593 Gene3D G3DSA:1.10.287.130 353 409 1.5E-17 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SRM_RS01675 21f90e4184acc6d703b0e8ae82e12949 593 SMART SM00091 223 291 2.6E-6 T 22-04-2016 IPR000014 PAS domain SRM_RS01675 21f90e4184acc6d703b0e8ae82e12949 593 SMART SM00091 97 166 2.0E-5 T 22-04-2016 IPR000014 PAS domain SRM_RS01675 21f90e4184acc6d703b0e8ae82e12949 593 SMART SM00387 469 581 1.6E-36 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SRM_RS01675 21f90e4184acc6d703b0e8ae82e12949 593 SMART SM00388 359 423 1.8E-18 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SRM_RS01675 21f90e4184acc6d703b0e8ae82e12949 593 Pfam PF08448 PAS fold 117 213 3.5E-7 T 22-04-2016 IPR013656 PAS fold-4 SRM_RS01675 21f90e4184acc6d703b0e8ae82e12949 593 Pfam PF08447 PAS fold 246 333 3.2E-21 T 22-04-2016 IPR013655 PAS fold-3 GO:0005515 SRM_RS05855 5fd9838128560d6ac4f638f6b083f892 308 TIGRFAM TIGR01146 ATPsyn_F1gamma: ATP synthase F1, gamma subunit 1 304 1.9E-91 T 22-04-2016 IPR000131 ATPase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 SRM_RS05855 5fd9838128560d6ac4f638f6b083f892 308 Hamap MF_00815 ATP synthase gamma chain [atpG]. 1 304 33.165 T 22-04-2016 IPR000131 ATPase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 SRM_RS05855 5fd9838128560d6ac4f638f6b083f892 308 SUPERFAMILY SSF52943 2 304 1.96E-81 T 22-04-2016 IPR023633 ATPase, F1 complex, gamma subunit domain SRM_RS05855 5fd9838128560d6ac4f638f6b083f892 308 Pfam PF00231 ATP synthase 3 304 4.3E-88 T 22-04-2016 IPR000131 ATPase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 SRM_RS05855 5fd9838128560d6ac4f638f6b083f892 308 Gene3D G3DSA:1.10.287.80 253 299 5.3E-27 T 22-04-2016 SRM_RS05855 5fd9838128560d6ac4f638f6b083f892 308 ProSitePatterns PS00153 ATP synthase gamma subunit signature. 290 303 - T 22-04-2016 IPR023632 ATPase, F1 complex, gamma subunit conserved site SRM_RS05855 5fd9838128560d6ac4f638f6b083f892 308 Gene3D G3DSA:1.10.287.80 219 252 4.8E-29 T 22-04-2016 SRM_RS05855 5fd9838128560d6ac4f638f6b083f892 308 Gene3D G3DSA:1.10.287.80 19 60 4.8E-29 T 22-04-2016 SRM_RS05855 5fd9838128560d6ac4f638f6b083f892 308 Gene3D G3DSA:3.40.1380.10 65 195 1.1E-32 T 22-04-2016 SRM_RS05855 5fd9838128560d6ac4f638f6b083f892 308 PANTHER PTHR11693 1 306 1.3E-99 T 22-04-2016 IPR000131 ATPase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 SRM_RS05855 5fd9838128560d6ac4f638f6b083f892 308 PRINTS PR00126 ATP synthase gamma subunit signature 282 303 1.1E-30 T 22-04-2016 IPR000131 ATPase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 SRM_RS05855 5fd9838128560d6ac4f638f6b083f892 308 PRINTS PR00126 ATP synthase gamma subunit signature 251 270 1.1E-30 T 22-04-2016 IPR000131 ATPase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 SRM_RS05855 5fd9838128560d6ac4f638f6b083f892 308 PRINTS PR00126 ATP synthase gamma subunit signature 74 93 1.1E-30 T 22-04-2016 IPR000131 ATPase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 SRM_RS05855 5fd9838128560d6ac4f638f6b083f892 308 PRINTS PR00126 ATP synthase gamma subunit signature 170 187 1.1E-30 T 22-04-2016 IPR000131 ATPase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 SRM_RS10385 ede0fadfca23450162b792e51ebf2fe4 1073 SUPERFAMILY SSF52540 289 674 1.5E-15 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SRM_RS10385 ede0fadfca23450162b792e51ebf2fe4 1073 Pfam PF12705 PD-(D/E)XK nuclease superfamily 770 1030 3.1E-28 T 22-04-2016 SRM_RS10385 ede0fadfca23450162b792e51ebf2fe4 1073 SUPERFAMILY SSF52980 795 988 3.27E-6 T 22-04-2016 IPR011335 Restriction endonuclease type II-like SRM_RS03950 0bfb862ace2da57a15f464f02760a923 332 Gene3D G3DSA:3.40.50.720 4 188 2.1E-62 T 22-04-2016 IPR016040 NAD(P)-binding domain SRM_RS03950 0bfb862ace2da57a15f464f02760a923 332 Pfam PF16363 GDP-mannose 4,6 dehydratase 5 305 2.5E-75 T 22-04-2016 IPR016040 NAD(P)-binding domain SRM_RS03950 0bfb862ace2da57a15f464f02760a923 332 TIGRFAM TIGR04180 EDH_00030: NAD dependent epimerase/dehydratase, LLPSF_EDH_00030 family 4 299 1.2E-160 T 22-04-2016 IPR026390 NAD dependent epimerase/dehydratase, LLPSF_EDH_00030 family SRM_RS03950 0bfb862ace2da57a15f464f02760a923 332 SUPERFAMILY SSF51735 4 320 4.57E-92 T 22-04-2016 IPR016040 NAD(P)-binding domain SRM_RS03950 0bfb862ace2da57a15f464f02760a923 332 PRINTS PR01713 Nucleotide sugar epimerase signature 235 250 1.3E-7 T 22-04-2016 IPR008089 Nucleotide sugar epimerase GO:0005975|GO:0016857 SRM_RS03950 0bfb862ace2da57a15f464f02760a923 332 PRINTS PR01713 Nucleotide sugar epimerase signature 212 227 1.3E-7 T 22-04-2016 IPR008089 Nucleotide sugar epimerase GO:0005975|GO:0016857 SRM_RS03950 0bfb862ace2da57a15f464f02760a923 332 PRINTS PR01713 Nucleotide sugar epimerase signature 278 295 1.3E-7 T 22-04-2016 IPR008089 Nucleotide sugar epimerase GO:0005975|GO:0016857 SRM_RS03950 0bfb862ace2da57a15f464f02760a923 332 Gene3D G3DSA:3.90.25.10 189 321 3.0E-34 T 22-04-2016 SRM_RS03950 0bfb862ace2da57a15f464f02760a923 332 PANTHER PTHR10366:SF253 3 323 4.9E-153 T 22-04-2016 SRM_RS03950 0bfb862ace2da57a15f464f02760a923 332 PANTHER PTHR10366 3 323 4.9E-153 T 22-04-2016 SRM_RS07740 edb79b2f5a670e403bacd13398740ea0 262 Pfam PF01026 TatD related DNase 3 256 9.4E-73 T 22-04-2016 IPR001130 TatD family GO:0016788 SRM_RS07740 edb79b2f5a670e403bacd13398740ea0 262 PANTHER PTHR10060:SF20 1 260 6.7E-100 T 22-04-2016 SRM_RS07740 edb79b2f5a670e403bacd13398740ea0 262 PANTHER PTHR10060 1 260 6.7E-100 T 22-04-2016 IPR001130 TatD family GO:0016788 SRM_RS07740 edb79b2f5a670e403bacd13398740ea0 262 ProSitePatterns PS01090 TatD deoxyribonuclease family signature 2. 124 134 - T 22-04-2016 IPR018228 Deoxyribonuclease, TatD-related, conserved site GO:0016888 SRM_RS07740 edb79b2f5a670e403bacd13398740ea0 262 Gene3D G3DSA:3.20.20.140 1 259 2.3E-86 T 22-04-2016 SRM_RS07740 edb79b2f5a670e403bacd13398740ea0 262 SUPERFAMILY SSF51556 2 258 1.85E-82 T 22-04-2016 IPR032466 Metal-dependent hydrolase SRM_RS07740 edb79b2f5a670e403bacd13398740ea0 262 PIRSF PIRSF005902 1 261 1.0E-76 T 22-04-2016 IPR001130 TatD family GO:0016788 SRM_RS07740 edb79b2f5a670e403bacd13398740ea0 262 TIGRFAM TIGR00010 TIGR00010: hydrolase, TatD family 2 257 1.5E-79 T 22-04-2016 IPR015991 Uncharacterised deoxyribonuclease TatD-type GO:0004536 SRM_RS03310 4d9c0977ba5142e6f96c54be0b233ec4 352 Gene3D G3DSA:3.40.50.1820 17 345 5.0E-38 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold SRM_RS03310 4d9c0977ba5142e6f96c54be0b233ec4 352 SUPERFAMILY SSF53474 4 342 8.88E-91 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold SRM_RS03310 4d9c0977ba5142e6f96c54be0b233ec4 352 PANTHER PTHR32268 5 348 3.5E-155 T 22-04-2016 SRM_RS03310 4d9c0977ba5142e6f96c54be0b233ec4 352 Pfam PF00561 alpha/beta hydrolase fold 37 330 3.0E-38 T 22-04-2016 IPR000073 Alpha/beta hydrolase fold-1 SRM_RS03310 4d9c0977ba5142e6f96c54be0b233ec4 352 PIRSF PIRSF000443 1 350 7.2E-128 T 22-04-2016 IPR008220 Homoserine acetyltransferase GO:0004414|GO:0005737|GO:0009086 KEGG: 00270+2.3.1.31|MetaCyc: PWY-5344|UniPathway: UPA00051 SRM_RS03310 4d9c0977ba5142e6f96c54be0b233ec4 352 PANTHER PTHR32268:SF13 5 348 3.5E-155 T 22-04-2016 SRM_RS03310 4d9c0977ba5142e6f96c54be0b233ec4 352 TIGRFAM TIGR01392 homoserO_Ac_trn: homoserine O-acetyltransferase 8 340 4.2E-130 T 22-04-2016 IPR008220 Homoserine acetyltransferase GO:0004414|GO:0005737|GO:0009086 KEGG: 00270+2.3.1.31|MetaCyc: PWY-5344|UniPathway: UPA00051 SRM_RS06485 92308d84890aa7fcf45b0f6905301f90 99 PANTHER PTHR11620 4 60 2.3E-16 T 22-04-2016 SRM_RS06485 92308d84890aa7fcf45b0f6905301f90 99 PANTHER PTHR11620 78 99 2.3E-16 T 22-04-2016 SRM_RS06485 92308d84890aa7fcf45b0f6905301f90 99 SUPERFAMILY SSF54189 4 98 2.45E-23 T 22-04-2016 IPR012678 Ribosomal protein L23/L15e core domain GO:0003735|GO:0005622|GO:0005840|GO:0006412 SRM_RS06485 92308d84890aa7fcf45b0f6905301f90 99 Pfam PF00276 Ribosomal protein L23 5 95 1.8E-25 T 22-04-2016 IPR013025 Ribosomal protein L25/L23 GO:0003735|GO:0005840|GO:0006412 SRM_RS06485 92308d84890aa7fcf45b0f6905301f90 99 Hamap MF_01369_B 50S ribosomal protein L23 [rplW]. 3 98 18.227 T 22-04-2016 IPR013025 Ribosomal protein L25/L23 GO:0003735|GO:0005840|GO:0006412 SRM_RS06485 92308d84890aa7fcf45b0f6905301f90 99 Gene3D G3DSA:3.30.70.330 4 99 7.3E-26 T 22-04-2016 IPR012677 Nucleotide-binding alpha-beta plait domain GO:0000166 SRM_RS10075 13df70ff0db0b4713e9adcadcf8d7e66 335 SUPERFAMILY SSF53633 25 323 8.38E-64 T 22-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 SRM_RS10075 13df70ff0db0b4713e9adcadcf8d7e66 335 TIGRFAM TIGR00657 asp_kinases: aspartate kinase 25 326 3.3E-67 T 22-04-2016 IPR001341 Aspartate kinase domain GO:0004072|GO:0008652 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|UniPathway: UPA00034|UniPathway: UPA00050|UniPathway: UPA00051 SRM_RS10075 13df70ff0db0b4713e9adcadcf8d7e66 335 Gene3D G3DSA:3.40.1160.10 120 325 1.8E-54 T 22-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 SRM_RS10075 13df70ff0db0b4713e9adcadcf8d7e66 335 Gene3D G3DSA:3.40.1160.10 21 73 1.8E-54 T 22-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 SRM_RS10075 13df70ff0db0b4713e9adcadcf8d7e66 335 PANTHER PTHR21499:SF3 110 323 7.0E-58 T 22-04-2016 SRM_RS10075 13df70ff0db0b4713e9adcadcf8d7e66 335 PANTHER PTHR21499 110 323 7.0E-58 T 22-04-2016 SRM_RS10075 13df70ff0db0b4713e9adcadcf8d7e66 335 Pfam PF00696 Amino acid kinase family 25 310 9.0E-43 T 22-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 SRM_RS10075 13df70ff0db0b4713e9adcadcf8d7e66 335 ProSitePatterns PS00324 Aspartokinase signature. 27 35 - T 22-04-2016 IPR018042 Aspartate kinase, conserved site GO:0004072|GO:0008652 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|UniPathway: UPA00034|UniPathway: UPA00050|UniPathway: UPA00051 SRM_RS10075 13df70ff0db0b4713e9adcadcf8d7e66 335 PANTHER PTHR21499 22 83 7.0E-58 T 22-04-2016 SRM_RS10075 13df70ff0db0b4713e9adcadcf8d7e66 335 PANTHER PTHR21499:SF3 22 83 7.0E-58 T 22-04-2016 SRM_RS13500 7d5a9cb03a4921423f35f03acca3b27a 220 PANTHER PTHR10509 4 220 1.2E-102 T 22-04-2016 SRM_RS13500 7d5a9cb03a4921423f35f03acca3b27a 220 Pfam PF01596 O-methyltransferase 18 219 6.2E-68 T 22-04-2016 IPR002935 O-methyltransferase, family 3 GO:0008171 SRM_RS13500 7d5a9cb03a4921423f35f03acca3b27a 220 PANTHER PTHR10509:SF14 4 220 1.2E-102 T 22-04-2016 SRM_RS13500 7d5a9cb03a4921423f35f03acca3b27a 220 Gene3D G3DSA:3.40.50.150 5 220 2.0E-79 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SRM_RS13500 7d5a9cb03a4921423f35f03acca3b27a 220 SUPERFAMILY SSF53335 11 220 5.08E-51 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SRM_RS06570 f4582cda7a8ac3b21331b7e904a913c7 443 TIGRFAM TIGR00967 3a0501s007: preprotein translocase, SecY subunit 18 423 1.7E-115 T 22-04-2016 IPR002208 SecY/SEC61-alpha family GO:0015031|GO:0016020 Reactome: REACT_15380 SRM_RS06570 f4582cda7a8ac3b21331b7e904a913c7 443 SUPERFAMILY SSF103491 4 420 7.98E-116 T 22-04-2016 IPR023201 SecY subunit domain SRM_RS06570 f4582cda7a8ac3b21331b7e904a913c7 443 Pfam PF00344 SecY translocase 76 412 1.9E-109 T 22-04-2016 IPR002208 SecY/SEC61-alpha family GO:0015031|GO:0016020 Reactome: REACT_15380 SRM_RS06570 f4582cda7a8ac3b21331b7e904a913c7 443 Hamap MF_01465 Protein translocase subunit SecY [secY]. 8 429 28.704 T 22-04-2016 IPR026593 Protein translocase subunit SecY SRM_RS06570 f4582cda7a8ac3b21331b7e904a913c7 443 ProSitePatterns PS00756 Protein secY signature 2. 171 188 - T 22-04-2016 IPR030659 SecY conserved site SRM_RS06570 f4582cda7a8ac3b21331b7e904a913c7 443 PANTHER PTHR10906:SF2 5 443 1.2E-184 T 22-04-2016 SRM_RS06570 f4582cda7a8ac3b21331b7e904a913c7 443 PANTHER PTHR10906 5 443 1.2E-184 T 22-04-2016 IPR002208 SecY/SEC61-alpha family GO:0015031|GO:0016020 Reactome: REACT_15380 SRM_RS06570 f4582cda7a8ac3b21331b7e904a913c7 443 Gene3D G3DSA:1.10.3370.10 6 433 1.4E-147 T 22-04-2016 IPR023201 SecY subunit domain SRM_RS06570 f4582cda7a8ac3b21331b7e904a913c7 443 ProSitePatterns PS00755 Protein secY signature 1. 75 94 - T 22-04-2016 IPR030659 SecY conserved site SRM_RS06570 f4582cda7a8ac3b21331b7e904a913c7 443 PIRSF PIRSF004557 3 436 5.4E-115 T 22-04-2016 IPR002208 SecY/SEC61-alpha family GO:0015031|GO:0016020 Reactome: REACT_15380 SRM_RS06570 f4582cda7a8ac3b21331b7e904a913c7 443 PRINTS PR00303 Preprotein translocase SecY subunit signature 152 177 1.6E-91 T 22-04-2016 SRM_RS06570 f4582cda7a8ac3b21331b7e904a913c7 443 PRINTS PR00303 Preprotein translocase SecY subunit signature 363 381 1.6E-91 T 22-04-2016 SRM_RS06570 f4582cda7a8ac3b21331b7e904a913c7 443 PRINTS PR00303 Preprotein translocase SecY subunit signature 398 416 1.6E-91 T 22-04-2016 SRM_RS06570 f4582cda7a8ac3b21331b7e904a913c7 443 PRINTS PR00303 Preprotein translocase SecY subunit signature 74 94 1.6E-91 T 22-04-2016 SRM_RS06570 f4582cda7a8ac3b21331b7e904a913c7 443 PRINTS PR00303 Preprotein translocase SecY subunit signature 178 201 1.6E-91 T 22-04-2016 SRM_RS06570 f4582cda7a8ac3b21331b7e904a913c7 443 PRINTS PR00303 Preprotein translocase SecY subunit signature 308 330 1.6E-91 T 22-04-2016 SRM_RS06570 f4582cda7a8ac3b21331b7e904a913c7 443 PRINTS PR00303 Preprotein translocase SecY subunit signature 21 39 1.6E-91 T 22-04-2016 SRM_RS06570 f4582cda7a8ac3b21331b7e904a913c7 443 PRINTS PR00303 Preprotein translocase SecY subunit signature 267 286 1.6E-91 T 22-04-2016 SRM_RS06570 f4582cda7a8ac3b21331b7e904a913c7 443 PRINTS PR00303 Preprotein translocase SecY subunit signature 115 138 1.6E-91 T 22-04-2016 SRM_RS15250 9410713ef3ce391b00218a4aa9db2a80 403 PANTHER PTHR10188:SF24 99 403 5.6E-115 T 22-04-2016 SRM_RS15250 9410713ef3ce391b00218a4aa9db2a80 403 SUPERFAMILY SSF56235 99 395 2.44E-89 T 22-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal SRM_RS15250 9410713ef3ce391b00218a4aa9db2a80 403 PANTHER PTHR10188 99 403 5.6E-115 T 22-04-2016 IPR000246 Peptidase T2, asparaginase 2 GO:0016787 SRM_RS15250 9410713ef3ce391b00218a4aa9db2a80 403 Pfam PF01112 Asparaginase 99 395 6.5E-106 T 22-04-2016 IPR000246 Peptidase T2, asparaginase 2 GO:0016787 SRM_RS07785 5db86ff859cc690e18d6264c0acd5953 362 PANTHER PTHR40031 2 332 4.5E-34 T 22-04-2016 SRM_RS07785 5db86ff859cc690e18d6264c0acd5953 362 Pfam PF04307 LexA-binding, inner membrane-associated putative hydrolase 1 180 1.6E-30 T 22-04-2016 IPR007404 LexA-binding, inner membrane-associated putative hydrolase SRM_RS07785 5db86ff859cc690e18d6264c0acd5953 362 PANTHER PTHR40031:SF1 2 332 4.5E-34 T 22-04-2016 SRM_RS12750 b50f0f96a2db322567ecf258e7ce3f26 453 PANTHER PTHR11785:SF366 12 445 1.8E-99 T 22-04-2016 SRM_RS12750 b50f0f96a2db322567ecf258e7ce3f26 453 Pfam PF13520 Amino acid permease 13 416 3.5E-51 T 22-04-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 SRM_RS12750 b50f0f96a2db322567ecf258e7ce3f26 453 PANTHER PTHR11785 12 445 1.8E-99 T 22-04-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 SRM_RS12750 b50f0f96a2db322567ecf258e7ce3f26 453 PIRSF PIRSF006060 2 448 1.2E-84 T 22-04-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 SRM_RS04465 58f0484183d94e7cfbec34a78ea90c44 321 ProSitePatterns PS00671 D-isomer specific 2-hydroxyacid dehydrogenases signature 3. 228 244 - T 22-04-2016 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site SRM_RS04465 58f0484183d94e7cfbec34a78ea90c44 321 Gene3D G3DSA:3.40.50.720 4 115 4.8E-30 T 22-04-2016 IPR016040 NAD(P)-binding domain SRM_RS04465 58f0484183d94e7cfbec34a78ea90c44 321 Pfam PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain 18 315 1.7E-26 T 22-04-2016 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GO:0008152|GO:0016616|GO:0051287|GO:0055114 SRM_RS04465 58f0484183d94e7cfbec34a78ea90c44 321 SUPERFAMILY SSF52283 2 137 4.16E-31 T 22-04-2016 SRM_RS04465 58f0484183d94e7cfbec34a78ea90c44 321 ProSitePatterns PS00670 D-isomer specific 2-hydroxyacid dehydrogenases signature 2. 199 221 - T 22-04-2016 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site SRM_RS04465 58f0484183d94e7cfbec34a78ea90c44 321 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 111 288 8.2E-61 T 22-04-2016 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 SRM_RS04465 58f0484183d94e7cfbec34a78ea90c44 321 PANTHER PTHR10996 35 312 6.6E-113 T 22-04-2016 SRM_RS04465 58f0484183d94e7cfbec34a78ea90c44 321 ProSitePatterns PS00065 D-isomer specific 2-hydroxyacid dehydrogenases NAD-binding signature. 150 177 - T 22-04-2016 IPR029752 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 SRM_RS04465 58f0484183d94e7cfbec34a78ea90c44 321 SUPERFAMILY SSF51735 102 289 2.86E-60 T 22-04-2016 IPR016040 NAD(P)-binding domain SRM_RS04465 58f0484183d94e7cfbec34a78ea90c44 321 Gene3D G3DSA:3.40.50.720 116 291 2.5E-66 T 22-04-2016 IPR016040 NAD(P)-binding domain SRM_RS14260 9817f0b2f4d4309995ea788057a6af1b 300 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 61 3.3E-20 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 SRM_RS14260 9817f0b2f4d4309995ea788057a6af1b 300 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 9.5E-6 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 SRM_RS14260 9817f0b2f4d4309995ea788057a6af1b 300 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 9.5E-6 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 SRM_RS14260 9817f0b2f4d4309995ea788057a6af1b 300 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 9.5E-6 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 SRM_RS14260 9817f0b2f4d4309995ea788057a6af1b 300 SUPERFAMILY SSF53850 87 293 2.33E-37 T 22-04-2016 SRM_RS14260 9817f0b2f4d4309995ea788057a6af1b 300 Gene3D G3DSA:1.10.10.10 1 85 8.9E-29 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SRM_RS14260 9817f0b2f4d4309995ea788057a6af1b 300 Gene3D G3DSA:3.40.190.10 176 263 3.6E-27 T 22-04-2016 SRM_RS14260 9817f0b2f4d4309995ea788057a6af1b 300 PANTHER PTHR30346 1 294 2.2E-91 T 22-04-2016 SRM_RS14260 9817f0b2f4d4309995ea788057a6af1b 300 Pfam PF03466 LysR substrate binding domain 87 291 3.6E-42 T 22-04-2016 IPR005119 LysR, substrate-binding SRM_RS14260 9817f0b2f4d4309995ea788057a6af1b 300 SUPERFAMILY SSF46785 1 87 2.59E-22 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SRM_RS14260 9817f0b2f4d4309995ea788057a6af1b 300 Gene3D G3DSA:3.40.190.10 89 175 7.3E-28 T 22-04-2016 SRM_RS09470 7ae3e11b7e721376c36c2d5ffefc0d45 936 Pfam PF08447 PAS fold 598 680 7.2E-11 T 22-04-2016 IPR013655 PAS fold-3 GO:0005515 SRM_RS09470 7ae3e11b7e721376c36c2d5ffefc0d45 936 SMART SM00388 706 777 7.5E-17 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SRM_RS09470 7ae3e11b7e721376c36c2d5ffefc0d45 936 Gene3D G3DSA:3.30.450.20 312 431 4.9E-14 T 22-04-2016 SRM_RS09470 7ae3e11b7e721376c36c2d5ffefc0d45 936 PRINTS PR00344 Bacterial sensor protein C-terminal signature 893 911 1.2E-13 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SRM_RS09470 7ae3e11b7e721376c36c2d5ffefc0d45 936 PRINTS PR00344 Bacterial sensor protein C-terminal signature 876 886 1.2E-13 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SRM_RS09470 7ae3e11b7e721376c36c2d5ffefc0d45 936 PRINTS PR00344 Bacterial sensor protein C-terminal signature 858 872 1.2E-13 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SRM_RS09470 7ae3e11b7e721376c36c2d5ffefc0d45 936 PRINTS PR00344 Bacterial sensor protein C-terminal signature 917 930 1.2E-13 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SRM_RS09470 7ae3e11b7e721376c36c2d5ffefc0d45 936 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 190 320 3.2E-11 T 22-04-2016 IPR000014 PAS domain SRM_RS09470 7ae3e11b7e721376c36c2d5ffefc0d45 936 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 571 693 8.1E-9 T 22-04-2016 IPR000014 PAS domain SRM_RS09470 7ae3e11b7e721376c36c2d5ffefc0d45 936 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 323 441 1.2E-10 T 22-04-2016 IPR000014 PAS domain SRM_RS09470 7ae3e11b7e721376c36c2d5ffefc0d45 936 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 446 568 9.8E-12 T 22-04-2016 IPR000014 PAS domain SRM_RS09470 7ae3e11b7e721376c36c2d5ffefc0d45 936 SUPERFAMILY SSF47384 691 778 5.1E-18 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SRM_RS09470 7ae3e11b7e721376c36c2d5ffefc0d45 936 Gene3D G3DSA:3.30.450.20 563 684 5.2E-26 T 22-04-2016 SRM_RS09470 7ae3e11b7e721376c36c2d5ffefc0d45 936 Pfam PF00512 His Kinase A (phospho-acceptor) domain 707 777 2.0E-15 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SRM_RS09470 7ae3e11b7e721376c36c2d5ffefc0d45 936 SUPERFAMILY SSF55785 431 559 4.54E-17 T 22-04-2016 IPR000014 PAS domain SRM_RS09470 7ae3e11b7e721376c36c2d5ffefc0d45 936 SUPERFAMILY SSF55785 187 311 1.57E-16 T 22-04-2016 IPR000014 PAS domain SRM_RS09470 7ae3e11b7e721376c36c2d5ffefc0d45 936 SUPERFAMILY SSF55785 558 684 2.79E-18 T 22-04-2016 IPR000014 PAS domain SRM_RS09470 7ae3e11b7e721376c36c2d5ffefc0d45 936 SUPERFAMILY SSF55874 767 933 1.57E-40 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SRM_RS09470 7ae3e11b7e721376c36c2d5ffefc0d45 936 SMART SM00091 325 392 5.4 T 22-04-2016 IPR000014 PAS domain SRM_RS09470 7ae3e11b7e721376c36c2d5ffefc0d45 936 SMART SM00091 193 259 0.0031 T 22-04-2016 IPR000014 PAS domain SRM_RS09470 7ae3e11b7e721376c36c2d5ffefc0d45 936 SMART SM00091 442 515 1.9 T 22-04-2016 IPR000014 PAS domain SRM_RS09470 7ae3e11b7e721376c36c2d5ffefc0d45 936 SMART SM00091 573 640 0.023 T 22-04-2016 IPR000014 PAS domain SRM_RS09470 7ae3e11b7e721376c36c2d5ffefc0d45 936 Gene3D G3DSA:3.30.565.10 778 934 1.3E-42 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SRM_RS09470 7ae3e11b7e721376c36c2d5ffefc0d45 936 PANTHER PTHR24423 599 936 1.1E-110 T 22-04-2016 SRM_RS09470 7ae3e11b7e721376c36c2d5ffefc0d45 936 PANTHER PTHR24423 185 351 1.1E-110 T 22-04-2016 SRM_RS09470 7ae3e11b7e721376c36c2d5ffefc0d45 936 SMART SM00387 821 933 9.0E-34 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SRM_RS09470 7ae3e11b7e721376c36c2d5ffefc0d45 936 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 822 931 1.4E-22 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SRM_RS09470 7ae3e11b7e721376c36c2d5ffefc0d45 936 Gene3D G3DSA:3.30.450.20 432 559 3.3E-17 T 22-04-2016 SRM_RS09470 7ae3e11b7e721376c36c2d5ffefc0d45 936 Gene3D G3DSA:3.30.450.20 188 311 3.1E-18 T 22-04-2016 SRM_RS09470 7ae3e11b7e721376c36c2d5ffefc0d45 936 SUPERFAMILY SSF55785 309 425 1.13E-16 T 22-04-2016 IPR000014 PAS domain SRM_RS09470 7ae3e11b7e721376c36c2d5ffefc0d45 936 Gene3D G3DSA:1.10.287.130 698 773 1.8E-16 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SRM_RS09470 7ae3e11b7e721376c36c2d5ffefc0d45 936 SMART SM00086 272 313 5.6 T 22-04-2016 IPR001610 PAC motif SRM_RS09470 7ae3e11b7e721376c36c2d5ffefc0d45 936 SMART SM00086 392 434 81.0 T 22-04-2016 IPR001610 PAC motif SRM_RS09470 7ae3e11b7e721376c36c2d5ffefc0d45 936 SMART SM00086 644 686 0.043 T 22-04-2016 IPR001610 PAC motif SRM_RS09470 7ae3e11b7e721376c36c2d5ffefc0d45 936 SMART SM00086 516 561 500.0 T 22-04-2016 IPR001610 PAC motif SRM_RS09470 7ae3e11b7e721376c36c2d5ffefc0d45 936 Pfam PF08448 PAS fold 199 315 2.5E-12 T 22-04-2016 IPR013656 PAS fold-4 SRM_RS09470 7ae3e11b7e721376c36c2d5ffefc0d45 936 Pfam PF08448 PAS fold 332 436 1.8E-15 T 22-04-2016 IPR013656 PAS fold-4 SRM_RS09470 7ae3e11b7e721376c36c2d5ffefc0d45 936 Pfam PF08448 PAS fold 469 563 4.7E-14 T 22-04-2016 IPR013656 PAS fold-4 SRM_RS03195 254f222d97141ffcc6be7477712ac185 158 SUPERFAMILY SSF109635 33 119 9.81E-14 T 22-04-2016 SRM_RS03195 254f222d97141ffcc6be7477712ac185 158 PANTHER PTHR33823 10 151 5.1E-25 T 22-04-2016 SRM_RS03195 254f222d97141ffcc6be7477712ac185 158 Pfam PF01258 Prokaryotic dksA/traR C4-type zinc finger 118 150 1.7E-6 T 22-04-2016 IPR000962 Zinc finger, DksA/TraR C4-type GO:0008270 SRM_RS14685 bc2b434e060488688963a81bcff48a59 180 Pfam PF03781 Sulfatase-modifying factor enzyme 1 28 158 2.1E-12 T 22-04-2016 IPR005532 Sulfatase-modifying factor enzyme SRM_RS14685 bc2b434e060488688963a81bcff48a59 180 SUPERFAMILY SSF56436 11 143 3.3E-13 T 22-04-2016 IPR016187 C-type lectin fold SRM_RS14685 bc2b434e060488688963a81bcff48a59 180 Gene3D G3DSA:3.90.1580.10 13 144 1.5E-11 T 22-04-2016 IPR005532 Sulfatase-modifying factor enzyme SRM_RS03630 f31392782b75331f53d7efb79e3580a6 291 Gene3D G3DSA:3.40.50.150 33 61 1.8E-5 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SRM_RS03630 f31392782b75331f53d7efb79e3580a6 291 Pfam PF01230 HIT domain 177 267 3.1E-10 T 22-04-2016 IPR001310 Histidine triad (HIT) protein SRM_RS03630 f31392782b75331f53d7efb79e3580a6 291 Pfam PF13489 Methyltransferase domain 32 116 2.1E-10 T 22-04-2016 SRM_RS03630 f31392782b75331f53d7efb79e3580a6 291 Gene3D G3DSA:3.30.428.10 166 268 1.5E-21 T 22-04-2016 IPR011146 HIT-like domain GO:0003824 SRM_RS03630 f31392782b75331f53d7efb79e3580a6 291 SUPERFAMILY SSF53335 19 156 4.18E-14 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SRM_RS03630 f31392782b75331f53d7efb79e3580a6 291 SUPERFAMILY SSF54197 150 274 6.5E-22 T 22-04-2016 IPR011146 HIT-like domain GO:0003824 SRM_RS03630 f31392782b75331f53d7efb79e3580a6 291 Gene3D G3DSA:3.40.50.150 68 127 3.6E-5 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SRM_RS08615 492b1ff3c318253f6b8f78e1449dee6f 356 Gene3D G3DSA:3.40.190.80 214 346 3.3E-50 T 22-04-2016 SRM_RS08615 492b1ff3c318253f6b8f78e1449dee6f 356 Pfam PF00316 Fructose-1-6-bisphosphatase, N-terminal domain 19 211 3.1E-60 T 22-04-2016 IPR033391 Fructose-1-6-bisphosphatase class I, N-terminal KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|UniPathway: UPA00138 SRM_RS08615 492b1ff3c318253f6b8f78e1449dee6f 356 PIRSF PIRSF000904 15 350 4.3E-109 T 22-04-2016 IPR000146 Fructose-1,6-bisphosphatase class 1 GO:0005975|GO:0042132|GO:0042578 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: REACT_474|UniPathway: UPA00138 SRM_RS08615 492b1ff3c318253f6b8f78e1449dee6f 356 Gene3D G3DSA:3.30.540.10 19 212 2.9E-66 T 22-04-2016 SRM_RS08615 492b1ff3c318253f6b8f78e1449dee6f 356 PRINTS PR00115 Fructose-1,6-bisphosphatase signature 321 346 5.2E-55 T 22-04-2016 IPR028343 Fructose-1,6-bisphosphatase KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|UniPathway: UPA00138 SRM_RS08615 492b1ff3c318253f6b8f78e1449dee6f 356 PRINTS PR00115 Fructose-1,6-bisphosphatase signature 81 107 5.2E-55 T 22-04-2016 IPR028343 Fructose-1,6-bisphosphatase KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|UniPathway: UPA00138 SRM_RS08615 492b1ff3c318253f6b8f78e1449dee6f 356 PRINTS PR00115 Fructose-1,6-bisphosphatase signature 196 219 5.2E-55 T 22-04-2016 IPR028343 Fructose-1,6-bisphosphatase KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|UniPathway: UPA00138 SRM_RS08615 492b1ff3c318253f6b8f78e1449dee6f 356 PRINTS PR00115 Fructose-1,6-bisphosphatase signature 44 71 5.2E-55 T 22-04-2016 IPR028343 Fructose-1,6-bisphosphatase KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|UniPathway: UPA00138 SRM_RS08615 492b1ff3c318253f6b8f78e1449dee6f 356 PRINTS PR00115 Fructose-1,6-bisphosphatase signature 165 188 5.2E-55 T 22-04-2016 IPR028343 Fructose-1,6-bisphosphatase KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|UniPathway: UPA00138 SRM_RS08615 492b1ff3c318253f6b8f78e1449dee6f 356 PRINTS PR00115 Fructose-1,6-bisphosphatase signature 222 249 5.2E-55 T 22-04-2016 IPR028343 Fructose-1,6-bisphosphatase KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|UniPathway: UPA00138 SRM_RS08615 492b1ff3c318253f6b8f78e1449dee6f 356 PANTHER PTHR11556 18 354 8.4E-146 T 22-04-2016 IPR000146 Fructose-1,6-bisphosphatase class 1 GO:0005975|GO:0042132|GO:0042578 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: REACT_474|UniPathway: UPA00138 SRM_RS08615 492b1ff3c318253f6b8f78e1449dee6f 356 Hamap MF_01855 Fructose-1,6-bisphosphatase class 1 [fbp]. 19 347 39.452 T 22-04-2016 IPR000146 Fructose-1,6-bisphosphatase class 1 GO:0005975|GO:0042132|GO:0042578 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: REACT_474|UniPathway: UPA00138 SRM_RS08615 492b1ff3c318253f6b8f78e1449dee6f 356 PIRSF PIRSF500210 16 349 3.5E-111 T 22-04-2016 IPR028343 Fructose-1,6-bisphosphatase KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|UniPathway: UPA00138 SRM_RS08615 492b1ff3c318253f6b8f78e1449dee6f 356 SUPERFAMILY SSF56655 17 345 1.41E-97 T 22-04-2016 SRM_RS12195 b65553fab88cca85c18bbd562e391a06 533 SUPERFAMILY SSF110921 406 510 2.75E-21 T 22-04-2016 IPR013709 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871|UniPathway: UPA00048 SRM_RS12195 b65553fab88cca85c18bbd562e391a06 533 PANTHER PTHR10277 1 522 4.2E-245 T 22-04-2016 SRM_RS12195 b65553fab88cca85c18bbd562e391a06 533 Pfam PF08502 LeuA allosteric (dimerisation) domain 375 513 7.7E-24 T 22-04-2016 IPR013709 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871|UniPathway: UPA00048 SRM_RS12195 b65553fab88cca85c18bbd562e391a06 533 TIGRFAM TIGR00977 citramal_synth: citramalate synthase 5 515 6.0E-205 T 22-04-2016 IPR005675 Citramalate synthase GO:0019752|GO:0046912 KEGG: 00290+2.3.1.182|KEGG: 00660+2.3.1.182|MetaCyc: PWY-5101|UniPathway: UPA00047 SRM_RS12195 b65553fab88cca85c18bbd562e391a06 533 PANTHER PTHR10277:SF5 1 522 4.2E-245 T 22-04-2016 IPR005675 Citramalate synthase GO:0019752|GO:0046912 KEGG: 00290+2.3.1.182|KEGG: 00660+2.3.1.182|MetaCyc: PWY-5101|UniPathway: UPA00047 SRM_RS12195 b65553fab88cca85c18bbd562e391a06 533 SUPERFAMILY SSF51569 1 293 8.06E-79 T 22-04-2016 SRM_RS12195 b65553fab88cca85c18bbd562e391a06 533 ProSitePatterns PS00815 Alpha-isopropylmalate and homocitrate synthases signature 1. 12 28 - T 22-04-2016 IPR002034 Alpha-isopropylmalate/homocitrate synthase, conserved site GO:0019752|GO:0046912 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871|UniPathway: UPA00048 SRM_RS12195 b65553fab88cca85c18bbd562e391a06 533 Gene3D G3DSA:3.20.20.70 1 349 2.0E-117 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 SRM_RS12195 b65553fab88cca85c18bbd562e391a06 533 Pfam PF00682 HMGL-like 5 253 8.4E-47 T 22-04-2016 IPR000891 Pyruvate carboxyltransferase GO:0003824 SRM_RS12195 b65553fab88cca85c18bbd562e391a06 533 SMART SM00917 373 514 2.5E-37 T 22-04-2016 IPR013709 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871|UniPathway: UPA00048 SRM_RS15135 3555cd3a6e7d3cc3b07ea622bbdca8a7 421 Pfam PF00109 Beta-ketoacyl synthase, N-terminal domain 8 254 5.0E-57 T 22-04-2016 IPR014030 Beta-ketoacyl synthase, N-terminal SRM_RS15135 3555cd3a6e7d3cc3b07ea622bbdca8a7 421 Gene3D G3DSA:3.40.47.10 8 265 2.8E-73 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 SRM_RS15135 3555cd3a6e7d3cc3b07ea622bbdca8a7 421 PANTHER PTHR11712 6 420 1.1E-186 T 22-04-2016 SRM_RS15135 3555cd3a6e7d3cc3b07ea622bbdca8a7 421 SMART SM00825 Beta-ketoacyl synthase 10 421 7.3E-15 T 22-04-2016 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain SRM_RS15135 3555cd3a6e7d3cc3b07ea622bbdca8a7 421 ProSitePatterns PS00606 Beta-ketoacyl synthases active site. 162 178 - T 22-04-2016 IPR018201 Beta-ketoacyl synthase, active site SRM_RS15135 3555cd3a6e7d3cc3b07ea622bbdca8a7 421 TIGRFAM TIGR03150 fabF: beta-ketoacyl-acyl-carrier-protein synthase II 8 416 5.6E-173 T 22-04-2016 IPR017568 3-oxoacyl-[acyl-carrier-protein] synthase 2 GO:0006633|GO:0016747 UniPathway: UPA00094 SRM_RS15135 3555cd3a6e7d3cc3b07ea622bbdca8a7 421 SUPERFAMILY SSF53901 8 258 8.4E-74 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 SRM_RS15135 3555cd3a6e7d3cc3b07ea622bbdca8a7 421 SUPERFAMILY SSF53901 222 418 9.36E-68 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 SRM_RS15135 3555cd3a6e7d3cc3b07ea622bbdca8a7 421 PIRSF PIRSF000447 5 421 4.5E-163 T 22-04-2016 IPR017568 3-oxoacyl-[acyl-carrier-protein] synthase 2 GO:0006633|GO:0016747 UniPathway: UPA00094 SRM_RS15135 3555cd3a6e7d3cc3b07ea622bbdca8a7 421 Pfam PF02801 Beta-ketoacyl synthase, C-terminal domain 262 376 3.8E-35 T 22-04-2016 IPR014031 Beta-ketoacyl synthase, C-terminal SRM_RS15135 3555cd3a6e7d3cc3b07ea622bbdca8a7 421 Gene3D G3DSA:3.40.47.10 271 419 8.0E-56 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 SRM_RS01455 a743fb6f2f9d8b189f5aec91fe6ccf15 451 PANTHER PTHR24423 260 443 1.8E-40 T 22-04-2016 SRM_RS01455 a743fb6f2f9d8b189f5aec91fe6ccf15 451 PANTHER PTHR24423 192 231 1.8E-40 T 22-04-2016 SRM_RS01455 a743fb6f2f9d8b189f5aec91fe6ccf15 451 PRINTS PR00344 Bacterial sensor protein C-terminal signature 398 408 5.6E-7 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SRM_RS01455 a743fb6f2f9d8b189f5aec91fe6ccf15 451 PRINTS PR00344 Bacterial sensor protein C-terminal signature 409 427 5.6E-7 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SRM_RS01455 a743fb6f2f9d8b189f5aec91fe6ccf15 451 PRINTS PR00344 Bacterial sensor protein C-terminal signature 380 394 5.6E-7 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SRM_RS01455 a743fb6f2f9d8b189f5aec91fe6ccf15 451 Gene3D G3DSA:3.30.450.40 92 202 7.8E-13 T 22-04-2016 IPR029016 GAF domain-like SRM_RS01455 a743fb6f2f9d8b189f5aec91fe6ccf15 451 PANTHER PTHR24423:SF467 260 443 1.8E-40 T 22-04-2016 SRM_RS01455 a743fb6f2f9d8b189f5aec91fe6ccf15 451 PANTHER PTHR24423:SF467 192 231 1.8E-40 T 22-04-2016 SRM_RS01455 a743fb6f2f9d8b189f5aec91fe6ccf15 451 Gene3D G3DSA:1.10.287.130 263 291 6.4E-10 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SRM_RS01455 a743fb6f2f9d8b189f5aec91fe6ccf15 451 Gene3D G3DSA:1.10.287.130 203 229 6.4E-10 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SRM_RS01455 a743fb6f2f9d8b189f5aec91fe6ccf15 451 Pfam PF00512 His Kinase A (phospho-acceptor) domain 205 291 2.8E-10 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SRM_RS01455 a743fb6f2f9d8b189f5aec91fe6ccf15 451 Gene3D G3DSA:3.30.565.10 345 444 3.3E-26 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SRM_RS01455 a743fb6f2f9d8b189f5aec91fe6ccf15 451 SUPERFAMILY SSF55781 96 207 3.27E-16 T 22-04-2016 IPR029016 GAF domain-like SRM_RS01455 a743fb6f2f9d8b189f5aec91fe6ccf15 451 SMART SM00388 203 296 2.7E-5 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SRM_RS01455 a743fb6f2f9d8b189f5aec91fe6ccf15 451 SUPERFAMILY SSF55874 344 444 4.98E-26 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SRM_RS01455 a743fb6f2f9d8b189f5aec91fe6ccf15 451 SMART SM00387 347 449 7.8E-26 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SRM_RS01455 a743fb6f2f9d8b189f5aec91fe6ccf15 451 SUPERFAMILY SSF47384 191 292 1.51E-8 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SRM_RS01455 a743fb6f2f9d8b189f5aec91fe6ccf15 451 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 348 444 4.3E-16 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SRM_RS01455 a743fb6f2f9d8b189f5aec91fe6ccf15 451 SMART SM00065 35 205 8.4E-7 T 22-04-2016 IPR003018 GAF domain GO:0005515 SRM_RS01455 a743fb6f2f9d8b189f5aec91fe6ccf15 451 Pfam PF01590 GAF domain 111 191 4.5E-6 T 22-04-2016 IPR003018 GAF domain GO:0005515 SRM_RS11700 a99a8c86ecbada5e923f3c28fb99ba5a 479 PANTHER PTHR22773 42 313 5.0E-77 T 22-04-2016 SRM_RS11700 a99a8c86ecbada5e923f3c28fb99ba5a 479 PANTHER PTHR22773:SF67 42 313 5.0E-77 T 22-04-2016 SRM_RS11700 a99a8c86ecbada5e923f3c28fb99ba5a 479 Pfam PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus 42 80 1.5E-7 T 22-04-2016 IPR001516 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminal SRM_RS11700 a99a8c86ecbada5e923f3c28fb99ba5a 479 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 207 233 3.2E-17 T 22-04-2016 SRM_RS11700 a99a8c86ecbada5e923f3c28fb99ba5a 479 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 274 286 3.2E-17 T 22-04-2016 SRM_RS11700 a99a8c86ecbada5e923f3c28fb99ba5a 479 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 45 70 3.2E-17 T 22-04-2016 SRM_RS11700 a99a8c86ecbada5e923f3c28fb99ba5a 479 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 185 206 3.2E-17 T 22-04-2016 SRM_RS11700 a99a8c86ecbada5e923f3c28fb99ba5a 479 Pfam PF00361 Proton-conducting membrane transporter 96 316 6.8E-37 T 22-04-2016 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit Reactome: REACT_6305 SRM_RS13570 c276ff6aa0c737c54509a3a1449cf77b 149 PANTHER PTHR13822 1 140 1.2E-22 T 22-04-2016 IPR001469 ATPase, F1 complex, delta/epsilon subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 SRM_RS13570 c276ff6aa0c737c54509a3a1449cf77b 149 Gene3D G3DSA:1.20.5.440 100 140 4.9E-5 T 22-04-2016 SRM_RS13570 c276ff6aa0c737c54509a3a1449cf77b 149 Gene3D G3DSA:2.60.15.10 4 99 6.5E-22 T 22-04-2016 IPR020546 ATPase, F1 complex, delta/epsilon subunit, N-terminal GO:0015986|GO:0045261|GO:0046933|GO:0046961 SRM_RS13570 c276ff6aa0c737c54509a3a1449cf77b 149 ProDom PD000944 ATP SYNTHASE ION EPSILON SUBUNIT HYDROLASE CF1 SYNTHESIS CHAIN HYDROGEN 10 98 5.0E-10 T 22-04-2016 IPR020546 ATPase, F1 complex, delta/epsilon subunit, N-terminal GO:0015986|GO:0045261|GO:0046933|GO:0046961 SRM_RS13570 c276ff6aa0c737c54509a3a1449cf77b 149 TIGRFAM TIGR01216 ATP_synt_epsi: ATP synthase F1, epsilon subunit 5 140 3.3E-23 T 22-04-2016 IPR001469 ATPase, F1 complex, delta/epsilon subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 SRM_RS13570 c276ff6aa0c737c54509a3a1449cf77b 149 Hamap MF_00530 ATP synthase epsilon chain [atpC]. 3 139 18.694 T 22-04-2016 IPR001469 ATPase, F1 complex, delta/epsilon subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 SRM_RS13570 c276ff6aa0c737c54509a3a1449cf77b 149 Pfam PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain 97 140 3.7E-9 T 22-04-2016 IPR020547 ATP synthase delta/epsilon subunit, C-terminal domain SRM_RS13570 c276ff6aa0c737c54509a3a1449cf77b 149 Pfam PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain 5 92 4.6E-28 T 22-04-2016 IPR020546 ATPase, F1 complex, delta/epsilon subunit, N-terminal GO:0015986|GO:0045261|GO:0046933|GO:0046961 SRM_RS13570 c276ff6aa0c737c54509a3a1449cf77b 149 SUPERFAMILY SSF51344 4 94 7.46E-17 T 22-04-2016 IPR020546 ATPase, F1 complex, delta/epsilon subunit, N-terminal GO:0015986|GO:0045261|GO:0046933|GO:0046961 SRM_RS10450 3cadf0c5b7ad764307617596305cc5a2 683 Gene3D G3DSA:3.40.50.300 182 365 1.9E-63 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SRM_RS10450 3cadf0c5b7ad764307617596305cc5a2 683 TIGRFAM TIGR01241 FtsH_fam: ATP-dependent metallopeptidase HflB 140 627 1.8E-218 T 22-04-2016 IPR005936 Peptidase, FtsH GO:0004222|GO:0016020 SRM_RS10450 3cadf0c5b7ad764307617596305cc5a2 683 Gene3D G3DSA:1.10.8.60 366 432 3.3E-27 T 22-04-2016 SRM_RS10450 3cadf0c5b7ad764307617596305cc5a2 683 Pfam PF01434 Peptidase family M41 419 624 4.6E-75 T 22-04-2016 IPR000642 Peptidase M41 GO:0004222|GO:0005524|GO:0006508 SRM_RS10450 3cadf0c5b7ad764307617596305cc5a2 683 Pfam PF06480 FtsH Extracellular 29 130 9.6E-17 T 22-04-2016 IPR011546 Peptidase M41, FtsH extracellular GO:0004222|GO:0005524|GO:0008270|GO:0016021 SRM_RS10450 3cadf0c5b7ad764307617596305cc5a2 683 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 224 356 3.0E-44 T 22-04-2016 IPR003959 ATPase, AAA-type, core GO:0005524 SRM_RS10450 3cadf0c5b7ad764307617596305cc5a2 683 Hamap MF_01458 ATP-dependent zinc metalloprotease FtsH [ftsH]. 4 649 36.181 T 22-04-2016 IPR005936 Peptidase, FtsH GO:0004222|GO:0016020 SRM_RS10450 3cadf0c5b7ad764307617596305cc5a2 683 SMART SM00382 220 359 8.0E-24 T 22-04-2016 IPR003593 AAA+ ATPase domain SRM_RS10450 3cadf0c5b7ad764307617596305cc5a2 683 ProSitePatterns PS00674 AAA-protein family signature. 327 345 - T 22-04-2016 IPR003960 ATPase, AAA-type, conserved site GO:0005524 SRM_RS10450 3cadf0c5b7ad764307617596305cc5a2 683 PANTHER PTHR23076 28 657 5.0E-294 T 22-04-2016 SRM_RS10450 3cadf0c5b7ad764307617596305cc5a2 683 SUPERFAMILY SSF140990 438 629 4.05E-68 T 22-04-2016 SRM_RS10450 3cadf0c5b7ad764307617596305cc5a2 683 SUPERFAMILY SSF52540 182 428 1.8E-73 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SRM_RS00285 badafa14d71b5aeb61696af86e091582 185 Gene3D G3DSA:3.90.870.10 1 47 1.9E-9 T 22-04-2016 IPR017945 DHBP synthase RibB-like alpha/beta domain SRM_RS00285 badafa14d71b5aeb61696af86e091582 185 PANTHER PTHR21327:SF6 1 185 7.6E-56 T 22-04-2016 SRM_RS00285 badafa14d71b5aeb61696af86e091582 185 PANTHER PTHR21327 1 185 7.6E-56 T 22-04-2016 SRM_RS00285 badafa14d71b5aeb61696af86e091582 185 Pfam PF00925 GTP cyclohydrolase II 43 185 1.4E-40 T 22-04-2016 IPR032677 GTP cyclohydrolase II KEGG: 00740+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|UniPathway: UPA00275 SRM_RS00285 badafa14d71b5aeb61696af86e091582 185 Pfam PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase 1 34 1.4E-4 T 22-04-2016 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB GO:0008686|GO:0009231 KEGG: 00740+4.1.99.12|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 SRM_RS00285 badafa14d71b5aeb61696af86e091582 185 SUPERFAMILY SSF142695 40 185 2.88E-41 T 22-04-2016 IPR032677 GTP cyclohydrolase II KEGG: 00740+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|UniPathway: UPA00275 SRM_RS00285 badafa14d71b5aeb61696af86e091582 185 SUPERFAMILY SSF55821 1 42 1.9E-7 T 22-04-2016 IPR017945 DHBP synthase RibB-like alpha/beta domain SRM_RS11760 b6bacb37d905bb90258d9c6af5dc892b 278 SUPERFAMILY SSF56534 28 273 1.28E-88 T 22-04-2016 IPR019774 Aromatic amino acid hydroxylase, C-terminal GO:0016714|GO:0055114 SRM_RS11760 b6bacb37d905bb90258d9c6af5dc892b 278 Gene3D G3DSA:1.10.800.10 35 273 2.2E-87 T 22-04-2016 IPR001273 Aromatic amino acid hydroxylase GO:0004497|GO:0005506|GO:0009072|GO:0055114 SRM_RS11760 b6bacb37d905bb90258d9c6af5dc892b 278 PANTHER PTHR11473 43 274 1.3E-70 T 22-04-2016 IPR001273 Aromatic amino acid hydroxylase GO:0004497|GO:0005506|GO:0009072|GO:0055114 SRM_RS11760 b6bacb37d905bb90258d9c6af5dc892b 278 Pfam PF00351 Biopterin-dependent aromatic amino acid hydroxylase 43 273 9.6E-53 T 22-04-2016 IPR019774 Aromatic amino acid hydroxylase, C-terminal GO:0016714|GO:0055114 SRM_RS11760 b6bacb37d905bb90258d9c6af5dc892b 278 PANTHER PTHR11473:SF24 43 274 1.3E-70 T 22-04-2016 SRM_RS11760 b6bacb37d905bb90258d9c6af5dc892b 278 PRINTS PR00372 Biopterin-dependent aromatic amino acid hydroxylase signature 242 261 3.3E-9 T 22-04-2016 IPR019774 Aromatic amino acid hydroxylase, C-terminal GO:0016714|GO:0055114 SRM_RS11760 b6bacb37d905bb90258d9c6af5dc892b 278 PRINTS PR00372 Biopterin-dependent aromatic amino acid hydroxylase signature 106 128 3.3E-9 T 22-04-2016 IPR019774 Aromatic amino acid hydroxylase, C-terminal GO:0016714|GO:0055114 SRM_RS11760 b6bacb37d905bb90258d9c6af5dc892b 278 PRINTS PR00372 Biopterin-dependent aromatic amino acid hydroxylase signature 210 228 3.3E-9 T 22-04-2016 IPR019774 Aromatic amino acid hydroxylase, C-terminal GO:0016714|GO:0055114 SRM_RS11760 b6bacb37d905bb90258d9c6af5dc892b 278 ProSitePatterns PS00367 Biopterin-dependent aromatic amino acid hydroxylases signature. 149 160 - T 22-04-2016 IPR018301 Aromatic amino acid hydroxylase, iron/copper binding site GO:0004497|GO:0005506|GO:0009072|GO:0055114 SRM_RS05480 87ed5631561657b9f2106e4377165fcb 622 PANTHER PTHR10357:SF160 1 620 3.9E-291 T 22-04-2016 SRM_RS05480 87ed5631561657b9f2106e4377165fcb 622 PIRSF PIRSF000463 1 622 4.7E-248 T 22-04-2016 IPR006407 1,4-alpha-glucan-branching enzyme, GlgB GO:0003844|GO:0005978 KEGG: 00500+2.4.1.18|MetaCyc: PWY-5067|MetaCyc: PWY-622|UniPathway: UPA00164 SRM_RS05480 87ed5631561657b9f2106e4377165fcb 622 SUPERFAMILY SSF51445 63 515 6.41E-102 T 22-04-2016 IPR017853 Glycoside hydrolase superfamily SRM_RS05480 87ed5631561657b9f2106e4377165fcb 622 Pfam PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) 24 100 2.2E-19 T 22-04-2016 IPR004193 Glycoside hydrolase, family 13, N-terminal GO:0004553|GO:0005975 SRM_RS05480 87ed5631561657b9f2106e4377165fcb 622 TIGRFAM TIGR01515 branching_enzym: 1,4-alpha-glucan branching enzyme 8 618 1.7E-232 T 22-04-2016 IPR006407 1,4-alpha-glucan-branching enzyme, GlgB GO:0003844|GO:0005978 KEGG: 00500+2.4.1.18|MetaCyc: PWY-5067|MetaCyc: PWY-622|UniPathway: UPA00164 SRM_RS05480 87ed5631561657b9f2106e4377165fcb 622 Gene3D G3DSA:2.60.40.10 14 108 2.3E-28 T 22-04-2016 IPR013783 Immunoglobulin-like fold SRM_RS05480 87ed5631561657b9f2106e4377165fcb 622 Pfam PF00128 Alpha amylase, catalytic domain 175 247 1.2E-7 T 22-04-2016 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 SRM_RS05480 87ed5631561657b9f2106e4377165fcb 622 SMART SM00642 149 494 2.7E-7 T 22-04-2016 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 SRM_RS05480 87ed5631561657b9f2106e4377165fcb 622 Gene3D G3DSA:2.60.40.1180 520 620 3.8E-34 T 22-04-2016 IPR013780 Glycosyl hydrolase, all-beta SRM_RS05480 87ed5631561657b9f2106e4377165fcb 622 SUPERFAMILY SSF51011 520 620 2.7E-32 T 22-04-2016 SRM_RS05480 87ed5631561657b9f2106e4377165fcb 622 Hamap MF_00685 1,4-alpha-glucan branching enzyme GlgB [glgB]. 1 621 40.613 T 22-04-2016 IPR006407 1,4-alpha-glucan-branching enzyme, GlgB GO:0003844|GO:0005978 KEGG: 00500+2.4.1.18|MetaCyc: PWY-5067|MetaCyc: PWY-622|UniPathway: UPA00164 SRM_RS05480 87ed5631561657b9f2106e4377165fcb 622 PANTHER PTHR10357 1 620 3.9E-291 T 22-04-2016 IPR015902 Glycoside hydrolase, family 13 GO:0003824 SRM_RS05480 87ed5631561657b9f2106e4377165fcb 622 SUPERFAMILY SSF81296 16 108 7.17E-26 T 22-04-2016 IPR014756 Immunoglobulin E-set SRM_RS05480 87ed5631561657b9f2106e4377165fcb 622 Pfam PF02806 Alpha amylase, C-terminal all-beta domain 524 620 1.8E-20 T 22-04-2016 IPR006048 Alpha-amylase/branching enzyme, C-terminal all beta GO:0003824|GO:0005975|GO:0043169 KEGG: 00500+2.4.1.18|MetaCyc: PWY-5067|MetaCyc: PWY-622|Reactome: REACT_474 SRM_RS05480 87ed5631561657b9f2106e4377165fcb 622 Gene3D G3DSA:3.20.20.80 145 509 2.0E-83 T 22-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 SRM_RS13925 ad26dd76189ca1a30455cdbb484c2d93 201 PANTHER PTHR30173 1 192 2.3E-36 T 22-04-2016 SRM_RS13925 ad26dd76189ca1a30455cdbb484c2d93 201 Pfam PF04545 Sigma-70, region 4 137 185 1.9E-8 T 22-04-2016 IPR007630 RNA polymerase sigma-70 region 4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 SRM_RS13925 ad26dd76189ca1a30455cdbb484c2d93 201 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 20 187 1.8E-31 T 22-04-2016 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 SRM_RS13925 ad26dd76189ca1a30455cdbb484c2d93 201 Gene3D G3DSA:1.10.10.10 125 188 9.1E-16 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SRM_RS13925 ad26dd76189ca1a30455cdbb484c2d93 201 SUPERFAMILY SSF88659 100 188 2.8E-16 T 22-04-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 SRM_RS13925 ad26dd76189ca1a30455cdbb484c2d93 201 Gene3D G3DSA:1.10.1740.10 3 119 5.0E-25 T 22-04-2016 SRM_RS13925 ad26dd76189ca1a30455cdbb484c2d93 201 Pfam PF04542 Sigma-70 region 2 24 94 3.6E-13 T 22-04-2016 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 SRM_RS13925 ad26dd76189ca1a30455cdbb484c2d93 201 SUPERFAMILY SSF88946 3 105 1.04E-23 T 22-04-2016 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 SRM_RS05905 35acd237a1076c43923ab84cc8fd9d75 1308 Gene3D G3DSA:3.30.2090.10 179 266 2.8E-15 T 22-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains SRM_RS05905 35acd237a1076c43923ab84cc8fd9d75 1308 Gene3D G3DSA:3.30.70.1430 40 140 2.5E-31 T 22-04-2016 SRM_RS05905 35acd237a1076c43923ab84cc8fd9d75 1308 Gene3D G3DSA:3.30.2090.10 927 1013 1.2E-22 T 22-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains SRM_RS05905 35acd237a1076c43923ab84cc8fd9d75 1308 PRINTS PR00702 Acriflavin resistance protein family signature 401 425 1.0E-28 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 SRM_RS05905 35acd237a1076c43923ab84cc8fd9d75 1308 PRINTS PR00702 Acriflavin resistance protein family signature 38 56 1.0E-28 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 SRM_RS05905 35acd237a1076c43923ab84cc8fd9d75 1308 PRINTS PR00702 Acriflavin resistance protein family signature 454 477 1.0E-28 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 SRM_RS05905 35acd237a1076c43923ab84cc8fd9d75 1308 PRINTS PR00702 Acriflavin resistance protein family signature 347 370 1.0E-28 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 SRM_RS05905 35acd237a1076c43923ab84cc8fd9d75 1308 PRINTS PR00702 Acriflavin resistance protein family signature 479 502 1.0E-28 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 SRM_RS05905 35acd237a1076c43923ab84cc8fd9d75 1308 SUPERFAMILY SSF82866 309 505 8.5E-42 T 22-04-2016 SRM_RS05905 35acd237a1076c43923ab84cc8fd9d75 1308 SUPERFAMILY SSF82714 927 1013 5.23E-20 T 22-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains SRM_RS05905 35acd237a1076c43923ab84cc8fd9d75 1308 SUPERFAMILY SSF82866 1010 1253 3.66E-45 T 22-04-2016 SRM_RS05905 35acd237a1076c43923ab84cc8fd9d75 1308 Pfam PF00873 AcrB/AcrD/AcrF family 740 1252 4.7E-92 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 SRM_RS05905 35acd237a1076c43923ab84cc8fd9d75 1308 Pfam PF00873 AcrB/AcrD/AcrF family 3 512 1.0E-108 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 SRM_RS05905 35acd237a1076c43923ab84cc8fd9d75 1308 SUPERFAMILY SSF82693 40 134 3.01E-27 T 22-04-2016 SRM_RS05905 35acd237a1076c43923ab84cc8fd9d75 1308 PANTHER PTHR32063 298 512 6.0E-289 T 22-04-2016 SRM_RS05905 35acd237a1076c43923ab84cc8fd9d75 1308 PANTHER PTHR32063 1 274 6.0E-289 T 22-04-2016 SRM_RS05905 35acd237a1076c43923ab84cc8fd9d75 1308 PANTHER PTHR32063 1216 1298 6.0E-289 T 22-04-2016 SRM_RS05905 35acd237a1076c43923ab84cc8fd9d75 1308 PANTHER PTHR32063 705 1197 6.0E-289 T 22-04-2016 SRM_RS05905 35acd237a1076c43923ab84cc8fd9d75 1308 SUPERFAMILY SSF82714 180 264 5.62E-15 T 22-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains SRM_RS05905 35acd237a1076c43923ab84cc8fd9d75 1308 Gene3D G3DSA:1.20.1640.10 304 508 2.4E-50 T 22-04-2016 SRM_RS05905 35acd237a1076c43923ab84cc8fd9d75 1308 Gene3D G3DSA:1.10.3850.10 1018 1253 4.6E-61 T 22-04-2016 SRM_RS05905 35acd237a1076c43923ab84cc8fd9d75 1308 SUPERFAMILY SSF82693 287 341 1.99E-9 T 22-04-2016 SRM_RS05905 35acd237a1076c43923ab84cc8fd9d75 1308 SUPERFAMILY SSF82693 137 179 1.99E-9 T 22-04-2016 SRM_RS03335 e818042dac239727fef5454ca78b31bf 580 SUPERFAMILY SSF51905 2 256 1.12E-73 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SRM_RS03335 e818042dac239727fef5454ca78b31bf 580 SUPERFAMILY SSF51905 354 423 1.12E-73 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SRM_RS03335 e818042dac239727fef5454ca78b31bf 580 TIGRFAM TIGR01816 sdhA_forward: succinate dehydrogenase, flavoprotein subunit 4 580 2.2E-256 T 22-04-2016 IPR011281 Succinate dehydrogenase, flavoprotein subunit GO:0006099|GO:0016627|GO:0050660|GO:0055114 KEGG: 00020+1.3.5.1|KEGG: 00190+1.3.5.1|KEGG: 00650+1.3.5.1|KEGG: 00720+1.3.5.1|MetaCyc: PWY-3781|MetaCyc: PWY-4302|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7279 SRM_RS03335 e818042dac239727fef5454ca78b31bf 580 PANTHER PTHR11632 1 580 1.9E-304 T 22-04-2016 SRM_RS03335 e818042dac239727fef5454ca78b31bf 580 Gene3D G3DSA:3.50.50.60 3 239 3.7E-115 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SRM_RS03335 e818042dac239727fef5454ca78b31bf 580 Gene3D G3DSA:3.50.50.60 346 418 3.7E-115 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SRM_RS03335 e818042dac239727fef5454ca78b31bf 580 Gene3D G3DSA:1.20.58.100 443 550 1.2E-36 T 22-04-2016 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal GO:0016491|GO:0055114 SRM_RS03335 e818042dac239727fef5454ca78b31bf 580 Pfam PF02910 Fumarate reductase flavoprotein C-term 454 580 1.9E-42 T 22-04-2016 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal GO:0016491|GO:0055114 SRM_RS03335 e818042dac239727fef5454ca78b31bf 580 Gene3D G3DSA:4.10.80.40 551 576 4.8E-11 T 22-04-2016 SRM_RS03335 e818042dac239727fef5454ca78b31bf 580 Gene3D G3DSA:3.90.700.10 240 345 2.9E-40 T 22-04-2016 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain SRM_RS03335 e818042dac239727fef5454ca78b31bf 580 SUPERFAMILY SSF56425 233 350 1.2E-40 T 22-04-2016 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain SRM_RS03335 e818042dac239727fef5454ca78b31bf 580 Pfam PF00890 FAD binding domain 6 397 7.3E-114 T 22-04-2016 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain SRM_RS03335 e818042dac239727fef5454ca78b31bf 580 ProSitePatterns PS00504 Fumarate reductase / succinate dehydrogenase FAD-binding site. 40 49 - T 22-04-2016 IPR003952 Fumarate reductase/succinate dehydrogenase, FAD-binding site GO:0016491|GO:0055114 SRM_RS03335 e818042dac239727fef5454ca78b31bf 580 PIRSF PIRSF000171 1 575 3.3E-44 T 22-04-2016 IPR030664 Succinate dehydrogenase/fumarate reductase, alpha/adenylylsulphate reductase subunit SRM_RS03335 e818042dac239727fef5454ca78b31bf 580 SUPERFAMILY SSF46977 446 580 1.44E-48 T 22-04-2016 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal GO:0016491|GO:0055114 SRM_RS03335 e818042dac239727fef5454ca78b31bf 580 PANTHER PTHR11632:SF5 1 580 1.9E-304 T 22-04-2016 SRM_RS03335 e818042dac239727fef5454ca78b31bf 580 TIGRFAM TIGR01812 sdhA_frdA_Gneg: succinate dehydrogenase or fumarate reductase, flavoprotein subunit 6 580 2.0E-239 T 22-04-2016 IPR014006 Succinate dehydrogenase/fumarate reductase, flavoprotein subunit GO:0016627|GO:0022900|GO:0050660|GO:0055114 KEGG: 00020+1.3.5.1|KEGG: 00190+1.3.5.1|KEGG: 00650+1.3.5.1|KEGG: 00720+1.3.5.1|MetaCyc: PWY-3781|MetaCyc: PWY-4302|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7279 SRM_RS03335 e818042dac239727fef5454ca78b31bf 580 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 375 382 1.0E-6 T 22-04-2016 SRM_RS03335 e818042dac239727fef5454ca78b31bf 580 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 6 28 1.0E-6 T 22-04-2016 SRM_RS08640 4f0103e583e79eedff71098d35bd83e4 337 Pfam PF00586 AIR synthase related protein, N-terminal domain 57 160 5.5E-15 T 22-04-2016 IPR016188 PurM-like, N-terminal domain SRM_RS08640 4f0103e583e79eedff71098d35bd83e4 337 PANTHER PTHR10520 1 330 9.1E-141 T 22-04-2016 SRM_RS08640 4f0103e583e79eedff71098d35bd83e4 337 Pfam PF02769 AIR synthase related protein, C-terminal domain 172 333 1.8E-22 T 22-04-2016 IPR010918 AIR synthase-related protein, C-terminal domain SRM_RS08640 4f0103e583e79eedff71098d35bd83e4 337 SUPERFAMILY SSF56042 167 333 1.41E-47 T 22-04-2016 IPR010918 AIR synthase-related protein, C-terminal domain SRM_RS08640 4f0103e583e79eedff71098d35bd83e4 337 Hamap MF_00741 Phosphoribosylformylglycinamidine cyclo-ligase [purM]. 2 335 39.719 T 22-04-2016 IPR004733 Phosphoribosylformylglycinamidine cyclo-ligase GO:0004641|GO:0005737|GO:0006189 KEGG: 00230+6.3.3.1|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|UniPathway: UPA00074 SRM_RS08640 4f0103e583e79eedff71098d35bd83e4 337 Gene3D G3DSA:3.30.1330.10 18 165 3.1E-49 T 22-04-2016 IPR016188 PurM-like, N-terminal domain SRM_RS08640 4f0103e583e79eedff71098d35bd83e4 337 SUPERFAMILY SSF55326 2 165 3.89E-43 T 22-04-2016 SRM_RS08640 4f0103e583e79eedff71098d35bd83e4 337 TIGRFAM TIGR00878 purM: phosphoribosylformylglycinamidine cyclo-ligase 3 331 2.4E-110 T 22-04-2016 IPR004733 Phosphoribosylformylglycinamidine cyclo-ligase GO:0004641|GO:0005737|GO:0006189 KEGG: 00230+6.3.3.1|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|UniPathway: UPA00074 SRM_RS08640 4f0103e583e79eedff71098d35bd83e4 337 Gene3D G3DSA:3.90.650.10 168 333 8.4E-53 T 22-04-2016 IPR010918 AIR synthase-related protein, C-terminal domain SRM_RS05800 d0e8b99904b77e0717f27e52c2792f25 302 Pfam PF00801 PKD domain 108 173 1.0E-15 T 22-04-2016 IPR000601 PKD domain SRM_RS05800 d0e8b99904b77e0717f27e52c2792f25 302 Pfam PF00801 PKD domain 23 87 9.7E-11 T 22-04-2016 IPR000601 PKD domain SRM_RS05800 d0e8b99904b77e0717f27e52c2792f25 302 SUPERFAMILY SSF49299 14 99 3.27E-15 T 22-04-2016 IPR000601 PKD domain SRM_RS05800 d0e8b99904b77e0717f27e52c2792f25 302 Pfam PF00691 OmpA family 198 287 1.7E-17 T 22-04-2016 IPR006665 OmpA-like domain SRM_RS05800 d0e8b99904b77e0717f27e52c2792f25 302 Gene3D G3DSA:3.30.1330.60 195 283 7.9E-16 T 22-04-2016 IPR006665 OmpA-like domain SRM_RS05800 d0e8b99904b77e0717f27e52c2792f25 302 SUPERFAMILY SSF103088 179 282 4.45E-15 T 22-04-2016 IPR006665 OmpA-like domain SRM_RS05800 d0e8b99904b77e0717f27e52c2792f25 302 Gene3D G3DSA:2.60.40.670 21 95 6.1E-16 T 22-04-2016 IPR000601 PKD domain SRM_RS05800 d0e8b99904b77e0717f27e52c2792f25 302 Gene3D G3DSA:2.60.40.670 107 180 1.2E-23 T 22-04-2016 IPR000601 PKD domain SRM_RS05800 d0e8b99904b77e0717f27e52c2792f25 302 SMART SM00089 106 183 2.1E-21 T 22-04-2016 IPR022409 PKD/Chitinase domain SRM_RS05800 d0e8b99904b77e0717f27e52c2792f25 302 SMART SM00089 17 98 6.4E-10 T 22-04-2016 IPR022409 PKD/Chitinase domain SRM_RS05800 d0e8b99904b77e0717f27e52c2792f25 302 SUPERFAMILY SSF49299 96 182 2.09E-22 T 22-04-2016 IPR000601 PKD domain SRM_RS05800 d0e8b99904b77e0717f27e52c2792f25 302 PANTHER PTHR10877 10 199 5.1E-13 T 22-04-2016 SRM_RS13155 93ba150814f31ea55fe08c6477830360 335 PANTHER PTHR22855:SF42 1 326 9.9E-115 T 22-04-2016 SRM_RS13155 93ba150814f31ea55fe08c6477830360 335 Gene3D G3DSA:3.90.226.10 57 279 3.0E-44 T 22-04-2016 IPR029045 ClpP/crotonase-like domain SRM_RS13155 93ba150814f31ea55fe08c6477830360 335 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 90 101 1.4E-5 T 22-04-2016 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 SRM_RS13155 93ba150814f31ea55fe08c6477830360 335 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 206 215 1.4E-5 T 22-04-2016 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 SRM_RS13155 93ba150814f31ea55fe08c6477830360 335 SUPERFAMILY SSF52096 8 325 1.41E-94 T 22-04-2016 IPR029045 ClpP/crotonase-like domain SRM_RS13155 93ba150814f31ea55fe08c6477830360 335 PANTHER PTHR22855 1 326 9.9E-115 T 22-04-2016 SRM_RS13155 93ba150814f31ea55fe08c6477830360 335 TIGRFAM TIGR00513 accA: acetyl-CoA carboxylase, carboxyl transferase, alpha subunit 6 325 1.2E-128 T 22-04-2016 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 SRM_RS13155 93ba150814f31ea55fe08c6477830360 335 Pfam PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit 8 156 9.5E-62 T 22-04-2016 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 SRM_RS13155 93ba150814f31ea55fe08c6477830360 335 Hamap MF_00823 Acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha [accA]. 7 325 47.895 T 22-04-2016 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 SRM_RS10165 75d48d34b5fe65b4b381468c7f47dbab 185 SMART SM00738 7 117 8.6E-26 T 22-04-2016 IPR006645 NusG, N-terminal GO:0006355 SRM_RS10165 75d48d34b5fe65b4b381468c7f47dbab 185 Pfam PF02357 Transcription termination factor nusG 9 114 3.3E-21 T 22-04-2016 IPR006645 NusG, N-terminal GO:0006355 SRM_RS10165 75d48d34b5fe65b4b381468c7f47dbab 185 ProSitePatterns PS01014 Transcription termination factor nusG signature. 167 176 - T 22-04-2016 IPR015869 Transcription antitermination protein, NusG, bacteria, conserved site SRM_RS10165 75d48d34b5fe65b4b381468c7f47dbab 185 Hamap MF_00948 Transcription termination/antitermination protein NusG [nusG]. 7 184 21.549 T 22-04-2016 IPR001062 Transcription antitermination protein, NusG GO:0032784 SRM_RS10165 75d48d34b5fe65b4b381468c7f47dbab 185 Gene3D G3DSA:2.30.30.30 126 182 1.5E-25 T 22-04-2016 IPR014722 Ribosomal protein L2 domain 2 SRM_RS10165 75d48d34b5fe65b4b381468c7f47dbab 185 TIGRFAM TIGR00922 nusG: transcription termination/antitermination factor NusG 10 183 4.6E-53 T 22-04-2016 IPR001062 Transcription antitermination protein, NusG GO:0032784 SRM_RS10165 75d48d34b5fe65b4b381468c7f47dbab 185 PANTHER PTHR30265 10 182 4.2E-56 T 22-04-2016 SRM_RS10165 75d48d34b5fe65b4b381468c7f47dbab 185 SUPERFAMILY SSF50104 110 183 3.27E-18 T 22-04-2016 IPR008991 Translation protein SH3-like domain SRM_RS10165 75d48d34b5fe65b4b381468c7f47dbab 185 Gene3D G3DSA:3.30.70.940 9 119 2.1E-32 T 22-04-2016 IPR006645 NusG, N-terminal GO:0006355 SRM_RS10165 75d48d34b5fe65b4b381468c7f47dbab 185 SMART SM00739 130 157 1.2E-5 T 22-04-2016 IPR005824 KOW SRM_RS10165 75d48d34b5fe65b4b381468c7f47dbab 185 PRINTS PR00338 Transcription termination factor NUSG signature 160 176 7.6E-17 T 22-04-2016 IPR001062 Transcription antitermination protein, NusG GO:0032784 SRM_RS10165 75d48d34b5fe65b4b381468c7f47dbab 185 PRINTS PR00338 Transcription termination factor NUSG signature 142 157 7.6E-17 T 22-04-2016 IPR001062 Transcription antitermination protein, NusG GO:0032784 SRM_RS10165 75d48d34b5fe65b4b381468c7f47dbab 185 PRINTS PR00338 Transcription termination factor NUSG signature 62 74 7.6E-17 T 22-04-2016 IPR001062 Transcription antitermination protein, NusG GO:0032784 SRM_RS10165 75d48d34b5fe65b4b381468c7f47dbab 185 SUPERFAMILY SSF82679 9 118 7.19E-30 T 22-04-2016 IPR006645 NusG, N-terminal GO:0006355 SRM_RS10225 b1b1771c3e1bf9a6249e58a474cc325f 311 Pfam PF01687 Riboflavin kinase 183 306 1.5E-37 T 22-04-2016 IPR015865 Riboflavin kinase domain, bacterial/eukaryotic GO:0008531|GO:0009231 SRM_RS10225 b1b1771c3e1bf9a6249e58a474cc325f 311 TIGRFAM TIGR00083 ribF: riboflavin biosynthesis protein RibF 18 305 2.3E-76 T 22-04-2016 IPR002606 Riboflavin kinase, bacterial GO:0003919|GO:0008531|GO:0009231 KEGG: 00740+2.7.1.26+2.7.7.2|MetaCyc: PWY-5523|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00276|UniPathway: UPA00277 SRM_RS10225 b1b1771c3e1bf9a6249e58a474cc325f 311 PANTHER PTHR22749:SF0 1 310 7.8E-117 T 22-04-2016 SRM_RS10225 b1b1771c3e1bf9a6249e58a474cc325f 311 SUPERFAMILY SSF82114 172 308 1.55E-41 T 22-04-2016 IPR015865 Riboflavin kinase domain, bacterial/eukaryotic GO:0008531|GO:0009231 SRM_RS10225 b1b1771c3e1bf9a6249e58a474cc325f 311 PIRSF PIRSF004491 1 311 2.3E-101 T 22-04-2016 IPR002606 Riboflavin kinase, bacterial GO:0003919|GO:0008531|GO:0009231 KEGG: 00740+2.7.1.26+2.7.7.2|MetaCyc: PWY-5523|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00276|UniPathway: UPA00277 SRM_RS10225 b1b1771c3e1bf9a6249e58a474cc325f 311 SMART SM00904 182 308 1.5E-55 T 22-04-2016 IPR015865 Riboflavin kinase domain, bacterial/eukaryotic GO:0008531|GO:0009231 SRM_RS10225 b1b1771c3e1bf9a6249e58a474cc325f 311 Gene3D G3DSA:2.40.30.30 179 309 6.2E-42 T 22-04-2016 IPR023465 Riboflavin kinase domain GO:0008531|GO:0009231 SRM_RS10225 b1b1771c3e1bf9a6249e58a474cc325f 311 SUPERFAMILY SSF52374 16 175 3.22E-36 T 22-04-2016 SRM_RS10225 b1b1771c3e1bf9a6249e58a474cc325f 311 Gene3D G3DSA:3.40.50.620 8 178 1.8E-58 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold SRM_RS10225 b1b1771c3e1bf9a6249e58a474cc325f 311 PANTHER PTHR22749 1 310 7.8E-117 T 22-04-2016 IPR023468 Riboflavin kinase KEGG: 00740+2.7.1.26|MetaCyc: PWY-5523|MetaCyc: PWY-6168|UniPathway: UPA00276 SRM_RS10225 b1b1771c3e1bf9a6249e58a474cc325f 311 Pfam PF06574 FAD synthetase 12 164 2.3E-48 T 22-04-2016 IPR015864 FAD synthetase GO:0003919|GO:0009231 KEGG: 00740+2.7.1.26+2.7.7.2|MetaCyc: PWY-5523|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00276|UniPathway: UPA00277 SRM_RS06530 76ef681d745bf707ab12d629091a2ea6 123 PANTHER PTHR12903 5 122 4.9E-22 T 22-04-2016 SRM_RS06530 76ef681d745bf707ab12d629091a2ea6 123 Hamap MF_01326_B 50S ribosomal protein L24 [rplX]. 6 115 17.403 T 22-04-2016 IPR003256 Ribosomal protein L24 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SRM_RS06530 76ef681d745bf707ab12d629091a2ea6 123 TIGRFAM TIGR01079 rplX_bact: ribosomal protein uL24 6 120 1.1E-22 T 22-04-2016 IPR003256 Ribosomal protein L24 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SRM_RS06530 76ef681d745bf707ab12d629091a2ea6 123 Pfam PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 53 120 3.3E-17 T 22-04-2016 IPR003256 Ribosomal protein L24 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SRM_RS06530 76ef681d745bf707ab12d629091a2ea6 123 SUPERFAMILY SSF50104 4 119 5.72E-19 T 22-04-2016 IPR008991 Translation protein SH3-like domain SRM_RS06530 76ef681d745bf707ab12d629091a2ea6 123 Gene3D G3DSA:2.30.30.30 3 102 3.2E-12 T 22-04-2016 IPR014722 Ribosomal protein L2 domain 2 SRM_RS13990 2aa9835d35cf6ccc3591cb1674ba455d 160 PANTHER PTHR11911 3 157 1.1E-27 T 22-04-2016 SRM_RS13990 2aa9835d35cf6ccc3591cb1674ba455d 160 SUPERFAMILY SSF54631 9 153 6.44E-30 T 22-04-2016 SRM_RS13990 2aa9835d35cf6ccc3591cb1674ba455d 160 Gene3D G3DSA:3.10.580.10 23 140 1.7E-31 T 22-04-2016 SRM_RS13990 2aa9835d35cf6ccc3591cb1674ba455d 160 SMART SM00116 26 73 4.8E-5 T 22-04-2016 IPR000644 CBS domain SRM_RS13990 2aa9835d35cf6ccc3591cb1674ba455d 160 SMART SM00116 91 139 1.7E-6 T 22-04-2016 IPR000644 CBS domain SRM_RS13990 2aa9835d35cf6ccc3591cb1674ba455d 160 Pfam PF00571 CBS domain 84 136 1.7E-11 T 22-04-2016 IPR000644 CBS domain SRM_RS13990 2aa9835d35cf6ccc3591cb1674ba455d 160 Pfam PF00571 CBS domain 17 70 3.9E-9 T 22-04-2016 IPR000644 CBS domain SRM_RS03495 d4e5d5663a0704aedef211a35197da61 437 PANTHER PTHR13693 56 426 5.7E-154 T 22-04-2016 SRM_RS03495 d4e5d5663a0704aedef211a35197da61 437 Pfam PF00155 Aminotransferase class I and II 77 415 2.6E-62 T 22-04-2016 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 SRM_RS03495 d4e5d5663a0704aedef211a35197da61 437 Gene3D G3DSA:3.40.640.10 89 308 5.6E-84 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 SRM_RS03495 d4e5d5663a0704aedef211a35197da61 437 Gene3D G3DSA:3.90.1150.10 309 422 3.7E-30 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 SRM_RS03495 d4e5d5663a0704aedef211a35197da61 437 SUPERFAMILY SSF53383 42 425 2.92E-112 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase SRM_RS03495 d4e5d5663a0704aedef211a35197da61 437 ProSitePatterns PS00599 Aminotransferases class-II pyridoxal-phosphate attachment site. 271 280 - T 22-04-2016 IPR001917 Aminotransferase, class-II, pyridoxal-phosphate binding site GO:0008152|GO:0016740 SRM_RS08160 2960fc64f1bc21cb2a62b2e12482981d 531 Gene3D G3DSA:1.10.10.60 464 517 4.9E-14 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 SRM_RS08160 2960fc64f1bc21cb2a62b2e12482981d 531 SUPERFAMILY SSF52540 201 441 2.77E-45 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SRM_RS08160 2960fc64f1bc21cb2a62b2e12482981d 531 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 408 417 - T 22-04-2016 IPR025944 Sigma-54 interaction domain, conserved site SRM_RS08160 2960fc64f1bc21cb2a62b2e12482981d 531 Pfam PF02954 Bacterial regulatory protein, Fis family 474 514 7.0E-10 T 22-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 SRM_RS08160 2960fc64f1bc21cb2a62b2e12482981d 531 Gene3D G3DSA:1.10.8.60 369 447 2.8E-21 T 22-04-2016 SRM_RS08160 2960fc64f1bc21cb2a62b2e12482981d 531 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 224 237 - T 22-04-2016 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 SRM_RS08160 2960fc64f1bc21cb2a62b2e12482981d 531 Pfam PF00158 Sigma-54 interaction domain 201 362 1.7E-32 T 22-04-2016 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 SRM_RS08160 2960fc64f1bc21cb2a62b2e12482981d 531 PANTHER PTHR32071 195 527 6.0E-91 T 22-04-2016 SRM_RS08160 2960fc64f1bc21cb2a62b2e12482981d 531 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 480 497 8.6E-7 T 22-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 SRM_RS08160 2960fc64f1bc21cb2a62b2e12482981d 531 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 497 517 8.6E-7 T 22-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 SRM_RS08160 2960fc64f1bc21cb2a62b2e12482981d 531 PANTHER PTHR32071:SF16 195 527 6.0E-91 T 22-04-2016 SRM_RS08160 2960fc64f1bc21cb2a62b2e12482981d 531 Gene3D G3DSA:3.40.50.300 198 368 4.1E-41 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SRM_RS08160 2960fc64f1bc21cb2a62b2e12482981d 531 SUPERFAMILY SSF46689 408 517 4.35E-11 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 SRM_RS07595 b1cb4a6d40732a540a9e31e405f27ba3 331 PANTHER PTHR10314:SF36 12 327 9.1E-136 T 22-04-2016 SRM_RS07595 b1cb4a6d40732a540a9e31e405f27ba3 331 SUPERFAMILY SSF53686 13 320 1.57E-95 T 22-04-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme SRM_RS07595 b1cb4a6d40732a540a9e31e405f27ba3 331 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 27 313 3.0E-77 T 22-04-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme SRM_RS07595 b1cb4a6d40732a540a9e31e405f27ba3 331 PANTHER PTHR10314 12 327 9.1E-136 T 22-04-2016 SRM_RS07595 b1cb4a6d40732a540a9e31e405f27ba3 331 ProSitePatterns PS00165 Serine/threonine dehydratases pyridoxal-phosphate attachment site. 52 65 - T 22-04-2016 IPR000634 Serine/threonine dehydratase, pyridoxal-phosphate-binding site GO:0006520|GO:0030170 SRM_RS07595 b1cb4a6d40732a540a9e31e405f27ba3 331 Gene3D G3DSA:3.40.50.1100 80 327 1.8E-77 T 22-04-2016 SRM_RS11530 620c3ba3d1aacfedf391338134197d07 590 SUPERFAMILY SSF50939 239 417 5.49E-10 T 22-04-2016 IPR011040 Sialidases SRM_RS11530 620c3ba3d1aacfedf391338134197d07 590 Gene3D G3DSA:2.120.10.10 273 326 6.4E-5 T 22-04-2016 IPR011040 Sialidases SRM_RS11530 620c3ba3d1aacfedf391338134197d07 590 Gene3D G3DSA:2.120.10.10 339 422 2.6E-11 T 22-04-2016 IPR011040 Sialidases SRM_RS11530 620c3ba3d1aacfedf391338134197d07 590 Gene3D G3DSA:2.120.10.10 237 272 2.6E-11 T 22-04-2016 IPR011040 Sialidases SRM_RS08785 742bd1d1861773b3d896a6b1f845dfa9 360 PANTHER PTHR30349 298 344 4.6E-48 T 22-04-2016 SRM_RS08785 742bd1d1861773b3d896a6b1f845dfa9 360 PANTHER PTHR30349 55 275 4.6E-48 T 22-04-2016 SRM_RS08785 742bd1d1861773b3d896a6b1f845dfa9 360 Pfam PF00589 Phage integrase family 142 343 8.7E-24 T 22-04-2016 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 SRM_RS08785 742bd1d1861773b3d896a6b1f845dfa9 360 Pfam PF13495 Phage integrase, N-terminal SAM-like domain 56 119 4.9E-7 T 22-04-2016 IPR004107 Integrase, SAM-like, N-terminal GO:0003677|GO:0015074 SRM_RS08785 742bd1d1861773b3d896a6b1f845dfa9 360 Gene3D G3DSA:1.10.443.10 147 346 7.9E-39 T 22-04-2016 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 SRM_RS08785 742bd1d1861773b3d896a6b1f845dfa9 360 SUPERFAMILY SSF56349 51 344 1.06E-43 T 22-04-2016 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 SRM_RS08785 742bd1d1861773b3d896a6b1f845dfa9 360 Gene3D G3DSA:1.10.150.130 58 132 2.0E-11 T 22-04-2016 IPR023109 Integrase/recombinase, N-terminal SRM_RS08785 742bd1d1861773b3d896a6b1f845dfa9 360 PANTHER PTHR30349:SF5 298 344 4.6E-48 T 22-04-2016 SRM_RS08785 742bd1d1861773b3d896a6b1f845dfa9 360 PANTHER PTHR30349:SF5 55 275 4.6E-48 T 22-04-2016 SRM_RS08325 774054898b93289e1e90f328c68e7b58 691 Pfam PF13145 PPIC-type PPIASE domain 473 551 3.5E-7 T 22-04-2016 IPR000297 Peptidyl-prolyl cis-trans isomerase, PpiC-type GO:0016853 SRM_RS08325 774054898b93289e1e90f328c68e7b58 691 Pfam PF13145 PPIC-type PPIASE domain 217 338 4.1E-8 T 22-04-2016 IPR000297 Peptidyl-prolyl cis-trans isomerase, PpiC-type GO:0016853 SRM_RS08325 774054898b93289e1e90f328c68e7b58 691 PANTHER PTHR10657 1 128 1.4E-36 T 22-04-2016 SRM_RS08325 774054898b93289e1e90f328c68e7b58 691 PANTHER PTHR10657 147 193 1.4E-36 T 22-04-2016 SRM_RS08325 774054898b93289e1e90f328c68e7b58 691 PANTHER PTHR10657 302 439 1.4E-36 T 22-04-2016 SRM_RS08325 774054898b93289e1e90f328c68e7b58 691 Gene3D G3DSA:3.10.50.40 508 562 2.0E-4 T 22-04-2016 SRM_RS08325 774054898b93289e1e90f328c68e7b58 691 Gene3D G3DSA:3.10.50.40 610 666 2.8E-4 T 22-04-2016 SRM_RS08325 774054898b93289e1e90f328c68e7b58 691 Gene3D G3DSA:3.10.50.40 341 440 3.3E-32 T 22-04-2016 SRM_RS08325 774054898b93289e1e90f328c68e7b58 691 SUPERFAMILY SSF109998 41 202 6.8E-22 T 22-04-2016 IPR027304 Trigger factor/SurA domain SRM_RS08325 774054898b93289e1e90f328c68e7b58 691 Pfam PF00639 PPIC-type PPIASE domain 345 434 5.7E-24 T 22-04-2016 IPR000297 Peptidyl-prolyl cis-trans isomerase, PpiC-type GO:0016853 SRM_RS08325 774054898b93289e1e90f328c68e7b58 691 SUPERFAMILY SSF54534 337 434 2.42E-27 T 22-04-2016 SRM_RS08325 774054898b93289e1e90f328c68e7b58 691 Pfam PF13623 SurA N-terminal domain 4 146 4.8E-31 T 22-04-2016 SRM_RS12690 4b121e2d8136a3e16f92ffa5d63b6be7 937 Gene3D G3DSA:2.40.170.20 421 936 4.9E-15 T 22-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 SRM_RS12690 4b121e2d8136a3e16f92ffa5d63b6be7 937 SMART SM00965 75 126 0.0024 T 22-04-2016 IPR011662 Secretin/TonB, short N-terminal domain GO:0019867 SRM_RS12690 4b121e2d8136a3e16f92ffa5d63b6be7 937 Gene3D G3DSA:2.60.40.1120 136 227 8.1E-17 T 22-04-2016 IPR014766 Carboxypeptidase, regulatory domain SRM_RS12690 4b121e2d8136a3e16f92ffa5d63b6be7 937 PANTHER PTHR30069 98 328 5.4E-19 T 22-04-2016 SRM_RS12690 4b121e2d8136a3e16f92ffa5d63b6be7 937 SUPERFAMILY SSF49464 136 224 1.51E-16 T 22-04-2016 IPR008969 Carboxypeptidase-like, regulatory domain SRM_RS12690 4b121e2d8136a3e16f92ffa5d63b6be7 937 SUPERFAMILY SSF56935 428 937 1.28E-30 T 22-04-2016 SRM_RS12690 4b121e2d8136a3e16f92ffa5d63b6be7 937 SUPERFAMILY SSF56935 219 396 1.28E-30 T 22-04-2016 SRM_RS12690 4b121e2d8136a3e16f92ffa5d63b6be7 937 Pfam PF13715 CarboxypepD_reg-like domain 136 223 1.2E-17 T 22-04-2016 SRM_RS07195 08e90f6f1dc887a92d8c5036b9400e7b 137 Pfam PF03965 Penicillinase repressor 9 122 6.7E-32 T 22-04-2016 IPR005650 BlaI transcriptional regulatory family GO:0003677|GO:0045892 SRM_RS07195 08e90f6f1dc887a92d8c5036b9400e7b 137 PANTHER PTHR34134:SF1 1 133 1.0E-34 T 22-04-2016 SRM_RS07195 08e90f6f1dc887a92d8c5036b9400e7b 137 Gene3D G3DSA:1.10.10.10 5 80 3.0E-23 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SRM_RS07195 08e90f6f1dc887a92d8c5036b9400e7b 137 PIRSF PIRSF019455 1 133 9.2E-33 T 22-04-2016 IPR005650 BlaI transcriptional regulatory family GO:0003677|GO:0045892 SRM_RS07195 08e90f6f1dc887a92d8c5036b9400e7b 137 PANTHER PTHR34134 1 133 1.0E-34 T 22-04-2016 SRM_RS07195 08e90f6f1dc887a92d8c5036b9400e7b 137 SUPERFAMILY SSF46785 8 125 7.15E-29 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SRM_RS11330 7cfcf09e6ed842ac708bcbe236ee87ed 314 SUPERFAMILY SSF52402 4 151 7.45E-33 T 22-04-2016 SRM_RS11330 7cfcf09e6ed842ac708bcbe236ee87ed 314 Gene3D G3DSA:3.40.50.620 154 295 3.3E-34 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold SRM_RS11330 7cfcf09e6ed842ac708bcbe236ee87ed 314 PRINTS PR01438 Universal stress protein signature 4 22 2.5E-17 T 22-04-2016 IPR006015 Universal stress protein A SRM_RS11330 7cfcf09e6ed842ac708bcbe236ee87ed 314 PRINTS PR01438 Universal stress protein signature 106 118 2.5E-17 T 22-04-2016 IPR006015 Universal stress protein A SRM_RS11330 7cfcf09e6ed842ac708bcbe236ee87ed 314 PRINTS PR01438 Universal stress protein signature 124 146 2.5E-17 T 22-04-2016 IPR006015 Universal stress protein A SRM_RS11330 7cfcf09e6ed842ac708bcbe236ee87ed 314 SUPERFAMILY SSF52402 158 297 1.26E-33 T 22-04-2016 SRM_RS11330 7cfcf09e6ed842ac708bcbe236ee87ed 314 Pfam PF00582 Universal stress protein family 4 146 2.2E-29 T 22-04-2016 IPR006016 UspA GO:0006950 SRM_RS11330 7cfcf09e6ed842ac708bcbe236ee87ed 314 Pfam PF00582 Universal stress protein family 158 295 1.2E-31 T 22-04-2016 IPR006016 UspA GO:0006950 SRM_RS11330 7cfcf09e6ed842ac708bcbe236ee87ed 314 PANTHER PTHR31964 142 301 9.0E-28 T 22-04-2016 SRM_RS11330 7cfcf09e6ed842ac708bcbe236ee87ed 314 Gene3D G3DSA:3.40.50.620 2 148 2.8E-34 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold SRM_RS03125 56da8930c78debf927393fd94876dd01 236 PANTHER PTHR10010:SF14 1 222 8.4E-56 T 22-04-2016 IPR028366 Phosphate transport system protein PhoU GO:0005737|GO:0030643|GO:0045936 SRM_RS03125 56da8930c78debf927393fd94876dd01 236 Pfam PF01895 PhoU domain 119 202 7.5E-20 T 22-04-2016 IPR026022 PhoU domain SRM_RS03125 56da8930c78debf927393fd94876dd01 236 Pfam PF01895 PhoU domain 16 101 2.3E-23 T 22-04-2016 IPR026022 PhoU domain SRM_RS03125 56da8930c78debf927393fd94876dd01 236 Gene3D G3DSA:1.20.58.220 3 108 5.1E-32 T 22-04-2016 SRM_RS03125 56da8930c78debf927393fd94876dd01 236 Gene3D G3DSA:1.20.58.220 118 221 2.2E-26 T 22-04-2016 SRM_RS03125 56da8930c78debf927393fd94876dd01 236 PANTHER PTHR10010 1 222 8.4E-56 T 22-04-2016 SRM_RS03125 56da8930c78debf927393fd94876dd01 236 SUPERFAMILY SSF109755 4 220 4.29E-64 T 22-04-2016 SRM_RS03125 56da8930c78debf927393fd94876dd01 236 PIRSF PIRSF003107 1 218 3.2E-57 T 22-04-2016 IPR028366 Phosphate transport system protein PhoU GO:0005737|GO:0030643|GO:0045936 SRM_RS03125 56da8930c78debf927393fd94876dd01 236 TIGRFAM TIGR02135 phoU_full: phosphate transport system regulatory protein PhoU 4 212 1.9E-59 T 22-04-2016 IPR028366 Phosphate transport system protein PhoU GO:0005737|GO:0030643|GO:0045936 SRM_RS04855 4de5c18e3b9cd6ed62a0eda61531746d 467 Pfam PF02321 Outer membrane efflux protein 277 461 1.5E-27 T 22-04-2016 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 SRM_RS04855 4de5c18e3b9cd6ed62a0eda61531746d 467 Pfam PF02321 Outer membrane efflux protein 55 249 1.3E-26 T 22-04-2016 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 SRM_RS04855 4de5c18e3b9cd6ed62a0eda61531746d 467 SUPERFAMILY SSF56954 20 465 1.01E-75 T 22-04-2016 SRM_RS04855 4de5c18e3b9cd6ed62a0eda61531746d 467 PANTHER PTHR30026 22 466 3.8E-48 T 22-04-2016 SRM_RS04855 4de5c18e3b9cd6ed62a0eda61531746d 467 Gene3D G3DSA:1.20.1600.10 47 464 7.4E-68 T 22-04-2016 SRM_RS04855 4de5c18e3b9cd6ed62a0eda61531746d 467 PANTHER PTHR30026:SF7 22 466 3.8E-48 T 22-04-2016 SRM_RS12715 db3bf23ccaf06a8aff706213e872d5f4 705 Pfam PF00999 Sodium/hydrogen exchanger family 60 447 2.6E-38 T 22-04-2016 IPR006153 Cation/H+ exchanger GO:0006812|GO:0015299|GO:0016021|GO:0055085 SRM_RS12715 db3bf23ccaf06a8aff706213e872d5f4 705 Pfam PF02254 TrkA-N domain 461 556 3.4E-9 T 22-04-2016 IPR003148 Regulator of K+ conductance, N-terminal GO:0006813 SRM_RS12715 db3bf23ccaf06a8aff706213e872d5f4 705 Gene3D G3DSA:3.40.50.720 459 556 1.1E-10 T 22-04-2016 IPR016040 NAD(P)-binding domain SRM_RS12715 db3bf23ccaf06a8aff706213e872d5f4 705 PANTHER PTHR32507:SF0 33 702 1.5E-148 T 22-04-2016 SRM_RS12715 db3bf23ccaf06a8aff706213e872d5f4 705 PANTHER PTHR32507 33 702 1.5E-148 T 22-04-2016 SRM_RS12715 db3bf23ccaf06a8aff706213e872d5f4 705 SUPERFAMILY SSF51735 459 554 6.43E-9 T 22-04-2016 IPR016040 NAD(P)-binding domain SRM_RS11100 1b5cb168efb2b04812646d6237a291c3 464 Pfam PF07521 Zn-dependent metallo-hydrolase RNA specificity domain 396 455 8.8E-16 T 22-04-2016 IPR011108 Zn-dependent metallo-hydrolase, RNA specificity domain SRM_RS11100 1b5cb168efb2b04812646d6237a291c3 464 Gene3D G3DSA:3.60.15.10 6 262 6.4E-29 T 22-04-2016 IPR001279 Metallo-beta-lactamase SRM_RS11100 1b5cb168efb2b04812646d6237a291c3 464 PANTHER PTHR11203:SF11 1 456 1.6E-71 T 22-04-2016 SRM_RS11100 1b5cb168efb2b04812646d6237a291c3 464 SUPERFAMILY SSF56281 1 463 3.29E-89 T 22-04-2016 IPR001279 Metallo-beta-lactamase SRM_RS11100 1b5cb168efb2b04812646d6237a291c3 464 SMART SM01027 255 374 5.8E-15 T 22-04-2016 IPR022712 Beta-Casp domain SRM_RS11100 1b5cb168efb2b04812646d6237a291c3 464 SMART SM00849 13 224 3.9E-8 T 22-04-2016 IPR001279 Metallo-beta-lactamase SRM_RS11100 1b5cb168efb2b04812646d6237a291c3 464 PANTHER PTHR11203 1 456 1.6E-71 T 22-04-2016 SRM_RS11100 1b5cb168efb2b04812646d6237a291c3 464 Pfam PF10996 Beta-Casp domain 255 374 2.5E-13 T 22-04-2016 IPR022712 Beta-Casp domain SRM_RS11150 29770ffc5fb303402e5f377a7d04b12e 573 PANTHER PTHR35093 379 573 4.0E-50 T 22-04-2016 SRM_RS11150 29770ffc5fb303402e5f377a7d04b12e 573 PANTHER PTHR35093 79 341 4.0E-50 T 22-04-2016 SRM_RS11150 29770ffc5fb303402e5f377a7d04b12e 573 SUPERFAMILY SSF56935 384 562 3.53E-55 T 22-04-2016 SRM_RS11150 29770ffc5fb303402e5f377a7d04b12e 573 SUPERFAMILY SSF56935 103 343 3.53E-55 T 22-04-2016 SRM_RS11150 29770ffc5fb303402e5f377a7d04b12e 573 PANTHER PTHR35093:SF2 379 573 4.0E-50 T 22-04-2016 SRM_RS11150 29770ffc5fb303402e5f377a7d04b12e 573 PANTHER PTHR35093:SF2 79 341 4.0E-50 T 22-04-2016 SRM_RS11150 29770ffc5fb303402e5f377a7d04b12e 573 Gene3D G3DSA:2.40.160.60 400 563 7.9E-104 T 22-04-2016 SRM_RS11150 29770ffc5fb303402e5f377a7d04b12e 573 Gene3D G3DSA:2.40.160.60 102 365 7.9E-104 T 22-04-2016 SRM_RS11150 29770ffc5fb303402e5f377a7d04b12e 573 Pfam PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) 98 536 1.7E-53 T 22-04-2016 IPR005017 Outer membrane protein transport protein (OMPP1/FadL/TodX) SRM_RS07005 c18269dd67af1fa6dcf6d10103126f20 84 PRINTS PR01249 Ribosomal protein L31 signature 2 19 3.0E-16 T 22-04-2016 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SRM_RS07005 c18269dd67af1fa6dcf6d10103126f20 84 PRINTS PR01249 Ribosomal protein L31 signature 47 65 3.0E-16 T 22-04-2016 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SRM_RS07005 c18269dd67af1fa6dcf6d10103126f20 84 PRINTS PR01249 Ribosomal protein L31 signature 32 47 3.0E-16 T 22-04-2016 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SRM_RS07005 c18269dd67af1fa6dcf6d10103126f20 84 Hamap MF_00501 50S ribosomal protein L31 [rpmE]. 1 69 24.62 T 22-04-2016 IPR027491 Ribosomal protein L31 type A GO:0003735|GO:0005622|GO:0005840|GO:0006412 SRM_RS07005 c18269dd67af1fa6dcf6d10103126f20 84 ProSitePatterns PS01143 Ribosomal protein L31 signature. 36 57 - T 22-04-2016 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SRM_RS07005 c18269dd67af1fa6dcf6d10103126f20 84 SUPERFAMILY SSF143800 1 67 3.14E-21 T 22-04-2016 SRM_RS07005 c18269dd67af1fa6dcf6d10103126f20 84 TIGRFAM TIGR00105 L31: ribosomal protein bL31 1 67 1.6E-27 T 22-04-2016 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SRM_RS07005 c18269dd67af1fa6dcf6d10103126f20 84 Pfam PF01197 Ribosomal protein L31 1 66 1.9E-26 T 22-04-2016 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SRM_RS07005 c18269dd67af1fa6dcf6d10103126f20 84 PANTHER PTHR33280 1 67 5.0E-27 T 22-04-2016 SRM_RS07545 4e33f41210f1ecc52be2989a05b82870 229 PANTHER PTHR12725 1 199 1.4E-44 T 22-04-2016 SRM_RS07545 4e33f41210f1ecc52be2989a05b82870 229 Pfam PF13419 Haloacid dehalogenase-like hydrolase 13 197 1.5E-11 T 22-04-2016 IPR023214 HAD-like domain SRM_RS07545 4e33f41210f1ecc52be2989a05b82870 229 SUPERFAMILY SSF56784 7 227 1.41E-42 T 22-04-2016 IPR023214 HAD-like domain SRM_RS07545 4e33f41210f1ecc52be2989a05b82870 229 PANTHER PTHR12725:SF62 1 199 1.4E-44 T 22-04-2016 SRM_RS07545 4e33f41210f1ecc52be2989a05b82870 229 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 140 156 6.2E-6 T 22-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 SRM_RS07545 4e33f41210f1ecc52be2989a05b82870 229 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 8 19 6.2E-6 T 22-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 SRM_RS07545 4e33f41210f1ecc52be2989a05b82870 229 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 158 178 6.2E-6 T 22-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 SRM_RS07545 4e33f41210f1ecc52be2989a05b82870 229 Gene3D G3DSA:3.40.50.1000 8 223 2.3E-33 T 22-04-2016 IPR023214 HAD-like domain SRM_RS07545 4e33f41210f1ecc52be2989a05b82870 229 TIGRFAM TIGR01493 HAD-SF-IA-v2: HAD hydrolase, family IA, variant 2 11 183 5.0E-17 T 22-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 SRM_RS07545 4e33f41210f1ecc52be2989a05b82870 229 TIGRFAM TIGR01428 HAD_type_II: haloacid dehalogenase, type II 10 201 2.8E-38 T 22-04-2016 IPR006328 Haloacid dehalogenase, type II GO:0008152|GO:0019120 KEGG: 00361+3.8.1.2|KEGG: 00625+3.8.1.2|MetaCyc: PWY-7425 SRM_RS04160 e4e21ad7d9c9d815dc70fedc7289c90b 68 Pfam PF05973 Phage derived protein Gp49-like (DUF891) 4 58 3.7E-15 T 22-04-2016 IPR009241 Toxin HigB-like SRM_RS07590 a6571e17854f535ace9508e06a2481c5 769 PIRSF PIRSF000382 1 769 0.0 T 22-04-2016 IPR006276 Cobalamin-independent methionine synthase GO:0003871|GO:0008270|GO:0009086 KEGG: 00270+2.1.1.14|KEGG: 00450+2.1.1.14|MetaCyc: PWY-5041|MetaCyc: PWY-6151|MetaCyc: PWY-6936|MetaCyc: PWY-702|UniPathway: UPA00051 SRM_RS07590 a6571e17854f535ace9508e06a2481c5 769 Hamap MF_00172 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [metE]. 2 766 36.815 T 22-04-2016 IPR006276 Cobalamin-independent methionine synthase GO:0003871|GO:0008270|GO:0009086 KEGG: 00270+2.1.1.14|KEGG: 00450+2.1.1.14|MetaCyc: PWY-5041|MetaCyc: PWY-6151|MetaCyc: PWY-6936|MetaCyc: PWY-702|UniPathway: UPA00051 SRM_RS07590 a6571e17854f535ace9508e06a2481c5 769 SUPERFAMILY SSF51726 404 765 6.8E-120 T 22-04-2016 SRM_RS07590 a6571e17854f535ace9508e06a2481c5 769 TIGRFAM TIGR01371 met_syn_B12ind: 5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase 7 765 0.0 T 22-04-2016 IPR006276 Cobalamin-independent methionine synthase GO:0003871|GO:0008270|GO:0009086 KEGG: 00270+2.1.1.14|KEGG: 00450+2.1.1.14|MetaCyc: PWY-5041|MetaCyc: PWY-6151|MetaCyc: PWY-6936|MetaCyc: PWY-702|UniPathway: UPA00051 SRM_RS07590 a6571e17854f535ace9508e06a2481c5 769 PANTHER PTHR30519 1 769 0.0 T 22-04-2016 SRM_RS07590 a6571e17854f535ace9508e06a2481c5 769 Pfam PF01717 Cobalamin-independent synthase, Catalytic domain 439 762 5.1E-151 T 22-04-2016 IPR002629 Cobalamin-independent methionine synthase MetE, C-terminal/archaeal GO:0003871|GO:0008270|GO:0009086 KEGG: 00270+2.1.1.14|KEGG: 00450+2.1.1.14|MetaCyc: PWY-5041|MetaCyc: PWY-6151|MetaCyc: PWY-6936|MetaCyc: PWY-702|UniPathway: UPA00051 SRM_RS07590 a6571e17854f535ace9508e06a2481c5 769 Gene3D G3DSA:3.20.20.210 3 397 5.4E-152 T 22-04-2016 SRM_RS07590 a6571e17854f535ace9508e06a2481c5 769 Pfam PF08267 Cobalamin-independent synthase, N-terminal domain 4 318 1.1E-121 T 22-04-2016 IPR013215 Cobalamin-independent methionine synthase MetE, N-terminal GO:0003871|GO:0008270|GO:0008652 KEGG: 00270+2.1.1.14|KEGG: 00450+2.1.1.14|MetaCyc: PWY-5041|MetaCyc: PWY-6151|MetaCyc: PWY-6936|MetaCyc: PWY-702|UniPathway: UPA00051 SRM_RS07590 a6571e17854f535ace9508e06a2481c5 769 Gene3D G3DSA:3.20.20.210 401 766 1.3E-129 T 22-04-2016 SRM_RS07590 a6571e17854f535ace9508e06a2481c5 769 SUPERFAMILY SSF51726 4 402 1.44E-118 T 22-04-2016 SRM_RS07590 a6571e17854f535ace9508e06a2481c5 769 PANTHER PTHR30519:SF0 1 769 0.0 T 22-04-2016 SRM_RS10720 5a0aafb163fc311541a7f614b33f8188 628 SUPERFAMILY SSF47831 62 174 2.22E-18 T 22-04-2016 IPR008731 Phosphotransferase system, enzyme I N-terminal GO:0009401 SRM_RS10720 5a0aafb163fc311541a7f614b33f8188 628 TIGRFAM TIGR01417 PTS_I_fam: phosphoenolpyruvate-protein phosphotransferase 35 597 8.5E-128 T 22-04-2016 IPR006318 Phosphotransferase system, enzyme I-like GO:0016772 SRM_RS10720 5a0aafb163fc311541a7f614b33f8188 628 SUPERFAMILY SSF51621 289 576 4.71E-81 T 22-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 SRM_RS10720 5a0aafb163fc311541a7f614b33f8188 628 PANTHER PTHR22931 52 585 4.0E-131 T 22-04-2016 SRM_RS10720 5a0aafb163fc311541a7f614b33f8188 628 Pfam PF02896 PEP-utilising enzyme, TIM barrel domain 284 574 5.9E-81 T 22-04-2016 IPR000121 PEP-utilising enzyme, C-terminal GO:0016310|GO:0016772 SRM_RS10720 5a0aafb163fc311541a7f614b33f8188 628 PIRSF PIRSF000732 30 609 4.1E-186 T 22-04-2016 IPR024692 Phosphotransferase system, enzyme I GO:0008965|GO:0009401 SRM_RS10720 5a0aafb163fc311541a7f614b33f8188 628 Pfam PF00391 PEP-utilising enzyme, mobile domain 186 256 1.5E-18 T 22-04-2016 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 SRM_RS10720 5a0aafb163fc311541a7f614b33f8188 628 Gene3D G3DSA:3.50.30.10 166 277 1.8E-30 T 22-04-2016 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 SRM_RS10720 5a0aafb163fc311541a7f614b33f8188 628 PANTHER PTHR22931:SF28 52 585 4.0E-131 T 22-04-2016 SRM_RS10720 5a0aafb163fc311541a7f614b33f8188 628 Gene3D G3DSA:3.20.20.60 291 602 1.6E-83 T 22-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 SRM_RS10720 5a0aafb163fc311541a7f614b33f8188 628 Gene3D G3DSA:1.10.274.10 61 165 1.0E-19 T 22-04-2016 IPR008731 Phosphotransferase system, enzyme I N-terminal GO:0009401 SRM_RS10720 5a0aafb163fc311541a7f614b33f8188 628 Pfam PF05524 PEP-utilising enzyme, N-terminal 36 157 2.2E-20 T 22-04-2016 IPR008731 Phosphotransferase system, enzyme I N-terminal GO:0009401 SRM_RS10720 5a0aafb163fc311541a7f614b33f8188 628 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 324 343 1.6E-16 T 22-04-2016 SRM_RS10720 5a0aafb163fc311541a7f614b33f8188 628 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 482 497 1.6E-16 T 22-04-2016 SRM_RS10720 5a0aafb163fc311541a7f614b33f8188 628 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 535 547 1.6E-16 T 22-04-2016 SRM_RS10720 5a0aafb163fc311541a7f614b33f8188 628 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 499 514 1.6E-16 T 22-04-2016 SRM_RS10720 5a0aafb163fc311541a7f614b33f8188 628 ProSitePatterns PS00742 PEP-utilizing enzymes signature 2. 482 500 - T 22-04-2016 IPR023151 PEP-utilising enzyme, conserved site GO:0016772 SRM_RS10720 5a0aafb163fc311541a7f614b33f8188 628 SUPERFAMILY SSF52009 161 274 6.41E-25 T 22-04-2016 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 SRM_RS00935 53143a1e4511492429b0ff64ce7b25b0 338 Pfam PF02504 Fatty acid synthesis protein 5 326 2.8E-100 T 22-04-2016 IPR003664 Fatty acid synthesis PlsX protein GO:0003824|GO:0006633|GO:0016747 UniPathway: UPA00085 SRM_RS00935 53143a1e4511492429b0ff64ce7b25b0 338 SUPERFAMILY SSF53659 5 334 1.03E-86 T 22-04-2016 SRM_RS00935 53143a1e4511492429b0ff64ce7b25b0 338 TIGRFAM TIGR00182 plsX: fatty acid/phospholipid synthesis protein PlsX 5 335 1.6E-95 T 22-04-2016 IPR012281 Phospholipid biosynthesis protein, PlsX-like GO:0006633 UniPathway: UPA00085 SRM_RS00935 53143a1e4511492429b0ff64ce7b25b0 338 PANTHER PTHR30100:SF1 2 334 3.6E-109 T 22-04-2016 SRM_RS00935 53143a1e4511492429b0ff64ce7b25b0 338 PANTHER PTHR30100 2 334 3.6E-109 T 22-04-2016 SRM_RS00935 53143a1e4511492429b0ff64ce7b25b0 338 Gene3D G3DSA:3.40.718.10 4 335 2.3E-117 T 22-04-2016 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 SRM_RS00935 53143a1e4511492429b0ff64ce7b25b0 338 Hamap MF_00019 Phosphate acyltransferase [plsX]. 1 338 122.668 T 22-04-2016 IPR012281 Phospholipid biosynthesis protein, PlsX-like GO:0006633 UniPathway: UPA00085 SRM_RS00935 53143a1e4511492429b0ff64ce7b25b0 338 PIRSF PIRSF002465 2 338 1.2E-113 T 22-04-2016 IPR012281 Phospholipid biosynthesis protein, PlsX-like GO:0006633 UniPathway: UPA00085 SRM_RS02585 1943620077872e45e89dd2010d86cfdd 1047 Pfam PF00873 AcrB/AcrD/AcrF family 6 1034 4.2E-165 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 SRM_RS02585 1943620077872e45e89dd2010d86cfdd 1047 SUPERFAMILY SSF82693 42 131 6.1E-19 T 22-04-2016 SRM_RS02585 1943620077872e45e89dd2010d86cfdd 1047 SUPERFAMILY SSF82866 290 485 5.89E-38 T 22-04-2016 SRM_RS02585 1943620077872e45e89dd2010d86cfdd 1047 PANTHER PTHR32063 1 1039 1.5E-289 T 22-04-2016 SRM_RS02585 1943620077872e45e89dd2010d86cfdd 1047 Gene3D G3DSA:3.30.70.1430 43 139 3.0E-20 T 22-04-2016 SRM_RS02585 1943620077872e45e89dd2010d86cfdd 1047 Gene3D G3DSA:1.10.3850.10 819 1035 1.9E-52 T 22-04-2016 SRM_RS02585 1943620077872e45e89dd2010d86cfdd 1047 Gene3D G3DSA:1.10.3850.10 271 485 8.5E-44 T 22-04-2016 SRM_RS02585 1943620077872e45e89dd2010d86cfdd 1047 SUPERFAMILY SSF82866 812 1037 5.89E-46 T 22-04-2016 SRM_RS02585 1943620077872e45e89dd2010d86cfdd 1047 SUPERFAMILY SSF82714 181 263 2.22E-13 T 22-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains SRM_RS02585 1943620077872e45e89dd2010d86cfdd 1047 SUPERFAMILY SSF82693 141 178 3.14E-9 T 22-04-2016 SRM_RS02585 1943620077872e45e89dd2010d86cfdd 1047 SUPERFAMILY SSF82693 266 321 3.14E-9 T 22-04-2016 SRM_RS02585 1943620077872e45e89dd2010d86cfdd 1047 SUPERFAMILY SSF82714 738 814 4.45E-13 T 22-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains SRM_RS02585 1943620077872e45e89dd2010d86cfdd 1047 Gene3D G3DSA:3.30.2090.10 738 814 4.9E-14 T 22-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains SRM_RS02585 1943620077872e45e89dd2010d86cfdd 1047 Gene3D G3DSA:3.30.2090.10 179 265 1.3E-12 T 22-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains SRM_RS02585 1943620077872e45e89dd2010d86cfdd 1047 PANTHER PTHR32063:SF33 1 1039 1.5E-289 T 22-04-2016 SRM_RS02585 1943620077872e45e89dd2010d86cfdd 1047 PRINTS PR00702 Acriflavin resistance protein family signature 383 407 2.0E-24 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 SRM_RS02585 1943620077872e45e89dd2010d86cfdd 1047 PRINTS PR00702 Acriflavin resistance protein family signature 436 459 2.0E-24 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 SRM_RS02585 1943620077872e45e89dd2010d86cfdd 1047 PRINTS PR00702 Acriflavin resistance protein family signature 39 57 2.0E-24 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 SRM_RS02585 1943620077872e45e89dd2010d86cfdd 1047 PRINTS PR00702 Acriflavin resistance protein family signature 329 352 2.0E-24 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 SRM_RS04020 3e06986dc658d61252c80b3f0f765cee 325 Gene3D G3DSA:3.90.25.10 199 317 2.8E-24 T 22-04-2016 SRM_RS04020 3e06986dc658d61252c80b3f0f765cee 325 PANTHER PTHR10366:SF77 2 324 2.5E-130 T 22-04-2016 SRM_RS04020 3e06986dc658d61252c80b3f0f765cee 325 SUPERFAMILY SSF51735 1 320 9.61E-90 T 22-04-2016 IPR016040 NAD(P)-binding domain SRM_RS04020 3e06986dc658d61252c80b3f0f765cee 325 PANTHER PTHR10366 2 324 2.5E-130 T 22-04-2016 SRM_RS04020 3e06986dc658d61252c80b3f0f765cee 325 Pfam PF16363 GDP-mannose 4,6 dehydratase 4 311 1.2E-61 T 22-04-2016 IPR016040 NAD(P)-binding domain SRM_RS04020 3e06986dc658d61252c80b3f0f765cee 325 PRINTS PR01713 Nucleotide sugar epimerase signature 216 231 5.9E-18 T 22-04-2016 IPR008089 Nucleotide sugar epimerase GO:0005975|GO:0016857 SRM_RS04020 3e06986dc658d61252c80b3f0f765cee 325 PRINTS PR01713 Nucleotide sugar epimerase signature 243 258 5.9E-18 T 22-04-2016 IPR008089 Nucleotide sugar epimerase GO:0005975|GO:0016857 SRM_RS04020 3e06986dc658d61252c80b3f0f765cee 325 PRINTS PR01713 Nucleotide sugar epimerase signature 29 45 5.9E-18 T 22-04-2016 IPR008089 Nucleotide sugar epimerase GO:0005975|GO:0016857 SRM_RS04020 3e06986dc658d61252c80b3f0f765cee 325 PRINTS PR01713 Nucleotide sugar epimerase signature 282 299 5.9E-18 T 22-04-2016 IPR008089 Nucleotide sugar epimerase GO:0005975|GO:0016857 SRM_RS04020 3e06986dc658d61252c80b3f0f765cee 325 Gene3D G3DSA:3.40.50.720 1 198 1.5E-63 T 22-04-2016 IPR016040 NAD(P)-binding domain SRM_RS12630 36d2c4cbef91cef0343ff20647b3a61f 592 PANTHER PTHR11814 2 573 4.3E-200 T 22-04-2016 IPR001902 SLC26A/SulP transporter GO:0008271|GO:0008272|GO:0016020|GO:0055085 Reactome: REACT_15518 SRM_RS12630 36d2c4cbef91cef0343ff20647b3a61f 592 Pfam PF00916 Sulfate permease family 27 393 1.5E-100 T 22-04-2016 IPR011547 SLC26A/SulP transporter domain GO:0008272|GO:0015116|GO:0016021 SRM_RS12630 36d2c4cbef91cef0343ff20647b3a61f 592 Gene3D G3DSA:3.30.750.24 453 557 6.6E-15 T 22-04-2016 IPR002645 STAS domain SRM_RS12630 36d2c4cbef91cef0343ff20647b3a61f 592 TIGRFAM TIGR00815 sulP: sulfate permease 14 552 2.3E-138 T 22-04-2016 IPR001902 SLC26A/SulP transporter GO:0008271|GO:0008272|GO:0016020|GO:0055085 Reactome: REACT_15518 SRM_RS12630 36d2c4cbef91cef0343ff20647b3a61f 592 Pfam PF01740 STAS domain 449 556 5.7E-17 T 22-04-2016 IPR002645 STAS domain SRM_RS12630 36d2c4cbef91cef0343ff20647b3a61f 592 ProSitePatterns PS01130 SLC26A transporters signature. 56 77 - T 22-04-2016 IPR018045 Sulphate anion transporter, conserved site GO:0008271|GO:0008272 SRM_RS12630 36d2c4cbef91cef0343ff20647b3a61f 592 SUPERFAMILY SSF52091 452 557 5.89E-14 T 22-04-2016 IPR002645 STAS domain SRM_RS09485 fab9c15b5b501781a75913baa7784204 335 Gene3D G3DSA:3.90.640.10 182 253 3.4E-27 T 22-04-2016 SRM_RS09485 fab9c15b5b501781a75913baa7784204 335 SUPERFAMILY SSF53067 144 328 3.14E-44 T 22-04-2016 SRM_RS09485 fab9c15b5b501781a75913baa7784204 335 SUPERFAMILY SSF53067 6 143 3.07E-37 T 22-04-2016 SRM_RS09485 fab9c15b5b501781a75913baa7784204 335 Gene3D G3DSA:3.30.420.40 156 181 1.0E-30 T 22-04-2016 SRM_RS09485 fab9c15b5b501781a75913baa7784204 335 Gene3D G3DSA:3.30.420.40 258 312 1.0E-30 T 22-04-2016 SRM_RS09485 fab9c15b5b501781a75913baa7784204 335 PANTHER PTHR19375:SF117 3 321 4.9E-148 T 22-04-2016 SRM_RS09485 fab9c15b5b501781a75913baa7784204 335 Pfam PF06723 MreB/Mbl protein 7 330 4.0E-133 T 22-04-2016 IPR004753 Cell shape determining protein MreB/Mrl GO:0000902 SRM_RS09485 fab9c15b5b501781a75913baa7784204 335 TIGRFAM TIGR00904 mreB: cell shape determining protein, MreB/Mrl family 6 331 2.7E-131 T 22-04-2016 IPR004753 Cell shape determining protein MreB/Mrl GO:0000902 SRM_RS09485 fab9c15b5b501781a75913baa7784204 335 PANTHER PTHR19375 3 321 4.9E-148 T 22-04-2016 SRM_RS09485 fab9c15b5b501781a75913baa7784204 335 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 182 202 7.8E-42 T 22-04-2016 IPR004753 Cell shape determining protein MreB/Mrl GO:0000902 SRM_RS09485 fab9c15b5b501781a75913baa7784204 335 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 44 62 7.8E-42 T 22-04-2016 IPR004753 Cell shape determining protein MreB/Mrl GO:0000902 SRM_RS09485 fab9c15b5b501781a75913baa7784204 335 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 295 321 7.8E-42 T 22-04-2016 IPR004753 Cell shape determining protein MreB/Mrl GO:0000902 SRM_RS09485 fab9c15b5b501781a75913baa7784204 335 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 64 87 7.8E-42 T 22-04-2016 IPR004753 Cell shape determining protein MreB/Mrl GO:0000902 SRM_RS09485 fab9c15b5b501781a75913baa7784204 335 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 127 146 7.8E-42 T 22-04-2016 IPR004753 Cell shape determining protein MreB/Mrl GO:0000902 SRM_RS09485 fab9c15b5b501781a75913baa7784204 335 Gene3D G3DSA:3.30.420.40 6 155 1.6E-42 T 22-04-2016 SRM_RS14630 8b9f081014dc3c1ed7c92fdf1049722f 320 SUPERFAMILY SSF64518 21 320 2.75E-54 T 22-04-2016 SRM_RS14630 8b9f081014dc3c1ed7c92fdf1049722f 320 Pfam PF00669 Bacterial flagellin N-terminal helical region 16 145 3.8E-16 T 22-04-2016 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 SRM_RS14630 8b9f081014dc3c1ed7c92fdf1049722f 320 Gene3D G3DSA:1.20.1330.10 62 276 1.3E-16 T 22-04-2016 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 SRM_RS14630 8b9f081014dc3c1ed7c92fdf1049722f 320 PANTHER PTHR30244:SF5 8 320 5.0E-41 T 22-04-2016 SRM_RS14630 8b9f081014dc3c1ed7c92fdf1049722f 320 Pfam PF00700 Bacterial flagellin C-terminal helical region 238 320 3.1E-11 T 22-04-2016 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 SRM_RS14630 8b9f081014dc3c1ed7c92fdf1049722f 320 PANTHER PTHR30244 8 320 5.0E-41 T 22-04-2016 SRM_RS12315 6b78a16aea19e9ca43a7c6a00d4c7c25 545 PANTHER PTHR35148 43 527 3.3E-23 T 22-04-2016 SRM_RS12315 6b78a16aea19e9ca43a7c6a00d4c7c25 545 Pfam PF12771 Starch-binding associating with outer membrane 13 506 2.8E-35 T 22-04-2016 SRM_RS12315 6b78a16aea19e9ca43a7c6a00d4c7c25 545 SUPERFAMILY SSF48452 24 506 5.69E-87 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 SRM_RS05450 2ce4c6e51d78c193be643c44a0657fc8 142 Gene3D G3DSA:2.60.120.460 1 140 4.8E-52 T 22-04-2016 IPR001602 Uncharacterised protein family UPF0047 SRM_RS05450 2ce4c6e51d78c193be643c44a0657fc8 142 PANTHER PTHR30615 1 142 9.6E-67 T 22-04-2016 SRM_RS05450 2ce4c6e51d78c193be643c44a0657fc8 142 Pfam PF01894 Uncharacterised protein family UPF0047 20 136 1.1E-36 T 22-04-2016 IPR001602 Uncharacterised protein family UPF0047 SRM_RS05450 2ce4c6e51d78c193be643c44a0657fc8 142 SUPERFAMILY SSF111038 2 140 4.32E-45 T 22-04-2016 IPR001602 Uncharacterised protein family UPF0047 SRM_RS05450 2ce4c6e51d78c193be643c44a0657fc8 142 PIRSF PIRSF004681 1 140 1.2E-43 T 22-04-2016 IPR001602 Uncharacterised protein family UPF0047 SRM_RS05450 2ce4c6e51d78c193be643c44a0657fc8 142 ProSitePatterns PS01314 Uncharacterized protein family UPF0047 signature. 101 119 - T 22-04-2016 IPR001602 Uncharacterised protein family UPF0047 SRM_RS05450 2ce4c6e51d78c193be643c44a0657fc8 142 TIGRFAM TIGR00149 TIGR00149_YjbQ: secondary thiamine-phosphate synthase enzyme 11 140 5.0E-40 T 22-04-2016 IPR001602 Uncharacterised protein family UPF0047 SRM_RS08015 3de1a430e57e23a610509ce3dc05014c 212 PANTHER PTHR11935 1 140 4.0E-17 T 22-04-2016 SRM_RS08015 3de1a430e57e23a610509ce3dc05014c 212 PANTHER PTHR11935:SF95 1 140 4.0E-17 T 22-04-2016 SRM_RS08015 3de1a430e57e23a610509ce3dc05014c 212 Gene3D G3DSA:3.60.15.10 2 167 3.1E-33 T 22-04-2016 IPR001279 Metallo-beta-lactamase SRM_RS08015 3de1a430e57e23a610509ce3dc05014c 212 SUPERFAMILY SSF56281 2 191 1.62E-34 T 22-04-2016 IPR001279 Metallo-beta-lactamase SRM_RS08015 3de1a430e57e23a610509ce3dc05014c 212 Pfam PF00753 Metallo-beta-lactamase superfamily 2 137 2.4E-13 T 22-04-2016 IPR001279 Metallo-beta-lactamase SRM_RS08015 3de1a430e57e23a610509ce3dc05014c 212 SMART SM00849 1 137 1.3E-6 T 22-04-2016 IPR001279 Metallo-beta-lactamase SRM_RS09505 66ac94dccc0f0bbe0dafcb65c34c406a 481 Pfam PF07724 AAA domain (Cdc48 subfamily) 203 365 5.8E-38 T 22-04-2016 IPR003959 ATPase, AAA-type, core GO:0005524 SRM_RS09505 66ac94dccc0f0bbe0dafcb65c34c406a 481 SMART SM00382 56 372 5.4E-12 T 22-04-2016 IPR003593 AAA+ ATPase domain SRM_RS09505 66ac94dccc0f0bbe0dafcb65c34c406a 481 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 371 447 3.3E-6 T 22-04-2016 IPR019489 Clp ATPase, C-terminal SRM_RS09505 66ac94dccc0f0bbe0dafcb65c34c406a 481 Hamap MF_00249 ATP-dependent protease ATPase subunit HslU [hslU]. 8 481 41.659 T 22-04-2016 IPR004491 Heat shock protein HslU GO:0005524|GO:0005737|GO:0009376|GO:0016887|GO:0070011 SRM_RS09505 66ac94dccc0f0bbe0dafcb65c34c406a 481 Gene3D G3DSA:1.10.8.10 118 206 1.0E-31 T 22-04-2016 SRM_RS09505 66ac94dccc0f0bbe0dafcb65c34c406a 481 Gene3D G3DSA:1.10.8.10 244 274 1.0E-31 T 22-04-2016 SRM_RS09505 66ac94dccc0f0bbe0dafcb65c34c406a 481 Gene3D G3DSA:3.40.50.300 11 117 5.8E-48 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SRM_RS09505 66ac94dccc0f0bbe0dafcb65c34c406a 481 Gene3D G3DSA:3.40.50.300 276 367 5.8E-48 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SRM_RS09505 66ac94dccc0f0bbe0dafcb65c34c406a 481 SUPERFAMILY SSF52540 11 479 8.67E-86 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SRM_RS09505 66ac94dccc0f0bbe0dafcb65c34c406a 481 PANTHER PTHR11262 9 112 4.9E-184 T 22-04-2016 SRM_RS09505 66ac94dccc0f0bbe0dafcb65c34c406a 481 PANTHER PTHR11262 249 481 4.9E-184 T 22-04-2016 SRM_RS09505 66ac94dccc0f0bbe0dafcb65c34c406a 481 TIGRFAM TIGR00390 hslU: ATP-dependent protease HslVU, ATPase subunit 11 481 1.5E-189 T 22-04-2016 IPR004491 Heat shock protein HslU GO:0005524|GO:0005737|GO:0009376|GO:0016887|GO:0070011 SRM_RS09505 66ac94dccc0f0bbe0dafcb65c34c406a 481 SMART SM01086 371 467 6.8E-26 T 22-04-2016 IPR019489 Clp ATPase, C-terminal SRM_RS09505 66ac94dccc0f0bbe0dafcb65c34c406a 481 Gene3D G3DSA:1.10.8.60 370 481 2.1E-33 T 22-04-2016 SRM_RS09505 66ac94dccc0f0bbe0dafcb65c34c406a 481 PANTHER PTHR11262:SF3 9 112 4.9E-184 T 22-04-2016 IPR004491 Heat shock protein HslU GO:0005524|GO:0005737|GO:0009376|GO:0016887|GO:0070011 SRM_RS09505 66ac94dccc0f0bbe0dafcb65c34c406a 481 PANTHER PTHR11262:SF3 249 481 4.9E-184 T 22-04-2016 IPR004491 Heat shock protein HslU GO:0005524|GO:0005737|GO:0009376|GO:0016887|GO:0070011 SRM_RS09505 66ac94dccc0f0bbe0dafcb65c34c406a 481 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 60 106 1.2E-5 T 22-04-2016 IPR003959 ATPase, AAA-type, core GO:0005524 SRM_RS13335 0e7814f65012dc02f3614deec1afa595 646 PANTHER PTHR30627:SF2 2 613 2.2E-163 T 22-04-2016 SRM_RS13335 0e7814f65012dc02f3614deec1afa595 646 Gene3D G3DSA:3.40.710.10 237 578 2.6E-106 T 22-04-2016 IPR012338 Beta-lactamase/transpeptidase-like SRM_RS13335 0e7814f65012dc02f3614deec1afa595 646 SUPERFAMILY SSF56601 238 578 3.56E-97 T 22-04-2016 IPR012338 Beta-lactamase/transpeptidase-like SRM_RS13335 0e7814f65012dc02f3614deec1afa595 646 TIGRFAM TIGR03423 pbp2_mrdA: penicillin-binding protein 2 7 578 6.1E-183 T 22-04-2016 IPR017790 Penicillin-binding protein 2 GO:0016020 UniPathway: UPA00219 SRM_RS13335 0e7814f65012dc02f3614deec1afa595 646 Gene3D G3DSA:3.90.1310.10 115 236 1.5E-26 T 22-04-2016 SRM_RS13335 0e7814f65012dc02f3614deec1afa595 646 SUPERFAMILY SSF56519 45 237 1.83E-39 T 22-04-2016 IPR005311 Penicillin-binding protein, dimerisation domain GO:0008658 SRM_RS13335 0e7814f65012dc02f3614deec1afa595 646 Pfam PF03717 Penicillin-binding Protein dimerisation domain 52 218 7.0E-37 T 22-04-2016 IPR005311 Penicillin-binding protein, dimerisation domain GO:0008658 SRM_RS13335 0e7814f65012dc02f3614deec1afa595 646 Pfam PF00905 Penicillin binding protein transpeptidase domain 255 570 3.1E-69 T 22-04-2016 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 SRM_RS13335 0e7814f65012dc02f3614deec1afa595 646 PANTHER PTHR30627 2 613 2.2E-163 T 22-04-2016 SRM_RS01310 6dbbe3444346bc5ebe6578965aafdd99 322 PANTHER PTHR21666 91 255 1.5E-37 T 22-04-2016 SRM_RS01310 6dbbe3444346bc5ebe6578965aafdd99 322 PANTHER PTHR21666:SF210 91 255 1.5E-37 T 22-04-2016 SRM_RS01310 6dbbe3444346bc5ebe6578965aafdd99 322 SUPERFAMILY SSF54001 77 200 4.58E-37 T 22-04-2016 SRM_RS01310 6dbbe3444346bc5ebe6578965aafdd99 322 Pfam PF00877 NlpC/P60 family 94 197 9.9E-27 T 22-04-2016 IPR000064 Endopeptidase, NLPC/P60 domain KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00550+3.4.-.-|KEGG: 00780+3.4.-.- SRM_RS01310 6dbbe3444346bc5ebe6578965aafdd99 322 Gene3D G3DSA:3.90.1720.10 82 200 5.3E-40 T 22-04-2016 IPR000064 Endopeptidase, NLPC/P60 domain KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00550+3.4.-.-|KEGG: 00780+3.4.-.- SRM_RS13100 9d0b37dc7b079d032cc685566eab9e08 512 PRINTS PR01043 Glycyl-tRNA synthetase signature 370 382 1.7E-51 T 22-04-2016 IPR002315 Glycyl-tRNA synthetase GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 SRM_RS13100 9d0b37dc7b079d032cc685566eab9e08 512 PRINTS PR01043 Glycyl-tRNA synthetase signature 248 265 1.7E-51 T 22-04-2016 IPR002315 Glycyl-tRNA synthetase GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 SRM_RS13100 9d0b37dc7b079d032cc685566eab9e08 512 PRINTS PR01043 Glycyl-tRNA synthetase signature 265 275 1.7E-51 T 22-04-2016 IPR002315 Glycyl-tRNA synthetase GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 SRM_RS13100 9d0b37dc7b079d032cc685566eab9e08 512 PRINTS PR01043 Glycyl-tRNA synthetase signature 451 470 1.7E-51 T 22-04-2016 IPR002315 Glycyl-tRNA synthetase GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 SRM_RS13100 9d0b37dc7b079d032cc685566eab9e08 512 PRINTS PR01043 Glycyl-tRNA synthetase signature 58 72 1.7E-51 T 22-04-2016 IPR002315 Glycyl-tRNA synthetase GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 SRM_RS13100 9d0b37dc7b079d032cc685566eab9e08 512 PRINTS PR01043 Glycyl-tRNA synthetase signature 216 233 1.7E-51 T 22-04-2016 IPR002315 Glycyl-tRNA synthetase GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 SRM_RS13100 9d0b37dc7b079d032cc685566eab9e08 512 PRINTS PR01043 Glycyl-tRNA synthetase signature 197 209 1.7E-51 T 22-04-2016 IPR002315 Glycyl-tRNA synthetase GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 SRM_RS13100 9d0b37dc7b079d032cc685566eab9e08 512 Gene3D G3DSA:3.30.930.10 40 124 6.6E-139 T 22-04-2016 SRM_RS13100 9d0b37dc7b079d032cc685566eab9e08 512 Gene3D G3DSA:3.30.930.10 183 408 6.6E-139 T 22-04-2016 SRM_RS13100 9d0b37dc7b079d032cc685566eab9e08 512 PANTHER PTHR10745 40 509 4.7E-193 T 22-04-2016 IPR027031 Glycyl-tRNA synthetase/DNA polymerase subunit gamma-2 KEGG: 00970+6.1.1.14 SRM_RS13100 9d0b37dc7b079d032cc685566eab9e08 512 Pfam PF03129 Anticodon binding domain 417 501 1.3E-21 T 22-04-2016 IPR004154 Anticodon-binding SRM_RS13100 9d0b37dc7b079d032cc685566eab9e08 512 TIGRFAM TIGR00389 glyS_dimeric: glycine--tRNA ligase 40 295 7.4E-85 T 22-04-2016 IPR002315 Glycyl-tRNA synthetase GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 SRM_RS13100 9d0b37dc7b079d032cc685566eab9e08 512 Hamap MF_00253_B Glycine--tRNA ligase [glyQS]. 36 506 46.571 T 22-04-2016 IPR022961 Glycine-tRNA ligase, bacterial GO:0004820 KEGG: 00970+6.1.1.14 SRM_RS13100 9d0b37dc7b079d032cc685566eab9e08 512 Pfam PF00587 tRNA synthetase class II core domain (G, H, P, S and T) 213 386 2.4E-8 T 22-04-2016 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 SRM_RS13100 9d0b37dc7b079d032cc685566eab9e08 512 Gene3D G3DSA:3.40.50.800 409 506 9.1E-39 T 22-04-2016 IPR004154 Anticodon-binding SRM_RS13100 9d0b37dc7b079d032cc685566eab9e08 512 SUPERFAMILY SSF55681 38 417 8.87E-109 T 22-04-2016 SRM_RS13100 9d0b37dc7b079d032cc685566eab9e08 512 SUPERFAMILY SSF52954 401 505 3.47E-32 T 22-04-2016 IPR004154 Anticodon-binding SRM_RS13700 eba0894321837e1ec629f11219036cc4 525 PANTHER PTHR11596 86 441 1.2E-83 T 22-04-2016 SRM_RS13700 eba0894321837e1ec629f11219036cc4 525 PANTHER PTHR11596 470 522 1.2E-83 T 22-04-2016 SRM_RS13700 eba0894321837e1ec629f11219036cc4 525 PANTHER PTHR11596:SF5 86 441 1.2E-83 T 22-04-2016 SRM_RS13700 eba0894321837e1ec629f11219036cc4 525 PANTHER PTHR11596:SF5 470 522 1.2E-83 T 22-04-2016 SRM_RS13700 eba0894321837e1ec629f11219036cc4 525 TIGRFAM TIGR01409 TAT_signal_seq: Tat (twin-arginine translocation) pathway signal sequence 50 74 5.5E-5 T 22-04-2016 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal SRM_RS13700 eba0894321837e1ec629f11219036cc4 525 Pfam PF00245 Alkaline phosphatase 91 516 9.1E-69 T 22-04-2016 IPR001952 Alkaline phosphatase GO:0008152|GO:0016791 KEGG: 00627+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 SRM_RS13700 eba0894321837e1ec629f11219036cc4 525 SUPERFAMILY SSF53649 434 518 1.83E-100 T 22-04-2016 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 SRM_RS13700 eba0894321837e1ec629f11219036cc4 525 SUPERFAMILY SSF53649 86 385 1.83E-100 T 22-04-2016 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 SRM_RS13700 eba0894321837e1ec629f11219036cc4 525 PRINTS PR00113 Alkaline phosphatase signature 91 111 1.1E-35 T 22-04-2016 IPR001952 Alkaline phosphatase GO:0008152|GO:0016791 KEGG: 00627+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 SRM_RS13700 eba0894321837e1ec629f11219036cc4 525 PRINTS PR00113 Alkaline phosphatase signature 147 162 1.1E-35 T 22-04-2016 IPR001952 Alkaline phosphatase GO:0008152|GO:0016791 KEGG: 00627+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 SRM_RS13700 eba0894321837e1ec629f11219036cc4 525 PRINTS PR00113 Alkaline phosphatase signature 305 334 1.1E-35 T 22-04-2016 IPR001952 Alkaline phosphatase GO:0008152|GO:0016791 KEGG: 00627+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 SRM_RS13700 eba0894321837e1ec629f11219036cc4 525 PRINTS PR00113 Alkaline phosphatase signature 184 204 1.1E-35 T 22-04-2016 IPR001952 Alkaline phosphatase GO:0008152|GO:0016791 KEGG: 00627+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 SRM_RS13700 eba0894321837e1ec629f11219036cc4 525 PRINTS PR00113 Alkaline phosphatase signature 228 238 1.1E-35 T 22-04-2016 IPR001952 Alkaline phosphatase GO:0008152|GO:0016791 KEGG: 00627+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 SRM_RS13700 eba0894321837e1ec629f11219036cc4 525 SMART SM00098 92 520 6.0E-33 T 22-04-2016 IPR001952 Alkaline phosphatase GO:0008152|GO:0016791 KEGG: 00627+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 SRM_RS13700 eba0894321837e1ec629f11219036cc4 525 Gene3D G3DSA:3.40.720.10 442 522 1.2E-102 T 22-04-2016 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 SRM_RS13700 eba0894321837e1ec629f11219036cc4 525 Gene3D G3DSA:3.40.720.10 71 391 1.2E-102 T 22-04-2016 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 SRM_RS05550 9a599d13e6f23a3ff6cceccd3d7779e8 267 SUPERFAMILY SSF81606 32 249 3.14E-10 T 22-04-2016 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04660+3.1.3.16 SRM_RS05550 9a599d13e6f23a3ff6cceccd3d7779e8 267 Gene3D G3DSA:3.60.40.10 32 153 8.7E-5 T 22-04-2016 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04660+3.1.3.16 SRM_RS05550 9a599d13e6f23a3ff6cceccd3d7779e8 267 Pfam PF13672 Protein phosphatase 2C 27 208 2.7E-10 T 22-04-2016 SRM_RS11630 7f10aa908b2bfbdf95b39e419bd75459 217 Pfam PF02742 Iron dependent repressor, metal binding and dimerisation domain 64 132 5.7E-29 T 22-04-2016 IPR001367 Iron dependent repressor, metal binding and dimerisation domain GO:0046914|GO:0046983 SRM_RS11630 7f10aa908b2bfbdf95b39e419bd75459 217 SMART SM00899 144 217 3.2E-12 T 22-04-2016 IPR007167 Ferrous iron transporter FeoA domain GO:0046914 SRM_RS11630 7f10aa908b2bfbdf95b39e419bd75459 217 Gene3D G3DSA:2.30.30.90 156 216 4.3E-4 T 22-04-2016 SRM_RS11630 7f10aa908b2bfbdf95b39e419bd75459 217 SUPERFAMILY SSF50037 146 216 5.95E-9 T 22-04-2016 IPR008988 Transcriptional repressor, C-terminal SRM_RS11630 7f10aa908b2bfbdf95b39e419bd75459 217 SUPERFAMILY SSF46785 4 63 7.87E-11 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SRM_RS11630 7f10aa908b2bfbdf95b39e419bd75459 217 Gene3D G3DSA:1.10.60.10 75 138 3.2E-28 T 22-04-2016 IPR001367 Iron dependent repressor, metal binding and dimerisation domain GO:0046914|GO:0046983 SRM_RS11630 7f10aa908b2bfbdf95b39e419bd75459 217 Pfam PF04023 FeoA domain 144 216 5.8E-16 T 22-04-2016 IPR007167 Ferrous iron transporter FeoA domain GO:0046914 SRM_RS11630 7f10aa908b2bfbdf95b39e419bd75459 217 Gene3D G3DSA:1.10.10.10 3 74 1.5E-21 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SRM_RS11630 7f10aa908b2bfbdf95b39e419bd75459 217 SUPERFAMILY SSF47979 64 136 1.83E-25 T 22-04-2016 IPR001367 Iron dependent repressor, metal binding and dimerisation domain GO:0046914|GO:0046983 SRM_RS11630 7f10aa908b2bfbdf95b39e419bd75459 217 SMART SM00529 25 124 7.3E-40 T 22-04-2016 IPR022689 Iron dependent repressor GO:0003700|GO:0006355|GO:0046914 SRM_RS11630 7f10aa908b2bfbdf95b39e419bd75459 217 Pfam PF01325 Iron dependent repressor, N-terminal DNA binding domain 3 61 1.0E-16 T 22-04-2016 IPR022687 DTXR-type HTH domain GO:0003677 SRM_RS10330 5e953706114e9220d2b4c150464e8266 488 Gene3D G3DSA:1.10.10.350 386 484 4.3E-22 T 22-04-2016 IPR020751 Aminoacyl-tRNA synthetase, class I, anticodon-binding domain, subdomain 2 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188 SRM_RS10330 5e953706114e9220d2b4c150464e8266 488 Gene3D G3DSA:1.10.1160.10 251 338 5.4E-32 T 22-04-2016 IPR020061 Glutamyl/glutaminyl-tRNA synthetase, class Ib, alpha-bundle domain GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0006418 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188|Reactome: REACT_71 SRM_RS10330 5e953706114e9220d2b4c150464e8266 488 TIGRFAM TIGR00464 gltX_bact: glutamate--tRNA ligase 7 482 1.1E-152 T 22-04-2016 IPR004527 Glutamate-tRNA ligase, bacterial/mitochondrial GO:0000166|GO:0004818|GO:0005524|GO:0005737|GO:0006424 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188 SRM_RS10330 5e953706114e9220d2b4c150464e8266 488 Gene3D G3DSA:3.90.800.10 73 198 9.0E-39 T 22-04-2016 SRM_RS10330 5e953706114e9220d2b4c150464e8266 488 SUPERFAMILY SSF52374 7 319 2.68E-109 T 22-04-2016 SRM_RS10330 5e953706114e9220d2b4c150464e8266 488 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 13 24 - T 22-04-2016 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 SRM_RS10330 5e953706114e9220d2b4c150464e8266 488 Gene3D G3DSA:3.40.50.620 199 248 1.9E-50 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold SRM_RS10330 5e953706114e9220d2b4c150464e8266 488 Gene3D G3DSA:3.40.50.620 7 72 1.9E-50 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold SRM_RS10330 5e953706114e9220d2b4c150464e8266 488 SUPERFAMILY SSF48163 323 484 1.96E-35 T 22-04-2016 IPR008925 Aminoacyl-tRNA synthetase, class I, anticodon-binding GO:0000049 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188 SRM_RS10330 5e953706114e9220d2b4c150464e8266 488 PRINTS PR00987 Glutamyl-tRNA synthetase signature 197 207 1.1E-25 T 22-04-2016 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 Reactome: REACT_71 SRM_RS10330 5e953706114e9220d2b4c150464e8266 488 PRINTS PR00987 Glutamyl-tRNA synthetase signature 39 52 1.1E-25 T 22-04-2016 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 Reactome: REACT_71 SRM_RS10330 5e953706114e9220d2b4c150464e8266 488 PRINTS PR00987 Glutamyl-tRNA synthetase signature 213 221 1.1E-25 T 22-04-2016 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 Reactome: REACT_71 SRM_RS10330 5e953706114e9220d2b4c150464e8266 488 PRINTS PR00987 Glutamyl-tRNA synthetase signature 10 22 1.1E-25 T 22-04-2016 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 Reactome: REACT_71 SRM_RS10330 5e953706114e9220d2b4c150464e8266 488 PRINTS PR00987 Glutamyl-tRNA synthetase signature 24 35 1.1E-25 T 22-04-2016 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 Reactome: REACT_71 SRM_RS10330 5e953706114e9220d2b4c150464e8266 488 PANTHER PTHR11451 267 377 3.5E-109 T 22-04-2016 SRM_RS10330 5e953706114e9220d2b4c150464e8266 488 PANTHER PTHR11451 6 248 3.5E-109 T 22-04-2016 SRM_RS10330 5e953706114e9220d2b4c150464e8266 488 Hamap MF_00022_B Glutamate--tRNA ligase [gltX]. 7 484 33.13 T 22-04-2016 IPR004527 Glutamate-tRNA ligase, bacterial/mitochondrial GO:0000166|GO:0004818|GO:0005524|GO:0005737|GO:0006424 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188 SRM_RS10330 5e953706114e9220d2b4c150464e8266 488 PANTHER PTHR11451:SF41 267 377 3.5E-109 T 22-04-2016 SRM_RS10330 5e953706114e9220d2b4c150464e8266 488 PANTHER PTHR11451:SF41 6 248 3.5E-109 T 22-04-2016 SRM_RS10330 5e953706114e9220d2b4c150464e8266 488 Pfam PF00749 tRNA synthetases class I (E and Q), catalytic domain 7 329 2.7E-108 T 22-04-2016 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain GO:0005524|GO:0016876|GO:0043039 Reactome: REACT_71 SRM_RS09640 8b565a8fae3ed77e9b834cbcd70fdfbb 406 TIGRFAM TIGR00263 trpB: tryptophan synthase, beta subunit 18 404 2.8E-179 T 22-04-2016 IPR006654 Tryptophan synthase, beta chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20|UniPathway: UPA00035 SRM_RS09640 8b565a8fae3ed77e9b834cbcd70fdfbb 406 Hamap MF_00133 Tryptophan synthase beta chain [trpB]. 13 406 50.534 T 22-04-2016 IPR023026 Tryptophan synthase beta chain/beta chain-like GO:0000162|GO:0004834 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20|UniPathway: UPA00035 SRM_RS09640 8b565a8fae3ed77e9b834cbcd70fdfbb 406 Gene3D G3DSA:3.40.50.1100 110 188 1.1E-20 T 22-04-2016 SRM_RS09640 8b565a8fae3ed77e9b834cbcd70fdfbb 406 PIRSF PIRSF001413 2 406 1.8E-153 T 22-04-2016 IPR023026 Tryptophan synthase beta chain/beta chain-like GO:0000162|GO:0004834 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20|UniPathway: UPA00035 SRM_RS09640 8b565a8fae3ed77e9b834cbcd70fdfbb 406 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 63 389 6.3E-45 T 22-04-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme SRM_RS09640 8b565a8fae3ed77e9b834cbcd70fdfbb 406 Gene3D G3DSA:3.40.50.1100 189 404 1.7E-84 T 22-04-2016 SRM_RS09640 8b565a8fae3ed77e9b834cbcd70fdfbb 406 PANTHER PTHR10314:SF3 18 406 4.4E-216 T 22-04-2016 IPR006654 Tryptophan synthase, beta chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20|UniPathway: UPA00035 SRM_RS09640 8b565a8fae3ed77e9b834cbcd70fdfbb 406 PANTHER PTHR10314 18 406 4.4E-216 T 22-04-2016 SRM_RS09640 8b565a8fae3ed77e9b834cbcd70fdfbb 406 SUPERFAMILY SSF53686 14 403 2.36E-136 T 22-04-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme SRM_RS09640 8b565a8fae3ed77e9b834cbcd70fdfbb 406 ProSitePatterns PS00168 Tryptophan synthase beta chain pyridoxal-phosphate attachment site. 92 106 - T 22-04-2016 IPR006653 Tryptophan synthase, beta chain, conserved site GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20|UniPathway: UPA00035 SRM_RS09405 c45842b9227165add0663c73c489e064 154 PANTHER PTHR30308 1 147 7.6E-66 T 22-04-2016 SRM_RS09405 c45842b9227165add0663c73c489e064 154 SUPERFAMILY SSF74982 4 132 8.76E-45 T 22-04-2016 IPR023620 Small protein B SRM_RS09405 c45842b9227165add0663c73c489e064 154 Pfam PF01668 SmpB protein 7 71 1.3E-26 T 22-04-2016 IPR000037 SsrA-binding protein GO:0003723 SRM_RS09405 c45842b9227165add0663c73c489e064 154 ProDom PD004488 SSRA-BINDING RNA-BINDING SMPB SMALL B TMRNA-BINDING SSRA 3D-STRUCTURE HOMOLOG BINDING 9 132 3.0E-34 T 22-04-2016 IPR000037 SsrA-binding protein GO:0003723 SRM_RS09405 c45842b9227165add0663c73c489e064 154 Hamap MF_00023 SsrA-binding protein [smpB]. 1 154 61.937 T 22-04-2016 IPR000037 SsrA-binding protein GO:0003723 SRM_RS09405 c45842b9227165add0663c73c489e064 154 Gene3D G3DSA:2.40.280.10 7 127 4.1E-45 T 22-04-2016 IPR023620 Small protein B SRM_RS09405 c45842b9227165add0663c73c489e064 154 TIGRFAM TIGR00086 smpB: SsrA-binding protein 8 148 1.7E-52 T 22-04-2016 IPR000037 SsrA-binding protein GO:0003723 SRM_RS09405 c45842b9227165add0663c73c489e064 154 ProSitePatterns PS01317 SsrA-binding protein. 26 38 - T 22-04-2016 IPR020081 SsrA-binding protein, conserved site SRM_RS09405 c45842b9227165add0663c73c489e064 154 PANTHER PTHR30308:SF2 1 147 7.6E-66 T 22-04-2016 SRM_RS04025 406f9f2abb0463bb9dde30f776e41446 380 Gene3D G3DSA:3.90.25.10 266 288 1.4E-12 T 22-04-2016 SRM_RS04025 406f9f2abb0463bb9dde30f776e41446 380 Gene3D G3DSA:3.90.25.10 341 367 1.4E-12 T 22-04-2016 SRM_RS04025 406f9f2abb0463bb9dde30f776e41446 380 PANTHER PTHR10366 48 373 7.3E-98 T 22-04-2016 SRM_RS04025 406f9f2abb0463bb9dde30f776e41446 380 Gene3D G3DSA:3.40.50.720 47 265 4.5E-47 T 22-04-2016 IPR016040 NAD(P)-binding domain SRM_RS04025 406f9f2abb0463bb9dde30f776e41446 380 Pfam PF01370 NAD dependent epimerase/dehydratase family 49 293 3.1E-40 T 22-04-2016 IPR001509 NAD-dependent epimerase/dehydratase, N-terminal domain GO:0003824|GO:0050662 SRM_RS04025 406f9f2abb0463bb9dde30f776e41446 380 SUPERFAMILY SSF51735 45 366 6.2E-69 T 22-04-2016 IPR016040 NAD(P)-binding domain SRM_RS04025 406f9f2abb0463bb9dde30f776e41446 380 PANTHER PTHR10366:SF234 48 373 7.3E-98 T 22-04-2016 SRM_RS05595 5c83e3b099e7b094f51842d065183e2f 396 SUPERFAMILY SSF63829 66 316 3.33E-17 T 22-04-2016 SRM_RS05595 5c83e3b099e7b094f51842d065183e2f 396 Gene3D G3DSA:2.130.10.10 305 394 4.6E-20 T 22-04-2016 IPR015943 WD40/YVTN repeat-like-containing domain GO:0005515 SRM_RS05595 5c83e3b099e7b094f51842d065183e2f 396 Gene3D G3DSA:2.130.10.10 66 244 4.6E-20 T 22-04-2016 IPR015943 WD40/YVTN repeat-like-containing domain GO:0005515 SRM_RS01305 317ab805423409ae258666ca30d1b29f 254 SUPERFAMILY SSF46689 199 249 1.75E-10 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 SRM_RS01305 317ab805423409ae258666ca30d1b29f 254 Gene3D G3DSA:1.10.10.60 202 249 5.0E-14 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 SRM_RS01305 317ab805423409ae258666ca30d1b29f 254 PANTHER PTHR11019 149 254 2.4E-25 T 22-04-2016 SRM_RS01305 317ab805423409ae258666ca30d1b29f 254 SMART SM00342 163 246 5.2E-26 T 22-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 SRM_RS01305 317ab805423409ae258666ca30d1b29f 254 Gene3D G3DSA:1.10.10.60 149 201 6.3E-12 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 SRM_RS01305 317ab805423409ae258666ca30d1b29f 254 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 230 246 7.6E-5 T 22-04-2016 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 SRM_RS01305 317ab805423409ae258666ca30d1b29f 254 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 215 230 7.6E-5 T 22-04-2016 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 SRM_RS01305 317ab805423409ae258666ca30d1b29f 254 Pfam PF12833 Helix-turn-helix domain 169 247 1.4E-24 T 22-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 SRM_RS01305 317ab805423409ae258666ca30d1b29f 254 SUPERFAMILY SSF46689 163 197 1.73E-5 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 SRM_RS03135 6f4c789a8d66c6d7aff5daa3ff669d7d 501 PANTHER PTHR12526:SF363 98 482 1.5E-88 T 22-04-2016 SRM_RS03135 6f4c789a8d66c6d7aff5daa3ff669d7d 501 Gene3D G3DSA:3.40.50.2000 284 461 8.0E-34 T 22-04-2016 SRM_RS03135 6f4c789a8d66c6d7aff5daa3ff669d7d 501 SUPERFAMILY SSF53756 112 483 1.92E-83 T 22-04-2016 SRM_RS03135 6f4c789a8d66c6d7aff5daa3ff669d7d 501 Pfam PF00534 Glycosyl transferases group 1 301 461 1.0E-31 T 22-04-2016 IPR001296 Glycosyl transferase, family 1 SRM_RS03135 6f4c789a8d66c6d7aff5daa3ff669d7d 501 Pfam PF13439 Glycosyltransferase Family 4 125 292 9.9E-29 T 22-04-2016 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain SRM_RS03135 6f4c789a8d66c6d7aff5daa3ff669d7d 501 PANTHER PTHR12526 98 482 1.5E-88 T 22-04-2016 SRM_RS04690 ad8a41b5bed2ce8483f251070d3d9bf7 252 PANTHER PTHR10146 3 251 3.4E-87 T 22-04-2016 IPR011078 Uncharacterised protein family UPF0001 SRM_RS04690 ad8a41b5bed2ce8483f251070d3d9bf7 252 PIRSF PIRSF004848 10 252 8.2E-70 T 22-04-2016 IPR011078 Uncharacterised protein family UPF0001 SRM_RS04690 ad8a41b5bed2ce8483f251070d3d9bf7 252 TIGRFAM TIGR00044 TIGR00044: pyridoxal phosphate enzyme, YggS family 22 249 4.6E-57 T 22-04-2016 IPR011078 Uncharacterised protein family UPF0001 SRM_RS04690 ad8a41b5bed2ce8483f251070d3d9bf7 252 Pfam PF01168 Alanine racemase, N-terminal domain 26 249 9.6E-19 T 22-04-2016 IPR001608 Alanine racemase, N-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 SRM_RS04690 ad8a41b5bed2ce8483f251070d3d9bf7 252 SUPERFAMILY SSF51419 15 247 1.26E-71 T 22-04-2016 IPR029066 PLP-binding barrel SRM_RS04690 ad8a41b5bed2ce8483f251070d3d9bf7 252 ProSitePatterns PS01211 Uncharacterized protein family UPF0001 signature. 96 110 - T 22-04-2016 IPR011078 Uncharacterised protein family UPF0001 SRM_RS04690 ad8a41b5bed2ce8483f251070d3d9bf7 252 Gene3D G3DSA:3.20.20.10 11 251 5.5E-85 T 22-04-2016 IPR029066 PLP-binding barrel SRM_RS09850 5104b0e8ced0d9ddb7eb32f16938f900 362 SMART SM00870 7 330 2.6E-120 T 22-04-2016 IPR006034 Asparaginase/glutaminase GO:0006520 SRM_RS09850 5104b0e8ced0d9ddb7eb32f16938f900 362 PANTHER PTHR11707:SF28 7 346 1.0E-135 T 22-04-2016 SRM_RS09850 5104b0e8ced0d9ddb7eb32f16938f900 362 PRINTS PR00139 Asparaginase/glutaminase family signature 267 285 8.8E-13 T 22-04-2016 IPR006034 Asparaginase/glutaminase GO:0006520 SRM_RS09850 5104b0e8ced0d9ddb7eb32f16938f900 362 PRINTS PR00139 Asparaginase/glutaminase family signature 8 19 8.8E-13 T 22-04-2016 IPR006034 Asparaginase/glutaminase GO:0006520 SRM_RS09850 5104b0e8ced0d9ddb7eb32f16938f900 362 PRINTS PR00139 Asparaginase/glutaminase family signature 85 103 8.8E-13 T 22-04-2016 IPR006034 Asparaginase/glutaminase GO:0006520 SRM_RS09850 5104b0e8ced0d9ddb7eb32f16938f900 362 ProSitePatterns PS00917 Asparaginase / glutaminase active site signature 2. 86 96 - T 22-04-2016 IPR027475 Asparaginase/glutaminase, active site 2 SRM_RS09850 5104b0e8ced0d9ddb7eb32f16938f900 362 PIRSF PIRSF001220 2 341 2.7E-81 T 22-04-2016 IPR006034 Asparaginase/glutaminase GO:0006520 SRM_RS09850 5104b0e8ced0d9ddb7eb32f16938f900 362 Pfam PF00710 Asparaginase, N-terminal 7 197 6.1E-59 T 22-04-2016 IPR027474 L-asparaginase, N-terminal SRM_RS09850 5104b0e8ced0d9ddb7eb32f16938f900 362 Gene3D G3DSA:3.40.50.1170 4 207 4.9E-69 T 22-04-2016 IPR027474 L-asparaginase, N-terminal SRM_RS09850 5104b0e8ced0d9ddb7eb32f16938f900 362 SUPERFAMILY SSF53774 6 342 3.01E-100 T 22-04-2016 IPR006034 Asparaginase/glutaminase GO:0006520 SRM_RS09850 5104b0e8ced0d9ddb7eb32f16938f900 362 Gene3D G3DSA:3.40.50.40 217 343 1.3E-43 T 22-04-2016 IPR027473 L-asparaginase, C-terminal domain SRM_RS09850 5104b0e8ced0d9ddb7eb32f16938f900 362 TIGRFAM TIGR00519 asnASE_I: L-asparaginase, type I 6 342 2.7E-86 T 22-04-2016 IPR006033 L-asparaginase, type I GO:0004067|GO:0006520 SRM_RS09850 5104b0e8ced0d9ddb7eb32f16938f900 362 PIRSF PIRSF500176 4 339 7.8E-94 T 22-04-2016 SRM_RS09850 5104b0e8ced0d9ddb7eb32f16938f900 362 PANTHER PTHR11707 7 346 1.0E-135 T 22-04-2016 SRM_RS10495 43fad4f8c7cd0d570429dc8f29065d13 303 Pfam PF02355 Protein export membrane protein 109 296 1.4E-63 T 22-04-2016 IPR022813 Protein-export membrane protein SecD/SecF, archaeal and bacterial SRM_RS10495 43fad4f8c7cd0d570429dc8f29065d13 303 SUPERFAMILY SSF82866 95 299 5.89E-34 T 22-04-2016 SRM_RS10495 43fad4f8c7cd0d570429dc8f29065d13 303 PANTHER PTHR30081 5 297 7.9E-64 T 22-04-2016 SRM_RS10495 43fad4f8c7cd0d570429dc8f29065d13 303 PRINTS PR01755 Bacterial translocase SecF protein signature 235 250 4.7E-28 T 22-04-2016 IPR022645 Protein-export membrane protein SecD/SecF, bacterial SRM_RS10495 43fad4f8c7cd0d570429dc8f29065d13 303 PRINTS PR01755 Bacterial translocase SecF protein signature 149 163 4.7E-28 T 22-04-2016 IPR022645 Protein-export membrane protein SecD/SecF, bacterial SRM_RS10495 43fad4f8c7cd0d570429dc8f29065d13 303 PRINTS PR01755 Bacterial translocase SecF protein signature 203 221 4.7E-28 T 22-04-2016 IPR022645 Protein-export membrane protein SecD/SecF, bacterial SRM_RS10495 43fad4f8c7cd0d570429dc8f29065d13 303 PRINTS PR01755 Bacterial translocase SecF protein signature 36 51 4.7E-28 T 22-04-2016 IPR022645 Protein-export membrane protein SecD/SecF, bacterial SRM_RS10495 43fad4f8c7cd0d570429dc8f29065d13 303 Gene3D G3DSA:1.20.1640.10 111 300 3.7E-24 T 22-04-2016 SRM_RS10495 43fad4f8c7cd0d570429dc8f29065d13 303 TIGRFAM TIGR00966 3a0501s07: protein-export membrane protein SecF 37 287 4.6E-75 T 22-04-2016 IPR005665 Protein-export membrane protein SecF, bacterial GO:0006886|GO:0015450 SRM_RS10495 43fad4f8c7cd0d570429dc8f29065d13 303 PANTHER PTHR30081:SF8 5 297 7.9E-64 T 22-04-2016 SRM_RS10495 43fad4f8c7cd0d570429dc8f29065d13 303 Pfam PF07549 SecD/SecF GG Motif 32 52 1.6E-5 T 22-04-2016 IPR022646 Protein-export membrane protein SecD/SecF/SecDF, conserved site SRM_RS10495 43fad4f8c7cd0d570429dc8f29065d13 303 Hamap MF_01464_B Protein-export membrane protein SecF [secF]. 9 298 26.875 T 22-04-2016 IPR005665 Protein-export membrane protein SecF, bacterial GO:0006886|GO:0015450 SRM_RS10495 43fad4f8c7cd0d570429dc8f29065d13 303 TIGRFAM TIGR00916 2A0604s01: protein-export membrane protein, SecD/SecF family 69 284 6.7E-55 T 22-04-2016 IPR022645 Protein-export membrane protein SecD/SecF, bacterial SRM_RS08500 ca471a3ca084cb5b07f1144fb1f2bfc1 485 SMART SM00091 172 239 1.3E-7 T 22-04-2016 IPR000014 PAS domain SRM_RS08500 ca471a3ca084cb5b07f1144fb1f2bfc1 485 SUPERFAMILY SSF158472 121 166 9.55E-7 T 22-04-2016 SRM_RS08500 ca471a3ca084cb5b07f1144fb1f2bfc1 485 SMART SM00387 389 483 1.7E-6 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SRM_RS08500 ca471a3ca084cb5b07f1144fb1f2bfc1 485 SUPERFAMILY SSF55785 184 284 1.82E-15 T 22-04-2016 IPR000014 PAS domain SRM_RS08500 ca471a3ca084cb5b07f1144fb1f2bfc1 485 Pfam PF08448 PAS fold 178 276 7.5E-8 T 22-04-2016 IPR013656 PAS fold-4 SRM_RS08500 ca471a3ca084cb5b07f1144fb1f2bfc1 485 Gene3D G3DSA:3.30.565.10 350 482 6.1E-11 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SRM_RS08500 ca471a3ca084cb5b07f1144fb1f2bfc1 485 SMART SM00304 117 169 1.5E-5 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 SRM_RS08500 ca471a3ca084cb5b07f1144fb1f2bfc1 485 Pfam PF13581 Histidine kinase-like ATPase domain 384 443 9.3E-8 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SRM_RS08500 ca471a3ca084cb5b07f1144fb1f2bfc1 485 PANTHER PTHR24423 170 480 8.1E-43 T 22-04-2016 SRM_RS08500 ca471a3ca084cb5b07f1144fb1f2bfc1 485 PANTHER PTHR24423 17 32 8.1E-43 T 22-04-2016 SRM_RS08500 ca471a3ca084cb5b07f1144fb1f2bfc1 485 Pfam PF07568 Histidine kinase 295 370 1.9E-30 T 22-04-2016 IPR011495 Signal transduction histidine kinase, subgroup 2, dimerisation and phosphoacceptor domain SRM_RS08500 ca471a3ca084cb5b07f1144fb1f2bfc1 485 SUPERFAMILY SSF55874 357 481 1.3E-16 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SRM_RS08500 ca471a3ca084cb5b07f1144fb1f2bfc1 485 Pfam PF00672 HAMP domain 100 165 1.1E-11 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 SRM_RS08500 ca471a3ca084cb5b07f1144fb1f2bfc1 485 Gene3D G3DSA:3.30.450.20 170 275 4.4E-14 T 22-04-2016 SRM_RS08500 ca471a3ca084cb5b07f1144fb1f2bfc1 485 PANTHER PTHR24423:SF468 170 480 8.1E-43 T 22-04-2016 SRM_RS08500 ca471a3ca084cb5b07f1144fb1f2bfc1 485 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 170 282 2.5E-9 T 22-04-2016 IPR000014 PAS domain SRM_RS08500 ca471a3ca084cb5b07f1144fb1f2bfc1 485 PANTHER PTHR24423:SF468 17 32 8.1E-43 T 22-04-2016 SRM_RS11870 108db7d6791d183892e4b5f3e2c5d6b7 978 PANTHER PTHR16214 301 347 1.2E-139 T 22-04-2016 SRM_RS11870 108db7d6791d183892e4b5f3e2c5d6b7 978 PANTHER PTHR16214 390 494 1.2E-139 T 22-04-2016 SRM_RS11870 108db7d6791d183892e4b5f3e2c5d6b7 978 PANTHER PTHR16214 698 948 1.2E-139 T 22-04-2016 SRM_RS11870 108db7d6791d183892e4b5f3e2c5d6b7 978 PANTHER PTHR16214 4 241 1.2E-139 T 22-04-2016 SRM_RS11870 108db7d6791d183892e4b5f3e2c5d6b7 978 PANTHER PTHR16214 510 643 1.2E-139 T 22-04-2016 SRM_RS11870 108db7d6791d183892e4b5f3e2c5d6b7 978 PANTHER PTHR16214:SF2 301 347 1.2E-139 T 22-04-2016 SRM_RS11870 108db7d6791d183892e4b5f3e2c5d6b7 978 PANTHER PTHR16214:SF2 390 494 1.2E-139 T 22-04-2016 SRM_RS11870 108db7d6791d183892e4b5f3e2c5d6b7 978 PANTHER PTHR16214:SF2 698 948 1.2E-139 T 22-04-2016 SRM_RS11870 108db7d6791d183892e4b5f3e2c5d6b7 978 PANTHER PTHR16214:SF2 4 241 1.2E-139 T 22-04-2016 SRM_RS11870 108db7d6791d183892e4b5f3e2c5d6b7 978 PANTHER PTHR16214:SF2 510 643 1.2E-139 T 22-04-2016 SRM_RS11870 108db7d6791d183892e4b5f3e2c5d6b7 978 Pfam PF11028 Protein of unknown function (DUF2723) 34 222 1.0E-55 T 22-04-2016 IPR021280 Protein of unknown function DUF2723 SRM_RS05065 5f20f377543b013d7781f69d424416fa 396 PANTHER PTHR11014 1 394 1.1E-132 T 22-04-2016 SRM_RS05065 5f20f377543b013d7781f69d424416fa 396 PANTHER PTHR11014:SF63 1 394 1.1E-132 T 22-04-2016 SRM_RS05065 5f20f377543b013d7781f69d424416fa 396 PIRSF PIRSF005962 1 394 1.7E-118 T 22-04-2016 IPR017439 Amidohydrolase GO:0016787 SRM_RS05065 5f20f377543b013d7781f69d424416fa 396 Gene3D G3DSA:3.30.70.360 189 305 4.4E-36 T 22-04-2016 IPR011650 Peptidase M20, dimerisation domain SRM_RS05065 5f20f377543b013d7781f69d424416fa 396 TIGRFAM TIGR01891 amidohydrolases: amidohydrolase 17 378 3.5E-101 T 22-04-2016 IPR017439 Amidohydrolase GO:0016787 SRM_RS05065 5f20f377543b013d7781f69d424416fa 396 Gene3D G3DSA:3.40.630.10 306 390 7.7E-98 T 22-04-2016 SRM_RS05065 5f20f377543b013d7781f69d424416fa 396 Gene3D G3DSA:3.40.630.10 2 186 7.7E-98 T 22-04-2016 SRM_RS05065 5f20f377543b013d7781f69d424416fa 396 SUPERFAMILY SSF53187 306 389 1.57E-82 T 22-04-2016 SRM_RS05065 5f20f377543b013d7781f69d424416fa 396 SUPERFAMILY SSF53187 4 205 1.57E-82 T 22-04-2016 SRM_RS05065 5f20f377543b013d7781f69d424416fa 396 Pfam PF01546 Peptidase family M20/M25/M40 74 386 4.2E-29 T 22-04-2016 IPR002933 Peptidase M20 GO:0008152|GO:0016787 SRM_RS05065 5f20f377543b013d7781f69d424416fa 396 Pfam PF07687 Peptidase dimerisation domain 195 285 3.9E-7 T 22-04-2016 IPR011650 Peptidase M20, dimerisation domain SRM_RS05065 5f20f377543b013d7781f69d424416fa 396 SUPERFAMILY SSF55031 189 306 3.49E-26 T 22-04-2016 IPR011650 Peptidase M20, dimerisation domain SRM_RS09710 d90cf5693eca95f69d5e6e0c7a4a9579 655 PANTHER PTHR34218 55 178 6.4E-21 T 22-04-2016 SRM_RS09710 d90cf5693eca95f69d5e6e0c7a4a9579 655 SUPERFAMILY SSF56235 41 577 8.23E-54 T 22-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal SRM_RS09710 d90cf5693eca95f69d5e6e0c7a4a9579 655 Gene3D G3DSA:1.10.1400.10 435 493 4.7E-6 T 22-04-2016 SRM_RS09710 d90cf5693eca95f69d5e6e0c7a4a9579 655 Gene3D G3DSA:1.10.439.10 40 179 1.9E-30 T 22-04-2016 IPR023343 Penicillin amidase type, domain1 GO:0016811 SRM_RS09710 d90cf5693eca95f69d5e6e0c7a4a9579 655 Pfam PF01804 Penicillin amidase 46 408 4.5E-28 T 22-04-2016 IPR002692 Penicillin/cephalosporin acylase GO:0016787|GO:0017000 SRM_RS09710 d90cf5693eca95f69d5e6e0c7a4a9579 655 Pfam PF01804 Penicillin amidase 428 539 4.4E-9 T 22-04-2016 IPR002692 Penicillin/cephalosporin acylase GO:0016787|GO:0017000 SRM_RS09710 d90cf5693eca95f69d5e6e0c7a4a9579 655 PANTHER PTHR34218:SF2 55 178 6.4E-21 T 22-04-2016 SRM_RS07335 70de7ea77a88552e02076d5d176f84b8 145 PANTHER PTHR34352 1 134 1.2E-34 T 22-04-2016 SRM_RS07335 70de7ea77a88552e02076d5d176f84b8 145 Pfam PF02566 OsmC-like protein 29 125 9.0E-19 T 22-04-2016 IPR003718 OsmC/Ohr family SRM_RS07335 70de7ea77a88552e02076d5d176f84b8 145 Gene3D G3DSA:3.30.300.20 35 131 1.4E-34 T 22-04-2016 IPR015946 K homology domain-like, alpha/beta SRM_RS07335 70de7ea77a88552e02076d5d176f84b8 145 SUPERFAMILY SSF82784 4 131 1.7E-30 T 22-04-2016 IPR003718 OsmC/Ohr family SRM_RS08010 98a640fb32badb3288fac01682661c4f 591 TIGRFAM TIGR00173 menD: 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthase 18 462 2.7E-140 T 22-04-2016 IPR004433 Menaquinone biosynthesis protein MenD GO:0009234|GO:0030976|GO:0070204 KEGG: 00130+2.2.1.9|MetaCyc: PWY-5837|UniPathway: UPA00079|UniPathway: UPA01057 SRM_RS08010 98a640fb32badb3288fac01682661c4f 591 PANTHER PTHR18968:SF114 1 589 1.4E-179 T 22-04-2016 SRM_RS08010 98a640fb32badb3288fac01682661c4f 591 SUPERFAMILY SSF52518 395 584 3.3E-28 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold SRM_RS08010 98a640fb32badb3288fac01682661c4f 591 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 447 566 1.6E-6 T 22-04-2016 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 SRM_RS08010 98a640fb32badb3288fac01682661c4f 591 Hamap MF_01659 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate synthase [menD]. 12 584 35.21 T 22-04-2016 IPR004433 Menaquinone biosynthesis protein MenD GO:0009234|GO:0030976|GO:0070204 KEGG: 00130+2.2.1.9|MetaCyc: PWY-5837|UniPathway: UPA00079|UniPathway: UPA01057 SRM_RS08010 98a640fb32badb3288fac01682661c4f 591 Pfam PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain 19 189 2.4E-34 T 22-04-2016 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain GO:0030976 SRM_RS08010 98a640fb32badb3288fac01682661c4f 591 Gene3D G3DSA:3.40.50.970 372 577 5.3E-29 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold SRM_RS08010 98a640fb32badb3288fac01682661c4f 591 PANTHER PTHR18968 1 589 1.4E-179 T 22-04-2016 SRM_RS08010 98a640fb32badb3288fac01682661c4f 591 Pfam PF16582 Middle domain of thiamine pyrophosphate 199 417 2.8E-22 T 22-04-2016 IPR032264 Menaquinone biosynthesis protein MenD, middle domain KEGG: 00130+2.2.1.9|MetaCyc: PWY-5837|UniPathway: UPA00079|UniPathway: UPA01057 SRM_RS08010 98a640fb32badb3288fac01682661c4f 591 Gene3D G3DSA:3.40.50.970 15 193 1.8E-55 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold SRM_RS08010 98a640fb32badb3288fac01682661c4f 591 SUPERFAMILY SSF52467 213 384 5.72E-11 T 22-04-2016 IPR029035 DHS-like NAD/FAD-binding domain SRM_RS08010 98a640fb32badb3288fac01682661c4f 591 PIRSF PIRSF004983 10 590 8.6E-162 T 22-04-2016 IPR004433 Menaquinone biosynthesis protein MenD GO:0009234|GO:0030976|GO:0070204 KEGG: 00130+2.2.1.9|MetaCyc: PWY-5837|UniPathway: UPA00079|UniPathway: UPA01057 SRM_RS08010 98a640fb32badb3288fac01682661c4f 591 SUPERFAMILY SSF52518 14 194 1.08E-41 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold SRM_RS02515 c521fb495494d013c910754f6ceada26 269 Pfam PF07702 UTRA domain 94 231 5.4E-31 T 22-04-2016 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 SRM_RS02515 c521fb495494d013c910754f6ceada26 269 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 46 62 5.0E-9 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 SRM_RS02515 c521fb495494d013c910754f6ceada26 269 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 32 46 5.0E-9 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 SRM_RS02515 c521fb495494d013c910754f6ceada26 269 SUPERFAMILY SSF46785 2 76 2.77E-22 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SRM_RS02515 c521fb495494d013c910754f6ceada26 269 Pfam PF00392 Bacterial regulatory proteins, gntR family 11 72 3.2E-17 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 SRM_RS02515 c521fb495494d013c910754f6ceada26 269 SUPERFAMILY SSF64288 61 239 3.3E-42 T 22-04-2016 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain SRM_RS02515 c521fb495494d013c910754f6ceada26 269 Gene3D G3DSA:3.40.1410.10 70 238 2.7E-42 T 22-04-2016 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain SRM_RS02515 c521fb495494d013c910754f6ceada26 269 PANTHER PTHR11751 121 144 5.0E-29 T 22-04-2016 SRM_RS02515 c521fb495494d013c910754f6ceada26 269 PANTHER PTHR11751 8 75 5.0E-29 T 22-04-2016 SRM_RS02515 c521fb495494d013c910754f6ceada26 269 SMART SM00866 93 232 6.3E-31 T 22-04-2016 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 SRM_RS02515 c521fb495494d013c910754f6ceada26 269 PANTHER PTHR11751:SF333 121 144 5.0E-29 T 22-04-2016 SRM_RS02515 c521fb495494d013c910754f6ceada26 269 PANTHER PTHR11751:SF333 8 75 5.0E-29 T 22-04-2016 SRM_RS02515 c521fb495494d013c910754f6ceada26 269 Gene3D G3DSA:1.10.10.10 4 69 1.1E-25 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SRM_RS02515 c521fb495494d013c910754f6ceada26 269 SMART SM00345 13 72 2.7E-19 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 SRM_RS15705 82f41a499674170a22a36b856d49b64b 470 Pfam PF02321 Outer membrane efflux protein 43 233 1.2E-23 T 22-04-2016 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 SRM_RS15705 82f41a499674170a22a36b856d49b64b 470 Pfam PF02321 Outer membrane efflux protein 262 452 5.6E-35 T 22-04-2016 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 SRM_RS15705 82f41a499674170a22a36b856d49b64b 470 SUPERFAMILY SSF56954 14 458 1.83E-80 T 22-04-2016 SRM_RS15705 82f41a499674170a22a36b856d49b64b 470 Gene3D G3DSA:1.20.1600.10 32 458 2.7E-76 T 22-04-2016 SRM_RS15705 82f41a499674170a22a36b856d49b64b 470 PANTHER PTHR30026 35 460 5.7E-48 T 22-04-2016 SRM_RS15705 82f41a499674170a22a36b856d49b64b 470 PANTHER PTHR30026:SF4 35 460 5.7E-48 T 22-04-2016 SRM_RS13615 0475225a840bc3b18250dfdff5832c32 408 Gene3D G3DSA:3.30.9.10 90 139 3.8E-6 T 22-04-2016 SRM_RS13615 0475225a840bc3b18250dfdff5832c32 408 ProSitePatterns PS00977 FAD-dependent glycerol-3-phosphate dehydrogenase signature 1. 10 27 - T 22-04-2016 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952 SRM_RS13615 0475225a840bc3b18250dfdff5832c32 408 SUPERFAMILY SSF51905 7 312 1.91E-35 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SRM_RS13615 0475225a840bc3b18250dfdff5832c32 408 ProSitePatterns PS00978 FAD-dependent glycerol-3-phosphate dehydrogenase signature 2. 343 353 - T 22-04-2016 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952 SRM_RS13615 0475225a840bc3b18250dfdff5832c32 408 Gene3D G3DSA:3.30.9.10 209 307 6.7E-14 T 22-04-2016 SRM_RS13615 0475225a840bc3b18250dfdff5832c32 408 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 34 46 1.2E-18 T 22-04-2016 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952 SRM_RS13615 0475225a840bc3b18250dfdff5832c32 408 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 5 17 1.2E-18 T 22-04-2016 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952 SRM_RS13615 0475225a840bc3b18250dfdff5832c32 408 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 338 350 1.2E-18 T 22-04-2016 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952 SRM_RS13615 0475225a840bc3b18250dfdff5832c32 408 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 302 308 1.2E-18 T 22-04-2016 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952 SRM_RS13615 0475225a840bc3b18250dfdff5832c32 408 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 18 28 1.2E-18 T 22-04-2016 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952 SRM_RS13615 0475225a840bc3b18250dfdff5832c32 408 PANTHER PTHR11985 7 388 3.0E-127 T 22-04-2016 SRM_RS13615 0475225a840bc3b18250dfdff5832c32 408 Gene3D G3DSA:3.50.50.60 140 208 8.9E-30 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SRM_RS13615 0475225a840bc3b18250dfdff5832c32 408 Gene3D G3DSA:3.50.50.60 1 89 8.9E-30 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SRM_RS13615 0475225a840bc3b18250dfdff5832c32 408 PANTHER PTHR11985:SF14 7 388 3.0E-127 T 22-04-2016 SRM_RS13615 0475225a840bc3b18250dfdff5832c32 408 Pfam PF01266 FAD dependent oxidoreductase 7 319 3.1E-47 T 22-04-2016 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 SRM_RS03740 5196d619b202971ea46eaca529bda528 475 SUPERFAMILY SSF51984 14 100 1.96E-24 T 22-04-2016 SRM_RS03740 5196d619b202971ea46eaca529bda528 475 TIGRFAM TIGR01082 murC: UDP-N-acetylmuramate--L-alanine ligase 15 460 3.8E-161 T 22-04-2016 IPR005758 UDP-N-acetylmuramate--L-alanine ligase GO:0008763|GO:0009252 KEGG: 00471+6.3.2.8|KEGG: 00550+6.3.2.8|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 SRM_RS03740 5196d619b202971ea46eaca529bda528 475 Gene3D G3DSA:3.90.190.20 320 465 3.0E-55 T 22-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 SRM_RS03740 5196d619b202971ea46eaca529bda528 475 Hamap MF_00046 UDP-N-acetylmuramate--L-alanine ligase [murC]. 13 466 41.624 T 22-04-2016 IPR005758 UDP-N-acetylmuramate--L-alanine ligase GO:0008763|GO:0009252 KEGG: 00471+6.3.2.8|KEGG: 00550+6.3.2.8|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 SRM_RS03740 5196d619b202971ea46eaca529bda528 475 SUPERFAMILY SSF53244 317 463 4.06E-49 T 22-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 SRM_RS03740 5196d619b202971ea46eaca529bda528 475 Gene3D G3DSA:3.40.50.720 14 101 5.2E-33 T 22-04-2016 IPR016040 NAD(P)-binding domain SRM_RS03740 5196d619b202971ea46eaca529bda528 475 SUPERFAMILY SSF53623 100 315 5.23E-67 T 22-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 SRM_RS03740 5196d619b202971ea46eaca529bda528 475 PANTHER PTHR23135 8 453 2.2E-198 T 22-04-2016 SRM_RS03740 5196d619b202971ea46eaca529bda528 475 Pfam PF01225 Mur ligase family, catalytic domain 15 113 3.8E-25 T 22-04-2016 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 UniPathway: UPA00219 SRM_RS03740 5196d619b202971ea46eaca529bda528 475 Gene3D G3DSA:3.40.1190.10 103 319 5.3E-79 T 22-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 SRM_RS03740 5196d619b202971ea46eaca529bda528 475 PANTHER PTHR23135:SF5 8 453 2.2E-198 T 22-04-2016 SRM_RS03740 5196d619b202971ea46eaca529bda528 475 Pfam PF08245 Mur ligase middle domain 119 297 3.7E-27 T 22-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 SRM_RS03740 5196d619b202971ea46eaca529bda528 475 Pfam PF02875 Mur ligase family, glutamate ligase domain 318 404 2.2E-23 T 22-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 SRM_RS12150 45c226693a3118b54d63cf6c6076bce1 596 TIGRFAM TIGR00118 acolac_lg: acetolactate synthase, large subunit, biosynthetic type 25 585 1.3E-226 T 22-04-2016 IPR012846 Acetolactate synthase, large subunit, biosynthetic GO:0000287|GO:0003984|GO:0009082|GO:0030976|GO:0050660 KEGG: 00290+2.2.1.6|KEGG: 00650+2.2.1.6|KEGG: 00660+2.2.1.6|KEGG: 00770+2.2.1.6|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5938|MetaCyc: PWY-5939|MetaCyc: PWY-6389|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 SRM_RS12150 45c226693a3118b54d63cf6c6076bce1 596 SUPERFAMILY SSF52518 25 199 8.94E-59 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold SRM_RS12150 45c226693a3118b54d63cf6c6076bce1 596 Gene3D G3DSA:3.40.50.970 378 591 6.0E-69 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold SRM_RS12150 45c226693a3118b54d63cf6c6076bce1 596 Pfam PF00205 Thiamine pyrophosphate enzyme, central domain 216 351 1.7E-44 T 22-04-2016 IPR012000 Thiamine pyrophosphate enzyme, central domain GO:0000287|GO:0030976 SRM_RS12150 45c226693a3118b54d63cf6c6076bce1 596 SUPERFAMILY SSF52467 213 375 8.36E-61 T 22-04-2016 IPR029035 DHS-like NAD/FAD-binding domain SRM_RS12150 45c226693a3118b54d63cf6c6076bce1 596 SUPERFAMILY SSF52518 385 586 1.38E-62 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold SRM_RS12150 45c226693a3118b54d63cf6c6076bce1 596 Gene3D G3DSA:3.40.50.970 26 198 2.9E-69 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold SRM_RS12150 45c226693a3118b54d63cf6c6076bce1 596 PANTHER PTHR18968:SF116 5 595 1.2E-282 T 22-04-2016 SRM_RS12150 45c226693a3118b54d63cf6c6076bce1 596 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 409 561 4.2E-43 T 22-04-2016 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 SRM_RS12150 45c226693a3118b54d63cf6c6076bce1 596 Gene3D G3DSA:3.40.50.1220 210 373 5.0E-63 T 22-04-2016 IPR029035 DHS-like NAD/FAD-binding domain SRM_RS12150 45c226693a3118b54d63cf6c6076bce1 596 PANTHER PTHR18968 5 595 1.2E-282 T 22-04-2016 SRM_RS12150 45c226693a3118b54d63cf6c6076bce1 596 Pfam PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain 26 192 1.9E-53 T 22-04-2016 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain GO:0030976 SRM_RS00860 45d4f560a71e8dc32effb37b2c11370b 874 SUPERFAMILY SSF51294 254 429 3.14E-41 T 22-04-2016 IPR028992 Hedgehog/Intein (Hint) domain SRM_RS00860 45d4f560a71e8dc32effb37b2c11370b 874 SUPERFAMILY SSF51294 562 601 3.14E-41 T 22-04-2016 IPR028992 Hedgehog/Intein (Hint) domain SRM_RS00860 45d4f560a71e8dc32effb37b2c11370b 874 Gene3D G3DSA:3.10.28.10 457 550 9.8E-20 T 22-04-2016 IPR027434 Homing endonuclease GO:0004519 SRM_RS00860 45d4f560a71e8dc32effb37b2c11370b 874 PANTHER PTHR30153 599 843 1.9E-178 T 22-04-2016 SRM_RS00860 45d4f560a71e8dc32effb37b2c11370b 874 PANTHER PTHR30153 32 254 1.9E-178 T 22-04-2016 SRM_RS00860 45d4f560a71e8dc32effb37b2c11370b 874 Gene3D G3DSA:3.40.50.300 208 255 2.6E-96 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SRM_RS00860 45d4f560a71e8dc32effb37b2c11370b 874 Gene3D G3DSA:3.40.50.300 606 834 2.6E-96 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SRM_RS00860 45d4f560a71e8dc32effb37b2c11370b 874 TIGRFAM TIGR00665 DnaB: replicative DNA helicase 48 835 9.4E-164 T 22-04-2016 IPR007692 DNA helicase, DnaB type GO:0003677|GO:0003678|GO:0005524|GO:0006260 SRM_RS00860 45d4f560a71e8dc32effb37b2c11370b 874 Gene3D G3DSA:2.170.16.10 256 396 2.3E-31 T 22-04-2016 IPR028992 Hedgehog/Intein (Hint) domain SRM_RS00860 45d4f560a71e8dc32effb37b2c11370b 874 Gene3D G3DSA:1.10.860.10 48 150 9.0E-35 T 22-04-2016 IPR016136 DNA helicase DnaB, N-terminal/DNA primase DnaG, C-terminal SRM_RS00860 45d4f560a71e8dc32effb37b2c11370b 874 Pfam PF14528 LAGLIDADG-like domain 471 539 2.6E-7 T 22-04-2016 IPR004860 Homing endonuclease, LAGLIDADG GO:0004519 SRM_RS00860 45d4f560a71e8dc32effb37b2c11370b 874 Pfam PF00772 DnaB-like helicase N terminal domain 48 149 3.4E-33 T 22-04-2016 IPR007693 DNA helicase, DnaB-like, N-terminal GO:0003678|GO:0005524|GO:0006260 SRM_RS00860 45d4f560a71e8dc32effb37b2c11370b 874 Pfam PF03796 DnaB-like helicase C terminal domain 223 255 1.9E-10 T 22-04-2016 IPR007694 DNA helicase, DnaB-like, C-terminal GO:0003678|GO:0005524|GO:0006260 SRM_RS00860 45d4f560a71e8dc32effb37b2c11370b 874 Pfam PF03796 DnaB-like helicase C terminal domain 598 832 1.9E-93 T 22-04-2016 IPR007694 DNA helicase, DnaB-like, C-terminal GO:0003678|GO:0005524|GO:0006260 SRM_RS00860 45d4f560a71e8dc32effb37b2c11370b 874 SUPERFAMILY SSF52540 599 827 1.59E-34 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SRM_RS00860 45d4f560a71e8dc32effb37b2c11370b 874 SUPERFAMILY SSF48024 46 158 1.96E-33 T 22-04-2016 IPR007693 DNA helicase, DnaB-like, N-terminal GO:0003678|GO:0005524|GO:0006260 SRM_RS00860 45d4f560a71e8dc32effb37b2c11370b 874 SUPERFAMILY SSF55608 452 540 3.36E-16 T 22-04-2016 IPR027434 Homing endonuclease GO:0004519 SRM_RS00860 45d4f560a71e8dc32effb37b2c11370b 874 Pfam PF05203 Hom_end-associated Hint 255 327 4.1E-21 T 22-04-2016 IPR007868 Hom-end-associated Hint GO:0030908 SRM_RS15180 2612101f7c50b8f69804e93857805edc 845 SUPERFAMILY SSF52540 15 160 7.58E-24 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SRM_RS15180 2612101f7c50b8f69804e93857805edc 845 PANTHER PTHR18934 3 453 1.4E-156 T 22-04-2016 SRM_RS15180 2612101f7c50b8f69804e93857805edc 845 Pfam PF04408 Helicase associated domain (HA2) 392 469 1.4E-16 T 22-04-2016 IPR007502 Helicase-associated domain GO:0004386 SRM_RS15180 2612101f7c50b8f69804e93857805edc 845 PIRSF PIRSF005496 1 842 0.0 T 22-04-2016 IPR010225 RNA helicase, ATP-dependent DEAH box, HrpB-type SRM_RS15180 2612101f7c50b8f69804e93857805edc 845 SMART SM00847 391 488 4.5E-19 T 22-04-2016 IPR007502 Helicase-associated domain GO:0004386 SRM_RS15180 2612101f7c50b8f69804e93857805edc 845 Pfam PF08482 ATP-dependent helicase C-terminal 696 828 6.4E-54 T 22-04-2016 IPR013689 ATP-dependent RNA helicase HrpB, C-terminal SRM_RS15180 2612101f7c50b8f69804e93857805edc 845 Gene3D G3DSA:3.40.50.300 4 161 3.5E-45 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SRM_RS15180 2612101f7c50b8f69804e93857805edc 845 SMART SM00490 229 331 2.0E-14 T 22-04-2016 IPR001650 Helicase, C-terminal SRM_RS15180 2612101f7c50b8f69804e93857805edc 845 Gene3D G3DSA:3.40.50.300 206 347 2.2E-13 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SRM_RS15180 2612101f7c50b8f69804e93857805edc 845 TIGRFAM TIGR01970 DEAH_box_HrpB: ATP-dependent helicase HrpB 4 840 0.0 T 22-04-2016 IPR010225 RNA helicase, ATP-dependent DEAH box, HrpB-type SRM_RS15180 2612101f7c50b8f69804e93857805edc 845 SUPERFAMILY SSF52540 179 457 3.55E-51 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SRM_RS15180 2612101f7c50b8f69804e93857805edc 845 SMART SM00487 2 187 6.1E-12 T 22-04-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain SRM_RS15180 2612101f7c50b8f69804e93857805edc 845 Pfam PF00270 DEAD/DEAH box helicase 19 161 1.9E-6 T 22-04-2016 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 SRM_RS15180 2612101f7c50b8f69804e93857805edc 845 Pfam PF00271 Helicase conserved C-terminal domain 208 330 1.1E-10 T 22-04-2016 IPR001650 Helicase, C-terminal SRM_RS03805 d572ba1fe25bfb49c94ab7c9f11dac2f 452 Gene3D G3DSA:3.40.50.2000 241 434 2.4E-73 T 22-04-2016 SRM_RS03805 d572ba1fe25bfb49c94ab7c9f11dac2f 452 SUPERFAMILY SSF53756 2 451 4.33E-139 T 22-04-2016 SRM_RS03805 d572ba1fe25bfb49c94ab7c9f11dac2f 452 Pfam PF00982 Glycosyltransferase family 20 6 451 1.4E-140 T 22-04-2016 IPR001830 Glycosyl transferase, family 20 GO:0003824|GO:0005992 SRM_RS03805 d572ba1fe25bfb49c94ab7c9f11dac2f 452 PANTHER PTHR10788:SF6 3 452 1.9E-169 T 22-04-2016 SRM_RS03805 d572ba1fe25bfb49c94ab7c9f11dac2f 452 Gene3D G3DSA:3.40.50.2000 2 240 7.7E-80 T 22-04-2016 SRM_RS03805 d572ba1fe25bfb49c94ab7c9f11dac2f 452 PANTHER PTHR10788 3 452 1.9E-169 T 22-04-2016 SRM_RS07130 9fcd0dcba8d521bc49748d32dee64f47 453 PANTHER PTHR30469 37 330 1.2E-49 T 22-04-2016 SRM_RS07130 9fcd0dcba8d521bc49748d32dee64f47 453 PANTHER PTHR30469 353 408 1.2E-49 T 22-04-2016 SRM_RS07130 9fcd0dcba8d521bc49748d32dee64f47 453 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 63 292 1.2E-23 T 22-04-2016 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain SRM_RS07130 9fcd0dcba8d521bc49748d32dee64f47 453 SUPERFAMILY SSF111369 55 299 8.37E-27 T 22-04-2016 SRM_RS07130 9fcd0dcba8d521bc49748d32dee64f47 453 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 40 318 5.3E-47 T 22-04-2016 IPR006143 RND efflux pump, membrane fusion protein GO:0016020|GO:0055085 SRM_RS07130 9fcd0dcba8d521bc49748d32dee64f47 453 Gene3D G3DSA:2.40.50.100 65 96 2.2E-12 T 22-04-2016 SRM_RS07130 9fcd0dcba8d521bc49748d32dee64f47 453 Gene3D G3DSA:2.40.50.100 187 218 2.2E-12 T 22-04-2016 SRM_RS07130 9fcd0dcba8d521bc49748d32dee64f47 453 Gene3D G3DSA:1.20.1600.10 97 179 5.1E-4 T 22-04-2016 SRM_RS01075 a760b6ba11356af8d4e093cbfafc541c 119 PANTHER PTHR36565 3 119 1.1E-18 T 22-04-2016 SRM_RS01075 a760b6ba11356af8d4e093cbfafc541c 119 PANTHER PTHR36565:SF1 3 119 1.1E-18 T 22-04-2016 SRM_RS01075 a760b6ba11356af8d4e093cbfafc541c 119 Pfam PF05168 HEPN domain 4 111 2.1E-9 T 22-04-2016 IPR007842 HEPN domain SRM_RS01075 a760b6ba11356af8d4e093cbfafc541c 119 Gene3D G3DSA:1.20.120.330 2 116 2.3E-21 T 22-04-2016 SRM_RS13865 ce2340d07f5e0148b6fd3b456bd1b51f 491 Pfam PF00512 His Kinase A (phospho-acceptor) domain 259 326 1.3E-17 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SRM_RS13865 ce2340d07f5e0148b6fd3b456bd1b51f 491 SUPERFAMILY SSF55874 316 484 5.24E-50 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SRM_RS13865 ce2340d07f5e0148b6fd3b456bd1b51f 491 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 377 484 5.8E-27 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SRM_RS13865 ce2340d07f5e0148b6fd3b456bd1b51f 491 Gene3D G3DSA:3.30.565.10 314 485 1.5E-50 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SRM_RS13865 ce2340d07f5e0148b6fd3b456bd1b51f 491 SMART SM00387 373 485 3.8E-43 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SRM_RS13865 ce2340d07f5e0148b6fd3b456bd1b51f 491 SUPERFAMILY SSF158472 199 250 8.37E-9 T 22-04-2016 SRM_RS13865 ce2340d07f5e0148b6fd3b456bd1b51f 491 SMART SM00388 259 327 8.4E-21 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SRM_RS13865 ce2340d07f5e0148b6fd3b456bd1b51f 491 PRINTS PR00344 Bacterial sensor protein C-terminal signature 469 482 2.4E-18 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SRM_RS13865 ce2340d07f5e0148b6fd3b456bd1b51f 491 PRINTS PR00344 Bacterial sensor protein C-terminal signature 410 424 2.4E-18 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SRM_RS13865 ce2340d07f5e0148b6fd3b456bd1b51f 491 PRINTS PR00344 Bacterial sensor protein C-terminal signature 428 438 2.4E-18 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SRM_RS13865 ce2340d07f5e0148b6fd3b456bd1b51f 491 PRINTS PR00344 Bacterial sensor protein C-terminal signature 445 463 2.4E-18 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SRM_RS13865 ce2340d07f5e0148b6fd3b456bd1b51f 491 Pfam PF00672 HAMP domain 180 248 1.0E-13 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 SRM_RS13865 ce2340d07f5e0148b6fd3b456bd1b51f 491 PANTHER PTHR24423 193 490 8.2E-90 T 22-04-2016 SRM_RS13865 ce2340d07f5e0148b6fd3b456bd1b51f 491 PANTHER PTHR24423 41 69 8.2E-90 T 22-04-2016 SRM_RS13865 ce2340d07f5e0148b6fd3b456bd1b51f 491 SMART SM00304 199 251 7.6E-13 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 SRM_RS13865 ce2340d07f5e0148b6fd3b456bd1b51f 491 SUPERFAMILY SSF47384 242 327 4.51E-21 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SRM_RS13865 ce2340d07f5e0148b6fd3b456bd1b51f 491 Gene3D G3DSA:1.10.287.130 250 313 3.2E-20 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SRM_RS13495 2626a231f80bbcb8895486c841a9a631 732 Pfam PF07584 Aerotolerance regulator N-terminal 31 105 1.3E-19 T 22-04-2016 IPR024163 Aerotolerance regulator, N-terminal SRM_RS13495 2626a231f80bbcb8895486c841a9a631 732 PANTHER PTHR37464 31 722 1.2E-66 T 22-04-2016 SRM_RS13495 2626a231f80bbcb8895486c841a9a631 732 SUPERFAMILY SSF52317 340 574 1.99E-18 T 22-04-2016 IPR029062 Class I glutamine amidotransferase-like SRM_RS13495 2626a231f80bbcb8895486c841a9a631 732 TIGRFAM TIGR02226 two_anch: N-terminal double-transmembrane domain 31 109 2.5E-21 T 22-04-2016 IPR011933 Double transmembrane domain SRM_RS13495 2626a231f80bbcb8895486c841a9a631 732 PANTHER PTHR37464:SF1 31 722 1.2E-66 T 22-04-2016 SRM_RS13495 2626a231f80bbcb8895486c841a9a631 732 Gene3D G3DSA:3.40.50.880 336 443 2.0E-7 T 22-04-2016 IPR029062 Class I glutamine amidotransferase-like SRM_RS08320 b2bef28c49ab46b69af3b9f427af7947 285 Gene3D G3DSA:3.10.310.10 4 155 9.5E-38 T 22-04-2016 SRM_RS08320 b2bef28c49ab46b69af3b9f427af7947 285 Pfam PF01678 Diaminopimelate epimerase 11 122 2.8E-23 T 22-04-2016 IPR001653 Diaminopimelate epimerase, DapF GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097|UniPathway: UPA00034 SRM_RS08320 b2bef28c49ab46b69af3b9f427af7947 285 Pfam PF01678 Diaminopimelate epimerase 157 271 3.2E-14 T 22-04-2016 IPR001653 Diaminopimelate epimerase, DapF GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097|UniPathway: UPA00034 SRM_RS08320 b2bef28c49ab46b69af3b9f427af7947 285 TIGRFAM TIGR00652 DapF: diaminopimelate epimerase 10 278 3.9E-63 T 22-04-2016 IPR001653 Diaminopimelate epimerase, DapF GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097|UniPathway: UPA00034 SRM_RS08320 b2bef28c49ab46b69af3b9f427af7947 285 PANTHER PTHR31689 6 284 2.9E-67 T 22-04-2016 IPR001653 Diaminopimelate epimerase, DapF GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097|UniPathway: UPA00034 SRM_RS08320 b2bef28c49ab46b69af3b9f427af7947 285 ProSitePatterns PS01326 Diaminopimelate epimerase signature. 74 88 - T 22-04-2016 IPR018510 Diaminopimelate epimerase, active site GO:0005737|GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097|UniPathway: UPA00034 SRM_RS08320 b2bef28c49ab46b69af3b9f427af7947 285 SUPERFAMILY SSF54506 149 278 6.75E-27 T 22-04-2016 SRM_RS08320 b2bef28c49ab46b69af3b9f427af7947 285 Hamap MF_00197 Diaminopimelate epimerase [dapF]. 9 280 28.801 T 22-04-2016 IPR001653 Diaminopimelate epimerase, DapF GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097|UniPathway: UPA00034 SRM_RS08320 b2bef28c49ab46b69af3b9f427af7947 285 Gene3D G3DSA:3.10.310.10 156 268 2.0E-26 T 22-04-2016 SRM_RS08320 b2bef28c49ab46b69af3b9f427af7947 285 SUPERFAMILY SSF54506 9 119 3.4E-33 T 22-04-2016 SRM_RS05445 5af9f63e6e73db9ecdcde0fae4aa2abb 445 Gene3D G3DSA:3.60.10.10 185 441 2.2E-7 T 22-04-2016 IPR005135 Endonuclease/exonuclease/phosphatase SRM_RS05445 5af9f63e6e73db9ecdcde0fae4aa2abb 445 Gene3D G3DSA:3.60.10.10 64 111 2.2E-7 T 22-04-2016 IPR005135 Endonuclease/exonuclease/phosphatase SRM_RS05445 5af9f63e6e73db9ecdcde0fae4aa2abb 445 Pfam PF03372 Endonuclease/Exonuclease/phosphatase family 70 434 7.5E-25 T 22-04-2016 IPR005135 Endonuclease/exonuclease/phosphatase SRM_RS05445 5af9f63e6e73db9ecdcde0fae4aa2abb 445 SUPERFAMILY SSF56219 196 225 2.88E-20 T 22-04-2016 IPR005135 Endonuclease/exonuclease/phosphatase SRM_RS05445 5af9f63e6e73db9ecdcde0fae4aa2abb 445 SUPERFAMILY SSF56219 64 110 2.88E-20 T 22-04-2016 IPR005135 Endonuclease/exonuclease/phosphatase SRM_RS05445 5af9f63e6e73db9ecdcde0fae4aa2abb 445 SUPERFAMILY SSF56219 260 441 2.88E-20 T 22-04-2016 IPR005135 Endonuclease/exonuclease/phosphatase SRM_RS06215 2df2feae264de80030c6855965700bff 562 Pfam PF00750 tRNA synthetases class I (R) 99 406 5.3E-24 T 22-04-2016 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: REACT_71 SRM_RS06215 2df2feae264de80030c6855965700bff 562 SUPERFAMILY SSF52374 114 454 3.1E-81 T 22-04-2016 SRM_RS06215 2df2feae264de80030c6855965700bff 562 SMART SM01016 3 89 2.9E-26 T 22-04-2016 IPR005148 Arginyl tRNA synthetase N-terminal domain GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: REACT_71 SRM_RS06215 2df2feae264de80030c6855965700bff 562 Pfam PF05746 DALR anticodon binding domain 444 562 2.4E-37 T 22-04-2016 IPR008909 DALR anticodon binding GO:0004814|GO:0005524|GO:0006420 SRM_RS06215 2df2feae264de80030c6855965700bff 562 SUPERFAMILY SSF55190 1 109 1.2E-19 T 22-04-2016 IPR005148 Arginyl tRNA synthetase N-terminal domain GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: REACT_71 SRM_RS06215 2df2feae264de80030c6855965700bff 562 Pfam PF03485 Arginyl tRNA synthetase N terminal domain 5 89 1.4E-20 T 22-04-2016 IPR005148 Arginyl tRNA synthetase N-terminal domain GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: REACT_71 SRM_RS06215 2df2feae264de80030c6855965700bff 562 Gene3D G3DSA:3.30.1360.70 2 107 1.1E-23 T 22-04-2016 IPR005148 Arginyl tRNA synthetase N-terminal domain GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: REACT_71 SRM_RS06215 2df2feae264de80030c6855965700bff 562 Gene3D G3DSA:1.10.730.10 450 562 4.8E-45 T 22-04-2016 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 SRM_RS06215 2df2feae264de80030c6855965700bff 562 Gene3D G3DSA:3.40.50.620 112 449 4.8E-96 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold SRM_RS06215 2df2feae264de80030c6855965700bff 562 PRINTS PR01038 Arginyl-tRNA synthetase signature 157 170 1.2E-18 T 22-04-2016 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: REACT_71 SRM_RS06215 2df2feae264de80030c6855965700bff 562 PRINTS PR01038 Arginyl-tRNA synthetase signature 313 334 1.2E-18 T 22-04-2016 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: REACT_71 SRM_RS06215 2df2feae264de80030c6855965700bff 562 PRINTS PR01038 Arginyl-tRNA synthetase signature 118 133 1.2E-18 T 22-04-2016 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: REACT_71 SRM_RS06215 2df2feae264de80030c6855965700bff 562 PRINTS PR01038 Arginyl-tRNA synthetase signature 133 149 1.2E-18 T 22-04-2016 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: REACT_71 SRM_RS06215 2df2feae264de80030c6855965700bff 562 TIGRFAM TIGR00456 argS: arginine--tRNA ligase 1 562 5.4E-125 T 22-04-2016 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: REACT_71 SRM_RS06215 2df2feae264de80030c6855965700bff 562 Hamap MF_00123 Arginine--tRNA ligase [argS]. 3 562 26.324 T 22-04-2016 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: REACT_71 SRM_RS06215 2df2feae264de80030c6855965700bff 562 PANTHER PTHR11956 204 562 5.2E-193 T 22-04-2016 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: REACT_71 SRM_RS06215 2df2feae264de80030c6855965700bff 562 PANTHER PTHR11956 1 188 5.2E-193 T 22-04-2016 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: REACT_71 SRM_RS06215 2df2feae264de80030c6855965700bff 562 PANTHER PTHR11956:SF6 204 562 5.2E-193 T 22-04-2016 SRM_RS06215 2df2feae264de80030c6855965700bff 562 PANTHER PTHR11956:SF6 1 188 5.2E-193 T 22-04-2016 SRM_RS06215 2df2feae264de80030c6855965700bff 562 SUPERFAMILY SSF47323 439 562 4.05E-39 T 22-04-2016 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 SRM_RS06215 2df2feae264de80030c6855965700bff 562 SMART SM00836 444 562 1.2E-58 T 22-04-2016 IPR008909 DALR anticodon binding GO:0004814|GO:0005524|GO:0006420 SRM_RS09190 70ce85381fdca095d0b862bc88525ea9 68 SUPERFAMILY SSF47729 5 65 2.8E-10 T 22-04-2016 IPR010992 Integration host factor (IHF)-like DNA-binding domain GO:0003677 SRM_RS09190 70ce85381fdca095d0b862bc88525ea9 68 Pfam PF00216 Bacterial DNA-binding protein 5 65 1.3E-9 T 22-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 SRM_RS09190 70ce85381fdca095d0b862bc88525ea9 68 Gene3D G3DSA:4.10.520.10 5 65 1.5E-9 T 22-04-2016 IPR010992 Integration host factor (IHF)-like DNA-binding domain GO:0003677 SRM_RS02290 f3262ec19628fa36e3cb1762b7d902f4 540 PANTHER PTHR11819:SF7 9 500 1.2E-143 T 22-04-2016 SRM_RS02290 f3262ec19628fa36e3cb1762b7d902f4 540 TIGRFAM TIGR00813 sss: transporter, solute:sodium symporter (SSS) family 44 459 7.9E-106 T 22-04-2016 IPR001734 Sodium/solute symporter GO:0005215|GO:0006810|GO:0016020|GO:0055085 SRM_RS02290 f3262ec19628fa36e3cb1762b7d902f4 540 Pfam PF00474 Sodium:solute symporter family 44 458 4.4E-71 T 22-04-2016 IPR001734 Sodium/solute symporter GO:0005215|GO:0006810|GO:0016020|GO:0055085 SRM_RS02290 f3262ec19628fa36e3cb1762b7d902f4 540 ProSitePatterns PS00456 Sodium:solute symporter family signature 1. 159 184 - T 22-04-2016 IPR018212 Sodium/solute symporter, conserved site GO:0005215|GO:0006810|GO:0016020 SRM_RS02290 f3262ec19628fa36e3cb1762b7d902f4 540 PANTHER PTHR11819 9 500 1.2E-143 T 22-04-2016 IPR001734 Sodium/solute symporter GO:0005215|GO:0006810|GO:0016020|GO:0055085 SRM_RS12575 4a631d04bb6c77d8495d39c74691e632 336 SMART SM00244 30 188 2.9E-53 T 22-04-2016 IPR001107 Band 7 domain SRM_RS12575 4a631d04bb6c77d8495d39c74691e632 336 SUPERFAMILY SSF117892 61 195 1.14E-39 T 22-04-2016 IPR001107 Band 7 domain SRM_RS12575 4a631d04bb6c77d8495d39c74691e632 336 Pfam PF01145 SPFH domain / Band 7 family 35 203 1.5E-27 T 22-04-2016 IPR001107 Band 7 domain SRM_RS12575 4a631d04bb6c77d8495d39c74691e632 336 PRINTS PR00721 Stomatin signature 120 137 4.8E-26 T 22-04-2016 IPR001972 Stomatin family GO:0016020 SRM_RS12575 4a631d04bb6c77d8495d39c74691e632 336 PRINTS PR00721 Stomatin signature 164 182 4.8E-26 T 22-04-2016 IPR001972 Stomatin family GO:0016020 SRM_RS12575 4a631d04bb6c77d8495d39c74691e632 336 PRINTS PR00721 Stomatin signature 85 106 4.8E-26 T 22-04-2016 IPR001972 Stomatin family GO:0016020 SRM_RS12575 4a631d04bb6c77d8495d39c74691e632 336 PRINTS PR00721 Stomatin signature 183 204 4.8E-26 T 22-04-2016 IPR001972 Stomatin family GO:0016020 SRM_RS12575 4a631d04bb6c77d8495d39c74691e632 336 PRINTS PR00721 Stomatin signature 140 163 4.8E-26 T 22-04-2016 IPR001972 Stomatin family GO:0016020 SRM_RS12575 4a631d04bb6c77d8495d39c74691e632 336 PANTHER PTHR10264 8 295 5.5E-115 T 22-04-2016 IPR001972 Stomatin family GO:0016020 SRM_RS12575 4a631d04bb6c77d8495d39c74691e632 336 Gene3D G3DSA:1.10.1200.10 135 208 0.001 T 22-04-2016 IPR009081 Phosphopantetheine binding ACP domain SRM_RS12575 4a631d04bb6c77d8495d39c74691e632 336 Pfam PF16200 C-terminal region of band_7 253 304 7.3E-14 T 22-04-2016 IPR032435 Band 7, C-terminal extension SRM_RS12575 4a631d04bb6c77d8495d39c74691e632 336 PANTHER PTHR10264:SF27 8 295 5.5E-115 T 22-04-2016 SRM_RS13080 19171ec3d824d804e68d18283095e350 537 Gene3D G3DSA:1.10.579.10 326 517 2.4E-50 T 22-04-2016 SRM_RS13080 19171ec3d824d804e68d18283095e350 537 Gene3D G3DSA:3.40.50.620 44 189 1.1E-33 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold SRM_RS13080 19171ec3d824d804e68d18283095e350 537 Gene3D G3DSA:1.25.40.80 190 325 2.2E-19 T 22-04-2016 SRM_RS13080 19171ec3d824d804e68d18283095e350 537 PRINTS PR00147 DNA photolyase signature 365 381 8.7E-7 T 22-04-2016 IPR002081 Cryptochrome/DNA photolyase class 1 SRM_RS13080 19171ec3d824d804e68d18283095e350 537 PRINTS PR00147 DNA photolyase signature 385 403 8.7E-7 T 22-04-2016 IPR002081 Cryptochrome/DNA photolyase class 1 SRM_RS13080 19171ec3d824d804e68d18283095e350 537 Pfam PF03441 FAD binding domain of DNA photolyase 315 513 6.9E-53 T 22-04-2016 IPR005101 Cryptochrome/DNA photolyase, FAD-binding domain SRM_RS13080 19171ec3d824d804e68d18283095e350 537 PANTHER PTHR11455 50 532 7.1E-175 T 22-04-2016 SRM_RS13080 19171ec3d824d804e68d18283095e350 537 SUPERFAMILY SSF48173 233 518 7.33E-75 T 22-04-2016 IPR005101 Cryptochrome/DNA photolyase, FAD-binding domain SRM_RS13080 19171ec3d824d804e68d18283095e350 537 SUPERFAMILY SSF52425 49 226 9.16E-38 T 22-04-2016 IPR006050 DNA photolyase, N-terminal SRM_RS13080 19171ec3d824d804e68d18283095e350 537 Pfam PF00875 DNA photolyase 51 175 4.4E-22 T 22-04-2016 IPR006050 DNA photolyase, N-terminal SRM_RS13080 19171ec3d824d804e68d18283095e350 537 ProSitePatterns PS00394 DNA photolyases class 1 signature 1. 365 377 - T 22-04-2016 IPR018394 Cryptochrome/DNA photolyase class 1, conserved site, C-terminal SRM_RS13080 19171ec3d824d804e68d18283095e350 537 PANTHER PTHR11455:SF21 50 532 7.1E-175 T 22-04-2016 SRM_RS03350 4460f81199fe36437956bf5c2f4095f2 388 Gene3D G3DSA:1.10.230.10 251 334 4.0E-31 T 22-04-2016 IPR016143 Citrate synthase-like, small alpha subdomain SRM_RS03350 4460f81199fe36437956bf5c2f4095f2 388 SUPERFAMILY SSF48256 19 381 6.28E-132 T 22-04-2016 IPR002020 Citrate synthase GO:0046912 SRM_RS03350 4460f81199fe36437956bf5c2f4095f2 388 PRINTS PR00143 Citrate synthase signature 139 152 1.2E-41 T 22-04-2016 IPR002020 Citrate synthase GO:0046912 SRM_RS03350 4460f81199fe36437956bf5c2f4095f2 388 PRINTS PR00143 Citrate synthase signature 341 355 1.2E-41 T 22-04-2016 IPR002020 Citrate synthase GO:0046912 SRM_RS03350 4460f81199fe36437956bf5c2f4095f2 388 PRINTS PR00143 Citrate synthase signature 210 238 1.2E-41 T 22-04-2016 IPR002020 Citrate synthase GO:0046912 SRM_RS03350 4460f81199fe36437956bf5c2f4095f2 388 PRINTS PR00143 Citrate synthase signature 264 284 1.2E-41 T 22-04-2016 IPR002020 Citrate synthase GO:0046912 SRM_RS03350 4460f81199fe36437956bf5c2f4095f2 388 PRINTS PR00143 Citrate synthase signature 321 337 1.2E-41 T 22-04-2016 IPR002020 Citrate synthase GO:0046912 SRM_RS03350 4460f81199fe36437956bf5c2f4095f2 388 PRINTS PR00143 Citrate synthase signature 188 203 1.2E-41 T 22-04-2016 IPR002020 Citrate synthase GO:0046912 SRM_RS03350 4460f81199fe36437956bf5c2f4095f2 388 PANTHER PTHR11739 21 388 1.4E-153 T 22-04-2016 IPR002020 Citrate synthase GO:0046912 SRM_RS03350 4460f81199fe36437956bf5c2f4095f2 388 TIGRFAM TIGR01800 cit_synth_II: 2-methylcitrate synthase/citrate synthase II 20 388 6.4E-154 T 22-04-2016 IPR011278 2-methylcitrate synthase/citrate synthase type I GO:0005737|GO:0046912 SRM_RS03350 4460f81199fe36437956bf5c2f4095f2 388 Pfam PF00285 Citrate synthase, C-terminal domain 21 371 7.6E-130 T 22-04-2016 IPR002020 Citrate synthase GO:0046912 SRM_RS03350 4460f81199fe36437956bf5c2f4095f2 388 Gene3D G3DSA:1.10.580.10 27 250 1.8E-88 T 22-04-2016 IPR016142 Citrate synthase-like, large alpha subdomain UniPathway: UPA00223 SRM_RS03350 4460f81199fe36437956bf5c2f4095f2 388 PIRSF PIRSF001369 14 388 9.4E-141 T 22-04-2016 IPR024176 Citrate synthase, bacterial-type UniPathway: UPA00223 SRM_RS09550 0047dd18b805bc64c812290a8a9284de 349 PANTHER PTHR30307 2 348 9.4E-132 T 22-04-2016 SRM_RS09550 0047dd18b805bc64c812290a8a9284de 349 Pfam PF02547 Queuosine biosynthesis protein 4 348 2.4E-119 T 22-04-2016 IPR003699 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA GO:0008616|GO:0016740|GO:0016853 MetaCyc: PWY-6700|UniPathway: UPA00392 SRM_RS09550 0047dd18b805bc64c812290a8a9284de 349 TIGRFAM TIGR00113 queA: S-adenosylmethionine:tRNA ribosyltransferase-isomerase 1 348 9.4E-107 T 22-04-2016 IPR003699 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA GO:0008616|GO:0016740|GO:0016853 MetaCyc: PWY-6700|UniPathway: UPA00392 SRM_RS09550 0047dd18b805bc64c812290a8a9284de 349 SUPERFAMILY SSF111337 1 348 1.96E-114 T 22-04-2016 IPR003699 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA GO:0008616|GO:0016740|GO:0016853 MetaCyc: PWY-6700|UniPathway: UPA00392 SRM_RS09550 0047dd18b805bc64c812290a8a9284de 349 Gene3D G3DSA:3.40.1780.10 1 63 4.1E-81 T 22-04-2016 SRM_RS09550 0047dd18b805bc64c812290a8a9284de 349 Gene3D G3DSA:3.40.1780.10 185 348 4.1E-81 T 22-04-2016 SRM_RS09550 0047dd18b805bc64c812290a8a9284de 349 PANTHER PTHR30307:SF0 2 348 9.4E-132 T 22-04-2016 SRM_RS09550 0047dd18b805bc64c812290a8a9284de 349 Hamap MF_00113 S-adenosylmethionine:tRNA ribosyltransferase-isomerase [queA]. 1 349 40.321 T 22-04-2016 IPR003699 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA GO:0008616|GO:0016740|GO:0016853 MetaCyc: PWY-6700|UniPathway: UPA00392 SRM_RS09550 0047dd18b805bc64c812290a8a9284de 349 Gene3D G3DSA:2.40.10.240 66 142 8.3E-20 T 22-04-2016 SRM_RS07855 a261e620f4dab319df755e2221a0a04a 856 PANTHER PTHR11731 300 853 2.7E-113 T 22-04-2016 SRM_RS07855 a261e620f4dab319df755e2221a0a04a 856 Pfam PF00326 Prolyl oligopeptidase family 655 850 4.7E-44 T 22-04-2016 IPR001375 Peptidase S9, prolyl oligopeptidase, catalytic domain GO:0006508|GO:0008236 SRM_RS07855 a261e620f4dab319df755e2221a0a04a 856 SUPERFAMILY SSF82171 396 587 6.28E-42 T 22-04-2016 SRM_RS07855 a261e620f4dab319df755e2221a0a04a 856 SUPERFAMILY SSF82171 81 332 6.28E-42 T 22-04-2016 SRM_RS07855 a261e620f4dab319df755e2221a0a04a 856 Pfam PF00930 Dipeptidyl peptidase IV (DPP IV) N-terminal region 392 566 1.9E-16 T 22-04-2016 IPR002469 Dipeptidylpeptidase IV, N-terminal domain GO:0006508 SRM_RS07855 a261e620f4dab319df755e2221a0a04a 856 Gene3D G3DSA:3.40.50.1820 599 848 2.5E-62 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold SRM_RS07855 a261e620f4dab319df755e2221a0a04a 856 SUPERFAMILY SSF53474 599 846 1.08E-58 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold SRM_RS07855 a261e620f4dab319df755e2221a0a04a 856 ProSitePatterns PS00708 Prolyl endopeptidase family serine active site. 693 723 - T 22-04-2016 IPR002471 Peptidase S9, serine active site GO:0004252|GO:0006508 SRM_RS07855 a261e620f4dab319df755e2221a0a04a 856 PANTHER PTHR11731:SF145 174 246 2.7E-113 T 22-04-2016 SRM_RS07855 a261e620f4dab319df755e2221a0a04a 856 PANTHER PTHR11731:SF145 300 853 2.7E-113 T 22-04-2016 SRM_RS07855 a261e620f4dab319df755e2221a0a04a 856 PANTHER PTHR11731 174 246 2.7E-113 T 22-04-2016 SRM_RS07855 a261e620f4dab319df755e2221a0a04a 856 Gene3D G3DSA:2.140.10.30 80 245 5.1E-47 T 22-04-2016 IPR002469 Dipeptidylpeptidase IV, N-terminal domain GO:0006508 SRM_RS07855 a261e620f4dab319df755e2221a0a04a 856 Gene3D G3DSA:2.140.10.30 286 576 5.1E-47 T 22-04-2016 IPR002469 Dipeptidylpeptidase IV, N-terminal domain GO:0006508 SRM_RS09110 92b07dd46fbe90aec55c38432974b105 314 Hamap MF_00487 Malate dehydrogenase [mdh]. 1 305 41.565 T 22-04-2016 IPR011275 Malate dehydrogenase, type 3 GO:0016616|GO:0055114 KEGG: 00020+1.1.1.37|KEGG: 00270+1.1.1.37|KEGG: 00620+1.1.1.37|KEGG: 00630+1.1.1.37|KEGG: 00680+1.1.1.37|KEGG: 00710+1.1.1.37|KEGG: 00720+1.1.1.37|MetaCyc: PWY-1622|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7115|MetaCyc: PWY-7383 SRM_RS09110 92b07dd46fbe90aec55c38432974b105 314 PRINTS PR00086 L-lactate dehydrogenase signature 27 51 2.6E-33 T 22-04-2016 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 SRM_RS09110 92b07dd46fbe90aec55c38432974b105 314 PRINTS PR00086 L-lactate dehydrogenase signature 2 26 2.6E-33 T 22-04-2016 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 SRM_RS09110 92b07dd46fbe90aec55c38432974b105 314 PRINTS PR00086 L-lactate dehydrogenase signature 115 135 2.6E-33 T 22-04-2016 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 SRM_RS09110 92b07dd46fbe90aec55c38432974b105 314 PRINTS PR00086 L-lactate dehydrogenase signature 169 182 2.6E-33 T 22-04-2016 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 SRM_RS09110 92b07dd46fbe90aec55c38432974b105 314 PRINTS PR00086 L-lactate dehydrogenase signature 139 157 2.6E-33 T 22-04-2016 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 SRM_RS09110 92b07dd46fbe90aec55c38432974b105 314 SUPERFAMILY SSF51735 1 142 6.35E-47 T 22-04-2016 IPR016040 NAD(P)-binding domain SRM_RS09110 92b07dd46fbe90aec55c38432974b105 314 Gene3D G3DSA:3.40.50.720 1 142 1.7E-48 T 22-04-2016 IPR016040 NAD(P)-binding domain SRM_RS09110 92b07dd46fbe90aec55c38432974b105 314 PANTHER PTHR11540:SF16 1 313 8.6E-129 T 22-04-2016 SRM_RS09110 92b07dd46fbe90aec55c38432974b105 314 Pfam PF00056 lactate/malate dehydrogenase, NAD binding domain 1 141 1.3E-39 T 22-04-2016 IPR001236 Lactate/malate dehydrogenase, N-terminal GO:0016491|GO:0055114 SRM_RS09110 92b07dd46fbe90aec55c38432974b105 314 Pfam PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain 145 303 2.0E-27 T 22-04-2016 IPR022383 Lactate/malate dehydrogenase, C-terminal GO:0016616|GO:0055114 SRM_RS09110 92b07dd46fbe90aec55c38432974b105 314 PANTHER PTHR11540 1 313 8.6E-129 T 22-04-2016 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 SRM_RS09110 92b07dd46fbe90aec55c38432974b105 314 Gene3D G3DSA:3.90.110.10 145 303 3.2E-57 T 22-04-2016 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal GO:0003824|GO:0005975|GO:0016616|GO:0055114 SRM_RS09110 92b07dd46fbe90aec55c38432974b105 314 SUPERFAMILY SSF56327 142 304 3.17E-53 T 22-04-2016 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal GO:0003824|GO:0005975|GO:0016616|GO:0055114 SRM_RS09110 92b07dd46fbe90aec55c38432974b105 314 TIGRFAM TIGR01763 MalateDH_bact: malate dehydrogenase, NAD-dependent 1 302 3.9E-134 T 22-04-2016 IPR011275 Malate dehydrogenase, type 3 GO:0016616|GO:0055114 KEGG: 00020+1.1.1.37|KEGG: 00270+1.1.1.37|KEGG: 00620+1.1.1.37|KEGG: 00630+1.1.1.37|KEGG: 00680+1.1.1.37|KEGG: 00710+1.1.1.37|KEGG: 00720+1.1.1.37|MetaCyc: PWY-1622|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7115|MetaCyc: PWY-7383 SRM_RS09110 92b07dd46fbe90aec55c38432974b105 314 PIRSF PIRSF000102 1 310 3.2E-100 T 22-04-2016 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 SRM_RS14665 4a4635c27afbd0716491552082360bb0 262 TIGRFAM TIGR02488 flgG_G_neg: flagellar basal-body rod protein FlgG 5 260 2.4E-98 T 22-04-2016 IPR012834 Flagellar basal-body rod FlgG GO:0009426|GO:0071973 SRM_RS14665 4a4635c27afbd0716491552082360bb0 262 Pfam PF00460 Flagella basal body rod protein 6 36 5.6E-8 T 22-04-2016 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 SRM_RS14665 4a4635c27afbd0716491552082360bb0 262 Pfam PF06429 Flagellar basal body rod FlgEFG protein C-terminal 182 259 2.3E-24 T 22-04-2016 IPR010930 Flagellar basal-body/hook protein, C-terminal domain SRM_RS14665 4a4635c27afbd0716491552082360bb0 262 PANTHER PTHR30435:SF19 1 262 8.5E-109 T 22-04-2016 SRM_RS14665 4a4635c27afbd0716491552082360bb0 262 TIGRFAM TIGR03506 FlgEFG_subfam: flagellar hook-basal body protein 5 136 1.6E-47 T 22-04-2016 IPR020013 Fagellar hook-basal body protein, FlgE/F/G SRM_RS14665 4a4635c27afbd0716491552082360bb0 262 TIGRFAM TIGR03506 FlgEFG_subfam: flagellar hook-basal body protein 146 243 3.4E-31 T 22-04-2016 IPR020013 Fagellar hook-basal body protein, FlgE/F/G SRM_RS14665 4a4635c27afbd0716491552082360bb0 262 PANTHER PTHR30435 1 262 8.5E-109 T 22-04-2016 SRM_RS14665 4a4635c27afbd0716491552082360bb0 262 SUPERFAMILY SSF117143 92 220 2.09E-38 T 22-04-2016 SRM_RS14015 81d44d8c51fe9365bdf2ac87a4cd2871 624 Gene3D G3DSA:3.30.565.10 439 596 1.3E-40 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SRM_RS14015 81d44d8c51fe9365bdf2ac87a4cd2871 624 SMART SM00387 482 594 7.8E-34 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SRM_RS14015 81d44d8c51fe9365bdf2ac87a4cd2871 624 Pfam PF00512 His Kinase A (phospho-acceptor) domain 368 438 1.2E-15 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SRM_RS14015 81d44d8c51fe9365bdf2ac87a4cd2871 624 Gene3D G3DSA:1.10.287.130 372 433 1.1E-15 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SRM_RS14015 81d44d8c51fe9365bdf2ac87a4cd2871 624 PRINTS PR00344 Bacterial sensor protein C-terminal signature 554 572 4.8E-15 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SRM_RS14015 81d44d8c51fe9365bdf2ac87a4cd2871 624 PRINTS PR00344 Bacterial sensor protein C-terminal signature 519 533 4.8E-15 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SRM_RS14015 81d44d8c51fe9365bdf2ac87a4cd2871 624 PRINTS PR00344 Bacterial sensor protein C-terminal signature 578 591 4.8E-15 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SRM_RS14015 81d44d8c51fe9365bdf2ac87a4cd2871 624 PRINTS PR00344 Bacterial sensor protein C-terminal signature 537 547 4.8E-15 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SRM_RS14015 81d44d8c51fe9365bdf2ac87a4cd2871 624 PANTHER PTHR24423 211 593 4.3E-91 T 22-04-2016 SRM_RS14015 81d44d8c51fe9365bdf2ac87a4cd2871 624 PANTHER PTHR24423 45 58 4.3E-91 T 22-04-2016 SRM_RS14015 81d44d8c51fe9365bdf2ac87a4cd2871 624 Pfam PF08448 PAS fold 233 349 6.9E-9 T 22-04-2016 IPR013656 PAS fold-4 SRM_RS14015 81d44d8c51fe9365bdf2ac87a4cd2871 624 SUPERFAMILY SSF55874 427 595 1.96E-40 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SRM_RS14015 81d44d8c51fe9365bdf2ac87a4cd2871 624 SMART SM00388 367 438 1.5E-17 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SRM_RS14015 81d44d8c51fe9365bdf2ac87a4cd2871 624 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 223 354 2.5E-8 T 22-04-2016 IPR000014 PAS domain SRM_RS14015 81d44d8c51fe9365bdf2ac87a4cd2871 624 SUPERFAMILY SSF47384 352 440 2.55E-17 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SRM_RS14015 81d44d8c51fe9365bdf2ac87a4cd2871 624 SUPERFAMILY SSF55785 219 345 2.79E-12 T 22-04-2016 IPR000014 PAS domain SRM_RS14015 81d44d8c51fe9365bdf2ac87a4cd2871 624 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 484 592 1.9E-23 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SRM_RS14015 81d44d8c51fe9365bdf2ac87a4cd2871 624 Gene3D G3DSA:3.30.450.20 227 371 9.2E-14 T 22-04-2016 SRM_RS05680 ed908b3adac6e573f4a9b2f65bfeb3e8 187 Gene3D G3DSA:3.30.240.20 96 161 1.2E-16 T 22-04-2016 IPR023090 Uncharacterised domain UPF0702, alpha/beta domain SRM_RS05680 ed908b3adac6e573f4a9b2f65bfeb3e8 187 Pfam PF04239 Protein of unknown function (DUF421) 98 161 1.9E-10 T 22-04-2016 IPR007353 Protein of unknown function DUF421 SRM_RS05680 ed908b3adac6e573f4a9b2f65bfeb3e8 187 PANTHER PTHR34582:SF1 1 184 8.6E-41 T 22-04-2016 SRM_RS05680 ed908b3adac6e573f4a9b2f65bfeb3e8 187 PANTHER PTHR34582 1 184 8.6E-41 T 22-04-2016 SRM_RS15185 c4c3b33943ba50507bb6247fcaa5b613 237 Pfam PF13419 Haloacid dehalogenase-like hydrolase 26 196 7.8E-25 T 22-04-2016 IPR023214 HAD-like domain SRM_RS15185 c4c3b33943ba50507bb6247fcaa5b613 237 PANTHER PTHR18901 24 219 7.1E-46 T 22-04-2016 SRM_RS15185 c4c3b33943ba50507bb6247fcaa5b613 237 SUPERFAMILY SSF56784 24 218 1.11E-43 T 22-04-2016 IPR023214 HAD-like domain SRM_RS15185 c4c3b33943ba50507bb6247fcaa5b613 237 Gene3D G3DSA:3.40.50.1000 79 224 1.1E-43 T 22-04-2016 IPR023214 HAD-like domain SRM_RS15185 c4c3b33943ba50507bb6247fcaa5b613 237 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 25 196 4.7E-18 T 22-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 SRM_RS15185 c4c3b33943ba50507bb6247fcaa5b613 237 TIGRFAM TIGR01549 HAD-SF-IA-v1: HAD hydrolase, family IA, variant 1 25 190 3.6E-7 T 22-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 SRM_RS03685 0963398895b330a576303f1f8becefd2 565 Pfam PF00117 Glutamine amidotransferase class-I 312 535 6.5E-53 T 22-04-2016 IPR017926 Glutamine amidotransferase Reactome: REACT_1698 SRM_RS03685 0963398895b330a576303f1f8becefd2 565 TIGRFAM TIGR00337 PyrG: CTP synthase 2 536 1.2E-229 T 22-04-2016 IPR004468 CTP synthase GO:0003883|GO:0006221 KEGG: 00240+6.3.4.2|MetaCyc: PWY-7176|MetaCyc: PWY-7177|MetaCyc: PWY-7185|Reactome: REACT_1698|UniPathway: UPA00159 SRM_RS03685 0963398895b330a576303f1f8becefd2 565 Gene3D G3DSA:3.40.50.880 298 542 3.0E-93 T 22-04-2016 IPR029062 Class I glutamine amidotransferase-like SRM_RS03685 0963398895b330a576303f1f8becefd2 565 Hamap MF_01227 CTP synthase [pyrG]. 3 541 48.957 T 22-04-2016 IPR004468 CTP synthase GO:0003883|GO:0006221 KEGG: 00240+6.3.4.2|MetaCyc: PWY-7176|MetaCyc: PWY-7177|MetaCyc: PWY-7185|Reactome: REACT_1698|UniPathway: UPA00159 SRM_RS03685 0963398895b330a576303f1f8becefd2 565 SUPERFAMILY SSF52317 300 541 8.08E-78 T 22-04-2016 IPR029062 Class I glutamine amidotransferase-like SRM_RS03685 0963398895b330a576303f1f8becefd2 565 Pfam PF06418 CTP synthase N-terminus 4 266 1.2E-121 T 22-04-2016 IPR017456 CTP synthase, N-terminal GO:0003883|GO:0006221 KEGG: 00240+6.3.4.2|MetaCyc: PWY-7176|MetaCyc: PWY-7177|MetaCyc: PWY-7185|Reactome: REACT_1698|UniPathway: UPA00159 SRM_RS03685 0963398895b330a576303f1f8becefd2 565 Gene3D G3DSA:3.40.50.300 2 270 3.7E-130 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SRM_RS03685 0963398895b330a576303f1f8becefd2 565 SUPERFAMILY SSF52540 3 266 1.67E-118 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SRM_RS03685 0963398895b330a576303f1f8becefd2 565 PANTHER PTHR11550 1 540 0.0 T 22-04-2016 IPR004468 CTP synthase GO:0003883|GO:0006221 KEGG: 00240+6.3.4.2|MetaCyc: PWY-7176|MetaCyc: PWY-7177|MetaCyc: PWY-7185|Reactome: REACT_1698|UniPathway: UPA00159 SRM_RS11920 3901d011ee1f40fdbade30670693a36b 315 Pfam PF00116 Cytochrome C oxidase subunit II, periplasmic domain 121 193 8.8E-17 T 22-04-2016 IPR002429 Cytochrome c oxidase subunit II C-terminal GO:0004129|GO:0005507|GO:0016020 SRM_RS11920 3901d011ee1f40fdbade30670693a36b 315 SUPERFAMILY SSF46626 216 308 1.46E-13 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 SRM_RS11920 3901d011ee1f40fdbade30670693a36b 315 Gene3D G3DSA:1.10.760.10 215 306 6.8E-20 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 SRM_RS11920 3901d011ee1f40fdbade30670693a36b 315 PANTHER PTHR22888 3 236 3.2E-87 T 22-04-2016 SRM_RS11920 3901d011ee1f40fdbade30670693a36b 315 SUPERFAMILY SSF81464 3 90 4.58E-14 T 22-04-2016 IPR011759 Cytochrome C oxidase subunit II, transmembrane domain GO:0016021|GO:0022900 SRM_RS11920 3901d011ee1f40fdbade30670693a36b 315 Pfam PF02790 Cytochrome C oxidase subunit II, transmembrane domain 4 79 1.0E-7 T 22-04-2016 IPR011759 Cytochrome C oxidase subunit II, transmembrane domain GO:0016021|GO:0022900 SRM_RS11920 3901d011ee1f40fdbade30670693a36b 315 TIGRFAM TIGR02866 CoxB: cytochrome c oxidase, subunit II 11 204 3.7E-57 T 22-04-2016 IPR014222 Cytochrome c oxidase, subunit II GO:0016021|GO:0016491 SRM_RS11920 3901d011ee1f40fdbade30670693a36b 315 Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III 216 304 5.0E-6 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 SRM_RS11920 3901d011ee1f40fdbade30670693a36b 315 SUPERFAMILY SSF49503 92 248 1.27E-46 T 22-04-2016 IPR008972 Cupredoxin SRM_RS11920 3901d011ee1f40fdbade30670693a36b 315 Gene3D G3DSA:1.10.287.90 3 90 1.6E-12 T 22-04-2016 IPR011759 Cytochrome C oxidase subunit II, transmembrane domain GO:0016021|GO:0022900 SRM_RS11920 3901d011ee1f40fdbade30670693a36b 315 ProSitePatterns PS00078 CO II and nitrous oxide reductase dinuclear copper centers signature. 139 187 - T 22-04-2016 IPR001505 Copper centre Cu(A) GO:0005507 SRM_RS11920 3901d011ee1f40fdbade30670693a36b 315 Gene3D G3DSA:2.60.40.420 96 205 1.2E-35 T 22-04-2016 IPR008972 Cupredoxin SRM_RS11920 3901d011ee1f40fdbade30670693a36b 315 PANTHER PTHR22888:SF2 3 236 3.2E-87 T 22-04-2016 SRM_RS03730 8c6fcef15b60b1a47fc1c739943e616f 389 PANTHER PTHR30474:SF2 1 389 1.1E-104 T 22-04-2016 SRM_RS03730 8c6fcef15b60b1a47fc1c739943e616f 389 PANTHER PTHR30474 1 389 1.1E-104 T 22-04-2016 IPR001182 Cell cycle protein FtsW/RodA GO:0016021|GO:0051301 SRM_RS03730 8c6fcef15b60b1a47fc1c739943e616f 389 Pfam PF01098 Cell cycle protein 22 381 1.1E-82 T 22-04-2016 IPR001182 Cell cycle protein FtsW/RodA GO:0016021|GO:0051301 SRM_RS01295 2d66bd98f177ee1ef897ea0a7b9e3421 817 SUPERFAMILY SSF56784 565 809 7.66E-50 T 22-04-2016 IPR023214 HAD-like domain SRM_RS01295 2d66bd98f177ee1ef897ea0a7b9e3421 817 SUPERFAMILY SSF56784 505 524 7.66E-50 T 22-04-2016 IPR023214 HAD-like domain SRM_RS01295 2d66bd98f177ee1ef897ea0a7b9e3421 817 PRINTS PR00941 Cadmium-transporting ATPase signature 222 234 6.2E-10 T 22-04-2016 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 SRM_RS01295 2d66bd98f177ee1ef897ea0a7b9e3421 817 PRINTS PR00941 Cadmium-transporting ATPase signature 276 296 6.2E-10 T 22-04-2016 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 SRM_RS01295 2d66bd98f177ee1ef897ea0a7b9e3421 817 PRINTS PR00941 Cadmium-transporting ATPase signature 98 119 6.2E-10 T 22-04-2016 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 SRM_RS01295 2d66bd98f177ee1ef897ea0a7b9e3421 817 PRINTS PR00941 Cadmium-transporting ATPase signature 296 312 6.2E-10 T 22-04-2016 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 SRM_RS01295 2d66bd98f177ee1ef897ea0a7b9e3421 817 Gene3D G3DSA:3.40.1110.10 521 636 4.6E-22 T 22-04-2016 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 SRM_RS01295 2d66bd98f177ee1ef897ea0a7b9e3421 817 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 733 745 3.1E-24 T 22-04-2016 SRM_RS01295 2d66bd98f177ee1ef897ea0a7b9e3421 817 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 506 520 3.1E-24 T 22-04-2016 SRM_RS01295 2d66bd98f177ee1ef897ea0a7b9e3421 817 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 657 667 3.1E-24 T 22-04-2016 SRM_RS01295 2d66bd98f177ee1ef897ea0a7b9e3421 817 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 634 645 3.1E-24 T 22-04-2016 SRM_RS01295 2d66bd98f177ee1ef897ea0a7b9e3421 817 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 341 355 3.1E-24 T 22-04-2016 SRM_RS01295 2d66bd98f177ee1ef897ea0a7b9e3421 817 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 709 728 3.1E-24 T 22-04-2016 SRM_RS01295 2d66bd98f177ee1ef897ea0a7b9e3421 817 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 264 539 5.1E-37 T 22-04-2016 IPR001757 P-type ATPase GO:0016021 SRM_RS01295 2d66bd98f177ee1ef897ea0a7b9e3421 817 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 609 787 8.7E-36 T 22-04-2016 IPR001757 P-type ATPase GO:0016021 SRM_RS01295 2d66bd98f177ee1ef897ea0a7b9e3421 817 PANTHER PTHR24093:SF317 89 804 6.9E-201 T 22-04-2016 SRM_RS01295 2d66bd98f177ee1ef897ea0a7b9e3421 817 Pfam PF00702 haloacid dehalogenase-like hydrolase 504 722 8.4E-41 T 22-04-2016 SRM_RS01295 2d66bd98f177ee1ef897ea0a7b9e3421 817 Gene3D G3DSA:3.40.50.1000 637 776 1.8E-41 T 22-04-2016 IPR023214 HAD-like domain SRM_RS01295 2d66bd98f177ee1ef897ea0a7b9e3421 817 Gene3D G3DSA:3.40.50.1000 482 520 1.8E-41 T 22-04-2016 IPR023214 HAD-like domain SRM_RS01295 2d66bd98f177ee1ef897ea0a7b9e3421 817 ProSitePatterns PS01229 Hypothetical cof family signature 2. 709 731 - T 22-04-2016 SRM_RS01295 2d66bd98f177ee1ef897ea0a7b9e3421 817 SUPERFAMILY SSF55008 83 145 4.09E-5 T 22-04-2016 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 SRM_RS01295 2d66bd98f177ee1ef897ea0a7b9e3421 817 Gene3D G3DSA:3.30.70.100 22 75 1.9E-4 T 22-04-2016 SRM_RS01295 2d66bd98f177ee1ef897ea0a7b9e3421 817 ProSitePatterns PS00154 E1-E2 ATPases phosphorylation site. 508 514 - T 22-04-2016 IPR018303 P-type ATPase, phosphorylation site SRM_RS01295 2d66bd98f177ee1ef897ea0a7b9e3421 817 Gene3D G3DSA:2.70.150.10 243 406 7.9E-32 T 22-04-2016 IPR008250 P-type ATPase, A domain GO:0000166|GO:0046872 SRM_RS01295 2d66bd98f177ee1ef897ea0a7b9e3421 817 PANTHER PTHR24093 89 804 6.9E-201 T 22-04-2016 SRM_RS01295 2d66bd98f177ee1ef897ea0a7b9e3421 817 SUPERFAMILY SSF81653 294 406 1.96E-27 T 22-04-2016 SRM_RS01295 2d66bd98f177ee1ef897ea0a7b9e3421 817 SUPERFAMILY SSF81665 243 295 9.42E-17 T 22-04-2016 SRM_RS01295 2d66bd98f177ee1ef897ea0a7b9e3421 817 SUPERFAMILY SSF81665 407 500 9.42E-17 T 22-04-2016 SRM_RS01295 2d66bd98f177ee1ef897ea0a7b9e3421 817 Pfam PF00122 E1-E2 ATPase 262 494 2.2E-64 T 22-04-2016 IPR008250 P-type ATPase, A domain GO:0000166|GO:0046872 SRM_RS01295 2d66bd98f177ee1ef897ea0a7b9e3421 817 TIGRFAM TIGR01525 ATPase-IB_hvy: heavy metal translocating P-type ATPase 241 811 6.7E-176 T 22-04-2016 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 SRM_RS01295 2d66bd98f177ee1ef897ea0a7b9e3421 817 Gene3D G3DSA:3.30.70.100 86 143 1.6E-4 T 22-04-2016 SRM_RS09755 ca971d64c2cf73ac3c881c89a6cf46d5 175 PANTHER PTHR34584:SF1 1 153 1.7E-41 T 22-04-2016 SRM_RS09755 ca971d64c2cf73ac3c881c89a6cf46d5 175 Pfam PF01899 Na+/H+ ion antiporter subunit 8 154 2.2E-40 T 22-04-2016 IPR002758 Na+/H+ antiporter subunit E GO:0006812|GO:0008324|GO:0016021 SRM_RS09755 ca971d64c2cf73ac3c881c89a6cf46d5 175 PANTHER PTHR34584 1 153 1.7E-41 T 22-04-2016 SRM_RS09755 ca971d64c2cf73ac3c881c89a6cf46d5 175 PIRSF PIRSF019239 1 162 2.1E-53 T 22-04-2016 IPR002758 Na+/H+ antiporter subunit E GO:0006812|GO:0008324|GO:0016021 SRM_RS14520 13f5e0be076df156b0beadcc67aa6b9e 319 PANTHER PTHR34982:SF1 107 314 1.3E-18 T 22-04-2016 SRM_RS14520 13f5e0be076df156b0beadcc67aa6b9e 319 Pfam PF02108 Flagellar assembly protein FliH 169 284 5.3E-8 T 22-04-2016 IPR018035 Flagellar assembly protein FliH/Type III secretion system HrpE SRM_RS14520 13f5e0be076df156b0beadcc67aa6b9e 319 PRINTS PR01003 Flagellar assembly protein FliH signature 229 256 8.0E-5 T 22-04-2016 IPR000563 Flagellar assembly protein FliH GO:0003774|GO:0009288|GO:0071973 SRM_RS14520 13f5e0be076df156b0beadcc67aa6b9e 319 PRINTS PR01003 Flagellar assembly protein FliH signature 188 205 8.0E-5 T 22-04-2016 IPR000563 Flagellar assembly protein FliH GO:0003774|GO:0009288|GO:0071973 SRM_RS14520 13f5e0be076df156b0beadcc67aa6b9e 319 PRINTS PR01003 Flagellar assembly protein FliH signature 126 148 8.0E-5 T 22-04-2016 IPR000563 Flagellar assembly protein FliH GO:0003774|GO:0009288|GO:0071973 SRM_RS14520 13f5e0be076df156b0beadcc67aa6b9e 319 PANTHER PTHR34982 107 314 1.3E-18 T 22-04-2016 SRM_RS10285 81e19215ab2f3897fd386b5e60bafc0d 876 Gene3D G3DSA:2.40.50.140 191 259 8.5E-8 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold SRM_RS10285 81e19215ab2f3897fd386b5e60bafc0d 876 Gene3D G3DSA:2.40.50.140 615 690 2.4E-16 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold SRM_RS10285 81e19215ab2f3897fd386b5e60bafc0d 876 Gene3D G3DSA:2.40.50.140 265 344 6.6E-14 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold SRM_RS10285 81e19215ab2f3897fd386b5e60bafc0d 876 SUPERFAMILY SSF50249 361 446 2.46E-24 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold SRM_RS10285 81e19215ab2f3897fd386b5e60bafc0d 876 SMART SM00316 447 519 9.5E-27 T 22-04-2016 IPR022967 RNA-binding domain, S1 SRM_RS10285 81e19215ab2f3897fd386b5e60bafc0d 876 SMART SM00316 362 432 1.0E-26 T 22-04-2016 IPR022967 RNA-binding domain, S1 SRM_RS10285 81e19215ab2f3897fd386b5e60bafc0d 876 SMART SM00316 621 691 4.1E-11 T 22-04-2016 IPR022967 RNA-binding domain, S1 SRM_RS10285 81e19215ab2f3897fd386b5e60bafc0d 876 SMART SM00316 194 258 4.5E-9 T 22-04-2016 IPR022967 RNA-binding domain, S1 SRM_RS10285 81e19215ab2f3897fd386b5e60bafc0d 876 SMART SM00316 534 606 1.7E-24 T 22-04-2016 IPR022967 RNA-binding domain, S1 SRM_RS10285 81e19215ab2f3897fd386b5e60bafc0d 876 SMART SM00316 274 343 5.2E-8 T 22-04-2016 IPR022967 RNA-binding domain, S1 SRM_RS10285 81e19215ab2f3897fd386b5e60bafc0d 876 Gene3D G3DSA:2.40.50.140 535 614 4.7E-28 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold SRM_RS10285 81e19215ab2f3897fd386b5e60bafc0d 876 PRINTS PR00681 Ribosomal protein S1 signature 384 405 3.9E-63 T 22-04-2016 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 SRM_RS10285 81e19215ab2f3897fd386b5e60bafc0d 876 PRINTS PR00681 Ribosomal protein S1 signature 327 347 3.9E-63 T 22-04-2016 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 SRM_RS10285 81e19215ab2f3897fd386b5e60bafc0d 876 PRINTS PR00681 Ribosomal protein S1 signature 462 481 3.9E-63 T 22-04-2016 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 SRM_RS10285 81e19215ab2f3897fd386b5e60bafc0d 876 PRINTS PR00681 Ribosomal protein S1 signature 502 520 3.9E-63 T 22-04-2016 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 SRM_RS10285 81e19215ab2f3897fd386b5e60bafc0d 876 PRINTS PR00681 Ribosomal protein S1 signature 298 315 3.9E-63 T 22-04-2016 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 SRM_RS10285 81e19215ab2f3897fd386b5e60bafc0d 876 PRINTS PR00681 Ribosomal protein S1 signature 214 228 3.9E-63 T 22-04-2016 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 SRM_RS10285 81e19215ab2f3897fd386b5e60bafc0d 876 PRINTS PR00681 Ribosomal protein S1 signature 255 274 3.9E-63 T 22-04-2016 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 SRM_RS10285 81e19215ab2f3897fd386b5e60bafc0d 876 PRINTS PR00681 Ribosomal protein S1 signature 196 214 3.9E-63 T 22-04-2016 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 SRM_RS10285 81e19215ab2f3897fd386b5e60bafc0d 876 PANTHER PTHR10724 174 685 4.9E-210 T 22-04-2016 SRM_RS10285 81e19215ab2f3897fd386b5e60bafc0d 876 SUPERFAMILY SSF50249 274 357 6.01E-15 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold SRM_RS10285 81e19215ab2f3897fd386b5e60bafc0d 876 SUPERFAMILY SSF50249 514 628 1.07E-28 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold SRM_RS10285 81e19215ab2f3897fd386b5e60bafc0d 876 Gene3D G3DSA:2.40.50.140 451 534 4.8E-31 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold SRM_RS10285 81e19215ab2f3897fd386b5e60bafc0d 876 Gene3D G3DSA:2.40.50.140 364 450 7.6E-28 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold SRM_RS10285 81e19215ab2f3897fd386b5e60bafc0d 876 PANTHER PTHR10724:SF6 174 685 4.9E-210 T 22-04-2016 SRM_RS10285 81e19215ab2f3897fd386b5e60bafc0d 876 SUPERFAMILY SSF50249 192 283 7.15E-16 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold SRM_RS10285 81e19215ab2f3897fd386b5e60bafc0d 876 SUPERFAMILY SSF50249 606 690 2.29E-14 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold SRM_RS10285 81e19215ab2f3897fd386b5e60bafc0d 876 TIGRFAM TIGR00717 rpsA: ribosomal protein bS1 190 689 1.3E-179 T 22-04-2016 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 SRM_RS10285 81e19215ab2f3897fd386b5e60bafc0d 876 SUPERFAMILY SSF50249 427 526 3.15E-27 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold SRM_RS10285 81e19215ab2f3897fd386b5e60bafc0d 876 Pfam PF00575 S1 RNA binding domain 621 689 9.1E-12 T 22-04-2016 IPR003029 S1 domain GO:0003676 SRM_RS10285 81e19215ab2f3897fd386b5e60bafc0d 876 Pfam PF00575 S1 RNA binding domain 194 257 3.7E-6 T 22-04-2016 IPR003029 S1 domain GO:0003676 SRM_RS10285 81e19215ab2f3897fd386b5e60bafc0d 876 Pfam PF00575 S1 RNA binding domain 447 519 3.5E-22 T 22-04-2016 IPR003029 S1 domain GO:0003676 SRM_RS10285 81e19215ab2f3897fd386b5e60bafc0d 876 Pfam PF00575 S1 RNA binding domain 534 606 5.6E-19 T 22-04-2016 IPR003029 S1 domain GO:0003676 SRM_RS10285 81e19215ab2f3897fd386b5e60bafc0d 876 Pfam PF00575 S1 RNA binding domain 274 343 2.8E-8 T 22-04-2016 IPR003029 S1 domain GO:0003676 SRM_RS10285 81e19215ab2f3897fd386b5e60bafc0d 876 Pfam PF00575 S1 RNA binding domain 361 432 1.6E-18 T 22-04-2016 IPR003029 S1 domain GO:0003676 SRM_RS07245 84622a81c302c545222fdea7f58dacf8 251 PANTHER PTHR24220:SF111 11 237 2.5E-97 T 22-04-2016 SRM_RS07245 84622a81c302c545222fdea7f58dacf8 251 SMART SM00382 39 227 3.5E-13 T 22-04-2016 IPR003593 AAA+ ATPase domain SRM_RS07245 84622a81c302c545222fdea7f58dacf8 251 Pfam PF00005 ABC transporter 30 178 2.4E-33 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 SRM_RS07245 84622a81c302c545222fdea7f58dacf8 251 Gene3D G3DSA:3.40.50.300 8 228 1.6E-64 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SRM_RS07245 84622a81c302c545222fdea7f58dacf8 251 PANTHER PTHR24220 11 237 2.5E-97 T 22-04-2016 SRM_RS07245 84622a81c302c545222fdea7f58dacf8 251 SUPERFAMILY SSF52540 9 237 2.47E-66 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SRM_RS07245 84622a81c302c545222fdea7f58dacf8 251 ProSitePatterns PS00211 ABC transporters family signature. 151 165 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 SRM_RS12995 e6d53cb886ab375c6d3394bdae7fd3cb 981 SUPERFAMILY SSF56935 157 365 5.13E-83 T 22-04-2016 SRM_RS12995 e6d53cb886ab375c6d3394bdae7fd3cb 981 SUPERFAMILY SSF56935 421 968 5.13E-83 T 22-04-2016 SRM_RS12995 e6d53cb886ab375c6d3394bdae7fd3cb 981 Pfam PF07715 TonB-dependent Receptor Plug Domain 174 293 3.5E-15 T 22-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 SRM_RS12995 e6d53cb886ab375c6d3394bdae7fd3cb 981 Gene3D G3DSA:2.40.170.20 296 357 1.4E-81 T 22-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 SRM_RS12995 e6d53cb886ab375c6d3394bdae7fd3cb 981 Gene3D G3DSA:2.40.170.20 403 980 1.4E-81 T 22-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 SRM_RS12995 e6d53cb886ab375c6d3394bdae7fd3cb 981 Pfam PF00593 TonB dependent receptor 674 979 9.0E-24 T 22-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 SRM_RS12995 e6d53cb886ab375c6d3394bdae7fd3cb 981 Pfam PF13715 CarboxypepD_reg-like domain 76 161 8.4E-20 T 22-04-2016 SRM_RS12995 e6d53cb886ab375c6d3394bdae7fd3cb 981 PANTHER PTHR30069:SF4 152 976 1.8E-90 T 22-04-2016 SRM_RS12995 e6d53cb886ab375c6d3394bdae7fd3cb 981 PANTHER PTHR30069 152 976 1.8E-90 T 22-04-2016 SRM_RS12995 e6d53cb886ab375c6d3394bdae7fd3cb 981 SUPERFAMILY SSF49464 75 165 2.16E-19 T 22-04-2016 IPR008969 Carboxypeptidase-like, regulatory domain SRM_RS12995 e6d53cb886ab375c6d3394bdae7fd3cb 981 Gene3D G3DSA:2.60.40.1120 75 152 5.8E-20 T 22-04-2016 IPR014766 Carboxypeptidase, regulatory domain SRM_RS12995 e6d53cb886ab375c6d3394bdae7fd3cb 981 Gene3D G3DSA:2.170.130.10 172 295 1.9E-22 T 22-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 SRM_RS03250 b9ce84c8720804fb3bf2f4403e76648e 506 Gene3D G3DSA:3.40.50.20 11 138 9.6E-54 T 22-04-2016 IPR016185 Pre-ATP-grasp domain SRM_RS03250 b9ce84c8720804fb3bf2f4403e76648e 506 Pfam PF02785 Biotin carboxylase C-terminal domain 345 452 4.5E-35 T 22-04-2016 IPR005482 Biotin carboxylase, C-terminal SRM_RS03250 b9ce84c8720804fb3bf2f4403e76648e 506 SMART SM00878 345 451 1.6E-52 T 22-04-2016 IPR005482 Biotin carboxylase, C-terminal SRM_RS03250 b9ce84c8720804fb3bf2f4403e76648e 506 SUPERFAMILY SSF51246 340 455 3.4E-39 T 22-04-2016 IPR011054 Rudiment single hybrid motif SRM_RS03250 b9ce84c8720804fb3bf2f4403e76648e 506 PANTHER PTHR18866 9 503 1.0E-293 T 22-04-2016 SRM_RS03250 b9ce84c8720804fb3bf2f4403e76648e 506 Gene3D G3DSA:3.30.470.20 212 455 5.7E-101 T 22-04-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 SRM_RS03250 b9ce84c8720804fb3bf2f4403e76648e 506 TIGRFAM TIGR00514 accC: acetyl-CoA carboxylase, biotin carboxylase subunit 11 453 5.0E-189 T 22-04-2016 IPR004549 Acetyl-CoA carboxylase, biotin carboxylase GO:0016874 SRM_RS03250 b9ce84c8720804fb3bf2f4403e76648e 506 Gene3D G3DSA:3.30.1490.20 139 211 4.2E-29 T 22-04-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 SRM_RS03250 b9ce84c8720804fb3bf2f4403e76648e 506 Pfam PF00289 Biotin carboxylase, N-terminal domain 11 119 2.3E-45 T 22-04-2016 IPR005481 Biotin carboxylase-like, N-terminal domain SRM_RS03250 b9ce84c8720804fb3bf2f4403e76648e 506 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 124 331 3.4E-83 T 22-04-2016 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 SRM_RS03250 b9ce84c8720804fb3bf2f4403e76648e 506 SUPERFAMILY SSF52440 8 122 6.4E-49 T 22-04-2016 IPR016185 Pre-ATP-grasp domain SRM_RS03250 b9ce84c8720804fb3bf2f4403e76648e 506 SUPERFAMILY SSF56059 92 357 1.45E-72 T 22-04-2016 SRM_RS03250 b9ce84c8720804fb3bf2f4403e76648e 506 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 295 302 - T 22-04-2016 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 SRM_RS03250 b9ce84c8720804fb3bf2f4403e76648e 506 ProSitePatterns PS00866 Carbamoyl-phosphate synthase subdomain signature 1. 162 176 - T 22-04-2016 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 SRM_RS06890 ae1d56b5412c8f50998d616d802fc836 425 Gene3D G3DSA:3.40.50.1480 7 190 1.2E-99 T 22-04-2016 SRM_RS06890 ae1d56b5412c8f50998d616d802fc836 425 Gene3D G3DSA:3.40.50.1480 351 418 1.2E-99 T 22-04-2016 SRM_RS06890 ae1d56b5412c8f50998d616d802fc836 425 Hamap MF_00563 Adenosylhomocysteinase [ahcY]. 3 425 47.603 T 22-04-2016 IPR000043 Adenosylhomocysteinase GO:0004013|GO:0006730 KEGG: 00270+3.3.1.1|MetaCyc: PWY-5041|UniPathway: UPA00314 SRM_RS06890 ae1d56b5412c8f50998d616d802fc836 425 Pfam PF05221 S-adenosyl-L-homocysteine hydrolase 8 139 1.4E-46 T 22-04-2016 IPR000043 Adenosylhomocysteinase GO:0004013|GO:0006730 KEGG: 00270+3.3.1.1|MetaCyc: PWY-5041|UniPathway: UPA00314 SRM_RS06890 ae1d56b5412c8f50998d616d802fc836 425 SUPERFAMILY SSF51735 189 351 2.46E-62 T 22-04-2016 IPR016040 NAD(P)-binding domain SRM_RS06890 ae1d56b5412c8f50998d616d802fc836 425 Gene3D G3DSA:3.40.50.720 191 349 7.1E-41 T 22-04-2016 IPR016040 NAD(P)-binding domain SRM_RS06890 ae1d56b5412c8f50998d616d802fc836 425 SMART SM00997 189 350 1.6E-95 T 22-04-2016 IPR015878 S-adenosyl-L-homocysteine hydrolase, NAD binding domain KEGG: 00270+3.3.1.1|MetaCyc: PWY-5041|UniPathway: UPA00314 SRM_RS06890 ae1d56b5412c8f50998d616d802fc836 425 SMART SM00996 7 422 9.0E-156 T 22-04-2016 IPR000043 Adenosylhomocysteinase GO:0004013|GO:0006730 KEGG: 00270+3.3.1.1|MetaCyc: PWY-5041|UniPathway: UPA00314 SRM_RS06890 ae1d56b5412c8f50998d616d802fc836 425 SUPERFAMILY SSF52283 7 188 3.34E-96 T 22-04-2016 SRM_RS06890 ae1d56b5412c8f50998d616d802fc836 425 SUPERFAMILY SSF52283 351 425 3.34E-96 T 22-04-2016 SRM_RS06890 ae1d56b5412c8f50998d616d802fc836 425 ProSitePatterns PS00739 S-adenosyl-L-homocysteine hydrolase signature 2. 211 227 - T 22-04-2016 IPR020082 S-adenosyl-L-homocysteine hydrolase, conserved site GO:0004013|GO:0006730 KEGG: 00270+3.3.1.1|MetaCyc: PWY-5041|UniPathway: UPA00314 SRM_RS06890 ae1d56b5412c8f50998d616d802fc836 425 PANTHER PTHR23420 8 417 4.3E-242 T 22-04-2016 IPR000043 Adenosylhomocysteinase GO:0004013|GO:0006730 KEGG: 00270+3.3.1.1|MetaCyc: PWY-5041|UniPathway: UPA00314 SRM_RS06890 ae1d56b5412c8f50998d616d802fc836 425 Pfam PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain 189 349 7.8E-53 T 22-04-2016 IPR015878 S-adenosyl-L-homocysteine hydrolase, NAD binding domain KEGG: 00270+3.3.1.1|MetaCyc: PWY-5041|UniPathway: UPA00314 SRM_RS06890 ae1d56b5412c8f50998d616d802fc836 425 PIRSF PIRSF001109 1 425 8.7E-182 T 22-04-2016 IPR000043 Adenosylhomocysteinase GO:0004013|GO:0006730 KEGG: 00270+3.3.1.1|MetaCyc: PWY-5041|UniPathway: UPA00314 SRM_RS06890 ae1d56b5412c8f50998d616d802fc836 425 TIGRFAM TIGR00936 ahcY: adenosylhomocysteinase 8 425 2.0E-187 T 22-04-2016 IPR000043 Adenosylhomocysteinase GO:0004013|GO:0006730 KEGG: 00270+3.3.1.1|MetaCyc: PWY-5041|UniPathway: UPA00314 SRM_RS13060 c4e9ce3a3a5131b4072f24c7537ca3ca 386 PANTHER PTHR34220 162 369 2.1E-63 T 22-04-2016 SRM_RS13060 c4e9ce3a3a5131b4072f24c7537ca3ca 386 SUPERFAMILY SSF55874 231 362 1.83E-19 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SRM_RS13060 c4e9ce3a3a5131b4072f24c7537ca3ca 386 SMART SM00387 266 365 3.1E-10 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SRM_RS13060 c4e9ce3a3a5131b4072f24c7537ca3ca 386 PANTHER PTHR34220:SF3 162 369 2.1E-63 T 22-04-2016 SRM_RS13060 c4e9ce3a3a5131b4072f24c7537ca3ca 386 Pfam PF06580 Histidine kinase 176 255 1.6E-24 T 22-04-2016 IPR010559 Signal transduction histidine kinase, internal region GO:0000155|GO:0000160|GO:0016021 SRM_RS13060 c4e9ce3a3a5131b4072f24c7537ca3ca 386 Gene3D G3DSA:3.30.565.10 225 364 3.6E-19 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SRM_RS13060 c4e9ce3a3a5131b4072f24c7537ca3ca 386 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 274 363 6.5E-7 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SRM_RS14060 323871cef1758c9261a290b13f681d2c 427 SUPERFAMILY SSF53649 34 400 1.08E-98 T 22-04-2016 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 SRM_RS14060 323871cef1758c9261a290b13f681d2c 427 Gene3D G3DSA:3.40.720.10 10 325 4.4E-90 T 22-04-2016 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 SRM_RS14060 323871cef1758c9261a290b13f681d2c 427 PANTHER PTHR10151 7 418 1.5E-169 T 22-04-2016 IPR024873 Ectonucleotide pyrophosphatase/phosphodiesterase family SRM_RS14060 323871cef1758c9261a290b13f681d2c 427 Pfam PF01663 Type I phosphodiesterase / nucleotide pyrophosphatase 42 361 1.0E-89 T 22-04-2016 IPR002591 Type I phosphodiesterase/nucleotide pyrophosphatase/phosphate transferase GO:0003824 SRM_RS05210 6b7a6a6f8b6a29d74ee0bb2c31cc0815 332 TIGRFAM TIGR00510 lipA: lipoyl synthase 50 330 9.8E-107 T 22-04-2016 IPR003698 Lipoyl synthase GO:0009107|GO:0016992|GO:0051539 KEGG: 00785+2.8.1.8|MetaCyc: PWY-6987|MetaCyc: PWY-7382|UniPathway: UPA00538 SRM_RS05210 6b7a6a6f8b6a29d74ee0bb2c31cc0815 332 PANTHER PTHR10949 51 330 1.8E-139 T 22-04-2016 IPR003698 Lipoyl synthase GO:0009107|GO:0016992|GO:0051539 KEGG: 00785+2.8.1.8|MetaCyc: PWY-6987|MetaCyc: PWY-7382|UniPathway: UPA00538 SRM_RS05210 6b7a6a6f8b6a29d74ee0bb2c31cc0815 332 SUPERFAMILY SSF102114 69 329 3.53E-63 T 22-04-2016 SRM_RS05210 6b7a6a6f8b6a29d74ee0bb2c31cc0815 332 Pfam PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family 51 94 1.4E-8 T 22-04-2016 IPR031691 Lipoyl synthase, N-terminal KEGG: 00785+2.8.1.8|MetaCyc: PWY-6987|MetaCyc: PWY-7382|UniPathway: UPA00538 SRM_RS05210 6b7a6a6f8b6a29d74ee0bb2c31cc0815 332 PIRSF PIRSF005963 42 332 1.2E-124 T 22-04-2016 IPR003698 Lipoyl synthase GO:0009107|GO:0016992|GO:0051539 KEGG: 00785+2.8.1.8|MetaCyc: PWY-6987|MetaCyc: PWY-7382|UniPathway: UPA00538 SRM_RS05210 6b7a6a6f8b6a29d74ee0bb2c31cc0815 332 SMART SM00729 105 310 3.3E-14 T 22-04-2016 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 SRM_RS05210 6b7a6a6f8b6a29d74ee0bb2c31cc0815 332 Pfam PF04055 Radical SAM superfamily 112 268 4.5E-16 T 22-04-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 SRM_RS05210 6b7a6a6f8b6a29d74ee0bb2c31cc0815 332 Hamap MF_00206 Lipoyl synthase [lipA]. 59 332 127.606 T 22-04-2016 IPR003698 Lipoyl synthase GO:0009107|GO:0016992|GO:0051539 KEGG: 00785+2.8.1.8|MetaCyc: PWY-6987|MetaCyc: PWY-7382|UniPathway: UPA00538 SRM_RS05210 6b7a6a6f8b6a29d74ee0bb2c31cc0815 332 Gene3D G3DSA:3.20.20.70 72 330 1.0E-66 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 SRM_RS08115 e3ea9fa75877c8afcff064ea76dca571 337 Gene3D G3DSA:3.90.180.10 10 143 1.6E-12 T 22-04-2016 IPR011032 GroES-like SRM_RS08115 e3ea9fa75877c8afcff064ea76dca571 337 TIGRFAM TIGR02823 oxido_YhdH: putative quinone oxidoreductase, YhdH/YhfP family 4 331 3.0E-120 T 22-04-2016 IPR014188 Acrylyl-CoA reductase AcuI SRM_RS08115 e3ea9fa75877c8afcff064ea76dca571 337 SUPERFAMILY SSF50129 4 149 9.43E-35 T 22-04-2016 IPR011032 GroES-like SRM_RS08115 e3ea9fa75877c8afcff064ea76dca571 337 PANTHER PTHR11695 16 334 8.7E-125 T 22-04-2016 IPR002085 Alcohol dehydrogenase superfamily, zinc-type GO:0008270|GO:0016491|GO:0055114 SRM_RS08115 e3ea9fa75877c8afcff064ea76dca571 337 PANTHER PTHR11695:SF13 16 334 8.7E-125 T 22-04-2016 IPR014188 Acrylyl-CoA reductase AcuI SRM_RS08115 e3ea9fa75877c8afcff064ea76dca571 337 SUPERFAMILY SSF51735 120 293 4.28E-35 T 22-04-2016 IPR016040 NAD(P)-binding domain SRM_RS08115 e3ea9fa75877c8afcff064ea76dca571 337 SMART SM00829 12 329 5.7E-8 T 22-04-2016 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 SRM_RS08115 e3ea9fa75877c8afcff064ea76dca571 337 Gene3D G3DSA:3.40.50.720 144 296 9.3E-67 T 22-04-2016 IPR016040 NAD(P)-binding domain SRM_RS08115 e3ea9fa75877c8afcff064ea76dca571 337 Pfam PF00107 Zinc-binding dehydrogenase 164 276 1.9E-13 T 22-04-2016 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 SRM_RS11025 d249b366db11116a4bc277595c517efc 670 PANTHER PTHR38787:SF1 294 481 1.8E-108 T 22-04-2016 SRM_RS11025 d249b366db11116a4bc277595c517efc 670 PANTHER PTHR38787:SF1 63 259 1.8E-108 T 22-04-2016 SRM_RS11025 d249b366db11116a4bc277595c517efc 670 PANTHER PTHR38787 294 481 1.8E-108 T 22-04-2016 SRM_RS11025 d249b366db11116a4bc277595c517efc 670 PANTHER PTHR38787 63 259 1.8E-108 T 22-04-2016 SRM_RS11025 d249b366db11116a4bc277595c517efc 670 TIGRFAM TIGR04312 choice_anch_B: choice-of-anchor B domain 72 259 1.2E-59 T 22-04-2016 IPR027589 Choice-of-anchor B domain SRM_RS11025 d249b366db11116a4bc277595c517efc 670 TIGRFAM TIGR04312 choice_anch_B: choice-of-anchor B domain 269 484 2.9E-74 T 22-04-2016 IPR027589 Choice-of-anchor B domain SRM_RS11025 d249b366db11116a4bc277595c517efc 670 TIGRFAM TIGR04183 Por_Secre_tail: Por secretion system C-terminal sorting domain 592 668 5.3E-7 T 22-04-2016 IPR026444 Secretion system C-terminal sorting domain SRM_RS06995 63237ec283dc124e9f69cb46894b0b54 691 PANTHER PTHR24029 6 688 0.0 T 22-04-2016 IPR004807 UvrABC system, subunit B GO:0003677|GO:0005524|GO:0006281|GO:0006289|GO:0009381|GO:0009432 SRM_RS06995 63237ec283dc124e9f69cb46894b0b54 691 Pfam PF00271 Helicase conserved C-terminal domain 440 553 1.1E-17 T 22-04-2016 IPR001650 Helicase, C-terminal SRM_RS06995 63237ec283dc124e9f69cb46894b0b54 691 SUPERFAMILY SSF52540 338 566 7.12E-35 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SRM_RS06995 63237ec283dc124e9f69cb46894b0b54 691 Gene3D G3DSA:3.30.2060.10 169 244 4.8E-10 T 22-04-2016 SRM_RS06995 63237ec283dc124e9f69cb46894b0b54 691 Hamap MF_00204 UvrABC system protein B [uvrB]. 10 685 42.793 T 22-04-2016 IPR004807 UvrABC system, subunit B GO:0003677|GO:0005524|GO:0006281|GO:0006289|GO:0009381|GO:0009432 SRM_RS06995 63237ec283dc124e9f69cb46894b0b54 691 SMART SM00487 16 434 6.9E-27 T 22-04-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain SRM_RS06995 63237ec283dc124e9f69cb46894b0b54 691 SMART SM00490 468 554 2.0E-17 T 22-04-2016 IPR001650 Helicase, C-terminal SRM_RS06995 63237ec283dc124e9f69cb46894b0b54 691 Gene3D G3DSA:4.10.860.10 640 686 4.4E-14 T 22-04-2016 IPR001943 UVR domain GO:0005515 SRM_RS06995 63237ec283dc124e9f69cb46894b0b54 691 Pfam PF02151 UvrB/uvrC motif 651 685 1.7E-9 T 22-04-2016 IPR001943 UVR domain GO:0005515 SRM_RS06995 63237ec283dc124e9f69cb46894b0b54 691 SUPERFAMILY SSF46600 641 685 1.06E-10 T 22-04-2016 IPR001943 UVR domain GO:0005515 SRM_RS06995 63237ec283dc124e9f69cb46894b0b54 691 SUPERFAMILY SSF52540 10 423 4.53E-136 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SRM_RS06995 63237ec283dc124e9f69cb46894b0b54 691 TIGRFAM TIGR00631 uvrb: excinuclease ABC subunit B 11 682 0.0 T 22-04-2016 IPR004807 UvrABC system, subunit B GO:0003677|GO:0005524|GO:0006281|GO:0006289|GO:0009381|GO:0009432 SRM_RS06995 63237ec283dc124e9f69cb46894b0b54 691 Pfam PF04851 Type III restriction enzyme, res subunit 20 99 1.2E-9 T 22-04-2016 IPR006935 Helicase/UvrB, N-terminal GO:0003677|GO:0005524|GO:0016787 SRM_RS06995 63237ec283dc124e9f69cb46894b0b54 691 Gene3D G3DSA:3.40.50.300 396 417 2.2E-54 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SRM_RS06995 63237ec283dc124e9f69cb46894b0b54 691 Gene3D G3DSA:3.40.50.300 286 346 2.2E-54 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SRM_RS06995 63237ec283dc124e9f69cb46894b0b54 691 Gene3D G3DSA:3.40.50.300 13 96 2.2E-54 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SRM_RS06995 63237ec283dc124e9f69cb46894b0b54 691 Gene3D G3DSA:3.40.50.300 433 594 7.6E-39 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SRM_RS06995 63237ec283dc124e9f69cb46894b0b54 691 Pfam PF12344 Ultra-violet resistance protein B 560 600 2.9E-19 T 22-04-2016 IPR024759 UvrB, YAD/RRR-motif-containing domain SRM_RS12155 081f3641ae4ac1fb632e9b5cc2029c91 240 Gene3D G3DSA:3.30.70.260 59 135 1.3E-25 T 22-04-2016 SRM_RS12155 081f3641ae4ac1fb632e9b5cc2029c91 240 SUPERFAMILY SSF55021 59 133 4.31E-17 T 22-04-2016 SRM_RS12155 081f3641ae4ac1fb632e9b5cc2029c91 240 Pfam PF13710 ACT domain 71 126 9.5E-11 T 22-04-2016 SRM_RS12155 081f3641ae4ac1fb632e9b5cc2029c91 240 TIGRFAM TIGR00119 acolac_sm: acetolactate synthase, small subunit 58 213 4.5E-56 T 22-04-2016 IPR004789 Acetolactate synthase, small subunit GO:0003984|GO:0009082 KEGG: 00290+2.2.1.6|KEGG: 00650+2.2.1.6|KEGG: 00660+2.2.1.6|KEGG: 00770+2.2.1.6|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5938|MetaCyc: PWY-5939|MetaCyc: PWY-6389|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 SRM_RS12155 081f3641ae4ac1fb632e9b5cc2029c91 240 Pfam PF10369 Small subunit of acetolactate synthase 141 213 7.6E-26 T 22-04-2016 IPR019455 Acetolactate synthase, small subunit, C-terminal KEGG: 00290+2.2.1.6|KEGG: 00650+2.2.1.6|KEGG: 00660+2.2.1.6|KEGG: 00770+2.2.1.6|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5938|MetaCyc: PWY-5939|MetaCyc: PWY-6389|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 SRM_RS12155 081f3641ae4ac1fb632e9b5cc2029c91 240 ProDom PD002844 SMALL SUBUNIT ACETOLACTATE SYNTHASE SYNTHASE TRANSFERASE ACID BIOSYNTHESIS III LYASE 59 133 2.0E-20 T 22-04-2016 SRM_RS12155 081f3641ae4ac1fb632e9b5cc2029c91 240 PANTHER PTHR30239 56 213 2.6E-63 T 22-04-2016 SRM_RS12155 081f3641ae4ac1fb632e9b5cc2029c91 240 SUPERFAMILY SSF55021 136 214 1.05E-24 T 22-04-2016 SRM_RS12155 081f3641ae4ac1fb632e9b5cc2029c91 240 Gene3D G3DSA:3.30.70.1150 140 214 1.3E-26 T 22-04-2016 SRM_RS05945 84237b204ad83ddba8e43479e5830586 863 SUPERFAMILY SSF47323 678 861 2.06E-34 T 22-04-2016 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 SRM_RS05945 84237b204ad83ddba8e43479e5830586 863 Pfam PF09334 tRNA synthetases class I (M) 40 172 4.2E-20 T 22-04-2016 IPR015413 Methionyl/Leucyl tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 SRM_RS05945 84237b204ad83ddba8e43479e5830586 863 Pfam PF13603 Leucyl-tRNA synthetase, Domain 2 221 403 2.8E-64 T 22-04-2016 IPR025709 Leucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 KEGG: 00970+6.1.1.4 SRM_RS05945 84237b204ad83ddba8e43479e5830586 863 PANTHER PTHR11946 1 207 0.0 T 22-04-2016 SRM_RS05945 84237b204ad83ddba8e43479e5830586 863 PANTHER PTHR11946 474 576 0.0 T 22-04-2016 SRM_RS05945 84237b204ad83ddba8e43479e5830586 863 PANTHER PTHR11946 240 265 0.0 T 22-04-2016 SRM_RS05945 84237b204ad83ddba8e43479e5830586 863 PANTHER PTHR11946 631 861 0.0 T 22-04-2016 SRM_RS05945 84237b204ad83ddba8e43479e5830586 863 PANTHER PTHR11946 287 456 0.0 T 22-04-2016 SRM_RS05945 84237b204ad83ddba8e43479e5830586 863 TIGRFAM TIGR00396 leuS_bact: leucine--tRNA ligase 5 861 0.0 T 22-04-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4 SRM_RS05945 84237b204ad83ddba8e43479e5830586 863 Gene3D G3DSA:3.90.740.10 223 424 4.0E-52 T 22-04-2016 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 Reactome: REACT_71 SRM_RS05945 84237b204ad83ddba8e43479e5830586 863 SUPERFAMILY SSF52374 416 684 3.75E-142 T 22-04-2016 SRM_RS05945 84237b204ad83ddba8e43479e5830586 863 SUPERFAMILY SSF52374 1 226 3.75E-142 T 22-04-2016 SRM_RS05945 84237b204ad83ddba8e43479e5830586 863 Gene3D G3DSA:3.40.50.620 634 663 1.5E-163 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold SRM_RS05945 84237b204ad83ddba8e43479e5830586 863 Gene3D G3DSA:3.40.50.620 425 578 1.5E-163 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold SRM_RS05945 84237b204ad83ddba8e43479e5830586 863 Gene3D G3DSA:3.40.50.620 2 222 1.5E-163 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold SRM_RS05945 84237b204ad83ddba8e43479e5830586 863 PRINTS PR00985 Leucyl-tRNA synthetase signature 562 572 2.2E-52 T 22-04-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4 SRM_RS05945 84237b204ad83ddba8e43479e5830586 863 PRINTS PR00985 Leucyl-tRNA synthetase signature 215 234 2.2E-52 T 22-04-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4 SRM_RS05945 84237b204ad83ddba8e43479e5830586 863 PRINTS PR00985 Leucyl-tRNA synthetase signature 529 551 2.2E-52 T 22-04-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4 SRM_RS05945 84237b204ad83ddba8e43479e5830586 863 PRINTS PR00985 Leucyl-tRNA synthetase signature 490 508 2.2E-52 T 22-04-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4 SRM_RS05945 84237b204ad83ddba8e43479e5830586 863 PRINTS PR00985 Leucyl-tRNA synthetase signature 186 199 2.2E-52 T 22-04-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4 SRM_RS05945 84237b204ad83ddba8e43479e5830586 863 PRINTS PR00985 Leucyl-tRNA synthetase signature 154 170 2.2E-52 T 22-04-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4 SRM_RS05945 84237b204ad83ddba8e43479e5830586 863 PRINTS PR00985 Leucyl-tRNA synthetase signature 128 145 2.2E-52 T 22-04-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4 SRM_RS05945 84237b204ad83ddba8e43479e5830586 863 Hamap MF_00049_B Leucine--tRNA ligase [leuS]. 2 862 23.033 T 22-04-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4 SRM_RS05945 84237b204ad83ddba8e43479e5830586 863 Pfam PF08264 Anticodon-binding domain of tRNA 709 824 7.8E-18 T 22-04-2016 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding GO:0000166|GO:0006418 Reactome: REACT_71 SRM_RS05945 84237b204ad83ddba8e43479e5830586 863 SUPERFAMILY SSF50677 226 415 3.87E-48 T 22-04-2016 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 Reactome: REACT_71 SRM_RS05945 84237b204ad83ddba8e43479e5830586 863 PANTHER PTHR11946:SF7 1 207 0.0 T 22-04-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4 SRM_RS05945 84237b204ad83ddba8e43479e5830586 863 PANTHER PTHR11946:SF7 474 576 0.0 T 22-04-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4 SRM_RS05945 84237b204ad83ddba8e43479e5830586 863 PANTHER PTHR11946:SF7 240 265 0.0 T 22-04-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4 SRM_RS05945 84237b204ad83ddba8e43479e5830586 863 PANTHER PTHR11946:SF7 631 861 0.0 T 22-04-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4 SRM_RS05945 84237b204ad83ddba8e43479e5830586 863 PANTHER PTHR11946:SF7 287 456 0.0 T 22-04-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4 SRM_RS05945 84237b204ad83ddba8e43479e5830586 863 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 629 667 3.8E-8 T 22-04-2016 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 SRM_RS05945 84237b204ad83ddba8e43479e5830586 863 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 417 575 9.4E-5 T 22-04-2016 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 SRM_RS05945 84237b204ad83ddba8e43479e5830586 863 Gene3D G3DSA:1.10.730.10 664 797 1.8E-46 T 22-04-2016 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 SRM_RS02140 63a0bf5dd0836051abd98b2055112a5b 76 PRINTS PR00352 3Fe-4S ferredoxin signature 23 33 2.4E-5 T 22-04-2016 IPR001080 3Fe-4S ferredoxin GO:0005506|GO:0009055 SRM_RS02140 63a0bf5dd0836051abd98b2055112a5b 76 PRINTS PR00352 3Fe-4S ferredoxin signature 53 65 2.4E-5 T 22-04-2016 IPR001080 3Fe-4S ferredoxin GO:0005506|GO:0009055 SRM_RS02140 63a0bf5dd0836051abd98b2055112a5b 76 PRINTS PR00352 3Fe-4S ferredoxin signature 12 23 2.4E-5 T 22-04-2016 IPR001080 3Fe-4S ferredoxin GO:0005506|GO:0009055 SRM_RS02140 63a0bf5dd0836051abd98b2055112a5b 76 SUPERFAMILY SSF54862 9 69 2.19E-9 T 22-04-2016 SRM_RS02140 63a0bf5dd0836051abd98b2055112a5b 76 Pfam PF13459 4Fe-4S single cluster domain 10 67 9.1E-11 T 22-04-2016 SRM_RS02140 63a0bf5dd0836051abd98b2055112a5b 76 PANTHER PTHR36923 6 72 1.6E-12 T 22-04-2016 SRM_RS02140 63a0bf5dd0836051abd98b2055112a5b 76 Gene3D G3DSA:3.30.70.20 9 73 4.1E-15 T 22-04-2016 SRM_RS02695 769bc654155fbd926767875e3a29f768 766 Pfam PF13087 AAA domain 533 741 5.0E-53 T 22-04-2016 SRM_RS02695 769bc654155fbd926767875e3a29f768 766 Pfam PF13086 AAA domain 276 524 1.7E-55 T 22-04-2016 SRM_RS02695 769bc654155fbd926767875e3a29f768 766 SMART SM00487 272 562 0.0059 T 22-04-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain SRM_RS02695 769bc654155fbd926767875e3a29f768 766 TIGRFAM TIGR00376 TIGR00376: putative DNA helicase 97 761 7.7E-181 T 22-04-2016 IPR004483 Helicase SMUBP-2/Hcs1-like GO:0003677|GO:0005524 SRM_RS02695 769bc654155fbd926767875e3a29f768 766 PANTHER PTHR10887 81 758 5.8E-167 T 22-04-2016 SRM_RS02695 769bc654155fbd926767875e3a29f768 766 Pfam PF03880 DbpA RNA binding domain 19 75 1.8E-11 T 22-04-2016 IPR005580 DbpA, RNA-binding domain SRM_RS02695 769bc654155fbd926767875e3a29f768 766 Gene3D G3DSA:3.40.50.300 263 385 9.7E-57 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SRM_RS02695 769bc654155fbd926767875e3a29f768 766 Gene3D G3DSA:3.40.50.300 482 586 9.7E-57 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SRM_RS02695 769bc654155fbd926767875e3a29f768 766 SUPERFAMILY SSF52540 272 396 2.72E-65 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SRM_RS02695 769bc654155fbd926767875e3a29f768 766 SUPERFAMILY SSF52540 437 744 2.72E-65 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SRM_RS02695 769bc654155fbd926767875e3a29f768 766 SMART SM00382 290 542 1.8E-4 T 22-04-2016 IPR003593 AAA+ ATPase domain SRM_RS05410 7f0f1f43c1d55ae033029fc9142b3f4e 1144 Gene3D G3DSA:3.30.450.20 487 604 7.0E-21 T 22-04-2016 SRM_RS05410 7f0f1f43c1d55ae033029fc9142b3f4e 1144 Gene3D G3DSA:3.30.450.20 243 369 2.2E-18 T 22-04-2016 SRM_RS05410 7f0f1f43c1d55ae033029fc9142b3f4e 1144 PANTHER PTHR24423 236 386 4.9E-105 T 22-04-2016 SRM_RS05410 7f0f1f43c1d55ae033029fc9142b3f4e 1144 PANTHER PTHR24423 494 568 4.9E-105 T 22-04-2016 SRM_RS05410 7f0f1f43c1d55ae033029fc9142b3f4e 1144 PANTHER PTHR24423 694 752 4.9E-105 T 22-04-2016 SRM_RS05410 7f0f1f43c1d55ae033029fc9142b3f4e 1144 PANTHER PTHR24423 918 1141 4.9E-105 T 22-04-2016 SRM_RS05410 7f0f1f43c1d55ae033029fc9142b3f4e 1144 SMART SM00086 569 606 2.3 T 22-04-2016 IPR001610 PAC motif SRM_RS05410 7f0f1f43c1d55ae033029fc9142b3f4e 1144 SMART SM00086 694 735 0.088 T 22-04-2016 IPR001610 PAC motif SRM_RS05410 7f0f1f43c1d55ae033029fc9142b3f4e 1144 SMART SM00086 451 488 2.5 T 22-04-2016 IPR001610 PAC motif SRM_RS05410 7f0f1f43c1d55ae033029fc9142b3f4e 1144 SMART SM00086 331 371 12.0 T 22-04-2016 IPR001610 PAC motif SRM_RS05410 7f0f1f43c1d55ae033029fc9142b3f4e 1144 Gene3D G3DSA:3.30.565.10 987 1141 5.2E-42 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SRM_RS05410 7f0f1f43c1d55ae033029fc9142b3f4e 1144 SUPERFAMILY SSF55874 977 1141 1.17E-40 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SRM_RS05410 7f0f1f43c1d55ae033029fc9142b3f4e 1144 SUPERFAMILY SSF47384 908 989 3.34E-17 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SRM_RS05410 7f0f1f43c1d55ae033029fc9142b3f4e 1144 SMART SM00387 1033 1144 2.3E-34 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SRM_RS05410 7f0f1f43c1d55ae033029fc9142b3f4e 1144 Pfam PF13426 PAS domain 390 487 3.6E-8 T 22-04-2016 IPR000014 PAS domain SRM_RS05410 7f0f1f43c1d55ae033029fc9142b3f4e 1144 Pfam PF13426 PAS domain 261 370 1.6E-11 T 22-04-2016 IPR000014 PAS domain SRM_RS05410 7f0f1f43c1d55ae033029fc9142b3f4e 1144 Pfam PF13426 PAS domain 507 605 1.0E-9 T 22-04-2016 IPR000014 PAS domain SRM_RS05410 7f0f1f43c1d55ae033029fc9142b3f4e 1144 SMART SM00091 251 318 9.0E-5 T 22-04-2016 IPR000014 PAS domain SRM_RS05410 7f0f1f43c1d55ae033029fc9142b3f4e 1144 SMART SM00091 496 563 0.0089 T 22-04-2016 IPR000014 PAS domain SRM_RS05410 7f0f1f43c1d55ae033029fc9142b3f4e 1144 SMART SM00091 379 445 0.25 T 22-04-2016 IPR000014 PAS domain SRM_RS05410 7f0f1f43c1d55ae033029fc9142b3f4e 1144 PRINTS PR00344 Bacterial sensor protein C-terminal signature 1069 1083 1.94E-14 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SRM_RS05410 7f0f1f43c1d55ae033029fc9142b3f4e 1144 PRINTS PR00344 Bacterial sensor protein C-terminal signature 1104 1122 1.94E-14 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SRM_RS05410 7f0f1f43c1d55ae033029fc9142b3f4e 1144 PRINTS PR00344 Bacterial sensor protein C-terminal signature 1128 1141 1.94E-14 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SRM_RS05410 7f0f1f43c1d55ae033029fc9142b3f4e 1144 PRINTS PR00344 Bacterial sensor protein C-terminal signature 1087 1097 1.94E-14 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SRM_RS05410 7f0f1f43c1d55ae033029fc9142b3f4e 1144 SUPERFAMILY SSF55785 254 371 7.15E-18 T 22-04-2016 IPR000014 PAS domain SRM_RS05410 7f0f1f43c1d55ae033029fc9142b3f4e 1144 Gene3D G3DSA:3.30.450.20 607 735 2.3E-11 T 22-04-2016 SRM_RS05410 7f0f1f43c1d55ae033029fc9142b3f4e 1144 Gene3D G3DSA:3.30.450.20 382 486 9.6E-16 T 22-04-2016 SRM_RS05410 7f0f1f43c1d55ae033029fc9142b3f4e 1144 Pfam PF08448 PAS fold 631 736 1.4E-10 T 22-04-2016 IPR013656 PAS fold-4 SRM_RS05410 7f0f1f43c1d55ae033029fc9142b3f4e 1144 Pfam PF13185 GAF domain 772 891 9.2E-8 T 22-04-2016 IPR003018 GAF domain GO:0005515 SRM_RS05410 7f0f1f43c1d55ae033029fc9142b3f4e 1144 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 1034 1141 1.0E-25 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SRM_RS05410 7f0f1f43c1d55ae033029fc9142b3f4e 1144 SMART SM00388 920 987 9.3E-17 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SRM_RS05410 7f0f1f43c1d55ae033029fc9142b3f4e 1144 SUPERFAMILY SSF55785 602 727 1.43E-10 T 22-04-2016 IPR000014 PAS domain SRM_RS05410 7f0f1f43c1d55ae033029fc9142b3f4e 1144 SUPERFAMILY SSF55785 396 496 1.71E-16 T 22-04-2016 IPR000014 PAS domain SRM_RS05410 7f0f1f43c1d55ae033029fc9142b3f4e 1144 Pfam PF00512 His Kinase A (phospho-acceptor) domain 920 987 4.0E-13 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SRM_RS05410 7f0f1f43c1d55ae033029fc9142b3f4e 1144 Gene3D G3DSA:1.10.287.130 913 983 2.8E-14 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SRM_RS05410 7f0f1f43c1d55ae033029fc9142b3f4e 1144 SUPERFAMILY SSF55781 732 891 2.67E-11 T 22-04-2016 IPR029016 GAF domain-like SRM_RS05410 7f0f1f43c1d55ae033029fc9142b3f4e 1144 SUPERFAMILY SSF55781 102 246 9.81E-15 T 22-04-2016 IPR029016 GAF domain-like SRM_RS05410 7f0f1f43c1d55ae033029fc9142b3f4e 1144 SUPERFAMILY SSF55785 507 614 2.09E-19 T 22-04-2016 IPR000014 PAS domain SRM_RS05410 7f0f1f43c1d55ae033029fc9142b3f4e 1144 Gene3D G3DSA:3.30.450.40 738 906 8.8E-10 T 22-04-2016 IPR029016 GAF domain-like SRM_RS05410 7f0f1f43c1d55ae033029fc9142b3f4e 1144 Gene3D G3DSA:3.30.450.40 97 242 1.1E-14 T 22-04-2016 IPR029016 GAF domain-like SRM_RS06505 edf59a99d99fec73c28fc29b9b6187d0 236 Pfam PF00189 Ribosomal protein S3, C-terminal domain 119 201 8.2E-35 T 22-04-2016 SRM_RS06505 edf59a99d99fec73c28fc29b9b6187d0 236 Pfam PF07650 KH domain 37 110 3.3E-19 T 22-04-2016 IPR004044 K Homology domain, type 2 GO:0003723 SRM_RS06505 edf59a99d99fec73c28fc29b9b6187d0 236 SUPERFAMILY SSF54821 106 205 1.96E-36 T 22-04-2016 IPR001351 Ribosomal protein S3, C-terminal GO:0003735|GO:0005840|GO:0006412 SRM_RS06505 edf59a99d99fec73c28fc29b9b6187d0 236 PANTHER PTHR11760 2 234 2.0E-117 T 22-04-2016 SRM_RS06505 edf59a99d99fec73c28fc29b9b6187d0 236 ProSitePatterns PS00548 Ribosomal protein S3 signature. 162 196 - T 22-04-2016 IPR018280 Ribosomal protein S3, conserved site SRM_RS06505 edf59a99d99fec73c28fc29b9b6187d0 236 SUPERFAMILY SSF54814 2 105 7.85E-34 T 22-04-2016 IPR009019 K homology domain, prokaryotic type GO:0003723 SRM_RS06505 edf59a99d99fec73c28fc29b9b6187d0 236 Gene3D G3DSA:3.30.300.20 18 106 4.9E-27 T 22-04-2016 IPR015946 K homology domain-like, alpha/beta SRM_RS06505 edf59a99d99fec73c28fc29b9b6187d0 236 TIGRFAM TIGR01009 rpsC_bact: ribosomal protein uS3 1 208 1.4E-82 T 22-04-2016 IPR005704 Ribosomal protein S3, bacterial GO:0003735|GO:0006412|GO:0015935 SRM_RS06505 edf59a99d99fec73c28fc29b9b6187d0 236 Hamap MF_01309_B 30S ribosomal protein S3 [rpsC]. 1 205 35.694 T 22-04-2016 IPR005704 Ribosomal protein S3, bacterial GO:0003735|GO:0006412|GO:0015935 SRM_RS06505 edf59a99d99fec73c28fc29b9b6187d0 236 PANTHER PTHR11760:SF19 2 234 2.0E-117 T 22-04-2016 SRM_RS06505 edf59a99d99fec73c28fc29b9b6187d0 236 SMART SM00322 59 124 4.5E-6 T 22-04-2016 IPR004087 K Homology domain GO:0003676 SRM_RS06505 edf59a99d99fec73c28fc29b9b6187d0 236 Gene3D G3DSA:3.30.1140.32 108 206 6.2E-40 T 22-04-2016 IPR001351 Ribosomal protein S3, C-terminal GO:0003735|GO:0005840|GO:0006412 SRM_RS03130 a61c818218eec316708950feaaa45f6c 403 Pfam PF13439 Glycosyltransferase Family 4 20 171 1.0E-14 T 22-04-2016 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain SRM_RS03130 a61c818218eec316708950feaaa45f6c 403 Gene3D G3DSA:3.40.50.2000 156 356 1.1E-31 T 22-04-2016 SRM_RS03130 a61c818218eec316708950feaaa45f6c 403 PANTHER PTHR12526:SF374 18 385 1.2E-52 T 22-04-2016 SRM_RS03130 a61c818218eec316708950feaaa45f6c 403 Pfam PF13692 Glycosyl transferases group 1 203 341 6.0E-30 T 22-04-2016 SRM_RS03130 a61c818218eec316708950feaaa45f6c 403 PANTHER PTHR12526 18 385 1.2E-52 T 22-04-2016 SRM_RS03130 a61c818218eec316708950feaaa45f6c 403 SUPERFAMILY SSF53756 16 382 5.1E-69 T 22-04-2016 SRM_RS11140 8f29ce5cc7867c85ddf805637b38a21a 279 Gene3D G3DSA:1.10.10.10 210 275 6.5E-24 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SRM_RS11140 8f29ce5cc7867c85ddf805637b38a21a 279 Pfam PF04542 Sigma-70 region 2 48 115 1.5E-18 T 22-04-2016 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 SRM_RS11140 8f29ce5cc7867c85ddf805637b38a21a 279 Pfam PF04545 Sigma-70, region 4 214 267 3.1E-17 T 22-04-2016 IPR007630 RNA polymerase sigma-70 region 4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 SRM_RS11140 8f29ce5cc7867c85ddf805637b38a21a 279 Gene3D G3DSA:1.10.10.10 119 167 8.5E-17 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SRM_RS11140 8f29ce5cc7867c85ddf805637b38a21a 279 PANTHER PTHR30603 13 275 5.6E-104 T 22-04-2016 SRM_RS11140 8f29ce5cc7867c85ddf805637b38a21a 279 PRINTS PR00046 Major sigma-70 factor signature 70 83 1.4E-24 T 22-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 SRM_RS11140 8f29ce5cc7867c85ddf805637b38a21a 279 PRINTS PR00046 Major sigma-70 factor signature 218 230 1.4E-24 T 22-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 SRM_RS11140 8f29ce5cc7867c85ddf805637b38a21a 279 PRINTS PR00046 Major sigma-70 factor signature 239 254 1.4E-24 T 22-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 SRM_RS11140 8f29ce5cc7867c85ddf805637b38a21a 279 PRINTS PR00046 Major sigma-70 factor signature 254 265 1.4E-24 T 22-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 SRM_RS11140 8f29ce5cc7867c85ddf805637b38a21a 279 PRINTS PR00046 Major sigma-70 factor signature 94 102 1.4E-24 T 22-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 SRM_RS11140 8f29ce5cc7867c85ddf805637b38a21a 279 SUPERFAMILY SSF88946 5 115 2.35E-43 T 22-04-2016 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 SRM_RS11140 8f29ce5cc7867c85ddf805637b38a21a 279 Pfam PF00140 Sigma-70 factor, region 1.2 10 41 2.2E-14 T 22-04-2016 IPR009042 RNA polymerase sigma-70 region 1.2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 SRM_RS11140 8f29ce5cc7867c85ddf805637b38a21a 279 PANTHER PTHR30603:SF0 13 275 5.6E-104 T 22-04-2016 SRM_RS11140 8f29ce5cc7867c85ddf805637b38a21a 279 Gene3D G3DSA:1.10.601.10 4 115 1.2E-50 T 22-04-2016 SRM_RS11140 8f29ce5cc7867c85ddf805637b38a21a 279 Pfam PF04539 Sigma-70 region 3 126 201 1.2E-22 T 22-04-2016 IPR007624 RNA polymerase sigma-70 region 3 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 SRM_RS11140 8f29ce5cc7867c85ddf805637b38a21a 279 SUPERFAMILY SSF88659 177 272 8.97E-25 T 22-04-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 SRM_RS11140 8f29ce5cc7867c85ddf805637b38a21a 279 PIRSF PIRSF000770 2 278 1.4E-39 T 22-04-2016 IPR016263 RNA polymerase sporulation-specific sigma factor GO:0003677|GO:0006351|GO:0016987|GO:0030435 SRM_RS11140 8f29ce5cc7867c85ddf805637b38a21a 279 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 41 268 1.1E-33 T 22-04-2016 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 SRM_RS11140 8f29ce5cc7867c85ddf805637b38a21a 279 SUPERFAMILY SSF88659 119 193 8.28E-18 T 22-04-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 SRM_RS07965 03927992808b250bfd1c343899e9a715 275 PANTHER PTHR20854:SF38 1 265 1.5E-81 T 22-04-2016 SRM_RS07965 03927992808b250bfd1c343899e9a715 275 Pfam PF00459 Inositol monophosphatase family 7 253 1.0E-44 T 22-04-2016 IPR000760 Inositol monophosphatase GO:0046854 SRM_RS07965 03927992808b250bfd1c343899e9a715 275 PRINTS PR00377 Inositol monophosphatase superfamily signature 60 76 1.1E-12 T 22-04-2016 IPR000760 Inositol monophosphatase GO:0046854 SRM_RS07965 03927992808b250bfd1c343899e9a715 275 PRINTS PR00377 Inositol monophosphatase superfamily signature 81 97 1.1E-12 T 22-04-2016 IPR000760 Inositol monophosphatase GO:0046854 SRM_RS07965 03927992808b250bfd1c343899e9a715 275 PRINTS PR00377 Inositol monophosphatase superfamily signature 38 58 1.1E-12 T 22-04-2016 IPR000760 Inositol monophosphatase GO:0046854 SRM_RS07965 03927992808b250bfd1c343899e9a715 275 ProSitePatterns PS00629 Inositol monophosphatase family signature 1. 81 93 - T 22-04-2016 IPR020583 Inositol monophosphatase, metal-binding site SRM_RS07965 03927992808b250bfd1c343899e9a715 275 Gene3D G3DSA:3.30.540.10 4 153 1.1E-41 T 22-04-2016 SRM_RS07965 03927992808b250bfd1c343899e9a715 275 PANTHER PTHR20854 1 265 1.5E-81 T 22-04-2016 IPR000760 Inositol monophosphatase GO:0046854 SRM_RS07965 03927992808b250bfd1c343899e9a715 275 SUPERFAMILY SSF56655 4 266 2.75E-63 T 22-04-2016 SRM_RS07965 03927992808b250bfd1c343899e9a715 275 Gene3D G3DSA:3.40.190.80 154 266 1.5E-13 T 22-04-2016 SRM_RS13745 1e99a06b6aa3467d521998f66a61fb1f 270 Gene3D G3DSA:3.40.50.150 66 230 3.4E-44 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SRM_RS13745 1e99a06b6aa3467d521998f66a61fb1f 270 PANTHER PTHR10108 70 224 4.1E-45 T 22-04-2016 SRM_RS13745 1e99a06b6aa3467d521998f66a61fb1f 270 Pfam PF13847 Methyltransferase domain 73 195 1.3E-35 T 22-04-2016 IPR025714 Methyltransferase domain SRM_RS13745 1e99a06b6aa3467d521998f66a61fb1f 270 SUPERFAMILY SSF53335 60 225 7.59E-43 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SRM_RS13745 1e99a06b6aa3467d521998f66a61fb1f 270 PANTHER PTHR10108:SF911 70 224 4.1E-45 T 22-04-2016 SRM_RS07505 40543a31a17f7bac535db0be09d04b58 436 Gene3D G3DSA:3.40.309.10 242 389 2.7E-39 T 22-04-2016 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0008152|GO:0016491|GO:0016620|GO:0055114 SRM_RS07505 40543a31a17f7bac535db0be09d04b58 436 Gene3D G3DSA:3.40.605.10 18 239 1.5E-97 T 22-04-2016 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 SRM_RS07505 40543a31a17f7bac535db0be09d04b58 436 Gene3D G3DSA:3.40.605.10 390 431 1.5E-97 T 22-04-2016 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 SRM_RS07505 40543a31a17f7bac535db0be09d04b58 436 TIGRFAM TIGR00407 proA: glutamate-5-semialdehyde dehydrogenase 29 420 3.0E-144 T 22-04-2016 IPR000965 GPR domain GO:0004350|GO:0006561|GO:0055114 KEGG: 00330+1.2.1.41|KEGG: 00332+1.2.1.41|MetaCyc: PWY-3341|MetaCyc: PWY-6922|UniPathway: UPA00098 SRM_RS07505 40543a31a17f7bac535db0be09d04b58 436 Pfam PF00171 Aldehyde dehydrogenase family 18 297 1.3E-16 T 22-04-2016 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 SRM_RS07505 40543a31a17f7bac535db0be09d04b58 436 PANTHER PTHR11063:SF8 1 431 7.7E-172 T 22-04-2016 SRM_RS07505 40543a31a17f7bac535db0be09d04b58 436 PIRSF PIRSF000151 13 432 4.0E-169 T 22-04-2016 IPR012134 Glutamate-5-semialdehyde dehydrogenase GO:0004350|GO:0006561|GO:0050661|GO:0055114 KEGG: 00330+1.2.1.41|KEGG: 00332+1.2.1.41|MetaCyc: PWY-3341|MetaCyc: PWY-6922|UniPathway: UPA00098 SRM_RS07505 40543a31a17f7bac535db0be09d04b58 436 ProSitePatterns PS01223 Gamma-glutamyl phosphate reductase signature. 338 359 - T 22-04-2016 IPR020593 Gamma-glutamyl phosphate reductase GPR, conserved site GO:0004350|GO:0006561|GO:0055114 KEGG: 00330+1.2.1.41|KEGG: 00332+1.2.1.41|MetaCyc: PWY-3341|MetaCyc: PWY-6922|UniPathway: UPA00098 SRM_RS07505 40543a31a17f7bac535db0be09d04b58 436 SUPERFAMILY SSF53720 21 431 3.67E-114 T 22-04-2016 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 SRM_RS07505 40543a31a17f7bac535db0be09d04b58 436 Hamap MF_00412 Gamma-glutamyl phosphate reductase [proA]. 20 431 41.894 T 22-04-2016 IPR000965 GPR domain GO:0004350|GO:0006561|GO:0055114 KEGG: 00330+1.2.1.41|KEGG: 00332+1.2.1.41|MetaCyc: PWY-3341|MetaCyc: PWY-6922|UniPathway: UPA00098 SRM_RS07505 40543a31a17f7bac535db0be09d04b58 436 PANTHER PTHR11063 1 431 7.7E-172 T 22-04-2016 SRM_RS09920 b40e7a0b8cd7985fb95e2ef8cec7d0f9 474 Gene3D G3DSA:1.10.8.60 341 412 2.6E-26 T 22-04-2016 SRM_RS09920 b40e7a0b8cd7985fb95e2ef8cec7d0f9 474 Gene3D G3DSA:3.40.50.300 165 340 7.3E-55 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SRM_RS09920 b40e7a0b8cd7985fb95e2ef8cec7d0f9 474 Gene3D G3DSA:3.40.50.2300 12 139 3.1E-30 T 22-04-2016 SRM_RS09920 b40e7a0b8cd7985fb95e2ef8cec7d0f9 474 Pfam PF00072 Response regulator receiver domain 13 127 1.4E-21 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SRM_RS09920 b40e7a0b8cd7985fb95e2ef8cec7d0f9 474 SUPERFAMILY SSF52540 167 410 4.61E-71 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SRM_RS09920 b40e7a0b8cd7985fb95e2ef8cec7d0f9 474 SMART SM00382 188 331 3.5E-10 T 22-04-2016 IPR003593 AAA+ ATPase domain SRM_RS09920 b40e7a0b8cd7985fb95e2ef8cec7d0f9 474 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 381 390 - T 22-04-2016 IPR025944 Sigma-54 interaction domain, conserved site SRM_RS09920 b40e7a0b8cd7985fb95e2ef8cec7d0f9 474 Pfam PF02954 Bacterial regulatory protein, Fis family 432 472 6.7E-15 T 22-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 SRM_RS09920 b40e7a0b8cd7985fb95e2ef8cec7d0f9 474 Pfam PF00158 Sigma-54 interaction domain 168 335 5.4E-66 T 22-04-2016 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 SRM_RS09920 b40e7a0b8cd7985fb95e2ef8cec7d0f9 474 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 438 455 2.3E-11 T 22-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 SRM_RS09920 b40e7a0b8cd7985fb95e2ef8cec7d0f9 474 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 455 474 2.3E-11 T 22-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 SRM_RS09920 b40e7a0b8cd7985fb95e2ef8cec7d0f9 474 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 254 269 - T 22-04-2016 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 SRM_RS09920 b40e7a0b8cd7985fb95e2ef8cec7d0f9 474 PANTHER PTHR32071:SF15 12 474 4.0E-175 T 22-04-2016 SRM_RS09920 b40e7a0b8cd7985fb95e2ef8cec7d0f9 474 SUPERFAMILY SSF46689 381 474 9.26E-16 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 SRM_RS09920 b40e7a0b8cd7985fb95e2ef8cec7d0f9 474 PANTHER PTHR32071 12 474 4.0E-175 T 22-04-2016 SRM_RS09920 b40e7a0b8cd7985fb95e2ef8cec7d0f9 474 SUPERFAMILY SSF52172 11 213 7.68E-34 T 22-04-2016 IPR011006 CheY-like superfamily SRM_RS09920 b40e7a0b8cd7985fb95e2ef8cec7d0f9 474 SMART SM00448 11 127 5.4E-25 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SRM_RS09920 b40e7a0b8cd7985fb95e2ef8cec7d0f9 474 Gene3D G3DSA:1.10.10.60 430 471 9.1E-16 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 SRM_RS09705 5ef1654334907362e37fd06d0ad65cd0 576 PANTHER PTHR36928 339 575 9.2E-45 T 22-04-2016 SRM_RS09705 5ef1654334907362e37fd06d0ad65cd0 576 Gene3D G3DSA:1.10.150.110 18 100 4.4E-15 T 22-04-2016 IPR027421 DNA polymerase family X lyase domain SRM_RS09705 5ef1654334907362e37fd06d0ad65cd0 576 SUPERFAMILY SSF81301 176 313 4.32E-8 T 22-04-2016 SRM_RS09705 5ef1654334907362e37fd06d0ad65cd0 576 Pfam PF14716 Helix-hairpin-helix domain 21 89 7.7E-19 T 22-04-2016 IPR010996 DNA polymerase beta-like, N-terminal domain SRM_RS09705 5ef1654334907362e37fd06d0ad65cd0 576 SUPERFAMILY SSF89550 339 562 4.05E-47 T 22-04-2016 IPR016195 Polymerase/histidinol phosphatase-like GO:0003824 SRM_RS09705 5ef1654334907362e37fd06d0ad65cd0 576 SUPERFAMILY SSF47802 17 96 2.62E-15 T 22-04-2016 IPR010996 DNA polymerase beta-like, N-terminal domain SRM_RS09705 5ef1654334907362e37fd06d0ad65cd0 576 SMART SM00481 337 420 3.1E-6 T 22-04-2016 IPR003141 Polymerase/histidinol phosphatase, N-terminal GO:0003677|GO:0003887|GO:0006260 SRM_RS09705 5ef1654334907362e37fd06d0ad65cd0 576 PIRSF PIRSF005047 19 575 3.8E-164 T 22-04-2016 IPR022311 Uncharacterised conserved protein UCP005047, YshC KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 SRM_RS09705 5ef1654334907362e37fd06d0ad65cd0 576 Gene3D G3DSA:3.20.20.140 339 563 6.0E-42 T 22-04-2016 SRM_RS09705 5ef1654334907362e37fd06d0ad65cd0 576 Pfam PF14520 Helix-hairpin-helix domain 110 162 4.7E-7 T 22-04-2016 SRM_RS08810 733b50c68bb0c948d09bfe2e30385367 281 SUPERFAMILY SSF53613 7 256 2.36E-28 T 22-04-2016 IPR029056 Ribokinase-like SRM_RS08810 733b50c68bb0c948d09bfe2e30385367 281 PANTHER PTHR20858 48 215 3.3E-14 T 22-04-2016 SRM_RS08810 733b50c68bb0c948d09bfe2e30385367 281 Pfam PF08543 Phosphomethylpyrimidine kinase 18 258 1.4E-29 T 22-04-2016 IPR013749 Pyridoxamine kinase/Phosphomethylpyrimidine kinase UniPathway: UPA00647 SRM_RS08810 733b50c68bb0c948d09bfe2e30385367 281 Gene3D G3DSA:3.40.1190.20 18 254 6.0E-33 T 22-04-2016 IPR029056 Ribokinase-like SRM_RS09600 9de9ec5e3135fa7fbec8109d7bcbf919 455 PANTHER PTHR13887:SF14 287 447 2.8E-23 T 22-04-2016 SRM_RS09600 9de9ec5e3135fa7fbec8109d7bcbf919 455 SUPERFAMILY SSF52833 286 432 3.07E-31 T 22-04-2016 IPR012336 Thioredoxin-like fold SRM_RS09600 9de9ec5e3135fa7fbec8109d7bcbf919 455 SMART SM00756 59 202 0.0028 T 22-04-2016 IPR012932 Vitamin K epoxide reductase SRM_RS09600 9de9ec5e3135fa7fbec8109d7bcbf919 455 Gene3D G3DSA:3.40.30.10 285 432 6.8E-36 T 22-04-2016 IPR012336 Thioredoxin-like fold SRM_RS09600 9de9ec5e3135fa7fbec8109d7bcbf919 455 Pfam PF07884 Vitamin K epoxide reductase family 64 196 2.1E-17 T 22-04-2016 IPR012932 Vitamin K epoxide reductase SRM_RS09600 9de9ec5e3135fa7fbec8109d7bcbf919 455 ProSitePatterns PS00194 Thioredoxin family active site. 298 316 - T 22-04-2016 IPR017937 Thioredoxin, conserved site GO:0045454 SRM_RS09600 9de9ec5e3135fa7fbec8109d7bcbf919 455 Pfam PF13462 Thioredoxin 286 442 9.7E-27 T 22-04-2016 IPR012336 Thioredoxin-like fold SRM_RS09600 9de9ec5e3135fa7fbec8109d7bcbf919 455 PANTHER PTHR13887 287 447 2.8E-23 T 22-04-2016 SRM_RS12855 32fd67f4b2cb705471dffecbba543922 237 PANTHER PTHR23026 209 228 3.1E-20 T 22-04-2016 SRM_RS12855 32fd67f4b2cb705471dffecbba543922 237 PANTHER PTHR23026 39 192 3.1E-20 T 22-04-2016 SRM_RS12855 32fd67f4b2cb705471dffecbba543922 237 SUPERFAMILY SSF55469 36 226 1.44E-43 T 22-04-2016 IPR000415 Nitroreductase-like GO:0016491 SRM_RS12855 32fd67f4b2cb705471dffecbba543922 237 Gene3D G3DSA:3.40.109.10 34 226 5.4E-46 T 22-04-2016 IPR000415 Nitroreductase-like GO:0016491 SRM_RS12855 32fd67f4b2cb705471dffecbba543922 237 Pfam PF00881 Nitroreductase family 46 191 3.0E-16 T 22-04-2016 IPR029479 Nitroreductase SRM_RS04865 a1ff2775d97682057d915eb7db60cf17 87 TIGRFAM TIGR03188 histidine_hisI: phosphoribosyl-ATP diphosphatase 5 87 2.9E-22 T 22-04-2016 IPR008179 Phosphoribosyl-ATP pyrophosphohydrolase GO:0000105|GO:0004636 KEGG: 00340+3.6.1.31|UniPathway: UPA00031 SRM_RS04865 a1ff2775d97682057d915eb7db60cf17 87 Hamap MF_01020 Phosphoribosyl-ATP pyrophosphatase [hisE]. 1 87 16.756 T 22-04-2016 IPR008179 Phosphoribosyl-ATP pyrophosphohydrolase GO:0000105|GO:0004636 KEGG: 00340+3.6.1.31|UniPathway: UPA00031 SRM_RS04865 a1ff2775d97682057d915eb7db60cf17 87 Pfam PF01503 Phosphoribosyl-ATP pyrophosphohydrolase 11 86 1.0E-6 T 22-04-2016 IPR021130 Phosphoribosyl-ATP pyrophosphohydrolase-like KEGG: 00340+3.6.1.31|UniPathway: UPA00031 SRM_RS04865 a1ff2775d97682057d915eb7db60cf17 87 PANTHER PTHR21256 4 87 4.9E-21 T 22-04-2016 SRM_RS04865 a1ff2775d97682057d915eb7db60cf17 87 SUPERFAMILY SSF101386 2 87 7.66E-22 T 22-04-2016 SRM_RS03180 38e4aefc09ae906a2dcc137b0842403a 413 SUPERFAMILY SSF53187 315 386 2.54E-40 T 22-04-2016 SRM_RS03180 38e4aefc09ae906a2dcc137b0842403a 413 SUPERFAMILY SSF53187 13 205 2.54E-40 T 22-04-2016 SRM_RS03180 38e4aefc09ae906a2dcc137b0842403a 413 Gene3D G3DSA:3.30.70.360 206 296 3.4E-24 T 22-04-2016 IPR011650 Peptidase M20, dimerisation domain SRM_RS03180 38e4aefc09ae906a2dcc137b0842403a 413 Pfam PF01546 Peptidase family M20/M25/M40 90 385 2.8E-18 T 22-04-2016 IPR002933 Peptidase M20 GO:0008152|GO:0016787 SRM_RS03180 38e4aefc09ae906a2dcc137b0842403a 413 SUPERFAMILY SSF55031 196 306 1.31E-20 T 22-04-2016 IPR011650 Peptidase M20, dimerisation domain SRM_RS03180 38e4aefc09ae906a2dcc137b0842403a 413 PANTHER PTHR11014:SF64 5 393 3.1E-75 T 22-04-2016 SRM_RS03180 38e4aefc09ae906a2dcc137b0842403a 413 PANTHER PTHR11014 5 393 3.1E-75 T 22-04-2016 SRM_RS03180 38e4aefc09ae906a2dcc137b0842403a 413 PIRSF PIRSF037238 11 388 8.6E-109 T 22-04-2016 IPR017150 Peptidase M20, glutamate carboxypeptidase SRM_RS03180 38e4aefc09ae906a2dcc137b0842403a 413 Pfam PF07687 Peptidase dimerisation domain 193 285 5.8E-19 T 22-04-2016 IPR011650 Peptidase M20, dimerisation domain SRM_RS03180 38e4aefc09ae906a2dcc137b0842403a 413 Gene3D G3DSA:3.40.630.10 331 386 2.0E-39 T 22-04-2016 SRM_RS03180 38e4aefc09ae906a2dcc137b0842403a 413 Gene3D G3DSA:3.40.630.10 20 205 2.0E-39 T 22-04-2016 SRM_RS03655 43d87865e69b80a4599f0bc54fc00e74 215 Pfam PF01243 Pyridoxamine 5'-phosphate oxidase 34 119 2.8E-27 T 22-04-2016 IPR011576 Pyridoxamine 5'-phosphate oxidase-like, FMN-binding domain GO:0004733|GO:0010181|GO:0055114 KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|UniPathway: UPA00647 SRM_RS03655 43d87865e69b80a4599f0bc54fc00e74 215 PIRSF PIRSF000190 1 215 7.8E-88 T 22-04-2016 IPR000659 Pyridoxamine 5'-phosphate oxidase GO:0004733|GO:0008615|GO:0055114 KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|UniPathway: UPA00647 SRM_RS03655 43d87865e69b80a4599f0bc54fc00e74 215 PANTHER PTHR10851:SF0 1 215 3.7E-117 T 22-04-2016 IPR000659 Pyridoxamine 5'-phosphate oxidase GO:0004733|GO:0008615|GO:0055114 KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|UniPathway: UPA00647 SRM_RS03655 43d87865e69b80a4599f0bc54fc00e74 215 Gene3D G3DSA:2.30.110.10 16 215 1.6E-89 T 22-04-2016 IPR012349 FMN-binding split barrel GO:0010181|GO:0016491|GO:0055114 UniPathway: UPA00647 SRM_RS03655 43d87865e69b80a4599f0bc54fc00e74 215 TIGRFAM TIGR00558 pdxH: pyridoxamine 5'-phosphate oxidase 3 215 8.8E-89 T 22-04-2016 IPR000659 Pyridoxamine 5'-phosphate oxidase GO:0004733|GO:0008615|GO:0055114 KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|UniPathway: UPA00647 SRM_RS03655 43d87865e69b80a4599f0bc54fc00e74 215 Pfam PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region 173 215 1.6E-21 T 22-04-2016 IPR019576 Pyridoxine 5'-phosphate oxidase, dimerisation, C-terminal GO:0016638|GO:0055114 KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|UniPathway: UPA00647 SRM_RS03655 43d87865e69b80a4599f0bc54fc00e74 215 Hamap MF_01629 Pyridoxine/pyridoxamine 5'-phosphate oxidase [pdxH]. 10 215 41.081 T 22-04-2016 IPR000659 Pyridoxamine 5'-phosphate oxidase GO:0004733|GO:0008615|GO:0055114 KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|UniPathway: UPA00647 SRM_RS03655 43d87865e69b80a4599f0bc54fc00e74 215 PANTHER PTHR10851 1 215 3.7E-117 T 22-04-2016 SRM_RS03655 43d87865e69b80a4599f0bc54fc00e74 215 SUPERFAMILY SSF50475 14 215 1.22E-71 T 22-04-2016 IPR012349 FMN-binding split barrel GO:0010181|GO:0016491|GO:0055114 UniPathway: UPA00647 SRM_RS03655 43d87865e69b80a4599f0bc54fc00e74 215 ProSitePatterns PS01064 Pyridoxamine 5'-phosphate oxidase signature. 183 196 - T 22-04-2016 IPR019740 Pyridoxamine 5'-phosphate oxidase, conserved site GO:0016638|GO:0055114 KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|UniPathway: UPA00647 SRM_RS14470 656694719e4eb65068853e21514edbee 123 Gene3D G3DSA:3.40.50.2300 1 120 1.8E-39 T 22-04-2016 SRM_RS14470 656694719e4eb65068853e21514edbee 123 SUPERFAMILY SSF52172 1 120 2.13E-38 T 22-04-2016 IPR011006 CheY-like superfamily SRM_RS14470 656694719e4eb65068853e21514edbee 123 Pfam PF00072 Response regulator receiver domain 4 115 9.3E-34 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SRM_RS14470 656694719e4eb65068853e21514edbee 123 PANTHER PTHR26402 1 120 6.3E-43 T 22-04-2016 SRM_RS14470 656694719e4eb65068853e21514edbee 123 SMART SM00448 1 115 5.6E-39 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SRM_RS03570 fc2f50e7e2d115bc2e2e7f68d7561578 277 ProSitePatterns PS00630 Inositol monophosphatase family signature 2. 221 235 - T 22-04-2016 IPR020550 Inositol monophosphatase, conserved site GO:0046854 SRM_RS03570 fc2f50e7e2d115bc2e2e7f68d7561578 277 Pfam PF00459 Inositol monophosphatase family 13 260 3.7E-59 T 22-04-2016 IPR000760 Inositol monophosphatase GO:0046854 SRM_RS03570 fc2f50e7e2d115bc2e2e7f68d7561578 277 Gene3D G3DSA:3.30.540.10 10 160 3.1E-48 T 22-04-2016 SRM_RS03570 fc2f50e7e2d115bc2e2e7f68d7561578 277 PRINTS PR01959 SuhB family inositol monophosphatase signature 166 192 2.9E-14 T 22-04-2016 IPR022337 Inositol monophosphatase, SuhB GO:0008934|GO:0046855 KEGG: 00521+3.1.3.25|KEGG: 00562+3.1.3.25|KEGG: 04070+3.1.3.25|MetaCyc: PWY-2301|MetaCyc: PWY-4702|MetaCyc: PWY-6363 SRM_RS03570 fc2f50e7e2d115bc2e2e7f68d7561578 277 PRINTS PR01959 SuhB family inositol monophosphatase signature 208 220 2.9E-14 T 22-04-2016 IPR022337 Inositol monophosphatase, SuhB GO:0008934|GO:0046855 KEGG: 00521+3.1.3.25|KEGG: 00562+3.1.3.25|KEGG: 04070+3.1.3.25|MetaCyc: PWY-2301|MetaCyc: PWY-4702|MetaCyc: PWY-6363 SRM_RS03570 fc2f50e7e2d115bc2e2e7f68d7561578 277 PRINTS PR01959 SuhB family inositol monophosphatase signature 114 133 2.9E-14 T 22-04-2016 IPR022337 Inositol monophosphatase, SuhB GO:0008934|GO:0046855 KEGG: 00521+3.1.3.25|KEGG: 00562+3.1.3.25|KEGG: 04070+3.1.3.25|MetaCyc: PWY-2301|MetaCyc: PWY-4702|MetaCyc: PWY-6363 SRM_RS03570 fc2f50e7e2d115bc2e2e7f68d7561578 277 PRINTS PR00377 Inositol monophosphatase superfamily signature 91 107 1.3E-42 T 22-04-2016 IPR000760 Inositol monophosphatase GO:0046854 SRM_RS03570 fc2f50e7e2d115bc2e2e7f68d7561578 277 PRINTS PR00377 Inositol monophosphatase superfamily signature 45 65 1.3E-42 T 22-04-2016 IPR000760 Inositol monophosphatase GO:0046854 SRM_RS03570 fc2f50e7e2d115bc2e2e7f68d7561578 277 PRINTS PR00377 Inositol monophosphatase superfamily signature 187 208 1.3E-42 T 22-04-2016 IPR000760 Inositol monophosphatase GO:0046854 SRM_RS03570 fc2f50e7e2d115bc2e2e7f68d7561578 277 PRINTS PR00377 Inositol monophosphatase superfamily signature 67 83 1.3E-42 T 22-04-2016 IPR000760 Inositol monophosphatase GO:0046854 SRM_RS03570 fc2f50e7e2d115bc2e2e7f68d7561578 277 PRINTS PR00377 Inositol monophosphatase superfamily signature 140 163 1.3E-42 T 22-04-2016 IPR000760 Inositol monophosphatase GO:0046854 SRM_RS03570 fc2f50e7e2d115bc2e2e7f68d7561578 277 PRINTS PR00377 Inositol monophosphatase superfamily signature 218 242 1.3E-42 T 22-04-2016 IPR000760 Inositol monophosphatase GO:0046854 SRM_RS03570 fc2f50e7e2d115bc2e2e7f68d7561578 277 Gene3D G3DSA:3.40.190.80 161 272 2.4E-32 T 22-04-2016 SRM_RS03570 fc2f50e7e2d115bc2e2e7f68d7561578 277 SUPERFAMILY SSF56655 13 270 1.24E-74 T 22-04-2016 SRM_RS03570 fc2f50e7e2d115bc2e2e7f68d7561578 277 ProSitePatterns PS00629 Inositol monophosphatase family signature 1. 91 104 - T 22-04-2016 IPR020583 Inositol monophosphatase, metal-binding site SRM_RS03570 fc2f50e7e2d115bc2e2e7f68d7561578 277 PANTHER PTHR20854:SF4 5 240 1.7E-82 T 22-04-2016 SRM_RS03570 fc2f50e7e2d115bc2e2e7f68d7561578 277 PANTHER PTHR20854 5 240 1.7E-82 T 22-04-2016 IPR000760 Inositol monophosphatase GO:0046854 SRM_RS08260 8129739f15cb4a744ba591a875db8f18 317 PANTHER PTHR10846 22 315 9.8E-36 T 22-04-2016 IPR004481 Sodium/potassium/calcium exchanger Reactome: REACT_15518 SRM_RS08260 8129739f15cb4a744ba591a875db8f18 317 TIGRFAM TIGR00367 TIGR00367: K+-dependent Na+/Ca+ exchanger homolog 2 310 1.9E-66 T 22-04-2016 IPR004481 Sodium/potassium/calcium exchanger Reactome: REACT_15518 SRM_RS08260 8129739f15cb4a744ba591a875db8f18 317 Pfam PF01699 Sodium/calcium exchanger protein 176 316 1.3E-27 T 22-04-2016 IPR004837 Sodium/calcium exchanger membrane region GO:0016021|GO:0055085 Reactome: REACT_15518 SRM_RS08260 8129739f15cb4a744ba591a875db8f18 317 Pfam PF01699 Sodium/calcium exchanger protein 4 135 1.6E-23 T 22-04-2016 IPR004837 Sodium/calcium exchanger membrane region GO:0016021|GO:0055085 Reactome: REACT_15518 SRM_RS01360 66a1998224d460c6ebf71f440787a6f7 428 Pfam PF00188 Cysteine-rich secretory protein family 203 324 6.1E-15 T 22-04-2016 IPR014044 CAP domain SRM_RS01360 66a1998224d460c6ebf71f440787a6f7 428 SUPERFAMILY SSF55797 197 332 2.88E-17 T 22-04-2016 IPR014044 CAP domain SRM_RS01360 66a1998224d460c6ebf71f440787a6f7 428 Gene3D G3DSA:3.40.33.10 196 332 2.3E-8 T 22-04-2016 IPR014044 CAP domain SRM_RS01360 66a1998224d460c6ebf71f440787a6f7 428 PANTHER PTHR31157:SF1 175 329 5.0E-24 T 22-04-2016 SRM_RS01360 66a1998224d460c6ebf71f440787a6f7 428 PANTHER PTHR31157 175 329 5.0E-24 T 22-04-2016 SRM_RS01245 bc51f3b68d5c44e60ddf6265da39ad24 1106 SUPERFAMILY SSF47384 861 943 3.73E-18 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SRM_RS01245 bc51f3b68d5c44e60ddf6265da39ad24 1106 Pfam PF08448 PAS fold 463 573 3.7E-10 T 22-04-2016 IPR013656 PAS fold-4 SRM_RS01245 bc51f3b68d5c44e60ddf6265da39ad24 1106 Pfam PF08448 PAS fold 199 310 2.3E-13 T 22-04-2016 IPR013656 PAS fold-4 SRM_RS01245 bc51f3b68d5c44e60ddf6265da39ad24 1106 SUPERFAMILY SSF55785 441 569 3.14E-19 T 22-04-2016 IPR000014 PAS domain SRM_RS01245 bc51f3b68d5c44e60ddf6265da39ad24 1106 Gene3D G3DSA:1.10.287.130 868 938 2.5E-15 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SRM_RS01245 bc51f3b68d5c44e60ddf6265da39ad24 1106 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 328 451 2.9E-7 T 22-04-2016 IPR000014 PAS domain SRM_RS01245 bc51f3b68d5c44e60ddf6265da39ad24 1106 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 192 315 4.9E-13 T 22-04-2016 IPR000014 PAS domain SRM_RS01245 bc51f3b68d5c44e60ddf6265da39ad24 1106 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 579 702 3.1E-20 T 22-04-2016 IPR000014 PAS domain SRM_RS01245 bc51f3b68d5c44e60ddf6265da39ad24 1106 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 452 578 1.0E-12 T 22-04-2016 IPR000014 PAS domain SRM_RS01245 bc51f3b68d5c44e60ddf6265da39ad24 1106 Gene3D G3DSA:3.30.565.10 944 1103 3.4E-44 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SRM_RS01245 bc51f3b68d5c44e60ddf6265da39ad24 1106 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 989 1098 7.8E-25 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SRM_RS01245 bc51f3b68d5c44e60ddf6265da39ad24 1106 Pfam PF00512 His Kinase A (phospho-acceptor) domain 875 941 5.5E-15 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SRM_RS01245 bc51f3b68d5c44e60ddf6265da39ad24 1106 Gene3D G3DSA:3.30.450.20 569 694 1.1E-24 T 22-04-2016 SRM_RS01245 bc51f3b68d5c44e60ddf6265da39ad24 1106 Gene3D G3DSA:3.30.450.20 456 568 6.3E-20 T 22-04-2016 SRM_RS01245 bc51f3b68d5c44e60ddf6265da39ad24 1106 SUPERFAMILY SSF55781 690 855 2.71E-12 T 22-04-2016 IPR029016 GAF domain-like SRM_RS01245 bc51f3b68d5c44e60ddf6265da39ad24 1106 SMART SM00065 41 188 0.0016 T 22-04-2016 IPR003018 GAF domain GO:0005515 SRM_RS01245 bc51f3b68d5c44e60ddf6265da39ad24 1106 SMART SM00065 705 863 0.4 T 22-04-2016 IPR003018 GAF domain GO:0005515 SRM_RS01245 bc51f3b68d5c44e60ddf6265da39ad24 1106 SUPERFAMILY SSF55785 179 306 9.25E-16 T 22-04-2016 IPR000014 PAS domain SRM_RS01245 bc51f3b68d5c44e60ddf6265da39ad24 1106 Gene3D G3DSA:3.30.450.20 191 308 5.7E-17 T 22-04-2016 SRM_RS01245 bc51f3b68d5c44e60ddf6265da39ad24 1106 SMART SM00086 267 308 0.88 T 22-04-2016 IPR001610 PAC motif SRM_RS01245 bc51f3b68d5c44e60ddf6265da39ad24 1106 SMART SM00086 402 444 0.0076 T 22-04-2016 IPR001610 PAC motif SRM_RS01245 bc51f3b68d5c44e60ddf6265da39ad24 1106 SMART SM00086 654 696 3.5E-8 T 22-04-2016 IPR001610 PAC motif SRM_RS01245 bc51f3b68d5c44e60ddf6265da39ad24 1106 SMART SM00086 531 571 23.0 T 22-04-2016 IPR001610 PAC motif SRM_RS01245 bc51f3b68d5c44e60ddf6265da39ad24 1106 PRINTS PR00344 Bacterial sensor protein C-terminal signature 1043 1053 1.7E-13 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SRM_RS01245 bc51f3b68d5c44e60ddf6265da39ad24 1106 PRINTS PR00344 Bacterial sensor protein C-terminal signature 1025 1039 1.7E-13 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SRM_RS01245 bc51f3b68d5c44e60ddf6265da39ad24 1106 PRINTS PR00344 Bacterial sensor protein C-terminal signature 1084 1097 1.7E-13 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SRM_RS01245 bc51f3b68d5c44e60ddf6265da39ad24 1106 PRINTS PR00344 Bacterial sensor protein C-terminal signature 1060 1078 1.7E-13 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SRM_RS01245 bc51f3b68d5c44e60ddf6265da39ad24 1106 SMART SM00388 875 942 6.9E-18 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SRM_RS01245 bc51f3b68d5c44e60ddf6265da39ad24 1106 Gene3D G3DSA:3.30.450.40 699 867 5.5E-13 T 22-04-2016 IPR029016 GAF domain-like SRM_RS01245 bc51f3b68d5c44e60ddf6265da39ad24 1106 Gene3D G3DSA:3.30.450.40 41 190 1.9E-10 T 22-04-2016 IPR029016 GAF domain-like SRM_RS01245 bc51f3b68d5c44e60ddf6265da39ad24 1106 SUPERFAMILY SSF55874 933 1102 1.96E-43 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SRM_RS01245 bc51f3b68d5c44e60ddf6265da39ad24 1106 SUPERFAMILY SSF55785 568 694 6.28E-24 T 22-04-2016 IPR000014 PAS domain SRM_RS01245 bc51f3b68d5c44e60ddf6265da39ad24 1106 SMART SM00387 988 1100 3.4E-37 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SRM_RS01245 bc51f3b68d5c44e60ddf6265da39ad24 1106 Gene3D G3DSA:3.30.450.20 332 455 3.4E-15 T 22-04-2016 SRM_RS01245 bc51f3b68d5c44e60ddf6265da39ad24 1106 Pfam PF13426 PAS domain 348 443 2.0E-5 T 22-04-2016 IPR000014 PAS domain SRM_RS01245 bc51f3b68d5c44e60ddf6265da39ad24 1106 Pfam PF13426 PAS domain 600 695 4.5E-11 T 22-04-2016 IPR000014 PAS domain SRM_RS01245 bc51f3b68d5c44e60ddf6265da39ad24 1106 SMART SM00091 456 524 4.8E-4 T 22-04-2016 IPR000014 PAS domain SRM_RS01245 bc51f3b68d5c44e60ddf6265da39ad24 1106 SMART SM00091 192 258 4.0E-7 T 22-04-2016 IPR000014 PAS domain SRM_RS01245 bc51f3b68d5c44e60ddf6265da39ad24 1106 SMART SM00091 331 399 0.0035 T 22-04-2016 IPR000014 PAS domain SRM_RS01245 bc51f3b68d5c44e60ddf6265da39ad24 1106 SMART SM00091 583 651 4.6E-4 T 22-04-2016 IPR000014 PAS domain SRM_RS01245 bc51f3b68d5c44e60ddf6265da39ad24 1106 SUPERFAMILY SSF55785 318 442 7.5E-14 T 22-04-2016 IPR000014 PAS domain SRM_RS01245 bc51f3b68d5c44e60ddf6265da39ad24 1106 PANTHER PTHR24423 656 713 3.4E-113 T 22-04-2016 SRM_RS01245 bc51f3b68d5c44e60ddf6265da39ad24 1106 PANTHER PTHR24423 303 530 3.4E-113 T 22-04-2016 SRM_RS01245 bc51f3b68d5c44e60ddf6265da39ad24 1106 PANTHER PTHR24423 873 1103 3.4E-113 T 22-04-2016 SRM_RS01245 bc51f3b68d5c44e60ddf6265da39ad24 1106 SUPERFAMILY SSF55781 41 189 2.28E-18 T 22-04-2016 IPR029016 GAF domain-like SRM_RS07805 4bfde8931e0e3f880edfb289da4c19c3 190 Gene3D G3DSA:3.40.30.10 1 188 4.0E-42 T 22-04-2016 IPR012336 Thioredoxin-like fold SRM_RS07805 4bfde8931e0e3f880edfb289da4c19c3 190 PANTHER PTHR10681:SF104 53 179 6.1E-23 T 22-04-2016 SRM_RS07805 4bfde8931e0e3f880edfb289da4c19c3 190 ProSitePatterns PS00194 Thioredoxin family active site. 79 97 - T 22-04-2016 IPR017937 Thioredoxin, conserved site GO:0045454 SRM_RS07805 4bfde8931e0e3f880edfb289da4c19c3 190 PANTHER PTHR10681 53 179 6.1E-23 T 22-04-2016 SRM_RS07805 4bfde8931e0e3f880edfb289da4c19c3 190 SUPERFAMILY SSF52833 1 186 1.09E-33 T 22-04-2016 IPR012336 Thioredoxin-like fold SRM_RS07805 4bfde8931e0e3f880edfb289da4c19c3 190 Pfam PF00578 AhpC/TSA family 54 167 9.4E-20 T 22-04-2016 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15 SRM_RS01340 c9f5c65db42e62205f72d74bffac5e48 2124 PANTHER PTHR23304 668 994 1.3E-19 T 22-04-2016 SRM_RS01340 c9f5c65db42e62205f72d74bffac5e48 2124 PANTHER PTHR23304 85 446 1.3E-19 T 22-04-2016 SRM_RS01340 c9f5c65db42e62205f72d74bffac5e48 2124 Gene3D G3DSA:2.130.10.130 1353 1581 8.7E-19 T 22-04-2016 SRM_RS01340 c9f5c65db42e62205f72d74bffac5e48 2124 Gene3D G3DSA:2.130.10.130 673 987 5.1E-30 T 22-04-2016 SRM_RS01340 c9f5c65db42e62205f72d74bffac5e48 2124 Gene3D G3DSA:2.130.10.130 53 232 1.1E-13 T 22-04-2016 SRM_RS01340 c9f5c65db42e62205f72d74bffac5e48 2124 Gene3D G3DSA:2.130.10.130 392 475 1.2E-8 T 22-04-2016 SRM_RS01340 c9f5c65db42e62205f72d74bffac5e48 2124 Gene3D G3DSA:2.130.10.130 233 391 9.6E-19 T 22-04-2016 SRM_RS01340 c9f5c65db42e62205f72d74bffac5e48 2124 SUPERFAMILY SSF69318 1249 1583 1.31E-41 T 22-04-2016 SRM_RS01340 c9f5c65db42e62205f72d74bffac5e48 2124 Gene3D G3DSA:2.60.40.10 476 565 3.1E-19 T 22-04-2016 IPR013783 Immunoglobulin-like fold SRM_RS01340 c9f5c65db42e62205f72d74bffac5e48 2124 Gene3D G3DSA:2.60.40.10 1050 1143 7.3E-19 T 22-04-2016 IPR013783 Immunoglobulin-like fold SRM_RS01340 c9f5c65db42e62205f72d74bffac5e48 2124 Gene3D G3DSA:2.60.40.10 1601 1688 1.3E-17 T 22-04-2016 IPR013783 Immunoglobulin-like fold SRM_RS01340 c9f5c65db42e62205f72d74bffac5e48 2124 SUPERFAMILY SSF49265 1590 1688 2.39E-12 T 22-04-2016 IPR003961 Fibronectin type III GO:0005515 SRM_RS01340 c9f5c65db42e62205f72d74bffac5e48 2124 SUPERFAMILY SSF49265 1060 1148 2.39E-12 T 22-04-2016 IPR003961 Fibronectin type III GO:0005515 SRM_RS01340 c9f5c65db42e62205f72d74bffac5e48 2124 SUPERFAMILY SSF69318 223 471 3.14E-31 T 22-04-2016 SRM_RS01340 c9f5c65db42e62205f72d74bffac5e48 2124 PANTHER PTHR23304:SF93 668 994 1.3E-19 T 22-04-2016 SRM_RS01340 c9f5c65db42e62205f72d74bffac5e48 2124 PANTHER PTHR23304:SF93 85 446 1.3E-19 T 22-04-2016 SRM_RS01340 c9f5c65db42e62205f72d74bffac5e48 2124 Gene3D G3DSA:2.60.40.10 11 52 2.8E-4 T 22-04-2016 IPR013783 Immunoglobulin-like fold SRM_RS01340 c9f5c65db42e62205f72d74bffac5e48 2124 SUPERFAMILY SSF49265 481 560 7.38E-8 T 22-04-2016 IPR003961 Fibronectin type III GO:0005515 SRM_RS01340 c9f5c65db42e62205f72d74bffac5e48 2124 Pfam PF13517 Repeat domain in Vibrio, Colwellia, Bradyrhizobium and Shewanella 227 290 3.7E-11 T 22-04-2016 SRM_RS01340 c9f5c65db42e62205f72d74bffac5e48 2124 Pfam PF13517 Repeat domain in Vibrio, Colwellia, Bradyrhizobium and Shewanella 745 811 7.5E-11 T 22-04-2016 SRM_RS01340 c9f5c65db42e62205f72d74bffac5e48 2124 Pfam PF13517 Repeat domain in Vibrio, Colwellia, Bradyrhizobium and Shewanella 853 916 1.3E-11 T 22-04-2016 SRM_RS01340 c9f5c65db42e62205f72d74bffac5e48 2124 Pfam PF13517 Repeat domain in Vibrio, Colwellia, Bradyrhizobium and Shewanella 1412 1473 7.8E-8 T 22-04-2016 SRM_RS01340 c9f5c65db42e62205f72d74bffac5e48 2124 Pfam PF13517 Repeat domain in Vibrio, Colwellia, Bradyrhizobium and Shewanella 118 184 4.4E-9 T 22-04-2016 SRM_RS01340 c9f5c65db42e62205f72d74bffac5e48 2124 Pfam PF13517 Repeat domain in Vibrio, Colwellia, Bradyrhizobium and Shewanella 332 394 1.8E-7 T 22-04-2016 SRM_RS01340 c9f5c65db42e62205f72d74bffac5e48 2124 Pfam PF13517 Repeat domain in Vibrio, Colwellia, Bradyrhizobium and Shewanella 1256 1319 2.0E-8 T 22-04-2016 SRM_RS01340 c9f5c65db42e62205f72d74bffac5e48 2124 SUPERFAMILY SSF69318 661 918 9.59E-36 T 22-04-2016 SRM_RS01340 c9f5c65db42e62205f72d74bffac5e48 2124 Gene3D G3DSA:2.60.40.10 1145 1230 3.1E-10 T 22-04-2016 IPR013783 Immunoglobulin-like fold SRM_RS01340 c9f5c65db42e62205f72d74bffac5e48 2124 Gene3D G3DSA:2.60.40.10 570 647 6.2E-11 T 22-04-2016 IPR013783 Immunoglobulin-like fold SRM_RS01340 c9f5c65db42e62205f72d74bffac5e48 2124 SMART SM00429 8 90 19.0 T 22-04-2016 IPR002909 IPT domain GO:0005515 SRM_RS01340 c9f5c65db42e62205f72d74bffac5e48 2124 SMART SM00429 1146 1228 2.8 T 22-04-2016 IPR002909 IPT domain GO:0005515 SRM_RS01340 c9f5c65db42e62205f72d74bffac5e48 2124 SMART SM00429 570 655 0.25 T 22-04-2016 IPR002909 IPT domain GO:0005515 SRM_RS01340 c9f5c65db42e62205f72d74bffac5e48 2124 SMART SM00060 467 555 2.3 T 22-04-2016 IPR003961 Fibronectin type III GO:0005515 SRM_RS01340 c9f5c65db42e62205f72d74bffac5e48 2124 SMART SM00060 1599 1684 0.009 T 22-04-2016 IPR003961 Fibronectin type III GO:0005515 SRM_RS01340 c9f5c65db42e62205f72d74bffac5e48 2124 SMART SM00060 1045 1133 0.12 T 22-04-2016 IPR003961 Fibronectin type III GO:0005515 SRM_RS01340 c9f5c65db42e62205f72d74bffac5e48 2124 Pfam PF01833 IPT/TIG domain 572 643 1.7E-9 T 22-04-2016 IPR002909 IPT domain GO:0005515 SRM_RS01340 c9f5c65db42e62205f72d74bffac5e48 2124 Pfam PF01833 IPT/TIG domain 10 87 3.0E-11 T 22-04-2016 IPR002909 IPT domain GO:0005515 SRM_RS01340 c9f5c65db42e62205f72d74bffac5e48 2124 Pfam PF01833 IPT/TIG domain 1148 1226 1.4E-8 T 22-04-2016 IPR002909 IPT domain GO:0005515 SRM_RS01340 c9f5c65db42e62205f72d74bffac5e48 2124 SUPERFAMILY SSF81296 1150 1226 2.18E-10 T 22-04-2016 IPR014756 Immunoglobulin E-set SRM_RS01340 c9f5c65db42e62205f72d74bffac5e48 2124 TIGRFAM TIGR04183 Por_Secre_tail: Por secretion system C-terminal sorting domain 2046 2122 7.4E-11 T 22-04-2016 IPR026444 Secretion system C-terminal sorting domain SRM_RS01340 c9f5c65db42e62205f72d74bffac5e48 2124 SUPERFAMILY SSF69318 73 296 6.8E-30 T 22-04-2016 SRM_RS01340 c9f5c65db42e62205f72d74bffac5e48 2124 SUPERFAMILY SSF81296 10 87 2.33E-13 T 22-04-2016 IPR014756 Immunoglobulin E-set SRM_RS01340 c9f5c65db42e62205f72d74bffac5e48 2124 SUPERFAMILY SSF69318 873 1049 1.15E-18 T 22-04-2016 SRM_RS01340 c9f5c65db42e62205f72d74bffac5e48 2124 SUPERFAMILY SSF81296 572 649 2.02E-10 T 22-04-2016 IPR014756 Immunoglobulin E-set SRM_RS07725 c193b4ca02d41c6ccbf898a7faeb340a 345 Pfam PF01112 Asparaginase 39 341 1.4E-74 T 22-04-2016 IPR000246 Peptidase T2, asparaginase 2 GO:0016787 SRM_RS07725 c193b4ca02d41c6ccbf898a7faeb340a 345 PANTHER PTHR10188 38 335 1.6E-86 T 22-04-2016 IPR000246 Peptidase T2, asparaginase 2 GO:0016787 SRM_RS07725 c193b4ca02d41c6ccbf898a7faeb340a 345 SUPERFAMILY SSF56235 38 341 1.88E-66 T 22-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal SRM_RS07725 c193b4ca02d41c6ccbf898a7faeb340a 345 PANTHER PTHR10188:SF17 38 335 1.6E-86 T 22-04-2016 SRM_RS04450 a8834582b63158700abd8ef152bb40fb 304 Gene3D G3DSA:1.25.40.10 199 284 1.3E-9 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 SRM_RS04450 a8834582b63158700abd8ef152bb40fb 304 SMART SM00028 133 167 150.0 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 SRM_RS04450 a8834582b63158700abd8ef152bb40fb 304 SMART SM00028 220 253 0.32 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 SRM_RS04450 a8834582b63158700abd8ef152bb40fb 304 SMART SM00028 99 132 78.0 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 SRM_RS04450 a8834582b63158700abd8ef152bb40fb 304 SUPERFAMILY SSF48452 105 284 5.57E-11 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 SRM_RS04450 a8834582b63158700abd8ef152bb40fb 304 Pfam PF13432 Tetratricopeptide repeat 226 282 0.0036 T 22-04-2016 SRM_RS04450 a8834582b63158700abd8ef152bb40fb 304 Gene3D G3DSA:1.25.40.10 55 163 1.1E-7 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 SRM_RS01965 7ce40bdd89f26b6996459442cea95a0a 681 PIRSF PIRSF001589 1 680 7.9E-81 T 22-04-2016 SRM_RS01965 7ce40bdd89f26b6996459442cea95a0a 681 TIGRFAM TIGR01536 asn_synth_AEB: asparagine synthase (glutamine-hydrolyzing) 3 607 7.9E-82 T 22-04-2016 IPR006426 Asparagine synthase, glutamine-hydrolyzing GO:0004066|GO:0006529 KEGG: 00250+6.3.5.4|UniPathway: UPA00134 SRM_RS01965 7ce40bdd89f26b6996459442cea95a0a 681 Gene3D G3DSA:3.60.20.10 1 221 1.2E-49 T 22-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal SRM_RS01965 7ce40bdd89f26b6996459442cea95a0a 681 SUPERFAMILY SSF52402 218 384 4.19E-39 T 22-04-2016 SRM_RS01965 7ce40bdd89f26b6996459442cea95a0a 681 SUPERFAMILY SSF52402 524 631 4.19E-39 T 22-04-2016 SRM_RS01965 7ce40bdd89f26b6996459442cea95a0a 681 SUPERFAMILY SSF56235 1 223 9.12E-42 T 22-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal SRM_RS01965 7ce40bdd89f26b6996459442cea95a0a 681 Pfam PF00733 Asparagine synthase 241 672 1.1E-46 T 22-04-2016 IPR001962 Asparagine synthase GO:0004066|GO:0006529 SRM_RS01965 7ce40bdd89f26b6996459442cea95a0a 681 Pfam PF13537 Glutamine amidotransferase domain 64 166 1.6E-21 T 22-04-2016 IPR017932 Glutamine amidotransferase type 2 domain SRM_RS01965 7ce40bdd89f26b6996459442cea95a0a 681 Gene3D G3DSA:3.40.50.620 524 672 1.6E-59 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold SRM_RS01965 7ce40bdd89f26b6996459442cea95a0a 681 Gene3D G3DSA:3.40.50.620 222 384 1.6E-59 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold SRM_RS01965 7ce40bdd89f26b6996459442cea95a0a 681 PANTHER PTHR11772:SF10 3 389 2.4E-63 T 22-04-2016 SRM_RS01965 7ce40bdd89f26b6996459442cea95a0a 681 PANTHER PTHR11772:SF10 519 603 2.4E-63 T 22-04-2016 SRM_RS01965 7ce40bdd89f26b6996459442cea95a0a 681 PANTHER PTHR11772 3 389 2.4E-63 T 22-04-2016 SRM_RS01965 7ce40bdd89f26b6996459442cea95a0a 681 PANTHER PTHR11772 519 603 2.4E-63 T 22-04-2016 SRM_RS00865 526a37da9a0a7cbb61ba57bffc9f8ee0 287 SMART SM00987 128 274 5.2E-38 T 22-04-2016 SRM_RS00865 526a37da9a0a7cbb61ba57bffc9f8ee0 287 TIGRFAM TIGR00758 UDG_fam4: uracil-DNA glycosylase, family 4 120 277 6.2E-54 T 22-04-2016 IPR005273 Uracil-DNA glycosylase, family 4 domain SRM_RS00865 526a37da9a0a7cbb61ba57bffc9f8ee0 287 SUPERFAMILY SSF52141 101 281 6.21E-57 T 22-04-2016 IPR005122 Uracil-DNA glycosylase-like SRM_RS00865 526a37da9a0a7cbb61ba57bffc9f8ee0 287 PANTHER PTHR33693 100 287 5.2E-63 T 22-04-2016 SRM_RS00865 526a37da9a0a7cbb61ba57bffc9f8ee0 287 Gene3D G3DSA:3.40.470.10 104 283 1.4E-61 T 22-04-2016 IPR005122 Uracil-DNA glycosylase-like SRM_RS00865 526a37da9a0a7cbb61ba57bffc9f8ee0 287 PANTHER PTHR33693:SF1 100 287 5.2E-63 T 22-04-2016 SRM_RS00865 526a37da9a0a7cbb61ba57bffc9f8ee0 287 SMART SM00986 128 274 5.2E-38 T 22-04-2016 IPR005122 Uracil-DNA glycosylase-like SRM_RS00865 526a37da9a0a7cbb61ba57bffc9f8ee0 287 Pfam PF03167 Uracil DNA glycosylase superfamily 128 274 4.5E-44 T 22-04-2016 IPR005122 Uracil-DNA glycosylase-like SRM_RS11185 09a61bada9fdc6aa4c5cd2c934bd9c42 241 SUPERFAMILY SSF53254 27 233 1.31E-31 T 22-04-2016 IPR029033 Histidine phosphatase superfamily SRM_RS11185 09a61bada9fdc6aa4c5cd2c934bd9c42 241 SMART SM00855 29 190 2.1E-8 T 22-04-2016 IPR013078 Histidine phosphatase superfamily, clade-1 SRM_RS11185 09a61bada9fdc6aa4c5cd2c934bd9c42 241 Pfam PF00300 Histidine phosphatase superfamily (branch 1) 30 227 1.1E-29 T 22-04-2016 IPR013078 Histidine phosphatase superfamily, clade-1 SRM_RS11185 09a61bada9fdc6aa4c5cd2c934bd9c42 241 Gene3D G3DSA:3.40.50.1240 140 233 4.2E-28 T 22-04-2016 IPR029033 Histidine phosphatase superfamily SRM_RS11185 09a61bada9fdc6aa4c5cd2c934bd9c42 241 Gene3D G3DSA:3.40.50.1240 28 108 4.2E-28 T 22-04-2016 IPR029033 Histidine phosphatase superfamily SRM_RS11185 09a61bada9fdc6aa4c5cd2c934bd9c42 241 PANTHER PTHR16469 27 219 9.9E-26 T 22-04-2016 SRM_RS13390 6e652385fd1833624c3f6ad6c50e91a5 185 SMART SM00387 62 175 3.5E-33 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SRM_RS13390 6e652385fd1833624c3f6ad6c50e91a5 185 Gene3D G3DSA:3.30.565.10 17 176 4.1E-40 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SRM_RS13390 6e652385fd1833624c3f6ad6c50e91a5 185 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 64 174 1.8E-22 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SRM_RS13390 6e652385fd1833624c3f6ad6c50e91a5 185 PRINTS PR00344 Bacterial sensor protein C-terminal signature 135 153 1.7E-15 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SRM_RS13390 6e652385fd1833624c3f6ad6c50e91a5 185 PRINTS PR00344 Bacterial sensor protein C-terminal signature 100 114 1.7E-15 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SRM_RS13390 6e652385fd1833624c3f6ad6c50e91a5 185 PRINTS PR00344 Bacterial sensor protein C-terminal signature 159 172 1.7E-15 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SRM_RS13390 6e652385fd1833624c3f6ad6c50e91a5 185 PRINTS PR00344 Bacterial sensor protein C-terminal signature 118 128 1.7E-15 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SRM_RS13390 6e652385fd1833624c3f6ad6c50e91a5 185 PANTHER PTHR24423 1 180 1.2E-52 T 22-04-2016 SRM_RS13390 6e652385fd1833624c3f6ad6c50e91a5 185 SUPERFAMILY SSF55874 6 173 1.7E-41 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SRM_RS07500 f5f698320ea8378e334b60bb9b8fe081 376 Gene3D G3DSA:3.40.1160.10 6 264 5.4E-51 T 22-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 SRM_RS07500 f5f698320ea8378e334b60bb9b8fe081 376 PIRSF PIRSF000729 6 376 1.2E-116 T 22-04-2016 IPR011529 Glutamate 5-kinase GO:0004349|GO:0005737|GO:0006561 KEGG: 00330+2.7.2.11|KEGG: 00332+2.7.2.11|MetaCyc: PWY-3341|MetaCyc: PWY-6922|UniPathway: UPA00098 SRM_RS07500 f5f698320ea8378e334b60bb9b8fe081 376 PRINTS PR00474 Glutamate 5-kinase family signature 120 141 6.4E-39 T 22-04-2016 IPR001057 Glutamate/acetylglutamate kinase GO:0006561 SRM_RS07500 f5f698320ea8378e334b60bb9b8fe081 376 PRINTS PR00474 Glutamate 5-kinase family signature 152 179 6.4E-39 T 22-04-2016 IPR001057 Glutamate/acetylglutamate kinase GO:0006561 SRM_RS07500 f5f698320ea8378e334b60bb9b8fe081 376 PRINTS PR00474 Glutamate 5-kinase family signature 213 233 6.4E-39 T 22-04-2016 IPR001057 Glutamate/acetylglutamate kinase GO:0006561 SRM_RS07500 f5f698320ea8378e334b60bb9b8fe081 376 PRINTS PR00474 Glutamate 5-kinase family signature 47 61 6.4E-39 T 22-04-2016 IPR001057 Glutamate/acetylglutamate kinase GO:0006561 SRM_RS07500 f5f698320ea8378e334b60bb9b8fe081 376 Pfam PF00696 Amino acid kinase family 11 239 9.5E-41 T 22-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 SRM_RS07500 f5f698320ea8378e334b60bb9b8fe081 376 Gene3D G3DSA:2.30.130.10 279 373 9.1E-24 T 22-04-2016 IPR015947 PUA-like domain SRM_RS07500 f5f698320ea8378e334b60bb9b8fe081 376 TIGRFAM TIGR01027 proB: glutamate 5-kinase 11 373 1.1E-114 T 22-04-2016 IPR005715 Glutamate 5-kinase/delta-1-pyrroline-5-carboxylate synthase GO:0005737|GO:0006561 KEGG: 00330+2.7.2.11|KEGG: 00332+2.7.2.11|MetaCyc: PWY-3341|MetaCyc: PWY-6922|UniPathway: UPA00098 SRM_RS07500 f5f698320ea8378e334b60bb9b8fe081 376 SUPERFAMILY SSF53633 10 259 2.75E-59 T 22-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 SRM_RS07500 f5f698320ea8378e334b60bb9b8fe081 376 Pfam PF01472 PUA domain 281 358 8.8E-19 T 22-04-2016 IPR002478 PUA domain GO:0003723 SRM_RS07500 f5f698320ea8378e334b60bb9b8fe081 376 SMART SM00359 281 367 3.4E-11 T 22-04-2016 IPR002478 PUA domain GO:0003723 SRM_RS07500 f5f698320ea8378e334b60bb9b8fe081 376 SUPERFAMILY SSF88697 281 374 5.66E-20 T 22-04-2016 IPR015947 PUA-like domain SRM_RS07500 f5f698320ea8378e334b60bb9b8fe081 376 Hamap MF_00456 Glutamate 5-kinase [proB]. 10 262 32.037 T 22-04-2016 IPR005715 Glutamate 5-kinase/delta-1-pyrroline-5-carboxylate synthase GO:0005737|GO:0006561 KEGG: 00330+2.7.2.11|KEGG: 00332+2.7.2.11|MetaCyc: PWY-3341|MetaCyc: PWY-6922|UniPathway: UPA00098 SRM_RS07500 f5f698320ea8378e334b60bb9b8fe081 376 PANTHER PTHR11063 8 376 8.9E-101 T 22-04-2016 SRM_RS07500 f5f698320ea8378e334b60bb9b8fe081 376 PANTHER PTHR11063:SF6 8 376 8.9E-101 T 22-04-2016 SRM_RS01020 09d7e381e9c31b3511422b7ea2b06958 461 Gene3D G3DSA:1.20.120.430 402 461 5.5E-54 T 22-04-2016 IPR027368 tRNA modification GTPase MnmE domain 2 SRM_RS01020 09d7e381e9c31b3511422b7ea2b06958 461 Gene3D G3DSA:1.20.120.430 125 185 5.5E-54 T 22-04-2016 IPR027368 tRNA modification GTPase MnmE domain 2 SRM_RS01020 09d7e381e9c31b3511422b7ea2b06958 461 Gene3D G3DSA:1.20.120.430 249 274 5.5E-54 T 22-04-2016 IPR027368 tRNA modification GTPase MnmE domain 2 SRM_RS01020 09d7e381e9c31b3511422b7ea2b06958 461 Gene3D G3DSA:3.30.1360.120 1 124 2.4E-41 T 22-04-2016 IPR027266 GTP-binding protein TrmE/Glycine cleavage system T protein, domain 1 GO:0005515 SRM_RS01020 09d7e381e9c31b3511422b7ea2b06958 461 Pfam PF01926 50S ribosome-binding GTPase 221 320 7.3E-23 T 22-04-2016 IPR006073 GTP binding domain GO:0005525 SRM_RS01020 09d7e381e9c31b3511422b7ea2b06958 461 Hamap MF_00379 tRNA modification GTPase MnmE [mnmE]. 5 461 31.985 T 22-04-2016 IPR004520 tRNA modification GTPase MnmE GO:0003924|GO:0005525|GO:0005622|GO:0006400 SRM_RS01020 09d7e381e9c31b3511422b7ea2b06958 461 Gene3D G3DSA:3.40.50.300 383 401 2.0E-4 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SRM_RS01020 09d7e381e9c31b3511422b7ea2b06958 461 Gene3D G3DSA:3.40.50.300 289 351 2.0E-4 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SRM_RS01020 09d7e381e9c31b3511422b7ea2b06958 461 Gene3D G3DSA:3.40.50.300 208 248 5.5E-9 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SRM_RS01020 09d7e381e9c31b3511422b7ea2b06958 461 PANTHER PTHR11649:SF56 8 461 1.3E-130 T 22-04-2016 SRM_RS01020 09d7e381e9c31b3511422b7ea2b06958 461 Pfam PF12631 MnmE helical domain 126 458 3.4E-55 T 22-04-2016 IPR025867 MnmE, helical domain SRM_RS01020 09d7e381e9c31b3511422b7ea2b06958 461 TIGRFAM TIGR00450 mnmE_trmE_thdF: tRNA modification GTPase TrmE 11 461 1.0E-114 T 22-04-2016 IPR004520 tRNA modification GTPase MnmE GO:0003924|GO:0005525|GO:0005622|GO:0006400 SRM_RS01020 09d7e381e9c31b3511422b7ea2b06958 461 Pfam PF10396 GTP-binding protein TrmE N-terminus 6 123 8.9E-36 T 22-04-2016 IPR018948 GTP-binding protein TrmE, N-terminal SRM_RS01020 09d7e381e9c31b3511422b7ea2b06958 461 PANTHER PTHR11649 8 461 1.3E-130 T 22-04-2016 SRM_RS01020 09d7e381e9c31b3511422b7ea2b06958 461 SUPERFAMILY SSF116878 124 223 1.29E-47 T 22-04-2016 SRM_RS01020 09d7e381e9c31b3511422b7ea2b06958 461 SUPERFAMILY SSF116878 386 461 1.29E-47 T 22-04-2016 SRM_RS01020 09d7e381e9c31b3511422b7ea2b06958 461 SUPERFAMILY SSF52540 76 155 1.43E-39 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SRM_RS01020 09d7e381e9c31b3511422b7ea2b06958 461 SUPERFAMILY SSF52540 191 350 1.43E-39 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SRM_RS01020 09d7e381e9c31b3511422b7ea2b06958 461 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 220 343 4.6E-21 T 22-04-2016 IPR005225 Small GTP-binding protein domain GO:0005525 SRM_RS08295 eac7f4785f67956924e04f29c7907b7c 764 SUPERFAMILY SSF52540 516 747 1.42E-52 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SRM_RS08295 eac7f4785f67956924e04f29c7907b7c 764 PANTHER PTHR24221:SF138 158 738 1.9E-71 T 22-04-2016 SRM_RS08295 eac7f4785f67956924e04f29c7907b7c 764 Pfam PF00005 ABC transporter 534 682 5.5E-26 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 SRM_RS08295 eac7f4785f67956924e04f29c7907b7c 764 Gene3D G3DSA:1.20.1560.10 192 502 7.1E-26 T 22-04-2016 SRM_RS08295 eac7f4785f67956924e04f29c7907b7c 764 Gene3D G3DSA:3.40.50.300 518 739 1.7E-52 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SRM_RS08295 eac7f4785f67956924e04f29c7907b7c 764 SUPERFAMILY SSF90123 192 502 7.06E-31 T 22-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 SRM_RS08295 eac7f4785f67956924e04f29c7907b7c 764 PANTHER PTHR24221 158 738 1.9E-71 T 22-04-2016 SRM_RS08295 eac7f4785f67956924e04f29c7907b7c 764 SMART SM00382 543 728 4.3E-12 T 22-04-2016 IPR003593 AAA+ ATPase domain SRM_RS02435 89893b526da7f4a3c970239fbfd28683 140 Gene3D G3DSA:2.10.109.10 25 139 1.5E-42 T 22-04-2016 IPR028360 Peptidase S24/S26, beta-ribbon domain SRM_RS02435 89893b526da7f4a3c970239fbfd28683 140 Pfam PF00717 Peptidase S24-like 55 121 2.8E-15 T 22-04-2016 IPR019759 Peptidase S24/S26A/S26B SRM_RS02435 89893b526da7f4a3c970239fbfd28683 140 SUPERFAMILY SSF51306 19 137 4.01E-32 T 22-04-2016 IPR015927 Peptidase S24/S26A/S26B/S26C SRM_RS02435 89893b526da7f4a3c970239fbfd28683 140 PANTHER PTHR33516:SF1 18 139 2.4E-43 T 22-04-2016 SRM_RS02435 89893b526da7f4a3c970239fbfd28683 140 PRINTS PR00726 Repressor LexA serine protease (S24) family signature 63 74 1.8E-10 T 22-04-2016 IPR006197 Peptidase S24, LexA-like GO:0003677|GO:0006355 SRM_RS02435 89893b526da7f4a3c970239fbfd28683 140 PRINTS PR00726 Repressor LexA serine protease (S24) family signature 91 103 1.8E-10 T 22-04-2016 IPR006197 Peptidase S24, LexA-like GO:0003677|GO:0006355 SRM_RS02435 89893b526da7f4a3c970239fbfd28683 140 PRINTS PR00726 Repressor LexA serine protease (S24) family signature 52 62 1.8E-10 T 22-04-2016 IPR006197 Peptidase S24, LexA-like GO:0003677|GO:0006355 SRM_RS02435 89893b526da7f4a3c970239fbfd28683 140 PANTHER PTHR33516 18 139 2.4E-43 T 22-04-2016 SRM_RS15490 fbc959a64465b49d748f2676b767c067 336 Pfam PF01409 tRNA synthetases class II core domain (F) 89 336 3.7E-98 T 22-04-2016 IPR002319 Phenylalanyl-tRNA synthetase GO:0000049|GO:0004812|GO:0005524|GO:0005737|GO:0043039 KEGG: 00970+6.1.1.20 SRM_RS15490 fbc959a64465b49d748f2676b767c067 336 Gene3D G3DSA:3.30.930.10 13 336 1.2E-117 T 22-04-2016 SRM_RS15490 fbc959a64465b49d748f2676b767c067 336 PANTHER PTHR11538 89 336 2.7E-94 T 22-04-2016 SRM_RS15490 fbc959a64465b49d748f2676b767c067 336 Hamap MF_00281 Phenylalanine--tRNA ligase alpha subunit [pheS]. 5 336 42.204 T 22-04-2016 IPR022911 Phenylalanine-tRNA ligase alpha chain 1, bacterial GO:0004826 KEGG: 00970+6.1.1.20 SRM_RS15490 fbc959a64465b49d748f2676b767c067 336 SUPERFAMILY SSF55681 88 336 1.27E-76 T 22-04-2016 SRM_RS15490 fbc959a64465b49d748f2676b767c067 336 SUPERFAMILY SSF46589 13 96 2.25E-14 T 22-04-2016 IPR010978 tRNA-binding arm GO:0000166 Reactome: REACT_71 SRM_RS15490 fbc959a64465b49d748f2676b767c067 336 Pfam PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain 19 83 1.6E-19 T 22-04-2016 IPR004188 Phenylalanine-tRNA ligase, class II, N-terminal GO:0000166|GO:0004826|GO:0005524|GO:0005737|GO:0006432 KEGG: 00970+6.1.1.20 SRM_RS15490 fbc959a64465b49d748f2676b767c067 336 TIGRFAM TIGR00468 pheS: phenylalanine--tRNA ligase, alpha subunit 41 336 2.0E-94 T 22-04-2016 IPR004529 Phenylalanyl-tRNA synthetase, class IIc, alpha subunit GO:0000166|GO:0004826|GO:0005524|GO:0005737|GO:0006432 KEGG: 00970+6.1.1.20 SRM_RS14720 82fd9c47c9fe494441f90b1504595362 754 PIRSF PIRSF001587 7 754 8.2E-290 T 22-04-2016 IPR010074 Phosphoribosylformylglycinamidine subunit PurL GO:0004642|GO:0005737|GO:0006189 KEGG: 00230+6.3.5.3|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|UniPathway: UPA00074 SRM_RS14720 82fd9c47c9fe494441f90b1504595362 754 Hamap MF_00420 Phosphoribosylformylglycinamidine synthase subunit PurL [purL]. 1 754 305.124 T 22-04-2016 IPR010074 Phosphoribosylformylglycinamidine subunit PurL GO:0004642|GO:0005737|GO:0006189 KEGG: 00230+6.3.5.3|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|UniPathway: UPA00074 SRM_RS14720 82fd9c47c9fe494441f90b1504595362 754 SUPERFAMILY SSF56042 579 752 1.24E-29 T 22-04-2016 IPR010918 AIR synthase-related protein, C-terminal domain SRM_RS14720 82fd9c47c9fe494441f90b1504595362 754 Pfam PF02769 AIR synthase related protein, C-terminal domain 581 723 9.7E-15 T 22-04-2016 IPR010918 AIR synthase-related protein, C-terminal domain SRM_RS14720 82fd9c47c9fe494441f90b1504595362 754 Pfam PF02769 AIR synthase related protein, C-terminal domain 206 360 3.0E-33 T 22-04-2016 IPR010918 AIR synthase-related protein, C-terminal domain SRM_RS14720 82fd9c47c9fe494441f90b1504595362 754 PANTHER PTHR10099 21 754 0.0 T 22-04-2016 SRM_RS14720 82fd9c47c9fe494441f90b1504595362 754 SUPERFAMILY SSF56042 205 433 3.74E-51 T 22-04-2016 IPR010918 AIR synthase-related protein, C-terminal domain SRM_RS14720 82fd9c47c9fe494441f90b1504595362 754 PANTHER PTHR10099:SF2 21 754 0.0 T 22-04-2016 SRM_RS14720 82fd9c47c9fe494441f90b1504595362 754 TIGRFAM TIGR01736 FGAM_synth_II: phosphoribosylformylglycinamidine synthase II 21 749 1.4E-268 T 22-04-2016 IPR010074 Phosphoribosylformylglycinamidine subunit PurL GO:0004642|GO:0005737|GO:0006189 KEGG: 00230+6.3.5.3|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|UniPathway: UPA00074 SRM_RS14720 82fd9c47c9fe494441f90b1504595362 754 SUPERFAMILY SSF55326 401 572 1.7E-54 T 22-04-2016 SRM_RS14720 82fd9c47c9fe494441f90b1504595362 754 Gene3D G3DSA:3.30.1330.10 421 570 4.4E-58 T 22-04-2016 IPR016188 PurM-like, N-terminal domain SRM_RS14720 82fd9c47c9fe494441f90b1504595362 754 Gene3D G3DSA:3.30.1330.10 53 198 5.9E-46 T 22-04-2016 IPR016188 PurM-like, N-terminal domain SRM_RS14720 82fd9c47c9fe494441f90b1504595362 754 Pfam PF00586 AIR synthase related protein, N-terminal domain 449 566 8.8E-24 T 22-04-2016 IPR016188 PurM-like, N-terminal domain SRM_RS14720 82fd9c47c9fe494441f90b1504595362 754 Pfam PF00586 AIR synthase related protein, N-terminal domain 91 193 4.8E-24 T 22-04-2016 IPR016188 PurM-like, N-terminal domain SRM_RS14720 82fd9c47c9fe494441f90b1504595362 754 SUPERFAMILY SSF55326 18 197 1.08E-49 T 22-04-2016 SRM_RS05300 6df6a54732ec173c80b91b8e29fcceef 188 PANTHER PTHR17224 6 188 2.9E-59 T 22-04-2016 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 SRM_RS05300 6df6a54732ec173c80b91b8e29fcceef 188 ProSitePatterns PS01195 Peptidyl-tRNA hydrolase signature 1. 18 31 - T 22-04-2016 IPR018171 Peptidyl-tRNA hydrolase, conserved site GO:0004045 MetaCyc: PWY-6308 SRM_RS05300 6df6a54732ec173c80b91b8e29fcceef 188 Gene3D G3DSA:3.40.50.1470 2 188 2.4E-60 T 22-04-2016 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 SRM_RS05300 6df6a54732ec173c80b91b8e29fcceef 188 SUPERFAMILY SSF53178 6 188 4.19E-55 T 22-04-2016 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 SRM_RS05300 6df6a54732ec173c80b91b8e29fcceef 188 TIGRFAM TIGR00447 pth: aminoacyl-tRNA hydrolase 6 188 2.3E-51 T 22-04-2016 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 SRM_RS05300 6df6a54732ec173c80b91b8e29fcceef 188 Pfam PF01195 Peptidyl-tRNA hydrolase 8 187 8.0E-49 T 22-04-2016 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 SRM_RS05300 6df6a54732ec173c80b91b8e29fcceef 188 Hamap MF_00083 Peptidyl-tRNA hydrolase [pth]. 5 181 29.676 T 22-04-2016 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 SRM_RS08100 5a80b317825bc8dbd47268c22540a1cd 564 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 287 301 1.32E-46 T 22-04-2016 IPR020591 Chromosomal replication control, initiator DnaA-like SRM_RS08100 5a80b317825bc8dbd47268c22540a1cd 564 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 319 333 1.32E-46 T 22-04-2016 IPR020591 Chromosomal replication control, initiator DnaA-like SRM_RS08100 5a80b317825bc8dbd47268c22540a1cd 564 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 255 275 1.32E-46 T 22-04-2016 IPR020591 Chromosomal replication control, initiator DnaA-like SRM_RS08100 5a80b317825bc8dbd47268c22540a1cd 564 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 515 534 1.32E-46 T 22-04-2016 IPR020591 Chromosomal replication control, initiator DnaA-like SRM_RS08100 5a80b317825bc8dbd47268c22540a1cd 564 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 353 380 1.32E-46 T 22-04-2016 IPR020591 Chromosomal replication control, initiator DnaA-like SRM_RS08100 5a80b317825bc8dbd47268c22540a1cd 564 Gene3D G3DSA:1.10.1750.10 458 557 7.0E-38 T 22-04-2016 IPR013159 Chromosomal replication initiator, DnaA C-terminal GO:0005524|GO:0006270|GO:0006275|GO:0043565 SRM_RS08100 5a80b317825bc8dbd47268c22540a1cd 564 Pfam PF00308 Bacterial dnaA protein 221 438 1.8E-89 T 22-04-2016 IPR013317 Chromosomal replication initiator protein DnaA SRM_RS08100 5a80b317825bc8dbd47268c22540a1cd 564 Pfam PF11638 DnaA N-terminal domain 7 72 1.3E-8 T 22-04-2016 IPR024633 DnaA N-terminal domain SRM_RS08100 5a80b317825bc8dbd47268c22540a1cd 564 ProSitePatterns PS01008 DnaA protein signature. 515 534 - T 22-04-2016 IPR018312 Chromosomal replication control, initiator DnaA, conserved site GO:0003677|GO:0003688|GO:0005524|GO:0006270|GO:0006275 SRM_RS08100 5a80b317825bc8dbd47268c22540a1cd 564 PANTHER PTHR30050 4 109 3.3E-179 T 22-04-2016 SRM_RS08100 5a80b317825bc8dbd47268c22540a1cd 564 PANTHER PTHR30050 219 558 3.3E-179 T 22-04-2016 SRM_RS08100 5a80b317825bc8dbd47268c22540a1cd 564 SMART SM00760 465 534 7.6E-37 T 22-04-2016 IPR013159 Chromosomal replication initiator, DnaA C-terminal GO:0005524|GO:0006270|GO:0006275|GO:0043565 SRM_RS08100 5a80b317825bc8dbd47268c22540a1cd 564 SMART SM00382 254 382 3.3E-6 T 22-04-2016 IPR003593 AAA+ ATPase domain SRM_RS08100 5a80b317825bc8dbd47268c22540a1cd 564 SUPERFAMILY SSF48295 461 557 2.01E-33 T 22-04-2016 IPR010921 Trp repressor/replication initiator GO:0043565 SRM_RS08100 5a80b317825bc8dbd47268c22540a1cd 564 Gene3D G3DSA:1.10.8.60 388 456 6.9E-24 T 22-04-2016 SRM_RS08100 5a80b317825bc8dbd47268c22540a1cd 564 SUPERFAMILY SSF52540 221 433 1.45E-44 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SRM_RS08100 5a80b317825bc8dbd47268c22540a1cd 564 Gene3D G3DSA:3.40.50.300 217 385 1.2E-56 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SRM_RS08100 5a80b317825bc8dbd47268c22540a1cd 564 Pfam PF08299 Bacterial dnaA protein helix-turn-helix 467 534 5.2E-31 T 22-04-2016 IPR013159 Chromosomal replication initiator, DnaA C-terminal GO:0005524|GO:0006270|GO:0006275|GO:0043565 SRM_RS08100 5a80b317825bc8dbd47268c22540a1cd 564 PANTHER PTHR30050:SF2 4 109 3.3E-179 T 22-04-2016 SRM_RS08100 5a80b317825bc8dbd47268c22540a1cd 564 PANTHER PTHR30050:SF2 219 558 3.3E-179 T 22-04-2016 SRM_RS08100 5a80b317825bc8dbd47268c22540a1cd 564 Hamap MF_00377 Chromosomal replication initiator protein DnaA [dnaA]. 6 556 31.409 T 22-04-2016 IPR001957 Chromosomal replication control, initiator DnaA GO:0003677|GO:0003688|GO:0005524|GO:0006270|GO:0006275 SRM_RS08100 5a80b317825bc8dbd47268c22540a1cd 564 TIGRFAM TIGR00362 DnaA: chromosomal replication initiator protein DnaA 9 555 1.4E-154 T 22-04-2016 IPR001957 Chromosomal replication control, initiator DnaA GO:0003677|GO:0003688|GO:0005524|GO:0006270|GO:0006275 SRM_RS09270 f1d58d166dec6beea870270c7d80d311 657 Pfam PF00571 CBS domain 507 562 4.1E-9 T 22-04-2016 IPR000644 CBS domain SRM_RS09270 f1d58d166dec6beea870270c7d80d311 657 Pfam PF00571 CBS domain 574 625 4.2E-13 T 22-04-2016 IPR000644 CBS domain SRM_RS09270 f1d58d166dec6beea870270c7d80d311 657 PANTHER PTHR11911 504 635 3.5E-26 T 22-04-2016 SRM_RS09270 f1d58d166dec6beea870270c7d80d311 657 Pfam PF04107 Glutamate-cysteine ligase family 2(GCS2) 46 272 1.6E-6 T 22-04-2016 IPR006336 Glutamate--cysteine ligase, GCS2 GO:0004357|GO:0042398 KEGG: 00270+6.3.2.2|KEGG: 00480+6.3.2.2|MetaCyc: PWY-6840|MetaCyc: PWY-7255 SRM_RS09270 f1d58d166dec6beea870270c7d80d311 657 SUPERFAMILY SSF55931 311 461 2.45E-45 T 22-04-2016 SRM_RS09270 f1d58d166dec6beea870270c7d80d311 657 SUPERFAMILY SSF55931 36 265 2.45E-45 T 22-04-2016 SRM_RS09270 f1d58d166dec6beea870270c7d80d311 657 Gene3D G3DSA:3.10.580.10 506 626 2.1E-30 T 22-04-2016 SRM_RS09270 f1d58d166dec6beea870270c7d80d311 657 SUPERFAMILY SSF54631 502 625 1.46E-30 T 22-04-2016 SRM_RS09270 f1d58d166dec6beea870270c7d80d311 657 SMART SM00116 581 628 1.3E-12 T 22-04-2016 IPR000644 CBS domain SRM_RS09270 f1d58d166dec6beea870270c7d80d311 657 SMART SM00116 514 562 4.0E-6 T 22-04-2016 IPR000644 CBS domain SRM_RS10810 0fa19cecfc89529013f2573732481164 146 Pfam PF00293 NUDIX domain 9 125 1.3E-15 T 22-04-2016 IPR000086 NUDIX hydrolase domain GO:0016787 SRM_RS10810 0fa19cecfc89529013f2573732481164 146 Gene3D G3DSA:3.90.79.10 9 141 1.4E-28 T 22-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 SRM_RS10810 0fa19cecfc89529013f2573732481164 146 PANTHER PTHR22769 6 135 2.8E-20 T 22-04-2016 SRM_RS10810 0fa19cecfc89529013f2573732481164 146 SUPERFAMILY SSF55811 8 139 3.11E-28 T 22-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 SRM_RS02060 a5a7d2dd1e244e41594e654140ef9045 408 PANTHER PTHR30405 7 373 9.0E-109 T 22-04-2016 SRM_RS02060 a5a7d2dd1e244e41594e654140ef9045 408 PANTHER PTHR30405:SF5 7 373 9.0E-109 T 22-04-2016 SRM_RS02060 a5a7d2dd1e244e41594e654140ef9045 408 Pfam PF12323 Helix-turn-helix domain 4 47 2.6E-19 T 22-04-2016 IPR021027 Transposase, putative, helix-turn-helix domain SRM_RS02060 a5a7d2dd1e244e41594e654140ef9045 408 TIGRFAM TIGR01766 tspaseT_teng_C: transposase, IS605 OrfB family 255 328 1.2E-14 T 22-04-2016 IPR010095 Transposase IS605, OrfB, C-terminal SRM_RS02060 a5a7d2dd1e244e41594e654140ef9045 408 Pfam PF01385 Probable transposase 178 287 1.9E-22 T 22-04-2016 IPR001959 Probable transposase, IS891/IS1136/IS1341 SRM_RS02060 a5a7d2dd1e244e41594e654140ef9045 408 Pfam PF07282 Putative transposase DNA-binding domain 301 369 8.9E-23 T 22-04-2016 IPR010095 Transposase IS605, OrfB, C-terminal SRM_RS01015 a0d11b2511b03c4388fa01c741425a23 627 Hamap MF_01810 Membrane protein insertase YidC [yidC]. 2 586 14.642 T 22-04-2016 IPR019998 Membrane insertase YidC GO:0016021|GO:0051205 SRM_RS01015 a0d11b2511b03c4388fa01c741425a23 627 Pfam PF02096 60Kd inner membrane protein 390 583 1.3E-55 T 22-04-2016 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 SRM_RS01015 a0d11b2511b03c4388fa01c741425a23 627 PANTHER PTHR12428:SF14 389 590 2.3E-54 T 22-04-2016 SRM_RS01015 a0d11b2511b03c4388fa01c741425a23 627 PANTHER PTHR12428 389 590 2.3E-54 T 22-04-2016 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 SRM_RS01015 a0d11b2511b03c4388fa01c741425a23 627 TIGRFAM TIGR03593 yidC_nterm: membrane protein insertase, YidC/Oxa1 family, N-terminal domain 1 365 4.1E-35 T 22-04-2016 IPR028053 Membrane insertase YidC, N-terminal SRM_RS01015 a0d11b2511b03c4388fa01c741425a23 627 TIGRFAM TIGR03592 yidC_oxa1_cterm: membrane protein insertase, YidC/Oxa1 family 390 583 6.6E-61 T 22-04-2016 IPR028055 Membrane insertase YidC/Oxa1, C-terminal SRM_RS01015 a0d11b2511b03c4388fa01c741425a23 627 PRINTS PR00701 60kDa inner membrane protein signature 451 474 8.8E-13 T 22-04-2016 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 SRM_RS01015 a0d11b2511b03c4388fa01c741425a23 627 PRINTS PR00701 60kDa inner membrane protein signature 179 199 8.8E-13 T 22-04-2016 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 SRM_RS01015 a0d11b2511b03c4388fa01c741425a23 627 PRINTS PR00701 60kDa inner membrane protein signature 93 114 8.8E-13 T 22-04-2016 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 SRM_RS01015 a0d11b2511b03c4388fa01c741425a23 627 Pfam PF14849 YidC periplasmic domain 87 365 6.0E-41 T 22-04-2016 IPR028053 Membrane insertase YidC, N-terminal SRM_RS05020 8f6f9de6c5667318155bdbff578734ba 156 Pfam PF13384 Homeodomain-like domain 24 71 1.1E-9 T 22-04-2016 SRM_RS05020 8f6f9de6c5667318155bdbff578734ba 156 SUPERFAMILY SSF46689 11 134 1.7E-10 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 SRM_RS05020 8f6f9de6c5667318155bdbff578734ba 156 Gene3D G3DSA:1.10.10.60 37 101 8.4E-5 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 SRM_RS11465 8f6f9de6c5667318155bdbff578734ba 156 Pfam PF13384 Homeodomain-like domain 24 71 1.1E-9 T 22-04-2016 SRM_RS11465 8f6f9de6c5667318155bdbff578734ba 156 SUPERFAMILY SSF46689 11 134 1.7E-10 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 SRM_RS11465 8f6f9de6c5667318155bdbff578734ba 156 Gene3D G3DSA:1.10.10.60 37 101 8.4E-5 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 SRM_RS02395 1ffca4f3b24997f90c8bb4efd3c14ea8 1168 Gene3D G3DSA:3.90.226.10 978 1166 3.0E-20 T 22-04-2016 IPR029045 ClpP/crotonase-like domain SRM_RS02395 1ffca4f3b24997f90c8bb4efd3c14ea8 1168 PANTHER PTHR34978:SF2 6 426 4.6E-30 T 22-04-2016 SRM_RS02395 1ffca4f3b24997f90c8bb4efd3c14ea8 1168 Gene3D G3DSA:2.30.42.10 859 947 2.6E-6 T 22-04-2016 IPR001478 PDZ domain GO:0005515 SRM_RS02395 1ffca4f3b24997f90c8bb4efd3c14ea8 1168 Pfam PF03572 Peptidase family S41 987 1141 3.0E-11 T 22-04-2016 IPR005151 Tail specific protease GO:0006508|GO:0008236 SRM_RS02395 1ffca4f3b24997f90c8bb4efd3c14ea8 1168 PANTHER PTHR34978 6 426 4.6E-30 T 22-04-2016 SRM_RS02395 1ffca4f3b24997f90c8bb4efd3c14ea8 1168 SUPERFAMILY SSF52096 783 871 2.49E-29 T 22-04-2016 IPR029045 ClpP/crotonase-like domain SRM_RS02395 1ffca4f3b24997f90c8bb4efd3c14ea8 1168 SUPERFAMILY SSF52096 970 1157 2.49E-29 T 22-04-2016 IPR029045 ClpP/crotonase-like domain SRM_RS02395 1ffca4f3b24997f90c8bb4efd3c14ea8 1168 Pfam PF05569 BlaR1 peptidase M56 163 351 6.9E-30 T 22-04-2016 IPR008756 Peptidase M56 SRM_RS02395 1ffca4f3b24997f90c8bb4efd3c14ea8 1168 SMART SM00245 949 1143 0.0094 T 22-04-2016 IPR005151 Tail specific protease GO:0006508|GO:0008236 SRM_RS03925 6d26c3750b60b7d98f974f58c0362389 1026 Pfam PF02563 Polysaccharide biosynthesis/export protein 251 314 1.2E-11 T 22-04-2016 IPR003715 Polysaccharide export protein GO:0015159|GO:0015774|GO:0016020 SRM_RS03925 6d26c3750b60b7d98f974f58c0362389 1026 SUPERFAMILY SSF142984 613 657 7.72E-6 T 22-04-2016 SRM_RS03925 6d26c3750b60b7d98f974f58c0362389 1026 SUPERFAMILY SSF142984 421 454 4.84E-5 T 22-04-2016 SRM_RS03925 6d26c3750b60b7d98f974f58c0362389 1026 Gene3D G3DSA:3.10.560.10 909 961 7.0E-4 T 22-04-2016 SRM_RS03925 6d26c3750b60b7d98f974f58c0362389 1026 Gene3D G3DSA:3.10.560.10 822 908 1.2E-15 T 22-04-2016 SRM_RS03925 6d26c3750b60b7d98f974f58c0362389 1026 Gene3D G3DSA:3.10.560.10 415 505 4.6E-14 T 22-04-2016 SRM_RS03925 6d26c3750b60b7d98f974f58c0362389 1026 Gene3D G3DSA:3.10.560.10 327 414 6.0E-16 T 22-04-2016 SRM_RS03925 6d26c3750b60b7d98f974f58c0362389 1026 Gene3D G3DSA:3.10.560.10 612 700 2.1E-12 T 22-04-2016 SRM_RS03925 6d26c3750b60b7d98f974f58c0362389 1026 Gene3D G3DSA:3.10.560.10 708 813 7.4E-13 T 22-04-2016 SRM_RS03925 6d26c3750b60b7d98f974f58c0362389 1026 Gene3D G3DSA:3.10.560.10 516 604 6.6E-15 T 22-04-2016 SRM_RS03925 6d26c3750b60b7d98f974f58c0362389 1026 Gene3D G3DSA:3.30.1950.10 258 314 6.5E-10 T 22-04-2016 SRM_RS03925 6d26c3750b60b7d98f974f58c0362389 1026 PANTHER PTHR33619:SF1 669 763 3.1E-97 T 22-04-2016 SRM_RS03925 6d26c3750b60b7d98f974f58c0362389 1026 PANTHER PTHR33619:SF1 613 647 3.1E-97 T 22-04-2016 SRM_RS03925 6d26c3750b60b7d98f974f58c0362389 1026 PANTHER PTHR33619:SF1 230 596 3.1E-97 T 22-04-2016 SRM_RS03925 6d26c3750b60b7d98f974f58c0362389 1026 Pfam PF10531 SLBB domain 421 465 1.2E-11 T 22-04-2016 IPR019554 Soluble ligand binding domain SRM_RS03925 6d26c3750b60b7d98f974f58c0362389 1026 Pfam PF10531 SLBB domain 525 568 5.0E-5 T 22-04-2016 IPR019554 Soluble ligand binding domain SRM_RS03925 6d26c3750b60b7d98f974f58c0362389 1026 Pfam PF10531 SLBB domain 337 385 3.4E-8 T 22-04-2016 IPR019554 Soluble ligand binding domain SRM_RS03925 6d26c3750b60b7d98f974f58c0362389 1026 Pfam PF10531 SLBB domain 824 868 9.3E-5 T 22-04-2016 IPR019554 Soluble ligand binding domain SRM_RS03925 6d26c3750b60b7d98f974f58c0362389 1026 Pfam PF10531 SLBB domain 712 757 1.5E-7 T 22-04-2016 IPR019554 Soluble ligand binding domain SRM_RS03925 6d26c3750b60b7d98f974f58c0362389 1026 Pfam PF10531 SLBB domain 614 675 1.2E-18 T 22-04-2016 IPR019554 Soluble ligand binding domain SRM_RS03925 6d26c3750b60b7d98f974f58c0362389 1026 PANTHER PTHR33619 669 763 3.1E-97 T 22-04-2016 SRM_RS03925 6d26c3750b60b7d98f974f58c0362389 1026 PANTHER PTHR33619 613 647 3.1E-97 T 22-04-2016 SRM_RS03925 6d26c3750b60b7d98f974f58c0362389 1026 PANTHER PTHR33619 230 596 3.1E-97 T 22-04-2016 SRM_RS14550 112f5be49edcdf637df6a83a8a4fb343 112 ProSitePatterns PS00588 Flagella basal body rod proteins signature. 12 32 - T 22-04-2016 IPR019776 Flagellar basal body rod protein, conserved site SRM_RS14550 112f5be49edcdf637df6a83a8a4fb343 112 Pfam PF00460 Flagella basal body rod protein 10 35 4.8E-6 T 22-04-2016 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 SRM_RS11120 62e6aed4d2780fd2d1fa278b8009234b 230 TIGRFAM TIGR00080 pimt: protein-L-isoaspartate O-methyltransferase 12 227 1.9E-55 T 22-04-2016 IPR000682 Protein-L-isoaspartate(D-aspartate) O-methyltransferase GO:0004719|GO:0006464 SRM_RS11120 62e6aed4d2780fd2d1fa278b8009234b 230 PANTHER PTHR11579 1 227 5.4E-66 T 22-04-2016 IPR000682 Protein-L-isoaspartate(D-aspartate) O-methyltransferase GO:0004719|GO:0006464 SRM_RS11120 62e6aed4d2780fd2d1fa278b8009234b 230 ProSitePatterns PS01279 Protein-L-isoaspartate(D-aspartate) O-methyltransferase signature. 138 153 - T 22-04-2016 IPR000682 Protein-L-isoaspartate(D-aspartate) O-methyltransferase GO:0004719|GO:0006464 SRM_RS11120 62e6aed4d2780fd2d1fa278b8009234b 230 Pfam PF01135 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) 14 225 3.5E-53 T 22-04-2016 SRM_RS11120 62e6aed4d2780fd2d1fa278b8009234b 230 Hamap MF_00090 Protein-L-isoaspartate O-methyltransferase [pcm]. 9 228 33.651 T 22-04-2016 IPR000682 Protein-L-isoaspartate(D-aspartate) O-methyltransferase GO:0004719|GO:0006464 SRM_RS11120 62e6aed4d2780fd2d1fa278b8009234b 230 SUPERFAMILY SSF53335 13 224 1.1E-42 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SRM_RS11120 62e6aed4d2780fd2d1fa278b8009234b 230 Gene3D G3DSA:3.40.50.150 5 225 1.9E-55 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SRM_RS05305 cd68c5ac48466c28dcee1c0e6f6982f5 250 Gene3D G3DSA:2.170.120.20 115 201 9.9E-21 T 22-04-2016 IPR020057 Ribosomal protein L25, beta domain SRM_RS05305 cd68c5ac48466c28dcee1c0e6f6982f5 250 Gene3D G3DSA:2.40.240.10 24 111 2.9E-21 T 22-04-2016 IPR020056 Ribosomal protein L25/Gln-tRNA synthetase, beta-barrel domain Reactome: REACT_71 SRM_RS05305 cd68c5ac48466c28dcee1c0e6f6982f5 250 Pfam PF01386 Ribosomal L25p family 25 109 1.1E-21 T 22-04-2016 IPR029751 Ribosomal protein L25 GO:0003735|GO:0005840|GO:0006412|GO:0008097 SRM_RS05305 cd68c5ac48466c28dcee1c0e6f6982f5 250 Hamap MF_01334 50S ribosomal protein L25 [rplY]. 23 196 22.62 T 22-04-2016 IPR001021 Ribosomal protein L25, long-form GO:0003735|GO:0005840|GO:0006412|GO:0008097 SRM_RS05305 cd68c5ac48466c28dcee1c0e6f6982f5 250 TIGRFAM TIGR00731 bL25_bact_ctc: ribosomal protein bL25, Ctc-form 28 194 2.4E-31 T 22-04-2016 IPR001021 Ribosomal protein L25, long-form GO:0003735|GO:0005840|GO:0006412|GO:0008097 SRM_RS05305 cd68c5ac48466c28dcee1c0e6f6982f5 250 ProDom PD012503 RIBOSOMAL L25 50S RRNA-BINDING RNA-BINDING RIBONUCLEOPROTEIN STRESS GENERAL CTC RRNA 31 109 1.0E-9 T 22-04-2016 IPR029751 Ribosomal protein L25 GO:0003735|GO:0005840|GO:0006412|GO:0008097 SRM_RS05305 cd68c5ac48466c28dcee1c0e6f6982f5 250 Pfam PF14693 Ribosomal protein TL5, C-terminal domain 117 198 4.5E-20 T 22-04-2016 IPR020057 Ribosomal protein L25, beta domain SRM_RS05305 cd68c5ac48466c28dcee1c0e6f6982f5 250 SUPERFAMILY SSF50715 31 198 3.31E-42 T 22-04-2016 IPR011035 Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain GO:0006412 Reactome: REACT_71 SRM_RS05305 cd68c5ac48466c28dcee1c0e6f6982f5 250 PANTHER PTHR33284 24 226 1.0E-38 T 22-04-2016 SRM_RS05305 cd68c5ac48466c28dcee1c0e6f6982f5 250 PANTHER PTHR33284:SF1 24 226 1.0E-38 T 22-04-2016 SRM_RS06900 adf3e9ca9bc206cee524b6c1ba18ac44 240 Pfam PF07973 Threonyl and Alanyl tRNA synthetase second additional domain 192 235 2.7E-12 T 22-04-2016 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0005524|GO:0016876|GO:0043039 SRM_RS06900 adf3e9ca9bc206cee524b6c1ba18ac44 240 SUPERFAMILY SSF55186 94 236 1.24E-35 T 22-04-2016 IPR018163 Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain GO:0000166 SRM_RS06900 adf3e9ca9bc206cee524b6c1ba18ac44 240 SUPERFAMILY SSF50447 9 85 4.59E-16 T 22-04-2016 IPR009000 Translation protein, beta-barrel domain SRM_RS06900 adf3e9ca9bc206cee524b6c1ba18ac44 240 PANTHER PTHR11777 2 236 2.0E-63 T 22-04-2016 SRM_RS06900 adf3e9ca9bc206cee524b6c1ba18ac44 240 Pfam PF01411 tRNA synthetases class II (A) 14 94 4.7E-15 T 22-04-2016 IPR018164 Alanyl-tRNA synthetase, class IIc, N-terminal GO:0000166|GO:0004813|GO:0005524|GO:0006419 KEGG: 00970+6.1.1.7 SRM_RS06900 adf3e9ca9bc206cee524b6c1ba18ac44 240 SMART SM00863 192 235 2.3E-14 T 22-04-2016 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0005524|GO:0016876|GO:0043039 SRM_RS07275 50a80c6090bc4e7b6c9f5f7dc62b7464 632 SUPERFAMILY SSF56801 356 619 2.22E-113 T 22-04-2016 SRM_RS07275 50a80c6090bc4e7b6c9f5f7dc62b7464 632 SUPERFAMILY SSF56801 19 309 2.22E-113 T 22-04-2016 SRM_RS07275 50a80c6090bc4e7b6c9f5f7dc62b7464 632 PANTHER PTHR24096 20 621 4.4E-179 T 22-04-2016 SRM_RS07275 50a80c6090bc4e7b6c9f5f7dc62b7464 632 Gene3D G3DSA:2.30.38.10 416 477 3.8E-22 T 22-04-2016 SRM_RS07275 50a80c6090bc4e7b6c9f5f7dc62b7464 632 ProSitePatterns PS00455 Putative AMP-binding domain signature. 204 215 - T 22-04-2016 IPR020845 AMP-binding, conserved site SRM_RS07275 50a80c6090bc4e7b6c9f5f7dc62b7464 632 Gene3D G3DSA:3.40.50.980 189 210 3.3E-31 T 22-04-2016 SRM_RS07275 50a80c6090bc4e7b6c9f5f7dc62b7464 632 Gene3D G3DSA:3.40.50.980 19 156 3.3E-31 T 22-04-2016 SRM_RS07275 50a80c6090bc4e7b6c9f5f7dc62b7464 632 Pfam PF00501 AMP-binding enzyme 44 487 6.0E-97 T 22-04-2016 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 SRM_RS07275 50a80c6090bc4e7b6c9f5f7dc62b7464 632 PRINTS PR00154 AMP-binding signature 211 219 5.2E-5 T 22-04-2016 IPR020459 AMP-binding SRM_RS07275 50a80c6090bc4e7b6c9f5f7dc62b7464 632 PRINTS PR00154 AMP-binding signature 199 210 5.2E-5 T 22-04-2016 IPR020459 AMP-binding SRM_RS07275 50a80c6090bc4e7b6c9f5f7dc62b7464 632 Gene3D G3DSA:3.40.50.980 353 415 9.4E-33 T 22-04-2016 SRM_RS07275 50a80c6090bc4e7b6c9f5f7dc62b7464 632 Gene3D G3DSA:3.40.50.980 211 304 9.4E-33 T 22-04-2016 SRM_RS07275 50a80c6090bc4e7b6c9f5f7dc62b7464 632 PANTHER PTHR24096:SF193 20 621 4.4E-179 T 22-04-2016 SRM_RS05610 3e63f35505dd23c89706a4f90e9bfb41 668 PANTHER PTHR24423 290 668 1.9E-92 T 22-04-2016 SRM_RS05610 3e63f35505dd23c89706a4f90e9bfb41 668 PANTHER PTHR24423 72 87 1.9E-92 T 22-04-2016 SRM_RS05610 3e63f35505dd23c89706a4f90e9bfb41 668 SUPERFAMILY SSF47384 419 498 1.37E-16 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SRM_RS05610 3e63f35505dd23c89706a4f90e9bfb41 668 Gene3D G3DSA:3.30.565.10 499 653 2.2E-41 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SRM_RS05610 3e63f35505dd23c89706a4f90e9bfb41 668 SMART SM00387 542 653 4.9E-32 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SRM_RS05610 3e63f35505dd23c89706a4f90e9bfb41 668 SUPERFAMILY SSF55785 295 410 1.71E-16 T 22-04-2016 IPR000014 PAS domain SRM_RS05610 3e63f35505dd23c89706a4f90e9bfb41 668 Pfam PF13426 PAS domain 317 412 6.7E-10 T 22-04-2016 IPR000014 PAS domain SRM_RS05610 3e63f35505dd23c89706a4f90e9bfb41 668 Gene3D G3DSA:3.30.450.20 295 409 4.1E-16 T 22-04-2016 SRM_RS05610 3e63f35505dd23c89706a4f90e9bfb41 668 SMART SM00388 433 497 7.4E-16 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SRM_RS05610 3e63f35505dd23c89706a4f90e9bfb41 668 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 302 419 3.2E-13 T 22-04-2016 IPR000014 PAS domain SRM_RS05610 3e63f35505dd23c89706a4f90e9bfb41 668 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 543 651 4.8E-24 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SRM_RS05610 3e63f35505dd23c89706a4f90e9bfb41 668 Gene3D G3DSA:1.10.287.130 425 492 3.1E-15 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SRM_RS05610 3e63f35505dd23c89706a4f90e9bfb41 668 PRINTS PR00344 Bacterial sensor protein C-terminal signature 596 606 2.8E-17 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SRM_RS05610 3e63f35505dd23c89706a4f90e9bfb41 668 PRINTS PR00344 Bacterial sensor protein C-terminal signature 578 592 2.8E-17 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SRM_RS05610 3e63f35505dd23c89706a4f90e9bfb41 668 PRINTS PR00344 Bacterial sensor protein C-terminal signature 613 631 2.8E-17 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SRM_RS05610 3e63f35505dd23c89706a4f90e9bfb41 668 PRINTS PR00344 Bacterial sensor protein C-terminal signature 637 650 2.8E-17 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SRM_RS05610 3e63f35505dd23c89706a4f90e9bfb41 668 SMART SM00091 306 372 3.4E-4 T 22-04-2016 IPR000014 PAS domain SRM_RS05610 3e63f35505dd23c89706a4f90e9bfb41 668 Pfam PF00512 His Kinase A (phospho-acceptor) domain 434 497 5.0E-14 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SRM_RS05610 3e63f35505dd23c89706a4f90e9bfb41 668 SUPERFAMILY SSF55874 487 651 3.27E-41 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SRM_RS04840 82483febffc41ccc813883c13e3d80b3 460 SUPERFAMILY SSF51735 161 455 3.23E-36 T 22-04-2016 IPR016040 NAD(P)-binding domain SRM_RS04840 82483febffc41ccc813883c13e3d80b3 460 Gene3D G3DSA:3.30.530.20 1 116 1.4E-5 T 22-04-2016 IPR023393 START-like domain SRM_RS04840 82483febffc41ccc813883c13e3d80b3 460 Gene3D G3DSA:3.40.50.720 161 402 1.5E-21 T 22-04-2016 IPR016040 NAD(P)-binding domain SRM_RS04840 82483febffc41ccc813883c13e3d80b3 460 SUPERFAMILY SSF55961 1 142 1.08E-23 T 22-04-2016 SRM_RS04840 82483febffc41ccc813883c13e3d80b3 460 PANTHER PTHR11092 154 460 1.4E-124 T 22-04-2016 IPR010099 Epimerase family protein SDR39U1 SRM_RS04840 82483febffc41ccc813883c13e3d80b3 460 PANTHER PTHR11092:SF0 154 460 1.4E-124 T 22-04-2016 SRM_RS04840 82483febffc41ccc813883c13e3d80b3 460 Pfam PF01370 NAD dependent epimerase/dehydratase family 163 285 1.1E-7 T 22-04-2016 IPR001509 NAD-dependent epimerase/dehydratase, N-terminal domain GO:0003824|GO:0050662 SRM_RS04840 82483febffc41ccc813883c13e3d80b3 460 Pfam PF03364 Polyketide cyclase / dehydrase and lipid transport 11 122 1.6E-6 T 22-04-2016 IPR005031 Coenzyme Q-binding protein COQ10, START domain SRM_RS04840 82483febffc41ccc813883c13e3d80b3 460 TIGRFAM TIGR01777 yfcH: TIGR01777 family protein 162 448 1.7E-89 T 22-04-2016 IPR010099 Epimerase family protein SDR39U1 SRM_RS04840 82483febffc41ccc813883c13e3d80b3 460 Pfam PF08338 Domain of unknown function (DUF1731) 407 453 4.1E-12 T 22-04-2016 IPR013549 Domain of unknown function DUF1731 SRM_RS03715 a71139553de4188726beeb118ecc85aa 522 SUPERFAMILY SSF53623 142 365 1.83E-66 T 22-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 SRM_RS03715 a71139553de4188726beeb118ecc85aa 522 PANTHER PTHR23135 49 521 4.5E-174 T 22-04-2016 SRM_RS03715 a71139553de4188726beeb118ecc85aa 522 ProSitePatterns PS01011 Folylpolyglutamate synthase signature 1. 149 172 - T 22-04-2016 IPR018109 Folylpolyglutamate synthetase, conserved site GO:0004326|GO:0005524|GO:0009396 SRM_RS03715 a71139553de4188726beeb118ecc85aa 522 Pfam PF01225 Mur ligase family, catalytic domain 63 108 8.2E-7 T 22-04-2016 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 UniPathway: UPA00219 SRM_RS03715 a71139553de4188726beeb118ecc85aa 522 Gene3D G3DSA:3.40.1390.10 49 140 3.5E-19 T 22-04-2016 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 UniPathway: UPA00219 SRM_RS03715 a71139553de4188726beeb118ecc85aa 522 Pfam PF02875 Mur ligase family, glutamate ligase domain 367 453 4.4E-23 T 22-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 SRM_RS03715 a71139553de4188726beeb118ecc85aa 522 TIGRFAM TIGR01085 murE: UDP-N-acetylmuramyl-tripeptide synthetase 61 520 1.7E-149 T 22-04-2016 IPR005761 UDP-N-acetylmuramoylalanyl-D-glutamate-2,6-diaminopimelate ligase GO:0005524|GO:0005737|GO:0008360|GO:0016881|GO:0051301 UniPathway: UPA00219 SRM_RS03715 a71139553de4188726beeb118ecc85aa 522 PANTHER PTHR23135:SF4 49 521 4.5E-174 T 22-04-2016 SRM_RS03715 a71139553de4188726beeb118ecc85aa 522 Gene3D G3DSA:3.90.190.20 371 515 3.0E-54 T 22-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 SRM_RS03715 a71139553de4188726beeb118ecc85aa 522 SUPERFAMILY SSF63418 59 141 4.32E-17 T 22-04-2016 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 UniPathway: UPA00219 SRM_RS03715 a71139553de4188726beeb118ecc85aa 522 Gene3D G3DSA:3.40.1190.10 142 370 3.0E-74 T 22-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 SRM_RS03715 a71139553de4188726beeb118ecc85aa 522 Pfam PF08245 Mur ligase middle domain 151 345 2.8E-47 T 22-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 SRM_RS03715 a71139553de4188726beeb118ecc85aa 522 Hamap MF_00208 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [murE]. 39 521 33.05 T 22-04-2016 IPR005761 UDP-N-acetylmuramoylalanyl-D-glutamate-2,6-diaminopimelate ligase GO:0005524|GO:0005737|GO:0008360|GO:0016881|GO:0051301 UniPathway: UPA00219 SRM_RS03715 a71139553de4188726beeb118ecc85aa 522 SUPERFAMILY SSF53244 367 521 2.09E-47 T 22-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 SRM_RS15470 a38b97e015be6cdb8d84a7a91d5aa726 653 Pfam PF02824 TGS domain 6 65 3.2E-9 T 22-04-2016 IPR004095 TGS KEGG: 00970+6.1.1.3 SRM_RS15470 a38b97e015be6cdb8d84a7a91d5aa726 653 SUPERFAMILY SSF81271 6 66 1.73E-15 T 22-04-2016 IPR012676 TGS-like KEGG: 00970+6.1.1.3 SRM_RS15470 a38b97e015be6cdb8d84a7a91d5aa726 653 Pfam PF03129 Anticodon binding domain 557 642 6.5E-24 T 22-04-2016 IPR004154 Anticodon-binding SRM_RS15470 a38b97e015be6cdb8d84a7a91d5aa726 653 TIGRFAM TIGR00418 thrS: threonine--tRNA ligase 76 643 1.1E-214 T 22-04-2016 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 SRM_RS15470 a38b97e015be6cdb8d84a7a91d5aa726 653 SMART SM00863 173 222 1.2E-23 T 22-04-2016 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0005524|GO:0016876|GO:0043039 SRM_RS15470 a38b97e015be6cdb8d84a7a91d5aa726 653 Hamap MF_00184 Threonine--tRNA ligase [thrS]. 70 650 34.118 T 22-04-2016 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 SRM_RS15470 a38b97e015be6cdb8d84a7a91d5aa726 653 Gene3D G3DSA:3.40.50.800 547 643 4.1E-34 T 22-04-2016 IPR004154 Anticodon-binding SRM_RS15470 a38b97e015be6cdb8d84a7a91d5aa726 653 Pfam PF07973 Threonyl and Alanyl tRNA synthetase second additional domain 173 222 5.4E-14 T 22-04-2016 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0005524|GO:0016876|GO:0043039 SRM_RS15470 a38b97e015be6cdb8d84a7a91d5aa726 653 PANTHER PTHR11451 1 643 2.4E-292 T 22-04-2016 SRM_RS15470 a38b97e015be6cdb8d84a7a91d5aa726 653 PRINTS PR01047 Threonyl-tRNA synthetase signature 550 562 6.1E-52 T 22-04-2016 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 SRM_RS15470 a38b97e015be6cdb8d84a7a91d5aa726 653 PRINTS PR01047 Threonyl-tRNA synthetase signature 341 369 6.1E-52 T 22-04-2016 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 SRM_RS15470 a38b97e015be6cdb8d84a7a91d5aa726 653 PRINTS PR01047 Threonyl-tRNA synthetase signature 523 536 6.1E-52 T 22-04-2016 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 SRM_RS15470 a38b97e015be6cdb8d84a7a91d5aa726 653 PRINTS PR01047 Threonyl-tRNA synthetase signature 480 508 6.1E-52 T 22-04-2016 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 SRM_RS15470 a38b97e015be6cdb8d84a7a91d5aa726 653 PRINTS PR01047 Threonyl-tRNA synthetase signature 374 397 6.1E-52 T 22-04-2016 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 SRM_RS15470 a38b97e015be6cdb8d84a7a91d5aa726 653 SUPERFAMILY SSF55186 67 244 1.22E-56 T 22-04-2016 IPR018163 Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain GO:0000166 SRM_RS15470 a38b97e015be6cdb8d84a7a91d5aa726 653 SUPERFAMILY SSF52954 546 643 1.09E-31 T 22-04-2016 IPR004154 Anticodon-binding SRM_RS15470 a38b97e015be6cdb8d84a7a91d5aa726 653 SUPERFAMILY SSF55681 246 542 8.22E-93 T 22-04-2016 SRM_RS15470 a38b97e015be6cdb8d84a7a91d5aa726 653 Pfam PF00587 tRNA synthetase class II core domain (G, H, P, S and T) 333 544 7.6E-44 T 22-04-2016 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 SRM_RS15470 a38b97e015be6cdb8d84a7a91d5aa726 653 Gene3D G3DSA:3.30.54.20 137 190 4.1E-21 T 22-04-2016 SRM_RS15470 a38b97e015be6cdb8d84a7a91d5aa726 653 Gene3D G3DSA:3.30.980.10 191 227 3.0E-36 T 22-04-2016 SRM_RS15470 a38b97e015be6cdb8d84a7a91d5aa726 653 Gene3D G3DSA:3.30.980.10 69 134 3.0E-36 T 22-04-2016 SRM_RS15470 a38b97e015be6cdb8d84a7a91d5aa726 653 Gene3D G3DSA:3.10.20.30 6 68 5.7E-23 T 22-04-2016 IPR012675 Beta-grasp domain SRM_RS15470 a38b97e015be6cdb8d84a7a91d5aa726 653 PANTHER PTHR11451:SF5 1 643 2.4E-292 T 22-04-2016 SRM_RS15470 a38b97e015be6cdb8d84a7a91d5aa726 653 Gene3D G3DSA:3.30.930.10 245 545 1.5E-108 T 22-04-2016 SRM_RS05205 c2c9da6e3822f249868e158e267aecd2 350 Pfam PF13349 Putative adhesin 75 347 1.6E-8 T 22-04-2016 IPR025164 Putative adhesin SRM_RS02745 8f9d902e90592eacebd4e4c924c6b40c 1061 Pfam PF13715 CarboxypepD_reg-like domain 41 123 2.4E-17 T 22-04-2016 SRM_RS02745 8f9d902e90592eacebd4e4c924c6b40c 1061 SUPERFAMILY SSF56935 969 1061 3.89E-81 T 22-04-2016 SRM_RS02745 8f9d902e90592eacebd4e4c924c6b40c 1061 SUPERFAMILY SSF56935 852 904 3.89E-81 T 22-04-2016 SRM_RS02745 8f9d902e90592eacebd4e4c924c6b40c 1061 SUPERFAMILY SSF56935 346 433 3.89E-81 T 22-04-2016 SRM_RS02745 8f9d902e90592eacebd4e4c924c6b40c 1061 SUPERFAMILY SSF56935 117 278 3.89E-81 T 22-04-2016 SRM_RS02745 8f9d902e90592eacebd4e4c924c6b40c 1061 SUPERFAMILY SSF56935 472 803 3.89E-81 T 22-04-2016 SRM_RS02745 8f9d902e90592eacebd4e4c924c6b40c 1061 TIGRFAM TIGR04056 OMP_RagA_SusC: TonB-linked outer membrane protein, SusC/RagA family 40 1061 3.2E-182 T 22-04-2016 IPR023996 TonB-dependent outer membrane protein, SusC/RagA UniPathway: UPA00153 SRM_RS02745 8f9d902e90592eacebd4e4c924c6b40c 1061 Gene3D G3DSA:2.170.130.10 126 256 1.4E-20 T 22-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 SRM_RS02745 8f9d902e90592eacebd4e4c924c6b40c 1061 Gene3D G3DSA:2.40.170.20 841 914 8.1E-40 T 22-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 SRM_RS02745 8f9d902e90592eacebd4e4c924c6b40c 1061 Gene3D G3DSA:2.40.170.20 257 288 8.1E-40 T 22-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 SRM_RS02745 8f9d902e90592eacebd4e4c924c6b40c 1061 Gene3D G3DSA:2.40.170.20 979 1061 8.1E-40 T 22-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 SRM_RS02745 8f9d902e90592eacebd4e4c924c6b40c 1061 Gene3D G3DSA:2.40.170.20 355 803 8.1E-40 T 22-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 SRM_RS02745 8f9d902e90592eacebd4e4c924c6b40c 1061 PANTHER PTHR11532 222 420 9.1E-179 T 22-04-2016 SRM_RS02745 8f9d902e90592eacebd4e4c924c6b40c 1061 PANTHER PTHR11532 595 1059 9.1E-179 T 22-04-2016 SRM_RS02745 8f9d902e90592eacebd4e4c924c6b40c 1061 PANTHER PTHR11532 442 562 9.1E-179 T 22-04-2016 SRM_RS02745 8f9d902e90592eacebd4e4c924c6b40c 1061 PANTHER PTHR11532 32 206 9.1E-179 T 22-04-2016 SRM_RS02745 8f9d902e90592eacebd4e4c924c6b40c 1061 Gene3D G3DSA:2.60.40.1120 41 125 3.6E-11 T 22-04-2016 IPR014766 Carboxypeptidase, regulatory domain SRM_RS02745 8f9d902e90592eacebd4e4c924c6b40c 1061 SUPERFAMILY SSF49464 39 121 7.19E-15 T 22-04-2016 IPR008969 Carboxypeptidase-like, regulatory domain SRM_RS02745 8f9d902e90592eacebd4e4c924c6b40c 1061 Pfam PF07715 TonB-dependent Receptor Plug Domain 132 255 3.5E-20 T 22-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 SRM_RS02745 8f9d902e90592eacebd4e4c924c6b40c 1061 PANTHER PTHR11532:SF51 222 420 9.1E-179 T 22-04-2016 SRM_RS02745 8f9d902e90592eacebd4e4c924c6b40c 1061 PANTHER PTHR11532:SF51 595 1059 9.1E-179 T 22-04-2016 SRM_RS02745 8f9d902e90592eacebd4e4c924c6b40c 1061 PANTHER PTHR11532:SF51 442 562 9.1E-179 T 22-04-2016 SRM_RS02745 8f9d902e90592eacebd4e4c924c6b40c 1061 PANTHER PTHR11532:SF51 32 206 9.1E-179 T 22-04-2016 SRM_RS09275 595d4a5801c4abe9c5594ec8e213c827 665 SMART SM00028 192 225 3.3 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 SRM_RS09275 595d4a5801c4abe9c5594ec8e213c827 665 SMART SM00028 619 652 13.0 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 SRM_RS09275 595d4a5801c4abe9c5594ec8e213c827 665 SMART SM00028 226 259 130.0 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 SRM_RS09275 595d4a5801c4abe9c5594ec8e213c827 665 SMART SM00028 124 157 0.016 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 SRM_RS09275 595d4a5801c4abe9c5594ec8e213c827 665 SMART SM00028 408 441 430.0 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 SRM_RS09275 595d4a5801c4abe9c5594ec8e213c827 665 SMART SM00028 585 618 77.0 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 SRM_RS09275 595d4a5801c4abe9c5594ec8e213c827 665 SMART SM00028 158 191 460.0 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 SRM_RS09275 595d4a5801c4abe9c5594ec8e213c827 665 SMART SM00028 516 549 1.2 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 SRM_RS09275 595d4a5801c4abe9c5594ec8e213c827 665 Gene3D G3DSA:1.25.40.10 124 369 4.8E-28 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 SRM_RS09275 595d4a5801c4abe9c5594ec8e213c827 665 SUPERFAMILY SSF48452 389 659 3.98E-26 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 SRM_RS09275 595d4a5801c4abe9c5594ec8e213c827 665 SUPERFAMILY SSF48452 124 317 2.18E-23 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 SRM_RS09275 595d4a5801c4abe9c5594ec8e213c827 665 Gene3D G3DSA:1.25.40.10 389 652 4.5E-34 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 SRM_RS09275 595d4a5801c4abe9c5594ec8e213c827 665 Pfam PF13432 Tetratricopeptide repeat 203 256 3.6E-6 T 22-04-2016 SRM_RS09275 595d4a5801c4abe9c5594ec8e213c827 665 Pfam PF13432 Tetratricopeptide repeat 130 189 2.5E-6 T 22-04-2016 SRM_RS09275 595d4a5801c4abe9c5594ec8e213c827 665 Pfam PF13432 Tetratricopeptide repeat 566 615 1.4E-5 T 22-04-2016 SRM_RS09275 595d4a5801c4abe9c5594ec8e213c827 665 PANTHER PTHR23083 405 651 4.3E-51 T 22-04-2016 SRM_RS09275 595d4a5801c4abe9c5594ec8e213c827 665 PANTHER PTHR23083 127 328 4.3E-51 T 22-04-2016 SRM_RS13065 36d9d601dd711e95b843fdf4e09a1bc3 278 Gene3D G3DSA:3.40.50.2300 5 128 5.5E-34 T 22-04-2016 SRM_RS13065 36d9d601dd711e95b843fdf4e09a1bc3 278 Pfam PF04397 LytTr DNA-binding domain 172 265 5.2E-22 T 22-04-2016 IPR007492 LytTR DNA-binding domain GO:0003677 SRM_RS13065 36d9d601dd711e95b843fdf4e09a1bc3 278 SMART SM00850 169 266 2.6E-30 T 22-04-2016 IPR007492 LytTR DNA-binding domain GO:0003677 SRM_RS13065 36d9d601dd711e95b843fdf4e09a1bc3 278 Gene3D G3DSA:2.40.50.40 161 228 6.5E-16 T 22-04-2016 SRM_RS13065 36d9d601dd711e95b843fdf4e09a1bc3 278 Gene3D G3DSA:2.20.25.10 241 267 3.5E-4 T 22-04-2016 SRM_RS13065 36d9d601dd711e95b843fdf4e09a1bc3 278 Pfam PF00072 Response regulator receiver domain 11 118 2.3E-26 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SRM_RS13065 36d9d601dd711e95b843fdf4e09a1bc3 278 SMART SM00448 8 118 6.2E-31 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SRM_RS13065 36d9d601dd711e95b843fdf4e09a1bc3 278 PANTHER PTHR26402:SF524 8 274 6.8E-34 T 22-04-2016 SRM_RS13065 36d9d601dd711e95b843fdf4e09a1bc3 278 SUPERFAMILY SSF52172 8 131 1.28E-33 T 22-04-2016 IPR011006 CheY-like superfamily SRM_RS13065 36d9d601dd711e95b843fdf4e09a1bc3 278 PANTHER PTHR26402 8 274 6.8E-34 T 22-04-2016 SRM_RS14905 2a0535e1e93658a719d8595588ff25d4 208 Gene3D G3DSA:3.40.50.2020 44 200 3.0E-38 T 22-04-2016 IPR029057 Phosphoribosyltransferase-like SRM_RS14905 2a0535e1e93658a719d8595588ff25d4 208 PANTHER PTHR11608 38 208 3.0E-56 T 22-04-2016 SRM_RS14905 2a0535e1e93658a719d8595588ff25d4 208 Hamap MF_01219 Bifunctional protein PyrR [pyrR]. 41 208 27.37 T 22-04-2016 IPR023050 Bifunctional protein PyrR KEGG: 00240+2.4.2.9|MetaCyc: PWY-7183 SRM_RS14905 2a0535e1e93658a719d8595588ff25d4 208 SUPERFAMILY SSF53271 44 196 2.23E-34 T 22-04-2016 IPR029057 Phosphoribosyltransferase-like SRM_RS14905 2a0535e1e93658a719d8595588ff25d4 208 Pfam PF00156 Phosphoribosyl transferase domain 50 190 6.6E-16 T 22-04-2016 IPR000836 Phosphoribosyltransferase domain GO:0009116 SRM_RS14590 a9d4f9a39a20392f4726369f48d2e3d9 282 Gene3D G3DSA:3.40.50.300 3 281 2.4E-38 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SRM_RS14590 a9d4f9a39a20392f4726369f48d2e3d9 282 Pfam PF00685 Sulfotransferase domain 3 279 3.2E-21 T 22-04-2016 IPR000863 Sulfotransferase domain GO:0008146 SRM_RS14590 a9d4f9a39a20392f4726369f48d2e3d9 282 SUPERFAMILY SSF52540 79 282 1.82E-39 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SRM_RS14590 a9d4f9a39a20392f4726369f48d2e3d9 282 SUPERFAMILY SSF52540 3 46 1.82E-39 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SRM_RS07220 abf5d506a890304a901c6e04aa8b8cc5 313 SUPERFAMILY SSF50182 120 176 5.23E-13 T 22-04-2016 IPR010920 LSM domain SRM_RS07220 abf5d506a890304a901c6e04aa8b8cc5 313 PANTHER PTHR30460 28 309 3.7E-76 T 22-04-2016 SRM_RS07220 abf5d506a890304a901c6e04aa8b8cc5 313 Gene3D G3DSA:2.30.30.60 137 176 1.2E-11 T 22-04-2016 SRM_RS07220 abf5d506a890304a901c6e04aa8b8cc5 313 SUPERFAMILY SSF82861 36 118 2.88E-13 T 22-04-2016 IPR011014 Mechanosensitive ion channel MscS, transmembrane-2 GO:0016020 SRM_RS07220 abf5d506a890304a901c6e04aa8b8cc5 313 SUPERFAMILY SSF82689 185 285 2.88E-23 T 22-04-2016 IPR011066 Mechanosensitive ion channel MscS, C-terminal GO:0016020 SRM_RS07220 abf5d506a890304a901c6e04aa8b8cc5 313 Pfam PF00924 Mechanosensitive ion channel 81 276 5.0E-45 T 22-04-2016 IPR006685 Mechanosensitive ion channel MscS GO:0016020|GO:0055085 SRM_RS07220 abf5d506a890304a901c6e04aa8b8cc5 313 Gene3D G3DSA:3.30.70.100 188 274 3.3E-14 T 22-04-2016 SRM_RS06230 62dd4ce48f40ed5726c133b12c43f80c 456 Gene3D G3DSA:1.20.272.10 253 351 4.8E-43 T 22-04-2016 SRM_RS06230 62dd4ce48f40ed5726c133b12c43f80c 456 Pfam PF12002 MgsA AAA+ ATPase C terminal 272 435 3.8E-63 T 22-04-2016 IPR021886 MgsA AAA+ ATPase C-terminal SRM_RS06230 62dd4ce48f40ed5726c133b12c43f80c 456 PANTHER PTHR13779:SF32 6 444 4.9E-207 T 22-04-2016 SRM_RS06230 62dd4ce48f40ed5726c133b12c43f80c 456 PANTHER PTHR13779 6 444 4.9E-207 T 22-04-2016 SRM_RS06230 62dd4ce48f40ed5726c133b12c43f80c 456 Pfam PF05496 Holliday junction DNA helicase ruvB N-terminus 12 141 3.1E-18 T 22-04-2016 IPR008824 Holliday junction DNA helicase ruvB, N-terminal GO:0006281|GO:0006310|GO:0009378 SRM_RS06230 62dd4ce48f40ed5726c133b12c43f80c 456 SUPERFAMILY SSF48019 256 435 8.93E-65 T 22-04-2016 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal GO:0003677|GO:0006260 Reactome: REACT_152|Reactome: REACT_1538|Reactome: REACT_216|Reactome: REACT_22172|Reactome: REACT_383 SRM_RS06230 62dd4ce48f40ed5726c133b12c43f80c 456 Gene3D G3DSA:1.10.8.60 158 225 7.2E-8 T 22-04-2016 SRM_RS06230 62dd4ce48f40ed5726c133b12c43f80c 456 Gene3D G3DSA:3.40.50.300 11 157 2.3E-34 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SRM_RS06230 62dd4ce48f40ed5726c133b12c43f80c 456 SUPERFAMILY SSF52540 13 243 5.71E-49 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SRM_RS06230 62dd4ce48f40ed5726c133b12c43f80c 456 Gene3D G3DSA:1.10.3710.10 354 440 7.1E-26 T 22-04-2016 SRM_RS06230 62dd4ce48f40ed5726c133b12c43f80c 456 Pfam PF16193 AAA C-terminal domain 192 271 7.2E-26 T 22-04-2016 IPR032423 AAA ATPase, C-terminal domain SRM_RS06230 62dd4ce48f40ed5726c133b12c43f80c 456 SMART SM00382 52 169 4.6E-14 T 22-04-2016 IPR003593 AAA+ ATPase domain SRM_RS07190 9e78c5455571307f1e53c064cbed3511 567 Gene3D G3DSA:3.30.1150.10 377 459 1.1E-12 T 22-04-2016 SRM_RS07190 9e78c5455571307f1e53c064cbed3511 567 SUPERFAMILY SSF74653 379 455 3.4E-20 T 22-04-2016 SRM_RS07190 9e78c5455571307f1e53c064cbed3511 567 Pfam PF03544 Gram-negative bacterial TonB protein C-terminal 382 457 4.7E-22 T 22-04-2016 IPR006260 TonB, C-terminal GO:0006810 SRM_RS07190 9e78c5455571307f1e53c064cbed3511 567 PANTHER PTHR33446:SF2 335 468 2.1E-27 T 22-04-2016 SRM_RS07190 9e78c5455571307f1e53c064cbed3511 567 Pfam PF05569 BlaR1 peptidase M56 112 301 1.4E-21 T 22-04-2016 IPR008756 Peptidase M56 SRM_RS07190 9e78c5455571307f1e53c064cbed3511 567 TIGRFAM TIGR01352 tonB_Cterm: TonB family C-terminal domain 383 457 4.1E-16 T 22-04-2016 IPR006260 TonB, C-terminal GO:0006810 SRM_RS07190 9e78c5455571307f1e53c064cbed3511 567 PANTHER PTHR33446 335 468 2.1E-27 T 22-04-2016 SRM_RS12165 83d090170eea15a9b5eaf8c245536bec 412 Hamap MF_01033 3-isopropylmalate dehydrogenase [leuB]. 54 401 47.51 T 22-04-2016 IPR004429 Isopropylmalate dehydrogenase GO:0003862|GO:0005737|GO:0009098|GO:0055114 KEGG: 00290+1.1.1.85|KEGG: 00660+1.1.1.85|MetaCyc: PWY-7396|UniPathway: UPA00048 SRM_RS12165 83d090170eea15a9b5eaf8c245536bec 412 PANTHER PTHR11835:SF35 2 409 1.2E-177 T 22-04-2016 SRM_RS12165 83d090170eea15a9b5eaf8c245536bec 412 Gene3D G3DSA:3.40.718.10 49 399 1.7E-123 T 22-04-2016 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 SRM_RS12165 83d090170eea15a9b5eaf8c245536bec 412 SUPERFAMILY SSF53659 51 399 9.36E-118 T 22-04-2016 SRM_RS12165 83d090170eea15a9b5eaf8c245536bec 412 PANTHER PTHR11835 2 409 1.2E-177 T 22-04-2016 IPR001804 Isocitrate and isopropylmalate dehydrogenases family GO:0000287|GO:0016616|GO:0051287|GO:0055114 Reactome: REACT_1046 SRM_RS12165 83d090170eea15a9b5eaf8c245536bec 412 SMART SM01329 55 397 1.5E-183 T 22-04-2016 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 SRM_RS12165 83d090170eea15a9b5eaf8c245536bec 412 ProSitePatterns PS00470 Isocitrate and isopropylmalate dehydrogenases signature. 290 309 - T 22-04-2016 IPR019818 Isocitrate/isopropylmalate dehydrogenase, conserved site GO:0000287|GO:0016616|GO:0051287|GO:0055114 Reactome: REACT_1046 SRM_RS12165 83d090170eea15a9b5eaf8c245536bec 412 TIGRFAM TIGR00169 leuB: 3-isopropylmalate dehydrogenase 56 395 9.0E-138 T 22-04-2016 IPR004429 Isopropylmalate dehydrogenase GO:0003862|GO:0005737|GO:0009098|GO:0055114 KEGG: 00290+1.1.1.85|KEGG: 00660+1.1.1.85|MetaCyc: PWY-7396|UniPathway: UPA00048 SRM_RS12165 83d090170eea15a9b5eaf8c245536bec 412 Pfam PF00180 Isocitrate/isopropylmalate dehydrogenase 56 397 1.9E-126 T 22-04-2016 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 SRM_RS01535 e83ad2054753048fd037e08909b3b62f 1668 Gene3D G3DSA:3.30.450.20 968 1107 6.7E-28 T 22-04-2016 SRM_RS01535 e83ad2054753048fd037e08909b3b62f 1668 SUPERFAMILY SSF55785 715 839 1.1E-24 T 22-04-2016 IPR000014 PAS domain SRM_RS01535 e83ad2054753048fd037e08909b3b62f 1668 Gene3D G3DSA:3.30.450.20 370 455 1.1E-30 T 22-04-2016 SRM_RS01535 e83ad2054753048fd037e08909b3b62f 1668 SUPERFAMILY SSF55785 487 597 2.79E-14 T 22-04-2016 IPR000014 PAS domain SRM_RS01535 e83ad2054753048fd037e08909b3b62f 1668 Pfam PF00512 His Kinase A (phospho-acceptor) domain 1423 1501 2.1E-14 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SRM_RS01535 e83ad2054753048fd037e08909b3b62f 1668 SUPERFAMILY SSF55785 608 721 4.03E-23 T 22-04-2016 IPR000014 PAS domain SRM_RS01535 e83ad2054753048fd037e08909b3b62f 1668 PANTHER PTHR24423 924 963 2.8E-118 T 22-04-2016 SRM_RS01535 e83ad2054753048fd037e08909b3b62f 1668 PANTHER PTHR24423 1401 1663 2.8E-118 T 22-04-2016 SRM_RS01535 e83ad2054753048fd037e08909b3b62f 1668 PANTHER PTHR24423 572 800 2.8E-118 T 22-04-2016 SRM_RS01535 e83ad2054753048fd037e08909b3b62f 1668 Gene3D G3DSA:3.30.450.20 1110 1236 2.9E-14 T 22-04-2016 SRM_RS01535 e83ad2054753048fd037e08909b3b62f 1668 SMART SM00387 1547 1660 4.4E-34 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SRM_RS01535 e83ad2054753048fd037e08909b3b62f 1668 Gene3D G3DSA:3.30.450.20 839 963 5.1E-21 T 22-04-2016 SRM_RS01535 e83ad2054753048fd037e08909b3b62f 1668 SMART SM00388 1422 1501 4.6E-16 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SRM_RS01535 e83ad2054753048fd037e08909b3b62f 1668 Gene3D G3DSA:3.30.565.10 1502 1661 1.0E-40 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SRM_RS01535 e83ad2054753048fd037e08909b3b62f 1668 SUPERFAMILY SSF55874 1492 1659 1.24E-39 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SRM_RS01535 e83ad2054753048fd037e08909b3b62f 1668 SUPERFAMILY SSF55785 838 963 2.58E-20 T 22-04-2016 IPR000014 PAS domain SRM_RS01535 e83ad2054753048fd037e08909b3b62f 1668 Gene3D G3DSA:3.30.450.20 584 741 1.2E-44 T 22-04-2016 SRM_RS01535 e83ad2054753048fd037e08909b3b62f 1668 Gene3D G3DSA:3.30.450.20 456 583 1.8E-21 T 22-04-2016 SRM_RS01535 e83ad2054753048fd037e08909b3b62f 1668 SUPERFAMILY SSF55785 1106 1234 2.27E-11 T 22-04-2016 IPR000014 PAS domain SRM_RS01535 e83ad2054753048fd037e08909b3b62f 1668 Pfam PF08447 PAS fold 625 712 3.9E-22 T 22-04-2016 IPR013655 PAS fold-3 GO:0005515 SRM_RS01535 e83ad2054753048fd037e08909b3b62f 1668 Pfam PF08447 PAS fold 1002 1075 4.4E-14 T 22-04-2016 IPR013655 PAS fold-3 GO:0005515 SRM_RS01535 e83ad2054753048fd037e08909b3b62f 1668 Pfam PF08447 PAS fold 499 581 6.1E-9 T 22-04-2016 IPR013655 PAS fold-3 GO:0005515 SRM_RS01535 e83ad2054753048fd037e08909b3b62f 1668 PRINTS PR00344 Bacterial sensor protein C-terminal signature 1620 1638 1.3E-10 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SRM_RS01535 e83ad2054753048fd037e08909b3b62f 1668 PRINTS PR00344 Bacterial sensor protein C-terminal signature 1644 1657 1.3E-10 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SRM_RS01535 e83ad2054753048fd037e08909b3b62f 1668 PRINTS PR00344 Bacterial sensor protein C-terminal signature 1603 1613 1.3E-10 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SRM_RS01535 e83ad2054753048fd037e08909b3b62f 1668 PRINTS PR00344 Bacterial sensor protein C-terminal signature 1585 1599 1.3E-10 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SRM_RS01535 e83ad2054753048fd037e08909b3b62f 1668 SUPERFAMILY SSF55781 1233 1393 1.37E-7 T 22-04-2016 IPR029016 GAF domain-like SRM_RS01535 e83ad2054753048fd037e08909b3b62f 1668 SUPERFAMILY SSF55785 962 1075 3.84E-17 T 22-04-2016 IPR000014 PAS domain SRM_RS01535 e83ad2054753048fd037e08909b3b62f 1668 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 1144 1241 5.5E-10 T 22-04-2016 IPR000014 PAS domain SRM_RS01535 e83ad2054753048fd037e08909b3b62f 1668 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 520 595 5.4E-9 T 22-04-2016 IPR000014 PAS domain SRM_RS01535 e83ad2054753048fd037e08909b3b62f 1668 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 370 470 5.1E-19 T 22-04-2016 IPR000014 PAS domain SRM_RS01535 e83ad2054753048fd037e08909b3b62f 1668 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 727 848 2.3E-22 T 22-04-2016 IPR000014 PAS domain SRM_RS01535 e83ad2054753048fd037e08909b3b62f 1668 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 857 972 9.6E-15 T 22-04-2016 IPR000014 PAS domain SRM_RS01535 e83ad2054753048fd037e08909b3b62f 1668 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 597 725 7.5E-15 T 22-04-2016 IPR000014 PAS domain SRM_RS01535 e83ad2054753048fd037e08909b3b62f 1668 Pfam PF13426 PAS domain 742 840 2.4E-10 T 22-04-2016 IPR000014 PAS domain SRM_RS01535 e83ad2054753048fd037e08909b3b62f 1668 Pfam PF13426 PAS domain 367 462 3.0E-19 T 22-04-2016 IPR000014 PAS domain SRM_RS01535 e83ad2054753048fd037e08909b3b62f 1668 Gene3D G3DSA:3.30.450.20 742 838 7.8E-20 T 22-04-2016 SRM_RS01535 e83ad2054753048fd037e08909b3b62f 1668 SMART SM00091 730 796 6.4E-10 T 22-04-2016 IPR000014 PAS domain SRM_RS01535 e83ad2054753048fd037e08909b3b62f 1668 SMART SM00091 343 415 0.012 T 22-04-2016 IPR000014 PAS domain SRM_RS01535 e83ad2054753048fd037e08909b3b62f 1668 SMART SM00091 853 919 7.7E-6 T 22-04-2016 IPR000014 PAS domain SRM_RS01535 e83ad2054753048fd037e08909b3b62f 1668 SMART SM00091 231 299 100.0 T 22-04-2016 IPR000014 PAS domain SRM_RS01535 e83ad2054753048fd037e08909b3b62f 1668 SMART SM00091 1117 1190 7.2 T 22-04-2016 IPR000014 PAS domain SRM_RS01535 e83ad2054753048fd037e08909b3b62f 1668 SMART SM00091 600 668 8.4E-6 T 22-04-2016 IPR000014 PAS domain SRM_RS01535 e83ad2054753048fd037e08909b3b62f 1668 SMART SM00091 977 1044 13.0 T 22-04-2016 IPR000014 PAS domain SRM_RS01535 e83ad2054753048fd037e08909b3b62f 1668 SUPERFAMILY SSF47384 1409 1502 6.28E-16 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SRM_RS01535 e83ad2054753048fd037e08909b3b62f 1668 SMART SM00086 546 588 5.1 T 22-04-2016 IPR001610 PAC motif SRM_RS01535 e83ad2054753048fd037e08909b3b62f 1668 SMART SM00086 924 965 19.0 T 22-04-2016 IPR001610 PAC motif SRM_RS01535 e83ad2054753048fd037e08909b3b62f 1668 SMART SM00086 675 718 1.7E-4 T 22-04-2016 IPR001610 PAC motif SRM_RS01535 e83ad2054753048fd037e08909b3b62f 1668 SMART SM00086 1194 1236 270.0 T 22-04-2016 IPR001610 PAC motif SRM_RS01535 e83ad2054753048fd037e08909b3b62f 1668 SMART SM00086 1050 1109 0.5 T 22-04-2016 IPR001610 PAC motif SRM_RS01535 e83ad2054753048fd037e08909b3b62f 1668 SMART SM00086 801 841 3.5 T 22-04-2016 IPR001610 PAC motif SRM_RS01535 e83ad2054753048fd037e08909b3b62f 1668 SMART SM00086 421 463 8.1E-10 T 22-04-2016 IPR001610 PAC motif SRM_RS01535 e83ad2054753048fd037e08909b3b62f 1668 Pfam PF08448 PAS fold 1144 1238 6.7E-11 T 22-04-2016 IPR013656 PAS fold-4 SRM_RS01535 e83ad2054753048fd037e08909b3b62f 1668 Pfam PF08448 PAS fold 859 967 5.7E-9 T 22-04-2016 IPR013656 PAS fold-4 SRM_RS01535 e83ad2054753048fd037e08909b3b62f 1668 SUPERFAMILY SSF55785 368 462 3.7E-27 T 22-04-2016 IPR000014 PAS domain SRM_RS01535 e83ad2054753048fd037e08909b3b62f 1668 Pfam PF16927 N-terminal 7TM region of histidine kinase 25 228 1.3E-13 T 22-04-2016 IPR031621 Histidine kinase, N-terminal 7TM region SRM_RS01535 e83ad2054753048fd037e08909b3b62f 1668 Gene3D G3DSA:3.30.450.40 1237 1395 3.2E-6 T 22-04-2016 IPR029016 GAF domain-like SRM_RS01535 e83ad2054753048fd037e08909b3b62f 1668 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 1548 1659 1.4E-22 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SRM_RS01535 e83ad2054753048fd037e08909b3b62f 1668 Gene3D G3DSA:1.10.287.130 1415 1497 3.8E-15 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SRM_RS09480 96a540c1dbfa20df2700de81dc00ebb7 528 Gene3D G3DSA:3.40.140.20 372 518 5.9E-53 T 22-04-2016 IPR024051 AICAR transformylase domain KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|UniPathway: UPA00074|UniPathway: UPA00074 SRM_RS09480 96a540c1dbfa20df2700de81dc00ebb7 528 SUPERFAMILY SSF52335 9 200 6.8E-63 T 22-04-2016 IPR011607 Methylglyoxal synthase-like domain SRM_RS09480 96a540c1dbfa20df2700de81dc00ebb7 528 Pfam PF02142 MGS-like domain 21 136 1.1E-19 T 22-04-2016 IPR011607 Methylglyoxal synthase-like domain SRM_RS09480 96a540c1dbfa20df2700de81dc00ebb7 528 Gene3D G3DSA:3.40.50.1380 8 193 1.1E-74 T 22-04-2016 IPR011607 Methylglyoxal synthase-like domain SRM_RS09480 96a540c1dbfa20df2700de81dc00ebb7 528 SMART SM00798 141 460 1.1E-150 T 22-04-2016 IPR002695 AICARFT/IMPCHase bienzyme GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|UniPathway: UPA00074|UniPathway: UPA00074 SRM_RS09480 96a540c1dbfa20df2700de81dc00ebb7 528 PIRSF PIRSF000414 4 528 3.7E-188 T 22-04-2016 IPR002695 AICARFT/IMPCHase bienzyme GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|UniPathway: UPA00074|UniPathway: UPA00074 SRM_RS09480 96a540c1dbfa20df2700de81dc00ebb7 528 Hamap MF_00139 Bifunctional purine biosynthesis protein PurH [purH]. 9 528 40.408 T 22-04-2016 IPR002695 AICARFT/IMPCHase bienzyme GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|UniPathway: UPA00074|UniPathway: UPA00074 SRM_RS09480 96a540c1dbfa20df2700de81dc00ebb7 528 TIGRFAM TIGR00355 purH: phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase 10 528 5.4E-177 T 22-04-2016 IPR002695 AICARFT/IMPCHase bienzyme GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|UniPathway: UPA00074|UniPathway: UPA00074 SRM_RS09480 96a540c1dbfa20df2700de81dc00ebb7 528 Gene3D G3DSA:3.40.140.20 248 364 5.8E-37 T 22-04-2016 IPR024051 AICAR transformylase domain KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|UniPathway: UPA00074|UniPathway: UPA00074 SRM_RS09480 96a540c1dbfa20df2700de81dc00ebb7 528 Pfam PF01808 AICARFT/IMPCHase bienzyme 141 458 5.5E-100 T 22-04-2016 IPR002695 AICARFT/IMPCHase bienzyme GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|UniPathway: UPA00074|UniPathway: UPA00074 SRM_RS09480 96a540c1dbfa20df2700de81dc00ebb7 528 PANTHER PTHR11692 7 528 1.1E-252 T 22-04-2016 IPR002695 AICARFT/IMPCHase bienzyme GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|UniPathway: UPA00074|UniPathway: UPA00074 SRM_RS09480 96a540c1dbfa20df2700de81dc00ebb7 528 SMART SM00851 21 136 1.3E-45 T 22-04-2016 IPR011607 Methylglyoxal synthase-like domain SRM_RS09480 96a540c1dbfa20df2700de81dc00ebb7 528 PANTHER PTHR11692:SF2 7 528 1.1E-252 T 22-04-2016 SRM_RS09480 96a540c1dbfa20df2700de81dc00ebb7 528 SUPERFAMILY SSF53927 222 528 4.31E-110 T 22-04-2016 IPR016193 Cytidine deaminase-like GO:0003824 SRM_RS02380 60e8c6db56df474249e0c34f5a3947a2 230 PANTHER PTHR24220 8 198 4.2E-39 T 22-04-2016 SRM_RS02380 60e8c6db56df474249e0c34f5a3947a2 230 SMART SM00382 31 204 7.6E-7 T 22-04-2016 IPR003593 AAA+ ATPase domain SRM_RS02380 60e8c6db56df474249e0c34f5a3947a2 230 SUPERFAMILY SSF52540 6 206 2.15E-39 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SRM_RS02380 60e8c6db56df474249e0c34f5a3947a2 230 Pfam PF00005 ABC transporter 22 153 5.6E-23 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 SRM_RS02380 60e8c6db56df474249e0c34f5a3947a2 230 ProSitePatterns PS00211 ABC transporters family signature. 126 140 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 SRM_RS02380 60e8c6db56df474249e0c34f5a3947a2 230 Gene3D G3DSA:3.40.50.300 3 204 5.9E-37 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SRM_RS15625 d75d880788a85fbb48f12c1618d5e698 219 PANTHER PTHR38664 28 161 1.9E-13 T 22-04-2016 SRM_RS15625 d75d880788a85fbb48f12c1618d5e698 219 Pfam PF05597 Poly(hydroxyalcanoate) granule associated protein (phasin) 20 139 5.0E-35 T 22-04-2016 IPR008769 Poly granule associated SRM_RS15625 d75d880788a85fbb48f12c1618d5e698 219 Pfam PF09954 Uncharacterized protein conserved in bacteria (DUF2188) 154 214 3.2E-17 T 22-04-2016 IPR018691 Protein of unknown function DUF2188 SRM_RS15625 d75d880788a85fbb48f12c1618d5e698 219 ProDom PD054650 YYCD 152 214 6.0E-4 T 22-04-2016 IPR020086 Uncharacterised protein family YycD SRM_RS15625 d75d880788a85fbb48f12c1618d5e698 219 PANTHER PTHR38664:SF1 28 161 1.9E-13 T 22-04-2016 SRM_RS03205 8b90192371b0a0d858e21925d0c83451 325 SMART SM01400 5 125 4.3E-52 T 22-04-2016 SRM_RS03205 8b90192371b0a0d858e21925d0c83451 325 Pfam PF14572 Phosphoribosyl synthetase-associated domain 216 322 2.9E-17 T 22-04-2016 IPR005946 Ribose-phosphate diphosphokinase GO:0000287|GO:0004749|GO:0009165 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1|UniPathway: UPA00087 SRM_RS03205 8b90192371b0a0d858e21925d0c83451 325 Pfam PF13793 N-terminal domain of ribose phosphate pyrophosphokinase 5 125 8.3E-35 T 22-04-2016 IPR029099 Ribose-phosphate pyrophosphokinase, N-terminal domain KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1|UniPathway: UPA00087 SRM_RS03205 8b90192371b0a0d858e21925d0c83451 325 Gene3D G3DSA:3.40.50.2020 3 165 1.5E-46 T 22-04-2016 IPR029057 Phosphoribosyltransferase-like SRM_RS03205 8b90192371b0a0d858e21925d0c83451 325 SUPERFAMILY SSF53271 75 310 2.67E-39 T 22-04-2016 IPR029057 Phosphoribosyltransferase-like SRM_RS03205 8b90192371b0a0d858e21925d0c83451 325 PANTHER PTHR10210:SF41 3 322 1.4E-95 T 22-04-2016 SRM_RS03205 8b90192371b0a0d858e21925d0c83451 325 TIGRFAM TIGR01251 ribP_PPkin: ribose-phosphate diphosphokinase 6 322 2.2E-82 T 22-04-2016 IPR005946 Ribose-phosphate diphosphokinase GO:0000287|GO:0004749|GO:0009165 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1|UniPathway: UPA00087 SRM_RS03205 8b90192371b0a0d858e21925d0c83451 325 PANTHER PTHR10210 3 322 1.4E-95 T 22-04-2016 SRM_RS03205 8b90192371b0a0d858e21925d0c83451 325 Gene3D G3DSA:3.40.50.2020 166 286 1.9E-36 T 22-04-2016 IPR029057 Phosphoribosyltransferase-like SRM_RS15690 60b61454c6d5e746f5b7a10a9e3b47f8 854 Gene3D G3DSA:2.60.40.1120 47 137 3.6E-12 T 22-04-2016 IPR014766 Carboxypeptidase, regulatory domain SRM_RS15690 60b61454c6d5e746f5b7a10a9e3b47f8 854 PANTHER PTHR11532 21 136 1.2E-16 T 22-04-2016 SRM_RS15690 60b61454c6d5e746f5b7a10a9e3b47f8 854 Pfam PF13715 CarboxypepD_reg-like domain 48 131 8.3E-18 T 22-04-2016 SRM_RS15690 60b61454c6d5e746f5b7a10a9e3b47f8 854 SUPERFAMILY SSF49464 47 129 9.81E-13 T 22-04-2016 IPR008969 Carboxypeptidase-like, regulatory domain SRM_RS15690 60b61454c6d5e746f5b7a10a9e3b47f8 854 PANTHER PTHR11532:SF57 21 136 1.2E-16 T 22-04-2016 SRM_RS10365 ed9df5fb638bd4cbb30744eb5def21e5 323 SUPERFAMILY SSF158682 215 315 6.54E-8 T 22-04-2016 IPR029024 TerB-like SRM_RS10365 ed9df5fb638bd4cbb30744eb5def21e5 323 Gene3D G3DSA:1.10.3680.10 216 315 8.4E-7 T 22-04-2016 IPR029024 TerB-like SRM_RS10365 ed9df5fb638bd4cbb30744eb5def21e5 323 Gene3D G3DSA:1.10.3680.10 67 177 1.6E-9 T 22-04-2016 IPR029024 TerB-like SRM_RS10365 ed9df5fb638bd4cbb30744eb5def21e5 323 SUPERFAMILY SSF158682 73 179 7.85E-12 T 22-04-2016 IPR029024 TerB-like SRM_RS10365 ed9df5fb638bd4cbb30744eb5def21e5 323 Pfam PF05099 Tellurite resistance protein TerB 207 314 1.1E-6 T 22-04-2016 IPR007791 Co-chaperone DjlA, N-terminal SRM_RS10365 ed9df5fb638bd4cbb30744eb5def21e5 323 Pfam PF05099 Tellurite resistance protein TerB 67 176 5.1E-12 T 22-04-2016 IPR007791 Co-chaperone DjlA, N-terminal SRM_RS03865 6239ec20695d6b8dc4cd2c36408ccf93 674 Hamap MF_00062 Sulfate adenylyltransferase subunit 1 [cysN]. 40 488 46.843 T 22-04-2016 IPR011779 Sulphate adenylyltransferase, large subunit GO:0006790 KEGG: 00230+2.7.7.4|KEGG: 00261+2.7.7.4|KEGG: 00450+2.7.7.4|KEGG: 00920+2.7.7.4|MetaCyc: PWY-5278|MetaCyc: PWY-5340|MetaCyc: PWY-6683|MetaCyc: PWY-6932|UniPathway: UPA00140 SRM_RS03865 6239ec20695d6b8dc4cd2c36408ccf93 674 SUPERFAMILY SSF52540 48 253 2.68E-53 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SRM_RS03865 6239ec20695d6b8dc4cd2c36408ccf93 674 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 54 231 8.1E-12 T 22-04-2016 IPR005225 Small GTP-binding protein domain GO:0005525 SRM_RS03865 6239ec20695d6b8dc4cd2c36408ccf93 674 Pfam PF00009 Elongation factor Tu GTP binding domain 48 231 3.0E-42 T 22-04-2016 SRM_RS03865 6239ec20695d6b8dc4cd2c36408ccf93 674 Gene3D G3DSA:3.40.50.300 39 253 1.9E-63 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SRM_RS03865 6239ec20695d6b8dc4cd2c36408ccf93 674 Gene3D G3DSA:2.40.30.10 262 365 2.9E-20 T 22-04-2016 SRM_RS03865 6239ec20695d6b8dc4cd2c36408ccf93 674 Gene3D G3DSA:3.40.50.300 477 674 4.1E-82 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SRM_RS03865 6239ec20695d6b8dc4cd2c36408ccf93 674 PRINTS PR00315 GTP-binding elongation factor signature 128 138 4.7E-11 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 SRM_RS03865 6239ec20695d6b8dc4cd2c36408ccf93 674 PRINTS PR00315 GTP-binding elongation factor signature 108 116 4.7E-11 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 SRM_RS03865 6239ec20695d6b8dc4cd2c36408ccf93 674 PRINTS PR00315 GTP-binding elongation factor signature 50 63 4.7E-11 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 SRM_RS03865 6239ec20695d6b8dc4cd2c36408ccf93 674 PRINTS PR00315 GTP-binding elongation factor signature 144 155 4.7E-11 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 SRM_RS03865 6239ec20695d6b8dc4cd2c36408ccf93 674 PRINTS PR00315 GTP-binding elongation factor signature 181 190 4.7E-11 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 SRM_RS03865 6239ec20695d6b8dc4cd2c36408ccf93 674 SUPERFAMILY SSF50447 262 346 3.53E-21 T 22-04-2016 IPR009000 Translation protein, beta-barrel domain SRM_RS03865 6239ec20695d6b8dc4cd2c36408ccf93 674 SUPERFAMILY SSF52540 497 671 1.4E-39 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SRM_RS03865 6239ec20695d6b8dc4cd2c36408ccf93 674 TIGRFAM TIGR00455 apsK: adenylyl-sulfate kinase 486 668 2.7E-74 T 22-04-2016 IPR002891 Adenylyl-sulfate kinase GO:0000103|GO:0004020|GO:0005524 KEGG: 00230+2.7.1.25|KEGG: 00920+2.7.1.25|MetaCyc: PWY-5340|Reactome: REACT_13433|UniPathway: UPA00140 SRM_RS03865 6239ec20695d6b8dc4cd2c36408ccf93 674 TIGRFAM TIGR02034 CysN: sulfate adenylyltransferase, large subunit 49 451 1.3E-173 T 22-04-2016 IPR011779 Sulphate adenylyltransferase, large subunit GO:0006790 KEGG: 00230+2.7.7.4|KEGG: 00261+2.7.7.4|KEGG: 00450+2.7.7.4|KEGG: 00920+2.7.7.4|MetaCyc: PWY-5278|MetaCyc: PWY-5340|MetaCyc: PWY-6683|MetaCyc: PWY-6932|UniPathway: UPA00140 SRM_RS03865 6239ec20695d6b8dc4cd2c36408ccf93 674 SUPERFAMILY SSF50465 350 452 1.77E-32 T 22-04-2016 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal SRM_RS03865 6239ec20695d6b8dc4cd2c36408ccf93 674 Hamap MF_00065 Adenylyl-sulfate kinase [cysC]. 497 672 37.941 T 22-04-2016 IPR002891 Adenylyl-sulfate kinase GO:0000103|GO:0004020|GO:0005524 KEGG: 00230+2.7.1.25|KEGG: 00920+2.7.1.25|MetaCyc: PWY-5340|Reactome: REACT_13433|UniPathway: UPA00140 SRM_RS03865 6239ec20695d6b8dc4cd2c36408ccf93 674 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 101 116 - T 22-04-2016 IPR031157 Tr-type G domain, conserved site SRM_RS03865 6239ec20695d6b8dc4cd2c36408ccf93 674 PANTHER PTHR11055 476 674 4.6E-104 T 22-04-2016 SRM_RS03865 6239ec20695d6b8dc4cd2c36408ccf93 674 Gene3D G3DSA:2.40.30.10 366 453 1.3E-6 T 22-04-2016 SRM_RS03865 6239ec20695d6b8dc4cd2c36408ccf93 674 Pfam PF01583 Adenylylsulphate kinase 500 654 1.5E-67 T 22-04-2016 SRM_RS14940 97a3ba5cb3de5d9431dd6bf38fbc0ab4 554 Gene3D G3DSA:1.25.40.10 127 340 4.4E-67 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 SRM_RS14940 97a3ba5cb3de5d9431dd6bf38fbc0ab4 554 SMART SM00386 408 440 1100.0 T 22-04-2016 IPR003107 HAT (Half-A-TPR) repeat GO:0006396 SRM_RS14940 97a3ba5cb3de5d9431dd6bf38fbc0ab4 554 SMART SM00386 476 508 59.0 T 22-04-2016 IPR003107 HAT (Half-A-TPR) repeat GO:0006396 SRM_RS14940 97a3ba5cb3de5d9431dd6bf38fbc0ab4 554 SMART SM00386 442 474 330.0 T 22-04-2016 IPR003107 HAT (Half-A-TPR) repeat GO:0006396 SRM_RS14940 97a3ba5cb3de5d9431dd6bf38fbc0ab4 554 SMART SM00386 238 270 58.0 T 22-04-2016 IPR003107 HAT (Half-A-TPR) repeat GO:0006396 SRM_RS14940 97a3ba5cb3de5d9431dd6bf38fbc0ab4 554 SMART SM00386 340 373 54.0 T 22-04-2016 IPR003107 HAT (Half-A-TPR) repeat GO:0006396 SRM_RS14940 97a3ba5cb3de5d9431dd6bf38fbc0ab4 554 SUPERFAMILY SSF48452 359 536 7.59E-33 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 SRM_RS14940 97a3ba5cb3de5d9431dd6bf38fbc0ab4 554 Pfam PF13414 TPR repeat 472 510 9.2E-8 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 SRM_RS14940 97a3ba5cb3de5d9431dd6bf38fbc0ab4 554 PANTHER PTHR23083 125 527 3.3E-104 T 22-04-2016 SRM_RS14940 97a3ba5cb3de5d9431dd6bf38fbc0ab4 554 Gene3D G3DSA:1.25.40.10 341 442 1.0E-29 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 SRM_RS14940 97a3ba5cb3de5d9431dd6bf38fbc0ab4 554 SUPERFAMILY SSF48452 131 420 7.97E-59 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 SRM_RS14940 97a3ba5cb3de5d9431dd6bf38fbc0ab4 554 Gene3D G3DSA:1.25.40.10 443 530 8.1E-25 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 SRM_RS14940 97a3ba5cb3de5d9431dd6bf38fbc0ab4 554 SMART SM00028 326 359 5.6E-6 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 SRM_RS14940 97a3ba5cb3de5d9431dd6bf38fbc0ab4 554 SMART SM00028 292 325 0.0014 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 SRM_RS14940 97a3ba5cb3de5d9431dd6bf38fbc0ab4 554 SMART SM00028 496 529 0.49 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 SRM_RS14940 97a3ba5cb3de5d9431dd6bf38fbc0ab4 554 SMART SM00028 258 291 1.5E-4 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 SRM_RS14940 97a3ba5cb3de5d9431dd6bf38fbc0ab4 554 SMART SM00028 190 223 2.1E-5 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 SRM_RS14940 97a3ba5cb3de5d9431dd6bf38fbc0ab4 554 SMART SM00028 428 461 1.0E-4 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 SRM_RS14940 97a3ba5cb3de5d9431dd6bf38fbc0ab4 554 SMART SM00028 360 393 2.3E-5 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 SRM_RS14940 97a3ba5cb3de5d9431dd6bf38fbc0ab4 554 SMART SM00028 462 495 0.0063 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 SRM_RS14940 97a3ba5cb3de5d9431dd6bf38fbc0ab4 554 SMART SM00028 394 427 0.0012 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 SRM_RS14940 97a3ba5cb3de5d9431dd6bf38fbc0ab4 554 SMART SM00028 224 257 0.0058 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 SRM_RS14940 97a3ba5cb3de5d9431dd6bf38fbc0ab4 554 SMART SM00028 156 189 1.9E-7 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 SRM_RS14940 97a3ba5cb3de5d9431dd6bf38fbc0ab4 554 SMART SM00028 122 155 110.0 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 SRM_RS14940 97a3ba5cb3de5d9431dd6bf38fbc0ab4 554 Pfam PF00515 Tetratricopeptide repeat 293 322 9.8E-7 T 22-04-2016 IPR001440 Tetratricopeptide repeat 1 GO:0005515 SRM_RS14940 97a3ba5cb3de5d9431dd6bf38fbc0ab4 554 Pfam PF13424 Tetratricopeptide repeat 325 390 4.7E-10 T 22-04-2016 SRM_RS14940 97a3ba5cb3de5d9431dd6bf38fbc0ab4 554 Pfam PF13432 Tetratricopeptide repeat 195 258 5.0E-9 T 22-04-2016 SRM_RS14940 97a3ba5cb3de5d9431dd6bf38fbc0ab4 554 Pfam PF07719 Tetratricopeptide repeat 429 461 1.7E-5 T 22-04-2016 IPR013105 Tetratricopeptide repeat 2 SRM_RS14940 97a3ba5cb3de5d9431dd6bf38fbc0ab4 554 Pfam PF13371 Tetratricopeptide repeat 130 190 2.0E-10 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 SRM_RS14940 97a3ba5cb3de5d9431dd6bf38fbc0ab4 554 Pfam PF13181 Tetratricopeptide repeat 395 426 0.029 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 SRM_RS14940 97a3ba5cb3de5d9431dd6bf38fbc0ab4 554 Pfam PF13181 Tetratricopeptide repeat 259 289 0.0018 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 SRM_RS06290 8fc3c7a11a589b133f6844bc1a65aac5 292 Pfam PF00685 Sulfotransferase domain 21 196 3.8E-17 T 22-04-2016 IPR000863 Sulfotransferase domain GO:0008146 SRM_RS06290 8fc3c7a11a589b133f6844bc1a65aac5 292 SUPERFAMILY SSF52540 18 224 7.59E-63 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SRM_RS06290 8fc3c7a11a589b133f6844bc1a65aac5 292 SUPERFAMILY SSF52540 252 291 7.59E-63 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SRM_RS06290 8fc3c7a11a589b133f6844bc1a65aac5 292 PANTHER PTHR10605 18 196 1.1E-38 T 22-04-2016 SRM_RS06290 8fc3c7a11a589b133f6844bc1a65aac5 292 PANTHER PTHR10605:SF40 18 196 1.1E-38 T 22-04-2016 SRM_RS06290 8fc3c7a11a589b133f6844bc1a65aac5 292 Gene3D G3DSA:3.40.50.300 16 290 3.1E-68 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SRM_RS08230 69c459164a4fb3324c666a93ad2a862d 391 Pfam PF09376 NurA domain 80 354 9.3E-19 T 22-04-2016 IPR018977 NurA domain SRM_RS08230 69c459164a4fb3324c666a93ad2a862d 391 SMART SM00933 79 354 4.2E-45 T 22-04-2016 IPR018977 NurA domain SRM_RS05490 987adeeab305cca13cbf0254afefef08 663 Hamap MF_02124 Alpha-1,4-glucan:maltose-1-phosphate maltosyltransferase [glgE]. 4 646 45.621 T 22-04-2016 IPR026585 Alpha-1,4-glucan:maltose-1-phosphate maltosyltransferase GO:0016757 KEGG: 00500+2.4.99.16 SRM_RS05490 987adeeab305cca13cbf0254afefef08 663 SUPERFAMILY SSF51445 181 553 3.63E-76 T 22-04-2016 IPR017853 Glycoside hydrolase superfamily SRM_RS05490 987adeeab305cca13cbf0254afefef08 663 Pfam PF11896 Domain of unknown function (DUF3416) 7 186 1.4E-45 T 22-04-2016 IPR021828 Alpha-1,4-glucan:maltose-1-phosphate maltosyltransferase, domain N/S GO:0004553 KEGG: 00500+2.4.99.16 SRM_RS05490 987adeeab305cca13cbf0254afefef08 663 Pfam PF00128 Alpha amylase, catalytic domain 216 347 5.2E-5 T 22-04-2016 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 SRM_RS05490 987adeeab305cca13cbf0254afefef08 663 PANTHER PTHR10357:SF137 160 663 3.0E-178 T 22-04-2016 SRM_RS05490 987adeeab305cca13cbf0254afefef08 663 PANTHER PTHR10357:SF137 7 134 3.0E-178 T 22-04-2016 SRM_RS05490 987adeeab305cca13cbf0254afefef08 663 Gene3D G3DSA:2.60.40.1180 557 635 2.5E-5 T 22-04-2016 IPR013780 Glycosyl hydrolase, all-beta SRM_RS05490 987adeeab305cca13cbf0254afefef08 663 PANTHER PTHR10357 160 663 3.0E-178 T 22-04-2016 IPR015902 Glycoside hydrolase, family 13 GO:0003824 SRM_RS05490 987adeeab305cca13cbf0254afefef08 663 PANTHER PTHR10357 7 134 3.0E-178 T 22-04-2016 IPR015902 Glycoside hydrolase, family 13 GO:0003824 SRM_RS05490 987adeeab305cca13cbf0254afefef08 663 Gene3D G3DSA:3.20.20.80 184 551 2.0E-61 T 22-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 SRM_RS05490 987adeeab305cca13cbf0254afefef08 663 SMART SM00642 193 546 0.003 T 22-04-2016 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 SRM_RS07970 687a1bdcdd52bf0f8ff756b0313a040b 243 SMART SM00358 170 237 7.8E-22 T 22-04-2016 IPR014720 Double-stranded RNA-binding domain SRM_RS07970 687a1bdcdd52bf0f8ff756b0313a040b 243 SUPERFAMILY SSF69065 11 154 8.55E-42 T 22-04-2016 IPR000999 Ribonuclease III domain GO:0003723|GO:0004525|GO:0006396 SRM_RS07970 687a1bdcdd52bf0f8ff756b0313a040b 243 SMART SM00535 28 163 8.6E-44 T 22-04-2016 IPR000999 Ribonuclease III domain GO:0003723|GO:0004525|GO:0006396 SRM_RS07970 687a1bdcdd52bf0f8ff756b0313a040b 243 Gene3D G3DSA:3.30.160.20 169 235 6.2E-24 T 22-04-2016 IPR014720 Double-stranded RNA-binding domain SRM_RS07970 687a1bdcdd52bf0f8ff756b0313a040b 243 ProSitePatterns PS00517 Ribonuclease III family signature. 52 60 - T 22-04-2016 IPR000999 Ribonuclease III domain GO:0003723|GO:0004525|GO:0006396 SRM_RS07970 687a1bdcdd52bf0f8ff756b0313a040b 243 PANTHER PTHR11207 30 237 3.4E-57 T 22-04-2016 SRM_RS07970 687a1bdcdd52bf0f8ff756b0313a040b 243 Hamap MF_00104 Ribonuclease 3 [rnc]. 16 233 27.575 T 22-04-2016 IPR011907 Ribonuclease III GO:0003723|GO:0004525|GO:0016075 SRM_RS07970 687a1bdcdd52bf0f8ff756b0313a040b 243 TIGRFAM TIGR02191 RNaseIII: ribonuclease III 25 235 1.3E-64 T 22-04-2016 IPR011907 Ribonuclease III GO:0003723|GO:0004525|GO:0016075 SRM_RS07970 687a1bdcdd52bf0f8ff756b0313a040b 243 Gene3D G3DSA:1.10.1520.10 15 153 9.0E-39 T 22-04-2016 IPR000999 Ribonuclease III domain GO:0003723|GO:0004525|GO:0006396 SRM_RS07970 687a1bdcdd52bf0f8ff756b0313a040b 243 Pfam PF14622 Ribonuclease-III-like 30 157 1.7E-29 T 22-04-2016 IPR000999 Ribonuclease III domain GO:0003723|GO:0004525|GO:0006396 SRM_RS07970 687a1bdcdd52bf0f8ff756b0313a040b 243 Pfam PF00035 Double-stranded RNA binding motif 170 234 7.5E-15 T 22-04-2016 IPR014720 Double-stranded RNA-binding domain SRM_RS07970 687a1bdcdd52bf0f8ff756b0313a040b 243 SUPERFAMILY SSF54768 123 236 1.26E-25 T 22-04-2016 SRM_RS06905 9739d25bf2c05071829e9e377bf2dd47 260 SUPERFAMILY SSF54211 1 143 3.26E-15 T 22-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold SRM_RS06905 9739d25bf2c05071829e9e377bf2dd47 260 PANTHER PTHR42282 1 239 1.6E-21 T 22-04-2016 SRM_RS06905 9739d25bf2c05071829e9e377bf2dd47 260 PANTHER PTHR42282:SF1 1 239 1.6E-21 T 22-04-2016 SRM_RS06905 9739d25bf2c05071829e9e377bf2dd47 260 Gene3D G3DSA:3.30.230.10 67 138 7.4E-9 T 22-04-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup SRM_RS06905 9739d25bf2c05071829e9e377bf2dd47 260 Pfam PF00288 GHMP kinases N terminal domain 71 134 4.9E-7 T 22-04-2016 IPR006204 GHMP kinase N-terminal domain GO:0005524 SRM_RS05425 89d23b0426599b4acaa30fa6e6d3f6ea 696 SUPERFAMILY SSF52172 271 389 8.97E-28 T 22-04-2016 IPR011006 CheY-like superfamily SRM_RS05425 89d23b0426599b4acaa30fa6e6d3f6ea 696 SUPERFAMILY SSF55874 85 252 2.06E-20 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SRM_RS05425 89d23b0426599b4acaa30fa6e6d3f6ea 696 Gene3D G3DSA:1.10.3150.10 401 654 1.5E-46 T 22-04-2016 IPR013976 Metal-dependent hydrolase HDOD SRM_RS05425 89d23b0426599b4acaa30fa6e6d3f6ea 696 SMART SM00387 140 254 1.9E-10 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SRM_RS05425 89d23b0426599b4acaa30fa6e6d3f6ea 696 Gene3D G3DSA:3.30.565.10 101 252 1.7E-22 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SRM_RS05425 89d23b0426599b4acaa30fa6e6d3f6ea 696 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 143 252 3.6E-11 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SRM_RS05425 89d23b0426599b4acaa30fa6e6d3f6ea 696 PANTHER PTHR24423 45 422 3.6E-47 T 22-04-2016 SRM_RS05425 89d23b0426599b4acaa30fa6e6d3f6ea 696 Pfam PF00072 Response regulator receiver domain 274 384 5.1E-20 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SRM_RS05425 89d23b0426599b4acaa30fa6e6d3f6ea 696 SUPERFAMILY SSF109604 401 651 1.73E-39 T 22-04-2016 SRM_RS05425 89d23b0426599b4acaa30fa6e6d3f6ea 696 Gene3D G3DSA:3.40.50.2300 271 391 7.6E-29 T 22-04-2016 SRM_RS05425 89d23b0426599b4acaa30fa6e6d3f6ea 696 SMART SM00448 271 384 4.9E-26 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SRM_RS05425 89d23b0426599b4acaa30fa6e6d3f6ea 696 Pfam PF08668 HDOD domain 408 557 1.9E-28 T 22-04-2016 IPR013976 Metal-dependent hydrolase HDOD SRM_RS06035 39859afa06ca04953203bbcbbd8b0066 258 SUPERFAMILY SSF53098 13 183 2.54E-40 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 SRM_RS06035 39859afa06ca04953203bbcbbd8b0066 258 SMART SM00479 16 187 6.5E-28 T 22-04-2016 IPR013520 Exonuclease, RNase T/DNA polymerase III SRM_RS06035 39859afa06ca04953203bbcbbd8b0066 258 PANTHER PTHR30231 11 242 4.1E-34 T 22-04-2016 SRM_RS06035 39859afa06ca04953203bbcbbd8b0066 258 Pfam PF00929 Exonuclease 18 177 7.0E-18 T 22-04-2016 IPR013520 Exonuclease, RNase T/DNA polymerase III SRM_RS06035 39859afa06ca04953203bbcbbd8b0066 258 PANTHER PTHR30231:SF9 11 242 4.1E-34 T 22-04-2016 SRM_RS06035 39859afa06ca04953203bbcbbd8b0066 258 Gene3D G3DSA:3.30.420.10 15 186 1.9E-35 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 SRM_RS07380 01eb5f295bbf648d21935525c9c09cb6 529 Gene3D G3DSA:3.40.605.10 38 286 1.6E-94 T 22-04-2016 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 SRM_RS07380 01eb5f295bbf648d21935525c9c09cb6 529 Pfam PF00171 Aldehyde dehydrogenase family 51 492 1.8E-158 T 22-04-2016 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 SRM_RS07380 01eb5f295bbf648d21935525c9c09cb6 529 Gene3D G3DSA:3.40.309.10 287 471 6.0E-62 T 22-04-2016 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0008152|GO:0016491|GO:0016620|GO:0055114 SRM_RS07380 01eb5f295bbf648d21935525c9c09cb6 529 SUPERFAMILY SSF53720 37 494 2.36E-156 T 22-04-2016 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 SRM_RS07380 01eb5f295bbf648d21935525c9c09cb6 529 PANTHER PTHR11699 18 493 2.2E-219 T 22-04-2016 SRM_RS02600 1450b8d56c518b543f3fefc3fe107f33 1111 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 444 570 2.1E-9 T 22-04-2016 IPR000014 PAS domain SRM_RS02600 1450b8d56c518b543f3fefc3fe107f33 1111 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 576 699 4.5E-12 T 22-04-2016 IPR000014 PAS domain SRM_RS02600 1450b8d56c518b543f3fefc3fe107f33 1111 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 192 313 1.0E-20 T 22-04-2016 IPR000014 PAS domain SRM_RS02600 1450b8d56c518b543f3fefc3fe107f33 1111 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 370 441 3.5E-8 T 22-04-2016 IPR000014 PAS domain SRM_RS02600 1450b8d56c518b543f3fefc3fe107f33 1111 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 995 1104 1.3E-25 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SRM_RS02600 1450b8d56c518b543f3fefc3fe107f33 1111 SUPERFAMILY SSF55785 432 561 2.27E-16 T 22-04-2016 IPR000014 PAS domain SRM_RS02600 1450b8d56c518b543f3fefc3fe107f33 1111 SMART SM00065 721 859 0.28 T 22-04-2016 IPR003018 GAF domain GO:0005515 SRM_RS02600 1450b8d56c518b543f3fefc3fe107f33 1111 SMART SM00065 43 191 9.8E-4 T 22-04-2016 IPR003018 GAF domain GO:0005515 SRM_RS02600 1450b8d56c518b543f3fefc3fe107f33 1111 Pfam PF13185 GAF domain 42 182 4.7E-9 T 22-04-2016 IPR003018 GAF domain GO:0005515 SRM_RS02600 1450b8d56c518b543f3fefc3fe107f33 1111 Pfam PF08448 PAS fold 470 564 7.3E-7 T 22-04-2016 IPR013656 PAS fold-4 SRM_RS02600 1450b8d56c518b543f3fefc3fe107f33 1111 Gene3D G3DSA:3.30.450.20 191 300 3.6E-23 T 22-04-2016 SRM_RS02600 1450b8d56c518b543f3fefc3fe107f33 1111 SUPERFAMILY SSF47384 857 949 9.81E-18 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SRM_RS02600 1450b8d56c518b543f3fefc3fe107f33 1111 Gene3D G3DSA:3.30.450.20 308 432 6.8E-17 T 22-04-2016 SRM_RS02600 1450b8d56c518b543f3fefc3fe107f33 1111 Gene3D G3DSA:3.30.450.20 567 690 9.0E-28 T 22-04-2016 SRM_RS02600 1450b8d56c518b543f3fefc3fe107f33 1111 PANTHER PTHR24423 559 690 1.4E-117 T 22-04-2016 SRM_RS02600 1450b8d56c518b543f3fefc3fe107f33 1111 PANTHER PTHR24423 181 301 1.4E-117 T 22-04-2016 SRM_RS02600 1450b8d56c518b543f3fefc3fe107f33 1111 PANTHER PTHR24423 850 1109 1.4E-117 T 22-04-2016 SRM_RS02600 1450b8d56c518b543f3fefc3fe107f33 1111 Gene3D G3DSA:1.10.287.130 864 944 6.5E-17 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SRM_RS02600 1450b8d56c518b543f3fefc3fe107f33 1111 SMART SM00091 195 261 3.6E-5 T 22-04-2016 IPR000014 PAS domain SRM_RS02600 1450b8d56c518b543f3fefc3fe107f33 1111 SMART SM00091 575 644 0.0022 T 22-04-2016 IPR000014 PAS domain SRM_RS02600 1450b8d56c518b543f3fefc3fe107f33 1111 SMART SM00091 447 517 1.1 T 22-04-2016 IPR000014 PAS domain SRM_RS02600 1450b8d56c518b543f3fefc3fe107f33 1111 SUPERFAMILY SSF55874 938 1104 1.15E-44 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SRM_RS02600 1450b8d56c518b543f3fefc3fe107f33 1111 SMART SM00387 994 1106 2.7E-38 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SRM_RS02600 1450b8d56c518b543f3fefc3fe107f33 1111 SUPERFAMILY SSF55785 182 304 3.7E-22 T 22-04-2016 IPR000014 PAS domain SRM_RS02600 1450b8d56c518b543f3fefc3fe107f33 1111 SUPERFAMILY SSF55785 581 694 9.99E-22 T 22-04-2016 IPR000014 PAS domain SRM_RS02600 1450b8d56c518b543f3fefc3fe107f33 1111 Gene3D G3DSA:3.30.450.40 41 190 3.5E-15 T 22-04-2016 IPR029016 GAF domain-like SRM_RS02600 1450b8d56c518b543f3fefc3fe107f33 1111 Gene3D G3DSA:3.30.450.40 695 863 7.2E-9 T 22-04-2016 IPR029016 GAF domain-like SRM_RS02600 1450b8d56c518b543f3fefc3fe107f33 1111 Pfam PF08447 PAS fold 600 686 2.5E-19 T 22-04-2016 IPR013655 PAS fold-3 GO:0005515 SRM_RS02600 1450b8d56c518b543f3fefc3fe107f33 1111 Pfam PF00512 His Kinase A (phospho-acceptor) domain 871 948 4.1E-15 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SRM_RS02600 1450b8d56c518b543f3fefc3fe107f33 1111 SUPERFAMILY SSF55781 686 851 7.41E-10 T 22-04-2016 IPR029016 GAF domain-like SRM_RS02600 1450b8d56c518b543f3fefc3fe107f33 1111 Gene3D G3DSA:3.30.565.10 949 1106 8.1E-45 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SRM_RS02600 1450b8d56c518b543f3fefc3fe107f33 1111 SMART SM00086 266 306 22.0 T 22-04-2016 IPR001610 PAC motif SRM_RS02600 1450b8d56c518b543f3fefc3fe107f33 1111 SMART SM00086 523 563 150.0 T 22-04-2016 IPR001610 PAC motif SRM_RS02600 1450b8d56c518b543f3fefc3fe107f33 1111 SMART SM00086 650 692 7.4E-9 T 22-04-2016 IPR001610 PAC motif SRM_RS02600 1450b8d56c518b543f3fefc3fe107f33 1111 SMART SM00086 395 435 0.02 T 22-04-2016 IPR001610 PAC motif SRM_RS02600 1450b8d56c518b543f3fefc3fe107f33 1111 SUPERFAMILY SSF55785 304 433 6.44E-16 T 22-04-2016 IPR000014 PAS domain SRM_RS02600 1450b8d56c518b543f3fefc3fe107f33 1111 Gene3D G3DSA:3.30.450.20 433 554 4.0E-17 T 22-04-2016 SRM_RS02600 1450b8d56c518b543f3fefc3fe107f33 1111 PRINTS PR00344 Bacterial sensor protein C-terminal signature 1090 1103 6.6E-16 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SRM_RS02600 1450b8d56c518b543f3fefc3fe107f33 1111 PRINTS PR00344 Bacterial sensor protein C-terminal signature 1066 1084 6.6E-16 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SRM_RS02600 1450b8d56c518b543f3fefc3fe107f33 1111 PRINTS PR00344 Bacterial sensor protein C-terminal signature 1031 1045 6.6E-16 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SRM_RS02600 1450b8d56c518b543f3fefc3fe107f33 1111 PRINTS PR00344 Bacterial sensor protein C-terminal signature 1049 1059 6.6E-16 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SRM_RS02600 1450b8d56c518b543f3fefc3fe107f33 1111 SMART SM00388 871 948 1.9E-18 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SRM_RS02600 1450b8d56c518b543f3fefc3fe107f33 1111 SUPERFAMILY SSF55781 45 192 8.29E-16 T 22-04-2016 IPR029016 GAF domain-like SRM_RS02600 1450b8d56c518b543f3fefc3fe107f33 1111 Pfam PF13426 PAS domain 374 434 0.65 T 22-04-2016 IPR000014 PAS domain SRM_RS02600 1450b8d56c518b543f3fefc3fe107f33 1111 Pfam PF13426 PAS domain 205 304 2.0E-7 T 22-04-2016 IPR000014 PAS domain SRM_RS07350 6553630eb7771236d7b3bca4c40139b0 254 Gene3D G3DSA:3.60.15.10 4 245 1.4E-42 T 22-04-2016 IPR001279 Metallo-beta-lactamase SRM_RS07350 6553630eb7771236d7b3bca4c40139b0 254 SUPERFAMILY SSF56281 4 237 3.67E-42 T 22-04-2016 IPR001279 Metallo-beta-lactamase SRM_RS07350 6553630eb7771236d7b3bca4c40139b0 254 Pfam PF12706 Beta-lactamase superfamily domain 34 223 4.7E-21 T 22-04-2016 IPR001279 Metallo-beta-lactamase SRM_RS07350 6553630eb7771236d7b3bca4c40139b0 254 PANTHER PTHR12553 4 241 3.7E-32 T 22-04-2016 SRM_RS02135 84882cb0564871d50e9c3033041f927f 151 Gene3D G3DSA:1.20.950.20 32 129 4.7E-5 T 22-04-2016 SRM_RS09810 f2a50626a946247769f9665e02e184e0 768 ProSitePatterns PS00073 Acyl-CoA dehydrogenases signature 2. 530 549 - T 22-04-2016 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 SRM_RS09810 f2a50626a946247769f9665e02e184e0 768 SUPERFAMILY SSF47203 614 764 1.15E-40 T 22-04-2016 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 SRM_RS09810 f2a50626a946247769f9665e02e184e0 768 PANTHER PTHR10909 90 392 1.3E-156 T 22-04-2016 SRM_RS09810 f2a50626a946247769f9665e02e184e0 768 PANTHER PTHR10909 409 591 1.3E-156 T 22-04-2016 SRM_RS09810 f2a50626a946247769f9665e02e184e0 768 PIRSF PIRSF000168 133 764 1.0E-176 T 22-04-2016 IPR012258 Acyl-CoA oxidase GO:0003997|GO:0005777|GO:0006631|GO:0050660|GO:0055114 KEGG: 00071+1.3.3.6|KEGG: 00592+1.3.3.6|MetaCyc: PWY-5136|MetaCyc: PWY-6837|MetaCyc: PWY-6920|MetaCyc: PWY-7007|MetaCyc: PWY-7288|MetaCyc: PWY-7291|MetaCyc: PWY-7337|MetaCyc: PWY-7338|MetaCyc: PWY-7340|MetaCyc: PWY-735|MetaCyc: PWY-7606|MetaCyc: PWY-7726 SRM_RS09810 f2a50626a946247769f9665e02e184e0 768 SUPERFAMILY SSF56645 146 399 9.42E-57 T 22-04-2016 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain GO:0008152|GO:0016627|GO:0055114 SRM_RS09810 f2a50626a946247769f9665e02e184e0 768 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 417 571 1.2E-11 T 22-04-2016 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 SRM_RS09810 f2a50626a946247769f9665e02e184e0 768 Gene3D G3DSA:1.20.140.10 424 579 4.4E-52 T 22-04-2016 SRM_RS09810 f2a50626a946247769f9665e02e184e0 768 Gene3D G3DSA:1.10.540.10 160 267 3.3E-13 T 22-04-2016 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 SRM_RS09810 f2a50626a946247769f9665e02e184e0 768 PANTHER PTHR10909:SF11 90 392 1.3E-156 T 22-04-2016 SRM_RS09810 f2a50626a946247769f9665e02e184e0 768 PANTHER PTHR10909:SF11 409 591 1.3E-156 T 22-04-2016 SRM_RS09810 f2a50626a946247769f9665e02e184e0 768 Gene3D G3DSA:2.40.110.10 273 403 1.3E-46 T 22-04-2016 SRM_RS09810 f2a50626a946247769f9665e02e184e0 768 SUPERFAMILY SSF158682 6 128 1.31E-6 T 22-04-2016 IPR029024 TerB-like SRM_RS09810 f2a50626a946247769f9665e02e184e0 768 Gene3D G3DSA:1.20.140.10 620 749 1.7E-36 T 22-04-2016 SRM_RS09810 f2a50626a946247769f9665e02e184e0 768 Gene3D G3DSA:1.10.3680.10 15 131 3.4E-5 T 22-04-2016 IPR029024 TerB-like SRM_RS09810 f2a50626a946247769f9665e02e184e0 768 SUPERFAMILY SSF47203 413 591 1.95E-49 T 22-04-2016 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 SRM_RS09810 f2a50626a946247769f9665e02e184e0 768 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 274 383 2.8E-17 T 22-04-2016 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0003995|GO:0055114 SRM_RS09810 f2a50626a946247769f9665e02e184e0 768 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 160 266 3.9E-11 T 22-04-2016 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 SRM_RS09810 f2a50626a946247769f9665e02e184e0 768 Pfam PF01756 Acyl-CoA oxidase 623 762 8.6E-27 T 22-04-2016 IPR002655 Acyl-CoA oxidase, C-terminal GO:0003997|GO:0005777|GO:0006635|GO:0055114 KEGG: 00071+1.3.3.6|KEGG: 00592+1.3.3.6|MetaCyc: PWY-5136|MetaCyc: PWY-6837|MetaCyc: PWY-6920|MetaCyc: PWY-7007|MetaCyc: PWY-7288|MetaCyc: PWY-7291|MetaCyc: PWY-7337|MetaCyc: PWY-7338|MetaCyc: PWY-7340|MetaCyc: PWY-735|MetaCyc: PWY-7606|MetaCyc: PWY-7726 SRM_RS15390 48f86e55b29cf027b170151fb5e5a752 349 SUPERFAMILY SSF53686 39 348 6.02E-77 T 22-04-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme SRM_RS15390 48f86e55b29cf027b170151fb5e5a752 349 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 50 337 3.6E-67 T 22-04-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme SRM_RS15390 48f86e55b29cf027b170151fb5e5a752 349 Gene3D G3DSA:3.40.50.1100 173 347 6.0E-48 T 22-04-2016 SRM_RS15390 48f86e55b29cf027b170151fb5e5a752 349 PANTHER PTHR10314:SF8 48 345 8.5E-71 T 22-04-2016 SRM_RS15390 48f86e55b29cf027b170151fb5e5a752 349 ProSitePatterns PS00901 Cysteine synthase/cystathionine beta-synthase P-phosphate attachment site. 71 89 - T 22-04-2016 IPR001216 Cysteine synthase/cystathionine beta-synthase, pyridoxal-phosphate attachment site GO:0006535 SRM_RS15390 48f86e55b29cf027b170151fb5e5a752 349 PANTHER PTHR10314 48 345 8.5E-71 T 22-04-2016 SRM_RS15390 48f86e55b29cf027b170151fb5e5a752 349 Gene3D G3DSA:3.40.50.1100 76 172 2.3E-28 T 22-04-2016 SRM_RS11125 e870b4aa9226dd6dfd3e28030dc175ef 266 PANTHER PTHR34185:SF1 6 265 5.4E-78 T 22-04-2016 SRM_RS11125 e870b4aa9226dd6dfd3e28030dc175ef 266 Gene3D G3DSA:3.40.1700.10 108 237 1.6E-46 T 22-04-2016 SRM_RS11125 e870b4aa9226dd6dfd3e28030dc175ef 266 Pfam PF02457 DisA bacterial checkpoint controller nucleotide-binding 116 232 8.5E-41 T 22-04-2016 IPR003390 DNA integrity scanning protein, DisA, N-terminal SRM_RS11125 e870b4aa9226dd6dfd3e28030dc175ef 266 SUPERFAMILY SSF143597 41 236 3.01E-59 T 22-04-2016 SRM_RS11125 e870b4aa9226dd6dfd3e28030dc175ef 266 PIRSF PIRSF004793 7 264 4.6E-76 T 22-04-2016 IPR014046 Diadenylate cyclase-like SRM_RS11125 e870b4aa9226dd6dfd3e28030dc175ef 266 TIGRFAM TIGR00159 TIGR00159: TIGR00159 family protein 12 246 1.1E-65 T 22-04-2016 IPR014046 Diadenylate cyclase-like SRM_RS11125 e870b4aa9226dd6dfd3e28030dc175ef 266 PANTHER PTHR34185 6 265 5.4E-78 T 22-04-2016 SRM_RS09905 5d1380d0ca627f3b0b1302257e64e414 254 PANTHER PTHR10264 6 248 5.1E-93 T 22-04-2016 IPR001972 Stomatin family GO:0016020 SRM_RS09905 5d1380d0ca627f3b0b1302257e64e414 254 Pfam PF01145 SPFH domain / Band 7 family 24 193 6.7E-31 T 22-04-2016 IPR001107 Band 7 domain SRM_RS09905 5d1380d0ca627f3b0b1302257e64e414 254 SMART SM00244 20 177 8.2E-55 T 22-04-2016 IPR001107 Band 7 domain SRM_RS09905 5d1380d0ca627f3b0b1302257e64e414 254 PRINTS PR00721 Stomatin signature 153 171 7.7E-56 T 22-04-2016 IPR001972 Stomatin family GO:0016020 SRM_RS09905 5d1380d0ca627f3b0b1302257e64e414 254 PRINTS PR00721 Stomatin signature 27 49 7.7E-56 T 22-04-2016 IPR001972 Stomatin family GO:0016020 SRM_RS09905 5d1380d0ca627f3b0b1302257e64e414 254 PRINTS PR00721 Stomatin signature 197 220 7.7E-56 T 22-04-2016 IPR001972 Stomatin family GO:0016020 SRM_RS09905 5d1380d0ca627f3b0b1302257e64e414 254 PRINTS PR00721 Stomatin signature 129 152 7.7E-56 T 22-04-2016 IPR001972 Stomatin family GO:0016020 SRM_RS09905 5d1380d0ca627f3b0b1302257e64e414 254 PRINTS PR00721 Stomatin signature 109 126 7.7E-56 T 22-04-2016 IPR001972 Stomatin family GO:0016020 SRM_RS09905 5d1380d0ca627f3b0b1302257e64e414 254 PRINTS PR00721 Stomatin signature 172 193 7.7E-56 T 22-04-2016 IPR001972 Stomatin family GO:0016020 SRM_RS09905 5d1380d0ca627f3b0b1302257e64e414 254 PRINTS PR00721 Stomatin signature 74 95 7.7E-56 T 22-04-2016 IPR001972 Stomatin family GO:0016020 SRM_RS09905 5d1380d0ca627f3b0b1302257e64e414 254 SUPERFAMILY SSF117892 51 184 1.2E-41 T 22-04-2016 IPR001107 Band 7 domain SRM_RS09905 5d1380d0ca627f3b0b1302257e64e414 254 PANTHER PTHR10264:SF60 6 248 5.1E-93 T 22-04-2016 SRM_RS10815 df2a78d069d2219ee1e6a25706d70faa 260 Pfam PF13344 Haloacid dehalogenase-like hydrolase 9 107 1.2E-21 T 22-04-2016 IPR006357 HAD-superfamily hydrolase, subfamily IIA SRM_RS10815 df2a78d069d2219ee1e6a25706d70faa 260 PIRSF PIRSF000915 2 256 1.5E-57 T 22-04-2016 IPR006357 HAD-superfamily hydrolase, subfamily IIA SRM_RS10815 df2a78d069d2219ee1e6a25706d70faa 260 Gene3D G3DSA:3.40.50.10410 88 180 6.6E-30 T 22-04-2016 IPR023215 Nitrophenylphosphatase-like domain SRM_RS10815 df2a78d069d2219ee1e6a25706d70faa 260 Gene3D G3DSA:3.40.50.1000 4 82 4.7E-39 T 22-04-2016 IPR023214 HAD-like domain SRM_RS10815 df2a78d069d2219ee1e6a25706d70faa 260 Gene3D G3DSA:3.40.50.1000 181 253 4.7E-39 T 22-04-2016 IPR023214 HAD-like domain SRM_RS10815 df2a78d069d2219ee1e6a25706d70faa 260 TIGRFAM TIGR01460 HAD-SF-IIA: HAD hydrolase, family IIA 10 227 2.4E-38 T 22-04-2016 IPR006357 HAD-superfamily hydrolase, subfamily IIA SRM_RS10815 df2a78d069d2219ee1e6a25706d70faa 260 PANTHER PTHR19288 2 253 1.7E-77 T 22-04-2016 SRM_RS10815 df2a78d069d2219ee1e6a25706d70faa 260 SUPERFAMILY SSF56784 6 252 3.81E-59 T 22-04-2016 IPR023214 HAD-like domain SRM_RS10815 df2a78d069d2219ee1e6a25706d70faa 260 Pfam PF13242 HAD-hyrolase-like 181 251 2.1E-17 T 22-04-2016 SRM_RS10815 df2a78d069d2219ee1e6a25706d70faa 260 TIGRFAM TIGR01549 HAD-SF-IA-v1: HAD hydrolase, family IA, variant 1 181 219 1.4E-5 T 22-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 SRM_RS13275 8a53c397db0d389731897e5c578d75cf 200 Pfam PF01351 Ribonuclease HII 17 196 4.2E-34 T 22-04-2016 IPR024567 Ribonuclease HII/HIII domain SRM_RS13275 8a53c397db0d389731897e5c578d75cf 200 SUPERFAMILY SSF53098 5 199 6.83E-61 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 SRM_RS13275 8a53c397db0d389731897e5c578d75cf 200 Gene3D G3DSA:3.30.420.10 15 159 4.3E-41 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 SRM_RS13275 8a53c397db0d389731897e5c578d75cf 200 PANTHER PTHR10954:SF10 5 195 5.1E-60 T 22-04-2016 SRM_RS13275 8a53c397db0d389731897e5c578d75cf 200 Hamap MF_00052_B Ribonuclease HII [rnhB]. 15 198 32.732 T 22-04-2016 IPR022898 Ribonuclease HII GO:0004523 SRM_RS13275 8a53c397db0d389731897e5c578d75cf 200 PANTHER PTHR10954 5 195 5.1E-60 T 22-04-2016 IPR001352 Ribonuclease HII/HIII GO:0003723|GO:0004523 SRM_RS14615 a0f989321a05b93502631ca6604c4b36 426 Gene3D G3DSA:1.20.1330.10 327 381 8.8E-39 T 22-04-2016 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 SRM_RS14615 a0f989321a05b93502631ca6604c4b36 426 Gene3D G3DSA:1.20.1330.10 60 182 8.8E-39 T 22-04-2016 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 SRM_RS14615 a0f989321a05b93502631ca6604c4b36 426 Pfam PF00700 Bacterial flagellin C-terminal helical region 339 424 1.6E-20 T 22-04-2016 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 SRM_RS14615 a0f989321a05b93502631ca6604c4b36 426 PRINTS PR00207 Flagellin signature 113 136 2.4E-16 T 22-04-2016 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 SRM_RS14615 a0f989321a05b93502631ca6604c4b36 426 PRINTS PR00207 Flagellin signature 78 97 2.4E-16 T 22-04-2016 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 SRM_RS14615 a0f989321a05b93502631ca6604c4b36 426 PRINTS PR00207 Flagellin signature 39 56 2.4E-16 T 22-04-2016 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 SRM_RS14615 a0f989321a05b93502631ca6604c4b36 426 PANTHER PTHR30244:SF1 335 424 2.6E-67 T 22-04-2016 SRM_RS14615 a0f989321a05b93502631ca6604c4b36 426 PANTHER PTHR30244:SF1 224 307 2.6E-67 T 22-04-2016 SRM_RS14615 a0f989321a05b93502631ca6604c4b36 426 PANTHER PTHR30244:SF1 4 201 2.6E-67 T 22-04-2016 SRM_RS14615 a0f989321a05b93502631ca6604c4b36 426 PANTHER PTHR30244 335 424 2.6E-67 T 22-04-2016 SRM_RS14615 a0f989321a05b93502631ca6604c4b36 426 PANTHER PTHR30244 224 307 2.6E-67 T 22-04-2016 SRM_RS14615 a0f989321a05b93502631ca6604c4b36 426 PANTHER PTHR30244 4 201 2.6E-67 T 22-04-2016 SRM_RS14615 a0f989321a05b93502631ca6604c4b36 426 SUPERFAMILY SSF64518 6 424 4.58E-75 T 22-04-2016 SRM_RS14615 a0f989321a05b93502631ca6604c4b36 426 Pfam PF00669 Bacterial flagellin N-terminal helical region 7 144 1.1E-32 T 22-04-2016 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 SRM_RS00930 0a088427322d0607996365f15d7926fe 65 Hamap MF_00340 50S ribosomal protein L32 [rpmF]. 1 57 20.997 T 22-04-2016 IPR002677 Ribosomal protein L32p GO:0003735|GO:0006412|GO:0015934 SRM_RS00930 0a088427322d0607996365f15d7926fe 65 PANTHER PTHR35534 1 63 4.3E-15 T 22-04-2016 SRM_RS00930 0a088427322d0607996365f15d7926fe 65 Pfam PF01783 Ribosomal L32p protein family 2 58 3.8E-26 T 22-04-2016 IPR002677 Ribosomal protein L32p GO:0003735|GO:0006412|GO:0015934 SRM_RS00930 0a088427322d0607996365f15d7926fe 65 TIGRFAM TIGR01031 rpmF_bact: ribosomal protein bL32 2 58 1.0E-23 T 22-04-2016 IPR002677 Ribosomal protein L32p GO:0003735|GO:0006412|GO:0015934 SRM_RS00930 0a088427322d0607996365f15d7926fe 65 SUPERFAMILY SSF57829 1 58 5.01E-20 T 22-04-2016 IPR011332 Zinc-binding ribosomal protein GO:0006412 SRM_RS01895 a27a0128b67fa75ec6fc07abf1eba043 329 PANTHER PTHR12526 10 325 9.9E-60 T 22-04-2016 SRM_RS01895 a27a0128b67fa75ec6fc07abf1eba043 329 SUPERFAMILY SSF53756 35 325 1.84E-70 T 22-04-2016 SRM_RS01895 a27a0128b67fa75ec6fc07abf1eba043 329 PANTHER PTHR12526:SF399 10 325 9.9E-60 T 22-04-2016 SRM_RS01895 a27a0128b67fa75ec6fc07abf1eba043 329 Gene3D G3DSA:3.40.50.2000 111 304 1.3E-27 T 22-04-2016 SRM_RS01895 a27a0128b67fa75ec6fc07abf1eba043 329 Pfam PF13439 Glycosyltransferase Family 4 45 123 2.6E-7 T 22-04-2016 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain SRM_RS01895 a27a0128b67fa75ec6fc07abf1eba043 329 Pfam PF00534 Glycosyl transferases group 1 139 303 2.7E-33 T 22-04-2016 IPR001296 Glycosyl transferase, family 1 SRM_RS07015 258d2068c8267ff67025d1ecc706dd0e 262 PANTHER PTHR31088 2 261 2.3E-17 T 22-04-2016 SRM_RS07015 258d2068c8267ff67025d1ecc706dd0e 262 Pfam PF04012 PspA/IM30 family 2 216 7.0E-22 T 22-04-2016 IPR007157 PspA/IM30 SRM_RS07015 258d2068c8267ff67025d1ecc706dd0e 262 Gene3D G3DSA:1.20.5.340 22 69 5.3E-4 T 22-04-2016 SRM_RS09345 e461e45d181085a236731958864beddc 519 Gene3D G3DSA:2.30.42.10 423 507 2.1E-12 T 22-04-2016 IPR001478 PDZ domain GO:0005515 SRM_RS09345 e461e45d181085a236731958864beddc 519 Gene3D G3DSA:2.30.42.10 305 397 2.3E-23 T 22-04-2016 IPR001478 PDZ domain GO:0005515 SRM_RS09345 e461e45d181085a236731958864beddc 519 SUPERFAMILY SSF50156 422 510 2.13E-9 T 22-04-2016 IPR001478 PDZ domain GO:0005515 SRM_RS09345 e461e45d181085a236731958864beddc 519 SUPERFAMILY SSF50494 66 295 3.15E-63 T 22-04-2016 IPR009003 Peptidase S1, PA clan SRM_RS09345 e461e45d181085a236731958864beddc 519 PANTHER PTHR22939:SF79 16 490 1.5E-107 T 22-04-2016 SRM_RS09345 e461e45d181085a236731958864beddc 519 Pfam PF13180 PDZ domain 319 393 3.6E-17 T 22-04-2016 IPR001478 PDZ domain GO:0005515 SRM_RS09345 e461e45d181085a236731958864beddc 519 SMART SM00228 421 504 16.0 T 22-04-2016 IPR001478 PDZ domain GO:0005515 SRM_RS09345 e461e45d181085a236731958864beddc 519 SMART SM00228 303 384 6.0E-12 T 22-04-2016 IPR001478 PDZ domain GO:0005515 SRM_RS09345 e461e45d181085a236731958864beddc 519 PANTHER PTHR22939 16 490 1.5E-107 T 22-04-2016 SRM_RS09345 e461e45d181085a236731958864beddc 519 PRINTS PR00834 HtrA/DegQ protease family signature 257 274 1.2E-40 T 22-04-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 SRM_RS09345 e461e45d181085a236731958864beddc 519 PRINTS PR00834 HtrA/DegQ protease family signature 128 140 1.2E-40 T 22-04-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 SRM_RS09345 e461e45d181085a236731958864beddc 519 PRINTS PR00834 HtrA/DegQ protease family signature 149 169 1.2E-40 T 22-04-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 SRM_RS09345 e461e45d181085a236731958864beddc 519 PRINTS PR00834 HtrA/DegQ protease family signature 235 252 1.2E-40 T 22-04-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 SRM_RS09345 e461e45d181085a236731958864beddc 519 PRINTS PR00834 HtrA/DegQ protease family signature 342 354 1.2E-40 T 22-04-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 SRM_RS09345 e461e45d181085a236731958864beddc 519 Gene3D G3DSA:2.40.10.10 65 180 1.3E-37 T 22-04-2016 SRM_RS09345 e461e45d181085a236731958864beddc 519 SUPERFAMILY SSF50156 288 393 4.07E-21 T 22-04-2016 IPR001478 PDZ domain GO:0005515 SRM_RS09345 e461e45d181085a236731958864beddc 519 Gene3D G3DSA:2.40.10.10 181 304 1.1E-42 T 22-04-2016 SRM_RS09345 e461e45d181085a236731958864beddc 519 Pfam PF13365 Trypsin-like peptidase domain 119 264 1.7E-33 T 22-04-2016 SRM_RS15405 2f105a3f1d6bb1a9dec61bd719ea034b 253 Gene3D G3DSA:3.40.50.2300 8 126 1.8E-24 T 22-04-2016 SRM_RS15405 2f105a3f1d6bb1a9dec61bd719ea034b 253 SMART SM00421 156 213 2.5E-11 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 SRM_RS15405 2f105a3f1d6bb1a9dec61bd719ea034b 253 PANTHER PTHR26402 9 215 2.9E-46 T 22-04-2016 SRM_RS15405 2f105a3f1d6bb1a9dec61bd719ea034b 253 SUPERFAMILY SSF52172 9 140 7.83E-25 T 22-04-2016 IPR011006 CheY-like superfamily SRM_RS15405 2f105a3f1d6bb1a9dec61bd719ea034b 253 Gene3D G3DSA:1.10.10.10 127 215 3.5E-18 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SRM_RS15405 2f105a3f1d6bb1a9dec61bd719ea034b 253 SUPERFAMILY SSF46894 151 216 4.76E-14 T 22-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 SRM_RS15405 2f105a3f1d6bb1a9dec61bd719ea034b 253 Pfam PF00196 Bacterial regulatory proteins, luxR family 159 213 1.8E-11 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 SRM_RS15405 2f105a3f1d6bb1a9dec61bd719ea034b 253 SMART SM00448 9 122 4.0E-17 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SRM_RS15405 2f105a3f1d6bb1a9dec61bd719ea034b 253 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 159 173 2.8E-7 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 SRM_RS15405 2f105a3f1d6bb1a9dec61bd719ea034b 253 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 189 201 2.8E-7 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 SRM_RS15405 2f105a3f1d6bb1a9dec61bd719ea034b 253 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 173 189 2.8E-7 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 SRM_RS15405 2f105a3f1d6bb1a9dec61bd719ea034b 253 PANTHER PTHR26402:SF151 9 215 2.9E-46 T 22-04-2016 SRM_RS15405 2f105a3f1d6bb1a9dec61bd719ea034b 253 Pfam PF00072 Response regulator receiver domain 12 123 9.2E-24 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SRM_RS03560 e87140305a34242e13fad7a88dfef9f7 265 Gene3D G3DSA:2.30.30.100 227 264 1.0E-9 T 22-04-2016 SRM_RS03560 e87140305a34242e13fad7a88dfef9f7 265 SUPERFAMILY SSF55681 14 212 1.44E-53 T 22-04-2016 SRM_RS03560 e87140305a34242e13fad7a88dfef9f7 265 TIGRFAM TIGR00121 birA_ligase: biotin--[acetyl-CoA-carboxylase] ligase 24 262 2.4E-47 T 22-04-2016 IPR004408 Biotin--acetyl-CoA-carboxylase ligase GO:0004077|GO:0006464 SRM_RS03560 e87140305a34242e13fad7a88dfef9f7 265 PANTHER PTHR12835 13 262 2.6E-65 T 22-04-2016 IPR004408 Biotin--acetyl-CoA-carboxylase ligase GO:0004077|GO:0006464 SRM_RS03560 e87140305a34242e13fad7a88dfef9f7 265 Pfam PF02237 Biotin protein ligase C terminal domain 224 261 2.9E-8 T 22-04-2016 IPR003142 Biotin protein ligase, C-terminal GO:0006464 KEGG: 00780+6.3.4.15 SRM_RS03560 e87140305a34242e13fad7a88dfef9f7 265 Pfam PF03099 Biotin/lipoate A/B protein ligase family 30 152 1.2E-9 T 22-04-2016 IPR004143 Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL), catalytic domain GO:0006464 SRM_RS03560 e87140305a34242e13fad7a88dfef9f7 265 Gene3D G3DSA:3.30.930.10 11 212 1.1E-59 T 22-04-2016 SRM_RS03560 e87140305a34242e13fad7a88dfef9f7 265 SUPERFAMILY SSF50037 228 264 1.97E-6 T 22-04-2016 IPR008988 Transcriptional repressor, C-terminal SRM_RS05190 da08b98e2033d8e957154f026753ef59 208 PANTHER PTHR24220 5 206 2.1E-53 T 22-04-2016 SRM_RS05190 da08b98e2033d8e957154f026753ef59 208 Gene3D G3DSA:3.40.50.300 3 205 5.7E-44 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SRM_RS05190 da08b98e2033d8e957154f026753ef59 208 SMART SM00382 28 208 1.3E-12 T 22-04-2016 IPR003593 AAA+ ATPase domain SRM_RS05190 da08b98e2033d8e957154f026753ef59 208 SUPERFAMILY SSF52540 3 207 4.91E-42 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SRM_RS05190 da08b98e2033d8e957154f026753ef59 208 PANTHER PTHR24220:SF563 5 206 2.1E-53 T 22-04-2016 SRM_RS05190 da08b98e2033d8e957154f026753ef59 208 Pfam PF00005 ABC transporter 20 160 4.2E-26 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 SRM_RS11880 0c80b045ccc5cd7de8bc0786a735c9ba 157 PANTHER PTHR22881 25 150 1.4E-18 T 22-04-2016 SRM_RS11880 0c80b045ccc5cd7de8bc0786a735c9ba 157 ProSitePatterns PS01306 Uncharacterized protein family UPF0054 signature. 121 131 - T 22-04-2016 IPR020549 Endoribonuclease YbeY, conserved site SRM_RS11880 0c80b045ccc5cd7de8bc0786a735c9ba 157 Hamap MF_00009 Endoribonuclease YbeY [ybeY]. 8 157 17.404 T 22-04-2016 IPR002036 Endoribonuclease YbeY GO:0004222|GO:0006364 SRM_RS11880 0c80b045ccc5cd7de8bc0786a735c9ba 157 Gene3D G3DSA:3.40.390.30 10 151 2.9E-32 T 22-04-2016 IPR023091 Metalloprotease catalytic domain, predicted GO:0004222 SRM_RS11880 0c80b045ccc5cd7de8bc0786a735c9ba 157 SUPERFAMILY SSF55486 17 151 2.37E-31 T 22-04-2016 SRM_RS11880 0c80b045ccc5cd7de8bc0786a735c9ba 157 Pfam PF02130 Uncharacterized protein family UPF0054 26 150 1.8E-28 T 22-04-2016 IPR002036 Endoribonuclease YbeY GO:0004222|GO:0006364 SRM_RS11880 0c80b045ccc5cd7de8bc0786a735c9ba 157 TIGRFAM TIGR00043 TIGR00043: rRNA maturation RNase YbeY 42 150 1.2E-28 T 22-04-2016 IPR002036 Endoribonuclease YbeY GO:0004222|GO:0006364 SRM_RS05720 574920caf3b592bb92bcbfb233afa48f 634 Gene3D G3DSA:1.10.287.950 339 556 2.5E-55 T 22-04-2016 SRM_RS05720 574920caf3b592bb92bcbfb233afa48f 634 Pfam PF00672 HAMP domain 163 229 1.3E-14 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 SRM_RS05720 574920caf3b592bb92bcbfb233afa48f 634 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 384 585 1.5E-51 T 22-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 SRM_RS05720 574920caf3b592bb92bcbfb233afa48f 634 SMART SM00283 325 586 2.6E-75 T 22-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 SRM_RS05720 574920caf3b592bb92bcbfb233afa48f 634 SUPERFAMILY SSF58104 278 587 3.75E-76 T 22-04-2016 SRM_RS05720 574920caf3b592bb92bcbfb233afa48f 634 SMART SM00304 380 436 25.0 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 SRM_RS05720 574920caf3b592bb92bcbfb233afa48f 634 SMART SM00304 258 310 2.3E-7 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 SRM_RS05720 574920caf3b592bb92bcbfb233afa48f 634 SMART SM00304 181 233 5.1E-15 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 SRM_RS05720 574920caf3b592bb92bcbfb233afa48f 634 SMART SM00304 513 583 58.0 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 SRM_RS05720 574920caf3b592bb92bcbfb233afa48f 634 PANTHER PTHR32089 131 215 7.6E-113 T 22-04-2016 SRM_RS05720 574920caf3b592bb92bcbfb233afa48f 634 PANTHER PTHR32089 293 589 7.6E-113 T 22-04-2016 SRM_RS05720 574920caf3b592bb92bcbfb233afa48f 634 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 423 450 4.4E-19 T 22-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 SRM_RS05720 574920caf3b592bb92bcbfb233afa48f 634 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 452 481 4.4E-19 T 22-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 SRM_RS05720 574920caf3b592bb92bcbfb233afa48f 634 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 112 127 4.4E-19 T 22-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 SRM_RS05720 574920caf3b592bb92bcbfb233afa48f 634 SUPERFAMILY SSF158472 182 230 2.62E-9 T 22-04-2016 SRM_RS06225 a5bac1c7dcf2eb2d0d1425f900daad90 106 Gene3D G3DSA:2.60.120.10 23 105 2.0E-27 T 22-04-2016 IPR014710 RmlC-like jelly roll fold SRM_RS06225 a5bac1c7dcf2eb2d0d1425f900daad90 106 Pfam PF07883 Cupin domain 33 98 1.7E-16 T 22-04-2016 IPR013096 Cupin 2, conserved barrel SRM_RS06225 a5bac1c7dcf2eb2d0d1425f900daad90 106 SUPERFAMILY SSF51182 22 100 2.79E-23 T 22-04-2016 IPR011051 RmlC-like cupin domain SRM_RS06225 a5bac1c7dcf2eb2d0d1425f900daad90 106 ProDom PD080544 SYNTHASE 4.2.1.- LYASE L-ECTOINE DEHYDRATASE N-ACETYLDIAMINOBUTYRATE ECTOINE ENZYME SYNTHASE:ECTOINE ECTC 38 100 0.004 T 22-04-2016 IPR010462 Ectoine synthase GO:0019491|GO:0033990 KEGG: 00260+4.2.1.108|KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707|UniPathway: UPA00067 SRM_RS06225 a5bac1c7dcf2eb2d0d1425f900daad90 106 PANTHER PTHR40112 22 105 1.3E-16 T 22-04-2016 SRM_RS12425 fc8aa071a81ef22752e96ce3b774dbb2 910 Gene3D G3DSA:3.30.1360.40 236 332 5.4E-34 T 22-04-2016 IPR024946 Arginine repressor C-terminal-like domain SRM_RS12425 fc8aa071a81ef22752e96ce3b774dbb2 910 SMART SM00434 11 513 4.7E-259 T 22-04-2016 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 SRM_RS12425 fc8aa071a81ef22752e96ce3b774dbb2 910 Pfam PF00521 DNA gyrase/topoisomerase IV, subunit A 32 520 2.2E-150 T 22-04-2016 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 SRM_RS12425 fc8aa071a81ef22752e96ce3b774dbb2 910 PANTHER PTHR10169 2 416 0.0 T 22-04-2016 SRM_RS12425 fc8aa071a81ef22752e96ce3b774dbb2 910 PANTHER PTHR10169 464 835 0.0 T 22-04-2016 SRM_RS12425 fc8aa071a81ef22752e96ce3b774dbb2 910 TIGRFAM TIGR01063 gyrA: DNA gyrase, A subunit 8 866 0.0 T 22-04-2016 IPR005743 DNA gyrase, subunit A GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 SRM_RS12425 fc8aa071a81ef22752e96ce3b774dbb2 910 Gene3D G3DSA:1.10.268.10 363 511 3.4E-38 T 22-04-2016 IPR013757 Type IIA DNA topoisomerase subunit A, alpha-helical domain GO:0003677|GO:0003918|GO:0005524|GO:0006265 SRM_RS12425 fc8aa071a81ef22752e96ce3b774dbb2 910 SUPERFAMILY SSF56719 30 535 2.62E-171 T 22-04-2016 IPR013760 DNA topoisomerase, type IIA-like domain GO:0003918|GO:0005524 SRM_RS12425 fc8aa071a81ef22752e96ce3b774dbb2 910 Gene3D G3DSA:2.120.10.90 546 865 2.2E-112 T 22-04-2016 SRM_RS12425 fc8aa071a81ef22752e96ce3b774dbb2 910 Hamap MF_01897 DNA gyrase subunit A [gyrA]. 2 869 28.312 T 22-04-2016 IPR005743 DNA gyrase, subunit A GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 SRM_RS12425 fc8aa071a81ef22752e96ce3b774dbb2 910 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 667 709 2.6E-8 T 22-04-2016 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal beta-pinwheel GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 SRM_RS12425 fc8aa071a81ef22752e96ce3b774dbb2 910 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 603 653 1.7E-7 T 22-04-2016 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal beta-pinwheel GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 SRM_RS12425 fc8aa071a81ef22752e96ce3b774dbb2 910 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 555 599 1.9E-9 T 22-04-2016 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal beta-pinwheel GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 SRM_RS12425 fc8aa071a81ef22752e96ce3b774dbb2 910 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 819 865 1.4E-13 T 22-04-2016 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal beta-pinwheel GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 SRM_RS12425 fc8aa071a81ef22752e96ce3b774dbb2 910 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 715 761 1.9E-10 T 22-04-2016 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal beta-pinwheel GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 SRM_RS12425 fc8aa071a81ef22752e96ce3b774dbb2 910 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 769 812 3.0E-9 T 22-04-2016 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal beta-pinwheel GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 SRM_RS12425 fc8aa071a81ef22752e96ce3b774dbb2 910 Gene3D G3DSA:3.90.199.10 34 216 3.9E-82 T 22-04-2016 IPR013758 DNA topoisomerase, type IIA, subunit A/ C-terminal, alpha-beta GO:0003677|GO:0003918|GO:0005524|GO:0006259|GO:0006265 SRM_RS12425 fc8aa071a81ef22752e96ce3b774dbb2 910 SUPERFAMILY SSF101904 548 877 1.06E-96 T 22-04-2016 SRM_RS12425 fc8aa071a81ef22752e96ce3b774dbb2 910 PANTHER PTHR10169:SF48 2 416 0.0 T 22-04-2016 SRM_RS12425 fc8aa071a81ef22752e96ce3b774dbb2 910 PANTHER PTHR10169:SF48 464 835 0.0 T 22-04-2016 SRM_RS00895 e9c1824a1c6a350d9fd1f1d424515558 189 Hamap MF_00040 Ribosome-recycling factor [frr]. 7 189 25.027 T 22-04-2016 IPR002661 Ribosome recycling factor GO:0006412 SRM_RS00895 e9c1824a1c6a350d9fd1f1d424515558 189 Gene3D G3DSA:3.30.1360.40 34 116 3.3E-36 T 22-04-2016 IPR024946 Arginine repressor C-terminal-like domain SRM_RS00895 e9c1824a1c6a350d9fd1f1d424515558 189 PANTHER PTHR20982 1 189 2.1E-67 T 22-04-2016 IPR002661 Ribosome recycling factor GO:0006412 SRM_RS00895 e9c1824a1c6a350d9fd1f1d424515558 189 SUPERFAMILY SSF55194 7 188 1.57E-61 T 22-04-2016 IPR023584 Ribosome recycling factor domain SRM_RS00895 e9c1824a1c6a350d9fd1f1d424515558 189 Pfam PF01765 Ribosome recycling factor 25 187 1.2E-55 T 22-04-2016 IPR023584 Ribosome recycling factor domain SRM_RS00895 e9c1824a1c6a350d9fd1f1d424515558 189 TIGRFAM TIGR00496 frr: ribosome recycling factor 14 189 2.9E-60 T 22-04-2016 IPR002661 Ribosome recycling factor GO:0006412 SRM_RS15010 0739f8ac000d005d77107aadfe774b1d 106 Gene3D G3DSA:3.30.70.900 11 102 9.7E-4 T 22-04-2016 SRM_RS15010 0739f8ac000d005d77107aadfe774b1d 106 SUPERFAMILY SSF54909 1 80 1.07E-6 T 22-04-2016 IPR011008 Dimeric alpha-beta barrel SRM_RS05700 882f84d8667b724cb2d04d78cf277b09 691 Gene3D G3DSA:1.10.287.610 18 83 1.4E-28 T 22-04-2016 SRM_RS05700 882f84d8667b724cb2d04d78cf277b09 691 Pfam PF01653 NAD-dependent DNA ligase adenylation domain 22 336 6.2E-118 T 22-04-2016 IPR013839 NAD-dependent DNA ligase, adenylation GO:0003911 SRM_RS05700 882f84d8667b724cb2d04d78cf277b09 691 PANTHER PTHR23389 13 550 1.2E-179 T 22-04-2016 SRM_RS05700 882f84d8667b724cb2d04d78cf277b09 691 SUPERFAMILY SSF56091 21 334 6.72E-113 T 22-04-2016 SRM_RS05700 882f84d8667b724cb2d04d78cf277b09 691 Pfam PF14520 Helix-hairpin-helix domain 464 518 3.2E-7 T 22-04-2016 SRM_RS05700 882f84d8667b724cb2d04d78cf277b09 691 Gene3D G3DSA:3.30.470.30 135 268 3.8E-50 T 22-04-2016 SRM_RS05700 882f84d8667b724cb2d04d78cf277b09 691 SMART SM00532 20 466 1.3E-238 T 22-04-2016 IPR013840 NAD-dependent DNA ligase, N-terminal GO:0003911 SRM_RS05700 882f84d8667b724cb2d04d78cf277b09 691 SMART SM00278 498 517 1200.0 T 22-04-2016 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 SRM_RS05700 882f84d8667b724cb2d04d78cf277b09 691 SMART SM00278 562 581 530.0 T 22-04-2016 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 SRM_RS05700 882f84d8667b724cb2d04d78cf277b09 691 SMART SM00278 464 483 0.31 T 22-04-2016 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 SRM_RS05700 882f84d8667b724cb2d04d78cf277b09 691 SMART SM00278 530 549 1800.0 T 22-04-2016 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 SRM_RS05700 882f84d8667b724cb2d04d78cf277b09 691 Gene3D G3DSA:1.10.150.20 453 521 2.3E-26 T 22-04-2016 SRM_RS05700 882f84d8667b724cb2d04d78cf277b09 691 Gene3D G3DSA:2.40.50.140 338 409 8.9E-32 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold SRM_RS05700 882f84d8667b724cb2d04d78cf277b09 691 ProSitePatterns PS01056 NAD-dependent DNA ligase signature 2. 349 364 - T 22-04-2016 IPR033136 NAD-dependent DNA ligase, conserved site SRM_RS05700 882f84d8667b724cb2d04d78cf277b09 691 SUPERFAMILY SSF47781 422 601 1.0E-56 T 22-04-2016 IPR010994 RuvA domain 2-like Reactome: REACT_216 SRM_RS05700 882f84d8667b724cb2d04d78cf277b09 691 PIRSF PIRSF001604 13 688 9.6E-246 T 22-04-2016 IPR001679 NAD-dependent DNA ligase GO:0003911|GO:0006260|GO:0006281 SRM_RS05700 882f84d8667b724cb2d04d78cf277b09 691 Gene3D G3DSA:1.10.150.20 524 602 6.7E-29 T 22-04-2016 SRM_RS05700 882f84d8667b724cb2d04d78cf277b09 691 PANTHER PTHR23389:SF9 13 550 1.2E-179 T 22-04-2016 SRM_RS05700 882f84d8667b724cb2d04d78cf277b09 691 Pfam PF00533 BRCA1 C Terminus (BRCT) domain 611 679 1.4E-9 T 22-04-2016 IPR001357 BRCT domain SRM_RS05700 882f84d8667b724cb2d04d78cf277b09 691 Pfam PF03120 NAD-dependent DNA ligase OB-fold domain 339 416 2.7E-33 T 22-04-2016 IPR004150 NAD-dependent DNA ligase, OB-fold GO:0003911|GO:0006260|GO:0006281 SRM_RS05700 882f84d8667b724cb2d04d78cf277b09 691 ProSitePatterns PS01055 NAD-dependent DNA ligase signature 1. 131 160 - T 22-04-2016 IPR018239 NAD-dependent DNA ligase, active site SRM_RS05700 882f84d8667b724cb2d04d78cf277b09 691 Gene3D G3DSA:3.40.50.10190 609 686 7.7E-21 T 22-04-2016 IPR001357 BRCT domain SRM_RS05700 882f84d8667b724cb2d04d78cf277b09 691 Pfam PF12826 Helix-hairpin-helix motif 528 591 8.1E-24 T 22-04-2016 SRM_RS05700 882f84d8667b724cb2d04d78cf277b09 691 SUPERFAMILY SSF52113 610 685 5.79E-16 T 22-04-2016 IPR001357 BRCT domain SRM_RS05700 882f84d8667b724cb2d04d78cf277b09 691 SUPERFAMILY SSF50249 336 417 3.43E-26 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold SRM_RS05700 882f84d8667b724cb2d04d78cf277b09 691 Pfam PF03119 NAD-dependent DNA ligase C4 zinc finger domain 426 452 1.2E-6 T 22-04-2016 IPR004149 Zinc-finger, NAD-dependent DNA ligase C4-type GO:0003911|GO:0006260|GO:0006281 SRM_RS05700 882f84d8667b724cb2d04d78cf277b09 691 SMART SM00292 609 686 1.8E-10 T 22-04-2016 IPR001357 BRCT domain SRM_RS05700 882f84d8667b724cb2d04d78cf277b09 691 TIGRFAM TIGR00575 dnlj: DNA ligase, NAD-dependent 28 679 1.0E-240 T 22-04-2016 IPR001679 NAD-dependent DNA ligase GO:0003911|GO:0006260|GO:0006281 SRM_RS05700 882f84d8667b724cb2d04d78cf277b09 691 Hamap MF_01588 DNA ligase [ligA]. 18 683 51.727 T 22-04-2016 IPR001679 NAD-dependent DNA ligase GO:0003911|GO:0006260|GO:0006281 SRM_RS11205 b92682182e8a5c4cab81372314c958fa 627 TIGRFAM TIGR00924 yjdL_sub1_fam: amino acid/peptide transporter (Peptide:H+ symporter) 19 278 5.2E-70 T 22-04-2016 IPR005279 Dipeptide/tripeptide permease GO:0015197|GO:0015833|GO:0016020 SRM_RS11205 b92682182e8a5c4cab81372314c958fa 627 Gene3D G3DSA:1.20.1250.20 476 618 3.0E-7 T 22-04-2016 SRM_RS11205 b92682182e8a5c4cab81372314c958fa 627 Gene3D G3DSA:1.20.1250.20 33 216 7.9E-17 T 22-04-2016 SRM_RS11205 b92682182e8a5c4cab81372314c958fa 627 PANTHER PTHR11654:SF119 342 396 6.0E-141 T 22-04-2016 SRM_RS11205 b92682182e8a5c4cab81372314c958fa 627 PANTHER PTHR11654:SF119 459 592 6.0E-141 T 22-04-2016 SRM_RS11205 b92682182e8a5c4cab81372314c958fa 627 PANTHER PTHR11654:SF119 20 242 6.0E-141 T 22-04-2016 SRM_RS11205 b92682182e8a5c4cab81372314c958fa 627 PANTHER PTHR11654 342 396 6.0E-141 T 22-04-2016 IPR000109 Proton-dependent oligopeptide transporter family GO:0005215|GO:0006810|GO:0016020 Reactome: REACT_15518|Reactome: REACT_19419 SRM_RS11205 b92682182e8a5c4cab81372314c958fa 627 PANTHER PTHR11654 459 592 6.0E-141 T 22-04-2016 IPR000109 Proton-dependent oligopeptide transporter family GO:0005215|GO:0006810|GO:0016020 Reactome: REACT_15518|Reactome: REACT_19419 SRM_RS11205 b92682182e8a5c4cab81372314c958fa 627 PANTHER PTHR11654 20 242 6.0E-141 T 22-04-2016 IPR000109 Proton-dependent oligopeptide transporter family GO:0005215|GO:0006810|GO:0016020 Reactome: REACT_15518|Reactome: REACT_19419 SRM_RS11205 b92682182e8a5c4cab81372314c958fa 627 SUPERFAMILY SSF103473 23 340 1.23E-23 T 22-04-2016 IPR020846 Major facilitator superfamily domain SRM_RS11205 b92682182e8a5c4cab81372314c958fa 627 SUPERFAMILY SSF103473 475 616 2.09E-8 T 22-04-2016 IPR020846 Major facilitator superfamily domain SRM_RS11205 b92682182e8a5c4cab81372314c958fa 627 Pfam PF00854 POT family 105 415 5.1E-36 T 22-04-2016 IPR000109 Proton-dependent oligopeptide transporter family GO:0005215|GO:0006810|GO:0016020 Reactome: REACT_15518|Reactome: REACT_19419 SRM_RS11205 b92682182e8a5c4cab81372314c958fa 627 Pfam PF00854 POT family 453 591 9.1E-21 T 22-04-2016 IPR000109 Proton-dependent oligopeptide transporter family GO:0005215|GO:0006810|GO:0016020 Reactome: REACT_15518|Reactome: REACT_19419 SRM_RS08815 ce5ac5854eeab6a19edaf87d286401f1 346 SMART SM00354 13 83 1.0E-29 T 22-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 SRM_RS08815 ce5ac5854eeab6a19edaf87d286401f1 346 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 15 25 5.8E-5 T 22-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 SRM_RS08815 ce5ac5854eeab6a19edaf87d286401f1 346 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 25 35 5.8E-5 T 22-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 SRM_RS08815 ce5ac5854eeab6a19edaf87d286401f1 346 Pfam PF00356 Bacterial regulatory proteins, lacI family 15 60 2.8E-18 T 22-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 SRM_RS08815 ce5ac5854eeab6a19edaf87d286401f1 346 PANTHER PTHR30146 13 346 3.1E-93 T 22-04-2016 SRM_RS08815 ce5ac5854eeab6a19edaf87d286401f1 346 Gene3D G3DSA:3.40.50.2300 67 183 4.5E-28 T 22-04-2016 SRM_RS08815 ce5ac5854eeab6a19edaf87d286401f1 346 Gene3D G3DSA:1.10.260.40 14 66 1.9E-23 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 SRM_RS08815 ce5ac5854eeab6a19edaf87d286401f1 346 SUPERFAMILY SSF47413 13 71 4.82E-17 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 SRM_RS08815 ce5ac5854eeab6a19edaf87d286401f1 346 Pfam PF13377 Periplasmic binding protein-like domain 177 343 7.3E-28 T 22-04-2016 SRM_RS08815 ce5ac5854eeab6a19edaf87d286401f1 346 Gene3D G3DSA:3.40.50.2300 184 322 3.2E-43 T 22-04-2016 SRM_RS08815 ce5ac5854eeab6a19edaf87d286401f1 346 SUPERFAMILY SSF53822 72 344 3.93E-58 T 22-04-2016 IPR028082 Periplasmic binding protein-like I SRM_RS15765 bd60e08608231446cd015cacf9113856 317 SUPERFAMILY SSF56219 42 305 6.02E-32 T 22-04-2016 IPR005135 Endonuclease/exonuclease/phosphatase SRM_RS15765 bd60e08608231446cd015cacf9113856 317 Pfam PF03372 Endonuclease/Exonuclease/phosphatase family 48 301 3.0E-16 T 22-04-2016 IPR005135 Endonuclease/exonuclease/phosphatase SRM_RS15765 bd60e08608231446cd015cacf9113856 317 Gene3D G3DSA:3.60.10.10 43 307 3.6E-20 T 22-04-2016 IPR005135 Endonuclease/exonuclease/phosphatase SRM_RS15765 bd60e08608231446cd015cacf9113856 317 PANTHER PTHR41349 21 317 4.3E-27 T 22-04-2016 SRM_RS07525 0edce5e9a5c830f89c3f8a8bb59b74da 970 Pfam PF02347 Glycine cleavage system P-protein 463 745 2.6E-10 T 22-04-2016 IPR020580 Glycine cleavage system P-protein, N-terminal GO:0004375|GO:0006546|GO:0055114 KEGG: 00260+1.4.4.2 SRM_RS07525 0edce5e9a5c830f89c3f8a8bb59b74da 970 Pfam PF02347 Glycine cleavage system P-protein 13 439 1.4E-181 T 22-04-2016 IPR020580 Glycine cleavage system P-protein, N-terminal GO:0004375|GO:0006546|GO:0055114 KEGG: 00260+1.4.4.2 SRM_RS07525 0edce5e9a5c830f89c3f8a8bb59b74da 970 Gene3D G3DSA:3.40.640.10 501 750 7.0E-41 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 SRM_RS07525 0edce5e9a5c830f89c3f8a8bb59b74da 970 Gene3D G3DSA:3.40.640.10 89 302 2.4E-16 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 SRM_RS07525 0edce5e9a5c830f89c3f8a8bb59b74da 970 Hamap MF_00711 Glycine dehydrogenase (decarboxylating) [gcvP]. 5 955 24.076 T 22-04-2016 IPR003437 Glycine dehydrogenase (decarboxylating) GO:0004375|GO:0006544|GO:0055114 KEGG: 00260+1.4.4.2 SRM_RS07525 0edce5e9a5c830f89c3f8a8bb59b74da 970 PANTHER PTHR11773 5 966 0.0 T 22-04-2016 IPR020581 Glycine cleavage system P protein GO:0004375|GO:0006546|GO:0055114 KEGG: 00260+1.4.4.2 SRM_RS07525 0edce5e9a5c830f89c3f8a8bb59b74da 970 PANTHER PTHR11773:SF1 5 966 0.0 T 22-04-2016 SRM_RS07525 0edce5e9a5c830f89c3f8a8bb59b74da 970 SUPERFAMILY SSF53383 472 885 1.65E-100 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase SRM_RS07525 0edce5e9a5c830f89c3f8a8bb59b74da 970 SUPERFAMILY SSF53383 928 951 1.65E-100 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase SRM_RS07525 0edce5e9a5c830f89c3f8a8bb59b74da 970 SUPERFAMILY SSF53383 14 438 5.32E-99 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase SRM_RS07525 0edce5e9a5c830f89c3f8a8bb59b74da 970 TIGRFAM TIGR00461 gcvP: glycine dehydrogenase 14 949 0.0 T 22-04-2016 IPR003437 Glycine dehydrogenase (decarboxylating) GO:0004375|GO:0006544|GO:0055114 KEGG: 00260+1.4.4.2 SRM_RS10405 77a06b0fe5d063f63ec160b588bf1405 113 SUPERFAMILY SSF54909 3 98 4.24E-23 T 22-04-2016 IPR011008 Dimeric alpha-beta barrel SRM_RS10405 77a06b0fe5d063f63ec160b588bf1405 113 Gene3D G3DSA:3.30.70.900 2 92 1.7E-16 T 22-04-2016 SRM_RS10405 77a06b0fe5d063f63ec160b588bf1405 113 Pfam PF03992 Antibiotic biosynthesis monooxygenase 3 73 3.7E-15 T 22-04-2016 IPR007138 Antibiotic biosynthesis monooxygenase domain SRM_RS08665 eca6b7b3bbeae3d851eb686150267b00 643 SMART SM00433 34 636 6.8E-252 T 22-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 SRM_RS08665 eca6b7b3bbeae3d851eb686150267b00 643 PANTHER PTHR10169 1 643 4.4E-214 T 22-04-2016 SRM_RS08665 eca6b7b3bbeae3d851eb686150267b00 643 PANTHER PTHR10169:SF20 1 643 4.4E-214 T 22-04-2016 SRM_RS08665 eca6b7b3bbeae3d851eb686150267b00 643 PRINTS PR00418 DNA topoisomerase II family signature 528 540 2.7E-66 T 22-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 SRM_RS08665 eca6b7b3bbeae3d851eb686150267b00 643 PRINTS PR00418 DNA topoisomerase II family signature 272 285 2.7E-66 T 22-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 SRM_RS08665 eca6b7b3bbeae3d851eb686150267b00 643 PRINTS PR00418 DNA topoisomerase II family signature 113 127 2.7E-66 T 22-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 SRM_RS08665 eca6b7b3bbeae3d851eb686150267b00 643 PRINTS PR00418 DNA topoisomerase II family signature 573 589 2.7E-66 T 22-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 SRM_RS08665 eca6b7b3bbeae3d851eb686150267b00 643 PRINTS PR00418 DNA topoisomerase II family signature 34 49 2.7E-66 T 22-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 SRM_RS08665 eca6b7b3bbeae3d851eb686150267b00 643 PRINTS PR00418 DNA topoisomerase II family signature 508 525 2.7E-66 T 22-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 SRM_RS08665 eca6b7b3bbeae3d851eb686150267b00 643 PRINTS PR00418 DNA topoisomerase II family signature 490 506 2.7E-66 T 22-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 SRM_RS08665 eca6b7b3bbeae3d851eb686150267b00 643 PRINTS PR00418 DNA topoisomerase II family signature 70 83 2.7E-66 T 22-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 SRM_RS08665 eca6b7b3bbeae3d851eb686150267b00 643 PRINTS PR00418 DNA topoisomerase II family signature 424 438 2.7E-66 T 22-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 SRM_RS08665 eca6b7b3bbeae3d851eb686150267b00 643 Pfam PF00986 DNA gyrase B subunit, carboxyl terminus 570 631 2.0E-21 T 22-04-2016 IPR002288 DNA gyrase B subunit, C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 SRM_RS08665 eca6b7b3bbeae3d851eb686150267b00 643 PRINTS PR01159 DNA gyrase subunit B signature 5 15 4.1E-24 T 22-04-2016 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 SRM_RS08665 eca6b7b3bbeae3d851eb686150267b00 643 PRINTS PR01159 DNA gyrase subunit B signature 220 242 4.1E-24 T 22-04-2016 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 SRM_RS08665 eca6b7b3bbeae3d851eb686150267b00 643 PRINTS PR01159 DNA gyrase subunit B signature 196 209 4.1E-24 T 22-04-2016 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 SRM_RS08665 eca6b7b3bbeae3d851eb686150267b00 643 PRINTS PR01159 DNA gyrase subunit B signature 246 264 4.1E-24 T 22-04-2016 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 SRM_RS08665 eca6b7b3bbeae3d851eb686150267b00 643 PRINTS PR01159 DNA gyrase subunit B signature 377 397 4.1E-24 T 22-04-2016 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 SRM_RS08665 eca6b7b3bbeae3d851eb686150267b00 643 PRINTS PR01159 DNA gyrase subunit B signature 315 331 4.1E-24 T 22-04-2016 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 SRM_RS08665 eca6b7b3bbeae3d851eb686150267b00 643 PRINTS PR01159 DNA gyrase subunit B signature 594 606 4.1E-24 T 22-04-2016 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 SRM_RS08665 eca6b7b3bbeae3d851eb686150267b00 643 PRINTS PR01159 DNA gyrase subunit B signature 474 483 4.1E-24 T 22-04-2016 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 SRM_RS08665 eca6b7b3bbeae3d851eb686150267b00 643 SUPERFAMILY SSF56719 401 636 2.59E-76 T 22-04-2016 IPR013760 DNA topoisomerase, type IIA-like domain GO:0003918|GO:0005524 SRM_RS08665 eca6b7b3bbeae3d851eb686150267b00 643 Pfam PF00204 DNA gyrase B 221 391 7.2E-50 T 22-04-2016 IPR013506 DNA topoisomerase, type IIA, subunit B, domain 2 GO:0003677|GO:0003918|GO:0005524|GO:0006265 SRM_RS08665 eca6b7b3bbeae3d851eb686150267b00 643 Gene3D G3DSA:3.30.230.10 220 391 2.8E-48 T 22-04-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup SRM_RS08665 eca6b7b3bbeae3d851eb686150267b00 643 ProSitePatterns PS00177 DNA topoisomerase II signature. 426 434 - T 22-04-2016 IPR018522 DNA topoisomerase, type IIA, conserved site GO:0003677|GO:0003918|GO:0005524|GO:0006265 SRM_RS08665 eca6b7b3bbeae3d851eb686150267b00 643 Pfam PF01751 Toprim domain 423 533 1.9E-17 T 22-04-2016 IPR006171 Toprim domain SRM_RS08665 eca6b7b3bbeae3d851eb686150267b00 643 SUPERFAMILY SSF55874 5 214 3.93E-65 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SRM_RS08665 eca6b7b3bbeae3d851eb686150267b00 643 SMART SM00387 30 176 6.3E-25 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SRM_RS08665 eca6b7b3bbeae3d851eb686150267b00 643 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 33 175 4.1E-24 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SRM_RS08665 eca6b7b3bbeae3d851eb686150267b00 643 SUPERFAMILY SSF54211 221 391 2.09E-41 T 22-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold SRM_RS08665 eca6b7b3bbeae3d851eb686150267b00 643 Gene3D G3DSA:3.40.50.670 408 623 1.3E-79 T 22-04-2016 IPR013759 DNA topoisomerase, type IIA, central domain GO:0003677|GO:0003918|GO:0005524|GO:0006265 SRM_RS08665 eca6b7b3bbeae3d851eb686150267b00 643 Gene3D G3DSA:3.30.565.10 5 217 5.9E-80 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SRM_RS07875 9adbd2fb7c76df59e68ee5b2fb7ec90d 397 Gene3D G3DSA:3.90.1150.10 277 394 1.2E-22 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 SRM_RS07875 9adbd2fb7c76df59e68ee5b2fb7ec90d 397 Gene3D G3DSA:3.40.640.10 45 276 4.5E-68 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 SRM_RS07875 9adbd2fb7c76df59e68ee5b2fb7ec90d 397 SUPERFAMILY SSF53383 10 395 1.75E-97 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase SRM_RS07875 9adbd2fb7c76df59e68ee5b2fb7ec90d 397 Pfam PF00155 Aminotransferase class I and II 32 391 3.4E-56 T 22-04-2016 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 SRM_RS07875 9adbd2fb7c76df59e68ee5b2fb7ec90d 397 PANTHER PTHR11751 29 393 2.1E-98 T 22-04-2016 SRM_RS07875 9adbd2fb7c76df59e68ee5b2fb7ec90d 397 ProSitePatterns PS00105 Aminotransferases class-I pyridoxal-phosphate attachment site. 234 247 - T 22-04-2016 IPR004838 Aminotransferases, class-I, pyridoxal-phosphate-binding site GO:0003824|GO:0009058|GO:0030170 Reactome: REACT_13 SRM_RS15660 482c28edb9d9d5d74ea63affc95d96b6 1028 Pfam PF07715 TonB-dependent Receptor Plug Domain 124 236 3.8E-24 T 22-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 SRM_RS15660 482c28edb9d9d5d74ea63affc95d96b6 1028 TIGRFAM TIGR04057 SusC_RagA_signa: TonB-dependent outer membrane receptor, SusC/RagA subfamily, signature region 212 242 2.5E-16 T 22-04-2016 IPR023997 TonB-dependent outer membrane protein SusC/RagA, conserved site UniPathway: UPA00153 SRM_RS15660 482c28edb9d9d5d74ea63affc95d96b6 1028 SUPERFAMILY SSF56935 111 260 1.54E-106 T 22-04-2016 SRM_RS15660 482c28edb9d9d5d74ea63affc95d96b6 1028 SUPERFAMILY SSF56935 934 1028 1.54E-106 T 22-04-2016 SRM_RS15660 482c28edb9d9d5d74ea63affc95d96b6 1028 SUPERFAMILY SSF56935 309 397 1.54E-106 T 22-04-2016 SRM_RS15660 482c28edb9d9d5d74ea63affc95d96b6 1028 SUPERFAMILY SSF56935 853 897 1.54E-106 T 22-04-2016 SRM_RS15660 482c28edb9d9d5d74ea63affc95d96b6 1028 SUPERFAMILY SSF56935 428 771 1.54E-106 T 22-04-2016 SRM_RS15660 482c28edb9d9d5d74ea63affc95d96b6 1028 Gene3D G3DSA:2.60.40.1120 27 105 4.3E-22 T 22-04-2016 IPR014766 Carboxypeptidase, regulatory domain SRM_RS15660 482c28edb9d9d5d74ea63affc95d96b6 1028 TIGRFAM TIGR04056 OMP_RagA_SusC: TonB-linked outer membrane protein, SusC/RagA family 27 1028 5.0E-267 T 22-04-2016 IPR023996 TonB-dependent outer membrane protein, SusC/RagA UniPathway: UPA00153 SRM_RS15660 482c28edb9d9d5d74ea63affc95d96b6 1028 SUPERFAMILY SSF49452 22 104 6.28E-20 T 22-04-2016 IPR013784 Carbohydrate-binding-like fold GO:0030246 SRM_RS15660 482c28edb9d9d5d74ea63affc95d96b6 1028 Pfam PF13715 CarboxypepD_reg-like domain 28 115 4.6E-24 T 22-04-2016 SRM_RS15660 482c28edb9d9d5d74ea63affc95d96b6 1028 PANTHER PTHR11532 501 1026 2.1E-257 T 22-04-2016 SRM_RS15660 482c28edb9d9d5d74ea63affc95d96b6 1028 PANTHER PTHR11532 4 425 2.1E-257 T 22-04-2016 SRM_RS15660 482c28edb9d9d5d74ea63affc95d96b6 1028 Gene3D G3DSA:2.170.130.10 112 235 1.5E-25 T 22-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 SRM_RS15660 482c28edb9d9d5d74ea63affc95d96b6 1028 PANTHER PTHR11532:SF57 501 1026 2.1E-257 T 22-04-2016 SRM_RS15660 482c28edb9d9d5d74ea63affc95d96b6 1028 PANTHER PTHR11532:SF57 4 425 2.1E-257 T 22-04-2016 SRM_RS15660 482c28edb9d9d5d74ea63affc95d96b6 1028 Gene3D G3DSA:2.40.170.20 925 1028 1.2E-60 T 22-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 SRM_RS15660 482c28edb9d9d5d74ea63affc95d96b6 1028 Gene3D G3DSA:2.40.170.20 236 256 1.2E-60 T 22-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 SRM_RS15660 482c28edb9d9d5d74ea63affc95d96b6 1028 Gene3D G3DSA:2.40.170.20 318 788 1.2E-60 T 22-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 SRM_RS15660 482c28edb9d9d5d74ea63affc95d96b6 1028 Gene3D G3DSA:2.40.170.20 862 887 1.2E-60 T 22-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 SRM_RS07475 69698794772a14c4cb4cc7b3dca07c2d 278 Gene3D G3DSA:3.60.21.10 8 125 4.3E-32 T 22-04-2016 IPR029052 Metallo-dependent phosphatase-like SRM_RS07475 69698794772a14c4cb4cc7b3dca07c2d 278 Gene3D G3DSA:3.60.21.10 186 241 4.3E-32 T 22-04-2016 IPR029052 Metallo-dependent phosphatase-like SRM_RS07475 69698794772a14c4cb4cc7b3dca07c2d 278 Pfam PF12850 Calcineurin-like phosphoesterase superfamily domain 10 220 6.4E-12 T 22-04-2016 IPR024654 Calcineurin-like phosphoesterase domain, lpxH type SRM_RS07475 69698794772a14c4cb4cc7b3dca07c2d 278 PANTHER PTHR34990:SF2 3 242 4.5E-102 T 22-04-2016 SRM_RS07475 69698794772a14c4cb4cc7b3dca07c2d 278 SUPERFAMILY SSF56300 7 127 6.08E-30 T 22-04-2016 IPR029052 Metallo-dependent phosphatase-like SRM_RS07475 69698794772a14c4cb4cc7b3dca07c2d 278 SUPERFAMILY SSF56300 182 240 6.08E-30 T 22-04-2016 IPR029052 Metallo-dependent phosphatase-like SRM_RS07475 69698794772a14c4cb4cc7b3dca07c2d 278 PANTHER PTHR34990 3 242 4.5E-102 T 22-04-2016 SRM_RS01570 7fad92ba6869eb0df5ce94f4288855c0 320 SUPERFAMILY SSF82282 3 312 1.06E-78 T 22-04-2016 IPR003726 Homocysteine-binding domain SRM_RS01570 7fad92ba6869eb0df5ce94f4288855c0 320 PANTHER PTHR11103 12 310 9.1E-59 T 22-04-2016 SRM_RS01570 7fad92ba6869eb0df5ce94f4288855c0 320 Pfam PF02574 Homocysteine S-methyltransferase 14 308 3.7E-58 T 22-04-2016 IPR003726 Homocysteine-binding domain SRM_RS01570 7fad92ba6869eb0df5ce94f4288855c0 320 PANTHER PTHR11103:SF7 12 310 9.1E-59 T 22-04-2016 SRM_RS01570 7fad92ba6869eb0df5ce94f4288855c0 320 Gene3D G3DSA:3.20.20.330 2 317 7.2E-80 T 22-04-2016 IPR003726 Homocysteine-binding domain SRM_RS06380 8efd741b34e3f354f91445327dc6cd70 106 SMART SM01234 19 86 3.5E-41 T 22-04-2016 IPR002696 Putative membrane protein insertion efficiency factor SRM_RS06380 8efd741b34e3f354f91445327dc6cd70 106 Pfam PF01809 Haemolytic domain 22 85 6.8E-29 T 22-04-2016 IPR002696 Putative membrane protein insertion efficiency factor SRM_RS06380 8efd741b34e3f354f91445327dc6cd70 106 Hamap MF_00386 Putative membrane protein insertion efficiency factor [yidD]. 19 87 22.169 T 22-04-2016 IPR002696 Putative membrane protein insertion efficiency factor SRM_RS06380 8efd741b34e3f354f91445327dc6cd70 106 TIGRFAM TIGR00278 TIGR00278: putative membrane protein insertion efficiency factor 23 86 2.8E-23 T 22-04-2016 IPR002696 Putative membrane protein insertion efficiency factor SRM_RS06380 8efd741b34e3f354f91445327dc6cd70 106 ProDom PD004225 UPF0161 ALPHA-HEMOLYSIN YIDD UNCHARACTERIZED CYTOSOLIC PRECURSOR SIGNAL YTJA RNPA SIMILAR 35 85 2.0E-14 T 22-04-2016 IPR002696 Putative membrane protein insertion efficiency factor SRM_RS06380 8efd741b34e3f354f91445327dc6cd70 106 PANTHER PTHR33383 22 92 1.4E-39 T 22-04-2016 SRM_RS15210 1d76fae926b0150c273565a93a29260d 419 TIGRFAM TIGR03150 fabF: beta-ketoacyl-acyl-carrier-protein synthase II 6 415 3.1E-187 T 22-04-2016 IPR017568 3-oxoacyl-[acyl-carrier-protein] synthase 2 GO:0006633|GO:0016747 UniPathway: UPA00094 SRM_RS15210 1d76fae926b0150c273565a93a29260d 419 Gene3D G3DSA:3.40.47.10 6 263 1.8E-76 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 SRM_RS15210 1d76fae926b0150c273565a93a29260d 419 Gene3D G3DSA:3.40.47.10 268 418 3.6E-62 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 SRM_RS15210 1d76fae926b0150c273565a93a29260d 419 PIRSF PIRSF000447 3 419 5.8E-175 T 22-04-2016 IPR017568 3-oxoacyl-[acyl-carrier-protein] synthase 2 GO:0006633|GO:0016747 UniPathway: UPA00094 SRM_RS15210 1d76fae926b0150c273565a93a29260d 419 Pfam PF02801 Beta-ketoacyl synthase, C-terminal domain 260 374 1.8E-40 T 22-04-2016 IPR014031 Beta-ketoacyl synthase, C-terminal SRM_RS15210 1d76fae926b0150c273565a93a29260d 419 SUPERFAMILY SSF53901 6 257 2.33E-76 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 SRM_RS15210 1d76fae926b0150c273565a93a29260d 419 SUPERFAMILY SSF53901 219 417 5.47E-73 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 SRM_RS15210 1d76fae926b0150c273565a93a29260d 419 Pfam PF00109 Beta-ketoacyl synthase, N-terminal domain 6 252 8.1E-60 T 22-04-2016 IPR014030 Beta-ketoacyl synthase, N-terminal SRM_RS15210 1d76fae926b0150c273565a93a29260d 419 SMART SM00825 Beta-ketoacyl synthase 8 419 2.1E-17 T 22-04-2016 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain SRM_RS15210 1d76fae926b0150c273565a93a29260d 419 PANTHER PTHR11712 6 417 5.3E-203 T 22-04-2016 SRM_RS15210 1d76fae926b0150c273565a93a29260d 419 ProSitePatterns PS00606 Beta-ketoacyl synthases active site. 160 176 - T 22-04-2016 IPR018201 Beta-ketoacyl synthase, active site SRM_RS13565 5b55d2f281931434b03494d8cafc411f 500 SMART SM00382 149 362 5.5E-7 T 22-04-2016 IPR003593 AAA+ ATPase domain SRM_RS13565 5b55d2f281931434b03494d8cafc411f 500 PANTHER PTHR15184:SF8 1 207 4.1E-293 T 22-04-2016 SRM_RS13565 5b55d2f281931434b03494d8cafc411f 500 PANTHER PTHR15184:SF8 231 500 4.1E-293 T 22-04-2016 SRM_RS13565 5b55d2f281931434b03494d8cafc411f 500 SUPERFAMILY SSF50615 9 82 2.88E-23 T 22-04-2016 IPR004100 ATPase, F1 complex alpha/beta subunit, N-terminal domain GO:0015992|GO:0046034 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 SRM_RS13565 5b55d2f281931434b03494d8cafc411f 500 SUPERFAMILY SSF47917 381 496 1.02E-49 T 22-04-2016 IPR000793 ATPase, F1/V1/A1 complex, alpha/beta subunit, C-terminal GO:0015991|GO:0016820|GO:0033178 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 SRM_RS13565 5b55d2f281931434b03494d8cafc411f 500 ProSitePatterns PS00152 ATP synthase alpha and beta subunits signature. 369 378 - T 22-04-2016 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 SRM_RS13565 5b55d2f281931434b03494d8cafc411f 500 SUPERFAMILY SSF52540 84 208 2.65E-84 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SRM_RS13565 5b55d2f281931434b03494d8cafc411f 500 SUPERFAMILY SSF52540 237 382 2.65E-84 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SRM_RS13565 5b55d2f281931434b03494d8cafc411f 500 Pfam PF02874 ATP synthase alpha/beta family, beta-barrel domain 12 79 1.1E-20 T 22-04-2016 IPR004100 ATPase, F1 complex alpha/beta subunit, N-terminal domain GO:0015992|GO:0046034 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 SRM_RS13565 5b55d2f281931434b03494d8cafc411f 500 Gene3D G3DSA:3.40.50.300 83 379 2.1E-101 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SRM_RS13565 5b55d2f281931434b03494d8cafc411f 500 Hamap MF_01347 ATP synthase subunit beta [atpB]. 7 496 56.282 T 22-04-2016 IPR005722 ATPase, F1 complex, beta subunit GO:0015986|GO:0046933 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 SRM_RS13565 5b55d2f281931434b03494d8cafc411f 500 PANTHER PTHR15184 1 207 4.1E-293 T 22-04-2016 SRM_RS13565 5b55d2f281931434b03494d8cafc411f 500 PANTHER PTHR15184 231 500 4.1E-293 T 22-04-2016 SRM_RS13565 5b55d2f281931434b03494d8cafc411f 500 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 137 378 5.2E-59 T 22-04-2016 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 SRM_RS13565 5b55d2f281931434b03494d8cafc411f 500 Gene3D G3DSA:1.10.1140.10 382 499 1.9E-52 T 22-04-2016 IPR024034 ATPase, F1 complex beta subunit/V1 complex, C-terminal KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 SRM_RS13565 5b55d2f281931434b03494d8cafc411f 500 Gene3D G3DSA:2.40.10.170 5 82 6.8E-29 T 22-04-2016 SRM_RS13565 5b55d2f281931434b03494d8cafc411f 500 TIGRFAM TIGR01039 atpD: ATP synthase F1, beta subunit 9 496 5.1E-232 T 22-04-2016 IPR005722 ATPase, F1 complex, beta subunit GO:0015986|GO:0046933 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 SRM_RS08895 623b709d812c5bf0bf00f2d84d0bc442 666 ProSitePatterns PS01175 Ribonuclease II family signature. 508 532 - T 22-04-2016 IPR022966 Ribonuclease II/R, conserved site SRM_RS08895 623b709d812c5bf0bf00f2d84d0bc442 666 SUPERFAMILY SSF50249 164 583 5.14E-141 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold SRM_RS08895 623b709d812c5bf0bf00f2d84d0bc442 666 TIGRFAM TIGR00358 3_prime_RNase: VacB and RNase II family 3'-5' exoribonucleases 13 663 4.6E-173 T 22-04-2016 IPR004476 Ribonuclease II/ribonuclease R GO:0003723|GO:0004540|GO:0016070 SRM_RS08895 623b709d812c5bf0bf00f2d84d0bc442 666 PANTHER PTHR23355 29 666 4.3E-225 T 22-04-2016 SRM_RS08895 623b709d812c5bf0bf00f2d84d0bc442 666 Gene3D G3DSA:2.40.50.140 585 662 5.2E-18 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold SRM_RS08895 623b709d812c5bf0bf00f2d84d0bc442 666 SUPERFAMILY SSF50249 81 180 9.66E-15 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold SRM_RS08895 623b709d812c5bf0bf00f2d84d0bc442 666 PANTHER PTHR23355:SF9 29 666 4.3E-225 T 22-04-2016 SRM_RS08895 623b709d812c5bf0bf00f2d84d0bc442 666 Pfam PF00575 S1 RNA binding domain 584 662 6.8E-12 T 22-04-2016 IPR003029 S1 domain GO:0003676 SRM_RS08895 623b709d812c5bf0bf00f2d84d0bc442 666 Pfam PF00773 RNB domain 203 539 9.7E-109 T 22-04-2016 SRM_RS08895 623b709d812c5bf0bf00f2d84d0bc442 666 SMART SM00316 583 665 6.1E-15 T 22-04-2016 IPR022967 RNA-binding domain, S1 SRM_RS08895 623b709d812c5bf0bf00f2d84d0bc442 666 Pfam PF08206 Ribonuclease B OB domain 29 87 8.4E-14 T 22-04-2016 IPR013223 Ribonuclease B, N-terminal OB domain SRM_RS08895 623b709d812c5bf0bf00f2d84d0bc442 666 Pfam PF08206 Ribonuclease B OB domain 101 156 1.9E-8 T 22-04-2016 IPR013223 Ribonuclease B, N-terminal OB domain SRM_RS08895 623b709d812c5bf0bf00f2d84d0bc442 666 TIGRFAM TIGR02063 RNase_R: ribonuclease R 2 665 1.3E-225 T 22-04-2016 IPR011805 Ribonuclease R GO:0003723|GO:0004518 SRM_RS08895 623b709d812c5bf0bf00f2d84d0bc442 666 Hamap MF_01895 Ribonuclease R [rnr]. 7 665 57.013 T 22-04-2016 IPR011805 Ribonuclease R GO:0003723|GO:0004518 SRM_RS08895 623b709d812c5bf0bf00f2d84d0bc442 666 SMART SM00357 93 157 0.21 T 22-04-2016 IPR011129 Cold shock protein GO:0003676 SRM_RS08895 623b709d812c5bf0bf00f2d84d0bc442 666 SMART SM00357 28 88 1.2E-4 T 22-04-2016 IPR011129 Cold shock protein GO:0003676 SRM_RS08895 623b709d812c5bf0bf00f2d84d0bc442 666 SUPERFAMILY SSF50249 10 90 9.22E-14 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold SRM_RS08895 623b709d812c5bf0bf00f2d84d0bc442 666 SMART SM00955 203 541 5.5E-166 T 22-04-2016 SRM_RS08895 623b709d812c5bf0bf00f2d84d0bc442 666 SUPERFAMILY SSF50249 585 664 1.86E-20 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold SRM_RS09860 de346e79eb5d74586ec0631d43cedc88 468 Hamap MF_01161 tRNA(Ile)-lysidine synthase [tilS]. 15 319 22.519 T 22-04-2016 IPR012094 tRNA(Ile)-lysidine synthase GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 SRM_RS09860 de346e79eb5d74586ec0631d43cedc88 468 Pfam PF01171 PP-loop family 24 207 1.4E-46 T 22-04-2016 IPR011063 tRNA(Ile)-lysidine/2-thiocytidine synthase, N-terminal SRM_RS09860 de346e79eb5d74586ec0631d43cedc88 468 Gene3D G3DSA:3.40.50.620 15 190 4.8E-25 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold SRM_RS09860 de346e79eb5d74586ec0631d43cedc88 468 PANTHER PTHR11807 7 464 9.2E-75 T 22-04-2016 SRM_RS09860 de346e79eb5d74586ec0631d43cedc88 468 SUPERFAMILY SSF52402 16 234 6.08E-58 T 22-04-2016 SRM_RS09860 de346e79eb5d74586ec0631d43cedc88 468 TIGRFAM TIGR02432 lysidine_TilS_N: tRNA(Ile)-lysidine synthetase 24 211 7.2E-50 T 22-04-2016 IPR012795 tRNA(Ile)-lysidine synthase, N-terminal GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 SRM_RS09860 de346e79eb5d74586ec0631d43cedc88 468 SUPERFAMILY SSF56037 340 451 3.14E-15 T 22-04-2016 IPR020825 Phenylalanyl-tRNA synthetase, B3/B4 SRM_RS09860 de346e79eb5d74586ec0631d43cedc88 468 Pfam PF09179 TilS substrate binding domain 260 324 3.1E-5 T 22-04-2016 IPR015262 tRNA(Ile)-lysidine synthase , substrate-binding domain GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 SRM_RS09860 de346e79eb5d74586ec0631d43cedc88 468 TIGRFAM TIGR02433 lysidine_TilS_C: tRNA(Ile)-lysidine synthetase, C-terminal domain 385 431 8.6E-11 T 22-04-2016 IPR012796 Lysidine-tRNA(Ile) synthetase, C-terminal GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 SRM_RS09860 de346e79eb5d74586ec0631d43cedc88 468 PANTHER PTHR11807:SF2 7 464 9.2E-75 T 22-04-2016 IPR012094 tRNA(Ile)-lysidine synthase GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 SRM_RS09860 de346e79eb5d74586ec0631d43cedc88 468 Pfam PF11734 TilS substrate C-terminal domain 385 449 1.1E-11 T 22-04-2016 IPR012796 Lysidine-tRNA(Ile) synthetase, C-terminal GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 SRM_RS09860 de346e79eb5d74586ec0631d43cedc88 468 SMART SM00977 385 459 2.7E-20 T 22-04-2016 IPR012796 Lysidine-tRNA(Ile) synthetase, C-terminal GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 SRM_RS07050 44aed9f153b7d52a89e4e3ab5b044fd2 526 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 182 496 2.6E-27 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SRM_RS07050 44aed9f153b7d52a89e4e3ab5b044fd2 526 TIGRFAM TIGR01317 GOGAT_sm_gam: glutamate synthase, NADH/NADPH, small subunit 41 514 1.4E-182 T 22-04-2016 IPR006005 Glutamate synthase, NADH/NADPH, small subunit 1 GO:0006537|GO:0016639|GO:0055114 SRM_RS07050 44aed9f153b7d52a89e4e3ab5b044fd2 526 PRINTS PR00419 Adrenodoxin reductase family signature 206 219 1.6E-23 T 22-04-2016 SRM_RS07050 44aed9f153b7d52a89e4e3ab5b044fd2 526 PRINTS PR00419 Adrenodoxin reductase family signature 183 205 1.6E-23 T 22-04-2016 SRM_RS07050 44aed9f153b7d52a89e4e3ab5b044fd2 526 PRINTS PR00419 Adrenodoxin reductase family signature 248 258 1.6E-23 T 22-04-2016 SRM_RS07050 44aed9f153b7d52a89e4e3ab5b044fd2 526 PRINTS PR00419 Adrenodoxin reductase family signature 322 336 1.6E-23 T 22-04-2016 SRM_RS07050 44aed9f153b7d52a89e4e3ab5b044fd2 526 Gene3D G3DSA:3.40.50.720 183 380 1.3E-51 T 22-04-2016 IPR016040 NAD(P)-binding domain SRM_RS07050 44aed9f153b7d52a89e4e3ab5b044fd2 526 PANTHER PTHR11938:SF75 63 507 1.2E-113 T 22-04-2016 SRM_RS07050 44aed9f153b7d52a89e4e3ab5b044fd2 526 Pfam PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster 69 169 5.1E-23 T 22-04-2016 IPR028261 Dihydroprymidine dehydrogenase domain II SRM_RS07050 44aed9f153b7d52a89e4e3ab5b044fd2 526 Gene3D G3DSA:3.50.50.60 402 510 1.1E-18 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SRM_RS07050 44aed9f153b7d52a89e4e3ab5b044fd2 526 PANTHER PTHR11938 63 507 1.2E-113 T 22-04-2016 SRM_RS07050 44aed9f153b7d52a89e4e3ab5b044fd2 526 Gene3D G3DSA:1.10.1060.10 39 182 3.7E-39 T 22-04-2016 SRM_RS07050 44aed9f153b7d52a89e4e3ab5b044fd2 526 SUPERFAMILY SSF51971 180 442 2.51E-56 T 22-04-2016 SRM_RS07050 44aed9f153b7d52a89e4e3ab5b044fd2 526 SUPERFAMILY SSF51971 422 508 3.3E-13 T 22-04-2016 SRM_RS07050 44aed9f153b7d52a89e4e3ab5b044fd2 526 SUPERFAMILY SSF46548 42 192 1.46E-33 T 22-04-2016 IPR009051 Alpha-helical ferredoxin GO:0051536 SRM_RS11110 2c77ef9497947381584ba982d1946253 559 SMART SM00228 98 169 3.5E-7 T 22-04-2016 IPR001478 PDZ domain GO:0005515 SRM_RS11110 2c77ef9497947381584ba982d1946253 559 Gene3D G3DSA:3.90.226.10 521 538 5.6E-58 T 22-04-2016 IPR029045 ClpP/crotonase-like domain SRM_RS11110 2c77ef9497947381584ba982d1946253 559 Gene3D G3DSA:3.90.226.10 180 351 5.6E-58 T 22-04-2016 IPR029045 ClpP/crotonase-like domain SRM_RS11110 2c77ef9497947381584ba982d1946253 559 Gene3D G3DSA:3.90.226.10 401 413 5.6E-58 T 22-04-2016 IPR029045 ClpP/crotonase-like domain SRM_RS11110 2c77ef9497947381584ba982d1946253 559 Pfam PF03572 Peptidase family S41 197 352 4.9E-45 T 22-04-2016 IPR005151 Tail specific protease GO:0006508|GO:0008236 SRM_RS11110 2c77ef9497947381584ba982d1946253 559 TIGRFAM TIGR00225 prc: C-terminal processing peptidase 53 351 3.0E-80 T 22-04-2016 IPR004447 C-terminal-processing peptidase S41A GO:0006508|GO:0008236 SRM_RS11110 2c77ef9497947381584ba982d1946253 559 PANTHER PTHR32060:SF9 47 433 1.8E-105 T 22-04-2016 SRM_RS11110 2c77ef9497947381584ba982d1946253 559 SMART SM00245 171 358 9.2E-50 T 22-04-2016 IPR005151 Tail specific protease GO:0006508|GO:0008236 SRM_RS11110 2c77ef9497947381584ba982d1946253 559 SUPERFAMILY SSF52096 31 116 1.39E-64 T 22-04-2016 IPR029045 ClpP/crotonase-like domain SRM_RS11110 2c77ef9497947381584ba982d1946253 559 SUPERFAMILY SSF52096 191 352 1.39E-64 T 22-04-2016 IPR029045 ClpP/crotonase-like domain SRM_RS11110 2c77ef9497947381584ba982d1946253 559 SUPERFAMILY SSF50156 87 180 2.14E-12 T 22-04-2016 IPR001478 PDZ domain GO:0005515 SRM_RS11110 2c77ef9497947381584ba982d1946253 559 Pfam PF13180 PDZ domain 98 177 4.6E-9 T 22-04-2016 IPR001478 PDZ domain GO:0005515 SRM_RS11110 2c77ef9497947381584ba982d1946253 559 Gene3D G3DSA:2.30.42.10 103 179 5.2E-19 T 22-04-2016 IPR001478 PDZ domain GO:0005515 SRM_RS11110 2c77ef9497947381584ba982d1946253 559 Gene3D G3DSA:3.30.750.44 53 102 1.2E-4 T 22-04-2016 SRM_RS11110 2c77ef9497947381584ba982d1946253 559 PANTHER PTHR32060 47 433 1.8E-105 T 22-04-2016 SRM_RS04675 9c47723b4f4cc5bcda9d886d2d9c64ec 821 Pfam PF13840 ACT domain 401 461 1.9E-7 T 22-04-2016 IPR027795 GATS-like ACT domain SRM_RS04675 9c47723b4f4cc5bcda9d886d2d9c64ec 821 Pfam PF13840 ACT domain 318 377 2.0E-6 T 22-04-2016 IPR027795 GATS-like ACT domain SRM_RS04675 9c47723b4f4cc5bcda9d886d2d9c64ec 821 PANTHER PTHR21499 9 478 5.6E-179 T 22-04-2016 SRM_RS04675 9c47723b4f4cc5bcda9d886d2d9c64ec 821 PIRSF PIRSF000727 11 821 2.6E-296 T 22-04-2016 IPR011147 Bifunctional aspartokinase/homoserine dehydrogenase I GO:0004072|GO:0004412|GO:0009067|GO:0055114 KEGG: 00260+1.1.1.3+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+1.1.1.3+2.7.2.4|KEGG: 00300+1.1.1.3+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|UniPathway: UPA00034|UniPathway: UPA00050|UniPathway: UPA00050|UniPathway: UPA00051|UniPathway: UPA00051 SRM_RS04675 9c47723b4f4cc5bcda9d886d2d9c64ec 821 Pfam PF00742 Homoserine dehydrogenase 621 817 2.6E-53 T 22-04-2016 IPR001342 Homoserine dehydrogenase, catalytic GO:0006520|GO:0055114 KEGG: 00260+1.1.1.3|KEGG: 00270+1.1.1.3|KEGG: 00300+1.1.1.3|UniPathway: UPA00050|UniPathway: UPA00051 SRM_RS04675 9c47723b4f4cc5bcda9d886d2d9c64ec 821 Gene3D G3DSA:3.40.1160.10 120 305 3.7E-63 T 22-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 SRM_RS04675 9c47723b4f4cc5bcda9d886d2d9c64ec 821 Gene3D G3DSA:3.40.1160.10 8 60 3.7E-63 T 22-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 SRM_RS04675 9c47723b4f4cc5bcda9d886d2d9c64ec 821 Gene3D G3DSA:3.30.360.10 643 799 1.3E-57 T 22-04-2016 SRM_RS04675 9c47723b4f4cc5bcda9d886d2d9c64ec 821 SUPERFAMILY SSF51735 470 643 1.07E-34 T 22-04-2016 IPR016040 NAD(P)-binding domain SRM_RS04675 9c47723b4f4cc5bcda9d886d2d9c64ec 821 TIGRFAM TIGR00657 asp_kinases: aspartate kinase 11 466 2.0E-107 T 22-04-2016 IPR001341 Aspartate kinase domain GO:0004072|GO:0008652 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|UniPathway: UPA00034|UniPathway: UPA00050|UniPathway: UPA00051 SRM_RS04675 9c47723b4f4cc5bcda9d886d2d9c64ec 821 SUPERFAMILY SSF55021 391 481 1.87E-22 T 22-04-2016 SRM_RS04675 9c47723b4f4cc5bcda9d886d2d9c64ec 821 Gene3D G3DSA:3.40.50.720 471 642 2.0E-59 T 22-04-2016 IPR016040 NAD(P)-binding domain SRM_RS04675 9c47723b4f4cc5bcda9d886d2d9c64ec 821 PANTHER PTHR21499:SF1 9 478 5.6E-179 T 22-04-2016 SRM_RS04675 9c47723b4f4cc5bcda9d886d2d9c64ec 821 SUPERFAMILY SSF53633 11 304 1.44E-73 T 22-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 SRM_RS04675 9c47723b4f4cc5bcda9d886d2d9c64ec 821 SUPERFAMILY SSF55021 312 387 1.97E-20 T 22-04-2016 SRM_RS04675 9c47723b4f4cc5bcda9d886d2d9c64ec 821 SUPERFAMILY SSF55347 621 804 2.55E-48 T 22-04-2016 SRM_RS04675 9c47723b4f4cc5bcda9d886d2d9c64ec 821 ProSitePatterns PS00324 Aspartokinase signature. 13 21 - T 22-04-2016 IPR018042 Aspartate kinase, conserved site GO:0004072|GO:0008652 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|UniPathway: UPA00034|UniPathway: UPA00050|UniPathway: UPA00051 SRM_RS04675 9c47723b4f4cc5bcda9d886d2d9c64ec 821 Pfam PF03447 Homoserine dehydrogenase, NAD binding domain 479 613 3.4E-20 T 22-04-2016 IPR005106 Aspartate/homoserine dehydrogenase, NAD-binding GO:0016491|GO:0050661|GO:0055114 SRM_RS04675 9c47723b4f4cc5bcda9d886d2d9c64ec 821 ProSitePatterns PS01042 Homoserine dehydrogenase signature. 667 689 - T 22-04-2016 IPR019811 Homoserine dehydrogenase, conserved site GO:0006520|GO:0055114 KEGG: 00260+1.1.1.3|KEGG: 00270+1.1.1.3|KEGG: 00300+1.1.1.3|UniPathway: UPA00050|UniPathway: UPA00051 SRM_RS04675 9c47723b4f4cc5bcda9d886d2d9c64ec 821 Pfam PF00696 Amino acid kinase family 11 292 2.0E-46 T 22-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 SRM_RS05355 f90e639f018e187bcc09001bc8827d8e 244 SUPERFAMILY SSF53335 14 236 1.39E-41 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SRM_RS05355 f90e639f018e187bcc09001bc8827d8e 244 PANTHER PTHR10108 15 241 3.6E-68 T 22-04-2016 SRM_RS05355 f90e639f018e187bcc09001bc8827d8e 244 Gene3D G3DSA:3.40.50.150 18 237 5.3E-46 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SRM_RS05355 f90e639f018e187bcc09001bc8827d8e 244 ProSitePatterns PS01184 ubiE/COQ5 methyltransferase family signature 2. 151 165 - T 22-04-2016 IPR023576 UbiE/COQ5 methyltransferase, conserved site GO:0008168 KEGG: 00130+2.1.1.163|KEGG: 00564+2.1.1.16|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895|UniPathway: UPA00079 SRM_RS05355 f90e639f018e187bcc09001bc8827d8e 244 ProSitePatterns PS01183 ubiE/COQ5 methyltransferase family signature 1. 30 45 - T 22-04-2016 IPR023576 UbiE/COQ5 methyltransferase, conserved site GO:0008168 KEGG: 00130+2.1.1.163|KEGG: 00564+2.1.1.16|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895|UniPathway: UPA00079 SRM_RS05355 f90e639f018e187bcc09001bc8827d8e 244 TIGRFAM TIGR01934 MenG_MenH_UbiE: ubiquinone/menaquinone biosynthesis methyltransferase 19 241 3.2E-75 T 22-04-2016 IPR004033 UbiE/COQ5 methyltransferase GO:0008168 KEGG: 00130+2.1.1.163|KEGG: 00564+2.1.1.16|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895|UniPathway: UPA00079 SRM_RS05355 f90e639f018e187bcc09001bc8827d8e 244 Hamap MF_01813 Ubiquinone/menaquinone biosynthesis C-methyltransferase UbiE [ubiE]. 10 243 33.82 T 22-04-2016 IPR004033 UbiE/COQ5 methyltransferase GO:0008168 KEGG: 00130+2.1.1.163|KEGG: 00564+2.1.1.16|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895|UniPathway: UPA00079 SRM_RS05355 f90e639f018e187bcc09001bc8827d8e 244 Pfam PF01209 ubiE/COQ5 methyltransferase family 15 241 4.7E-60 T 22-04-2016 IPR004033 UbiE/COQ5 methyltransferase GO:0008168 KEGG: 00130+2.1.1.163|KEGG: 00564+2.1.1.16|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895|UniPathway: UPA00079 SRM_RS05355 f90e639f018e187bcc09001bc8827d8e 244 PANTHER PTHR10108:SF24 15 241 3.6E-68 T 22-04-2016 SRM_RS14110 5b2117c130cb0dc94da69cc11a3eb7b9 470 Gene3D G3DSA:3.30.360.10 190 443 1.8E-11 T 22-04-2016 SRM_RS14110 5b2117c130cb0dc94da69cc11a3eb7b9 470 PANTHER PTHR22604 224 330 7.3E-109 T 22-04-2016 SRM_RS14110 5b2117c130cb0dc94da69cc11a3eb7b9 470 PANTHER PTHR22604 1 204 7.3E-109 T 22-04-2016 SRM_RS14110 5b2117c130cb0dc94da69cc11a3eb7b9 470 PANTHER PTHR22604 354 454 7.3E-109 T 22-04-2016 SRM_RS14110 5b2117c130cb0dc94da69cc11a3eb7b9 470 SUPERFAMILY SSF55347 240 309 3.11E-12 T 22-04-2016 SRM_RS14110 5b2117c130cb0dc94da69cc11a3eb7b9 470 SUPERFAMILY SSF55347 175 207 3.11E-12 T 22-04-2016 SRM_RS14110 5b2117c130cb0dc94da69cc11a3eb7b9 470 Gene3D G3DSA:3.40.50.720 31 189 5.6E-41 T 22-04-2016 IPR016040 NAD(P)-binding domain SRM_RS14110 5b2117c130cb0dc94da69cc11a3eb7b9 470 PANTHER PTHR22604:SF101 224 330 7.3E-109 T 22-04-2016 SRM_RS14110 5b2117c130cb0dc94da69cc11a3eb7b9 470 PANTHER PTHR22604:SF101 1 204 7.3E-109 T 22-04-2016 SRM_RS14110 5b2117c130cb0dc94da69cc11a3eb7b9 470 PANTHER PTHR22604:SF101 354 454 7.3E-109 T 22-04-2016 SRM_RS14110 5b2117c130cb0dc94da69cc11a3eb7b9 470 SUPERFAMILY SSF51735 29 202 2.41E-36 T 22-04-2016 IPR016040 NAD(P)-binding domain SRM_RS14110 5b2117c130cb0dc94da69cc11a3eb7b9 470 Pfam PF01408 Oxidoreductase family, NAD-binding Rossmann fold 38 169 7.8E-16 T 22-04-2016 IPR000683 Oxidoreductase, N-terminal GO:0016491 SRM_RS13075 d3bc391269e90cefeb4408ad02a9cdcd 315 Pfam PF08443 RimK-like ATP-grasp domain 95 206 1.8E-5 T 22-04-2016 IPR013651 ATP-grasp fold, RimK-type SRM_RS13075 d3bc391269e90cefeb4408ad02a9cdcd 315 SUPERFAMILY SSF56059 84 289 5.77E-18 T 22-04-2016 SRM_RS13075 d3bc391269e90cefeb4408ad02a9cdcd 315 PANTHER PTHR21621 59 280 1.0E-15 T 22-04-2016 SRM_RS13075 d3bc391269e90cefeb4408ad02a9cdcd 315 Gene3D G3DSA:3.30.1490.20 88 178 4.0E-6 T 22-04-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 SRM_RS10765 9db65545f4f3a4ef2e8959350d690348 247 Pfam PF13649 Methyltransferase domain 44 141 1.4E-18 T 22-04-2016 SRM_RS10765 9db65545f4f3a4ef2e8959350d690348 247 PANTHER PTHR10108 203 220 6.8E-25 T 22-04-2016 SRM_RS10765 9db65545f4f3a4ef2e8959350d690348 247 PANTHER PTHR10108 1 180 6.8E-25 T 22-04-2016 SRM_RS10765 9db65545f4f3a4ef2e8959350d690348 247 SUPERFAMILY SSF53335 2 246 8.97E-40 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SRM_RS10765 9db65545f4f3a4ef2e8959350d690348 247 Gene3D G3DSA:3.40.50.150 3 226 1.6E-36 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SRM_RS14460 4b9e1d6bf9dbfdd5942ea25945b98592 639 SMART SM00073 12 109 2.6E-24 T 22-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 SRM_RS14460 4b9e1d6bf9dbfdd5942ea25945b98592 639 Pfam PF01584 CheW-like domain 478 616 1.2E-24 T 22-04-2016 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 SRM_RS14460 4b9e1d6bf9dbfdd5942ea25945b98592 639 SMART SM01231 207 285 3.6E-17 T 22-04-2016 IPR004105 Histidine kinase CheA-like, homodimeric domain GO:0000155|GO:0000160|GO:0004673|GO:0005737|GO:0006935 SRM_RS14460 4b9e1d6bf9dbfdd5942ea25945b98592 639 PANTHER PTHR22617 12 629 2.9E-189 T 22-04-2016 SRM_RS14460 4b9e1d6bf9dbfdd5942ea25945b98592 639 Gene3D G3DSA:2.30.30.40 473 494 8.6E-23 T 22-04-2016 SRM_RS14460 4b9e1d6bf9dbfdd5942ea25945b98592 639 Gene3D G3DSA:2.30.30.40 569 613 8.6E-23 T 22-04-2016 SRM_RS14460 4b9e1d6bf9dbfdd5942ea25945b98592 639 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 333 472 3.3E-18 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SRM_RS14460 4b9e1d6bf9dbfdd5942ea25945b98592 639 Gene3D G3DSA:3.30.565.10 287 472 3.0E-41 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SRM_RS14460 4b9e1d6bf9dbfdd5942ea25945b98592 639 SMART SM00387 330 473 1.5E-25 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SRM_RS14460 4b9e1d6bf9dbfdd5942ea25945b98592 639 SUPERFAMILY SSF55874 287 471 3.93E-42 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SRM_RS14460 4b9e1d6bf9dbfdd5942ea25945b98592 639 Gene3D G3DSA:1.10.287.560 209 286 1.6E-16 T 22-04-2016 IPR004105 Histidine kinase CheA-like, homodimeric domain GO:0000155|GO:0000160|GO:0004673|GO:0005737|GO:0006935 SRM_RS14460 4b9e1d6bf9dbfdd5942ea25945b98592 639 Gene3D G3DSA:2.40.50.180 497 568 1.2E-14 T 22-04-2016 SRM_RS14460 4b9e1d6bf9dbfdd5942ea25945b98592 639 PANTHER PTHR22617:SF6 12 629 2.9E-189 T 22-04-2016 SRM_RS14460 4b9e1d6bf9dbfdd5942ea25945b98592 639 Gene3D G3DSA:1.20.120.160 9 141 5.8E-35 T 22-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 SRM_RS14460 4b9e1d6bf9dbfdd5942ea25945b98592 639 PRINTS PR00344 Bacterial sensor protein C-terminal signature 457 470 7.3E-15 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SRM_RS14460 4b9e1d6bf9dbfdd5942ea25945b98592 639 PRINTS PR00344 Bacterial sensor protein C-terminal signature 417 427 7.3E-15 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SRM_RS14460 4b9e1d6bf9dbfdd5942ea25945b98592 639 PRINTS PR00344 Bacterial sensor protein C-terminal signature 433 451 7.3E-15 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SRM_RS14460 4b9e1d6bf9dbfdd5942ea25945b98592 639 PRINTS PR00344 Bacterial sensor protein C-terminal signature 375 389 7.3E-15 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SRM_RS14460 4b9e1d6bf9dbfdd5942ea25945b98592 639 SMART SM00260 465 613 1.5E-33 T 22-04-2016 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 SRM_RS14460 4b9e1d6bf9dbfdd5942ea25945b98592 639 SUPERFAMILY SSF47384 208 286 1.77E-10 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SRM_RS14460 4b9e1d6bf9dbfdd5942ea25945b98592 639 SUPERFAMILY SSF50341 472 613 6.28E-31 T 22-04-2016 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 SRM_RS14460 4b9e1d6bf9dbfdd5942ea25945b98592 639 Pfam PF02895 Signal transducing histidine kinase, homodimeric domain 208 284 2.1E-16 T 22-04-2016 IPR004105 Histidine kinase CheA-like, homodimeric domain GO:0000155|GO:0000160|GO:0004673|GO:0005737|GO:0006935 SRM_RS14460 4b9e1d6bf9dbfdd5942ea25945b98592 639 Pfam PF01627 Hpt domain 14 104 1.1E-13 T 22-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 SRM_RS14460 4b9e1d6bf9dbfdd5942ea25945b98592 639 SUPERFAMILY SSF47226 12 134 5.5E-26 T 22-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 SRM_RS02615 bd589436e9b5807feaf20e35b0b21b7b 1259 Gene3D G3DSA:3.30.450.20 917 1045 2.1E-23 T 22-04-2016 SRM_RS02615 bd589436e9b5807feaf20e35b0b21b7b 1259 SUPERFAMILY SSF52738 92 277 3.53E-52 T 22-04-2016 IPR000673 Signal transduction response regulator, chemotaxis, protein-glutamate methylesterase GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 SRM_RS02615 bd589436e9b5807feaf20e35b0b21b7b 1259 Gene3D G3DSA:3.40.50.150 359 553 8.2E-62 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SRM_RS02615 bd589436e9b5807feaf20e35b0b21b7b 1259 SUPERFAMILY SSF55785 915 1040 6.12E-22 T 22-04-2016 IPR000014 PAS domain SRM_RS02615 bd589436e9b5807feaf20e35b0b21b7b 1259 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 1169 1258 6.9E-5 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SRM_RS02615 bd589436e9b5807feaf20e35b0b21b7b 1259 SMART SM00086 1005 1047 0.0058 T 22-04-2016 IPR001610 PAC motif SRM_RS02615 bd589436e9b5807feaf20e35b0b21b7b 1259 SMART SM00086 879 919 16.0 T 22-04-2016 IPR001610 PAC motif SRM_RS02615 bd589436e9b5807feaf20e35b0b21b7b 1259 Pfam PF01739 CheR methyltransferase, SAM binding domain 361 550 5.4E-52 T 22-04-2016 IPR022642 MCP methyltransferase, CheR-type, SAM-binding domain, C-terminal SRM_RS02615 bd589436e9b5807feaf20e35b0b21b7b 1259 PANTHER PTHR24422 186 928 6.6E-215 T 22-04-2016 SRM_RS02615 bd589436e9b5807feaf20e35b0b21b7b 1259 SUPERFAMILY SSF53335 361 549 8.16E-48 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SRM_RS02615 bd589436e9b5807feaf20e35b0b21b7b 1259 SMART SM00138 294 555 1.5E-85 T 22-04-2016 IPR000780 MCP methyltransferase, CheR-type GO:0008757 SRM_RS02615 bd589436e9b5807feaf20e35b0b21b7b 1259 SUPERFAMILY SSF55785 802 917 1.58E-10 T 22-04-2016 IPR000014 PAS domain SRM_RS02615 bd589436e9b5807feaf20e35b0b21b7b 1259 Pfam PF13596 PAS domain 812 917 6.8E-23 T 22-04-2016 SRM_RS02615 bd589436e9b5807feaf20e35b0b21b7b 1259 Pfam PF13426 PAS domain 944 1045 3.6E-12 T 22-04-2016 IPR000014 PAS domain SRM_RS02615 bd589436e9b5807feaf20e35b0b21b7b 1259 Pfam PF01339 CheB methylesterase 96 270 1.5E-52 T 22-04-2016 IPR000673 Signal transduction response regulator, chemotaxis, protein-glutamate methylesterase GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 SRM_RS02615 bd589436e9b5807feaf20e35b0b21b7b 1259 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 931 1053 4.4E-15 T 22-04-2016 IPR000014 PAS domain SRM_RS02615 bd589436e9b5807feaf20e35b0b21b7b 1259 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 812 926 2.5E-6 T 22-04-2016 IPR000014 PAS domain SRM_RS02615 bd589436e9b5807feaf20e35b0b21b7b 1259 SMART SM00387 1168 1259 1.8E-6 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SRM_RS02615 bd589436e9b5807feaf20e35b0b21b7b 1259 Gene3D G3DSA:3.30.450.20 803 916 1.9E-12 T 22-04-2016 SRM_RS02615 bd589436e9b5807feaf20e35b0b21b7b 1259 PANTHER PTHR24422:SF6 186 928 6.6E-215 T 22-04-2016 SRM_RS02615 bd589436e9b5807feaf20e35b0b21b7b 1259 Gene3D G3DSA:3.40.50.180 87 277 3.4E-60 T 22-04-2016 IPR000673 Signal transduction response regulator, chemotaxis, protein-glutamate methylesterase GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 SRM_RS02615 bd589436e9b5807feaf20e35b0b21b7b 1259 SUPERFAMILY SSF47757 291 362 3.01E-14 T 22-04-2016 IPR022641 Chemotaxis receptor methyltransferase CheR, N-terminal SRM_RS02615 bd589436e9b5807feaf20e35b0b21b7b 1259 Gene3D G3DSA:3.30.565.10 1143 1258 4.1E-8 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SRM_RS02615 bd589436e9b5807feaf20e35b0b21b7b 1259 Pfam PF03705 CheR methyltransferase, all-alpha domain 297 347 2.7E-15 T 22-04-2016 IPR022641 Chemotaxis receptor methyltransferase CheR, N-terminal SRM_RS02615 bd589436e9b5807feaf20e35b0b21b7b 1259 PRINTS PR00996 Glutamate methyltransferase family signature 353 365 8.7E-28 T 22-04-2016 IPR000780 MCP methyltransferase, CheR-type GO:0008757 SRM_RS02615 bd589436e9b5807feaf20e35b0b21b7b 1259 PRINTS PR00996 Glutamate methyltransferase family signature 316 329 8.7E-28 T 22-04-2016 IPR000780 MCP methyltransferase, CheR-type GO:0008757 SRM_RS02615 bd589436e9b5807feaf20e35b0b21b7b 1259 PRINTS PR00996 Glutamate methyltransferase family signature 429 445 8.7E-28 T 22-04-2016 IPR000780 MCP methyltransferase, CheR-type GO:0008757 SRM_RS02615 bd589436e9b5807feaf20e35b0b21b7b 1259 PRINTS PR00996 Glutamate methyltransferase family signature 514 537 8.7E-28 T 22-04-2016 IPR000780 MCP methyltransferase, CheR-type GO:0008757 SRM_RS02615 bd589436e9b5807feaf20e35b0b21b7b 1259 PRINTS PR00996 Glutamate methyltransferase family signature 495 509 8.7E-28 T 22-04-2016 IPR000780 MCP methyltransferase, CheR-type GO:0008757 SRM_RS02615 bd589436e9b5807feaf20e35b0b21b7b 1259 PRINTS PR00996 Glutamate methyltransferase family signature 393 413 8.7E-28 T 22-04-2016 IPR000780 MCP methyltransferase, CheR-type GO:0008757 SRM_RS02615 bd589436e9b5807feaf20e35b0b21b7b 1259 Gene3D G3DSA:1.10.155.10 294 357 9.9E-15 T 22-04-2016 IPR022641 Chemotaxis receptor methyltransferase CheR, N-terminal SRM_RS02615 bd589436e9b5807feaf20e35b0b21b7b 1259 Pfam PF07730 Histidine kinase 1061 1128 1.5E-7 T 22-04-2016 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain GO:0000155|GO:0000160|GO:0016021|GO:0046983 SRM_RS02615 bd589436e9b5807feaf20e35b0b21b7b 1259 SUPERFAMILY SSF55874 1160 1258 6.88E-14 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SRM_RS02615 bd589436e9b5807feaf20e35b0b21b7b 1259 SMART SM00091 931 998 1.4E-5 T 22-04-2016 IPR000014 PAS domain SRM_RS02615 bd589436e9b5807feaf20e35b0b21b7b 1259 SMART SM00091 810 875 0.35 T 22-04-2016 IPR000014 PAS domain SRM_RS12975 e63ff48c49449886979bc8917ab100b3 200 Gene3D G3DSA:3.40.50.720 2 195 8.0E-41 T 22-04-2016 IPR016040 NAD(P)-binding domain SRM_RS12975 e63ff48c49449886979bc8917ab100b3 200 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 30 163 2.6E-17 T 22-04-2016 SRM_RS12975 e63ff48c49449886979bc8917ab100b3 200 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 145 162 6.3E-6 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SRM_RS12975 e63ff48c49449886979bc8917ab100b3 200 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 125 144 6.3E-6 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SRM_RS12975 e63ff48c49449886979bc8917ab100b3 200 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 2 19 6.3E-6 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SRM_RS12975 e63ff48c49449886979bc8917ab100b3 200 SUPERFAMILY SSF51735 3 160 3.57E-28 T 22-04-2016 IPR016040 NAD(P)-binding domain SRM_RS08610 611e42457fcc8df0b059d522e9f1a78e 341 ProSitePatterns PS00957 NAD-dependent glycerol-3-phosphate dehydrogenase signature. 189 210 - T 22-04-2016 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|UniPathway: UPA00940 SRM_RS08610 611e42457fcc8df0b059d522e9f1a78e 341 PIRSF PIRSF000114 1 333 2.7E-103 T 22-04-2016 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|UniPathway: UPA00940 SRM_RS08610 611e42457fcc8df0b059d522e9f1a78e 341 SUPERFAMILY SSF51735 4 180 8.88E-50 T 22-04-2016 IPR016040 NAD(P)-binding domain SRM_RS08610 611e42457fcc8df0b059d522e9f1a78e 341 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 199 223 2.6E-41 T 22-04-2016 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|UniPathway: UPA00940 SRM_RS08610 611e42457fcc8df0b059d522e9f1a78e 341 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 6 23 2.6E-41 T 22-04-2016 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|UniPathway: UPA00940 SRM_RS08610 611e42457fcc8df0b059d522e9f1a78e 341 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 239 256 2.6E-41 T 22-04-2016 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|UniPathway: UPA00940 SRM_RS08610 611e42457fcc8df0b059d522e9f1a78e 341 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 174 198 2.6E-41 T 22-04-2016 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|UniPathway: UPA00940 SRM_RS08610 611e42457fcc8df0b059d522e9f1a78e 341 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 134 154 2.6E-41 T 22-04-2016 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|UniPathway: UPA00940 SRM_RS08610 611e42457fcc8df0b059d522e9f1a78e 341 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 56 83 2.6E-41 T 22-04-2016 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|UniPathway: UPA00940 SRM_RS08610 611e42457fcc8df0b059d522e9f1a78e 341 Pfam PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus 181 321 5.1E-55 T 22-04-2016 IPR006109 Glycerol-3-phosphate dehydrogenase, NAD-dependent, C-terminal GO:0004367|GO:0005975|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|UniPathway: UPA00940 SRM_RS08610 611e42457fcc8df0b059d522e9f1a78e 341 Gene3D G3DSA:1.10.1040.10 191 332 7.4E-59 T 22-04-2016 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 SRM_RS08610 611e42457fcc8df0b059d522e9f1a78e 341 PANTHER PTHR11728 4 340 1.5E-128 T 22-04-2016 SRM_RS08610 611e42457fcc8df0b059d522e9f1a78e 341 Hamap MF_00394 Glycerol-3-phosphate dehydrogenase [NAD(P)+] [gpsA]. 2 323 36.747 T 22-04-2016 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|UniPathway: UPA00940 SRM_RS08610 611e42457fcc8df0b059d522e9f1a78e 341 Pfam PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus 3 159 1.3E-43 T 22-04-2016 IPR011128 Glycerol-3-phosphate dehydrogenase, NAD-dependent, N-terminal GO:0016616|GO:0046168|GO:0051287|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|UniPathway: UPA00940 SRM_RS08610 611e42457fcc8df0b059d522e9f1a78e 341 SUPERFAMILY SSF48179 180 333 4.76E-57 T 22-04-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 SRM_RS08610 611e42457fcc8df0b059d522e9f1a78e 341 Gene3D G3DSA:3.40.50.720 2 188 3.4E-56 T 22-04-2016 IPR016040 NAD(P)-binding domain SRM_RS05495 b5c00cb133a308ef8b5b5246960ed5f4 764 Gene3D G3DSA:2.60.40.1180 648 762 6.4E-13 T 22-04-2016 IPR013780 Glycosyl hydrolase, all-beta SRM_RS05495 b5c00cb133a308ef8b5b5246960ed5f4 764 Gene3D G3DSA:2.60.40.10 60 212 6.1E-53 T 22-04-2016 IPR013783 Immunoglobulin-like fold SRM_RS05495 b5c00cb133a308ef8b5b5246960ed5f4 764 SMART SM00642 194 628 6.7E-9 T 22-04-2016 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 SRM_RS05495 b5c00cb133a308ef8b5b5246960ed5f4 764 PANTHER PTHR10357 667 719 2.2E-300 T 22-04-2016 IPR015902 Glycoside hydrolase, family 13 GO:0003824 SRM_RS05495 b5c00cb133a308ef8b5b5246960ed5f4 764 PANTHER PTHR10357 58 639 2.2E-300 T 22-04-2016 IPR015902 Glycoside hydrolase, family 13 GO:0003824 SRM_RS05495 b5c00cb133a308ef8b5b5246960ed5f4 764 Pfam PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) 67 154 2.3E-14 T 22-04-2016 IPR004193 Glycoside hydrolase, family 13, N-terminal GO:0004553|GO:0005975 SRM_RS05495 b5c00cb133a308ef8b5b5246960ed5f4 764 SUPERFAMILY SSF81296 60 207 5.32E-46 T 22-04-2016 IPR014756 Immunoglobulin E-set SRM_RS05495 b5c00cb133a308ef8b5b5246960ed5f4 764 Pfam PF00128 Alpha amylase, catalytic domain 249 356 8.2E-9 T 22-04-2016 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 SRM_RS05495 b5c00cb133a308ef8b5b5246960ed5f4 764 PANTHER PTHR10357:SF74 667 719 2.2E-300 T 22-04-2016 SRM_RS05495 b5c00cb133a308ef8b5b5246960ed5f4 764 PANTHER PTHR10357:SF74 58 639 2.2E-300 T 22-04-2016 SRM_RS05495 b5c00cb133a308ef8b5b5246960ed5f4 764 SUPERFAMILY SSF51445 560 636 4.3E-128 T 22-04-2016 IPR017853 Glycoside hydrolase superfamily SRM_RS05495 b5c00cb133a308ef8b5b5246960ed5f4 764 SUPERFAMILY SSF51445 196 531 4.3E-128 T 22-04-2016 IPR017853 Glycoside hydrolase superfamily SRM_RS05495 b5c00cb133a308ef8b5b5246960ed5f4 764 TIGRFAM TIGR02100 glgX_debranch: glycogen debranching enzyme GlgX 61 720 1.5E-299 T 22-04-2016 IPR011837 Glycogen debranching enzyme, GlgX type GO:0004133|GO:0004553|GO:0005980 UniPathway: UPA00165 SRM_RS05495 b5c00cb133a308ef8b5b5246960ed5f4 764 Gene3D G3DSA:3.20.20.80 213 637 3.3E-118 T 22-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 SRM_RS05495 b5c00cb133a308ef8b5b5246960ed5f4 764 SUPERFAMILY SSF51011 648 761 2.63E-11 T 22-04-2016 SRM_RS06490 40704481a4e8f520baf432203048d08f 283 SMART SM01383 42 119 1.0E-43 T 22-04-2016 IPR002171 Ribosomal protein L2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SRM_RS06490 40704481a4e8f520baf432203048d08f 283 ProSitePatterns PS00467 Ribosomal protein L2 signature. 219 230 - T 22-04-2016 IPR022671 Ribosomal protein L2, conserved site GO:0003735|GO:0005840|GO:0006412 SRM_RS06490 40704481a4e8f520baf432203048d08f 283 Pfam PF00181 Ribosomal Proteins L2, RNA binding domain 42 118 1.3E-31 T 22-04-2016 IPR022666 Ribosomal Proteins L2, RNA binding domain GO:0003735|GO:0005622|GO:0005840|GO:0006412 SRM_RS06490 40704481a4e8f520baf432203048d08f 283 TIGRFAM TIGR01171 rplB_bact: ribosomal protein uL2 3 274 2.3E-119 T 22-04-2016 IPR005880 Ribosomal protein L2, bacterial/organellar-type GO:0003723|GO:0003735|GO:0006412|GO:0015934|GO:0016740 SRM_RS06490 40704481a4e8f520baf432203048d08f 283 SUPERFAMILY SSF50249 3 124 5.14E-46 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold SRM_RS06490 40704481a4e8f520baf432203048d08f 283 PANTHER PTHR13691 1 282 1.0E-133 T 22-04-2016 IPR002171 Ribosomal protein L2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SRM_RS06490 40704481a4e8f520baf432203048d08f 283 Gene3D G3DSA:2.40.50.140 1 115 4.3E-48 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold SRM_RS06490 40704481a4e8f520baf432203048d08f 283 SUPERFAMILY SSF50104 127 272 2.11E-56 T 22-04-2016 IPR008991 Translation protein SH3-like domain SRM_RS06490 40704481a4e8f520baf432203048d08f 283 PIRSF PIRSF002158 11 276 1.6E-91 T 22-04-2016 IPR002171 Ribosomal protein L2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SRM_RS06490 40704481a4e8f520baf432203048d08f 283 Hamap MF_01320_B 50S ribosomal protein L2 [rplB]. 1 274 45.325 T 22-04-2016 IPR005880 Ribosomal protein L2, bacterial/organellar-type GO:0003723|GO:0003735|GO:0006412|GO:0015934|GO:0016740 SRM_RS06490 40704481a4e8f520baf432203048d08f 283 Gene3D G3DSA:4.10.950.10 197 273 9.8E-32 T 22-04-2016 IPR014726 Ribosomal protein L2, domain 3 SRM_RS06490 40704481a4e8f520baf432203048d08f 283 Gene3D G3DSA:2.30.30.30 120 195 2.1E-31 T 22-04-2016 IPR014722 Ribosomal protein L2 domain 2 SRM_RS06490 40704481a4e8f520baf432203048d08f 283 Pfam PF03947 Ribosomal Proteins L2, C-terminal domain 127 248 1.3E-51 T 22-04-2016 IPR022669 Ribosomal protein L2, C-terminal GO:0003735|GO:0005840|GO:0006412 SRM_RS06490 40704481a4e8f520baf432203048d08f 283 SMART SM01382 125 252 8.2E-81 T 22-04-2016 IPR022669 Ribosomal protein L2, C-terminal GO:0003735|GO:0005840|GO:0006412 SRM_RS12870 d120f02de9e1576931d9db31605326e2 870 Gene3D G3DSA:3.40.50.300 469 584 2.5E-13 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SRM_RS12870 d120f02de9e1576931d9db31605326e2 870 SUPERFAMILY SSF52540 450 582 4.19E-26 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SRM_RS12870 d120f02de9e1576931d9db31605326e2 870 SUPERFAMILY SSF52540 247 391 4.19E-26 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SRM_RS12870 d120f02de9e1576931d9db31605326e2 870 Pfam PF00271 Helicase conserved C-terminal domain 482 580 9.8E-8 T 22-04-2016 IPR001650 Helicase, C-terminal SRM_RS12870 d120f02de9e1576931d9db31605326e2 870 SMART SM00487 220 421 1.2E-4 T 22-04-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain SRM_RS12870 d120f02de9e1576931d9db31605326e2 870 Pfam PF01844 HNH endonuclease 141 187 1.0E-7 T 22-04-2016 IPR002711 HNH endonuclease GO:0003676|GO:0004519 SRM_RS12870 d120f02de9e1576931d9db31605326e2 870 SMART SM00490 499 581 0.0086 T 22-04-2016 IPR001650 Helicase, C-terminal SRM_RS12870 d120f02de9e1576931d9db31605326e2 870 SMART SM00507 128 183 0.0064 T 22-04-2016 IPR003615 HNH nuclease SRM_RS12870 d120f02de9e1576931d9db31605326e2 870 Pfam PF04851 Type III restriction enzyme, res subunit 223 389 8.0E-18 T 22-04-2016 IPR006935 Helicase/UvrB, N-terminal GO:0003677|GO:0005524|GO:0016787 SRM_RS12870 d120f02de9e1576931d9db31605326e2 870 Gene3D G3DSA:3.40.50.300 220 394 6.9E-17 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SRM_RS08605 267d1135b0a4ec8f9336a0b81a1ee4f5 303 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 282 298 2.87E-6 T 22-04-2016 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 SRM_RS08605 267d1135b0a4ec8f9336a0b81a1ee4f5 303 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 267 282 2.87E-6 T 22-04-2016 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 SRM_RS08605 267d1135b0a4ec8f9336a0b81a1ee4f5 303 Gene3D G3DSA:1.10.10.60 253 298 4.3E-14 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 SRM_RS08605 267d1135b0a4ec8f9336a0b81a1ee4f5 303 Pfam PF06719 AraC-type transcriptional regulator N-terminus 30 184 1.8E-10 T 22-04-2016 IPR009594 Transcription regulator HTH, AraC, N-terminal SRM_RS08605 267d1135b0a4ec8f9336a0b81a1ee4f5 303 SUPERFAMILY SSF46689 201 249 3.06E-10 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 SRM_RS08605 267d1135b0a4ec8f9336a0b81a1ee4f5 303 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 252 294 - T 22-04-2016 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 SRM_RS08605 267d1135b0a4ec8f9336a0b81a1ee4f5 303 Pfam PF12833 Helix-turn-helix domain 221 298 4.2E-23 T 22-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 SRM_RS08605 267d1135b0a4ec8f9336a0b81a1ee4f5 303 SMART SM00342 215 298 1.7E-30 T 22-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 SRM_RS08605 267d1135b0a4ec8f9336a0b81a1ee4f5 303 SUPERFAMILY SSF46689 252 298 1.48E-11 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 SRM_RS08605 267d1135b0a4ec8f9336a0b81a1ee4f5 303 Gene3D G3DSA:1.10.10.60 201 252 9.7E-16 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 SRM_RS08605 267d1135b0a4ec8f9336a0b81a1ee4f5 303 PANTHER PTHR11019 55 297 1.3E-27 T 22-04-2016 SRM_RS03225 958f5731bec6ab9a3642e98dc78e12ab 246 PANTHER PTHR30348 1 240 1.2E-82 T 22-04-2016 SRM_RS03225 958f5731bec6ab9a3642e98dc78e12ab 246 Pfam PF01904 Protein of unknown function DUF72 21 238 8.0E-69 T 22-04-2016 IPR002763 Protein of unknown function DUF72 SRM_RS03225 958f5731bec6ab9a3642e98dc78e12ab 246 Gene3D G3DSA:3.20.20.410 2 241 2.0E-84 T 22-04-2016 IPR002763 Protein of unknown function DUF72 SRM_RS03225 958f5731bec6ab9a3642e98dc78e12ab 246 SUPERFAMILY SSF117396 4 240 1.23E-81 T 22-04-2016 IPR002763 Protein of unknown function DUF72 SRM_RS15510 16646e22fc462ea4ea144ea17e67e303 669 SMART SM00382 357 523 9.2E-12 T 22-04-2016 IPR003593 AAA+ ATPase domain SRM_RS15510 16646e22fc462ea4ea144ea17e67e303 669 SMART SM00382 27 237 8.3E-14 T 22-04-2016 IPR003593 AAA+ ATPase domain SRM_RS15510 16646e22fc462ea4ea144ea17e67e303 669 SUPERFAMILY SSF52540 312 532 3.0E-40 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SRM_RS15510 16646e22fc462ea4ea144ea17e67e303 669 Pfam PF00005 ABC transporter 18 192 3.8E-25 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 SRM_RS15510 16646e22fc462ea4ea144ea17e67e303 669 Pfam PF00005 ABC transporter 353 478 1.1E-20 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 SRM_RS15510 16646e22fc462ea4ea144ea17e67e303 669 Pfam PF12848 ABC transporter 232 315 3.2E-29 T 22-04-2016 IPR032781 ABC-transporter extension domain SRM_RS15510 16646e22fc462ea4ea144ea17e67e303 669 SUPERFAMILY SSF52540 2 245 7.62E-52 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SRM_RS15510 16646e22fc462ea4ea144ea17e67e303 669 ProSitePatterns PS00211 ABC transporters family signature. 450 464 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 SRM_RS15510 16646e22fc462ea4ea144ea17e67e303 669 ProSitePatterns PS00211 ABC transporters family signature. 164 178 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 SRM_RS15510 16646e22fc462ea4ea144ea17e67e303 669 Pfam PF16326 ABC transporter C-terminal domain 595 662 2.3E-14 T 22-04-2016 IPR032524 ABC transporter Uup, C-terminal GO:0003677 SRM_RS15510 16646e22fc462ea4ea144ea17e67e303 669 PANTHER PTHR19211 1 535 2.8E-229 T 22-04-2016 SRM_RS15510 16646e22fc462ea4ea144ea17e67e303 669 PANTHER PTHR19211 613 651 2.8E-229 T 22-04-2016 SRM_RS15510 16646e22fc462ea4ea144ea17e67e303 669 Gene3D G3DSA:3.40.50.300 327 536 1.5E-37 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SRM_RS15510 16646e22fc462ea4ea144ea17e67e303 669 Gene3D G3DSA:3.40.50.300 1 89 5.4E-54 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SRM_RS15510 16646e22fc462ea4ea144ea17e67e303 669 Gene3D G3DSA:3.40.50.300 125 279 5.4E-54 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SRM_RS11975 ad02985ee2c5c58193092a2b43e7e51b 379 SUPERFAMILY SSF53784 2 349 9.03E-116 T 22-04-2016 IPR000023 Phosphofructokinase domain GO:0003872|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: REACT_474|UniPathway: UPA00109 SRM_RS11975 ad02985ee2c5c58193092a2b43e7e51b 379 Gene3D G3DSA:3.40.50.450 3 219 8.1E-68 T 22-04-2016 SRM_RS11975 ad02985ee2c5c58193092a2b43e7e51b 379 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 223 235 4.9E-71 T 22-04-2016 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: REACT_474|UniPathway: UPA00109 SRM_RS11975 ad02985ee2c5c58193092a2b43e7e51b 379 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 273 295 4.9E-71 T 22-04-2016 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: REACT_474|UniPathway: UPA00109 SRM_RS11975 ad02985ee2c5c58193092a2b43e7e51b 379 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 104 120 4.9E-71 T 22-04-2016 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: REACT_474|UniPathway: UPA00109 SRM_RS11975 ad02985ee2c5c58193092a2b43e7e51b 379 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 149 167 4.9E-71 T 22-04-2016 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: REACT_474|UniPathway: UPA00109 SRM_RS11975 ad02985ee2c5c58193092a2b43e7e51b 379 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 10 29 4.9E-71 T 22-04-2016 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: REACT_474|UniPathway: UPA00109 SRM_RS11975 ad02985ee2c5c58193092a2b43e7e51b 379 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 187 204 4.9E-71 T 22-04-2016 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: REACT_474|UniPathway: UPA00109 SRM_RS11975 ad02985ee2c5c58193092a2b43e7e51b 379 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 36 49 4.9E-71 T 22-04-2016 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: REACT_474|UniPathway: UPA00109 SRM_RS11975 ad02985ee2c5c58193092a2b43e7e51b 379 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 131 148 4.9E-71 T 22-04-2016 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: REACT_474|UniPathway: UPA00109 SRM_RS11975 ad02985ee2c5c58193092a2b43e7e51b 379 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 169 185 4.9E-71 T 22-04-2016 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: REACT_474|UniPathway: UPA00109 SRM_RS11975 ad02985ee2c5c58193092a2b43e7e51b 379 Hamap MF_01976 Pyrophosphate--fructose 6-phosphate 1-phosphotransferase [pfp]. 6 358 40.582 T 22-04-2016 IPR012829 Phosphofructokinase, mixed-substrate PFK group III GO:0006096|GO:0047334 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|UniPathway: UPA00109 SRM_RS11975 ad02985ee2c5c58193092a2b43e7e51b 379 PIRSF PIRSF000532 4 358 3.8E-114 T 22-04-2016 IPR012003 ATP-dependent 6-phosphofructokinase, prokaryotic-type GO:0005524|GO:0006002|GO:0006096|GO:0008443 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|UniPathway: UPA00109 SRM_RS11975 ad02985ee2c5c58193092a2b43e7e51b 379 PANTHER PTHR13697 3 340 3.2E-112 T 22-04-2016 SRM_RS11975 ad02985ee2c5c58193092a2b43e7e51b 379 ProSitePatterns PS00433 Phosphofructokinase signature. 277 295 - T 22-04-2016 IPR015912 Phosphofructokinase, conserved site GO:0003872|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: REACT_474|UniPathway: UPA00109 SRM_RS11975 ad02985ee2c5c58193092a2b43e7e51b 379 Pfam PF00365 Phosphofructokinase 7 308 4.2E-96 T 22-04-2016 IPR000023 Phosphofructokinase domain GO:0003872|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: REACT_474|UniPathway: UPA00109 SRM_RS09645 cf3fcb72f3c2aecee7c3564c45ae119f 279 PANTHER PTHR10314:SF4 22 50 3.0E-23 T 22-04-2016 SRM_RS09645 cf3fcb72f3c2aecee7c3564c45ae119f 279 PANTHER PTHR10314:SF4 73 128 3.0E-23 T 22-04-2016 SRM_RS09645 cf3fcb72f3c2aecee7c3564c45ae119f 279 Hamap MF_00131 Tryptophan synthase alpha chain [trpA]. 13 268 31.877 T 22-04-2016 IPR002028 Tryptophan synthase, alpha chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20|UniPathway: UPA00035 SRM_RS09645 cf3fcb72f3c2aecee7c3564c45ae119f 279 TIGRFAM TIGR00262 trpA: tryptophan synthase, alpha subunit 14 253 1.9E-68 T 22-04-2016 IPR002028 Tryptophan synthase, alpha chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20|UniPathway: UPA00035 SRM_RS09645 cf3fcb72f3c2aecee7c3564c45ae119f 279 Gene3D G3DSA:3.20.20.70 3 269 4.5E-87 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 SRM_RS09645 cf3fcb72f3c2aecee7c3564c45ae119f 279 SUPERFAMILY SSF51366 1 258 4.87E-77 T 22-04-2016 IPR011060 Ribulose-phosphate binding barrel GO:0003824|GO:0008152 SRM_RS09645 cf3fcb72f3c2aecee7c3564c45ae119f 279 Pfam PF00290 Tryptophan synthase alpha chain 15 257 3.5E-76 T 22-04-2016 IPR002028 Tryptophan synthase, alpha chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20|UniPathway: UPA00035 SRM_RS09645 cf3fcb72f3c2aecee7c3564c45ae119f 279 ProSitePatterns PS00167 Tryptophan synthase alpha chain signature. 47 60 - T 22-04-2016 IPR018204 Tryptophan synthase, alpha chain, active site GO:0004834 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20|UniPathway: UPA00035 SRM_RS09645 cf3fcb72f3c2aecee7c3564c45ae119f 279 PANTHER PTHR10314 22 50 3.0E-23 T 22-04-2016 SRM_RS09645 cf3fcb72f3c2aecee7c3564c45ae119f 279 PANTHER PTHR10314 73 128 3.0E-23 T 22-04-2016 SRM_RS05935 36134e56ef1b90217f60aae436a165de 576 PANTHER PTHR11364 254 358 1.9E-92 T 22-04-2016 SRM_RS05935 36134e56ef1b90217f60aae436a165de 576 PANTHER PTHR11364 374 568 1.9E-92 T 22-04-2016 SRM_RS05935 36134e56ef1b90217f60aae436a165de 576 SMART SM00450 435 563 2.8E-17 T 22-04-2016 IPR001763 Rhodanese-like domain SRM_RS05935 36134e56ef1b90217f60aae436a165de 576 SMART SM00450 273 409 2.3E-9 T 22-04-2016 IPR001763 Rhodanese-like domain SRM_RS05935 36134e56ef1b90217f60aae436a165de 576 SMART SM00450 150 261 1.2E-13 T 22-04-2016 IPR001763 Rhodanese-like domain SRM_RS05935 36134e56ef1b90217f60aae436a165de 576 Gene3D G3DSA:3.40.250.10 149 264 1.0E-16 T 22-04-2016 IPR001763 Rhodanese-like domain SRM_RS05935 36134e56ef1b90217f60aae436a165de 576 Gene3D G3DSA:3.40.250.10 267 426 2.6E-31 T 22-04-2016 IPR001763 Rhodanese-like domain SRM_RS05935 36134e56ef1b90217f60aae436a165de 576 ProSitePatterns PS00683 Rhodanese C-terminal signature. 547 557 - T 22-04-2016 IPR001307 Thiosulphate sulfurtransferase, conserved site GO:0004792 KEGG: 00920+2.8.1.1|MetaCyc: PWY-5350 SRM_RS05935 36134e56ef1b90217f60aae436a165de 576 SUPERFAMILY SSF52821 147 264 6.55E-20 T 22-04-2016 IPR001763 Rhodanese-like domain SRM_RS05935 36134e56ef1b90217f60aae436a165de 576 PANTHER PTHR11364:SF15 254 358 1.9E-92 T 22-04-2016 SRM_RS05935 36134e56ef1b90217f60aae436a165de 576 PANTHER PTHR11364:SF15 374 568 1.9E-92 T 22-04-2016 SRM_RS05935 36134e56ef1b90217f60aae436a165de 576 ProSitePatterns PS00380 Rhodanese signature 1. 308 319 - T 22-04-2016 IPR001307 Thiosulphate sulfurtransferase, conserved site GO:0004792 KEGG: 00920+2.8.1.1|MetaCyc: PWY-5350 SRM_RS05935 36134e56ef1b90217f60aae436a165de 576 SUPERFAMILY SSF52821 271 423 6.29E-22 T 22-04-2016 IPR001763 Rhodanese-like domain SRM_RS05935 36134e56ef1b90217f60aae436a165de 576 SUPERFAMILY SSF52821 438 571 7.33E-31 T 22-04-2016 IPR001763 Rhodanese-like domain SRM_RS05935 36134e56ef1b90217f60aae436a165de 576 Gene3D G3DSA:3.40.250.10 430 569 3.9E-30 T 22-04-2016 IPR001763 Rhodanese-like domain SRM_RS05935 36134e56ef1b90217f60aae436a165de 576 Pfam PF00581 Rhodanese-like domain 158 256 1.3E-9 T 22-04-2016 IPR001763 Rhodanese-like domain SRM_RS05935 36134e56ef1b90217f60aae436a165de 576 Pfam PF00581 Rhodanese-like domain 306 405 7.1E-11 T 22-04-2016 IPR001763 Rhodanese-like domain SRM_RS05935 36134e56ef1b90217f60aae436a165de 576 Pfam PF00581 Rhodanese-like domain 437 559 3.3E-18 T 22-04-2016 IPR001763 Rhodanese-like domain SRM_RS09310 cccae81cbd82267c35d385b377766347 903 Gene3D G3DSA:1.10.1420.10 275 480 2.3E-53 T 22-04-2016 SRM_RS09310 cccae81cbd82267c35d385b377766347 903 SMART SM00533 295 603 3.8E-106 T 22-04-2016 IPR007696 DNA mismatch repair protein MutS, core GO:0005524|GO:0006298|GO:0030983 SRM_RS09310 cccae81cbd82267c35d385b377766347 903 Gene3D G3DSA:3.30.420.110 131 267 4.7E-38 T 22-04-2016 IPR007860 DNA mismatch repair protein MutS, connector domain GO:0005524|GO:0006298|GO:0030983 SRM_RS09310 cccae81cbd82267c35d385b377766347 903 Hamap MF_00096 DNA mismatch repair protein MutS [mutS]. 11 893 25.33 T 22-04-2016 IPR005748 DNA mismatch repair protein MutS, type 1 GO:0005524|GO:0006298|GO:0030983 SRM_RS09310 cccae81cbd82267c35d385b377766347 903 Pfam PF01624 MutS domain I 12 121 4.0E-38 T 22-04-2016 IPR007695 DNA mismatch repair protein MutS-like, N-terminal GO:0005524|GO:0006298|GO:0030983 SRM_RS09310 cccae81cbd82267c35d385b377766347 903 SMART SM00534 622 811 5.7E-114 T 22-04-2016 IPR000432 DNA mismatch repair protein MutS, C-terminal GO:0005524|GO:0006298|GO:0030983 SRM_RS09310 cccae81cbd82267c35d385b377766347 903 SUPERFAMILY SSF55271 8 118 2.62E-37 T 22-04-2016 IPR016151 DNA mismatch repair protein MutS, N-terminal GO:0005524|GO:0006298|GO:0030983 SRM_RS09310 cccae81cbd82267c35d385b377766347 903 ProSitePatterns PS00486 DNA mismatch repair proteins mutS family signature. 703 719 - T 22-04-2016 IPR000432 DNA mismatch repair protein MutS, C-terminal GO:0005524|GO:0006298|GO:0030983 SRM_RS09310 cccae81cbd82267c35d385b377766347 903 Gene3D G3DSA:3.40.50.300 579 815 4.4E-85 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SRM_RS09310 cccae81cbd82267c35d385b377766347 903 PANTHER PTHR11361 12 899 0.0 T 22-04-2016 SRM_RS09310 cccae81cbd82267c35d385b377766347 903 Pfam PF00488 MutS domain V 625 814 1.4E-81 T 22-04-2016 IPR000432 DNA mismatch repair protein MutS, C-terminal GO:0005524|GO:0006298|GO:0030983 SRM_RS09310 cccae81cbd82267c35d385b377766347 903 PIRSF PIRSF037677 4 832 4.4E-170 T 22-04-2016 SRM_RS09310 cccae81cbd82267c35d385b377766347 903 SUPERFAMILY SSF52540 579 815 9.78E-60 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SRM_RS09310 cccae81cbd82267c35d385b377766347 903 TIGRFAM TIGR01070 mutS1: DNA mismatch repair protein MutS 12 898 5.1E-298 T 22-04-2016 IPR005748 DNA mismatch repair protein MutS, type 1 GO:0005524|GO:0006298|GO:0030983 SRM_RS09310 cccae81cbd82267c35d385b377766347 903 PANTHER PTHR11361:SF86 12 899 0.0 T 22-04-2016 SRM_RS09310 cccae81cbd82267c35d385b377766347 903 Pfam PF05190 MutS family domain IV 440 530 5.4E-31 T 22-04-2016 IPR007861 DNA mismatch repair protein MutS, clamp GO:0005524|GO:0006298|GO:0030983 SRM_RS09310 cccae81cbd82267c35d385b377766347 903 Gene3D G3DSA:3.40.1170.10 5 125 1.2E-44 T 22-04-2016 IPR016151 DNA mismatch repair protein MutS, N-terminal GO:0005524|GO:0006298|GO:0030983 SRM_RS09310 cccae81cbd82267c35d385b377766347 903 Pfam PF05188 MutS domain II 133 263 3.6E-25 T 22-04-2016 IPR007860 DNA mismatch repair protein MutS, connector domain GO:0005524|GO:0006298|GO:0030983 SRM_RS09310 cccae81cbd82267c35d385b377766347 903 SUPERFAMILY SSF53150 119 277 2.49E-39 T 22-04-2016 IPR007860 DNA mismatch repair protein MutS, connector domain GO:0005524|GO:0006298|GO:0030983 SRM_RS09310 cccae81cbd82267c35d385b377766347 903 SUPERFAMILY SSF48334 278 577 6.41E-92 T 22-04-2016 IPR007696 DNA mismatch repair protein MutS, core GO:0005524|GO:0006298|GO:0030983 SRM_RS09310 cccae81cbd82267c35d385b377766347 903 Pfam PF05192 MutS domain III 281 571 4.1E-43 T 22-04-2016 IPR007696 DNA mismatch repair protein MutS, core GO:0005524|GO:0006298|GO:0030983 SRM_RS15480 6913c9d7546e5196605eb6c9d7e1f1ea 65 PRINTS PR00064 Ribosomal protein L35 signature 36 54 3.8E-20 T 22-04-2016 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 SRM_RS15480 6913c9d7546e5196605eb6c9d7e1f1ea 65 PRINTS PR00064 Ribosomal protein L35 signature 21 35 3.8E-20 T 22-04-2016 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 SRM_RS15480 6913c9d7546e5196605eb6c9d7e1f1ea 65 PRINTS PR00064 Ribosomal protein L35 signature 3 20 3.8E-20 T 22-04-2016 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 SRM_RS15480 6913c9d7546e5196605eb6c9d7e1f1ea 65 PANTHER PTHR33343 1 63 7.0E-24 T 22-04-2016 SRM_RS15480 6913c9d7546e5196605eb6c9d7e1f1ea 65 Hamap MF_00514 50S ribosomal protein L35 [rpmI]. 1 65 17.951 T 22-04-2016 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 SRM_RS15480 6913c9d7546e5196605eb6c9d7e1f1ea 65 SUPERFAMILY SSF143034 2 63 9.55E-21 T 22-04-2016 SRM_RS15480 6913c9d7546e5196605eb6c9d7e1f1ea 65 Pfam PF01632 Ribosomal protein L35 2 63 1.1E-25 T 22-04-2016 IPR021137 Ribosomal protein L35 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SRM_RS15480 6913c9d7546e5196605eb6c9d7e1f1ea 65 ProSitePatterns PS00936 Ribosomal protein L35 signature. 5 31 - T 22-04-2016 IPR018265 Ribosomal protein L35, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 SRM_RS09935 0f35a267589e10730076bdacbe47e46f 234 PANTHER PTHR24220:SF342 3 228 1.3E-123 T 22-04-2016 SRM_RS09935 0f35a267589e10730076bdacbe47e46f 234 SMART SM00382 30 217 6.8E-12 T 22-04-2016 IPR003593 AAA+ ATPase domain SRM_RS09935 0f35a267589e10730076bdacbe47e46f 234 SUPERFAMILY SSF52540 1 227 1.02E-73 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SRM_RS09935 0f35a267589e10730076bdacbe47e46f 234 Gene3D G3DSA:3.40.50.300 1 225 1.1E-70 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SRM_RS09935 0f35a267589e10730076bdacbe47e46f 234 ProSitePatterns PS00211 ABC transporters family signature. 142 156 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 SRM_RS09935 0f35a267589e10730076bdacbe47e46f 234 PANTHER PTHR24220 3 228 1.3E-123 T 22-04-2016 SRM_RS09935 0f35a267589e10730076bdacbe47e46f 234 Pfam PF00005 ABC transporter 21 169 3.0E-34 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 SRM_RS09425 e4b256d0910e5c82fe588cd4a581c97f 198 Hamap MF_00014 Ribosome maturation factor RimM [rimM]. 27 195 20.465 T 22-04-2016 IPR011961 16S rRNA processing protein RimM GO:0005840|GO:0006364|GO:0043022 SRM_RS09425 e4b256d0910e5c82fe588cd4a581c97f 198 SUPERFAMILY SSF50346 126 195 8.04E-16 T 22-04-2016 IPR011033 PRC-barrel-like SRM_RS09425 e4b256d0910e5c82fe588cd4a581c97f 198 SUPERFAMILY SSF50447 26 117 1.2E-9 T 22-04-2016 IPR009000 Translation protein, beta-barrel domain SRM_RS09425 e4b256d0910e5c82fe588cd4a581c97f 198 Pfam PF01782 RimM N-terminal domain 30 116 2.7E-16 T 22-04-2016 IPR002676 RimM protein GO:0006364 SRM_RS09425 e4b256d0910e5c82fe588cd4a581c97f 198 Gene3D G3DSA:2.30.30.240 126 195 7.3E-17 T 22-04-2016 SRM_RS09425 e4b256d0910e5c82fe588cd4a581c97f 198 Gene3D G3DSA:2.40.30.60 24 117 5.9E-13 T 22-04-2016 IPR002676 RimM protein GO:0006364 SRM_RS09425 e4b256d0910e5c82fe588cd4a581c97f 198 TIGRFAM TIGR02273 16S_RimM: 16S rRNA processing protein RimM 28 194 1.1E-31 T 22-04-2016 IPR011961 16S rRNA processing protein RimM GO:0005840|GO:0006364|GO:0043022 SRM_RS09425 e4b256d0910e5c82fe588cd4a581c97f 198 PANTHER PTHR33692 24 197 7.6E-30 T 22-04-2016 SRM_RS09425 e4b256d0910e5c82fe588cd4a581c97f 198 Pfam PF05239 PRC-barrel domain 123 192 1.3E-4 T 22-04-2016 IPR027275 PRC-barrel domain SRM_RS15560 90cb87644a6fed88cefe81942c05bcb9 611 PANTHER PTHR33361 285 591 6.3E-13 T 22-04-2016 SRM_RS15560 90cb87644a6fed88cefe81942c05bcb9 611 SUPERFAMILY SSF55486 406 587 6.84E-5 T 22-04-2016 SRM_RS15560 90cb87644a6fed88cefe81942c05bcb9 611 Pfam PF05960 Bacterial protein of unknown function (DUF885) 84 589 9.7E-68 T 22-04-2016 IPR010281 Protein of unknown function DUF885 SRM_RS06000 7ed6bbb8a7ffa5e5ae3b96411b0e353e 898 Gene3D G3DSA:2.130.10.10 329 487 1.3E-35 T 22-04-2016 IPR015943 WD40/YVTN repeat-like-containing domain GO:0005515 SRM_RS06000 7ed6bbb8a7ffa5e5ae3b96411b0e353e 898 Gene3D G3DSA:2.130.10.10 47 180 1.3E-35 T 22-04-2016 IPR015943 WD40/YVTN repeat-like-containing domain GO:0005515 SRM_RS06000 7ed6bbb8a7ffa5e5ae3b96411b0e353e 898 SUPERFAMILY SSF82171 293 304 1.71E-29 T 22-04-2016 SRM_RS06000 7ed6bbb8a7ffa5e5ae3b96411b0e353e 898 SUPERFAMILY SSF82171 58 190 1.71E-29 T 22-04-2016 SRM_RS06000 7ed6bbb8a7ffa5e5ae3b96411b0e353e 898 SUPERFAMILY SSF82171 344 515 1.71E-29 T 22-04-2016 SRM_RS06000 7ed6bbb8a7ffa5e5ae3b96411b0e353e 898 SUPERFAMILY SSF82171 548 591 1.71E-29 T 22-04-2016 SRM_RS06000 7ed6bbb8a7ffa5e5ae3b96411b0e353e 898 Pfam PF07676 WD40-like Beta Propeller Repeat 103 138 1.8E-4 T 22-04-2016 IPR011659 WD40-like Beta Propeller SRM_RS06000 7ed6bbb8a7ffa5e5ae3b96411b0e353e 898 Gene3D G3DSA:3.40.50.1820 609 883 3.4E-46 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold SRM_RS06000 7ed6bbb8a7ffa5e5ae3b96411b0e353e 898 PANTHER PTHR11731 797 894 3.0E-47 T 22-04-2016 SRM_RS06000 7ed6bbb8a7ffa5e5ae3b96411b0e353e 898 PANTHER PTHR11731 87 199 3.0E-47 T 22-04-2016 SRM_RS06000 7ed6bbb8a7ffa5e5ae3b96411b0e353e 898 PANTHER PTHR11731 449 513 3.0E-47 T 22-04-2016 SRM_RS06000 7ed6bbb8a7ffa5e5ae3b96411b0e353e 898 PANTHER PTHR11731 582 771 3.0E-47 T 22-04-2016 SRM_RS06000 7ed6bbb8a7ffa5e5ae3b96411b0e353e 898 SUPERFAMILY SSF53474 608 751 5.66E-44 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold SRM_RS06000 7ed6bbb8a7ffa5e5ae3b96411b0e353e 898 SUPERFAMILY SSF53474 793 883 5.66E-44 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold SRM_RS06000 7ed6bbb8a7ffa5e5ae3b96411b0e353e 898 Pfam PF00326 Prolyl oligopeptidase family 654 748 3.4E-19 T 22-04-2016 IPR001375 Peptidase S9, prolyl oligopeptidase, catalytic domain GO:0006508|GO:0008236 SRM_RS06000 7ed6bbb8a7ffa5e5ae3b96411b0e353e 898 Pfam PF00326 Prolyl oligopeptidase family 801 883 1.5E-10 T 22-04-2016 IPR001375 Peptidase S9, prolyl oligopeptidase, catalytic domain GO:0006508|GO:0008236 SRM_RS12020 f15f55c9ae909b639c4bfe8a9e21c9e4 354 Pfam PF10576 Iron-sulfur binding domain of endonuclease III 182 198 2.7E-4 T 22-04-2016 IPR003651 Endonuclease III-like, iron-sulphur cluster loop motif GO:0051539 Reactome: REACT_216 SRM_RS12020 f15f55c9ae909b639c4bfe8a9e21c9e4 354 SMART SM00478 29 180 1.3E-45 T 22-04-2016 IPR003265 HhH-GPD domain GO:0006284 Reactome: REACT_216 SRM_RS12020 f15f55c9ae909b639c4bfe8a9e21c9e4 354 SUPERFAMILY SSF55811 210 343 6.23E-41 T 22-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 SRM_RS12020 f15f55c9ae909b639c4bfe8a9e21c9e4 354 PRINTS PR00502 NUDIX hydrolase family signature 264 279 7.4E-5 T 22-04-2016 IPR020476 NUDIX hydrolase SRM_RS12020 f15f55c9ae909b639c4bfe8a9e21c9e4 354 PRINTS PR00502 NUDIX hydrolase family signature 250 264 7.4E-5 T 22-04-2016 IPR020476 NUDIX hydrolase SRM_RS12020 f15f55c9ae909b639c4bfe8a9e21c9e4 354 SMART SM00525 181 201 3.3E-4 T 22-04-2016 IPR003651 Endonuclease III-like, iron-sulphur cluster loop motif GO:0051539 Reactome: REACT_216 SRM_RS12020 f15f55c9ae909b639c4bfe8a9e21c9e4 354 ProSitePatterns PS00893 Nudix box signature. 255 276 - T 22-04-2016 IPR020084 NUDIX hydrolase, conserved site GO:0016787 SRM_RS12020 f15f55c9ae909b639c4bfe8a9e21c9e4 354 PANTHER PTHR10359 1 328 3.1E-103 T 22-04-2016 SRM_RS12020 f15f55c9ae909b639c4bfe8a9e21c9e4 354 Gene3D G3DSA:1.10.1670.10 113 211 1.7E-42 T 22-04-2016 IPR023170 Helix-turn-helix, base-excision DNA repair, C-terminal SRM_RS12020 f15f55c9ae909b639c4bfe8a9e21c9e4 354 SUPERFAMILY SSF48150 1 211 5.81E-76 T 22-04-2016 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: REACT_216 SRM_RS12020 f15f55c9ae909b639c4bfe8a9e21c9e4 354 Pfam PF00633 Helix-hairpin-helix motif 90 118 1.4E-5 T 22-04-2016 IPR000445 Helix-hairpin-helix motif GO:0003677 SRM_RS12020 f15f55c9ae909b639c4bfe8a9e21c9e4 354 Gene3D G3DSA:3.90.79.10 221 345 2.1E-39 T 22-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 SRM_RS12020 f15f55c9ae909b639c4bfe8a9e21c9e4 354 TIGRFAM TIGR01084 mutY: A/G-specific adenine glycosylase 1 258 2.7E-101 T 22-04-2016 IPR005760 A/G-specific adenine glycosylase MutY GO:0006284|GO:0019104 SRM_RS12020 f15f55c9ae909b639c4bfe8a9e21c9e4 354 Pfam PF00730 HhH-GPD superfamily base excision DNA repair protein 25 157 1.8E-20 T 22-04-2016 IPR003265 HhH-GPD domain GO:0006284 Reactome: REACT_216 SRM_RS12020 f15f55c9ae909b639c4bfe8a9e21c9e4 354 Gene3D G3DSA:1.10.340.30 12 112 5.8E-44 T 22-04-2016 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: REACT_216 SRM_RS12020 f15f55c9ae909b639c4bfe8a9e21c9e4 354 Pfam PF14815 NUDIX domain 225 341 3.1E-25 T 22-04-2016 IPR029119 MutY, C-terminal SRM_RS04310 866f8ce3ca9de28d2ec6625914318304 311 PANTHER PTHR10366 2 309 5.1E-93 T 22-04-2016 SRM_RS04310 866f8ce3ca9de28d2ec6625914318304 311 Gene3D G3DSA:3.40.50.720 1 173 5.3E-50 T 22-04-2016 IPR016040 NAD(P)-binding domain SRM_RS04310 866f8ce3ca9de28d2ec6625914318304 311 Pfam PF01370 NAD dependent epimerase/dehydratase family 3 235 2.6E-60 T 22-04-2016 IPR001509 NAD-dependent epimerase/dehydratase, N-terminal domain GO:0003824|GO:0050662 SRM_RS04310 866f8ce3ca9de28d2ec6625914318304 311 Gene3D G3DSA:3.90.25.10 174 307 3.6E-32 T 22-04-2016 SRM_RS04310 866f8ce3ca9de28d2ec6625914318304 311 PANTHER PTHR10366:SF466 2 309 5.1E-93 T 22-04-2016 SRM_RS04310 866f8ce3ca9de28d2ec6625914318304 311 SUPERFAMILY SSF51735 1 305 3.78E-92 T 22-04-2016 IPR016040 NAD(P)-binding domain SRM_RS09845 5f96ad5853d8bacb841659a06d8834f0 471 Hamap MF_00544 Tryptophanase [tnaA]. 1 454 101.956 T 22-04-2016 IPR013440 Tryptophanase GO:0006568|GO:0009034 KEGG: 00380+4.1.99.1|UniPathway: UPA00332 SRM_RS09845 5f96ad5853d8bacb841659a06d8834f0 471 PANTHER PTHR32325 1 459 2.0E-177 T 22-04-2016 SRM_RS09845 5f96ad5853d8bacb841659a06d8834f0 471 Pfam PF01212 Beta-eliminating lyase 46 420 7.2E-87 T 22-04-2016 IPR001597 Aromatic amino acid beta-eliminating lyase/threonine aldolase GO:0006520|GO:0016829 SRM_RS09845 5f96ad5853d8bacb841659a06d8834f0 471 Gene3D G3DSA:3.40.640.10 38 289 5.4E-36 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 SRM_RS09845 5f96ad5853d8bacb841659a06d8834f0 471 PIRSF PIRSF001386 1 455 1.8E-202 T 22-04-2016 IPR011166 Beta-eliminating lyase family GO:0009072|GO:0016830 KEGG: 00380+4.1.99.1|UniPathway: UPA00332 SRM_RS09845 5f96ad5853d8bacb841659a06d8834f0 471 Gene3D G3DSA:3.90.1150.10 290 453 2.4E-58 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 SRM_RS09845 5f96ad5853d8bacb841659a06d8834f0 471 SUPERFAMILY SSF53383 2 453 1.24E-129 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase SRM_RS09125 2c6eda0346e0d6369f5b0127aa24bc00 333 Pfam PF00248 Aldo/keto reductase family 18 303 2.5E-70 T 22-04-2016 IPR023210 NADP-dependent oxidoreductase domain SRM_RS09125 2c6eda0346e0d6369f5b0127aa24bc00 333 SUPERFAMILY SSF51430 6 312 1.44E-97 T 22-04-2016 IPR023210 NADP-dependent oxidoreductase domain SRM_RS09125 2c6eda0346e0d6369f5b0127aa24bc00 333 Gene3D G3DSA:3.20.20.100 12 317 2.4E-94 T 22-04-2016 IPR023210 NADP-dependent oxidoreductase domain SRM_RS09125 2c6eda0346e0d6369f5b0127aa24bc00 333 PANTHER PTHR11732 4 311 5.4E-118 T 22-04-2016 IPR001395 Aldo/keto reductase/potassium channel subunit beta SRM_RS06675 44c7eb5070bb3c3b0faea421be51d291 142 SUPERFAMILY SSF54919 1 139 3.14E-55 T 22-04-2016 SRM_RS06675 44c7eb5070bb3c3b0faea421be51d291 142 Pfam PF00334 Nucleoside diphosphate kinase 4 138 2.8E-52 T 22-04-2016 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 SRM_RS06675 44c7eb5070bb3c3b0faea421be51d291 142 Gene3D G3DSA:3.30.70.141 1 140 3.1E-58 T 22-04-2016 SRM_RS06675 44c7eb5070bb3c3b0faea421be51d291 142 ProSitePatterns PS00469 Nucleoside diphosphate kinases active site. 114 122 - T 22-04-2016 IPR023005 Nucleoside diphosphate kinase, active site KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 SRM_RS06675 44c7eb5070bb3c3b0faea421be51d291 142 PANTHER PTHR11349 1 139 8.0E-63 T 22-04-2016 SRM_RS06675 44c7eb5070bb3c3b0faea421be51d291 142 PRINTS PR01243 Nucleoside diphosphate kinase signature 6 28 1.5E-32 T 22-04-2016 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 SRM_RS06675 44c7eb5070bb3c3b0faea421be51d291 142 PRINTS PR01243 Nucleoside diphosphate kinase signature 50 69 1.5E-32 T 22-04-2016 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 SRM_RS06675 44c7eb5070bb3c3b0faea421be51d291 142 PRINTS PR01243 Nucleoside diphosphate kinase signature 70 87 1.5E-32 T 22-04-2016 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 SRM_RS06675 44c7eb5070bb3c3b0faea421be51d291 142 PRINTS PR01243 Nucleoside diphosphate kinase signature 114 133 1.5E-32 T 22-04-2016 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 SRM_RS06675 44c7eb5070bb3c3b0faea421be51d291 142 PRINTS PR01243 Nucleoside diphosphate kinase signature 91 107 1.5E-32 T 22-04-2016 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 SRM_RS06675 44c7eb5070bb3c3b0faea421be51d291 142 SMART SM00562 3 140 2.3E-73 T 22-04-2016 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 SRM_RS06675 44c7eb5070bb3c3b0faea421be51d291 142 Hamap MF_00451 Nucleoside diphosphate kinase [ndk]. 3 138 31.866 T 22-04-2016 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 SRM_RS05755 dc8731795cac92881ef7db64abf2571d 510 PANTHER PTHR11907:SF0 6 501 1.5E-207 T 22-04-2016 SRM_RS05755 dc8731795cac92881ef7db64abf2571d 510 PANTHER PTHR11907 6 501 1.5E-207 T 22-04-2016 SRM_RS05755 dc8731795cac92881ef7db64abf2571d 510 Gene3D G3DSA:3.60.20.10 9 320 1.2E-79 T 22-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal SRM_RS05755 dc8731795cac92881ef7db64abf2571d 510 TIGRFAM TIGR01134 purF: amidophosphoribosyltransferase 9 488 3.5E-138 T 22-04-2016 IPR005854 Amidophosphoribosyltransferase GO:0004044|GO:0009113 KEGG: 00230+2.4.2.14|KEGG: 00250+2.4.2.14|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|MetaCyc: PWY-7282|UniPathway: UPA00074 SRM_RS05755 dc8731795cac92881ef7db64abf2571d 510 Pfam PF13537 Glutamine amidotransferase domain 96 221 1.6E-17 T 22-04-2016 IPR017932 Glutamine amidotransferase type 2 domain SRM_RS05755 dc8731795cac92881ef7db64abf2571d 510 PIRSF PIRSF000485 5 503 9.5E-159 T 22-04-2016 IPR005854 Amidophosphoribosyltransferase GO:0004044|GO:0009113 KEGG: 00230+2.4.2.14|KEGG: 00250+2.4.2.14|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|MetaCyc: PWY-7282|UniPathway: UPA00074 SRM_RS05755 dc8731795cac92881ef7db64abf2571d 510 Hamap MF_01931 Amidophosphoribosyltransferase [purF]. 8 489 42.993 T 22-04-2016 IPR005854 Amidophosphoribosyltransferase GO:0004044|GO:0009113 KEGG: 00230+2.4.2.14|KEGG: 00250+2.4.2.14|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|MetaCyc: PWY-7282|UniPathway: UPA00074 SRM_RS05755 dc8731795cac92881ef7db64abf2571d 510 Gene3D G3DSA:3.40.50.2020 321 438 6.7E-15 T 22-04-2016 IPR029057 Phosphoribosyltransferase-like SRM_RS05755 dc8731795cac92881ef7db64abf2571d 510 SUPERFAMILY SSF53271 265 498 3.32E-57 T 22-04-2016 IPR029057 Phosphoribosyltransferase-like SRM_RS05755 dc8731795cac92881ef7db64abf2571d 510 SUPERFAMILY SSF56235 9 271 1.37E-60 T 22-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal SRM_RS07755 09c8f80bd1381eace01b61182b44a660 201 PIRSF PIRSF000847 5 198 1.1E-39 T 22-04-2016 IPR004570 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase GO:0008444|GO:0008654|GO:0016021 KEGG: 00564+2.7.8.5|MetaCyc: PWY-5269|MetaCyc: PWY-5668|UniPathway: UPA00084 SRM_RS07755 09c8f80bd1381eace01b61182b44a660 201 Pfam PF01066 CDP-alcohol phosphatidyltransferase 10 76 1.7E-15 T 22-04-2016 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 SRM_RS07755 09c8f80bd1381eace01b61182b44a660 201 PANTHER PTHR14269 10 138 1.5E-28 T 22-04-2016 SRM_RS07755 09c8f80bd1381eace01b61182b44a660 201 TIGRFAM TIGR00560 pgsA: CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase 10 197 3.2E-33 T 22-04-2016 IPR004570 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase GO:0008444|GO:0008654|GO:0016021 KEGG: 00564+2.7.8.5|MetaCyc: PWY-5269|MetaCyc: PWY-5668|UniPathway: UPA00084 SRM_RS07755 09c8f80bd1381eace01b61182b44a660 201 ProSitePatterns PS00379 CDP-alcohol phosphatidyltransferases signature. 54 76 - T 22-04-2016 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 SRM_RS09560 17ba2043937f791589600885bbeea98b 570 Pfam PF01425 Amidase 147 500 4.6E-65 T 22-04-2016 IPR023631 Amidase signature domain KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 SRM_RS09560 17ba2043937f791589600885bbeea98b 570 PANTHER PTHR11895:SF73 117 567 1.5E-135 T 22-04-2016 SRM_RS09560 17ba2043937f791589600885bbeea98b 570 PANTHER PTHR11895 117 567 1.5E-135 T 22-04-2016 IPR000120 Amidase GO:0016884 KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 SRM_RS09560 17ba2043937f791589600885bbeea98b 570 Gene3D G3DSA:3.90.1300.10 123 569 1.1E-101 T 22-04-2016 IPR023631 Amidase signature domain KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 SRM_RS09560 17ba2043937f791589600885bbeea98b 570 SUPERFAMILY SSF75304 125 568 4.97E-98 T 22-04-2016 IPR023631 Amidase signature domain KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 SRM_RS02980 616b5f5649f5ba09a1d41ba227937490 186 PIRSF PIRSF000194 16 183 2.6E-55 T 22-04-2016 IPR012259 Dihydrofolate reductase GO:0004146|GO:0006545|GO:0009165|GO:0050661|GO:0055114 KEGG: 00670+1.5.1.3|KEGG: 00790+1.5.1.3|MetaCyc: PWY-3841|MetaCyc: PWY-6614|UniPathway: UPA00077 SRM_RS02980 616b5f5649f5ba09a1d41ba227937490 186 PANTHER PTHR22778 18 182 9.3E-32 T 22-04-2016 SRM_RS02980 616b5f5649f5ba09a1d41ba227937490 186 ProSitePatterns PS00075 Dihydrofolate reductase (DHFR) domain signature. 33 55 - T 22-04-2016 IPR017925 Dihydrofolate reductase conserved site GO:0004146|GO:0055114 KEGG: 00670+1.5.1.3|KEGG: 00790+1.5.1.3|MetaCyc: PWY-3841|MetaCyc: PWY-6614|UniPathway: UPA00077 SRM_RS02980 616b5f5649f5ba09a1d41ba227937490 186 PANTHER PTHR22778:SF16 18 182 9.3E-32 T 22-04-2016 SRM_RS02980 616b5f5649f5ba09a1d41ba227937490 186 Gene3D G3DSA:3.40.430.10 17 181 2.8E-48 T 22-04-2016 IPR024072 Dihydrofolate reductase-like domain SRM_RS02980 616b5f5649f5ba09a1d41ba227937490 186 Pfam PF00186 Dihydrofolate reductase 21 180 3.9E-46 T 22-04-2016 IPR001796 Dihydrofolate reductase domain GO:0004146|GO:0006545|GO:0009165|GO:0055114 KEGG: 00670+1.5.1.3|KEGG: 00790+1.5.1.3|MetaCyc: PWY-3841|MetaCyc: PWY-6614|UniPathway: UPA00077 SRM_RS02980 616b5f5649f5ba09a1d41ba227937490 186 PRINTS PR00070 Dihydrofolate reductase signature 60 71 1.7E-12 T 22-04-2016 IPR012259 Dihydrofolate reductase GO:0004146|GO:0006545|GO:0009165|GO:0050661|GO:0055114 KEGG: 00670+1.5.1.3|KEGG: 00790+1.5.1.3|MetaCyc: PWY-3841|MetaCyc: PWY-6614|UniPathway: UPA00077 SRM_RS02980 616b5f5649f5ba09a1d41ba227937490 186 PRINTS PR00070 Dihydrofolate reductase signature 47 55 1.7E-12 T 22-04-2016 IPR012259 Dihydrofolate reductase GO:0004146|GO:0006545|GO:0009165|GO:0050661|GO:0055114 KEGG: 00670+1.5.1.3|KEGG: 00790+1.5.1.3|MetaCyc: PWY-3841|MetaCyc: PWY-6614|UniPathway: UPA00077 SRM_RS02980 616b5f5649f5ba09a1d41ba227937490 186 PRINTS PR00070 Dihydrofolate reductase signature 33 43 1.7E-12 T 22-04-2016 IPR012259 Dihydrofolate reductase GO:0004146|GO:0006545|GO:0009165|GO:0050661|GO:0055114 KEGG: 00670+1.5.1.3|KEGG: 00790+1.5.1.3|MetaCyc: PWY-3841|MetaCyc: PWY-6614|UniPathway: UPA00077 SRM_RS02980 616b5f5649f5ba09a1d41ba227937490 186 PRINTS PR00070 Dihydrofolate reductase signature 116 130 1.7E-12 T 22-04-2016 IPR012259 Dihydrofolate reductase GO:0004146|GO:0006545|GO:0009165|GO:0050661|GO:0055114 KEGG: 00670+1.5.1.3|KEGG: 00790+1.5.1.3|MetaCyc: PWY-3841|MetaCyc: PWY-6614|UniPathway: UPA00077 SRM_RS02980 616b5f5649f5ba09a1d41ba227937490 186 SUPERFAMILY SSF53597 18 181 1.14E-46 T 22-04-2016 IPR024072 Dihydrofolate reductase-like domain SRM_RS01270 2a3b93e6644dd37ef76205a9d1e94a72 358 SUPERFAMILY SSF54106 198 241 4.05E-9 T 22-04-2016 IPR018392 LysM domain SRM_RS01270 2a3b93e6644dd37ef76205a9d1e94a72 358 SMART SM00257 198 241 1.3E-10 T 22-04-2016 IPR018392 LysM domain SRM_RS01270 2a3b93e6644dd37ef76205a9d1e94a72 358 SMART SM00257 148 191 0.62 T 22-04-2016 IPR018392 LysM domain SRM_RS01270 2a3b93e6644dd37ef76205a9d1e94a72 358 SMART SM00257 30 73 3.8E-16 T 22-04-2016 IPR018392 LysM domain SRM_RS01270 2a3b93e6644dd37ef76205a9d1e94a72 358 Gene3D G3DSA:3.10.350.10 30 72 3.8E-19 T 22-04-2016 IPR018392 LysM domain SRM_RS01270 2a3b93e6644dd37ef76205a9d1e94a72 358 Gene3D G3DSA:3.10.350.10 199 242 1.0E-12 T 22-04-2016 IPR018392 LysM domain SRM_RS01270 2a3b93e6644dd37ef76205a9d1e94a72 358 Gene3D G3DSA:3.10.350.10 149 192 1.7E-4 T 22-04-2016 IPR018392 LysM domain SRM_RS01270 2a3b93e6644dd37ef76205a9d1e94a72 358 SUPERFAMILY SSF54106 30 72 5.89E-12 T 22-04-2016 IPR018392 LysM domain SRM_RS01270 2a3b93e6644dd37ef76205a9d1e94a72 358 Pfam PF01476 LysM domain 31 72 2.1E-13 T 22-04-2016 IPR018392 LysM domain SRM_RS01270 2a3b93e6644dd37ef76205a9d1e94a72 358 Pfam PF01476 LysM domain 199 241 2.5E-11 T 22-04-2016 IPR018392 LysM domain SRM_RS01270 2a3b93e6644dd37ef76205a9d1e94a72 358 PANTHER PTHR34183 250 355 1.7E-14 T 22-04-2016 SRM_RS01270 2a3b93e6644dd37ef76205a9d1e94a72 358 Pfam PF03330 Lytic transglycolase 260 338 7.2E-8 T 22-04-2016 IPR009009 RlpA-like protein, double-psi beta-barrel domain SRM_RS02440 ecabe870561807759e9792ff82d377c0 426 PANTHER PTHR11076 5 409 9.1E-118 T 22-04-2016 SRM_RS02440 ecabe870561807759e9792ff82d377c0 426 Pfam PF13438 Domain of unknown function (DUF4113) 372 424 6.7E-21 T 22-04-2016 IPR025188 Domain of unknown function DUF4113 SRM_RS02440 ecabe870561807759e9792ff82d377c0 426 PANTHER PTHR11076:SF40 5 409 9.1E-118 T 22-04-2016 SRM_RS02440 ecabe870561807759e9792ff82d377c0 426 Gene3D G3DSA:1.10.150.20 179 241 1.1E-9 T 22-04-2016 SRM_RS02440 ecabe870561807759e9792ff82d377c0 426 Gene3D G3DSA:3.30.70.270 69 159 1.6E-16 T 22-04-2016 SRM_RS02440 ecabe870561807759e9792ff82d377c0 426 SUPERFAMILY SSF56672 4 241 1.78E-56 T 22-04-2016 SRM_RS02440 ecabe870561807759e9792ff82d377c0 426 Pfam PF11799 impB/mucB/samB family C-terminal domain 246 361 9.3E-10 T 22-04-2016 IPR017961 DNA polymerase, Y-family, little finger domain GO:0003684|GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 SRM_RS02440 ecabe870561807759e9792ff82d377c0 426 Pfam PF00817 impB/mucB/samB family 8 152 5.3E-29 T 22-04-2016 IPR001126 UmuC domain GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 SRM_RS13285 208fe218ae3e41e1ab49b0abe9458da9 481 Pfam PF13450 NAD(P)-binding Rossmann-like domain 8 62 2.0E-11 T 22-04-2016 SRM_RS13285 208fe218ae3e41e1ab49b0abe9458da9 481 PANTHER PTHR10668:SF74 5 476 6.7E-159 T 22-04-2016 SRM_RS13285 208fe218ae3e41e1ab49b0abe9458da9 481 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 392 407 1.7E-5 T 22-04-2016 SRM_RS13285 208fe218ae3e41e1ab49b0abe9458da9 481 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 5 27 1.7E-5 T 22-04-2016 SRM_RS13285 208fe218ae3e41e1ab49b0abe9458da9 481 Gene3D G3DSA:3.50.50.60 195 246 8.1E-22 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SRM_RS13285 208fe218ae3e41e1ab49b0abe9458da9 481 Gene3D G3DSA:3.50.50.60 2 88 8.1E-22 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SRM_RS13285 208fe218ae3e41e1ab49b0abe9458da9 481 PANTHER PTHR10668 5 476 6.7E-159 T 22-04-2016 SRM_RS13285 208fe218ae3e41e1ab49b0abe9458da9 481 SUPERFAMILY SSF51905 433 476 2.36E-31 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SRM_RS13285 208fe218ae3e41e1ab49b0abe9458da9 481 SUPERFAMILY SSF51905 1 304 2.36E-31 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SRM_RS15505 37230712cfcb0957fde8abde3ce2bad1 121 PANTHER PTHR34981 6 112 8.0E-13 T 22-04-2016 SRM_RS15505 37230712cfcb0957fde8abde3ce2bad1 121 PANTHER PTHR34981:SF1 6 112 8.0E-13 T 22-04-2016 SRM_RS15505 37230712cfcb0957fde8abde3ce2bad1 121 Pfam PF05164 Cell division protein ZapA 10 94 7.8E-17 T 22-04-2016 IPR007838 Cell division protein ZapA-like SRM_RS15505 37230712cfcb0957fde8abde3ce2bad1 121 SUPERFAMILY SSF102829 10 97 3.01E-16 T 22-04-2016 IPR007838 Cell division protein ZapA-like SRM_RS09660 7d6bd3835ac9713350fe994987ea4599 649 Gene3D G3DSA:3.40.50.300 206 344 1.8E-39 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SRM_RS09660 7d6bd3835ac9713350fe994987ea4599 649 SMART SM00487 21 215 4.8E-28 T 22-04-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain SRM_RS09660 7d6bd3835ac9713350fe994987ea4599 649 PANTHER PTHR13710:SF81 525 592 8.5E-168 T 22-04-2016 SRM_RS09660 7d6bd3835ac9713350fe994987ea4599 649 PANTHER PTHR13710:SF81 10 348 8.5E-168 T 22-04-2016 SRM_RS09660 7d6bd3835ac9713350fe994987ea4599 649 SUPERFAMILY SSF52540 64 349 3.33E-60 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SRM_RS09660 7d6bd3835ac9713350fe994987ea4599 649 TIGRFAM TIGR00614 recQ_fam: ATP-dependent DNA helicase, RecQ family 16 357 4.5E-114 T 22-04-2016 IPR004589 DNA helicase, ATP-dependent, RecQ type GO:0006310|GO:0008026 SRM_RS09660 7d6bd3835ac9713350fe994987ea4599 649 Pfam PF16124 RecQ zinc-binding 523 573 5.8E-12 T 22-04-2016 IPR032284 ATP-dependent DNA helicase RecQ, zinc-binding domain SRM_RS09660 7d6bd3835ac9713350fe994987ea4599 649 Gene3D G3DSA:1.10.10.10 523 593 1.0E-15 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SRM_RS09660 7d6bd3835ac9713350fe994987ea4599 649 Gene3D G3DSA:3.40.50.300 11 204 1.7E-53 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SRM_RS09660 7d6bd3835ac9713350fe994987ea4599 649 SMART SM00490 248 329 1.5E-24 T 22-04-2016 IPR001650 Helicase, C-terminal SRM_RS09660 7d6bd3835ac9713350fe994987ea4599 649 PANTHER PTHR13710 525 592 8.5E-168 T 22-04-2016 SRM_RS09660 7d6bd3835ac9713350fe994987ea4599 649 PANTHER PTHR13710 10 348 8.5E-168 T 22-04-2016 SRM_RS09660 7d6bd3835ac9713350fe994987ea4599 649 Pfam PF00271 Helicase conserved C-terminal domain 226 329 1.1E-16 T 22-04-2016 IPR001650 Helicase, C-terminal SRM_RS09660 7d6bd3835ac9713350fe994987ea4599 649 Pfam PF00270 DEAD/DEAH box helicase 27 187 2.0E-18 T 22-04-2016 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 SRM_RS08715 7ee56ece1648d2ffdc0349a1ed8c7b2d 248 SUPERFAMILY SSF46785 26 108 2.01E-14 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SRM_RS08715 7ee56ece1648d2ffdc0349a1ed8c7b2d 248 Gene3D G3DSA:1.10.10.10 24 109 1.3E-22 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SRM_RS08715 7ee56ece1648d2ffdc0349a1ed8c7b2d 248 PANTHER PTHR34298 1 204 4.8E-58 T 22-04-2016 SRM_RS08715 7ee56ece1648d2ffdc0349a1ed8c7b2d 248 Pfam PF04079 Segregation and condensation complex subunit ScpB 31 196 3.8E-56 T 22-04-2016 IPR005234 Chromosome segregation/condensation protein ScpB GO:0051304 SRM_RS08715 7ee56ece1648d2ffdc0349a1ed8c7b2d 248 TIGRFAM TIGR00281 TIGR00281: segregation and condensation protein B 28 199 3.1E-37 T 22-04-2016 IPR005234 Chromosome segregation/condensation protein ScpB GO:0051304 SRM_RS08715 7ee56ece1648d2ffdc0349a1ed8c7b2d 248 Gene3D G3DSA:1.10.10.10 112 187 1.4E-30 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SRM_RS08715 7ee56ece1648d2ffdc0349a1ed8c7b2d 248 PANTHER PTHR34298:SF2 1 204 4.8E-58 T 22-04-2016 SRM_RS08715 7ee56ece1648d2ffdc0349a1ed8c7b2d 248 SUPERFAMILY SSF46785 113 187 1.22E-22 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SRM_RS07605 61723c32ab4c96b5b4f16699ebba678b 451 Pfam PF00482 Type II secretion system (T2SS), protein F 111 234 9.5E-17 T 22-04-2016 IPR018076 Type II secretion system F domain SRM_RS07605 61723c32ab4c96b5b4f16699ebba678b 451 Pfam PF00482 Type II secretion system (T2SS), protein F 314 433 3.1E-9 T 22-04-2016 IPR018076 Type II secretion system F domain SRM_RS07605 61723c32ab4c96b5b4f16699ebba678b 451 PANTHER PTHR30012:SF0 52 433 4.1E-63 T 22-04-2016 SRM_RS07605 61723c32ab4c96b5b4f16699ebba678b 451 PANTHER PTHR30012 52 433 4.1E-63 T 22-04-2016 SRM_RS16040 3c87be715b727f193f6166ac3edcbbbe 290 PRINTS PR00727 Bacterial leader peptidase 1 (S26A) family signature 115 127 6.0E-11 T 22-04-2016 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 SRM_RS16040 3c87be715b727f193f6166ac3edcbbbe 290 PRINTS PR00727 Bacterial leader peptidase 1 (S26A) family signature 30 46 6.0E-11 T 22-04-2016 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 SRM_RS16040 3c87be715b727f193f6166ac3edcbbbe 290 PANTHER PTHR12383 4 62 5.0E-29 T 22-04-2016 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 SRM_RS16040 3c87be715b727f193f6166ac3edcbbbe 290 PANTHER PTHR12383 89 161 5.0E-29 T 22-04-2016 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 SRM_RS16040 3c87be715b727f193f6166ac3edcbbbe 290 ProSitePatterns PS00760 Signal peptidases I lysine active site. 117 129 - T 22-04-2016 IPR019757 Peptidase S26A, signal peptidase I, lysine active site GO:0008236|GO:0016021 SRM_RS16040 3c87be715b727f193f6166ac3edcbbbe 290 SUPERFAMILY SSF51306 29 149 6.07E-30 T 22-04-2016 IPR015927 Peptidase S24/S26A/S26B/S26C SRM_RS16040 3c87be715b727f193f6166ac3edcbbbe 290 PANTHER PTHR12383:SF14 4 62 5.0E-29 T 22-04-2016 SRM_RS16040 3c87be715b727f193f6166ac3edcbbbe 290 PANTHER PTHR12383:SF14 89 161 5.0E-29 T 22-04-2016 SRM_RS16040 3c87be715b727f193f6166ac3edcbbbe 290 Pfam PF00717 Peptidase S24-like 37 138 3.5E-18 T 22-04-2016 IPR019759 Peptidase S24/S26A/S26B SRM_RS16040 3c87be715b727f193f6166ac3edcbbbe 290 Gene3D G3DSA:2.10.109.10 27 138 2.3E-26 T 22-04-2016 IPR028360 Peptidase S24/S26, beta-ribbon domain SRM_RS16040 3c87be715b727f193f6166ac3edcbbbe 290 TIGRFAM TIGR02227 sigpep_I_bact: signal peptidase I 13 144 6.0E-28 T 22-04-2016 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 SRM_RS02085 904b6adda23211a4e5f6bae41879f786 223 Gene3D G3DSA:3.30.565.10 64 189 1.7E-7 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SRM_RS02085 904b6adda23211a4e5f6bae41879f786 223 SUPERFAMILY SSF55874 68 187 1.77E-9 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SRM_RS02085 904b6adda23211a4e5f6bae41879f786 223 PANTHER PTHR34220 5 218 8.5E-43 T 22-04-2016 SRM_RS02085 904b6adda23211a4e5f6bae41879f786 223 Pfam PF06580 Histidine kinase 6 91 2.3E-23 T 22-04-2016 IPR010559 Signal transduction histidine kinase, internal region GO:0000155|GO:0000160|GO:0016021 SRM_RS11450 2cc537546f17e8ffa4b0168cbbc85200 1263 Gene3D G3DSA:3.30.450.40 671 848 2.6E-23 T 22-04-2016 IPR029016 GAF domain-like SRM_RS11450 2cc537546f17e8ffa4b0168cbbc85200 1263 Gene3D G3DSA:3.30.450.40 849 1010 1.1E-12 T 22-04-2016 IPR029016 GAF domain-like SRM_RS11450 2cc537546f17e8ffa4b0168cbbc85200 1263 SUPERFAMILY SSF55781 37 173 1.13E-17 T 22-04-2016 IPR029016 GAF domain-like SRM_RS11450 2cc537546f17e8ffa4b0168cbbc85200 1263 Pfam PF13185 GAF domain 699 838 4.5E-14 T 22-04-2016 IPR003018 GAF domain GO:0005515 SRM_RS11450 2cc537546f17e8ffa4b0168cbbc85200 1263 Pfam PF13185 GAF domain 867 996 1.5E-6 T 22-04-2016 IPR003018 GAF domain GO:0005515 SRM_RS11450 2cc537546f17e8ffa4b0168cbbc85200 1263 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 1139 1248 1.4E-23 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SRM_RS11450 2cc537546f17e8ffa4b0168cbbc85200 1263 SUPERFAMILY SSF55874 1083 1250 4.45E-42 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SRM_RS11450 2cc537546f17e8ffa4b0168cbbc85200 1263 SMART SM00387 1138 1250 2.2E-35 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SRM_RS11450 2cc537546f17e8ffa4b0168cbbc85200 1263 Gene3D G3DSA:3.30.565.10 1093 1254 8.7E-41 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SRM_RS11450 2cc537546f17e8ffa4b0168cbbc85200 1263 SUPERFAMILY SSF55781 832 996 5.23E-13 T 22-04-2016 IPR029016 GAF domain-like SRM_RS11450 2cc537546f17e8ffa4b0168cbbc85200 1263 SUPERFAMILY SSF55785 169 278 6.6E-13 T 22-04-2016 IPR000014 PAS domain SRM_RS11450 2cc537546f17e8ffa4b0168cbbc85200 1263 Gene3D G3DSA:3.30.450.40 38 165 2.4E-7 T 22-04-2016 IPR029016 GAF domain-like SRM_RS11450 2cc537546f17e8ffa4b0168cbbc85200 1263 Gene3D G3DSA:3.30.450.20 404 551 4.7E-45 T 22-04-2016 SRM_RS11450 2cc537546f17e8ffa4b0168cbbc85200 1263 SUPERFAMILY SSF55785 279 411 2.62E-21 T 22-04-2016 IPR000014 PAS domain SRM_RS11450 2cc537546f17e8ffa4b0168cbbc85200 1263 SUPERFAMILY SSF55781 698 850 4.36E-25 T 22-04-2016 IPR029016 GAF domain-like SRM_RS11450 2cc537546f17e8ffa4b0168cbbc85200 1263 SMART SM00091 294 363 6.0E-6 T 22-04-2016 IPR000014 PAS domain SRM_RS11450 2cc537546f17e8ffa4b0168cbbc85200 1263 SMART SM00091 177 243 2.5E-10 T 22-04-2016 IPR000014 PAS domain SRM_RS11450 2cc537546f17e8ffa4b0168cbbc85200 1263 SMART SM00091 425 493 0.04 T 22-04-2016 IPR000014 PAS domain SRM_RS11450 2cc537546f17e8ffa4b0168cbbc85200 1263 SMART SM00091 555 624 0.061 T 22-04-2016 IPR000014 PAS domain SRM_RS11450 2cc537546f17e8ffa4b0168cbbc85200 1263 SMART SM00086 632 673 8.7E-8 T 22-04-2016 IPR001610 PAC motif SRM_RS11450 2cc537546f17e8ffa4b0168cbbc85200 1263 SMART SM00086 500 543 1.7E-12 T 22-04-2016 IPR001610 PAC motif SRM_RS11450 2cc537546f17e8ffa4b0168cbbc85200 1263 SMART SM00086 371 413 0.26 T 22-04-2016 IPR001610 PAC motif SRM_RS11450 2cc537546f17e8ffa4b0168cbbc85200 1263 Pfam PF08447 PAS fold 580 667 4.3E-16 T 22-04-2016 IPR013655 PAS fold-3 GO:0005515 SRM_RS11450 2cc537546f17e8ffa4b0168cbbc85200 1263 Pfam PF08447 PAS fold 450 537 1.5E-23 T 22-04-2016 IPR013655 PAS fold-3 GO:0005515 SRM_RS11450 2cc537546f17e8ffa4b0168cbbc85200 1263 SMART SM00065 695 847 3.4E-11 T 22-04-2016 IPR003018 GAF domain GO:0005515 SRM_RS11450 2cc537546f17e8ffa4b0168cbbc85200 1263 SMART SM00065 868 1006 0.091 T 22-04-2016 IPR003018 GAF domain GO:0005515 SRM_RS11450 2cc537546f17e8ffa4b0168cbbc85200 1263 SMART SM00065 36 180 3.0E-4 T 22-04-2016 IPR003018 GAF domain GO:0005515 SRM_RS11450 2cc537546f17e8ffa4b0168cbbc85200 1263 SUPERFAMILY SSF55785 436 545 1.51E-23 T 22-04-2016 IPR000014 PAS domain SRM_RS11450 2cc537546f17e8ffa4b0168cbbc85200 1263 SUPERFAMILY SSF55785 540 671 3.14E-22 T 22-04-2016 IPR000014 PAS domain SRM_RS11450 2cc537546f17e8ffa4b0168cbbc85200 1263 PANTHER PTHR24423 400 690 2.9E-115 T 22-04-2016 SRM_RS11450 2cc537546f17e8ffa4b0168cbbc85200 1263 PANTHER PTHR24423 1016 1258 2.9E-115 T 22-04-2016 SRM_RS11450 2cc537546f17e8ffa4b0168cbbc85200 1263 Gene3D G3DSA:3.30.450.20 552 670 2.6E-25 T 22-04-2016 SRM_RS11450 2cc537546f17e8ffa4b0168cbbc85200 1263 Pfam PF01590 GAF domain 38 165 9.7E-5 T 22-04-2016 IPR003018 GAF domain GO:0005515 SRM_RS11450 2cc537546f17e8ffa4b0168cbbc85200 1263 Gene3D G3DSA:3.30.450.20 169 281 8.9E-24 T 22-04-2016 SRM_RS11450 2cc537546f17e8ffa4b0168cbbc85200 1263 Pfam PF00989 PAS fold 297 410 6.1E-14 T 22-04-2016 IPR013767 PAS fold GO:0006355 SRM_RS11450 2cc537546f17e8ffa4b0168cbbc85200 1263 PRINTS PR00344 Bacterial sensor protein C-terminal signature 1210 1228 8.4E-14 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SRM_RS11450 2cc537546f17e8ffa4b0168cbbc85200 1263 PRINTS PR00344 Bacterial sensor protein C-terminal signature 1234 1247 8.4E-14 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SRM_RS11450 2cc537546f17e8ffa4b0168cbbc85200 1263 PRINTS PR00344 Bacterial sensor protein C-terminal signature 1193 1203 8.4E-14 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SRM_RS11450 2cc537546f17e8ffa4b0168cbbc85200 1263 PRINTS PR00344 Bacterial sensor protein C-terminal signature 1175 1189 8.4E-14 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SRM_RS11450 2cc537546f17e8ffa4b0168cbbc85200 1263 Pfam PF08448 PAS fold 183 284 1.1E-11 T 22-04-2016 IPR013656 PAS fold-4 SRM_RS11450 2cc537546f17e8ffa4b0168cbbc85200 1263 SMART SM00388 1018 1092 9.4E-14 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SRM_RS11450 2cc537546f17e8ffa4b0168cbbc85200 1263 Gene3D G3DSA:3.30.450.20 282 403 3.9E-22 T 22-04-2016 SRM_RS11450 2cc537546f17e8ffa4b0168cbbc85200 1263 Pfam PF00512 His Kinase A (phospho-acceptor) domain 1019 1092 3.3E-13 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SRM_RS11450 2cc537546f17e8ffa4b0168cbbc85200 1263 SUPERFAMILY SSF47384 1003 1093 2.16E-15 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SRM_RS11450 2cc537546f17e8ffa4b0168cbbc85200 1263 Gene3D G3DSA:1.10.287.130 1011 1088 1.6E-15 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SRM_RS11450 2cc537546f17e8ffa4b0168cbbc85200 1263 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 290 419 2.6E-16 T 22-04-2016 IPR000014 PAS domain SRM_RS11450 2cc537546f17e8ffa4b0168cbbc85200 1263 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 554 680 4.9E-16 T 22-04-2016 IPR000014 PAS domain SRM_RS11450 2cc537546f17e8ffa4b0168cbbc85200 1263 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 174 287 6.1E-8 T 22-04-2016 IPR000014 PAS domain SRM_RS11450 2cc537546f17e8ffa4b0168cbbc85200 1263 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 453 550 3.4E-14 T 22-04-2016 IPR000014 PAS domain SRM_RS01135 53216191904a2f6e29930d2a4dc74279 708 SUPERFAMILY SSF53756 27 707 1.29E-183 T 22-04-2016 SRM_RS01135 53216191904a2f6e29930d2a4dc74279 708 TIGRFAM TIGR02094 more_P_ylases: alpha-glucan phosphorylases 113 705 2.3E-231 T 22-04-2016 IPR011834 Alpha-glucan phosphorylase GO:0004645|GO:0005975|GO:0030170 KEGG: 00500+2.4.1.1|MetaCyc: PWY-5941|MetaCyc: PWY-6731|MetaCyc: PWY-6737|MetaCyc: PWY-7238 SRM_RS01135 53216191904a2f6e29930d2a4dc74279 708 PIRSF PIRSF000460 21 707 1.5E-217 T 22-04-2016 IPR000811 Glycosyl transferase, family 35 GO:0005975|GO:0008184 KEGG: 00500+2.4.1.1|MetaCyc: PWY-5941|MetaCyc: PWY-6731|MetaCyc: PWY-6737|MetaCyc: PWY-7238|Reactome: REACT_474 SRM_RS01135 53216191904a2f6e29930d2a4dc74279 708 PANTHER PTHR11468 10 657 1.6E-216 T 22-04-2016 IPR000811 Glycosyl transferase, family 35 GO:0005975|GO:0008184 KEGG: 00500+2.4.1.1|MetaCyc: PWY-5941|MetaCyc: PWY-6731|MetaCyc: PWY-6737|MetaCyc: PWY-7238|Reactome: REACT_474 SRM_RS01135 53216191904a2f6e29930d2a4dc74279 708 Gene3D G3DSA:3.40.50.2000 417 706 9.9E-75 T 22-04-2016 SRM_RS01135 53216191904a2f6e29930d2a4dc74279 708 PANTHER PTHR11468:SF9 10 657 1.6E-216 T 22-04-2016 SRM_RS01135 53216191904a2f6e29930d2a4dc74279 708 Gene3D G3DSA:3.40.50.2000 39 416 9.5E-60 T 22-04-2016 SRM_RS01135 53216191904a2f6e29930d2a4dc74279 708 Pfam PF11897 Protein of unknown function (DUF3417) 33 125 2.5E-22 T 22-04-2016 IPR024517 Glycogen phosphorylase, domain of unknown function DUF3417 KEGG: 00500+2.4.1.1|MetaCyc: PWY-5941|MetaCyc: PWY-6731|MetaCyc: PWY-6737|MetaCyc: PWY-7238 SRM_RS01135 53216191904a2f6e29930d2a4dc74279 708 Pfam PF00343 Carbohydrate phosphorylase 277 613 1.2E-9 T 22-04-2016 IPR000811 Glycosyl transferase, family 35 GO:0005975|GO:0008184 KEGG: 00500+2.4.1.1|MetaCyc: PWY-5941|MetaCyc: PWY-6731|MetaCyc: PWY-6737|MetaCyc: PWY-7238|Reactome: REACT_474 SRM_RS13460 1aba734b9e3979fa1b12d4497aeec83e 302 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 8.8E-7 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 SRM_RS13460 1aba734b9e3979fa1b12d4497aeec83e 302 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 8.8E-7 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 SRM_RS13460 1aba734b9e3979fa1b12d4497aeec83e 302 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 8.8E-7 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 SRM_RS13460 1aba734b9e3979fa1b12d4497aeec83e 302 SUPERFAMILY SSF46785 1 86 5.59E-20 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SRM_RS13460 1aba734b9e3979fa1b12d4497aeec83e 302 Gene3D G3DSA:3.40.190.10 176 269 4.7E-26 T 22-04-2016 SRM_RS13460 1aba734b9e3979fa1b12d4497aeec83e 302 PANTHER PTHR30419 1 278 1.2E-78 T 22-04-2016 SRM_RS13460 1aba734b9e3979fa1b12d4497aeec83e 302 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 62 4.4E-18 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 SRM_RS13460 1aba734b9e3979fa1b12d4497aeec83e 302 Pfam PF03466 LysR substrate binding domain 88 292 1.8E-40 T 22-04-2016 IPR005119 LysR, substrate-binding SRM_RS13460 1aba734b9e3979fa1b12d4497aeec83e 302 SUPERFAMILY SSF53850 89 298 1.81E-36 T 22-04-2016 SRM_RS13460 1aba734b9e3979fa1b12d4497aeec83e 302 Gene3D G3DSA:1.10.10.10 1 84 1.3E-24 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SRM_RS13460 1aba734b9e3979fa1b12d4497aeec83e 302 PANTHER PTHR30419:SF4 1 278 1.2E-78 T 22-04-2016 SRM_RS13460 1aba734b9e3979fa1b12d4497aeec83e 302 Gene3D G3DSA:3.40.190.10 90 175 2.3E-18 T 22-04-2016 SRM_RS03975 f792d0d154bc3cdf0e385c2b7ef78d05 209 PANTHER PTHR23416:SF23 95 206 6.0E-24 T 22-04-2016 SRM_RS03975 f792d0d154bc3cdf0e385c2b7ef78d05 209 Gene3D G3DSA:3.40.50.20 5 84 9.4E-9 T 22-04-2016 IPR016185 Pre-ATP-grasp domain SRM_RS03975 f792d0d154bc3cdf0e385c2b7ef78d05 209 SUPERFAMILY SSF51161 5 207 2.22E-41 T 22-04-2016 IPR011004 Trimeric LpxA-like SRM_RS03975 f792d0d154bc3cdf0e385c2b7ef78d05 209 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 122 157 5.8E-6 T 22-04-2016 IPR001451 Hexapeptide repeat SRM_RS03975 f792d0d154bc3cdf0e385c2b7ef78d05 209 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 159 191 1.9E-5 T 22-04-2016 IPR001451 Hexapeptide repeat SRM_RS03975 f792d0d154bc3cdf0e385c2b7ef78d05 209 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 149 177 - T 22-04-2016 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: REACT_17015 SRM_RS03975 f792d0d154bc3cdf0e385c2b7ef78d05 209 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 167 195 - T 22-04-2016 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: REACT_17015 SRM_RS03975 f792d0d154bc3cdf0e385c2b7ef78d05 209 TIGRFAM TIGR03570 NeuD_NnaD: sugar O-acyltransferase, sialic acid O-acetyltransferase NeuD family 6 206 1.4E-66 T 22-04-2016 IPR020019 Sialic acid O-acyltransferase NeuD-like SRM_RS03975 f792d0d154bc3cdf0e385c2b7ef78d05 209 PANTHER PTHR23416 95 206 6.0E-24 T 22-04-2016 SRM_RS03975 f792d0d154bc3cdf0e385c2b7ef78d05 209 Gene3D G3DSA:2.160.10.10 85 207 2.4E-33 T 22-04-2016 SRM_RS06515 a0a86aa1d1f8e919ae866ae06064970f 69 Hamap MF_00374 50S ribosomal protein L29 [rpmC]. 1 61 15.164 T 22-04-2016 IPR001854 Ribosomal protein L29 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SRM_RS06515 a0a86aa1d1f8e919ae866ae06064970f 69 Gene3D G3DSA:1.10.287.310 1 62 3.1E-17 T 22-04-2016 IPR001854 Ribosomal protein L29 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SRM_RS06515 a0a86aa1d1f8e919ae866ae06064970f 69 Pfam PF00831 Ribosomal L29 protein 5 61 9.4E-16 T 22-04-2016 IPR001854 Ribosomal protein L29 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SRM_RS06515 a0a86aa1d1f8e919ae866ae06064970f 69 SUPERFAMILY SSF46561 1 62 2.22E-15 T 22-04-2016 IPR001854 Ribosomal protein L29 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SRM_RS06515 a0a86aa1d1f8e919ae866ae06064970f 69 TIGRFAM TIGR00012 L29: ribosomal protein uL29 5 61 1.9E-14 T 22-04-2016 IPR001854 Ribosomal protein L29 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SRM_RS04440 18a5e22f34f61261eb8c2331f50dc6a5 151 SUPERFAMILY SSF48600 41 129 6.56E-22 T 22-04-2016 IPR020822 Chorismate mutase, type II GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626|UniPathway: UPA00120 SRM_RS04440 18a5e22f34f61261eb8c2331f50dc6a5 151 Pfam PF01817 Chorismate mutase type II 38 115 1.7E-17 T 22-04-2016 IPR020822 Chorismate mutase, type II GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626|UniPathway: UPA00120 SRM_RS04440 18a5e22f34f61261eb8c2331f50dc6a5 151 PANTHER PTHR38041 38 130 1.7E-13 T 22-04-2016 SRM_RS04440 18a5e22f34f61261eb8c2331f50dc6a5 151 SMART SM00830 38 118 4.3E-24 T 22-04-2016 IPR002701 Chorismate mutase GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626|UniPathway: UPA00120 SRM_RS04440 18a5e22f34f61261eb8c2331f50dc6a5 151 Gene3D G3DSA:1.20.59.10 26 116 3.1E-17 T 22-04-2016 IPR002701 Chorismate mutase GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626|UniPathway: UPA00120 SRM_RS10130 f23530cc5cad91b593c0d9fc95e40cc5 495 Pfam PF01940 Integral membrane protein DUF92 242 482 1.2E-43 T 22-04-2016 IPR002794 Protein of unknown function DUF92, TMEM19 GO:0016021 SRM_RS10130 f23530cc5cad91b593c0d9fc95e40cc5 495 PANTHER PTHR13353:SF5 237 443 9.5E-19 T 22-04-2016 SRM_RS10130 f23530cc5cad91b593c0d9fc95e40cc5 495 PANTHER PTHR13353 237 443 9.5E-19 T 22-04-2016 IPR002794 Protein of unknown function DUF92, TMEM19 GO:0016021 SRM_RS06985 4fadc888392bace30d720129d872410f 612 SUPERFAMILY SSF69318 51 206 1.41E-14 T 22-04-2016 SRM_RS06985 4fadc888392bace30d720129d872410f 612 Gene3D G3DSA:2.130.10.130 233 504 2.5E-21 T 22-04-2016 SRM_RS06985 4fadc888392bace30d720129d872410f 612 Gene3D G3DSA:2.130.10.130 527 601 2.7E-8 T 22-04-2016 SRM_RS06985 4fadc888392bace30d720129d872410f 612 Gene3D G3DSA:2.130.10.130 69 203 2.2E-5 T 22-04-2016 SRM_RS06985 4fadc888392bace30d720129d872410f 612 SUPERFAMILY SSF69318 242 604 3.79E-45 T 22-04-2016 SRM_RS06985 4fadc888392bace30d720129d872410f 612 Pfam PF13517 Repeat domain in Vibrio, Colwellia, Bradyrhizobium and Shewanella 532 595 2.4E-12 T 22-04-2016 SRM_RS06985 4fadc888392bace30d720129d872410f 612 Pfam PF13517 Repeat domain in Vibrio, Colwellia, Bradyrhizobium and Shewanella 309 381 2.1E-6 T 22-04-2016 SRM_RS06985 4fadc888392bace30d720129d872410f 612 Pfam PF13517 Repeat domain in Vibrio, Colwellia, Bradyrhizobium and Shewanella 429 490 2.2E-8 T 22-04-2016 SRM_RS04860 e32130bd9a9f65ec3ff9824e60018d66 283 Gene3D G3DSA:3.30.70.120 211 282 8.7E-26 T 22-04-2016 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal SRM_RS04860 e32130bd9a9f65ec3ff9824e60018d66 283 TIGRFAM TIGR03455 HisG_C-term: ATP phosphoribosyltransferase, C-terminal domain 190 282 4.1E-30 T 22-04-2016 IPR013115 Histidine biosynthesis HisG, C-terminal GO:0000105|GO:0000287|GO:0003879|GO:0005737 KEGG: 00340+2.4.2.17|UniPathway: UPA00031 SRM_RS04860 e32130bd9a9f65ec3ff9824e60018d66 283 Pfam PF08029 HisG, C-terminal domain 208 279 5.4E-25 T 22-04-2016 IPR013115 Histidine biosynthesis HisG, C-terminal GO:0000105|GO:0000287|GO:0003879|GO:0005737 KEGG: 00340+2.4.2.17|UniPathway: UPA00031 SRM_RS04860 e32130bd9a9f65ec3ff9824e60018d66 283 PANTHER PTHR21403:SF0 1 283 1.1E-88 T 22-04-2016 SRM_RS04860 e32130bd9a9f65ec3ff9824e60018d66 283 ProSitePatterns PS01316 ATP phosphoribosyltransferase signature. 142 163 - T 22-04-2016 IPR018198 ATP phosphoribosyltransferase, conserved site GO:0003879 KEGG: 00340+2.4.2.17|UniPathway: UPA00031 SRM_RS04860 e32130bd9a9f65ec3ff9824e60018d66 283 Pfam PF01634 ATP phosphoribosyltransferase 49 204 3.2E-41 T 22-04-2016 IPR013820 ATP phosphoribosyltransferase, catalytic domain GO:0000105|GO:0003879|GO:0005737 KEGG: 00340+2.4.2.17|UniPathway: UPA00031 SRM_RS04860 e32130bd9a9f65ec3ff9824e60018d66 283 Gene3D G3DSA:3.40.190.10 1 141 9.3E-37 T 22-04-2016 SRM_RS04860 e32130bd9a9f65ec3ff9824e60018d66 283 PANTHER PTHR21403 1 283 1.1E-88 T 22-04-2016 IPR001348 ATP phosphoribosyltransferase HisG GO:0000105|GO:0003879 KEGG: 00340+2.4.2.17|UniPathway: UPA00031 SRM_RS04860 e32130bd9a9f65ec3ff9824e60018d66 283 SUPERFAMILY SSF54913 211 282 3.45E-20 T 22-04-2016 IPR011322 Nitrogen regulatory PII-like, alpha/beta SRM_RS04860 e32130bd9a9f65ec3ff9824e60018d66 283 TIGRFAM TIGR00070 hisG: ATP phosphoribosyltransferase 2 184 5.4E-56 T 22-04-2016 IPR013820 ATP phosphoribosyltransferase, catalytic domain GO:0000105|GO:0003879|GO:0005737 KEGG: 00340+2.4.2.17|UniPathway: UPA00031 SRM_RS04860 e32130bd9a9f65ec3ff9824e60018d66 283 Hamap MF_00079 ATP phosphoribosyltransferase [hisG]. 1 283 29.796 T 22-04-2016 IPR020621 ATP phosphoribosyltransferase HisG, long form GO:0000105|GO:0003879 KEGG: 00340+2.4.2.17|UniPathway: UPA00031 SRM_RS04860 e32130bd9a9f65ec3ff9824e60018d66 283 SUPERFAMILY SSF53850 1 200 3.02E-54 T 22-04-2016 SRM_RS15280 f748261fd5eceb4b86f798b8790f50c5 297 SUPERFAMILY SSF52096 12 295 1.24E-73 T 22-04-2016 IPR029045 ClpP/crotonase-like domain SRM_RS15280 f748261fd5eceb4b86f798b8790f50c5 297 Gene3D G3DSA:3.90.226.10 18 233 5.0E-63 T 22-04-2016 IPR029045 ClpP/crotonase-like domain SRM_RS15280 f748261fd5eceb4b86f798b8790f50c5 297 PANTHER PTHR11941 7 290 5.7E-152 T 22-04-2016 SRM_RS15280 f748261fd5eceb4b86f798b8790f50c5 297 Gene3D G3DSA:1.10.12.10 236 284 7.0E-30 T 22-04-2016 IPR014748 Crontonase, C-terminal SRM_RS15280 f748261fd5eceb4b86f798b8790f50c5 297 PANTHER PTHR11941:SF20 7 290 5.7E-152 T 22-04-2016 SRM_RS15280 f748261fd5eceb4b86f798b8790f50c5 297 TIGRFAM TIGR01929 menB: naphthoate synthase 19 291 1.8E-119 T 22-04-2016 IPR010198 1,4-Dihydroxy-2-naphthoyl-CoA synthase, MenB GO:0008935|GO:0009234 KEGG: 00130+4.1.3.36|MetaCyc: PWY-5837|UniPathway: UPA00079|UniPathway: UPA01057 SRM_RS15280 f748261fd5eceb4b86f798b8790f50c5 297 Hamap MF_01934 1,4-dihydroxy-2-naphthoyl-CoA synthase [menB]. 11 296 51.992 T 22-04-2016 IPR010198 1,4-Dihydroxy-2-naphthoyl-CoA synthase, MenB GO:0008935|GO:0009234 KEGG: 00130+4.1.3.36|MetaCyc: PWY-5837|UniPathway: UPA00079|UniPathway: UPA01057 SRM_RS15280 f748261fd5eceb4b86f798b8790f50c5 297 Pfam PF00378 Enoyl-CoA hydratase/isomerase 31 292 1.6E-52 T 22-04-2016 IPR001753 Crotonase superfamily GO:0003824|GO:0008152 SRM_RS12385 9ae55fb3f982947c36ae20623211a15f 143 Gene3D G3DSA:2.40.50.140 39 115 2.4E-12 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold SRM_RS12385 9ae55fb3f982947c36ae20623211a15f 143 Pfam PF03100 CcmE 3 119 3.1E-19 T 22-04-2016 IPR004329 CcmE/CycJ protein GO:0005886|GO:0017003|GO:0017004 SRM_RS12385 9ae55fb3f982947c36ae20623211a15f 143 SUPERFAMILY SSF82093 16 122 1.31E-21 T 22-04-2016 IPR004329 CcmE/CycJ protein GO:0005886|GO:0017003|GO:0017004 SRM_RS08945 5683f28c9c298faa726ad055bdaa0a98 316 Pfam PF03009 Glycerophosphoryl diester phosphodiesterase family 72 177 2.5E-22 T 22-04-2016 IPR030395 Glycerophosphodiester phosphodiesterase domain GO:0006629|GO:0008081 SRM_RS08945 5683f28c9c298faa726ad055bdaa0a98 316 PANTHER PTHR23344 62 225 4.4E-28 T 22-04-2016 IPR004129 Glycerophosphoryl diester phosphodiesterase GO:0008889 SRM_RS08945 5683f28c9c298faa726ad055bdaa0a98 316 PANTHER PTHR23344 241 253 4.4E-28 T 22-04-2016 IPR004129 Glycerophosphoryl diester phosphodiesterase GO:0008889 SRM_RS08945 5683f28c9c298faa726ad055bdaa0a98 316 SUPERFAMILY SSF51695 66 305 2.38E-43 T 22-04-2016 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain GO:0006629|GO:0008081 SRM_RS08945 5683f28c9c298faa726ad055bdaa0a98 316 Gene3D G3DSA:3.20.20.190 59 309 6.8E-43 T 22-04-2016 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain GO:0006629|GO:0008081 SRM_RS07510 46ac7dc14057d31168077daca0b7a6d1 283 Pfam PF12412 Protein of unknown function (DUF3667) 63 107 2.9E-11 T 22-04-2016 IPR022134 Protein of unknown function DUF3667 SRM_RS13180 769cad3f63fa6a75de807853501b19b8 400 Hamap MF_00081 Heat-inducible transcription repressor HrcA [hrcA]. 49 382 26.952 T 22-04-2016 IPR002571 Heat-inducible transcription repressor HrcA GO:0003677|GO:0006355 SRM_RS13180 769cad3f63fa6a75de807853501b19b8 400 PANTHER PTHR34824 38 398 7.5E-96 T 22-04-2016 SRM_RS13180 769cad3f63fa6a75de807853501b19b8 400 SUPERFAMILY SSF55781 119 387 2.55E-51 T 22-04-2016 IPR029016 GAF domain-like SRM_RS13180 769cad3f63fa6a75de807853501b19b8 400 SUPERFAMILY SSF46785 50 134 6.35E-20 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SRM_RS13180 769cad3f63fa6a75de807853501b19b8 400 Gene3D G3DSA:1.10.10.10 44 131 1.0E-32 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SRM_RS13180 769cad3f63fa6a75de807853501b19b8 400 PIRSF PIRSF005485 47 393 6.2E-87 T 22-04-2016 IPR002571 Heat-inducible transcription repressor HrcA GO:0003677|GO:0006355 SRM_RS13180 769cad3f63fa6a75de807853501b19b8 400 Gene3D G3DSA:3.30.450.40 225 387 1.0E-35 T 22-04-2016 IPR029016 GAF domain-like SRM_RS13180 769cad3f63fa6a75de807853501b19b8 400 Pfam PF01628 HrcA protein C terminal domain 152 374 3.0E-53 T 22-04-2016 IPR021153 Heat-inducible transcription repressor HrcA, C-terminal GO:0003677|GO:0006355 SRM_RS13180 769cad3f63fa6a75de807853501b19b8 400 TIGRFAM TIGR00331 hrcA: heat-inducible transcription repressor HrcA 51 386 6.5E-91 T 22-04-2016 IPR002571 Heat-inducible transcription repressor HrcA GO:0003677|GO:0006355 SRM_RS10305 1572467c1bbb4f9bf697a4dafd510b01 673 PANTHER PTHR23408:SF13 211 648 3.8E-79 T 22-04-2016 SRM_RS10305 1572467c1bbb4f9bf697a4dafd510b01 673 Gene3D G3DSA:3.40.50.280 535 667 1.3E-27 T 22-04-2016 IPR006158 Cobalamin (vitamin B12)-binding domain GO:0031419|GO:0046872 SRM_RS10305 1572467c1bbb4f9bf697a4dafd510b01 673 PANTHER PTHR23408 211 648 3.8E-79 T 22-04-2016 SRM_RS10305 1572467c1bbb4f9bf697a4dafd510b01 673 Gene3D G3DSA:3.20.20.240 41 484 3.5E-99 T 22-04-2016 IPR014348 Cobalamin (vitamin B12)-dependent enzyme, catalytic subdomain GO:0008152|GO:0016866|GO:0031419 SRM_RS10305 1572467c1bbb4f9bf697a4dafd510b01 673 SUPERFAMILY SSF52242 514 667 5.63E-31 T 22-04-2016 IPR006158 Cobalamin (vitamin B12)-binding domain GO:0031419|GO:0046872 SRM_RS10305 1572467c1bbb4f9bf697a4dafd510b01 673 Pfam PF01642 Methylmalonyl-CoA mutase 63 578 5.3E-95 T 22-04-2016 IPR006099 Methylmalonyl-CoA mutase, alpha/beta chain, catalytic GO:0008152|GO:0016866|GO:0031419 SRM_RS10305 1572467c1bbb4f9bf697a4dafd510b01 673 SUPERFAMILY SSF51703 9 470 6.28E-110 T 22-04-2016 IPR016176 Cobalamin (vitamin B12)-dependent enzyme, catalytic GO:0003824|GO:0008152|GO:0031419 SRM_RS10305 1572467c1bbb4f9bf697a4dafd510b01 673 SUPERFAMILY SSF51703 516 571 6.28E-110 T 22-04-2016 IPR016176 Cobalamin (vitamin B12)-dependent enzyme, catalytic GO:0003824|GO:0008152|GO:0031419 SRM_RS15910 debccf611bcf481cf72c25e8e00f1e6e 302 PANTHER PTHR10605:SF40 146 211 2.1E-25 T 22-04-2016 SRM_RS15910 debccf611bcf481cf72c25e8e00f1e6e 302 PANTHER PTHR10605:SF40 10 127 2.1E-25 T 22-04-2016 SRM_RS15910 debccf611bcf481cf72c25e8e00f1e6e 302 SUPERFAMILY SSF52540 7 298 5.12E-48 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SRM_RS15910 debccf611bcf481cf72c25e8e00f1e6e 302 Gene3D G3DSA:3.40.50.300 5 296 1.9E-48 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SRM_RS15910 debccf611bcf481cf72c25e8e00f1e6e 302 Pfam PF00685 Sulfotransferase domain 10 204 7.0E-12 T 22-04-2016 IPR000863 Sulfotransferase domain GO:0008146 SRM_RS15910 debccf611bcf481cf72c25e8e00f1e6e 302 PANTHER PTHR10605 146 211 2.1E-25 T 22-04-2016 SRM_RS15910 debccf611bcf481cf72c25e8e00f1e6e 302 PANTHER PTHR10605 10 127 2.1E-25 T 22-04-2016 SRM_RS06555 b8278417eba9f2a269436d3a969f718f 119 Pfam PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast 7 119 1.3E-40 T 22-04-2016 IPR005484 Ribosomal protein L18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SRM_RS06555 b8278417eba9f2a269436d3a969f718f 119 TIGRFAM TIGR00060 L18_bact: ribosomal protein uL18 6 119 5.1E-36 T 22-04-2016 IPR004389 Ribosomal protein L18, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 SRM_RS06555 b8278417eba9f2a269436d3a969f718f 119 Gene3D G3DSA:3.30.420.100 25 119 3.0E-34 T 22-04-2016 SRM_RS06555 b8278417eba9f2a269436d3a969f718f 119 PANTHER PTHR12899 10 119 8.4E-34 T 22-04-2016 SRM_RS06555 b8278417eba9f2a269436d3a969f718f 119 Hamap MF_01337_B 50S ribosomal protein L18 [rplR]. 7 119 25.231 T 22-04-2016 IPR004389 Ribosomal protein L18, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 SRM_RS06555 b8278417eba9f2a269436d3a969f718f 119 SUPERFAMILY SSF53137 8 117 6.32E-43 T 22-04-2016 SRM_RS11380 386f615e95f62c13441a5047dbac20a1 1207 PANTHER PTHR10322:SF23 205 542 2.7E-43 T 22-04-2016 SRM_RS11380 386f615e95f62c13441a5047dbac20a1 1207 PANTHER PTHR10322:SF23 84 95 2.7E-43 T 22-04-2016 SRM_RS11380 386f615e95f62c13441a5047dbac20a1 1207 PANTHER PTHR10322:SF23 901 1153 2.7E-43 T 22-04-2016 SRM_RS11380 386f615e95f62c13441a5047dbac20a1 1207 SUPERFAMILY SSF56672 904 1165 2.37E-68 T 22-04-2016 SRM_RS11380 386f615e95f62c13441a5047dbac20a1 1207 SUPERFAMILY SSF56672 428 545 2.37E-68 T 22-04-2016 SRM_RS11380 386f615e95f62c13441a5047dbac20a1 1207 SUPERFAMILY SSF53098 91 449 8.18E-50 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 SRM_RS11380 386f615e95f62c13441a5047dbac20a1 1207 PANTHER PTHR10322 205 542 2.7E-43 T 22-04-2016 SRM_RS11380 386f615e95f62c13441a5047dbac20a1 1207 PANTHER PTHR10322 84 95 2.7E-43 T 22-04-2016 SRM_RS11380 386f615e95f62c13441a5047dbac20a1 1207 PANTHER PTHR10322 901 1153 2.7E-43 T 22-04-2016 SRM_RS11380 386f615e95f62c13441a5047dbac20a1 1207 SMART SM00306 542 645 3.2E-7 T 22-04-2016 IPR003587 Hint domain N-terminal SRM_RS11380 386f615e95f62c13441a5047dbac20a1 1207 Gene3D G3DSA:2.170.16.10 861 893 1.7E-14 T 22-04-2016 IPR028992 Hedgehog/Intein (Hint) domain SRM_RS11380 386f615e95f62c13441a5047dbac20a1 1207 Gene3D G3DSA:2.170.16.10 544 655 1.7E-14 T 22-04-2016 IPR028992 Hedgehog/Intein (Hint) domain SRM_RS11380 386f615e95f62c13441a5047dbac20a1 1207 Gene3D G3DSA:3.90.1600.10 916 1017 5.7E-7 T 22-04-2016 IPR023211 DNA polymerase, palm domain KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 SRM_RS11380 386f615e95f62c13441a5047dbac20a1 1207 Gene3D G3DSA:3.90.1600.10 453 489 5.7E-7 T 22-04-2016 IPR023211 DNA polymerase, palm domain KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 SRM_RS11380 386f615e95f62c13441a5047dbac20a1 1207 Pfam PF03104 DNA polymerase family B, exonuclease domain 206 357 3.6E-13 T 22-04-2016 IPR006133 DNA-directed DNA polymerase, family B, exonuclease domain GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 SRM_RS11380 386f615e95f62c13441a5047dbac20a1 1207 Pfam PF00136 DNA polymerase family B 896 1154 1.7E-12 T 22-04-2016 IPR006134 DNA-directed DNA polymerase, family B, multifunctional domain GO:0000166|GO:0003677 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 SRM_RS11380 386f615e95f62c13441a5047dbac20a1 1207 Pfam PF00136 DNA polymerase family B 500 544 2.3E-4 T 22-04-2016 IPR006134 DNA-directed DNA polymerase, family B, multifunctional domain GO:0000166|GO:0003677 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 SRM_RS11380 386f615e95f62c13441a5047dbac20a1 1207 SUPERFAMILY SSF51294 544 657 2.35E-16 T 22-04-2016 IPR028992 Hedgehog/Intein (Hint) domain SRM_RS11380 386f615e95f62c13441a5047dbac20a1 1207 SUPERFAMILY SSF51294 851 891 2.35E-16 T 22-04-2016 IPR028992 Hedgehog/Intein (Hint) domain SRM_RS11380 386f615e95f62c13441a5047dbac20a1 1207 Gene3D G3DSA:3.30.420.10 206 423 1.5E-28 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 SRM_RS11380 386f615e95f62c13441a5047dbac20a1 1207 SMART SM00486 205 959 4.0E-14 T 22-04-2016 IPR006172 DNA-directed DNA polymerase, family B GO:0000166|GO:0003676|GO:0003887 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 SRM_RS05845 0f4559457055406164d7da54841c743a 190 SUPERFAMILY SSF47928 2 107 2.22E-20 T 22-04-2016 IPR026015 F1F0 ATP synthase OSCP/delta subunit, N-terminal domain SRM_RS05845 0f4559457055406164d7da54841c743a 190 PRINTS PR00125 ATP synthase delta subunit signature 6 25 8.7E-24 T 22-04-2016 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 SRM_RS05845 0f4559457055406164d7da54841c743a 190 PRINTS PR00125 ATP synthase delta subunit signature 151 169 8.7E-24 T 22-04-2016 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 SRM_RS05845 0f4559457055406164d7da54841c743a 190 PRINTS PR00125 ATP synthase delta subunit signature 136 151 8.7E-24 T 22-04-2016 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 SRM_RS05845 0f4559457055406164d7da54841c743a 190 PRINTS PR00125 ATP synthase delta subunit signature 75 86 8.7E-24 T 22-04-2016 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 SRM_RS05845 0f4559457055406164d7da54841c743a 190 PRINTS PR00125 ATP synthase delta subunit signature 86 100 8.7E-24 T 22-04-2016 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 SRM_RS05845 0f4559457055406164d7da54841c743a 190 Hamap MF_01416 ATP synthase subunit delta [atpD]. 2 178 19.45 T 22-04-2016 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 SRM_RS05845 0f4559457055406164d7da54841c743a 190 TIGRFAM TIGR01145 ATP_synt_delta: ATP synthase F1, delta subunit 6 176 4.6E-38 T 22-04-2016 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 SRM_RS05845 0f4559457055406164d7da54841c743a 190 Gene3D G3DSA:1.10.520.20 4 106 3.3E-19 T 22-04-2016 IPR026015 F1F0 ATP synthase OSCP/delta subunit, N-terminal domain SRM_RS05845 0f4559457055406164d7da54841c743a 190 Pfam PF00213 ATP synthase delta (OSCP) subunit 6 176 1.6E-47 T 22-04-2016 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 SRM_RS03700 a3caad23f9cc388c26b5ee2cd1a7ec13 336 Pfam PF01795 MraW methylase family 23 322 3.9E-89 T 22-04-2016 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 SRM_RS03700 a3caad23f9cc388c26b5ee2cd1a7ec13 336 Gene3D G3DSA:3.40.50.150 24 131 4.5E-43 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SRM_RS03700 a3caad23f9cc388c26b5ee2cd1a7ec13 336 Gene3D G3DSA:3.40.50.150 233 322 4.5E-43 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SRM_RS03700 a3caad23f9cc388c26b5ee2cd1a7ec13 336 Gene3D G3DSA:1.10.150.170 133 232 2.2E-35 T 22-04-2016 IPR023397 S-adenosyl-L-methionine-dependent methyltransferase, MraW, recognition domain GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 SRM_RS03700 a3caad23f9cc388c26b5ee2cd1a7ec13 336 TIGRFAM TIGR00006 TIGR00006: 16S rRNA (cytosine(1402)-N(4))-methyltransferase 22 322 4.8E-86 T 22-04-2016 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 SRM_RS03700 a3caad23f9cc388c26b5ee2cd1a7ec13 336 SUPERFAMILY SSF81799 134 229 6.67E-31 T 22-04-2016 IPR023397 S-adenosyl-L-methionine-dependent methyltransferase, MraW, recognition domain GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 SRM_RS03700 a3caad23f9cc388c26b5ee2cd1a7ec13 336 SUPERFAMILY SSF53335 230 322 2.54E-40 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SRM_RS03700 a3caad23f9cc388c26b5ee2cd1a7ec13 336 SUPERFAMILY SSF53335 23 134 2.54E-40 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SRM_RS03700 a3caad23f9cc388c26b5ee2cd1a7ec13 336 PANTHER PTHR11265 1 325 3.6E-117 T 22-04-2016 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 SRM_RS03700 a3caad23f9cc388c26b5ee2cd1a7ec13 336 PANTHER PTHR11265:SF0 1 325 3.6E-117 T 22-04-2016 SRM_RS03700 a3caad23f9cc388c26b5ee2cd1a7ec13 336 PIRSF PIRSF004486 18 324 4.2E-94 T 22-04-2016 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 SRM_RS03700 a3caad23f9cc388c26b5ee2cd1a7ec13 336 Hamap MF_01007 Ribosomal RNA small subunit methyltransferase H [rsmH]. 24 323 35.765 T 22-04-2016 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 SRM_RS05015 04162d534f0dc33fcba91e20684c3e97 757 SMART SM00387 624 736 4.3E-38 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SRM_RS05015 04162d534f0dc33fcba91e20684c3e97 757 Pfam PF00512 His Kinase A (phospho-acceptor) domain 511 578 2.4E-11 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SRM_RS05015 04162d534f0dc33fcba91e20684c3e97 757 Pfam PF13185 GAF domain 360 490 3.0E-8 T 22-04-2016 IPR003018 GAF domain GO:0005515 SRM_RS05015 04162d534f0dc33fcba91e20684c3e97 757 Gene3D G3DSA:3.30.565.10 584 738 3.6E-43 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SRM_RS05015 04162d534f0dc33fcba91e20684c3e97 757 Pfam PF16927 N-terminal 7TM region of histidine kinase 19 227 2.2E-17 T 22-04-2016 IPR031621 Histidine kinase, N-terminal 7TM region SRM_RS05015 04162d534f0dc33fcba91e20684c3e97 757 Gene3D G3DSA:1.10.287.130 504 574 4.3E-15 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SRM_RS05015 04162d534f0dc33fcba91e20684c3e97 757 PANTHER PTHR24423 327 438 1.9E-77 T 22-04-2016 SRM_RS05015 04162d534f0dc33fcba91e20684c3e97 757 PANTHER PTHR24423 149 155 1.9E-77 T 22-04-2016 SRM_RS05015 04162d534f0dc33fcba91e20684c3e97 757 PANTHER PTHR24423 490 749 1.9E-77 T 22-04-2016 SRM_RS05015 04162d534f0dc33fcba91e20684c3e97 757 SUPERFAMILY SSF47384 496 578 2.35E-17 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SRM_RS05015 04162d534f0dc33fcba91e20684c3e97 757 Gene3D G3DSA:3.30.450.40 334 503 1.5E-12 T 22-04-2016 IPR029016 GAF domain-like SRM_RS05015 04162d534f0dc33fcba91e20684c3e97 757 PRINTS PR00344 Bacterial sensor protein C-terminal signature 696 714 5.5E-17 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SRM_RS05015 04162d534f0dc33fcba91e20684c3e97 757 PRINTS PR00344 Bacterial sensor protein C-terminal signature 720 733 5.5E-17 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SRM_RS05015 04162d534f0dc33fcba91e20684c3e97 757 PRINTS PR00344 Bacterial sensor protein C-terminal signature 661 675 5.5E-17 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SRM_RS05015 04162d534f0dc33fcba91e20684c3e97 757 PRINTS PR00344 Bacterial sensor protein C-terminal signature 679 689 5.5E-17 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SRM_RS05015 04162d534f0dc33fcba91e20684c3e97 757 SUPERFAMILY SSF55874 568 734 8.25E-44 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SRM_RS05015 04162d534f0dc33fcba91e20684c3e97 757 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 625 735 2.3E-25 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SRM_RS05015 04162d534f0dc33fcba91e20684c3e97 757 SUPERFAMILY SSF55781 362 501 9.16E-13 T 22-04-2016 IPR029016 GAF domain-like SRM_RS05015 04162d534f0dc33fcba91e20684c3e97 757 SMART SM00388 511 578 1.1E-14 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SRM_RS06680 3f90d5fc6f5dc4f1455ef16d0af91bb2 439 PANTHER PTHR30480:SF3 17 437 1.8E-103 T 22-04-2016 SRM_RS06680 3f90d5fc6f5dc4f1455ef16d0af91bb2 439 PIRSF PIRSF016719 11 433 3.0E-125 T 22-04-2016 IPR008302 Uncharacterised conserved protein UCP016719 SRM_RS06680 3f90d5fc6f5dc4f1455ef16d0af91bb2 439 Pfam PF07075 Protein of unknown function (DUF1343) 61 432 9.5E-129 T 22-04-2016 IPR008302 Uncharacterised conserved protein UCP016719 SRM_RS06680 3f90d5fc6f5dc4f1455ef16d0af91bb2 439 PANTHER PTHR30480 17 437 1.8E-103 T 22-04-2016 SRM_RS13880 5b228970bfe39e9576ca8298fa2f8f8a 356 SUPERFAMILY SSF101821 72 179 5.49E-27 T 22-04-2016 SRM_RS13880 5b228970bfe39e9576ca8298fa2f8f8a 356 PIRSF PIRSF001123 2 356 6.7E-96 T 22-04-2016 IPR008007 Peptidase M42 SRM_RS13880 5b228970bfe39e9576ca8298fa2f8f8a 356 PANTHER PTHR32481 1 352 2.9E-129 T 22-04-2016 SRM_RS13880 5b228970bfe39e9576ca8298fa2f8f8a 356 PANTHER PTHR32481:SF10 1 352 2.9E-129 T 22-04-2016 SRM_RS13880 5b228970bfe39e9576ca8298fa2f8f8a 356 Gene3D G3DSA:3.40.630.10 168 350 1.6E-72 T 22-04-2016 SRM_RS13880 5b228970bfe39e9576ca8298fa2f8f8a 356 Gene3D G3DSA:3.40.630.10 2 73 1.6E-72 T 22-04-2016 SRM_RS13880 5b228970bfe39e9576ca8298fa2f8f8a 356 SUPERFAMILY SSF53187 4 84 1.81E-61 T 22-04-2016 SRM_RS13880 5b228970bfe39e9576ca8298fa2f8f8a 356 SUPERFAMILY SSF53187 174 345 1.81E-61 T 22-04-2016 SRM_RS13880 5b228970bfe39e9576ca8298fa2f8f8a 356 Pfam PF05343 M42 glutamyl aminopeptidase 47 338 5.3E-85 T 22-04-2016 IPR008007 Peptidase M42 SRM_RS13880 5b228970bfe39e9576ca8298fa2f8f8a 356 Gene3D G3DSA:2.40.30.40 74 162 2.3E-27 T 22-04-2016 IPR023367 Peptidase M42, domain 2 SRM_RS11420 e2a3b8871e9afb11256878f94b042750 328 SUPERFAMILY SSF53335 276 320 4.1E-12 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SRM_RS11420 e2a3b8871e9afb11256878f94b042750 328 SUPERFAMILY SSF53335 47 202 4.1E-12 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SRM_RS11420 e2a3b8871e9afb11256878f94b042750 328 PIRSF PIRSF018005 4 324 4.1E-112 T 22-04-2016 IPR017804 Methyltransferase EgtD-like SRM_RS11420 e2a3b8871e9afb11256878f94b042750 328 PANTHER PTHR30468:SF6 25 318 3.2E-75 T 22-04-2016 SRM_RS11420 e2a3b8871e9afb11256878f94b042750 328 TIGRFAM TIGR03438 egtD_ergothio: dimethylhistidine N-methyltransferase 20 321 1.3E-118 T 22-04-2016 IPR017804 Methyltransferase EgtD-like SRM_RS11420 e2a3b8871e9afb11256878f94b042750 328 PANTHER PTHR30468 25 318 3.2E-75 T 22-04-2016 SRM_RS11420 e2a3b8871e9afb11256878f94b042750 328 Pfam PF10017 Histidine-specific methyltransferase, SAM-dependent 196 318 6.0E-40 T 22-04-2016 IPR019257 Histidine-specific methyltransferase, SAM-dependent SRM_RS11420 e2a3b8871e9afb11256878f94b042750 328 Gene3D G3DSA:3.40.50.150 285 315 1.1E-7 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SRM_RS11420 e2a3b8871e9afb11256878f94b042750 328 Gene3D G3DSA:3.40.50.150 67 219 1.1E-7 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SRM_RS07080 9e7ff5cae176f9a48d56c46912f77aaf 253 PANTHER PTHR26402 13 240 6.5E-78 T 22-04-2016 SRM_RS07080 9e7ff5cae176f9a48d56c46912f77aaf 253 SUPERFAMILY SSF46894 139 239 1.22E-28 T 22-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 SRM_RS07080 9e7ff5cae176f9a48d56c46912f77aaf 253 Pfam PF00486 Transcriptional regulatory protein, C terminal 162 237 6.7E-25 T 22-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 SRM_RS07080 9e7ff5cae176f9a48d56c46912f77aaf 253 SMART SM00862 161 237 6.2E-26 T 22-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 SRM_RS07080 9e7ff5cae176f9a48d56c46912f77aaf 253 Gene3D G3DSA:3.40.50.2300 9 133 3.0E-37 T 22-04-2016 SRM_RS07080 9e7ff5cae176f9a48d56c46912f77aaf 253 Pfam PF00072 Response regulator receiver domain 16 125 8.2E-26 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SRM_RS07080 9e7ff5cae176f9a48d56c46912f77aaf 253 Gene3D G3DSA:1.10.10.10 139 239 8.7E-32 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SRM_RS07080 9e7ff5cae176f9a48d56c46912f77aaf 253 SUPERFAMILY SSF52172 10 134 1.12E-36 T 22-04-2016 IPR011006 CheY-like superfamily SRM_RS07080 9e7ff5cae176f9a48d56c46912f77aaf 253 PANTHER PTHR26402:SF50 13 240 6.5E-78 T 22-04-2016 SRM_RS07080 9e7ff5cae176f9a48d56c46912f77aaf 253 SMART SM00448 13 125 1.2E-39 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SRM_RS06850 6c00065b443b4c27275653d15c619644 379 Pfam PF12544 Lysine-2,3-aminomutase 289 342 3.1E-9 T 22-04-2016 IPR025895 Lysine-2,3-aminomutase, C-terminal domain SRM_RS06850 6c00065b443b4c27275653d15c619644 379 TIGRFAM TIGR00238 TIGR00238: KamA family protein 2 307 1.2E-93 T 22-04-2016 IPR003739 Lysine-2,3-aminomutase/glutamate 2,3-aminomutase SRM_RS06850 6c00065b443b4c27275653d15c619644 379 PANTHER PTHR30538:SF1 1 335 1.5E-129 T 22-04-2016 SRM_RS06850 6c00065b443b4c27275653d15c619644 379 Gene3D G3DSA:3.20.20.70 86 296 3.2E-22 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 SRM_RS06850 6c00065b443b4c27275653d15c619644 379 PIRSF PIRSF004911 1 353 1.3E-148 T 22-04-2016 IPR003739 Lysine-2,3-aminomutase/glutamate 2,3-aminomutase SRM_RS06850 6c00065b443b4c27275653d15c619644 379 SUPERFAMILY SSF102114 86 315 1.02E-33 T 22-04-2016 SRM_RS06850 6c00065b443b4c27275653d15c619644 379 Pfam PF13394 4Fe-4S single cluster domain 96 167 1.1E-5 T 22-04-2016 SRM_RS06850 6c00065b443b4c27275653d15c619644 379 PANTHER PTHR30538 1 335 1.5E-129 T 22-04-2016 SRM_RS06850 6c00065b443b4c27275653d15c619644 379 Pfam PF04055 Radical SAM superfamily 98 246 2.1E-10 T 22-04-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 SRM_RS10540 e120d73c76791703fcf078b67a5cd1e4 174 Pfam PF00583 Acetyltransferase (GNAT) family 64 143 1.9E-13 T 22-04-2016 IPR000182 GNAT domain GO:0008080 SRM_RS10540 e120d73c76791703fcf078b67a5cd1e4 174 SUPERFAMILY SSF55729 6 144 8.02E-27 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase SRM_RS10540 e120d73c76791703fcf078b67a5cd1e4 174 Gene3D G3DSA:3.40.630.30 6 143 9.3E-28 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase SRM_RS10540 e120d73c76791703fcf078b67a5cd1e4 174 PANTHER PTHR23091 6 141 7.6E-18 T 22-04-2016 SRM_RS11295 eae8bc1db4fb4dc837285bd68a0293ec 1081 SUPERFAMILY SSF82693 47 141 5.93E-20 T 22-04-2016 SRM_RS11295 eae8bc1db4fb4dc837285bd68a0293ec 1081 SUPERFAMILY SSF82693 141 187 4.71E-9 T 22-04-2016 SRM_RS11295 eae8bc1db4fb4dc837285bd68a0293ec 1081 Gene3D G3DSA:3.30.70.1430 47 147 9.8E-21 T 22-04-2016 SRM_RS11295 eae8bc1db4fb4dc837285bd68a0293ec 1081 Gene3D G3DSA:1.10.3850.10 846 1074 9.7E-68 T 22-04-2016 SRM_RS11295 eae8bc1db4fb4dc837285bd68a0293ec 1081 PANTHER PTHR32063:SF16 9 891 0.0 T 22-04-2016 SRM_RS11295 eae8bc1db4fb4dc837285bd68a0293ec 1081 PANTHER PTHR32063:SF16 908 1080 0.0 T 22-04-2016 SRM_RS11295 eae8bc1db4fb4dc837285bd68a0293ec 1081 SUPERFAMILY SSF82866 841 1076 9.55E-42 T 22-04-2016 SRM_RS11295 eae8bc1db4fb4dc837285bd68a0293ec 1081 PRINTS PR00702 Acriflavin resistance protein family signature 377 398 1.2E-28 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 SRM_RS11295 eae8bc1db4fb4dc837285bd68a0293ec 1081 PRINTS PR00702 Acriflavin resistance protein family signature 459 482 1.2E-28 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 SRM_RS11295 eae8bc1db4fb4dc837285bd68a0293ec 1081 PRINTS PR00702 Acriflavin resistance protein family signature 45 63 1.2E-28 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 SRM_RS11295 eae8bc1db4fb4dc837285bd68a0293ec 1081 PRINTS PR00702 Acriflavin resistance protein family signature 578 595 1.2E-28 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 SRM_RS11295 eae8bc1db4fb4dc837285bd68a0293ec 1081 PRINTS PR00702 Acriflavin resistance protein family signature 484 507 1.2E-28 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 SRM_RS11295 eae8bc1db4fb4dc837285bd68a0293ec 1081 PRINTS PR00702 Acriflavin resistance protein family signature 405 429 1.2E-28 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 SRM_RS11295 eae8bc1db4fb4dc837285bd68a0293ec 1081 SUPERFAMILY SSF82714 756 839 1.83E-10 T 22-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains SRM_RS11295 eae8bc1db4fb4dc837285bd68a0293ec 1081 Gene3D G3DSA:1.20.1640.10 305 515 4.1E-46 T 22-04-2016 SRM_RS11295 eae8bc1db4fb4dc837285bd68a0293ec 1081 SUPERFAMILY SSF82866 316 510 1.83E-37 T 22-04-2016 SRM_RS11295 eae8bc1db4fb4dc837285bd68a0293ec 1081 Gene3D G3DSA:3.30.70.1430 596 703 1.7E-10 T 22-04-2016 SRM_RS11295 eae8bc1db4fb4dc837285bd68a0293ec 1081 PANTHER PTHR32063 9 891 0.0 T 22-04-2016 SRM_RS11295 eae8bc1db4fb4dc837285bd68a0293ec 1081 PANTHER PTHR32063 908 1080 0.0 T 22-04-2016 SRM_RS11295 eae8bc1db4fb4dc837285bd68a0293ec 1081 SUPERFAMILY SSF82693 591 704 1.88E-11 T 22-04-2016 SRM_RS11295 eae8bc1db4fb4dc837285bd68a0293ec 1081 SUPERFAMILY SSF82714 188 270 5.89E-15 T 22-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains SRM_RS11295 eae8bc1db4fb4dc837285bd68a0293ec 1081 Gene3D G3DSA:3.30.2090.10 188 271 9.1E-16 T 22-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains SRM_RS11295 eae8bc1db4fb4dc837285bd68a0293ec 1081 Gene3D G3DSA:3.30.2090.10 755 840 6.4E-12 T 22-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains SRM_RS11295 eae8bc1db4fb4dc837285bd68a0293ec 1081 SUPERFAMILY SSF82693 288 342 4.71E-9 T 22-04-2016 SRM_RS11295 eae8bc1db4fb4dc837285bd68a0293ec 1081 Pfam PF00873 AcrB/AcrD/AcrF family 12 1072 1.9E-166 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 SRM_RS01300 3d4021b0e820b470c9ff5e41274afca0 1372 SUPERFAMILY SSF63829 79 271 8.07E-12 T 22-04-2016 SRM_RS01300 3d4021b0e820b470c9ff5e41274afca0 1372 Pfam PF12833 Helix-turn-helix domain 1290 1367 2.1E-24 T 22-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 SRM_RS01300 3d4021b0e820b470c9ff5e41274afca0 1372 PANTHER PTHR24423:SF486 810 976 4.5E-122 T 22-04-2016 SRM_RS01300 3d4021b0e820b470c9ff5e41274afca0 1372 PANTHER PTHR24423:SF486 996 1276 4.5E-122 T 22-04-2016 SRM_RS01300 3d4021b0e820b470c9ff5e41274afca0 1372 PANTHER PTHR24423:SF486 403 470 4.5E-122 T 22-04-2016 SRM_RS01300 3d4021b0e820b470c9ff5e41274afca0 1372 PANTHER PTHR24423:SF486 535 576 4.5E-122 T 22-04-2016 SRM_RS01300 3d4021b0e820b470c9ff5e41274afca0 1372 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 946 1069 1.9E-23 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SRM_RS01300 3d4021b0e820b470c9ff5e41274afca0 1372 SUPERFAMILY SSF46689 1320 1369 1.48E-11 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 SRM_RS01300 3d4021b0e820b470c9ff5e41274afca0 1372 Gene3D G3DSA:1.10.10.60 1322 1366 1.6E-16 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 SRM_RS01300 3d4021b0e820b470c9ff5e41274afca0 1372 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 1321 1363 - T 22-04-2016 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 SRM_RS01300 3d4021b0e820b470c9ff5e41274afca0 1372 PRINTS PR00344 Bacterial sensor protein C-terminal signature 1014 1024 1.0E-15 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SRM_RS01300 3d4021b0e820b470c9ff5e41274afca0 1372 PRINTS PR00344 Bacterial sensor protein C-terminal signature 1031 1049 1.0E-15 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SRM_RS01300 3d4021b0e820b470c9ff5e41274afca0 1372 PRINTS PR00344 Bacterial sensor protein C-terminal signature 1055 1068 1.0E-15 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SRM_RS01300 3d4021b0e820b470c9ff5e41274afca0 1372 PRINTS PR00344 Bacterial sensor protein C-terminal signature 996 1010 1.0E-15 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SRM_RS01300 3d4021b0e820b470c9ff5e41274afca0 1372 SUPERFAMILY SSF55874 889 1073 8.38E-44 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SRM_RS01300 3d4021b0e820b470c9ff5e41274afca0 1372 SMART SM00388 831 899 1.3E-11 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SRM_RS01300 3d4021b0e820b470c9ff5e41274afca0 1372 Gene3D G3DSA:1.10.287.130 822 884 4.0E-13 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SRM_RS01300 3d4021b0e820b470c9ff5e41274afca0 1372 Gene3D G3DSA:3.30.565.10 885 1071 1.9E-44 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SRM_RS01300 3d4021b0e820b470c9ff5e41274afca0 1372 Pfam PF00512 His Kinase A (phospho-acceptor) domain 831 899 7.8E-13 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SRM_RS01300 3d4021b0e820b470c9ff5e41274afca0 1372 SUPERFAMILY SSF52172 1116 1249 9.68E-38 T 22-04-2016 IPR011006 CheY-like superfamily SRM_RS01300 3d4021b0e820b470c9ff5e41274afca0 1372 SUPERFAMILY SSF63829 510 652 8.24E-9 T 22-04-2016 SRM_RS01300 3d4021b0e820b470c9ff5e41274afca0 1372 Gene3D G3DSA:2.120.10.30 287 463 3.3E-8 T 22-04-2016 IPR011042 Six-bladed beta-propeller, TolB-like SRM_RS01300 3d4021b0e820b470c9ff5e41274afca0 1372 SMART SM00387 945 1071 2.0E-36 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SRM_RS01300 3d4021b0e820b470c9ff5e41274afca0 1372 PANTHER PTHR24423 810 976 4.5E-122 T 22-04-2016 SRM_RS01300 3d4021b0e820b470c9ff5e41274afca0 1372 PANTHER PTHR24423 996 1276 4.5E-122 T 22-04-2016 SRM_RS01300 3d4021b0e820b470c9ff5e41274afca0 1372 PANTHER PTHR24423 403 470 4.5E-122 T 22-04-2016 SRM_RS01300 3d4021b0e820b470c9ff5e41274afca0 1372 PANTHER PTHR24423 535 576 4.5E-122 T 22-04-2016 SRM_RS01300 3d4021b0e820b470c9ff5e41274afca0 1372 SMART SM00342 1284 1367 2.6E-33 T 22-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 SRM_RS01300 3d4021b0e820b470c9ff5e41274afca0 1372 Pfam PF00072 Response regulator receiver domain 1124 1234 1.2E-26 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SRM_RS01300 3d4021b0e820b470c9ff5e41274afca0 1372 SMART SM00448 1122 1234 1.2E-39 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SRM_RS01300 3d4021b0e820b470c9ff5e41274afca0 1372 SUPERFAMILY SSF47384 819 900 5.3E-16 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SRM_RS01300 3d4021b0e820b470c9ff5e41274afca0 1372 Pfam PF07494 Two component regulator propeller 79 100 0.004 T 22-04-2016 IPR011110 Two component regulator propeller SRM_RS01300 3d4021b0e820b470c9ff5e41274afca0 1372 Pfam PF07494 Two component regulator propeller 523 544 0.0062 T 22-04-2016 IPR011110 Two component regulator propeller SRM_RS01300 3d4021b0e820b470c9ff5e41274afca0 1372 Pfam PF07494 Two component regulator propeller 122 143 1.1E-4 T 22-04-2016 IPR011110 Two component regulator propeller SRM_RS01300 3d4021b0e820b470c9ff5e41274afca0 1372 Gene3D G3DSA:3.40.50.2300 1119 1248 1.4E-39 T 22-04-2016 SRM_RS01300 3d4021b0e820b470c9ff5e41274afca0 1372 Gene3D G3DSA:1.10.10.60 1269 1321 3.9E-11 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 SRM_RS01300 3d4021b0e820b470c9ff5e41274afca0 1372 Gene3D G3DSA:2.120.10.30 83 271 1.9E-9 T 22-04-2016 IPR011042 Six-bladed beta-propeller, TolB-like SRM_RS01300 3d4021b0e820b470c9ff5e41274afca0 1372 Gene3D G3DSA:2.120.10.30 494 586 2.3E-6 T 22-04-2016 IPR011042 Six-bladed beta-propeller, TolB-like SRM_RS12045 540ad18d35ab5d1129987b19ec07154b 916 Pfam PF13607 Succinyl-CoA ligase like flavodoxin domain 179 315 1.5E-56 T 22-04-2016 IPR032875 Succinyl-CoA synthetase-like, flavodoxin domain SRM_RS12045 540ad18d35ab5d1129987b19ec07154b 916 Gene3D G3DSA:3.40.50.720 25 158 2.3E-38 T 22-04-2016 IPR016040 NAD(P)-binding domain SRM_RS12045 540ad18d35ab5d1129987b19ec07154b 916 SUPERFAMILY SSF52210 156 321 1.3E-45 T 22-04-2016 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|UniPathway: UPA00223 SRM_RS12045 540ad18d35ab5d1129987b19ec07154b 916 SUPERFAMILY SSF51735 29 157 1.42E-37 T 22-04-2016 IPR016040 NAD(P)-binding domain SRM_RS12045 540ad18d35ab5d1129987b19ec07154b 916 SUPERFAMILY SSF52210 321 477 4.84E-40 T 22-04-2016 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|UniPathway: UPA00223 SRM_RS12045 540ad18d35ab5d1129987b19ec07154b 916 Gene3D G3DSA:3.40.50.261 313 466 4.4E-20 T 22-04-2016 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|UniPathway: UPA00223 SRM_RS12045 540ad18d35ab5d1129987b19ec07154b 916 PANTHER PTHR11117:SF8 11 729 0.0 T 22-04-2016 SRM_RS12045 540ad18d35ab5d1129987b19ec07154b 916 Gene3D G3DSA:3.40.630.30 752 905 8.1E-25 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase SRM_RS12045 540ad18d35ab5d1129987b19ec07154b 916 Pfam PF13549 ATP-grasp domain 508 724 1.0E-83 T 22-04-2016 SRM_RS12045 540ad18d35ab5d1129987b19ec07154b 916 Gene3D G3DSA:3.40.50.261 159 312 1.7E-37 T 22-04-2016 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|UniPathway: UPA00223 SRM_RS12045 540ad18d35ab5d1129987b19ec07154b 916 SMART SM00881 32 127 1.0E-31 T 22-04-2016 IPR003781 CoA-binding GO:0048037 SRM_RS12045 540ad18d35ab5d1129987b19ec07154b 916 Pfam PF13302 Acetyltransferase (GNAT) domain 758 900 2.4E-15 T 22-04-2016 IPR000182 GNAT domain GO:0008080 SRM_RS12045 540ad18d35ab5d1129987b19ec07154b 916 SUPERFAMILY SSF55729 735 903 1.45E-26 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase SRM_RS12045 540ad18d35ab5d1129987b19ec07154b 916 PANTHER PTHR11117 11 729 0.0 T 22-04-2016 SRM_RS12045 540ad18d35ab5d1129987b19ec07154b 916 SUPERFAMILY SSF56059 515 725 1.27E-43 T 22-04-2016 SRM_RS12045 540ad18d35ab5d1129987b19ec07154b 916 Pfam PF13380 CoA binding domain 36 161 5.3E-23 T 22-04-2016 IPR003781 CoA-binding GO:0048037 SRM_RS12045 540ad18d35ab5d1129987b19ec07154b 916 Gene3D G3DSA:3.30.470.20 517 613 1.0E-9 T 22-04-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 SRM_RS02850 7ffc051f3a359552eb82e40458697bae 620 PANTHER PTHR31616:SF0 7 616 1.6E-162 T 22-04-2016 SRM_RS02850 7ffc051f3a359552eb82e40458697bae 620 PANTHER PTHR31616 7 616 1.6E-162 T 22-04-2016 SRM_RS02850 7ffc051f3a359552eb82e40458697bae 620 Gene3D G3DSA:1.50.10.10 231 608 2.6E-88 T 22-04-2016 IPR012341 Six-hairpin glycosidase GO:0003824 SRM_RS02850 7ffc051f3a359552eb82e40458697bae 620 Pfam PF00723 Glycosyl hydrolases family 15 235 540 2.0E-47 T 22-04-2016 IPR011613 Glycoside hydrolase family 15/Phosphorylase b kinase regulatory chain family Reactome: REACT_474 SRM_RS02850 7ffc051f3a359552eb82e40458697bae 620 SUPERFAMILY SSF48208 208 605 2.52E-105 T 22-04-2016 IPR008928 Six-hairpin glycosidase-like GO:0003824 SRM_RS11135 ded7d8f02064efa577917a8343bbad06 513 Pfam PF03321 GH3 auxin-responsive promoter 18 132 8.5E-27 T 22-04-2016 IPR004993 GH3 family KEGG: 00220+6.3.2.-|KEGG: 00261+6.3.2.-|KEGG: 00380+6.3.2.- SRM_RS11135 ded7d8f02064efa577917a8343bbad06 513 Pfam PF03321 GH3 auxin-responsive promoter 145 499 7.9E-65 T 22-04-2016 IPR004993 GH3 family KEGG: 00220+6.3.2.-|KEGG: 00261+6.3.2.-|KEGG: 00380+6.3.2.- SRM_RS11135 ded7d8f02064efa577917a8343bbad06 513 PANTHER PTHR31901 15 503 5.0E-41 T 22-04-2016 IPR004993 GH3 family KEGG: 00220+6.3.2.-|KEGG: 00261+6.3.2.-|KEGG: 00380+6.3.2.- SRM_RS11135 ded7d8f02064efa577917a8343bbad06 513 PANTHER PTHR31901:SF5 15 503 5.0E-41 T 22-04-2016 SRM_RS11135 ded7d8f02064efa577917a8343bbad06 513 SUPERFAMILY SSF56801 199 453 1.15E-6 T 22-04-2016 SRM_RS13070 1b4a42d5f668f14bcdf2a3e536185f22 350 PANTHER PTHR30011 1 344 4.5E-110 T 22-04-2016 SRM_RS13070 1b4a42d5f668f14bcdf2a3e536185f22 350 SUPERFAMILY SSF51679 3 345 5.63E-91 T 22-04-2016 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 SRM_RS13070 1b4a42d5f668f14bcdf2a3e536185f22 350 Gene3D G3DSA:3.20.20.30 2 345 1.7E-100 T 22-04-2016 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 SRM_RS13070 1b4a42d5f668f14bcdf2a3e536185f22 350 Pfam PF00296 Luciferase-like monooxygenase 5 319 6.0E-78 T 22-04-2016 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 SRM_RS13070 1b4a42d5f668f14bcdf2a3e536185f22 350 PANTHER PTHR30011:SF21 1 344 4.5E-110 T 22-04-2016 SRM_RS08255 56693da6e560ca08083a2b666c4c9fe8 554 PRINTS PR00723 Subtilisin serine protease family (S8) signature 174 193 1.3E-5 T 22-04-2016 IPR015500 Peptidase S8, subtilisin-related SRM_RS08255 56693da6e560ca08083a2b666c4c9fe8 554 PRINTS PR00723 Subtilisin serine protease family (S8) signature 211 224 1.3E-5 T 22-04-2016 IPR015500 Peptidase S8, subtilisin-related SRM_RS08255 56693da6e560ca08083a2b666c4c9fe8 554 PRINTS PR00723 Subtilisin serine protease family (S8) signature 397 413 1.3E-5 T 22-04-2016 IPR015500 Peptidase S8, subtilisin-related SRM_RS08255 56693da6e560ca08083a2b666c4c9fe8 554 ProSitePatterns PS00138 Serine proteases, subtilase family, serine active site. 398 408 - T 22-04-2016 IPR023828 Peptidase S8, subtilisin, Ser-active site SRM_RS08255 56693da6e560ca08083a2b666c4c9fe8 554 Pfam PF00082 Subtilase family 213 446 9.8E-40 T 22-04-2016 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 SRM_RS08255 56693da6e560ca08083a2b666c4c9fe8 554 SUPERFAMILY SSF52743 101 458 1.01E-60 T 22-04-2016 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 SRM_RS08255 56693da6e560ca08083a2b666c4c9fe8 554 SUPERFAMILY SSF52743 54 70 1.01E-60 T 22-04-2016 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 SRM_RS08255 56693da6e560ca08083a2b666c4c9fe8 554 PANTHER PTHR10795:SF419 17 472 1.5E-40 T 22-04-2016 SRM_RS08255 56693da6e560ca08083a2b666c4c9fe8 554 Gene3D G3DSA:3.40.50.200 119 457 5.0E-59 T 22-04-2016 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 SRM_RS08255 56693da6e560ca08083a2b666c4c9fe8 554 PANTHER PTHR10795 17 472 1.5E-40 T 22-04-2016 IPR015500 Peptidase S8, subtilisin-related SRM_RS05455 06564c2c780f88a2c114a23dd2292dc7 454 SUPERFAMILY SSF51905 14 309 3.24E-42 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SRM_RS05455 06564c2c780f88a2c114a23dd2292dc7 454 SUPERFAMILY SSF51905 411 446 3.24E-42 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SRM_RS05455 06564c2c780f88a2c114a23dd2292dc7 454 PANTHER PTHR10742 14 372 1.9E-28 T 22-04-2016 SRM_RS05455 06564c2c780f88a2c114a23dd2292dc7 454 Pfam PF01593 Flavin containing amine oxidoreductase 20 441 1.2E-24 T 22-04-2016 IPR002937 Amine oxidase GO:0016491|GO:0055114 SRM_RS05455 06564c2c780f88a2c114a23dd2292dc7 454 Gene3D G3DSA:3.50.50.60 203 306 2.5E-32 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SRM_RS05455 06564c2c780f88a2c114a23dd2292dc7 454 Gene3D G3DSA:3.50.50.60 14 108 2.5E-32 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SRM_RS13905 78db8a174be90d138f27d8d6043be229 132 TIGRFAM TIGR00004 TIGR00004: reactive intermediate/imine deaminase 10 131 5.8E-50 T 22-04-2016 IPR006056 RidA family SRM_RS13905 78db8a174be90d138f27d8d6043be229 132 Gene3D G3DSA:3.30.1330.40 11 131 3.3E-46 T 22-04-2016 IPR013813 Endoribonuclease L-PSP/chorismate mutase-like SRM_RS13905 78db8a174be90d138f27d8d6043be229 132 SUPERFAMILY SSF55298 10 132 5.81E-42 T 22-04-2016 IPR013813 Endoribonuclease L-PSP/chorismate mutase-like SRM_RS13905 78db8a174be90d138f27d8d6043be229 132 PANTHER PTHR11803 9 132 3.4E-50 T 22-04-2016 IPR006175 YjgF/YER057c/UK114 family SRM_RS13905 78db8a174be90d138f27d8d6043be229 132 Pfam PF01042 Endoribonuclease L-PSP 17 131 2.0E-40 T 22-04-2016 IPR006175 YjgF/YER057c/UK114 family SRM_RS13250 a61b29cc5f84f2608872c8e675315168 469 Gene3D G3DSA:3.40.120.10 273 361 1.9E-23 T 22-04-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 SRM_RS13250 a61b29cc5f84f2608872c8e675315168 469 SUPERFAMILY SSF53738 12 189 6.67E-33 T 22-04-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 SRM_RS13250 a61b29cc5f84f2608872c8e675315168 469 Gene3D G3DSA:3.30.310.50 381 462 2.3E-20 T 22-04-2016 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 SRM_RS13250 a61b29cc5f84f2608872c8e675315168 469 PANTHER PTHR22573 1 469 2.4E-129 T 22-04-2016 SRM_RS13250 a61b29cc5f84f2608872c8e675315168 469 Gene3D G3DSA:3.40.120.10 10 153 1.8E-32 T 22-04-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 SRM_RS13250 a61b29cc5f84f2608872c8e675315168 469 SUPERFAMILY SSF53738 273 377 1.45E-24 T 22-04-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 SRM_RS13250 a61b29cc5f84f2608872c8e675315168 469 Pfam PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II 173 267 1.5E-21 T 22-04-2016 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II GO:0005975 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 SRM_RS13250 a61b29cc5f84f2608872c8e675315168 469 TIGRFAM TIGR03990 Arch_GlmM: phosphoglucosamine mutase 8 456 1.8E-153 T 22-04-2016 IPR024086 Phosphoglucosamine mutase, archaeal type GO:0008966 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 SRM_RS13250 a61b29cc5f84f2608872c8e675315168 469 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 183 202 7.9E-12 T 22-04-2016 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 SRM_RS13250 a61b29cc5f84f2608872c8e675315168 469 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 101 115 7.9E-12 T 22-04-2016 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 SRM_RS13250 a61b29cc5f84f2608872c8e675315168 469 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 247 262 7.9E-12 T 22-04-2016 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 SRM_RS13250 a61b29cc5f84f2608872c8e675315168 469 SUPERFAMILY SSF55957 369 464 1.03E-20 T 22-04-2016 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 SRM_RS13250 a61b29cc5f84f2608872c8e675315168 469 Pfam PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I 12 143 3.9E-30 T 22-04-2016 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 SRM_RS13250 a61b29cc5f84f2608872c8e675315168 469 SUPERFAMILY SSF53738 164 269 7.46E-21 T 22-04-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 SRM_RS13250 a61b29cc5f84f2608872c8e675315168 469 ProSitePatterns PS00710 Phosphoglucomutase and phosphomannomutase phosphoserine signature. 102 111 - T 22-04-2016 IPR016066 Alpha-D-phosphohexomutase, conserved site GO:0000287 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 SRM_RS13250 a61b29cc5f84f2608872c8e675315168 469 Pfam PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III 277 378 5.6E-20 T 22-04-2016 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 SRM_RS13250 a61b29cc5f84f2608872c8e675315168 469 Pfam PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain 397 459 1.4E-11 T 22-04-2016 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 SRM_RS13250 a61b29cc5f84f2608872c8e675315168 469 Gene3D G3DSA:3.40.120.10 184 267 2.4E-21 T 22-04-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 SRM_RS13250 a61b29cc5f84f2608872c8e675315168 469 PANTHER PTHR22573:SF48 1 469 2.4E-129 T 22-04-2016 SRM_RS04375 59b42551f9c254735807bcda142a0930 99 PANTHER PTHR34849 1 89 1.5E-28 T 22-04-2016 SRM_RS04375 59b42551f9c254735807bcda142a0930 99 Pfam PF04255 Protein of unknown function (DUF433) 7 62 4.6E-21 T 22-04-2016 IPR007367 Protein of unknown function DUF433 SRM_RS04375 59b42551f9c254735807bcda142a0930 99 SUPERFAMILY SSF46689 2 75 3.05E-21 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 SRM_RS04375 59b42551f9c254735807bcda142a0930 99 Gene3D G3DSA:1.10.10.10 6 76 4.1E-26 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SRM_RS04375 59b42551f9c254735807bcda142a0930 99 PANTHER PTHR34849:SF1 1 89 1.5E-28 T 22-04-2016 SRM_RS02890 3399a92e2def7cf024c30924f19c83a0 234 PANTHER PTHR10884:SF6 42 192 2.7E-43 T 22-04-2016 SRM_RS02890 3399a92e2def7cf024c30924f19c83a0 234 ProDom PD001581 OXIDOREDUCTASE SUBUNIT NADH DEHYDROGENASE CHAIN C NAD DEHYDROGENASE UBIQUINONE F420H2 119 178 5.0E-19 T 22-04-2016 IPR001268 NADH:ubiquinone oxidoreductase, 30kDa subunit GO:0008137|GO:0055114 SRM_RS02890 3399a92e2def7cf024c30924f19c83a0 234 Hamap MF_01357 NAD(P)H-quinone oxidoreductase subunit J, chloroplastic [ndhJ]. 48 199 25.765 T 22-04-2016 IPR010218 NADH dehydrogenase, subunit C GO:0016651|GO:0055114 SRM_RS02890 3399a92e2def7cf024c30924f19c83a0 234 ProSitePatterns PS00542 Respiratory chain NADH dehydrogenase 30 Kd subunit signature. 152 173 - T 22-04-2016 IPR020396 NADH:ubiquinone oxidoreductase, 30kDa subunit, conserved site GO:0016651|GO:0055114 SRM_RS02890 3399a92e2def7cf024c30924f19c83a0 234 SUPERFAMILY SSF143243 48 193 3.79E-50 T 22-04-2016 SRM_RS02890 3399a92e2def7cf024c30924f19c83a0 234 PANTHER PTHR10884 42 192 2.7E-43 T 22-04-2016 SRM_RS02890 3399a92e2def7cf024c30924f19c83a0 234 Pfam PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit 72 189 3.0E-41 T 22-04-2016 IPR001268 NADH:ubiquinone oxidoreductase, 30kDa subunit GO:0008137|GO:0055114 SRM_RS02890 3399a92e2def7cf024c30924f19c83a0 234 TIGRFAM TIGR01961 NuoC_fam: NADH (or F420H2) dehydrogenase, subunit C 72 188 3.1E-39 T 22-04-2016 IPR010218 NADH dehydrogenase, subunit C GO:0016651|GO:0055114 SRM_RS07100 e542efe005ec533c65b786e820988758 216 Gene3D G3DSA:2.10.109.10 79 200 3.4E-25 T 22-04-2016 IPR028360 Peptidase S24/S26, beta-ribbon domain SRM_RS07100 e542efe005ec533c65b786e820988758 216 TIGRFAM TIGR00498 lexA: repressor LexA 4 199 3.6E-33 T 22-04-2016 IPR006200 Transcription regulator LexA GO:0004252|GO:0009432|GO:0045892 SRM_RS07100 e542efe005ec533c65b786e820988758 216 Pfam PF00717 Peptidase S24-like 117 182 4.7E-5 T 22-04-2016 IPR019759 Peptidase S24/S26A/S26B SRM_RS07100 e542efe005ec533c65b786e820988758 216 SUPERFAMILY SSF51306 78 200 1.41E-25 T 22-04-2016 IPR015927 Peptidase S24/S26A/S26B/S26C SRM_RS07100 e542efe005ec533c65b786e820988758 216 PANTHER PTHR33516 3 204 4.3E-40 T 22-04-2016 SRM_RS07100 e542efe005ec533c65b786e820988758 216 Gene3D G3DSA:1.10.10.10 4 62 9.2E-19 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SRM_RS07100 e542efe005ec533c65b786e820988758 216 PANTHER PTHR33516:SF2 3 204 4.3E-40 T 22-04-2016 SRM_RS07100 e542efe005ec533c65b786e820988758 216 PRINTS PR00726 Repressor LexA serine protease (S24) family signature 114 124 4.7E-5 T 22-04-2016 IPR006197 Peptidase S24, LexA-like GO:0003677|GO:0006355 SRM_RS07100 e542efe005ec533c65b786e820988758 216 PRINTS PR00726 Repressor LexA serine protease (S24) family signature 152 164 4.7E-5 T 22-04-2016 IPR006197 Peptidase S24, LexA-like GO:0003677|GO:0006355 SRM_RS07100 e542efe005ec533c65b786e820988758 216 PRINTS PR00726 Repressor LexA serine protease (S24) family signature 125 136 4.7E-5 T 22-04-2016 IPR006197 Peptidase S24, LexA-like GO:0003677|GO:0006355 SRM_RS07100 e542efe005ec533c65b786e820988758 216 SUPERFAMILY SSF46785 5 63 3.45E-16 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SRM_RS07100 e542efe005ec533c65b786e820988758 216 Pfam PF01726 LexA DNA binding domain 4 62 4.6E-15 T 22-04-2016 IPR006199 LexA repressor, DNA-binding domain GO:0004252|GO:0006508 SRM_RS09040 4367dff888944a399db2a7c3d0de27d0 712 SUPERFAMILY SSF47323 403 625 7.29E-38 T 22-04-2016 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 SRM_RS09040 4367dff888944a399db2a7c3d0de27d0 712 Hamap MF_00098 Methionine--tRNA ligase [metG]. 8 583 40.194 T 22-04-2016 IPR023458 Methionine-tRNA ligase, type 1 GO:0004825 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 SRM_RS09040 4367dff888944a399db2a7c3d0de27d0 712 Pfam PF01588 Putative tRNA binding domain 619 698 4.1E-21 T 22-04-2016 IPR002547 tRNA-binding domain GO:0000049 Reactome: REACT_71 SRM_RS09040 4367dff888944a399db2a7c3d0de27d0 712 Gene3D G3DSA:2.20.28.20 148 179 1.2E-17 T 22-04-2016 IPR029038 Methionyl-tRNA synthetase, Zn-domain KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 SRM_RS09040 4367dff888944a399db2a7c3d0de27d0 712 TIGRFAM TIGR00398 metG: methionine--tRNA ligase 11 529 2.8E-157 T 22-04-2016 IPR014758 Methionyl-tRNA synthetase GO:0000166|GO:0004825|GO:0005524|GO:0005737|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10|Reactome: REACT_71 SRM_RS09040 4367dff888944a399db2a7c3d0de27d0 712 SUPERFAMILY SSF57770 145 179 7.06E-12 T 22-04-2016 IPR029038 Methionyl-tRNA synthetase, Zn-domain KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 SRM_RS09040 4367dff888944a399db2a7c3d0de27d0 712 PRINTS PR01041 Methionyl-tRNA synthetase signature 12 25 4.6E-28 T 22-04-2016 IPR014758 Methionyl-tRNA synthetase GO:0000166|GO:0004825|GO:0005524|GO:0005737|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10|Reactome: REACT_71 SRM_RS09040 4367dff888944a399db2a7c3d0de27d0 712 PRINTS PR01041 Methionyl-tRNA synthetase signature 45 59 4.6E-28 T 22-04-2016 IPR014758 Methionyl-tRNA synthetase GO:0000166|GO:0004825|GO:0005524|GO:0005737|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10|Reactome: REACT_71 SRM_RS09040 4367dff888944a399db2a7c3d0de27d0 712 PRINTS PR01041 Methionyl-tRNA synthetase signature 303 318 4.6E-28 T 22-04-2016 IPR014758 Methionyl-tRNA synthetase GO:0000166|GO:0004825|GO:0005524|GO:0005737|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10|Reactome: REACT_71 SRM_RS09040 4367dff888944a399db2a7c3d0de27d0 712 PRINTS PR01041 Methionyl-tRNA synthetase signature 401 412 4.6E-28 T 22-04-2016 IPR014758 Methionyl-tRNA synthetase GO:0000166|GO:0004825|GO:0005524|GO:0005737|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10|Reactome: REACT_71 SRM_RS09040 4367dff888944a399db2a7c3d0de27d0 712 PRINTS PR01041 Methionyl-tRNA synthetase signature 93 104 4.6E-28 T 22-04-2016 IPR014758 Methionyl-tRNA synthetase GO:0000166|GO:0004825|GO:0005524|GO:0005737|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10|Reactome: REACT_71 SRM_RS09040 4367dff888944a399db2a7c3d0de27d0 712 PRINTS PR01041 Methionyl-tRNA synthetase signature 263 274 4.6E-28 T 22-04-2016 IPR014758 Methionyl-tRNA synthetase GO:0000166|GO:0004825|GO:0005524|GO:0005737|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10|Reactome: REACT_71 SRM_RS09040 4367dff888944a399db2a7c3d0de27d0 712 SUPERFAMILY SSF52374 9 144 5.63E-97 T 22-04-2016 SRM_RS09040 4367dff888944a399db2a7c3d0de27d0 712 SUPERFAMILY SSF52374 179 400 5.63E-97 T 22-04-2016 SRM_RS09040 4367dff888944a399db2a7c3d0de27d0 712 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 17 28 - T 22-04-2016 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 SRM_RS09040 4367dff888944a399db2a7c3d0de27d0 712 PANTHER PTHR11946:SF72 7 669 2.3E-242 T 22-04-2016 SRM_RS09040 4367dff888944a399db2a7c3d0de27d0 712 Gene3D G3DSA:2.40.50.140 606 710 2.0E-32 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold SRM_RS09040 4367dff888944a399db2a7c3d0de27d0 712 Gene3D G3DSA:3.40.50.620 9 147 1.8E-88 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold SRM_RS09040 4367dff888944a399db2a7c3d0de27d0 712 Gene3D G3DSA:3.40.50.620 186 396 1.8E-88 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold SRM_RS09040 4367dff888944a399db2a7c3d0de27d0 712 SUPERFAMILY SSF50249 608 700 3.43E-25 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold SRM_RS09040 4367dff888944a399db2a7c3d0de27d0 712 Gene3D G3DSA:1.10.730.10 397 572 6.3E-45 T 22-04-2016 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 SRM_RS09040 4367dff888944a399db2a7c3d0de27d0 712 PANTHER PTHR11946 7 669 2.3E-242 T 22-04-2016 SRM_RS09040 4367dff888944a399db2a7c3d0de27d0 712 Pfam PF09334 tRNA synthetases class I (M) 11 414 3.5E-154 T 22-04-2016 IPR015413 Methionyl/Leucyl tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 SRM_RS07125 5c5c07e254b877983bb36daf104a54c9 1043 SUPERFAMILY SSF82693 266 321 7.32E-13 T 22-04-2016 SRM_RS07125 5c5c07e254b877983bb36daf104a54c9 1043 SUPERFAMILY SSF82693 142 180 7.32E-13 T 22-04-2016 SRM_RS07125 5c5c07e254b877983bb36daf104a54c9 1043 SUPERFAMILY SSF82714 710 796 1.06E-16 T 22-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains SRM_RS07125 5c5c07e254b877983bb36daf104a54c9 1043 Gene3D G3DSA:3.30.70.1430 40 138 3.0E-27 T 22-04-2016 SRM_RS07125 5c5c07e254b877983bb36daf104a54c9 1043 PANTHER PTHR32063 1 1026 0.0 T 22-04-2016 SRM_RS07125 5c5c07e254b877983bb36daf104a54c9 1043 SUPERFAMILY SSF82693 40 134 1.4E-24 T 22-04-2016 SRM_RS07125 5c5c07e254b877983bb36daf104a54c9 1043 SUPERFAMILY SSF82714 181 265 1.31E-17 T 22-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains SRM_RS07125 5c5c07e254b877983bb36daf104a54c9 1043 SUPERFAMILY SSF82866 288 487 2.49E-43 T 22-04-2016 SRM_RS07125 5c5c07e254b877983bb36daf104a54c9 1043 Gene3D G3DSA:1.10.3850.10 801 1016 9.6E-62 T 22-04-2016 SRM_RS07125 5c5c07e254b877983bb36daf104a54c9 1043 SUPERFAMILY SSF82866 795 1015 2.62E-51 T 22-04-2016 SRM_RS07125 5c5c07e254b877983bb36daf104a54c9 1043 Gene3D G3DSA:3.30.70.1320 268 295 2.8E-10 T 22-04-2016 SRM_RS07125 5c5c07e254b877983bb36daf104a54c9 1043 Gene3D G3DSA:3.30.70.1320 141 177 2.8E-10 T 22-04-2016 SRM_RS07125 5c5c07e254b877983bb36daf104a54c9 1043 Gene3D G3DSA:1.20.1640.10 296 488 2.8E-55 T 22-04-2016 SRM_RS07125 5c5c07e254b877983bb36daf104a54c9 1043 Pfam PF00873 AcrB/AcrD/AcrF family 4 1016 8.0E-262 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 SRM_RS07125 5c5c07e254b877983bb36daf104a54c9 1043 Gene3D G3DSA:3.30.2090.10 181 264 9.0E-19 T 22-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains SRM_RS07125 5c5c07e254b877983bb36daf104a54c9 1043 Gene3D G3DSA:3.30.2090.10 710 795 2.1E-17 T 22-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains SRM_RS07125 5c5c07e254b877983bb36daf104a54c9 1043 PANTHER PTHR32063:SF0 1 1026 0.0 T 22-04-2016 SRM_RS07125 5c5c07e254b877983bb36daf104a54c9 1043 PRINTS PR00702 Acriflavin resistance protein family signature 10 34 7.9E-49 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 SRM_RS07125 5c5c07e254b877983bb36daf104a54c9 1043 PRINTS PR00702 Acriflavin resistance protein family signature 327 350 7.9E-49 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 SRM_RS07125 5c5c07e254b877983bb36daf104a54c9 1043 PRINTS PR00702 Acriflavin resistance protein family signature 38 56 7.9E-49 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 SRM_RS07125 5c5c07e254b877983bb36daf104a54c9 1043 PRINTS PR00702 Acriflavin resistance protein family signature 382 406 7.9E-49 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 SRM_RS07125 5c5c07e254b877983bb36daf104a54c9 1043 PRINTS PR00702 Acriflavin resistance protein family signature 436 459 7.9E-49 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 SRM_RS07125 5c5c07e254b877983bb36daf104a54c9 1043 PRINTS PR00702 Acriflavin resistance protein family signature 461 484 7.9E-49 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 SRM_RS07125 5c5c07e254b877983bb36daf104a54c9 1043 PRINTS PR00702 Acriflavin resistance protein family signature 354 375 7.9E-49 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 SRM_RS01840 6f174ecb22fbfcb4601600123aacdcd4 822 Pfam PF13807 G-rich domain on putative tyrosine kinase 462 537 1.5E-7 T 22-04-2016 IPR032807 Tyrosine kinase, G-rich domain SRM_RS01840 6f174ecb22fbfcb4601600123aacdcd4 822 SUPERFAMILY SSF52540 621 799 4.59E-32 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SRM_RS01840 6f174ecb22fbfcb4601600123aacdcd4 822 Gene3D G3DSA:3.40.50.300 620 799 3.2E-30 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SRM_RS01840 6f174ecb22fbfcb4601600123aacdcd4 822 PANTHER PTHR32309 582 812 6.8E-111 T 22-04-2016 SRM_RS01840 6f174ecb22fbfcb4601600123aacdcd4 822 PANTHER PTHR32309 421 566 6.8E-111 T 22-04-2016 SRM_RS01840 6f174ecb22fbfcb4601600123aacdcd4 822 PANTHER PTHR32309 42 152 6.8E-111 T 22-04-2016 SRM_RS01840 6f174ecb22fbfcb4601600123aacdcd4 822 PANTHER PTHR32309 170 398 6.8E-111 T 22-04-2016 SRM_RS01840 6f174ecb22fbfcb4601600123aacdcd4 822 Pfam PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain 621 792 3.2E-12 T 22-04-2016 IPR002586 CobQ/CobB/MinD/ParA nucleotide binding domain SRM_RS01840 6f174ecb22fbfcb4601600123aacdcd4 822 PANTHER PTHR32309:SF13 582 812 6.8E-111 T 22-04-2016 SRM_RS01840 6f174ecb22fbfcb4601600123aacdcd4 822 PANTHER PTHR32309:SF13 421 566 6.8E-111 T 22-04-2016 SRM_RS01840 6f174ecb22fbfcb4601600123aacdcd4 822 PANTHER PTHR32309:SF13 42 152 6.8E-111 T 22-04-2016 SRM_RS01840 6f174ecb22fbfcb4601600123aacdcd4 822 PANTHER PTHR32309:SF13 170 398 6.8E-111 T 22-04-2016 SRM_RS01840 6f174ecb22fbfcb4601600123aacdcd4 822 TIGRFAM TIGR01007 eps_fam: capsular exopolysaccharide family 600 800 6.9E-39 T 22-04-2016 IPR005702 Exopolysaccharide synthesis protein GO:0045226 SRM_RS01840 6f174ecb22fbfcb4601600123aacdcd4 822 Pfam PF02706 Chain length determinant protein 43 235 8.7E-14 T 22-04-2016 IPR003856 Lipopolysaccharide biosynthesis GO:0009103|GO:0016020 SRM_RS08210 8177568ef20c936f2202707c9269e833 165 Pfam PF02643 Uncharacterized ACR, COG1430 57 161 2.1E-26 T 22-04-2016 IPR003795 Protein of unknown function DUF192 SRM_RS08210 8177568ef20c936f2202707c9269e833 165 PANTHER PTHR37953 3 161 1.9E-24 T 22-04-2016 SRM_RS08210 8177568ef20c936f2202707c9269e833 165 PANTHER PTHR37953:SF1 3 161 1.9E-24 T 22-04-2016 SRM_RS10900 6b46495ca88a6b0fbe61cff344f9d04e 260 SUPERFAMILY SSF51351 2 252 7.72E-88 T 22-04-2016 IPR000652 Triosephosphate isomerase GO:0004807|GO:0008152 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|UniPathway: UPA00109|UniPathway: UPA00138 SRM_RS10900 6b46495ca88a6b0fbe61cff344f9d04e 260 Hamap MF_00147_B Triosephosphate isomerase [tpiA]. 1 251 37.847 T 22-04-2016 IPR022896 Triosephosphate isomerase, bacterial/eukaryotic GO:0004807|GO:0006096 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|UniPathway: UPA00109|UniPathway: UPA00138 SRM_RS10900 6b46495ca88a6b0fbe61cff344f9d04e 260 Pfam PF00121 Triosephosphate isomerase 2 247 4.7E-85 T 22-04-2016 IPR000652 Triosephosphate isomerase GO:0004807|GO:0008152 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|UniPathway: UPA00109|UniPathway: UPA00138 SRM_RS10900 6b46495ca88a6b0fbe61cff344f9d04e 260 TIGRFAM TIGR00419 tim: triose-phosphate isomerase 2 242 2.4E-56 T 22-04-2016 IPR000652 Triosephosphate isomerase GO:0004807|GO:0008152 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|UniPathway: UPA00109|UniPathway: UPA00138 SRM_RS10900 6b46495ca88a6b0fbe61cff344f9d04e 260 Gene3D G3DSA:3.20.20.70 2 254 2.4E-97 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 SRM_RS10900 6b46495ca88a6b0fbe61cff344f9d04e 260 ProSitePatterns PS00171 Triosephosphate isomerase active site. 166 176 - T 22-04-2016 IPR020861 Triosephosphate isomerase, active site GO:0004807 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|UniPathway: UPA00109|UniPathway: UPA00138 SRM_RS10900 6b46495ca88a6b0fbe61cff344f9d04e 260 PANTHER PTHR21139 1 247 2.0E-104 T 22-04-2016 IPR000652 Triosephosphate isomerase GO:0004807|GO:0008152 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|UniPathway: UPA00109|UniPathway: UPA00138 SRM_RS06205 88bbb0509261fc1001808978629a8fc1 275 TIGRFAM TIGR00544 lgt: prolipoprotein diacylglyceryl transferase 9 262 3.7E-47 T 22-04-2016 IPR001640 Prolipoprotein diacylglyceryl transferase GO:0009249|GO:0016020|GO:0016757|GO:0042158 UniPathway: UPA00664 SRM_RS06205 88bbb0509261fc1001808978629a8fc1 275 Pfam PF01790 Prolipoprotein diacylglyceryl transferase 11 262 5.8E-73 T 22-04-2016 IPR001640 Prolipoprotein diacylglyceryl transferase GO:0009249|GO:0016020|GO:0016757|GO:0042158 UniPathway: UPA00664 SRM_RS06205 88bbb0509261fc1001808978629a8fc1 275 Hamap MF_01147 Prolipoprotein diacylglyceryl transferase [lgt]. 8 269 16.407 T 22-04-2016 IPR001640 Prolipoprotein diacylglyceryl transferase GO:0009249|GO:0016020|GO:0016757|GO:0042158 UniPathway: UPA00664 SRM_RS06205 88bbb0509261fc1001808978629a8fc1 275 ProSitePatterns PS01311 Prolipoprotein diacylglyceryl transferase signature. 139 151 - T 22-04-2016 IPR001640 Prolipoprotein diacylglyceryl transferase GO:0009249|GO:0016020|GO:0016757|GO:0042158 UniPathway: UPA00664 SRM_RS12970 2e890b69c216d179a16e9877f0ba8421 533 Pfam PF16657 Maltogenic Amylase, C-terminal domain 455 525 5.4E-8 T 22-04-2016 IPR032091 Maltogenic Amylase, C-terminal SRM_RS12970 2e890b69c216d179a16e9877f0ba8421 533 Gene3D G3DSA:3.20.20.80 101 446 1.9E-78 T 22-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 SRM_RS12970 2e890b69c216d179a16e9877f0ba8421 533 Pfam PF00128 Alpha amylase, catalytic domain 246 418 3.9E-15 T 22-04-2016 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 SRM_RS12970 2e890b69c216d179a16e9877f0ba8421 533 Pfam PF00128 Alpha amylase, catalytic domain 129 224 3.0E-25 T 22-04-2016 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 SRM_RS12970 2e890b69c216d179a16e9877f0ba8421 533 SMART SM00642 119 444 5.5E-27 T 22-04-2016 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 SRM_RS12970 2e890b69c216d179a16e9877f0ba8421 533 Gene3D G3DSA:2.60.40.1180 459 528 1.0E-12 T 22-04-2016 IPR013780 Glycosyl hydrolase, all-beta SRM_RS12970 2e890b69c216d179a16e9877f0ba8421 533 PANTHER PTHR10357 108 497 8.7E-72 T 22-04-2016 IPR015902 Glycoside hydrolase, family 13 GO:0003824 SRM_RS12970 2e890b69c216d179a16e9877f0ba8421 533 SUPERFAMILY SSF51011 459 528 9.26E-11 T 22-04-2016 SRM_RS12970 2e890b69c216d179a16e9877f0ba8421 533 SUPERFAMILY SSF51445 105 455 3.19E-88 T 22-04-2016 IPR017853 Glycoside hydrolase superfamily SRM_RS14970 e650b49fd35d1400143a8c2b69043f49 462 Pfam PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain 1 190 1.5E-60 T 22-04-2016 IPR001732 UDP-glucose/GDP-mannose dehydrogenase, N-terminal GO:0016616|GO:0051287|GO:0055114 SRM_RS14970 e650b49fd35d1400143a8c2b69043f49 462 Gene3D G3DSA:3.40.50.720 238 444 8.4E-73 T 22-04-2016 IPR016040 NAD(P)-binding domain SRM_RS14970 e650b49fd35d1400143a8c2b69043f49 462 Pfam PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain 207 299 6.1E-39 T 22-04-2016 IPR014026 UDP-glucose/GDP-mannose dehydrogenase, dimerisation GO:0016616|GO:0051287|GO:0055114 SRM_RS14970 e650b49fd35d1400143a8c2b69043f49 462 Gene3D G3DSA:1.20.5.100 211 237 2.2E-19 T 22-04-2016 SRM_RS14970 e650b49fd35d1400143a8c2b69043f49 462 PANTHER PTHR11374:SF18 1 445 4.6E-236 T 22-04-2016 SRM_RS14970 e650b49fd35d1400143a8c2b69043f49 462 Gene3D G3DSA:3.40.50.720 1 210 5.8E-76 T 22-04-2016 IPR016040 NAD(P)-binding domain SRM_RS14970 e650b49fd35d1400143a8c2b69043f49 462 TIGRFAM TIGR03026 NDP-sugDHase: nucleotide sugar dehydrogenase 1 421 8.5E-134 T 22-04-2016 IPR017476 UDP-glucose/GDP-mannose dehydrogenase GO:0016616|GO:0055114 SRM_RS14970 e650b49fd35d1400143a8c2b69043f49 462 SUPERFAMILY SSF48179 207 304 8.33E-32 T 22-04-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 SRM_RS14970 e650b49fd35d1400143a8c2b69043f49 462 SUPERFAMILY SSF51735 1 197 2.09E-54 T 22-04-2016 IPR016040 NAD(P)-binding domain SRM_RS14970 e650b49fd35d1400143a8c2b69043f49 462 PANTHER PTHR11374 1 445 4.6E-236 T 22-04-2016 IPR017476 UDP-glucose/GDP-mannose dehydrogenase GO:0016616|GO:0055114 SRM_RS14970 e650b49fd35d1400143a8c2b69043f49 462 Pfam PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain 323 425 8.8E-28 T 22-04-2016 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 SRM_RS14970 e650b49fd35d1400143a8c2b69043f49 462 PIRSF PIRSF000124 1 440 1.7E-147 T 22-04-2016 IPR017476 UDP-glucose/GDP-mannose dehydrogenase GO:0016616|GO:0055114 SRM_RS14970 e650b49fd35d1400143a8c2b69043f49 462 SUPERFAMILY SSF52413 313 435 9.42E-35 T 22-04-2016 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 SRM_RS14970 e650b49fd35d1400143a8c2b69043f49 462 PIRSF PIRSF500134 1 443 2.4E-183 T 22-04-2016 IPR028357 UDP-glucose 6-dehydrogenase, bacterial type GO:0000271|GO:0003979 KEGG: 00040+1.1.1.22|KEGG: 00053+1.1.1.22|KEGG: 00500+1.1.1.22|KEGG: 00520+1.1.1.22|MetaCyc: PWY-7346|UniPathway: UPA00038 SRM_RS14970 e650b49fd35d1400143a8c2b69043f49 462 SMART SM00984 323 425 1.5E-44 T 22-04-2016 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 SRM_RS11375 97022595443296ba129ea5777f1718bc 114 Pfam PF12643 MazG-like family 41 113 1.4E-13 T 22-04-2016 IPR025984 MazG-like domain KEGG: 00240+3.6.1.12 SRM_RS11375 97022595443296ba129ea5777f1718bc 114 PIRSF PIRSF029826 3 114 7.9E-33 T 22-04-2016 IPR011394 NTP Pyrophosphohydrolase MazG-related, RS21-C6 SRM_RS11375 97022595443296ba129ea5777f1718bc 114 Gene3D G3DSA:1.10.287.1080 5 104 7.2E-18 T 22-04-2016 SRM_RS11375 97022595443296ba129ea5777f1718bc 114 PANTHER PTHR14552 1 112 3.0E-24 T 22-04-2016 SRM_RS11375 97022595443296ba129ea5777f1718bc 114 SUPERFAMILY SSF101386 7 111 4.91E-25 T 22-04-2016 SRM_RS04280 5e0677105f90220dada0a089a3b31eb6 230 PANTHER PTHR35400 14 200 2.8E-14 T 22-04-2016 SRM_RS04280 5e0677105f90220dada0a089a3b31eb6 230 PANTHER PTHR35400:SF1 14 200 2.8E-14 T 22-04-2016 SRM_RS04280 5e0677105f90220dada0a089a3b31eb6 230 Gene3D G3DSA:3.90.1570.10 12 195 2.9E-22 T 22-04-2016 IPR012296 Nuclease, putative, TT1808 SRM_RS04280 5e0677105f90220dada0a089a3b31eb6 230 Pfam PF05685 Putative restriction endonuclease 22 192 1.7E-29 T 22-04-2016 IPR008538 Domain of unknown function DUF820 SRM_RS04280 5e0677105f90220dada0a089a3b31eb6 230 SUPERFAMILY SSF52980 12 195 8.58E-31 T 22-04-2016 IPR011335 Restriction endonuclease type II-like SRM_RS14775 02a062f586c1f41fd29760727d6ef8e6 257 PANTHER PTHR12532 1 242 9.5E-83 T 22-04-2016 IPR002876 Transcriptional regulator TACO1-like SRM_RS14775 02a062f586c1f41fd29760727d6ef8e6 257 SUPERFAMILY SSF75625 6 241 6.28E-72 T 22-04-2016 IPR029072 YebC-like SRM_RS14775 02a062f586c1f41fd29760727d6ef8e6 257 TIGRFAM TIGR01033 TIGR01033: DNA-binding regulatory protein, YebC/PmpR family 1 238 3.6E-72 T 22-04-2016 IPR002876 Transcriptional regulator TACO1-like SRM_RS14775 02a062f586c1f41fd29760727d6ef8e6 257 Gene3D G3DSA:1.10.10.200 1 80 1.7E-27 T 22-04-2016 IPR017856 Integrase, N-terminal zinc-binding domain-like SRM_RS14775 02a062f586c1f41fd29760727d6ef8e6 257 Pfam PF01709 Transcriptional regulator 7 237 1.1E-73 T 22-04-2016 IPR002876 Transcriptional regulator TACO1-like SRM_RS14775 02a062f586c1f41fd29760727d6ef8e6 257 Hamap MF_00693 Probable transcriptional regulatory protein YebC [yebC]. 4 240 28.048 T 22-04-2016 IPR002876 Transcriptional regulator TACO1-like SRM_RS14775 02a062f586c1f41fd29760727d6ef8e6 257 Gene3D G3DSA:3.30.70.980 136 205 2.4E-17 T 22-04-2016 IPR026564 Transcriptional regulator TACO1-like, domain 3 SRM_RS14775 02a062f586c1f41fd29760727d6ef8e6 257 Gene3D G3DSA:3.30.1270.10 213 241 5.6E-28 T 22-04-2016 IPR026563 Transcriptional regulator TACO1-like, domain 2 SRM_RS14775 02a062f586c1f41fd29760727d6ef8e6 257 Gene3D G3DSA:3.30.1270.10 84 135 5.6E-28 T 22-04-2016 IPR026563 Transcriptional regulator TACO1-like, domain 2 SRM_RS11935 b295e7442893d015273c0bf891ad23aa 216 PANTHER PTHR40394:SF2 22 201 9.3E-60 T 22-04-2016 SRM_RS11935 b295e7442893d015273c0bf891ad23aa 216 Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III 98 179 6.4E-16 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 SRM_RS11935 b295e7442893d015273c0bf891ad23aa 216 PANTHER PTHR40394 22 201 9.3E-60 T 22-04-2016 SRM_RS11935 b295e7442893d015273c0bf891ad23aa 216 Gene3D G3DSA:1.10.760.10 90 186 1.4E-16 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 SRM_RS11935 b295e7442893d015273c0bf891ad23aa 216 SUPERFAMILY SSF46626 89 186 1.83E-18 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 SRM_RS11730 89bf5ee6dcefd461f17d4fa4f6bcecf1 404 TIGRFAM TIGR00033 aroC: chorismate synthase 2 384 2.0E-106 T 22-04-2016 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163|UniPathway: UPA00053 SRM_RS11730 89bf5ee6dcefd461f17d4fa4f6bcecf1 404 PANTHER PTHR21085 1 399 7.5E-141 T 22-04-2016 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163|UniPathway: UPA00053 SRM_RS11730 89bf5ee6dcefd461f17d4fa4f6bcecf1 404 Hamap MF_00300 Chorismate synthase [aroC]. 2 387 32.551 T 22-04-2016 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163|UniPathway: UPA00053 SRM_RS11730 89bf5ee6dcefd461f17d4fa4f6bcecf1 404 ProSitePatterns PS00787 Chorismate synthase signature 1. 8 23 - T 22-04-2016 IPR020541 Chorismate synthase, conserved site GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163|UniPathway: UPA00053 SRM_RS11730 89bf5ee6dcefd461f17d4fa4f6bcecf1 404 Pfam PF01264 Chorismate synthase 2 380 3.3E-105 T 22-04-2016 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163|UniPathway: UPA00053 SRM_RS11730 89bf5ee6dcefd461f17d4fa4f6bcecf1 404 PANTHER PTHR21085:SF0 1 399 7.5E-141 T 22-04-2016 SRM_RS11730 89bf5ee6dcefd461f17d4fa4f6bcecf1 404 SUPERFAMILY SSF103263 1 398 1.19E-121 T 22-04-2016 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163|UniPathway: UPA00053 SRM_RS11730 89bf5ee6dcefd461f17d4fa4f6bcecf1 404 PIRSF PIRSF001456 1 400 3.2E-107 T 22-04-2016 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163|UniPathway: UPA00053 SRM_RS11730 89bf5ee6dcefd461f17d4fa4f6bcecf1 404 Gene3D G3DSA:3.60.150.10 1 399 2.3E-128 T 22-04-2016 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163|UniPathway: UPA00053 SRM_RS03325 cf6a774b930cf2ad185ca704a5b77100 1346 Pfam PF00512 His Kinase A (phospho-acceptor) domain 818 883 3.3E-20 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SRM_RS03325 cf6a774b930cf2ad185ca704a5b77100 1346 SUPERFAMILY SSF47384 803 884 1.92E-21 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SRM_RS03325 cf6a774b930cf2ad185ca704a5b77100 1346 SUPERFAMILY SSF52172 1069 1187 9.96E-16 T 22-04-2016 IPR011006 CheY-like superfamily SRM_RS03325 cf6a774b930cf2ad185ca704a5b77100 1346 Gene3D G3DSA:3.40.50.2300 1207 1323 6.7E-40 T 22-04-2016 SRM_RS03325 cf6a774b930cf2ad185ca704a5b77100 1346 PRINTS PR00344 Bacterial sensor protein C-terminal signature 1009 1027 4.3E-15 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SRM_RS03325 cf6a774b930cf2ad185ca704a5b77100 1346 PRINTS PR00344 Bacterial sensor protein C-terminal signature 974 988 4.3E-15 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SRM_RS03325 cf6a774b930cf2ad185ca704a5b77100 1346 PRINTS PR00344 Bacterial sensor protein C-terminal signature 992 1002 4.3E-15 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SRM_RS03325 cf6a774b930cf2ad185ca704a5b77100 1346 PRINTS PR00344 Bacterial sensor protein C-terminal signature 1033 1046 4.3E-15 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SRM_RS03325 cf6a774b930cf2ad185ca704a5b77100 1346 SMART SM00387 930 1049 2.6E-43 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SRM_RS03325 cf6a774b930cf2ad185ca704a5b77100 1346 SUPERFAMILY SSF63829 393 625 2.62E-12 T 22-04-2016 SRM_RS03325 cf6a774b930cf2ad185ca704a5b77100 1346 Pfam PF00072 Response regulator receiver domain 1074 1154 6.7E-9 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SRM_RS03325 cf6a774b930cf2ad185ca704a5b77100 1346 Pfam PF00072 Response regulator receiver domain 1210 1322 4.8E-28 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SRM_RS03325 cf6a774b930cf2ad185ca704a5b77100 1346 Gene3D G3DSA:1.10.287.130 811 868 6.7E-17 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SRM_RS03325 cf6a774b930cf2ad185ca704a5b77100 1346 SUPERFAMILY SSF63829 60 245 7.19E-14 T 22-04-2016 SRM_RS03325 cf6a774b930cf2ad185ca704a5b77100 1346 Gene3D G3DSA:3.30.565.10 869 1049 2.6E-48 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SRM_RS03325 cf6a774b930cf2ad185ca704a5b77100 1346 Gene3D G3DSA:2.120.10.30 64 245 8.1E-8 T 22-04-2016 IPR011042 Six-bladed beta-propeller, TolB-like SRM_RS03325 cf6a774b930cf2ad185ca704a5b77100 1346 SUPERFAMILY SSF55874 872 1045 5.89E-46 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SRM_RS03325 cf6a774b930cf2ad185ca704a5b77100 1346 SMART SM00448 1208 1322 1.9E-41 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SRM_RS03325 cf6a774b930cf2ad185ca704a5b77100 1346 SMART SM00448 1072 1182 2.8E-4 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SRM_RS03325 cf6a774b930cf2ad185ca704a5b77100 1346 Gene3D G3DSA:3.40.50.2300 1065 1188 4.3E-16 T 22-04-2016 SRM_RS03325 cf6a774b930cf2ad185ca704a5b77100 1346 SMART SM00388 818 883 6.4E-26 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SRM_RS03325 cf6a774b930cf2ad185ca704a5b77100 1346 Gene3D G3DSA:2.120.10.30 377 627 2.3E-6 T 22-04-2016 IPR011042 Six-bladed beta-propeller, TolB-like SRM_RS03325 cf6a774b930cf2ad185ca704a5b77100 1346 Pfam PF07495 Y_Y_Y domain 692 755 1.0E-19 T 22-04-2016 IPR011123 Two component regulator three Y SRM_RS03325 cf6a774b930cf2ad185ca704a5b77100 1346 PANTHER PTHR24423 797 1052 4.7E-155 T 22-04-2016 SRM_RS03325 cf6a774b930cf2ad185ca704a5b77100 1346 PANTHER PTHR24423 627 650 4.7E-155 T 22-04-2016 SRM_RS03325 cf6a774b930cf2ad185ca704a5b77100 1346 PANTHER PTHR24423 1194 1322 4.7E-155 T 22-04-2016 SRM_RS03325 cf6a774b930cf2ad185ca704a5b77100 1346 SUPERFAMILY SSF63829 198 403 4.12E-8 T 22-04-2016 SRM_RS03325 cf6a774b930cf2ad185ca704a5b77100 1346 SUPERFAMILY SSF52172 1207 1323 2.28E-38 T 22-04-2016 IPR011006 CheY-like superfamily SRM_RS03325 cf6a774b930cf2ad185ca704a5b77100 1346 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 930 1048 3.8E-32 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SRM_RS02580 3073512cfa8ad34d08c7d526fe4cb9e7 169 PRINTS PR01346 Helicobacter neutrophil-activating protein A family signature 144 162 2.7E-10 T 22-04-2016 IPR002177 DNA-binding protein Dps GO:0006950|GO:0055114 SRM_RS02580 3073512cfa8ad34d08c7d526fe4cb9e7 169 PRINTS PR01346 Helicobacter neutrophil-activating protein A family signature 48 64 2.7E-10 T 22-04-2016 IPR002177 DNA-binding protein Dps GO:0006950|GO:0055114 SRM_RS02580 3073512cfa8ad34d08c7d526fe4cb9e7 169 PRINTS PR01346 Helicobacter neutrophil-activating protein A family signature 72 88 2.7E-10 T 22-04-2016 IPR002177 DNA-binding protein Dps GO:0006950|GO:0055114 SRM_RS02580 3073512cfa8ad34d08c7d526fe4cb9e7 169 PANTHER PTHR30295:SF6 7 168 1.3E-40 T 22-04-2016 SRM_RS02580 3073512cfa8ad34d08c7d526fe4cb9e7 169 Pfam PF00210 Ferritin-like domain 29 169 5.5E-23 T 22-04-2016 IPR008331 Ferritin/DPS protein domain GO:0006879|GO:0008199 SRM_RS02580 3073512cfa8ad34d08c7d526fe4cb9e7 169 SUPERFAMILY SSF47240 20 167 4.02E-33 T 22-04-2016 IPR009078 Ferritin-like superfamily SRM_RS02580 3073512cfa8ad34d08c7d526fe4cb9e7 169 PANTHER PTHR30295 7 168 1.3E-40 T 22-04-2016 SRM_RS02580 3073512cfa8ad34d08c7d526fe4cb9e7 169 Gene3D G3DSA:1.20.1260.10 8 168 6.5E-48 T 22-04-2016 IPR012347 Ferritin-related SRM_RS02580 3073512cfa8ad34d08c7d526fe4cb9e7 169 PIRSF PIRSF005900 6 169 1.4E-38 T 22-04-2016 IPR002177 DNA-binding protein Dps GO:0006950|GO:0055114 SRM_RS02580 3073512cfa8ad34d08c7d526fe4cb9e7 169 ProSitePatterns PS00818 Dps protein family signature 1. 48 64 - T 22-04-2016 IPR023188 DNA-binding protein Dps, conserved site GO:0016722|GO:0055114 SRM_RS13885 73b1cb9f870ca1823644c6aa9c786889 236 SUPERFAMILY SSF46894 136 234 2.72E-29 T 22-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 SRM_RS13885 73b1cb9f870ca1823644c6aa9c786889 236 PANTHER PTHR26402 9 236 6.3E-81 T 22-04-2016 SRM_RS13885 73b1cb9f870ca1823644c6aa9c786889 236 Pfam PF00486 Transcriptional regulatory protein, C terminal 157 233 2.2E-25 T 22-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 SRM_RS13885 73b1cb9f870ca1823644c6aa9c786889 236 Gene3D G3DSA:3.40.50.2300 5 128 6.0E-38 T 22-04-2016 SRM_RS13885 73b1cb9f870ca1823644c6aa9c786889 236 Gene3D G3DSA:1.10.10.10 136 235 4.7E-34 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SRM_RS13885 73b1cb9f870ca1823644c6aa9c786889 236 SMART SM00862 157 233 5.2E-25 T 22-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 SRM_RS13885 73b1cb9f870ca1823644c6aa9c786889 236 SUPERFAMILY SSF52172 6 134 1.71E-37 T 22-04-2016 IPR011006 CheY-like superfamily SRM_RS13885 73b1cb9f870ca1823644c6aa9c786889 236 PANTHER PTHR26402:SF50 9 236 6.3E-81 T 22-04-2016 SRM_RS13885 73b1cb9f870ca1823644c6aa9c786889 236 SMART SM00448 9 121 2.8E-38 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SRM_RS13885 73b1cb9f870ca1823644c6aa9c786889 236 Pfam PF00072 Response regulator receiver domain 12 121 4.9E-27 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SRM_RS16065 52a4267b425073f9d1520138b2b672f1 142 PANTHER PTHR11178 56 139 2.3E-21 T 22-04-2016 SRM_RS16065 52a4267b425073f9d1520138b2b672f1 142 Gene3D G3DSA:3.30.1370.70 54 140 3.3E-24 T 22-04-2016 IPR014824 Scaffold protein Nfu/NifU, N-terminal SRM_RS16065 52a4267b425073f9d1520138b2b672f1 142 SUPERFAMILY SSF110836 53 140 1.57E-22 T 22-04-2016 IPR014824 Scaffold protein Nfu/NifU, N-terminal SRM_RS16065 52a4267b425073f9d1520138b2b672f1 142 Pfam PF08712 Scaffold protein Nfu/NifU N terminal 56 140 2.0E-25 T 22-04-2016 IPR014824 Scaffold protein Nfu/NifU, N-terminal SRM_RS16065 52a4267b425073f9d1520138b2b672f1 142 SMART SM00932 55 142 1.9E-33 T 22-04-2016 IPR014824 Scaffold protein Nfu/NifU, N-terminal SRM_RS14975 869c62ecd721f9352f2e09b01b845ecf 216 SUPERFAMILY SSF52833 34 214 2.65E-33 T 22-04-2016 IPR012336 Thioredoxin-like fold SRM_RS14975 869c62ecd721f9352f2e09b01b845ecf 216 Gene3D G3DSA:3.40.30.10 10 173 2.2E-25 T 22-04-2016 IPR012336 Thioredoxin-like fold SRM_RS14975 869c62ecd721f9352f2e09b01b845ecf 216 Pfam PF00578 AhpC/TSA family 38 164 1.3E-13 T 22-04-2016 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15 SRM_RS14975 869c62ecd721f9352f2e09b01b845ecf 216 PANTHER PTHR10681:SF104 36 200 7.4E-21 T 22-04-2016 SRM_RS14975 869c62ecd721f9352f2e09b01b845ecf 216 PANTHER PTHR10681 36 200 7.4E-21 T 22-04-2016 SRM_RS05420 fbf62ba4d5f48001ce6f38beb9850252 851 Gene3D G3DSA:3.30.450.20 91 209 7.2E-12 T 22-04-2016 SRM_RS05420 fbf62ba4d5f48001ce6f38beb9850252 851 PANTHER PTHR24423 604 851 7.0E-97 T 22-04-2016 SRM_RS05420 fbf62ba4d5f48001ce6f38beb9850252 851 PANTHER PTHR24423 318 445 7.0E-97 T 22-04-2016 SRM_RS05420 fbf62ba4d5f48001ce6f38beb9850252 851 PANTHER PTHR24423 110 208 7.0E-97 T 22-04-2016 SRM_RS05420 fbf62ba4d5f48001ce6f38beb9850252 851 SUPERFAMILY SSF55781 457 625 2.21E-7 T 22-04-2016 IPR029016 GAF domain-like SRM_RS05420 fbf62ba4d5f48001ce6f38beb9850252 851 Pfam PF00512 His Kinase A (phospho-acceptor) domain 626 694 3.9E-14 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SRM_RS05420 fbf62ba4d5f48001ce6f38beb9850252 851 SUPERFAMILY SSF55785 319 433 5.76E-19 T 22-04-2016 IPR000014 PAS domain SRM_RS05420 fbf62ba4d5f48001ce6f38beb9850252 851 Gene3D G3DSA:3.30.565.10 701 850 3.9E-42 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SRM_RS05420 fbf62ba4d5f48001ce6f38beb9850252 851 SUPERFAMILY SSF55874 684 851 3.01E-41 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SRM_RS05420 fbf62ba4d5f48001ce6f38beb9850252 851 SUPERFAMILY SSF55785 115 217 2.79E-10 T 22-04-2016 IPR000014 PAS domain SRM_RS05420 fbf62ba4d5f48001ce6f38beb9850252 851 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 330 454 1.4E-16 T 22-04-2016 IPR000014 PAS domain SRM_RS05420 fbf62ba4d5f48001ce6f38beb9850252 851 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 215 329 8.5E-12 T 22-04-2016 IPR000014 PAS domain SRM_RS05420 fbf62ba4d5f48001ce6f38beb9850252 851 Pfam PF08448 PAS fold 225 324 6.6E-14 T 22-04-2016 IPR013656 PAS fold-4 SRM_RS05420 fbf62ba4d5f48001ce6f38beb9850252 851 SMART SM00387 740 851 1.1E-33 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SRM_RS05420 fbf62ba4d5f48001ce6f38beb9850252 851 SUPERFAMILY SSF55785 227 331 1.73E-16 T 22-04-2016 IPR000014 PAS domain SRM_RS05420 fbf62ba4d5f48001ce6f38beb9850252 851 PRINTS PR00344 Bacterial sensor protein C-terminal signature 778 792 9.5E-15 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SRM_RS05420 fbf62ba4d5f48001ce6f38beb9850252 851 PRINTS PR00344 Bacterial sensor protein C-terminal signature 813 831 9.5E-15 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SRM_RS05420 fbf62ba4d5f48001ce6f38beb9850252 851 PRINTS PR00344 Bacterial sensor protein C-terminal signature 837 850 9.5E-15 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SRM_RS05420 fbf62ba4d5f48001ce6f38beb9850252 851 PRINTS PR00344 Bacterial sensor protein C-terminal signature 796 806 9.5E-15 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SRM_RS05420 fbf62ba4d5f48001ce6f38beb9850252 851 SMART SM00388 625 694 6.6E-18 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SRM_RS05420 fbf62ba4d5f48001ce6f38beb9850252 851 Gene3D G3DSA:1.10.287.130 618 690 1.2E-13 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SRM_RS05420 fbf62ba4d5f48001ce6f38beb9850252 851 SMART SM00091 216 282 4.8E-7 T 22-04-2016 IPR000014 PAS domain SRM_RS05420 fbf62ba4d5f48001ce6f38beb9850252 851 SMART SM00091 334 402 6.6E-4 T 22-04-2016 IPR000014 PAS domain SRM_RS05420 fbf62ba4d5f48001ce6f38beb9850252 851 Gene3D G3DSA:3.30.450.40 449 617 6.0E-8 T 22-04-2016 IPR029016 GAF domain-like SRM_RS05420 fbf62ba4d5f48001ce6f38beb9850252 851 Gene3D G3DSA:3.30.450.20 321 435 5.5E-20 T 22-04-2016 SRM_RS05420 fbf62ba4d5f48001ce6f38beb9850252 851 Gene3D G3DSA:3.30.450.20 214 320 1.4E-22 T 22-04-2016 SRM_RS05420 fbf62ba4d5f48001ce6f38beb9850252 851 SUPERFAMILY SSF47384 611 694 1.92E-17 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SRM_RS05420 fbf62ba4d5f48001ce6f38beb9850252 851 Pfam PF13426 PAS domain 119 210 0.095 T 22-04-2016 IPR000014 PAS domain SRM_RS05420 fbf62ba4d5f48001ce6f38beb9850252 851 Pfam PF13426 PAS domain 351 434 5.6E-7 T 22-04-2016 IPR000014 PAS domain SRM_RS05420 fbf62ba4d5f48001ce6f38beb9850252 851 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 741 850 5.0E-25 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SRM_RS02390 1c2160e59774959cf195750faefa731f 806 Pfam PF03572 Peptidase family S41 604 766 1.4E-14 T 22-04-2016 IPR005151 Tail specific protease GO:0006508|GO:0008236 SRM_RS02390 1c2160e59774959cf195750faefa731f 806 SUPERFAMILY SSF52096 594 784 5.8E-34 T 22-04-2016 IPR029045 ClpP/crotonase-like domain SRM_RS02390 1c2160e59774959cf195750faefa731f 806 SUPERFAMILY SSF52096 412 499 5.8E-34 T 22-04-2016 IPR029045 ClpP/crotonase-like domain SRM_RS02390 1c2160e59774959cf195750faefa731f 806 Gene3D G3DSA:3.30.750.44 415 472 5.2E-4 T 22-04-2016 SRM_RS02390 1c2160e59774959cf195750faefa731f 806 SMART SM00245 566 768 0.0011 T 22-04-2016 IPR005151 Tail specific protease GO:0006508|GO:0008236 SRM_RS02390 1c2160e59774959cf195750faefa731f 806 Gene3D G3DSA:3.90.226.10 606 794 2.1E-24 T 22-04-2016 IPR029045 ClpP/crotonase-like domain SRM_RS02390 1c2160e59774959cf195750faefa731f 806 Gene3D G3DSA:2.30.42.10 511 578 0.001 T 22-04-2016 IPR001478 PDZ domain GO:0005515 SRM_RS14375 cbaf9ed4111221e934cc6c423d2797de 353 Pfam PF01312 FlhB HrpN YscU SpaS Family 5 346 1.2E-108 T 22-04-2016 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 SRM_RS14375 cbaf9ed4111221e934cc6c423d2797de 353 SUPERFAMILY SSF160544 252 350 5.89E-33 T 22-04-2016 IPR029025 Type III secretion system substrate exporter, C-terminal SRM_RS14375 cbaf9ed4111221e934cc6c423d2797de 353 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 8 30 9.2E-35 T 22-04-2016 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 SRM_RS14375 cbaf9ed4111221e934cc6c423d2797de 353 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 226 243 9.2E-35 T 22-04-2016 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 SRM_RS14375 cbaf9ed4111221e934cc6c423d2797de 353 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 301 322 9.2E-35 T 22-04-2016 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 SRM_RS14375 cbaf9ed4111221e934cc6c423d2797de 353 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 206 224 9.2E-35 T 22-04-2016 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 SRM_RS14375 cbaf9ed4111221e934cc6c423d2797de 353 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 271 286 9.2E-35 T 22-04-2016 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 SRM_RS14375 cbaf9ed4111221e934cc6c423d2797de 353 Gene3D G3DSA:3.40.1690.10 216 350 6.3E-48 T 22-04-2016 IPR029025 Type III secretion system substrate exporter, C-terminal SRM_RS14375 cbaf9ed4111221e934cc6c423d2797de 353 PANTHER PTHR30531 1 351 1.5E-96 T 22-04-2016 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 SRM_RS06815 486d22816948731155a60bccf68c9f0d 392 PIRSF PIRSF001554 1 392 3.0E-146 T 22-04-2016 IPR005809 Succinyl-CoA synthetase, beta subunit GO:0003824|GO:0008152 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: REACT_1046|UniPathway: UPA00223 SRM_RS06815 486d22816948731155a60bccf68c9f0d 392 Hamap MF_00558 Succinyl-CoA ligase [ADP-forming] subunit beta [sucC]. 1 390 41.574 T 22-04-2016 IPR005809 Succinyl-CoA synthetase, beta subunit GO:0003824|GO:0008152 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: REACT_1046|UniPathway: UPA00223 SRM_RS06815 486d22816948731155a60bccf68c9f0d 392 SUPERFAMILY SSF56059 1 242 2.29E-78 T 22-04-2016 SRM_RS06815 486d22816948731155a60bccf68c9f0d 392 ProSitePatterns PS01217 ATP-citrate lyase / succinyl-CoA ligases family signature 3. 261 286 - T 22-04-2016 IPR017866 Succinyl-CoA synthetase, beta subunit, conserved site KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|UniPathway: UPA00223 SRM_RS06815 486d22816948731155a60bccf68c9f0d 392 PANTHER PTHR11815 1 392 7.4E-205 T 22-04-2016 IPR005809 Succinyl-CoA synthetase, beta subunit GO:0003824|GO:0008152 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: REACT_1046|UniPathway: UPA00223 SRM_RS06815 486d22816948731155a60bccf68c9f0d 392 Gene3D G3DSA:3.40.50.261 245 385 4.6E-60 T 22-04-2016 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|UniPathway: UPA00223 SRM_RS06815 486d22816948731155a60bccf68c9f0d 392 Pfam PF00549 CoA-ligase 266 370 4.9E-23 T 22-04-2016 IPR005811 ATP-citrate lyase/succinyl-CoA ligase GO:0003824|GO:0008152 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|UniPathway: UPA00223 SRM_RS06815 486d22816948731155a60bccf68c9f0d 392 Gene3D G3DSA:3.30.1490.20 22 99 1.7E-31 T 22-04-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 SRM_RS06815 486d22816948731155a60bccf68c9f0d 392 SUPERFAMILY SSF52210 243 385 1.96E-48 T 22-04-2016 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|UniPathway: UPA00223 SRM_RS06815 486d22816948731155a60bccf68c9f0d 392 Pfam PF08442 ATP-grasp domain 2 206 5.8E-77 T 22-04-2016 IPR013650 ATP-grasp fold, succinyl-CoA synthetase-type KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|UniPathway: UPA00223 SRM_RS06815 486d22816948731155a60bccf68c9f0d 392 Gene3D G3DSA:3.30.470.20 100 243 2.8E-57 T 22-04-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 SRM_RS06815 486d22816948731155a60bccf68c9f0d 392 TIGRFAM TIGR01016 sucCoAbeta: succinate-CoA ligase, beta subunit 1 386 9.8E-156 T 22-04-2016 IPR005809 Succinyl-CoA synthetase, beta subunit GO:0003824|GO:0008152 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: REACT_1046|UniPathway: UPA00223 SRM_RS09440 89b8981cbe95fbb8b454a0de5b1f7f4c 195 PANTHER PTHR23407:SF1 3 193 2.4E-42 T 22-04-2016 IPR002698 5-formyltetrahydrofolate cyclo-ligase SRM_RS09440 89b8981cbe95fbb8b454a0de5b1f7f4c 195 Gene3D G3DSA:3.40.50.10420 8 193 2.4E-46 T 22-04-2016 IPR024185 5-formyltetrahydrofolate cyclo-ligase-like domain SRM_RS09440 89b8981cbe95fbb8b454a0de5b1f7f4c 195 PIRSF PIRSF006806 4 192 5.1E-34 T 22-04-2016 IPR002698 5-formyltetrahydrofolate cyclo-ligase SRM_RS09440 89b8981cbe95fbb8b454a0de5b1f7f4c 195 TIGRFAM TIGR02727 MTHFS_bact: 5-formyltetrahydrofolate cyclo-ligase 9 189 9.9E-39 T 22-04-2016 IPR002698 5-formyltetrahydrofolate cyclo-ligase SRM_RS09440 89b8981cbe95fbb8b454a0de5b1f7f4c 195 SUPERFAMILY SSF100950 8 193 2.37E-44 T 22-04-2016 SRM_RS09440 89b8981cbe95fbb8b454a0de5b1f7f4c 195 PANTHER PTHR23407 3 193 2.4E-42 T 22-04-2016 SRM_RS09440 89b8981cbe95fbb8b454a0de5b1f7f4c 195 Pfam PF01812 5-formyltetrahydrofolate cyclo-ligase family 9 189 2.3E-35 T 22-04-2016 IPR002698 5-formyltetrahydrofolate cyclo-ligase SRM_RS14175 825ebb0a2ac4bcbe824a9ec285120c5f 155 Pfam PF02410 Ribosomal silencing factor during starvation 29 124 1.8E-22 T 22-04-2016 SRM_RS14175 825ebb0a2ac4bcbe824a9ec285120c5f 155 Gene3D G3DSA:3.30.460.10 25 127 1.8E-29 T 22-04-2016 SRM_RS14175 825ebb0a2ac4bcbe824a9ec285120c5f 155 TIGRFAM TIGR00090 rsfS_iojap_ybeB: ribosome silencing factor 26 124 2.1E-29 T 22-04-2016 IPR004394 Protein Iojap/ribosomal silencing factor RsfS SRM_RS14175 825ebb0a2ac4bcbe824a9ec285120c5f 155 Hamap MF_01477 Ribosomal silencing factor RsfS [rsfS]. 17 125 22.851 T 22-04-2016 IPR004394 Protein Iojap/ribosomal silencing factor RsfS SRM_RS14175 825ebb0a2ac4bcbe824a9ec285120c5f 155 SUPERFAMILY SSF81301 25 128 5.07E-31 T 22-04-2016 SRM_RS15275 4533de602650c9419c8d9f6cce05eb4c 939 Gene3D G3DSA:2.140.10.30 138 653 1.9E-70 T 22-04-2016 IPR002469 Dipeptidylpeptidase IV, N-terminal domain GO:0006508 SRM_RS15275 4533de602650c9419c8d9f6cce05eb4c 939 Gene3D G3DSA:3.40.50.1820 660 916 7.8E-59 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold SRM_RS15275 4533de602650c9419c8d9f6cce05eb4c 939 Pfam PF00326 Prolyl oligopeptidase family 718 915 4.2E-33 T 22-04-2016 IPR001375 Peptidase S9, prolyl oligopeptidase, catalytic domain GO:0006508|GO:0008236 SRM_RS15275 4533de602650c9419c8d9f6cce05eb4c 939 PANTHER PTHR11731:SF118 118 353 6.4E-122 T 22-04-2016 SRM_RS15275 4533de602650c9419c8d9f6cce05eb4c 939 PANTHER PTHR11731:SF118 374 930 6.4E-122 T 22-04-2016 SRM_RS15275 4533de602650c9419c8d9f6cce05eb4c 939 SUPERFAMILY SSF53474 660 916 2.56E-51 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold SRM_RS15275 4533de602650c9419c8d9f6cce05eb4c 939 PANTHER PTHR11731 118 353 6.4E-122 T 22-04-2016 SRM_RS15275 4533de602650c9419c8d9f6cce05eb4c 939 PANTHER PTHR11731 374 930 6.4E-122 T 22-04-2016 SRM_RS15275 4533de602650c9419c8d9f6cce05eb4c 939 Pfam PF00930 Dipeptidyl peptidase IV (DPP IV) N-terminal region 329 627 1.5E-37 T 22-04-2016 IPR002469 Dipeptidylpeptidase IV, N-terminal domain GO:0006508 SRM_RS15275 4533de602650c9419c8d9f6cce05eb4c 939 SUPERFAMILY SSF82171 143 181 3.4E-31 T 22-04-2016 SRM_RS15275 4533de602650c9419c8d9f6cce05eb4c 939 SUPERFAMILY SSF82171 357 653 3.4E-31 T 22-04-2016 SRM_RS15275 4533de602650c9419c8d9f6cce05eb4c 939 SUPERFAMILY SSF82171 250 306 3.4E-31 T 22-04-2016 SRM_RS15275 4533de602650c9419c8d9f6cce05eb4c 939 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 720 744 3.9E-7 T 22-04-2016 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 SRM_RS15275 4533de602650c9419c8d9f6cce05eb4c 939 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 852 874 3.9E-7 T 22-04-2016 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 SRM_RS15275 4533de602650c9419c8d9f6cce05eb4c 939 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 780 800 3.9E-7 T 22-04-2016 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 SRM_RS15275 4533de602650c9419c8d9f6cce05eb4c 939 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 691 709 3.9E-7 T 22-04-2016 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 SRM_RS10340 b37dcae96e71631f6f1c30fb815a164c 289 SUPERFAMILY SSF109998 33 166 1.96E-14 T 22-04-2016 IPR027304 Trigger factor/SurA domain SRM_RS10340 b37dcae96e71631f6f1c30fb815a164c 289 Pfam PF13145 PPIC-type PPIASE domain 122 253 7.4E-17 T 22-04-2016 IPR000297 Peptidyl-prolyl cis-trans isomerase, PpiC-type GO:0016853 SRM_RS10340 b37dcae96e71631f6f1c30fb815a164c 289 SUPERFAMILY SSF54534 136 237 1.31E-6 T 22-04-2016 SRM_RS10340 b37dcae96e71631f6f1c30fb815a164c 289 Gene3D G3DSA:3.10.50.40 154 261 1.1E-8 T 22-04-2016 SRM_RS07420 2898a463ab0d6962b79d409de1e83322 273 PANTHER PTHR34266:SF2 13 273 5.7E-142 T 22-04-2016 SRM_RS07420 2898a463ab0d6962b79d409de1e83322 273 Gene3D G3DSA:3.20.20.70 19 271 8.0E-56 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 SRM_RS07420 2898a463ab0d6962b79d409de1e83322 273 SUPERFAMILY SSF110399 17 258 9.94E-85 T 22-04-2016 IPR008867 Thiazole biosynthesis GO:0009228 KEGG: 00730+2.8.1.10|MetaCyc: PWY-6891|MetaCyc: PWY-6892|UniPathway: UPA00060 SRM_RS07420 2898a463ab0d6962b79d409de1e83322 273 Hamap MF_00443 Thiazole synthase [thiG]. 18 272 43.304 T 22-04-2016 IPR008867 Thiazole biosynthesis GO:0009228 KEGG: 00730+2.8.1.10|MetaCyc: PWY-6891|MetaCyc: PWY-6892|UniPathway: UPA00060 SRM_RS07420 2898a463ab0d6962b79d409de1e83322 273 PANTHER PTHR34266 13 273 5.7E-142 T 22-04-2016 SRM_RS07420 2898a463ab0d6962b79d409de1e83322 273 Pfam PF05690 Thiazole biosynthesis protein ThiG 21 266 5.1E-106 T 22-04-2016 SRM_RS05295 bd5657dafb3eb73d90bb76c1c4aae744 709 TIGRFAM TIGR01104 V_PPase: V-type H(+)-translocating pyrophosphatase 12 705 2.2E-233 T 22-04-2016 IPR004131 Pyrophosphate-energised proton pump GO:0004427|GO:0009678|GO:0015992|GO:0016020 KEGG: 00190+3.6.1.1 SRM_RS05295 bd5657dafb3eb73d90bb76c1c4aae744 709 Pfam PF03030 Inorganic H+ pyrophosphatase 18 700 3.3E-251 T 22-04-2016 IPR004131 Pyrophosphate-energised proton pump GO:0004427|GO:0009678|GO:0015992|GO:0016020 KEGG: 00190+3.6.1.1 SRM_RS05295 bd5657dafb3eb73d90bb76c1c4aae744 709 PANTHER PTHR31998 12 705 2.3E-304 T 22-04-2016 SRM_RS05295 bd5657dafb3eb73d90bb76c1c4aae744 709 Hamap MF_01129 Putative K(+)-stimulated pyrophosphate-energized sodium pump [hppA]. 7 705 23.832 T 22-04-2016 IPR004131 Pyrophosphate-energised proton pump GO:0004427|GO:0009678|GO:0015992|GO:0016020 KEGG: 00190+3.6.1.1 SRM_RS05295 bd5657dafb3eb73d90bb76c1c4aae744 709 PANTHER PTHR31998:SF0 12 705 2.3E-304 T 22-04-2016 SRM_RS05295 bd5657dafb3eb73d90bb76c1c4aae744 709 PIRSF PIRSF001265 3 708 1.3E-245 T 22-04-2016 IPR004131 Pyrophosphate-energised proton pump GO:0004427|GO:0009678|GO:0015992|GO:0016020 KEGG: 00190+3.6.1.1 SRM_RS12270 4ec92887d179cf1b6f3cc4abd4da9699 338 Gene3D G3DSA:3.40.1390.20 17 147 3.6E-36 T 22-04-2016 IPR028979 HPr(Ser) kinase/phosphorylase, N-terminal domain-like SRM_RS12270 4ec92887d179cf1b6f3cc4abd4da9699 338 SUPERFAMILY SSF53795 150 313 7.02E-33 T 22-04-2016 SRM_RS12270 4ec92887d179cf1b6f3cc4abd4da9699 338 SUPERFAMILY SSF75138 18 146 3.14E-29 T 22-04-2016 IPR028979 HPr(Ser) kinase/phosphorylase, N-terminal domain-like SRM_RS12270 4ec92887d179cf1b6f3cc4abd4da9699 338 Gene3D G3DSA:3.40.50.300 151 320 9.1E-59 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SRM_RS12270 4ec92887d179cf1b6f3cc4abd4da9699 338 PANTHER PTHR30305 37 325 1.1E-102 T 22-04-2016 SRM_RS12270 4ec92887d179cf1b6f3cc4abd4da9699 338 TIGRFAM TIGR00679 hpr-ser: HPr(Ser) kinase/phosphatase 17 317 4.8E-108 T 22-04-2016 IPR003755 HPr(Ser) kinase/phosphorylase GO:0000155|GO:0000160|GO:0005524|GO:0006109 SRM_RS12270 4ec92887d179cf1b6f3cc4abd4da9699 338 PANTHER PTHR30305:SF1 37 325 1.1E-102 T 22-04-2016 SRM_RS12270 4ec92887d179cf1b6f3cc4abd4da9699 338 Pfam PF02603 HPr Serine kinase N terminus 18 142 1.0E-31 T 22-04-2016 IPR011126 HPr(Ser) kinase/phosphorylase, N-terminal GO:0000155|GO:0000160|GO:0004672|GO:0005524|GO:0006109 SRM_RS12270 4ec92887d179cf1b6f3cc4abd4da9699 338 Hamap MF_01249 HPr kinase/phosphorylase [hprK]. 11 321 35.827 T 22-04-2016 IPR003755 HPr(Ser) kinase/phosphorylase GO:0000155|GO:0000160|GO:0005524|GO:0006109 SRM_RS12270 4ec92887d179cf1b6f3cc4abd4da9699 338 Pfam PF07475 HPr Serine kinase C-terminal domain 145 313 2.1E-64 T 22-04-2016 IPR011104 HPr kinase/phosphorylase, C-terminal GO:0000155|GO:0000160|GO:0004672|GO:0005524|GO:0006109 SRM_RS10670 992faa8ddc10a03c6608051aa9a54517 430 SUPERFAMILY SSF56059 102 317 1.03E-57 T 22-04-2016 SRM_RS10670 992faa8ddc10a03c6608051aa9a54517 430 Pfam PF02844 Phosphoribosylglycinamide synthetase, N domain 1 100 5.7E-33 T 22-04-2016 IPR020562 Phosphoribosylglycinamide synthetase, N-terminal GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|UniPathway: UPA00074 SRM_RS10670 992faa8ddc10a03c6608051aa9a54517 430 Hamap MF_00138 Phosphoribosylamine--glycine ligase [purD]. 1 424 43.121 T 22-04-2016 IPR000115 Phosphoribosylglycinamide synthetase GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|UniPathway: UPA00074 SRM_RS10670 992faa8ddc10a03c6608051aa9a54517 430 Gene3D G3DSA:3.40.50.20 2 93 2.1E-35 T 22-04-2016 IPR016185 Pre-ATP-grasp domain SRM_RS10670 992faa8ddc10a03c6608051aa9a54517 430 SMART SM01210 329 424 6.1E-44 T 22-04-2016 IPR020560 Phosphoribosylglycinamide synthetase, C-domain GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|UniPathway: UPA00074 SRM_RS10670 992faa8ddc10a03c6608051aa9a54517 430 SUPERFAMILY SSF52440 1 101 3.74E-33 T 22-04-2016 IPR016185 Pre-ATP-grasp domain SRM_RS10670 992faa8ddc10a03c6608051aa9a54517 430 ProSitePatterns PS00184 Phosphoribosylglycinamide synthetase signature. 289 296 - T 22-04-2016 IPR020559 Phosphoribosylglycinamide synthetase, conserved site GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|UniPathway: UPA00074 SRM_RS10670 992faa8ddc10a03c6608051aa9a54517 430 Pfam PF02843 Phosphoribosylglycinamide synthetase, C domain 330 422 2.0E-28 T 22-04-2016 IPR020560 Phosphoribosylglycinamide synthetase, C-domain GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|UniPathway: UPA00074 SRM_RS10670 992faa8ddc10a03c6608051aa9a54517 430 PANTHER PTHR10520 1 427 1.6E-226 T 22-04-2016 SRM_RS10670 992faa8ddc10a03c6608051aa9a54517 430 Gene3D G3DSA:3.30.470.20 191 324 1.7E-55 T 22-04-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 SRM_RS10670 992faa8ddc10a03c6608051aa9a54517 430 Gene3D G3DSA:3.90.600.10 329 422 2.0E-32 T 22-04-2016 IPR020560 Phosphoribosylglycinamide synthetase, C-domain GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|UniPathway: UPA00074 SRM_RS10670 992faa8ddc10a03c6608051aa9a54517 430 Pfam PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain 101 295 2.5E-72 T 22-04-2016 IPR020561 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|UniPathway: UPA00074 SRM_RS10670 992faa8ddc10a03c6608051aa9a54517 430 Gene3D G3DSA:3.30.1490.20 126 190 7.9E-24 T 22-04-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 SRM_RS10670 992faa8ddc10a03c6608051aa9a54517 430 TIGRFAM TIGR00877 purD: phosphoribosylamine--glycine ligase 1 423 6.6E-156 T 22-04-2016 IPR000115 Phosphoribosylglycinamide synthetase GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|UniPathway: UPA00074 SRM_RS10670 992faa8ddc10a03c6608051aa9a54517 430 SMART SM01209 101 295 4.4E-123 T 22-04-2016 SRM_RS10670 992faa8ddc10a03c6608051aa9a54517 430 SUPERFAMILY SSF51246 328 423 3.03E-28 T 22-04-2016 IPR011054 Rudiment single hybrid motif SRM_RS09540 23b3b33865b09cb036428fdba5c9f32f 157 SUPERFAMILY SSF69765 1 155 6.15E-65 T 22-04-2016 IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560|UniPathway: UPA00056 SRM_RS09540 23b3b33865b09cb036428fdba5c9f32f 157 Hamap MF_00107 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase [ispF]. 1 156 37.111 T 22-04-2016 IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560|UniPathway: UPA00056 SRM_RS09540 23b3b33865b09cb036428fdba5c9f32f 157 Pfam PF02542 YgbB family 1 155 2.8E-65 T 22-04-2016 IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560|UniPathway: UPA00056 SRM_RS09540 23b3b33865b09cb036428fdba5c9f32f 157 PANTHER PTHR32125 1 150 6.5E-50 T 22-04-2016 SRM_RS09540 23b3b33865b09cb036428fdba5c9f32f 157 Gene3D G3DSA:3.30.1330.50 1 155 4.0E-70 T 22-04-2016 IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560|UniPathway: UPA00056 SRM_RS09540 23b3b33865b09cb036428fdba5c9f32f 157 TIGRFAM TIGR00151 ispF: 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase 2 155 9.0E-67 T 22-04-2016 IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560|UniPathway: UPA00056 SRM_RS09540 23b3b33865b09cb036428fdba5c9f32f 157 ProSitePatterns PS01350 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase signature. 35 50 - T 22-04-2016 IPR020555 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase, conserved site GO:0008685 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560|UniPathway: UPA00056 SRM_RS13560 c35926066b4068f41f90b74c91e02ecf 878 Pfam PF17148 Domain of unknown function (DUF5117) 115 308 1.7E-39 T 22-04-2016 IPR033413 Domain of unknown function DUF5117 SRM_RS13560 c35926066b4068f41f90b74c91e02ecf 878 Gene3D G3DSA:3.40.390.10 320 520 6.2E-9 T 22-04-2016 IPR024079 Metallopeptidase, catalytic domain GO:0008237 SRM_RS13560 c35926066b4068f41f90b74c91e02ecf 878 PANTHER PTHR38478 64 828 1.9E-106 T 22-04-2016 SRM_RS13560 c35926066b4068f41f90b74c91e02ecf 878 Pfam PF16313 Met-zincin 443 751 1.8E-65 T 22-04-2016 IPR032534 Domian of unknown function DUF4953 SRM_RS13560 c35926066b4068f41f90b74c91e02ecf 878 SUPERFAMILY SSF55486 318 524 5.06E-25 T 22-04-2016 SRM_RS14005 4597b0693d69665159e2e2675ee32e5f 239 PRINTS PR00251 Bacterial opsin signature 191 209 2.0E-27 T 22-04-2016 IPR001425 Archaeal/bacterial/fungal rhodopsins GO:0005216|GO:0006811|GO:0016020 SRM_RS14005 4597b0693d69665159e2e2675ee32e5f 239 PRINTS PR00251 Bacterial opsin signature 33 53 2.0E-27 T 22-04-2016 IPR001425 Archaeal/bacterial/fungal rhodopsins GO:0005216|GO:0006811|GO:0016020 SRM_RS14005 4597b0693d69665159e2e2675ee32e5f 239 PRINTS PR00251 Bacterial opsin signature 160 178 2.0E-27 T 22-04-2016 IPR001425 Archaeal/bacterial/fungal rhodopsins GO:0005216|GO:0006811|GO:0016020 SRM_RS14005 4597b0693d69665159e2e2675ee32e5f 239 PRINTS PR00251 Bacterial opsin signature 67 88 2.0E-27 T 22-04-2016 IPR001425 Archaeal/bacterial/fungal rhodopsins GO:0005216|GO:0006811|GO:0016020 SRM_RS14005 4597b0693d69665159e2e2675ee32e5f 239 PRINTS PR00251 Bacterial opsin signature 95 114 2.0E-27 T 22-04-2016 IPR001425 Archaeal/bacterial/fungal rhodopsins GO:0005216|GO:0006811|GO:0016020 SRM_RS14005 4597b0693d69665159e2e2675ee32e5f 239 PRINTS PR00251 Bacterial opsin signature 119 140 2.0E-27 T 22-04-2016 IPR001425 Archaeal/bacterial/fungal rhodopsins GO:0005216|GO:0006811|GO:0016020 SRM_RS14005 4597b0693d69665159e2e2675ee32e5f 239 Gene3D G3DSA:1.20.1070.10 34 221 9.1E-43 T 22-04-2016 SRM_RS14005 4597b0693d69665159e2e2675ee32e5f 239 ProSitePatterns PS00950 Bacterial rhodopsins signature 1. 69 81 - T 22-04-2016 IPR018229 Rhodopsin, retinal binding site GO:0005216|GO:0006811|GO:0016020 SRM_RS14005 4597b0693d69665159e2e2675ee32e5f 239 Pfam PF01036 Bacteriorhodopsin-like protein 6 217 7.7E-42 T 22-04-2016 IPR001425 Archaeal/bacterial/fungal rhodopsins GO:0005216|GO:0006811|GO:0016020 SRM_RS14005 4597b0693d69665159e2e2675ee32e5f 239 PANTHER PTHR28286 69 223 3.8E-13 T 22-04-2016 SRM_RS14005 4597b0693d69665159e2e2675ee32e5f 239 SMART SM01021 4 227 9.6E-76 T 22-04-2016 IPR001425 Archaeal/bacterial/fungal rhodopsins GO:0005216|GO:0006811|GO:0016020 SRM_RS14005 4597b0693d69665159e2e2675ee32e5f 239 ProSitePatterns PS00327 Bacterial rhodopsins retinal binding site. 193 204 - T 22-04-2016 IPR018229 Rhodopsin, retinal binding site GO:0005216|GO:0006811|GO:0016020 SRM_RS14005 4597b0693d69665159e2e2675ee32e5f 239 SUPERFAMILY SSF81321 2 216 6.72E-46 T 22-04-2016 SRM_RS08345 d4a827bef4a9a823327f1cdc41e50016 135 SUPERFAMILY SSF141091 1 103 1.27E-33 T 22-04-2016 IPR028909 Ribosomal protein L21-like GO:0005840 SRM_RS08345 d4a827bef4a9a823327f1cdc41e50016 135 Hamap MF_01363 50S ribosomal protein L21 [rplU]. 1 105 24.723 T 22-04-2016 IPR001787 Ribosomal protein L21 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 SRM_RS08345 d4a827bef4a9a823327f1cdc41e50016 135 PANTHER PTHR21349 1 125 1.4E-39 T 22-04-2016 SRM_RS08345 d4a827bef4a9a823327f1cdc41e50016 135 TIGRFAM TIGR00061 L21: ribosomal protein bL21 2 103 5.4E-29 T 22-04-2016 IPR001787 Ribosomal protein L21 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 SRM_RS08345 d4a827bef4a9a823327f1cdc41e50016 135 Pfam PF00829 Ribosomal prokaryotic L21 protein 1 102 2.9E-36 T 22-04-2016 IPR028909 Ribosomal protein L21-like GO:0005840 SRM_RS08345 d4a827bef4a9a823327f1cdc41e50016 135 ProSitePatterns PS01169 Ribosomal protein L21 signature. 74 96 - T 22-04-2016 IPR018258 Ribosomal protein L21, conserved site GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 SRM_RS13995 a2b99bde78934c302d438cf224ecade0 959 SUPERFAMILY SSF55785 222 333 2.27E-16 T 22-04-2016 IPR000014 PAS domain SRM_RS13995 a2b99bde78934c302d438cf224ecade0 959 Pfam PF08447 PAS fold 607 691 4.0E-12 T 22-04-2016 IPR013655 PAS fold-3 GO:0005515 SRM_RS13995 a2b99bde78934c302d438cf224ecade0 959 SMART SM00086 656 697 2.9E-6 T 22-04-2016 IPR001610 PAC motif SRM_RS13995 a2b99bde78934c302d438cf224ecade0 959 SMART SM00086 409 451 0.77 T 22-04-2016 IPR001610 PAC motif SRM_RS13995 a2b99bde78934c302d438cf224ecade0 959 SMART SM00086 529 571 400.0 T 22-04-2016 IPR001610 PAC motif SRM_RS13995 a2b99bde78934c302d438cf224ecade0 959 SMART SM00086 283 324 110.0 T 22-04-2016 IPR001610 PAC motif SRM_RS13995 a2b99bde78934c302d438cf224ecade0 959 SMART SM00388 724 794 3.8E-17 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SRM_RS13995 a2b99bde78934c302d438cf224ecade0 959 Gene3D G3DSA:3.30.450.20 449 560 1.6E-17 T 22-04-2016 SRM_RS13995 a2b99bde78934c302d438cf224ecade0 959 SUPERFAMILY SSF55785 447 564 3.24E-18 T 22-04-2016 IPR000014 PAS domain SRM_RS13995 a2b99bde78934c302d438cf224ecade0 959 Gene3D G3DSA:3.30.450.20 199 321 5.3E-17 T 22-04-2016 SRM_RS13995 a2b99bde78934c302d438cf224ecade0 959 Gene3D G3DSA:3.30.450.20 322 448 2.9E-23 T 22-04-2016 SRM_RS13995 a2b99bde78934c302d438cf224ecade0 959 Pfam PF08448 PAS fold 349 453 7.3E-16 T 22-04-2016 IPR013656 PAS fold-4 SRM_RS13995 a2b99bde78934c302d438cf224ecade0 959 Pfam PF08448 PAS fold 470 573 6.4E-13 T 22-04-2016 IPR013656 PAS fold-4 SRM_RS13995 a2b99bde78934c302d438cf224ecade0 959 Pfam PF08448 PAS fold 217 326 1.2E-8 T 22-04-2016 IPR013656 PAS fold-4 SRM_RS13995 a2b99bde78934c302d438cf224ecade0 959 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 838 948 4.7E-26 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SRM_RS13995 a2b99bde78934c302d438cf224ecade0 959 Gene3D G3DSA:3.30.450.20 561 713 4.9E-29 T 22-04-2016 SRM_RS13995 a2b99bde78934c302d438cf224ecade0 959 SMART SM00387 838 950 4.4E-37 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SRM_RS13995 a2b99bde78934c302d438cf224ecade0 959 SMART SM00091 463 529 0.2 T 22-04-2016 IPR000014 PAS domain SRM_RS13995 a2b99bde78934c302d438cf224ecade0 959 SMART SM00091 336 404 0.014 T 22-04-2016 IPR000014 PAS domain SRM_RS13995 a2b99bde78934c302d438cf224ecade0 959 SMART SM00091 211 278 1.9E-6 T 22-04-2016 IPR000014 PAS domain SRM_RS13995 a2b99bde78934c302d438cf224ecade0 959 Gene3D G3DSA:3.30.565.10 794 953 3.0E-44 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SRM_RS13995 a2b99bde78934c302d438cf224ecade0 959 SUPERFAMILY SSF55874 784 948 1.7E-42 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SRM_RS13995 a2b99bde78934c302d438cf224ecade0 959 SUPERFAMILY SSF55785 321 449 4.01E-21 T 22-04-2016 IPR000014 PAS domain SRM_RS13995 a2b99bde78934c302d438cf224ecade0 959 Pfam PF00512 His Kinase A (phospho-acceptor) domain 725 794 4.6E-14 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SRM_RS13995 a2b99bde78934c302d438cf224ecade0 959 PANTHER PTHR24423 656 959 2.4E-120 T 22-04-2016 SRM_RS13995 a2b99bde78934c302d438cf224ecade0 959 PANTHER PTHR24423 319 535 2.4E-120 T 22-04-2016 SRM_RS13995 a2b99bde78934c302d438cf224ecade0 959 SUPERFAMILY SSF55785 568 695 1.08E-18 T 22-04-2016 IPR000014 PAS domain SRM_RS13995 a2b99bde78934c302d438cf224ecade0 959 Gene3D G3DSA:1.10.287.130 716 790 1.1E-16 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SRM_RS13995 a2b99bde78934c302d438cf224ecade0 959 PRINTS PR00344 Bacterial sensor protein C-terminal signature 875 889 4.6E-14 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SRM_RS13995 a2b99bde78934c302d438cf224ecade0 959 PRINTS PR00344 Bacterial sensor protein C-terminal signature 893 903 4.6E-14 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SRM_RS13995 a2b99bde78934c302d438cf224ecade0 959 PRINTS PR00344 Bacterial sensor protein C-terminal signature 934 947 4.6E-14 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SRM_RS13995 a2b99bde78934c302d438cf224ecade0 959 PRINTS PR00344 Bacterial sensor protein C-terminal signature 910 928 4.6E-14 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SRM_RS13995 a2b99bde78934c302d438cf224ecade0 959 SUPERFAMILY SSF47384 713 796 1.2E-17 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SRM_RS13995 a2b99bde78934c302d438cf224ecade0 959 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 332 458 5.4E-16 T 22-04-2016 IPR000014 PAS domain SRM_RS13995 a2b99bde78934c302d438cf224ecade0 959 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 462 578 1.7E-9 T 22-04-2016 IPR000014 PAS domain SRM_RS13995 a2b99bde78934c302d438cf224ecade0 959 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 215 331 1.0E-11 T 22-04-2016 IPR000014 PAS domain SRM_RS13995 a2b99bde78934c302d438cf224ecade0 959 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 581 704 1.5E-8 T 22-04-2016 IPR000014 PAS domain SRM_RS03475 ea215706e4474d16cb216bc00fdc2e32 712 Pfam PF00580 UvrD/REP helicase N-terminal domain 29 296 1.0E-59 T 22-04-2016 IPR014016 UvrD-like Helicase, ATP-binding domain GO:0005524 SRM_RS03475 ea215706e4474d16cb216bc00fdc2e32 712 PANTHER PTHR11070 14 669 3.9E-175 T 22-04-2016 IPR000212 DNA helicase, UvrD/REP type GO:0003677|GO:0004003|GO:0005524 SRM_RS03475 ea215706e4474d16cb216bc00fdc2e32 712 Pfam PF13361 UvrD-like helicase C-terminal domain 302 627 1.1E-51 T 22-04-2016 IPR014017 UvrD-like DNA helicase, C-terminal GO:0005524|GO:0016787 SRM_RS03475 ea215706e4474d16cb216bc00fdc2e32 712 Gene3D G3DSA:3.40.50.300 306 413 2.7E-55 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SRM_RS03475 ea215706e4474d16cb216bc00fdc2e32 712 Gene3D G3DSA:3.40.50.300 565 656 2.7E-55 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SRM_RS03475 ea215706e4474d16cb216bc00fdc2e32 712 PANTHER PTHR11070:SF3 14 669 3.9E-175 T 22-04-2016 SRM_RS03475 ea215706e4474d16cb216bc00fdc2e32 712 SUPERFAMILY SSF52540 27 657 7.32E-134 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SRM_RS03475 ea215706e4474d16cb216bc00fdc2e32 712 Gene3D G3DSA:1.10.486.10 414 542 4.5E-14 T 22-04-2016 SRM_RS03475 ea215706e4474d16cb216bc00fdc2e32 712 Gene3D G3DSA:3.40.50.300 28 301 2.9E-73 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SRM_RS12080 cd4c799bbfbeb83aa0e6361c9c651379 200 PANTHER PTHR15160 19 191 2.3E-35 T 22-04-2016 SRM_RS12080 cd4c799bbfbeb83aa0e6361c9c651379 200 PANTHER PTHR15160:SF1 19 191 2.3E-35 T 22-04-2016 SRM_RS12080 cd4c799bbfbeb83aa0e6361c9c651379 200 Gene3D G3DSA:4.10.860.10 143 196 2.1E-8 T 22-04-2016 IPR001943 UVR domain GO:0005515 SRM_RS12080 cd4c799bbfbeb83aa0e6361c9c651379 200 Pfam PF02577 Bifunctional nuclease 8 134 9.0E-46 T 22-04-2016 IPR003729 Bifunctional nuclease domain GO:0004518 SRM_RS12080 cd4c799bbfbeb83aa0e6361c9c651379 200 SUPERFAMILY SSF103256 4 139 3.92E-43 T 22-04-2016 IPR003729 Bifunctional nuclease domain GO:0004518 SRM_RS12080 cd4c799bbfbeb83aa0e6361c9c651379 200 SUPERFAMILY SSF46600 155 196 1.31E-7 T 22-04-2016 IPR001943 UVR domain GO:0005515 SRM_RS12080 cd4c799bbfbeb83aa0e6361c9c651379 200 Pfam PF02151 UvrB/uvrC motif 161 193 8.9E-11 T 22-04-2016 IPR001943 UVR domain GO:0005515 SRM_RS06770 a096c79c70695517daaec4afb689783f 398 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 245 390 4.4E-34 T 22-04-2016 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 SRM_RS06770 a096c79c70695517daaec4afb689783f 398 PANTHER PTHR10909:SF152 15 397 4.5E-196 T 22-04-2016 SRM_RS06770 a096c79c70695517daaec4afb689783f 398 PANTHER PTHR10909 15 397 4.5E-196 T 22-04-2016 SRM_RS06770 a096c79c70695517daaec4afb689783f 398 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 25 137 1.5E-31 T 22-04-2016 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 SRM_RS06770 a096c79c70695517daaec4afb689783f 398 Gene3D G3DSA:1.10.540.10 12 139 7.9E-38 T 22-04-2016 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 SRM_RS06770 a096c79c70695517daaec4afb689783f 398 Gene3D G3DSA:1.20.140.10 234 394 4.3E-46 T 22-04-2016 SRM_RS06770 a096c79c70695517daaec4afb689783f 398 SUPERFAMILY SSF47203 245 394 5.48E-41 T 22-04-2016 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 SRM_RS06770 a096c79c70695517daaec4afb689783f 398 SUPERFAMILY SSF56645 12 244 8.38E-74 T 22-04-2016 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain GO:0008152|GO:0016627|GO:0055114 SRM_RS06770 a096c79c70695517daaec4afb689783f 398 Gene3D G3DSA:2.40.110.10 140 233 3.9E-33 T 22-04-2016 SRM_RS06770 a096c79c70695517daaec4afb689783f 398 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 141 232 2.4E-23 T 22-04-2016 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0003995|GO:0055114 SRM_RS06775 54d794a7b626fa7cd9dfcd0e8e324aca 193 PRINTS PR01346 Helicobacter neutrophil-activating protein A family signature 60 76 5.2E-7 T 22-04-2016 IPR002177 DNA-binding protein Dps GO:0006950|GO:0055114 SRM_RS06775 54d794a7b626fa7cd9dfcd0e8e324aca 193 PRINTS PR01346 Helicobacter neutrophil-activating protein A family signature 84 100 5.2E-7 T 22-04-2016 IPR002177 DNA-binding protein Dps GO:0006950|GO:0055114 SRM_RS06775 54d794a7b626fa7cd9dfcd0e8e324aca 193 Pfam PF00210 Ferritin-like domain 42 180 9.8E-30 T 22-04-2016 IPR008331 Ferritin/DPS protein domain GO:0006879|GO:0008199 SRM_RS06775 54d794a7b626fa7cd9dfcd0e8e324aca 193 PANTHER PTHR30295 18 184 5.4E-39 T 22-04-2016 SRM_RS06775 54d794a7b626fa7cd9dfcd0e8e324aca 193 ProSitePatterns PS00819 Dps protein family signature 2. 86 100 - T 22-04-2016 IPR023188 DNA-binding protein Dps, conserved site GO:0016722|GO:0055114 SRM_RS06775 54d794a7b626fa7cd9dfcd0e8e324aca 193 SUPERFAMILY SSF47240 26 182 2.99E-42 T 22-04-2016 IPR009078 Ferritin-like superfamily SRM_RS06775 54d794a7b626fa7cd9dfcd0e8e324aca 193 Gene3D G3DSA:1.20.1260.10 18 183 1.3E-53 T 22-04-2016 IPR012347 Ferritin-related SRM_RS06775 54d794a7b626fa7cd9dfcd0e8e324aca 193 ProSitePatterns PS00818 Dps protein family signature 1. 60 76 - T 22-04-2016 IPR023188 DNA-binding protein Dps, conserved site GO:0016722|GO:0055114 SRM_RS06775 54d794a7b626fa7cd9dfcd0e8e324aca 193 PANTHER PTHR30295:SF8 18 184 5.4E-39 T 22-04-2016 SRM_RS06775 54d794a7b626fa7cd9dfcd0e8e324aca 193 PIRSF PIRSF005900 18 184 1.1E-36 T 22-04-2016 IPR002177 DNA-binding protein Dps GO:0006950|GO:0055114 SRM_RS13385 b13f81e3aa5bd8da42813a5513f29ce7 466 SUPERFAMILY SSF55785 273 392 3.84E-15 T 22-04-2016 IPR000014 PAS domain SRM_RS13385 b13f81e3aa5bd8da42813a5513f29ce7 466 Gene3D G3DSA:1.10.287.130 413 451 8.8E-13 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SRM_RS13385 b13f81e3aa5bd8da42813a5513f29ce7 466 Gene3D G3DSA:3.30.450.20 275 394 8.3E-17 T 22-04-2016 SRM_RS13385 b13f81e3aa5bd8da42813a5513f29ce7 466 PANTHER PTHR24423:SF382 270 447 5.3E-31 T 22-04-2016 SRM_RS13385 b13f81e3aa5bd8da42813a5513f29ce7 466 SUPERFAMILY SSF47384 409 463 2.55E-12 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SRM_RS13385 b13f81e3aa5bd8da42813a5513f29ce7 466 SMART SM00091 286 352 2.3E-6 T 22-04-2016 IPR000014 PAS domain SRM_RS13385 b13f81e3aa5bd8da42813a5513f29ce7 466 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 284 401 2.6E-14 T 22-04-2016 IPR000014 PAS domain SRM_RS13385 b13f81e3aa5bd8da42813a5513f29ce7 466 PANTHER PTHR24423 270 447 5.3E-31 T 22-04-2016 SRM_RS13385 b13f81e3aa5bd8da42813a5513f29ce7 466 Pfam PF00512 His Kinase A (phospho-acceptor) domain 422 451 3.6E-9 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SRM_RS13385 b13f81e3aa5bd8da42813a5513f29ce7 466 Pfam PF13188 PAS domain 287 337 8.9E-9 T 22-04-2016 IPR000014 PAS domain SRM_RS10890 98327cb999daa5b3011d796c4f8cdf2a 472 Gene3D G3DSA:3.40.30.10 319 443 3.4E-14 T 22-04-2016 IPR012336 Thioredoxin-like fold SRM_RS10890 98327cb999daa5b3011d796c4f8cdf2a 472 SUPERFAMILY SSF52833 320 460 3.42E-13 T 22-04-2016 IPR012336 Thioredoxin-like fold SRM_RS14220 1b1baa3ea6795b99d8201fa668e21ae1 237 SUPERFAMILY SSF111304 172 236 5.49E-23 T 22-04-2016 IPR023627 Recombination protein RecR SRM_RS14220 1b1baa3ea6795b99d8201fa668e21ae1 237 Pfam PF02132 RecR protein 40 79 6.5E-13 T 22-04-2016 IPR023628 Recombination protein RecR, C4-type zinc finger SRM_RS14220 1b1baa3ea6795b99d8201fa668e21ae1 237 SUPERFAMILY SSF111304 4 135 2.88E-44 T 22-04-2016 IPR023627 Recombination protein RecR SRM_RS14220 1b1baa3ea6795b99d8201fa668e21ae1 237 ProSitePatterns PS01300 RecR protein signature. 58 79 - T 22-04-2016 IPR015967 Recombination protein RecR, conserved site GO:0006281|GO:0006310 SRM_RS14220 1b1baa3ea6795b99d8201fa668e21ae1 237 Pfam PF13662 Toprim domain 170 209 8.6E-7 T 22-04-2016 IPR006171 Toprim domain SRM_RS14220 1b1baa3ea6795b99d8201fa668e21ae1 237 Pfam PF13662 Toprim domain 81 129 2.4E-12 T 22-04-2016 IPR006171 Toprim domain SRM_RS14220 1b1baa3ea6795b99d8201fa668e21ae1 237 Hamap MF_00017 Recombination protein RecR [recR]. 1 236 88.986 T 22-04-2016 IPR000093 DNA recombination protein RecR GO:0003677|GO:0006281|GO:0006310 SRM_RS14220 1b1baa3ea6795b99d8201fa668e21ae1 237 PANTHER PTHR30446 170 237 2.8E-92 T 22-04-2016 SRM_RS14220 1b1baa3ea6795b99d8201fa668e21ae1 237 PANTHER PTHR30446 2 132 2.8E-92 T 22-04-2016 SRM_RS14220 1b1baa3ea6795b99d8201fa668e21ae1 237 SMART SM00493 81 203 3.1E-8 T 22-04-2016 IPR006171 Toprim domain SRM_RS14220 1b1baa3ea6795b99d8201fa668e21ae1 237 PANTHER PTHR30446:SF0 170 237 2.8E-92 T 22-04-2016 SRM_RS14220 1b1baa3ea6795b99d8201fa668e21ae1 237 PANTHER PTHR30446:SF0 2 132 2.8E-92 T 22-04-2016 SRM_RS10590 dbfe295a6f08db44d72b9e0a830b6e5a 234 Gene3D G3DSA:3.40.1180.10 1 225 7.9E-92 T 22-04-2016 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 SRM_RS10590 dbfe295a6f08db44d72b9e0a830b6e5a 234 Hamap MF_01139 Ditrans,polycis-undecaprenyl-diphosphate synthase ((2E,6E)-farnesyl-diphosphate specific) [uppS]. 1 221 35.313 T 22-04-2016 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 SRM_RS10590 dbfe295a6f08db44d72b9e0a830b6e5a 234 Pfam PF01255 Putative undecaprenyl diphosphate synthase 1 220 1.1E-78 T 22-04-2016 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 SRM_RS10590 dbfe295a6f08db44d72b9e0a830b6e5a 234 ProSitePatterns PS01066 Undecaprenyl pyrophosphate synthase family signature. 166 183 - T 22-04-2016 IPR018520 Di-trans-poly-cis-decaprenylcistransferase-like, conserved site GO:0016765 SRM_RS10590 dbfe295a6f08db44d72b9e0a830b6e5a 234 TIGRFAM TIGR00055 uppS: di-trans,poly-cis-decaprenylcistransferase 1 220 4.6E-80 T 22-04-2016 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 SRM_RS10590 dbfe295a6f08db44d72b9e0a830b6e5a 234 PANTHER PTHR10291 1 233 5.1E-111 T 22-04-2016 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 SRM_RS10590 dbfe295a6f08db44d72b9e0a830b6e5a 234 SUPERFAMILY SSF64005 1 216 4.58E-79 T 22-04-2016 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 SRM_RS03605 885e7f484cfd5427e4e905eda75434a5 786 PANTHER PTHR11070 22 680 1.6E-211 T 22-04-2016 IPR000212 DNA helicase, UvrD/REP type GO:0003677|GO:0004003|GO:0005524 SRM_RS03605 885e7f484cfd5427e4e905eda75434a5 786 Gene3D G3DSA:3.40.50.300 572 661 2.7E-70 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SRM_RS03605 885e7f484cfd5427e4e905eda75434a5 786 Gene3D G3DSA:3.40.50.300 306 408 2.7E-70 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SRM_RS03605 885e7f484cfd5427e4e905eda75434a5 786 Pfam PF00580 UvrD/REP helicase N-terminal domain 29 291 2.6E-75 T 22-04-2016 IPR014016 UvrD-like Helicase, ATP-binding domain GO:0005524 SRM_RS03605 885e7f484cfd5427e4e905eda75434a5 786 Gene3D G3DSA:1.10.486.10 409 560 1.9E-50 T 22-04-2016 SRM_RS03605 885e7f484cfd5427e4e905eda75434a5 786 Pfam PF13361 UvrD-like helicase C-terminal domain 297 636 2.2E-74 T 22-04-2016 IPR014017 UvrD-like DNA helicase, C-terminal GO:0005524|GO:0016787 SRM_RS03605 885e7f484cfd5427e4e905eda75434a5 786 PANTHER PTHR11070:SF7 22 680 1.6E-211 T 22-04-2016 SRM_RS03605 885e7f484cfd5427e4e905eda75434a5 786 SUPERFAMILY SSF52540 23 660 3.87E-177 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SRM_RS03605 885e7f484cfd5427e4e905eda75434a5 786 Gene3D G3DSA:1.10.10.160 133 207 2.7E-24 T 22-04-2016 IPR013986 DExx box DNA helicase domain SRM_RS03605 885e7f484cfd5427e4e905eda75434a5 786 Gene3D G3DSA:3.40.50.300 208 305 6.3E-72 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SRM_RS03605 885e7f484cfd5427e4e905eda75434a5 786 Gene3D G3DSA:3.40.50.300 23 129 6.3E-72 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SRM_RS10575 9d4d5d05fd4e6d144db731042a3a705e 182 Pfam PF03938 Outer membrane protein (OmpH-like) 3 153 1.7E-31 T 22-04-2016 IPR005632 Chaperone protein Skp GO:0051082 SRM_RS10575 9d4d5d05fd4e6d144db731042a3a705e 182 SMART SM00935 1 154 3.9E-35 T 22-04-2016 IPR005632 Chaperone protein Skp GO:0051082 SRM_RS10575 9d4d5d05fd4e6d144db731042a3a705e 182 PANTHER PTHR35089 1 160 5.9E-28 T 22-04-2016 SRM_RS10575 9d4d5d05fd4e6d144db731042a3a705e 182 PANTHER PTHR35089:SF1 1 160 5.9E-28 T 22-04-2016 SRM_RS10575 9d4d5d05fd4e6d144db731042a3a705e 182 Gene3D G3DSA:3.30.910.20 2 44 8.5E-19 T 22-04-2016 SRM_RS10575 9d4d5d05fd4e6d144db731042a3a705e 182 Gene3D G3DSA:3.30.910.20 82 153 8.5E-19 T 22-04-2016 SRM_RS10575 9d4d5d05fd4e6d144db731042a3a705e 182 SUPERFAMILY SSF111384 7 153 2.09E-27 T 22-04-2016 IPR024930 Skp domain SRM_RS11735 5cf3890f56458a6bd7ff4582413804be 514 Gene3D G3DSA:2.30.42.10 433 505 1.3E-8 T 22-04-2016 IPR001478 PDZ domain GO:0005515 SRM_RS11735 5cf3890f56458a6bd7ff4582413804be 514 Gene3D G3DSA:2.30.42.10 294 383 2.9E-26 T 22-04-2016 IPR001478 PDZ domain GO:0005515 SRM_RS11735 5cf3890f56458a6bd7ff4582413804be 514 Gene3D G3DSA:2.40.10.10 181 293 2.2E-45 T 22-04-2016 SRM_RS11735 5cf3890f56458a6bd7ff4582413804be 514 Pfam PF13180 PDZ domain 292 383 2.3E-14 T 22-04-2016 IPR001478 PDZ domain GO:0005515 SRM_RS11735 5cf3890f56458a6bd7ff4582413804be 514 SUPERFAMILY SSF50156 442 506 6.7E-8 T 22-04-2016 IPR001478 PDZ domain GO:0005515 SRM_RS11735 5cf3890f56458a6bd7ff4582413804be 514 PRINTS PR00834 HtrA/DegQ protease family signature 146 166 4.9E-50 T 22-04-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 SRM_RS11735 5cf3890f56458a6bd7ff4582413804be 514 PRINTS PR00834 HtrA/DegQ protease family signature 332 344 4.9E-50 T 22-04-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 SRM_RS11735 5cf3890f56458a6bd7ff4582413804be 514 PRINTS PR00834 HtrA/DegQ protease family signature 125 137 4.9E-50 T 22-04-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 SRM_RS11735 5cf3890f56458a6bd7ff4582413804be 514 PRINTS PR00834 HtrA/DegQ protease family signature 224 241 4.9E-50 T 22-04-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 SRM_RS11735 5cf3890f56458a6bd7ff4582413804be 514 PRINTS PR00834 HtrA/DegQ protease family signature 246 263 4.9E-50 T 22-04-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 SRM_RS11735 5cf3890f56458a6bd7ff4582413804be 514 PRINTS PR00834 HtrA/DegQ protease family signature 186 210 4.9E-50 T 22-04-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 SRM_RS11735 5cf3890f56458a6bd7ff4582413804be 514 Pfam PF13365 Trypsin-like peptidase domain 116 253 1.5E-35 T 22-04-2016 SRM_RS11735 5cf3890f56458a6bd7ff4582413804be 514 PANTHER PTHR22939:SF79 80 383 1.1E-110 T 22-04-2016 SRM_RS11735 5cf3890f56458a6bd7ff4582413804be 514 SUPERFAMILY SSF50494 74 301 1.83E-60 T 22-04-2016 IPR009003 Peptidase S1, PA clan SRM_RS11735 5cf3890f56458a6bd7ff4582413804be 514 SUPERFAMILY SSF50156 276 382 6.84E-21 T 22-04-2016 IPR001478 PDZ domain GO:0005515 SRM_RS11735 5cf3890f56458a6bd7ff4582413804be 514 Gene3D G3DSA:2.40.10.10 79 180 2.9E-33 T 22-04-2016 SRM_RS11735 5cf3890f56458a6bd7ff4582413804be 514 SMART SM00228 292 374 1.2E-11 T 22-04-2016 IPR001478 PDZ domain GO:0005515 SRM_RS11735 5cf3890f56458a6bd7ff4582413804be 514 SMART SM00228 377 505 0.0046 T 22-04-2016 IPR001478 PDZ domain GO:0005515 SRM_RS11735 5cf3890f56458a6bd7ff4582413804be 514 PANTHER PTHR22939 80 383 1.1E-110 T 22-04-2016 SRM_RS13055 f076aa0d55f3a27be6a5fc00a3339eb6 875 Gene3D G3DSA:2.170.130.10 196 298 9.7E-9 T 22-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 SRM_RS13055 f076aa0d55f3a27be6a5fc00a3339eb6 875 SUPERFAMILY SSF56935 190 859 2.45E-62 T 22-04-2016 SRM_RS13055 f076aa0d55f3a27be6a5fc00a3339eb6 875 Gene3D G3DSA:2.60.40.1120 97 195 2.0E-13 T 22-04-2016 IPR014766 Carboxypeptidase, regulatory domain SRM_RS13055 f076aa0d55f3a27be6a5fc00a3339eb6 875 Pfam PF13620 Carboxypeptidase regulatory-like domain 97 167 3.6E-13 T 22-04-2016 SRM_RS13055 f076aa0d55f3a27be6a5fc00a3339eb6 875 Gene3D G3DSA:2.40.170.20 299 859 1.0E-35 T 22-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 SRM_RS13055 f076aa0d55f3a27be6a5fc00a3339eb6 875 PANTHER PTHR30069 481 719 7.0E-14 T 22-04-2016 SRM_RS13055 f076aa0d55f3a27be6a5fc00a3339eb6 875 PANTHER PTHR30069 97 422 7.0E-14 T 22-04-2016 SRM_RS13055 f076aa0d55f3a27be6a5fc00a3339eb6 875 SUPERFAMILY SSF49464 95 165 1.92E-12 T 22-04-2016 IPR008969 Carboxypeptidase-like, regulatory domain SRM_RS13055 f076aa0d55f3a27be6a5fc00a3339eb6 875 Pfam PF14905 Outer membrane protein beta-barrel family 461 857 1.9E-86 T 22-04-2016 SRM_RS13200 7639acb34b62da2475d8a8d5a9848277 410 Pfam PF13387 Domain of unknown function (DUF4105) 40 174 4.5E-26 T 22-04-2016 IPR025178 Domain of unknown function DUF4105 SRM_RS12665 46d4e9fe28a0d21c40c3325d82445c42 561 Pfam PF01039 Carboxyl transferase domain 72 559 1.2E-190 T 22-04-2016 IPR000022 Carboxyl transferase KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 SRM_RS12665 46d4e9fe28a0d21c40c3325d82445c42 561 Gene3D G3DSA:3.90.226.10 311 561 1.1E-99 T 22-04-2016 IPR029045 ClpP/crotonase-like domain SRM_RS12665 46d4e9fe28a0d21c40c3325d82445c42 561 SUPERFAMILY SSF52096 263 540 5.27E-90 T 22-04-2016 IPR029045 ClpP/crotonase-like domain SRM_RS12665 46d4e9fe28a0d21c40c3325d82445c42 561 PANTHER PTHR22855 48 561 0.0 T 22-04-2016 SRM_RS12665 46d4e9fe28a0d21c40c3325d82445c42 561 SUPERFAMILY SSF52096 50 300 2.56E-78 T 22-04-2016 IPR029045 ClpP/crotonase-like domain SRM_RS12665 46d4e9fe28a0d21c40c3325d82445c42 561 PANTHER PTHR22855:SF14 48 561 0.0 T 22-04-2016 SRM_RS12665 46d4e9fe28a0d21c40c3325d82445c42 561 Gene3D G3DSA:3.90.226.10 39 301 8.0E-82 T 22-04-2016 IPR029045 ClpP/crotonase-like domain SRM_RS13280 2132e0bc099e1baee1eb0c9f16306b5c 530 PANTHER PTHR30031 1 528 0.0 T 22-04-2016 SRM_RS13280 2132e0bc099e1baee1eb0c9f16306b5c 530 Hamap MF_00453 Phosphoenolpyruvate carboxykinase [ATP] [pckA]. 10 527 49.948 T 22-04-2016 IPR001272 Phosphoenolpyruvate carboxykinase, ATP-utilising GO:0004612|GO:0005524|GO:0006094 KEGG: 00010+4.1.1.49|KEGG: 00020+4.1.1.49|KEGG: 00620+4.1.1.49|KEGG: 00710+4.1.1.49|MetaCyc: PWY-561|MetaCyc: PWY-7117|UniPathway: UPA00138 SRM_RS13280 2132e0bc099e1baee1eb0c9f16306b5c 530 Gene3D G3DSA:3.40.449.10 17 210 8.3E-87 T 22-04-2016 IPR008210 Phosphoenolpyruvate carboxykinase, N-terminal GO:0004611|GO:0006094|GO:0017076 Reactome: REACT_474|UniPathway: UPA00138 SRM_RS13280 2132e0bc099e1baee1eb0c9f16306b5c 530 PANTHER PTHR30031:SF0 1 528 0.0 T 22-04-2016 SRM_RS13280 2132e0bc099e1baee1eb0c9f16306b5c 530 SUPERFAMILY SSF53795 212 527 6.41E-136 T 22-04-2016 SRM_RS13280 2132e0bc099e1baee1eb0c9f16306b5c 530 ProSitePatterns PS00532 Phosphoenolpyruvate carboxykinase (ATP) signature. 249 264 - T 22-04-2016 IPR015994 Phosphoenolpyruvate carboxykinase (ATP), conserved site GO:0004612|GO:0005524|GO:0006094 KEGG: 00010+4.1.1.49|KEGG: 00020+4.1.1.49|KEGG: 00620+4.1.1.49|KEGG: 00710+4.1.1.49|MetaCyc: PWY-561|MetaCyc: PWY-7117|UniPathway: UPA00138 SRM_RS13280 2132e0bc099e1baee1eb0c9f16306b5c 530 Gene3D G3DSA:3.90.228.20 212 274 1.1E-122 T 22-04-2016 IPR013035 Phosphoenolpyruvate carboxykinase, C-terminal GO:0004611|GO:0006094|GO:0017076 Reactome: REACT_474|UniPathway: UPA00138 SRM_RS13280 2132e0bc099e1baee1eb0c9f16306b5c 530 Gene3D G3DSA:3.90.228.20 335 526 1.1E-122 T 22-04-2016 IPR013035 Phosphoenolpyruvate carboxykinase, C-terminal GO:0004611|GO:0006094|GO:0017076 Reactome: REACT_474|UniPathway: UPA00138 SRM_RS13280 2132e0bc099e1baee1eb0c9f16306b5c 530 PIRSF PIRSF006294 4 527 4.1E-247 T 22-04-2016 IPR001272 Phosphoenolpyruvate carboxykinase, ATP-utilising GO:0004612|GO:0005524|GO:0006094 KEGG: 00010+4.1.1.49|KEGG: 00020+4.1.1.49|KEGG: 00620+4.1.1.49|KEGG: 00710+4.1.1.49|MetaCyc: PWY-561|MetaCyc: PWY-7117|UniPathway: UPA00138 SRM_RS13280 2132e0bc099e1baee1eb0c9f16306b5c 530 TIGRFAM TIGR00224 pckA: phosphoenolpyruvate carboxykinase (ATP) 15 527 4.9E-235 T 22-04-2016 IPR001272 Phosphoenolpyruvate carboxykinase, ATP-utilising GO:0004612|GO:0005524|GO:0006094 KEGG: 00010+4.1.1.49|KEGG: 00020+4.1.1.49|KEGG: 00620+4.1.1.49|KEGG: 00710+4.1.1.49|MetaCyc: PWY-561|MetaCyc: PWY-7117|UniPathway: UPA00138 SRM_RS13280 2132e0bc099e1baee1eb0c9f16306b5c 530 Pfam PF01293 Phosphoenolpyruvate carboxykinase 16 479 9.9E-223 T 22-04-2016 IPR001272 Phosphoenolpyruvate carboxykinase, ATP-utilising GO:0004612|GO:0005524|GO:0006094 KEGG: 00010+4.1.1.49|KEGG: 00020+4.1.1.49|KEGG: 00620+4.1.1.49|KEGG: 00710+4.1.1.49|MetaCyc: PWY-561|MetaCyc: PWY-7117|UniPathway: UPA00138 SRM_RS13280 2132e0bc099e1baee1eb0c9f16306b5c 530 SUPERFAMILY SSF68923 3 211 1.31E-74 T 22-04-2016 IPR008210 Phosphoenolpyruvate carboxykinase, N-terminal GO:0004611|GO:0006094|GO:0017076 Reactome: REACT_474|UniPathway: UPA00138 SRM_RS08525 4037ef4867242473614366bac51158e8 544 PANTHER PTHR11699:SF216 75 540 1.2E-168 T 22-04-2016 SRM_RS08525 4037ef4867242473614366bac51158e8 544 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 310 321 - T 22-04-2016 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0008152|GO:0016491|GO:0055114 SRM_RS08525 4037ef4867242473614366bac51158e8 544 Pfam PF00171 Aldehyde dehydrogenase family 72 509 1.2E-95 T 22-04-2016 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 SRM_RS08525 4037ef4867242473614366bac51158e8 544 Gene3D G3DSA:3.40.309.10 298 489 1.0E-59 T 22-04-2016 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0008152|GO:0016491|GO:0016620|GO:0055114 SRM_RS08525 4037ef4867242473614366bac51158e8 544 PIRSF PIRSF036492 59 542 5.7E-162 T 22-04-2016 IPR012394 Aldehyde dehydrogenase NAD(P)-dependent GO:0004030|GO:0006081|GO:0055114 SRM_RS08525 4037ef4867242473614366bac51158e8 544 SUPERFAMILY SSF53720 67 511 3.93E-122 T 22-04-2016 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 SRM_RS08525 4037ef4867242473614366bac51158e8 544 PANTHER PTHR11699 75 540 1.2E-168 T 22-04-2016 SRM_RS08525 4037ef4867242473614366bac51158e8 544 Gene3D G3DSA:3.40.605.10 72 297 3.0E-58 T 22-04-2016 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 SRM_RS08525 4037ef4867242473614366bac51158e8 544 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 282 289 - T 22-04-2016 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0008152|GO:0016491|GO:0055114 SRM_RS05145 7f52f8e5b107b110bd69de64f96128f2 299 Gene3D G3DSA:3.40.50.620 151 293 1.4E-31 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold SRM_RS05145 7f52f8e5b107b110bd69de64f96128f2 299 Gene3D G3DSA:3.40.50.620 3 148 2.7E-29 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold SRM_RS05145 7f52f8e5b107b110bd69de64f96128f2 299 PANTHER PTHR31964 141 294 6.9E-23 T 22-04-2016 SRM_RS05145 7f52f8e5b107b110bd69de64f96128f2 299 PANTHER PTHR31964:SF42 141 294 6.9E-23 T 22-04-2016 SRM_RS05145 7f52f8e5b107b110bd69de64f96128f2 299 SUPERFAMILY SSF52402 6 148 1.26E-27 T 22-04-2016 SRM_RS05145 7f52f8e5b107b110bd69de64f96128f2 299 SUPERFAMILY SSF52402 157 293 1.93E-29 T 22-04-2016 SRM_RS05145 7f52f8e5b107b110bd69de64f96128f2 299 Pfam PF00582 Universal stress protein family 156 293 5.4E-26 T 22-04-2016 IPR006016 UspA GO:0006950 SRM_RS05145 7f52f8e5b107b110bd69de64f96128f2 299 Pfam PF00582 Universal stress protein family 7 143 9.7E-25 T 22-04-2016 IPR006016 UspA GO:0006950 SRM_RS05145 7f52f8e5b107b110bd69de64f96128f2 299 PRINTS PR01438 Universal stress protein signature 253 265 4.0E-12 T 22-04-2016 IPR006015 Universal stress protein A SRM_RS05145 7f52f8e5b107b110bd69de64f96128f2 299 PRINTS PR01438 Universal stress protein signature 271 293 4.0E-12 T 22-04-2016 IPR006015 Universal stress protein A SRM_RS05145 7f52f8e5b107b110bd69de64f96128f2 299 PRINTS PR01438 Universal stress protein signature 4 22 4.0E-12 T 22-04-2016 IPR006015 Universal stress protein A SRM_RS02780 20afea2fe18513ea19557cf1d63859a9 304 PANTHER PTHR12862 4 295 4.6E-49 T 22-04-2016 SRM_RS02780 20afea2fe18513ea19557cf1d63859a9 304 SUPERFAMILY SSF53067 5 117 7.77E-9 T 22-04-2016 SRM_RS02780 20afea2fe18513ea19557cf1d63859a9 304 Pfam PF01869 BadF/BadG/BcrA/BcrD ATPase family 8 295 1.4E-22 T 22-04-2016 IPR002731 ATPase, BadF/BadG/BcrA/BcrD type SRM_RS02780 20afea2fe18513ea19557cf1d63859a9 304 SUPERFAMILY SSF53067 120 302 1.69E-38 T 22-04-2016 SRM_RS09775 ad2450cede4edbf232abab920174f873 794 Pfam PF13244 Domain of unknown function (DUF4040) 609 670 4.0E-14 T 22-04-2016 IPR025383 Domain of unknown function DUF4040 SRM_RS09775 ad2450cede4edbf232abab920174f873 794 Pfam PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus 61 114 7.9E-15 T 22-04-2016 IPR001516 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminal SRM_RS09775 ad2450cede4edbf232abab920174f873 794 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 216 237 5.6E-38 T 22-04-2016 SRM_RS09775 ad2450cede4edbf232abab920174f873 794 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 306 318 5.6E-38 T 22-04-2016 SRM_RS09775 ad2450cede4edbf232abab920174f873 794 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 238 264 5.6E-38 T 22-04-2016 SRM_RS09775 ad2450cede4edbf232abab920174f873 794 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 103 123 5.6E-38 T 22-04-2016 SRM_RS09775 ad2450cede4edbf232abab920174f873 794 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 75 100 5.6E-38 T 22-04-2016 SRM_RS09775 ad2450cede4edbf232abab920174f873 794 PANTHER PTHR22773 22 578 1.8E-216 T 22-04-2016 SRM_RS09775 ad2450cede4edbf232abab920174f873 794 PANTHER PTHR22773:SF85 22 578 1.8E-216 T 22-04-2016 SRM_RS09775 ad2450cede4edbf232abab920174f873 794 Pfam PF00361 Proton-conducting membrane transporter 126 412 5.0E-67 T 22-04-2016 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit Reactome: REACT_6305 SRM_RS09080 4cd5f5df4ba02ab7ee7163cd7e7e93d3 268 Pfam PF00977 Histidine biosynthesis protein 6 237 1.7E-88 T 22-04-2016 IPR006062 Histidine biosynthesis GO:0000105 SRM_RS09080 4cd5f5df4ba02ab7ee7163cd7e7e93d3 268 Hamap MF_01013 Imidazole glycerol phosphate synthase subunit HisF [hisF]. 2 254 48.867 T 22-04-2016 IPR004651 Histidine biosynthesis, HisF GO:0000105|GO:0000107|GO:0005737 UniPathway: UPA00031 SRM_RS09080 4cd5f5df4ba02ab7ee7163cd7e7e93d3 268 SUPERFAMILY SSF51366 3 254 1.81E-83 T 22-04-2016 IPR011060 Ribulose-phosphate binding barrel GO:0003824|GO:0008152 SRM_RS09080 4cd5f5df4ba02ab7ee7163cd7e7e93d3 268 PANTHER PTHR21235:SF2 1 257 4.3E-125 T 22-04-2016 SRM_RS09080 4cd5f5df4ba02ab7ee7163cd7e7e93d3 268 Gene3D G3DSA:3.20.20.70 5 255 9.3E-107 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 SRM_RS09080 4cd5f5df4ba02ab7ee7163cd7e7e93d3 268 TIGRFAM TIGR00735 hisF: imidazoleglycerol phosphate synthase, cyclase subunit 3 254 2.0E-113 T 22-04-2016 IPR004651 Histidine biosynthesis, HisF GO:0000105|GO:0000107|GO:0005737 UniPathway: UPA00031 SRM_RS09080 4cd5f5df4ba02ab7ee7163cd7e7e93d3 268 PANTHER PTHR21235 1 257 4.3E-125 T 22-04-2016 SRM_RS09460 c50a13354735dae4f8bf3890cd71fb38 926 SUPERFAMILY SSF56672 519 926 5.34E-147 T 22-04-2016 SRM_RS09460 c50a13354735dae4f8bf3890cd71fb38 926 Pfam PF01367 5'-3' exonuclease, C-terminal SAM fold 183 277 1.8E-30 T 22-04-2016 IPR020045 5'-3' exonuclease, C-terminal domain GO:0003677|GO:0003824 SRM_RS09460 c50a13354735dae4f8bf3890cd71fb38 926 TIGRFAM TIGR00593 pola: DNA polymerase I 13 926 1.7E-290 T 22-04-2016 IPR018320 DNA polymerase 1 GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 SRM_RS09460 c50a13354735dae4f8bf3890cd71fb38 926 Gene3D G3DSA:3.40.50.1010 12 192 1.6E-65 T 22-04-2016 IPR029060 PIN domain-like SRM_RS09460 c50a13354735dae4f8bf3890cd71fb38 926 Pfam PF00476 DNA polymerase family A 549 923 3.5E-142 T 22-04-2016 IPR001098 DNA-directed DNA polymerase, family A, palm domain GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 SRM_RS09460 c50a13354735dae4f8bf3890cd71fb38 926 Gene3D G3DSA:1.10.150.20 709 815 3.3E-30 T 22-04-2016 SRM_RS09460 c50a13354735dae4f8bf3890cd71fb38 926 SUPERFAMILY SSF53098 338 516 1.99E-40 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 SRM_RS09460 c50a13354735dae4f8bf3890cd71fb38 926 Gene3D G3DSA:1.20.1060.10 540 660 9.1E-38 T 22-04-2016 SRM_RS09460 c50a13354735dae4f8bf3890cd71fb38 926 PANTHER PTHR10133 1 293 0.0 T 22-04-2016 SRM_RS09460 c50a13354735dae4f8bf3890cd71fb38 926 PANTHER PTHR10133 323 925 0.0 T 22-04-2016 SRM_RS09460 c50a13354735dae4f8bf3890cd71fb38 926 Gene3D G3DSA:3.30.420.10 334 539 9.5E-60 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 SRM_RS09460 c50a13354735dae4f8bf3890cd71fb38 926 SUPERFAMILY SSF47807 182 296 6.43E-32 T 22-04-2016 IPR020045 5'-3' exonuclease, C-terminal domain GO:0003677|GO:0003824 SRM_RS09460 c50a13354735dae4f8bf3890cd71fb38 926 Gene3D G3DSA:3.30.70.370 816 926 3.7E-64 T 22-04-2016 SRM_RS09460 c50a13354735dae4f8bf3890cd71fb38 926 Gene3D G3DSA:3.30.70.370 661 708 3.7E-64 T 22-04-2016 SRM_RS09460 c50a13354735dae4f8bf3890cd71fb38 926 SUPERFAMILY SSF88723 11 164 3.64E-52 T 22-04-2016 IPR029060 PIN domain-like SRM_RS09460 c50a13354735dae4f8bf3890cd71fb38 926 ProSitePatterns PS00447 DNA polymerase family A signature. 751 770 - T 22-04-2016 IPR019760 DNA-directed DNA polymerase, family A, conserved site GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 SRM_RS09460 c50a13354735dae4f8bf3890cd71fb38 926 SMART SM00474 335 515 2.4E-30 T 22-04-2016 IPR002562 3'-5' exonuclease domain GO:0003676|GO:0006139|GO:0008408 SRM_RS09460 c50a13354735dae4f8bf3890cd71fb38 926 PANTHER PTHR10133:SF27 1 293 0.0 T 22-04-2016 SRM_RS09460 c50a13354735dae4f8bf3890cd71fb38 926 PANTHER PTHR10133:SF27 323 925 0.0 T 22-04-2016 SRM_RS09460 c50a13354735dae4f8bf3890cd71fb38 926 SMART SM00475 10 273 2.1E-127 T 22-04-2016 IPR002421 5'-3' exonuclease, N-terminal GO:0003677 SRM_RS09460 c50a13354735dae4f8bf3890cd71fb38 926 Pfam PF02739 5'-3' exonuclease, N-terminal resolvase-like domain 13 180 1.1E-50 T 22-04-2016 IPR020046 5'-3' exonuclease, alpha-helical arch, N-terminal GO:0003677 SRM_RS09460 c50a13354735dae4f8bf3890cd71fb38 926 Gene3D G3DSA:1.10.150.20 193 255 1.1E-31 T 22-04-2016 SRM_RS09460 c50a13354735dae4f8bf3890cd71fb38 926 SMART SM00279 184 219 4.8E-17 T 22-04-2016 IPR008918 Helix-hairpin-helix motif, class 2 GO:0003677|GO:0003824 SRM_RS09460 c50a13354735dae4f8bf3890cd71fb38 926 PRINTS PR00868 DNA-polymerase family A (pol I) signature 675 690 7.8E-68 T 22-04-2016 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 SRM_RS09460 c50a13354735dae4f8bf3890cd71fb38 926 PRINTS PR00868 DNA-polymerase family A (pol I) signature 788 799 7.8E-68 T 22-04-2016 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 SRM_RS09460 c50a13354735dae4f8bf3890cd71fb38 926 PRINTS PR00868 DNA-polymerase family A (pol I) signature 872 885 7.8E-68 T 22-04-2016 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 SRM_RS09460 c50a13354735dae4f8bf3890cd71fb38 926 PRINTS PR00868 DNA-polymerase family A (pol I) signature 842 858 7.8E-68 T 22-04-2016 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 SRM_RS09460 c50a13354735dae4f8bf3890cd71fb38 926 PRINTS PR00868 DNA-polymerase family A (pol I) signature 751 776 7.8E-68 T 22-04-2016 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 SRM_RS09460 c50a13354735dae4f8bf3890cd71fb38 926 PRINTS PR00868 DNA-polymerase family A (pol I) signature 727 740 7.8E-68 T 22-04-2016 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 SRM_RS09460 c50a13354735dae4f8bf3890cd71fb38 926 PRINTS PR00868 DNA-polymerase family A (pol I) signature 652 674 7.8E-68 T 22-04-2016 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 SRM_RS09460 c50a13354735dae4f8bf3890cd71fb38 926 PRINTS PR00868 DNA-polymerase family A (pol I) signature 810 821 7.8E-68 T 22-04-2016 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 SRM_RS09460 c50a13354735dae4f8bf3890cd71fb38 926 PRINTS PR00868 DNA-polymerase family A (pol I) signature 697 720 7.8E-68 T 22-04-2016 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 SRM_RS09460 c50a13354735dae4f8bf3890cd71fb38 926 SMART SM00482 683 889 1.4E-103 T 22-04-2016 IPR001098 DNA-directed DNA polymerase, family A, palm domain GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 SRM_RS09460 c50a13354735dae4f8bf3890cd71fb38 926 Pfam PF01612 3'-5' exonuclease 335 515 1.1E-29 T 22-04-2016 IPR002562 3'-5' exonuclease domain GO:0003676|GO:0006139|GO:0008408 SRM_RS05895 b34c671f046adc3418e7c53706f08427 401 Gene3D G3DSA:3.10.580.10 181 315 7.5E-15 T 22-04-2016 SRM_RS05895 b34c671f046adc3418e7c53706f08427 401 PANTHER PTHR22777 1 345 2.1E-137 T 22-04-2016 SRM_RS05895 b34c671f046adc3418e7c53706f08427 401 Pfam PF01595 Domain of unknown function DUF21 7 179 2.2E-29 T 22-04-2016 IPR002550 Domain of unknown function DUF21 SRM_RS05895 b34c671f046adc3418e7c53706f08427 401 Pfam PF00571 CBS domain 263 314 6.7E-6 T 22-04-2016 IPR000644 CBS domain SRM_RS05895 b34c671f046adc3418e7c53706f08427 401 PANTHER PTHR22777:SF4 1 345 2.1E-137 T 22-04-2016 SRM_RS05895 b34c671f046adc3418e7c53706f08427 401 SUPERFAMILY SSF54631 182 315 1.89E-25 T 22-04-2016 SRM_RS02560 f5c5b4cef927f930c975bb9deeeba5e5 711 ProSitePatterns PS01229 Hypothetical cof family signature 2. 599 621 - T 22-04-2016 SRM_RS02560 f5c5b4cef927f930c975bb9deeeba5e5 711 PANTHER PTHR24093:SF50 35 708 5.2E-139 T 22-04-2016 SRM_RS02560 f5c5b4cef927f930c975bb9deeeba5e5 711 SUPERFAMILY SSF81653 192 289 3.14E-23 T 22-04-2016 SRM_RS02560 f5c5b4cef927f930c975bb9deeeba5e5 711 TIGRFAM TIGR01511 ATPase-IB1_Cu: copper-translocating P-type ATPase 111 702 9.6E-122 T 22-04-2016 SRM_RS02560 f5c5b4cef927f930c975bb9deeeba5e5 711 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 388 402 2.0E-19 T 22-04-2016 SRM_RS02560 f5c5b4cef927f930c975bb9deeeba5e5 711 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 622 634 2.0E-19 T 22-04-2016 SRM_RS02560 f5c5b4cef927f930c975bb9deeeba5e5 711 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 547 557 2.0E-19 T 22-04-2016 SRM_RS02560 f5c5b4cef927f930c975bb9deeeba5e5 711 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 599 618 2.0E-19 T 22-04-2016 SRM_RS02560 f5c5b4cef927f930c975bb9deeeba5e5 711 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 239 253 2.0E-19 T 22-04-2016 SRM_RS02560 f5c5b4cef927f930c975bb9deeeba5e5 711 TIGRFAM TIGR01525 ATPase-IB_hvy: heavy metal translocating P-type ATPase 130 701 2.8E-147 T 22-04-2016 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 SRM_RS02560 f5c5b4cef927f930c975bb9deeeba5e5 711 Gene3D G3DSA:2.70.150.10 144 289 1.2E-21 T 22-04-2016 IPR008250 P-type ATPase, A domain GO:0000166|GO:0046872 SRM_RS02560 f5c5b4cef927f930c975bb9deeeba5e5 711 SUPERFAMILY SSF81665 290 382 6.67E-10 T 22-04-2016 SRM_RS02560 f5c5b4cef927f930c975bb9deeeba5e5 711 SUPERFAMILY SSF81665 648 688 6.67E-10 T 22-04-2016 SRM_RS02560 f5c5b4cef927f930c975bb9deeeba5e5 711 PANTHER PTHR24093 35 708 5.2E-139 T 22-04-2016 SRM_RS02560 f5c5b4cef927f930c975bb9deeeba5e5 711 Gene3D G3DSA:3.40.1110.10 419 522 2.9E-14 T 22-04-2016 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 SRM_RS02560 f5c5b4cef927f930c975bb9deeeba5e5 711 Gene3D G3DSA:3.40.50.1000 363 397 3.9E-31 T 22-04-2016 IPR023214 HAD-like domain SRM_RS02560 f5c5b4cef927f930c975bb9deeeba5e5 711 Gene3D G3DSA:3.40.50.1000 523 667 3.9E-31 T 22-04-2016 IPR023214 HAD-like domain SRM_RS02560 f5c5b4cef927f930c975bb9deeeba5e5 711 Pfam PF00702 haloacid dehalogenase-like hydrolase 385 613 8.4E-29 T 22-04-2016 SRM_RS02560 f5c5b4cef927f930c975bb9deeeba5e5 711 Pfam PF00122 E1-E2 ATPase 161 377 3.4E-53 T 22-04-2016 IPR008250 P-type ATPase, A domain GO:0000166|GO:0046872 SRM_RS02560 f5c5b4cef927f930c975bb9deeeba5e5 711 SUPERFAMILY SSF56784 453 698 4.65E-36 T 22-04-2016 IPR023214 HAD-like domain SRM_RS02560 f5c5b4cef927f930c975bb9deeeba5e5 711 SUPERFAMILY SSF56784 387 407 4.65E-36 T 22-04-2016 IPR023214 HAD-like domain SRM_RS02560 f5c5b4cef927f930c975bb9deeeba5e5 711 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 502 677 8.2E-30 T 22-04-2016 IPR001757 P-type ATPase GO:0016021 SRM_RS02560 f5c5b4cef927f930c975bb9deeeba5e5 711 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 163 397 3.9E-32 T 22-04-2016 IPR001757 P-type ATPase GO:0016021 SRM_RS08040 ec6b182c6e9b054468095084b87e6d5a 371 Pfam PF00072 Response regulator receiver domain 6 116 3.9E-27 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SRM_RS08040 ec6b182c6e9b054468095084b87e6d5a 371 PANTHER PTHR26402 4 149 6.9E-42 T 22-04-2016 SRM_RS08040 ec6b182c6e9b054468095084b87e6d5a 371 SUPERFAMILY SSF81606 165 317 4.18E-9 T 22-04-2016 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04660+3.1.3.16 SRM_RS08040 ec6b182c6e9b054468095084b87e6d5a 371 SUPERFAMILY SSF52172 3 128 2.13E-40 T 22-04-2016 IPR011006 CheY-like superfamily SRM_RS08040 ec6b182c6e9b054468095084b87e6d5a 371 Gene3D G3DSA:3.40.50.2300 3 127 2.2E-41 T 22-04-2016 SRM_RS08040 ec6b182c6e9b054468095084b87e6d5a 371 SMART SM00331 145 368 1.0E-27 T 22-04-2016 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04660+3.1.3.16 SRM_RS08040 ec6b182c6e9b054468095084b87e6d5a 371 Pfam PF07228 Stage II sporulation protein E (SpoIIE) 177 368 6.1E-37 T 22-04-2016 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04660+3.1.3.16 SRM_RS08040 ec6b182c6e9b054468095084b87e6d5a 371 SMART SM00448 4 116 2.5E-41 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SRM_RS00840 a3d9e07d567818f1bc60fe1f6860121f 54 SUPERFAMILY SSF57829 3 54 4.03E-17 T 22-04-2016 IPR011332 Zinc-binding ribosomal protein GO:0006412 SRM_RS00840 a3d9e07d567818f1bc60fe1f6860121f 54 TIGRFAM TIGR01023 rpmG_bact: ribosomal protein bL33 2 54 7.9E-19 T 22-04-2016 IPR001705 Ribosomal protein L33 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SRM_RS00840 a3d9e07d567818f1bc60fe1f6860121f 54 Hamap MF_00294 50S ribosomal protein L33 [rpmG]. 5 54 15.576 T 22-04-2016 IPR001705 Ribosomal protein L33 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SRM_RS00840 a3d9e07d567818f1bc60fe1f6860121f 54 Pfam PF00471 Ribosomal protein L33 7 54 3.0E-21 T 22-04-2016 IPR001705 Ribosomal protein L33 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SRM_RS10360 04852f88f86af638d515d3431f7827cb 188 PANTHER PTHR35335:SF1 1 184 7.0E-39 T 22-04-2016 SRM_RS10360 04852f88f86af638d515d3431f7827cb 188 Pfam PF04186 FxsA cytoplasmic membrane protein 7 115 4.1E-34 T 22-04-2016 IPR007313 FxsA cytoplasmic membrane protein GO:0016020 SRM_RS10360 04852f88f86af638d515d3431f7827cb 188 PANTHER PTHR35335 1 184 7.0E-39 T 22-04-2016 SRM_RS08445 7e51853575f6927c3d03d3dd621114f9 314 PANTHER PTHR31284 117 250 1.4E-47 T 22-04-2016 SRM_RS08445 7e51853575f6927c3d03d3dd621114f9 314 PANTHER PTHR31284 38 101 1.4E-47 T 22-04-2016 SRM_RS08445 7e51853575f6927c3d03d3dd621114f9 314 SUPERFAMILY SSF56784 89 288 2.0E-44 T 22-04-2016 IPR023214 HAD-like domain SRM_RS08445 7e51853575f6927c3d03d3dd621114f9 314 PANTHER PTHR31284:SF10 268 284 1.4E-47 T 22-04-2016 SRM_RS08445 7e51853575f6927c3d03d3dd621114f9 314 Pfam PF03767 HAD superfamily, subfamily IIIB (Acid phosphatase) 68 284 1.6E-42 T 22-04-2016 IPR005519 Acid phosphatase, class B-like SRM_RS08445 7e51853575f6927c3d03d3dd621114f9 314 PIRSF PIRSF019271 18 314 2.8E-68 T 22-04-2016 IPR006423 5-nucleotidase lipoprotein e(P4) GO:0009279 SRM_RS08445 7e51853575f6927c3d03d3dd621114f9 314 PANTHER PTHR31284 268 284 1.4E-47 T 22-04-2016 SRM_RS08445 7e51853575f6927c3d03d3dd621114f9 314 Gene3D G3DSA:3.40.50.1000 66 288 5.0E-60 T 22-04-2016 IPR023214 HAD-like domain SRM_RS08445 7e51853575f6927c3d03d3dd621114f9 314 PANTHER PTHR31284:SF10 117 250 1.4E-47 T 22-04-2016 SRM_RS08445 7e51853575f6927c3d03d3dd621114f9 314 PANTHER PTHR31284:SF10 38 101 1.4E-47 T 22-04-2016 SRM_RS09385 949f76d65080559b63cad908e1136af3 379 SUPERFAMILY SSF51246 309 378 4.79E-16 T 22-04-2016 IPR011054 Rudiment single hybrid motif SRM_RS09385 949f76d65080559b63cad908e1136af3 379 Pfam PF02222 ATP-grasp domain 112 282 4.9E-49 T 22-04-2016 IPR003135 ATP-grasp fold, ATP-dependent carboxylate-amine ligase-type UniPathway: UPA00074 SRM_RS09385 949f76d65080559b63cad908e1136af3 379 Gene3D G3DSA:3.30.1490.20 118 181 7.1E-13 T 22-04-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 SRM_RS09385 949f76d65080559b63cad908e1136af3 379 PANTHER PTHR11609:SF5 1 369 1.0E-131 T 22-04-2016 SRM_RS09385 949f76d65080559b63cad908e1136af3 379 SUPERFAMILY SSF56059 103 302 4.95E-58 T 22-04-2016 SRM_RS09385 949f76d65080559b63cad908e1136af3 379 PANTHER PTHR11609 1 369 1.0E-131 T 22-04-2016 SRM_RS09385 949f76d65080559b63cad908e1136af3 379 TIGRFAM TIGR01161 purK: phosphoribosylaminoimidazole carboxylase, ATPase subunit 7 367 1.1E-106 T 22-04-2016 IPR005875 Phosphoribosylaminoimidazole carboxylase, ATPase subunit GO:0004638|GO:0006189 SRM_RS09385 949f76d65080559b63cad908e1136af3 379 Hamap MF_01928 N5-carboxyaminoimidazole ribonucleotide synthase [purK]. 7 363 38.279 T 22-04-2016 IPR005875 Phosphoribosylaminoimidazole carboxylase, ATPase subunit GO:0004638|GO:0006189 SRM_RS09385 949f76d65080559b63cad908e1136af3 379 SUPERFAMILY SSF52440 4 99 5.47E-17 T 22-04-2016 IPR016185 Pre-ATP-grasp domain SRM_RS09385 949f76d65080559b63cad908e1136af3 379 Gene3D G3DSA:3.30.470.20 182 377 6.5E-67 T 22-04-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 SRM_RS09385 949f76d65080559b63cad908e1136af3 379 Gene3D G3DSA:3.40.50.20 6 112 2.2E-22 T 22-04-2016 IPR016185 Pre-ATP-grasp domain SRM_RS04510 785153859166e405b644e76871fa3031 590 Pfam PF00128 Alpha amylase, catalytic domain 125 210 5.1E-18 T 22-04-2016 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 SRM_RS04510 785153859166e405b644e76871fa3031 590 PANTHER PTHR10357 9 315 1.4E-99 T 22-04-2016 IPR015902 Glycoside hydrolase, family 13 GO:0003824 SRM_RS04510 785153859166e405b644e76871fa3031 590 PANTHER PTHR10357 482 540 1.4E-99 T 22-04-2016 IPR015902 Glycoside hydrolase, family 13 GO:0003824 SRM_RS04510 785153859166e405b644e76871fa3031 590 PANTHER PTHR10357 336 460 1.4E-99 T 22-04-2016 IPR015902 Glycoside hydrolase, family 13 GO:0003824 SRM_RS04510 785153859166e405b644e76871fa3031 590 PIRSF PIRSF006337 5 545 1.6E-201 T 22-04-2016 IPR012768 Malto-oligosyltrehalose trehalohydrolase GO:0004553|GO:0005992 KEGG: 00520+3.2.1.14|MetaCyc: PWY-2661|MetaCyc: PWY-6902|UniPathway: UPA00299 SRM_RS04510 785153859166e405b644e76871fa3031 590 Gene3D G3DSA:2.60.40.10 10 92 2.3E-25 T 22-04-2016 IPR013783 Immunoglobulin-like fold SRM_RS04510 785153859166e405b644e76871fa3031 590 Pfam PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) 9 68 3.0E-5 T 22-04-2016 IPR004193 Glycoside hydrolase, family 13, N-terminal GO:0004553|GO:0005975 SRM_RS04510 785153859166e405b644e76871fa3031 590 SMART SM00642 90 458 1.2E-9 T 22-04-2016 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 SRM_RS04510 785153859166e405b644e76871fa3031 590 Gene3D G3DSA:3.20.20.80 98 438 3.7E-78 T 22-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 SRM_RS04510 785153859166e405b644e76871fa3031 590 Gene3D G3DSA:3.20.20.80 474 510 3.7E-78 T 22-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 SRM_RS04510 785153859166e405b644e76871fa3031 590 PANTHER PTHR10357:SF110 9 315 1.4E-99 T 22-04-2016 SRM_RS04510 785153859166e405b644e76871fa3031 590 PANTHER PTHR10357:SF110 482 540 1.4E-99 T 22-04-2016 SRM_RS04510 785153859166e405b644e76871fa3031 590 PANTHER PTHR10357:SF110 336 460 1.4E-99 T 22-04-2016 SRM_RS04510 785153859166e405b644e76871fa3031 590 SUPERFAMILY SSF51445 90 511 2.76E-106 T 22-04-2016 IPR017853 Glycoside hydrolase superfamily SRM_RS04510 785153859166e405b644e76871fa3031 590 TIGRFAM TIGR02402 trehalose_TreZ: malto-oligosyltrehalose trehalohydrolase 18 524 6.3E-198 T 22-04-2016 IPR012768 Malto-oligosyltrehalose trehalohydrolase GO:0004553|GO:0005992 KEGG: 00520+3.2.1.14|MetaCyc: PWY-2661|MetaCyc: PWY-6902|UniPathway: UPA00299 SRM_RS04510 785153859166e405b644e76871fa3031 590 SUPERFAMILY SSF81296 9 94 6.6E-20 T 22-04-2016 IPR014756 Immunoglobulin E-set SRM_RS15495 80603b8e5d28e79fa6e216439fa1e75d 830 SUPERFAMILY SSF50249 36 208 4.86E-39 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold SRM_RS15495 80603b8e5d28e79fa6e216439fa1e75d 830 Gene3D G3DSA:3.30.70.380 738 828 1.2E-25 T 22-04-2016 IPR005121 Phenylalanine-tRNA ligase, beta subunit, ferrodoxin-fold anticodon-binding GO:0000049|GO:0000287|GO:0004826|GO:0005524|GO:0006432|GO:0008033 KEGG: 00970+6.1.1.20 SRM_RS15495 80603b8e5d28e79fa6e216439fa1e75d 830 PANTHER PTHR10947 3 828 1.2E-253 T 22-04-2016 SRM_RS15495 80603b8e5d28e79fa6e216439fa1e75d 830 SMART SM00874 419 487 1.8E-27 T 22-04-2016 IPR005147 tRNA synthetase, B5-domain GO:0000287|GO:0003723|GO:0005524|GO:0006432 KEGG: 00970+6.1.1.20 SRM_RS15495 80603b8e5d28e79fa6e216439fa1e75d 830 Pfam PF01588 Putative tRNA binding domain 45 155 2.1E-23 T 22-04-2016 IPR002547 tRNA-binding domain GO:0000049 Reactome: REACT_71 SRM_RS15495 80603b8e5d28e79fa6e216439fa1e75d 830 Gene3D G3DSA:3.30.930.10 506 722 5.3E-44 T 22-04-2016 SRM_RS15495 80603b8e5d28e79fa6e216439fa1e75d 830 Gene3D G3DSA:3.30.56.20 419 491 1.4E-25 T 22-04-2016 IPR005147 tRNA synthetase, B5-domain GO:0000287|GO:0003723|GO:0005524|GO:0006432 KEGG: 00970+6.1.1.20 SRM_RS15495 80603b8e5d28e79fa6e216439fa1e75d 830 Pfam PF03483 B3/4 domain 229 402 3.1E-63 T 22-04-2016 IPR005146 B3/B4 tRNA-binding domain GO:0003723|GO:0004826 KEGG: 00970+6.1.1.20 SRM_RS15495 80603b8e5d28e79fa6e216439fa1e75d 830 PANTHER PTHR10947:SF0 3 828 1.2E-253 T 22-04-2016 SRM_RS15495 80603b8e5d28e79fa6e216439fa1e75d 830 TIGRFAM TIGR00472 pheT_bact: phenylalanine--tRNA ligase, beta subunit 2 828 6.2E-234 T 22-04-2016 IPR004532 Phenylalanine-tRNA ligase, class IIc, beta subunit GO:0000287|GO:0004826|GO:0005524|GO:0005737|GO:0006432 KEGG: 00970+6.1.1.20 SRM_RS15495 80603b8e5d28e79fa6e216439fa1e75d 830 SUPERFAMILY SSF56037 218 412 4.71E-69 T 22-04-2016 IPR020825 Phenylalanyl-tRNA synthetase, B3/B4 SRM_RS15495 80603b8e5d28e79fa6e216439fa1e75d 830 SUPERFAMILY SSF46955 420 491 2.75E-18 T 22-04-2016 IPR009061 Putative DNA-binding domain SRM_RS15495 80603b8e5d28e79fa6e216439fa1e75d 830 SMART SM00873 229 402 8.5E-88 T 22-04-2016 IPR005146 B3/B4 tRNA-binding domain GO:0003723|GO:0004826 KEGG: 00970+6.1.1.20 SRM_RS15495 80603b8e5d28e79fa6e216439fa1e75d 830 SUPERFAMILY SSF54991 732 828 1.24E-25 T 22-04-2016 IPR005121 Phenylalanine-tRNA ligase, beta subunit, ferrodoxin-fold anticodon-binding GO:0000049|GO:0000287|GO:0004826|GO:0005524|GO:0006432|GO:0008033 KEGG: 00970+6.1.1.20 SRM_RS15495 80603b8e5d28e79fa6e216439fa1e75d 830 Pfam PF03147 Ferredoxin-fold anticodon binding domain 736 828 8.6E-24 T 22-04-2016 IPR005121 Phenylalanine-tRNA ligase, beta subunit, ferrodoxin-fold anticodon-binding GO:0000049|GO:0000287|GO:0004826|GO:0005524|GO:0006432|GO:0008033 KEGG: 00970+6.1.1.20 SRM_RS15495 80603b8e5d28e79fa6e216439fa1e75d 830 Pfam PF03484 tRNA synthetase B5 domain 421 487 4.1E-18 T 22-04-2016 IPR005147 tRNA synthetase, B5-domain GO:0000287|GO:0003723|GO:0005524|GO:0006432 KEGG: 00970+6.1.1.20 SRM_RS15495 80603b8e5d28e79fa6e216439fa1e75d 830 Gene3D G3DSA:2.40.50.140 41 162 1.2E-37 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold SRM_RS15495 80603b8e5d28e79fa6e216439fa1e75d 830 Gene3D G3DSA:3.50.40.10 217 411 2.4E-78 T 22-04-2016 IPR020825 Phenylalanyl-tRNA synthetase, B3/B4 SRM_RS15495 80603b8e5d28e79fa6e216439fa1e75d 830 Gene3D G3DSA:3.30.56.10 170 199 9.6E-25 T 22-04-2016 SRM_RS15495 80603b8e5d28e79fa6e216439fa1e75d 830 Gene3D G3DSA:3.30.56.10 3 38 9.6E-25 T 22-04-2016 SRM_RS15495 80603b8e5d28e79fa6e216439fa1e75d 830 SMART SM00896 736 828 8.7E-36 T 22-04-2016 IPR005121 Phenylalanine-tRNA ligase, beta subunit, ferrodoxin-fold anticodon-binding GO:0000049|GO:0000287|GO:0004826|GO:0005524|GO:0006432|GO:0008033 KEGG: 00970+6.1.1.20 SRM_RS15495 80603b8e5d28e79fa6e216439fa1e75d 830 SUPERFAMILY SSF55681 483 721 2.22E-32 T 22-04-2016 SRM_RS15495 80603b8e5d28e79fa6e216439fa1e75d 830 Hamap MF_00283 Phenylalanine--tRNA ligase beta subunit [pheT]. 3 822 39.883 T 22-04-2016 IPR004532 Phenylalanine-tRNA ligase, class IIc, beta subunit GO:0000287|GO:0004826|GO:0005524|GO:0005737|GO:0006432 KEGG: 00970+6.1.1.20 SRM_RS09535 4cb027e9b5e033d2976219b1d6fa6727 208 PANTHER PTHR30353 1 193 9.0E-37 T 22-04-2016 IPR032818 DedA family SRM_RS09535 4cb027e9b5e033d2976219b1d6fa6727 208 Pfam PF09335 SNARE associated Golgi protein 26 151 2.7E-17 T 22-04-2016 IPR032816 SNARE associated Golgi protein SRM_RS09620 be2e27d7f345233daa78e69ca3ea0609 200 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 44 58 3.3E-9 T 22-04-2016 SRM_RS09620 be2e27d7f345233daa78e69ca3ea0609 200 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 74 90 3.3E-9 T 22-04-2016 SRM_RS09620 be2e27d7f345233daa78e69ca3ea0609 200 SUPERFAMILY SSF52317 1 192 4.13E-52 T 22-04-2016 IPR029062 Class I glutamine amidotransferase-like SRM_RS09620 be2e27d7f345233daa78e69ca3ea0609 200 TIGRFAM TIGR00566 trpG_papA: glutamine amidotransferase of anthranilate synthase or aminodeoxychorismate synthase 1 188 4.2E-63 T 22-04-2016 IPR006221 Anthranilate synthase/para-aminobenzoate synthase like domain GO:0008152 KEGG: 00400+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661|UniPathway: UPA00035 SRM_RS09620 be2e27d7f345233daa78e69ca3ea0609 200 PANTHER PTHR11922 1 189 6.4E-82 T 22-04-2016 SRM_RS09620 be2e27d7f345233daa78e69ca3ea0609 200 Gene3D G3DSA:3.40.50.880 1 190 4.3E-62 T 22-04-2016 IPR029062 Class I glutamine amidotransferase-like SRM_RS09620 be2e27d7f345233daa78e69ca3ea0609 200 PANTHER PTHR11922:SF7 1 189 6.4E-82 T 22-04-2016 SRM_RS09620 be2e27d7f345233daa78e69ca3ea0609 200 PRINTS PR00097 Anthranilate synthase component II signature 2 16 7.8E-35 T 22-04-2016 SRM_RS09620 be2e27d7f345233daa78e69ca3ea0609 200 PRINTS PR00097 Anthranilate synthase component II signature 119 131 7.8E-35 T 22-04-2016 SRM_RS09620 be2e27d7f345233daa78e69ca3ea0609 200 PRINTS PR00097 Anthranilate synthase component II signature 47 56 7.8E-35 T 22-04-2016 SRM_RS09620 be2e27d7f345233daa78e69ca3ea0609 200 PRINTS PR00097 Anthranilate synthase component II signature 166 179 7.8E-35 T 22-04-2016 SRM_RS09620 be2e27d7f345233daa78e69ca3ea0609 200 PRINTS PR00097 Anthranilate synthase component II signature 74 85 7.8E-35 T 22-04-2016 SRM_RS09620 be2e27d7f345233daa78e69ca3ea0609 200 PRINTS PR00097 Anthranilate synthase component II signature 99 107 7.8E-35 T 22-04-2016 SRM_RS09620 be2e27d7f345233daa78e69ca3ea0609 200 PRINTS PR00096 Glutamine amidotransferase superfamily signature 166 179 2.9E-14 T 22-04-2016 SRM_RS09620 be2e27d7f345233daa78e69ca3ea0609 200 PRINTS PR00096 Glutamine amidotransferase superfamily signature 47 56 2.9E-14 T 22-04-2016 SRM_RS09620 be2e27d7f345233daa78e69ca3ea0609 200 PRINTS PR00096 Glutamine amidotransferase superfamily signature 74 85 2.9E-14 T 22-04-2016 SRM_RS09620 be2e27d7f345233daa78e69ca3ea0609 200 Pfam PF00117 Glutamine amidotransferase class-I 3 187 8.9E-50 T 22-04-2016 IPR017926 Glutamine amidotransferase Reactome: REACT_1698 SRM_RS06135 961b404535894175e80b2428473e69dd 655 Gene3D G3DSA:3.40.1360.10 242 363 2.6E-42 T 22-04-2016 SRM_RS06135 961b404535894175e80b2428473e69dd 655 SUPERFAMILY SSF57783 1 99 2.21E-36 T 22-04-2016 SRM_RS06135 961b404535894175e80b2428473e69dd 655 Pfam PF01807 CHC2 zinc finger 4 98 7.7E-35 T 22-04-2016 IPR002694 Zinc finger, CHC2-type GO:0003677|GO:0003896|GO:0006260|GO:0008270 SRM_RS06135 961b404535894175e80b2428473e69dd 655 Hamap MF_00974 DNA primase [dnaG]. 2 639 27.623 T 22-04-2016 IPR030846 DNA primase DnaG, bacteria GO:0003896|GO:0006269|GO:0008270 SRM_RS06135 961b404535894175e80b2428473e69dd 655 Pfam PF10410 DnaB-helicase binding domain of primase 370 422 2.3E-10 T 22-04-2016 IPR019475 DNA primase, DnaB-helicase binding domain GO:0016779 SRM_RS06135 961b404535894175e80b2428473e69dd 655 Gene3D G3DSA:1.20.50.20 381 424 8.2E-4 T 22-04-2016 SRM_RS06135 961b404535894175e80b2428473e69dd 655 Gene3D G3DSA:3.90.980.10 112 241 5.4E-42 T 22-04-2016 IPR013264 DNA primase, catalytic core, N-terminal SRM_RS06135 961b404535894175e80b2428473e69dd 655 SMART SM00400 34 88 9.4E-31 T 22-04-2016 IPR002694 Zinc finger, CHC2-type GO:0003677|GO:0003896|GO:0006260|GO:0008270 SRM_RS06135 961b404535894175e80b2428473e69dd 655 Gene3D G3DSA:3.90.580.10 2 99 1.4E-39 T 22-04-2016 IPR002694 Zinc finger, CHC2-type GO:0003677|GO:0003896|GO:0006260|GO:0008270 SRM_RS06135 961b404535894175e80b2428473e69dd 655 Pfam PF08275 DNA primase catalytic core, N-terminal domain 122 253 4.5E-41 T 22-04-2016 IPR013264 DNA primase, catalytic core, N-terminal SRM_RS06135 961b404535894175e80b2428473e69dd 655 TIGRFAM TIGR01391 dnaG: DNA primase 3 415 1.4E-137 T 22-04-2016 IPR006295 DNA primase, DnaG GO:0003896|GO:0006269 SRM_RS06135 961b404535894175e80b2428473e69dd 655 SUPERFAMILY SSF56731 113 423 4.45E-96 T 22-04-2016 SRM_RS06135 961b404535894175e80b2428473e69dd 655 Pfam PF13155 Toprim-like 264 347 1.4E-18 T 22-04-2016 SRM_RS06135 961b404535894175e80b2428473e69dd 655 PIRSF PIRSF002811 1 645 4.1E-162 T 22-04-2016 IPR030846 DNA primase DnaG, bacteria GO:0003896|GO:0006269|GO:0008270 SRM_RS06135 961b404535894175e80b2428473e69dd 655 SMART SM00493 260 331 1.3E-15 T 22-04-2016 IPR006171 Toprim domain SRM_RS06135 961b404535894175e80b2428473e69dd 655 PANTHER PTHR30313 1 646 2.1E-139 T 22-04-2016 SRM_RS07240 33d39443de71c8f68b428a516c455554 459 SUPERFAMILY SSF52540 143 386 3.03E-74 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SRM_RS07240 33d39443de71c8f68b428a516c455554 459 SMART SM00448 2 113 2.6E-38 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SRM_RS07240 33d39443de71c8f68b428a516c455554 459 SUPERFAMILY SSF52172 1 188 2.13E-46 T 22-04-2016 IPR011006 CheY-like superfamily SRM_RS07240 33d39443de71c8f68b428a516c455554 459 Pfam PF00158 Sigma-54 interaction domain 144 310 2.5E-70 T 22-04-2016 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 SRM_RS07240 33d39443de71c8f68b428a516c455554 459 Pfam PF02954 Bacterial regulatory protein, Fis family 413 453 5.5E-9 T 22-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 SRM_RS07240 33d39443de71c8f68b428a516c455554 459 Pfam PF00072 Response regulator receiver domain 4 113 3.0E-31 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SRM_RS07240 33d39443de71c8f68b428a516c455554 459 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 230 245 - T 22-04-2016 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 SRM_RS07240 33d39443de71c8f68b428a516c455554 459 Gene3D G3DSA:3.40.50.2300 1 125 9.5E-39 T 22-04-2016 SRM_RS07240 33d39443de71c8f68b428a516c455554 459 PANTHER PTHR32071 4 459 1.9E-188 T 22-04-2016 SRM_RS07240 33d39443de71c8f68b428a516c455554 459 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 436 456 4.8E-5 T 22-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 SRM_RS07240 33d39443de71c8f68b428a516c455554 459 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 419 436 4.8E-5 T 22-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 SRM_RS07240 33d39443de71c8f68b428a516c455554 459 SUPERFAMILY SSF46689 357 455 6.27E-14 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 SRM_RS07240 33d39443de71c8f68b428a516c455554 459 SMART SM00382 164 307 2.0E-10 T 22-04-2016 IPR003593 AAA+ ATPase domain SRM_RS07240 33d39443de71c8f68b428a516c455554 459 Gene3D G3DSA:3.40.50.300 143 316 1.9E-58 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SRM_RS07240 33d39443de71c8f68b428a516c455554 459 Gene3D G3DSA:1.10.10.60 407 456 5.1E-11 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 SRM_RS07240 33d39443de71c8f68b428a516c455554 459 Gene3D G3DSA:1.10.8.60 317 387 1.3E-25 T 22-04-2016 SRM_RS08720 e814e1e0af0d30f018863ac8af34e952 249 TIGRFAM TIGR00093 TIGR00093: pseudouridine synthase 75 235 1.3E-47 T 22-04-2016 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F GO:0001522|GO:0003723|GO:0009451|GO:0016866 SRM_RS08720 e814e1e0af0d30f018863ac8af34e952 249 Pfam PF00849 RNA pseudouridylate synthase 70 205 2.5E-22 T 22-04-2016 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 SRM_RS08720 e814e1e0af0d30f018863ac8af34e952 249 ProSitePatterns PS01149 Rsu family of pseudouridine synthase signature. 111 125 - T 22-04-2016 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0016866 SRM_RS08720 e814e1e0af0d30f018863ac8af34e952 249 SUPERFAMILY SSF55174 11 97 1.44E-18 T 22-04-2016 SRM_RS08720 e814e1e0af0d30f018863ac8af34e952 249 PANTHER PTHR21600:SF2 4 249 3.7E-81 T 22-04-2016 SRM_RS08720 e814e1e0af0d30f018863ac8af34e952 249 Gene3D G3DSA:3.10.290.10 9 72 2.6E-23 T 22-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 SRM_RS08720 e814e1e0af0d30f018863ac8af34e952 249 Pfam PF01479 S4 domain 11 57 3.7E-11 T 22-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 SRM_RS08720 e814e1e0af0d30f018863ac8af34e952 249 PANTHER PTHR21600 4 249 3.7E-81 T 22-04-2016 SRM_RS08720 e814e1e0af0d30f018863ac8af34e952 249 SUPERFAMILY SSF55120 71 239 1.17E-41 T 22-04-2016 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 SRM_RS08720 e814e1e0af0d30f018863ac8af34e952 249 SMART SM00363 11 72 1.2E-14 T 22-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 SRM_RS09765 16d40c8997568f59461ce37104442517 118 PANTHER PTHR34583:SF2 1 112 1.1E-36 T 22-04-2016 SRM_RS09765 16d40c8997568f59461ce37104442517 118 Pfam PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L 5 110 3.3E-26 T 22-04-2016 IPR001133 NADH-ubiquinone oxidoreductase chain 4L/K GO:0016651|GO:0042773|GO:0055114 SRM_RS09765 16d40c8997568f59461ce37104442517 118 PANTHER PTHR34583 1 112 1.1E-36 T 22-04-2016 SRM_RS03280 384d4ffc5d9b608fe6d96269c85777ce 177 TIGRFAM TIGR02436 TIGR02436: four helix bundle protein 24 130 4.4E-29 T 22-04-2016 IPR012657 23S rRNA-intervening sequence protein SRM_RS03280 384d4ffc5d9b608fe6d96269c85777ce 177 Pfam PF05635 23S rRNA-intervening sequence protein 20 123 1.1E-30 T 22-04-2016 IPR012657 23S rRNA-intervening sequence protein SRM_RS03280 384d4ffc5d9b608fe6d96269c85777ce 177 Gene3D G3DSA:1.20.1440.60 16 132 9.2E-31 T 22-04-2016 IPR012657 23S rRNA-intervening sequence protein SRM_RS03280 384d4ffc5d9b608fe6d96269c85777ce 177 PANTHER PTHR38471:SF2 16 137 1.0E-26 T 22-04-2016 SRM_RS03280 384d4ffc5d9b608fe6d96269c85777ce 177 SUPERFAMILY SSF158446 18 132 7.32E-32 T 22-04-2016 SRM_RS03280 384d4ffc5d9b608fe6d96269c85777ce 177 PANTHER PTHR38471 16 137 1.0E-26 T 22-04-2016 SRM_RS01715 7ba34ddb8c5fea93f44bfd59d0eed1d1 546 Pfam PF00733 Asparagine synthase 102 506 4.0E-47 T 22-04-2016 IPR001962 Asparagine synthase GO:0004066|GO:0006529 SRM_RS01715 7ba34ddb8c5fea93f44bfd59d0eed1d1 546 PANTHER PTHR11772 373 504 1.2E-34 T 22-04-2016 SRM_RS01715 7ba34ddb8c5fea93f44bfd59d0eed1d1 546 PANTHER PTHR11772 1 253 1.2E-34 T 22-04-2016 SRM_RS01715 7ba34ddb8c5fea93f44bfd59d0eed1d1 546 SUPERFAMILY SSF56235 1 81 7.62E-12 T 22-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal SRM_RS01715 7ba34ddb8c5fea93f44bfd59d0eed1d1 546 PANTHER PTHR11772:SF10 373 504 1.2E-34 T 22-04-2016 SRM_RS01715 7ba34ddb8c5fea93f44bfd59d0eed1d1 546 PANTHER PTHR11772:SF10 1 253 1.2E-34 T 22-04-2016 SRM_RS01715 7ba34ddb8c5fea93f44bfd59d0eed1d1 546 Gene3D G3DSA:3.40.50.620 351 527 1.4E-49 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold SRM_RS01715 7ba34ddb8c5fea93f44bfd59d0eed1d1 546 Gene3D G3DSA:3.40.50.620 82 249 1.4E-49 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold SRM_RS01715 7ba34ddb8c5fea93f44bfd59d0eed1d1 546 SUPERFAMILY SSF52402 78 251 2.03E-37 T 22-04-2016 SRM_RS01715 7ba34ddb8c5fea93f44bfd59d0eed1d1 546 SUPERFAMILY SSF52402 377 499 2.03E-37 T 22-04-2016 SRM_RS01715 7ba34ddb8c5fea93f44bfd59d0eed1d1 546 PIRSF PIRSF001589 1 541 4.1E-52 T 22-04-2016 SRM_RS01715 7ba34ddb8c5fea93f44bfd59d0eed1d1 546 Gene3D G3DSA:3.60.20.10 1 81 1.2E-16 T 22-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal SRM_RS04535 3322ddc59ccaf09acbc230cbd162a8fa 265 PIRSF PIRSF001430 1 252 1.5E-69 T 22-04-2016 IPR001406 Pseudouridine synthase I, TruA GO:0001522|GO:0003723|GO:0009451|GO:0009982 SRM_RS04535 3322ddc59ccaf09acbc230cbd162a8fa 265 PANTHER PTHR11142 1 246 1.1E-78 T 22-04-2016 IPR001406 Pseudouridine synthase I, TruA GO:0001522|GO:0003723|GO:0009451|GO:0009982 SRM_RS04535 3322ddc59ccaf09acbc230cbd162a8fa 265 Hamap MF_00171 tRNA pseudouridine synthase A [truA]. 2 244 31.958 T 22-04-2016 IPR001406 Pseudouridine synthase I, TruA GO:0001522|GO:0003723|GO:0009451|GO:0009982 SRM_RS04535 3322ddc59ccaf09acbc230cbd162a8fa 265 TIGRFAM TIGR00071 hisT_truA: tRNA pseudouridine(38-40) synthase 6 238 9.9E-51 T 22-04-2016 IPR001406 Pseudouridine synthase I, TruA GO:0001522|GO:0003723|GO:0009451|GO:0009982 SRM_RS04535 3322ddc59ccaf09acbc230cbd162a8fa 265 Gene3D G3DSA:3.30.70.660 107 245 1.9E-34 T 22-04-2016 IPR020095 Pseudouridine synthase I, TruA, C-terminal GO:0001522|GO:0003723|GO:0009451|GO:0009982 SRM_RS04535 3322ddc59ccaf09acbc230cbd162a8fa 265 PANTHER PTHR11142:SF0 1 246 1.1E-78 T 22-04-2016 SRM_RS04535 3322ddc59ccaf09acbc230cbd162a8fa 265 SUPERFAMILY SSF55120 1 247 8.78E-72 T 22-04-2016 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 SRM_RS04535 3322ddc59ccaf09acbc230cbd162a8fa 265 Gene3D G3DSA:3.30.70.580 1 105 6.2E-36 T 22-04-2016 IPR020094 Pseudouridine synthase I, TruA, N-terminal GO:0001522|GO:0003723|GO:0009451|GO:0009982 SRM_RS04535 3322ddc59ccaf09acbc230cbd162a8fa 265 Pfam PF01416 tRNA pseudouridine synthase 141 245 5.4E-24 T 22-04-2016 IPR020097 Pseudouridine synthase I, TruA, alpha/beta domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 SRM_RS04535 3322ddc59ccaf09acbc230cbd162a8fa 265 Pfam PF01416 tRNA pseudouridine synthase 9 104 1.4E-10 T 22-04-2016 IPR020097 Pseudouridine synthase I, TruA, alpha/beta domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 SRM_RS12400 4ccb6956802f3d3c298f5618ebde5950 296 PANTHER PTHR11727 28 291 1.7E-77 T 22-04-2016 IPR001737 Ribosomal RNA adenine methyltransferase KsgA/Erm SRM_RS12400 4ccb6956802f3d3c298f5618ebde5950 296 SUPERFAMILY SSF53335 34 287 6.23E-68 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SRM_RS12400 4ccb6956802f3d3c298f5618ebde5950 296 TIGRFAM TIGR00755 ksgA: ribosomal RNA small subunit methyltransferase A 34 285 1.4E-73 T 22-04-2016 IPR011530 Ribosomal RNA adenine dimethylase GO:0000179|GO:0006364 SRM_RS12400 4ccb6956802f3d3c298f5618ebde5950 296 Hamap MF_00607 Ribosomal RNA small subunit methyltransferase A [rsmA]. 34 287 51.001 T 22-04-2016 IPR011530 Ribosomal RNA adenine dimethylase GO:0000179|GO:0006364 SRM_RS12400 4ccb6956802f3d3c298f5618ebde5950 296 Gene3D G3DSA:3.40.50.150 34 219 2.5E-67 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SRM_RS12400 4ccb6956802f3d3c298f5618ebde5950 296 SMART SM00650 50 220 1.7E-61 T 22-04-2016 IPR020598 Ribosomal RNA adenine methylase transferase, N-terminal GO:0000154|GO:0000179|GO:0008649 SRM_RS12400 4ccb6956802f3d3c298f5618ebde5950 296 Gene3D G3DSA:1.10.8.100 232 286 8.0E-16 T 22-04-2016 IPR023165 rRNA adenine dimethylase-like SRM_RS12400 4ccb6956802f3d3c298f5618ebde5950 296 Pfam PF00398 Ribosomal RNA adenine dimethylase 37 279 4.2E-49 T 22-04-2016 IPR001737 Ribosomal RNA adenine methyltransferase KsgA/Erm SRM_RS12400 4ccb6956802f3d3c298f5618ebde5950 296 ProSitePatterns PS01131 Ribosomal RNA adenine dimethylases signature. 66 93 - T 22-04-2016 IPR020596 Ribosomal RNA adenine methylase transferase, conserved site GO:0000154|GO:0000179|GO:0008649 SRM_RS02720 9d7e1aa66c258f5136660875f46822bf 1030 Pfam PF13715 CarboxypepD_reg-like domain 54 136 6.2E-19 T 22-04-2016 SRM_RS02720 9d7e1aa66c258f5136660875f46822bf 1030 TIGRFAM TIGR04056 OMP_RagA_SusC: TonB-linked outer membrane protein, SusC/RagA family 52 1030 4.1E-234 T 22-04-2016 IPR023996 TonB-dependent outer membrane protein, SusC/RagA UniPathway: UPA00153 SRM_RS02720 9d7e1aa66c258f5136660875f46822bf 1030 Gene3D G3DSA:2.40.170.20 883 1029 2.3E-52 T 22-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 SRM_RS02720 9d7e1aa66c258f5136660875f46822bf 1030 Gene3D G3DSA:2.40.170.20 336 797 2.3E-52 T 22-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 SRM_RS02720 9d7e1aa66c258f5136660875f46822bf 1030 Gene3D G3DSA:2.40.170.20 266 288 2.3E-52 T 22-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 SRM_RS02720 9d7e1aa66c258f5136660875f46822bf 1030 Gene3D G3DSA:2.40.170.20 840 846 2.3E-52 T 22-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 SRM_RS02720 9d7e1aa66c258f5136660875f46822bf 1030 Pfam PF07715 TonB-dependent Receptor Plug Domain 146 264 4.4E-21 T 22-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 SRM_RS02720 9d7e1aa66c258f5136660875f46822bf 1030 SUPERFAMILY SSF56935 448 797 1.65E-89 T 22-04-2016 SRM_RS02720 9d7e1aa66c258f5136660875f46822bf 1030 SUPERFAMILY SSF56935 132 288 1.65E-89 T 22-04-2016 SRM_RS02720 9d7e1aa66c258f5136660875f46822bf 1030 SUPERFAMILY SSF56935 327 417 1.65E-89 T 22-04-2016 SRM_RS02720 9d7e1aa66c258f5136660875f46822bf 1030 SUPERFAMILY SSF56935 873 918 1.65E-89 T 22-04-2016 SRM_RS02720 9d7e1aa66c258f5136660875f46822bf 1030 SUPERFAMILY SSF56935 945 1028 1.65E-89 T 22-04-2016 SRM_RS02720 9d7e1aa66c258f5136660875f46822bf 1030 Gene3D G3DSA:2.170.130.10 140 265 1.7E-20 T 22-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 SRM_RS02720 9d7e1aa66c258f5136660875f46822bf 1030 TIGRFAM TIGR04057 SusC_RagA_signa: TonB-dependent outer membrane receptor, SusC/RagA subfamily, signature region 240 270 8.0E-18 T 22-04-2016 IPR023997 TonB-dependent outer membrane protein SusC/RagA, conserved site UniPathway: UPA00153 SRM_RS02720 9d7e1aa66c258f5136660875f46822bf 1030 SUPERFAMILY SSF49464 52 133 9.16E-18 T 22-04-2016 IPR008969 Carboxypeptidase-like, regulatory domain SRM_RS02720 9d7e1aa66c258f5136660875f46822bf 1030 PANTHER PTHR11532 490 1028 2.5E-222 T 22-04-2016 SRM_RS02720 9d7e1aa66c258f5136660875f46822bf 1030 PANTHER PTHR11532 25 390 2.5E-222 T 22-04-2016 SRM_RS02720 9d7e1aa66c258f5136660875f46822bf 1030 PANTHER PTHR11532:SF57 490 1028 2.5E-222 T 22-04-2016 SRM_RS02720 9d7e1aa66c258f5136660875f46822bf 1030 PANTHER PTHR11532:SF57 25 390 2.5E-222 T 22-04-2016 SRM_RS02720 9d7e1aa66c258f5136660875f46822bf 1030 Gene3D G3DSA:2.60.40.1120 53 139 4.1E-14 T 22-04-2016 IPR014766 Carboxypeptidase, regulatory domain SRM_RS14010 ee541adaf6699c4aa47badeeaae5a0ed 760 Pfam PF00512 His Kinase A (phospho-acceptor) domain 516 582 2.4E-15 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SRM_RS14010 ee541adaf6699c4aa47badeeaae5a0ed 760 Gene3D G3DSA:1.10.287.130 510 578 3.3E-16 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SRM_RS14010 ee541adaf6699c4aa47badeeaae5a0ed 760 SMART SM00387 626 737 7.1E-37 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SRM_RS14010 ee541adaf6699c4aa47badeeaae5a0ed 760 SMART SM00388 516 582 3.7E-18 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SRM_RS14010 ee541adaf6699c4aa47badeeaae5a0ed 760 SUPERFAMILY SSF55874 573 735 2.49E-41 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SRM_RS14010 ee541adaf6699c4aa47badeeaae5a0ed 760 Pfam PF16927 N-terminal 7TM region of histidine kinase 19 233 5.9E-20 T 22-04-2016 IPR031621 Histidine kinase, N-terminal 7TM region SRM_RS14010 ee541adaf6699c4aa47badeeaae5a0ed 760 Pfam PF08448 PAS fold 387 491 1.8E-16 T 22-04-2016 IPR013656 PAS fold-4 SRM_RS14010 ee541adaf6699c4aa47badeeaae5a0ed 760 Gene3D G3DSA:3.30.450.20 358 487 5.4E-25 T 22-04-2016 SRM_RS14010 ee541adaf6699c4aa47badeeaae5a0ed 760 PANTHER PTHR24423 358 734 9.6E-108 T 22-04-2016 SRM_RS14010 ee541adaf6699c4aa47badeeaae5a0ed 760 PANTHER PTHR24423 155 182 9.6E-108 T 22-04-2016 SRM_RS14010 ee541adaf6699c4aa47badeeaae5a0ed 760 Gene3D G3DSA:3.30.565.10 582 740 2.6E-44 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SRM_RS14010 ee541adaf6699c4aa47badeeaae5a0ed 760 SUPERFAMILY SSF55785 359 487 1.2E-21 T 22-04-2016 IPR000014 PAS domain SRM_RS14010 ee541adaf6699c4aa47badeeaae5a0ed 760 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 627 735 5.5E-26 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SRM_RS14010 ee541adaf6699c4aa47badeeaae5a0ed 760 SUPERFAMILY SSF47384 508 584 1.35E-17 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SRM_RS14010 ee541adaf6699c4aa47badeeaae5a0ed 760 PRINTS PR00344 Bacterial sensor protein C-terminal signature 662 676 1.4E-15 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SRM_RS14010 ee541adaf6699c4aa47badeeaae5a0ed 760 PRINTS PR00344 Bacterial sensor protein C-terminal signature 721 734 1.4E-15 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SRM_RS14010 ee541adaf6699c4aa47badeeaae5a0ed 760 PRINTS PR00344 Bacterial sensor protein C-terminal signature 680 690 1.4E-15 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SRM_RS14010 ee541adaf6699c4aa47badeeaae5a0ed 760 PRINTS PR00344 Bacterial sensor protein C-terminal signature 697 715 1.4E-15 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SRM_RS14010 ee541adaf6699c4aa47badeeaae5a0ed 760 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 370 496 3.1E-15 T 22-04-2016 IPR000014 PAS domain SRM_RS11665 92c6e8f53c7ad800c82b29841962d3e1 427 SUPERFAMILY SSF52540 270 355 5.16E-20 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SRM_RS11665 92c6e8f53c7ad800c82b29841962d3e1 427 SUPERFAMILY SSF52540 1 228 5.16E-20 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SRM_RS11665 92c6e8f53c7ad800c82b29841962d3e1 427 Pfam PF13304 AAA domain, putative AbiEii toxin, Type IV TA system 23 96 4.6E-7 T 22-04-2016 IPR003959 ATPase, AAA-type, core GO:0005524 SRM_RS11665 92c6e8f53c7ad800c82b29841962d3e1 427 Pfam PF13304 AAA domain, putative AbiEii toxin, Type IV TA system 169 351 6.8E-18 T 22-04-2016 IPR003959 ATPase, AAA-type, core GO:0005524 SRM_RS11665 92c6e8f53c7ad800c82b29841962d3e1 427 Gene3D G3DSA:3.40.50.300 3 191 4.1E-26 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SRM_RS11665 92c6e8f53c7ad800c82b29841962d3e1 427 Gene3D G3DSA:3.40.50.300 240 368 4.1E-26 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SRM_RS09690 9408ac48a5adc311dafb83c05bd25a08 202 Pfam PF02472 Biopolymer transport protein ExbD/TolR 11 136 1.1E-20 T 22-04-2016 IPR003400 Biopolymer transport protein ExbD/TolR GO:0005215|GO:0006810|GO:0016020 SRM_RS08850 c8718d832fda2da3ef943857da11dec1 309 Pfam PF00392 Bacterial regulatory proteins, gntR family 16 77 1.4E-15 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 SRM_RS08850 c8718d832fda2da3ef943857da11dec1 309 SMART SM00345 18 77 1.4E-18 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 SRM_RS08850 c8718d832fda2da3ef943857da11dec1 309 Gene3D G3DSA:1.10.10.10 5 78 1.4E-22 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SRM_RS08850 c8718d832fda2da3ef943857da11dec1 309 SUPERFAMILY SSF46785 7 81 1.82E-20 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SRM_RS04685 2408142c02dda93dfb677515f64da8df 398 TIGRFAM TIGR03544 DivI1A_domain: DivIVA domain 3 35 1.0E-14 T 22-04-2016 IPR019933 DivIVA domain SRM_RS04685 2408142c02dda93dfb677515f64da8df 398 PANTHER PTHR35794 127 168 4.7E-28 T 22-04-2016 SRM_RS04685 2408142c02dda93dfb677515f64da8df 398 PANTHER PTHR35794 1 108 4.7E-28 T 22-04-2016 SRM_RS04685 2408142c02dda93dfb677515f64da8df 398 PANTHER PTHR35794:SF2 127 168 4.7E-28 T 22-04-2016 SRM_RS04685 2408142c02dda93dfb677515f64da8df 398 PANTHER PTHR35794:SF2 1 108 4.7E-28 T 22-04-2016 SRM_RS04685 2408142c02dda93dfb677515f64da8df 398 Pfam PF05103 DivIVA protein 3 133 7.3E-31 T 22-04-2016 IPR007793 DivIVA family SRM_RS02715 a423d072b06ce8e031762714658f6055 360 Gene3D G3DSA:3.40.50.2300 181 320 3.0E-49 T 22-04-2016 SRM_RS02715 a423d072b06ce8e031762714658f6055 360 SUPERFAMILY SSF47413 3 61 4.5E-17 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 SRM_RS02715 a423d072b06ce8e031762714658f6055 360 Gene3D G3DSA:3.40.50.2300 55 180 1.4E-34 T 22-04-2016 SRM_RS02715 a423d072b06ce8e031762714658f6055 360 PANTHER PTHR30146 2 347 3.0E-99 T 22-04-2016 SRM_RS02715 a423d072b06ce8e031762714658f6055 360 Pfam PF00356 Bacterial regulatory proteins, lacI family 4 48 7.0E-17 T 22-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 SRM_RS02715 a423d072b06ce8e031762714658f6055 360 SUPERFAMILY SSF53822 63 346 3.53E-62 T 22-04-2016 IPR028082 Periplasmic binding protein-like I SRM_RS02715 a423d072b06ce8e031762714658f6055 360 Gene3D G3DSA:1.10.260.40 3 54 5.6E-24 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 SRM_RS02715 a423d072b06ce8e031762714658f6055 360 SMART SM00354 2 72 6.4E-25 T 22-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 SRM_RS02715 a423d072b06ce8e031762714658f6055 360 Pfam PF13377 Periplasmic binding protein-like domain 177 342 3.8E-33 T 22-04-2016 SRM_RS08795 68b7af12cd1e64b13b4fd6dd6c438514 123 SUPERFAMILY SSF55620 1 122 4.23E-26 T 22-04-2016 SRM_RS08795 68b7af12cd1e64b13b4fd6dd6c438514 123 PANTHER PTHR12589 1 121 1.2E-26 T 22-04-2016 IPR007115 6-pyruvoyl tetrahydropterin synthase/QueD family protein SRM_RS08795 68b7af12cd1e64b13b4fd6dd6c438514 123 Pfam PF01242 6-pyruvoyl tetrahydropterin synthase 5 122 1.8E-25 T 22-04-2016 IPR007115 6-pyruvoyl tetrahydropterin synthase/QueD family protein SRM_RS08795 68b7af12cd1e64b13b4fd6dd6c438514 123 Gene3D G3DSA:3.30.479.10 1 122 2.4E-32 T 22-04-2016 SRM_RS08795 68b7af12cd1e64b13b4fd6dd6c438514 123 PANTHER PTHR12589:SF5 1 121 1.2E-26 T 22-04-2016 SRM_RS15370 7bfa5905af8084eb52b6ddc667125db7 497 PIRSF PIRSF017434 1 493 5.1E-159 T 22-04-2016 IPR016695 Purine 5'-nucleotidase SRM_RS15370 7bfa5905af8084eb52b6ddc667125db7 497 SUPERFAMILY SSF56784 7 471 2.58E-137 T 22-04-2016 IPR023214 HAD-like domain SRM_RS15370 7bfa5905af8084eb52b6ddc667125db7 497 TIGRFAM TIGR02244 HAD-IG-Ncltidse: HAD superfamily (subfamily IG) hydrolase, 5'-nucleotidase 11 338 2.2E-99 T 22-04-2016 IPR008380 HAD-superfamily hydrolase, subfamily IG, 5'-nucleotidase SRM_RS15370 7bfa5905af8084eb52b6ddc667125db7 497 PANTHER PTHR12103:SF15 6 488 1.1E-188 T 22-04-2016 SRM_RS15370 7bfa5905af8084eb52b6ddc667125db7 497 Gene3D G3DSA:3.40.50.1000 143 251 4.5E-6 T 22-04-2016 IPR023214 HAD-like domain SRM_RS15370 7bfa5905af8084eb52b6ddc667125db7 497 Gene3D G3DSA:3.40.50.1000 21 35 4.5E-6 T 22-04-2016 IPR023214 HAD-like domain SRM_RS15370 7bfa5905af8084eb52b6ddc667125db7 497 Pfam PF05761 5' nucleotidase family 11 471 4.5E-143 T 22-04-2016 IPR008380 HAD-superfamily hydrolase, subfamily IG, 5'-nucleotidase SRM_RS15370 7bfa5905af8084eb52b6ddc667125db7 497 PANTHER PTHR12103 6 488 1.1E-188 T 22-04-2016 IPR008380 HAD-superfamily hydrolase, subfamily IG, 5'-nucleotidase SRM_RS07280 ba9cd533d434ef9cd68a449c4ddb70fd 802 Gene3D G3DSA:3.90.226.10 486 635 5.5E-27 T 22-04-2016 IPR029045 ClpP/crotonase-like domain SRM_RS07280 ba9cd533d434ef9cd68a449c4ddb70fd 802 SUPERFAMILY SSF48179 210 325 2.64E-21 T 22-04-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 SRM_RS07280 ba9cd533d434ef9cd68a449c4ddb70fd 802 SUPERFAMILY SSF48179 360 451 5.36E-16 T 22-04-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 SRM_RS07280 ba9cd533d434ef9cd68a449c4ddb70fd 802 Gene3D G3DSA:1.10.1040.10 211 310 7.7E-18 T 22-04-2016 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 SRM_RS07280 ba9cd533d434ef9cd68a449c4ddb70fd 802 PANTHER PTHR23309:SF2 356 474 2.4E-105 T 22-04-2016 SRM_RS07280 ba9cd533d434ef9cd68a449c4ddb70fd 802 PANTHER PTHR23309:SF2 21 336 2.4E-105 T 22-04-2016 SRM_RS07280 ba9cd533d434ef9cd68a449c4ddb70fd 802 Gene3D G3DSA:3.40.50.720 18 210 2.8E-38 T 22-04-2016 IPR016040 NAD(P)-binding domain SRM_RS07280 ba9cd533d434ef9cd68a449c4ddb70fd 802 PANTHER PTHR23309 356 474 2.4E-105 T 22-04-2016 SRM_RS07280 ba9cd533d434ef9cd68a449c4ddb70fd 802 PANTHER PTHR23309 21 336 2.4E-105 T 22-04-2016 SRM_RS07280 ba9cd533d434ef9cd68a449c4ddb70fd 802 Pfam PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain 25 207 5.3E-44 T 22-04-2016 IPR006176 3-hydroxyacyl-CoA dehydrogenase, NAD binding GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7726|UniPathway: UPA00659 SRM_RS07280 ba9cd533d434ef9cd68a449c4ddb70fd 802 SUPERFAMILY SSF52096 483 798 6.81E-41 T 22-04-2016 IPR029045 ClpP/crotonase-like domain SRM_RS07280 ba9cd533d434ef9cd68a449c4ddb70fd 802 Pfam PF00378 Enoyl-CoA hydratase/isomerase 494 634 3.4E-14 T 22-04-2016 IPR001753 Crotonase superfamily GO:0003824|GO:0008152 SRM_RS07280 ba9cd533d434ef9cd68a449c4ddb70fd 802 Pfam PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain 210 309 1.2E-14 T 22-04-2016 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7726|UniPathway: UPA00659 SRM_RS07280 ba9cd533d434ef9cd68a449c4ddb70fd 802 Pfam PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain 383 420 1.6E-6 T 22-04-2016 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7726|UniPathway: UPA00659 SRM_RS07280 ba9cd533d434ef9cd68a449c4ddb70fd 802 SUPERFAMILY SSF51735 22 208 1.07E-39 T 22-04-2016 IPR016040 NAD(P)-binding domain SRM_RS07280 ba9cd533d434ef9cd68a449c4ddb70fd 802 Gene3D G3DSA:1.10.1040.10 376 444 4.3E-11 T 22-04-2016 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 SRM_RS11675 8cc1dc0d1ebd4603ac9ec8741091e6ca 206 Pfam PF04264 YceI-like domain 35 194 1.7E-19 T 22-04-2016 IPR007372 Lipid/polyisoprenoid-binding, YceI-like SRM_RS11675 8cc1dc0d1ebd4603ac9ec8741091e6ca 206 PANTHER PTHR34406 3 205 7.7E-14 T 22-04-2016 SRM_RS11675 8cc1dc0d1ebd4603ac9ec8741091e6ca 206 SUPERFAMILY SSF101874 34 194 2.88E-26 T 22-04-2016 IPR007372 Lipid/polyisoprenoid-binding, YceI-like SRM_RS11675 8cc1dc0d1ebd4603ac9ec8741091e6ca 206 PANTHER PTHR34406:SF1 3 205 7.7E-14 T 22-04-2016 SRM_RS11675 8cc1dc0d1ebd4603ac9ec8741091e6ca 206 SMART SM00867 32 197 2.8E-19 T 22-04-2016 IPR007372 Lipid/polyisoprenoid-binding, YceI-like SRM_RS11675 8cc1dc0d1ebd4603ac9ec8741091e6ca 206 Gene3D G3DSA:2.40.128.110 34 194 5.3E-26 T 22-04-2016 IPR007372 Lipid/polyisoprenoid-binding, YceI-like SRM_RS01190 423bb951f65c43c3799db1bc63b1d432 434 PANTHER PTHR30469 69 434 6.8E-86 T 22-04-2016 SRM_RS01190 423bb951f65c43c3799db1bc63b1d432 434 PANTHER PTHR30469:SF10 69 434 6.8E-86 T 22-04-2016 SRM_RS01190 423bb951f65c43c3799db1bc63b1d432 434 SUPERFAMILY SSF111369 131 349 3.79E-32 T 22-04-2016 SRM_RS01190 423bb951f65c43c3799db1bc63b1d432 434 Gene3D G3DSA:2.40.50.100 142 175 7.6E-14 T 22-04-2016 SRM_RS01190 423bb951f65c43c3799db1bc63b1d432 434 Gene3D G3DSA:2.40.50.100 236 267 7.6E-14 T 22-04-2016 SRM_RS01190 423bb951f65c43c3799db1bc63b1d432 434 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 117 432 1.3E-72 T 22-04-2016 IPR006143 RND efflux pump, membrane fusion protein GO:0016020|GO:0055085 SRM_RS01190 423bb951f65c43c3799db1bc63b1d432 434 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 135 344 1.1E-19 T 22-04-2016 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain SRM_RS15620 96db0244e9f616b85e10e137ea97abf9 896 ProSitePatterns PS00871 Chaperonins clpA/B signature 2. 634 652 - T 22-04-2016 IPR028299 ClpA/B, conserved site 2 SRM_RS15620 96db0244e9f616b85e10e137ea97abf9 896 SUPERFAMILY SSF52540 160 548 1.8E-90 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SRM_RS15620 96db0244e9f616b85e10e137ea97abf9 896 Gene3D G3DSA:1.10.8.60 786 870 2.6E-28 T 22-04-2016 SRM_RS15620 96db0244e9f616b85e10e137ea97abf9 896 SMART SM01086 777 869 1.5E-32 T 22-04-2016 IPR019489 Clp ATPase, C-terminal SRM_RS15620 96db0244e9f616b85e10e137ea97abf9 896 Pfam PF07724 AAA domain (Cdc48 subfamily) 600 771 8.2E-54 T 22-04-2016 IPR003959 ATPase, AAA-type, core GO:0005524 SRM_RS15620 96db0244e9f616b85e10e137ea97abf9 896 SMART SM00382 199 344 1.8E-11 T 22-04-2016 IPR003593 AAA+ ATPase domain SRM_RS15620 96db0244e9f616b85e10e137ea97abf9 896 SMART SM00382 600 742 1.7E-10 T 22-04-2016 IPR003593 AAA+ ATPase domain SRM_RS15620 96db0244e9f616b85e10e137ea97abf9 896 TIGRFAM TIGR03346 chaperone_ClpB: ATP-dependent chaperone protein ClpB 6 864 0.0 T 22-04-2016 IPR017730 Chaperonin ClpB GO:0005737|GO:0009408|GO:0016485 SRM_RS15620 96db0244e9f616b85e10e137ea97abf9 896 SUPERFAMILY SSF81923 5 157 1.37E-37 T 22-04-2016 IPR004176 Clp, N-terminal GO:0019538 SRM_RS15620 96db0244e9f616b85e10e137ea97abf9 896 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 649 667 3.2E-39 T 22-04-2016 IPR001270 ClpA/B family GO:0005524 SRM_RS15620 96db0244e9f616b85e10e137ea97abf9 896 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 711 725 3.2E-39 T 22-04-2016 IPR001270 ClpA/B family GO:0005524 SRM_RS15620 96db0244e9f616b85e10e137ea97abf9 896 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 678 696 3.2E-39 T 22-04-2016 IPR001270 ClpA/B family GO:0005524 SRM_RS15620 96db0244e9f616b85e10e137ea97abf9 896 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 604 622 3.2E-39 T 22-04-2016 IPR001270 ClpA/B family GO:0005524 SRM_RS15620 96db0244e9f616b85e10e137ea97abf9 896 Pfam PF02861 Clp amino terminal domain, pathogenicity island component 17 68 5.1E-12 T 22-04-2016 IPR004176 Clp, N-terminal GO:0019538 SRM_RS15620 96db0244e9f616b85e10e137ea97abf9 896 Pfam PF02861 Clp amino terminal domain, pathogenicity island component 95 146 4.6E-9 T 22-04-2016 IPR004176 Clp, N-terminal GO:0019538 SRM_RS15620 96db0244e9f616b85e10e137ea97abf9 896 Gene3D G3DSA:3.40.50.300 553 726 1.1E-53 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SRM_RS15620 96db0244e9f616b85e10e137ea97abf9 896 Gene3D G3DSA:3.40.50.300 760 785 1.1E-53 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SRM_RS15620 96db0244e9f616b85e10e137ea97abf9 896 Gene3D G3DSA:1.10.8.60 344 429 1.7E-36 T 22-04-2016 SRM_RS15620 96db0244e9f616b85e10e137ea97abf9 896 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 204 335 6.1E-13 T 22-04-2016 IPR003959 ATPase, AAA-type, core GO:0005524 SRM_RS15620 96db0244e9f616b85e10e137ea97abf9 896 Gene3D G3DSA:1.10.1780.10 1 148 1.2E-41 T 22-04-2016 IPR004176 Clp, N-terminal GO:0019538 SRM_RS15620 96db0244e9f616b85e10e137ea97abf9 896 SUPERFAMILY SSF52540 549 862 1.29E-78 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SRM_RS15620 96db0244e9f616b85e10e137ea97abf9 896 ProSitePatterns PS00870 Chaperonins clpA/B signature 1. 295 307 - T 22-04-2016 IPR018368 ClpA/B, conserved site 1 GO:0005524 SRM_RS15620 96db0244e9f616b85e10e137ea97abf9 896 PANTHER PTHR11638:SF18 1 888 0.0 T 22-04-2016 SRM_RS15620 96db0244e9f616b85e10e137ea97abf9 896 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 777 858 1.5E-24 T 22-04-2016 IPR019489 Clp ATPase, C-terminal SRM_RS15620 96db0244e9f616b85e10e137ea97abf9 896 PANTHER PTHR11638 1 888 0.0 T 22-04-2016 SRM_RS15620 96db0244e9f616b85e10e137ea97abf9 896 Gene3D G3DSA:3.40.50.300 160 343 1.4E-45 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SRM_RS08840 5deada1c7fcd9b71c718347114e5fffd 562 PANTHER PTHR11699 23 555 3.0E-259 T 22-04-2016 SRM_RS08840 5deada1c7fcd9b71c718347114e5fffd 562 SUPERFAMILY SSF53720 9 528 2.09E-120 T 22-04-2016 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 SRM_RS08840 5deada1c7fcd9b71c718347114e5fffd 562 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 321 332 - T 22-04-2016 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0008152|GO:0016491|GO:0055114 SRM_RS08840 5deada1c7fcd9b71c718347114e5fffd 562 Gene3D G3DSA:3.40.309.10 308 500 1.7E-48 T 22-04-2016 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0008152|GO:0016491|GO:0016620|GO:0055114 SRM_RS08840 5deada1c7fcd9b71c718347114e5fffd 562 Pfam PF00171 Aldehyde dehydrogenase family 57 523 2.8E-102 T 22-04-2016 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 SRM_RS08840 5deada1c7fcd9b71c718347114e5fffd 562 PANTHER PTHR11699:SF18 23 555 3.0E-259 T 22-04-2016 SRM_RS08840 5deada1c7fcd9b71c718347114e5fffd 562 TIGRFAM TIGR01236 D1pyr5carbox1: 1-pyrroline-5-carboxylate dehydrogenase 13 541 5.0E-237 T 22-04-2016 IPR005931 Delta-1-pyrroline-5-carboxylate dehydrogenase GO:0003842|GO:0006537|GO:0006561 KEGG: 00250+1.2.1.88|KEGG: 00330+1.2.1.88|MetaCyc: PWY-6853|UniPathway: UPA00261 SRM_RS08840 5deada1c7fcd9b71c718347114e5fffd 562 Gene3D G3DSA:3.40.605.10 42 307 1.7E-59 T 22-04-2016 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 SRM_RS08990 2fb10939b272dfda201969f831dc96b3 396 Pfam PF00108 Thiolase, N-terminal domain 4 264 1.0E-80 T 22-04-2016 IPR020616 Thiolase, N-terminal GO:0008152|GO:0016747 SRM_RS08990 2fb10939b272dfda201969f831dc96b3 396 Gene3D G3DSA:3.40.47.10 279 394 1.9E-49 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 SRM_RS08990 2fb10939b272dfda201969f831dc96b3 396 Gene3D G3DSA:3.40.47.10 146 196 1.9E-49 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 SRM_RS08990 2fb10939b272dfda201969f831dc96b3 396 Gene3D G3DSA:3.40.47.10 3 123 6.6E-67 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 SRM_RS08990 2fb10939b272dfda201969f831dc96b3 396 Gene3D G3DSA:3.40.47.10 197 278 6.6E-67 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 SRM_RS08990 2fb10939b272dfda201969f831dc96b3 396 ProSitePatterns PS00737 Thiolases signature 2. 341 357 - T 22-04-2016 IPR020613 Thiolase, conserved site GO:0008152|GO:0016747 SRM_RS08990 2fb10939b272dfda201969f831dc96b3 396 PANTHER PTHR18919:SF95 1 396 6.8E-187 T 22-04-2016 SRM_RS08990 2fb10939b272dfda201969f831dc96b3 396 SUPERFAMILY SSF53901 273 394 2.05E-35 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 SRM_RS08990 2fb10939b272dfda201969f831dc96b3 396 Pfam PF02803 Thiolase, C-terminal domain 273 394 2.5E-36 T 22-04-2016 IPR020617 Thiolase, C-terminal GO:0008152|GO:0016747 SRM_RS08990 2fb10939b272dfda201969f831dc96b3 396 TIGRFAM TIGR01930 AcCoA-C-Actrans: acetyl-CoA C-acyltransferase 6 393 3.4E-126 T 22-04-2016 IPR002155 Thiolase GO:0008152|GO:0016747 SRM_RS08990 2fb10939b272dfda201969f831dc96b3 396 SUPERFAMILY SSF53901 3 272 7.01E-75 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 SRM_RS08990 2fb10939b272dfda201969f831dc96b3 396 PANTHER PTHR18919 1 396 6.8E-187 T 22-04-2016 SRM_RS08990 2fb10939b272dfda201969f831dc96b3 396 ProSitePatterns PS00099 Thiolases active site. 376 389 - T 22-04-2016 IPR020610 Thiolase, active site GO:0008152|GO:0016747 SRM_RS08990 2fb10939b272dfda201969f831dc96b3 396 PIRSF PIRSF000429 1 396 2.7E-118 T 22-04-2016 IPR002155 Thiolase GO:0008152|GO:0016747 SRM_RS05955 86cd4196b258c4ae11a736319a28a8ce 192 Pfam PF01132 Elongation factor P (EF-P) OB domain 68 114 1.5E-16 T 22-04-2016 IPR001059 Translation elongation factor P/YeiP, central GO:0003746|GO:0006414 UniPathway: UPA00345 SRM_RS05955 86cd4196b258c4ae11a736319a28a8ce 192 TIGRFAM TIGR00038 efp: translation elongation factor P 3 186 9.0E-70 T 22-04-2016 IPR011768 Translation elongation factor P GO:0003746|GO:0005737|GO:0006414 UniPathway: UPA00345 SRM_RS05955 86cd4196b258c4ae11a736319a28a8ce 192 SMART SM01185 67 122 2.0E-19 T 22-04-2016 IPR001059 Translation elongation factor P/YeiP, central GO:0003746|GO:0006414 UniPathway: UPA00345 SRM_RS05955 86cd4196b258c4ae11a736319a28a8ce 192 SMART SM00841 130 185 8.9E-29 T 22-04-2016 IPR015365 Elongation factor P, C-terminal GO:0005737|GO:0043043 UniPathway: UPA00345 SRM_RS05955 86cd4196b258c4ae11a736319a28a8ce 192 PANTHER PTHR30053 1 187 9.5E-74 T 22-04-2016 SRM_RS05955 86cd4196b258c4ae11a736319a28a8ce 192 SUPERFAMILY SSF50104 1 63 4.03E-19 T 22-04-2016 IPR008991 Translation protein SH3-like domain SRM_RS05955 86cd4196b258c4ae11a736319a28a8ce 192 Gene3D G3DSA:2.40.50.140 129 186 1.3E-25 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold SRM_RS05955 86cd4196b258c4ae11a736319a28a8ce 192 ProSitePatterns PS01275 Elongation factor P signature. 151 170 - T 22-04-2016 IPR013852 Translation elongation factor P/YeiP, conserved site UniPathway: UPA00345 SRM_RS05955 86cd4196b258c4ae11a736319a28a8ce 192 Pfam PF08207 Elongation factor P (EF-P) KOW-like domain 4 60 1.3E-24 T 22-04-2016 IPR013185 Translation elongation factor, KOW-like UniPathway: UPA00345 SRM_RS05955 86cd4196b258c4ae11a736319a28a8ce 192 Gene3D G3DSA:2.30.30.30 1 63 3.6E-27 T 22-04-2016 IPR014722 Ribosomal protein L2 domain 2 SRM_RS05955 86cd4196b258c4ae11a736319a28a8ce 192 Pfam PF09285 Elongation factor P, C-terminal 130 185 6.7E-24 T 22-04-2016 IPR015365 Elongation factor P, C-terminal GO:0005737|GO:0043043 UniPathway: UPA00345 SRM_RS05955 86cd4196b258c4ae11a736319a28a8ce 192 SUPERFAMILY SSF50249 65 127 4.71E-13 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold SRM_RS05955 86cd4196b258c4ae11a736319a28a8ce 192 Gene3D G3DSA:2.40.50.140 64 128 8.8E-19 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold SRM_RS05955 86cd4196b258c4ae11a736319a28a8ce 192 SUPERFAMILY SSF50249 130 186 6.43E-17 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold SRM_RS05955 86cd4196b258c4ae11a736319a28a8ce 192 Hamap MF_00141 Elongation factor P [efp]. 1 186 41.797 T 22-04-2016 IPR011768 Translation elongation factor P GO:0003746|GO:0005737|GO:0006414 UniPathway: UPA00345 SRM_RS05955 86cd4196b258c4ae11a736319a28a8ce 192 PIRSF PIRSF005901 1 187 1.2E-59 T 22-04-2016 IPR020599 Translation elongation factor P/YeiP UniPathway: UPA00345 SRM_RS03960 8a40d4dad6e0afeefd3760e922a92c01 315 Pfam PF08666 SAF domain 260 314 4.4E-8 T 22-04-2016 IPR013974 SAF domain SRM_RS03960 8a40d4dad6e0afeefd3760e922a92c01 315 PANTHER PTHR23416:SF1 52 266 2.0E-36 T 22-04-2016 SRM_RS03960 8a40d4dad6e0afeefd3760e922a92c01 315 SUPERFAMILY SSF51269 249 314 1.3E-9 T 22-04-2016 IPR006190 Antifreeze-like/N-acetylneuraminic acid synthase C-terminal SRM_RS03960 8a40d4dad6e0afeefd3760e922a92c01 315 PANTHER PTHR23416 52 266 2.0E-36 T 22-04-2016 SRM_RS03960 8a40d4dad6e0afeefd3760e922a92c01 315 SUPERFAMILY SSF51569 3 239 7.45E-45 T 22-04-2016 SRM_RS03960 8a40d4dad6e0afeefd3760e922a92c01 315 SMART SM00858 257 315 2.2E-5 T 22-04-2016 IPR013974 SAF domain SRM_RS03960 8a40d4dad6e0afeefd3760e922a92c01 315 Gene3D G3DSA:3.90.1210.10 260 314 4.0E-10 T 22-04-2016 IPR006190 Antifreeze-like/N-acetylneuraminic acid synthase C-terminal SRM_RS03960 8a40d4dad6e0afeefd3760e922a92c01 315 Pfam PF03102 NeuB family 22 234 4.4E-43 T 22-04-2016 IPR013132 N-acetylneuraminic acid synthase, N-terminal GO:0016051 SRM_RS03960 8a40d4dad6e0afeefd3760e922a92c01 315 Gene3D G3DSA:3.20.20.70 1 234 3.8E-54 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 SRM_RS02635 227e6f1937e5483cd18e681e68f57048 505 SUPERFAMILY SSF52540 209 504 7.4E-55 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SRM_RS02635 227e6f1937e5483cd18e681e68f57048 505 PANTHER PTHR11649 75 504 3.3E-131 T 22-04-2016 SRM_RS02635 227e6f1937e5483cd18e681e68f57048 505 Gene3D G3DSA:3.30.300.20 427 505 3.3E-28 T 22-04-2016 IPR015946 K homology domain-like, alpha/beta SRM_RS02635 227e6f1937e5483cd18e681e68f57048 505 Gene3D G3DSA:3.40.50.300 75 243 3.8E-47 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SRM_RS02635 227e6f1937e5483cd18e681e68f57048 505 Gene3D G3DSA:3.40.50.300 244 426 8.6E-49 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SRM_RS02635 227e6f1937e5483cd18e681e68f57048 505 TIGRFAM TIGR03594 GTPase_EngA: ribosome-associated GTPase EngA 75 503 4.0E-158 T 22-04-2016 IPR016484 GTP-binding protein EngA GO:0005525 SRM_RS02635 227e6f1937e5483cd18e681e68f57048 505 Hamap MF_00195 GTPase Der [der]. 73 505 36.21 T 22-04-2016 IPR016484 GTP-binding protein EngA GO:0005525 SRM_RS02635 227e6f1937e5483cd18e681e68f57048 505 Pfam PF01926 50S ribosome-binding GTPase 76 191 1.2E-29 T 22-04-2016 IPR006073 GTP binding domain GO:0005525 SRM_RS02635 227e6f1937e5483cd18e681e68f57048 505 Pfam PF01926 50S ribosome-binding GTPase 247 364 7.0E-22 T 22-04-2016 IPR006073 GTP binding domain GO:0005525 SRM_RS02635 227e6f1937e5483cd18e681e68f57048 505 Pfam PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal 422 503 5.1E-27 T 22-04-2016 IPR032859 GTPase Der, C-terminal KH-domain-like SRM_RS02635 227e6f1937e5483cd18e681e68f57048 505 PIRSF PIRSF006485 73 505 1.2E-156 T 22-04-2016 IPR016484 GTP-binding protein EngA GO:0005525 SRM_RS02635 227e6f1937e5483cd18e681e68f57048 505 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 144 162 1.7E-7 T 22-04-2016 IPR006073 GTP binding domain GO:0005525 SRM_RS02635 227e6f1937e5483cd18e681e68f57048 505 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 76 96 1.7E-7 T 22-04-2016 IPR006073 GTP binding domain GO:0005525 SRM_RS02635 227e6f1937e5483cd18e681e68f57048 505 PANTHER PTHR11649:SF5 75 504 3.3E-131 T 22-04-2016 IPR016484 GTP-binding protein EngA GO:0005525 SRM_RS02635 227e6f1937e5483cd18e681e68f57048 505 SUPERFAMILY SSF52540 76 238 1.5E-48 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SRM_RS02635 227e6f1937e5483cd18e681e68f57048 505 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 245 408 2.1E-24 T 22-04-2016 IPR005225 Small GTP-binding protein domain GO:0005525 SRM_RS02635 227e6f1937e5483cd18e681e68f57048 505 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 76 226 1.4E-26 T 22-04-2016 IPR005225 Small GTP-binding protein domain GO:0005525 SRM_RS06595 42435b1ce10dcb05305b5ef2acb71a8e 200 TIGRFAM TIGR01017 rpsD_bact: ribosomal protein uS4 3 200 1.1E-76 T 22-04-2016 IPR005709 Ribosomal protein S4, bacterial-type GO:0003735|GO:0006412|GO:0015935 SRM_RS06595 42435b1ce10dcb05305b5ef2acb71a8e 200 Gene3D G3DSA:1.10.1050.10 1 97 2.7E-39 T 22-04-2016 IPR001912 Ribosomal protein S4/S9, N-terminal GO:0005622|GO:0019843 SRM_RS06595 42435b1ce10dcb05305b5ef2acb71a8e 200 SMART SM01390 3 91 5.3E-45 T 22-04-2016 IPR001912 Ribosomal protein S4/S9, N-terminal GO:0005622|GO:0019843 SRM_RS06595 42435b1ce10dcb05305b5ef2acb71a8e 200 ProSitePatterns PS00632 Ribosomal protein S4 signature. 90 114 - T 22-04-2016 IPR018079 Ribosomal protein S4, conserved site GO:0005622|GO:0019843 SRM_RS06595 42435b1ce10dcb05305b5ef2acb71a8e 200 PANTHER PTHR11831 1 200 1.2E-77 T 22-04-2016 IPR022801 Ribosomal protein S4/S9 SRM_RS06595 42435b1ce10dcb05305b5ef2acb71a8e 200 Pfam PF01479 S4 domain 93 139 8.6E-16 T 22-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 SRM_RS06595 42435b1ce10dcb05305b5ef2acb71a8e 200 Gene3D G3DSA:3.10.290.10 98 185 3.1E-29 T 22-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 SRM_RS06595 42435b1ce10dcb05305b5ef2acb71a8e 200 SUPERFAMILY SSF55174 2 200 3.4E-63 T 22-04-2016 SRM_RS06595 42435b1ce10dcb05305b5ef2acb71a8e 200 Hamap MF_01306_B 30S ribosomal protein S4 [rpsD]. 1 200 34.298 T 22-04-2016 IPR005709 Ribosomal protein S4, bacterial-type GO:0003735|GO:0006412|GO:0015935 SRM_RS06595 42435b1ce10dcb05305b5ef2acb71a8e 200 PANTHER PTHR11831:SF4 1 200 1.2E-77 T 22-04-2016 SRM_RS06595 42435b1ce10dcb05305b5ef2acb71a8e 200 SMART SM00363 92 156 7.6E-14 T 22-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 SRM_RS06595 42435b1ce10dcb05305b5ef2acb71a8e 200 Pfam PF00163 Ribosomal protein S4/S9 N-terminal domain 3 91 3.4E-26 T 22-04-2016 IPR001912 Ribosomal protein S4/S9, N-terminal GO:0005622|GO:0019843 SRM_RS03235 105374bce8cd75eee065839941e91211 640 SUPERFAMILY SSF54980 336 421 5.28E-12 T 22-04-2016 IPR009022 Elongation factor G, III-V domain SRM_RS03235 105374bce8cd75eee065839941e91211 640 SUPERFAMILY SSF54980 432 545 1.1E-27 T 22-04-2016 IPR009022 Elongation factor G, III-V domain SRM_RS03235 105374bce8cd75eee065839941e91211 640 Pfam PF03144 Elongation factor Tu domain 2 253 315 2.8E-7 T 22-04-2016 IPR004161 Translation elongation factor EFTu/EF1A, domain 2 GO:0005525 SRM_RS03235 105374bce8cd75eee065839941e91211 640 Gene3D G3DSA:3.40.50.300 34 239 1.4E-59 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SRM_RS03235 105374bce8cd75eee065839941e91211 640 TIGRFAM TIGR01394 TypA_BipA: GTP-binding protein TypA/BipA 38 632 5.0E-264 T 22-04-2016 IPR006298 GTP-binding protein TypA GO:0005525 SRM_RS03235 105374bce8cd75eee065839941e91211 640 SUPERFAMILY SSF52540 27 239 1.37E-53 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SRM_RS03235 105374bce8cd75eee065839941e91211 640 Pfam PF00679 Elongation factor G C-terminus 431 515 7.6E-23 T 22-04-2016 IPR000640 Translation elongation factor EFG, V domain SRM_RS03235 105374bce8cd75eee065839941e91211 640 SMART SM00838 432 517 0.0061 T 22-04-2016 IPR000640 Translation elongation factor EFG, V domain SRM_RS03235 105374bce8cd75eee065839941e91211 640 SUPERFAMILY SSF50447 185 333 6.85E-25 T 22-04-2016 IPR009000 Translation protein, beta-barrel domain SRM_RS03235 105374bce8cd75eee065839941e91211 640 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 39 173 2.7E-23 T 22-04-2016 IPR005225 Small GTP-binding protein domain GO:0005525 SRM_RS03235 105374bce8cd75eee065839941e91211 640 PRINTS PR00315 GTP-binding elongation factor signature 104 114 1.2E-12 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 SRM_RS03235 105374bce8cd75eee065839941e91211 640 PRINTS PR00315 GTP-binding elongation factor signature 84 92 1.2E-12 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 SRM_RS03235 105374bce8cd75eee065839941e91211 640 PRINTS PR00315 GTP-binding elongation factor signature 120 131 1.2E-12 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 SRM_RS03235 105374bce8cd75eee065839941e91211 640 PRINTS PR00315 GTP-binding elongation factor signature 156 165 1.2E-12 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 SRM_RS03235 105374bce8cd75eee065839941e91211 640 PRINTS PR00315 GTP-binding elongation factor signature 40 53 1.2E-12 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 SRM_RS03235 105374bce8cd75eee065839941e91211 640 Pfam PF00009 Elongation factor Tu GTP binding domain 38 229 3.7E-52 T 22-04-2016 SRM_RS03235 105374bce8cd75eee065839941e91211 640 Gene3D G3DSA:2.40.30.10 240 336 4.7E-21 T 22-04-2016 SRM_RS03235 105374bce8cd75eee065839941e91211 640 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 77 92 - T 22-04-2016 IPR031157 Tr-type G domain, conserved site SRM_RS03235 105374bce8cd75eee065839941e91211 640 PANTHER PTHR23115:SF14 20 626 1.9E-239 T 22-04-2016 IPR006298 GTP-binding protein TypA GO:0005525 SRM_RS03235 105374bce8cd75eee065839941e91211 640 Gene3D G3DSA:2.40.50.250 516 610 6.1E-37 T 22-04-2016 SRM_RS03235 105374bce8cd75eee065839941e91211 640 Gene3D G3DSA:3.30.70.870 337 435 8.2E-33 T 22-04-2016 SRM_RS03235 105374bce8cd75eee065839941e91211 640 Gene3D G3DSA:3.30.70.240 436 514 1.6E-30 T 22-04-2016 IPR000640 Translation elongation factor EFG, V domain SRM_RS03235 105374bce8cd75eee065839941e91211 640 PANTHER PTHR23115 20 626 1.9E-239 T 22-04-2016 SRM_RS00955 20e7a3286f752847c05f04590c736b70 249 SUPERFAMILY SSF51735 7 249 5.83E-88 T 22-04-2016 IPR016040 NAD(P)-binding domain SRM_RS00955 20e7a3286f752847c05f04590c736b70 249 Gene3D G3DSA:3.40.50.720 1 249 1.3E-92 T 22-04-2016 IPR016040 NAD(P)-binding domain SRM_RS00955 20e7a3286f752847c05f04590c736b70 249 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 16 248 2.6E-68 T 22-04-2016 SRM_RS00955 20e7a3286f752847c05f04590c736b70 249 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 137 145 4.4E-17 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SRM_RS00955 20e7a3286f752847c05f04590c736b70 249 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 84 95 4.4E-17 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SRM_RS00955 20e7a3286f752847c05f04590c736b70 249 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 157 176 4.4E-17 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SRM_RS00955 20e7a3286f752847c05f04590c736b70 249 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 211 231 3.2E-48 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SRM_RS00955 20e7a3286f752847c05f04590c736b70 249 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 131 147 3.2E-48 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SRM_RS00955 20e7a3286f752847c05f04590c736b70 249 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 157 176 3.2E-48 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SRM_RS00955 20e7a3286f752847c05f04590c736b70 249 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 84 95 3.2E-48 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SRM_RS00955 20e7a3286f752847c05f04590c736b70 249 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 178 195 3.2E-48 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SRM_RS00955 20e7a3286f752847c05f04590c736b70 249 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 9 26 3.2E-48 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SRM_RS00955 20e7a3286f752847c05f04590c736b70 249 TIGRFAM TIGR01830 3oxo_ACP_reduc: 3-oxoacyl-[acyl-carrier-protein] reductase 10 247 3.1E-100 T 22-04-2016 IPR011284 3-oxoacyl-(acyl-carrier-protein) reductase GO:0004316|GO:0006633|GO:0051287|GO:0055114 KEGG: 00040+1.1.1.10|KEGG: 00061+1.1.1.100|KEGG: 00780+1.1.1.100|MetaCyc: PWY-5367|MetaCyc: PWY-5515|MetaCyc: PWY-5525|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWYG-321|UniPathway: UPA00094 SRM_RS00955 20e7a3286f752847c05f04590c736b70 249 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 144 172 - T 22-04-2016 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 SRM_RS00955 20e7a3286f752847c05f04590c736b70 249 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 8 193 9.3E-9 T 22-04-2016 SRM_RS02845 4acebeef0376029647cd0d0deeaeab66 432 TIGRFAM TIGR00928 purB: adenylosuccinate lyase 1 428 3.3E-163 T 22-04-2016 IPR004769 Adenylosuccinate lyase GO:0004018|GO:0009152 KEGG: 00230+4.3.2.2|KEGG: 00250+4.3.2.2|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7219|MetaCyc: PWY-7234|UniPathway: UPA00074|UniPathway: UPA00075 SRM_RS02845 4acebeef0376029647cd0d0deeaeab66 432 SUPERFAMILY SSF48557 3 427 7.7E-135 T 22-04-2016 IPR008948 L-Aspartase-like GO:0003824 SRM_RS02845 4acebeef0376029647cd0d0deeaeab66 432 Pfam PF00206 Lyase 6 282 1.1E-59 T 22-04-2016 IPR022761 Fumarate lyase, N-terminal SRM_RS02845 4acebeef0376029647cd0d0deeaeab66 432 ProSitePatterns PS00163 Fumarate lyases signature. 261 270 - T 22-04-2016 IPR020557 Fumarate lyase, conserved site GO:0003824 SRM_RS02845 4acebeef0376029647cd0d0deeaeab66 432 PANTHER PTHR11444:SF2 4 424 8.6E-162 T 22-04-2016 SRM_RS02845 4acebeef0376029647cd0d0deeaeab66 432 PRINTS PR00149 Fumarate lyase superfamily signature 88 106 7.0E-24 T 22-04-2016 IPR000362 Fumarate lyase family SRM_RS02845 4acebeef0376029647cd0d0deeaeab66 432 PRINTS PR00149 Fumarate lyase superfamily signature 261 277 7.0E-24 T 22-04-2016 IPR000362 Fumarate lyase family SRM_RS02845 4acebeef0376029647cd0d0deeaeab66 432 PRINTS PR00149 Fumarate lyase superfamily signature 133 151 7.0E-24 T 22-04-2016 IPR000362 Fumarate lyase family SRM_RS02845 4acebeef0376029647cd0d0deeaeab66 432 PRINTS PR00149 Fumarate lyase superfamily signature 216 243 7.0E-24 T 22-04-2016 IPR000362 Fumarate lyase family SRM_RS02845 4acebeef0376029647cd0d0deeaeab66 432 Gene3D G3DSA:1.20.200.10 91 355 3.5E-90 T 22-04-2016 SRM_RS02845 4acebeef0376029647cd0d0deeaeab66 432 PANTHER PTHR11444 4 424 8.6E-162 T 22-04-2016 IPR000362 Fumarate lyase family SRM_RS02845 4acebeef0376029647cd0d0deeaeab66 432 Gene3D G3DSA:1.10.275.10 2 90 1.1E-34 T 22-04-2016 IPR024083 Fumarase/histidase, N-terminal SRM_RS02845 4acebeef0376029647cd0d0deeaeab66 432 Gene3D G3DSA:1.10.40.30 356 429 1.2E-29 T 22-04-2016 SRM_RS02845 4acebeef0376029647cd0d0deeaeab66 432 Pfam PF10397 Adenylosuccinate lyase C-terminus 350 428 1.0E-22 T 22-04-2016 IPR019468 Adenylosuccinate lyase C-terminal KEGG: 00230+4.3.2.2|KEGG: 00250+4.3.2.2|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7219|MetaCyc: PWY-7234|UniPathway: UPA00074|UniPathway: UPA00075 SRM_RS02845 4acebeef0376029647cd0d0deeaeab66 432 PRINTS PR00145 Argininosuccinate lyase family signature 128 148 4.0E-6 T 22-04-2016 SRM_RS02845 4acebeef0376029647cd0d0deeaeab66 432 PRINTS PR00145 Argininosuccinate lyase family signature 216 240 4.0E-6 T 22-04-2016 SRM_RS02845 4acebeef0376029647cd0d0deeaeab66 432 PRINTS PR00145 Argininosuccinate lyase family signature 261 277 4.0E-6 T 22-04-2016 SRM_RS02845 4acebeef0376029647cd0d0deeaeab66 432 SMART SM00998 349 429 8.7E-36 T 22-04-2016 IPR019468 Adenylosuccinate lyase C-terminal KEGG: 00230+4.3.2.2|KEGG: 00250+4.3.2.2|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7219|MetaCyc: PWY-7234|UniPathway: UPA00074|UniPathway: UPA00075 SRM_RS03200 f08c02c5b1aadeadc15be79e1a4af4d8 202 SUPERFAMILY SSF50249 1 63 8.0E-17 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold SRM_RS03200 f08c02c5b1aadeadc15be79e1a4af4d8 202 Gene3D G3DSA:1.10.8.10 153 198 4.9E-7 T 22-04-2016 SRM_RS03200 f08c02c5b1aadeadc15be79e1a4af4d8 202 TIGRFAM TIGR00084 ruvA: Holliday junction DNA helicase RuvA 1 197 5.9E-41 T 22-04-2016 IPR000085 Bacterial DNA recombination protein RuvA GO:0003678|GO:0006281|GO:0006310 SRM_RS03200 f08c02c5b1aadeadc15be79e1a4af4d8 202 Gene3D G3DSA:1.10.150.20 67 139 3.5E-24 T 22-04-2016 SRM_RS03200 f08c02c5b1aadeadc15be79e1a4af4d8 202 Pfam PF14520 Helix-hairpin-helix domain 72 130 7.6E-14 T 22-04-2016 SRM_RS03200 f08c02c5b1aadeadc15be79e1a4af4d8 202 Pfam PF01330 RuvA N terminal domain 1 62 3.8E-21 T 22-04-2016 IPR013849 DNA helicase, Holliday junction RuvA type, domain I, bacterial GO:0005524|GO:0006281|GO:0006310|GO:0009378 SRM_RS03200 f08c02c5b1aadeadc15be79e1a4af4d8 202 Gene3D G3DSA:2.40.50.140 1 66 4.6E-25 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold SRM_RS03200 f08c02c5b1aadeadc15be79e1a4af4d8 202 Pfam PF07499 RuvA, C-terminal domain 154 199 2.1E-8 T 22-04-2016 IPR011114 DNA helicase, Holliday junction RuvA type, domain III, C-terminal GO:0005524|GO:0006281|GO:0006310|GO:0009378|GO:0009379 SRM_RS03200 f08c02c5b1aadeadc15be79e1a4af4d8 202 PANTHER PTHR33796 2 202 6.6E-65 T 22-04-2016 SRM_RS03200 f08c02c5b1aadeadc15be79e1a4af4d8 202 Hamap MF_00031 Holliday junction ATP-dependent DNA helicase RuvA [ruvA]. 1 201 27.422 T 22-04-2016 IPR000085 Bacterial DNA recombination protein RuvA GO:0003678|GO:0006281|GO:0006310 SRM_RS03200 f08c02c5b1aadeadc15be79e1a4af4d8 202 SUPERFAMILY SSF47781 65 134 6.12E-18 T 22-04-2016 IPR010994 RuvA domain 2-like Reactome: REACT_216 SRM_RS03200 f08c02c5b1aadeadc15be79e1a4af4d8 202 SUPERFAMILY SSF46929 153 198 6.02E-6 T 22-04-2016 IPR011114 DNA helicase, Holliday junction RuvA type, domain III, C-terminal GO:0005524|GO:0006281|GO:0006310|GO:0009378|GO:0009379 SRM_RS03200 f08c02c5b1aadeadc15be79e1a4af4d8 202 SMART SM00278 108 127 1.2 T 22-04-2016 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 SRM_RS03200 f08c02c5b1aadeadc15be79e1a4af4d8 202 SMART SM00278 73 92 130.0 T 22-04-2016 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 SRM_RS13260 311fd7a8539935d5964752846c47afff 316 Pfam PF01040 UbiA prenyltransferase family 51 295 1.7E-51 T 22-04-2016 IPR000537 UbiA prenyltransferase family GO:0004659|GO:0016021 SRM_RS13260 311fd7a8539935d5964752846c47afff 316 ProSitePatterns PS00943 UbiA prenyltransferase family signature. 89 111 - T 22-04-2016 IPR030470 UbiA prenyltransferase conserved site SRM_RS13260 311fd7a8539935d5964752846c47afff 316 PANTHER PTHR11048:SF3 37 312 4.2E-80 T 22-04-2016 SRM_RS13260 311fd7a8539935d5964752846c47afff 316 PANTHER PTHR11048 37 312 4.2E-80 T 22-04-2016 SRM_RS13260 311fd7a8539935d5964752846c47afff 316 TIGRFAM TIGR01473 cyoE_ctaB: protoheme IX farnesyltransferase 37 313 6.1E-77 T 22-04-2016 IPR006369 Protohaem IX farnesyltransferase GO:0008495|GO:0016021|GO:0048034 UniPathway: UPA00834 SRM_RS13260 311fd7a8539935d5964752846c47afff 316 Hamap MF_00154 Protoheme IX farnesyltransferase [cyoE]. 34 315 15.872 T 22-04-2016 IPR006369 Protohaem IX farnesyltransferase GO:0008495|GO:0016021|GO:0048034 UniPathway: UPA00834 SRM_RS01155 1c2e5fd059fd5142e37b2ba8b01f7da0 504 Hamap MF_00966 Glucose-6-phosphate 1-dehydrogenase [zwf]. 6 489 80.472 T 22-04-2016 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268|UniPathway: UPA00115 SRM_RS01155 1c2e5fd059fd5142e37b2ba8b01f7da0 504 TIGRFAM TIGR00871 zwf: glucose-6-phosphate dehydrogenase 6 485 2.2E-176 T 22-04-2016 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268|UniPathway: UPA00115 SRM_RS01155 1c2e5fd059fd5142e37b2ba8b01f7da0 504 Pfam PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain 10 188 1.1E-58 T 22-04-2016 IPR022674 Glucose-6-phosphate dehydrogenase, NAD-binding GO:0004345|GO:0006006|GO:0050661|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268|UniPathway: UPA00115 SRM_RS01155 1c2e5fd059fd5142e37b2ba8b01f7da0 504 Pfam PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain 190 484 4.9E-107 T 22-04-2016 IPR022675 Glucose-6-phosphate dehydrogenase, C-terminal GO:0004345|GO:0006006|GO:0050661|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268|UniPathway: UPA00115 SRM_RS01155 1c2e5fd059fd5142e37b2ba8b01f7da0 504 Gene3D G3DSA:3.40.50.720 4 187 5.1E-66 T 22-04-2016 IPR016040 NAD(P)-binding domain SRM_RS01155 1c2e5fd059fd5142e37b2ba8b01f7da0 504 SUPERFAMILY SSF51735 3 191 2.17E-59 T 22-04-2016 IPR016040 NAD(P)-binding domain SRM_RS01155 1c2e5fd059fd5142e37b2ba8b01f7da0 504 PANTHER PTHR23429:SF0 3 484 3.1E-217 T 22-04-2016 SRM_RS01155 1c2e5fd059fd5142e37b2ba8b01f7da0 504 SUPERFAMILY SSF55347 178 486 1.44E-106 T 22-04-2016 SRM_RS01155 1c2e5fd059fd5142e37b2ba8b01f7da0 504 PRINTS PR00079 Glucose-6-phosphate dehydrogenase signature 220 237 7.6E-49 T 22-04-2016 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268|UniPathway: UPA00115 SRM_RS01155 1c2e5fd059fd5142e37b2ba8b01f7da0 504 PRINTS PR00079 Glucose-6-phosphate dehydrogenase signature 326 352 7.6E-49 T 22-04-2016 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268|UniPathway: UPA00115 SRM_RS01155 1c2e5fd059fd5142e37b2ba8b01f7da0 504 PRINTS PR00079 Glucose-6-phosphate dehydrogenase signature 144 157 7.6E-49 T 22-04-2016 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268|UniPathway: UPA00115 SRM_RS01155 1c2e5fd059fd5142e37b2ba8b01f7da0 504 PRINTS PR00079 Glucose-6-phosphate dehydrogenase signature 168 196 7.6E-49 T 22-04-2016 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268|UniPathway: UPA00115 SRM_RS01155 1c2e5fd059fd5142e37b2ba8b01f7da0 504 PRINTS PR00079 Glucose-6-phosphate dehydrogenase signature 238 254 7.6E-49 T 22-04-2016 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268|UniPathway: UPA00115 SRM_RS01155 1c2e5fd059fd5142e37b2ba8b01f7da0 504 PIRSF PIRSF000110 1 493 4.9E-165 T 22-04-2016 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268|UniPathway: UPA00115 SRM_RS01155 1c2e5fd059fd5142e37b2ba8b01f7da0 504 ProSitePatterns PS00069 Glucose-6-phosphate dehydrogenase active site. 178 184 - T 22-04-2016 IPR019796 Glucose-6-phosphate dehydrogenase, active site GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268|UniPathway: UPA00115 SRM_RS01155 1c2e5fd059fd5142e37b2ba8b01f7da0 504 Gene3D G3DSA:3.30.360.10 188 485 2.0E-112 T 22-04-2016 SRM_RS01155 1c2e5fd059fd5142e37b2ba8b01f7da0 504 PANTHER PTHR23429 3 484 3.1E-217 T 22-04-2016 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268|UniPathway: UPA00115 SRM_RS10155 672a607eb94e51e53c3983247bc68b0b 237 TIGRFAM TIGR01169 rplA_bact: ribosomal protein uL1 6 231 7.5E-92 T 22-04-2016 IPR005878 Ribosomal protein L1, bacterial-type GO:0003723|GO:0003735|GO:0006412|GO:0015934 SRM_RS10155 672a607eb94e51e53c3983247bc68b0b 237 SUPERFAMILY SSF56808 20 229 1.57E-74 T 22-04-2016 IPR023674 Ribosomal protein L1-like SRM_RS10155 672a607eb94e51e53c3983247bc68b0b 237 PANTHER PTHR23105 25 235 1.8E-74 T 22-04-2016 SRM_RS10155 672a607eb94e51e53c3983247bc68b0b 237 PANTHER PTHR23105:SF5 25 235 1.8E-74 T 22-04-2016 SRM_RS10155 672a607eb94e51e53c3983247bc68b0b 237 ProSitePatterns PS01199 Ribosomal protein L1 signature. 124 142 - T 22-04-2016 IPR023673 Ribosomal protein L1, conserved site SRM_RS10155 672a607eb94e51e53c3983247bc68b0b 237 PIRSF PIRSF002155 2 230 2.8E-71 T 22-04-2016 IPR002143 Ribosomal protein L1 GO:0003723|GO:0003735|GO:0006412|GO:0015934 SRM_RS10155 672a607eb94e51e53c3983247bc68b0b 237 Hamap MF_01318_B 50S ribosomal protein L1 [rplA]. 2 232 41.334 T 22-04-2016 IPR005878 Ribosomal protein L1, bacterial-type GO:0003723|GO:0003735|GO:0006412|GO:0015934 SRM_RS10155 672a607eb94e51e53c3983247bc68b0b 237 Gene3D G3DSA:3.30.190.20 20 70 5.0E-40 T 22-04-2016 IPR016094 Ribosomal protein L1, 2-layer alpha/beta-sandwich GO:0003723 SRM_RS10155 672a607eb94e51e53c3983247bc68b0b 237 Gene3D G3DSA:3.30.190.20 164 228 5.0E-40 T 22-04-2016 IPR016094 Ribosomal protein L1, 2-layer alpha/beta-sandwich GO:0003723 SRM_RS10155 672a607eb94e51e53c3983247bc68b0b 237 Gene3D G3DSA:3.40.50.790 71 162 1.5E-39 T 22-04-2016 IPR016095 Ribosomal protein L1, 3-layer alpha/beta-sandwich SRM_RS10155 672a607eb94e51e53c3983247bc68b0b 237 Pfam PF00687 Ribosomal protein L1p/L10e family 34 223 1.4E-51 T 22-04-2016 IPR028364 Ribosomal protein L1/ribosomal biogenesis protein SRM_RS09715 6f6f6f7b127f7c3b88a996083ca029e8 663 ProSitePatterns PS00455 Putative AMP-binding domain signature. 268 279 - T 22-04-2016 IPR020845 AMP-binding, conserved site SRM_RS09715 6f6f6f7b127f7c3b88a996083ca029e8 663 Pfam PF16177 Acetyl-coenzyme A synthetase N-terminus 35 85 1.2E-15 T 22-04-2016 IPR032387 Acetyl-coenzyme A synthetase, N-terminal domain KEGG: 00010+6.2.1.1|KEGG: 00620+6.2.1.1|KEGG: 00640+6.2.1.1|KEGG: 00680+6.2.1.1|KEGG: 00720+6.2.1.1|MetaCyc: PWY-6672|MetaCyc: PWY-7118 SRM_RS09715 6f6f6f7b127f7c3b88a996083ca029e8 663 SUPERFAMILY SSF56801 41 658 3.4E-147 T 22-04-2016 SRM_RS09715 6f6f6f7b127f7c3b88a996083ca029e8 663 Gene3D G3DSA:3.40.50.980 82 273 4.2E-35 T 22-04-2016 SRM_RS09715 6f6f6f7b127f7c3b88a996083ca029e8 663 Gene3D G3DSA:3.40.50.980 274 436 1.2E-21 T 22-04-2016 SRM_RS09715 6f6f6f7b127f7c3b88a996083ca029e8 663 Pfam PF13193 AMP-binding enzyme C-terminal domain 548 626 4.0E-20 T 22-04-2016 IPR025110 AMP-binding enzyme C-terminal domain SRM_RS09715 6f6f6f7b127f7c3b88a996083ca029e8 663 Pfam PF00501 AMP-binding enzyme 87 539 3.4E-76 T 22-04-2016 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 SRM_RS09715 6f6f6f7b127f7c3b88a996083ca029e8 663 PANTHER PTHR24095 18 663 1.9E-215 T 22-04-2016 SRM_RS09715 6f6f6f7b127f7c3b88a996083ca029e8 663 Gene3D G3DSA:3.30.300.30 535 642 1.8E-22 T 22-04-2016 SRM_RS09715 6f6f6f7b127f7c3b88a996083ca029e8 663 Gene3D G3DSA:2.30.38.10 444 532 5.7E-7 T 22-04-2016 SRM_RS09715 6f6f6f7b127f7c3b88a996083ca029e8 663 TIGRFAM TIGR02188 Ac_CoA_lig_AcsA: acetate--CoA ligase 46 658 4.8E-240 T 22-04-2016 IPR011904 Acetate-CoA ligase GO:0003987|GO:0016208|GO:0019427 KEGG: 00010+6.2.1.1|KEGG: 00620+6.2.1.1|KEGG: 00640+6.2.1.1|KEGG: 00680+6.2.1.1|KEGG: 00720+6.2.1.1|MetaCyc: PWY-6672|MetaCyc: PWY-7118|Reactome: REACT_13433 SRM_RS15455 10e40581db710793cd74cba6dd4b0689 389 SUPERFAMILY SSF53187 304 388 2.63E-50 T 22-04-2016 SRM_RS15455 10e40581db710793cd74cba6dd4b0689 389 SUPERFAMILY SSF53187 5 181 2.63E-50 T 22-04-2016 SRM_RS15455 10e40581db710793cd74cba6dd4b0689 389 SUPERFAMILY SSF55031 182 288 5.98E-16 T 22-04-2016 IPR011650 Peptidase M20, dimerisation domain SRM_RS15455 10e40581db710793cd74cba6dd4b0689 389 PANTHER PTHR11014 1 389 2.1E-70 T 22-04-2016 SRM_RS15455 10e40581db710793cd74cba6dd4b0689 389 Gene3D G3DSA:3.30.70.360 191 287 2.5E-22 T 22-04-2016 IPR011650 Peptidase M20, dimerisation domain SRM_RS15455 10e40581db710793cd74cba6dd4b0689 389 Pfam PF01546 Peptidase family M20/M25/M40 81 385 7.6E-30 T 22-04-2016 IPR002933 Peptidase M20 GO:0008152|GO:0016787 SRM_RS15455 10e40581db710793cd74cba6dd4b0689 389 PANTHER PTHR11014:SF101 1 389 2.1E-70 T 22-04-2016 SRM_RS15455 10e40581db710793cd74cba6dd4b0689 389 Gene3D G3DSA:3.40.630.10 9 190 1.0E-59 T 22-04-2016 SRM_RS15455 10e40581db710793cd74cba6dd4b0689 389 Gene3D G3DSA:3.40.630.10 330 388 1.0E-59 T 22-04-2016 SRM_RS15455 10e40581db710793cd74cba6dd4b0689 389 Pfam PF07687 Peptidase dimerisation domain 180 287 2.6E-18 T 22-04-2016 IPR011650 Peptidase M20, dimerisation domain SRM_RS11950 03b82000eade094c14711bb7e242ee78 1140 Gene3D G3DSA:2.40.40.20 588 676 7.9E-8 T 22-04-2016 SRM_RS11950 03b82000eade094c14711bb7e242ee78 1140 Gene3D G3DSA:3.40.50.740 402 505 9.8E-10 T 22-04-2016 SRM_RS11950 03b82000eade094c14711bb7e242ee78 1140 Gene3D G3DSA:3.30.70.20 887 959 9.7E-38 T 22-04-2016 SRM_RS11950 03b82000eade094c14711bb7e242ee78 1140 Gene3D G3DSA:3.30.70.20 1031 1113 9.7E-38 T 22-04-2016 SRM_RS11950 03b82000eade094c14711bb7e242ee78 1140 SUPERFAMILY SSF54862 887 1122 5.86E-48 T 22-04-2016 SRM_RS11950 03b82000eade094c14711bb7e242ee78 1140 PANTHER PTHR11938 1061 1091 1.4E-34 T 22-04-2016 SRM_RS11950 03b82000eade094c14711bb7e242ee78 1140 PANTHER PTHR11938 943 1007 1.4E-34 T 22-04-2016 SRM_RS11950 03b82000eade094c14711bb7e242ee78 1140 PANTHER PTHR11938 1030 1045 1.4E-34 T 22-04-2016 SRM_RS11950 03b82000eade094c14711bb7e242ee78 1140 PANTHER PTHR11938 888 923 1.4E-34 T 22-04-2016 SRM_RS11950 03b82000eade094c14711bb7e242ee78 1140 SUPERFAMILY SSF53706 119 508 2.09E-26 T 22-04-2016 SRM_RS11950 03b82000eade094c14711bb7e242ee78 1140 Gene3D G3DSA:3.30.70.20 997 1019 9.0E-5 T 22-04-2016 SRM_RS11950 03b82000eade094c14711bb7e242ee78 1140 Pfam PF12838 4Fe-4S dicluster domain 897 972 2.6E-7 T 22-04-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain SRM_RS11950 03b82000eade094c14711bb7e242ee78 1140 Pfam PF12838 4Fe-4S dicluster domain 987 1075 3.3E-10 T 22-04-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain SRM_RS11950 03b82000eade094c14711bb7e242ee78 1140 Gene3D G3DSA:3.30.70.20 960 996 3.2E-16 T 22-04-2016 SRM_RS13510 cc9eaada6ed558f8737161f7c7647740 522 Gene3D G3DSA:3.40.50.2300 2 127 5.9E-35 T 22-04-2016 SRM_RS13510 cc9eaada6ed558f8737161f7c7647740 522 Pfam PF00072 Response regulator receiver domain 6 112 1.2E-25 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SRM_RS13510 cc9eaada6ed558f8737161f7c7647740 522 SUPERFAMILY SSF52172 1 139 2.85E-36 T 22-04-2016 IPR011006 CheY-like superfamily SRM_RS13510 cc9eaada6ed558f8737161f7c7647740 522 Pfam PF08665 PglZ domain 232 420 1.7E-23 T 22-04-2016 IPR013973 PglZ domain SRM_RS13510 cc9eaada6ed558f8737161f7c7647740 522 SMART SM00448 4 115 1.6E-25 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SRM_RS13510 cc9eaada6ed558f8737161f7c7647740 522 PANTHER PTHR24423 1 157 2.4E-28 T 22-04-2016 SRM_RS13510 cc9eaada6ed558f8737161f7c7647740 522 SUPERFAMILY SSF53649 376 518 1.96E-8 T 22-04-2016 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 SRM_RS13510 cc9eaada6ed558f8737161f7c7647740 522 SUPERFAMILY SSF53649 230 340 1.96E-8 T 22-04-2016 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 SRM_RS11725 2edc07f8970cc2fdc645332f4fdb2bf5 941 SUPERFAMILY SSF55785 24 158 7.78E-5 T 22-04-2016 IPR000014 PAS domain SRM_RS11725 2edc07f8970cc2fdc645332f4fdb2bf5 941 SUPERFAMILY SSF47384 557 624 1.2E-8 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SRM_RS11725 2edc07f8970cc2fdc645332f4fdb2bf5 941 PRINTS PR00344 Bacterial sensor protein C-terminal signature 752 770 1.7E-18 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SRM_RS11725 2edc07f8970cc2fdc645332f4fdb2bf5 941 PRINTS PR00344 Bacterial sensor protein C-terminal signature 739 749 1.7E-18 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SRM_RS11725 2edc07f8970cc2fdc645332f4fdb2bf5 941 PRINTS PR00344 Bacterial sensor protein C-terminal signature 776 789 1.7E-18 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SRM_RS11725 2edc07f8970cc2fdc645332f4fdb2bf5 941 PRINTS PR00344 Bacterial sensor protein C-terminal signature 721 735 1.7E-18 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SRM_RS11725 2edc07f8970cc2fdc645332f4fdb2bf5 941 SUPERFAMILY SSF55785 421 544 3.7E-27 T 22-04-2016 IPR000014 PAS domain SRM_RS11725 2edc07f8970cc2fdc645332f4fdb2bf5 941 Pfam PF00989 PAS fold 436 543 1.5E-15 T 22-04-2016 IPR013767 PAS fold GO:0006355 SRM_RS11725 2edc07f8970cc2fdc645332f4fdb2bf5 941 SMART SM00387 669 792 3.4E-34 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SRM_RS11725 2edc07f8970cc2fdc645332f4fdb2bf5 941 Pfam PF00072 Response regulator receiver domain 821 929 5.4E-28 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SRM_RS11725 2edc07f8970cc2fdc645332f4fdb2bf5 941 SMART SM00086 504 546 1.8E-8 T 22-04-2016 IPR001610 PAC motif SRM_RS11725 2edc07f8970cc2fdc645332f4fdb2bf5 941 SMART SM00086 120 162 200.0 T 22-04-2016 IPR001610 PAC motif SRM_RS11725 2edc07f8970cc2fdc645332f4fdb2bf5 941 SMART SM00086 253 296 5.3 T 22-04-2016 IPR001610 PAC motif SRM_RS11725 2edc07f8970cc2fdc645332f4fdb2bf5 941 SMART SM00388 561 628 1.4E-8 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SRM_RS11725 2edc07f8970cc2fdc645332f4fdb2bf5 941 PANTHER PTHR24423:SF458 420 938 4.6E-146 T 22-04-2016 SRM_RS11725 2edc07f8970cc2fdc645332f4fdb2bf5 941 PANTHER PTHR24423:SF458 91 157 4.6E-146 T 22-04-2016 SRM_RS11725 2edc07f8970cc2fdc645332f4fdb2bf5 941 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 669 790 4.1E-21 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SRM_RS11725 2edc07f8970cc2fdc645332f4fdb2bf5 941 SUPERFAMILY SSF55785 292 415 2.09E-16 T 22-04-2016 IPR000014 PAS domain SRM_RS11725 2edc07f8970cc2fdc645332f4fdb2bf5 941 Gene3D G3DSA:1.10.287.130 557 624 9.9E-6 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SRM_RS11725 2edc07f8970cc2fdc645332f4fdb2bf5 941 Gene3D G3DSA:3.30.565.10 632 790 1.0E-41 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SRM_RS11725 2edc07f8970cc2fdc645332f4fdb2bf5 941 SMART SM00091 174 239 0.63 T 22-04-2016 IPR000014 PAS domain SRM_RS11725 2edc07f8970cc2fdc645332f4fdb2bf5 941 SMART SM00091 22 88 270.0 T 22-04-2016 IPR000014 PAS domain SRM_RS11725 2edc07f8970cc2fdc645332f4fdb2bf5 941 SMART SM00091 308 383 0.2 T 22-04-2016 IPR000014 PAS domain SRM_RS11725 2edc07f8970cc2fdc645332f4fdb2bf5 941 SMART SM00091 432 499 8.9E-11 T 22-04-2016 IPR000014 PAS domain SRM_RS11725 2edc07f8970cc2fdc645332f4fdb2bf5 941 Pfam PF13188 PAS domain 24 60 0.0076 T 22-04-2016 IPR000014 PAS domain SRM_RS11725 2edc07f8970cc2fdc645332f4fdb2bf5 941 Gene3D G3DSA:3.30.450.20 423 544 1.1E-27 T 22-04-2016 SRM_RS11725 2edc07f8970cc2fdc645332f4fdb2bf5 941 SUPERFAMILY SSF55874 619 790 6.81E-40 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SRM_RS11725 2edc07f8970cc2fdc645332f4fdb2bf5 941 Gene3D G3DSA:3.30.450.20 300 422 3.3E-23 T 22-04-2016 SRM_RS11725 2edc07f8970cc2fdc645332f4fdb2bf5 941 SMART SM00448 819 929 1.0E-30 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SRM_RS11725 2edc07f8970cc2fdc645332f4fdb2bf5 941 SUPERFAMILY SSF52172 818 934 1.42E-35 T 22-04-2016 IPR011006 CheY-like superfamily SRM_RS11725 2edc07f8970cc2fdc645332f4fdb2bf5 941 PANTHER PTHR24423 420 938 4.6E-146 T 22-04-2016 SRM_RS11725 2edc07f8970cc2fdc645332f4fdb2bf5 941 PANTHER PTHR24423 91 157 4.6E-146 T 22-04-2016 SRM_RS11725 2edc07f8970cc2fdc645332f4fdb2bf5 941 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 308 430 1.7E-10 T 22-04-2016 IPR000014 PAS domain SRM_RS11725 2edc07f8970cc2fdc645332f4fdb2bf5 941 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 436 551 2.1E-22 T 22-04-2016 IPR000014 PAS domain SRM_RS11725 2edc07f8970cc2fdc645332f4fdb2bf5 941 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 173 303 1.1E-6 T 22-04-2016 IPR000014 PAS domain SRM_RS11725 2edc07f8970cc2fdc645332f4fdb2bf5 941 SUPERFAMILY SSF55785 160 294 4.51E-13 T 22-04-2016 IPR000014 PAS domain SRM_RS11725 2edc07f8970cc2fdc645332f4fdb2bf5 941 Pfam PF00512 His Kinase A (phospho-acceptor) domain 561 625 1.2E-7 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SRM_RS11725 2edc07f8970cc2fdc645332f4fdb2bf5 941 Gene3D G3DSA:3.40.50.2300 817 937 1.6E-36 T 22-04-2016 SRM_RS11725 2edc07f8970cc2fdc645332f4fdb2bf5 941 Gene3D G3DSA:3.30.450.20 24 158 2.8E-8 T 22-04-2016 SRM_RS11725 2edc07f8970cc2fdc645332f4fdb2bf5 941 Gene3D G3DSA:3.30.450.20 174 294 2.0E-14 T 22-04-2016 SRM_RS11725 2edc07f8970cc2fdc645332f4fdb2bf5 941 Pfam PF08448 PAS fold 183 297 1.9E-6 T 22-04-2016 IPR013656 PAS fold-4 SRM_RS11725 2edc07f8970cc2fdc645332f4fdb2bf5 941 Pfam PF08448 PAS fold 336 426 1.1E-11 T 22-04-2016 IPR013656 PAS fold-4 SRM_RS12515 a2c701b2e8761c704bc44cfd9ce6c763 353 SUPERFAMILY SSF51735 18 152 1.84E-28 T 22-04-2016 IPR016040 NAD(P)-binding domain SRM_RS12515 a2c701b2e8761c704bc44cfd9ce6c763 353 Gene3D G3DSA:3.40.50.720 17 152 1.7E-35 T 22-04-2016 IPR016040 NAD(P)-binding domain SRM_RS12515 a2c701b2e8761c704bc44cfd9ce6c763 353 Pfam PF01118 Semialdehyde dehydrogenase, NAD binding domain 18 151 6.6E-23 T 22-04-2016 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 SRM_RS12515 a2c701b2e8761c704bc44cfd9ce6c763 353 SMART SM00859 17 156 6.2E-35 T 22-04-2016 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 SRM_RS12515 a2c701b2e8761c704bc44cfd9ce6c763 353 PANTHER PTHR32338:SF8 18 152 1.4E-38 T 22-04-2016 SRM_RS12515 a2c701b2e8761c704bc44cfd9ce6c763 353 PANTHER PTHR32338 18 152 1.4E-38 T 22-04-2016 SRM_RS01795 717695fcc50c3a52692eaec22e4e9d61 125 Pfam PF01909 Nucleotidyltransferase domain 35 75 3.8E-8 T 22-04-2016 IPR002934 Polymerase, nucleotidyl transferase domain GO:0016779 SRM_RS01795 717695fcc50c3a52692eaec22e4e9d61 125 PANTHER PTHR33933:SF1 25 125 1.8E-17 T 22-04-2016 SRM_RS01795 717695fcc50c3a52692eaec22e4e9d61 125 Gene3D G3DSA:3.30.460.10 27 125 4.8E-21 T 22-04-2016 SRM_RS01795 717695fcc50c3a52692eaec22e4e9d61 125 PANTHER PTHR33933 25 125 1.8E-17 T 22-04-2016 SRM_RS01795 717695fcc50c3a52692eaec22e4e9d61 125 SUPERFAMILY SSF81301 22 125 1.15E-19 T 22-04-2016 SRM_RS06640 8611245d3f8fbe91852072b50770c2c2 156 TIGRFAM TIGR00114 lumazine-synth: 6,7-dimethyl-8-ribityllumazine synthase 15 150 2.0E-52 T 22-04-2016 IPR002180 6,7-dimethyl-8-ribityllumazine synthase GO:0009231|GO:0009349 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 SRM_RS06640 8611245d3f8fbe91852072b50770c2c2 156 Hamap MF_00178 6,7-dimethyl-8-ribityllumazine synthase [ribH]. 9 154 30.509 T 22-04-2016 IPR002180 6,7-dimethyl-8-ribityllumazine synthase GO:0009231|GO:0009349 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 SRM_RS06640 8611245d3f8fbe91852072b50770c2c2 156 PANTHER PTHR21058 5 155 7.0E-74 T 22-04-2016 IPR002180 6,7-dimethyl-8-ribityllumazine synthase GO:0009231|GO:0009349 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 SRM_RS06640 8611245d3f8fbe91852072b50770c2c2 156 Pfam PF00885 6,7-dimethyl-8-ribityllumazine synthase 14 151 1.2E-56 T 22-04-2016 IPR002180 6,7-dimethyl-8-ribityllumazine synthase GO:0009231|GO:0009349 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 SRM_RS06640 8611245d3f8fbe91852072b50770c2c2 156 Gene3D G3DSA:3.40.50.960 4 155 7.0E-64 T 22-04-2016 IPR002180 6,7-dimethyl-8-ribityllumazine synthase GO:0009231|GO:0009349 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 SRM_RS06640 8611245d3f8fbe91852072b50770c2c2 156 SUPERFAMILY SSF52121 5 154 1.26E-60 T 22-04-2016 IPR002180 6,7-dimethyl-8-ribityllumazine synthase GO:0009231|GO:0009349 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 SRM_RS09395 2d31a0480892d38d7beae9a5c1792ab9 691 SUPERFAMILY SSF49265 487 592 3.26E-6 T 22-04-2016 IPR003961 Fibronectin type III GO:0005515 SRM_RS09395 2d31a0480892d38d7beae9a5c1792ab9 691 SMART SM00060 489 589 3.7E-4 T 22-04-2016 IPR003961 Fibronectin type III GO:0005515 SRM_RS09395 2d31a0480892d38d7beae9a5c1792ab9 691 TIGRFAM TIGR04183 Por_Secre_tail: Por secretion system C-terminal sorting domain 621 689 5.9E-6 T 22-04-2016 IPR026444 Secretion system C-terminal sorting domain SRM_RS09395 2d31a0480892d38d7beae9a5c1792ab9 691 Gene3D G3DSA:2.40.10.10 227 376 9.9E-41 T 22-04-2016 SRM_RS09395 2d31a0480892d38d7beae9a5c1792ab9 691 Pfam PF08434 Calcium-activated chloride channel 478 604 7.3E-10 T 22-04-2016 IPR013642 Calcium-activated chloride channel protein SRM_RS09395 2d31a0480892d38d7beae9a5c1792ab9 691 Gene3D G3DSA:2.60.40.10 487 594 2.7E-10 T 22-04-2016 IPR013783 Immunoglobulin-like fold SRM_RS09395 2d31a0480892d38d7beae9a5c1792ab9 691 SUPERFAMILY SSF50494 200 447 2.45E-31 T 22-04-2016 IPR009003 Peptidase S1, PA clan SRM_RS09395 2d31a0480892d38d7beae9a5c1792ab9 691 PANTHER PTHR10579 479 592 6.0E-18 T 22-04-2016 SRM_RS09395 2d31a0480892d38d7beae9a5c1792ab9 691 Gene3D G3DSA:2.40.10.10 404 433 1.0E-4 T 22-04-2016 SRM_RS09395 2d31a0480892d38d7beae9a5c1792ab9 691 Pfam PF13365 Trypsin-like peptidase domain 236 423 3.8E-7 T 22-04-2016 SRM_RS08540 4f00b99801c91a4bda1d14315893bfa3 719 ProSitePatterns PS00166 Enoyl-CoA hydratase/isomerase signature. 110 130 - T 22-04-2016 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site GO:0003824|GO:0008152 SRM_RS08540 4f00b99801c91a4bda1d14315893bfa3 719 Gene3D G3DSA:1.10.1040.10 636 717 1.2E-18 T 22-04-2016 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 SRM_RS08540 4f00b99801c91a4bda1d14315893bfa3 719 Pfam PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain 320 498 5.3E-54 T 22-04-2016 IPR006176 3-hydroxyacyl-CoA dehydrogenase, NAD binding GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7726|UniPathway: UPA00659 SRM_RS08540 4f00b99801c91a4bda1d14315893bfa3 719 PANTHER PTHR23309 12 719 7.7E-248 T 22-04-2016 SRM_RS08540 4f00b99801c91a4bda1d14315893bfa3 719 Gene3D G3DSA:3.40.50.720 309 502 7.5E-54 T 22-04-2016 IPR016040 NAD(P)-binding domain SRM_RS08540 4f00b99801c91a4bda1d14315893bfa3 719 Pfam PF00378 Enoyl-CoA hydratase/isomerase 18 217 1.8E-32 T 22-04-2016 IPR001753 Crotonase superfamily GO:0003824|GO:0008152 SRM_RS08540 4f00b99801c91a4bda1d14315893bfa3 719 SUPERFAMILY SSF52096 9 306 2.42E-64 T 22-04-2016 IPR029045 ClpP/crotonase-like domain SRM_RS08540 4f00b99801c91a4bda1d14315893bfa3 719 PANTHER PTHR23309:SF21 12 719 7.7E-248 T 22-04-2016 SRM_RS08540 4f00b99801c91a4bda1d14315893bfa3 719 SUPERFAMILY SSF48179 627 718 2.38E-21 T 22-04-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 SRM_RS08540 4f00b99801c91a4bda1d14315893bfa3 719 Gene3D G3DSA:1.10.1040.10 503 596 4.9E-26 T 22-04-2016 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 SRM_RS08540 4f00b99801c91a4bda1d14315893bfa3 719 Gene3D G3DSA:3.90.226.10 242 306 2.1E-58 T 22-04-2016 IPR029045 ClpP/crotonase-like domain SRM_RS08540 4f00b99801c91a4bda1d14315893bfa3 719 Gene3D G3DSA:3.90.226.10 12 207 2.1E-58 T 22-04-2016 IPR029045 ClpP/crotonase-like domain SRM_RS08540 4f00b99801c91a4bda1d14315893bfa3 719 Pfam PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain 501 595 9.0E-27 T 22-04-2016 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7726|UniPathway: UPA00659 SRM_RS08540 4f00b99801c91a4bda1d14315893bfa3 719 SUPERFAMILY SSF48179 500 599 1.53E-27 T 22-04-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 SRM_RS08540 4f00b99801c91a4bda1d14315893bfa3 719 SUPERFAMILY SSF51735 317 500 3.78E-50 T 22-04-2016 IPR016040 NAD(P)-binding domain SRM_RS07070 76093e3cada19eb28300be6699c34f08 1243 PANTHER PTHR23152 5 99 0.0 T 22-04-2016 IPR011603 2-oxoglutarate dehydrogenase E1 component GO:0004591|GO:0006099|GO:0030976|GO:0055114 KEGG: 00020+1.2.4.2|KEGG: 00310+1.2.4.2|KEGG: 00380+1.2.4.2|MetaCyc: PWY-5084 SRM_RS07070 76093e3cada19eb28300be6699c34f08 1243 PANTHER PTHR23152 380 1243 0.0 T 22-04-2016 IPR011603 2-oxoglutarate dehydrogenase E1 component GO:0004591|GO:0006099|GO:0030976|GO:0055114 KEGG: 00020+1.2.4.2|KEGG: 00310+1.2.4.2|KEGG: 00380+1.2.4.2|MetaCyc: PWY-5084 SRM_RS07070 76093e3cada19eb28300be6699c34f08 1243 Pfam PF16870 2-oxoglutarate dehydrogenase C-terminal 1096 1241 9.1E-48 T 22-04-2016 IPR031717 Multifunctional 2-oxoglutarate metabolism enzyme, C-terminal KEGG: 00020+1.2.4.2|KEGG: 00310+1.2.4.2|KEGG: 00380+1.2.4.2|MetaCyc: PWY-5084 SRM_RS07070 76093e3cada19eb28300be6699c34f08 1243 Pfam PF00676 Dehydrogenase E1 component 502 831 2.1E-59 T 22-04-2016 IPR001017 Dehydrogenase, E1 component GO:0008152|GO:0016624 SRM_RS07070 76093e3cada19eb28300be6699c34f08 1243 SUPERFAMILY SSF52518 881 1097 4.32E-44 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold SRM_RS07070 76093e3cada19eb28300be6699c34f08 1243 Pfam PF16078 2-oxoglutarate dehydrogenase N-terminus 5 38 6.3E-13 T 22-04-2016 IPR032106 2-oxoglutarate dehydrogenase E1 component, N-terminal domain KEGG: 00020+1.2.4.2|KEGG: 00310+1.2.4.2|KEGG: 00380+1.2.4.2|MetaCyc: PWY-5084 SRM_RS07070 76093e3cada19eb28300be6699c34f08 1243 TIGRFAM TIGR00239 2oxo_dh_E1: oxoglutarate dehydrogenase (succinyl-transferring), E1 component 376 1240 0.0 T 22-04-2016 IPR011603 2-oxoglutarate dehydrogenase E1 component GO:0004591|GO:0006099|GO:0030976|GO:0055114 KEGG: 00020+1.2.4.2|KEGG: 00310+1.2.4.2|KEGG: 00380+1.2.4.2|MetaCyc: PWY-5084 SRM_RS07070 76093e3cada19eb28300be6699c34f08 1243 Pfam PF02779 Transketolase, pyrimidine binding domain 897 1092 5.0E-56 T 22-04-2016 IPR005475 Transketolase-like, pyrimidine-binding domain SRM_RS07070 76093e3cada19eb28300be6699c34f08 1243 Gene3D G3DSA:3.30.559.10 94 339 3.2E-49 T 22-04-2016 IPR023213 Chloramphenicol acetyltransferase-like domain SRM_RS07070 76093e3cada19eb28300be6699c34f08 1243 Gene3D G3DSA:3.40.50.970 896 1097 3.0E-19 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold SRM_RS07070 76093e3cada19eb28300be6699c34f08 1243 SUPERFAMILY SSF52518 416 832 9.16E-84 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold SRM_RS07070 76093e3cada19eb28300be6699c34f08 1243 SMART SM00861 898 1091 3.3E-54 T 22-04-2016 IPR005475 Transketolase-like, pyrimidine-binding domain SRM_RS07070 76093e3cada19eb28300be6699c34f08 1243 Pfam PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) 107 339 2.4E-46 T 22-04-2016 IPR001078 2-oxoacid dehydrogenase acyltransferase, catalytic domain GO:0008152|GO:0016746 SRM_RS07070 76093e3cada19eb28300be6699c34f08 1243 PANTHER PTHR23152:SF4 5 99 0.0 T 22-04-2016 SRM_RS07070 76093e3cada19eb28300be6699c34f08 1243 PANTHER PTHR23152:SF4 380 1243 0.0 T 22-04-2016 SRM_RS07070 76093e3cada19eb28300be6699c34f08 1243 Gene3D G3DSA:3.40.50.970 455 842 7.1E-76 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold SRM_RS07070 76093e3cada19eb28300be6699c34f08 1243 SUPERFAMILY SSF52777 97 339 2.49E-51 T 22-04-2016 SRM_RS07070 76093e3cada19eb28300be6699c34f08 1243 PIRSF PIRSF000157 2 1243 0.0 T 22-04-2016 IPR011603 2-oxoglutarate dehydrogenase E1 component GO:0004591|GO:0006099|GO:0030976|GO:0055114 KEGG: 00020+1.2.4.2|KEGG: 00310+1.2.4.2|KEGG: 00380+1.2.4.2|MetaCyc: PWY-5084 SRM_RS11740 746c95db9eaeeff558ca6ec925e886ad 1076 PRINTS PR00344 Bacterial sensor protein C-terminal signature 992 1006 5.9E-9 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SRM_RS11740 746c95db9eaeeff558ca6ec925e886ad 1076 PRINTS PR00344 Bacterial sensor protein C-terminal signature 1027 1045 5.9E-9 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SRM_RS11740 746c95db9eaeeff558ca6ec925e886ad 1076 PRINTS PR00344 Bacterial sensor protein C-terminal signature 1051 1064 5.9E-9 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SRM_RS11740 746c95db9eaeeff558ca6ec925e886ad 1076 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 957 1065 3.2E-23 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SRM_RS11740 746c95db9eaeeff558ca6ec925e886ad 1076 SUPERFAMILY SSF55874 899 1065 8.77E-41 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SRM_RS11740 746c95db9eaeeff558ca6ec925e886ad 1076 Pfam PF00512 His Kinase A (phospho-acceptor) domain 847 910 2.3E-14 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SRM_RS11740 746c95db9eaeeff558ca6ec925e886ad 1076 SUPERFAMILY SSF47384 830 910 2.94E-18 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SRM_RS11740 746c95db9eaeeff558ca6ec925e886ad 1076 Gene3D G3DSA:2.120.10.30 167 254 4.6E-8 T 22-04-2016 IPR011042 Six-bladed beta-propeller, TolB-like SRM_RS11740 746c95db9eaeeff558ca6ec925e886ad 1076 Gene3D G3DSA:2.120.10.30 298 332 4.6E-8 T 22-04-2016 IPR011042 Six-bladed beta-propeller, TolB-like SRM_RS11740 746c95db9eaeeff558ca6ec925e886ad 1076 Gene3D G3DSA:2.120.10.30 412 511 4.6E-8 T 22-04-2016 IPR011042 Six-bladed beta-propeller, TolB-like SRM_RS11740 746c95db9eaeeff558ca6ec925e886ad 1076 Gene3D G3DSA:3.30.565.10 913 1069 5.4E-43 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SRM_RS11740 746c95db9eaeeff558ca6ec925e886ad 1076 Pfam PF07495 Y_Y_Y domain 723 775 6.7E-8 T 22-04-2016 IPR011123 Two component regulator three Y SRM_RS11740 746c95db9eaeeff558ca6ec925e886ad 1076 SMART SM00388 846 910 2.5E-17 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SRM_RS11740 746c95db9eaeeff558ca6ec925e886ad 1076 SMART SM00387 956 1067 4.8E-32 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SRM_RS11740 746c95db9eaeeff558ca6ec925e886ad 1076 Gene3D G3DSA:1.10.287.130 838 905 2.4E-17 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SRM_RS11740 746c95db9eaeeff558ca6ec925e886ad 1076 SUPERFAMILY SSF69322 445 516 1.7E-9 T 22-04-2016 SRM_RS11740 746c95db9eaeeff558ca6ec925e886ad 1076 SUPERFAMILY SSF69322 203 342 1.7E-9 T 22-04-2016 SRM_RS14690 f787da577ea8dbd81da7a65464fcab9d 473 SUPERFAMILY SSF46689 423 468 1.25E-11 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 SRM_RS14690 f787da577ea8dbd81da7a65464fcab9d 473 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 435 452 3.0E-8 T 22-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 SRM_RS14690 f787da577ea8dbd81da7a65464fcab9d 473 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 452 472 3.0E-8 T 22-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 SRM_RS14690 f787da577ea8dbd81da7a65464fcab9d 473 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 36 49 - T 22-04-2016 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 SRM_RS14690 f787da577ea8dbd81da7a65464fcab9d 473 PANTHER PTHR32071 389 467 5.9E-138 T 22-04-2016 SRM_RS14690 f787da577ea8dbd81da7a65464fcab9d 473 PANTHER PTHR32071 10 263 5.9E-138 T 22-04-2016 SRM_RS14690 f787da577ea8dbd81da7a65464fcab9d 473 Pfam PF00158 Sigma-54 interaction domain 12 178 3.0E-68 T 22-04-2016 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 SRM_RS14690 f787da577ea8dbd81da7a65464fcab9d 473 Gene3D G3DSA:3.40.50.300 10 184 7.4E-55 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SRM_RS14690 f787da577ea8dbd81da7a65464fcab9d 473 Pfam PF02954 Bacterial regulatory protein, Fis family 428 467 3.3E-14 T 22-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 SRM_RS14690 f787da577ea8dbd81da7a65464fcab9d 473 SUPERFAMILY SSF52540 11 255 1.82E-69 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SRM_RS14690 f787da577ea8dbd81da7a65464fcab9d 473 SMART SM00382 32 175 3.1E-9 T 22-04-2016 IPR003593 AAA+ ATPase domain SRM_RS14690 f787da577ea8dbd81da7a65464fcab9d 473 Gene3D G3DSA:1.10.10.60 425 467 2.0E-17 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 SRM_RS14690 f787da577ea8dbd81da7a65464fcab9d 473 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 225 234 - T 22-04-2016 IPR025944 Sigma-54 interaction domain, conserved site SRM_RS14690 f787da577ea8dbd81da7a65464fcab9d 473 Gene3D G3DSA:1.10.8.60 185 259 1.5E-23 T 22-04-2016 SRM_RS01260 8b143a029146531f659953f1efbe886e 275 PANTHER PTHR30373:SF2 7 206 8.0E-40 T 22-04-2016 SRM_RS01260 8b143a029146531f659953f1efbe886e 275 PANTHER PTHR30373 7 206 8.0E-40 T 22-04-2016 SRM_RS01260 8b143a029146531f659953f1efbe886e 275 Pfam PF04536 Acid phosphatase of thylakoid lumen protein 46 169 6.7E-37 T 22-04-2016 IPR007621 TPM domain SRM_RS02555 70356ee9225f7a591c23a35e3d1ca28a 259 Gene3D G3DSA:1.10.760.10 97 206 2.4E-30 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 SRM_RS02555 70356ee9225f7a591c23a35e3d1ca28a 259 SUPERFAMILY SSF46626 80 198 2.78E-24 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 SRM_RS02555 70356ee9225f7a591c23a35e3d1ca28a 259 PANTHER PTHR35008 98 216 8.5E-19 T 22-04-2016 SRM_RS02555 70356ee9225f7a591c23a35e3d1ca28a 259 PANTHER PTHR35008:SF5 98 216 8.5E-19 T 22-04-2016 SRM_RS02555 70356ee9225f7a591c23a35e3d1ca28a 259 PRINTS PR00605 Class IC cytochrome C signature 104 115 1.3E-5 T 22-04-2016 IPR008168 Cytochrome c, class IC GO:0005506|GO:0009055 SRM_RS02555 70356ee9225f7a591c23a35e3d1ca28a 259 PRINTS PR00605 Class IC cytochrome C signature 156 178 1.3E-5 T 22-04-2016 IPR008168 Cytochrome c, class IC GO:0005506|GO:0009055 SRM_RS02555 70356ee9225f7a591c23a35e3d1ca28a 259 Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III 95 178 7.9E-13 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 SRM_RS07290 693221f08c43752c5f5f9d9b290e1ddf 248 Pfam PF00106 short chain dehydrogenase 8 199 1.6E-57 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SRM_RS07290 693221f08c43752c5f5f9d9b290e1ddf 248 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 83 94 9.1E-10 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SRM_RS07290 693221f08c43752c5f5f9d9b290e1ddf 248 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 136 144 9.1E-10 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SRM_RS07290 693221f08c43752c5f5f9d9b290e1ddf 248 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 156 175 9.1E-10 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SRM_RS07290 693221f08c43752c5f5f9d9b290e1ddf 248 PANTHER PTHR24322 156 187 3.0E-65 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SRM_RS07290 693221f08c43752c5f5f9d9b290e1ddf 248 PANTHER PTHR24322 12 140 3.0E-65 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SRM_RS07290 693221f08c43752c5f5f9d9b290e1ddf 248 Gene3D G3DSA:3.40.50.720 4 238 8.1E-71 T 22-04-2016 IPR016040 NAD(P)-binding domain SRM_RS07290 693221f08c43752c5f5f9d9b290e1ddf 248 SUPERFAMILY SSF51735 3 232 3.36E-69 T 22-04-2016 IPR016040 NAD(P)-binding domain SRM_RS07290 693221f08c43752c5f5f9d9b290e1ddf 248 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 8 192 3.7E-4 T 22-04-2016 SRM_RS07290 693221f08c43752c5f5f9d9b290e1ddf 248 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 9 26 7.0E-27 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SRM_RS07290 693221f08c43752c5f5f9d9b290e1ddf 248 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 83 94 7.0E-27 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SRM_RS07290 693221f08c43752c5f5f9d9b290e1ddf 248 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 156 175 7.0E-27 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SRM_RS07290 693221f08c43752c5f5f9d9b290e1ddf 248 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 177 194 7.0E-27 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SRM_RS07290 693221f08c43752c5f5f9d9b290e1ddf 248 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 130 146 7.0E-27 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SRM_RS07290 693221f08c43752c5f5f9d9b290e1ddf 248 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 143 171 - T 22-04-2016 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 SRM_RS07290 693221f08c43752c5f5f9d9b290e1ddf 248 PANTHER PTHR24322:SF413 156 187 3.0E-65 T 22-04-2016 SRM_RS07290 693221f08c43752c5f5f9d9b290e1ddf 248 PANTHER PTHR24322:SF413 12 140 3.0E-65 T 22-04-2016 SRM_RS08660 90718511c858b31a24bf8e5f8e43acb8 777 Gene3D G3DSA:2.120.10.90 497 757 1.2E-47 T 22-04-2016 SRM_RS08660 90718511c858b31a24bf8e5f8e43acb8 777 Pfam PF00521 DNA gyrase/topoisomerase IV, subunit A 28 471 4.4E-142 T 22-04-2016 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 SRM_RS08660 90718511c858b31a24bf8e5f8e43acb8 777 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 625 666 0.0098 T 22-04-2016 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal beta-pinwheel GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 SRM_RS08660 90718511c858b31a24bf8e5f8e43acb8 777 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 674 716 5.3E-8 T 22-04-2016 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal beta-pinwheel GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 SRM_RS08660 90718511c858b31a24bf8e5f8e43acb8 777 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 550 591 5.3 T 22-04-2016 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal beta-pinwheel GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 SRM_RS08660 90718511c858b31a24bf8e5f8e43acb8 777 SMART SM00434 7 464 1.7E-212 T 22-04-2016 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 SRM_RS08660 90718511c858b31a24bf8e5f8e43acb8 777 SUPERFAMILY SSF101904 501 757 1.44E-51 T 22-04-2016 SRM_RS08660 90718511c858b31a24bf8e5f8e43acb8 777 Gene3D G3DSA:3.90.199.10 27 234 8.1E-109 T 22-04-2016 IPR013758 DNA topoisomerase, type IIA, subunit A/ C-terminal, alpha-beta GO:0003677|GO:0003918|GO:0005524|GO:0006259|GO:0006265 SRM_RS08660 90718511c858b31a24bf8e5f8e43acb8 777 Gene3D G3DSA:3.90.199.10 333 398 8.1E-109 T 22-04-2016 IPR013758 DNA topoisomerase, type IIA, subunit A/ C-terminal, alpha-beta GO:0003677|GO:0003918|GO:0005524|GO:0006259|GO:0006265 SRM_RS08660 90718511c858b31a24bf8e5f8e43acb8 777 PANTHER PTHR10169 622 757 3.6E-213 T 22-04-2016 SRM_RS08660 90718511c858b31a24bf8e5f8e43acb8 777 PANTHER PTHR10169 5 597 3.6E-213 T 22-04-2016 SRM_RS08660 90718511c858b31a24bf8e5f8e43acb8 777 PANTHER PTHR10169:SF48 622 757 3.6E-213 T 22-04-2016 SRM_RS08660 90718511c858b31a24bf8e5f8e43acb8 777 PANTHER PTHR10169:SF48 5 597 3.6E-213 T 22-04-2016 SRM_RS08660 90718511c858b31a24bf8e5f8e43acb8 777 Gene3D G3DSA:3.30.1360.40 235 326 2.3E-23 T 22-04-2016 IPR024946 Arginine repressor C-terminal-like domain SRM_RS08660 90718511c858b31a24bf8e5f8e43acb8 777 SUPERFAMILY SSF56719 27 486 6.41E-152 T 22-04-2016 IPR013760 DNA topoisomerase, type IIA-like domain GO:0003918|GO:0005524 SRM_RS13140 7707a3b44f76270abfec88adbb7ed7ff 378 Pfam PF00850 Histone deacetylase domain 19 308 4.8E-76 T 22-04-2016 IPR023801 Histone deacetylase domain SRM_RS13140 7707a3b44f76270abfec88adbb7ed7ff 378 PRINTS PR01272 Acetoin utilisation ACUC protein signature 13 33 1.6E-11 T 22-04-2016 IPR003085 Acetoin utilization protein AcuC GO:0045149 UniPathway: UPA00040 SRM_RS13140 7707a3b44f76270abfec88adbb7ed7ff 378 PRINTS PR01272 Acetoin utilisation ACUC protein signature 305 324 1.6E-11 T 22-04-2016 IPR003085 Acetoin utilization protein AcuC GO:0045149 UniPathway: UPA00040 SRM_RS13140 7707a3b44f76270abfec88adbb7ed7ff 378 PRINTS PR01272 Acetoin utilisation ACUC protein signature 80 94 1.6E-11 T 22-04-2016 IPR003085 Acetoin utilization protein AcuC GO:0045149 UniPathway: UPA00040 SRM_RS13140 7707a3b44f76270abfec88adbb7ed7ff 378 PRINTS PR01272 Acetoin utilisation ACUC protein signature 341 360 1.6E-11 T 22-04-2016 IPR003085 Acetoin utilization protein AcuC GO:0045149 UniPathway: UPA00040 SRM_RS13140 7707a3b44f76270abfec88adbb7ed7ff 378 PRINTS PR01272 Acetoin utilisation ACUC protein signature 101 114 1.6E-11 T 22-04-2016 IPR003085 Acetoin utilization protein AcuC GO:0045149 UniPathway: UPA00040 SRM_RS13140 7707a3b44f76270abfec88adbb7ed7ff 378 Gene3D G3DSA:3.40.800.20 4 345 3.5E-90 T 22-04-2016 IPR023801 Histone deacetylase domain SRM_RS13140 7707a3b44f76270abfec88adbb7ed7ff 378 PANTHER PTHR10625 6 327 1.9E-93 T 22-04-2016 IPR000286 Histone deacetylase superfamily SRM_RS13140 7707a3b44f76270abfec88adbb7ed7ff 378 PRINTS PR01270 Histone deacetylase superfamily signature 242 252 2.5E-20 T 22-04-2016 IPR000286 Histone deacetylase superfamily SRM_RS13140 7707a3b44f76270abfec88adbb7ed7ff 378 PRINTS PR01270 Histone deacetylase superfamily signature 124 147 2.5E-20 T 22-04-2016 IPR000286 Histone deacetylase superfamily SRM_RS13140 7707a3b44f76270abfec88adbb7ed7ff 378 PRINTS PR01270 Histone deacetylase superfamily signature 156 171 2.5E-20 T 22-04-2016 IPR000286 Histone deacetylase superfamily SRM_RS13140 7707a3b44f76270abfec88adbb7ed7ff 378 SUPERFAMILY SSF52768 4 340 5.76E-96 T 22-04-2016 SRM_RS13940 6afd1fb7cb962f7beee52066b7d5b322 256 Pfam PF00005 ABC transporter 17 166 1.1E-31 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 SRM_RS13940 6afd1fb7cb962f7beee52066b7d5b322 256 ProSitePatterns PS00211 ABC transporters family signature. 138 152 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 SRM_RS13940 6afd1fb7cb962f7beee52066b7d5b322 256 SUPERFAMILY SSF52540 1 227 2.11E-67 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SRM_RS13940 6afd1fb7cb962f7beee52066b7d5b322 256 Gene3D G3DSA:3.40.50.300 1 225 6.2E-72 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SRM_RS13940 6afd1fb7cb962f7beee52066b7d5b322 256 PANTHER PTHR24220:SF567 3 241 2.8E-111 T 22-04-2016 SRM_RS13940 6afd1fb7cb962f7beee52066b7d5b322 256 SMART SM00382 26 216 1.4E-12 T 22-04-2016 IPR003593 AAA+ ATPase domain SRM_RS13940 6afd1fb7cb962f7beee52066b7d5b322 256 PANTHER PTHR24220 3 241 2.8E-111 T 22-04-2016 SRM_RS01050 34cf949b790434347afd63466cc4d665 215 Gene3D G3DSA:3.40.50.150 4 198 7.7E-41 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SRM_RS01050 34cf949b790434347afd63466cc4d665 215 SUPERFAMILY SSF53335 9 150 1.25E-23 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SRM_RS01050 34cf949b790434347afd63466cc4d665 215 Pfam PF02527 rRNA small subunit methyltransferase G 16 181 8.2E-25 T 22-04-2016 IPR003682 rRNA small subunit methyltransferase G GO:0005737|GO:0006364|GO:0008649 SRM_RS01050 34cf949b790434347afd63466cc4d665 215 PANTHER PTHR31760 11 214 4.3E-35 T 22-04-2016 SRM_RS01050 34cf949b790434347afd63466cc4d665 215 PIRSF PIRSF003078 4 215 9.3E-30 T 22-04-2016 IPR003682 rRNA small subunit methyltransferase G GO:0005737|GO:0006364|GO:0008649 SRM_RS01050 34cf949b790434347afd63466cc4d665 215 Hamap MF_00074 Ribosomal RNA small subunit methyltransferase G [rsmG]. 9 196 19.572 T 22-04-2016 IPR003682 rRNA small subunit methyltransferase G GO:0005737|GO:0006364|GO:0008649 SRM_RS01050 34cf949b790434347afd63466cc4d665 215 PANTHER PTHR31760:SF0 11 214 4.3E-35 T 22-04-2016 SRM_RS08020 3c0971571fe31d4452b64f628cc084bc 322 PANTHER PTHR13929:SF0 2 319 4.6E-69 T 22-04-2016 SRM_RS08020 3c0971571fe31d4452b64f628cc084bc 322 PIRSF PIRSF005355 22 322 1.8E-77 T 22-04-2016 IPR026046 UbiA prenyltransferase domain containing protein 1 GO:0004659 SRM_RS08020 3c0971571fe31d4452b64f628cc084bc 322 PANTHER PTHR13929 2 319 4.6E-69 T 22-04-2016 SRM_RS08020 3c0971571fe31d4452b64f628cc084bc 322 Hamap MF_01937 1,4-dihydroxy-2-naphthoate octaprenyltransferase [menA]. 30 320 20.96 T 22-04-2016 IPR004657 1,4-dihydroxy-2-naphthoate octaprenyltransferase GO:0009234|GO:0016021|GO:0046428 KEGG: 00130+2.5.1.74|MetaCyc: PWY-5839|MetaCyc: PWY-5851|MetaCyc: PWY-5852|MetaCyc: PWY-5853|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895|UniPathway: UPA00079 SRM_RS08020 3c0971571fe31d4452b64f628cc084bc 322 TIGRFAM TIGR00751 menA: 1,4-dihydroxy-2-naphthoate octaprenyltransferase 39 319 6.6E-65 T 22-04-2016 SRM_RS08020 3c0971571fe31d4452b64f628cc084bc 322 Pfam PF01040 UbiA prenyltransferase family 47 297 1.3E-32 T 22-04-2016 IPR000537 UbiA prenyltransferase family GO:0004659|GO:0016021 SRM_RS05920 85016b9fd36c7c49cf1409f6eb3489e4 233 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 23 36 2.5E-6 T 22-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 SRM_RS05920 85016b9fd36c7c49cf1409f6eb3489e4 233 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 44 67 2.5E-6 T 22-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 SRM_RS05920 85016b9fd36c7c49cf1409f6eb3489e4 233 Gene3D G3DSA:1.10.357.10 10 224 4.0E-42 T 22-04-2016 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 SRM_RS05920 85016b9fd36c7c49cf1409f6eb3489e4 233 Pfam PF00440 Bacterial regulatory proteins, tetR family 24 70 1.6E-16 T 22-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 SRM_RS05920 85016b9fd36c7c49cf1409f6eb3489e4 233 PANTHER PTHR30055 5 196 2.4E-30 T 22-04-2016 SRM_RS05920 85016b9fd36c7c49cf1409f6eb3489e4 233 SUPERFAMILY SSF46689 10 89 1.9E-19 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 SRM_RS05920 85016b9fd36c7c49cf1409f6eb3489e4 233 SUPERFAMILY SSF48498 97 226 4.89E-12 T 22-04-2016 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal SRM_RS05485 69179cdd2bc8701c3560dd6fb65d834b 1152 TIGRFAM TIGR02456 treS_nterm: trehalose synthase 37 578 1.2E-270 T 22-04-2016 IPR012810 Trehalose synthase/alpha-amylase, N-terminal GO:0003824|GO:0005975 KEGG: 00500+5.4.99.16|MetaCyc: PWY-2622 SRM_RS05485 69179cdd2bc8701c3560dd6fb65d834b 1152 Pfam PF16657 Maltogenic Amylase, C-terminal domain 497 575 5.1E-23 T 22-04-2016 IPR032091 Maltogenic Amylase, C-terminal SRM_RS05485 69179cdd2bc8701c3560dd6fb65d834b 1152 SMART SM00642 45 443 5.8E-104 T 22-04-2016 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 SRM_RS05485 69179cdd2bc8701c3560dd6fb65d834b 1152 SUPERFAMILY SSF51011 502 578 1.08E-15 T 22-04-2016 SRM_RS05485 69179cdd2bc8701c3560dd6fb65d834b 1152 SUPERFAMILY SSF51445 35 359 3.11E-122 T 22-04-2016 IPR017853 Glycoside hydrolase superfamily SRM_RS05485 69179cdd2bc8701c3560dd6fb65d834b 1152 SUPERFAMILY SSF51445 386 491 3.11E-122 T 22-04-2016 IPR017853 Glycoside hydrolase superfamily SRM_RS05485 69179cdd2bc8701c3560dd6fb65d834b 1152 PANTHER PTHR10357 33 433 5.8E-238 T 22-04-2016 IPR015902 Glycoside hydrolase, family 13 GO:0003824 SRM_RS05485 69179cdd2bc8701c3560dd6fb65d834b 1152 SUPERFAMILY SSF56112 762 811 1.31E-9 T 22-04-2016 IPR011009 Protein kinase-like domain SRM_RS05485 69179cdd2bc8701c3560dd6fb65d834b 1152 SUPERFAMILY SSF56112 880 1107 1.31E-9 T 22-04-2016 IPR011009 Protein kinase-like domain SRM_RS05485 69179cdd2bc8701c3560dd6fb65d834b 1152 PANTHER PTHR10357 472 599 5.8E-238 T 22-04-2016 IPR015902 Glycoside hydrolase, family 13 GO:0003824 SRM_RS05485 69179cdd2bc8701c3560dd6fb65d834b 1152 Gene3D G3DSA:2.60.40.1180 497 578 1.2E-17 T 22-04-2016 IPR013780 Glycosyl hydrolase, all-beta SRM_RS05485 69179cdd2bc8701c3560dd6fb65d834b 1152 Pfam PF00128 Alpha amylase, catalytic domain 60 417 9.7E-72 T 22-04-2016 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 SRM_RS05485 69179cdd2bc8701c3560dd6fb65d834b 1152 PANTHER PTHR10357:SF164 33 433 5.8E-238 T 22-04-2016 SRM_RS05485 69179cdd2bc8701c3560dd6fb65d834b 1152 PANTHER PTHR10357:SF164 472 599 5.8E-238 T 22-04-2016 SRM_RS05485 69179cdd2bc8701c3560dd6fb65d834b 1152 Gene3D G3DSA:3.90.400.10 137 203 1.9E-23 T 22-04-2016 SRM_RS05485 69179cdd2bc8701c3560dd6fb65d834b 1152 Gene3D G3DSA:3.20.20.80 211 442 2.6E-102 T 22-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 SRM_RS05485 69179cdd2bc8701c3560dd6fb65d834b 1152 Gene3D G3DSA:3.20.20.80 39 136 2.6E-102 T 22-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 SRM_RS05485 69179cdd2bc8701c3560dd6fb65d834b 1152 Gene3D G3DSA:3.20.20.80 475 489 2.6E-102 T 22-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 SRM_RS07465 79e97c3a5ddf1484255b3baab23f4edf 736 Gene3D G3DSA:3.30.830.10 286 468 3.2E-34 T 22-04-2016 IPR011237 Peptidase M16 domain GO:0046872 SRM_RS07465 79e97c3a5ddf1484255b3baab23f4edf 736 SUPERFAMILY SSF63411 50 271 2.83E-47 T 22-04-2016 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 SRM_RS07465 79e97c3a5ddf1484255b3baab23f4edf 736 PANTHER PTHR11851 53 476 5.9E-99 T 22-04-2016 SRM_RS07465 79e97c3a5ddf1484255b3baab23f4edf 736 SUPERFAMILY SSF63411 275 492 1.2E-45 T 22-04-2016 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 SRM_RS07465 79e97c3a5ddf1484255b3baab23f4edf 736 Pfam PF00675 Insulinase (Peptidase family M16) 71 197 7.2E-11 T 22-04-2016 IPR011765 Peptidase M16, N-terminal SRM_RS07465 79e97c3a5ddf1484255b3baab23f4edf 736 Gene3D G3DSA:3.30.830.10 54 276 2.2E-44 T 22-04-2016 IPR011237 Peptidase M16 domain GO:0046872 SRM_RS07465 79e97c3a5ddf1484255b3baab23f4edf 736 PANTHER PTHR11851:SF140 53 476 5.9E-99 T 22-04-2016 SRM_RS07465 79e97c3a5ddf1484255b3baab23f4edf 736 Pfam PF05193 Peptidase M16 inactive domain 222 401 6.9E-32 T 22-04-2016 IPR007863 Peptidase M16, C-terminal SRM_RS03440 0d6af5afae66998ffa124e3ba7a2e191 434 SUPERFAMILY SSF53223 20 200 7.68E-67 T 22-04-2016 SRM_RS03440 0d6af5afae66998ffa124e3ba7a2e191 434 ProSitePatterns PS00074 Glu / Leu / Phe / Val dehydrogenases active site. 117 130 - T 22-04-2016 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase GO:0006520|GO:0016491|GO:0055114 SRM_RS03440 0d6af5afae66998ffa124e3ba7a2e191 434 PRINTS PR00082 Glutamate/leucine/phenylalanine/valine dehydrogenase signature 359 370 3.9E-33 T 22-04-2016 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase GO:0006520|GO:0016491|GO:0055114 SRM_RS03440 0d6af5afae66998ffa124e3ba7a2e191 434 PRINTS PR00082 Glutamate/leucine/phenylalanine/valine dehydrogenase signature 109 123 3.9E-33 T 22-04-2016 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase GO:0006520|GO:0016491|GO:0055114 SRM_RS03440 0d6af5afae66998ffa124e3ba7a2e191 434 PRINTS PR00082 Glutamate/leucine/phenylalanine/valine dehydrogenase signature 189 211 3.9E-33 T 22-04-2016 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase GO:0006520|GO:0016491|GO:0055114 SRM_RS03440 0d6af5afae66998ffa124e3ba7a2e191 434 PRINTS PR00082 Glutamate/leucine/phenylalanine/valine dehydrogenase signature 231 251 3.9E-33 T 22-04-2016 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase GO:0006520|GO:0016491|GO:0055114 SRM_RS03440 0d6af5afae66998ffa124e3ba7a2e191 434 PANTHER PTHR11606 24 432 6.2E-173 T 22-04-2016 SRM_RS03440 0d6af5afae66998ffa124e3ba7a2e191 434 SMART SM00839 200 431 3.9E-89 T 22-04-2016 IPR006096 Glutamate/phenylalanine/leucine/valine dehydrogenase, C-terminal GO:0006520|GO:0016491|GO:0055114 SRM_RS03440 0d6af5afae66998ffa124e3ba7a2e191 434 Gene3D G3DSA:3.40.192.10 58 195 1.3E-55 T 22-04-2016 SRM_RS03440 0d6af5afae66998ffa124e3ba7a2e191 434 Pfam PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase 198 431 1.5E-71 T 22-04-2016 IPR006096 Glutamate/phenylalanine/leucine/valine dehydrogenase, C-terminal GO:0006520|GO:0016491|GO:0055114 SRM_RS03440 0d6af5afae66998ffa124e3ba7a2e191 434 Pfam PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain 53 180 6.1E-54 T 22-04-2016 IPR006097 Glutamate/phenylalanine/leucine/valine dehydrogenase, dimerisation domain GO:0006520|GO:0016491|GO:0055114 SRM_RS03440 0d6af5afae66998ffa124e3ba7a2e191 434 PIRSF PIRSF000185 20 434 1.8E-166 T 22-04-2016 IPR014362 Glutamate dehydrogenase GO:0016639|GO:0055114 SRM_RS03440 0d6af5afae66998ffa124e3ba7a2e191 434 Gene3D G3DSA:3.40.50.720 198 433 3.4E-80 T 22-04-2016 IPR016040 NAD(P)-binding domain SRM_RS03440 0d6af5afae66998ffa124e3ba7a2e191 434 SUPERFAMILY SSF51735 198 433 7.52E-74 T 22-04-2016 IPR016040 NAD(P)-binding domain SRM_RS01650 7edff5c3c1492c109eccba55ac839d88 187 Pfam PF00801 PKD domain 109 173 4.3E-8 T 22-04-2016 IPR000601 PKD domain SRM_RS01650 7edff5c3c1492c109eccba55ac839d88 187 SMART SM00089 103 184 1.2E-7 T 22-04-2016 IPR022409 PKD/Chitinase domain SRM_RS01650 7edff5c3c1492c109eccba55ac839d88 187 Gene3D G3DSA:2.60.40.670 108 181 7.8E-11 T 22-04-2016 IPR000601 PKD domain SRM_RS01650 7edff5c3c1492c109eccba55ac839d88 187 SUPERFAMILY SSF49299 64 176 2.22E-11 T 22-04-2016 IPR000601 PKD domain SRM_RS08355 beb829caa7849e4b55ed26dd7179135b 201 Pfam PF12766 Pyridoxamine 5'-phosphate oxidase 17 103 2.1E-14 T 22-04-2016 IPR024624 Pyridoxamine 5'-phosphate oxidase, Alr4036 family, FMN-binding domain GO:0010181 SRM_RS08355 beb829caa7849e4b55ed26dd7179135b 201 Gene3D G3DSA:2.30.110.10 7 201 7.8E-42 T 22-04-2016 IPR012349 FMN-binding split barrel GO:0010181|GO:0016491|GO:0055114 UniPathway: UPA00647 SRM_RS08355 beb829caa7849e4b55ed26dd7179135b 201 SUPERFAMILY SSF50475 9 201 1.46E-29 T 22-04-2016 IPR012349 FMN-binding split barrel GO:0010181|GO:0016491|GO:0055114 UniPathway: UPA00647 SRM_RS02620 392c4118e1e50ab85519da3dcd8f919b 270 Pfam PF02673 Bacitracin resistance protein BacA 6 264 1.4E-60 T 22-04-2016 IPR003824 Undecaprenyl-diphosphatase UppP GO:0016020|GO:0016311|GO:0050380 KEGG: 00550+3.6.1.27|MetaCyc: PWY-5785 SRM_RS02620 392c4118e1e50ab85519da3dcd8f919b 270 PANTHER PTHR30622 1 270 1.4E-70 T 22-04-2016 SRM_RS02620 392c4118e1e50ab85519da3dcd8f919b 270 Hamap MF_01006 Undecaprenyl-diphosphatase [uppP]. 1 270 15.065 T 22-04-2016 IPR003824 Undecaprenyl-diphosphatase UppP GO:0016020|GO:0016311|GO:0050380 KEGG: 00550+3.6.1.27|MetaCyc: PWY-5785 SRM_RS14205 798035c85100bfeb6f0816d9e8246d8a 256 ProSitePatterns PS01313 Lipoate-protein ligase B signature. 88 103 - T 22-04-2016 IPR020605 Octanoyltransferase, conserved site GO:0005737|GO:0009107|GO:0016415 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382|UniPathway: UPA00538 SRM_RS14205 798035c85100bfeb6f0816d9e8246d8a 256 PANTHER PTHR10993 9 246 1.6E-89 T 22-04-2016 SRM_RS14205 798035c85100bfeb6f0816d9e8246d8a 256 TIGRFAM TIGR00214 lipB: lipoyl(octanoyl) transferase 49 227 2.7E-48 T 22-04-2016 IPR000544 Octanoyltransferase GO:0005737|GO:0009107|GO:0016415 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382|UniPathway: UPA00538 SRM_RS14205 798035c85100bfeb6f0816d9e8246d8a 256 PIRSF PIRSF016262 4 239 2.0E-61 T 22-04-2016 IPR000544 Octanoyltransferase GO:0005737|GO:0009107|GO:0016415 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382|UniPathway: UPA00538 SRM_RS14205 798035c85100bfeb6f0816d9e8246d8a 256 SUPERFAMILY SSF55681 7 229 2.24E-66 T 22-04-2016 SRM_RS14205 798035c85100bfeb6f0816d9e8246d8a 256 Gene3D G3DSA:3.90.1550.10 6 227 9.7E-73 T 22-04-2016 SRM_RS14205 798035c85100bfeb6f0816d9e8246d8a 256 Hamap MF_00013 Octanoyltransferase [lipB]. 8 230 33.345 T 22-04-2016 IPR000544 Octanoyltransferase GO:0005737|GO:0009107|GO:0016415 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382|UniPathway: UPA00538 SRM_RS14205 798035c85100bfeb6f0816d9e8246d8a 256 ProDom PD006086 LIGASE LIPOATE-PROTEIN B TRANSFERASE ACYLTRANSFERASE LIPOYLTRANSFERASE LIPOYL-ACYL-CARRIER 2.3.1.- PROTEIN-PROTEIN- N-LIPOYLTRANSFERASE 92 133 2.0E-8 T 22-04-2016 SRM_RS14205 798035c85100bfeb6f0816d9e8246d8a 256 Pfam PF03099 Biotin/lipoate A/B protein ligase family 71 182 3.0E-6 T 22-04-2016 IPR004143 Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL), catalytic domain GO:0006464 SRM_RS04955 19ac674b665b1a8d7dcca9cd88b31339 162 Gene3D G3DSA:1.10.10.10 1 142 8.4E-26 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SRM_RS04955 19ac674b665b1a8d7dcca9cd88b31339 162 ProSitePatterns PS01332 Rrf2-type HTH domain signature. 61 79 - T 22-04-2016 IPR030489 Transcription regulator Rrf2-type, conserved site SRM_RS04955 19ac674b665b1a8d7dcca9cd88b31339 162 SUPERFAMILY SSF46785 3 142 6.18E-25 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SRM_RS04955 19ac674b665b1a8d7dcca9cd88b31339 162 PANTHER PTHR33221 3 142 3.1E-26 T 22-04-2016 SRM_RS04955 19ac674b665b1a8d7dcca9cd88b31339 162 Pfam PF02082 Transcriptional regulator 1 95 3.5E-18 T 22-04-2016 IPR000944 Transcription regulator Rrf2-type SRM_RS04955 19ac674b665b1a8d7dcca9cd88b31339 162 TIGRFAM TIGR00738 rrf2_super: Rrf2 family protein 1 142 2.5E-26 T 22-04-2016 IPR000944 Transcription regulator Rrf2-type SRM_RS14475 d8603852aa54af6f4382f04f1780c683 292 SMART SM00138 13 280 2.5E-92 T 22-04-2016 IPR000780 MCP methyltransferase, CheR-type GO:0008757 SRM_RS14475 d8603852aa54af6f4382f04f1780c683 292 PRINTS PR00996 Glutamate methyltransferase family signature 239 262 1.1E-39 T 22-04-2016 IPR000780 MCP methyltransferase, CheR-type GO:0008757 SRM_RS14475 d8603852aa54af6f4382f04f1780c683 292 PRINTS PR00996 Glutamate methyltransferase family signature 35 48 1.1E-39 T 22-04-2016 IPR000780 MCP methyltransferase, CheR-type GO:0008757 SRM_RS14475 d8603852aa54af6f4382f04f1780c683 292 PRINTS PR00996 Glutamate methyltransferase family signature 115 135 1.1E-39 T 22-04-2016 IPR000780 MCP methyltransferase, CheR-type GO:0008757 SRM_RS14475 d8603852aa54af6f4382f04f1780c683 292 PRINTS PR00996 Glutamate methyltransferase family signature 73 85 1.1E-39 T 22-04-2016 IPR000780 MCP methyltransferase, CheR-type GO:0008757 SRM_RS14475 d8603852aa54af6f4382f04f1780c683 292 PRINTS PR00996 Glutamate methyltransferase family signature 151 167 1.1E-39 T 22-04-2016 IPR000780 MCP methyltransferase, CheR-type GO:0008757 SRM_RS14475 d8603852aa54af6f4382f04f1780c683 292 PRINTS PR00996 Glutamate methyltransferase family signature 220 234 1.1E-39 T 22-04-2016 IPR000780 MCP methyltransferase, CheR-type GO:0008757 SRM_RS14475 d8603852aa54af6f4382f04f1780c683 292 Gene3D G3DSA:3.40.50.150 79 276 3.7E-65 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SRM_RS14475 d8603852aa54af6f4382f04f1780c683 292 Pfam PF01739 CheR methyltransferase, SAM binding domain 80 266 7.6E-59 T 22-04-2016 IPR022642 MCP methyltransferase, CheR-type, SAM-binding domain, C-terminal SRM_RS14475 d8603852aa54af6f4382f04f1780c683 292 SUPERFAMILY SSF53335 80 274 5.86E-52 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SRM_RS14475 d8603852aa54af6f4382f04f1780c683 292 Pfam PF03705 CheR methyltransferase, all-alpha domain 15 64 3.4E-15 T 22-04-2016 IPR022641 Chemotaxis receptor methyltransferase CheR, N-terminal SRM_RS14475 d8603852aa54af6f4382f04f1780c683 292 PANTHER PTHR24422 6 283 7.8E-83 T 22-04-2016 SRM_RS14475 d8603852aa54af6f4382f04f1780c683 292 PIRSF PIRSF000410 1 284 3.4E-79 T 22-04-2016 IPR026024 Chemotaxis protein methyltransferase CheR SRM_RS14475 d8603852aa54af6f4382f04f1780c683 292 Gene3D G3DSA:1.10.155.10 7 78 3.6E-19 T 22-04-2016 IPR022641 Chemotaxis receptor methyltransferase CheR, N-terminal SRM_RS14475 d8603852aa54af6f4382f04f1780c683 292 SUPERFAMILY SSF47757 7 79 1.22E-15 T 22-04-2016 IPR022641 Chemotaxis receptor methyltransferase CheR, N-terminal SRM_RS11995 741c883e46c6dec163dd4bea9242d329 199 PANTHER PTHR11839:SF9 15 193 2.0E-47 T 22-04-2016 SRM_RS11995 741c883e46c6dec163dd4bea9242d329 199 Pfam PF00293 NUDIX domain 59 169 2.8E-15 T 22-04-2016 IPR000086 NUDIX hydrolase domain GO:0016787 SRM_RS11995 741c883e46c6dec163dd4bea9242d329 199 SUPERFAMILY SSF55811 23 192 1.27E-45 T 22-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 SRM_RS11995 741c883e46c6dec163dd4bea9242d329 199 PANTHER PTHR11839 15 193 2.0E-47 T 22-04-2016 SRM_RS11995 741c883e46c6dec163dd4bea9242d329 199 Gene3D G3DSA:3.90.79.10 22 193 3.8E-53 T 22-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 SRM_RS03585 f4d381a399abe86d704afa13ed945270 304 Pfam PF06347 Bacterial SH3 domain 109 145 5.3E-7 T 22-04-2016 IPR010466 Protein of unknown function DUF1058 SRM_RS03585 f4d381a399abe86d704afa13ed945270 304 Pfam PF03734 L,D-transpeptidase catalytic domain 148 303 1.6E-11 T 22-04-2016 IPR005490 L,D-transpeptidase catalytic domain GO:0016740 UniPathway: UPA00219 SRM_RS03585 f4d381a399abe86d704afa13ed945270 304 PANTHER PTHR36699 258 304 2.0E-15 T 22-04-2016 SRM_RS03585 f4d381a399abe86d704afa13ed945270 304 PANTHER PTHR36699 145 234 2.0E-15 T 22-04-2016 SRM_RS03585 f4d381a399abe86d704afa13ed945270 304 Gene3D G3DSA:2.40.440.10 245 303 5.9E-15 T 22-04-2016 SRM_RS03585 f4d381a399abe86d704afa13ed945270 304 Gene3D G3DSA:2.40.440.10 145 206 5.9E-15 T 22-04-2016 SRM_RS03585 f4d381a399abe86d704afa13ed945270 304 SUPERFAMILY SSF141523 142 210 2.88E-16 T 22-04-2016 SRM_RS03585 f4d381a399abe86d704afa13ed945270 304 SUPERFAMILY SSF141523 248 303 2.88E-16 T 22-04-2016 SRM_RS06880 2d5f378bfac55ced00f37f80aaf5ed08 798 ProSitePatterns PS00742 PEP-utilizing enzymes signature 2. 699 717 - T 22-04-2016 IPR023151 PEP-utilising enzyme, conserved site GO:0016772 SRM_RS06880 2d5f378bfac55ced00f37f80aaf5ed08 798 Pfam PF00391 PEP-utilising enzyme, mobile domain 388 457 2.0E-23 T 22-04-2016 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 SRM_RS06880 2d5f378bfac55ced00f37f80aaf5ed08 798 Pfam PF02896 PEP-utilising enzyme, TIM barrel domain 486 794 1.8E-63 T 22-04-2016 IPR000121 PEP-utilising enzyme, C-terminal GO:0016310|GO:0016772 SRM_RS06880 2d5f378bfac55ced00f37f80aaf5ed08 798 PIRSF PIRSF000854 8 798 0.0 T 22-04-2016 IPR006319 Phosphoenolpyruvate synthase GO:0006090|GO:0008986 KEGG: 00620+2.7.9.2|KEGG: 00680+2.7.9.2|KEGG: 00720+2.7.9.2|MetaCyc: PWY-5484|UniPathway: UPA00138 SRM_RS06880 2d5f378bfac55ced00f37f80aaf5ed08 798 Gene3D G3DSA:3.20.20.60 485 794 1.6E-101 T 22-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 SRM_RS06880 2d5f378bfac55ced00f37f80aaf5ed08 798 PANTHER PTHR22931:SF7 1 798 0.0 T 22-04-2016 SRM_RS06880 2d5f378bfac55ced00f37f80aaf5ed08 798 Pfam PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain 26 346 1.7E-108 T 22-04-2016 IPR002192 Pyruvate phosphate dikinase, PEP/pyruvate-binding GO:0005524|GO:0016301|GO:0016310 SRM_RS06880 2d5f378bfac55ced00f37f80aaf5ed08 798 Gene3D G3DSA:3.50.30.10 378 476 2.7E-31 T 22-04-2016 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 SRM_RS06880 2d5f378bfac55ced00f37f80aaf5ed08 798 SUPERFAMILY SSF52009 355 471 1.96E-28 T 22-04-2016 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 SRM_RS06880 2d5f378bfac55ced00f37f80aaf5ed08 798 TIGRFAM TIGR01418 PEP_synth: phosphoenolpyruvate synthase 14 794 0.0 T 22-04-2016 IPR006319 Phosphoenolpyruvate synthase GO:0006090|GO:0008986 KEGG: 00620+2.7.9.2|KEGG: 00680+2.7.9.2|KEGG: 00720+2.7.9.2|MetaCyc: PWY-5484|UniPathway: UPA00138 SRM_RS06880 2d5f378bfac55ced00f37f80aaf5ed08 798 PANTHER PTHR22931 1 798 0.0 T 22-04-2016 SRM_RS06880 2d5f378bfac55ced00f37f80aaf5ed08 798 SUPERFAMILY SSF56059 11 383 8.0E-98 T 22-04-2016 SRM_RS06880 2d5f378bfac55ced00f37f80aaf5ed08 798 SUPERFAMILY SSF51621 465 796 3.14E-95 T 22-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 SRM_RS06880 2d5f378bfac55ced00f37f80aaf5ed08 798 Gene3D G3DSA:3.30.470.20 202 358 4.1E-48 T 22-04-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 SRM_RS06880 2d5f378bfac55ced00f37f80aaf5ed08 798 Gene3D G3DSA:3.30.1490.20 14 201 3.1E-63 T 22-04-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 SRM_RS06880 2d5f378bfac55ced00f37f80aaf5ed08 798 ProSitePatterns PS00370 PEP-utilizing enzymes phosphorylation site signature. 418 429 - T 22-04-2016 IPR018274 PEP-utilising enzyme, active site GO:0016310|GO:0016772 SRM_RS14740 d55683ab565206be4523c5dbce1d45d5 601 SUPERFAMILY SSF56235 39 601 2.7E-169 T 22-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal SRM_RS14740 d55683ab565206be4523c5dbce1d45d5 601 PANTHER PTHR11686:SF8 40 601 2.2E-256 T 22-04-2016 SRM_RS14740 d55683ab565206be4523c5dbce1d45d5 601 TIGRFAM TIGR00066 g_glut_trans: gamma-glutamyltransferase 48 586 2.1E-113 T 22-04-2016 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 SRM_RS14740 d55683ab565206be4523c5dbce1d45d5 601 PANTHER PTHR11686 40 601 2.2E-256 T 22-04-2016 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 SRM_RS14740 d55683ab565206be4523c5dbce1d45d5 601 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 161 180 7.9E-38 T 22-04-2016 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 SRM_RS14740 d55683ab565206be4523c5dbce1d45d5 601 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 70 95 7.9E-38 T 22-04-2016 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 SRM_RS14740 d55683ab565206be4523c5dbce1d45d5 601 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 271 287 7.9E-38 T 22-04-2016 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 SRM_RS14740 d55683ab565206be4523c5dbce1d45d5 601 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 411 429 7.9E-38 T 22-04-2016 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 SRM_RS14740 d55683ab565206be4523c5dbce1d45d5 601 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 466 481 7.9E-38 T 22-04-2016 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 SRM_RS14740 d55683ab565206be4523c5dbce1d45d5 601 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 300 319 7.9E-38 T 22-04-2016 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 SRM_RS14740 d55683ab565206be4523c5dbce1d45d5 601 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 143 161 7.9E-38 T 22-04-2016 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 SRM_RS14740 d55683ab565206be4523c5dbce1d45d5 601 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 490 507 7.9E-38 T 22-04-2016 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 SRM_RS14740 d55683ab565206be4523c5dbce1d45d5 601 Pfam PF01019 Gamma-glutamyltranspeptidase 63 596 7.6E-149 T 22-04-2016 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 SRM_RS12065 182bd85090d0498cc1dc4b22b37711d6 369 PIRSF PIRSF006004 13 369 5.0E-123 T 22-04-2016 IPR004383 Ribosomal RNA large subunit methyltransferase RlmN/Cfr GO:0005737|GO:0006364|GO:0008173 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 SRM_RS12065 182bd85090d0498cc1dc4b22b37711d6 369 SUPERFAMILY SSF102114 125 345 3.73E-14 T 22-04-2016 SRM_RS12065 182bd85090d0498cc1dc4b22b37711d6 369 PANTHER PTHR30544 16 369 5.3E-146 T 22-04-2016 IPR004383 Ribosomal RNA large subunit methyltransferase RlmN/Cfr GO:0005737|GO:0006364|GO:0008173 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 SRM_RS12065 182bd85090d0498cc1dc4b22b37711d6 369 Hamap MF_01849 Dual-specificity RNA methyltransferase RlmN [rlmN]. 17 368 69.568 T 22-04-2016 IPR027492 Dual-specificity RNA methyltransferase RlmN GO:0030488|GO:0070475 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 SRM_RS12065 182bd85090d0498cc1dc4b22b37711d6 369 Gene3D G3DSA:3.20.20.70 124 349 1.5E-14 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 SRM_RS12065 182bd85090d0498cc1dc4b22b37711d6 369 Pfam PF04055 Radical SAM superfamily 130 295 1.1E-13 T 22-04-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 SRM_RS12065 182bd85090d0498cc1dc4b22b37711d6 369 TIGRFAM TIGR00048 rRNA_mod_RlmN: 23S rRNA (adenine(2503)-C(2))-methyltransferase 16 365 3.3E-115 T 22-04-2016 IPR004383 Ribosomal RNA large subunit methyltransferase RlmN/Cfr GO:0005737|GO:0006364|GO:0008173 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 SRM_RS05135 23fd2aa11876e8a5088c069fd876cbfc 145 ProSitePatterns PS00893 Nudix box signature. 34 55 - T 22-04-2016 IPR020084 NUDIX hydrolase, conserved site GO:0016787 SRM_RS05135 23fd2aa11876e8a5088c069fd876cbfc 145 Pfam PF00293 NUDIX domain 10 117 1.9E-16 T 22-04-2016 IPR000086 NUDIX hydrolase domain GO:0016787 SRM_RS05135 23fd2aa11876e8a5088c069fd876cbfc 145 PANTHER PTHR22769 1 122 5.5E-14 T 22-04-2016 SRM_RS05135 23fd2aa11876e8a5088c069fd876cbfc 145 PANTHER PTHR22769:SF35 1 122 5.5E-14 T 22-04-2016 SRM_RS05135 23fd2aa11876e8a5088c069fd876cbfc 145 SUPERFAMILY SSF55811 2 129 2.44E-23 T 22-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 SRM_RS05135 23fd2aa11876e8a5088c069fd876cbfc 145 Gene3D G3DSA:3.90.79.10 2 130 2.2E-27 T 22-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 SRM_RS11130 fed7161645f2c0a8851aa585c4acef62 339 Gene3D G3DSA:3.20.20.20 73 334 5.8E-102 T 22-04-2016 IPR000489 Pterin-binding domain GO:0042558 SRM_RS11130 fed7161645f2c0a8851aa585c4acef62 339 PANTHER PTHR20941 74 339 1.3E-108 T 22-04-2016 SRM_RS11130 fed7161645f2c0a8851aa585c4acef62 339 Pfam PF00809 Pterin binding enzyme 76 320 4.8E-82 T 22-04-2016 IPR000489 Pterin-binding domain GO:0042558 SRM_RS11130 fed7161645f2c0a8851aa585c4acef62 339 SUPERFAMILY SSF51717 72 337 9.55E-91 T 22-04-2016 IPR011005 Dihydropteroate synthase-like GO:0044237 SRM_RS11130 fed7161645f2c0a8851aa585c4acef62 339 PANTHER PTHR20941:SF1 74 339 1.3E-108 T 22-04-2016 SRM_RS11130 fed7161645f2c0a8851aa585c4acef62 339 ProSitePatterns PS00793 Dihydropteroate synthase signature 2. 109 122 - T 22-04-2016 IPR000489 Pterin-binding domain GO:0042558 SRM_RS11130 fed7161645f2c0a8851aa585c4acef62 339 TIGRFAM TIGR01496 DHPS: dihydropteroate synthase 75 332 2.9E-93 T 22-04-2016 IPR006390 Dihydropteroate synthase GO:0004156|GO:0009396 KEGG: 00790+2.5.1.15|MetaCyc: PWY-6614|UniPathway: UPA00077 SRM_RS11130 fed7161645f2c0a8851aa585c4acef62 339 ProSitePatterns PS00792 Dihydropteroate synthase signature 1. 75 90 - T 22-04-2016 IPR000489 Pterin-binding domain GO:0042558 SRM_RS11280 bc5da3fee990de78de608fef594cbfe3 212 PANTHER PTHR30055 18 208 5.3E-26 T 22-04-2016 SRM_RS11280 bc5da3fee990de78de608fef594cbfe3 212 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 51 74 8.3E-10 T 22-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 SRM_RS11280 bc5da3fee990de78de608fef594cbfe3 212 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 30 43 8.3E-10 T 22-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 SRM_RS11280 bc5da3fee990de78de608fef594cbfe3 212 Pfam PF00440 Bacterial regulatory proteins, tetR family 30 73 1.0E-17 T 22-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 SRM_RS11280 bc5da3fee990de78de608fef594cbfe3 212 Gene3D G3DSA:1.10.357.10 77 205 1.1E-15 T 22-04-2016 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 SRM_RS11280 bc5da3fee990de78de608fef594cbfe3 212 SUPERFAMILY SSF46689 23 102 1.59E-19 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 SRM_RS11280 bc5da3fee990de78de608fef594cbfe3 212 SUPERFAMILY SSF48498 97 203 2.05E-7 T 22-04-2016 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal SRM_RS11280 bc5da3fee990de78de608fef594cbfe3 212 Gene3D G3DSA:1.10.10.60 26 76 3.5E-21 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 SRM_RS11280 bc5da3fee990de78de608fef594cbfe3 212 ProSitePatterns PS01081 TetR-type HTH domain signature. 42 72 - T 22-04-2016 IPR023772 DNA-binding HTH domain, TetR-type, conserved site SRM_RS01500 efe69226e15fa324ade6bf0aaf76b008 221 PANTHER PTHR30363:SF17 17 203 6.0E-13 T 22-04-2016 SRM_RS01500 efe69226e15fa324ade6bf0aaf76b008 221 SUPERFAMILY SSF46785 13 203 4.55E-25 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SRM_RS01500 efe69226e15fa324ade6bf0aaf76b008 221 Pfam PF01022 Bacterial regulatory protein, arsR family 23 66 2.2E-9 T 22-04-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 SRM_RS01500 efe69226e15fa324ade6bf0aaf76b008 221 PANTHER PTHR30363 17 203 6.0E-13 T 22-04-2016 SRM_RS01500 efe69226e15fa324ade6bf0aaf76b008 221 SMART SM00418 14 89 2.0E-5 T 22-04-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 SRM_RS01500 efe69226e15fa324ade6bf0aaf76b008 221 Gene3D G3DSA:1.10.10.10 11 87 6.1E-16 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SRM_RS06365 d4d3a7e987b435e413f3c646af0b34a7 569 Pfam PF01406 tRNA synthetases class I (C) catalytic domain 72 402 2.8E-88 T 22-04-2016 IPR032678 tRNA synthetases class I, catalytic domain KEGG: 00970+6.1.1.16 SRM_RS06365 d4d3a7e987b435e413f3c646af0b34a7 569 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 265 283 5.2E-22 T 22-04-2016 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 SRM_RS06365 d4d3a7e987b435e413f3c646af0b34a7 569 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 118 127 5.2E-22 T 22-04-2016 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 SRM_RS06365 d4d3a7e987b435e413f3c646af0b34a7 569 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 82 93 5.2E-22 T 22-04-2016 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 SRM_RS06365 d4d3a7e987b435e413f3c646af0b34a7 569 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 296 317 5.2E-22 T 22-04-2016 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 SRM_RS06365 d4d3a7e987b435e413f3c646af0b34a7 569 TIGRFAM TIGR00435 cysS: cysteine--tRNA ligase 60 564 3.7E-123 T 22-04-2016 IPR015803 Cysteine-tRNA ligase GO:0004817|GO:0005524|GO:0006423 KEGG: 00970+6.1.1.16|Reactome: REACT_71 SRM_RS06365 d4d3a7e987b435e413f3c646af0b34a7 569 SUPERFAMILY SSF52374 60 402 2.31E-71 T 22-04-2016 SRM_RS06365 d4d3a7e987b435e413f3c646af0b34a7 569 Pfam PF09190 DALR domain 443 498 4.3E-6 T 22-04-2016 IPR015273 Cysteinyl-tRNA synthetase, class Ia, DALR GO:0000166|GO:0004817|GO:0005524|GO:0005737|GO:0006423 KEGG: 00970+6.1.1.16 SRM_RS06365 d4d3a7e987b435e413f3c646af0b34a7 569 SUPERFAMILY SSF47323 428 564 1.96E-25 T 22-04-2016 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 SRM_RS06365 d4d3a7e987b435e413f3c646af0b34a7 569 PANTHER PTHR10890 33 355 2.6E-142 T 22-04-2016 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 SRM_RS06365 d4d3a7e987b435e413f3c646af0b34a7 569 PANTHER PTHR10890 372 566 2.6E-142 T 22-04-2016 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 SRM_RS06365 d4d3a7e987b435e413f3c646af0b34a7 569 SMART SM00840 440 499 0.0095 T 22-04-2016 IPR015273 Cysteinyl-tRNA synthetase, class Ia, DALR GO:0000166|GO:0004817|GO:0005524|GO:0005737|GO:0006423 KEGG: 00970+6.1.1.16 SRM_RS06365 d4d3a7e987b435e413f3c646af0b34a7 569 Hamap MF_00041 Cysteine--tRNA ligase [cysS]. 59 565 33.331 T 22-04-2016 IPR015803 Cysteine-tRNA ligase GO:0004817|GO:0005524|GO:0006423 KEGG: 00970+6.1.1.16|Reactome: REACT_71 SRM_RS06365 d4d3a7e987b435e413f3c646af0b34a7 569 Gene3D G3DSA:1.20.120.640 397 491 1.6E-8 T 22-04-2016 SRM_RS06365 d4d3a7e987b435e413f3c646af0b34a7 569 Gene3D G3DSA:3.40.50.620 76 395 2.6E-81 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold SRM_RS10520 2efd5dd679b698d9ab7704bcf4d84a12 501 Pfam PF01336 OB-fold nucleic acid binding domain 18 95 6.7E-14 T 22-04-2016 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type GO:0003676 SRM_RS10520 2efd5dd679b698d9ab7704bcf4d84a12 501 SUPERFAMILY SSF55681 366 495 3.94E-89 T 22-04-2016 SRM_RS10520 2efd5dd679b698d9ab7704bcf4d84a12 501 SUPERFAMILY SSF55681 112 310 3.94E-89 T 22-04-2016 SRM_RS10520 2efd5dd679b698d9ab7704bcf4d84a12 501 Pfam PF00152 tRNA synthetases class II (D, K and N) 114 495 4.6E-80 T 22-04-2016 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 SRM_RS10520 2efd5dd679b698d9ab7704bcf4d84a12 501 PANTHER PTHR22594:SF16 360 501 8.4E-176 T 22-04-2016 IPR004522 Asparagine-tRNA ligase GO:0000166|GO:0004816|GO:0005524|GO:0005737|GO:0006421 KEGG: 00970+6.1.1.22|Reactome: REACT_71 SRM_RS10520 2efd5dd679b698d9ab7704bcf4d84a12 501 PANTHER PTHR22594:SF16 6 297 8.4E-176 T 22-04-2016 IPR004522 Asparagine-tRNA ligase GO:0000166|GO:0004816|GO:0005524|GO:0005737|GO:0006421 KEGG: 00970+6.1.1.22|Reactome: REACT_71 SRM_RS10520 2efd5dd679b698d9ab7704bcf4d84a12 501 PANTHER PTHR22594 360 501 8.4E-176 T 22-04-2016 IPR018150 Aminoacyl-tRNA synthetase, class II (D/K/N)-like GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 SRM_RS10520 2efd5dd679b698d9ab7704bcf4d84a12 501 PANTHER PTHR22594 6 297 8.4E-176 T 22-04-2016 IPR018150 Aminoacyl-tRNA synthetase, class II (D/K/N)-like GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 SRM_RS10520 2efd5dd679b698d9ab7704bcf4d84a12 501 Gene3D G3DSA:3.30.930.10 365 501 4.3E-112 T 22-04-2016 SRM_RS10520 2efd5dd679b698d9ab7704bcf4d84a12 501 Gene3D G3DSA:3.30.930.10 104 295 4.3E-112 T 22-04-2016 SRM_RS10520 2efd5dd679b698d9ab7704bcf4d84a12 501 PRINTS PR01042 Aspartyl-tRNA synthetase signature 456 470 1.4E-13 T 22-04-2016 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 SRM_RS10520 2efd5dd679b698d9ab7704bcf4d84a12 501 PRINTS PR01042 Aspartyl-tRNA synthetase signature 183 195 1.4E-13 T 22-04-2016 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 SRM_RS10520 2efd5dd679b698d9ab7704bcf4d84a12 501 PRINTS PR01042 Aspartyl-tRNA synthetase signature 416 432 1.4E-13 T 22-04-2016 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 SRM_RS10520 2efd5dd679b698d9ab7704bcf4d84a12 501 PRINTS PR01042 Aspartyl-tRNA synthetase signature 199 212 1.4E-13 T 22-04-2016 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 SRM_RS10520 2efd5dd679b698d9ab7704bcf4d84a12 501 Hamap MF_00534 Asparagine--tRNA ligase [asnS]. 3 501 40.125 T 22-04-2016 IPR004522 Asparagine-tRNA ligase GO:0000166|GO:0004816|GO:0005524|GO:0005737|GO:0006421 KEGG: 00970+6.1.1.22|Reactome: REACT_71 SRM_RS10520 2efd5dd679b698d9ab7704bcf4d84a12 501 SUPERFAMILY SSF50249 7 104 6.43E-23 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold SRM_RS10520 2efd5dd679b698d9ab7704bcf4d84a12 501 Gene3D G3DSA:2.40.50.140 7 103 1.4E-26 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold SRM_RS15060 c46de592284292feaf82f1b2b2b26783 250 SMART SM00448 10 118 2.8E-25 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SRM_RS15060 c46de592284292feaf82f1b2b2b26783 250 Gene3D G3DSA:2.40.50.40 143 211 4.4E-17 T 22-04-2016 SRM_RS15060 c46de592284292feaf82f1b2b2b26783 250 SMART SM00850 151 250 1.0E-27 T 22-04-2016 IPR007492 LytTR DNA-binding domain GO:0003677 SRM_RS15060 c46de592284292feaf82f1b2b2b26783 250 Gene3D G3DSA:3.40.50.2300 6 127 1.2E-29 T 22-04-2016 SRM_RS15060 c46de592284292feaf82f1b2b2b26783 250 PANTHER PTHR26402 10 132 2.0E-26 T 22-04-2016 SRM_RS15060 c46de592284292feaf82f1b2b2b26783 250 Pfam PF00072 Response regulator receiver domain 12 118 5.6E-24 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SRM_RS15060 c46de592284292feaf82f1b2b2b26783 250 PANTHER PTHR26402:SF501 10 132 2.0E-26 T 22-04-2016 SRM_RS15060 c46de592284292feaf82f1b2b2b26783 250 SUPERFAMILY SSF52172 8 129 4.7E-31 T 22-04-2016 IPR011006 CheY-like superfamily SRM_RS15060 c46de592284292feaf82f1b2b2b26783 250 Pfam PF04397 LytTr DNA-binding domain 155 249 6.9E-20 T 22-04-2016 IPR007492 LytTR DNA-binding domain GO:0003677 SRM_RS09235 ddcac7827e54b618afc982a51a7cf5c1 873 SUPERFAMILY SSF81653 350 446 1.31E-30 T 22-04-2016 SRM_RS09235 ddcac7827e54b618afc982a51a7cf5c1 873 Gene3D G3DSA:3.40.1110.10 563 675 2.6E-28 T 22-04-2016 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 SRM_RS09235 ddcac7827e54b618afc982a51a7cf5c1 873 Gene3D G3DSA:3.30.70.100 46 116 1.5E-18 T 22-04-2016 SRM_RS09235 ddcac7827e54b618afc982a51a7cf5c1 873 Pfam PF00122 E1-E2 ATPase 318 538 3.5E-72 T 22-04-2016 IPR008250 P-type ATPase, A domain GO:0000166|GO:0046872 SRM_RS09235 ddcac7827e54b618afc982a51a7cf5c1 873 SUPERFAMILY SSF55008 47 115 5.89E-16 T 22-04-2016 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 SRM_RS09235 ddcac7827e54b618afc982a51a7cf5c1 873 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 548 562 1.19E-28 T 22-04-2016 SRM_RS09235 ddcac7827e54b618afc982a51a7cf5c1 873 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 396 410 1.19E-28 T 22-04-2016 SRM_RS09235 ddcac7827e54b618afc982a51a7cf5c1 873 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 748 767 1.19E-28 T 22-04-2016 SRM_RS09235 ddcac7827e54b618afc982a51a7cf5c1 873 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 771 783 1.19E-28 T 22-04-2016 SRM_RS09235 ddcac7827e54b618afc982a51a7cf5c1 873 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 673 684 1.19E-28 T 22-04-2016 SRM_RS09235 ddcac7827e54b618afc982a51a7cf5c1 873 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 695 705 1.19E-28 T 22-04-2016 SRM_RS09235 ddcac7827e54b618afc982a51a7cf5c1 873 PANTHER PTHR24093:SF50 44 859 1.2E-285 T 22-04-2016 SRM_RS09235 ddcac7827e54b618afc982a51a7cf5c1 873 Pfam PF00702 haloacid dehalogenase-like hydrolase 545 762 1.8E-42 T 22-04-2016 SRM_RS09235 ddcac7827e54b618afc982a51a7cf5c1 873 PRINTS PR00942 Copper-transporting ATPase 1 signature 262 287 4.34E-11 T 22-04-2016 SRM_RS09235 ddcac7827e54b618afc982a51a7cf5c1 873 PRINTS PR00942 Copper-transporting ATPase 1 signature 209 230 4.34E-11 T 22-04-2016 SRM_RS09235 ddcac7827e54b618afc982a51a7cf5c1 873 PRINTS PR00942 Copper-transporting ATPase 1 signature 48 73 4.34E-11 T 22-04-2016 SRM_RS09235 ddcac7827e54b618afc982a51a7cf5c1 873 PRINTS PR00942 Copper-transporting ATPase 1 signature 140 161 4.34E-11 T 22-04-2016 SRM_RS09235 ddcac7827e54b618afc982a51a7cf5c1 873 PRINTS PR00943 Copper-transporting ATPase signature 469 483 3.31E-8 T 22-04-2016 SRM_RS09235 ddcac7827e54b618afc982a51a7cf5c1 873 PRINTS PR00943 Copper-transporting ATPase signature 264 283 3.31E-8 T 22-04-2016 SRM_RS09235 ddcac7827e54b618afc982a51a7cf5c1 873 PRINTS PR00943 Copper-transporting ATPase signature 336 354 3.31E-8 T 22-04-2016 SRM_RS09235 ddcac7827e54b618afc982a51a7cf5c1 873 PRINTS PR00943 Copper-transporting ATPase signature 316 335 3.31E-8 T 22-04-2016 SRM_RS09235 ddcac7827e54b618afc982a51a7cf5c1 873 PRINTS PR00943 Copper-transporting ATPase signature 821 835 3.31E-8 T 22-04-2016 SRM_RS09235 ddcac7827e54b618afc982a51a7cf5c1 873 ProSitePatterns PS00154 E1-E2 ATPases phosphorylation site. 550 556 - T 22-04-2016 IPR018303 P-type ATPase, phosphorylation site SRM_RS09235 ddcac7827e54b618afc982a51a7cf5c1 873 Gene3D G3DSA:2.70.150.10 278 447 2.0E-37 T 22-04-2016 IPR008250 P-type ATPase, A domain GO:0000166|GO:0046872 SRM_RS09235 ddcac7827e54b618afc982a51a7cf5c1 873 TIGRFAM TIGR00003 TIGR00003: copper ion binding protein 119 180 1.2E-12 T 22-04-2016 IPR006122 Heavy metal-associated domain, copper ion-binding GO:0005507 SRM_RS09235 ddcac7827e54b618afc982a51a7cf5c1 873 TIGRFAM TIGR00003 TIGR00003: copper ion binding protein 49 113 6.6E-9 T 22-04-2016 IPR006122 Heavy metal-associated domain, copper ion-binding GO:0005507 SRM_RS09235 ddcac7827e54b618afc982a51a7cf5c1 873 SUPERFAMILY SSF56784 605 855 6.98E-60 T 22-04-2016 IPR023214 HAD-like domain SRM_RS09235 ddcac7827e54b618afc982a51a7cf5c1 873 SUPERFAMILY SSF56784 546 566 6.98E-60 T 22-04-2016 IPR023214 HAD-like domain SRM_RS09235 ddcac7827e54b618afc982a51a7cf5c1 873 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 319 827 1.1E-95 T 22-04-2016 IPR001757 P-type ATPase GO:0016021 SRM_RS09235 ddcac7827e54b618afc982a51a7cf5c1 873 Pfam PF00403 Heavy-metal-associated domain 50 112 2.6E-10 T 22-04-2016 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 SRM_RS09235 ddcac7827e54b618afc982a51a7cf5c1 873 Pfam PF00403 Heavy-metal-associated domain 120 180 3.4E-15 T 22-04-2016 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 SRM_RS09235 ddcac7827e54b618afc982a51a7cf5c1 873 TIGRFAM TIGR01525 ATPase-IB_hvy: heavy metal translocating P-type ATPase 279 857 5.5E-193 T 22-04-2016 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 SRM_RS09235 ddcac7827e54b618afc982a51a7cf5c1 873 ProSitePatterns PS01047 Heavy-metal-associated domain. 122 151 - T 22-04-2016 IPR017969 Heavy-metal-associated, conserved site GO:0030001|GO:0046872 SRM_RS09235 ddcac7827e54b618afc982a51a7cf5c1 873 ProSitePatterns PS01047 Heavy-metal-associated domain. 53 82 - T 22-04-2016 IPR017969 Heavy-metal-associated, conserved site GO:0030001|GO:0046872 SRM_RS09235 ddcac7827e54b618afc982a51a7cf5c1 873 TIGRFAM TIGR01511 ATPase-IB1_Cu: copper-translocating P-type ATPase 261 858 3.2E-183 T 22-04-2016 SRM_RS09235 ddcac7827e54b618afc982a51a7cf5c1 873 Gene3D G3DSA:3.40.50.1000 676 817 2.8E-56 T 22-04-2016 IPR023214 HAD-like domain SRM_RS09235 ddcac7827e54b618afc982a51a7cf5c1 873 Gene3D G3DSA:3.40.50.1000 519 562 2.8E-56 T 22-04-2016 IPR023214 HAD-like domain SRM_RS09235 ddcac7827e54b618afc982a51a7cf5c1 873 Gene3D G3DSA:3.30.70.100 117 180 5.7E-23 T 22-04-2016 SRM_RS09235 ddcac7827e54b618afc982a51a7cf5c1 873 PANTHER PTHR24093 44 859 1.2E-285 T 22-04-2016 SRM_RS09235 ddcac7827e54b618afc982a51a7cf5c1 873 SUPERFAMILY SSF81665 447 542 3.4E-16 T 22-04-2016 SRM_RS09235 ddcac7827e54b618afc982a51a7cf5c1 873 SUPERFAMILY SSF81665 296 350 3.4E-16 T 22-04-2016 SRM_RS09235 ddcac7827e54b618afc982a51a7cf5c1 873 SUPERFAMILY SSF81665 797 848 3.4E-16 T 22-04-2016 SRM_RS09235 ddcac7827e54b618afc982a51a7cf5c1 873 SUPERFAMILY SSF55008 116 180 4.58E-20 T 22-04-2016 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 SRM_RS10580 4dcfa36c3ca9c2f45875830ea4f9e450 221 Gene3D G3DSA:3.30.910.20 54 114 3.4E-10 T 22-04-2016 SRM_RS10580 4dcfa36c3ca9c2f45875830ea4f9e450 221 Pfam PF03938 Outer membrane protein (OmpH-like) 50 210 6.3E-32 T 22-04-2016 IPR005632 Chaperone protein Skp GO:0051082 SRM_RS10580 4dcfa36c3ca9c2f45875830ea4f9e450 221 SUPERFAMILY SSF111384 62 210 9.29E-24 T 22-04-2016 IPR024930 Skp domain SRM_RS10580 4dcfa36c3ca9c2f45875830ea4f9e450 221 Gene3D G3DSA:3.30.910.20 155 210 2.3E-16 T 22-04-2016 SRM_RS10580 4dcfa36c3ca9c2f45875830ea4f9e450 221 PANTHER PTHR35089 44 217 5.4E-29 T 22-04-2016 SRM_RS10580 4dcfa36c3ca9c2f45875830ea4f9e450 221 SMART SM00935 50 211 1.8E-42 T 22-04-2016 IPR005632 Chaperone protein Skp GO:0051082 SRM_RS07095 ff71fff500596670419f6bdd9b5f02f3 260 PANTHER PTHR33991 5 260 6.2E-40 T 22-04-2016 SRM_RS07095 ff71fff500596670419f6bdd9b5f02f3 260 Pfam PF02565 Recombination protein O C terminal 89 237 6.5E-18 T 22-04-2016 IPR003717 Recombination protein O, RecO GO:0006281|GO:0006310 SRM_RS07095 ff71fff500596670419f6bdd9b5f02f3 260 SUPERFAMILY SSF50249 6 84 4.63E-19 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold SRM_RS07095 ff71fff500596670419f6bdd9b5f02f3 260 Hamap MF_00201 DNA repair protein RecO [recO]. 5 250 25.309 T 22-04-2016 IPR003717 Recombination protein O, RecO GO:0006281|GO:0006310 SRM_RS07095 ff71fff500596670419f6bdd9b5f02f3 260 Gene3D G3DSA:2.40.50.140 4 88 2.0E-23 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold SRM_RS07095 ff71fff500596670419f6bdd9b5f02f3 260 Pfam PF11967 Recombination protein O N terminal 6 84 5.2E-25 T 22-04-2016 IPR022572 DNA replication/recombination mediator RecO, N-terminal SRM_RS07095 ff71fff500596670419f6bdd9b5f02f3 260 TIGRFAM TIGR00613 reco: DNA repair protein RecO 8 234 9.0E-37 T 22-04-2016 IPR003717 Recombination protein O, RecO GO:0006281|GO:0006310 SRM_RS07095 ff71fff500596670419f6bdd9b5f02f3 260 SUPERFAMILY SSF57863 87 236 2.3E-15 T 22-04-2016 SRM_RS08290 6da05b1f43dfb382e15877204573a364 457 Pfam PF13437 HlyD family secretion protein 299 388 2.3E-10 T 22-04-2016 SRM_RS08290 6da05b1f43dfb382e15877204573a364 457 Gene3D G3DSA:2.40.50.100 115 151 2.6E-13 T 22-04-2016 SRM_RS08290 6da05b1f43dfb382e15877204573a364 457 Gene3D G3DSA:2.40.50.100 291 328 2.6E-13 T 22-04-2016 SRM_RS08290 6da05b1f43dfb382e15877204573a364 457 SUPERFAMILY SSF51230 114 152 7.42E-5 T 22-04-2016 IPR011053 Single hybrid motif SRM_RS08290 6da05b1f43dfb382e15877204573a364 457 Pfam PF13533 Biotin-lipoyl like 122 153 7.7E-6 T 22-04-2016 SRM_RS08290 6da05b1f43dfb382e15877204573a364 457 PANTHER PTHR30386 73 453 8.6E-43 T 22-04-2016 SRM_RS08290 6da05b1f43dfb382e15877204573a364 457 PANTHER PTHR30386:SF8 73 453 8.6E-43 T 22-04-2016 SRM_RS15080 fba298a734848de4347588c3c844c591 382 Gene3D G3DSA:3.40.630.10 105 285 2.2E-44 T 22-04-2016 SRM_RS15080 fba298a734848de4347588c3c844c591 382 SMART SM00228 296 373 3.2E-5 T 22-04-2016 IPR001478 PDZ domain GO:0005515 SRM_RS15080 fba298a734848de4347588c3c844c591 382 Gene3D G3DSA:2.30.42.10 312 381 2.8E-14 T 22-04-2016 IPR001478 PDZ domain GO:0005515 SRM_RS15080 fba298a734848de4347588c3c844c591 382 SUPERFAMILY SSF53187 105 278 3.14E-42 T 22-04-2016 SRM_RS15080 fba298a734848de4347588c3c844c591 382 Pfam PF13180 PDZ domain 311 381 1.2E-10 T 22-04-2016 IPR001478 PDZ domain GO:0005515 SRM_RS15080 fba298a734848de4347588c3c844c591 382 Pfam PF04389 Peptidase family M28 106 270 3.3E-41 T 22-04-2016 IPR007484 Peptidase M28 SRM_RS15080 fba298a734848de4347588c3c844c591 382 PANTHER PTHR12147 112 284 6.2E-32 T 22-04-2016 SRM_RS15080 fba298a734848de4347588c3c844c591 382 SUPERFAMILY SSF50156 309 381 3.02E-13 T 22-04-2016 IPR001478 PDZ domain GO:0005515 SRM_RS03295 0cabcbad36a517a26b2e9e44167c63e5 312 Pfam PF00440 Bacterial regulatory proteins, tetR family 105 151 4.5E-11 T 22-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 SRM_RS03295 0cabcbad36a517a26b2e9e44167c63e5 312 SUPERFAMILY SSF48498 176 299 2.38E-21 T 22-04-2016 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal SRM_RS03295 0cabcbad36a517a26b2e9e44167c63e5 312 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 126 149 4.7E-5 T 22-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 SRM_RS03295 0cabcbad36a517a26b2e9e44167c63e5 312 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 105 118 4.7E-5 T 22-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 SRM_RS03295 0cabcbad36a517a26b2e9e44167c63e5 312 SUPERFAMILY SSF46689 93 174 3.69E-17 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 SRM_RS03295 0cabcbad36a517a26b2e9e44167c63e5 312 PANTHER PTHR30328:SF11 97 255 1.2E-21 T 22-04-2016 SRM_RS03295 0cabcbad36a517a26b2e9e44167c63e5 312 Gene3D G3DSA:1.10.357.10 93 297 4.8E-43 T 22-04-2016 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 SRM_RS03295 0cabcbad36a517a26b2e9e44167c63e5 312 Pfam PF08362 YcdC-like protein, C-terminal region 167 298 1.1E-4 T 22-04-2016 IPR013573 Transcription regulator YcdC, C-terminal GO:0045892 SRM_RS03295 0cabcbad36a517a26b2e9e44167c63e5 312 PANTHER PTHR30328 97 255 1.2E-21 T 22-04-2016 SRM_RS10260 4cedaa7009b99b2b58e2f1a3b4df816d 495 Gene3D G3DSA:3.40.605.10 3 262 1.7E-98 T 22-04-2016 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 SRM_RS10260 4cedaa7009b99b2b58e2f1a3b4df816d 495 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 248 255 - T 22-04-2016 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0008152|GO:0016491|GO:0055114 SRM_RS10260 4cedaa7009b99b2b58e2f1a3b4df816d 495 PANTHER PTHR11699 1 495 2.2E-241 T 22-04-2016 SRM_RS10260 4cedaa7009b99b2b58e2f1a3b4df816d 495 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 276 287 - T 22-04-2016 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0008152|GO:0016491|GO:0055114 SRM_RS10260 4cedaa7009b99b2b58e2f1a3b4df816d 495 SUPERFAMILY SSF53720 4 480 4.58E-168 T 22-04-2016 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 SRM_RS10260 4cedaa7009b99b2b58e2f1a3b4df816d 495 Gene3D G3DSA:3.40.309.10 263 451 3.3E-71 T 22-04-2016 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0008152|GO:0016491|GO:0016620|GO:0055114 SRM_RS10260 4cedaa7009b99b2b58e2f1a3b4df816d 495 Pfam PF00171 Aldehyde dehydrogenase family 13 476 3.1E-168 T 22-04-2016 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 SRM_RS10260 4cedaa7009b99b2b58e2f1a3b4df816d 495 PANTHER PTHR11699:SF200 1 495 2.2E-241 T 22-04-2016 SRM_RS09430 22a9517c52a71833820de2f1458f674f 205 PANTHER PTHR12919 2 163 4.1E-35 T 22-04-2016 IPR000307 Ribosomal protein S16 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SRM_RS09430 22a9517c52a71833820de2f1458f674f 205 Hamap MF_00385 30S ribosomal protein S16 [rpsP]. 2 77 23.133 T 22-04-2016 IPR000307 Ribosomal protein S16 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SRM_RS09430 22a9517c52a71833820de2f1458f674f 205 SUPERFAMILY SSF54565 3 90 6.93E-30 T 22-04-2016 IPR023803 Ribosomal protein S16 domain SRM_RS09430 22a9517c52a71833820de2f1458f674f 205 TIGRFAM TIGR00002 S16: ribosomal protein bS16 3 79 1.4E-29 T 22-04-2016 IPR000307 Ribosomal protein S16 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SRM_RS09430 22a9517c52a71833820de2f1458f674f 205 Gene3D G3DSA:3.30.1320.10 3 85 6.7E-30 T 22-04-2016 IPR023803 Ribosomal protein S16 domain SRM_RS09430 22a9517c52a71833820de2f1458f674f 205 Pfam PF00886 Ribosomal protein S16 9 67 2.2E-21 T 22-04-2016 IPR000307 Ribosomal protein S16 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SRM_RS02195 16d797fecd4707e8a0aea1b70c74a845 456 SUPERFAMILY SSF48452 21 436 1.52E-32 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 SRM_RS02195 16d797fecd4707e8a0aea1b70c74a845 456 Gene3D G3DSA:1.25.40.10 238 413 8.8E-9 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 SRM_RS02195 16d797fecd4707e8a0aea1b70c74a845 456 Pfam PF07980 SusD family 347 443 6.4E-12 T 22-04-2016 IPR012944 RagB/SusD domain SRM_RS02885 02de251ea06cac9c9168feb437fba489 213 Hamap MF_01356 NAD(P)H-quinone oxidoreductase subunit K, chloroplastic [ndhK]. 2 152 39.092 T 22-04-2016 IPR006138 NADH-ubiquinone oxidoreductase, 20 Kd subunit GO:0008137|GO:0048038|GO:0051539|GO:0055114 SRM_RS02885 02de251ea06cac9c9168feb437fba489 213 TIGRFAM TIGR01957 nuoB_fam: NADH-quinone oxidoreductase, B subunit 12 154 9.8E-63 T 22-04-2016 IPR006138 NADH-ubiquinone oxidoreductase, 20 Kd subunit GO:0008137|GO:0048038|GO:0051539|GO:0055114 SRM_RS02885 02de251ea06cac9c9168feb437fba489 213 Gene3D G3DSA:3.40.50.700 22 153 5.5E-28 T 22-04-2016 IPR006137 NADH:ubiquinone oxidoreductase-like, 20kDa subunit GO:0051536|GO:0055114 SRM_RS02885 02de251ea06cac9c9168feb437fba489 213 SUPERFAMILY SSF56770 10 155 9.55E-62 T 22-04-2016 SRM_RS02885 02de251ea06cac9c9168feb437fba489 213 PANTHER PTHR11995 10 154 4.8E-75 T 22-04-2016 SRM_RS02885 02de251ea06cac9c9168feb437fba489 213 PANTHER PTHR11995:SF14 10 154 4.8E-75 T 22-04-2016 SRM_RS02885 02de251ea06cac9c9168feb437fba489 213 Pfam PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit 60 146 4.3E-21 T 22-04-2016 IPR006137 NADH:ubiquinone oxidoreductase-like, 20kDa subunit GO:0051536|GO:0055114 SRM_RS03425 ab55b08c03da0804a24cfd5e61095e64 134 SUPERFAMILY SSF52788 6 132 9.16E-28 T 22-04-2016 IPR023485 Phosphotyrosine protein phosphatase I superfamily SRM_RS03425 ab55b08c03da0804a24cfd5e61095e64 134 PANTHER PTHR11717 6 131 2.0E-14 T 22-04-2016 SRM_RS03425 ab55b08c03da0804a24cfd5e61095e64 134 PRINTS PR00719 LMW phosphotyrosine protein phosphatase signature 5 22 1.5E-7 T 22-04-2016 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 SRM_RS03425 ab55b08c03da0804a24cfd5e61095e64 134 PRINTS PR00719 LMW phosphotyrosine protein phosphatase signature 105 120 1.5E-7 T 22-04-2016 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 SRM_RS03425 ab55b08c03da0804a24cfd5e61095e64 134 PANTHER PTHR11717:SF14 6 131 2.0E-14 T 22-04-2016 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 SRM_RS03425 ab55b08c03da0804a24cfd5e61095e64 134 SMART SM00226 6 133 2.5E-16 T 22-04-2016 IPR023485 Phosphotyrosine protein phosphatase I superfamily SRM_RS03425 ab55b08c03da0804a24cfd5e61095e64 134 Pfam PF01451 Low molecular weight phosphotyrosine protein phosphatase 6 131 2.6E-20 T 22-04-2016 IPR023485 Phosphotyrosine protein phosphatase I superfamily SRM_RS03425 ab55b08c03da0804a24cfd5e61095e64 134 Gene3D G3DSA:3.40.50.270 6 132 6.2E-27 T 22-04-2016 SRM_RS07925 e12acc0ff33d2dc2d36907d2656fa544 322 SUPERFAMILY SSF53671 16 317 1.96E-88 T 22-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 SRM_RS07925 e12acc0ff33d2dc2d36907d2656fa544 322 Pfam PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain 19 161 2.0E-36 T 22-04-2016 IPR006132 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding GO:0006520|GO:0016743 SRM_RS07925 e12acc0ff33d2dc2d36907d2656fa544 322 PANTHER PTHR11405:SF16 1 315 5.9E-121 T 22-04-2016 SRM_RS07925 e12acc0ff33d2dc2d36907d2656fa544 322 PANTHER PTHR11405 1 315 5.9E-121 T 22-04-2016 SRM_RS07925 e12acc0ff33d2dc2d36907d2656fa544 322 PRINTS PR00101 Aspartate carbamoyltransferase signature 55 77 1.6E-28 T 22-04-2016 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|UniPathway: UPA00070 SRM_RS07925 e12acc0ff33d2dc2d36907d2656fa544 322 PRINTS PR00101 Aspartate carbamoyltransferase signature 233 242 1.6E-28 T 22-04-2016 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|UniPathway: UPA00070 SRM_RS07925 e12acc0ff33d2dc2d36907d2656fa544 322 PRINTS PR00101 Aspartate carbamoyltransferase signature 93 102 1.6E-28 T 22-04-2016 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|UniPathway: UPA00070 SRM_RS07925 e12acc0ff33d2dc2d36907d2656fa544 322 PRINTS PR00101 Aspartate carbamoyltransferase signature 148 165 1.6E-28 T 22-04-2016 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|UniPathway: UPA00070 SRM_RS07925 e12acc0ff33d2dc2d36907d2656fa544 322 PRINTS PR00101 Aspartate carbamoyltransferase signature 297 311 1.6E-28 T 22-04-2016 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|UniPathway: UPA00070 SRM_RS07925 e12acc0ff33d2dc2d36907d2656fa544 322 PRINTS PR00101 Aspartate carbamoyltransferase signature 273 278 1.6E-28 T 22-04-2016 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|UniPathway: UPA00070 SRM_RS07925 e12acc0ff33d2dc2d36907d2656fa544 322 TIGRFAM TIGR00670 asp_carb_tr: aspartate carbamoyltransferase 19 315 1.7E-93 T 22-04-2016 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|UniPathway: UPA00070 SRM_RS07925 e12acc0ff33d2dc2d36907d2656fa544 322 Pfam PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain 169 314 9.0E-24 T 22-04-2016 IPR006131 Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain GO:0006520|GO:0016597|GO:0016743 SRM_RS07925 e12acc0ff33d2dc2d36907d2656fa544 322 Gene3D G3DSA:3.40.50.1370 157 295 6.0E-44 T 22-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 SRM_RS07925 e12acc0ff33d2dc2d36907d2656fa544 322 Gene3D G3DSA:3.40.50.1370 16 156 5.9E-46 T 22-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 SRM_RS07925 e12acc0ff33d2dc2d36907d2656fa544 322 Hamap MF_00001 Aspartate carbamoyltransferase [pyrB]. 18 318 39.128 T 22-04-2016 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|UniPathway: UPA00070 SRM_RS07925 e12acc0ff33d2dc2d36907d2656fa544 322 ProSitePatterns PS00097 Aspartate and ornithine carbamoyltransferases signature. 65 72 - T 22-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 SRM_RS07925 e12acc0ff33d2dc2d36907d2656fa544 322 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 281 304 3.1E-19 T 22-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 SRM_RS07925 e12acc0ff33d2dc2d36907d2656fa544 322 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 149 160 3.1E-19 T 22-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 SRM_RS07925 e12acc0ff33d2dc2d36907d2656fa544 322 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 65 84 3.1E-19 T 22-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 SRM_RS07925 e12acc0ff33d2dc2d36907d2656fa544 322 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 269 278 3.1E-19 T 22-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 SRM_RS10570 7ee3b140f09ad4f23dd55d73a11947ca 277 TIGRFAM TIGR00222 panB: 3-methyl-2-oxobutanoate hydroxymethyltransferase 18 277 5.8E-98 T 22-04-2016 IPR003700 Ketopantoate hydroxymethyltransferase GO:0003864|GO:0015940 KEGG: 00770+2.1.2.11|MetaCyc: PWY-6654|UniPathway: UPA00028 SRM_RS10570 7ee3b140f09ad4f23dd55d73a11947ca 277 PIRSF PIRSF000388 8 277 7.0E-106 T 22-04-2016 IPR003700 Ketopantoate hydroxymethyltransferase GO:0003864|GO:0015940 KEGG: 00770+2.1.2.11|MetaCyc: PWY-6654|UniPathway: UPA00028 SRM_RS10570 7ee3b140f09ad4f23dd55d73a11947ca 277 Pfam PF02548 Ketopantoate hydroxymethyltransferase 15 272 1.9E-112 T 22-04-2016 IPR003700 Ketopantoate hydroxymethyltransferase GO:0003864|GO:0015940 KEGG: 00770+2.1.2.11|MetaCyc: PWY-6654|UniPathway: UPA00028 SRM_RS10570 7ee3b140f09ad4f23dd55d73a11947ca 277 Hamap MF_00156 3-methyl-2-oxobutanoate hydroxymethyltransferase [panB]. 16 277 43.009 T 22-04-2016 IPR003700 Ketopantoate hydroxymethyltransferase GO:0003864|GO:0015940 KEGG: 00770+2.1.2.11|MetaCyc: PWY-6654|UniPathway: UPA00028 SRM_RS10570 7ee3b140f09ad4f23dd55d73a11947ca 277 Gene3D G3DSA:3.20.20.60 15 277 1.1E-115 T 22-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 SRM_RS10570 7ee3b140f09ad4f23dd55d73a11947ca 277 SUPERFAMILY SSF51621 15 277 4.71E-103 T 22-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 SRM_RS10570 7ee3b140f09ad4f23dd55d73a11947ca 277 PANTHER PTHR20881 15 277 3.5E-143 T 22-04-2016 IPR003700 Ketopantoate hydroxymethyltransferase GO:0003864|GO:0015940 KEGG: 00770+2.1.2.11|MetaCyc: PWY-6654|UniPathway: UPA00028 SRM_RS00960 39feb20f2462347e8af92bf71818587a 478 SMART SM00490 297 378 2.6E-28 T 22-04-2016 IPR001650 Helicase, C-terminal SRM_RS00960 39feb20f2462347e8af92bf71818587a 478 Gene3D G3DSA:3.40.50.300 256 413 2.2E-44 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SRM_RS00960 39feb20f2462347e8af92bf71818587a 478 ProSitePatterns PS00039 DEAD-box subfamily ATP-dependent helicases signature. 192 200 - T 22-04-2016 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site SRM_RS00960 39feb20f2462347e8af92bf71818587a 478 SUPERFAMILY SSF52540 110 398 3.54E-67 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SRM_RS00960 39feb20f2462347e8af92bf71818587a 478 SMART SM00487 60 256 2.1E-51 T 22-04-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain SRM_RS00960 39feb20f2462347e8af92bf71818587a 478 Pfam PF00271 Helicase conserved C-terminal domain 270 378 1.8E-26 T 22-04-2016 IPR001650 Helicase, C-terminal SRM_RS00960 39feb20f2462347e8af92bf71818587a 478 Gene3D G3DSA:3.40.50.300 49 251 1.5E-67 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SRM_RS00960 39feb20f2462347e8af92bf71818587a 478 Pfam PF00270 DEAD/DEAH box helicase 66 233 3.1E-47 T 22-04-2016 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 SRM_RS00960 39feb20f2462347e8af92bf71818587a 478 PANTHER PTHR24031 54 431 1.4E-139 T 22-04-2016 SRM_RS15255 a4eac006d0059670e1e5a5bc36447389 221 SUPERFAMILY SSF88946 27 128 7.38E-30 T 22-04-2016 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 SRM_RS15255 a4eac006d0059670e1e5a5bc36447389 221 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 45 209 5.0E-31 T 22-04-2016 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 SRM_RS15255 a4eac006d0059670e1e5a5bc36447389 221 Pfam PF04542 Sigma-70 region 2 50 118 1.8E-18 T 22-04-2016 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 SRM_RS15255 a4eac006d0059670e1e5a5bc36447389 221 Pfam PF08281 Sigma-70, region 4 156 207 7.2E-15 T 22-04-2016 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 SRM_RS15255 a4eac006d0059670e1e5a5bc36447389 221 SUPERFAMILY SSF88659 150 212 2.62E-15 T 22-04-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 SRM_RS15255 a4eac006d0059670e1e5a5bc36447389 221 Gene3D G3DSA:1.10.10.10 152 213 1.8E-21 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SRM_RS15255 a4eac006d0059670e1e5a5bc36447389 221 Gene3D G3DSA:1.10.1740.10 27 139 9.9E-34 T 22-04-2016 SRM_RS15255 a4eac006d0059670e1e5a5bc36447389 221 PANTHER PTHR30173 21 221 3.1E-51 T 22-04-2016 SRM_RS03040 857f683727a4740fda0643bad0a2f729 136 PANTHER PTHR33452 1 136 1.8E-13 T 22-04-2016 SRM_RS03040 857f683727a4740fda0643bad0a2f729 136 Pfam PF07681 DoxX 13 97 9.8E-11 T 22-04-2016 IPR032808 DoxX family SRM_RS12420 2155b70d2e9bd3adf689e083c8fb18b8 430 PANTHER PTHR11647 5 425 1.4E-158 T 22-04-2016 SRM_RS12420 2155b70d2e9bd3adf689e083c8fb18b8 430 Pfam PF01979 Amidohydrolase family 54 425 1.9E-26 T 22-04-2016 IPR006680 Amidohydrolase-related GO:0016787 SRM_RS12420 2155b70d2e9bd3adf689e083c8fb18b8 430 Hamap MF_00220_B Dihydroorotase [pyrC]. 4 429 39.294 T 22-04-2016 IPR004722 Dihydroorotase GO:0004151|GO:0006221|GO:0046872 KEGG: 00240+3.5.2.3|MetaCyc: PWY-5686|UniPathway: UPA00070 SRM_RS12420 2155b70d2e9bd3adf689e083c8fb18b8 430 SUPERFAMILY SSF51556 58 372 4.14E-98 T 22-04-2016 IPR032466 Metal-dependent hydrolase SRM_RS12420 2155b70d2e9bd3adf689e083c8fb18b8 430 SUPERFAMILY SSF51338 371 425 3.29E-21 T 22-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 SRM_RS12420 2155b70d2e9bd3adf689e083c8fb18b8 430 SUPERFAMILY SSF51338 4 57 3.29E-21 T 22-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 SRM_RS12420 2155b70d2e9bd3adf689e083c8fb18b8 430 PANTHER PTHR11647:SF70 5 425 1.4E-158 T 22-04-2016 SRM_RS12420 2155b70d2e9bd3adf689e083c8fb18b8 430 ProSitePatterns PS00482 Dihydroorotase signature 1. 61 69 - T 22-04-2016 IPR002195 Dihydroorotase, conserved site GO:0016812 KEGG: 00240+3.5.2.3|MetaCyc: PWY-5686|UniPathway: UPA00070 SRM_RS12420 2155b70d2e9bd3adf689e083c8fb18b8 430 Gene3D G3DSA:2.30.40.10 5 72 1.6E-20 T 22-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 SRM_RS12420 2155b70d2e9bd3adf689e083c8fb18b8 430 TIGRFAM TIGR00857 pyrC_multi: dihydroorotase, multifunctional complex type 21 425 1.3E-120 T 22-04-2016 IPR004722 Dihydroorotase GO:0004151|GO:0006221|GO:0046872 KEGG: 00240+3.5.2.3|MetaCyc: PWY-5686|UniPathway: UPA00070 SRM_RS12420 2155b70d2e9bd3adf689e083c8fb18b8 430 Gene3D G3DSA:3.20.20.140 73 409 2.1E-100 T 22-04-2016 SRM_RS06635 49d36581062307ba89e8764358adfefb 277 PANTHER PTHR30007:SF4 3 250 5.1E-60 T 22-04-2016 SRM_RS06635 49d36581062307ba89e8764358adfefb 277 SUPERFAMILY SSF89550 6 86 2.55E-47 T 22-04-2016 IPR016195 Polymerase/histidinol phosphatase-like GO:0003824 SRM_RS06635 49d36581062307ba89e8764358adfefb 277 SUPERFAMILY SSF89550 169 259 2.55E-47 T 22-04-2016 IPR016195 Polymerase/histidinol phosphatase-like GO:0003824 SRM_RS06635 49d36581062307ba89e8764358adfefb 277 Gene3D G3DSA:3.20.20.140 8 91 8.5E-41 T 22-04-2016 SRM_RS06635 49d36581062307ba89e8764358adfefb 277 Gene3D G3DSA:3.20.20.140 161 250 8.5E-41 T 22-04-2016 SRM_RS06635 49d36581062307ba89e8764358adfefb 277 PANTHER PTHR30007 3 250 5.1E-60 T 22-04-2016 SRM_RS06635 49d36581062307ba89e8764358adfefb 277 Pfam PF02811 PHP domain 9 136 2.7E-12 T 22-04-2016 IPR004013 PHP domain GO:0003824 SRM_RS06635 49d36581062307ba89e8764358adfefb 277 SMART SM00481 8 73 1.5E-22 T 22-04-2016 IPR003141 Polymerase/histidinol phosphatase, N-terminal GO:0003677|GO:0003887|GO:0006260 SRM_RS03940 18bed5e2e62930bf798f0a8f6b6e31b7 464 SUPERFAMILY SSF52413 314 437 1.7E-36 T 22-04-2016 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 SRM_RS03940 18bed5e2e62930bf798f0a8f6b6e31b7 464 SUPERFAMILY SSF48179 209 303 3.23E-31 T 22-04-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 SRM_RS03940 18bed5e2e62930bf798f0a8f6b6e31b7 464 Pfam PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain 209 301 8.9E-38 T 22-04-2016 IPR014026 UDP-glucose/GDP-mannose dehydrogenase, dimerisation GO:0016616|GO:0051287|GO:0055114 SRM_RS03940 18bed5e2e62930bf798f0a8f6b6e31b7 464 PANTHER PTHR11374 1 447 1.6E-230 T 22-04-2016 IPR017476 UDP-glucose/GDP-mannose dehydrogenase GO:0016616|GO:0055114 SRM_RS03940 18bed5e2e62930bf798f0a8f6b6e31b7 464 Pfam PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain 325 427 1.3E-29 T 22-04-2016 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 SRM_RS03940 18bed5e2e62930bf798f0a8f6b6e31b7 464 Gene3D G3DSA:3.40.50.720 240 446 7.9E-74 T 22-04-2016 IPR016040 NAD(P)-binding domain SRM_RS03940 18bed5e2e62930bf798f0a8f6b6e31b7 464 PANTHER PTHR11374:SF18 1 447 1.6E-230 T 22-04-2016 SRM_RS03940 18bed5e2e62930bf798f0a8f6b6e31b7 464 PIRSF PIRSF500134 1 445 9.1E-179 T 22-04-2016 IPR028357 UDP-glucose 6-dehydrogenase, bacterial type GO:0000271|GO:0003979 KEGG: 00040+1.1.1.22|KEGG: 00053+1.1.1.22|KEGG: 00500+1.1.1.22|KEGG: 00520+1.1.1.22|MetaCyc: PWY-7346|UniPathway: UPA00038 SRM_RS03940 18bed5e2e62930bf798f0a8f6b6e31b7 464 PIRSF PIRSF000124 1 442 6.3E-143 T 22-04-2016 IPR017476 UDP-glucose/GDP-mannose dehydrogenase GO:0016616|GO:0055114 SRM_RS03940 18bed5e2e62930bf798f0a8f6b6e31b7 464 SMART SM00984 325 427 4.2E-48 T 22-04-2016 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 SRM_RS03940 18bed5e2e62930bf798f0a8f6b6e31b7 464 SUPERFAMILY SSF51735 1 199 4.73E-54 T 22-04-2016 IPR016040 NAD(P)-binding domain SRM_RS03940 18bed5e2e62930bf798f0a8f6b6e31b7 464 Pfam PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain 1 191 1.3E-61 T 22-04-2016 IPR001732 UDP-glucose/GDP-mannose dehydrogenase, N-terminal GO:0016616|GO:0051287|GO:0055114 SRM_RS03940 18bed5e2e62930bf798f0a8f6b6e31b7 464 Gene3D G3DSA:3.40.50.720 1 212 1.0E-74 T 22-04-2016 IPR016040 NAD(P)-binding domain SRM_RS03940 18bed5e2e62930bf798f0a8f6b6e31b7 464 TIGRFAM TIGR03026 NDP-sugDHase: nucleotide sugar dehydrogenase 1 423 9.5E-133 T 22-04-2016 IPR017476 UDP-glucose/GDP-mannose dehydrogenase GO:0016616|GO:0055114 SRM_RS03940 18bed5e2e62930bf798f0a8f6b6e31b7 464 Gene3D G3DSA:1.20.5.100 213 237 1.5E-18 T 22-04-2016 SRM_RS14315 927dabca3e2afa1bc6647a60bd0f9159 679 Gene3D G3DSA:3.30.450.20 311 335 1.3E-4 T 22-04-2016 SRM_RS14315 927dabca3e2afa1bc6647a60bd0f9159 679 Pfam PF08448 PAS fold 211 323 1.5E-9 T 22-04-2016 IPR013656 PAS fold-4 SRM_RS14315 927dabca3e2afa1bc6647a60bd0f9159 679 SUPERFAMILY SSF47384 485 577 2.16E-17 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SRM_RS14315 927dabca3e2afa1bc6647a60bd0f9159 679 SUPERFAMILY SSF55781 352 490 6.28E-9 T 22-04-2016 IPR029016 GAF domain-like SRM_RS14315 927dabca3e2afa1bc6647a60bd0f9159 679 Gene3D G3DSA:1.10.287.130 493 571 1.3E-15 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SRM_RS14315 927dabca3e2afa1bc6647a60bd0f9159 679 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 201 328 1.4E-7 T 22-04-2016 IPR000014 PAS domain SRM_RS14315 927dabca3e2afa1bc6647a60bd0f9159 679 SMART SM00388 500 575 1.3E-15 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SRM_RS14315 927dabca3e2afa1bc6647a60bd0f9159 679 Pfam PF00512 His Kinase A (phospho-acceptor) domain 501 575 1.3E-13 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SRM_RS14315 927dabca3e2afa1bc6647a60bd0f9159 679 Pfam PF13185 GAF domain 351 479 2.8E-9 T 22-04-2016 IPR003018 GAF domain GO:0005515 SRM_RS14315 927dabca3e2afa1bc6647a60bd0f9159 679 SUPERFAMILY SSF55785 192 319 2.86E-9 T 22-04-2016 IPR000014 PAS domain SRM_RS14315 927dabca3e2afa1bc6647a60bd0f9159 679 Gene3D G3DSA:3.30.450.20 196 310 1.8E-10 T 22-04-2016 SRM_RS14315 927dabca3e2afa1bc6647a60bd0f9159 679 PANTHER PTHR24423 6 13 2.4E-38 T 22-04-2016 SRM_RS14315 927dabca3e2afa1bc6647a60bd0f9159 679 PANTHER PTHR24423 479 611 2.4E-38 T 22-04-2016 SRM_RS14315 927dabca3e2afa1bc6647a60bd0f9159 679 PANTHER PTHR24423 188 319 2.4E-38 T 22-04-2016 SRM_RS14315 927dabca3e2afa1bc6647a60bd0f9159 679 Gene3D G3DSA:3.30.450.40 336 492 1.0E-10 T 22-04-2016 IPR029016 GAF domain-like SRM_RS07230 0403d639a0a548b026dd147fe665b194 334 SUPERFAMILY SSF51735 3 170 1.79E-61 T 22-04-2016 IPR016040 NAD(P)-binding domain SRM_RS07230 0403d639a0a548b026dd147fe665b194 334 ProSitePatterns PS00071 Glyceraldehyde 3-phosphate dehydrogenase active site. 152 159 - T 22-04-2016 IPR020830 Glyceraldehyde 3-phosphate dehydrogenase, active site GO:0016620|GO:0055114 Reactome: REACT_474 SRM_RS07230 0403d639a0a548b026dd147fe665b194 334 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 148 166 3.5E-41 T 22-04-2016 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: REACT_474 SRM_RS07230 0403d639a0a548b026dd147fe665b194 334 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 175 191 3.5E-41 T 22-04-2016 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: REACT_474 SRM_RS07230 0403d639a0a548b026dd147fe665b194 334 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 271 286 3.5E-41 T 22-04-2016 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: REACT_474 SRM_RS07230 0403d639a0a548b026dd147fe665b194 334 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 111 124 3.5E-41 T 22-04-2016 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: REACT_474 SRM_RS07230 0403d639a0a548b026dd147fe665b194 334 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 231 248 3.5E-41 T 22-04-2016 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: REACT_474 SRM_RS07230 0403d639a0a548b026dd147fe665b194 334 PIRSF PIRSF000149 1 334 5.6E-133 T 22-04-2016 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: REACT_474 SRM_RS07230 0403d639a0a548b026dd147fe665b194 334 SUPERFAMILY SSF55347 154 315 1.52E-69 T 22-04-2016 SRM_RS07230 0403d639a0a548b026dd147fe665b194 334 PANTHER PTHR10836 1 333 1.7E-190 T 22-04-2016 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: REACT_474 SRM_RS07230 0403d639a0a548b026dd147fe665b194 334 SMART SM00846 3 154 1.1E-89 T 22-04-2016 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain GO:0016620|GO:0055114 Reactome: REACT_474 SRM_RS07230 0403d639a0a548b026dd147fe665b194 334 Gene3D G3DSA:3.40.50.720 3 162 1.6E-72 T 22-04-2016 IPR016040 NAD(P)-binding domain SRM_RS07230 0403d639a0a548b026dd147fe665b194 334 Pfam PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain 3 154 6.8E-58 T 22-04-2016 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain GO:0016620|GO:0055114 Reactome: REACT_474 SRM_RS07230 0403d639a0a548b026dd147fe665b194 334 TIGRFAM TIGR01534 GAPDH-I: glyceraldehyde-3-phosphate dehydrogenase, type I 4 326 3.4E-132 T 22-04-2016 IPR006424 Glyceraldehyde-3-phosphate dehydrogenase, type I GO:0006006|GO:0016620|GO:0050661|GO:0051287|GO:0055114 KEGG: 00010+1.2.1.12|KEGG: 00710+1.2.1.12|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: REACT_474|UniPathway: UPA00109 SRM_RS07230 0403d639a0a548b026dd147fe665b194 334 PANTHER PTHR10836:SF50 1 333 1.7E-190 T 22-04-2016 SRM_RS07230 0403d639a0a548b026dd147fe665b194 334 Pfam PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain 159 314 1.3E-65 T 22-04-2016 IPR020829 Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain GO:0016620|GO:0055114 Reactome: REACT_474 SRM_RS07230 0403d639a0a548b026dd147fe665b194 334 Gene3D G3DSA:3.30.360.10 163 316 1.0E-73 T 22-04-2016 SRM_RS06830 e1c4f9a0d4c1f36ae24e29362a792509 429 Gene3D G3DSA:2.30.40.10 329 425 4.4E-17 T 22-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 SRM_RS06830 e1c4f9a0d4c1f36ae24e29362a792509 429 SUPERFAMILY SSF51556 108 390 7.94E-22 T 22-04-2016 IPR032466 Metal-dependent hydrolase SRM_RS06830 e1c4f9a0d4c1f36ae24e29362a792509 429 Gene3D G3DSA:2.30.40.10 57 171 2.3E-11 T 22-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 SRM_RS06830 e1c4f9a0d4c1f36ae24e29362a792509 429 PANTHER PTHR11271 65 409 2.4E-23 T 22-04-2016 SRM_RS06830 e1c4f9a0d4c1f36ae24e29362a792509 429 SUPERFAMILY SSF51338 62 109 4.46E-14 T 22-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 SRM_RS06830 e1c4f9a0d4c1f36ae24e29362a792509 429 SUPERFAMILY SSF51338 390 425 4.46E-14 T 22-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 SRM_RS06830 e1c4f9a0d4c1f36ae24e29362a792509 429 PANTHER PTHR11271:SF39 65 409 2.4E-23 T 22-04-2016 SRM_RS06830 e1c4f9a0d4c1f36ae24e29362a792509 429 Pfam PF07969 Amidohydrolase family 362 424 2.0E-9 T 22-04-2016 IPR013108 Amidohydrolase 3 SRM_RS04665 6af409a9d98a5a17150a383c901b035e 284 Hamap MF_00061 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase [ispE]. 3 277 28.709 T 22-04-2016 IPR004424 4-diphosphocytidyl-2C-methyl-D-erythritol kinase GO:0016114|GO:0050515 KEGG: 00710+2.7.1.14|KEGG: 00900+2.7.1.148|MetaCyc: PWY-7560|UniPathway: UPA00056 SRM_RS04665 6af409a9d98a5a17150a383c901b035e 284 SUPERFAMILY SSF54211 6 156 5.09E-38 T 22-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold SRM_RS04665 6af409a9d98a5a17150a383c901b035e 284 Gene3D G3DSA:3.30.230.10 6 157 1.1E-47 T 22-04-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup SRM_RS04665 6af409a9d98a5a17150a383c901b035e 284 PIRSF PIRSF010376 2 280 1.3E-72 T 22-04-2016 IPR004424 4-diphosphocytidyl-2C-methyl-D-erythritol kinase GO:0016114|GO:0050515 KEGG: 00710+2.7.1.14|KEGG: 00900+2.7.1.148|MetaCyc: PWY-7560|UniPathway: UPA00056 SRM_RS04665 6af409a9d98a5a17150a383c901b035e 284 Pfam PF08544 GHMP kinases C terminal 199 268 2.3E-7 T 22-04-2016 IPR013750 GHMP kinase, C-terminal domain SRM_RS04665 6af409a9d98a5a17150a383c901b035e 284 Gene3D G3DSA:3.30.70.890 168 276 3.4E-22 T 22-04-2016 IPR013750 GHMP kinase, C-terminal domain SRM_RS04665 6af409a9d98a5a17150a383c901b035e 284 TIGRFAM TIGR00154 ispE: 4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase 3 268 5.5E-57 T 22-04-2016 IPR004424 4-diphosphocytidyl-2C-methyl-D-erythritol kinase GO:0016114|GO:0050515 KEGG: 00710+2.7.1.14|KEGG: 00900+2.7.1.148|MetaCyc: PWY-7560|UniPathway: UPA00056 SRM_RS04665 6af409a9d98a5a17150a383c901b035e 284 PANTHER PTHR20861:SF2 7 271 8.3E-76 T 22-04-2016 IPR004424 4-diphosphocytidyl-2C-methyl-D-erythritol kinase GO:0016114|GO:0050515 KEGG: 00710+2.7.1.14|KEGG: 00900+2.7.1.148|MetaCyc: PWY-7560|UniPathway: UPA00056 SRM_RS04665 6af409a9d98a5a17150a383c901b035e 284 Pfam PF00288 GHMP kinases N terminal domain 84 139 1.0E-10 T 22-04-2016 IPR006204 GHMP kinase N-terminal domain GO:0005524 SRM_RS04665 6af409a9d98a5a17150a383c901b035e 284 PANTHER PTHR20861 7 271 8.3E-76 T 22-04-2016 SRM_RS04665 6af409a9d98a5a17150a383c901b035e 284 SUPERFAMILY SSF55060 169 272 2.54E-16 T 22-04-2016 IPR013750 GHMP kinase, C-terminal domain SRM_RS10055 a1f798ce473e1bb47384e3962a19d2de 447 Hamap MF_00323 Ferrochelatase [hemH]. 33 360 28.891 T 22-04-2016 IPR001015 Ferrochelatase GO:0004325|GO:0006783 KEGG: 00860+4.99.1.1|UniPathway: UPA00252 SRM_RS10055 a1f798ce473e1bb47384e3962a19d2de 447 TIGRFAM TIGR00109 hemH: ferrochelatase 34 360 5.6E-70 T 22-04-2016 IPR001015 Ferrochelatase GO:0004325|GO:0006783 KEGG: 00860+4.99.1.1|UniPathway: UPA00252 SRM_RS10055 a1f798ce473e1bb47384e3962a19d2de 447 Gene3D G3DSA:3.40.50.1400 251 359 3.2E-18 T 22-04-2016 SRM_RS10055 a1f798ce473e1bb47384e3962a19d2de 447 Gene3D G3DSA:3.40.50.1400 34 250 1.1E-47 T 22-04-2016 SRM_RS10055 a1f798ce473e1bb47384e3962a19d2de 447 Pfam PF00762 Ferrochelatase 35 357 4.1E-91 T 22-04-2016 IPR001015 Ferrochelatase GO:0004325|GO:0006783 KEGG: 00860+4.99.1.1|UniPathway: UPA00252 SRM_RS10055 a1f798ce473e1bb47384e3962a19d2de 447 SUPERFAMILY SSF53800 33 361 2.09E-87 T 22-04-2016 SRM_RS10055 a1f798ce473e1bb47384e3962a19d2de 447 PANTHER PTHR11108:SF1 34 352 1.1E-88 T 22-04-2016 SRM_RS10055 a1f798ce473e1bb47384e3962a19d2de 447 PANTHER PTHR11108 34 352 1.1E-88 T 22-04-2016 IPR001015 Ferrochelatase GO:0004325|GO:0006783 KEGG: 00860+4.99.1.1|UniPathway: UPA00252 SRM_RS01040 0b1e5600e895c243f9faa20615bbd5a8 159 SUPERFAMILY SSF46689 70 158 6.45E-8 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 SRM_RS01040 0b1e5600e895c243f9faa20615bbd5a8 159 Pfam PF13518 Helix-turn-helix domain 71 97 6.5E-6 T 22-04-2016 SRM_RS15680 3f25c2ffc2ef874d68fcf712dd24297f 866 PRINTS PR00133 Glycosyl hydrolase family 3 signature 304 320 2.8E-22 T 22-04-2016 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 SRM_RS15680 3f25c2ffc2ef874d68fcf712dd24297f 866 PRINTS PR00133 Glycosyl hydrolase family 3 signature 267 283 2.8E-22 T 22-04-2016 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 SRM_RS15680 3f25c2ffc2ef874d68fcf712dd24297f 866 PRINTS PR00133 Glycosyl hydrolase family 3 signature 197 213 2.8E-22 T 22-04-2016 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 SRM_RS15680 3f25c2ffc2ef874d68fcf712dd24297f 866 PRINTS PR00133 Glycosyl hydrolase family 3 signature 221 240 2.8E-22 T 22-04-2016 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 SRM_RS15680 3f25c2ffc2ef874d68fcf712dd24297f 866 PRINTS PR00133 Glycosyl hydrolase family 3 signature 374 392 2.8E-22 T 22-04-2016 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 SRM_RS15680 3f25c2ffc2ef874d68fcf712dd24297f 866 Gene3D G3DSA:3.20.20.300 104 476 4.8E-122 T 22-04-2016 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 SRM_RS15680 3f25c2ffc2ef874d68fcf712dd24297f 866 Gene3D G3DSA:3.40.50.1700 481 729 1.2E-61 T 22-04-2016 IPR002772 Glycoside hydrolase family 3 C-terminal domain GO:0004553|GO:0005975 SRM_RS15680 3f25c2ffc2ef874d68fcf712dd24297f 866 Pfam PF00933 Glycosyl hydrolase family 3 N terminal domain 118 456 6.3E-85 T 22-04-2016 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 SRM_RS15680 3f25c2ffc2ef874d68fcf712dd24297f 866 SUPERFAMILY SSF51445 105 492 1.05E-113 T 22-04-2016 IPR017853 Glycoside hydrolase superfamily SRM_RS15680 3f25c2ffc2ef874d68fcf712dd24297f 866 SUPERFAMILY SSF52279 493 729 4.18E-51 T 22-04-2016 IPR002772 Glycoside hydrolase family 3 C-terminal domain GO:0004553|GO:0005975 SRM_RS15680 3f25c2ffc2ef874d68fcf712dd24297f 866 PANTHER PTHR30620 181 851 2.1E-251 T 22-04-2016 IPR026892 Glycoside hydrolase family 3 GO:0004553 SRM_RS15680 3f25c2ffc2ef874d68fcf712dd24297f 866 PANTHER PTHR30620 106 133 2.1E-251 T 22-04-2016 IPR026892 Glycoside hydrolase family 3 GO:0004553 SRM_RS15680 3f25c2ffc2ef874d68fcf712dd24297f 866 Pfam PF01915 Glycosyl hydrolase family 3 C-terminal domain 494 726 1.3E-40 T 22-04-2016 IPR002772 Glycoside hydrolase family 3 C-terminal domain GO:0004553|GO:0005975 SRM_RS15680 3f25c2ffc2ef874d68fcf712dd24297f 866 Pfam PF14310 Fibronectin type III-like domain 768 835 7.7E-16 T 22-04-2016 IPR026891 Fibronectin type III-like domain SRM_RS15680 3f25c2ffc2ef874d68fcf712dd24297f 866 SMART SM01217 768 837 1.1E-22 T 22-04-2016 IPR026891 Fibronectin type III-like domain SRM_RS15680 3f25c2ffc2ef874d68fcf712dd24297f 866 PANTHER PTHR30620:SF16 181 851 2.1E-251 T 22-04-2016 SRM_RS15680 3f25c2ffc2ef874d68fcf712dd24297f 866 PANTHER PTHR30620:SF16 106 133 2.1E-251 T 22-04-2016 SRM_RS03055 13555905d83750586f4ae93a95797ed7 198 PANTHER PTHR11019:SF112 111 144 4.5E-54 T 22-04-2016 SRM_RS03055 13555905d83750586f4ae93a95797ed7 198 PANTHER PTHR11019:SF112 3 93 4.5E-54 T 22-04-2016 SRM_RS03055 13555905d83750586f4ae93a95797ed7 198 TIGRFAM TIGR01382 PfpI: intracellular protease, PfpI family 5 186 1.2E-58 T 22-04-2016 IPR006286 Peptidase C56, PfpI GO:0016798 SRM_RS03055 13555905d83750586f4ae93a95797ed7 198 SUPERFAMILY SSF52317 3 187 4.14E-53 T 22-04-2016 IPR029062 Class I glutamine amidotransferase-like SRM_RS03055 13555905d83750586f4ae93a95797ed7 198 Pfam PF01965 DJ-1/PfpI family 3 183 1.2E-52 T 22-04-2016 IPR002818 DJ-1/PfpI SRM_RS03055 13555905d83750586f4ae93a95797ed7 198 PANTHER PTHR11019 111 144 4.5E-54 T 22-04-2016 SRM_RS03055 13555905d83750586f4ae93a95797ed7 198 PANTHER PTHR11019 3 93 4.5E-54 T 22-04-2016 SRM_RS03055 13555905d83750586f4ae93a95797ed7 198 Gene3D G3DSA:3.40.50.880 1 186 3.8E-58 T 22-04-2016 IPR029062 Class I glutamine amidotransferase-like SRM_RS12625 9e0c255749c9574df9a6fefa9d2ce54b 306 Gene3D G3DSA:3.90.79.10 186 270 1.5E-18 T 22-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 SRM_RS12625 9e0c255749c9574df9a6fefa9d2ce54b 306 SUPERFAMILY SSF55811 174 278 2.3E-20 T 22-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 SRM_RS12625 9e0c255749c9574df9a6fefa9d2ce54b 306 ProSitePatterns PS00893 Nudix box signature. 200 221 - T 22-04-2016 IPR020084 NUDIX hydrolase, conserved site GO:0016787 SRM_RS12625 9e0c255749c9574df9a6fefa9d2ce54b 306 Pfam PF00293 NUDIX domain 191 261 4.4E-13 T 22-04-2016 IPR000086 NUDIX hydrolase domain GO:0016787 SRM_RS12625 9e0c255749c9574df9a6fefa9d2ce54b 306 PRINTS PR00502 NUDIX hydrolase family signature 209 224 1.7E-5 T 22-04-2016 IPR020476 NUDIX hydrolase SRM_RS12625 9e0c255749c9574df9a6fefa9d2ce54b 306 PRINTS PR00502 NUDIX hydrolase family signature 195 209 1.7E-5 T 22-04-2016 IPR020476 NUDIX hydrolase SRM_RS07295 fff9a5e4882ebd57d238173b6c61a65f 856 PANTHER PTHR10909 38 518 1.3E-186 T 22-04-2016 SRM_RS07295 fff9a5e4882ebd57d238173b6c61a65f 856 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 225 322 4.0E-16 T 22-04-2016 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0003995|GO:0055114 SRM_RS07295 fff9a5e4882ebd57d238173b6c61a65f 856 Gene3D G3DSA:2.40.110.10 225 331 2.2E-19 T 22-04-2016 SRM_RS07295 fff9a5e4882ebd57d238173b6c61a65f 856 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 116 221 5.9E-20 T 22-04-2016 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 SRM_RS07295 fff9a5e4882ebd57d238173b6c61a65f 856 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 345 465 4.1E-11 T 22-04-2016 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 SRM_RS07295 fff9a5e4882ebd57d238173b6c61a65f 856 Pfam PF09317 Domain of unknown function (DUF1974) 499 781 5.7E-103 T 22-04-2016 IPR015396 Acyl-CoA dehydrogenase, C-termina, bacterial type GO:0003995|GO:0033539|GO:0055114 KEGG: 00071+1.3.99.-|KEGG: 00280+1.3.99.-|KEGG: 00281+1.3.99.-|KEGG: 00362+1.3.99.-|KEGG: 00626+1.3.99.-|KEGG: 00930+1.3.99.-|UniPathway: UPA00659 SRM_RS07295 fff9a5e4882ebd57d238173b6c61a65f 856 Gene3D G3DSA:1.20.140.10 332 489 2.2E-23 T 22-04-2016 SRM_RS07295 fff9a5e4882ebd57d238173b6c61a65f 856 Gene3D G3DSA:1.10.540.10 84 222 6.1E-31 T 22-04-2016 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 SRM_RS07295 fff9a5e4882ebd57d238173b6c61a65f 856 SUPERFAMILY SSF56645 107 340 7.85E-50 T 22-04-2016 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain GO:0008152|GO:0016627|GO:0055114 SRM_RS07295 fff9a5e4882ebd57d238173b6c61a65f 856 PANTHER PTHR10909:SF283 38 518 1.3E-186 T 22-04-2016 SRM_RS07295 fff9a5e4882ebd57d238173b6c61a65f 856 SUPERFAMILY SSF47203 345 500 4.03E-22 T 22-04-2016 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 SRM_RS07295 fff9a5e4882ebd57d238173b6c61a65f 856 ProSitePatterns PS00072 Acyl-CoA dehydrogenases signature 1. 227 239 - T 22-04-2016 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 SRM_RS11235 4b13d4ac26e2f1fd1bd9e08d20b9706a 267 SUPERFAMILY SSF56300 1 244 2.99E-45 T 22-04-2016 IPR029052 Metallo-dependent phosphatase-like SRM_RS11235 4b13d4ac26e2f1fd1bd9e08d20b9706a 267 Gene3D G3DSA:3.60.21.10 1 246 2.8E-33 T 22-04-2016 IPR029052 Metallo-dependent phosphatase-like SRM_RS11235 4b13d4ac26e2f1fd1bd9e08d20b9706a 267 PANTHER PTHR12905 1 232 5.6E-24 T 22-04-2016 SRM_RS11235 4b13d4ac26e2f1fd1bd9e08d20b9706a 267 PANTHER PTHR12905:SF17 1 232 5.6E-24 T 22-04-2016 SRM_RS11235 4b13d4ac26e2f1fd1bd9e08d20b9706a 267 Pfam PF00149 Calcineurin-like phosphoesterase 1 193 2.7E-15 T 22-04-2016 IPR004843 Calcineurin-like phosphoesterase domain, apaH type GO:0016787 SRM_RS10015 b28e8f64320364b07f90b62f3abcde5d 286 SUPERFAMILY SSF51366 5 270 1.41E-72 T 22-04-2016 IPR011060 Ribulose-phosphate binding barrel GO:0003824|GO:0008152 SRM_RS10015 b28e8f64320364b07f90b62f3abcde5d 286 Gene3D G3DSA:3.20.20.70 8 270 7.2E-65 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 SRM_RS10015 b28e8f64320364b07f90b62f3abcde5d 286 TIGRFAM TIGR02127 pyrF_sub2: orotidine 5'-phosphate decarboxylase 5 258 7.0E-73 T 22-04-2016 IPR011995 Orotidine 5'-phosphate decarboxylase, type 2 GO:0004590|GO:0006221 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|UniPathway: UPA00070 SRM_RS10015 b28e8f64320364b07f90b62f3abcde5d 286 Pfam PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family 19 255 3.0E-27 T 22-04-2016 IPR001754 Orotidine 5'-phosphate decarboxylase domain GO:0004590|GO:0006207 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|UniPathway: UPA00070 SRM_RS10015 b28e8f64320364b07f90b62f3abcde5d 286 PANTHER PTHR19278:SF1 4 27 3.8E-59 T 22-04-2016 SRM_RS10015 b28e8f64320364b07f90b62f3abcde5d 286 PANTHER PTHR19278:SF1 45 231 3.8E-59 T 22-04-2016 SRM_RS10015 b28e8f64320364b07f90b62f3abcde5d 286 PANTHER PTHR19278 4 27 3.8E-59 T 22-04-2016 SRM_RS10015 b28e8f64320364b07f90b62f3abcde5d 286 PANTHER PTHR19278 45 231 3.8E-59 T 22-04-2016 SRM_RS10015 b28e8f64320364b07f90b62f3abcde5d 286 SMART SM00934 19 260 1.2E-39 T 22-04-2016 IPR001754 Orotidine 5'-phosphate decarboxylase domain GO:0004590|GO:0006207 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|UniPathway: UPA00070 SRM_RS10355 08f74a39492194139f90495f2aadc31c 256 Pfam PF00970 Oxidoreductase FAD-binding domain 10 93 2.1E-5 T 22-04-2016 IPR008333 Oxidoreductase, FAD-binding domain SRM_RS10355 08f74a39492194139f90495f2aadc31c 256 PANTHER PTHR19370 16 243 7.4E-28 T 22-04-2016 SRM_RS10355 08f74a39492194139f90495f2aadc31c 256 SUPERFAMILY SSF52343 108 248 3.93E-23 T 22-04-2016 SRM_RS10355 08f74a39492194139f90495f2aadc31c 256 PANTHER PTHR19370:SF98 16 243 7.4E-28 T 22-04-2016 SRM_RS10355 08f74a39492194139f90495f2aadc31c 256 Gene3D G3DSA:2.40.30.10 6 96 4.6E-20 T 22-04-2016 SRM_RS10355 08f74a39492194139f90495f2aadc31c 256 SUPERFAMILY SSF63380 6 105 1.04E-18 T 22-04-2016 IPR017938 Riboflavin synthase-like beta-barrel GO:0016491|GO:0055114 SRM_RS10355 08f74a39492194139f90495f2aadc31c 256 Pfam PF00175 Oxidoreductase NAD-binding domain 114 230 3.0E-9 T 22-04-2016 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 SRM_RS10355 08f74a39492194139f90495f2aadc31c 256 Gene3D G3DSA:3.40.50.80 101 249 5.4E-29 T 22-04-2016 SRM_RS03070 552271206d758a466a6d10a1c347f813 365 Gene3D G3DSA:3.40.50.300 36 268 1.5E-74 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SRM_RS03070 552271206d758a466a6d10a1c347f813 365 TIGRFAM TIGR01186 proV: glycine betaine/L-proline transport ATP binding subunit 36 283 1.0E-108 T 22-04-2016 IPR005892 Glycine betaine transport ATP-binding subunit GO:0005524|GO:0016020|GO:0031460 SRM_RS03070 552271206d758a466a6d10a1c347f813 365 SMART SM00382 52 243 3.3E-16 T 22-04-2016 IPR003593 AAA+ ATPase domain SRM_RS03070 552271206d758a466a6d10a1c347f813 365 SUPERFAMILY SSF52540 39 271 1.21E-72 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SRM_RS03070 552271206d758a466a6d10a1c347f813 365 PANTHER PTHR24220 40 273 1.1E-145 T 22-04-2016 SRM_RS03070 552271206d758a466a6d10a1c347f813 365 PANTHER PTHR24220 5 15 1.1E-145 T 22-04-2016 SRM_RS03070 552271206d758a466a6d10a1c347f813 365 Pfam PF00005 ABC transporter 44 191 3.1E-31 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 SRM_RS03070 552271206d758a466a6d10a1c347f813 365 ProSitePatterns PS00211 ABC transporters family signature. 164 178 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 SRM_RS03070 552271206d758a466a6d10a1c347f813 365 PANTHER PTHR24220:SF374 40 273 1.1E-145 T 22-04-2016 SRM_RS03070 552271206d758a466a6d10a1c347f813 365 PANTHER PTHR24220:SF374 5 15 1.1E-145 T 22-04-2016 SRM_RS03070 552271206d758a466a6d10a1c347f813 365 SUPERFAMILY SSF54631 274 345 2.15E-5 T 22-04-2016 SRM_RS08755 b1966ae7168eb0a3c103a7bd924cf068 510 PANTHER PTHR10668 1 509 6.6E-145 T 22-04-2016 SRM_RS08755 b1966ae7168eb0a3c103a7bd924cf068 510 Gene3D G3DSA:3.50.50.60 1 58 4.4E-30 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SRM_RS08755 b1966ae7168eb0a3c103a7bd924cf068 510 Gene3D G3DSA:3.50.50.60 110 111 4.4E-30 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SRM_RS08755 b1966ae7168eb0a3c103a7bd924cf068 510 Gene3D G3DSA:3.50.50.60 208 299 4.4E-30 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SRM_RS08755 b1966ae7168eb0a3c103a7bd924cf068 510 SUPERFAMILY SSF51905 465 507 1.22E-43 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SRM_RS08755 b1966ae7168eb0a3c103a7bd924cf068 510 SUPERFAMILY SSF51905 1 323 1.22E-43 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SRM_RS08755 b1966ae7168eb0a3c103a7bd924cf068 510 Pfam PF01593 Flavin containing amine oxidoreductase 16 283 2.2E-12 T 22-04-2016 IPR002937 Amine oxidase GO:0016491|GO:0055114 SRM_RS08755 b1966ae7168eb0a3c103a7bd924cf068 510 PANTHER PTHR10668:SF83 1 509 6.6E-145 T 22-04-2016 SRM_RS11210 7265606c8c21a3c6de8b18b5ddca4485 629 PRINTS PR01042 Aspartyl-tRNA synthetase signature 500 516 6.2E-25 T 22-04-2016 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 SRM_RS11210 7265606c8c21a3c6de8b18b5ddca4485 629 PRINTS PR01042 Aspartyl-tRNA synthetase signature 230 243 6.2E-25 T 22-04-2016 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 SRM_RS11210 7265606c8c21a3c6de8b18b5ddca4485 629 PRINTS PR01042 Aspartyl-tRNA synthetase signature 213 225 6.2E-25 T 22-04-2016 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 SRM_RS11210 7265606c8c21a3c6de8b18b5ddca4485 629 PRINTS PR01042 Aspartyl-tRNA synthetase signature 544 558 6.2E-25 T 22-04-2016 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 SRM_RS11210 7265606c8c21a3c6de8b18b5ddca4485 629 PANTHER PTHR22594:SF5 1 320 2.9E-244 T 22-04-2016 IPR004524 Aspartate-tRNA ligase, bacterial/mitochondrial-type GO:0005524|GO:0016874 SRM_RS11210 7265606c8c21a3c6de8b18b5ddca4485 629 PANTHER PTHR22594:SF5 392 597 2.9E-244 T 22-04-2016 IPR004524 Aspartate-tRNA ligase, bacterial/mitochondrial-type GO:0005524|GO:0016874 SRM_RS11210 7265606c8c21a3c6de8b18b5ddca4485 629 Pfam PF00152 tRNA synthetases class II (D, K and N) 141 584 1.7E-105 T 22-04-2016 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 SRM_RS11210 7265606c8c21a3c6de8b18b5ddca4485 629 TIGRFAM TIGR00459 aspS_bact: aspartate--tRNA ligase 18 608 1.0E-218 T 22-04-2016 IPR004524 Aspartate-tRNA ligase, bacterial/mitochondrial-type GO:0005524|GO:0016874 SRM_RS11210 7265606c8c21a3c6de8b18b5ddca4485 629 Pfam PF01336 OB-fold nucleic acid binding domain 34 118 1.7E-14 T 22-04-2016 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type GO:0003676 SRM_RS11210 7265606c8c21a3c6de8b18b5ddca4485 629 Gene3D G3DSA:2.40.50.140 18 125 1.0E-36 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold SRM_RS11210 7265606c8c21a3c6de8b18b5ddca4485 629 Gene3D G3DSA:3.30.1360.30 300 435 8.0E-34 T 22-04-2016 IPR004115 GAD-like domain GO:0004812|GO:0005524|GO:0005737 SRM_RS11210 7265606c8c21a3c6de8b18b5ddca4485 629 Hamap MF_00044 Aspartate--tRNA(Asp) ligase [aspS]. 17 589 35.354 T 22-04-2016 SRM_RS11210 7265606c8c21a3c6de8b18b5ddca4485 629 SUPERFAMILY SSF55681 450 609 4.79E-106 T 22-04-2016 SRM_RS11210 7265606c8c21a3c6de8b18b5ddca4485 629 SUPERFAMILY SSF55681 138 315 4.79E-106 T 22-04-2016 SRM_RS11210 7265606c8c21a3c6de8b18b5ddca4485 629 SUPERFAMILY SSF55261 312 441 1.55E-25 T 22-04-2016 IPR004115 GAD-like domain GO:0004812|GO:0005524|GO:0005737 SRM_RS11210 7265606c8c21a3c6de8b18b5ddca4485 629 SUPERFAMILY SSF50249 18 122 1.37E-30 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold SRM_RS11210 7265606c8c21a3c6de8b18b5ddca4485 629 Gene3D G3DSA:3.30.930.10 436 609 3.2E-110 T 22-04-2016 SRM_RS11210 7265606c8c21a3c6de8b18b5ddca4485 629 Gene3D G3DSA:3.30.930.10 155 299 3.2E-110 T 22-04-2016 SRM_RS11210 7265606c8c21a3c6de8b18b5ddca4485 629 Pfam PF02938 GAD domain 331 424 3.4E-7 T 22-04-2016 IPR029351 GAD domain SRM_RS11210 7265606c8c21a3c6de8b18b5ddca4485 629 PANTHER PTHR22594 1 320 2.9E-244 T 22-04-2016 IPR018150 Aminoacyl-tRNA synthetase, class II (D/K/N)-like GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 SRM_RS11210 7265606c8c21a3c6de8b18b5ddca4485 629 PANTHER PTHR22594 392 597 2.9E-244 T 22-04-2016 IPR018150 Aminoacyl-tRNA synthetase, class II (D/K/N)-like GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 SRM_RS10550 55c364a730dd778449da0ad02d6167de 297 SUPERFAMILY SSF51735 126 291 6.8E-50 T 22-04-2016 IPR016040 NAD(P)-binding domain SRM_RS10550 55c364a730dd778449da0ad02d6167de 297 Gene3D G3DSA:3.40.192.10 11 142 5.8E-47 T 22-04-2016 SRM_RS10550 55c364a730dd778449da0ad02d6167de 297 Gene3D G3DSA:3.40.50.720 143 275 3.4E-51 T 22-04-2016 IPR016040 NAD(P)-binding domain SRM_RS10550 55c364a730dd778449da0ad02d6167de 297 Pfam PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain 9 124 3.1E-38 T 22-04-2016 IPR020630 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain GO:0003824|GO:0004488|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|UniPathway: UPA00193 SRM_RS10550 55c364a730dd778449da0ad02d6167de 297 Hamap MF_01576 Bifunctional protein FolD [folD]. 7 294 37.963 T 22-04-2016 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0003824|GO:0004488|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|UniPathway: UPA00193 SRM_RS10550 55c364a730dd778449da0ad02d6167de 297 SUPERFAMILY SSF53223 8 125 8.06E-37 T 22-04-2016 SRM_RS10550 55c364a730dd778449da0ad02d6167de 297 ProSitePatterns PS00766 Tetrahydrofolate dehydrogenase/cyclohydrolase signature 1. 79 104 - T 22-04-2016 IPR020867 Tetrahydrofolate dehydrogenase/cyclohydrolase, conserved site GO:0003824|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|UniPathway: UPA00193 SRM_RS10550 55c364a730dd778449da0ad02d6167de 297 PANTHER PTHR10025 1 291 1.1E-155 T 22-04-2016 SRM_RS10550 55c364a730dd778449da0ad02d6167de 297 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 78 105 5.4E-78 T 22-04-2016 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0003824|GO:0004488|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|UniPathway: UPA00193 SRM_RS10550 55c364a730dd778449da0ad02d6167de 297 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 113 134 5.4E-78 T 22-04-2016 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0003824|GO:0004488|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|UniPathway: UPA00193 SRM_RS10550 55c364a730dd778449da0ad02d6167de 297 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 250 266 5.4E-78 T 22-04-2016 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0003824|GO:0004488|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|UniPathway: UPA00193 SRM_RS10550 55c364a730dd778449da0ad02d6167de 297 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 37 59 5.4E-78 T 22-04-2016 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0003824|GO:0004488|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|UniPathway: UPA00193 SRM_RS10550 55c364a730dd778449da0ad02d6167de 297 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 209 238 5.4E-78 T 22-04-2016 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0003824|GO:0004488|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|UniPathway: UPA00193 SRM_RS10550 55c364a730dd778449da0ad02d6167de 297 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 158 178 5.4E-78 T 22-04-2016 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0003824|GO:0004488|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|UniPathway: UPA00193 SRM_RS10550 55c364a730dd778449da0ad02d6167de 297 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 267 285 5.4E-78 T 22-04-2016 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0003824|GO:0004488|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|UniPathway: UPA00193 SRM_RS10550 55c364a730dd778449da0ad02d6167de 297 Pfam PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain 127 291 2.2E-66 T 22-04-2016 IPR020631 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain GO:0003824|GO:0004488|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|UniPathway: UPA00193 SRM_RS01830 69c7cd7ca6e6a73cbe3babf0a6f48d2c 420 Pfam PF07282 Putative transposase DNA-binding domain 294 359 1.3E-25 T 22-04-2016 IPR010095 Transposase IS605, OrfB, C-terminal SRM_RS01830 69c7cd7ca6e6a73cbe3babf0a6f48d2c 420 TIGRFAM TIGR01766 tspaseT_teng_C: transposase, IS605 OrfB family 241 321 4.6E-24 T 22-04-2016 IPR010095 Transposase IS605, OrfB, C-terminal SRM_RS01830 69c7cd7ca6e6a73cbe3babf0a6f48d2c 420 PANTHER PTHR30405:SF6 60 384 1.7E-79 T 22-04-2016 SRM_RS01830 69c7cd7ca6e6a73cbe3babf0a6f48d2c 420 PANTHER PTHR30405 60 384 1.7E-79 T 22-04-2016 SRM_RS01830 69c7cd7ca6e6a73cbe3babf0a6f48d2c 420 Pfam PF01385 Probable transposase 156 275 2.3E-21 T 22-04-2016 IPR001959 Probable transposase, IS891/IS1136/IS1341 SRM_RS06600 4a6c003daf8b6b280792e3a3eb92922d 328 SUPERFAMILY SSF47789 251 320 1.44E-25 T 22-04-2016 SRM_RS06600 4a6c003daf8b6b280792e3a3eb92922d 328 SUPERFAMILY SSF56553 51 173 5.06E-37 T 22-04-2016 IPR011262 DNA-directed RNA polymerase, insert domain GO:0003899|GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 SRM_RS06600 4a6c003daf8b6b280792e3a3eb92922d 328 Gene3D G3DSA:1.10.150.20 245 321 8.1E-32 T 22-04-2016 SRM_RS06600 4a6c003daf8b6b280792e3a3eb92922d 328 TIGRFAM TIGR02027 rpoA: DNA-directed RNA polymerase, alpha subunit 22 317 1.4E-114 T 22-04-2016 IPR011773 DNA-directed RNA polymerase, alpha subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 SRM_RS06600 4a6c003daf8b6b280792e3a3eb92922d 328 Pfam PF01000 RNA polymerase Rpb3/RpoA insert domain 58 154 7.9E-18 T 22-04-2016 IPR011262 DNA-directed RNA polymerase, insert domain GO:0003899|GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 SRM_RS06600 4a6c003daf8b6b280792e3a3eb92922d 328 ProDom PD001179 RNA POLYMERASE ALPHA DNA-DIRECTED SUBUNIT CHAIN NUCLEOTIDYLTRANSFERASE TRANSFERASE TRANSCRIPTION TRANSCRIPTASE 257 321 1.0E-16 T 22-04-2016 IPR011260 RNA polymerase, alpha subunit, C-terminal GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 SRM_RS06600 4a6c003daf8b6b280792e3a3eb92922d 328 PANTHER PTHR32108 7 328 5.1E-123 T 22-04-2016 SRM_RS06600 4a6c003daf8b6b280792e3a3eb92922d 328 Gene3D G3DSA:2.170.120.12 51 172 1.3E-41 T 22-04-2016 IPR011262 DNA-directed RNA polymerase, insert domain GO:0003899|GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 SRM_RS06600 4a6c003daf8b6b280792e3a3eb92922d 328 PANTHER PTHR32108:SF0 7 328 5.1E-123 T 22-04-2016 SRM_RS06600 4a6c003daf8b6b280792e3a3eb92922d 328 Gene3D G3DSA:3.30.1360.10 12 49 3.9E-33 T 22-04-2016 SRM_RS06600 4a6c003daf8b6b280792e3a3eb92922d 328 Gene3D G3DSA:3.30.1360.10 173 226 3.9E-33 T 22-04-2016 SRM_RS06600 4a6c003daf8b6b280792e3a3eb92922d 328 Pfam PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain 28 222 2.1E-22 T 22-04-2016 IPR009025 DNA-directed RNA polymerase, RBP11-like dimerisation domain GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 SRM_RS06600 4a6c003daf8b6b280792e3a3eb92922d 328 Pfam PF03118 Bacterial RNA polymerase, alpha chain C terminal domain 245 309 3.2E-26 T 22-04-2016 IPR011260 RNA polymerase, alpha subunit, C-terminal GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 SRM_RS06600 4a6c003daf8b6b280792e3a3eb92922d 328 SMART SM00662 21 229 4.8E-77 T 22-04-2016 IPR011263 DNA-directed RNA polymerase, RpoA/D/Rpb3-type GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 SRM_RS06600 4a6c003daf8b6b280792e3a3eb92922d 328 Hamap MF_00059 DNA-directed RNA polymerase subunit alpha [rpoA]. 1 317 36.902 T 22-04-2016 IPR011773 DNA-directed RNA polymerase, alpha subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 SRM_RS06600 4a6c003daf8b6b280792e3a3eb92922d 328 SUPERFAMILY SSF55257 12 51 2.75E-28 T 22-04-2016 IPR009025 DNA-directed RNA polymerase, RBP11-like dimerisation domain GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 SRM_RS06600 4a6c003daf8b6b280792e3a3eb92922d 328 SUPERFAMILY SSF55257 174 228 2.75E-28 T 22-04-2016 IPR009025 DNA-directed RNA polymerase, RBP11-like dimerisation domain GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 SRM_RS12170 5394b3d63b3d89e6a892b7cffd49b015 546 Pfam PF08502 LeuA allosteric (dimerisation) domain 376 523 4.7E-31 T 22-04-2016 IPR013709 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871|UniPathway: UPA00048 SRM_RS12170 5394b3d63b3d89e6a892b7cffd49b015 546 SMART SM00917 376 524 1.9E-32 T 22-04-2016 IPR013709 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871|UniPathway: UPA00048 SRM_RS12170 5394b3d63b3d89e6a892b7cffd49b015 546 SUPERFAMILY SSF110921 424 523 4.32E-21 T 22-04-2016 IPR013709 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871|UniPathway: UPA00048 SRM_RS12170 5394b3d63b3d89e6a892b7cffd49b015 546 TIGRFAM TIGR00973 leuA_bact: 2-isopropylmalate synthase 5 521 3.9E-192 T 22-04-2016 IPR005671 2-isopropylmalate synthase, bacterial-type GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871|UniPathway: UPA00048 SRM_RS12170 5394b3d63b3d89e6a892b7cffd49b015 546 Pfam PF00682 HMGL-like 5 280 6.2E-85 T 22-04-2016 IPR000891 Pyruvate carboxyltransferase GO:0003824 SRM_RS12170 5394b3d63b3d89e6a892b7cffd49b015 546 Hamap MF_01025 2-isopropylmalate synthase [leuA]. 2 533 40.611 T 22-04-2016 IPR005671 2-isopropylmalate synthase, bacterial-type GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871|UniPathway: UPA00048 SRM_RS12170 5394b3d63b3d89e6a892b7cffd49b015 546 Gene3D G3DSA:3.20.20.70 1 353 7.5E-135 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 SRM_RS12170 5394b3d63b3d89e6a892b7cffd49b015 546 ProSitePatterns PS00815 Alpha-isopropylmalate and homocitrate synthases signature 1. 12 28 - T 22-04-2016 IPR002034 Alpha-isopropylmalate/homocitrate synthase, conserved site GO:0019752|GO:0046912 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871|UniPathway: UPA00048 SRM_RS12170 5394b3d63b3d89e6a892b7cffd49b015 546 ProSitePatterns PS00816 Alpha-isopropylmalate and homocitrate synthases signature 2. 206 219 - T 22-04-2016 IPR002034 Alpha-isopropylmalate/homocitrate synthase, conserved site GO:0019752|GO:0046912 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871|UniPathway: UPA00048 SRM_RS12170 5394b3d63b3d89e6a892b7cffd49b015 546 SUPERFAMILY SSF51569 1 298 2.38E-89 T 22-04-2016 SRM_RS01010 7021eb8dec4f8a32c4cd4a111d77ce05 148 Gene3D G3DSA:3.30.230.10 14 139 8.3E-14 T 22-04-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup SRM_RS01010 7021eb8dec4f8a32c4cd4a111d77ce05 148 SUPERFAMILY SSF54211 17 140 1.14E-8 T 22-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold SRM_RS01010 7021eb8dec4f8a32c4cd4a111d77ce05 148 Pfam PF00825 Ribonuclease P 17 134 1.6E-7 T 22-04-2016 IPR000100 Ribonuclease P GO:0000049|GO:0004526|GO:0008033 SRM_RS01010 7021eb8dec4f8a32c4cd4a111d77ce05 148 Hamap MF_00227 Ribonuclease P protein component [rnpA]. 17 142 11.222 T 22-04-2016 IPR000100 Ribonuclease P GO:0000049|GO:0004526|GO:0008033 SRM_RS08215 25b2573c4dbc1ffec9a78489f62d3266 155 Gene3D G3DSA:3.40.630.30 2 144 1.6E-35 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase SRM_RS08215 25b2573c4dbc1ffec9a78489f62d3266 155 Pfam PF00583 Acetyltransferase (GNAT) family 58 135 2.6E-16 T 22-04-2016 IPR000182 GNAT domain GO:0008080 SRM_RS08215 25b2573c4dbc1ffec9a78489f62d3266 155 SUPERFAMILY SSF55729 1 155 2.66E-32 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase SRM_RS08215 25b2573c4dbc1ffec9a78489f62d3266 155 PANTHER PTHR10545:SF38 7 136 4.8E-40 T 22-04-2016 SRM_RS08215 25b2573c4dbc1ffec9a78489f62d3266 155 PANTHER PTHR10545 7 136 4.8E-40 T 22-04-2016 SRM_RS13490 1600018c603c77848a14029178bad67d 455 SUPERFAMILY SSF52540 204 388 1.57E-40 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SRM_RS13490 1600018c603c77848a14029178bad67d 455 PANTHER PTHR10229 1 398 1.5E-160 T 22-04-2016 IPR016496 GTPase HflX GO:0005525 SRM_RS13490 1600018c603c77848a14029178bad67d 455 Gene3D G3DSA:3.40.50.300 205 365 1.8E-36 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SRM_RS13490 1600018c603c77848a14029178bad67d 455 TIGRFAM TIGR03156 GTP_HflX: GTP-binding protein HflX 14 360 8.1E-139 T 22-04-2016 IPR016496 GTPase HflX GO:0005525 SRM_RS13490 1600018c603c77848a14029178bad67d 455 Pfam PF13167 GTP-binding GTPase N-terminal 31 118 6.5E-33 T 22-04-2016 IPR025121 GTPase HflX, N-terminal SRM_RS13490 1600018c603c77848a14029178bad67d 455 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 271 289 5.3E-8 T 22-04-2016 IPR006073 GTP binding domain GO:0005525 SRM_RS13490 1600018c603c77848a14029178bad67d 455 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 204 224 5.3E-8 T 22-04-2016 IPR006073 GTP binding domain GO:0005525 SRM_RS13490 1600018c603c77848a14029178bad67d 455 PIRSF PIRSF006809 5 421 3.3E-147 T 22-04-2016 IPR016496 GTPase HflX GO:0005525 SRM_RS13490 1600018c603c77848a14029178bad67d 455 Pfam PF01926 50S ribosome-binding GTPase 205 322 4.2E-21 T 22-04-2016 IPR006073 GTP binding domain GO:0005525 SRM_RS13490 1600018c603c77848a14029178bad67d 455 Hamap MF_00900 GTPase HflX [hflX]. 33 393 49.0 T 22-04-2016 IPR016496 GTPase HflX GO:0005525 SRM_RS13490 1600018c603c77848a14029178bad67d 455 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 206 327 2.9E-12 T 22-04-2016 IPR005225 Small GTP-binding protein domain GO:0005525 SRM_RS13490 1600018c603c77848a14029178bad67d 455 PANTHER PTHR10229:SF0 1 398 1.5E-160 T 22-04-2016 SRM_RS13490 1600018c603c77848a14029178bad67d 455 Pfam PF16360 GTP-binding GTPase Middle Region 120 198 2.8E-30 T 22-04-2016 IPR032305 GTP-binding protein, middle domain SRM_RS11805 6e2787b2df8370c0b153c563f690c096 204 PIRSF PIRSF004553 1 177 6.4E-40 T 22-04-2016 IPR004398 RNA methyltransferase, RsmD GO:0008168|GO:0031167 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 SRM_RS11805 6e2787b2df8370c0b153c563f690c096 204 SUPERFAMILY SSF53335 1 175 1.17E-41 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SRM_RS11805 6e2787b2df8370c0b153c563f690c096 204 Pfam PF03602 Conserved hypothetical protein 95 1 175 1.6E-40 T 22-04-2016 SRM_RS11805 6e2787b2df8370c0b153c563f690c096 204 Gene3D G3DSA:3.40.50.150 1 177 9.0E-51 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SRM_RS11805 6e2787b2df8370c0b153c563f690c096 204 PANTHER PTHR18895 18 176 2.6E-31 T 22-04-2016 SRM_RS11805 6e2787b2df8370c0b153c563f690c096 204 PANTHER PTHR18895:SF60 18 176 2.6E-31 T 22-04-2016 SRM_RS07825 12eecea714f5041b4e9019a9642f2b5b 349 SUPERFAMILY SSF52402 190 331 7.28E-35 T 22-04-2016 SRM_RS07825 12eecea714f5041b4e9019a9642f2b5b 349 Gene3D G3DSA:3.40.50.620 30 175 2.7E-29 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold SRM_RS07825 12eecea714f5041b4e9019a9642f2b5b 349 PANTHER PTHR31964 174 331 5.8E-28 T 22-04-2016 SRM_RS07825 12eecea714f5041b4e9019a9642f2b5b 349 SUPERFAMILY SSF52402 35 178 4.35E-28 T 22-04-2016 SRM_RS07825 12eecea714f5041b4e9019a9642f2b5b 349 PRINTS PR01438 Universal stress protein signature 189 207 9.0E-17 T 22-04-2016 IPR006015 Universal stress protein A SRM_RS07825 12eecea714f5041b4e9019a9642f2b5b 349 PRINTS PR01438 Universal stress protein signature 308 330 9.0E-17 T 22-04-2016 IPR006015 Universal stress protein A SRM_RS07825 12eecea714f5041b4e9019a9642f2b5b 349 PRINTS PR01438 Universal stress protein signature 290 302 9.0E-17 T 22-04-2016 IPR006015 Universal stress protein A SRM_RS07825 12eecea714f5041b4e9019a9642f2b5b 349 Pfam PF00582 Universal stress protein family 190 328 3.8E-29 T 22-04-2016 IPR006016 UspA GO:0006950 SRM_RS07825 12eecea714f5041b4e9019a9642f2b5b 349 Pfam PF00582 Universal stress protein family 37 175 2.0E-26 T 22-04-2016 IPR006016 UspA GO:0006950 SRM_RS07825 12eecea714f5041b4e9019a9642f2b5b 349 Gene3D G3DSA:3.40.50.620 190 331 1.9E-35 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold SRM_RS15530 85c990d5f73aa04da71eba792c01c888 574 Pfam PF01979 Amidohydrolase family 76 452 5.3E-28 T 22-04-2016 IPR006680 Amidohydrolase-related GO:0016787 SRM_RS15530 85c990d5f73aa04da71eba792c01c888 574 Gene3D G3DSA:3.20.20.140 345 401 4.2E-58 T 22-04-2016 SRM_RS15530 85c990d5f73aa04da71eba792c01c888 574 Gene3D G3DSA:3.20.20.140 82 311 4.2E-58 T 22-04-2016 SRM_RS15530 85c990d5f73aa04da71eba792c01c888 574 PANTHER PTHR11271 34 316 2.3E-37 T 22-04-2016 SRM_RS15530 85c990d5f73aa04da71eba792c01c888 574 PANTHER PTHR11271 348 480 2.3E-37 T 22-04-2016 SRM_RS15530 85c990d5f73aa04da71eba792c01c888 574 SUPERFAMILY SSF51556 347 415 6.81E-53 T 22-04-2016 IPR032466 Metal-dependent hydrolase SRM_RS15530 85c990d5f73aa04da71eba792c01c888 574 SUPERFAMILY SSF51556 79 296 6.81E-53 T 22-04-2016 IPR032466 Metal-dependent hydrolase SRM_RS15530 85c990d5f73aa04da71eba792c01c888 574 SUPERFAMILY SSF51338 417 456 9.02E-14 T 22-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 SRM_RS15530 85c990d5f73aa04da71eba792c01c888 574 SUPERFAMILY SSF51338 31 80 9.02E-14 T 22-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 SRM_RS15530 85c990d5f73aa04da71eba792c01c888 574 Gene3D G3DSA:3.10.450.50 462 569 2.9E-12 T 22-04-2016 IPR032710 NTF2-like domain SRM_RS15530 85c990d5f73aa04da71eba792c01c888 574 Pfam PF12680 SnoaL-like domain 471 565 9.0E-10 T 22-04-2016 IPR009959 Polyketide cyclase SnoaL-like domain SRM_RS15530 85c990d5f73aa04da71eba792c01c888 574 SUPERFAMILY SSF54427 462 571 1.32E-19 T 22-04-2016 IPR032710 NTF2-like domain SRM_RS15530 85c990d5f73aa04da71eba792c01c888 574 PANTHER PTHR11271:SF33 34 316 2.3E-37 T 22-04-2016 SRM_RS15530 85c990d5f73aa04da71eba792c01c888 574 PANTHER PTHR11271:SF33 348 480 2.3E-37 T 22-04-2016 SRM_RS15530 85c990d5f73aa04da71eba792c01c888 574 Gene3D G3DSA:2.30.40.10 431 457 1.4E-23 T 22-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 SRM_RS15530 85c990d5f73aa04da71eba792c01c888 574 Gene3D G3DSA:2.30.40.10 22 81 1.4E-23 T 22-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 SRM_RS15530 85c990d5f73aa04da71eba792c01c888 574 Gene3D G3DSA:2.30.40.10 402 430 5.2E-7 T 22-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 SRM_RS14755 e905f06769001bbf3482e115fd0816a2 766 SUPERFAMILY SSF48452 61 141 2.4E-6 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 SRM_RS14755 e905f06769001bbf3482e115fd0816a2 766 TIGRFAM TIGR04514 GWxTD_dom: GWxTD domain 212 311 5.6E-7 T 22-04-2016 IPR030959 GWxTD domain SRM_RS14755 e905f06769001bbf3482e115fd0816a2 766 Gene3D G3DSA:1.25.40.10 58 140 4.2E-6 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 SRM_RS14755 e905f06769001bbf3482e115fd0816a2 766 Pfam PF14559 Tetratricopeptide repeat 66 116 6.8E-6 T 22-04-2016 SRM_RS03120 9eab66d4fc99a8933d6b8019fa5104b0 366 Pfam PF03372 Endonuclease/Exonuclease/phosphatase family 106 351 1.5E-14 T 22-04-2016 IPR005135 Endonuclease/exonuclease/phosphatase SRM_RS03120 9eab66d4fc99a8933d6b8019fa5104b0 366 SUPERFAMILY SSF56219 99 167 3.66E-26 T 22-04-2016 IPR005135 Endonuclease/exonuclease/phosphatase SRM_RS03120 9eab66d4fc99a8933d6b8019fa5104b0 366 SUPERFAMILY SSF56219 206 360 3.66E-26 T 22-04-2016 IPR005135 Endonuclease/exonuclease/phosphatase SRM_RS03120 9eab66d4fc99a8933d6b8019fa5104b0 366 Gene3D G3DSA:3.60.10.10 101 300 5.1E-10 T 22-04-2016 IPR005135 Endonuclease/exonuclease/phosphatase SRM_RS03515 036ef75775702cec1480a4b2176c84c3 235 Gene3D G3DSA:3.40.50.880 3 230 5.3E-37 T 22-04-2016 IPR029062 Class I glutamine amidotransferase-like SRM_RS03515 036ef75775702cec1480a4b2176c84c3 235 PANTHER PTHR10099 4 229 1.6E-119 T 22-04-2016 SRM_RS03515 036ef75775702cec1480a4b2176c84c3 235 Pfam PF13507 CobB/CobQ-like glutamine amidotransferase domain 6 212 3.8E-48 T 22-04-2016 SRM_RS03515 036ef75775702cec1480a4b2176c84c3 235 PIRSF PIRSF001586 1 233 1.8E-87 T 22-04-2016 IPR010075 Phosphoribosylformylglycinamidine synthase subunit PurQ GO:0004642|GO:0005737|GO:0006189 KEGG: 00220+3.5.1.2|KEGG: 00230+6.3.5.3|KEGG: 00250+3.5.1.2|KEGG: 00471+3.5.1.2|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|UniPathway: UPA00074 SRM_RS03515 036ef75775702cec1480a4b2176c84c3 235 TIGRFAM TIGR01737 FGAM_synth_I: phosphoribosylformylglycinamidine synthase I 4 229 5.9E-95 T 22-04-2016 IPR010075 Phosphoribosylformylglycinamidine synthase subunit PurQ GO:0004642|GO:0005737|GO:0006189 KEGG: 00220+3.5.1.2|KEGG: 00230+6.3.5.3|KEGG: 00250+3.5.1.2|KEGG: 00471+3.5.1.2|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|UniPathway: UPA00074 SRM_RS03515 036ef75775702cec1480a4b2176c84c3 235 Hamap MF_00421 Phosphoribosylformylglycinamidine synthase subunit PurQ [purQ]. 3 228 45.829 T 22-04-2016 IPR010075 Phosphoribosylformylglycinamidine synthase subunit PurQ GO:0004642|GO:0005737|GO:0006189 KEGG: 00220+3.5.1.2|KEGG: 00230+6.3.5.3|KEGG: 00250+3.5.1.2|KEGG: 00471+3.5.1.2|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|UniPathway: UPA00074 SRM_RS03515 036ef75775702cec1480a4b2176c84c3 235 SUPERFAMILY SSF52317 3 229 1.39E-76 T 22-04-2016 IPR029062 Class I glutamine amidotransferase-like SRM_RS03515 036ef75775702cec1480a4b2176c84c3 235 SMART SM01211 2 230 1.1E-137 T 22-04-2016 SRM_RS10930 f48cafdd624c1e46d3474b010bf973c7 447 SUPERFAMILY SSF51556 92 392 2.21E-15 T 22-04-2016 IPR032466 Metal-dependent hydrolase SRM_RS10930 f48cafdd624c1e46d3474b010bf973c7 447 Pfam PF01979 Amidohydrolase family 89 412 7.3E-11 T 22-04-2016 IPR006680 Amidohydrolase-related GO:0016787 SRM_RS10930 f48cafdd624c1e46d3474b010bf973c7 447 Gene3D G3DSA:2.30.40.10 30 149 2.7E-23 T 22-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 SRM_RS10930 f48cafdd624c1e46d3474b010bf973c7 447 SUPERFAMILY SSF51338 40 93 2.5E-15 T 22-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 SRM_RS10930 f48cafdd624c1e46d3474b010bf973c7 447 SUPERFAMILY SSF51338 391 424 2.5E-15 T 22-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 SRM_RS10930 f48cafdd624c1e46d3474b010bf973c7 447 Gene3D G3DSA:2.30.40.10 333 417 8.4E-17 T 22-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 SRM_RS03170 37501789e6cf4e693e0cd6264ae9d698 378 Gene3D G3DSA:2.70.70.10 243 342 9.0E-18 T 22-04-2016 SRM_RS03170 37501789e6cf4e693e0cd6264ae9d698 378 Pfam PF01551 Peptidase family M23 252 341 9.9E-13 T 22-04-2016 IPR016047 Peptidase M23 SRM_RS03170 37501789e6cf4e693e0cd6264ae9d698 378 SUPERFAMILY SSF51261 248 337 5.75E-14 T 22-04-2016 IPR011055 Duplicated hybrid motif SRM_RS13300 24d2b29f2c109f0137f1ec3504dff1c2 446 Gene3D G3DSA:3.40.50.1100 109 200 1.7E-13 T 22-04-2016 SRM_RS13300 24d2b29f2c109f0137f1ec3504dff1c2 446 TIGRFAM TIGR00260 thrC: threonine synthase 83 407 1.7E-74 T 22-04-2016 IPR004450 Threonine synthase-like SRM_RS13300 24d2b29f2c109f0137f1ec3504dff1c2 446 Pfam PF14821 Threonine synthase N terminus 7 80 2.4E-12 T 22-04-2016 IPR029144 Threonine synthase, N-terminal SRM_RS13300 24d2b29f2c109f0137f1ec3504dff1c2 446 PANTHER PTHR10314 30 440 2.2E-108 T 22-04-2016 SRM_RS13300 24d2b29f2c109f0137f1ec3504dff1c2 446 ProSitePatterns PS00165 Serine/threonine dehydratases pyridoxal-phosphate attachment site. 100 114 - T 22-04-2016 IPR000634 Serine/threonine dehydratase, pyridoxal-phosphate-binding site GO:0006520|GO:0030170 SRM_RS13300 24d2b29f2c109f0137f1ec3504dff1c2 446 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 100 370 6.4E-21 T 22-04-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme SRM_RS13300 24d2b29f2c109f0137f1ec3504dff1c2 446 SUPERFAMILY SSF53686 6 435 3.57E-114 T 22-04-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme SRM_RS13300 24d2b29f2c109f0137f1ec3504dff1c2 446 PANTHER PTHR10314:SF1 30 440 2.2E-108 T 22-04-2016 SRM_RS13300 24d2b29f2c109f0137f1ec3504dff1c2 446 Gene3D G3DSA:3.90.1380.10 6 87 4.2E-15 T 22-04-2016 IPR029144 Threonine synthase, N-terminal SRM_RS13300 24d2b29f2c109f0137f1ec3504dff1c2 446 Gene3D G3DSA:3.40.50.1100 201 411 1.3E-62 T 22-04-2016 SRM_RS13115 79f9a0bf3adb4cff8e599411e78a87c8 373 Gene3D G3DSA:3.40.50.300 112 368 6.1E-79 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SRM_RS13115 79f9a0bf3adb4cff8e599411e78a87c8 373 Gene3D G3DSA:2.40.50.140 13 66 7.9E-8 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold SRM_RS13115 79f9a0bf3adb4cff8e599411e78a87c8 373 PANTHER PTHR15184:SF34 73 354 2.0E-128 T 22-04-2016 SRM_RS13115 79f9a0bf3adb4cff8e599411e78a87c8 373 PANTHER PTHR15184 73 354 2.0E-128 T 22-04-2016 SRM_RS13115 79f9a0bf3adb4cff8e599411e78a87c8 373 SMART SM00382 124 309 7.8E-7 T 22-04-2016 IPR003593 AAA+ ATPase domain SRM_RS13115 79f9a0bf3adb4cff8e599411e78a87c8 373 Pfam PF07497 Rho termination factor, RNA-binding domain 16 81 8.0E-5 T 22-04-2016 IPR011113 Rho termination factor, RNA-binding GO:0003723|GO:0006353 SRM_RS13115 79f9a0bf3adb4cff8e599411e78a87c8 373 SUPERFAMILY SSF52540 105 324 4.32E-53 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SRM_RS13115 79f9a0bf3adb4cff8e599411e78a87c8 373 Hamap MF_01884 Transcription termination factor Rho [rho]. 1 373 137.439 T 22-04-2016 IPR004665 Transcription termination factor Rho GO:0003723|GO:0005524|GO:0006353|GO:0008186 SRM_RS13115 79f9a0bf3adb4cff8e599411e78a87c8 373 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 113 317 2.2E-16 T 22-04-2016 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 SRM_RS04130 07cbf5096c489ba5b28122d66986a15d 235 Gene3D G3DSA:1.10.10.10 2 40 8.5E-5 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SRM_RS04130 07cbf5096c489ba5b28122d66986a15d 235 PANTHER PTHR35004 1 47 6.7E-16 T 22-04-2016 SRM_RS04130 07cbf5096c489ba5b28122d66986a15d 235 PANTHER PTHR35004 63 211 6.7E-16 T 22-04-2016 SRM_RS04130 07cbf5096c489ba5b28122d66986a15d 235 PANTHER PTHR35004:SF2 1 47 6.7E-16 T 22-04-2016 SRM_RS04130 07cbf5096c489ba5b28122d66986a15d 235 PANTHER PTHR35004:SF2 63 211 6.7E-16 T 22-04-2016 SRM_RS04130 07cbf5096c489ba5b28122d66986a15d 235 Pfam PF02796 Helix-turn-helix domain of resolvase 3 36 2.8E-5 T 22-04-2016 IPR006120 Resolvase, HTH domain GO:0000150|GO:0003677|GO:0006310 SRM_RS11525 994fdf43d4269dbe29d8cc4d0e3d8e03 592 Pfam PF16656 Purple acid Phosphatase, N-terminal domain 59 160 8.5E-18 T 22-04-2016 IPR015914 Purple acid phosphatase, N-terminal GO:0003993|GO:0046872 SRM_RS11525 994fdf43d4269dbe29d8cc4d0e3d8e03 592 PANTHER PTHR22953 346 497 1.1E-47 T 22-04-2016 SRM_RS11525 994fdf43d4269dbe29d8cc4d0e3d8e03 592 PANTHER PTHR22953 55 247 1.1E-47 T 22-04-2016 SRM_RS11525 994fdf43d4269dbe29d8cc4d0e3d8e03 592 SUPERFAMILY SSF56300 367 561 3.8E-54 T 22-04-2016 IPR029052 Metallo-dependent phosphatase-like SRM_RS11525 994fdf43d4269dbe29d8cc4d0e3d8e03 592 SUPERFAMILY SSF56300 167 265 3.8E-54 T 22-04-2016 IPR029052 Metallo-dependent phosphatase-like SRM_RS11525 994fdf43d4269dbe29d8cc4d0e3d8e03 592 PANTHER PTHR22953:SF0 346 497 1.1E-47 T 22-04-2016 SRM_RS11525 994fdf43d4269dbe29d8cc4d0e3d8e03 592 PANTHER PTHR22953:SF0 55 247 1.1E-47 T 22-04-2016 SRM_RS11525 994fdf43d4269dbe29d8cc4d0e3d8e03 592 Gene3D G3DSA:3.60.21.10 364 565 2.3E-70 T 22-04-2016 IPR029052 Metallo-dependent phosphatase-like SRM_RS11525 994fdf43d4269dbe29d8cc4d0e3d8e03 592 Gene3D G3DSA:3.60.21.10 164 256 2.3E-70 T 22-04-2016 IPR029052 Metallo-dependent phosphatase-like SRM_RS11525 994fdf43d4269dbe29d8cc4d0e3d8e03 592 Pfam PF00149 Calcineurin-like phosphoesterase 187 474 9.0E-15 T 22-04-2016 IPR004843 Calcineurin-like phosphoesterase domain, apaH type GO:0016787 SRM_RS11525 994fdf43d4269dbe29d8cc4d0e3d8e03 592 SUPERFAMILY SSF49363 49 161 2.49E-16 T 22-04-2016 IPR008963 Purple acid phosphatase-like, N-terminal GO:0003993|GO:0046872 SRM_RS11525 994fdf43d4269dbe29d8cc4d0e3d8e03 592 Gene3D G3DSA:2.60.40.380 59 162 4.0E-10 T 22-04-2016 IPR015914 Purple acid phosphatase, N-terminal GO:0003993|GO:0046872 SRM_RS07250 4c4b447ce37bab789afdc93253a261b9 213 SMART SM00464 6 184 1.7E-15 T 22-04-2016 IPR003111 ATP-dependent protease La (LON), substrate-binding domain GO:0004176|GO:0006508 SRM_RS07250 4c4b447ce37bab789afdc93253a261b9 213 Pfam PF02190 ATP-dependent protease La (LON) substrate-binding domain 7 179 9.9E-22 T 22-04-2016 IPR003111 ATP-dependent protease La (LON), substrate-binding domain GO:0004176|GO:0006508 SRM_RS07250 4c4b447ce37bab789afdc93253a261b9 213 SUPERFAMILY SSF88697 7 183 1.81E-35 T 22-04-2016 IPR015947 PUA-like domain SRM_RS14535 5f75ac6f7e8dda3e9d9af2a7fb2670ea 106 Hamap MF_00724 Flagellar hook-basal body complex protein FliE [fliE]. 4 106 15.258 T 22-04-2016 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 SRM_RS14535 5f75ac6f7e8dda3e9d9af2a7fb2670ea 106 PANTHER PTHR34653 11 106 8.8E-15 T 22-04-2016 SRM_RS14535 5f75ac6f7e8dda3e9d9af2a7fb2670ea 106 PRINTS PR01006 Flagellar hook-basal body complex protein FliE signature 70 86 7.6E-11 T 22-04-2016 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 SRM_RS14535 5f75ac6f7e8dda3e9d9af2a7fb2670ea 106 PRINTS PR01006 Flagellar hook-basal body complex protein FliE signature 36 52 7.6E-11 T 22-04-2016 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 SRM_RS14535 5f75ac6f7e8dda3e9d9af2a7fb2670ea 106 PRINTS PR01006 Flagellar hook-basal body complex protein FliE signature 91 104 7.6E-11 T 22-04-2016 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 SRM_RS14535 5f75ac6f7e8dda3e9d9af2a7fb2670ea 106 TIGRFAM TIGR00205 fliE: flagellar hook-basal body complex protein FliE 27 106 1.9E-19 T 22-04-2016 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 SRM_RS14535 5f75ac6f7e8dda3e9d9af2a7fb2670ea 106 Pfam PF02049 Flagellar hook-basal body complex protein FliE 30 106 3.3E-23 T 22-04-2016 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 SRM_RS04475 e507ffc1bc27732f2b27ef7c998f1c9e 1368 Gene3D G3DSA:3.30.565.10 1213 1363 5.8E-39 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SRM_RS04475 e507ffc1bc27732f2b27ef7c998f1c9e 1368 SUPERFAMILY SSF47384 1112 1209 6.08E-9 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SRM_RS04475 e507ffc1bc27732f2b27ef7c998f1c9e 1368 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 1253 1363 3.2E-21 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SRM_RS04475 e507ffc1bc27732f2b27ef7c998f1c9e 1368 Pfam PF00672 HAMP domain 1054 1121 1.5E-14 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 SRM_RS04475 e507ffc1bc27732f2b27ef7c998f1c9e 1368 SMART SM00388 1135 1211 4.6E-6 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SRM_RS04475 e507ffc1bc27732f2b27ef7c998f1c9e 1368 PANTHER PTHR24423 1 15 1.8E-56 T 22-04-2016 SRM_RS04475 e507ffc1bc27732f2b27ef7c998f1c9e 1368 PANTHER PTHR24423 1067 1367 1.8E-56 T 22-04-2016 SRM_RS04475 e507ffc1bc27732f2b27ef7c998f1c9e 1368 Pfam PF00512 His Kinase A (phospho-acceptor) domain 1136 1208 2.3E-6 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SRM_RS04475 e507ffc1bc27732f2b27ef7c998f1c9e 1368 SMART SM00387 1252 1365 2.2E-31 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SRM_RS04475 e507ffc1bc27732f2b27ef7c998f1c9e 1368 Gene3D G3DSA:1.10.287.130 1129 1207 2.3E-7 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SRM_RS04475 e507ffc1bc27732f2b27ef7c998f1c9e 1368 PRINTS PR00344 Bacterial sensor protein C-terminal signature 1325 1343 1.4E-15 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SRM_RS04475 e507ffc1bc27732f2b27ef7c998f1c9e 1368 PRINTS PR00344 Bacterial sensor protein C-terminal signature 1349 1362 1.4E-15 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SRM_RS04475 e507ffc1bc27732f2b27ef7c998f1c9e 1368 PRINTS PR00344 Bacterial sensor protein C-terminal signature 1296 1310 1.4E-15 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SRM_RS04475 e507ffc1bc27732f2b27ef7c998f1c9e 1368 PRINTS PR00344 Bacterial sensor protein C-terminal signature 1314 1324 1.4E-15 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SRM_RS04475 e507ffc1bc27732f2b27ef7c998f1c9e 1368 SMART SM00304 1073 1125 2.4E-13 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 SRM_RS04475 e507ffc1bc27732f2b27ef7c998f1c9e 1368 SUPERFAMILY SSF158472 1075 1122 1.96E-8 T 22-04-2016 SRM_RS04475 e507ffc1bc27732f2b27ef7c998f1c9e 1368 SUPERFAMILY SSF55874 1210 1363 1.24E-36 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SRM_RS11460 a4df4c950d18a732d32acbb59fa2c62a 160 SUPERFAMILY SSF53098 24 147 7.78E-10 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 SRM_RS11460 a4df4c950d18a732d32acbb59fa2c62a 160 Gene3D G3DSA:3.30.420.10 24 145 6.8E-6 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 SRM_RS11460 a4df4c950d18a732d32acbb59fa2c62a 160 Pfam PF13358 DDE superfamily endonuclease 8 126 3.3E-24 T 22-04-2016 SRM_RS05025 a4df4c950d18a732d32acbb59fa2c62a 160 SUPERFAMILY SSF53098 24 147 7.78E-10 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 SRM_RS05025 a4df4c950d18a732d32acbb59fa2c62a 160 Gene3D G3DSA:3.30.420.10 24 145 6.8E-6 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 SRM_RS05025 a4df4c950d18a732d32acbb59fa2c62a 160 Pfam PF13358 DDE superfamily endonuclease 8 126 3.3E-24 T 22-04-2016 SRM_RS15525 eb0054ccc7f0884b07220ed3ad03c18c 389 Pfam PF02638 Glycosyl hydrolase-like 10 67 248 9.9E-9 T 22-04-2016 IPR003790 Glycosyl hydrolase-like 10 SRM_RS09215 a6246ffa4597d1dea0af5173d99f9dc8 189 SUPERFAMILY SSF49503 67 189 2.12E-31 T 22-04-2016 IPR008972 Cupredoxin SRM_RS09215 a6246ffa4597d1dea0af5173d99f9dc8 189 ProSitePatterns PS00196 Type-1 copper (blue) proteins signature. 167 183 - T 22-04-2016 IPR028871 Blue (type 1) copper protein, binding site SRM_RS09215 a6246ffa4597d1dea0af5173d99f9dc8 189 Gene3D G3DSA:2.60.40.420 66 189 2.7E-36 T 22-04-2016 IPR008972 Cupredoxin SRM_RS09215 a6246ffa4597d1dea0af5173d99f9dc8 189 PANTHER PTHR38439 51 189 1.9E-29 T 22-04-2016 SRM_RS09215 a6246ffa4597d1dea0af5173d99f9dc8 189 ProDom PD003655 COPPER ELECTRON AZURIN METAL-BINDING PERIPLASMIC PRECURSOR SIGNAL SEQUENCING DIRECT MEMBRANE 74 185 5.0E-15 T 22-04-2016 SRM_RS09215 a6246ffa4597d1dea0af5173d99f9dc8 189 Pfam PF00127 Copper binding proteins, plastocyanin/azurin family 68 188 6.5E-15 T 22-04-2016 IPR000923 Blue (type 1) copper domain GO:0005507|GO:0009055 SRM_RS09215 a6246ffa4597d1dea0af5173d99f9dc8 189 PANTHER PTHR38439:SF2 51 189 1.9E-29 T 22-04-2016 SRM_RS13455 50b66129847e5de35e80143d6f4f55a7 715 Gene3D G3DSA:1.10.520.10 408 565 1.7E-64 T 22-04-2016 SRM_RS13455 50b66129847e5de35e80143d6f4f55a7 715 Gene3D G3DSA:1.10.520.10 693 714 1.7E-64 T 22-04-2016 SRM_RS13455 50b66129847e5de35e80143d6f4f55a7 715 Gene3D G3DSA:1.10.520.10 201 224 1.9E-69 T 22-04-2016 SRM_RS13455 50b66129847e5de35e80143d6f4f55a7 715 Gene3D G3DSA:1.10.520.10 29 169 1.9E-69 T 22-04-2016 SRM_RS13455 50b66129847e5de35e80143d6f4f55a7 715 PANTHER PTHR30555 3 715 0.0 T 22-04-2016 SRM_RS13455 50b66129847e5de35e80143d6f4f55a7 715 ProSitePatterns PS00436 Peroxidases active site signature. 69 80 - T 22-04-2016 IPR019794 Peroxidase, active site GO:0004601|GO:0055114 SRM_RS13455 50b66129847e5de35e80143d6f4f55a7 715 PANTHER PTHR30555:SF0 3 715 0.0 T 22-04-2016 SRM_RS13455 50b66129847e5de35e80143d6f4f55a7 715 TIGRFAM TIGR00198 cat_per_HPI: catalase/peroxidase HPI 4 714 0.0 T 22-04-2016 IPR000763 Catalase-peroxidase haem GO:0004096|GO:0004601|GO:0006979|GO:0020037|GO:0055114 KEGG: 00360+1.11.1.21|KEGG: 00380+1.11.1.21|KEGG: 00940+1.11.1.21|MetaCyc: PWY-5506 SRM_RS13455 50b66129847e5de35e80143d6f4f55a7 715 Pfam PF00141 Peroxidase 379 687 8.8E-39 T 22-04-2016 IPR002016 Haem peroxidase, plant/fungal/bacterial GO:0004601|GO:0006979|GO:0020037|GO:0055114 SRM_RS13455 50b66129847e5de35e80143d6f4f55a7 715 Pfam PF00141 Peroxidase 58 371 1.4E-49 T 22-04-2016 IPR002016 Haem peroxidase, plant/fungal/bacterial GO:0004601|GO:0006979|GO:0020037|GO:0055114 SRM_RS13455 50b66129847e5de35e80143d6f4f55a7 715 PRINTS PR00458 Haem peroxidase superfamily signature 233 248 2.5E-18 T 22-04-2016 IPR002016 Haem peroxidase, plant/fungal/bacterial GO:0004601|GO:0006979|GO:0020037|GO:0055114 SRM_RS13455 50b66129847e5de35e80143d6f4f55a7 715 PRINTS PR00458 Haem peroxidase superfamily signature 620 635 2.5E-18 T 22-04-2016 IPR002016 Haem peroxidase, plant/fungal/bacterial GO:0004601|GO:0006979|GO:0020037|GO:0055114 SRM_RS13455 50b66129847e5de35e80143d6f4f55a7 715 PRINTS PR00458 Haem peroxidase superfamily signature 147 159 2.5E-18 T 22-04-2016 IPR002016 Haem peroxidase, plant/fungal/bacterial GO:0004601|GO:0006979|GO:0020037|GO:0055114 SRM_RS13455 50b66129847e5de35e80143d6f4f55a7 715 PRINTS PR00458 Haem peroxidase superfamily signature 129 146 2.5E-18 T 22-04-2016 IPR002016 Haem peroxidase, plant/fungal/bacterial GO:0004601|GO:0006979|GO:0020037|GO:0055114 SRM_RS13455 50b66129847e5de35e80143d6f4f55a7 715 PRINTS PR00458 Haem peroxidase superfamily signature 69 83 2.5E-18 T 22-04-2016 IPR002016 Haem peroxidase, plant/fungal/bacterial GO:0004601|GO:0006979|GO:0020037|GO:0055114 SRM_RS13455 50b66129847e5de35e80143d6f4f55a7 715 Hamap MF_01961 Catalase-peroxidase [katG]. 1 715 39.73 T 22-04-2016 IPR000763 Catalase-peroxidase haem GO:0004096|GO:0004601|GO:0006979|GO:0020037|GO:0055114 KEGG: 00360+1.11.1.21|KEGG: 00380+1.11.1.21|KEGG: 00940+1.11.1.21|MetaCyc: PWY-5506 SRM_RS13455 50b66129847e5de35e80143d6f4f55a7 715 ProSitePatterns PS00435 Peroxidases proximal heme-ligand signature. 233 243 - T 22-04-2016 IPR019793 Peroxidases heam-ligand binding site SRM_RS13455 50b66129847e5de35e80143d6f4f55a7 715 SUPERFAMILY SSF48113 406 714 2.95E-105 T 22-04-2016 IPR010255 Haem peroxidase GO:0004601|GO:0006979|GO:0020037|GO:0055114 SRM_RS13455 50b66129847e5de35e80143d6f4f55a7 715 PRINTS PR00460 Bacterial haem catalase-peroxidase signature 456 482 3.5E-47 T 22-04-2016 IPR000763 Catalase-peroxidase haem GO:0004096|GO:0004601|GO:0006979|GO:0020037|GO:0055114 KEGG: 00360+1.11.1.21|KEGG: 00380+1.11.1.21|KEGG: 00940+1.11.1.21|MetaCyc: PWY-5506 SRM_RS13455 50b66129847e5de35e80143d6f4f55a7 715 PRINTS PR00460 Bacterial haem catalase-peroxidase signature 241 264 3.5E-47 T 22-04-2016 IPR000763 Catalase-peroxidase haem GO:0004096|GO:0004601|GO:0006979|GO:0020037|GO:0055114 KEGG: 00360+1.11.1.21|KEGG: 00380+1.11.1.21|KEGG: 00940+1.11.1.21|MetaCyc: PWY-5506 SRM_RS13455 50b66129847e5de35e80143d6f4f55a7 715 PRINTS PR00460 Bacterial haem catalase-peroxidase signature 31 44 3.5E-47 T 22-04-2016 IPR000763 Catalase-peroxidase haem GO:0004096|GO:0004601|GO:0006979|GO:0020037|GO:0055114 KEGG: 00360+1.11.1.21|KEGG: 00380+1.11.1.21|KEGG: 00940+1.11.1.21|MetaCyc: PWY-5506 SRM_RS13455 50b66129847e5de35e80143d6f4f55a7 715 PRINTS PR00460 Bacterial haem catalase-peroxidase signature 5 27 3.5E-47 T 22-04-2016 IPR000763 Catalase-peroxidase haem GO:0004096|GO:0004601|GO:0006979|GO:0020037|GO:0055114 KEGG: 00360+1.11.1.21|KEGG: 00380+1.11.1.21|KEGG: 00940+1.11.1.21|MetaCyc: PWY-5506 SRM_RS13455 50b66129847e5de35e80143d6f4f55a7 715 PRINTS PR00460 Bacterial haem catalase-peroxidase signature 46 71 3.5E-47 T 22-04-2016 IPR000763 Catalase-peroxidase haem GO:0004096|GO:0004601|GO:0006979|GO:0020037|GO:0055114 KEGG: 00360+1.11.1.21|KEGG: 00380+1.11.1.21|KEGG: 00940+1.11.1.21|MetaCyc: PWY-5506 SRM_RS13455 50b66129847e5de35e80143d6f4f55a7 715 Gene3D G3DSA:1.10.420.10 566 688 1.1E-39 T 22-04-2016 SRM_RS13455 50b66129847e5de35e80143d6f4f55a7 715 SUPERFAMILY SSF48113 5 405 2.06E-141 T 22-04-2016 IPR010255 Haem peroxidase GO:0004601|GO:0006979|GO:0020037|GO:0055114 SRM_RS13455 50b66129847e5de35e80143d6f4f55a7 715 Gene3D G3DSA:1.10.420.10 284 383 3.5E-43 T 22-04-2016 SRM_RS13455 50b66129847e5de35e80143d6f4f55a7 715 Gene3D G3DSA:1.10.420.10 225 248 3.5E-43 T 22-04-2016 SRM_RS12540 26edf74b31abac1e100bfbd290627712 437 Gene3D G3DSA:1.10.275.10 28 123 2.0E-37 T 22-04-2016 IPR024083 Fumarase/histidase, N-terminal SRM_RS12540 26edf74b31abac1e100bfbd290627712 437 Gene3D G3DSA:1.10.275.10 196 228 2.0E-37 T 22-04-2016 IPR024083 Fumarase/histidase, N-terminal SRM_RS12540 26edf74b31abac1e100bfbd290627712 437 TIGRFAM TIGR00838 argH: argininosuccinate lyase 6 392 1.7E-95 T 22-04-2016 IPR009049 Argininosuccinate lyase GO:0004056|GO:0042450 KEGG: 00220+4.3.2.1|KEGG: 00250+4.3.2.1|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 SRM_RS12540 26edf74b31abac1e100bfbd290627712 437 PRINTS PR00145 Argininosuccinate lyase family signature 316 335 1.0E-28 T 22-04-2016 SRM_RS12540 26edf74b31abac1e100bfbd290627712 437 PRINTS PR00145 Argininosuccinate lyase family signature 146 166 1.0E-28 T 22-04-2016 SRM_RS12540 26edf74b31abac1e100bfbd290627712 437 PRINTS PR00145 Argininosuccinate lyase family signature 105 127 1.0E-28 T 22-04-2016 SRM_RS12540 26edf74b31abac1e100bfbd290627712 437 PRINTS PR00145 Argininosuccinate lyase family signature 281 297 1.0E-28 T 22-04-2016 SRM_RS12540 26edf74b31abac1e100bfbd290627712 437 ProSitePatterns PS00163 Fumarate lyases signature. 281 290 - T 22-04-2016 IPR020557 Fumarate lyase, conserved site GO:0003824 SRM_RS12540 26edf74b31abac1e100bfbd290627712 437 Pfam PF00206 Lyase 37 299 8.6E-48 T 22-04-2016 IPR022761 Fumarate lyase, N-terminal SRM_RS12540 26edf74b31abac1e100bfbd290627712 437 PANTHER PTHR11444 15 390 1.2E-116 T 22-04-2016 IPR000362 Fumarate lyase family SRM_RS12540 26edf74b31abac1e100bfbd290627712 437 SUPERFAMILY SSF48557 5 394 6.13E-94 T 22-04-2016 IPR008948 L-Aspartase-like GO:0003824 SRM_RS12540 26edf74b31abac1e100bfbd290627712 437 Gene3D G3DSA:1.20.200.10 229 391 3.2E-60 T 22-04-2016 SRM_RS12540 26edf74b31abac1e100bfbd290627712 437 Gene3D G3DSA:1.20.200.10 124 186 3.2E-60 T 22-04-2016 SRM_RS12540 26edf74b31abac1e100bfbd290627712 437 PRINTS PR00149 Fumarate lyase superfamily signature 151 169 4.9E-17 T 22-04-2016 IPR000362 Fumarate lyase family SRM_RS12540 26edf74b31abac1e100bfbd290627712 437 PRINTS PR00149 Fumarate lyase superfamily signature 281 297 4.9E-17 T 22-04-2016 IPR000362 Fumarate lyase family SRM_RS12540 26edf74b31abac1e100bfbd290627712 437 PRINTS PR00149 Fumarate lyase superfamily signature 106 124 4.9E-17 T 22-04-2016 IPR000362 Fumarate lyase family SRM_RS12540 26edf74b31abac1e100bfbd290627712 437 PANTHER PTHR11444:SF3 15 390 1.2E-116 T 22-04-2016 IPR009049 Argininosuccinate lyase GO:0004056|GO:0042450 KEGG: 00220+4.3.2.1|KEGG: 00250+4.3.2.1|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 SRM_RS10235 d1b09d4a71bc852feb2ad3f41d200fc6 1030 Pfam PF00009 Elongation factor Tu GTP binding domain 530 688 1.1E-29 T 22-04-2016 SRM_RS10235 d1b09d4a71bc852feb2ad3f41d200fc6 1030 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 529 687 2.1E-27 T 22-04-2016 IPR005225 Small GTP-binding protein domain GO:0005525 SRM_RS10235 d1b09d4a71bc852feb2ad3f41d200fc6 1030 PANTHER PTHR23115 510 856 1.3E-182 T 22-04-2016 SRM_RS10235 d1b09d4a71bc852feb2ad3f41d200fc6 1030 PANTHER PTHR23115 881 1030 1.3E-182 T 22-04-2016 SRM_RS10235 d1b09d4a71bc852feb2ad3f41d200fc6 1030 Gene3D G3DSA:3.40.50.10050 828 907 2.3E-25 T 22-04-2016 IPR023115 Translation initiation factor IF- 2, domain 3 SRM_RS10235 d1b09d4a71bc852feb2ad3f41d200fc6 1030 Pfam PF04760 Translation initiation factor IF-2, N-terminal region 452 501 1.2E-10 T 22-04-2016 IPR006847 Translation initiation factor IF-2, N-terminal SRM_RS10235 d1b09d4a71bc852feb2ad3f41d200fc6 1030 PANTHER PTHR23115:SF184 510 856 1.3E-182 T 22-04-2016 SRM_RS10235 d1b09d4a71bc852feb2ad3f41d200fc6 1030 PANTHER PTHR23115:SF184 881 1030 1.3E-182 T 22-04-2016 SRM_RS10235 d1b09d4a71bc852feb2ad3f41d200fc6 1030 Gene3D G3DSA:2.40.30.10 930 1026 1.0E-33 T 22-04-2016 SRM_RS10235 d1b09d4a71bc852feb2ad3f41d200fc6 1030 SUPERFAMILY SSF50447 930 1025 7.07E-31 T 22-04-2016 IPR009000 Translation protein, beta-barrel domain SRM_RS10235 d1b09d4a71bc852feb2ad3f41d200fc6 1030 Hamap MF_00100_B Translation initiation factor IF-2 [infB]. 10 1026 16.825 T 22-04-2016 IPR000178 Translation initiation factor aIF-2, bacterial-like GO:0003743|GO:0005525|GO:0005622|GO:0006413 SRM_RS10235 d1b09d4a71bc852feb2ad3f41d200fc6 1030 SUPERFAMILY SSF50447 700 783 6.86E-20 T 22-04-2016 IPR009000 Translation protein, beta-barrel domain SRM_RS10235 d1b09d4a71bc852feb2ad3f41d200fc6 1030 PRINTS PR00315 GTP-binding elongation factor signature 529 542 7.6E-6 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 SRM_RS10235 d1b09d4a71bc852feb2ad3f41d200fc6 1030 PRINTS PR00315 GTP-binding elongation factor signature 596 607 7.6E-6 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 SRM_RS10235 d1b09d4a71bc852feb2ad3f41d200fc6 1030 PRINTS PR00315 GTP-binding elongation factor signature 632 641 7.6E-6 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 SRM_RS10235 d1b09d4a71bc852feb2ad3f41d200fc6 1030 SUPERFAMILY SSF52156 805 935 1.01E-35 T 22-04-2016 IPR023115 Translation initiation factor IF- 2, domain 3 SRM_RS10235 d1b09d4a71bc852feb2ad3f41d200fc6 1030 Pfam PF11987 Translation-initiation factor 2 814 917 6.3E-37 T 22-04-2016 IPR023115 Translation initiation factor IF- 2, domain 3 SRM_RS10235 d1b09d4a71bc852feb2ad3f41d200fc6 1030 SUPERFAMILY SSF52540 512 700 1.08E-45 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SRM_RS10235 d1b09d4a71bc852feb2ad3f41d200fc6 1030 Gene3D G3DSA:2.40.30.10 699 792 2.4E-18 T 22-04-2016 SRM_RS10235 d1b09d4a71bc852feb2ad3f41d200fc6 1030 Gene3D G3DSA:3.40.50.300 519 687 2.3E-40 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SRM_RS10235 d1b09d4a71bc852feb2ad3f41d200fc6 1030 TIGRFAM TIGR00487 IF-2: translation initiation factor IF-2 447 1026 4.4E-235 T 22-04-2016 IPR000178 Translation initiation factor aIF-2, bacterial-like GO:0003743|GO:0005525|GO:0005622|GO:0006413 SRM_RS08090 b5e34efe1eda00988651525a8d933208 149 Pfam PF03948 Ribosomal protein L9, C-terminal domain 63 145 1.2E-22 T 22-04-2016 IPR020069 Ribosomal protein L9, C-terminal SRM_RS08090 b5e34efe1eda00988651525a8d933208 149 Gene3D G3DSA:3.10.430.100 61 147 1.3E-24 T 22-04-2016 IPR020069 Ribosomal protein L9, C-terminal SRM_RS08090 b5e34efe1eda00988651525a8d933208 149 TIGRFAM TIGR00158 L9: ribosomal protein bL9 1 147 3.7E-44 T 22-04-2016 IPR020594 Ribosomal protein L9, bacteria/chloroplast GO:0003735|GO:0005622|GO:0005840|GO:0006412 SRM_RS08090 b5e34efe1eda00988651525a8d933208 149 SUPERFAMILY SSF55658 1 57 1.27E-17 T 22-04-2016 IPR009027 Ribosomal protein L9/RNase H1, N-terminal SRM_RS08090 b5e34efe1eda00988651525a8d933208 149 SUPERFAMILY SSF55653 57 147 1.7E-22 T 22-04-2016 IPR020069 Ribosomal protein L9, C-terminal SRM_RS08090 b5e34efe1eda00988651525a8d933208 149 Pfam PF01281 Ribosomal protein L9, N-terminal domain 1 47 3.0E-21 T 22-04-2016 IPR020070 Ribosomal protein L9, N-terminal SRM_RS08090 b5e34efe1eda00988651525a8d933208 149 ProSitePatterns PS00651 Ribosomal protein L9 signature. 13 40 - T 22-04-2016 IPR020070 Ribosomal protein L9, N-terminal SRM_RS08090 b5e34efe1eda00988651525a8d933208 149 Hamap MF_00503 50S ribosomal protein L9 [rplI]. 1 147 24.23 T 22-04-2016 IPR020594 Ribosomal protein L9, bacteria/chloroplast GO:0003735|GO:0005622|GO:0005840|GO:0006412 SRM_RS08090 b5e34efe1eda00988651525a8d933208 149 Gene3D G3DSA:3.40.5.10 1 51 1.2E-22 T 22-04-2016 IPR020070 Ribosomal protein L9, N-terminal SRM_RS08450 9bf3aefe64bab2df26d76b68db60ff78 563 Gene3D G3DSA:4.10.860.10 382 440 3.6E-16 T 22-04-2016 IPR001943 UVR domain GO:0005515 SRM_RS08450 9bf3aefe64bab2df26d76b68db60ff78 563 SUPERFAMILY SSF46600 388 440 1.96E-11 T 22-04-2016 IPR001943 UVR domain GO:0005515 SRM_RS08450 9bf3aefe64bab2df26d76b68db60ff78 563 Pfam PF01541 GIY-YIG catalytic domain 216 292 5.9E-7 T 22-04-2016 IPR000305 GIY-YIG nuclease superfamily SRM_RS08450 9bf3aefe64bab2df26d76b68db60ff78 563 Gene3D G3DSA:3.40.1440.10 215 291 2.3E-6 T 22-04-2016 IPR027299 GIY-YIG domain SRM_RS08450 9bf3aefe64bab2df26d76b68db60ff78 563 SUPERFAMILY SSF82771 215 294 9.02E-17 T 22-04-2016 IPR000305 GIY-YIG nuclease superfamily SRM_RS08450 9bf3aefe64bab2df26d76b68db60ff78 563 Pfam PF02151 UvrB/uvrC motif 409 435 8.3E-9 T 22-04-2016 IPR001943 UVR domain GO:0005515 SRM_RS08450 9bf3aefe64bab2df26d76b68db60ff78 563 Gene3D G3DSA:3.30.420.10 3 171 5.0E-56 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 SRM_RS08450 9bf3aefe64bab2df26d76b68db60ff78 563 SUPERFAMILY SSF53098 4 172 1.38E-53 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 SRM_RS08450 9bf3aefe64bab2df26d76b68db60ff78 563 SMART SM00479 7 173 1.7E-43 T 22-04-2016 IPR013520 Exonuclease, RNase T/DNA polymerase III SRM_RS08450 9bf3aefe64bab2df26d76b68db60ff78 563 Pfam PF00929 Exonuclease 9 160 1.2E-31 T 22-04-2016 IPR013520 Exonuclease, RNase T/DNA polymerase III SRM_RS08450 9bf3aefe64bab2df26d76b68db60ff78 563 PANTHER PTHR30562 183 549 3.4E-78 T 22-04-2016 SRM_RS08450 9bf3aefe64bab2df26d76b68db60ff78 563 SMART SM00465 215 297 5.3E-13 T 22-04-2016 IPR000305 GIY-YIG nuclease superfamily SRM_RS08450 9bf3aefe64bab2df26d76b68db60ff78 563 PANTHER PTHR30562:SF1 183 549 3.4E-78 T 22-04-2016 SRM_RS08450 9bf3aefe64bab2df26d76b68db60ff78 563 TIGRFAM TIGR00573 dnaq: exonuclease, DNA polymerase III, epsilon subunit family 5 179 2.4E-28 T 22-04-2016 IPR006054 DNA polymerase III, epsilon subunit GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 SRM_RS11170 3aad1da1c23109c29630ad5d92eba81a 286 SUPERFAMILY SSF55021 190 276 1.07E-20 T 22-04-2016 SRM_RS11170 3aad1da1c23109c29630ad5d92eba81a 286 SUPERFAMILY SSF53850 4 183 2.82E-55 T 22-04-2016 SRM_RS11170 3aad1da1c23109c29630ad5d92eba81a 286 Gene3D G3DSA:3.40.190.10 89 169 1.6E-30 T 22-04-2016 SRM_RS11170 3aad1da1c23109c29630ad5d92eba81a 286 Gene3D G3DSA:3.30.70.260 193 276 9.2E-27 T 22-04-2016 SRM_RS11170 3aad1da1c23109c29630ad5d92eba81a 286 ProSitePatterns PS00857 Prephenate dehydratase signature 1. 157 179 - T 22-04-2016 IPR018528 Prephenate dehydratase, conserved site GO:0004664|GO:0009094 KEGG: 00400+4.2.1.51|MetaCyc: PWY-7432|UniPathway: UPA00121 SRM_RS11170 3aad1da1c23109c29630ad5d92eba81a 286 PANTHER PTHR21022 5 280 5.5E-114 T 22-04-2016 SRM_RS11170 3aad1da1c23109c29630ad5d92eba81a 286 Gene3D G3DSA:3.40.190.10 2 88 3.1E-28 T 22-04-2016 SRM_RS11170 3aad1da1c23109c29630ad5d92eba81a 286 Pfam PF00800 Prephenate dehydratase 5 181 2.0E-59 T 22-04-2016 IPR001086 Prephenate dehydratase GO:0004664|GO:0009094 KEGG: 00400+4.2.1.51|MetaCyc: PWY-7432|UniPathway: UPA00121 SRM_RS11170 3aad1da1c23109c29630ad5d92eba81a 286 PIRSF PIRSF001500 1 278 1.6E-73 T 22-04-2016 IPR008242 Bifunctional P-protein, chorismate mutase/prephenate dehydratase GO:0004106|GO:0004664|GO:0005737|GO:0009094 KEGG: 00400+4.2.1.51|MetaCyc: PWY-7432|UniPathway: UPA00121 SRM_RS04365 0f519c752199ec16b360cdd07247639a 95 Pfam PF03683 Uncharacterised protein family (UPF0175) 12 85 8.7E-27 T 22-04-2016 IPR005368 Uncharacterised protein family UPF0175 SRM_RS04365 0f519c752199ec16b360cdd07247639a 95 PANTHER PTHR37525 3 91 3.2E-14 T 22-04-2016 SRM_RS02320 c0da1f0a2b9669232aa95c6212c46a50 387 Pfam PF00534 Glycosyl transferases group 1 195 358 7.1E-41 T 22-04-2016 IPR001296 Glycosyl transferase, family 1 SRM_RS02320 c0da1f0a2b9669232aa95c6212c46a50 387 Gene3D G3DSA:3.40.50.2000 164 358 3.4E-48 T 22-04-2016 SRM_RS02320 c0da1f0a2b9669232aa95c6212c46a50 387 Pfam PF13439 Glycosyltransferase Family 4 14 180 4.1E-20 T 22-04-2016 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain SRM_RS02320 c0da1f0a2b9669232aa95c6212c46a50 387 SUPERFAMILY SSF53756 2 381 3.45E-86 T 22-04-2016 SRM_RS02320 c0da1f0a2b9669232aa95c6212c46a50 387 PANTHER PTHR12526 1 387 1.8E-76 T 22-04-2016 SRM_RS15345 b7f06e6eaaed02113bbb5da049ccf158 228 SUPERFAMILY SSF51735 2 216 5.68E-40 T 22-04-2016 IPR016040 NAD(P)-binding domain SRM_RS15345 b7f06e6eaaed02113bbb5da049ccf158 228 Pfam PF00106 short chain dehydrogenase 3 187 8.5E-27 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SRM_RS15345 b7f06e6eaaed02113bbb5da049ccf158 228 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 73 84 6.83E-10 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SRM_RS15345 b7f06e6eaaed02113bbb5da049ccf158 228 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 3 20 6.83E-10 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SRM_RS15345 b7f06e6eaaed02113bbb5da049ccf158 228 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 193 213 6.83E-10 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SRM_RS15345 b7f06e6eaaed02113bbb5da049ccf158 228 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 146 165 6.83E-10 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SRM_RS15345 b7f06e6eaaed02113bbb5da049ccf158 228 Gene3D G3DSA:3.40.50.720 2 216 1.3E-44 T 22-04-2016 IPR016040 NAD(P)-binding domain SRM_RS15345 b7f06e6eaaed02113bbb5da049ccf158 228 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 133 161 - T 22-04-2016 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 SRM_RS14040 9d27c6a99d9ff711c968e9ab9baa419b 158 Pfam PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region 10 108 3.4E-19 T 22-04-2016 IPR002125 Cytidine and deoxycytidylate deaminases, zinc-binding GO:0008270 SRM_RS14040 9d27c6a99d9ff711c968e9ab9baa419b 158 Gene3D G3DSA:3.40.140.10 6 155 9.4E-43 T 22-04-2016 SRM_RS14040 9d27c6a99d9ff711c968e9ab9baa419b 158 ProSitePatterns PS00903 Cytidine and deoxycytidylate deaminases zinc-binding region signature. 60 97 - T 22-04-2016 IPR016192 APOBEC/CMP deaminase, zinc-binding GO:0008270|GO:0016787 SRM_RS14040 9d27c6a99d9ff711c968e9ab9baa419b 158 PANTHER PTHR11079 9 114 1.2E-27 T 22-04-2016 SRM_RS14040 9d27c6a99d9ff711c968e9ab9baa419b 158 SUPERFAMILY SSF53927 7 155 8.5E-40 T 22-04-2016 IPR016193 Cytidine deaminase-like GO:0003824 SRM_RS10245 160614ec2b2b881c230deae8dc8728bd 160 Gene3D G3DSA:3.30.300.70 11 89 5.0E-19 T 22-04-2016 IPR028989 Ribosome maturation factor RimP, N-terminal SRM_RS10245 160614ec2b2b881c230deae8dc8728bd 160 Gene3D G3DSA:2.30.30.180 98 156 6.9E-4 T 22-04-2016 IPR028998 Ribosome maturation factor RimP, C-terminal SRM_RS10245 160614ec2b2b881c230deae8dc8728bd 160 Hamap MF_01077 Ribosome maturation factor RimP [rimP]. 15 160 20.257 T 22-04-2016 IPR003728 Ribosome maturation factor RimP GO:0042274 SRM_RS10245 160614ec2b2b881c230deae8dc8728bd 160 PANTHER PTHR33867:SF1 9 160 4.4E-24 T 22-04-2016 SRM_RS10245 160614ec2b2b881c230deae8dc8728bd 160 Pfam PF02576 Putative ribosome maturation factor RimP 22 156 5.8E-31 T 22-04-2016 IPR003728 Ribosome maturation factor RimP GO:0042274 SRM_RS10245 160614ec2b2b881c230deae8dc8728bd 160 SUPERFAMILY SSF74942 93 158 4.18E-7 T 22-04-2016 IPR028998 Ribosome maturation factor RimP, C-terminal SRM_RS10245 160614ec2b2b881c230deae8dc8728bd 160 PANTHER PTHR33867 9 160 4.4E-24 T 22-04-2016 SRM_RS10245 160614ec2b2b881c230deae8dc8728bd 160 SUPERFAMILY SSF75420 10 91 2.09E-18 T 22-04-2016 IPR028989 Ribosome maturation factor RimP, N-terminal SRM_RS12215 b160a0d115eac6a8e70ba041bb899d66 139 Gene3D G3DSA:3.10.129.10 12 135 2.1E-35 T 22-04-2016 IPR029069 HotDog domain SRM_RS12215 b160a0d115eac6a8e70ba041bb899d66 139 SUPERFAMILY SSF54637 15 135 1.16E-32 T 22-04-2016 IPR029069 HotDog domain SRM_RS12215 b160a0d115eac6a8e70ba041bb899d66 139 PANTHER PTHR31793 9 135 5.7E-25 T 22-04-2016 SRM_RS12215 b160a0d115eac6a8e70ba041bb899d66 139 Pfam PF13279 Thioesterase-like superfamily 23 134 8.1E-14 T 22-04-2016 SRM_RS06280 2148fb2e748ab7d04aeefb9eef0b9a33 454 PANTHER PTHR12526 11 61 2.6E-13 T 22-04-2016 SRM_RS06280 2148fb2e748ab7d04aeefb9eef0b9a33 454 PANTHER PTHR12526 104 412 2.6E-13 T 22-04-2016 SRM_RS06280 2148fb2e748ab7d04aeefb9eef0b9a33 454 SUPERFAMILY SSF53756 128 415 5.83E-32 T 22-04-2016 SRM_RS06280 2148fb2e748ab7d04aeefb9eef0b9a33 454 SUPERFAMILY SSF53756 20 84 5.83E-32 T 22-04-2016 SRM_RS06280 2148fb2e748ab7d04aeefb9eef0b9a33 454 Pfam PF13692 Glycosyl transferases group 1 270 413 5.4E-8 T 22-04-2016 SRM_RS06280 2148fb2e748ab7d04aeefb9eef0b9a33 454 Pfam PF13439 Glycosyltransferase Family 4 100 254 1.1E-12 T 22-04-2016 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain SRM_RS15415 f1e285d9585534911e6eed29acceb12a 199 Pfam PF01121 Dephospho-CoA kinase 4 182 2.4E-39 T 22-04-2016 IPR001977 Dephospho-CoA kinase GO:0004140|GO:0005524|GO:0015937 KEGG: 00770+2.7.1.24|UniPathway: UPA00241 SRM_RS15415 f1e285d9585534911e6eed29acceb12a 199 Hamap MF_00376 Dephospho-CoA kinase [coaE]. 1 198 22.051 T 22-04-2016 IPR001977 Dephospho-CoA kinase GO:0004140|GO:0005524|GO:0015937 KEGG: 00770+2.7.1.24|UniPathway: UPA00241 SRM_RS15415 f1e285d9585534911e6eed29acceb12a 199 SUPERFAMILY SSF52540 4 187 1.01E-26 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SRM_RS15415 f1e285d9585534911e6eed29acceb12a 199 PANTHER PTHR10695 4 195 3.7E-46 T 22-04-2016 SRM_RS15415 f1e285d9585534911e6eed29acceb12a 199 Gene3D G3DSA:3.40.50.300 3 191 1.6E-54 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SRM_RS15415 f1e285d9585534911e6eed29acceb12a 199 TIGRFAM TIGR00152 TIGR00152: dephospho-CoA kinase 4 187 1.1E-35 T 22-04-2016 IPR001977 Dephospho-CoA kinase GO:0004140|GO:0005524|GO:0015937 KEGG: 00770+2.7.1.24|UniPathway: UPA00241 SRM_RS08335 50c2bb97c4ed382f7ec60b7074d6105c 413 PANTHER PTHR11601 114 392 1.9E-35 T 22-04-2016 SRM_RS08335 50c2bb97c4ed382f7ec60b7074d6105c 413 Gene3D G3DSA:3.40.640.10 81 237 2.0E-18 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 SRM_RS08335 50c2bb97c4ed382f7ec60b7074d6105c 413 Gene3D G3DSA:3.90.1150.10 257 409 4.7E-26 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 SRM_RS08335 50c2bb97c4ed382f7ec60b7074d6105c 413 Pfam PF00266 Aminotransferase class-V 112 348 1.0E-22 T 22-04-2016 IPR000192 Aminotransferase class V domain SRM_RS08335 50c2bb97c4ed382f7ec60b7074d6105c 413 PANTHER PTHR11601:SF31 114 392 1.9E-35 T 22-04-2016 SRM_RS08335 50c2bb97c4ed382f7ec60b7074d6105c 413 SUPERFAMILY SSF53383 79 396 1.79E-58 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase SRM_RS13000 e963ae38a857fbbcf676f00e98bc0e72 315 PANTHER PTHR11579 18 157 4.8E-48 T 22-04-2016 IPR000682 Protein-L-isoaspartate(D-aspartate) O-methyltransferase GO:0004719|GO:0006464 SRM_RS13000 e963ae38a857fbbcf676f00e98bc0e72 315 Gene3D G3DSA:3.40.50.150 28 158 6.4E-44 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SRM_RS13000 e963ae38a857fbbcf676f00e98bc0e72 315 Pfam PF01135 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) 26 158 1.9E-35 T 22-04-2016 SRM_RS13000 e963ae38a857fbbcf676f00e98bc0e72 315 SUPERFAMILY SSF53335 22 158 8.8E-36 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SRM_RS11750 0ee06e6400484a4425270e1a75e1fafe 303 TIGRFAM TIGR00536 hemK_fam: methyltransferase, HemK family 20 298 1.1E-60 T 22-04-2016 IPR004556 Modification methylase HemK GO:0006479|GO:0008276 SRM_RS11750 0ee06e6400484a4425270e1a75e1fafe 303 Gene3D G3DSA:1.10.8.10 20 101 2.7E-24 T 22-04-2016 SRM_RS11750 0ee06e6400484a4425270e1a75e1fafe 303 Gene3D G3DSA:3.40.50.150 103 296 1.0E-59 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SRM_RS11750 0ee06e6400484a4425270e1a75e1fafe 303 TIGRFAM TIGR03534 RF_mod_PrmC: protein-(glutamine-N5) methyltransferase, release factor-specific 41 293 2.0E-81 T 22-04-2016 IPR019874 Protein-(glutamine-N5) methyltransferase, release factor-specific GO:0008168 SRM_RS11750 0ee06e6400484a4425270e1a75e1fafe 303 PANTHER PTHR18895:SF64 9 296 2.1E-85 T 22-04-2016 SRM_RS11750 0ee06e6400484a4425270e1a75e1fafe 303 SUPERFAMILY SSF53335 20 295 6.97E-52 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SRM_RS11750 0ee06e6400484a4425270e1a75e1fafe 303 Hamap MF_02126 Release factor glutamine methyltransferase [prmC]. 18 297 44.644 T 22-04-2016 IPR019874 Protein-(glutamine-N5) methyltransferase, release factor-specific GO:0008168 SRM_RS11750 0ee06e6400484a4425270e1a75e1fafe 303 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 200 206 - T 22-04-2016 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 SRM_RS11750 0ee06e6400484a4425270e1a75e1fafe 303 Pfam PF05175 Methyltransferase small domain 122 208 3.9E-16 T 22-04-2016 IPR007848 Methyltransferase small domain GO:0008168 SRM_RS11750 0ee06e6400484a4425270e1a75e1fafe 303 PANTHER PTHR18895 9 296 2.1E-85 T 22-04-2016 SRM_RS04150 ff58b8486e3bca5e96d509e849c953f3 149 SUPERFAMILY SSF88723 5 123 5.33E-15 T 22-04-2016 IPR029060 PIN domain-like SRM_RS04150 ff58b8486e3bca5e96d509e849c953f3 149 Gene3D G3DSA:3.40.50.1010 5 123 7.3E-8 T 22-04-2016 IPR029060 PIN domain-like SRM_RS04150 ff58b8486e3bca5e96d509e849c953f3 149 Pfam PF01850 PIN domain 5 123 9.0E-11 T 22-04-2016 IPR002716 PIN domain SRM_RS11440 a00453600037c73d5a301d2c464e6e4d 1190 SUPERFAMILY SSF52540 40 228 9.38E-19 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SRM_RS11440 a00453600037c73d5a301d2c464e6e4d 1190 SUPERFAMILY SSF52540 796 921 9.38E-19 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SRM_RS11440 a00453600037c73d5a301d2c464e6e4d 1190 Pfam PF13476 AAA domain 40 257 8.3E-7 T 22-04-2016 SRM_RS11440 a00453600037c73d5a301d2c464e6e4d 1190 PANTHER PTHR41259 161 945 7.0E-19 T 22-04-2016 SRM_RS11440 a00453600037c73d5a301d2c464e6e4d 1190 PANTHER PTHR41259:SF1 161 945 7.0E-19 T 22-04-2016 SRM_RS11440 a00453600037c73d5a301d2c464e6e4d 1190 SMART SM00382 41 388 0.0061 T 22-04-2016 IPR003593 AAA+ ATPase domain SRM_RS11440 a00453600037c73d5a301d2c464e6e4d 1190 Gene3D G3DSA:3.40.50.300 258 281 5.8E-22 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SRM_RS11440 a00453600037c73d5a301d2c464e6e4d 1190 Gene3D G3DSA:3.40.50.300 36 203 5.8E-22 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SRM_RS11440 a00453600037c73d5a301d2c464e6e4d 1190 Gene3D G3DSA:3.40.50.300 833 922 5.8E-22 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SRM_RS03830 a5979c68c93a69f737971a2eb0baf722 237 SUPERFAMILY SSF52172 8 189 1.46E-41 T 22-04-2016 IPR011006 CheY-like superfamily SRM_RS03830 a5979c68c93a69f737971a2eb0baf722 237 SMART SM00862 155 228 3.2E-26 T 22-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 SRM_RS03830 a5979c68c93a69f737971a2eb0baf722 237 Gene3D G3DSA:1.10.10.10 133 231 2.1E-32 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SRM_RS03830 a5979c68c93a69f737971a2eb0baf722 237 SMART SM00448 10 122 6.4E-44 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SRM_RS03830 a5979c68c93a69f737971a2eb0baf722 237 PANTHER PTHR26402 10 228 3.2E-84 T 22-04-2016 SRM_RS03830 a5979c68c93a69f737971a2eb0baf722 237 Pfam PF00072 Response regulator receiver domain 12 122 5.6E-28 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SRM_RS03830 a5979c68c93a69f737971a2eb0baf722 237 PANTHER PTHR26402:SF614 10 228 3.2E-84 T 22-04-2016 SRM_RS03830 a5979c68c93a69f737971a2eb0baf722 237 Gene3D G3DSA:3.40.50.2300 7 132 2.8E-41 T 22-04-2016 SRM_RS03830 a5979c68c93a69f737971a2eb0baf722 237 Pfam PF00486 Transcriptional regulatory protein, C terminal 155 228 5.0E-25 T 22-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 SRM_RS14870 cfab8bda1a0e9270ef527fcbe7188c93 610 SUPERFAMILY SSF56112 270 405 7.7E-25 T 22-04-2016 IPR011009 Protein kinase-like domain SRM_RS14870 cfab8bda1a0e9270ef527fcbe7188c93 610 SUPERFAMILY SSF56112 175 238 7.7E-25 T 22-04-2016 IPR011009 Protein kinase-like domain SRM_RS14870 cfab8bda1a0e9270ef527fcbe7188c93 610 Pfam PF03109 ABC1 family 193 308 1.9E-31 T 22-04-2016 IPR004147 UbiB domain SRM_RS14870 cfab8bda1a0e9270ef527fcbe7188c93 610 Gene3D G3DSA:3.90.1200.10 349 395 1.3E-4 T 22-04-2016 SRM_RS14870 cfab8bda1a0e9270ef527fcbe7188c93 610 PANTHER PTHR10566 136 524 2.2E-115 T 22-04-2016 SRM_RS07235 164d45ad537ab5296dc02b2d19721af8 238 SUPERFAMILY SSF48452 114 226 2.97E-12 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 SRM_RS07235 164d45ad537ab5296dc02b2d19721af8 238 Gene3D G3DSA:1.25.40.10 114 220 6.3E-12 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 SRM_RS07235 164d45ad537ab5296dc02b2d19721af8 238 Pfam PF13174 Tetratricopeptide repeat 185 215 1.1E-6 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 SRM_RS07235 164d45ad537ab5296dc02b2d19721af8 238 SMART SM00028 182 215 0.056 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 SRM_RS07235 164d45ad537ab5296dc02b2d19721af8 238 SMART SM00028 145 178 69.0 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 SRM_RS13020 603c4fc66000b3f59c5be5f0188b558d 257 Gene3D G3DSA:3.90.550.10 10 200 9.9E-16 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases SRM_RS13020 603c4fc66000b3f59c5be5f0188b558d 257 SUPERFAMILY SSF53448 7 206 3.85E-36 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases SRM_RS13020 603c4fc66000b3f59c5be5f0188b558d 257 PANTHER PTHR10859:SF95 10 208 5.8E-41 T 22-04-2016 SRM_RS13020 603c4fc66000b3f59c5be5f0188b558d 257 Pfam PF00535 Glycosyl transferase family 2 9 164 2.8E-20 T 22-04-2016 IPR001173 Glycosyltransferase 2-like SRM_RS13020 603c4fc66000b3f59c5be5f0188b558d 257 PANTHER PTHR10859 10 208 5.8E-41 T 22-04-2016 SRM_RS15980 e0f3d14fd70eca2e466166d9d8c05b25 150 Gene3D G3DSA:1.10.443.10 1 62 1.3E-5 T 22-04-2016 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 SRM_RS15980 e0f3d14fd70eca2e466166d9d8c05b25 150 SUPERFAMILY SSF53098 67 149 1.52E-6 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 SRM_RS15980 e0f3d14fd70eca2e466166d9d8c05b25 150 SUPERFAMILY SSF56349 1 86 4.71E-6 T 22-04-2016 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 SRM_RS01280 56fe69f647a2eae74de9d22661116b85 276 PANTHER PTHR10120 1 274 6.7E-106 T 22-04-2016 SRM_RS01280 56fe69f647a2eae74de9d22661116b85 276 PANTHER PTHR10120:SF19 1 274 6.7E-106 T 22-04-2016 SRM_RS01280 56fe69f647a2eae74de9d22661116b85 276 Gene3D G3DSA:3.30.2010.10 56 146 6.7E-35 T 22-04-2016 SRM_RS01280 56fe69f647a2eae74de9d22661116b85 276 Hamap MF_00188 Protease HtpX [htpX]. 3 271 28.294 T 22-04-2016 IPR022919 Peptidase M48, protease HtpX, putative GO:0004222 SRM_RS01280 56fe69f647a2eae74de9d22661116b85 276 Pfam PF01435 Peptidase family M48 65 271 2.5E-39 T 22-04-2016 IPR001915 Peptidase M48 GO:0004222|GO:0006508 SRM_RS04035 54ab199fc6985aa8aa3d7164dab4b1b9 479 TIGRFAM TIGR03026 NDP-sugDHase: nucleotide sugar dehydrogenase 46 460 1.4E-118 T 22-04-2016 IPR017476 UDP-glucose/GDP-mannose dehydrogenase GO:0016616|GO:0055114 SRM_RS04035 54ab199fc6985aa8aa3d7164dab4b1b9 479 PIRSF PIRSF000124 45 477 1.2E-58 T 22-04-2016 IPR017476 UDP-glucose/GDP-mannose dehydrogenase GO:0016616|GO:0055114 SRM_RS04035 54ab199fc6985aa8aa3d7164dab4b1b9 479 Gene3D G3DSA:3.40.50.720 277 464 2.0E-45 T 22-04-2016 IPR016040 NAD(P)-binding domain SRM_RS04035 54ab199fc6985aa8aa3d7164dab4b1b9 479 SMART SM00984 363 464 4.0E-28 T 22-04-2016 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 SRM_RS04035 54ab199fc6985aa8aa3d7164dab4b1b9 479 Pfam PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain 46 224 1.5E-39 T 22-04-2016 IPR001732 UDP-glucose/GDP-mannose dehydrogenase, N-terminal GO:0016616|GO:0051287|GO:0055114 SRM_RS04035 54ab199fc6985aa8aa3d7164dab4b1b9 479 PIRSF PIRSF500136 35 477 1.5E-138 T 22-04-2016 IPR028359 UDP-N-acetyl-D-mannosamine/glucosamine dehydrogenase GO:0000271|GO:0016628|GO:0055114 SRM_RS04035 54ab199fc6985aa8aa3d7164dab4b1b9 479 PANTHER PTHR11374 42 471 2.0E-157 T 22-04-2016 IPR017476 UDP-glucose/GDP-mannose dehydrogenase GO:0016616|GO:0055114 SRM_RS04035 54ab199fc6985aa8aa3d7164dab4b1b9 479 Pfam PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain 363 462 3.6E-20 T 22-04-2016 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 SRM_RS04035 54ab199fc6985aa8aa3d7164dab4b1b9 479 SUPERFAMILY SSF52413 350 462 7.19E-24 T 22-04-2016 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 SRM_RS04035 54ab199fc6985aa8aa3d7164dab4b1b9 479 SUPERFAMILY SSF48179 244 338 1.6E-25 T 22-04-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 SRM_RS04035 54ab199fc6985aa8aa3d7164dab4b1b9 479 PANTHER PTHR11374:SF4 42 471 2.0E-157 T 22-04-2016 SRM_RS04035 54ab199fc6985aa8aa3d7164dab4b1b9 479 Pfam PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain 245 336 4.0E-26 T 22-04-2016 IPR014026 UDP-glucose/GDP-mannose dehydrogenase, dimerisation GO:0016616|GO:0051287|GO:0055114 SRM_RS04035 54ab199fc6985aa8aa3d7164dab4b1b9 479 Gene3D G3DSA:3.40.50.720 38 265 4.3E-53 T 22-04-2016 IPR016040 NAD(P)-binding domain SRM_RS04035 54ab199fc6985aa8aa3d7164dab4b1b9 479 SUPERFAMILY SSF51735 46 238 8.85E-37 T 22-04-2016 IPR016040 NAD(P)-binding domain SRM_RS07415 dba162440cfd261b19518cf55a7aef11 80 Gene3D G3DSA:3.10.20.30 10 80 9.4E-20 T 22-04-2016 IPR012675 Beta-grasp domain SRM_RS07415 dba162440cfd261b19518cf55a7aef11 80 PANTHER PTHR34472 6 80 6.1E-17 T 22-04-2016 SRM_RS07415 dba162440cfd261b19518cf55a7aef11 80 SUPERFAMILY SSF54285 10 80 8.97E-13 T 22-04-2016 IPR016155 Molybdopterin synthase/thiamin biosynthesis sulphur carrier, beta-grasp SRM_RS07415 dba162440cfd261b19518cf55a7aef11 80 TIGRFAM TIGR01683 thiS: thiamine biosynthesis protein ThiS 11 80 2.8E-15 T 22-04-2016 IPR010035 ThiS, thiamine-biosynthesis SRM_RS07415 dba162440cfd261b19518cf55a7aef11 80 Pfam PF02597 ThiS family 12 80 2.2E-11 T 22-04-2016 IPR003749 ThiamineS/Molybdopterin converting factor subunit 1 SRM_RS11845 a70babdbb4afe7a8d3cf32289d38baaa 382 PANTHER PTHR12526:SF336 1 373 3.4E-139 T 22-04-2016 SRM_RS11845 a70babdbb4afe7a8d3cf32289d38baaa 382 Pfam PF13439 Glycosyltransferase Family 4 11 180 1.6E-27 T 22-04-2016 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain SRM_RS11845 a70babdbb4afe7a8d3cf32289d38baaa 382 PANTHER PTHR12526 1 373 3.4E-139 T 22-04-2016 SRM_RS11845 a70babdbb4afe7a8d3cf32289d38baaa 382 SUPERFAMILY SSF53756 6 374 1.49E-90 T 22-04-2016 SRM_RS11845 a70babdbb4afe7a8d3cf32289d38baaa 382 TIGRFAM TIGR03999 thiol_BshA: N-acetyl-alpha-D-glucosaminyl L-malate synthase BshA 1 373 7.2E-172 T 22-04-2016 IPR023881 N-acetyl-alpha-D-glucosaminyl L-malate synthase BshA GO:0016757|GO:0071793 SRM_RS11845 a70babdbb4afe7a8d3cf32289d38baaa 382 Pfam PF00534 Glycosyl transferases group 1 186 352 7.9E-44 T 22-04-2016 IPR001296 Glycosyl transferase, family 1 SRM_RS11845 a70babdbb4afe7a8d3cf32289d38baaa 382 Gene3D G3DSA:3.40.50.2000 168 352 1.0E-39 T 22-04-2016 SRM_RS13710 e79318a8069994a8573ad2e266513a7a 226 Gene3D G3DSA:3.40.50.300 4 225 1.2E-63 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SRM_RS13710 e79318a8069994a8573ad2e266513a7a 226 PANTHER PTHR24220 8 225 7.4E-73 T 22-04-2016 SRM_RS13710 e79318a8069994a8573ad2e266513a7a 226 SMART SM00382 31 213 4.8E-12 T 22-04-2016 IPR003593 AAA+ ATPase domain SRM_RS13710 e79318a8069994a8573ad2e266513a7a 226 Pfam PF00005 ABC transporter 23 163 1.2E-33 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 SRM_RS13710 e79318a8069994a8573ad2e266513a7a 226 ProSitePatterns PS00211 ABC transporters family signature. 136 150 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 SRM_RS13710 e79318a8069994a8573ad2e266513a7a 226 SUPERFAMILY SSF52540 7 225 1.09E-58 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SRM_RS13810 60c990deabeaa2263cb43fd3158f2f8d 142 Pfam PF05495 CHY zinc finger 51 124 2.6E-11 T 22-04-2016 IPR008913 Zinc finger, CHY-type GO:0008270 SRM_RS13810 60c990deabeaa2263cb43fd3158f2f8d 142 PANTHER PTHR28082:SF1 53 139 2.6E-28 T 22-04-2016 SRM_RS13810 60c990deabeaa2263cb43fd3158f2f8d 142 SUPERFAMILY SSF161219 42 127 6.15E-18 T 22-04-2016 SRM_RS13810 60c990deabeaa2263cb43fd3158f2f8d 142 PANTHER PTHR28082 53 139 2.6E-28 T 22-04-2016 SRM_RS12660 cd95f369e7c51fe34c35eea510af2d88 100 PANTHER PTHR34477 8 91 8.5E-39 T 22-04-2016 SRM_RS12660 cd95f369e7c51fe34c35eea510af2d88 100 PANTHER PTHR34477:SF1 8 91 8.5E-39 T 22-04-2016 SRM_RS12660 cd95f369e7c51fe34c35eea510af2d88 100 Pfam PF01541 GIY-YIG catalytic domain 15 84 1.4E-18 T 22-04-2016 IPR000305 GIY-YIG nuclease superfamily SRM_RS12660 cd95f369e7c51fe34c35eea510af2d88 100 SUPERFAMILY SSF82771 15 85 9.81E-16 T 22-04-2016 IPR000305 GIY-YIG nuclease superfamily SRM_RS14390 78621be8bacbab05047cee1ed6dc23ca 273 Pfam PF00813 FliP family 74 266 2.0E-78 T 22-04-2016 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 SRM_RS14390 78621be8bacbab05047cee1ed6dc23ca 273 PANTHER PTHR30587 62 272 9.1E-112 T 22-04-2016 SRM_RS14390 78621be8bacbab05047cee1ed6dc23ca 273 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 170 182 1.1E-23 T 22-04-2016 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 SRM_RS14390 78621be8bacbab05047cee1ed6dc23ca 273 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 142 156 1.1E-23 T 22-04-2016 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 SRM_RS14390 78621be8bacbab05047cee1ed6dc23ca 273 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 130 142 1.1E-23 T 22-04-2016 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 SRM_RS14390 78621be8bacbab05047cee1ed6dc23ca 273 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 260 270 1.1E-23 T 22-04-2016 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 SRM_RS14390 78621be8bacbab05047cee1ed6dc23ca 273 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 192 204 1.1E-23 T 22-04-2016 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 SRM_RS14390 78621be8bacbab05047cee1ed6dc23ca 273 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 70 79 1.1E-23 T 22-04-2016 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 SRM_RS14390 78621be8bacbab05047cee1ed6dc23ca 273 ProSitePatterns PS01060 Flagella transport protein fliP family signature 1. 199 214 - T 22-04-2016 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 SRM_RS14390 78621be8bacbab05047cee1ed6dc23ca 273 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 220 241 5.8E-64 T 22-04-2016 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 SRM_RS14390 78621be8bacbab05047cee1ed6dc23ca 273 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 244 269 5.8E-64 T 22-04-2016 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 SRM_RS14390 78621be8bacbab05047cee1ed6dc23ca 273 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 111 130 5.8E-64 T 22-04-2016 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 SRM_RS14390 78621be8bacbab05047cee1ed6dc23ca 273 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 91 111 5.8E-64 T 22-04-2016 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 SRM_RS14390 78621be8bacbab05047cee1ed6dc23ca 273 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 199 219 5.8E-64 T 22-04-2016 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 SRM_RS14390 78621be8bacbab05047cee1ed6dc23ca 273 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 72 91 5.8E-64 T 22-04-2016 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 SRM_RS14390 78621be8bacbab05047cee1ed6dc23ca 273 PANTHER PTHR30587:SF0 62 272 9.1E-112 T 22-04-2016 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 SRM_RS14390 78621be8bacbab05047cee1ed6dc23ca 273 TIGRFAM TIGR01103 fliP: flagellar biosynthetic protein FliP 74 269 1.4E-85 T 22-04-2016 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 SRM_RS13325 f757401694fcb2a00eba88825d0dd2d8 270 SUPERFAMILY SSF54506 1 268 2.86E-81 T 22-04-2016 SRM_RS13325 f757401694fcb2a00eba88825d0dd2d8 270 PANTHER PTHR13774 1 268 4.2E-111 T 22-04-2016 SRM_RS13325 f757401694fcb2a00eba88825d0dd2d8 270 TIGRFAM TIGR00654 PhzF_family: phenazine biosynthesis protein, PhzF family 3 103 1.9E-27 T 22-04-2016 IPR003719 Phenazine biosynthesis PhzF protein GO:0003824|GO:0009058 KEGG: 00520+5.1.-.-|KEGG: 00960+5.1.-.- SRM_RS13325 f757401694fcb2a00eba88825d0dd2d8 270 Gene3D G3DSA:3.10.310.10 128 258 6.7E-41 T 22-04-2016 SRM_RS13325 f757401694fcb2a00eba88825d0dd2d8 270 Pfam PF02567 Phenazine biosynthesis-like protein 8 266 1.8E-68 T 22-04-2016 IPR003719 Phenazine biosynthesis PhzF protein GO:0003824|GO:0009058 KEGG: 00520+5.1.-.-|KEGG: 00960+5.1.-.- SRM_RS13325 f757401694fcb2a00eba88825d0dd2d8 270 Gene3D G3DSA:3.10.310.10 2 127 6.7E-50 T 22-04-2016 SRM_RS13325 f757401694fcb2a00eba88825d0dd2d8 270 PIRSF PIRSF016184 1 270 3.6E-59 T 22-04-2016 IPR003719 Phenazine biosynthesis PhzF protein GO:0003824|GO:0009058 KEGG: 00520+5.1.-.-|KEGG: 00960+5.1.-.- SRM_RS13325 f757401694fcb2a00eba88825d0dd2d8 270 PANTHER PTHR13774:SF17 1 268 4.2E-111 T 22-04-2016 SRM_RS11175 c6fc025eeee9634f6fe26762b5729d07 145 Gene3D G3DSA:2.60.40.790 4 145 1.0E-47 T 22-04-2016 IPR008978 HSP20-like chaperone SRM_RS11175 c6fc025eeee9634f6fe26762b5729d07 145 PANTHER PTHR11527 9 145 4.5E-37 T 22-04-2016 IPR031107 Small heat shock protein HSP20 SRM_RS11175 c6fc025eeee9634f6fe26762b5729d07 145 PANTHER PTHR11527:SF118 9 145 4.5E-37 T 22-04-2016 SRM_RS11175 c6fc025eeee9634f6fe26762b5729d07 145 SUPERFAMILY SSF49764 24 144 7.48E-41 T 22-04-2016 IPR008978 HSP20-like chaperone SRM_RS11175 c6fc025eeee9634f6fe26762b5729d07 145 Pfam PF00011 Hsp20/alpha crystallin family 46 145 4.0E-29 T 22-04-2016 IPR002068 Alpha crystallin/Hsp20 domain SRM_RS13295 c16e9e159630e328e387f1e88d40a68b 239 SUPERFAMILY SSF141488 56 133 6.54E-12 T 22-04-2016 IPR018660 C-type lysozyme, inhibitor SRM_RS13295 c16e9e159630e328e387f1e88d40a68b 239 Pfam PF09864 Membrane-bound lysozyme-inhibitor of c-type lysozyme 82 123 9.6E-7 T 22-04-2016 IPR018660 C-type lysozyme, inhibitor SRM_RS09050 2620acea475b76a98c477de580128876 202 Pfam PF00475 Imidazoleglycerol-phosphate dehydratase 38 181 3.2E-64 T 22-04-2016 IPR000807 Imidazoleglycerol-phosphate dehydratase GO:0000105|GO:0004424 KEGG: 00340+4.2.1.19|UniPathway: UPA00031 SRM_RS09050 2620acea475b76a98c477de580128876 202 ProSitePatterns PS00955 Imidazoleglycerol-phosphate dehydratase signature 2. 163 175 - T 22-04-2016 IPR020565 Imidazoleglycerol-phosphate dehydratase, conserved site GO:0000105|GO:0004424 KEGG: 00340+4.2.1.19|UniPathway: UPA00031 SRM_RS09050 2620acea475b76a98c477de580128876 202 Gene3D G3DSA:3.30.230.40 9 95 5.8E-37 T 22-04-2016 SRM_RS09050 2620acea475b76a98c477de580128876 202 SUPERFAMILY SSF54211 9 92 1.52E-32 T 22-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold SRM_RS09050 2620acea475b76a98c477de580128876 202 Hamap MF_00076 Imidazoleglycerol-phosphate dehydratase [hisB]. 9 201 40.202 T 22-04-2016 IPR000807 Imidazoleglycerol-phosphate dehydratase GO:0000105|GO:0004424 KEGG: 00340+4.2.1.19|UniPathway: UPA00031 SRM_RS09050 2620acea475b76a98c477de580128876 202 SUPERFAMILY SSF54211 95 186 2.4E-33 T 22-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold SRM_RS09050 2620acea475b76a98c477de580128876 202 Gene3D G3DSA:3.30.230.40 97 201 1.2E-31 T 22-04-2016 SRM_RS06235 7ab500ee4bdab1726ac8ec7348bdc7a8 286 Gene3D G3DSA:3.40.250.10 4 141 9.4E-38 T 22-04-2016 IPR001763 Rhodanese-like domain SRM_RS06235 7ab500ee4bdab1726ac8ec7348bdc7a8 286 PANTHER PTHR11364:SF10 8 282 5.4E-133 T 22-04-2016 SRM_RS06235 7ab500ee4bdab1726ac8ec7348bdc7a8 286 SUPERFAMILY SSF52821 4 140 3.27E-34 T 22-04-2016 IPR001763 Rhodanese-like domain SRM_RS06235 7ab500ee4bdab1726ac8ec7348bdc7a8 286 Pfam PF00581 Rhodanese-like domain 12 121 1.5E-16 T 22-04-2016 IPR001763 Rhodanese-like domain SRM_RS06235 7ab500ee4bdab1726ac8ec7348bdc7a8 286 Pfam PF00581 Rhodanese-like domain 153 270 9.6E-20 T 22-04-2016 IPR001763 Rhodanese-like domain SRM_RS06235 7ab500ee4bdab1726ac8ec7348bdc7a8 286 Gene3D G3DSA:3.40.250.10 154 280 2.3E-41 T 22-04-2016 IPR001763 Rhodanese-like domain SRM_RS06235 7ab500ee4bdab1726ac8ec7348bdc7a8 286 SUPERFAMILY SSF52821 153 280 1.01E-38 T 22-04-2016 IPR001763 Rhodanese-like domain SRM_RS06235 7ab500ee4bdab1726ac8ec7348bdc7a8 286 PANTHER PTHR11364 8 282 5.4E-133 T 22-04-2016 SRM_RS06235 7ab500ee4bdab1726ac8ec7348bdc7a8 286 SMART SM00450 11 125 1.8E-14 T 22-04-2016 IPR001763 Rhodanese-like domain SRM_RS06235 7ab500ee4bdab1726ac8ec7348bdc7a8 286 SMART SM00450 149 275 1.1E-23 T 22-04-2016 IPR001763 Rhodanese-like domain SRM_RS06235 7ab500ee4bdab1726ac8ec7348bdc7a8 286 ProSitePatterns PS00683 Rhodanese C-terminal signature. 259 269 - T 22-04-2016 IPR001307 Thiosulphate sulfurtransferase, conserved site GO:0004792 KEGG: 00920+2.8.1.1|MetaCyc: PWY-5350 SRM_RS03770 d2e5dde954e46325d0f3eaae7da013c6 389 SUPERFAMILY SSF53756 20 387 2.73E-68 T 22-04-2016 SRM_RS03770 d2e5dde954e46325d0f3eaae7da013c6 389 PANTHER PTHR12526 61 386 1.5E-52 T 22-04-2016 SRM_RS03770 d2e5dde954e46325d0f3eaae7da013c6 389 PANTHER PTHR12526 24 43 1.5E-52 T 22-04-2016 SRM_RS03770 d2e5dde954e46325d0f3eaae7da013c6 389 Pfam PF13439 Glycosyltransferase Family 4 20 197 4.6E-17 T 22-04-2016 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain SRM_RS03770 d2e5dde954e46325d0f3eaae7da013c6 389 Gene3D G3DSA:3.40.50.2000 213 350 1.9E-26 T 22-04-2016 SRM_RS03770 d2e5dde954e46325d0f3eaae7da013c6 389 Pfam PF00534 Glycosyl transferases group 1 213 349 3.0E-29 T 22-04-2016 IPR001296 Glycosyl transferase, family 1 SRM_RS07140 966d5384a56e9485d3b7201839ca26e1 148 Gene3D G3DSA:3.30.420.10 2 146 3.8E-52 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 SRM_RS07140 966d5384a56e9485d3b7201839ca26e1 148 Pfam PF00075 RNase H 2 144 6.1E-42 T 22-04-2016 IPR002156 Ribonuclease H domain GO:0003676|GO:0004523 SRM_RS07140 966d5384a56e9485d3b7201839ca26e1 148 PANTHER PTHR10642 2 146 3.5E-48 T 22-04-2016 SRM_RS07140 966d5384a56e9485d3b7201839ca26e1 148 Hamap MF_00042 Ribonuclease H [rnhA]. 1 147 28.541 T 22-04-2016 IPR022892 Ribonuclease H GO:0004523 SRM_RS07140 966d5384a56e9485d3b7201839ca26e1 148 SUPERFAMILY SSF53098 1 146 4.55E-50 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 SRM_RS09015 f0a4cf098ee52c035e5789cc8510feef 227 Hamap MF_00097 Thiamine-phosphate synthase [thiE]. 17 219 26.845 T 22-04-2016 IPR003733 Thiamine phosphate synthase GO:0004789|GO:0009228 KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357|UniPathway: UPA00060 SRM_RS09015 f0a4cf098ee52c035e5789cc8510feef 227 SUPERFAMILY SSF51391 19 218 6.93E-59 T 22-04-2016 IPR022998 Thiamin phosphate synthase superfamily KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357|UniPathway: UPA00060 SRM_RS09015 f0a4cf098ee52c035e5789cc8510feef 227 TIGRFAM TIGR00693 thiE: thiamine-phosphate diphosphorylase 20 213 2.8E-55 T 22-04-2016 IPR003733 Thiamine phosphate synthase GO:0004789|GO:0009228 KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357|UniPathway: UPA00060 SRM_RS09015 f0a4cf098ee52c035e5789cc8510feef 227 Gene3D G3DSA:3.20.20.70 12 220 1.0E-65 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 SRM_RS09015 f0a4cf098ee52c035e5789cc8510feef 227 Pfam PF02581 Thiamine monophosphate synthase/TENI 22 201 4.9E-55 T 22-04-2016 IPR003733 Thiamine phosphate synthase GO:0004789|GO:0009228 KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357|UniPathway: UPA00060 SRM_RS09015 f0a4cf098ee52c035e5789cc8510feef 227 PANTHER PTHR20857 6 219 6.2E-60 T 22-04-2016 SRM_RS09015 f0a4cf098ee52c035e5789cc8510feef 227 PANTHER PTHR20857:SF15 6 219 6.2E-60 T 22-04-2016 SRM_RS05730 b5a5f7c9231b4bb87db2dbb45245a8c6 362 SUPERFAMILY SSF56935 25 340 2.75E-10 T 22-04-2016 SRM_RS05730 b5a5f7c9231b4bb87db2dbb45245a8c6 362 Gene3D G3DSA:2.40.160.10 33 325 2.2E-6 T 22-04-2016 IPR023614 Porin domain SRM_RS08025 3e5e3ec5e5e52d7f257577b1d118e6a8 376 Pfam PF13378 Enolase C-terminal domain-like 160 353 2.6E-26 T 22-04-2016 IPR029065 Enolase C-terminal domain-like SRM_RS08025 3e5e3ec5e5e52d7f257577b1d118e6a8 376 SMART SM00922 157 248 1.4E-14 T 22-04-2016 IPR013342 Mandelate racemase/muconate lactonizing enzyme, C-terminal SRM_RS08025 3e5e3ec5e5e52d7f257577b1d118e6a8 376 ProSitePatterns PS00909 Mandelate racemase / muconate lactonizing enzyme family signature 2. 200 231 - T 22-04-2016 IPR018110 Mandelate racemase/muconate lactonizing enzyme, conserved site GO:0009063 SRM_RS08025 3e5e3ec5e5e52d7f257577b1d118e6a8 376 PANTHER PTHR13794:SF8 18 353 6.0E-69 T 22-04-2016 IPR010197 o-succinylbenzoate synthase, MenC type 2 GO:0009234|GO:0016829 KEGG: 00010+4.2.1.11|KEGG: 00130+4.2.1.113|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-5837|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|UniPathway: UPA00079|UniPathway: UPA01057 SRM_RS08025 3e5e3ec5e5e52d7f257577b1d118e6a8 376 SUPERFAMILY SSF54826 12 137 1.57E-17 T 22-04-2016 IPR029017 Enolase N-terminal domain-like KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 SRM_RS08025 3e5e3ec5e5e52d7f257577b1d118e6a8 376 Hamap MF_00470 o-succinylbenzoate synthase [menC]. 16 354 23.202 T 22-04-2016 IPR010196 o-succinylbenzoate synthase, MenC type1 GO:0000287|GO:0009234|GO:0016836 KEGG: 00010+4.2.1.11|KEGG: 00130+4.2.1.113|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-5837|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|UniPathway: UPA00079|UniPathway: UPA01057 SRM_RS08025 3e5e3ec5e5e52d7f257577b1d118e6a8 376 SUPERFAMILY SSF51604 143 354 3.54E-47 T 22-04-2016 IPR029065 Enolase C-terminal domain-like SRM_RS08025 3e5e3ec5e5e52d7f257577b1d118e6a8 376 PANTHER PTHR13794 18 353 6.0E-69 T 22-04-2016 IPR001354 Mandelate racemase/muconate lactonizing enzyme/methylaspartate ammonia-lyase GO:0003824|GO:0008152 SRM_RS08025 3e5e3ec5e5e52d7f257577b1d118e6a8 376 Gene3D G3DSA:3.20.20.120 134 353 3.8E-49 T 22-04-2016 IPR029065 Enolase C-terminal domain-like SRM_RS08025 3e5e3ec5e5e52d7f257577b1d118e6a8 376 TIGRFAM TIGR01927 menC_gamma/gm+: o-succinylbenzoate synthase 19 328 1.2E-54 T 22-04-2016 SRM_RS08025 3e5e3ec5e5e52d7f257577b1d118e6a8 376 Pfam PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain 25 81 8.3E-6 T 22-04-2016 IPR013341 Mandelate racemase/muconate lactonizing enzyme, N-terminal domain SRM_RS08025 3e5e3ec5e5e52d7f257577b1d118e6a8 376 Gene3D G3DSA:3.30.390.10 16 133 3.2E-29 T 22-04-2016 IPR029017 Enolase N-terminal domain-like KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 SRM_RS15550 10974e49402dffb6ac94d8fdee5aba9c 275 ProSitePatterns PS00194 Thioredoxin family active site. 162 180 - T 22-04-2016 IPR017937 Thioredoxin, conserved site GO:0045454 SRM_RS15550 10974e49402dffb6ac94d8fdee5aba9c 275 SUPERFAMILY SSF52833 136 273 3.57E-41 T 22-04-2016 IPR012336 Thioredoxin-like fold SRM_RS15550 10974e49402dffb6ac94d8fdee5aba9c 275 PANTHER PTHR10681:SF104 99 274 9.7E-35 T 22-04-2016 SRM_RS15550 10974e49402dffb6ac94d8fdee5aba9c 275 PANTHER PTHR10681 99 274 9.7E-35 T 22-04-2016 SRM_RS15550 10974e49402dffb6ac94d8fdee5aba9c 275 Pfam PF00578 AhpC/TSA family 136 252 6.5E-28 T 22-04-2016 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15 SRM_RS15550 10974e49402dffb6ac94d8fdee5aba9c 275 Gene3D G3DSA:3.40.30.10 107 273 1.6E-49 T 22-04-2016 IPR012336 Thioredoxin-like fold SRM_RS11010 da1156fad6f14ebedaf252e1b9ba5b3c 283 Gene3D G3DSA:3.60.110.10 1 271 5.3E-71 T 22-04-2016 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 SRM_RS11010 da1156fad6f14ebedaf252e1b9ba5b3c 283 SUPERFAMILY SSF56317 1 271 9.55E-69 T 22-04-2016 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 SRM_RS11010 da1156fad6f14ebedaf252e1b9ba5b3c 283 Pfam PF00795 Carbon-nitrogen hydrolase 2 255 2.1E-49 T 22-04-2016 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 SRM_RS11005 d2a77fd54253bbb2c43c8fc89eead277 143 Gene3D G3DSA:3.30.70.1070 89 123 4.4E-4 T 22-04-2016 IPR007730 Sporulation-related domain GO:0042834 SRM_RS11005 d2a77fd54253bbb2c43c8fc89eead277 143 Pfam PF05036 Sporulation related domain 93 131 6.0E-6 T 22-04-2016 IPR007730 Sporulation-related domain GO:0042834 SRM_RS12415 ee17730202c80c7bc9df33f314a6db81 434 Gene3D G3DSA:3.30.470.20 254 422 1.1E-40 T 22-04-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 SRM_RS12415 ee17730202c80c7bc9df33f314a6db81 434 Pfam PF07478 D-ala D-ala ligase C-terminus 174 399 2.7E-49 T 22-04-2016 IPR011095 D-alanine--D-alanine ligase, C-terminal GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 SRM_RS12415 ee17730202c80c7bc9df33f314a6db81 434 PANTHER PTHR23132:SF8 22 302 2.6E-96 T 22-04-2016 SRM_RS12415 ee17730202c80c7bc9df33f314a6db81 434 PANTHER PTHR23132:SF8 322 418 2.6E-96 T 22-04-2016 SRM_RS12415 ee17730202c80c7bc9df33f314a6db81 434 ProSitePatterns PS00844 D-alanine--D-alanine ligase signature 2. 347 376 - T 22-04-2016 IPR000291 D-alanine--D-alanine ligase/VANA/B/C, conserved site KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 SRM_RS12415 ee17730202c80c7bc9df33f314a6db81 434 SUPERFAMILY SSF56059 166 402 7.74E-46 T 22-04-2016 SRM_RS12415 ee17730202c80c7bc9df33f314a6db81 434 ProSitePatterns PS00843 D-alanine--D-alanine ligase signature 1. 133 144 - T 22-04-2016 IPR000291 D-alanine--D-alanine ligase/VANA/B/C, conserved site KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 SRM_RS12415 ee17730202c80c7bc9df33f314a6db81 434 Gene3D G3DSA:3.30.1490.20 176 253 3.7E-23 T 22-04-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 SRM_RS12415 ee17730202c80c7bc9df33f314a6db81 434 PIRSF PIRSF039102 19 410 5.7E-84 T 22-04-2016 IPR005905 D-alanine--D-alanine ligase GO:0005737|GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 SRM_RS12415 ee17730202c80c7bc9df33f314a6db81 434 PANTHER PTHR23132 22 302 2.6E-96 T 22-04-2016 SRM_RS12415 ee17730202c80c7bc9df33f314a6db81 434 PANTHER PTHR23132 322 418 2.6E-96 T 22-04-2016 SRM_RS12415 ee17730202c80c7bc9df33f314a6db81 434 Hamap MF_00047 D-alanine--D-alanine ligase [ddl]. 22 402 33.849 T 22-04-2016 IPR005905 D-alanine--D-alanine ligase GO:0005737|GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 SRM_RS12415 ee17730202c80c7bc9df33f314a6db81 434 Pfam PF01820 D-ala D-ala ligase N-terminus 23 155 6.0E-24 T 22-04-2016 IPR011127 D-alanine--D-alanine ligase, N-terminal domain KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 SRM_RS12415 ee17730202c80c7bc9df33f314a6db81 434 SUPERFAMILY SSF52440 23 165 1.82E-26 T 22-04-2016 IPR016185 Pre-ATP-grasp domain SRM_RS12415 ee17730202c80c7bc9df33f314a6db81 434 Gene3D G3DSA:3.40.50.20 22 154 6.4E-23 T 22-04-2016 IPR016185 Pre-ATP-grasp domain SRM_RS07815 afa886b1820809a8efa641e3dfd7521f 607 Pfam PF01432 Peptidase family M3 197 571 1.3E-41 T 22-04-2016 IPR001567 Peptidase M3A/M3B GO:0004222|GO:0006508 SRM_RS07815 afa886b1820809a8efa641e3dfd7521f 607 PANTHER PTHR11804 139 591 3.1E-57 T 22-04-2016 SRM_RS07815 afa886b1820809a8efa641e3dfd7521f 607 TIGRFAM TIGR02290 M3_fam_3: oligoendopeptidase, pepF/M3 family 12 587 2.0E-176 T 22-04-2016 IPR011977 Peptidase M3B, oligoendopeptidase-related clade 3 SRM_RS07815 afa886b1820809a8efa641e3dfd7521f 607 PANTHER PTHR11804:SF8 139 591 3.1E-57 T 22-04-2016 SRM_RS07815 afa886b1820809a8efa641e3dfd7521f 607 Pfam PF08439 Oligopeptidase F 113 181 6.0E-18 T 22-04-2016 IPR013647 Oligopeptidase F, N-terminal domain SRM_RS07815 afa886b1820809a8efa641e3dfd7521f 607 Gene3D G3DSA:3.40.390.10 362 416 1.3E-5 T 22-04-2016 IPR024079 Metallopeptidase, catalytic domain GO:0008237 SRM_RS07815 afa886b1820809a8efa641e3dfd7521f 607 SUPERFAMILY SSF55486 7 572 1.55E-103 T 22-04-2016 SRM_RS15970 0f86f625a17d51643889850f3042a289 261 PANTHER PTHR11783 24 242 1.5E-18 T 22-04-2016 SRM_RS15970 0f86f625a17d51643889850f3042a289 261 Pfam PF00685 Sulfotransferase domain 26 252 8.5E-28 T 22-04-2016 IPR000863 Sulfotransferase domain GO:0008146 SRM_RS15970 0f86f625a17d51643889850f3042a289 261 SUPERFAMILY SSF52540 23 253 9.49E-43 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SRM_RS15970 0f86f625a17d51643889850f3042a289 261 PANTHER PTHR11783:SF15 24 242 1.5E-18 T 22-04-2016 SRM_RS15970 0f86f625a17d51643889850f3042a289 261 Gene3D G3DSA:3.40.50.300 23 251 2.5E-45 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SRM_RS03735 fd2724bd490c4b894c5a8ed22abd659f 370 Pfam PF04101 Glycosyltransferase family 28 C-terminal domain 193 355 4.6E-36 T 22-04-2016 IPR007235 Glycosyl transferase, family 28, C-terminal GO:0016758 KEGG: 00052+2.4.1.22|KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 SRM_RS03735 fd2724bd490c4b894c5a8ed22abd659f 370 PANTHER PTHR21015 8 368 7.5E-125 T 22-04-2016 SRM_RS03735 fd2724bd490c4b894c5a8ed22abd659f 370 Gene3D G3DSA:3.40.50.2000 204 344 2.1E-5 T 22-04-2016 SRM_RS03735 fd2724bd490c4b894c5a8ed22abd659f 370 PANTHER PTHR21015:SF22 8 368 7.5E-125 T 22-04-2016 SRM_RS03735 fd2724bd490c4b894c5a8ed22abd659f 370 TIGRFAM TIGR01133 murG: undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase 4 358 8.4E-88 T 22-04-2016 IPR006009 N-acetylglucosaminyltransferase, MurG GO:0009252|GO:0050511 KEGG: 00052+2.4.1.22|KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 SRM_RS03735 fd2724bd490c4b894c5a8ed22abd659f 370 Pfam PF03033 Glycosyltransferase family 28 N-terminal domain 8 146 9.1E-35 T 22-04-2016 IPR004276 Glycosyltransferase family 28, N-terminal domain GO:0005975|GO:0016758|GO:0030259 KEGG: 00052+2.4.1.22|KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 SRM_RS03735 fd2724bd490c4b894c5a8ed22abd659f 370 SUPERFAMILY SSF53756 7 365 3.35E-103 T 22-04-2016 SRM_RS03735 fd2724bd490c4b894c5a8ed22abd659f 370 Gene3D G3DSA:3.40.50.2000 5 203 1.4E-60 T 22-04-2016 SRM_RS03735 fd2724bd490c4b894c5a8ed22abd659f 370 Hamap MF_00033 UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [murG]. 8 364 32.894 T 22-04-2016 IPR006009 N-acetylglucosaminyltransferase, MurG GO:0009252|GO:0050511 KEGG: 00052+2.4.1.22|KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 SRM_RS04095 7da65b906178d2ad2005f72d40e1c5db 94 Pfam PF01850 PIN domain 2 86 7.9E-7 T 22-04-2016 IPR002716 PIN domain SRM_RS04095 7da65b906178d2ad2005f72d40e1c5db 94 SUPERFAMILY SSF88723 1 89 6.28E-9 T 22-04-2016 IPR029060 PIN domain-like SRM_RS12440 5ef11e8ab26bf39f153d9cd81c792d17 472 Gene3D G3DSA:3.40.120.10 185 263 2.0E-20 T 22-04-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 SRM_RS12440 5ef11e8ab26bf39f153d9cd81c792d17 472 PANTHER PTHR22573 5 465 6.9E-157 T 22-04-2016 SRM_RS12440 5ef11e8ab26bf39f153d9cd81c792d17 472 Gene3D G3DSA:3.30.310.50 387 468 1.4E-21 T 22-04-2016 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 SRM_RS12440 5ef11e8ab26bf39f153d9cd81c792d17 472 PANTHER PTHR22573:SF49 5 465 6.9E-157 T 22-04-2016 SRM_RS12440 5ef11e8ab26bf39f153d9cd81c792d17 472 Pfam PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain 408 467 7.1E-13 T 22-04-2016 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 SRM_RS12440 5ef11e8ab26bf39f153d9cd81c792d17 472 SUPERFAMILY SSF53738 251 386 7.06E-31 T 22-04-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 SRM_RS12440 5ef11e8ab26bf39f153d9cd81c792d17 472 ProSitePatterns PS00710 Phosphoglucomutase and phosphomannomutase phosphoserine signature. 99 108 - T 22-04-2016 IPR016066 Alpha-D-phosphohexomutase, conserved site GO:0000287 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 SRM_RS12440 5ef11e8ab26bf39f153d9cd81c792d17 472 SUPERFAMILY SSF53738 4 191 2.16E-43 T 22-04-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 SRM_RS12440 5ef11e8ab26bf39f153d9cd81c792d17 472 SUPERFAMILY SSF55957 373 468 6.41E-21 T 22-04-2016 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 SRM_RS12440 5ef11e8ab26bf39f153d9cd81c792d17 472 Pfam PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I 7 135 3.2E-38 T 22-04-2016 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 SRM_RS12440 5ef11e8ab26bf39f153d9cd81c792d17 472 Gene3D G3DSA:3.40.120.10 265 380 1.3E-31 T 22-04-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 SRM_RS12440 5ef11e8ab26bf39f153d9cd81c792d17 472 Pfam PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II 167 263 1.7E-21 T 22-04-2016 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II GO:0005975 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 SRM_RS12440 5ef11e8ab26bf39f153d9cd81c792d17 472 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 98 112 1.1E-10 T 22-04-2016 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 SRM_RS12440 5ef11e8ab26bf39f153d9cd81c792d17 472 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 243 258 1.1E-10 T 22-04-2016 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 SRM_RS12440 5ef11e8ab26bf39f153d9cd81c792d17 472 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 184 203 1.1E-10 T 22-04-2016 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 SRM_RS12440 5ef11e8ab26bf39f153d9cd81c792d17 472 Pfam PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III 268 379 5.4E-26 T 22-04-2016 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 SRM_RS12440 5ef11e8ab26bf39f153d9cd81c792d17 472 Gene3D G3DSA:3.40.120.10 4 183 2.0E-44 T 22-04-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 SRM_RS13445 e6f9032fbfe4a95cc23d76efcbdd20d2 326 SUPERFAMILY SSF51430 2 309 1.57E-104 T 22-04-2016 IPR023210 NADP-dependent oxidoreductase domain SRM_RS13445 e6f9032fbfe4a95cc23d76efcbdd20d2 326 Gene3D G3DSA:3.20.20.100 2 319 8.6E-120 T 22-04-2016 IPR023210 NADP-dependent oxidoreductase domain SRM_RS13445 e6f9032fbfe4a95cc23d76efcbdd20d2 326 PANTHER PTHR11732 1 326 1.9E-158 T 22-04-2016 IPR001395 Aldo/keto reductase/potassium channel subunit beta SRM_RS13445 e6f9032fbfe4a95cc23d76efcbdd20d2 326 PANTHER PTHR11732:SF225 1 326 1.9E-158 T 22-04-2016 SRM_RS13445 e6f9032fbfe4a95cc23d76efcbdd20d2 326 Pfam PF00248 Aldo/keto reductase family 16 307 2.3E-80 T 22-04-2016 IPR023210 NADP-dependent oxidoreductase domain SRM_RS13225 d510d2f170f1bfeac6dc7b3621d9484f 581 SMART SM00028 398 431 2.5 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 SRM_RS13225 d510d2f170f1bfeac6dc7b3621d9484f 581 SMART SM00028 432 465 0.09 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 SRM_RS13225 d510d2f170f1bfeac6dc7b3621d9484f 581 SUPERFAMILY SSF48452 102 296 9.29E-9 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 SRM_RS13225 d510d2f170f1bfeac6dc7b3621d9484f 581 SUPERFAMILY SSF48452 510 563 5.06E-18 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 SRM_RS13225 d510d2f170f1bfeac6dc7b3621d9484f 581 SUPERFAMILY SSF48452 408 482 5.06E-18 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 SRM_RS13225 d510d2f170f1bfeac6dc7b3621d9484f 581 Pfam PF13181 Tetratricopeptide repeat 398 431 0.0025 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 SRM_RS13225 d510d2f170f1bfeac6dc7b3621d9484f 581 PANTHER PTHR23083 520 559 2.3E-17 T 22-04-2016 SRM_RS13225 d510d2f170f1bfeac6dc7b3621d9484f 581 PANTHER PTHR23083 101 170 2.3E-17 T 22-04-2016 SRM_RS13225 d510d2f170f1bfeac6dc7b3621d9484f 581 PANTHER PTHR23083 411 481 2.3E-17 T 22-04-2016 SRM_RS13225 d510d2f170f1bfeac6dc7b3621d9484f 581 PANTHER PTHR23083 264 317 2.3E-17 T 22-04-2016 SRM_RS13225 d510d2f170f1bfeac6dc7b3621d9484f 581 Pfam PF13414 TPR repeat 446 480 2.0E-9 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 SRM_RS13225 d510d2f170f1bfeac6dc7b3621d9484f 581 Gene3D G3DSA:1.25.40.10 398 481 1.8E-30 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 SRM_RS13225 d510d2f170f1bfeac6dc7b3621d9484f 581 Gene3D G3DSA:1.25.40.10 98 304 1.8E-30 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 SRM_RS13225 d510d2f170f1bfeac6dc7b3621d9484f 581 Gene3D G3DSA:1.25.40.10 520 563 1.8E-30 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 SRM_RS09390 beec21ba84cd46db38be57cc22a6a3db 170 PANTHER PTHR11609:SF5 1 170 1.0E-87 T 22-04-2016 SRM_RS09390 beec21ba84cd46db38be57cc22a6a3db 170 SMART SM01001 7 156 2.2E-92 T 22-04-2016 IPR000031 Phosphoribosylaminoimidazole carboxylase PurE domain GO:0006189 SRM_RS09390 beec21ba84cd46db38be57cc22a6a3db 170 Gene3D G3DSA:3.40.50.7700 3 164 1.6E-72 T 22-04-2016 IPR000031 Phosphoribosylaminoimidazole carboxylase PurE domain GO:0006189 SRM_RS09390 beec21ba84cd46db38be57cc22a6a3db 170 PIRSF PIRSF001338 4 167 3.5E-70 T 22-04-2016 IPR024694 N5-carboxyaminoimidazole ribonucleotide mutase PurE GO:0006189|GO:0034023 KEGG: 00230+5.4.99.18|MetaCyc: PWY-6123|MetaCyc: PWY-7234|UniPathway: UPA00074 SRM_RS09390 beec21ba84cd46db38be57cc22a6a3db 170 TIGRFAM TIGR01162 purE: phosphoribosylaminoimidazole carboxylase, catalytic subunit 9 163 2.2E-64 T 22-04-2016 IPR000031 Phosphoribosylaminoimidazole carboxylase PurE domain GO:0006189 SRM_RS09390 beec21ba84cd46db38be57cc22a6a3db 170 SUPERFAMILY SSF52255 8 165 1.01E-64 T 22-04-2016 IPR000031 Phosphoribosylaminoimidazole carboxylase PurE domain GO:0006189 SRM_RS09390 beec21ba84cd46db38be57cc22a6a3db 170 PANTHER PTHR11609 1 170 1.0E-87 T 22-04-2016 SRM_RS09390 beec21ba84cd46db38be57cc22a6a3db 170 Hamap MF_01929 N5-carboxyaminoimidazole ribonucleotide mutase [purE]. 9 160 33.146 T 22-04-2016 IPR000031 Phosphoribosylaminoimidazole carboxylase PurE domain GO:0006189 SRM_RS09390 beec21ba84cd46db38be57cc22a6a3db 170 Pfam PF00731 AIR carboxylase 9 154 1.7E-64 T 22-04-2016 IPR000031 Phosphoribosylaminoimidazole carboxylase PurE domain GO:0006189 SRM_RS06075 a95477e4d5c5780e88d39e0ecca8a7dc 386 Gene3D G3DSA:3.50.30.20 12 154 1.8E-53 T 22-04-2016 IPR002474 Carbamoyl-phosphate synthase, small subunit N-terminal domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 SRM_RS06075 a95477e4d5c5780e88d39e0ecca8a7dc 386 Pfam PF00117 Glutamine amidotransferase class-I 187 364 1.1E-43 T 22-04-2016 IPR017926 Glutamine amidotransferase Reactome: REACT_1698 SRM_RS06075 a95477e4d5c5780e88d39e0ecca8a7dc 386 PRINTS PR00096 Glutamine amidotransferase superfamily signature 227 236 7.0E-12 T 22-04-2016 SRM_RS06075 a95477e4d5c5780e88d39e0ecca8a7dc 386 PRINTS PR00096 Glutamine amidotransferase superfamily signature 341 354 7.0E-12 T 22-04-2016 SRM_RS06075 a95477e4d5c5780e88d39e0ecca8a7dc 386 PRINTS PR00096 Glutamine amidotransferase superfamily signature 255 266 7.0E-12 T 22-04-2016 SRM_RS06075 a95477e4d5c5780e88d39e0ecca8a7dc 386 Gene3D G3DSA:3.40.50.880 160 368 6.6E-66 T 22-04-2016 IPR029062 Class I glutamine amidotransferase-like SRM_RS06075 a95477e4d5c5780e88d39e0ecca8a7dc 386 TIGRFAM TIGR01368 CPSaseIIsmall: carbamoyl-phosphate synthase, small subunit 13 367 3.8E-141 T 22-04-2016 IPR006274 Carbamoyl-phosphate synthase, small subunit GO:0004088|GO:0006207|GO:0006541 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 SRM_RS06075 a95477e4d5c5780e88d39e0ecca8a7dc 386 SUPERFAMILY SSF52317 159 368 6.27E-58 T 22-04-2016 IPR029062 Class I glutamine amidotransferase-like SRM_RS06075 a95477e4d5c5780e88d39e0ecca8a7dc 386 SUPERFAMILY SSF52021 12 158 2.48E-51 T 22-04-2016 IPR002474 Carbamoyl-phosphate synthase, small subunit N-terminal domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 SRM_RS06075 a95477e4d5c5780e88d39e0ecca8a7dc 386 SMART SM01097 11 141 2.9E-78 T 22-04-2016 IPR002474 Carbamoyl-phosphate synthase, small subunit N-terminal domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 SRM_RS06075 a95477e4d5c5780e88d39e0ecca8a7dc 386 PANTHER PTHR11405 11 371 8.4E-190 T 22-04-2016 SRM_RS06075 a95477e4d5c5780e88d39e0ecca8a7dc 386 Hamap MF_01209 Carbamoyl-phosphate synthase small chain [carA]. 11 370 45.912 T 22-04-2016 IPR006274 Carbamoyl-phosphate synthase, small subunit GO:0004088|GO:0006207|GO:0006541 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 SRM_RS06075 a95477e4d5c5780e88d39e0ecca8a7dc 386 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 255 271 2.3E-35 T 22-04-2016 SRM_RS06075 a95477e4d5c5780e88d39e0ecca8a7dc 386 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 272 289 2.3E-35 T 22-04-2016 SRM_RS06075 a95477e4d5c5780e88d39e0ecca8a7dc 386 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 185 199 2.3E-35 T 22-04-2016 SRM_RS06075 a95477e4d5c5780e88d39e0ecca8a7dc 386 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 224 238 2.3E-35 T 22-04-2016 SRM_RS06075 a95477e4d5c5780e88d39e0ecca8a7dc 386 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 297 308 2.3E-35 T 22-04-2016 SRM_RS06075 a95477e4d5c5780e88d39e0ecca8a7dc 386 Pfam PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain 13 140 5.1E-48 T 22-04-2016 IPR002474 Carbamoyl-phosphate synthase, small subunit N-terminal domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 SRM_RS06075 a95477e4d5c5780e88d39e0ecca8a7dc 386 PRINTS PR00097 Anthranilate synthase component II signature 227 236 2.8E-6 T 22-04-2016 SRM_RS06075 a95477e4d5c5780e88d39e0ecca8a7dc 386 PRINTS PR00097 Anthranilate synthase component II signature 255 266 2.8E-6 T 22-04-2016 SRM_RS06075 a95477e4d5c5780e88d39e0ecca8a7dc 386 PRINTS PR00097 Anthranilate synthase component II signature 341 354 2.8E-6 T 22-04-2016 SRM_RS14445 f968c2947b9fea764068501a07103974 932 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 680 875 5.1E-53 T 22-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 SRM_RS14445 f968c2947b9fea764068501a07103974 932 PANTHER PTHR32089 419 502 1.1E-117 T 22-04-2016 SRM_RS14445 f968c2947b9fea764068501a07103974 932 PANTHER PTHR32089 583 879 1.1E-117 T 22-04-2016 SRM_RS14445 f968c2947b9fea764068501a07103974 932 SUPERFAMILY SSF58104 568 878 2.49E-77 T 22-04-2016 SRM_RS14445 f968c2947b9fea764068501a07103974 932 Gene3D G3DSA:3.30.450.20 299 359 4.8E-5 T 22-04-2016 SRM_RS14445 f968c2947b9fea764068501a07103974 932 Gene3D G3DSA:3.30.450.20 395 444 4.8E-5 T 22-04-2016 SRM_RS14445 f968c2947b9fea764068501a07103974 932 Pfam PF00672 HAMP domain 555 597 2.1E-6 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 SRM_RS14445 f968c2947b9fea764068501a07103974 932 Pfam PF00672 HAMP domain 450 514 2.9E-16 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 SRM_RS14445 f968c2947b9fea764068501a07103974 932 SMART SM00304 548 600 2.7E-8 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 SRM_RS14445 f968c2947b9fea764068501a07103974 932 SMART SM00304 670 726 10.0 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 SRM_RS14445 f968c2947b9fea764068501a07103974 932 SMART SM00304 468 520 1.2E-11 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 SRM_RS14445 f968c2947b9fea764068501a07103974 932 Pfam PF02743 Cache domain 68 430 2.4E-12 T 22-04-2016 IPR033479 Double Cache domain 1 SRM_RS14445 f968c2947b9fea764068501a07103974 932 SUPERFAMILY SSF158472 468 516 1.44E-9 T 22-04-2016 SRM_RS14445 f968c2947b9fea764068501a07103974 932 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 742 771 1.1E-6 T 22-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 SRM_RS14445 f968c2947b9fea764068501a07103974 932 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 629 658 1.1E-6 T 22-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 SRM_RS14445 f968c2947b9fea764068501a07103974 932 Gene3D G3DSA:1.10.287.950 629 845 3.0E-57 T 22-04-2016 SRM_RS14445 f968c2947b9fea764068501a07103974 932 SMART SM00283 615 876 2.7E-77 T 22-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 SRM_RS14445 f968c2947b9fea764068501a07103974 932 Gene3D G3DSA:3.30.450.40 217 298 2.2E-4 T 22-04-2016 IPR029016 GAF domain-like SRM_RS02150 00eaef367381d490a2fc9cacd2129c0a 114 Pfam PF11953 Domain of unknown function (DUF3470) 66 109 1.5E-12 T 22-04-2016 IPR022569 Ferredoxin, C-terminal SRM_RS02150 00eaef367381d490a2fc9cacd2129c0a 114 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 40 51 - T 22-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site SRM_RS02150 00eaef367381d490a2fc9cacd2129c0a 114 PANTHER PTHR11938:SF101 1 114 2.6E-30 T 22-04-2016 SRM_RS02150 00eaef367381d490a2fc9cacd2129c0a 114 PANTHER PTHR11938 1 114 2.6E-30 T 22-04-2016 SRM_RS02150 00eaef367381d490a2fc9cacd2129c0a 114 Gene3D G3DSA:3.30.70.20 3 81 1.6E-20 T 22-04-2016 SRM_RS02150 00eaef367381d490a2fc9cacd2129c0a 114 PRINTS PR00354 7Fe ferredoxin signature 35 52 3.1E-17 T 22-04-2016 IPR000813 7Fe ferredoxin GO:0009055 SRM_RS02150 00eaef367381d490a2fc9cacd2129c0a 114 PRINTS PR00354 7Fe ferredoxin signature 9 19 3.1E-17 T 22-04-2016 IPR000813 7Fe ferredoxin GO:0009055 SRM_RS02150 00eaef367381d490a2fc9cacd2129c0a 114 PRINTS PR00354 7Fe ferredoxin signature 19 29 3.1E-17 T 22-04-2016 IPR000813 7Fe ferredoxin GO:0009055 SRM_RS02150 00eaef367381d490a2fc9cacd2129c0a 114 SUPERFAMILY SSF54862 1 80 6.12E-23 T 22-04-2016 SRM_RS02150 00eaef367381d490a2fc9cacd2129c0a 114 Pfam PF00037 4Fe-4S binding domain 35 56 1.5E-7 T 22-04-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain SRM_RS04065 b8d075638e6b6bdd296bb3c927922b03 104 Pfam PF01909 Nucleotidyltransferase domain 19 87 4.5E-10 T 22-04-2016 IPR002934 Polymerase, nucleotidyl transferase domain GO:0016779 SRM_RS04065 b8d075638e6b6bdd296bb3c927922b03 104 SUPERFAMILY SSF81301 4 98 4.58E-19 T 22-04-2016 SRM_RS04065 b8d075638e6b6bdd296bb3c927922b03 104 Gene3D G3DSA:3.30.460.10 6 99 4.9E-20 T 22-04-2016 SRM_RS04065 b8d075638e6b6bdd296bb3c927922b03 104 PANTHER PTHR33571 1 103 3.6E-21 T 22-04-2016 SRM_RS12620 66cbd26ce50e5c57e2ff210d4994fe3d 208 SUPERFAMILY SSF103088 87 204 1.57E-22 T 22-04-2016 IPR006665 OmpA-like domain SRM_RS12620 66cbd26ce50e5c57e2ff210d4994fe3d 208 PANTHER PTHR30329:SF4 93 207 3.7E-19 T 22-04-2016 SRM_RS12620 66cbd26ce50e5c57e2ff210d4994fe3d 208 PANTHER PTHR30329 93 207 3.7E-19 T 22-04-2016 SRM_RS12620 66cbd26ce50e5c57e2ff210d4994fe3d 208 Pfam PF00691 OmpA family 94 197 6.2E-13 T 22-04-2016 IPR006665 OmpA-like domain SRM_RS12620 66cbd26ce50e5c57e2ff210d4994fe3d 208 Gene3D G3DSA:3.30.1330.60 86 204 2.6E-24 T 22-04-2016 IPR006665 OmpA-like domain SRM_RS08485 83147e300d7a9ba9721895c317e16215 499 PANTHER PTHR22773 2 493 1.8E-147 T 22-04-2016 SRM_RS08485 83147e300d7a9ba9721895c317e16215 499 PANTHER PTHR22773:SF41 2 493 1.8E-147 T 22-04-2016 SRM_RS08485 83147e300d7a9ba9721895c317e16215 499 Hamap MF_00445 NAD(P)H-quinone oxidoreductase subunit 2, chloroplastic [ndhB]. 12 483 17.627 T 22-04-2016 IPR010096 NAD(P)H-quinone oxidoreductase, subunit N/subunit 2 GO:0008137|GO:0042773|GO:0055114 SRM_RS08485 83147e300d7a9ba9721895c317e16215 499 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 106 126 2.0E-6 T 22-04-2016 SRM_RS08485 83147e300d7a9ba9721895c317e16215 499 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 77 102 2.0E-6 T 22-04-2016 SRM_RS08485 83147e300d7a9ba9721895c317e16215 499 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 220 241 2.0E-6 T 22-04-2016 SRM_RS08485 83147e300d7a9ba9721895c317e16215 499 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 417 436 2.0E-6 T 22-04-2016 SRM_RS08485 83147e300d7a9ba9721895c317e16215 499 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 310 322 2.0E-6 T 22-04-2016 SRM_RS08485 83147e300d7a9ba9721895c317e16215 499 Pfam PF00361 Proton-conducting membrane transporter 129 423 4.6E-75 T 22-04-2016 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit Reactome: REACT_6305 SRM_RS08485 83147e300d7a9ba9721895c317e16215 499 TIGRFAM TIGR01770 NDH_I_N: proton-translocating NADH-quinone oxidoreductase, chain N 61 477 9.2E-124 T 22-04-2016 IPR010096 NAD(P)H-quinone oxidoreductase, subunit N/subunit 2 GO:0008137|GO:0042773|GO:0055114 SRM_RS08110 90aef1f22061b876873a11941d80d1f0 244 SUPERFAMILY SSF74653 153 228 2.62E-18 T 22-04-2016 SRM_RS08110 90aef1f22061b876873a11941d80d1f0 244 PANTHER PTHR33446:SF2 69 241 5.1E-21 T 22-04-2016 SRM_RS08110 90aef1f22061b876873a11941d80d1f0 244 Pfam PF03544 Gram-negative bacterial TonB protein C-terminal 155 229 1.0E-17 T 22-04-2016 IPR006260 TonB, C-terminal GO:0006810 SRM_RS08110 90aef1f22061b876873a11941d80d1f0 244 Gene3D G3DSA:3.30.1150.10 154 230 4.8E-12 T 22-04-2016 SRM_RS08110 90aef1f22061b876873a11941d80d1f0 244 PANTHER PTHR33446 69 241 5.1E-21 T 22-04-2016 SRM_RS08110 90aef1f22061b876873a11941d80d1f0 244 TIGRFAM TIGR01352 tonB_Cterm: TonB family C-terminal domain 156 230 4.7E-15 T 22-04-2016 IPR006260 TonB, C-terminal GO:0006810 SRM_RS04890 d828c4825d16911b6035e4c27703bbf0 67 PANTHER PTHR34137 1 64 4.7E-15 T 22-04-2016 SRM_RS04890 d828c4825d16911b6035e4c27703bbf0 67 PIRSF PIRSF006488 2 67 8.5E-19 T 22-04-2016 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 SRM_RS04890 d828c4825d16911b6035e4c27703bbf0 67 SUPERFAMILY SSF116842 6 64 1.16E-17 T 22-04-2016 SRM_RS04890 d828c4825d16911b6035e4c27703bbf0 67 Hamap MF_00337 Exodeoxyribonuclease 7 small subunit [xseB]. 11 67 12.115 T 22-04-2016 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 SRM_RS04890 d828c4825d16911b6035e4c27703bbf0 67 Gene3D G3DSA:1.10.287.1040 7 65 8.6E-21 T 22-04-2016 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 SRM_RS04890 d828c4825d16911b6035e4c27703bbf0 67 Pfam PF02609 Exonuclease VII small subunit 12 62 4.5E-19 T 22-04-2016 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 SRM_RS04890 d828c4825d16911b6035e4c27703bbf0 67 ProDom PD028235 EXONUCLEASE SMALL SUBUNIT VII EXODEOXYRIBONUCLEASE HYDROLASE NUCLEASE PROBABLE VII SIMILAR 9 52 5.0E-5 T 22-04-2016 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 SRM_RS04890 d828c4825d16911b6035e4c27703bbf0 67 TIGRFAM TIGR01280 xseB: exodeoxyribonuclease VII, small subunit 11 64 3.8E-20 T 22-04-2016 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 SRM_RS04460 302e66dddbc6dcbaf454b351bd63b54a 819 PANTHER PTHR11361:SF14 337 626 4.1E-201 T 22-04-2016 IPR005747 Endonuclease MutS2 GO:0004519|GO:0016887|GO:0030983|GO:0045910 SRM_RS04460 302e66dddbc6dcbaf454b351bd63b54a 819 PANTHER PTHR11361:SF14 30 320 4.1E-201 T 22-04-2016 IPR005747 Endonuclease MutS2 GO:0004519|GO:0016887|GO:0030983|GO:0045910 SRM_RS04460 302e66dddbc6dcbaf454b351bd63b54a 819 SMART SM00991 605 667 5.7E-6 T 22-04-2016 IPR000738 WHEP-TRS domain GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 SRM_RS04460 302e66dddbc6dcbaf454b351bd63b54a 819 Gene3D G3DSA:3.40.50.300 293 539 6.2E-58 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SRM_RS04460 302e66dddbc6dcbaf454b351bd63b54a 819 SMART SM00463 742 819 4.3E-9 T 22-04-2016 IPR002625 Smr domain SRM_RS04460 302e66dddbc6dcbaf454b351bd63b54a 819 TIGRFAM TIGR01069 mutS2: MutS2 family protein 11 819 2.9E-188 T 22-04-2016 IPR005747 Endonuclease MutS2 GO:0004519|GO:0016887|GO:0030983|GO:0045910 SRM_RS04460 302e66dddbc6dcbaf454b351bd63b54a 819 SUPERFAMILY SSF160443 744 817 2.09E-8 T 22-04-2016 IPR002625 Smr domain SRM_RS04460 302e66dddbc6dcbaf454b351bd63b54a 819 Pfam PF00488 MutS domain V 356 536 9.7E-30 T 22-04-2016 IPR000432 DNA mismatch repair protein MutS, C-terminal GO:0005524|GO:0006298|GO:0030983 SRM_RS04460 302e66dddbc6dcbaf454b351bd63b54a 819 SUPERFAMILY SSF52540 293 539 4.56E-37 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SRM_RS04460 302e66dddbc6dcbaf454b351bd63b54a 819 PANTHER PTHR11361 337 626 4.1E-201 T 22-04-2016 SRM_RS04460 302e66dddbc6dcbaf454b351bd63b54a 819 PANTHER PTHR11361 30 320 4.1E-201 T 22-04-2016 SRM_RS04460 302e66dddbc6dcbaf454b351bd63b54a 819 PIRSF PIRSF005814 4 819 5.0E-223 T 22-04-2016 IPR005747 Endonuclease MutS2 GO:0004519|GO:0016887|GO:0030983|GO:0045910 SRM_RS04460 302e66dddbc6dcbaf454b351bd63b54a 819 SUPERFAMILY SSF48334 26 289 1.83E-27 T 22-04-2016 IPR007696 DNA mismatch repair protein MutS, core GO:0005524|GO:0006298|GO:0030983 SRM_RS04460 302e66dddbc6dcbaf454b351bd63b54a 819 Hamap MF_00092 Endonuclease MutS2 [mutS2]. 5 819 19.282 T 22-04-2016 IPR005747 Endonuclease MutS2 GO:0004519|GO:0016887|GO:0030983|GO:0045910 SRM_RS04460 302e66dddbc6dcbaf454b351bd63b54a 819 Pfam PF01713 Smr domain 745 819 6.5E-18 T 22-04-2016 IPR002625 Smr domain SRM_RS04460 302e66dddbc6dcbaf454b351bd63b54a 819 SMART SM00534 353 538 7.2E-60 T 22-04-2016 IPR000432 DNA mismatch repair protein MutS, C-terminal GO:0005524|GO:0006298|GO:0030983 SRM_RS04460 302e66dddbc6dcbaf454b351bd63b54a 819 SMART SM00533 12 316 5.6E-15 T 22-04-2016 IPR007696 DNA mismatch repair protein MutS, core GO:0005524|GO:0006298|GO:0030983 SRM_RS06475 8494fff91b27b68649518cf5a1e52079 208 SUPERFAMILY SSF50447 4 207 2.12E-68 T 22-04-2016 IPR009000 Translation protein, beta-barrel domain SRM_RS06475 8494fff91b27b68649518cf5a1e52079 208 ProSitePatterns PS00474 Ribosomal protein L3 signature. 102 125 - T 22-04-2016 IPR019926 Ribosomal protein L3, conserved site SRM_RS06475 8494fff91b27b68649518cf5a1e52079 208 Gene3D G3DSA:2.40.30.10 160 207 4.8E-10 T 22-04-2016 SRM_RS06475 8494fff91b27b68649518cf5a1e52079 208 Gene3D G3DSA:2.40.30.10 4 33 4.8E-10 T 22-04-2016 SRM_RS06475 8494fff91b27b68649518cf5a1e52079 208 TIGRFAM TIGR03625 L3_bact: 50S ribosomal protein uL3 4 204 2.7E-77 T 22-04-2016 IPR019927 Ribosomal protein L3, bacterial/organelle-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 SRM_RS06475 8494fff91b27b68649518cf5a1e52079 208 Pfam PF00297 Ribosomal protein L3 93 184 3.0E-19 T 22-04-2016 IPR000597 Ribosomal protein L3 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SRM_RS06475 8494fff91b27b68649518cf5a1e52079 208 Hamap MF_01325_B 50S ribosomal protein L3 [rplC]. 2 208 34.681 T 22-04-2016 IPR019927 Ribosomal protein L3, bacterial/organelle-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 SRM_RS06475 8494fff91b27b68649518cf5a1e52079 208 PANTHER PTHR11229 4 205 3.1E-95 T 22-04-2016 IPR019927 Ribosomal protein L3, bacterial/organelle-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 SRM_RS06475 8494fff91b27b68649518cf5a1e52079 208 Gene3D G3DSA:4.10.960.10 85 159 3.9E-29 T 22-04-2016 SRM_RS07840 3704e99cf36e88a881331f6e6845deba 875 SUPERFAMILY SSF81923 4 149 5.62E-26 T 22-04-2016 IPR004176 Clp, N-terminal GO:0019538 SRM_RS07840 3704e99cf36e88a881331f6e6845deba 875 ProSitePatterns PS00870 Chaperonins clpA/B signature 1. 313 325 - T 22-04-2016 IPR018368 ClpA/B, conserved site 1 GO:0005524 SRM_RS07840 3704e99cf36e88a881331f6e6845deba 875 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 604 622 1.37E-40 T 22-04-2016 IPR001270 ClpA/B family GO:0005524 SRM_RS07840 3704e99cf36e88a881331f6e6845deba 875 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 559 577 1.37E-40 T 22-04-2016 IPR001270 ClpA/B family GO:0005524 SRM_RS07840 3704e99cf36e88a881331f6e6845deba 875 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 633 651 1.37E-40 T 22-04-2016 IPR001270 ClpA/B family GO:0005524 SRM_RS07840 3704e99cf36e88a881331f6e6845deba 875 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 666 680 1.37E-40 T 22-04-2016 IPR001270 ClpA/B family GO:0005524 SRM_RS07840 3704e99cf36e88a881331f6e6845deba 875 Pfam PF02861 Clp amino terminal domain, pathogenicity island component 95 144 5.8E-10 T 22-04-2016 IPR004176 Clp, N-terminal GO:0019538 SRM_RS07840 3704e99cf36e88a881331f6e6845deba 875 Pfam PF02861 Clp amino terminal domain, pathogenicity island component 18 65 1.2E-15 T 22-04-2016 IPR004176 Clp, N-terminal GO:0019538 SRM_RS07840 3704e99cf36e88a881331f6e6845deba 875 SMART SM00382 555 735 1.3E-8 T 22-04-2016 IPR003593 AAA+ ATPase domain SRM_RS07840 3704e99cf36e88a881331f6e6845deba 875 SMART SM00382 218 363 2.2E-12 T 22-04-2016 IPR003593 AAA+ ATPase domain SRM_RS07840 3704e99cf36e88a881331f6e6845deba 875 Gene3D G3DSA:3.40.50.300 181 359 6.3E-46 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SRM_RS07840 3704e99cf36e88a881331f6e6845deba 875 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 734 813 1.7E-24 T 22-04-2016 IPR019489 Clp ATPase, C-terminal SRM_RS07840 3704e99cf36e88a881331f6e6845deba 875 SUPERFAMILY SSF52540 179 483 5.4E-76 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SRM_RS07840 3704e99cf36e88a881331f6e6845deba 875 Pfam PF02151 UvrB/uvrC motif 435 469 4.2E-6 T 22-04-2016 IPR001943 UVR domain GO:0005515 SRM_RS07840 3704e99cf36e88a881331f6e6845deba 875 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 223 324 1.2E-12 T 22-04-2016 IPR003959 ATPase, AAA-type, core GO:0005524 SRM_RS07840 3704e99cf36e88a881331f6e6845deba 875 Gene3D G3DSA:1.10.1780.10 1 147 1.9E-37 T 22-04-2016 IPR004176 Clp, N-terminal GO:0019538 SRM_RS07840 3704e99cf36e88a881331f6e6845deba 875 SMART SM01086 734 825 1.4E-32 T 22-04-2016 IPR019489 Clp ATPase, C-terminal SRM_RS07840 3704e99cf36e88a881331f6e6845deba 875 ProSitePatterns PS00871 Chaperonins clpA/B signature 2. 589 607 - T 22-04-2016 IPR028299 ClpA/B, conserved site 2 SRM_RS07840 3704e99cf36e88a881331f6e6845deba 875 Gene3D G3DSA:1.10.8.60 746 834 4.3E-28 T 22-04-2016 SRM_RS07840 3704e99cf36e88a881331f6e6845deba 875 Gene3D G3DSA:3.40.50.300 509 681 1.5E-54 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SRM_RS07840 3704e99cf36e88a881331f6e6845deba 875 Gene3D G3DSA:3.40.50.300 717 745 1.5E-54 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SRM_RS07840 3704e99cf36e88a881331f6e6845deba 875 SUPERFAMILY SSF52540 504 817 1.2E-77 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SRM_RS07840 3704e99cf36e88a881331f6e6845deba 875 Pfam PF07724 AAA domain (Cdc48 subfamily) 554 727 1.1E-52 T 22-04-2016 IPR003959 ATPase, AAA-type, core GO:0005524 SRM_RS07840 3704e99cf36e88a881331f6e6845deba 875 PANTHER PTHR11638 161 844 0.0 T 22-04-2016 SRM_RS07840 3704e99cf36e88a881331f6e6845deba 875 PANTHER PTHR11638 1 141 0.0 T 22-04-2016 SRM_RS07840 3704e99cf36e88a881331f6e6845deba 875 PANTHER PTHR11638:SF18 161 844 0.0 T 22-04-2016 SRM_RS07840 3704e99cf36e88a881331f6e6845deba 875 PANTHER PTHR11638:SF18 1 141 0.0 T 22-04-2016 SRM_RS07840 3704e99cf36e88a881331f6e6845deba 875 Gene3D G3DSA:1.10.8.60 363 446 9.9E-33 T 22-04-2016 SRM_RS15220 833b43c4c758601ce177b9cab5a6fcd1 386 Gene3D G3DSA:3.30.300.10 130 232 2.4E-40 T 22-04-2016 SRM_RS15220 833b43c4c758601ce177b9cab5a6fcd1 386 TIGRFAM TIGR01034 metK: methionine adenosyltransferase 4 379 2.4E-166 T 22-04-2016 IPR002133 S-adenosylmethionine synthetase GO:0004478|GO:0005524|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: REACT_13433|UniPathway: UPA00315 SRM_RS15220 833b43c4c758601ce177b9cab5a6fcd1 386 SUPERFAMILY SSF55973 110 232 4.71E-46 T 22-04-2016 IPR022636 S-adenosylmethionine synthetase superfamily GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: REACT_13433|UniPathway: UPA00315 SRM_RS15220 833b43c4c758601ce177b9cab5a6fcd1 386 SUPERFAMILY SSF55973 2 108 1.22E-42 T 22-04-2016 IPR022636 S-adenosylmethionine synthetase superfamily GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: REACT_13433|UniPathway: UPA00315 SRM_RS15220 833b43c4c758601ce177b9cab5a6fcd1 386 ProSitePatterns PS00377 S-adenosylmethionine synthase signature 2. 259 267 - T 22-04-2016 IPR022631 S-adenosylmethionine synthetase, conserved site GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: REACT_13433|UniPathway: UPA00315 SRM_RS15220 833b43c4c758601ce177b9cab5a6fcd1 386 Hamap MF_00086 S-adenosylmethionine synthase [metK]. 1 381 52.015 T 22-04-2016 IPR002133 S-adenosylmethionine synthetase GO:0004478|GO:0005524|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: REACT_13433|UniPathway: UPA00315 SRM_RS15220 833b43c4c758601ce177b9cab5a6fcd1 386 PIRSF PIRSF000497 1 382 8.1E-163 T 22-04-2016 IPR002133 S-adenosylmethionine synthetase GO:0004478|GO:0005524|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: REACT_13433|UniPathway: UPA00315 SRM_RS15220 833b43c4c758601ce177b9cab5a6fcd1 386 PANTHER PTHR11964 3 376 9.2E-225 T 22-04-2016 IPR002133 S-adenosylmethionine synthetase GO:0004478|GO:0005524|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: REACT_13433|UniPathway: UPA00315 SRM_RS15220 833b43c4c758601ce177b9cab5a6fcd1 386 Pfam PF00438 S-adenosylmethionine synthetase, N-terminal domain 3 99 2.4E-39 T 22-04-2016 IPR022628 S-adenosylmethionine synthetase, N-terminal GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: REACT_13433|UniPathway: UPA00315 SRM_RS15220 833b43c4c758601ce177b9cab5a6fcd1 386 Gene3D G3DSA:3.30.300.10 244 379 1.3E-64 T 22-04-2016 SRM_RS15220 833b43c4c758601ce177b9cab5a6fcd1 386 ProSitePatterns PS00376 S-adenosylmethionine synthase signature 1. 113 123 - T 22-04-2016 IPR022631 S-adenosylmethionine synthetase, conserved site GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: REACT_13433|UniPathway: UPA00315 SRM_RS15220 833b43c4c758601ce177b9cab5a6fcd1 386 Gene3D G3DSA:3.30.300.10 10 129 1.7E-42 T 22-04-2016 SRM_RS15220 833b43c4c758601ce177b9cab5a6fcd1 386 SUPERFAMILY SSF55973 234 379 2.71E-63 T 22-04-2016 IPR022636 S-adenosylmethionine synthetase superfamily GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: REACT_13433|UniPathway: UPA00315 SRM_RS15220 833b43c4c758601ce177b9cab5a6fcd1 386 Pfam PF02772 S-adenosylmethionine synthetase, central domain 111 231 6.0E-45 T 22-04-2016 IPR022629 S-adenosylmethionine synthetase, central domain GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: REACT_13433|UniPathway: UPA00315 SRM_RS15220 833b43c4c758601ce177b9cab5a6fcd1 386 Pfam PF02773 S-adenosylmethionine synthetase, C-terminal domain 234 369 1.3E-64 T 22-04-2016 IPR022630 S-adenosylmethionine synthetase, C-terminal GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: REACT_13433|UniPathway: UPA00315 SRM_RS07170 0e131f6527ba4224e9c821401a25e6f7 166 PANTHER PTHR33877 1 149 1.1E-57 T 22-04-2016 SRM_RS07170 0e131f6527ba4224e9c821401a25e6f7 166 Pfam PF14279 HNH endonuclease 84 135 1.1E-17 T 22-04-2016 IPR029471 HNH endonuclease 5 SRM_RS07170 0e131f6527ba4224e9c821401a25e6f7 166 SMART SM00507 71 121 6.8E-15 T 22-04-2016 IPR003615 HNH nuclease SRM_RS03955 3d74b5c53f2e589227982ba69402fbb7 408 Gene3D G3DSA:3.90.1150.10 295 406 1.6E-24 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 SRM_RS03955 3d74b5c53f2e589227982ba69402fbb7 408 PANTHER PTHR30244:SF16 29 408 4.4E-134 T 22-04-2016 SRM_RS03955 3d74b5c53f2e589227982ba69402fbb7 408 PIRSF PIRSF000390 34 408 1.2E-92 T 22-04-2016 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase SRM_RS03955 3d74b5c53f2e589227982ba69402fbb7 408 PANTHER PTHR30244 29 408 4.4E-134 T 22-04-2016 SRM_RS03955 3d74b5c53f2e589227982ba69402fbb7 408 Pfam PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family 49 405 1.6E-87 T 22-04-2016 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase SRM_RS03955 3d74b5c53f2e589227982ba69402fbb7 408 Gene3D G3DSA:3.40.640.10 38 294 1.0E-84 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 SRM_RS03955 3d74b5c53f2e589227982ba69402fbb7 408 SUPERFAMILY SSF53383 37 404 7.29E-93 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase SRM_RS03955 3d74b5c53f2e589227982ba69402fbb7 408 TIGRFAM TIGR04181 NHT_00031: aminotransferase, LLPSF_NHT_00031 family 38 397 5.7E-161 T 22-04-2016 IPR026385 Aminotransferase, LLPSF_NHT_00031 family SRM_RS12005 17dfc88ddaa6ed11ffb2121c4cc8d7b3 239 PANTHER PTHR30027 1 233 1.4E-52 T 22-04-2016 SRM_RS12005 17dfc88ddaa6ed11ffb2121c4cc8d7b3 239 SUPERFAMILY SSF75217 74 236 1.52E-37 T 22-04-2016 IPR029028 Alpha/beta knot methyltransferases SRM_RS12005 17dfc88ddaa6ed11ffb2121c4cc8d7b3 239 PANTHER PTHR30027:SF3 1 233 1.4E-52 T 22-04-2016 SRM_RS12005 17dfc88ddaa6ed11ffb2121c4cc8d7b3 239 Gene3D G3DSA:3.40.1280.10 4 235 4.6E-66 T 22-04-2016 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal SRM_RS12005 17dfc88ddaa6ed11ffb2121c4cc8d7b3 239 TIGRFAM TIGR00046 TIGR00046: RNA methyltransferase, RsmE family 5 233 1.2E-36 T 22-04-2016 IPR006700 Ribosomal RNA small subunit methyltransferase E GO:0006364|GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 SRM_RS12005 17dfc88ddaa6ed11ffb2121c4cc8d7b3 239 Pfam PF04452 RNA methyltransferase 18 233 2.5E-53 T 22-04-2016 IPR006700 Ribosomal RNA small subunit methyltransferase E GO:0006364|GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 SRM_RS12005 17dfc88ddaa6ed11ffb2121c4cc8d7b3 239 SUPERFAMILY SSF88697 3 68 1.49E-12 T 22-04-2016 IPR015947 PUA-like domain SRM_RS12005 17dfc88ddaa6ed11ffb2121c4cc8d7b3 239 PIRSF PIRSF015601 1 239 1.4E-50 T 22-04-2016 IPR006700 Ribosomal RNA small subunit methyltransferase E GO:0006364|GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 SRM_RS05165 314d48e09a662ca039e687a99b3b0606 429 Hamap MF_00318 Enolase [eno]. 2 413 44.161 T 22-04-2016 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|Reactome: REACT_474|UniPathway: UPA00109 SRM_RS05165 314d48e09a662ca039e687a99b3b0606 429 PANTHER PTHR11902 1 421 2.0E-246 T 22-04-2016 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|Reactome: REACT_474|UniPathway: UPA00109 SRM_RS05165 314d48e09a662ca039e687a99b3b0606 429 SMART SM01192 139 427 9.8E-212 T 22-04-2016 IPR020810 Enolase, C-terminal TIM barrel domain KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|UniPathway: UPA00109 SRM_RS05165 314d48e09a662ca039e687a99b3b0606 429 SMART SM01193 4 134 5.3E-85 T 22-04-2016 IPR020811 Enolase, N-terminal KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|UniPathway: UPA00109 SRM_RS05165 314d48e09a662ca039e687a99b3b0606 429 Gene3D G3DSA:3.30.390.10 3 126 2.0E-52 T 22-04-2016 IPR029017 Enolase N-terminal domain-like KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 SRM_RS05165 314d48e09a662ca039e687a99b3b0606 429 SUPERFAMILY SSF51604 139 425 8.71E-125 T 22-04-2016 IPR029065 Enolase C-terminal domain-like SRM_RS05165 314d48e09a662ca039e687a99b3b0606 429 PIRSF PIRSF001400 1 426 6.8E-184 T 22-04-2016 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|Reactome: REACT_474|UniPathway: UPA00109 SRM_RS05165 314d48e09a662ca039e687a99b3b0606 429 Pfam PF00113 Enolase, C-terminal TIM barrel domain 141 423 4.3E-126 T 22-04-2016 IPR020810 Enolase, C-terminal TIM barrel domain KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|UniPathway: UPA00109 SRM_RS05165 314d48e09a662ca039e687a99b3b0606 429 SUPERFAMILY SSF54826 3 137 8.19E-54 T 22-04-2016 IPR029017 Enolase N-terminal domain-like KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 SRM_RS05165 314d48e09a662ca039e687a99b3b0606 429 Pfam PF03952 Enolase, N-terminal domain 4 134 2.7E-56 T 22-04-2016 IPR020811 Enolase, N-terminal KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|UniPathway: UPA00109 SRM_RS05165 314d48e09a662ca039e687a99b3b0606 429 ProSitePatterns PS00164 Enolase signature. 336 349 - T 22-04-2016 IPR020809 Enolase, conserved site KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|Reactome: REACT_474|UniPathway: UPA00109 SRM_RS05165 314d48e09a662ca039e687a99b3b0606 429 TIGRFAM TIGR01060 eno: phosphopyruvate hydratase 4 425 3.3E-199 T 22-04-2016 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|Reactome: REACT_474|UniPathway: UPA00109 SRM_RS05165 314d48e09a662ca039e687a99b3b0606 429 Gene3D G3DSA:3.20.20.120 128 425 3.5E-130 T 22-04-2016 IPR029065 Enolase C-terminal domain-like SRM_RS05165 314d48e09a662ca039e687a99b3b0606 429 PRINTS PR00148 Enolase signature 161 174 1.6E-47 T 22-04-2016 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|Reactome: REACT_474|UniPathway: UPA00109 SRM_RS05165 314d48e09a662ca039e687a99b3b0606 429 PRINTS PR00148 Enolase signature 336 350 1.6E-47 T 22-04-2016 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|Reactome: REACT_474|UniPathway: UPA00109 SRM_RS05165 314d48e09a662ca039e687a99b3b0606 429 PRINTS PR00148 Enolase signature 313 324 1.6E-47 T 22-04-2016 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|Reactome: REACT_474|UniPathway: UPA00109 SRM_RS05165 314d48e09a662ca039e687a99b3b0606 429 PRINTS PR00148 Enolase signature 37 51 1.6E-47 T 22-04-2016 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|Reactome: REACT_474|UniPathway: UPA00109 SRM_RS05165 314d48e09a662ca039e687a99b3b0606 429 PRINTS PR00148 Enolase signature 365 382 1.6E-47 T 22-04-2016 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|Reactome: REACT_474|UniPathway: UPA00109 SRM_RS05165 314d48e09a662ca039e687a99b3b0606 429 PRINTS PR00148 Enolase signature 107 123 1.6E-47 T 22-04-2016 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|Reactome: REACT_474|UniPathway: UPA00109 SRM_RS07710 3987cf74a262f3955adad121962adcd9 265 PANTHER PTHR24220 3 243 1.5E-80 T 22-04-2016 SRM_RS07710 3987cf74a262f3955adad121962adcd9 265 SMART SM00382 26 213 2.7E-16 T 22-04-2016 IPR003593 AAA+ ATPase domain SRM_RS07710 3987cf74a262f3955adad121962adcd9 265 SUPERFAMILY SSF52540 2 226 2.05E-58 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SRM_RS07710 3987cf74a262f3955adad121962adcd9 265 Pfam PF00005 ABC transporter 17 165 1.9E-28 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 SRM_RS07710 3987cf74a262f3955adad121962adcd9 265 ProSitePatterns PS00211 ABC transporters family signature. 137 151 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 SRM_RS07710 3987cf74a262f3955adad121962adcd9 265 PANTHER PTHR24220:SF309 3 243 1.5E-80 T 22-04-2016 SRM_RS07710 3987cf74a262f3955adad121962adcd9 265 Gene3D G3DSA:3.40.50.300 3 229 1.8E-59 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SRM_RS11600 2b8a74151cf47e577b9c4365890ea481 317 Gene3D G3DSA:3.40.50.1100 58 159 3.7E-32 T 22-04-2016 SRM_RS11600 2b8a74151cf47e577b9c4365890ea481 317 SUPERFAMILY SSF53686 16 312 3.14E-80 T 22-04-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme SRM_RS11600 2b8a74151cf47e577b9c4365890ea481 317 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 23 302 6.6E-65 T 22-04-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme SRM_RS11600 2b8a74151cf47e577b9c4365890ea481 317 Gene3D G3DSA:3.40.50.1100 166 315 3.3E-65 T 22-04-2016 SRM_RS11600 2b8a74151cf47e577b9c4365890ea481 317 Gene3D G3DSA:3.40.50.1100 15 57 3.3E-65 T 22-04-2016 SRM_RS11600 2b8a74151cf47e577b9c4365890ea481 317 PANTHER PTHR10314 15 316 1.8E-138 T 22-04-2016 SRM_RS11600 2b8a74151cf47e577b9c4365890ea481 317 ProSitePatterns PS00901 Cysteine synthase/cystathionine beta-synthase P-phosphate attachment site. 48 66 - T 22-04-2016 IPR001216 Cysteine synthase/cystathionine beta-synthase, pyridoxal-phosphate attachment site GO:0006535 SRM_RS11600 2b8a74151cf47e577b9c4365890ea481 317 PANTHER PTHR10314:SF91 15 316 1.8E-138 T 22-04-2016 SRM_RS10010 ad5bd216e2a9e0aa0dde37bc11604cfb 786 Gene3D G3DSA:2.40.110.10 256 362 1.6E-24 T 22-04-2016 SRM_RS10010 ad5bd216e2a9e0aa0dde37bc11604cfb 786 PANTHER PTHR10909 68 551 2.6E-122 T 22-04-2016 SRM_RS10010 ad5bd216e2a9e0aa0dde37bc11604cfb 786 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 148 254 1.1E-26 T 22-04-2016 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 SRM_RS10010 ad5bd216e2a9e0aa0dde37bc11604cfb 786 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 372 517 2.3E-36 T 22-04-2016 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 SRM_RS10010 ad5bd216e2a9e0aa0dde37bc11604cfb 786 Gene3D G3DSA:1.20.140.10 363 519 4.3E-55 T 22-04-2016 SRM_RS10010 ad5bd216e2a9e0aa0dde37bc11604cfb 786 PANTHER PTHR10909:SF121 68 551 2.6E-122 T 22-04-2016 SRM_RS10010 ad5bd216e2a9e0aa0dde37bc11604cfb 786 Gene3D G3DSA:1.10.540.10 118 254 3.3E-34 T 22-04-2016 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 SRM_RS10010 ad5bd216e2a9e0aa0dde37bc11604cfb 786 ProSitePatterns PS00073 Acyl-CoA dehydrogenases signature 2. 480 499 - T 22-04-2016 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 SRM_RS10010 ad5bd216e2a9e0aa0dde37bc11604cfb 786 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 257 360 5.9E-23 T 22-04-2016 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0003995|GO:0055114 SRM_RS10010 ad5bd216e2a9e0aa0dde37bc11604cfb 786 SUPERFAMILY SSF56645 140 385 2.75E-57 T 22-04-2016 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain GO:0008152|GO:0016627|GO:0055114 SRM_RS10010 ad5bd216e2a9e0aa0dde37bc11604cfb 786 SUPERFAMILY SSF47203 370 520 2.26E-43 T 22-04-2016 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 SRM_RS01095 35997868b32be05742613d504761b70f 412 SUPERFAMILY SSF52540 1 340 1.49E-33 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SRM_RS01095 35997868b32be05742613d504761b70f 412 PANTHER PTHR32182:SF0 1 351 1.5E-50 T 22-04-2016 IPR001238 DNA-binding, RecF GO:0003697|GO:0005524|GO:0006281 SRM_RS01095 35997868b32be05742613d504761b70f 412 PANTHER PTHR32182 1 351 1.5E-50 T 22-04-2016 SRM_RS01095 35997868b32be05742613d504761b70f 412 TIGRFAM TIGR00611 recf: DNA replication and repair protein RecF 1 352 6.8E-84 T 22-04-2016 IPR001238 DNA-binding, RecF GO:0003697|GO:0005524|GO:0006281 SRM_RS01095 35997868b32be05742613d504761b70f 412 SMART SM00382 22 375 4.5E-4 T 22-04-2016 IPR003593 AAA+ ATPase domain SRM_RS01095 35997868b32be05742613d504761b70f 412 Hamap MF_00365 DNA replication and repair protein RecF [recF]. 1 412 81.216 T 22-04-2016 IPR001238 DNA-binding, RecF GO:0003697|GO:0005524|GO:0006281 SRM_RS01095 35997868b32be05742613d504761b70f 412 Gene3D G3DSA:3.40.50.300 1 168 8.8E-33 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SRM_RS01095 35997868b32be05742613d504761b70f 412 Gene3D G3DSA:3.40.50.300 243 351 8.8E-33 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SRM_RS01095 35997868b32be05742613d504761b70f 412 Pfam PF02463 RecF/RecN/SMC N terminal domain 3 358 1.3E-14 T 22-04-2016 IPR003395 RecF/RecN/SMC, N-terminal SRM_RS15335 771cc676a887ff9efffba01c996b3eae 258 SUPERFAMILY SSF55068 34 190 1.7E-47 T 22-04-2016 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 SRM_RS15335 771cc676a887ff9efffba01c996b3eae 258 Pfam PF01625 Peptide methionine sulfoxide reductase 57 190 7.0E-36 T 22-04-2016 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 SRM_RS15335 771cc676a887ff9efffba01c996b3eae 258 PANTHER PTHR10173:SF6 26 186 6.0E-46 T 22-04-2016 SRM_RS15335 771cc676a887ff9efffba01c996b3eae 258 Gene3D G3DSA:3.30.1060.10 37 188 1.0E-44 T 22-04-2016 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 SRM_RS15335 771cc676a887ff9efffba01c996b3eae 258 PANTHER PTHR10173 26 186 6.0E-46 T 22-04-2016 IPR028427 Peptide methionine sulfoxide reductase GO:0006979|GO:0016671|GO:0030091 SRM_RS13800 da69345f2f244886313ac7b41136a8fb 251 PANTHER PTHR24220 3 239 2.0E-113 T 22-04-2016 SRM_RS13800 da69345f2f244886313ac7b41136a8fb 251 SMART SM00382 26 211 3.3E-16 T 22-04-2016 IPR003593 AAA+ ATPase domain SRM_RS13800 da69345f2f244886313ac7b41136a8fb 251 SUPERFAMILY SSF52540 1 238 1.36E-69 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SRM_RS13800 da69345f2f244886313ac7b41136a8fb 251 Gene3D G3DSA:3.40.50.300 1 238 5.5E-73 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SRM_RS13800 da69345f2f244886313ac7b41136a8fb 251 PANTHER PTHR24220:SF460 3 239 2.0E-113 T 22-04-2016 SRM_RS13800 da69345f2f244886313ac7b41136a8fb 251 Pfam PF00005 ABC transporter 18 162 4.8E-33 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 SRM_RS06385 b5dd51a8d48d74bc616f095d7e26af14 127 Hamap MF_01021 Phosphoribosyl-AMP cyclohydrolase [hisI]. 5 108 31.4 T 22-04-2016 IPR026660 Phosphoribosyl-AMP cyclohydrolase GO:0000105|GO:0004635 KEGG: 00340+3.5.4.19|UniPathway: UPA00031 SRM_RS06385 b5dd51a8d48d74bc616f095d7e26af14 127 SUPERFAMILY SSF141734 6 114 1.96E-47 T 22-04-2016 SRM_RS06385 b5dd51a8d48d74bc616f095d7e26af14 127 PANTHER PTHR21256 5 127 9.0E-54 T 22-04-2016 SRM_RS06385 b5dd51a8d48d74bc616f095d7e26af14 127 Pfam PF01502 Phosphoribosyl-AMP cyclohydrolase 31 104 2.6E-34 T 22-04-2016 IPR002496 Phosphoribosyl-AMP cyclohydrolase domain GO:0000105|GO:0004635 KEGG: 00340+3.5.4.19|UniPathway: UPA00031 SRM_RS06385 b5dd51a8d48d74bc616f095d7e26af14 127 ProDom PD002610 PHOSPHORIBOSYL-AMP BIOSYNTHESIS CYCLOHYDROLASE HYDROLASE HISTIDINE AMINO-ACID PRA-CH PHOSPHORIBOSYL-ATP BIFUNCTIONAL INCLUDES: 54 103 5.0E-16 T 22-04-2016 IPR002496 Phosphoribosyl-AMP cyclohydrolase domain GO:0000105|GO:0004635 KEGG: 00340+3.5.4.19|UniPathway: UPA00031 SRM_RS13165 5197e0f85a7531405758c5bfb614c086 180 PANTHER PTHR30466:SF1 9 164 5.3E-45 T 22-04-2016 SRM_RS13165 5197e0f85a7531405758c5bfb614c086 180 SMART SM00903 13 159 3.8E-49 T 22-04-2016 IPR002563 Flavin reductase like domain GO:0010181 SRM_RS13165 5197e0f85a7531405758c5bfb614c086 180 SUPERFAMILY SSF50475 6 160 1.18E-42 T 22-04-2016 IPR012349 FMN-binding split barrel GO:0010181|GO:0016491|GO:0055114 UniPathway: UPA00647 SRM_RS13165 5197e0f85a7531405758c5bfb614c086 180 Pfam PF01613 Flavin reductase like domain 13 161 9.9E-38 T 22-04-2016 IPR002563 Flavin reductase like domain GO:0010181 SRM_RS13165 5197e0f85a7531405758c5bfb614c086 180 PANTHER PTHR30466 9 164 5.3E-45 T 22-04-2016 SRM_RS13165 5197e0f85a7531405758c5bfb614c086 180 Gene3D G3DSA:2.30.110.10 7 164 1.9E-49 T 22-04-2016 IPR012349 FMN-binding split barrel GO:0010181|GO:0016491|GO:0055114 UniPathway: UPA00647 SRM_RS07650 87424d9615878890a76f0453629b0f44 95 PANTHER PTHR15004:SF0 1 95 6.5E-31 T 22-04-2016 SRM_RS07650 87424d9615878890a76f0453629b0f44 95 TIGRFAM TIGR00135 gatC: aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, C subunit 3 95 4.2E-30 T 22-04-2016 IPR003837 Glu-tRNAGln amidotransferase C subunit GO:0006450 SRM_RS07650 87424d9615878890a76f0453629b0f44 95 Pfam PF02686 Glu-tRNAGln amidotransferase C subunit 19 90 9.4E-21 T 22-04-2016 IPR003837 Glu-tRNAGln amidotransferase C subunit GO:0006450 SRM_RS07650 87424d9615878890a76f0453629b0f44 95 SUPERFAMILY SSF141000 2 93 4.97E-30 T 22-04-2016 IPR003837 Glu-tRNAGln amidotransferase C subunit GO:0006450 SRM_RS07650 87424d9615878890a76f0453629b0f44 95 PANTHER PTHR15004 1 95 6.5E-31 T 22-04-2016 SRM_RS07650 87424d9615878890a76f0453629b0f44 95 Hamap MF_00122 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit C [gatC]. 2 95 25.111 T 22-04-2016 IPR003837 Glu-tRNAGln amidotransferase C subunit GO:0006450 SRM_RS15985 8f782ffbd3910a924484147f688e2516 365 Pfam PF02397 Bacterial sugar transferase 176 359 2.3E-52 T 22-04-2016 IPR003362 Bacterial sugar transferase SRM_RS15985 8f782ffbd3910a924484147f688e2516 365 PANTHER PTHR30576 177 365 8.9E-74 T 22-04-2016 SRM_RS15985 8f782ffbd3910a924484147f688e2516 365 PANTHER PTHR30576:SF0 177 365 8.9E-74 T 22-04-2016 SRM_RS08570 1ef9520ca15101be85b3383b242c7f0a 611 SUPERFAMILY SSF53850 115 558 1.54E-45 T 22-04-2016 SRM_RS08570 1ef9520ca15101be85b3383b242c7f0a 611 Gene3D G3DSA:3.40.190.10 238 489 2.3E-34 T 22-04-2016 SRM_RS08570 1ef9520ca15101be85b3383b242c7f0a 611 Pfam PF13416 Bacterial extracellular solute-binding protein 123 493 1.1E-8 T 22-04-2016 SRM_RS08570 1ef9520ca15101be85b3383b242c7f0a 611 Gene3D G3DSA:3.40.190.10 112 237 1.5E-9 T 22-04-2016 SRM_RS05380 00cf43cbde620a4c00e6c8db81d54f9b 186 PANTHER PTHR18866 31 184 3.7E-19 T 22-04-2016 SRM_RS05380 00cf43cbde620a4c00e6c8db81d54f9b 186 ProSitePatterns PS00188 Biotin-requiring enzymes attachment site. 140 157 - T 22-04-2016 IPR001882 Biotin-binding site SRM_RS05380 00cf43cbde620a4c00e6c8db81d54f9b 186 PANTHER PTHR18866:SF102 31 184 3.7E-19 T 22-04-2016 SRM_RS05380 00cf43cbde620a4c00e6c8db81d54f9b 186 SUPERFAMILY SSF51230 116 184 1.57E-20 T 22-04-2016 IPR011053 Single hybrid motif SRM_RS05380 00cf43cbde620a4c00e6c8db81d54f9b 186 Gene3D G3DSA:2.40.50.100 115 184 1.3E-24 T 22-04-2016 SRM_RS05380 00cf43cbde620a4c00e6c8db81d54f9b 186 Pfam PF00364 Biotin-requiring enzyme 117 183 2.1E-18 T 22-04-2016 IPR000089 Biotin/lipoyl attachment SRM_RS04155 1be63be4773e36b567b3b7703c760f7c 116 Pfam PF13744 Helix-turn-helix domain 26 106 2.6E-24 T 22-04-2016 SRM_RS04155 1be63be4773e36b567b3b7703c760f7c 116 Gene3D G3DSA:1.10.260.40 36 99 4.8E-30 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 SRM_RS04155 1be63be4773e36b567b3b7703c760f7c 116 SUPERFAMILY SSF47413 36 108 5.28E-20 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 SRM_RS04155 1be63be4773e36b567b3b7703c760f7c 116 SMART SM00530 49 105 3.4E-4 T 22-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 SRM_RS12175 7c13cae278c83bcd382ca81d5b09be78 472 Gene3D G3DSA:3.40.1060.10 168 281 1.8E-35 T 22-04-2016 IPR015932 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 2 GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 SRM_RS12175 7c13cae278c83bcd382ca81d5b09be78 472 Gene3D G3DSA:3.30.499.10 328 469 3.9E-54 T 22-04-2016 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 SRM_RS12175 7c13cae278c83bcd382ca81d5b09be78 472 TIGRFAM TIGR00170 leuC: 3-isopropylmalate dehydratase, large subunit 4 467 3.4E-184 T 22-04-2016 IPR004430 3-isopropylmalate dehydratase, large subunit GO:0003861|GO:0009098|GO:0051539 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 SRM_RS12175 7c13cae278c83bcd382ca81d5b09be78 472 ProSitePatterns PS01244 Aconitase family signature 2. 401 414 - T 22-04-2016 IPR018136 Aconitase family, 4Fe-4S cluster binding site KEGG: 00290+4.2.1.33|UniPathway: UPA00048 SRM_RS12175 7c13cae278c83bcd382ca81d5b09be78 472 SUPERFAMILY SSF53732 4 468 6.93E-154 T 22-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 SRM_RS12175 7c13cae278c83bcd382ca81d5b09be78 472 Gene3D G3DSA:3.30.499.10 5 161 1.5E-21 T 22-04-2016 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 SRM_RS12175 7c13cae278c83bcd382ca81d5b09be78 472 Pfam PF00330 Aconitase family (aconitate hydratase) 8 460 3.0E-143 T 22-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 SRM_RS12175 7c13cae278c83bcd382ca81d5b09be78 472 ProSitePatterns PS00450 Aconitase family signature 1. 339 355 - T 22-04-2016 IPR018136 Aconitase family, 4Fe-4S cluster binding site KEGG: 00290+4.2.1.33|UniPathway: UPA00048 SRM_RS12175 7c13cae278c83bcd382ca81d5b09be78 472 PRINTS PR00415 Aconitase family signature 134 149 1.4E-45 T 22-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 SRM_RS12175 7c13cae278c83bcd382ca81d5b09be78 472 PRINTS PR00415 Aconitase family signature 83 96 1.4E-45 T 22-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 SRM_RS12175 7c13cae278c83bcd382ca81d5b09be78 472 PRINTS PR00415 Aconitase family signature 343 354 1.4E-45 T 22-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 SRM_RS12175 7c13cae278c83bcd382ca81d5b09be78 472 PRINTS PR00415 Aconitase family signature 196 209 1.4E-45 T 22-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 SRM_RS12175 7c13cae278c83bcd382ca81d5b09be78 472 PRINTS PR00415 Aconitase family signature 287 301 1.4E-45 T 22-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 SRM_RS12175 7c13cae278c83bcd382ca81d5b09be78 472 PRINTS PR00415 Aconitase family signature 109 117 1.4E-45 T 22-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 SRM_RS12175 7c13cae278c83bcd382ca81d5b09be78 472 PRINTS PR00415 Aconitase family signature 120 133 1.4E-45 T 22-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 SRM_RS12175 7c13cae278c83bcd382ca81d5b09be78 472 PRINTS PR00415 Aconitase family signature 401 414 1.4E-45 T 22-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 SRM_RS12175 7c13cae278c83bcd382ca81d5b09be78 472 PRINTS PR00415 Aconitase family signature 210 223 1.4E-45 T 22-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 SRM_RS12175 7c13cae278c83bcd382ca81d5b09be78 472 Hamap MF_01026 3-isopropylmalate dehydratase large subunit [leuC]. 2 469 53.432 T 22-04-2016 IPR004430 3-isopropylmalate dehydratase, large subunit GO:0003861|GO:0009098|GO:0051539 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 SRM_RS08420 ec0e7eea4e3b5774ebd956c76bdc007f 312 ProSitePatterns PS00665 Dihydrodipicolinate synthase signature 1. 42 59 - T 22-04-2016 IPR020624 Schiff base-forming aldolase, conserved site GO:0008152|GO:0016829 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 SRM_RS08420 ec0e7eea4e3b5774ebd956c76bdc007f 312 Gene3D G3DSA:3.20.20.70 2 301 9.5E-65 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 SRM_RS08420 ec0e7eea4e3b5774ebd956c76bdc007f 312 PRINTS PR00146 Dihydrodipicolinate synthase signature 136 153 1.7E-11 T 22-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 SRM_RS08420 ec0e7eea4e3b5774ebd956c76bdc007f 312 PRINTS PR00146 Dihydrodipicolinate synthase signature 75 93 1.7E-11 T 22-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 SRM_RS08420 ec0e7eea4e3b5774ebd956c76bdc007f 312 PRINTS PR00146 Dihydrodipicolinate synthase signature 39 60 1.7E-11 T 22-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 SRM_RS08420 ec0e7eea4e3b5774ebd956c76bdc007f 312 PANTHER PTHR12128 1 312 6.8E-80 T 22-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 SRM_RS08420 ec0e7eea4e3b5774ebd956c76bdc007f 312 SMART SM01130 5 298 5.9E-63 T 22-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 SRM_RS08420 ec0e7eea4e3b5774ebd956c76bdc007f 312 PIRSF PIRSF001365 3 306 7.1E-57 T 22-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 SRM_RS08420 ec0e7eea4e3b5774ebd956c76bdc007f 312 Pfam PF00701 Dihydrodipicolinate synthetase family 7 294 8.6E-42 T 22-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 SRM_RS08420 ec0e7eea4e3b5774ebd956c76bdc007f 312 SUPERFAMILY SSF51569 6 295 2.41E-65 T 22-04-2016 SRM_RS08420 ec0e7eea4e3b5774ebd956c76bdc007f 312 PANTHER PTHR12128:SF16 1 312 6.8E-80 T 22-04-2016 SRM_RS08045 0abe69716aabc82c0168f68565e59e36 149 SUPERFAMILY SSF55874 41 138 1.59E-9 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SRM_RS08045 0abe69716aabc82c0168f68565e59e36 149 Pfam PF13581 Histidine kinase-like ATPase domain 29 126 2.4E-14 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SRM_RS08045 0abe69716aabc82c0168f68565e59e36 149 Gene3D G3DSA:3.30.565.10 9 140 1.2E-6 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SRM_RS01530 9340ea8afccc535f2e57cfedf8a769d6 729 SUPERFAMILY SSF55874 613 717 1.44E-22 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SRM_RS01530 9340ea8afccc535f2e57cfedf8a769d6 729 Pfam PF01590 GAF domain 347 480 4.9E-5 T 22-04-2016 IPR003018 GAF domain GO:0005515 SRM_RS01530 9340ea8afccc535f2e57cfedf8a769d6 729 Pfam PF00512 His Kinase A (phospho-acceptor) domain 499 559 8.9E-11 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SRM_RS01530 9340ea8afccc535f2e57cfedf8a769d6 729 Gene3D G3DSA:3.30.450.20 188 316 1.8E-20 T 22-04-2016 SRM_RS01530 9340ea8afccc535f2e57cfedf8a769d6 729 Gene3D G3DSA:3.30.565.10 605 717 2.7E-24 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SRM_RS01530 9340ea8afccc535f2e57cfedf8a769d6 729 Gene3D G3DSA:1.10.287.130 494 555 7.4E-11 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SRM_RS01530 9340ea8afccc535f2e57cfedf8a769d6 729 SUPERFAMILY SSF55781 347 494 1.69E-16 T 22-04-2016 IPR029016 GAF domain-like SRM_RS01530 9340ea8afccc535f2e57cfedf8a769d6 729 PANTHER PTHR24423 303 335 2.0E-45 T 22-04-2016 SRM_RS01530 9340ea8afccc535f2e57cfedf8a769d6 729 PANTHER PTHR24423 494 716 2.0E-45 T 22-04-2016 SRM_RS01530 9340ea8afccc535f2e57cfedf8a769d6 729 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 623 717 9.4E-12 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SRM_RS01530 9340ea8afccc535f2e57cfedf8a769d6 729 SUPERFAMILY SSF47384 484 556 1.96E-13 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SRM_RS01530 9340ea8afccc535f2e57cfedf8a769d6 729 SMART SM00065 345 491 8.6E-4 T 22-04-2016 IPR003018 GAF domain GO:0005515 SRM_RS01530 9340ea8afccc535f2e57cfedf8a769d6 729 SMART SM00387 620 722 6.7E-22 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SRM_RS01530 9340ea8afccc535f2e57cfedf8a769d6 729 SMART SM00388 496 561 7.7E-12 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SRM_RS01530 9340ea8afccc535f2e57cfedf8a769d6 729 Gene3D G3DSA:3.30.450.40 324 493 6.6E-16 T 22-04-2016 IPR029016 GAF domain-like SRM_RS01530 9340ea8afccc535f2e57cfedf8a769d6 729 PANTHER PTHR24423:SF467 303 335 2.0E-45 T 22-04-2016 SRM_RS01530 9340ea8afccc535f2e57cfedf8a769d6 729 PANTHER PTHR24423:SF467 494 716 2.0E-45 T 22-04-2016 SRM_RS01530 9340ea8afccc535f2e57cfedf8a769d6 729 SUPERFAMILY SSF55785 184 316 2.93E-9 T 22-04-2016 IPR000014 PAS domain SRM_RS12940 aa71b8836278e0664663dd5613966cc5 217 Pfam PF00677 Lumazine binding domain 103 188 6.8E-20 T 22-04-2016 IPR026017 Lumazine-binding domain KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 SRM_RS12940 aa71b8836278e0664663dd5613966cc5 217 Pfam PF00677 Lumazine binding domain 3 90 5.0E-18 T 22-04-2016 IPR026017 Lumazine-binding domain KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 SRM_RS12940 aa71b8836278e0664663dd5613966cc5 217 Gene3D G3DSA:2.40.30.20 108 196 5.7E-26 T 22-04-2016 IPR023366 ATP synthase subunit alpha-like domain KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 SRM_RS12940 aa71b8836278e0664663dd5613966cc5 217 SUPERFAMILY SSF63380 96 198 1.96E-27 T 22-04-2016 IPR017938 Riboflavin synthase-like beta-barrel GO:0016491|GO:0055114 SRM_RS12940 aa71b8836278e0664663dd5613966cc5 217 PANTHER PTHR21098 1 196 2.5E-81 T 22-04-2016 IPR001783 Lumazine-binding protein KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 SRM_RS12940 aa71b8836278e0664663dd5613966cc5 217 PIRSF PIRSF000498 1 215 5.7E-61 T 22-04-2016 IPR001783 Lumazine-binding protein KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 SRM_RS12940 aa71b8836278e0664663dd5613966cc5 217 SUPERFAMILY SSF63380 1 96 1.87E-19 T 22-04-2016 IPR017938 Riboflavin synthase-like beta-barrel GO:0016491|GO:0055114 SRM_RS12940 aa71b8836278e0664663dd5613966cc5 217 Gene3D G3DSA:2.40.30.20 5 107 1.4E-26 T 22-04-2016 IPR023366 ATP synthase subunit alpha-like domain KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 SRM_RS12940 aa71b8836278e0664663dd5613966cc5 217 TIGRFAM TIGR00187 ribE: riboflavin synthase, alpha subunit 1 198 2.6E-53 T 22-04-2016 IPR001783 Lumazine-binding protein KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 SRM_RS13585 5b272e190c3e2a9768adc347c8cfdcd7 388 PANTHER PTHR28004 1 388 4.9E-85 T 22-04-2016 SRM_RS13585 5b272e190c3e2a9768adc347c8cfdcd7 388 SMART SM01119 270 373 2.0E-39 T 22-04-2016 IPR026956 D-serine dehydratase-like domain SRM_RS13585 5b272e190c3e2a9768adc347c8cfdcd7 388 Pfam PF14031 Putative serine dehydratase domain 270 372 1.3E-21 T 22-04-2016 IPR026956 D-serine dehydratase-like domain SRM_RS13585 5b272e190c3e2a9768adc347c8cfdcd7 388 Gene3D G3DSA:3.20.20.10 17 185 5.0E-24 T 22-04-2016 IPR029066 PLP-binding barrel SRM_RS13585 5b272e190c3e2a9768adc347c8cfdcd7 388 SUPERFAMILY SSF51419 14 258 1.13E-33 T 22-04-2016 IPR029066 PLP-binding barrel SRM_RS13585 5b272e190c3e2a9768adc347c8cfdcd7 388 Pfam PF01168 Alanine racemase, N-terminal domain 13 252 1.1E-26 T 22-04-2016 IPR001608 Alanine racemase, N-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 SRM_RS10150 d68f1fe317ec7aaedd764a1566a28956 178 SUPERFAMILY SSF160369 4 174 1.7E-45 T 22-04-2016 SRM_RS10150 d68f1fe317ec7aaedd764a1566a28956 178 Pfam PF00466 Ribosomal protein L10 3 99 3.7E-26 T 22-04-2016 IPR001790 Ribosomal protein L10P GO:0005622|GO:0042254 SRM_RS10150 d68f1fe317ec7aaedd764a1566a28956 178 ProSitePatterns PS01109 Ribosomal protein L10 signature. 8 42 - T 22-04-2016 IPR002363 Ribosomal protein L10, eubacterial, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 SRM_RS10150 d68f1fe317ec7aaedd764a1566a28956 178 Hamap MF_00362 50S ribosomal protein L10 [rplJ]. 3 164 21.264 T 22-04-2016 IPR022973 Ribosomal protein L10 SRM_RS10150 d68f1fe317ec7aaedd764a1566a28956 178 PANTHER PTHR11560 1 178 8.7E-44 T 22-04-2016 SRM_RS01150 5ce2c7e466ccde5d29bdf2d8c506565d 477 Gene3D G3DSA:3.30.390.30 341 463 1.0E-31 T 22-04-2016 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 SRM_RS01150 5ce2c7e466ccde5d29bdf2d8c506565d 477 PANTHER PTHR22912 7 122 3.3E-164 T 22-04-2016 SRM_RS01150 5ce2c7e466ccde5d29bdf2d8c506565d 477 PANTHER PTHR22912 141 465 3.3E-164 T 22-04-2016 SRM_RS01150 5ce2c7e466ccde5d29bdf2d8c506565d 477 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 182 200 1.3E-29 T 22-04-2016 SRM_RS01150 5ce2c7e466ccde5d29bdf2d8c506565d 477 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 298 320 1.3E-29 T 22-04-2016 SRM_RS01150 5ce2c7e466ccde5d29bdf2d8c506565d 477 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 9 28 1.3E-29 T 22-04-2016 SRM_RS01150 5ce2c7e466ccde5d29bdf2d8c506565d 477 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 143 161 1.3E-29 T 22-04-2016 SRM_RS01150 5ce2c7e466ccde5d29bdf2d8c506565d 477 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 269 285 1.3E-29 T 22-04-2016 SRM_RS01150 5ce2c7e466ccde5d29bdf2d8c506565d 477 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 40 55 9.4E-53 T 22-04-2016 SRM_RS01150 5ce2c7e466ccde5d29bdf2d8c506565d 477 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 436 456 9.4E-53 T 22-04-2016 SRM_RS01150 5ce2c7e466ccde5d29bdf2d8c506565d 477 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 270 284 9.4E-53 T 22-04-2016 SRM_RS01150 5ce2c7e466ccde5d29bdf2d8c506565d 477 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 182 207 9.4E-53 T 22-04-2016 SRM_RS01150 5ce2c7e466ccde5d29bdf2d8c506565d 477 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 8 30 9.4E-53 T 22-04-2016 SRM_RS01150 5ce2c7e466ccde5d29bdf2d8c506565d 477 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 414 429 9.4E-53 T 22-04-2016 SRM_RS01150 5ce2c7e466ccde5d29bdf2d8c506565d 477 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 349 370 9.4E-53 T 22-04-2016 SRM_RS01150 5ce2c7e466ccde5d29bdf2d8c506565d 477 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 146 155 9.4E-53 T 22-04-2016 SRM_RS01150 5ce2c7e466ccde5d29bdf2d8c506565d 477 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 313 320 9.4E-53 T 22-04-2016 SRM_RS01150 5ce2c7e466ccde5d29bdf2d8c506565d 477 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 9 329 1.8E-57 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SRM_RS01150 5ce2c7e466ccde5d29bdf2d8c506565d 477 Gene3D G3DSA:3.50.50.60 7 151 3.1E-34 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SRM_RS01150 5ce2c7e466ccde5d29bdf2d8c506565d 477 Pfam PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain 353 460 1.7E-23 T 22-04-2016 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 SRM_RS01150 5ce2c7e466ccde5d29bdf2d8c506565d 477 PANTHER PTHR22912:SF145 7 122 3.3E-164 T 22-04-2016 SRM_RS01150 5ce2c7e466ccde5d29bdf2d8c506565d 477 PANTHER PTHR22912:SF145 141 465 3.3E-164 T 22-04-2016 SRM_RS01150 5ce2c7e466ccde5d29bdf2d8c506565d 477 Gene3D G3DSA:3.50.50.60 152 339 4.1E-50 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SRM_RS01150 5ce2c7e466ccde5d29bdf2d8c506565d 477 SUPERFAMILY SSF55424 352 462 1.39E-29 T 22-04-2016 IPR016156 FAD/NAD-linked reductase, dimerisation domain GO:0016491|GO:0050660|GO:0055114 SRM_RS01150 5ce2c7e466ccde5d29bdf2d8c506565d 477 PIRSF PIRSF000350 2 464 2.7E-105 T 22-04-2016 SRM_RS01150 5ce2c7e466ccde5d29bdf2d8c506565d 477 SUPERFAMILY SSF51905 6 327 1.17E-49 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SRM_RS11035 69f1b4836905d5510e2798fee85ab6a1 435 Pfam PF00534 Glycosyl transferases group 1 228 408 3.3E-31 T 22-04-2016 IPR001296 Glycosyl transferase, family 1 SRM_RS11035 69f1b4836905d5510e2798fee85ab6a1 435 PANTHER PTHR12526 24 367 8.6E-159 T 22-04-2016 SRM_RS11035 69f1b4836905d5510e2798fee85ab6a1 435 PANTHER PTHR12526 383 432 8.6E-159 T 22-04-2016 SRM_RS11035 69f1b4836905d5510e2798fee85ab6a1 435 Gene3D G3DSA:3.40.50.2000 196 408 1.8E-48 T 22-04-2016 SRM_RS11035 69f1b4836905d5510e2798fee85ab6a1 435 SUPERFAMILY SSF53756 27 430 3.84E-88 T 22-04-2016 SRM_RS11035 69f1b4836905d5510e2798fee85ab6a1 435 PANTHER PTHR12526:SF355 24 367 8.6E-159 T 22-04-2016 SRM_RS11035 69f1b4836905d5510e2798fee85ab6a1 435 PANTHER PTHR12526:SF355 383 432 8.6E-159 T 22-04-2016 SRM_RS11035 69f1b4836905d5510e2798fee85ab6a1 435 TIGRFAM TIGR02149 glgA_Coryne: glycogen synthase, Corynebacterium family 27 430 7.8E-150 T 22-04-2016 IPR011875 Glycogen synthase, corynebacterial KEGG: 00500+2.4.1.21|MetaCyc: PWY-622|UniPathway: UPA00934 SRM_RS11035 69f1b4836905d5510e2798fee85ab6a1 435 Pfam PF13439 Glycosyltransferase Family 4 41 214 4.7E-31 T 22-04-2016 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain SRM_RS05225 d6c0129cfb3dd938d786151df4843913 462 PIRSF PIRSF000521 2 446 4.8E-129 T 22-04-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 SRM_RS05225 d6c0129cfb3dd938d786151df4843913 462 PANTHER PTHR11986 19 451 1.7E-107 T 22-04-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 SRM_RS05225 d6c0129cfb3dd938d786151df4843913 462 TIGRFAM TIGR03251 LAT_fam: L-lysine 6-transaminase 11 444 3.8E-232 T 22-04-2016 IPR017657 L-lysine 6-transaminase GO:0017000|GO:0030170|GO:0045484 MetaCyc: PWY-5298 SRM_RS05225 d6c0129cfb3dd938d786151df4843913 462 Gene3D G3DSA:3.40.640.10 85 336 1.5E-63 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 SRM_RS05225 d6c0129cfb3dd938d786151df4843913 462 PANTHER PTHR11986:SF7 19 451 1.7E-107 T 22-04-2016 SRM_RS05225 d6c0129cfb3dd938d786151df4843913 462 Gene3D G3DSA:3.90.1150.10 337 446 5.4E-25 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 SRM_RS05225 d6c0129cfb3dd938d786151df4843913 462 Pfam PF00202 Aminotransferase class-III 28 443 1.6E-80 T 22-04-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 SRM_RS05225 d6c0129cfb3dd938d786151df4843913 462 SUPERFAMILY SSF53383 29 445 2.33E-77 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase SRM_RS00755 021c6e3d887de69dc73580f121c81e84 308 PANTHER PTHR12151 51 292 7.7E-62 T 22-04-2016 IPR003782 Copper chaperone SCO1/SenC SRM_RS00755 021c6e3d887de69dc73580f121c81e84 308 SUPERFAMILY SSF52833 68 230 7.31E-17 T 22-04-2016 IPR012336 Thioredoxin-like fold SRM_RS00755 021c6e3d887de69dc73580f121c81e84 308 Gene3D G3DSA:3.40.30.10 65 226 1.5E-22 T 22-04-2016 IPR012336 Thioredoxin-like fold SRM_RS00755 021c6e3d887de69dc73580f121c81e84 308 PANTHER PTHR12151:SF8 51 292 7.7E-62 T 22-04-2016 SRM_RS13520 acbe89720955d9f47088d5e64217e399 435 SUPERFAMILY SSF53623 21 277 1.02E-81 T 22-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 SRM_RS13520 acbe89720955d9f47088d5e64217e399 435 Pfam PF08245 Mur ligase middle domain 48 268 3.0E-14 T 22-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 SRM_RS13520 acbe89720955d9f47088d5e64217e399 435 ProSitePatterns PS01012 Folylpolyglutamate synthase signature 2. 138 153 - T 22-04-2016 IPR018109 Folylpolyglutamate synthetase, conserved site GO:0004326|GO:0005524|GO:0009396 SRM_RS13520 acbe89720955d9f47088d5e64217e399 435 PIRSF PIRSF001563 7 433 6.0E-99 T 22-04-2016 IPR001645 Folylpolyglutamate synthetase GO:0004326|GO:0005524|GO:0009396 KEGG: 00790+6.3.2.17|MetaCyc: PWY-2161|UniPathway: UPA00850 SRM_RS13520 acbe89720955d9f47088d5e64217e399 435 Gene3D G3DSA:3.90.190.20 301 426 1.5E-18 T 22-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 SRM_RS13520 acbe89720955d9f47088d5e64217e399 435 SUPERFAMILY SSF53244 301 427 7.88E-17 T 22-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 SRM_RS13520 acbe89720955d9f47088d5e64217e399 435 Gene3D G3DSA:3.40.1190.10 3 294 8.8E-89 T 22-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 SRM_RS13520 acbe89720955d9f47088d5e64217e399 435 TIGRFAM TIGR01499 folC: bifunctional protein FolC 26 427 2.3E-94 T 22-04-2016 IPR001645 Folylpolyglutamate synthetase GO:0004326|GO:0005524|GO:0009396 KEGG: 00790+6.3.2.17|MetaCyc: PWY-2161|UniPathway: UPA00850 SRM_RS13520 acbe89720955d9f47088d5e64217e399 435 PANTHER PTHR11136 240 422 1.6E-97 T 22-04-2016 IPR001645 Folylpolyglutamate synthetase GO:0004326|GO:0005524|GO:0009396 KEGG: 00790+6.3.2.17|MetaCyc: PWY-2161|UniPathway: UPA00850 SRM_RS13520 acbe89720955d9f47088d5e64217e399 435 PANTHER PTHR11136 23 221 1.6E-97 T 22-04-2016 IPR001645 Folylpolyglutamate synthetase GO:0004326|GO:0005524|GO:0009396 KEGG: 00790+6.3.2.17|MetaCyc: PWY-2161|UniPathway: UPA00850 SRM_RS06520 4e2e26b277a3312782a4bb8e7b4d2fce 102 PANTHER PTHR10744 21 101 2.9E-36 T 22-04-2016 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SRM_RS06520 4e2e26b277a3312782a4bb8e7b4d2fce 102 ProSitePatterns PS00056 Ribosomal protein S17 signature. 75 87 - T 22-04-2016 IPR019979 Ribosomal protein S17, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 SRM_RS06520 4e2e26b277a3312782a4bb8e7b4d2fce 102 PANTHER PTHR10744:SF1 21 101 2.9E-36 T 22-04-2016 SRM_RS06520 4e2e26b277a3312782a4bb8e7b4d2fce 102 Hamap MF_01345_B 30S ribosomal protein S17 [rpsQ]. 22 100 24.353 T 22-04-2016 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SRM_RS06520 4e2e26b277a3312782a4bb8e7b4d2fce 102 ProDom PD001295 RIBOSOMAL S17 30S RIBONUCLEOPROTEIN RRNA-BINDING RNA-BINDING 40S S11 S17P S11 29 95 6.0E-20 T 22-04-2016 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SRM_RS06520 4e2e26b277a3312782a4bb8e7b4d2fce 102 SUPERFAMILY SSF50249 24 101 1.37E-30 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold SRM_RS06520 4e2e26b277a3312782a4bb8e7b4d2fce 102 TIGRFAM TIGR03635 uS17_bact: ribosomal protein uS17 24 95 7.5E-34 T 22-04-2016 IPR019984 Ribosomal protein S17, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 SRM_RS06520 4e2e26b277a3312782a4bb8e7b4d2fce 102 Gene3D G3DSA:2.40.50.140 24 101 4.0E-34 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold SRM_RS06520 4e2e26b277a3312782a4bb8e7b4d2fce 102 PRINTS PR00973 Ribosomal protein S17 family signature 85 92 3.9E-11 T 22-04-2016 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SRM_RS06520 4e2e26b277a3312782a4bb8e7b4d2fce 102 PRINTS PR00973 Ribosomal protein S17 family signature 43 66 3.9E-11 T 22-04-2016 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SRM_RS06520 4e2e26b277a3312782a4bb8e7b4d2fce 102 PRINTS PR00973 Ribosomal protein S17 family signature 75 85 3.9E-11 T 22-04-2016 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SRM_RS06520 4e2e26b277a3312782a4bb8e7b4d2fce 102 Pfam PF00366 Ribosomal protein S17 29 96 3.8E-31 T 22-04-2016 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SRM_RS06705 2e8e2974c431c30ed21adceb39c6bc66 246 Pfam PF05173 Dihydrodipicolinate reductase, C-terminus 107 240 1.3E-30 T 22-04-2016 IPR022663 Dihydrodipicolinate reductase, C-terminal GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 SRM_RS06705 2e8e2974c431c30ed21adceb39c6bc66 246 Hamap MF_00102 4-hydroxy-tetrahydrodipicolinate reductase [dapB]. 1 241 24.81 T 22-04-2016 IPR023940 Dihydrodipicolinate reductase GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 SRM_RS06705 2e8e2974c431c30ed21adceb39c6bc66 246 PANTHER PTHR20836 47 246 1.4E-46 T 22-04-2016 IPR023940 Dihydrodipicolinate reductase GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 SRM_RS06705 2e8e2974c431c30ed21adceb39c6bc66 246 SUPERFAMILY SSF51735 213 241 1.24E-22 T 22-04-2016 IPR016040 NAD(P)-binding domain SRM_RS06705 2e8e2974c431c30ed21adceb39c6bc66 246 SUPERFAMILY SSF51735 2 105 1.24E-22 T 22-04-2016 IPR016040 NAD(P)-binding domain SRM_RS06705 2e8e2974c431c30ed21adceb39c6bc66 246 SUPERFAMILY SSF55347 106 213 7.85E-21 T 22-04-2016 SRM_RS06705 2e8e2974c431c30ed21adceb39c6bc66 246 PIRSF PIRSF000161 1 242 2.2E-58 T 22-04-2016 IPR023940 Dihydrodipicolinate reductase GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 SRM_RS06705 2e8e2974c431c30ed21adceb39c6bc66 246 TIGRFAM TIGR00036 dapB: 4-hydroxy-tetrahydrodipicolinate reductase 37 241 2.1E-41 T 22-04-2016 IPR023940 Dihydrodipicolinate reductase GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 SRM_RS06705 2e8e2974c431c30ed21adceb39c6bc66 246 Pfam PF01113 Dihydrodipicolinate reductase, N-terminus 1 104 1.3E-13 T 22-04-2016 IPR000846 Dihydrodipicolinate reductase, N-terminal GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 SRM_RS06705 2e8e2974c431c30ed21adceb39c6bc66 246 Gene3D G3DSA:3.40.50.720 1 111 6.2E-15 T 22-04-2016 IPR016040 NAD(P)-binding domain SRM_RS06705 2e8e2974c431c30ed21adceb39c6bc66 246 Gene3D G3DSA:3.30.360.10 112 210 1.2E-23 T 22-04-2016 SRM_RS12255 00ffbc5cebbcb071803ed0a344b8cdab 230 SMART SM00100 70 188 5.3E-12 T 22-04-2016 IPR000595 Cyclic nucleotide-binding domain SRM_RS12255 00ffbc5cebbcb071803ed0a344b8cdab 230 Gene3D G3DSA:2.60.120.10 58 192 5.2E-21 T 22-04-2016 IPR014710 RmlC-like jelly roll fold SRM_RS12255 00ffbc5cebbcb071803ed0a344b8cdab 230 PANTHER PTHR24567 59 209 4.3E-15 T 22-04-2016 SRM_RS12255 00ffbc5cebbcb071803ed0a344b8cdab 230 Pfam PF00027 Cyclic nucleotide-binding domain 89 176 1.1E-13 T 22-04-2016 IPR000595 Cyclic nucleotide-binding domain SRM_RS12255 00ffbc5cebbcb071803ed0a344b8cdab 230 SUPERFAMILY SSF51206 64 193 7.2E-24 T 22-04-2016 IPR018490 Cyclic nucleotide-binding-like SRM_RS12255 00ffbc5cebbcb071803ed0a344b8cdab 230 PANTHER PTHR24567:SF30 59 209 4.3E-15 T 22-04-2016 SRM_RS15600 53f8ffcbba3177f1890206d98340c40a 123 Gene3D G3DSA:4.10.490.10 50 122 4.4E-21 T 22-04-2016 IPR000170 High potential iron-sulphur protein GO:0009055|GO:0019646 SRM_RS15600 53f8ffcbba3177f1890206d98340c40a 123 SUPERFAMILY SSF57652 66 122 1.57E-12 T 22-04-2016 IPR000170 High potential iron-sulphur protein GO:0009055|GO:0019646 SRM_RS15600 53f8ffcbba3177f1890206d98340c40a 123 Pfam PF01355 High potential iron-sulfur protein 76 120 4.4E-8 T 22-04-2016 IPR000170 High potential iron-sulphur protein GO:0009055|GO:0019646 SRM_RS11410 f507d29b1bdedf936937bd48ac8854d6 181 Hamap MF_00209 Inorganic pyrophosphatase [ppa]. 16 172 31.123 T 22-04-2016 IPR008162 Inorganic pyrophosphatase GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1|Reactome: REACT_21259|Reactome: REACT_71 SRM_RS11410 f507d29b1bdedf936937bd48ac8854d6 181 PANTHER PTHR10286:SF0 1 175 1.2E-85 T 22-04-2016 SRM_RS11410 f507d29b1bdedf936937bd48ac8854d6 181 ProSitePatterns PS00387 Inorganic pyrophosphatase signature. 67 73 - T 22-04-2016 IPR008162 Inorganic pyrophosphatase GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1|Reactome: REACT_21259|Reactome: REACT_71 SRM_RS11410 f507d29b1bdedf936937bd48ac8854d6 181 Pfam PF00719 Inorganic pyrophosphatase 20 172 4.3E-51 T 22-04-2016 IPR008162 Inorganic pyrophosphatase GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1|Reactome: REACT_21259|Reactome: REACT_71 SRM_RS11410 f507d29b1bdedf936937bd48ac8854d6 181 SUPERFAMILY SSF50324 2 176 2.35E-63 T 22-04-2016 IPR008162 Inorganic pyrophosphatase GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1|Reactome: REACT_21259|Reactome: REACT_71 SRM_RS11410 f507d29b1bdedf936937bd48ac8854d6 181 PANTHER PTHR10286 1 175 1.2E-85 T 22-04-2016 IPR008162 Inorganic pyrophosphatase GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1|Reactome: REACT_21259|Reactome: REACT_71 SRM_RS11410 f507d29b1bdedf936937bd48ac8854d6 181 Gene3D G3DSA:3.90.80.10 2 175 2.8E-58 T 22-04-2016 IPR008162 Inorganic pyrophosphatase GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1|Reactome: REACT_21259|Reactome: REACT_71 SRM_RS11790 cad93aa4f2b3988d8ab619f841b8db7b 526 PRINTS PR00096 Glutamine amidotransferase superfamily signature 82 93 1.3E-7 T 22-04-2016 SRM_RS11790 cad93aa4f2b3988d8ab619f841b8db7b 526 PRINTS PR00096 Glutamine amidotransferase superfamily signature 49 58 1.3E-7 T 22-04-2016 SRM_RS11790 cad93aa4f2b3988d8ab619f841b8db7b 526 PRINTS PR00096 Glutamine amidotransferase superfamily signature 174 187 1.3E-7 T 22-04-2016 SRM_RS11790 cad93aa4f2b3988d8ab619f841b8db7b 526 PANTHER PTHR11922:SF2 1 523 1.6E-278 T 22-04-2016 SRM_RS11790 cad93aa4f2b3988d8ab619f841b8db7b 526 TIGRFAM TIGR00888 guaA_Nterm: GMP synthase (glutamine-hydrolyzing), N-terminal domain 5 201 4.6E-72 T 22-04-2016 IPR004739 GMP synthase, N-terminal GO:0003922|GO:0005524|GO:0006177 KEGG: 00230+6.3.5.2|KEGG: 00983+6.3.5.2|MetaCyc: PWY-7221|UniPathway: UPA00189 SRM_RS11790 cad93aa4f2b3988d8ab619f841b8db7b 526 Pfam PF02540 NAD synthase 218 252 6.9E-7 T 22-04-2016 IPR022310 NAD/GMP synthase SRM_RS11790 cad93aa4f2b3988d8ab619f841b8db7b 526 SUPERFAMILY SSF52317 1 234 3.79E-58 T 22-04-2016 IPR029062 Class I glutamine amidotransferase-like SRM_RS11790 cad93aa4f2b3988d8ab619f841b8db7b 526 TIGRFAM TIGR00884 guaA_Cterm: GMP synthase (glutamine-hydrolyzing), C-terminal domain 210 526 1.7E-143 T 22-04-2016 IPR001674 GMP synthase, C-terminal GO:0003922|GO:0005524|GO:0006164|GO:0006177 KEGG: 00230+6.3.5.2|KEGG: 00983+6.3.5.2|MetaCyc: PWY-7221|UniPathway: UPA00189 SRM_RS11790 cad93aa4f2b3988d8ab619f841b8db7b 526 Gene3D G3DSA:3.40.50.880 2 219 1.4E-63 T 22-04-2016 IPR029062 Class I glutamine amidotransferase-like SRM_RS11790 cad93aa4f2b3988d8ab619f841b8db7b 526 Pfam PF00117 Glutamine amidotransferase class-I 7 196 8.2E-39 T 22-04-2016 IPR017926 Glutamine amidotransferase Reactome: REACT_1698 SRM_RS11790 cad93aa4f2b3988d8ab619f841b8db7b 526 Gene3D G3DSA:3.30.300.10 402 526 2.7E-53 T 22-04-2016 SRM_RS11790 cad93aa4f2b3988d8ab619f841b8db7b 526 Pfam PF00958 GMP synthase C terminal domain 434 525 1.7E-45 T 22-04-2016 IPR001674 GMP synthase, C-terminal GO:0003922|GO:0005524|GO:0006164|GO:0006177 KEGG: 00230+6.3.5.2|KEGG: 00983+6.3.5.2|MetaCyc: PWY-7221|UniPathway: UPA00189 SRM_RS11790 cad93aa4f2b3988d8ab619f841b8db7b 526 Gene3D G3DSA:3.40.50.620 220 399 7.1E-52 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold SRM_RS11790 cad93aa4f2b3988d8ab619f841b8db7b 526 SUPERFAMILY SSF52402 190 447 1.57E-56 T 22-04-2016 SRM_RS11790 cad93aa4f2b3988d8ab619f841b8db7b 526 PANTHER PTHR11922 1 523 1.6E-278 T 22-04-2016 SRM_RS11790 cad93aa4f2b3988d8ab619f841b8db7b 526 SUPERFAMILY SSF54810 406 526 2.22E-52 T 22-04-2016 SRM_RS11790 cad93aa4f2b3988d8ab619f841b8db7b 526 Hamap MF_00344 GMP synthase [glutamine-hydrolyzing] [guaA]. 2 526 53.652 T 22-04-2016 IPR022955 GMP synthase GO:0003922|GO:0006177 KEGG: 00230+6.3.5.2|KEGG: 00983+6.3.5.2|MetaCyc: PWY-7221|UniPathway: UPA00189 SRM_RS13695 a315966696487901e17b697be2a497c9 75 Pfam PF00313 'Cold-shock' DNA-binding domain 3 64 1.2E-16 T 22-04-2016 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 SRM_RS13695 a315966696487901e17b697be2a497c9 75 PIRSF PIRSF002599 1 74 3.1E-15 T 22-04-2016 IPR012156 Cold shock, CspA GO:0003676 SRM_RS13695 a315966696487901e17b697be2a497c9 75 SMART SM00357 3 68 1.2E-14 T 22-04-2016 IPR011129 Cold shock protein GO:0003676 SRM_RS13695 a315966696487901e17b697be2a497c9 75 SUPERFAMILY SSF50249 1 66 5.36E-17 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold SRM_RS13695 a315966696487901e17b697be2a497c9 75 PRINTS PR00050 Cold shock protein signature 41 59 1.1E-10 T 22-04-2016 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 SRM_RS13695 a315966696487901e17b697be2a497c9 75 PRINTS PR00050 Cold shock protein signature 25 34 1.1E-10 T 22-04-2016 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 SRM_RS13695 a315966696487901e17b697be2a497c9 75 PRINTS PR00050 Cold shock protein signature 4 19 1.1E-10 T 22-04-2016 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 SRM_RS13695 a315966696487901e17b697be2a497c9 75 Gene3D G3DSA:2.40.50.140 1 70 9.0E-22 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold SRM_RS13870 8bffdd6ed5df015dc6d273172bd5830e 245 SUPERFAMILY SSF52172 5 133 3.42E-41 T 22-04-2016 IPR011006 CheY-like superfamily SRM_RS13870 8bffdd6ed5df015dc6d273172bd5830e 245 Gene3D G3DSA:1.10.10.10 136 236 4.4E-39 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SRM_RS13870 8bffdd6ed5df015dc6d273172bd5830e 245 PANTHER PTHR26402 7 236 6.0E-103 T 22-04-2016 SRM_RS13870 8bffdd6ed5df015dc6d273172bd5830e 245 SMART SM00862 158 234 5.2E-33 T 22-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 SRM_RS13870 8bffdd6ed5df015dc6d273172bd5830e 245 SUPERFAMILY SSF46894 134 235 8.75E-33 T 22-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 SRM_RS13870 8bffdd6ed5df015dc6d273172bd5830e 245 Gene3D G3DSA:3.40.50.2300 5 129 1.9E-42 T 22-04-2016 SRM_RS13870 8bffdd6ed5df015dc6d273172bd5830e 245 SMART SM00448 7 118 5.2E-44 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SRM_RS13870 8bffdd6ed5df015dc6d273172bd5830e 245 Pfam PF00486 Transcriptional regulatory protein, C terminal 158 234 7.6E-30 T 22-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 SRM_RS13870 8bffdd6ed5df015dc6d273172bd5830e 245 PANTHER PTHR26402:SF614 7 236 6.0E-103 T 22-04-2016 SRM_RS13870 8bffdd6ed5df015dc6d273172bd5830e 245 Pfam PF00072 Response regulator receiver domain 9 118 7.0E-27 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SRM_RS13110 7c372971198a876ee637984deed7c3af 258 Gene3D G3DSA:1.10.150.20 80 119 2.0E-5 T 22-04-2016 SRM_RS13110 7c372971198a876ee637984deed7c3af 258 TIGRFAM TIGR00608 radc: DNA repair protein RadC 39 257 5.3E-60 T 22-04-2016 IPR001405 RadC protein SRM_RS13110 7c372971198a876ee637984deed7c3af 258 PANTHER PTHR30471 26 257 3.0E-89 T 22-04-2016 SRM_RS13110 7c372971198a876ee637984deed7c3af 258 Pfam PF04002 RadC-like JAB domain 137 255 5.5E-40 T 22-04-2016 IPR025657 RadC-like JAB domain SRM_RS13110 7c372971198a876ee637984deed7c3af 258 PANTHER PTHR30471:SF3 26 257 3.0E-89 T 22-04-2016 SRM_RS13110 7c372971198a876ee637984deed7c3af 258 ProSitePatterns PS01302 Uncharacterized protein family UPF0758 signature. 206 211 - T 22-04-2016 IPR020891 Uncharacterised protein family UPF0758, conserved site SRM_RS13110 7c372971198a876ee637984deed7c3af 258 Gene3D G3DSA:3.40.140.10 133 257 8.4E-42 T 22-04-2016 SRM_RS13110 7c372971198a876ee637984deed7c3af 258 SUPERFAMILY SSF47781 79 123 1.56E-6 T 22-04-2016 IPR010994 RuvA domain 2-like Reactome: REACT_216 SRM_RS14350 8b80db1be394e176bb80ca16d9935c18 248 SUPERFAMILY SSF88946 14 94 5.18E-16 T 22-04-2016 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 SRM_RS14350 8b80db1be394e176bb80ca16d9935c18 248 TIGRFAM TIGR02479 FliA_WhiG: RNA polymerase sigma factor, FliA/WhiG family 28 243 7.3E-58 T 22-04-2016 IPR012845 RNA polymerase sigma factor, FliA/WhiG GO:0003677|GO:0003899|GO:0006352|GO:0006355|GO:0016987 SRM_RS14350 8b80db1be394e176bb80ca16d9935c18 248 SUPERFAMILY SSF88659 96 167 1.26E-12 T 22-04-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 SRM_RS14350 8b80db1be394e176bb80ca16d9935c18 248 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 21 242 1.0E-29 T 22-04-2016 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 SRM_RS14350 8b80db1be394e176bb80ca16d9935c18 248 PANTHER PTHR30385 8 247 1.9E-38 T 22-04-2016 SRM_RS14350 8b80db1be394e176bb80ca16d9935c18 248 PRINTS PR00046 Major sigma-70 factor signature 196 208 6.5E-7 T 22-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 SRM_RS14350 8b80db1be394e176bb80ca16d9935c18 248 PRINTS PR00046 Major sigma-70 factor signature 51 64 6.5E-7 T 22-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 SRM_RS14350 8b80db1be394e176bb80ca16d9935c18 248 PRINTS PR00046 Major sigma-70 factor signature 213 228 6.5E-7 T 22-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 SRM_RS14350 8b80db1be394e176bb80ca16d9935c18 248 Gene3D G3DSA:1.10.601.10 21 90 2.7E-8 T 22-04-2016 SRM_RS14350 8b80db1be394e176bb80ca16d9935c18 248 Pfam PF04545 Sigma-70, region 4 193 233 5.8E-13 T 22-04-2016 IPR007630 RNA polymerase sigma-70 region 4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 SRM_RS14350 8b80db1be394e176bb80ca16d9935c18 248 Pfam PF04539 Sigma-70 region 3 105 174 3.0E-11 T 22-04-2016 IPR007624 RNA polymerase sigma-70 region 3 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 SRM_RS14350 8b80db1be394e176bb80ca16d9935c18 248 SUPERFAMILY SSF88659 157 245 1.25E-18 T 22-04-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 SRM_RS14350 8b80db1be394e176bb80ca16d9935c18 248 Pfam PF04542 Sigma-70 region 2 26 92 1.8E-11 T 22-04-2016 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 SRM_RS14350 8b80db1be394e176bb80ca16d9935c18 248 Gene3D G3DSA:1.10.10.10 181 245 4.9E-11 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SRM_RS14350 8b80db1be394e176bb80ca16d9935c18 248 Gene3D G3DSA:1.10.10.10 97 142 2.6E-6 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SRM_RS10255 e5d673043400d592fd5280838cff32c1 400 PANTHER PTHR11751 21 397 2.9E-165 T 22-04-2016 SRM_RS10255 e5d673043400d592fd5280838cff32c1 400 PANTHER PTHR11751:SF404 21 397 2.9E-165 T 22-04-2016 SRM_RS10255 e5d673043400d592fd5280838cff32c1 400 Gene3D G3DSA:3.90.1150.10 267 397 3.0E-47 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 SRM_RS10255 e5d673043400d592fd5280838cff32c1 400 Pfam PF00155 Aminotransferase class I and II 38 390 2.7E-73 T 22-04-2016 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 SRM_RS10255 e5d673043400d592fd5280838cff32c1 400 Gene3D G3DSA:3.40.640.10 52 266 1.4E-69 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 SRM_RS10255 e5d673043400d592fd5280838cff32c1 400 ProSitePatterns PS00105 Aminotransferases class-I pyridoxal-phosphate attachment site. 244 257 - T 22-04-2016 IPR004838 Aminotransferases, class-I, pyridoxal-phosphate-binding site GO:0003824|GO:0009058|GO:0030170 Reactome: REACT_13 SRM_RS10255 e5d673043400d592fd5280838cff32c1 400 SUPERFAMILY SSF53383 13 397 2.79E-115 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase SRM_RS08340 331e3343b3affa13020c41a0f1a5069c 86 Gene3D G3DSA:2.40.50.100 20 84 3.0E-31 T 22-04-2016 SRM_RS08340 331e3343b3affa13020c41a0f1a5069c 86 PANTHER PTHR15893 1 85 9.1E-43 T 22-04-2016 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SRM_RS08340 331e3343b3affa13020c41a0f1a5069c 86 ProDom PD003114 RIBOSOMAL L27 50S RIBONUCLEOPROTEIN CHLOROPLAST MITOCHONDRIAL PEPTIDE 60S TRANSIT PRECURSOR 28 69 5.0E-12 T 22-04-2016 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SRM_RS08340 331e3343b3affa13020c41a0f1a5069c 86 TIGRFAM TIGR00062 L27: ribosomal protein bL27 1 81 1.1E-35 T 22-04-2016 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SRM_RS08340 331e3343b3affa13020c41a0f1a5069c 86 SUPERFAMILY SSF110324 2 84 1.33E-32 T 22-04-2016 SRM_RS08340 331e3343b3affa13020c41a0f1a5069c 86 ProSitePatterns PS00831 Ribosomal protein L27 signature. 34 48 - T 22-04-2016 IPR018261 Ribosomal protein L27, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 SRM_RS08340 331e3343b3affa13020c41a0f1a5069c 86 Hamap MF_00539 50S ribosomal protein L27 [rpmA]. 1 84 25.907 T 22-04-2016 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SRM_RS08340 331e3343b3affa13020c41a0f1a5069c 86 Pfam PF01016 Ribosomal L27 protein 2 81 2.1E-36 T 22-04-2016 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SRM_RS08340 331e3343b3affa13020c41a0f1a5069c 86 PRINTS PR00063 Ribosomal protein L27 signature 29 53 6.7E-33 T 22-04-2016 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SRM_RS08340 331e3343b3affa13020c41a0f1a5069c 86 PRINTS PR00063 Ribosomal protein L27 signature 54 78 6.7E-33 T 22-04-2016 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SRM_RS08340 331e3343b3affa13020c41a0f1a5069c 86 PRINTS PR00063 Ribosomal protein L27 signature 4 28 6.7E-33 T 22-04-2016 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SRM_RS13805 3d0a330b2124b8e6d9bf256de0da3476 507 PANTHER PTHR30177 249 503 5.1E-61 T 22-04-2016 SRM_RS13805 3d0a330b2124b8e6d9bf256de0da3476 507 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 332 492 7.8E-19 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 SRM_RS13805 3d0a330b2124b8e6d9bf256de0da3476 507 PANTHER PTHR30177:SF4 249 503 5.1E-61 T 22-04-2016 SRM_RS13805 3d0a330b2124b8e6d9bf256de0da3476 507 Gene3D G3DSA:1.10.3720.10 294 489 7.1E-26 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 SRM_RS13805 3d0a330b2124b8e6d9bf256de0da3476 507 SUPERFAMILY SSF161098 310 488 8.11E-29 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 SRM_RS13805 3d0a330b2124b8e6d9bf256de0da3476 507 Pfam PF04069 Substrate binding domain of ABC-type glycine betaine transport system 39 293 2.8E-55 T 22-04-2016 IPR007210 ABC-type glycine betaine transport system, substrate-binding domain GO:0005215|GO:0006810 SRM_RS13805 3d0a330b2124b8e6d9bf256de0da3476 507 Gene3D G3DSA:3.40.190.10 36 135 3.7E-40 T 22-04-2016 SRM_RS13805 3d0a330b2124b8e6d9bf256de0da3476 507 Gene3D G3DSA:3.40.190.10 241 293 3.7E-40 T 22-04-2016 SRM_RS13805 3d0a330b2124b8e6d9bf256de0da3476 507 SUPERFAMILY SSF53850 39 293 1.19E-59 T 22-04-2016 SRM_RS13805 3d0a330b2124b8e6d9bf256de0da3476 507 Gene3D G3DSA:3.40.190.120 136 234 1.8E-30 T 22-04-2016 SRM_RS13450 e6a7f0ed93efa9e51cc780b54fb804bb 229 PANTHER PTHR24198 76 224 6.3E-43 T 22-04-2016 SRM_RS13450 e6a7f0ed93efa9e51cc780b54fb804bb 229 SUPERFAMILY SSF48403 76 226 1.83E-41 T 22-04-2016 IPR020683 Ankyrin repeat-containing domain SRM_RS13450 e6a7f0ed93efa9e51cc780b54fb804bb 229 Gene3D G3DSA:1.25.40.20 76 151 9.8E-23 T 22-04-2016 IPR020683 Ankyrin repeat-containing domain SRM_RS13450 e6a7f0ed93efa9e51cc780b54fb804bb 229 Gene3D G3DSA:1.25.40.20 152 227 2.7E-23 T 22-04-2016 IPR020683 Ankyrin repeat-containing domain SRM_RS13450 e6a7f0ed93efa9e51cc780b54fb804bb 229 Pfam PF12796 Ankyrin repeats (3 copies) 76 134 2.4E-8 T 22-04-2016 IPR020683 Ankyrin repeat-containing domain SRM_RS13450 e6a7f0ed93efa9e51cc780b54fb804bb 229 Pfam PF12796 Ankyrin repeats (3 copies) 141 223 5.2E-12 T 22-04-2016 IPR020683 Ankyrin repeat-containing domain SRM_RS13450 e6a7f0ed93efa9e51cc780b54fb804bb 229 SMART SM00248 103 132 1.3E-4 T 22-04-2016 IPR002110 Ankyrin repeat GO:0005515 SRM_RS13450 e6a7f0ed93efa9e51cc780b54fb804bb 229 SMART SM00248 136 165 0.36 T 22-04-2016 IPR002110 Ankyrin repeat GO:0005515 SRM_RS13450 e6a7f0ed93efa9e51cc780b54fb804bb 229 SMART SM00248 169 198 0.0057 T 22-04-2016 IPR002110 Ankyrin repeat GO:0005515 SRM_RS03840 6b4976dbc2e29918fdfe40c3efb6aa1d 805 Pfam PF02779 Transketolase, pyrimidine binding domain 480 655 2.1E-45 T 22-04-2016 IPR005475 Transketolase-like, pyrimidine-binding domain SRM_RS03840 6b4976dbc2e29918fdfe40c3efb6aa1d 805 SMART SM00861 480 656 6.7E-65 T 22-04-2016 IPR005475 Transketolase-like, pyrimidine-binding domain SRM_RS03840 6b4976dbc2e29918fdfe40c3efb6aa1d 805 Gene3D G3DSA:3.40.50.920 676 800 4.5E-44 T 22-04-2016 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 SRM_RS03840 6b4976dbc2e29918fdfe40c3efb6aa1d 805 PANTHER PTHR11624 261 451 4.7E-197 T 22-04-2016 IPR033247 Transketolase family SRM_RS03840 6b4976dbc2e29918fdfe40c3efb6aa1d 805 SUPERFAMILY SSF52518 133 460 5.12E-85 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold SRM_RS03840 6b4976dbc2e29918fdfe40c3efb6aa1d 805 Pfam PF02780 Transketolase, C-terminal domain 673 795 1.9E-38 T 22-04-2016 IPR033248 Transketolase, C-terminal domain SRM_RS03840 6b4976dbc2e29918fdfe40c3efb6aa1d 805 Gene3D G3DSA:3.40.50.970 94 460 9.0E-103 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold SRM_RS03840 6b4976dbc2e29918fdfe40c3efb6aa1d 805 SUPERFAMILY SSF52518 479 683 5.18E-65 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold SRM_RS03840 6b4976dbc2e29918fdfe40c3efb6aa1d 805 PANTHER PTHR11624 473 802 4.7E-197 T 22-04-2016 IPR033247 Transketolase family SRM_RS03840 6b4976dbc2e29918fdfe40c3efb6aa1d 805 PANTHER PTHR11624:SF21 473 802 4.7E-197 T 22-04-2016 SRM_RS03840 6b4976dbc2e29918fdfe40c3efb6aa1d 805 SUPERFAMILY SSF52922 667 802 7.59E-40 T 22-04-2016 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 SRM_RS03840 6b4976dbc2e29918fdfe40c3efb6aa1d 805 Gene3D G3DSA:3.40.50.970 478 675 1.9E-76 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold SRM_RS03840 6b4976dbc2e29918fdfe40c3efb6aa1d 805 Pfam PF00676 Dehydrogenase E1 component 146 450 5.0E-60 T 22-04-2016 IPR001017 Dehydrogenase, E1 component GO:0008152|GO:0016624 SRM_RS03840 6b4976dbc2e29918fdfe40c3efb6aa1d 805 PANTHER PTHR11624:SF21 261 451 4.7E-197 T 22-04-2016 SRM_RS07045 dcf9c200b362c5ffc0fcc8096d38fb5e 1514 SUPERFAMILY SSF51395 467 1213 1.31E-247 T 22-04-2016 SRM_RS07045 dcf9c200b362c5ffc0fcc8096d38fb5e 1514 PANTHER PTHR11938:SF1 11 1493 0.0 T 22-04-2016 SRM_RS07045 dcf9c200b362c5ffc0fcc8096d38fb5e 1514 Pfam PF01493 GXGXG motif 1256 1442 3.0E-81 T 22-04-2016 IPR002489 Glutamate synthase, alpha subunit, C-terminal GO:0008152|GO:0016491|GO:0055114 SRM_RS07045 dcf9c200b362c5ffc0fcc8096d38fb5e 1514 Gene3D G3DSA:3.20.20.70 832 1225 1.2E-164 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 SRM_RS07045 dcf9c200b362c5ffc0fcc8096d38fb5e 1514 SUPERFAMILY SSF56235 18 427 2.08E-134 T 22-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal SRM_RS07045 dcf9c200b362c5ffc0fcc8096d38fb5e 1514 Pfam PF01645 Conserved region in glutamate synthase 815 1179 2.9E-150 T 22-04-2016 IPR002932 Glutamate synthase domain GO:0006537|GO:0015930|GO:0016638|GO:0055114 SRM_RS07045 dcf9c200b362c5ffc0fcc8096d38fb5e 1514 Pfam PF04898 Glutamate synthase central domain 474 753 2.4E-111 T 22-04-2016 IPR006982 Glutamate synthase, central-N GO:0006807|GO:0015930|GO:0055114 UniPathway: UPA00045 SRM_RS07045 dcf9c200b362c5ffc0fcc8096d38fb5e 1514 Pfam PF00310 Glutamine amidotransferases class-II 18 434 1.4E-158 T 22-04-2016 IPR017932 Glutamine amidotransferase type 2 domain SRM_RS07045 dcf9c200b362c5ffc0fcc8096d38fb5e 1514 SUPERFAMILY SSF69336 1225 1489 4.19E-94 T 22-04-2016 IPR002489 Glutamate synthase, alpha subunit, C-terminal GO:0008152|GO:0016491|GO:0055114 SRM_RS07045 dcf9c200b362c5ffc0fcc8096d38fb5e 1514 Gene3D G3DSA:2.160.20.60 1230 1490 1.3E-101 T 22-04-2016 IPR002489 Glutamate synthase, alpha subunit, C-terminal GO:0008152|GO:0016491|GO:0055114 SRM_RS07045 dcf9c200b362c5ffc0fcc8096d38fb5e 1514 Gene3D G3DSA:3.20.20.70 467 803 1.0E-98 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 SRM_RS07045 dcf9c200b362c5ffc0fcc8096d38fb5e 1514 PANTHER PTHR11938 11 1493 0.0 T 22-04-2016 SRM_RS07045 dcf9c200b362c5ffc0fcc8096d38fb5e 1514 Gene3D G3DSA:3.60.20.10 18 444 6.4E-162 T 22-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal SRM_RS10630 cb133b3e68435b1ab9c62194fdf5f09d 428 TIGRFAM TIGR00414 serS: serine--tRNA ligase 1 418 1.1E-145 T 22-04-2016 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281|Reactome: REACT_71|UniPathway: UPA00906 SRM_RS10630 cb133b3e68435b1ab9c62194fdf5f09d 428 SUPERFAMILY SSF55681 120 422 7.57E-88 T 22-04-2016 SRM_RS10630 cb133b3e68435b1ab9c62194fdf5f09d 428 Pfam PF02403 Seryl-tRNA synthetase N-terminal domain 1 111 1.4E-27 T 22-04-2016 IPR015866 Serine-tRNA synthetase, type1, N-terminal KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281|UniPathway: UPA00906 SRM_RS10630 cb133b3e68435b1ab9c62194fdf5f09d 428 Gene3D G3DSA:3.30.930.10 109 420 2.9E-120 T 22-04-2016 SRM_RS10630 cb133b3e68435b1ab9c62194fdf5f09d 428 Pfam PF00587 tRNA synthetase class II core domain (G, H, P, S and T) 226 402 1.8E-22 T 22-04-2016 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 SRM_RS10630 cb133b3e68435b1ab9c62194fdf5f09d 428 PANTHER PTHR11778 1 424 1.0E-179 T 22-04-2016 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281|Reactome: REACT_71|UniPathway: UPA00906 SRM_RS10630 cb133b3e68435b1ab9c62194fdf5f09d 428 SUPERFAMILY SSF46589 1 116 6.8E-27 T 22-04-2016 IPR010978 tRNA-binding arm GO:0000166 Reactome: REACT_71 SRM_RS10630 cb133b3e68435b1ab9c62194fdf5f09d 428 Gene3D G3DSA:1.10.287.40 1 108 2.2E-24 T 22-04-2016 IPR015866 Serine-tRNA synthetase, type1, N-terminal KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281|UniPathway: UPA00906 SRM_RS10630 cb133b3e68435b1ab9c62194fdf5f09d 428 PIRSF PIRSF001529 1 426 2.4E-153 T 22-04-2016 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281|Reactome: REACT_71|UniPathway: UPA00906 SRM_RS10630 cb133b3e68435b1ab9c62194fdf5f09d 428 Hamap MF_00176 Serine--tRNA ligase [serS]. 1 424 38.385 T 22-04-2016 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281|Reactome: REACT_71|UniPathway: UPA00906 SRM_RS10630 cb133b3e68435b1ab9c62194fdf5f09d 428 PRINTS PR00981 Seryl-tRNA synthetase signature 318 331 6.2E-24 T 22-04-2016 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281|Reactome: REACT_71|UniPathway: UPA00906 SRM_RS10630 cb133b3e68435b1ab9c62194fdf5f09d 428 PRINTS PR00981 Seryl-tRNA synthetase signature 335 351 6.2E-24 T 22-04-2016 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281|Reactome: REACT_71|UniPathway: UPA00906 SRM_RS10630 cb133b3e68435b1ab9c62194fdf5f09d 428 PRINTS PR00981 Seryl-tRNA synthetase signature 266 278 6.2E-24 T 22-04-2016 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281|Reactome: REACT_71|UniPathway: UPA00906 SRM_RS10630 cb133b3e68435b1ab9c62194fdf5f09d 428 PRINTS PR00981 Seryl-tRNA synthetase signature 353 369 6.2E-24 T 22-04-2016 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281|Reactome: REACT_71|UniPathway: UPA00906 SRM_RS10630 cb133b3e68435b1ab9c62194fdf5f09d 428 PRINTS PR00981 Seryl-tRNA synthetase signature 278 291 6.2E-24 T 22-04-2016 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281|Reactome: REACT_71|UniPathway: UPA00906 SRM_RS07515 e10278337539d45a0be9ce5cf695022c 549 Gene3D G3DSA:3.40.50.720 339 457 1.2E-20 T 22-04-2016 IPR016040 NAD(P)-binding domain SRM_RS07515 e10278337539d45a0be9ce5cf695022c 549 PANTHER PTHR16254 40 269 1.6E-32 T 22-04-2016 SRM_RS07515 e10278337539d45a0be9ce5cf695022c 549 Pfam PF02080 TrkA-C domain 260 329 1.5E-9 T 22-04-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 SRM_RS07515 e10278337539d45a0be9ce5cf695022c 549 Pfam PF02080 TrkA-C domain 479 543 4.3E-8 T 22-04-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 SRM_RS07515 e10278337539d45a0be9ce5cf695022c 549 SUPERFAMILY SSF116726 247 329 1.03E-12 T 22-04-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 SRM_RS07515 e10278337539d45a0be9ce5cf695022c 549 SUPERFAMILY SSF81324 5 133 1.57E-6 T 22-04-2016 SRM_RS07515 e10278337539d45a0be9ce5cf695022c 549 SUPERFAMILY SSF51735 109 247 3.61E-23 T 22-04-2016 IPR016040 NAD(P)-binding domain SRM_RS07515 e10278337539d45a0be9ce5cf695022c 549 Gene3D G3DSA:3.30.70.1450 256 330 3.4E-12 T 22-04-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 SRM_RS07515 e10278337539d45a0be9ce5cf695022c 549 Gene3D G3DSA:3.30.70.1450 475 543 1.4E-10 T 22-04-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 SRM_RS07515 e10278337539d45a0be9ce5cf695022c 549 SUPERFAMILY SSF51735 340 463 1.26E-22 T 22-04-2016 IPR016040 NAD(P)-binding domain SRM_RS07515 e10278337539d45a0be9ce5cf695022c 549 Pfam PF02254 TrkA-N domain 341 445 1.6E-17 T 22-04-2016 IPR003148 Regulator of K+ conductance, N-terminal GO:0006813 SRM_RS07515 e10278337539d45a0be9ce5cf695022c 549 Pfam PF02254 TrkA-N domain 113 227 6.7E-19 T 22-04-2016 IPR003148 Regulator of K+ conductance, N-terminal GO:0006813 SRM_RS07515 e10278337539d45a0be9ce5cf695022c 549 Gene3D G3DSA:3.40.50.720 110 248 1.1E-26 T 22-04-2016 IPR016040 NAD(P)-binding domain SRM_RS07515 e10278337539d45a0be9ce5cf695022c 549 PANTHER PTHR16254:SF21 40 269 1.6E-32 T 22-04-2016 SRM_RS07515 e10278337539d45a0be9ce5cf695022c 549 SUPERFAMILY SSF116726 466 543 3.53E-9 T 22-04-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 SRM_RS11255 a5eadc5278a376ae70d46106937bf4c9 293 PANTHER PTHR10859 37 292 1.4E-72 T 22-04-2016 SRM_RS11255 a5eadc5278a376ae70d46106937bf4c9 293 SUPERFAMILY SSF53448 34 269 2.46E-48 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases SRM_RS11255 a5eadc5278a376ae70d46106937bf4c9 293 Pfam PF00535 Glycosyl transferase family 2 58 223 2.6E-30 T 22-04-2016 IPR001173 Glycosyltransferase 2-like SRM_RS11255 a5eadc5278a376ae70d46106937bf4c9 293 Gene3D G3DSA:3.90.550.10 58 269 1.3E-26 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases SRM_RS11290 ea58d8b391531de6d61b1d37b595cdfa 373 SUPERFAMILY SSF111369 62 298 4.32E-23 T 22-04-2016 SRM_RS11290 ea58d8b391531de6d61b1d37b595cdfa 373 Gene3D G3DSA:2.40.50.100 180 211 1.8E-14 T 22-04-2016 SRM_RS11290 ea58d8b391531de6d61b1d37b595cdfa 373 Gene3D G3DSA:2.40.50.100 73 105 1.8E-14 T 22-04-2016 SRM_RS11290 ea58d8b391531de6d61b1d37b595cdfa 373 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 70 293 4.2E-25 T 22-04-2016 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain SRM_RS11290 ea58d8b391531de6d61b1d37b595cdfa 373 PANTHER PTHR30469:SF15 21 371 3.9E-69 T 22-04-2016 SRM_RS11290 ea58d8b391531de6d61b1d37b595cdfa 373 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 47 372 2.8E-68 T 22-04-2016 IPR006143 RND efflux pump, membrane fusion protein GO:0016020|GO:0055085 SRM_RS11290 ea58d8b391531de6d61b1d37b595cdfa 373 PANTHER PTHR30469 21 371 3.9E-69 T 22-04-2016 SRM_RS04740 b845b02e6e286bbe758e7375e532a2ed 243 PANTHER PTHR16254:SF19 32 186 1.2E-38 T 22-04-2016 SRM_RS04740 b845b02e6e286bbe758e7375e532a2ed 243 Pfam PF02254 TrkA-N domain 32 135 1.6E-24 T 22-04-2016 IPR003148 Regulator of K+ conductance, N-terminal GO:0006813 SRM_RS04740 b845b02e6e286bbe758e7375e532a2ed 243 SUPERFAMILY SSF51735 31 165 1.14E-30 T 22-04-2016 IPR016040 NAD(P)-binding domain SRM_RS04740 b845b02e6e286bbe758e7375e532a2ed 243 PANTHER PTHR16254 32 186 1.2E-38 T 22-04-2016 SRM_RS04740 b845b02e6e286bbe758e7375e532a2ed 243 PRINTS PR00335 TrkA potassium uptake protein signature 102 116 9.4E-10 T 22-04-2016 IPR006036 Potassium uptake protein TrkA GO:0005886|GO:0006813|GO:0015079 SRM_RS04740 b845b02e6e286bbe758e7375e532a2ed 243 PRINTS PR00335 TrkA potassium uptake protein signature 48 62 9.4E-10 T 22-04-2016 IPR006036 Potassium uptake protein TrkA GO:0005886|GO:0006813|GO:0015079 SRM_RS04740 b845b02e6e286bbe758e7375e532a2ed 243 PRINTS PR00335 TrkA potassium uptake protein signature 89 99 9.4E-10 T 22-04-2016 IPR006036 Potassium uptake protein TrkA GO:0005886|GO:0006813|GO:0015079 SRM_RS04740 b845b02e6e286bbe758e7375e532a2ed 243 PRINTS PR00335 TrkA potassium uptake protein signature 31 45 9.4E-10 T 22-04-2016 IPR006036 Potassium uptake protein TrkA GO:0005886|GO:0006813|GO:0015079 SRM_RS04740 b845b02e6e286bbe758e7375e532a2ed 243 PRINTS PR00335 TrkA potassium uptake protein signature 78 88 9.4E-10 T 22-04-2016 IPR006036 Potassium uptake protein TrkA GO:0005886|GO:0006813|GO:0015079 SRM_RS04740 b845b02e6e286bbe758e7375e532a2ed 243 SUPERFAMILY SSF116726 162 239 8.37E-5 T 22-04-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 SRM_RS04740 b845b02e6e286bbe758e7375e532a2ed 243 Gene3D G3DSA:3.40.50.720 28 164 3.4E-35 T 22-04-2016 IPR016040 NAD(P)-binding domain SRM_RS11785 360389d4fba53f11dce3794a62500e52 594 SUPERFAMILY SSF48452 68 158 1.24E-6 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 SRM_RS11785 360389d4fba53f11dce3794a62500e52 594 Pfam PF13458 Periplasmic binding protein 273 559 1.4E-15 T 22-04-2016 IPR028081 Leucine-binding protein domain SRM_RS11785 360389d4fba53f11dce3794a62500e52 594 PANTHER PTHR30483 272 391 4.6E-15 T 22-04-2016 SRM_RS11785 360389d4fba53f11dce3794a62500e52 594 SUPERFAMILY SSF53822 270 590 1.01E-21 T 22-04-2016 IPR028082 Periplasmic binding protein-like I SRM_RS11785 360389d4fba53f11dce3794a62500e52 594 Gene3D G3DSA:1.25.40.10 69 139 4.8E-6 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 SRM_RS11785 360389d4fba53f11dce3794a62500e52 594 Gene3D G3DSA:3.40.50.2300 274 404 6.2E-21 T 22-04-2016 SRM_RS11785 360389d4fba53f11dce3794a62500e52 594 Gene3D G3DSA:3.40.50.2300 165 223 6.2E-21 T 22-04-2016 SRM_RS11785 360389d4fba53f11dce3794a62500e52 594 PANTHER PTHR30483:SF6 272 391 4.6E-15 T 22-04-2016 IPR000709 Leu/Ile/Val-binding protein GO:0006865 SRM_RS08590 407ca5a957ae55da6446e72b17212063 372 Pfam PF08402 TOBE domain 287 363 2.5E-7 T 22-04-2016 IPR013611 Transport-associated OB, type 2 GO:0005215|GO:0005524|GO:0006810|GO:0016820|GO:0043190 SRM_RS08590 407ca5a957ae55da6446e72b17212063 372 SUPERFAMILY SSF50331 242 366 1.09E-18 T 22-04-2016 IPR008995 Molybdate/tungstate binding, C-terminal SRM_RS08590 407ca5a957ae55da6446e72b17212063 372 Pfam PF00005 ABC transporter 25 167 3.3E-21 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 SRM_RS08590 407ca5a957ae55da6446e72b17212063 372 Gene3D G3DSA:2.40.50.140 290 356 7.3E-8 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold SRM_RS08590 407ca5a957ae55da6446e72b17212063 372 PANTHER PTHR24220:SF151 5 249 5.7E-80 T 22-04-2016 SRM_RS08590 407ca5a957ae55da6446e72b17212063 372 SMART SM00382 33 217 3.1E-8 T 22-04-2016 IPR003593 AAA+ ATPase domain SRM_RS08590 407ca5a957ae55da6446e72b17212063 372 PANTHER PTHR24220 5 249 5.7E-80 T 22-04-2016 SRM_RS08590 407ca5a957ae55da6446e72b17212063 372 SUPERFAMILY SSF52540 4 249 9.02E-59 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SRM_RS08590 407ca5a957ae55da6446e72b17212063 372 Gene3D G3DSA:3.40.50.300 3 236 4.1E-54 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SRM_RS10655 802ed30668e4a86760284dc003d4825d 107 SUPERFAMILY SSF103515 15 107 2.35E-6 T 22-04-2016 IPR005546 Autotransporter beta-domain SRM_RS10220 2218c52646fbac1db0634d20f609fb0a 88 TIGRFAM TIGR00952 S15_bact: ribosomal protein uS15 3 88 1.1E-31 T 22-04-2016 IPR005290 Ribosomal protein S15, bacterial-type GO:0003735|GO:0005840|GO:0006412 SRM_RS10220 2218c52646fbac1db0634d20f609fb0a 88 SMART SM01387 7 87 1.4E-39 T 22-04-2016 IPR000589 Ribosomal protein S15 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SRM_RS10220 2218c52646fbac1db0634d20f609fb0a 88 Pfam PF00312 Ribosomal protein S15 8 87 5.2E-31 T 22-04-2016 IPR000589 Ribosomal protein S15 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SRM_RS10220 2218c52646fbac1db0634d20f609fb0a 88 Gene3D G3DSA:1.10.287.10 2 88 1.7E-34 T 22-04-2016 IPR009068 S15/NS1, RNA-binding Reactome: REACT_71 SRM_RS10220 2218c52646fbac1db0634d20f609fb0a 88 Hamap MF_01343_B 30S ribosomal protein S15 [rpsO]. 2 88 20.658 T 22-04-2016 IPR005290 Ribosomal protein S15, bacterial-type GO:0003735|GO:0005840|GO:0006412 SRM_RS10220 2218c52646fbac1db0634d20f609fb0a 88 PANTHER PTHR23321 2 87 1.5E-29 T 22-04-2016 SRM_RS10220 2218c52646fbac1db0634d20f609fb0a 88 ProSitePatterns PS00362 Ribosomal protein S15 signature. 38 68 - T 22-04-2016 IPR000589 Ribosomal protein S15 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SRM_RS10220 2218c52646fbac1db0634d20f609fb0a 88 SUPERFAMILY SSF47060 1 88 9.71E-30 T 22-04-2016 IPR009068 S15/NS1, RNA-binding Reactome: REACT_71 SRM_RS10220 2218c52646fbac1db0634d20f609fb0a 88 ProDom PD157043 RIBOSOMAL S15 RIBONUCLEOPROTEIN RRNA-BINDING RNA-BINDING 30S CHLOROPLAST S15 MITOCHONDRIAL TYPE 9 87 9.0E-22 T 22-04-2016 SRM_RS04970 66e11d61bb582ae5b0fbf3053128fe5b 276 PRINTS PR00164 ABC-2 type transport system membrane protein signature 223 242 3.2E-9 T 22-04-2016 IPR000412 ABC-2 transporter GO:0006810|GO:0016020 SRM_RS04970 66e11d61bb582ae5b0fbf3053128fe5b 276 PRINTS PR00164 ABC-2 type transport system membrane protein signature 53 74 3.2E-9 T 22-04-2016 IPR000412 ABC-2 transporter GO:0006810|GO:0016020 SRM_RS04970 66e11d61bb582ae5b0fbf3053128fe5b 276 PRINTS PR00164 ABC-2 type transport system membrane protein signature 166 190 3.2E-9 T 22-04-2016 IPR000412 ABC-2 transporter GO:0006810|GO:0016020 SRM_RS04970 66e11d61bb582ae5b0fbf3053128fe5b 276 PRINTS PR00164 ABC-2 type transport system membrane protein signature 203 222 3.2E-9 T 22-04-2016 IPR000412 ABC-2 transporter GO:0006810|GO:0016020 SRM_RS04970 66e11d61bb582ae5b0fbf3053128fe5b 276 Pfam PF01061 ABC-2 type transporter 34 243 1.8E-27 T 22-04-2016 IPR013525 ABC-2 type transporter GO:0016020 SRM_RS04970 66e11d61bb582ae5b0fbf3053128fe5b 276 PANTHER PTHR30294 32 275 1.4E-33 T 22-04-2016 SRM_RS04970 66e11d61bb582ae5b0fbf3053128fe5b 276 PIRSF PIRSF006648 5 276 3.5E-31 T 22-04-2016 IPR000412 ABC-2 transporter GO:0006810|GO:0016020 SRM_RS14560 4b3e5fdd902e2a877a974c8c42e42536 512 Pfam PF02954 Bacterial regulatory protein, Fis family 465 505 1.8E-9 T 22-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 SRM_RS14560 4b3e5fdd902e2a877a974c8c42e42536 512 Gene3D G3DSA:1.10.8.60 361 433 5.1E-21 T 22-04-2016 SRM_RS14560 4b3e5fdd902e2a877a974c8c42e42536 512 Pfam PF00158 Sigma-54 interaction domain 189 354 1.1E-63 T 22-04-2016 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 SRM_RS14560 4b3e5fdd902e2a877a974c8c42e42536 512 SUPERFAMILY SSF52172 13 232 5.55E-35 T 22-04-2016 IPR011006 CheY-like superfamily SRM_RS14560 4b3e5fdd902e2a877a974c8c42e42536 512 SUPERFAMILY SSF52540 188 431 5.19E-65 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SRM_RS14560 4b3e5fdd902e2a877a974c8c42e42536 512 SUPERFAMILY SSF46689 401 505 2.08E-9 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 SRM_RS14560 4b3e5fdd902e2a877a974c8c42e42536 512 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 274 289 - T 22-04-2016 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 SRM_RS14560 4b3e5fdd902e2a877a974c8c42e42536 512 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 212 225 - T 22-04-2016 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 SRM_RS14560 4b3e5fdd902e2a877a974c8c42e42536 512 Gene3D G3DSA:3.40.50.2300 13 135 1.0E-34 T 22-04-2016 SRM_RS14560 4b3e5fdd902e2a877a974c8c42e42536 512 Gene3D G3DSA:1.10.10.60 458 505 2.6E-10 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 SRM_RS14560 4b3e5fdd902e2a877a974c8c42e42536 512 SMART SM00448 14 125 2.2E-27 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SRM_RS14560 4b3e5fdd902e2a877a974c8c42e42536 512 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 401 410 - T 22-04-2016 IPR025944 Sigma-54 interaction domain, conserved site SRM_RS14560 4b3e5fdd902e2a877a974c8c42e42536 512 PANTHER PTHR32071 16 505 5.2E-160 T 22-04-2016 SRM_RS14560 4b3e5fdd902e2a877a974c8c42e42536 512 Pfam PF00072 Response regulator receiver domain 16 125 5.7E-26 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SRM_RS14560 4b3e5fdd902e2a877a974c8c42e42536 512 Gene3D G3DSA:3.40.50.300 186 360 1.1E-54 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SRM_RS14560 4b3e5fdd902e2a877a974c8c42e42536 512 SMART SM00382 208 351 2.3E-10 T 22-04-2016 IPR003593 AAA+ ATPase domain SRM_RS11335 98ba55f033914eaaf95590a14b6db328 307 SUPERFAMILY SSF53649 182 300 7.52E-28 T 22-04-2016 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 SRM_RS11335 98ba55f033914eaaf95590a14b6db328 307 SUPERFAMILY SSF53649 2 123 7.52E-28 T 22-04-2016 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 SRM_RS11335 98ba55f033914eaaf95590a14b6db328 307 PANTHER PTHR21110 2 307 3.9E-26 T 22-04-2016 SRM_RS11335 98ba55f033914eaaf95590a14b6db328 307 Gene3D G3DSA:3.40.720.10 184 301 1.0E-48 T 22-04-2016 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 SRM_RS11335 98ba55f033914eaaf95590a14b6db328 307 Gene3D G3DSA:3.40.720.10 2 111 1.0E-48 T 22-04-2016 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 SRM_RS11335 98ba55f033914eaaf95590a14b6db328 307 PANTHER PTHR21110:SF0 2 307 3.9E-26 T 22-04-2016 SRM_RS11335 98ba55f033914eaaf95590a14b6db328 307 Pfam PF01676 Metalloenzyme superfamily 180 301 3.0E-18 T 22-04-2016 IPR006124 Metalloenzyme GO:0003824|GO:0046872 SRM_RS10605 756dfbe2f05c9b4b96a32e132a0d5d6d 639 SUPERFAMILY SSF48452 60 225 1.48E-12 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 SRM_RS10605 756dfbe2f05c9b4b96a32e132a0d5d6d 639 Gene3D G3DSA:1.25.40.10 60 285 5.5E-21 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 SRM_RS10605 756dfbe2f05c9b4b96a32e132a0d5d6d 639 Pfam PF13432 Tetratricopeptide repeat 556 620 8.6E-8 T 22-04-2016 SRM_RS10605 756dfbe2f05c9b4b96a32e132a0d5d6d 639 Pfam PF13432 Tetratricopeptide repeat 61 115 5.2E-5 T 22-04-2016 SRM_RS10605 756dfbe2f05c9b4b96a32e132a0d5d6d 639 Pfam PF13432 Tetratricopeptide repeat 354 389 0.0085 T 22-04-2016 SRM_RS10605 756dfbe2f05c9b4b96a32e132a0d5d6d 639 PANTHER PTHR23083 60 415 4.5E-16 T 22-04-2016 SRM_RS10605 756dfbe2f05c9b4b96a32e132a0d5d6d 639 PANTHER PTHR23083 547 624 4.5E-16 T 22-04-2016 SRM_RS10605 756dfbe2f05c9b4b96a32e132a0d5d6d 639 Gene3D G3DSA:1.25.40.10 521 619 2.1E-9 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 SRM_RS10605 756dfbe2f05c9b4b96a32e132a0d5d6d 639 Gene3D G3DSA:1.25.40.10 296 416 3.3E-5 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 SRM_RS10605 756dfbe2f05c9b4b96a32e132a0d5d6d 639 Gene3D G3DSA:1.25.40.10 457 473 3.3E-5 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 SRM_RS10605 756dfbe2f05c9b4b96a32e132a0d5d6d 639 SUPERFAMILY SSF48452 515 621 1.9E-12 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 SRM_RS10605 756dfbe2f05c9b4b96a32e132a0d5d6d 639 SUPERFAMILY SSF48452 120 381 1.9E-12 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 SRM_RS03910 59caf6f92e2cfdbb1e445b591ca71c6b 320 PANTHER PTHR22572:SF105 14 303 1.2E-163 T 22-04-2016 IPR005907 Glucose-1-phosphate thymidylyltransferase, short form GO:0008879|GO:0045226 KEGG: 00521+2.7.7.24|KEGG: 00523+2.7.7.24|MetaCyc: PWY-3221|MetaCyc: PWY-6808|MetaCyc: PWY-6942|MetaCyc: PWY-6953|MetaCyc: PWY-6973|MetaCyc: PWY-6974|MetaCyc: PWY-6976|MetaCyc: PWY-7104|MetaCyc: PWY-7301|MetaCyc: PWY-7312|MetaCyc: PWY-7315|MetaCyc: PWY-7316|MetaCyc: PWY-7318|MetaCyc: PWY-7413|MetaCyc: PWY-7414|MetaCyc: PWY-7440|MetaCyc: PWY-7657|MetaCyc: PWY-7688 SRM_RS03910 59caf6f92e2cfdbb1e445b591ca71c6b 320 Pfam PF00483 Nucleotidyl transferase 14 250 1.6E-66 T 22-04-2016 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 Reactome: REACT_17015 SRM_RS03910 59caf6f92e2cfdbb1e445b591ca71c6b 320 TIGRFAM TIGR01207 rmlA: glucose-1-phosphate thymidylyltransferase 14 298 1.2E-145 T 22-04-2016 IPR005907 Glucose-1-phosphate thymidylyltransferase, short form GO:0008879|GO:0045226 KEGG: 00521+2.7.7.24|KEGG: 00523+2.7.7.24|MetaCyc: PWY-3221|MetaCyc: PWY-6808|MetaCyc: PWY-6942|MetaCyc: PWY-6953|MetaCyc: PWY-6973|MetaCyc: PWY-6974|MetaCyc: PWY-6976|MetaCyc: PWY-7104|MetaCyc: PWY-7301|MetaCyc: PWY-7312|MetaCyc: PWY-7315|MetaCyc: PWY-7316|MetaCyc: PWY-7318|MetaCyc: PWY-7413|MetaCyc: PWY-7414|MetaCyc: PWY-7440|MetaCyc: PWY-7657|MetaCyc: PWY-7688 SRM_RS03910 59caf6f92e2cfdbb1e445b591ca71c6b 320 PANTHER PTHR22572 14 303 1.2E-163 T 22-04-2016 SRM_RS03910 59caf6f92e2cfdbb1e445b591ca71c6b 320 SUPERFAMILY SSF53448 13 298 1.46E-89 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases SRM_RS03910 59caf6f92e2cfdbb1e445b591ca71c6b 320 Gene3D G3DSA:3.90.550.10 13 276 2.1E-66 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases SRM_RS10215 083b478965aeb17459c0392d6952f1da 712 SUPERFAMILY SSF54791 559 638 2.49E-13 T 22-04-2016 IPR004088 K Homology domain, type 1 GO:0003723 SRM_RS10215 083b478965aeb17459c0392d6952f1da 712 Pfam PF03725 3' exoribonuclease family, domain 2 467 535 5.3E-8 T 22-04-2016 IPR015847 Exoribonuclease, phosphorolytic domain 2 Reactome: REACT_21257 SRM_RS10215 083b478965aeb17459c0392d6952f1da 712 Pfam PF03725 3' exoribonuclease family, domain 2 149 211 6.6E-17 T 22-04-2016 IPR015847 Exoribonuclease, phosphorolytic domain 2 Reactome: REACT_21257 SRM_RS10215 083b478965aeb17459c0392d6952f1da 712 Pfam PF00013 KH domain 564 623 1.4E-9 T 22-04-2016 IPR004088 K Homology domain, type 1 GO:0003723 SRM_RS10215 083b478965aeb17459c0392d6952f1da 712 SMART SM00322 559 627 5.0E-12 T 22-04-2016 IPR004087 K Homology domain GO:0003676 SRM_RS10215 083b478965aeb17459c0392d6952f1da 712 SUPERFAMILY SSF50249 618 702 2.06E-18 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold SRM_RS10215 083b478965aeb17459c0392d6952f1da 712 SUPERFAMILY SSF54211 300 495 3.04E-48 T 22-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold SRM_RS10215 083b478965aeb17459c0392d6952f1da 712 SUPERFAMILY SSF54211 14 145 3.64E-43 T 22-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold SRM_RS10215 083b478965aeb17459c0392d6952f1da 712 Gene3D G3DSA:1.10.10.400 234 321 2.2E-12 T 22-04-2016 IPR015848 Polyribonucleotide nucleotidyltransferase, RNA-binding domain GO:0000175|GO:0003723|GO:0006396 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 SRM_RS10215 083b478965aeb17459c0392d6952f1da 712 Gene3D G3DSA:3.30.1370.10 558 628 2.1E-20 T 22-04-2016 IPR004088 K Homology domain, type 1 GO:0003723 SRM_RS10215 083b478965aeb17459c0392d6952f1da 712 Pfam PF00575 S1 RNA binding domain 629 700 2.9E-13 T 22-04-2016 IPR003029 S1 domain GO:0003676 SRM_RS10215 083b478965aeb17459c0392d6952f1da 712 PANTHER PTHR11252 15 700 0.0 T 22-04-2016 IPR012162 Polyribonucleotide nucleotidyltransferase GO:0003723|GO:0004654|GO:0006402 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 SRM_RS10215 083b478965aeb17459c0392d6952f1da 712 SMART SM00316 630 700 2.3E-20 T 22-04-2016 IPR022967 RNA-binding domain, S1 SRM_RS10215 083b478965aeb17459c0392d6952f1da 712 SUPERFAMILY SSF46915 232 332 2.22E-14 T 22-04-2016 IPR015848 Polyribonucleotide nucleotidyltransferase, RNA-binding domain GO:0000175|GO:0003723|GO:0006396 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 SRM_RS10215 083b478965aeb17459c0392d6952f1da 712 PIRSF PIRSF005499 4 712 5.6E-275 T 22-04-2016 IPR012162 Polyribonucleotide nucleotidyltransferase GO:0003723|GO:0004654|GO:0006402 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 SRM_RS10215 083b478965aeb17459c0392d6952f1da 712 Pfam PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain 247 327 2.2E-7 T 22-04-2016 IPR015848 Polyribonucleotide nucleotidyltransferase, RNA-binding domain GO:0000175|GO:0003723|GO:0006396 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 SRM_RS10215 083b478965aeb17459c0392d6952f1da 712 TIGRFAM TIGR03591 polynuc_phos: polyribonucleotide nucleotidyltransferase 15 700 8.0E-293 T 22-04-2016 IPR012162 Polyribonucleotide nucleotidyltransferase GO:0003723|GO:0004654|GO:0006402 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 SRM_RS10215 083b478965aeb17459c0392d6952f1da 712 SUPERFAMILY SSF55666 457 555 3.37E-28 T 22-04-2016 IPR015847 Exoribonuclease, phosphorolytic domain 2 Reactome: REACT_21257 SRM_RS10215 083b478965aeb17459c0392d6952f1da 712 Pfam PF01138 3' exoribonuclease family, domain 1 331 463 1.1E-23 T 22-04-2016 IPR001247 Exoribonuclease, phosphorolytic domain 1 Reactome: REACT_21257 SRM_RS10215 083b478965aeb17459c0392d6952f1da 712 Pfam PF01138 3' exoribonuclease family, domain 1 16 145 1.3E-18 T 22-04-2016 IPR001247 Exoribonuclease, phosphorolytic domain 1 Reactome: REACT_21257 SRM_RS10215 083b478965aeb17459c0392d6952f1da 712 Hamap MF_01595 Polyribonucleotide nucleotidyltransferase [pnp]. 4 703 28.94 T 22-04-2016 IPR012162 Polyribonucleotide nucleotidyltransferase GO:0003723|GO:0004654|GO:0006402 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 SRM_RS10215 083b478965aeb17459c0392d6952f1da 712 SUPERFAMILY SSF55666 139 229 5.47E-25 T 22-04-2016 IPR015847 Exoribonuclease, phosphorolytic domain 2 Reactome: REACT_21257 SRM_RS10215 083b478965aeb17459c0392d6952f1da 712 Gene3D G3DSA:3.30.230.70 15 226 3.0E-80 T 22-04-2016 IPR027408 PNPase/RNase PH domain SRM_RS10215 083b478965aeb17459c0392d6952f1da 712 Gene3D G3DSA:3.30.230.70 322 550 6.0E-86 T 22-04-2016 IPR027408 PNPase/RNase PH domain SRM_RS10215 083b478965aeb17459c0392d6952f1da 712 Gene3D G3DSA:2.40.50.140 629 702 6.7E-21 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold SRM_RS14295 e778809c88f2aeea90d3c47abdb54235 325 Gene3D G3DSA:3.40.50.410 85 279 1.1E-29 T 22-04-2016 IPR002035 von Willebrand factor, type A SRM_RS14295 e778809c88f2aeea90d3c47abdb54235 325 PANTHER PTHR22550 1 314 1.9E-70 T 22-04-2016 SRM_RS14295 e778809c88f2aeea90d3c47abdb54235 325 SMART SM00327 86 284 4.1E-23 T 22-04-2016 IPR002035 von Willebrand factor, type A SRM_RS14295 e778809c88f2aeea90d3c47abdb54235 325 Pfam PF00092 von Willebrand factor type A domain 88 277 2.0E-30 T 22-04-2016 IPR002035 von Willebrand factor, type A SRM_RS14295 e778809c88f2aeea90d3c47abdb54235 325 PANTHER PTHR22550:SF8 1 314 1.9E-70 T 22-04-2016 SRM_RS14295 e778809c88f2aeea90d3c47abdb54235 325 Pfam PF07584 Aerotolerance regulator N-terminal 2 73 1.2E-11 T 22-04-2016 IPR024163 Aerotolerance regulator, N-terminal SRM_RS14295 e778809c88f2aeea90d3c47abdb54235 325 SUPERFAMILY SSF53300 85 280 2.23E-36 T 22-04-2016 IPR002035 von Willebrand factor, type A SRM_RS14295 e778809c88f2aeea90d3c47abdb54235 325 PRINTS PR00453 Von Willebrand factor type A domain signature 188 196 5.3E-7 T 22-04-2016 SRM_RS14295 e778809c88f2aeea90d3c47abdb54235 325 PRINTS PR00453 Von Willebrand factor type A domain signature 87 104 5.3E-7 T 22-04-2016 SRM_RS14295 e778809c88f2aeea90d3c47abdb54235 325 PRINTS PR00453 Von Willebrand factor type A domain signature 127 141 5.3E-7 T 22-04-2016 SRM_RS02465 de98cf0177f646f8701cb763e443d044 465 TIGRFAM TIGR03804 para_beta_helix: parallel beta-helix repeat 180 220 3.3E-5 T 22-04-2016 IPR022441 Parallel beta-helix repeat-2 SRM_RS02465 de98cf0177f646f8701cb763e443d044 465 TIGRFAM TIGR03804 para_beta_helix: parallel beta-helix repeat 294 337 5.7E-7 T 22-04-2016 IPR022441 Parallel beta-helix repeat-2 SRM_RS02465 de98cf0177f646f8701cb763e443d044 465 Gene3D G3DSA:2.160.20.10 24 341 8.5E-31 T 22-04-2016 IPR012334 Pectin lyase fold SRM_RS02465 de98cf0177f646f8701cb763e443d044 465 SMART SM00710 107 128 9.2 T 22-04-2016 IPR006626 Parallel beta-helix repeat SRM_RS02465 de98cf0177f646f8701cb763e443d044 465 SMART SM00710 278 299 690.0 T 22-04-2016 IPR006626 Parallel beta-helix repeat SRM_RS02465 de98cf0177f646f8701cb763e443d044 465 SMART SM00710 300 321 12.0 T 22-04-2016 IPR006626 Parallel beta-helix repeat SRM_RS02465 de98cf0177f646f8701cb763e443d044 465 SMART SM00710 79 106 800.0 T 22-04-2016 IPR006626 Parallel beta-helix repeat SRM_RS02465 de98cf0177f646f8701cb763e443d044 465 SMART SM00710 129 185 8100.0 T 22-04-2016 IPR006626 Parallel beta-helix repeat SRM_RS02465 de98cf0177f646f8701cb763e443d044 465 SMART SM00710 252 277 170.0 T 22-04-2016 IPR006626 Parallel beta-helix repeat SRM_RS02465 de98cf0177f646f8701cb763e443d044 465 SMART SM00710 230 251 2000.0 T 22-04-2016 IPR006626 Parallel beta-helix repeat SRM_RS02465 de98cf0177f646f8701cb763e443d044 465 SMART SM00710 208 229 1700.0 T 22-04-2016 IPR006626 Parallel beta-helix repeat SRM_RS02465 de98cf0177f646f8701cb763e443d044 465 SMART SM00710 186 207 0.78 T 22-04-2016 IPR006626 Parallel beta-helix repeat SRM_RS02465 de98cf0177f646f8701cb763e443d044 465 Pfam PF05048 Periplasmic copper-binding protein (NosD) 176 380 1.7E-45 T 22-04-2016 IPR007742 Periplasmic copper-binding protein NosD, beta helix domain SRM_RS02465 de98cf0177f646f8701cb763e443d044 465 SMART SM00722 175 320 0.044 T 22-04-2016 IPR006633 Carbohydrate-binding/sugar hydrolysis domain SRM_RS02465 de98cf0177f646f8701cb763e443d044 465 SMART SM00722 33 170 0.44 T 22-04-2016 IPR006633 Carbohydrate-binding/sugar hydrolysis domain SRM_RS02465 de98cf0177f646f8701cb763e443d044 465 SUPERFAMILY SSF51126 23 143 1.52E-53 T 22-04-2016 IPR011050 Pectin lyase fold/virulence factor SRM_RS02465 de98cf0177f646f8701cb763e443d044 465 SUPERFAMILY SSF51126 176 393 1.52E-53 T 22-04-2016 IPR011050 Pectin lyase fold/virulence factor SRM_RS12530 d5bde255d32b6b6eab067a6878e9b2c6 267 PIRSF PIRSF000728 1 263 3.8E-64 T 22-04-2016 IPR004662 Acetylglutamate kinase GO:0003991|GO:0005737|GO:0006526 KEGG: 00220+2.7.2.8|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 SRM_RS12530 d5bde255d32b6b6eab067a6878e9b2c6 267 TIGRFAM TIGR00761 argB: acetylglutamate kinase 9 248 3.3E-54 T 22-04-2016 IPR004662 Acetylglutamate kinase GO:0003991|GO:0005737|GO:0006526 KEGG: 00220+2.7.2.8|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 SRM_RS12530 d5bde255d32b6b6eab067a6878e9b2c6 267 Pfam PF00696 Amino acid kinase family 9 249 1.4E-36 T 22-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 SRM_RS12530 d5bde255d32b6b6eab067a6878e9b2c6 267 Gene3D G3DSA:3.40.1160.10 8 249 3.1E-61 T 22-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 SRM_RS12530 d5bde255d32b6b6eab067a6878e9b2c6 267 SUPERFAMILY SSF53633 7 256 3.14E-52 T 22-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 SRM_RS08775 00f0e559dd2a87c657383ed9bd1fe61d 302 PANTHER PTHR30349:SF5 13 263 1.0E-24 T 22-04-2016 SRM_RS08775 00f0e559dd2a87c657383ed9bd1fe61d 302 Pfam PF00589 Phage integrase family 109 260 8.1E-8 T 22-04-2016 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 SRM_RS08775 00f0e559dd2a87c657383ed9bd1fe61d 302 Pfam PF02899 Phage integrase, N-terminal SAM-like domain 6 81 2.4E-13 T 22-04-2016 IPR004107 Integrase, SAM-like, N-terminal GO:0003677|GO:0015074 SRM_RS08775 00f0e559dd2a87c657383ed9bd1fe61d 302 SUPERFAMILY SSF56349 6 260 1.5E-27 T 22-04-2016 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 SRM_RS08775 00f0e559dd2a87c657383ed9bd1fe61d 302 Gene3D G3DSA:1.10.443.10 109 268 9.6E-24 T 22-04-2016 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 SRM_RS08775 00f0e559dd2a87c657383ed9bd1fe61d 302 PANTHER PTHR30349 13 263 1.0E-24 T 22-04-2016 SRM_RS08775 00f0e559dd2a87c657383ed9bd1fe61d 302 Gene3D G3DSA:1.10.150.130 3 90 2.9E-18 T 22-04-2016 IPR023109 Integrase/recombinase, N-terminal SRM_RS01045 ec0fee0c71999b8eae8f58b969d3b5a7 664 ProSitePatterns PS01281 Glucose inhibited division protein A family signature 2. 372 395 - T 22-04-2016 IPR020595 MnmG-related, conserved site SRM_RS01045 ec0fee0c71999b8eae8f58b969d3b5a7 664 SUPERFAMILY SSF51905 98 265 3.95E-43 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SRM_RS01045 ec0fee0c71999b8eae8f58b969d3b5a7 664 SUPERFAMILY SSF51905 8 67 3.95E-43 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SRM_RS01045 ec0fee0c71999b8eae8f58b969d3b5a7 664 Gene3D G3DSA:3.50.50.60 8 176 7.3E-34 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SRM_RS01045 ec0fee0c71999b8eae8f58b969d3b5a7 664 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 9 31 1.0E-5 T 22-04-2016 SRM_RS01045 ec0fee0c71999b8eae8f58b969d3b5a7 664 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 154 163 1.0E-5 T 22-04-2016 SRM_RS01045 ec0fee0c71999b8eae8f58b969d3b5a7 664 ProSitePatterns PS01280 Glucose inhibited division protein A family signature 1. 277 291 - T 22-04-2016 IPR020595 MnmG-related, conserved site SRM_RS01045 ec0fee0c71999b8eae8f58b969d3b5a7 664 Pfam PF01134 Glucose inhibited division protein A 9 401 4.8E-154 T 22-04-2016 IPR002218 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG-related GO:0008033|GO:0050660 SRM_RS01045 ec0fee0c71999b8eae8f58b969d3b5a7 664 SMART SM01228 554 625 8.9E-36 T 22-04-2016 SRM_RS01045 ec0fee0c71999b8eae8f58b969d3b5a7 664 Hamap MF_00129 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG [mnmG]. 6 632 40.814 T 22-04-2016 IPR004416 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG GO:0002098 SRM_RS01045 ec0fee0c71999b8eae8f58b969d3b5a7 664 TIGRFAM TIGR00136 gidA: tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA 9 630 5.1E-249 T 22-04-2016 IPR004416 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG GO:0002098 SRM_RS01045 ec0fee0c71999b8eae8f58b969d3b5a7 664 Pfam PF13932 GidA associated domain 406 624 2.2E-66 T 22-04-2016 IPR026904 GidA associated domain 3 SRM_RS01045 ec0fee0c71999b8eae8f58b969d3b5a7 664 PANTHER PTHR11806:SF0 7 650 0.0 T 22-04-2016 SRM_RS01045 ec0fee0c71999b8eae8f58b969d3b5a7 664 PANTHER PTHR11806 7 650 0.0 T 22-04-2016 SRM_RS11890 acce744258a29f0ef84b9bad33bf3522 319 Pfam PF02219 Methylenetetrahydrofolate reductase 5 312 8.8E-63 T 22-04-2016 IPR003171 Methylenetetrahydrofolate reductase GO:0004489|GO:0006555|GO:0055114 KEGG: 00670+1.5.1.20|KEGG: 00720+1.5.1.20|MetaCyc: PWY-2201|MetaCyc: PWY-3841|UniPathway: UPA00193 SRM_RS11890 acce744258a29f0ef84b9bad33bf3522 319 TIGRFAM TIGR00676 fadh2: methylenetetrahydrofolate reductase [NAD(P)H] 15 313 1.8E-90 T 22-04-2016 IPR004620 5,10-methylenetetrahydrofolate reductase GO:0004489|GO:0005829|GO:0009086|GO:0055114 KEGG: 00670+1.5.1.20|KEGG: 00720+1.5.1.20|MetaCyc: PWY-2201|MetaCyc: PWY-3841|UniPathway: UPA00193 SRM_RS11890 acce744258a29f0ef84b9bad33bf3522 319 SUPERFAMILY SSF51730 2 312 2.16E-76 T 22-04-2016 IPR029041 FAD-linked oxidoreductase-like SRM_RS11890 acce744258a29f0ef84b9bad33bf3522 319 PANTHER PTHR21091 175 304 4.9E-30 T 22-04-2016 SRM_RS11890 acce744258a29f0ef84b9bad33bf3522 319 Gene3D G3DSA:3.20.20.220 2 313 1.0E-82 T 22-04-2016 IPR029041 FAD-linked oxidoreductase-like SRM_RS11890 acce744258a29f0ef84b9bad33bf3522 319 PANTHER PTHR21091:SF31 175 304 4.9E-30 T 22-04-2016 SRM_RS06565 b15ccbaf7794fc7853cfad7de48a03fe 156 PANTHER PTHR12934 1 154 4.7E-58 T 22-04-2016 IPR005749 Ribosomal protein L15, bacterial-type GO:0003735|GO:0006412|GO:0015934 SRM_RS06565 b15ccbaf7794fc7853cfad7de48a03fe 156 Pfam PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A 29 152 2.2E-36 T 22-04-2016 IPR021131 Ribosomal protein L18e/L15P SRM_RS06565 b15ccbaf7794fc7853cfad7de48a03fe 156 SUPERFAMILY SSF52080 5 154 5.76E-42 T 22-04-2016 IPR021131 Ribosomal protein L18e/L15P SRM_RS06565 b15ccbaf7794fc7853cfad7de48a03fe 156 Hamap MF_01341 50S ribosomal protein L15 [rplO]. 3 154 21.532 T 22-04-2016 IPR030878 Ribosomal protein L15 GO:0003735|GO:0006412|GO:0015934 SRM_RS06565 b15ccbaf7794fc7853cfad7de48a03fe 156 TIGRFAM TIGR01071 rplO_bact: ribosomal protein uL15 3 151 3.0E-43 T 22-04-2016 IPR005749 Ribosomal protein L15, bacterial-type GO:0003735|GO:0006412|GO:0015934 SRM_RS06565 b15ccbaf7794fc7853cfad7de48a03fe 156 Gene3D G3DSA:3.100.10.10 33 154 3.3E-32 T 22-04-2016 SRM_RS06565 b15ccbaf7794fc7853cfad7de48a03fe 156 ProSitePatterns PS00475 Ribosomal protein L15 signature. 118 148 - T 22-04-2016 IPR001196 Ribosomal protein L15, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 SRM_RS06450 82e204d16ac11165f96f4e658f485b15 124 Hamap MF_00403_B 30S ribosomal protein S12 [rpsL]. 1 123 39.454 T 22-04-2016 IPR005679 Ribosomal protein S12, bacteria GO:0003735|GO:0006412|GO:0015935 SRM_RS06450 82e204d16ac11165f96f4e658f485b15 124 Pfam PF00164 Ribosomal protein S12/S23 5 123 3.3E-44 T 22-04-2016 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SRM_RS06450 82e204d16ac11165f96f4e658f485b15 124 ProSitePatterns PS00055 Ribosomal protein S12 signature. 43 50 - T 22-04-2016 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SRM_RS06450 82e204d16ac11165f96f4e658f485b15 124 Gene3D G3DSA:2.40.50.140 2 123 8.5E-66 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold SRM_RS06450 82e204d16ac11165f96f4e658f485b15 124 SUPERFAMILY SSF50249 2 123 7.2E-53 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold SRM_RS06450 82e204d16ac11165f96f4e658f485b15 124 TIGRFAM TIGR00981 rpsL_bact: ribosomal protein uS12 2 123 8.2E-69 T 22-04-2016 IPR005679 Ribosomal protein S12, bacteria GO:0003735|GO:0006412|GO:0015935 SRM_RS06450 82e204d16ac11165f96f4e658f485b15 124 PIRSF PIRSF002133 1 124 1.0E-55 T 22-04-2016 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SRM_RS06450 82e204d16ac11165f96f4e658f485b15 124 PRINTS PR01034 Ribosomal protein S12 signature 58 77 2.1E-61 T 22-04-2016 IPR005679 Ribosomal protein S12, bacteria GO:0003735|GO:0006412|GO:0015935 SRM_RS06450 82e204d16ac11165f96f4e658f485b15 124 PRINTS PR01034 Ribosomal protein S12 signature 42 57 2.1E-61 T 22-04-2016 IPR005679 Ribosomal protein S12, bacteria GO:0003735|GO:0006412|GO:0015935 SRM_RS06450 82e204d16ac11165f96f4e658f485b15 124 PRINTS PR01034 Ribosomal protein S12 signature 77 94 2.1E-61 T 22-04-2016 IPR005679 Ribosomal protein S12, bacteria GO:0003735|GO:0006412|GO:0015935 SRM_RS06450 82e204d16ac11165f96f4e658f485b15 124 PRINTS PR01034 Ribosomal protein S12 signature 110 122 2.1E-61 T 22-04-2016 IPR005679 Ribosomal protein S12, bacteria GO:0003735|GO:0006412|GO:0015935 SRM_RS06450 82e204d16ac11165f96f4e658f485b15 124 PRINTS PR01034 Ribosomal protein S12 signature 27 42 2.1E-61 T 22-04-2016 IPR005679 Ribosomal protein S12, bacteria GO:0003735|GO:0006412|GO:0015935 SRM_RS06450 82e204d16ac11165f96f4e658f485b15 124 PRINTS PR01034 Ribosomal protein S12 signature 94 110 2.1E-61 T 22-04-2016 IPR005679 Ribosomal protein S12, bacteria GO:0003735|GO:0006412|GO:0015935 SRM_RS06450 82e204d16ac11165f96f4e658f485b15 124 PANTHER PTHR11652 2 116 6.0E-75 T 22-04-2016 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SRM_RS01385 de31bbc3671d421cd275452e66ab4fe0 480 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 105 214 3.8E-16 T 22-04-2016 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 SRM_RS01385 de31bbc3671d421cd275452e66ab4fe0 480 Gene3D G3DSA:1.10.540.10 104 218 3.1E-25 T 22-04-2016 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 SRM_RS01385 de31bbc3671d421cd275452e66ab4fe0 480 Gene3D G3DSA:1.20.140.10 314 476 7.0E-36 T 22-04-2016 SRM_RS01385 de31bbc3671d421cd275452e66ab4fe0 480 PANTHER PTHR10909 35 475 5.6E-163 T 22-04-2016 SRM_RS01385 de31bbc3671d421cd275452e66ab4fe0 480 SUPERFAMILY SSF56645 101 325 3.14E-54 T 22-04-2016 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain GO:0008152|GO:0016627|GO:0055114 SRM_RS01385 de31bbc3671d421cd275452e66ab4fe0 480 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 330 473 6.3E-28 T 22-04-2016 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 SRM_RS01385 de31bbc3671d421cd275452e66ab4fe0 480 Gene3D G3DSA:2.40.110.10 220 313 8.6E-27 T 22-04-2016 SRM_RS01385 de31bbc3671d421cd275452e66ab4fe0 480 PANTHER PTHR10909:SF280 35 475 5.6E-163 T 22-04-2016 SRM_RS01385 de31bbc3671d421cd275452e66ab4fe0 480 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 221 313 1.4E-18 T 22-04-2016 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0003995|GO:0055114 SRM_RS01385 de31bbc3671d421cd275452e66ab4fe0 480 SUPERFAMILY SSF47203 332 475 4.03E-34 T 22-04-2016 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 SRM_RS02285 64efd438d1edae1870895c08af474d00 226 PANTHER PTHR10683 1 213 1.3E-81 T 22-04-2016 IPR001585 Transaldolase/Fructose-6-phosphate aldolase GO:0005975 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|UniPathway: UPA00115 SRM_RS02285 64efd438d1edae1870895c08af474d00 226 TIGRFAM TIGR00875 fsa_talC_mipB: fructose-6-phosphate aldolase 1 213 1.7E-92 T 22-04-2016 IPR004731 Transaldolase type 3B/Fructose-6-phosphate aldolase GO:0005975 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|UniPathway: UPA00115 SRM_RS02285 64efd438d1edae1870895c08af474d00 226 ProSitePatterns PS01054 Transaldolase signature 1. 24 32 - T 22-04-2016 IPR018225 Transaldolase, active site GO:0005975 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|UniPathway: UPA00115 SRM_RS02285 64efd438d1edae1870895c08af474d00 226 Gene3D G3DSA:3.20.20.70 1 213 4.8E-72 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 SRM_RS02285 64efd438d1edae1870895c08af474d00 226 Hamap MF_00494 Probable transaldolase [tal]. 1 215 46.962 T 22-04-2016 IPR022999 Transaldolase type 3B, putative GO:0004801 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|UniPathway: UPA00115 SRM_RS02285 64efd438d1edae1870895c08af474d00 226 SUPERFAMILY SSF51569 1 213 1.05E-75 T 22-04-2016 SRM_RS02285 64efd438d1edae1870895c08af474d00 226 Pfam PF00923 Transaldolase 3 205 6.0E-60 T 22-04-2016 IPR001585 Transaldolase/Fructose-6-phosphate aldolase GO:0005975 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|UniPathway: UPA00115 SRM_RS02105 1ab1029e93744b716f829260a40a47f0 375 PANTHER PTHR22935 35 349 1.1E-49 T 22-04-2016 SRM_RS02105 1ab1029e93744b716f829260a40a47f0 375 Pfam PF00144 Beta-lactamase 44 352 2.9E-60 T 22-04-2016 IPR001466 Beta-lactamase-related SRM_RS02105 1ab1029e93744b716f829260a40a47f0 375 SUPERFAMILY SSF56601 31 365 1.08E-65 T 22-04-2016 IPR012338 Beta-lactamase/transpeptidase-like SRM_RS02105 1ab1029e93744b716f829260a40a47f0 375 Gene3D G3DSA:3.40.710.10 33 365 7.2E-70 T 22-04-2016 IPR012338 Beta-lactamase/transpeptidase-like SRM_RS13240 663c29ef7131b7541db72a6335f7af13 510 Gene3D G3DSA:2.30.38.10 349 404 1.6E-5 T 22-04-2016 SRM_RS13240 663c29ef7131b7541db72a6335f7af13 510 Gene3D G3DSA:3.40.50.980 196 330 9.2E-19 T 22-04-2016 SRM_RS13240 663c29ef7131b7541db72a6335f7af13 510 SUPERFAMILY SSF56801 58 468 2.75E-50 T 22-04-2016 SRM_RS13240 663c29ef7131b7541db72a6335f7af13 510 Pfam PF00501 AMP-binding enzyme 73 410 2.3E-28 T 22-04-2016 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 SRM_RS13240 663c29ef7131b7541db72a6335f7af13 510 PANTHER PTHR24096 75 413 5.4E-19 T 22-04-2016 SRM_RS13240 663c29ef7131b7541db72a6335f7af13 510 Gene3D G3DSA:3.40.50.980 62 129 4.2E-4 T 22-04-2016 SRM_RS13420 fa22cfacc9b4a084917ac509dc82056a 363 Pfam PF08402 TOBE domain 274 337 1.7E-9 T 22-04-2016 IPR013611 Transport-associated OB, type 2 GO:0005215|GO:0005524|GO:0006810|GO:0016820|GO:0043190 SRM_RS13420 fa22cfacc9b4a084917ac509dc82056a 363 PANTHER PTHR24220:SF282 7 255 1.9E-117 T 22-04-2016 SRM_RS13420 fa22cfacc9b4a084917ac509dc82056a 363 PANTHER PTHR24220 7 255 1.9E-117 T 22-04-2016 SRM_RS13420 fa22cfacc9b4a084917ac509dc82056a 363 ProSitePatterns PS00211 ABC transporters family signature. 140 154 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 SRM_RS13420 fa22cfacc9b4a084917ac509dc82056a 363 SUPERFAMILY SSF50331 260 339 3.74E-10 T 22-04-2016 IPR008995 Molybdate/tungstate binding, C-terminal SRM_RS13420 fa22cfacc9b4a084917ac509dc82056a 363 SMART SM00382 32 225 1.1E-13 T 22-04-2016 IPR003593 AAA+ ATPase domain SRM_RS13420 fa22cfacc9b4a084917ac509dc82056a 363 SUPERFAMILY SSF52540 5 247 6.19E-82 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SRM_RS13420 fa22cfacc9b4a084917ac509dc82056a 363 Gene3D G3DSA:3.40.50.300 2 240 6.6E-75 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SRM_RS13420 fa22cfacc9b4a084917ac509dc82056a 363 Pfam PF00005 ABC transporter 24 167 2.0E-33 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 SRM_RS15590 5444b0817a43b782241a00f28df9b593 112 Pfam PF00543 Nitrogen regulatory protein P-II 4 104 1.5E-20 T 22-04-2016 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 SRM_RS15590 5444b0817a43b782241a00f28df9b593 112 PANTHER PTHR30115 1 104 4.9E-21 T 22-04-2016 SRM_RS15590 5444b0817a43b782241a00f28df9b593 112 SMART SM00938 4 105 6.6E-27 T 22-04-2016 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 SRM_RS15590 5444b0817a43b782241a00f28df9b593 112 Gene3D G3DSA:3.30.70.120 1 110 4.1E-28 T 22-04-2016 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal SRM_RS15590 5444b0817a43b782241a00f28df9b593 112 ProSitePatterns PS00638 P-II protein C-terminal region signature. 83 96 - T 22-04-2016 IPR017918 Nitrogen regulatory protein PII, conserved site GO:0006808|GO:0030234 SRM_RS15590 5444b0817a43b782241a00f28df9b593 112 SUPERFAMILY SSF54913 1 110 1.91E-28 T 22-04-2016 IPR011322 Nitrogen regulatory PII-like, alpha/beta SRM_RS15590 5444b0817a43b782241a00f28df9b593 112 PRINTS PR00340 P-II protein signature 83 103 1.0E-19 T 22-04-2016 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 SRM_RS15590 5444b0817a43b782241a00f28df9b593 112 PRINTS PR00340 P-II protein signature 52 75 1.0E-19 T 22-04-2016 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 SRM_RS15590 5444b0817a43b782241a00f28df9b593 112 PRINTS PR00340 P-II protein signature 23 41 1.0E-19 T 22-04-2016 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 SRM_RS15590 5444b0817a43b782241a00f28df9b593 112 PRINTS PR00340 P-II protein signature 2 17 1.0E-19 T 22-04-2016 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 SRM_RS12455 759a70409734823b98efcc5a287f1df1 475 PIRSF PIRSF000204 1 471 1.1E-177 T 22-04-2016 IPR012136 NADP transhydrogenase, beta subunit GO:0008750|GO:0016021|GO:0050661|GO:0055114 KEGG: 00760+1.6.1.2 SRM_RS12455 759a70409734823b98efcc5a287f1df1 475 PANTHER PTHR10160:SF24 5 475 8.4E-218 T 22-04-2016 SRM_RS12455 759a70409734823b98efcc5a287f1df1 475 SUPERFAMILY SSF52467 297 471 5.72E-68 T 22-04-2016 IPR029035 DHS-like NAD/FAD-binding domain SRM_RS12455 759a70409734823b98efcc5a287f1df1 475 PANTHER PTHR10160 5 475 8.4E-218 T 22-04-2016 SRM_RS12455 759a70409734823b98efcc5a287f1df1 475 Gene3D G3DSA:3.40.50.1220 296 472 2.7E-80 T 22-04-2016 IPR029035 DHS-like NAD/FAD-binding domain SRM_RS12455 759a70409734823b98efcc5a287f1df1 475 Pfam PF02233 NAD(P) transhydrogenase beta subunit 7 467 6.0E-177 T 22-04-2016 IPR012136 NADP transhydrogenase, beta subunit GO:0008750|GO:0016021|GO:0050661|GO:0055114 KEGG: 00760+1.6.1.2 SRM_RS14155 8488afad92a17e04b5143b4e4a265757 346 PANTHER PTHR30518:SF2 2 344 4.3E-72 T 22-04-2016 SRM_RS14155 8488afad92a17e04b5143b4e4a265757 346 Gene3D G3DSA:3.30.160.60 305 341 1.1E-16 T 22-04-2016 IPR013087 Zinc finger C2H2-type/integrase DNA-binding domain GO:0003676 SRM_RS14155 8488afad92a17e04b5143b4e4a265757 346 Pfam PF02618 YceG-like family 42 331 6.9E-71 T 22-04-2016 IPR003770 Uncharacterised protein family UPF0755, YceG-like SRM_RS14155 8488afad92a17e04b5143b4e4a265757 346 TIGRFAM TIGR00247 TIGR00247: conserved hypothetical protein, YceG family 34 338 4.2E-59 T 22-04-2016 IPR003770 Uncharacterised protein family UPF0755, YceG-like SRM_RS14155 8488afad92a17e04b5143b4e4a265757 346 PANTHER PTHR30518 2 344 4.3E-72 T 22-04-2016 SRM_RS07120 5f807b79a1fef0cc78d7ecd80be1ebe3 223 Pfam PF13847 Methyltransferase domain 91 155 1.1E-9 T 22-04-2016 IPR025714 Methyltransferase domain SRM_RS07120 5f807b79a1fef0cc78d7ecd80be1ebe3 223 PANTHER PTHR13610 47 222 3.2E-57 T 22-04-2016 IPR026170 FAM173 family SRM_RS07120 5f807b79a1fef0cc78d7ecd80be1ebe3 223 Gene3D G3DSA:3.40.50.150 74 200 1.6E-24 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SRM_RS07120 5f807b79a1fef0cc78d7ecd80be1ebe3 223 SUPERFAMILY SSF53335 75 191 1.98E-30 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SRM_RS09650 1b4161054da53e05603a2e9c156e95fc 406 Pfam PF16125 Domain of unknown function (DUF4837) 58 388 2.2E-84 T 22-04-2016 IPR032286 Protein of unknown function DUF4837 SRM_RS04635 57e8ce5d862327ee38243bd725025973 317 SUPERFAMILY SSF144091 18 215 3.79E-35 T 22-04-2016 SRM_RS04635 57e8ce5d862327ee38243bd725025973 317 Gene3D G3DSA:1.20.1540.10 20 215 4.5E-33 T 22-04-2016 IPR022764 Peptidase S54, rhomboid domain GO:0004252|GO:0016021 SRM_RS04635 57e8ce5d862327ee38243bd725025973 317 Pfam PF01694 Rhomboid family 67 215 1.0E-27 T 22-04-2016 IPR022764 Peptidase S54, rhomboid domain GO:0004252|GO:0016021 SRM_RS04635 57e8ce5d862327ee38243bd725025973 317 PANTHER PTHR22936 26 215 3.6E-29 T 22-04-2016 IPR002610 Peptidase S54, rhomboid GO:0004252|GO:0006508|GO:0016021 SRM_RS07990 d3511f60296621937b3c4ac2832bae0a 234 Pfam PF14014 Protein of unknown function (DUF4230) 48 206 2.9E-16 T 22-04-2016 IPR025324 Protein of unknown function DUF4230 SRM_RS14600 eb8a7692b789e5298b41672d094908fe 156 Pfam PF13384 Homeodomain-like domain 23 70 2.6E-9 T 22-04-2016 SRM_RS14600 eb8a7692b789e5298b41672d094908fe 156 SUPERFAMILY SSF46689 18 134 1.16E-9 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 SRM_RS14600 eb8a7692b789e5298b41672d094908fe 156 Gene3D G3DSA:1.10.10.60 29 102 3.8E-5 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 SRM_RS00900 c85bf37eee572078c5d88c0d1ff53c1f 259 Gene3D G3DSA:3.40.1160.10 10 246 3.4E-78 T 22-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 SRM_RS00900 c85bf37eee572078c5d88c0d1ff53c1f 259 PANTHER PTHR21499:SF20 16 245 7.8E-109 T 22-04-2016 SRM_RS00900 c85bf37eee572078c5d88c0d1ff53c1f 259 PANTHER PTHR21499 16 245 7.8E-109 T 22-04-2016 SRM_RS00900 c85bf37eee572078c5d88c0d1ff53c1f 259 Pfam PF00696 Amino acid kinase family 17 225 4.1E-23 T 22-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 SRM_RS00900 c85bf37eee572078c5d88c0d1ff53c1f 259 TIGRFAM TIGR02075 pyrH_bact: UMP kinase 16 246 3.9E-94 T 22-04-2016 IPR015963 Uridylate kinase, bacteria GO:0005737|GO:0006221|GO:0033862 KEGG: 00240+2.7.4.22|UniPathway: UPA00159 SRM_RS00900 c85bf37eee572078c5d88c0d1ff53c1f 259 Hamap MF_01220_B Uridylate kinase [pyrH]. 13 246 42.639 T 22-04-2016 IPR015963 Uridylate kinase, bacteria GO:0005737|GO:0006221|GO:0033862 KEGG: 00240+2.7.4.22|UniPathway: UPA00159 SRM_RS00900 c85bf37eee572078c5d88c0d1ff53c1f 259 SUPERFAMILY SSF53633 15 246 2.75E-65 T 22-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 SRM_RS00900 c85bf37eee572078c5d88c0d1ff53c1f 259 PIRSF PIRSF005650 10 257 1.0E-91 T 22-04-2016 IPR011817 Uridylate kinase GO:0006221|GO:0009041 KEGG: 00240+2.7.4.22|UniPathway: UPA00159 SRM_RS03920 df6a69bc14ab832016d0f9aa1e1ff459 302 Pfam PF04321 RmlD substrate binding domain 8 291 3.1E-102 T 22-04-2016 IPR029903 RmlD-like substrate binding domain SRM_RS03920 df6a69bc14ab832016d0f9aa1e1ff459 302 PANTHER PTHR10491:SF4 1 298 5.6E-94 T 22-04-2016 SRM_RS03920 df6a69bc14ab832016d0f9aa1e1ff459 302 Gene3D G3DSA:3.40.50.720 7 238 5.2E-57 T 22-04-2016 IPR016040 NAD(P)-binding domain SRM_RS03920 df6a69bc14ab832016d0f9aa1e1ff459 302 TIGRFAM TIGR01214 rmlD: dTDP-4-dehydrorhamnose reductase 8 287 1.0E-93 T 22-04-2016 IPR005913 dTDP-4-dehydrorhamnose reductase family SRM_RS03920 df6a69bc14ab832016d0f9aa1e1ff459 302 SUPERFAMILY SSF51735 8 291 4.66E-93 T 22-04-2016 IPR016040 NAD(P)-binding domain SRM_RS03920 df6a69bc14ab832016d0f9aa1e1ff459 302 PANTHER PTHR10491 1 298 5.6E-94 T 22-04-2016 IPR005913 dTDP-4-dehydrorhamnose reductase family SRM_RS04650 c265587fac8a34ce02384ce14e085c2b 791 SUPERFAMILY SSF53955 100 314 4.22E-68 T 22-04-2016 IPR023346 Lysozyme-like domain SRM_RS04650 c265587fac8a34ce02384ce14e085c2b 791 Pfam PF00905 Penicillin binding protein transpeptidase domain 474 706 1.5E-29 T 22-04-2016 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 SRM_RS04650 c265587fac8a34ce02384ce14e085c2b 791 Gene3D G3DSA:1.10.3810.10 113 288 3.6E-68 T 22-04-2016 SRM_RS04650 c265587fac8a34ce02384ce14e085c2b 791 SUPERFAMILY SSF56601 269 291 3.52E-105 T 22-04-2016 IPR012338 Beta-lactamase/transpeptidase-like SRM_RS04650 c265587fac8a34ce02384ce14e085c2b 791 SUPERFAMILY SSF56601 321 383 3.52E-105 T 22-04-2016 IPR012338 Beta-lactamase/transpeptidase-like SRM_RS04650 c265587fac8a34ce02384ce14e085c2b 791 SUPERFAMILY SSF56601 467 774 3.52E-105 T 22-04-2016 IPR012338 Beta-lactamase/transpeptidase-like SRM_RS04650 c265587fac8a34ce02384ce14e085c2b 791 PANTHER PTHR32282:SF5 39 380 7.5E-180 T 22-04-2016 SRM_RS04650 c265587fac8a34ce02384ce14e085c2b 791 PANTHER PTHR32282:SF5 466 757 7.5E-180 T 22-04-2016 SRM_RS04650 c265587fac8a34ce02384ce14e085c2b 791 PANTHER PTHR32282 39 380 7.5E-180 T 22-04-2016 SRM_RS04650 c265587fac8a34ce02384ce14e085c2b 791 PANTHER PTHR32282 466 757 7.5E-180 T 22-04-2016 SRM_RS04650 c265587fac8a34ce02384ce14e085c2b 791 Gene3D G3DSA:3.40.710.10 289 383 1.1E-112 T 22-04-2016 IPR012338 Beta-lactamase/transpeptidase-like SRM_RS04650 c265587fac8a34ce02384ce14e085c2b 791 Gene3D G3DSA:3.40.710.10 465 767 1.1E-112 T 22-04-2016 IPR012338 Beta-lactamase/transpeptidase-like SRM_RS04650 c265587fac8a34ce02384ce14e085c2b 791 Pfam PF00912 Transglycosylase 112 287 4.9E-61 T 22-04-2016 IPR001264 Glycosyl transferase, family 51 UniPathway: UPA00219 SRM_RS11215 67e283868fa73578263c886a31fa191f 152 SUPERFAMILY SSF50324 35 96 9.29E-10 T 22-04-2016 IPR008162 Inorganic pyrophosphatase GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1|Reactome: REACT_21259|Reactome: REACT_71 SRM_RS11215 67e283868fa73578263c886a31fa191f 152 Gene3D G3DSA:3.90.80.10 46 85 2.4E-6 T 22-04-2016 IPR008162 Inorganic pyrophosphatase GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1|Reactome: REACT_21259|Reactome: REACT_71 SRM_RS02280 f6476547909b9b8540430635501f7c93 676 Pfam PF02780 Transketolase, C-terminal domain 560 666 6.3E-13 T 22-04-2016 IPR033248 Transketolase, C-terminal domain SRM_RS02280 f6476547909b9b8540430635501f7c93 676 Gene3D G3DSA:3.40.50.970 339 542 8.2E-76 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold SRM_RS02280 f6476547909b9b8540430635501f7c93 676 Gene3D G3DSA:3.40.50.920 549 674 7.9E-50 T 22-04-2016 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 SRM_RS02280 f6476547909b9b8540430635501f7c93 676 SUPERFAMILY SSF52518 354 537 7.59E-67 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold SRM_RS02280 f6476547909b9b8540430635501f7c93 676 Pfam PF00456 Transketolase, thiamine diphosphate binding domain 12 344 1.3E-152 T 22-04-2016 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560|UniPathway: UPA00064 SRM_RS02280 f6476547909b9b8540430635501f7c93 676 SUPERFAMILY SSF52922 544 674 1.57E-42 T 22-04-2016 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 SRM_RS02280 f6476547909b9b8540430635501f7c93 676 SMART SM00861 364 535 5.8E-69 T 22-04-2016 IPR005475 Transketolase-like, pyrimidine-binding domain SRM_RS02280 f6476547909b9b8540430635501f7c93 676 PANTHER PTHR11624 8 318 0.0 T 22-04-2016 IPR033247 Transketolase family SRM_RS02280 f6476547909b9b8540430635501f7c93 676 PANTHER PTHR11624 347 676 0.0 T 22-04-2016 IPR033247 Transketolase family SRM_RS02280 f6476547909b9b8540430635501f7c93 676 SUPERFAMILY SSF52518 6 330 1.68E-117 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold SRM_RS02280 f6476547909b9b8540430635501f7c93 676 ProSitePatterns PS00801 Transketolase signature 1. 20 40 - T 22-04-2016 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560|UniPathway: UPA00064 SRM_RS02280 f6476547909b9b8540430635501f7c93 676 Pfam PF02779 Transketolase, pyrimidine binding domain 363 534 8.1E-46 T 22-04-2016 IPR005475 Transketolase-like, pyrimidine-binding domain SRM_RS02280 f6476547909b9b8540430635501f7c93 676 TIGRFAM TIGR00232 tktlase_bact: transketolase 14 673 4.7E-272 T 22-04-2016 IPR005478 Transketolase, bacterial-like GO:0004802 KEGG: 00030+2.2.1.1|KEGG: 00710+2.2.1.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|MetaCyc: PWY-6901 SRM_RS02280 f6476547909b9b8540430635501f7c93 676 PANTHER PTHR11624:SF1 8 318 0.0 T 22-04-2016 SRM_RS02280 f6476547909b9b8540430635501f7c93 676 PANTHER PTHR11624:SF1 347 676 0.0 T 22-04-2016 SRM_RS02280 f6476547909b9b8540430635501f7c93 676 Gene3D G3DSA:3.40.50.970 8 329 1.7E-129 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold SRM_RS08535 d0dfc3a470a02534d3b359905a7fdc5d 529 PANTHER PTHR12083 11 379 1.2E-100 T 22-04-2016 SRM_RS08535 d0dfc3a470a02534d3b359905a7fdc5d 529 PANTHER PTHR12083 408 507 1.2E-100 T 22-04-2016 SRM_RS08535 d0dfc3a470a02534d3b359905a7fdc5d 529 Gene3D G3DSA:3.40.50.300 344 525 6.7E-21 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SRM_RS08535 d0dfc3a470a02534d3b359905a7fdc5d 529 Gene3D G3DSA:3.90.1200.10 158 285 2.0E-5 T 22-04-2016 SRM_RS08535 d0dfc3a470a02534d3b359905a7fdc5d 529 SUPERFAMILY SSF52540 344 477 1.05E-21 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SRM_RS08535 d0dfc3a470a02534d3b359905a7fdc5d 529 Pfam PF13671 AAA domain 346 496 8.0E-24 T 22-04-2016 SRM_RS08535 d0dfc3a470a02534d3b359905a7fdc5d 529 SUPERFAMILY SSF56112 30 285 1.19E-12 T 22-04-2016 IPR011009 Protein kinase-like domain SRM_RS08535 d0dfc3a470a02534d3b359905a7fdc5d 529 PANTHER PTHR12083:SF8 11 379 1.2E-100 T 22-04-2016 SRM_RS08535 d0dfc3a470a02534d3b359905a7fdc5d 529 PANTHER PTHR12083:SF8 408 507 1.2E-100 T 22-04-2016 SRM_RS03385 849e1998e737d6e2bc7461a59ead689c 565 TIGRFAM TIGR01695 murJ_mviN: murein biosynthesis integral membrane protein MurJ 26 451 7.4E-80 T 22-04-2016 IPR004268 Peptidoglycan biosynthesis protein MurJ SRM_RS03385 849e1998e737d6e2bc7461a59ead689c 565 PANTHER PTHR11206 463 513 7.3E-22 T 22-04-2016 SRM_RS03385 849e1998e737d6e2bc7461a59ead689c 565 PANTHER PTHR11206 6 21 7.3E-22 T 22-04-2016 SRM_RS03385 849e1998e737d6e2bc7461a59ead689c 565 PANTHER PTHR11206 263 445 7.3E-22 T 22-04-2016 SRM_RS03385 849e1998e737d6e2bc7461a59ead689c 565 PRINTS PR01806 Virulence factor MviN signature 301 327 4.8E-38 T 22-04-2016 IPR004268 Peptidoglycan biosynthesis protein MurJ SRM_RS03385 849e1998e737d6e2bc7461a59ead689c 565 PRINTS PR01806 Virulence factor MviN signature 184 205 4.8E-38 T 22-04-2016 IPR004268 Peptidoglycan biosynthesis protein MurJ SRM_RS03385 849e1998e737d6e2bc7461a59ead689c 565 PRINTS PR01806 Virulence factor MviN signature 398 417 4.8E-38 T 22-04-2016 IPR004268 Peptidoglycan biosynthesis protein MurJ SRM_RS03385 849e1998e737d6e2bc7461a59ead689c 565 PRINTS PR01806 Virulence factor MviN signature 469 486 4.8E-38 T 22-04-2016 IPR004268 Peptidoglycan biosynthesis protein MurJ SRM_RS03385 849e1998e737d6e2bc7461a59ead689c 565 PRINTS PR01806 Virulence factor MviN signature 50 69 4.8E-38 T 22-04-2016 IPR004268 Peptidoglycan biosynthesis protein MurJ SRM_RS03385 849e1998e737d6e2bc7461a59ead689c 565 PRINTS PR01806 Virulence factor MviN signature 69 85 4.8E-38 T 22-04-2016 IPR004268 Peptidoglycan biosynthesis protein MurJ SRM_RS03385 849e1998e737d6e2bc7461a59ead689c 565 PRINTS PR01806 Virulence factor MviN signature 160 184 4.8E-38 T 22-04-2016 IPR004268 Peptidoglycan biosynthesis protein MurJ SRM_RS03385 849e1998e737d6e2bc7461a59ead689c 565 Pfam PF03023 MviN-like protein 45 451 1.8E-77 T 22-04-2016 IPR004268 Peptidoglycan biosynthesis protein MurJ SRM_RS03385 849e1998e737d6e2bc7461a59ead689c 565 PANTHER PTHR11206:SF90 463 513 7.3E-22 T 22-04-2016 SRM_RS03385 849e1998e737d6e2bc7461a59ead689c 565 PANTHER PTHR11206:SF90 6 21 7.3E-22 T 22-04-2016 SRM_RS03385 849e1998e737d6e2bc7461a59ead689c 565 PANTHER PTHR11206:SF90 263 445 7.3E-22 T 22-04-2016 SRM_RS04730 20df7c37b7a855108f70c1c64217ec81 236 Gene3D G3DSA:2.40.30.10 6 99 5.7E-21 T 22-04-2016 SRM_RS04730 20df7c37b7a855108f70c1c64217ec81 236 Pfam PF00970 Oxidoreductase FAD-binding domain 8 101 1.0E-12 T 22-04-2016 IPR008333 Oxidoreductase, FAD-binding domain SRM_RS04730 20df7c37b7a855108f70c1c64217ec81 236 SUPERFAMILY SSF52343 92 229 7.73E-31 T 22-04-2016 SRM_RS04730 20df7c37b7a855108f70c1c64217ec81 236 PANTHER PTHR19370 9 231 7.1E-45 T 22-04-2016 SRM_RS04730 20df7c37b7a855108f70c1c64217ec81 236 SUPERFAMILY SSF63380 5 104 1.62E-24 T 22-04-2016 IPR017938 Riboflavin synthase-like beta-barrel GO:0016491|GO:0055114 SRM_RS04730 20df7c37b7a855108f70c1c64217ec81 236 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 77 86 3.7E-14 T 22-04-2016 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 SRM_RS04730 20df7c37b7a855108f70c1c64217ec81 236 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 111 130 3.7E-14 T 22-04-2016 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 SRM_RS04730 20df7c37b7a855108f70c1c64217ec81 236 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 35 45 3.7E-14 T 22-04-2016 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 SRM_RS04730 20df7c37b7a855108f70c1c64217ec81 236 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 147 158 3.7E-14 T 22-04-2016 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 SRM_RS04730 20df7c37b7a855108f70c1c64217ec81 236 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 135 144 3.7E-14 T 22-04-2016 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 SRM_RS04730 20df7c37b7a855108f70c1c64217ec81 236 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 199 207 3.7E-14 T 22-04-2016 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 SRM_RS04730 20df7c37b7a855108f70c1c64217ec81 236 PRINTS PR00406 Cytochrome B5 reductase signature 199 207 2.7E-11 T 22-04-2016 IPR001834 NADH:cytochrome b5 reductase (CBR) GO:0016491|GO:0055114 SRM_RS04730 20df7c37b7a855108f70c1c64217ec81 236 PRINTS PR00406 Cytochrome B5 reductase signature 147 158 2.7E-11 T 22-04-2016 IPR001834 NADH:cytochrome b5 reductase (CBR) GO:0016491|GO:0055114 SRM_RS04730 20df7c37b7a855108f70c1c64217ec81 236 PRINTS PR00406 Cytochrome B5 reductase signature 54 61 2.7E-11 T 22-04-2016 IPR001834 NADH:cytochrome b5 reductase (CBR) GO:0016491|GO:0055114 SRM_RS04730 20df7c37b7a855108f70c1c64217ec81 236 PRINTS PR00406 Cytochrome B5 reductase signature 89 103 2.7E-11 T 22-04-2016 IPR001834 NADH:cytochrome b5 reductase (CBR) GO:0016491|GO:0055114 SRM_RS04730 20df7c37b7a855108f70c1c64217ec81 236 PRINTS PR00406 Cytochrome B5 reductase signature 33 44 2.7E-11 T 22-04-2016 IPR001834 NADH:cytochrome b5 reductase (CBR) GO:0016491|GO:0055114 SRM_RS04730 20df7c37b7a855108f70c1c64217ec81 236 PRINTS PR00406 Cytochrome B5 reductase signature 111 130 2.7E-11 T 22-04-2016 IPR001834 NADH:cytochrome b5 reductase (CBR) GO:0016491|GO:0055114 SRM_RS04730 20df7c37b7a855108f70c1c64217ec81 236 Pfam PF00175 Oxidoreductase NAD-binding domain 112 211 9.3E-19 T 22-04-2016 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 SRM_RS04730 20df7c37b7a855108f70c1c64217ec81 236 Gene3D G3DSA:3.40.50.80 105 232 4.2E-33 T 22-04-2016 SRM_RS06560 50f5e937d37c32007287dcad859461d1 175 Hamap MF_01307_B 30S ribosomal protein S5 [rpsE]. 1 171 33.594 T 22-04-2016 IPR005712 Ribosomal protein S5, bacterial-type GO:0003735|GO:0006412|GO:0015935 SRM_RS06560 50f5e937d37c32007287dcad859461d1 175 SUPERFAMILY SSF54211 87 166 6.57E-25 T 22-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold SRM_RS06560 50f5e937d37c32007287dcad859461d1 175 Gene3D G3DSA:3.30.230.10 83 166 4.6E-32 T 22-04-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup SRM_RS06560 50f5e937d37c32007287dcad859461d1 175 PANTHER PTHR13718 17 170 2.2E-57 T 22-04-2016 IPR000851 Ribosomal protein S5 GO:0003735|GO:0005840|GO:0006412 SRM_RS06560 50f5e937d37c32007287dcad859461d1 175 Gene3D G3DSA:3.30.160.20 17 81 3.3E-26 T 22-04-2016 IPR014720 Double-stranded RNA-binding domain SRM_RS06560 50f5e937d37c32007287dcad859461d1 175 Pfam PF03719 Ribosomal protein S5, C-terminal domain 95 165 4.6E-29 T 22-04-2016 IPR005324 Ribosomal protein S5, C-terminal GO:0003735|GO:0005840|GO:0006412 SRM_RS06560 50f5e937d37c32007287dcad859461d1 175 Pfam PF00333 Ribosomal protein S5, N-terminal domain 20 83 1.8E-25 T 22-04-2016 IPR013810 Ribosomal protein S5, N-terminal GO:0003723|GO:0003735|GO:0005840|GO:0006412 SRM_RS06560 50f5e937d37c32007287dcad859461d1 175 SUPERFAMILY SSF54768 16 84 1.03E-20 T 22-04-2016 SRM_RS06560 50f5e937d37c32007287dcad859461d1 175 ProSitePatterns PS00585 Ribosomal protein S5 signature. 36 68 - T 22-04-2016 IPR018192 Ribosomal protein S5, N-terminal, conserved site SRM_RS06560 50f5e937d37c32007287dcad859461d1 175 TIGRFAM TIGR01021 rpsE_bact: ribosomal protein uS5 17 170 4.7E-65 T 22-04-2016 IPR005712 Ribosomal protein S5, bacterial-type GO:0003735|GO:0006412|GO:0015935 SRM_RS01475 7c0de407fb123feb71281dffca8616e7 148 PANTHER PTHR11049 17 144 9.6E-58 T 22-04-2016 SRM_RS01475 7c0de407fb123feb71281dffca8616e7 148 PANTHER PTHR11049:SF8 17 144 9.6E-58 T 22-04-2016 SRM_RS01475 7c0de407fb123feb71281dffca8616e7 148 Pfam PF03061 Thioesterase superfamily 36 107 5.7E-18 T 22-04-2016 IPR006683 Thioesterase domain SRM_RS01475 7c0de407fb123feb71281dffca8616e7 148 Gene3D G3DSA:3.10.129.10 16 133 1.1E-37 T 22-04-2016 IPR029069 HotDog domain SRM_RS01475 7c0de407fb123feb71281dffca8616e7 148 SUPERFAMILY SSF54637 19 144 3.9E-36 T 22-04-2016 IPR029069 HotDog domain SRM_RS04405 abbed196777b7d8c774ded7338861846 95 PANTHER PTHR33571 1 95 1.8E-29 T 22-04-2016 SRM_RS04405 abbed196777b7d8c774ded7338861846 95 SUPERFAMILY SSF81301 6 93 1.57E-22 T 22-04-2016 SRM_RS04405 abbed196777b7d8c774ded7338861846 95 Gene3D G3DSA:3.30.460.10 3 93 2.5E-28 T 22-04-2016 SRM_RS04405 abbed196777b7d8c774ded7338861846 95 Pfam PF01909 Nucleotidyltransferase domain 11 92 5.9E-14 T 22-04-2016 IPR002934 Polymerase, nucleotidyl transferase domain GO:0016779 SRM_RS13175 45d4e55e51532e20fdd3740d3c9d127e 223 PRINTS PR00773 GrpE protein signature 163 178 4.0E-23 T 22-04-2016 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 SRM_RS13175 45d4e55e51532e20fdd3740d3c9d127e 223 PRINTS PR00773 GrpE protein signature 102 117 4.0E-23 T 22-04-2016 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 SRM_RS13175 45d4e55e51532e20fdd3740d3c9d127e 223 PRINTS PR00773 GrpE protein signature 74 90 4.0E-23 T 22-04-2016 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 SRM_RS13175 45d4e55e51532e20fdd3740d3c9d127e 223 PRINTS PR00773 GrpE protein signature 190 209 4.0E-23 T 22-04-2016 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 SRM_RS13175 45d4e55e51532e20fdd3740d3c9d127e 223 Hamap MF_01151 Protein GrpE [grpE]. 23 211 19.13 T 22-04-2016 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 SRM_RS13175 45d4e55e51532e20fdd3740d3c9d127e 223 PANTHER PTHR21237 21 214 4.1E-52 T 22-04-2016 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 SRM_RS13175 45d4e55e51532e20fdd3740d3c9d127e 223 SUPERFAMILY SSF58014 51 155 9.68E-21 T 22-04-2016 SRM_RS13175 45d4e55e51532e20fdd3740d3c9d127e 223 SUPERFAMILY SSF51064 156 211 1.44E-17 T 22-04-2016 IPR009012 GrpE nucleotide exchange factor, head GO:0006457 SRM_RS13175 45d4e55e51532e20fdd3740d3c9d127e 223 Pfam PF01025 GrpE 43 210 2.5E-50 T 22-04-2016 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 SRM_RS13175 45d4e55e51532e20fdd3740d3c9d127e 223 ProSitePatterns PS01071 grpE protein signature. 166 209 - T 22-04-2016 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 SRM_RS13175 45d4e55e51532e20fdd3740d3c9d127e 223 Gene3D G3DSA:2.30.22.10 155 212 6.2E-26 T 22-04-2016 IPR009012 GrpE nucleotide exchange factor, head GO:0006457 SRM_RS13175 45d4e55e51532e20fdd3740d3c9d127e 223 Gene3D G3DSA:3.90.20.20 48 152 4.7E-22 T 22-04-2016 IPR013805 GrpE nucleotide exchange factor, coiled-coil SRM_RS14230 367e2952034fa9fdd92041bfe7e1311c 728 TIGRFAM TIGR02397 dnaX_nterm: DNA polymerase III, subunit gamma and tau 6 365 7.3E-131 T 22-04-2016 IPR012763 DNA polymerase III, subunit gamma/ tau GO:0003887|GO:0005524|GO:0006260|GO:0009360 SRM_RS14230 367e2952034fa9fdd92041bfe7e1311c 728 Gene3D G3DSA:1.10.8.60 175 250 3.2E-28 T 22-04-2016 SRM_RS14230 367e2952034fa9fdd92041bfe7e1311c 728 SMART SM00382 40 187 7.8E-10 T 22-04-2016 IPR003593 AAA+ ATPase domain SRM_RS14230 367e2952034fa9fdd92041bfe7e1311c 728 SUPERFAMILY SSF52540 38 228 2.41E-58 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SRM_RS14230 367e2952034fa9fdd92041bfe7e1311c 728 Pfam PF13177 DNA polymerase III, delta subunit 24 186 4.1E-45 T 22-04-2016 SRM_RS14230 367e2952034fa9fdd92041bfe7e1311c 728 SUPERFAMILY SSF48019 252 370 4.0E-22 T 22-04-2016 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal GO:0003677|GO:0006260 Reactome: REACT_152|Reactome: REACT_1538|Reactome: REACT_216|Reactome: REACT_22172|Reactome: REACT_383 SRM_RS14230 367e2952034fa9fdd92041bfe7e1311c 728 PANTHER PTHR11669 1 424 2.7E-159 T 22-04-2016 SRM_RS14230 367e2952034fa9fdd92041bfe7e1311c 728 Gene3D G3DSA:1.20.272.10 251 369 4.2E-18 T 22-04-2016 SRM_RS14230 367e2952034fa9fdd92041bfe7e1311c 728 PANTHER PTHR11669:SF0 1 424 2.7E-159 T 22-04-2016 SRM_RS14230 367e2952034fa9fdd92041bfe7e1311c 728 Gene3D G3DSA:3.40.50.300 18 174 2.7E-67 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SRM_RS14230 367e2952034fa9fdd92041bfe7e1311c 728 Pfam PF12169 DNA polymerase III subunits gamma and tau domain III 247 372 2.2E-19 T 22-04-2016 IPR022754 DNA polymerase III, gamma subunit, domain III GO:0003887 SRM_RS08000 61644abdbf00efa5ab7baf68a6b8013c 225 Gene3D G3DSA:3.40.50.1240 14 218 2.5E-52 T 22-04-2016 IPR029033 Histidine phosphatase superfamily SRM_RS08000 61644abdbf00efa5ab7baf68a6b8013c 225 PIRSF PIRSF000709 10 215 1.5E-14 T 22-04-2016 SRM_RS08000 61644abdbf00efa5ab7baf68a6b8013c 225 Pfam PF00300 Histidine phosphatase superfamily (branch 1) 16 213 6.6E-55 T 22-04-2016 IPR013078 Histidine phosphatase superfamily, clade-1 SRM_RS08000 61644abdbf00efa5ab7baf68a6b8013c 225 SMART SM00855 15 172 1.2E-23 T 22-04-2016 IPR013078 Histidine phosphatase superfamily, clade-1 SRM_RS08000 61644abdbf00efa5ab7baf68a6b8013c 225 SUPERFAMILY SSF53254 13 217 1.7E-50 T 22-04-2016 IPR029033 Histidine phosphatase superfamily SRM_RS08000 61644abdbf00efa5ab7baf68a6b8013c 225 PANTHER PTHR23029 10 216 7.0E-45 T 22-04-2016 SRM_RS08000 61644abdbf00efa5ab7baf68a6b8013c 225 ProSitePatterns PS00175 Phosphoglycerate mutase family phosphohistidine signature. 18 27 - T 22-04-2016 IPR001345 Phosphoglycerate/bisphosphoglycerate mutase, active site GO:0003824|GO:0008152 UniPathway: UPA00109 SRM_RS10375 4af91372e74280c54e0d8f1fb559747a 468 Gene3D G3DSA:3.40.350.10 4 172 6.4E-28 T 22-04-2016 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal SRM_RS10375 4af91372e74280c54e0d8f1fb559747a 468 SUPERFAMILY SSF53092 2 169 2.51E-28 T 22-04-2016 IPR028980 Creatinase/Aminopeptidase P, N-terminal SRM_RS10375 4af91372e74280c54e0d8f1fb559747a 468 Gene3D G3DSA:3.90.230.10 173 449 9.4E-62 T 22-04-2016 IPR000994 Peptidase M24, structural domain SRM_RS10375 4af91372e74280c54e0d8f1fb559747a 468 Pfam PF00557 Metallopeptidase family M24 176 441 1.4E-44 T 22-04-2016 IPR000994 Peptidase M24, structural domain SRM_RS10375 4af91372e74280c54e0d8f1fb559747a 468 Pfam PF05195 Aminopeptidase P, N-terminal domain 7 119 2.4E-19 T 22-04-2016 IPR007865 Aminopeptidase P, N-terminal GO:0004177|GO:0030145 SRM_RS10375 4af91372e74280c54e0d8f1fb559747a 468 PANTHER PTHR10804:SF100 5 358 2.9E-94 T 22-04-2016 SRM_RS10375 4af91372e74280c54e0d8f1fb559747a 468 PANTHER PTHR10804:SF100 375 458 2.9E-94 T 22-04-2016 SRM_RS10375 4af91372e74280c54e0d8f1fb559747a 468 PANTHER PTHR10804 5 358 2.9E-94 T 22-04-2016 SRM_RS10375 4af91372e74280c54e0d8f1fb559747a 468 PANTHER PTHR10804 375 458 2.9E-94 T 22-04-2016 SRM_RS10375 4af91372e74280c54e0d8f1fb559747a 468 SUPERFAMILY SSF55920 170 455 3.01E-59 T 22-04-2016 IPR000994 Peptidase M24, structural domain SRM_RS10375 4af91372e74280c54e0d8f1fb559747a 468 SMART SM01011 2 136 2.3E-29 T 22-04-2016 IPR007865 Aminopeptidase P, N-terminal GO:0004177|GO:0030145 SRM_RS08635 144d636d9173d5164c2711a2949eec49 269 SUPERFAMILY SSF48576 15 268 4.17E-25 T 22-04-2016 IPR008949 Isoprenoid synthase domain SRM_RS08635 144d636d9173d5164c2711a2949eec49 269 Gene3D G3DSA:1.10.600.10 25 264 6.3E-14 T 22-04-2016 IPR008949 Isoprenoid synthase domain SRM_RS08635 144d636d9173d5164c2711a2949eec49 269 Pfam PF00494 Squalene/phytoene synthase 62 254 3.4E-17 T 22-04-2016 IPR002060 Squalene/phytoene synthase GO:0009058|GO:0016740 SRM_RS06940 4887313c57b1113c4387d8cf42abea4f 504 Gene3D G3DSA:3.90.1150.10 312 459 5.2E-37 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 SRM_RS06940 4887313c57b1113c4387d8cf42abea4f 504 Pfam PF00266 Aminotransferase class-V 49 448 1.0E-72 T 22-04-2016 IPR000192 Aminotransferase class V domain SRM_RS06940 4887313c57b1113c4387d8cf42abea4f 504 Gene3D G3DSA:3.40.640.10 63 311 1.7E-61 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 SRM_RS06940 4887313c57b1113c4387d8cf42abea4f 504 PANTHER PTHR11601 48 493 2.3E-86 T 22-04-2016 SRM_RS06940 4887313c57b1113c4387d8cf42abea4f 504 SUPERFAMILY SSF53383 43 457 4.78E-84 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase SRM_RS08765 3716c95003bc663a0254fd7bdb379751 212 SUPERFAMILY SSF102198 2 207 6.41E-56 T 22-04-2016 SRM_RS08765 3716c95003bc663a0254fd7bdb379751 212 Gene3D G3DSA:3.50.30.50 2 207 4.0E-57 T 22-04-2016 SRM_RS08765 3716c95003bc663a0254fd7bdb379751 212 PANTHER PTHR31118 3 206 8.2E-55 T 22-04-2016 SRM_RS08765 3716c95003bc663a0254fd7bdb379751 212 Hamap MF_01969 Kynurenine formamidase [kynB]. 2 209 40.049 T 22-04-2016 IPR017484 Kynurenine formamidase, bacteria GO:0004328|GO:0019441 KEGG: 00380+3.5.1.9|KEGG: 00630+3.5.1.9|MetaCyc: PWY-5651|MetaCyc: PWY-6309|MetaCyc: PWY-7717|MetaCyc: PWY-7733|MetaCyc: PWY-7734|UniPathway: UPA00333 SRM_RS08765 3716c95003bc663a0254fd7bdb379751 212 Pfam PF04199 Putative cyclase 4 152 3.8E-21 T 22-04-2016 IPR007325 Kynurenine formamidase GO:0004061|GO:0019441 KEGG: 00380+3.5.1.9|KEGG: 00630+3.5.1.9|MetaCyc: PWY-5651|MetaCyc: PWY-6309|MetaCyc: PWY-7717|MetaCyc: PWY-7733|MetaCyc: PWY-7734|UniPathway: UPA00333 SRM_RS02590 d123a0ea8d001d7d4ba5f9770ba07ed7 192 SUPERFAMILY SSF75169 107 190 3.03E-17 T 22-04-2016 IPR027396 DsrEFH-like SRM_RS02590 d123a0ea8d001d7d4ba5f9770ba07ed7 192 Gene3D G3DSA:3.40.1260.10 113 190 4.7E-14 T 22-04-2016 IPR027396 DsrEFH-like SRM_RS02590 d123a0ea8d001d7d4ba5f9770ba07ed7 192 Pfam PF02635 DsrE/DsrF-like family 78 191 8.1E-7 T 22-04-2016 IPR003787 Sulphur relay, DsrE/F-like protein SRM_RS10795 817306800b717d5982a14a09b423b6de 842 Pfam PF13620 Carboxypeptidase regulatory-like domain 69 145 1.7E-20 T 22-04-2016 SRM_RS10795 817306800b717d5982a14a09b423b6de 842 Gene3D G3DSA:2.60.40.1120 69 145 2.1E-19 T 22-04-2016 IPR014766 Carboxypeptidase, regulatory domain SRM_RS10795 817306800b717d5982a14a09b423b6de 842 Pfam PF00593 TonB dependent receptor 568 840 7.0E-23 T 22-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 SRM_RS10795 817306800b717d5982a14a09b423b6de 842 ProSitePatterns PS01156 TonB-dependent receptor proteins signature 2. 825 842 - T 22-04-2016 IPR010917 TonB-dependent receptor, conserved site SRM_RS10795 817306800b717d5982a14a09b423b6de 842 Pfam PF07715 TonB-dependent Receptor Plug Domain 167 270 7.5E-18 T 22-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 SRM_RS10795 817306800b717d5982a14a09b423b6de 842 Gene3D G3DSA:2.170.130.10 146 271 1.3E-27 T 22-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 SRM_RS10795 817306800b717d5982a14a09b423b6de 842 PANTHER PTHR30069 30 274 2.1E-37 T 22-04-2016 SRM_RS10795 817306800b717d5982a14a09b423b6de 842 SUPERFAMILY SSF49452 63 145 1.96E-20 T 22-04-2016 IPR013784 Carbohydrate-binding-like fold GO:0030246 SRM_RS10795 817306800b717d5982a14a09b423b6de 842 SUPERFAMILY SSF56935 154 842 4.03E-83 T 22-04-2016 SRM_RS10795 817306800b717d5982a14a09b423b6de 842 Gene3D G3DSA:2.40.170.20 272 842 8.4E-58 T 22-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 SRM_RS10795 817306800b717d5982a14a09b423b6de 842 PANTHER PTHR30069:SF2 30 274 2.1E-37 T 22-04-2016 SRM_RS03790 7362f26e4fecfe96b199fb18be09211b 283 SUPERFAMILY SSF53448 1 234 5.49E-24 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases SRM_RS03790 7362f26e4fecfe96b199fb18be09211b 283 Gene3D G3DSA:3.90.550.10 1 231 1.5E-18 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases SRM_RS03790 7362f26e4fecfe96b199fb18be09211b 283 Pfam PF00535 Glycosyl transferase family 2 2 105 2.4E-5 T 22-04-2016 IPR001173 Glycosyltransferase 2-like SRM_RS01480 425094d0686c3463711b6b34f0bf5f5b 387 Gene3D G3DSA:1.20.1250.20 199 369 6.1E-11 T 22-04-2016 SRM_RS01480 425094d0686c3463711b6b34f0bf5f5b 387 Gene3D G3DSA:1.20.1250.20 12 180 3.6E-12 T 22-04-2016 SRM_RS01480 425094d0686c3463711b6b34f0bf5f5b 387 PANTHER PTHR23523 2 384 6.4E-130 T 22-04-2016 SRM_RS01480 425094d0686c3463711b6b34f0bf5f5b 387 Pfam PF07690 Major Facilitator Superfamily 24 343 1.6E-19 T 22-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 SRM_RS01480 425094d0686c3463711b6b34f0bf5f5b 387 SUPERFAMILY SSF103473 5 379 5.23E-41 T 22-04-2016 IPR020846 Major facilitator superfamily domain SRM_RS01480 425094d0686c3463711b6b34f0bf5f5b 387 PANTHER PTHR23523:SF2 2 384 6.4E-130 T 22-04-2016 SRM_RS06195 c015990a63b2d4ccad33268e1fb9afc0 448 PANTHER PTHR34289:SF3 88 446 1.1E-54 T 22-04-2016 SRM_RS06195 c015990a63b2d4ccad33268e1fb9afc0 448 Pfam PF05684 Protein of unknown function (DUF819) 67 441 7.1E-87 T 22-04-2016 IPR008537 Protein of unknown function DUF819 SRM_RS06195 c015990a63b2d4ccad33268e1fb9afc0 448 PANTHER PTHR34289 88 446 1.1E-54 T 22-04-2016 SRM_RS07960 5c2560a83db87e77bae9da65568a6bc2 274 Gene3D G3DSA:3.60.15.10 2 195 1.3E-32 T 22-04-2016 IPR001279 Metallo-beta-lactamase SRM_RS07960 5c2560a83db87e77bae9da65568a6bc2 274 Pfam PF00753 Metallo-beta-lactamase superfamily 2 177 2.5E-18 T 22-04-2016 IPR001279 Metallo-beta-lactamase SRM_RS07960 5c2560a83db87e77bae9da65568a6bc2 274 PANTHER PTHR11935 1 195 4.0E-40 T 22-04-2016 SRM_RS07960 5c2560a83db87e77bae9da65568a6bc2 274 SMART SM00849 1 188 6.0E-20 T 22-04-2016 IPR001279 Metallo-beta-lactamase SRM_RS07960 5c2560a83db87e77bae9da65568a6bc2 274 SUPERFAMILY SSF56281 2 207 1.19E-39 T 22-04-2016 IPR001279 Metallo-beta-lactamase SRM_RS07960 5c2560a83db87e77bae9da65568a6bc2 274 PANTHER PTHR11935:SF28 1 195 4.0E-40 T 22-04-2016 SRM_RS08545 a1970bd38b6c14e02d176cedb6f2b0e8 433 ProSitePatterns PS00099 Thiolases active site. 412 425 - T 22-04-2016 IPR020610 Thiolase, active site GO:0008152|GO:0016747 SRM_RS08545 a1970bd38b6c14e02d176cedb6f2b0e8 433 PANTHER PTHR18919 8 432 2.2E-188 T 22-04-2016 SRM_RS08545 a1970bd38b6c14e02d176cedb6f2b0e8 433 SUPERFAMILY SSF53901 10 289 2.48E-62 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 SRM_RS08545 a1970bd38b6c14e02d176cedb6f2b0e8 433 Gene3D G3DSA:3.40.47.10 171 215 2.2E-49 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 SRM_RS08545 a1970bd38b6c14e02d176cedb6f2b0e8 433 Gene3D G3DSA:3.40.47.10 297 430 2.2E-49 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 SRM_RS08545 a1970bd38b6c14e02d176cedb6f2b0e8 433 SUPERFAMILY SSF53901 292 430 3.02E-34 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 SRM_RS08545 a1970bd38b6c14e02d176cedb6f2b0e8 433 Pfam PF00108 Thiolase, N-terminal domain 11 283 7.4E-71 T 22-04-2016 IPR020616 Thiolase, N-terminal GO:0008152|GO:0016747 SRM_RS08545 a1970bd38b6c14e02d176cedb6f2b0e8 433 ProSitePatterns PS00098 Thiolases acyl-enzyme intermediate signature. 90 108 - T 22-04-2016 IPR020615 Thiolase, acyl-enzyme intermediate active site GO:0008152|GO:0016747 Reactome: REACT_22258 SRM_RS08545 a1970bd38b6c14e02d176cedb6f2b0e8 433 PIRSF PIRSF000429 5 431 1.2E-118 T 22-04-2016 IPR002155 Thiolase GO:0008152|GO:0016747 SRM_RS08545 a1970bd38b6c14e02d176cedb6f2b0e8 433 TIGRFAM TIGR01930 AcCoA-C-Actrans: acetyl-CoA C-acyltransferase 13 429 7.7E-124 T 22-04-2016 IPR002155 Thiolase GO:0008152|GO:0016747 SRM_RS08545 a1970bd38b6c14e02d176cedb6f2b0e8 433 Gene3D G3DSA:3.40.47.10 216 294 6.0E-53 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 SRM_RS08545 a1970bd38b6c14e02d176cedb6f2b0e8 433 Gene3D G3DSA:3.40.47.10 10 129 6.0E-53 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 SRM_RS08545 a1970bd38b6c14e02d176cedb6f2b0e8 433 Pfam PF02803 Thiolase, C-terminal domain 291 430 2.9E-42 T 22-04-2016 IPR020617 Thiolase, C-terminal GO:0008152|GO:0016747 SRM_RS08545 a1970bd38b6c14e02d176cedb6f2b0e8 433 PANTHER PTHR18919:SF5 8 432 2.2E-188 T 22-04-2016 SRM_RS08545 a1970bd38b6c14e02d176cedb6f2b0e8 433 ProSitePatterns PS00737 Thiolases signature 2. 377 393 - T 22-04-2016 IPR020613 Thiolase, conserved site GO:0008152|GO:0016747 SRM_RS08520 7577f927e8f63a09b6e56a17c80f2c40 650 Gene3D G3DSA:1.10.510.10 109 271 3.9E-48 T 22-04-2016 SRM_RS08520 7577f927e8f63a09b6e56a17c80f2c40 650 Gene3D G3DSA:1.10.510.10 361 418 3.9E-48 T 22-04-2016 SRM_RS08520 7577f927e8f63a09b6e56a17c80f2c40 650 Gene3D G3DSA:2.60.40.1120 584 647 2.9E-6 T 22-04-2016 IPR014766 Carboxypeptidase, regulatory domain SRM_RS08520 7577f927e8f63a09b6e56a17c80f2c40 650 ProSitePatterns PS00107 Protein kinases ATP-binding region signature. 17 40 - T 22-04-2016 IPR017441 Protein kinase, ATP binding site GO:0005524 SRM_RS08520 7577f927e8f63a09b6e56a17c80f2c40 650 PANTHER PTHR24362:SF160 1 437 2.3E-84 T 22-04-2016 SRM_RS08520 7577f927e8f63a09b6e56a17c80f2c40 650 PANTHER PTHR24362 1 437 2.3E-84 T 22-04-2016 SRM_RS08520 7577f927e8f63a09b6e56a17c80f2c40 650 Gene3D G3DSA:3.30.200.20 6 108 1.9E-21 T 22-04-2016 SRM_RS08520 7577f927e8f63a09b6e56a17c80f2c40 650 Pfam PF00069 Protein kinase domain 11 260 4.9E-52 T 22-04-2016 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 SRM_RS08520 7577f927e8f63a09b6e56a17c80f2c40 650 SMART SM00220 11 271 2.9E-60 T 22-04-2016 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 SRM_RS08520 7577f927e8f63a09b6e56a17c80f2c40 650 Pfam PF08308 PEGA domain 590 646 1.6E-9 T 22-04-2016 IPR013229 PEGA SRM_RS08520 7577f927e8f63a09b6e56a17c80f2c40 650 Pfam PF08308 PEGA domain 436 501 3.2E-12 T 22-04-2016 IPR013229 PEGA SRM_RS08520 7577f927e8f63a09b6e56a17c80f2c40 650 ProSitePatterns PS00108 Serine/Threonine protein kinases active-site signature. 130 142 - T 22-04-2016 IPR008271 Serine/threonine-protein kinase, active site GO:0004672|GO:0006468 SRM_RS08520 7577f927e8f63a09b6e56a17c80f2c40 650 SUPERFAMILY SSF56112 7 270 3.64E-73 T 22-04-2016 IPR011009 Protein kinase-like domain SRM_RS04455 3d4fd5cc9614e51165daad4e2e0ce700 337 SUPERFAMILY SSF53448 1 292 2.16E-47 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases SRM_RS04455 3d4fd5cc9614e51165daad4e2e0ce700 337 Pfam PF00483 Nucleotidyl transferase 7 236 2.5E-19 T 22-04-2016 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 Reactome: REACT_17015 SRM_RS04455 3d4fd5cc9614e51165daad4e2e0ce700 337 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 252 285 3.4E-6 T 22-04-2016 IPR001451 Hexapeptide repeat SRM_RS04455 3d4fd5cc9614e51165daad4e2e0ce700 337 PANTHER PTHR22572 2 316 1.6E-44 T 22-04-2016 SRM_RS04455 3d4fd5cc9614e51165daad4e2e0ce700 337 Gene3D G3DSA:3.90.550.10 1 291 2.4E-52 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases SRM_RS14515 05fb3fbd2d88f51638329a0da39d8239 442 PANTHER PTHR15184:SF9 1 421 6.9E-211 T 22-04-2016 IPR032463 ATPase, type III secretion system, FliI GO:0016887|GO:0030257|GO:0044780 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 SRM_RS14515 05fb3fbd2d88f51638329a0da39d8239 442 TIGRFAM TIGR01026 fliI_yscN: ATPase, FliI/YscN family 15 422 1.4E-178 T 22-04-2016 IPR005714 ATPase, type III secretion system, FliI/YscN GO:0005737|GO:0009058|GO:0016887|GO:0030254|GO:0030257 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 SRM_RS14515 05fb3fbd2d88f51638329a0da39d8239 442 Pfam PF02874 ATP synthase alpha/beta family, beta-barrel domain 24 88 1.1E-7 T 22-04-2016 IPR004100 ATPase, F1 complex alpha/beta subunit, N-terminal domain GO:0015992|GO:0046034 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 SRM_RS14515 05fb3fbd2d88f51638329a0da39d8239 442 Gene3D G3DSA:3.40.50.300 94 359 1.6E-97 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SRM_RS14515 05fb3fbd2d88f51638329a0da39d8239 442 SUPERFAMILY SSF52540 94 362 1.04E-98 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SRM_RS14515 05fb3fbd2d88f51638329a0da39d8239 442 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 148 357 2.4E-73 T 22-04-2016 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 SRM_RS14515 05fb3fbd2d88f51638329a0da39d8239 442 PANTHER PTHR15184 1 421 6.9E-211 T 22-04-2016 SRM_RS14515 05fb3fbd2d88f51638329a0da39d8239 442 ProSitePatterns PS00152 ATP synthase alpha and beta subunits signature. 348 357 - T 22-04-2016 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 SRM_RS14515 05fb3fbd2d88f51638329a0da39d8239 442 SMART SM00382 160 341 1.3E-11 T 22-04-2016 IPR003593 AAA+ ATPase domain SRM_RS07395 6dab86bc7f63c48c02f9753ea804d40f 196 Pfam PF05036 Sporulation related domain 105 188 2.9E-8 T 22-04-2016 IPR007730 Sporulation-related domain GO:0042834 SRM_RS07395 6dab86bc7f63c48c02f9753ea804d40f 196 SUPERFAMILY SSF110997 106 186 2.22E-5 T 22-04-2016 IPR007730 Sporulation-related domain GO:0042834 SRM_RS07395 6dab86bc7f63c48c02f9753ea804d40f 196 Gene3D G3DSA:3.30.70.1070 105 187 7.7E-5 T 22-04-2016 IPR007730 Sporulation-related domain GO:0042834 SRM_RS11865 678f8f612276cf06dde7c0e801eedc96 248 SUPERFAMILY SSF52833 99 241 1.11E-10 T 22-04-2016 IPR012336 Thioredoxin-like fold SRM_RS11865 678f8f612276cf06dde7c0e801eedc96 248 Gene3D G3DSA:3.40.30.10 110 242 2.5E-11 T 22-04-2016 IPR012336 Thioredoxin-like fold SRM_RS02670 c2502db2e2031e566bb808294c429e3a 228 PANTHER PTHR30128 32 214 6.0E-48 T 22-04-2016 SRM_RS02670 c2502db2e2031e566bb808294c429e3a 228 Pfam PF00691 OmpA family 107 202 9.9E-27 T 22-04-2016 IPR006665 OmpA-like domain SRM_RS02670 c2502db2e2031e566bb808294c429e3a 228 Pfam PF13488 Glycine zipper 34 78 7.9E-9 T 22-04-2016 SRM_RS02670 c2502db2e2031e566bb808294c429e3a 228 Gene3D G3DSA:3.30.1330.60 94 208 1.3E-42 T 22-04-2016 IPR006665 OmpA-like domain SRM_RS02670 c2502db2e2031e566bb808294c429e3a 228 SUPERFAMILY SSF103088 91 208 1.31E-39 T 22-04-2016 IPR006665 OmpA-like domain SRM_RS02670 c2502db2e2031e566bb808294c429e3a 228 PRINTS PR01021 OMPA domain signature 153 169 3.3E-17 T 22-04-2016 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 SRM_RS02670 c2502db2e2031e566bb808294c429e3a 228 PRINTS PR01021 OMPA domain signature 138 153 3.3E-17 T 22-04-2016 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 SRM_RS02670 c2502db2e2031e566bb808294c429e3a 228 PRINTS PR01021 OMPA domain signature 108 130 3.3E-17 T 22-04-2016 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 SRM_RS12765 3b9368a2863131596bcc393b77b012d1 226 PANTHER PTHR16254 3 158 8.4E-37 T 22-04-2016 SRM_RS12765 3b9368a2863131596bcc393b77b012d1 226 SUPERFAMILY SSF51735 3 132 2.44E-31 T 22-04-2016 IPR016040 NAD(P)-binding domain SRM_RS12765 3b9368a2863131596bcc393b77b012d1 226 SUPERFAMILY SSF116726 131 217 3.53E-16 T 22-04-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 SRM_RS12765 3b9368a2863131596bcc393b77b012d1 226 Pfam PF02254 TrkA-N domain 4 119 2.3E-23 T 22-04-2016 IPR003148 Regulator of K+ conductance, N-terminal GO:0006813 SRM_RS12765 3b9368a2863131596bcc393b77b012d1 226 Gene3D G3DSA:3.40.50.720 2 138 2.3E-31 T 22-04-2016 IPR016040 NAD(P)-binding domain SRM_RS12765 3b9368a2863131596bcc393b77b012d1 226 Pfam PF02080 TrkA-C domain 149 217 6.4E-12 T 22-04-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 SRM_RS12765 3b9368a2863131596bcc393b77b012d1 226 Gene3D G3DSA:3.30.70.1450 144 218 2.1E-17 T 22-04-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 SRM_RS01025 3b986c82ed79541e853789cdfc02ff30 248 Gene3D G3DSA:3.10.129.10 152 247 2.5E-20 T 22-04-2016 IPR029069 HotDog domain SRM_RS01025 3b986c82ed79541e853789cdfc02ff30 248 Gene3D G3DSA:3.10.129.10 5 131 1.3E-30 T 22-04-2016 IPR029069 HotDog domain SRM_RS01025 3b986c82ed79541e853789cdfc02ff30 248 SUPERFAMILY SSF54637 5 137 1.23E-33 T 22-04-2016 IPR029069 HotDog domain SRM_RS01025 3b986c82ed79541e853789cdfc02ff30 248 PANTHER PTHR31727:SF6 5 221 9.8E-39 T 22-04-2016 SRM_RS01025 3b986c82ed79541e853789cdfc02ff30 248 SUPERFAMILY SSF54637 156 247 2.83E-19 T 22-04-2016 IPR029069 HotDog domain SRM_RS01025 3b986c82ed79541e853789cdfc02ff30 248 Pfam PF01643 Acyl-ACP thioesterase 8 247 1.7E-44 T 22-04-2016 IPR002864 Acyl-ACP thioesterase GO:0006633|GO:0016790 SRM_RS01025 3b986c82ed79541e853789cdfc02ff30 248 PANTHER PTHR31727 5 221 9.8E-39 T 22-04-2016 SRM_RS04670 1c3bc12e823efc91ae32474715882950 319 SUPERFAMILY SSF54211 5 167 5.39E-29 T 22-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold SRM_RS04670 1c3bc12e823efc91ae32474715882950 319 Gene3D G3DSA:3.30.70.890 167 296 2.6E-35 T 22-04-2016 IPR013750 GHMP kinase, C-terminal domain SRM_RS04670 1c3bc12e823efc91ae32474715882950 319 Pfam PF00288 GHMP kinases N terminal domain 84 150 6.8E-11 T 22-04-2016 IPR006204 GHMP kinase N-terminal domain GO:0005524 SRM_RS04670 1c3bc12e823efc91ae32474715882950 319 PRINTS PR00958 Homoserine kinase signature 137 150 1.1E-25 T 22-04-2016 SRM_RS04670 1c3bc12e823efc91ae32474715882950 319 PRINTS PR00958 Homoserine kinase signature 254 269 1.1E-25 T 22-04-2016 SRM_RS04670 1c3bc12e823efc91ae32474715882950 319 PRINTS PR00958 Homoserine kinase signature 97 112 1.1E-25 T 22-04-2016 SRM_RS04670 1c3bc12e823efc91ae32474715882950 319 PRINTS PR00958 Homoserine kinase signature 175 192 1.1E-25 T 22-04-2016 SRM_RS04670 1c3bc12e823efc91ae32474715882950 319 PRINTS PR00958 Homoserine kinase signature 12 27 1.1E-25 T 22-04-2016 SRM_RS04670 1c3bc12e823efc91ae32474715882950 319 Pfam PF08544 GHMP kinases C terminal 215 288 3.9E-12 T 22-04-2016 IPR013750 GHMP kinase, C-terminal domain SRM_RS04670 1c3bc12e823efc91ae32474715882950 319 SUPERFAMILY SSF55060 170 289 2.4E-29 T 22-04-2016 IPR013750 GHMP kinase, C-terminal domain SRM_RS04670 1c3bc12e823efc91ae32474715882950 319 Gene3D G3DSA:3.30.230.10 4 161 2.1E-40 T 22-04-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup SRM_RS04670 1c3bc12e823efc91ae32474715882950 319 PANTHER PTHR20861:SF1 4 316 2.8E-92 T 22-04-2016 SRM_RS04670 1c3bc12e823efc91ae32474715882950 319 PIRSF PIRSF000676 1 311 5.3E-80 T 22-04-2016 IPR000870 Homoserine kinase GO:0004413|GO:0005524|GO:0006566 KEGG: 00260+2.7.1.39|MetaCyc: PWY-702|UniPathway: UPA00050 SRM_RS04670 1c3bc12e823efc91ae32474715882950 319 PANTHER PTHR20861 4 316 2.8E-92 T 22-04-2016 SRM_RS04670 1c3bc12e823efc91ae32474715882950 319 Hamap MF_00384 Homoserine kinase [thrB]. 5 308 31.0 T 22-04-2016 IPR000870 Homoserine kinase GO:0004413|GO:0005524|GO:0006566 KEGG: 00260+2.7.1.39|MetaCyc: PWY-702|UniPathway: UPA00050 SRM_RS04670 1c3bc12e823efc91ae32474715882950 319 TIGRFAM TIGR00191 thrB: homoserine kinase 8 308 2.8E-64 T 22-04-2016 IPR000870 Homoserine kinase GO:0004413|GO:0005524|GO:0006566 KEGG: 00260+2.7.1.39|MetaCyc: PWY-702|UniPathway: UPA00050 SRM_RS07585 be0e95969b791cac0adb17d5a4a68f2a 391 PANTHER PTHR11601 1 389 3.6E-117 T 22-04-2016 SRM_RS07585 be0e95969b791cac0adb17d5a4a68f2a 391 Gene3D G3DSA:3.90.1150.10 271 387 3.6E-29 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 SRM_RS07585 be0e95969b791cac0adb17d5a4a68f2a 391 Gene3D G3DSA:3.40.640.10 29 270 5.9E-61 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 SRM_RS07585 be0e95969b791cac0adb17d5a4a68f2a 391 PANTHER PTHR11601:SF42 1 389 3.6E-117 T 22-04-2016 SRM_RS07585 be0e95969b791cac0adb17d5a4a68f2a 391 Pfam PF00266 Aminotransferase class-V 19 381 1.7E-61 T 22-04-2016 IPR000192 Aminotransferase class V domain SRM_RS07585 be0e95969b791cac0adb17d5a4a68f2a 391 SUPERFAMILY SSF53383 1 389 1.6E-87 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase SRM_RS04015 f7c0bc5e4f0c46abaa0983b8ffc8dd76 283 SUPERFAMILY SSF52540 13 280 2.04E-44 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SRM_RS04015 f7c0bc5e4f0c46abaa0983b8ffc8dd76 283 Pfam PF00685 Sulfotransferase domain 37 275 2.4E-25 T 22-04-2016 IPR000863 Sulfotransferase domain GO:0008146 SRM_RS04015 f7c0bc5e4f0c46abaa0983b8ffc8dd76 283 Gene3D G3DSA:3.40.50.300 29 281 8.5E-46 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SRM_RS04015 f7c0bc5e4f0c46abaa0983b8ffc8dd76 283 PANTHER PTHR11783:SF15 38 280 3.9E-19 T 22-04-2016 SRM_RS04015 f7c0bc5e4f0c46abaa0983b8ffc8dd76 283 PANTHER PTHR11783 38 280 3.9E-19 T 22-04-2016 SRM_RS01160 bbcb28b06aed2d9c2247ef946de95904 303 PANTHER PTHR11811:SF28 1 299 4.4E-159 T 22-04-2016 SRM_RS01160 bbcb28b06aed2d9c2247ef946de95904 303 SUPERFAMILY SSF51735 1 155 1.2E-47 T 22-04-2016 IPR016040 NAD(P)-binding domain SRM_RS01160 bbcb28b06aed2d9c2247ef946de95904 303 PANTHER PTHR11811 1 299 4.4E-159 T 22-04-2016 SRM_RS01160 bbcb28b06aed2d9c2247ef946de95904 303 PRINTS PR00076 6-phosphogluconate dehydrogenase signature 59 88 4.9E-37 T 22-04-2016 IPR006183 6-phosphogluconate dehydrogenase GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|UniPathway: UPA00115 SRM_RS01160 bbcb28b06aed2d9c2247ef946de95904 303 PRINTS PR00076 6-phosphogluconate dehydrogenase signature 112 137 4.9E-37 T 22-04-2016 IPR006183 6-phosphogluconate dehydrogenase GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|UniPathway: UPA00115 SRM_RS01160 bbcb28b06aed2d9c2247ef946de95904 303 PRINTS PR00076 6-phosphogluconate dehydrogenase signature 234 261 4.9E-37 T 22-04-2016 IPR006183 6-phosphogluconate dehydrogenase GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|UniPathway: UPA00115 SRM_RS01160 bbcb28b06aed2d9c2247ef946de95904 303 PRINTS PR00076 6-phosphogluconate dehydrogenase signature 158 186 4.9E-37 T 22-04-2016 IPR006183 6-phosphogluconate dehydrogenase GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|UniPathway: UPA00115 SRM_RS01160 bbcb28b06aed2d9c2247ef946de95904 303 PRINTS PR00076 6-phosphogluconate dehydrogenase signature 1 24 4.9E-37 T 22-04-2016 IPR006183 6-phosphogluconate dehydrogenase GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|UniPathway: UPA00115 SRM_RS01160 bbcb28b06aed2d9c2247ef946de95904 303 SUPERFAMILY SSF48179 167 302 7.48E-42 T 22-04-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 SRM_RS01160 bbcb28b06aed2d9c2247ef946de95904 303 Gene3D G3DSA:1.10.1040.10 171 291 2.8E-35 T 22-04-2016 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 SRM_RS01160 bbcb28b06aed2d9c2247ef946de95904 303 SMART SM01350 169 299 5.2E-6 T 22-04-2016 IPR006114 6-phosphogluconate dehydrogenase, C-terminal GO:0004616|GO:0006098|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|UniPathway: UPA00115 SRM_RS01160 bbcb28b06aed2d9c2247ef946de95904 303 TIGRFAM TIGR00872 gnd_rel: 6-phosphogluconate dehydrogenase (decarboxylating) 1 301 8.1E-116 T 22-04-2016 IPR004849 6-phosphogluconate dehydrogenase, YqeC-type GO:0055114 SRM_RS01160 bbcb28b06aed2d9c2247ef946de95904 303 Pfam PF00393 6-phosphogluconate dehydrogenase, C-terminal domain 169 279 1.4E-23 T 22-04-2016 IPR006114 6-phosphogluconate dehydrogenase, C-terminal GO:0004616|GO:0006098|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|UniPathway: UPA00115 SRM_RS01160 bbcb28b06aed2d9c2247ef946de95904 303 Pfam PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase 2 153 3.2E-43 T 22-04-2016 IPR006115 6-phosphogluconate dehydrogenase, NADP-binding GO:0004616|GO:0055114 SRM_RS01160 bbcb28b06aed2d9c2247ef946de95904 303 Gene3D G3DSA:3.40.50.720 1 170 2.5E-50 T 22-04-2016 IPR016040 NAD(P)-binding domain SRM_RS09925 f50043a3867a3a1e4f4ee96a728871e0 432 PANTHER PTHR30469:SF15 15 128 8.8E-57 T 22-04-2016 SRM_RS09925 f50043a3867a3a1e4f4ee96a728871e0 432 PANTHER PTHR30469:SF15 154 428 8.8E-57 T 22-04-2016 SRM_RS09925 f50043a3867a3a1e4f4ee96a728871e0 432 Gene3D G3DSA:2.40.50.100 246 276 2.1E-9 T 22-04-2016 SRM_RS09925 f50043a3867a3a1e4f4ee96a728871e0 432 Gene3D G3DSA:2.40.50.100 94 121 2.1E-9 T 22-04-2016 SRM_RS09925 f50043a3867a3a1e4f4ee96a728871e0 432 Pfam PF13437 HlyD family secretion protein 248 346 4.8E-13 T 22-04-2016 SRM_RS09925 f50043a3867a3a1e4f4ee96a728871e0 432 Pfam PF13533 Biotin-lipoyl like 97 136 2.5E-6 T 22-04-2016 SRM_RS09925 f50043a3867a3a1e4f4ee96a728871e0 432 PANTHER PTHR30469 15 128 8.8E-57 T 22-04-2016 SRM_RS09925 f50043a3867a3a1e4f4ee96a728871e0 432 PANTHER PTHR30469 154 428 8.8E-57 T 22-04-2016 SRM_RS14425 528758029ca52f95d365a0ce19d9739e 677 SUPERFAMILY SSF58104 334 630 1.05E-73 T 22-04-2016 SRM_RS14425 528758029ca52f95d365a0ce19d9739e 677 SMART SM00283 368 629 2.0E-79 T 22-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 SRM_RS14425 528758029ca52f95d365a0ce19d9739e 677 PANTHER PTHR32089 284 632 5.6E-109 T 22-04-2016 SRM_RS14425 528758029ca52f95d365a0ce19d9739e 677 Gene3D G3DSA:1.10.287.950 383 599 3.0E-59 T 22-04-2016 SRM_RS14425 528758029ca52f95d365a0ce19d9739e 677 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 426 628 4.8E-55 T 22-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 SRM_RS14425 528758029ca52f95d365a0ce19d9739e 677 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 495 524 4.4E-21 T 22-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 SRM_RS14425 528758029ca52f95d365a0ce19d9739e 677 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 466 493 4.4E-21 T 22-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 SRM_RS14425 528758029ca52f95d365a0ce19d9739e 677 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 389 418 4.4E-21 T 22-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 SRM_RS10145 356e637408171c23b57fda0b45cf41ab 127 Pfam PF00542 Ribosomal protein L7/L12 C-terminal domain 61 127 1.8E-29 T 22-04-2016 IPR013823 Ribosomal protein L7/L12, C-terminal GO:0003735|GO:0006412 SRM_RS10145 356e637408171c23b57fda0b45cf41ab 127 TIGRFAM TIGR00855 L12: ribosomal protein bL12 1 126 9.3E-38 T 22-04-2016 IPR000206 Ribosomal protein L7/L12 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SRM_RS10145 356e637408171c23b57fda0b45cf41ab 127 SUPERFAMILY SSF48300 3 63 7.72E-11 T 22-04-2016 IPR008932 Ribosomal protein L7/L12, oligomerisation GO:0003735|GO:0005622|GO:0005840|GO:0006412 SRM_RS10145 356e637408171c23b57fda0b45cf41ab 127 Gene3D G3DSA:3.30.1390.10 55 127 4.1E-32 T 22-04-2016 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like SRM_RS10145 356e637408171c23b57fda0b45cf41ab 127 Gene3D G3DSA:1.20.5.710 4 50 1.6E-7 T 22-04-2016 SRM_RS10145 356e637408171c23b57fda0b45cf41ab 127 SUPERFAMILY SSF54736 56 126 7.15E-24 T 22-04-2016 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like SRM_RS10145 356e637408171c23b57fda0b45cf41ab 127 Hamap MF_00368 50S ribosomal protein L7/L12 [rplL]. 1 127 21.562 T 22-04-2016 IPR000206 Ribosomal protein L7/L12 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SRM_RS10145 356e637408171c23b57fda0b45cf41ab 127 ProDom PD001326 RIBOSOMAL L7/L12 50S RIBONUCLEOPROTEIN CHLOROPLAST L12 PLASTID DIRECT SEQUENCING PEPTIDE 62 127 2.0E-18 T 22-04-2016 IPR013823 Ribosomal protein L7/L12, C-terminal GO:0003735|GO:0006412 SRM_RS10145 356e637408171c23b57fda0b45cf41ab 127 Pfam PF16320 Ribosomal protein L7/L12 dimerisation domain 4 50 6.7E-12 T 22-04-2016 IPR008932 Ribosomal protein L7/L12, oligomerisation GO:0003735|GO:0005622|GO:0005840|GO:0006412 SRM_RS05990 9fb5bae1dd562b1cb1df9d38e06820dc 372 SUPERFAMILY SSF56935 61 356 1.83E-11 T 22-04-2016 SRM_RS05990 9fb5bae1dd562b1cb1df9d38e06820dc 372 Gene3D G3DSA:2.40.170.20 195 320 7.3E-4 T 22-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 SRM_RS05990 9fb5bae1dd562b1cb1df9d38e06820dc 372 Gene3D G3DSA:2.40.160.60 65 187 7.1E-8 T 22-04-2016 SRM_RS13370 6ee1cdd0a2915152fa4d378407fec035 655 Pfam PF08309 LVIVD repeat 382 405 0.035 T 22-04-2016 IPR013211 LVIVD SRM_RS13370 6ee1cdd0a2915152fa4d378407fec035 655 Pfam PF08309 LVIVD repeat 458 499 0.045 T 22-04-2016 IPR013211 LVIVD SRM_RS13370 6ee1cdd0a2915152fa4d378407fec035 655 Pfam PF08309 LVIVD repeat 572 595 0.31 T 22-04-2016 IPR013211 LVIVD SRM_RS13370 6ee1cdd0a2915152fa4d378407fec035 655 SUPERFAMILY SSF75011 551 642 3.53E-10 T 22-04-2016 SRM_RS13370 6ee1cdd0a2915152fa4d378407fec035 655 SUPERFAMILY SSF75011 319 495 3.53E-10 T 22-04-2016 SRM_RS13370 6ee1cdd0a2915152fa4d378407fec035 655 SMART SM00635 115 195 0.053 T 22-04-2016 IPR003343 Bacterial Ig-like, group 2 SRM_RS13370 6ee1cdd0a2915152fa4d378407fec035 655 SMART SM00635 25 104 3.2 T 22-04-2016 IPR003343 Bacterial Ig-like, group 2 SRM_RS13370 6ee1cdd0a2915152fa4d378407fec035 655 Gene3D G3DSA:2.130.10.10 324 380 2.2E-4 T 22-04-2016 IPR015943 WD40/YVTN repeat-like-containing domain GO:0005515 SRM_RS13370 6ee1cdd0a2915152fa4d378407fec035 655 Gene3D G3DSA:2.130.10.10 568 630 2.2E-4 T 22-04-2016 IPR015943 WD40/YVTN repeat-like-containing domain GO:0005515 SRM_RS13370 6ee1cdd0a2915152fa4d378407fec035 655 Pfam PF02368 Bacterial Ig-like domain (group 2) 26 96 2.0E-5 T 22-04-2016 IPR003343 Bacterial Ig-like, group 2 SRM_RS13370 6ee1cdd0a2915152fa4d378407fec035 655 Gene3D G3DSA:2.60.40.1080 115 196 7.6E-8 T 22-04-2016 SRM_RS15075 20e2a1854c071f54e79b95e0b41c340c 385 PANTHER PTHR30472 24 381 1.7E-152 T 22-04-2016 IPR000522 ABC transporter, permease protein GO:0005215|GO:0016020 SRM_RS15075 20e2a1854c071f54e79b95e0b41c340c 385 SUPERFAMILY SSF81345 33 375 5.1E-87 T 22-04-2016 IPR029022 ABC transporter, BtuC-like SRM_RS15075 20e2a1854c071f54e79b95e0b41c340c 385 Gene3D G3DSA:1.10.3470.10 35 379 1.6E-113 T 22-04-2016 IPR029022 ABC transporter, BtuC-like SRM_RS15075 20e2a1854c071f54e79b95e0b41c340c 385 PANTHER PTHR30472:SF3 24 381 1.7E-152 T 22-04-2016 SRM_RS15075 20e2a1854c071f54e79b95e0b41c340c 385 Pfam PF01032 FecCD transport family 49 375 4.2E-95 T 22-04-2016 IPR000522 ABC transporter, permease protein GO:0005215|GO:0016020 SRM_RS12070 4e65963713e5f63286c08c3e57ff9038 488 Gene3D G3DSA:3.40.50.1980 78 273 6.8E-77 T 22-04-2016 SRM_RS12070 4e65963713e5f63286c08c3e57ff9038 488 TIGRFAM TIGR00069 hisD: histidinol dehydrogenase 84 476 1.6E-162 T 22-04-2016 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23|UniPathway: UPA00031 SRM_RS12070 4e65963713e5f63286c08c3e57ff9038 488 Gene3D G3DSA:3.40.50.1980 274 423 9.3E-65 T 22-04-2016 SRM_RS12070 4e65963713e5f63286c08c3e57ff9038 488 SUPERFAMILY SSF53720 55 478 3.14E-84 T 22-04-2016 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 SRM_RS12070 4e65963713e5f63286c08c3e57ff9038 488 ProSitePatterns PS00611 Histidinol dehydrogenase signature. 279 311 - T 22-04-2016 IPR001692 Histidinol dehydrogenase, conserved site GO:0000105|GO:0004399|GO:0055114 KEGG: 00340+1.1.1.23|UniPathway: UPA00031 SRM_RS12070 4e65963713e5f63286c08c3e57ff9038 488 PANTHER PTHR21256 64 483 4.0E-192 T 22-04-2016 SRM_RS12070 4e65963713e5f63286c08c3e57ff9038 488 Hamap MF_01024 Histidinol dehydrogenase [hisD]. 56 477 40.896 T 22-04-2016 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23|UniPathway: UPA00031 SRM_RS12070 4e65963713e5f63286c08c3e57ff9038 488 Pfam PF00815 Histidinol dehydrogenase 74 477 7.2E-166 T 22-04-2016 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23|UniPathway: UPA00031 SRM_RS12070 4e65963713e5f63286c08c3e57ff9038 488 PRINTS PR00083 Histidinol dehydrogenase signature 411 429 3.4E-82 T 22-04-2016 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23|UniPathway: UPA00031 SRM_RS12070 4e65963713e5f63286c08c3e57ff9038 488 PRINTS PR00083 Histidinol dehydrogenase signature 279 300 3.4E-82 T 22-04-2016 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23|UniPathway: UPA00031 SRM_RS12070 4e65963713e5f63286c08c3e57ff9038 488 PRINTS PR00083 Histidinol dehydrogenase signature 185 211 3.4E-82 T 22-04-2016 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23|UniPathway: UPA00031 SRM_RS12070 4e65963713e5f63286c08c3e57ff9038 488 PRINTS PR00083 Histidinol dehydrogenase signature 301 320 3.4E-82 T 22-04-2016 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23|UniPathway: UPA00031 SRM_RS12070 4e65963713e5f63286c08c3e57ff9038 488 PRINTS PR00083 Histidinol dehydrogenase signature 220 246 3.4E-82 T 22-04-2016 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23|UniPathway: UPA00031 SRM_RS12070 4e65963713e5f63286c08c3e57ff9038 488 PRINTS PR00083 Histidinol dehydrogenase signature 250 275 3.4E-82 T 22-04-2016 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23|UniPathway: UPA00031 SRM_RS12070 4e65963713e5f63286c08c3e57ff9038 488 PRINTS PR00083 Histidinol dehydrogenase signature 370 395 3.4E-82 T 22-04-2016 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23|UniPathway: UPA00031 SRM_RS12070 4e65963713e5f63286c08c3e57ff9038 488 PRINTS PR00083 Histidinol dehydrogenase signature 84 108 3.4E-82 T 22-04-2016 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23|UniPathway: UPA00031 SRM_RS14735 ce6cd2ebd8947c7084d54986c5d5812f 198 Pfam PF04972 BON domain 74 140 2.0E-10 T 22-04-2016 IPR007055 BON domain SRM_RS14735 ce6cd2ebd8947c7084d54986c5d5812f 198 Gene3D G3DSA:3.10.350.10 155 197 1.1E-16 T 22-04-2016 IPR018392 LysM domain SRM_RS14735 ce6cd2ebd8947c7084d54986c5d5812f 198 SUPERFAMILY SSF54106 155 197 2.62E-11 T 22-04-2016 IPR018392 LysM domain SRM_RS14735 ce6cd2ebd8947c7084d54986c5d5812f 198 Pfam PF01476 LysM domain 157 197 1.1E-11 T 22-04-2016 IPR018392 LysM domain SRM_RS14735 ce6cd2ebd8947c7084d54986c5d5812f 198 SMART SM00257 156 198 4.5E-12 T 22-04-2016 IPR018392 LysM domain SRM_RS10045 cb128ad95dfcad34750e52a01451e617 438 PANTHER PTHR11986:SF5 2 436 7.4E-210 T 22-04-2016 SRM_RS10045 cb128ad95dfcad34750e52a01451e617 438 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 243 279 - T 22-04-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 SRM_RS10045 cb128ad95dfcad34750e52a01451e617 438 Hamap MF_00375 Glutamate-1-semialdehyde 2,1-aminomutase [hemL]. 12 436 102.631 T 22-04-2016 IPR004639 Tetrapyrrole biosynthesis, glutamate-1-semialdehyde aminotransferase GO:0033014|GO:0042286 KEGG: 00860+5.4.3.8|MetaCyc: PWY-5188|UniPathway: UPA00251 SRM_RS10045 cb128ad95dfcad34750e52a01451e617 438 SUPERFAMILY SSF53383 10 435 1.08E-129 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase SRM_RS10045 cb128ad95dfcad34750e52a01451e617 438 PANTHER PTHR11986 2 436 7.4E-210 T 22-04-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 SRM_RS10045 cb128ad95dfcad34750e52a01451e617 438 TIGRFAM TIGR00713 hemL: glutamate-1-semialdehyde-2,1-aminomutase 13 435 1.4E-180 T 22-04-2016 IPR004639 Tetrapyrrole biosynthesis, glutamate-1-semialdehyde aminotransferase GO:0033014|GO:0042286 KEGG: 00860+5.4.3.8|MetaCyc: PWY-5188|UniPathway: UPA00251 SRM_RS10045 cb128ad95dfcad34750e52a01451e617 438 Pfam PF00202 Aminotransferase class-III 41 406 2.8E-78 T 22-04-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 SRM_RS10045 cb128ad95dfcad34750e52a01451e617 438 Gene3D G3DSA:3.40.640.10 79 324 4.2E-85 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 SRM_RS10045 cb128ad95dfcad34750e52a01451e617 438 Gene3D G3DSA:3.90.1150.10 12 78 3.3E-37 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 SRM_RS10045 cb128ad95dfcad34750e52a01451e617 438 Gene3D G3DSA:3.90.1150.10 330 435 3.3E-37 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 SRM_RS03530 e512e846fd5d0ab17c2ade7193112605 168 PIRSF PIRSF002070 1 164 1.4E-39 T 22-04-2016 IPR011344 Single-stranded DNA-binding protein GO:0003697|GO:0006260 SRM_RS03530 e512e846fd5d0ab17c2ade7193112605 168 Gene3D G3DSA:2.40.50.140 1 168 3.0E-52 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold SRM_RS03530 e512e846fd5d0ab17c2ade7193112605 168 SUPERFAMILY SSF50249 3 168 3.77E-55 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold SRM_RS03530 e512e846fd5d0ab17c2ade7193112605 168 Hamap MF_00984 Single-stranded DNA-binding protein. 5 112 34.378 T 22-04-2016 IPR011344 Single-stranded DNA-binding protein GO:0003697|GO:0006260 SRM_RS03530 e512e846fd5d0ab17c2ade7193112605 168 Pfam PF00436 Single-strand binding protein family 5 108 1.6E-40 T 22-04-2016 IPR000424 Primosome PriB/single-strand DNA-binding GO:0003697 SRM_RS03530 e512e846fd5d0ab17c2ade7193112605 168 TIGRFAM TIGR00621 ssb: single-stranded DNA-binding protein 2 168 5.2E-53 T 22-04-2016 IPR011344 Single-stranded DNA-binding protein GO:0003697|GO:0006260 SRM_RS08820 2ed5325dc9e8d72cc327191dff21213e 324 Pfam PF01259 SAICAR synthetase 25 262 3.6E-85 T 22-04-2016 IPR028923 SAICAR synthetase/ADE2, N-terminal KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|UniPathway: UPA00074 SRM_RS08820 2ed5325dc9e8d72cc327191dff21213e 324 Gene3D G3DSA:3.30.470.20 113 239 4.5E-48 T 22-04-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 SRM_RS08820 2ed5325dc9e8d72cc327191dff21213e 324 Hamap MF_00137 Phosphoribosylaminoimidazole-succinocarboxamide synthase [purC]. 22 296 23.873 T 22-04-2016 IPR028923 SAICAR synthetase/ADE2, N-terminal KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|UniPathway: UPA00074 SRM_RS08820 2ed5325dc9e8d72cc327191dff21213e 324 ProSitePatterns PS01058 SAICAR synthetase signature 2. 202 210 - T 22-04-2016 IPR018236 SAICAR synthetase, conserved site GO:0004639|GO:0006164 KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|UniPathway: UPA00074 SRM_RS08820 2ed5325dc9e8d72cc327191dff21213e 324 SUPERFAMILY SSF56104 16 299 2.88E-91 T 22-04-2016 SRM_RS08820 2ed5325dc9e8d72cc327191dff21213e 324 PANTHER PTHR11609:SF9 1 300 1.6E-103 T 22-04-2016 SRM_RS08820 2ed5325dc9e8d72cc327191dff21213e 324 PANTHER PTHR11609 1 300 1.6E-103 T 22-04-2016 SRM_RS08820 2ed5325dc9e8d72cc327191dff21213e 324 Gene3D G3DSA:3.30.200.20 15 112 7.2E-39 T 22-04-2016 SRM_RS02875 a95be096ffa516dc17227b52869fe876 760 SUPERFAMILY SSF56935 125 309 4.03E-65 T 22-04-2016 SRM_RS02875 a95be096ffa516dc17227b52869fe876 760 SUPERFAMILY SSF56935 357 756 4.03E-65 T 22-04-2016 SRM_RS02875 a95be096ffa516dc17227b52869fe876 760 SUPERFAMILY SSF49452 35 122 1.96E-14 T 22-04-2016 IPR013784 Carbohydrate-binding-like fold GO:0030246 SRM_RS02875 a95be096ffa516dc17227b52869fe876 760 Gene3D G3DSA:2.170.130.10 132 255 2.4E-19 T 22-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 SRM_RS02875 a95be096ffa516dc17227b52869fe876 760 PANTHER PTHR30069 1 276 1.3E-21 T 22-04-2016 SRM_RS02875 a95be096ffa516dc17227b52869fe876 760 Pfam PF00593 TonB dependent receptor 526 755 8.3E-9 T 22-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 SRM_RS02875 a95be096ffa516dc17227b52869fe876 760 Gene3D G3DSA:2.40.170.20 256 305 1.9E-39 T 22-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 SRM_RS02875 a95be096ffa516dc17227b52869fe876 760 Gene3D G3DSA:2.40.170.20 353 756 1.9E-39 T 22-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 SRM_RS02875 a95be096ffa516dc17227b52869fe876 760 Pfam PF07715 TonB-dependent Receptor Plug Domain 143 251 2.8E-9 T 22-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 SRM_RS02875 a95be096ffa516dc17227b52869fe876 760 Pfam PF13620 Carboxypeptidase regulatory-like domain 41 121 2.1E-16 T 22-04-2016 SRM_RS02875 a95be096ffa516dc17227b52869fe876 760 Gene3D G3DSA:2.60.40.1120 41 131 2.3E-15 T 22-04-2016 IPR014766 Carboxypeptidase, regulatory domain SRM_RS13475 f1ecb5b78106b6e48267fd38cadfbce9 616 SMART SM00642 130 527 5.6E-63 T 22-04-2016 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 SRM_RS13475 f1ecb5b78106b6e48267fd38cadfbce9 616 PANTHER PTHR10357 512 615 8.8E-80 T 22-04-2016 IPR015902 Glycoside hydrolase, family 13 GO:0003824 SRM_RS13475 f1ecb5b78106b6e48267fd38cadfbce9 616 PANTHER PTHR10357 125 144 8.8E-80 T 22-04-2016 IPR015902 Glycoside hydrolase, family 13 GO:0003824 SRM_RS13475 f1ecb5b78106b6e48267fd38cadfbce9 616 PANTHER PTHR10357 161 494 8.8E-80 T 22-04-2016 IPR015902 Glycoside hydrolase, family 13 GO:0003824 SRM_RS13475 f1ecb5b78106b6e48267fd38cadfbce9 616 Pfam PF10438 Cyclo-malto-dextrinase C-terminal domain 538 613 3.5E-27 T 22-04-2016 IPR019492 Cyclo-malto-dextrinase, C-terminal UniPathway: UPA00153 SRM_RS13475 f1ecb5b78106b6e48267fd38cadfbce9 616 Gene3D G3DSA:2.60.40.10 22 111 1.5E-27 T 22-04-2016 IPR013783 Immunoglobulin-like fold SRM_RS13475 f1ecb5b78106b6e48267fd38cadfbce9 616 Pfam PF00128 Alpha amylase, catalytic domain 164 475 7.3E-55 T 22-04-2016 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 SRM_RS13475 f1ecb5b78106b6e48267fd38cadfbce9 616 Gene3D G3DSA:3.20.20.80 125 534 3.9E-95 T 22-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 SRM_RS13475 f1ecb5b78106b6e48267fd38cadfbce9 616 PANTHER PTHR10357:SF11 512 615 8.8E-80 T 22-04-2016 SRM_RS13475 f1ecb5b78106b6e48267fd38cadfbce9 616 PANTHER PTHR10357:SF11 125 144 8.8E-80 T 22-04-2016 SRM_RS13475 f1ecb5b78106b6e48267fd38cadfbce9 616 PANTHER PTHR10357:SF11 161 494 8.8E-80 T 22-04-2016 SRM_RS13475 f1ecb5b78106b6e48267fd38cadfbce9 616 SUPERFAMILY SSF81296 24 114 1.15E-25 T 22-04-2016 IPR014756 Immunoglobulin E-set SRM_RS13475 f1ecb5b78106b6e48267fd38cadfbce9 616 Gene3D G3DSA:2.60.40.1180 538 615 9.9E-29 T 22-04-2016 IPR013780 Glycosyl hydrolase, all-beta SRM_RS13475 f1ecb5b78106b6e48267fd38cadfbce9 616 SUPERFAMILY SSF51011 538 614 3.12E-16 T 22-04-2016 SRM_RS13475 f1ecb5b78106b6e48267fd38cadfbce9 616 SUPERFAMILY SSF51445 124 536 2.43E-92 T 22-04-2016 IPR017853 Glycoside hydrolase superfamily SRM_RS13475 f1ecb5b78106b6e48267fd38cadfbce9 616 Pfam PF09087 Cyclomaltodextrinase, N-terminal 27 113 2.7E-25 T 22-04-2016 IPR015171 Cyclomaltodextrinase, N-terminal UniPathway: UPA00153 SRM_RS15650 9ca68edfc9cb755e90bfa0183415429a 331 SMART SM00354 2 72 3.2E-22 T 22-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 SRM_RS15650 9ca68edfc9cb755e90bfa0183415429a 331 PANTHER PTHR30146 1 329 8.3E-113 T 22-04-2016 SRM_RS15650 9ca68edfc9cb755e90bfa0183415429a 331 Pfam PF00356 Bacterial regulatory proteins, lacI family 4 49 1.0E-15 T 22-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 SRM_RS15650 9ca68edfc9cb755e90bfa0183415429a 331 Gene3D G3DSA:3.40.50.2300 59 169 8.5E-31 T 22-04-2016 SRM_RS15650 9ca68edfc9cb755e90bfa0183415429a 331 SUPERFAMILY SSF47413 2 60 4.69E-17 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 SRM_RS15650 9ca68edfc9cb755e90bfa0183415429a 331 Gene3D G3DSA:1.10.260.40 3 58 1.5E-22 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 SRM_RS15650 9ca68edfc9cb755e90bfa0183415429a 331 SUPERFAMILY SSF53822 61 328 2.16E-76 T 22-04-2016 IPR028082 Periplasmic binding protein-like I SRM_RS15650 9ca68edfc9cb755e90bfa0183415429a 331 Gene3D G3DSA:3.40.50.2300 170 328 2.8E-64 T 22-04-2016 SRM_RS15650 9ca68edfc9cb755e90bfa0183415429a 331 Pfam PF13377 Periplasmic binding protein-like domain 166 326 9.6E-42 T 22-04-2016 SRM_RS09455 fe69b138af82d8a2388862ce40aeaf6d 437 SUPERFAMILY SSF63411 250 435 4.15E-38 T 22-04-2016 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 SRM_RS09455 fe69b138af82d8a2388862ce40aeaf6d 437 ProSitePatterns PS00143 Insulinase family, zinc-binding region signature. 57 80 - T 22-04-2016 IPR001431 Peptidase M16, zinc-binding site GO:0004222|GO:0006508 SRM_RS09455 fe69b138af82d8a2388862ce40aeaf6d 437 PANTHER PTHR11851 25 436 9.7E-124 T 22-04-2016 SRM_RS09455 fe69b138af82d8a2388862ce40aeaf6d 437 SUPERFAMILY SSF63411 31 242 3.32E-56 T 22-04-2016 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 SRM_RS09455 fe69b138af82d8a2388862ce40aeaf6d 437 Gene3D G3DSA:3.30.830.10 256 430 2.3E-28 T 22-04-2016 IPR011237 Peptidase M16 domain GO:0046872 SRM_RS09455 fe69b138af82d8a2388862ce40aeaf6d 437 Pfam PF00675 Insulinase (Peptidase family M16) 42 184 1.4E-24 T 22-04-2016 IPR011765 Peptidase M16, N-terminal SRM_RS09455 fe69b138af82d8a2388862ce40aeaf6d 437 Pfam PF05193 Peptidase M16 inactive domain 193 370 3.1E-34 T 22-04-2016 IPR007863 Peptidase M16, C-terminal SRM_RS09455 fe69b138af82d8a2388862ce40aeaf6d 437 Gene3D G3DSA:3.30.830.10 32 247 5.2E-51 T 22-04-2016 IPR011237 Peptidase M16 domain GO:0046872 SRM_RS09455 fe69b138af82d8a2388862ce40aeaf6d 437 PANTHER PTHR11851:SF136 25 436 9.7E-124 T 22-04-2016 SRM_RS01060 a08b1c8a2c67c5354f035260c4299cd0 1298 SUPERFAMILY SSF52540 655 913 3.32E-58 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SRM_RS01060 a08b1c8a2c67c5354f035260c4299cd0 1298 SUPERFAMILY SSF52540 498 594 6.2E-9 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SRM_RS01060 a08b1c8a2c67c5354f035260c4299cd0 1298 Gene3D G3DSA:3.30.2060.10 307 384 1.5E-12 T 22-04-2016 SRM_RS01060 a08b1c8a2c67c5354f035260c4299cd0 1298 Pfam PF00271 Helicase conserved C-terminal domain 936 1039 3.8E-16 T 22-04-2016 IPR001650 Helicase, C-terminal SRM_RS01060 a08b1c8a2c67c5354f035260c4299cd0 1298 SMART SM00982 1142 1243 9.1E-27 T 22-04-2016 IPR005118 Transcription-repair-coupling factor, C-terminal domain GO:0006281 SRM_RS01060 a08b1c8a2c67c5354f035260c4299cd0 1298 PANTHER PTHR14025:SF21 528 1224 0.0 T 22-04-2016 SRM_RS01060 a08b1c8a2c67c5354f035260c4299cd0 1298 SUPERFAMILY SSF143517 1129 1285 1.09E-28 T 22-04-2016 SRM_RS01060 a08b1c8a2c67c5354f035260c4299cd0 1298 Gene3D G3DSA:3.40.50.300 717 913 8.7E-53 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SRM_RS01060 a08b1c8a2c67c5354f035260c4299cd0 1298 SUPERFAMILY SSF141259 601 677 5.89E-19 T 22-04-2016 IPR003711 CarD-like/TRCF domain SRM_RS01060 a08b1c8a2c67c5354f035260c4299cd0 1298 SMART SM00487 729 919 4.8E-31 T 22-04-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain SRM_RS01060 a08b1c8a2c67c5354f035260c4299cd0 1298 Pfam PF02559 CarD-like/TRCF domain 609 704 1.7E-25 T 22-04-2016 IPR003711 CarD-like/TRCF domain SRM_RS01060 a08b1c8a2c67c5354f035260c4299cd0 1298 Gene3D G3DSA:3.40.50.300 914 1093 3.4E-35 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SRM_RS01060 a08b1c8a2c67c5354f035260c4299cd0 1298 Pfam PF03461 TRCF domain 1146 1230 1.9E-22 T 22-04-2016 IPR005118 Transcription-repair-coupling factor, C-terminal domain GO:0006281 SRM_RS01060 a08b1c8a2c67c5354f035260c4299cd0 1298 SUPERFAMILY SSF52540 911 1120 7.99E-42 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SRM_RS01060 a08b1c8a2c67c5354f035260c4299cd0 1298 TIGRFAM TIGR00580 mfd: transcription-repair coupling factor 405 1214 6.4E-278 T 22-04-2016 IPR004576 Transcription-repair coupling factor GO:0003684|GO:0005524|GO:0006281 SRM_RS01060 a08b1c8a2c67c5354f035260c4299cd0 1298 SMART SM00490 955 1040 3.9E-19 T 22-04-2016 IPR001650 Helicase, C-terminal SRM_RS01060 a08b1c8a2c67c5354f035260c4299cd0 1298 SMART SM01058 608 705 2.8E-37 T 22-04-2016 IPR003711 CarD-like/TRCF domain SRM_RS01060 a08b1c8a2c67c5354f035260c4299cd0 1298 Pfam PF00270 DEAD/DEAH box helicase 734 893 3.5E-18 T 22-04-2016 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 SRM_RS01060 a08b1c8a2c67c5354f035260c4299cd0 1298 Hamap MF_00969 Transcription-repair-coupling factor [mfd]. 205 1250 28.012 T 22-04-2016 IPR004576 Transcription-repair coupling factor GO:0003684|GO:0005524|GO:0006281 SRM_RS01060 a08b1c8a2c67c5354f035260c4299cd0 1298 PANTHER PTHR14025 528 1224 0.0 T 22-04-2016 SRM_RS01060 a08b1c8a2c67c5354f035260c4299cd0 1298 SUPERFAMILY SSF52540 188 487 3.26E-59 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SRM_RS04550 72a07c454ee4176d0be29fc601eeff97 327 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 4 23 5.5E-11 T 22-04-2016 SRM_RS04550 72a07c454ee4176d0be29fc601eeff97 327 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 239 255 5.5E-11 T 22-04-2016 SRM_RS04550 72a07c454ee4176d0be29fc601eeff97 327 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 270 292 5.5E-11 T 22-04-2016 SRM_RS04550 72a07c454ee4176d0be29fc601eeff97 327 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 156 174 5.5E-11 T 22-04-2016 SRM_RS04550 72a07c454ee4176d0be29fc601eeff97 327 PANTHER PTHR23023 1 291 2.4E-29 T 22-04-2016 SRM_RS04550 72a07c454ee4176d0be29fc601eeff97 327 Gene3D G3DSA:3.50.50.60 1 118 4.7E-20 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SRM_RS04550 72a07c454ee4176d0be29fc601eeff97 327 Pfam PF13738 Pyridine nucleotide-disulphide oxidoreductase 5 289 1.6E-81 T 22-04-2016 SRM_RS04550 72a07c454ee4176d0be29fc601eeff97 327 Gene3D G3DSA:3.50.50.60 119 313 7.0E-24 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SRM_RS04550 72a07c454ee4176d0be29fc601eeff97 327 TIGRFAM TIGR04018 Bthiol_YpdA: putative bacillithiol system oxidoreductase, YpdA family 3 318 2.3E-135 T 22-04-2016 IPR023856 Bacillithiol biosynthesis thiol disulphide oxidoreductase, YpdA SRM_RS04550 72a07c454ee4176d0be29fc601eeff97 327 SUPERFAMILY SSF51905 1 315 2.2E-37 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SRM_RS04550 72a07c454ee4176d0be29fc601eeff97 327 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 3 25 8.5E-17 T 22-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 SRM_RS04550 72a07c454ee4176d0be29fc601eeff97 327 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 280 298 8.5E-17 T 22-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 SRM_RS04550 72a07c454ee4176d0be29fc601eeff97 327 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 209 225 8.5E-17 T 22-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 SRM_RS04550 72a07c454ee4176d0be29fc601eeff97 327 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 117 125 8.5E-17 T 22-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 SRM_RS04550 72a07c454ee4176d0be29fc601eeff97 327 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 152 176 8.5E-17 T 22-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 SRM_RS03465 73cef56f8658da7da1d01c9141dc71fd 231 Gene3D G3DSA:3.40.50.1360 5 143 6.5E-58 T 22-04-2016 SRM_RS03465 73cef56f8658da7da1d01c9141dc71fd 231 Gene3D G3DSA:3.30.70.260 144 207 4.3E-24 T 22-04-2016 SRM_RS03465 73cef56f8658da7da1d01c9141dc71fd 231 Pfam PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) 52 222 2.1E-63 T 22-04-2016 IPR004788 Ribose 5-phosphate isomerase, type A GO:0004751|GO:0009052 KEGG: 00030+5.3.1.6|KEGG: 00051+5.3.1.6|KEGG: 00710+5.3.1.6|MetaCyc: PWY-1861|MetaCyc: PWY-5723|UniPathway: UPA00115 SRM_RS03465 73cef56f8658da7da1d01c9141dc71fd 231 Hamap MF_00170 Ribose-5-phosphate isomerase A [rpiA]. 3 228 32.901 T 22-04-2016 IPR020672 Ribose-5-phosphate isomerase, type A, subgroup GO:0004751|GO:0009052 KEGG: 00030+5.3.1.6|KEGG: 00051+5.3.1.6|KEGG: 00710+5.3.1.6|MetaCyc: PWY-1861|MetaCyc: PWY-5723|UniPathway: UPA00115 SRM_RS03465 73cef56f8658da7da1d01c9141dc71fd 231 SUPERFAMILY SSF75445 132 210 5.23E-21 T 22-04-2016 SRM_RS03465 73cef56f8658da7da1d01c9141dc71fd 231 SUPERFAMILY SSF100950 5 149 1.73E-44 T 22-04-2016 SRM_RS03465 73cef56f8658da7da1d01c9141dc71fd 231 PANTHER PTHR11934 1 231 1.3E-102 T 22-04-2016 IPR004788 Ribose 5-phosphate isomerase, type A GO:0004751|GO:0009052 KEGG: 00030+5.3.1.6|KEGG: 00051+5.3.1.6|KEGG: 00710+5.3.1.6|MetaCyc: PWY-1861|MetaCyc: PWY-5723|UniPathway: UPA00115 SRM_RS03465 73cef56f8658da7da1d01c9141dc71fd 231 TIGRFAM TIGR00021 rpiA: ribose 5-phosphate isomerase A 7 224 1.6E-77 T 22-04-2016 IPR004788 Ribose 5-phosphate isomerase, type A GO:0004751|GO:0009052 KEGG: 00030+5.3.1.6|KEGG: 00051+5.3.1.6|KEGG: 00710+5.3.1.6|MetaCyc: PWY-1861|MetaCyc: PWY-5723|UniPathway: UPA00115 SRM_RS08495 655976a7ced8bde6b84a108670a5bae1 559 SUPERFAMILY SSF55785 125 244 3.54E-8 T 22-04-2016 IPR000014 PAS domain SRM_RS08495 655976a7ced8bde6b84a108670a5bae1 559 Gene3D G3DSA:3.40.50.2300 2 128 6.5E-33 T 22-04-2016 SRM_RS08495 655976a7ced8bde6b84a108670a5bae1 559 SUPERFAMILY SSF52172 3 143 1.71E-35 T 22-04-2016 IPR011006 CheY-like superfamily SRM_RS08495 655976a7ced8bde6b84a108670a5bae1 559 SMART SM00448 5 117 1.3E-30 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SRM_RS08495 655976a7ced8bde6b84a108670a5bae1 559 Gene3D G3DSA:3.30.450.20 129 245 3.6E-10 T 22-04-2016 SRM_RS08495 655976a7ced8bde6b84a108670a5bae1 559 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 475 484 - T 22-04-2016 IPR025944 Sigma-54 interaction domain, conserved site SRM_RS08495 655976a7ced8bde6b84a108670a5bae1 559 SUPERFAMILY SSF46689 511 558 1.08E-11 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 SRM_RS08495 655976a7ced8bde6b84a108670a5bae1 559 PANTHER PTHR32071 232 559 2.1E-152 T 22-04-2016 SRM_RS08495 655976a7ced8bde6b84a108670a5bae1 559 PANTHER PTHR32071 6 149 2.1E-152 T 22-04-2016 SRM_RS08495 655976a7ced8bde6b84a108670a5bae1 559 Pfam PF08448 PAS fold 142 247 3.5E-5 T 22-04-2016 IPR013656 PAS fold-4 SRM_RS08495 655976a7ced8bde6b84a108670a5bae1 559 Gene3D G3DSA:1.10.8.60 435 512 9.1E-25 T 22-04-2016 SRM_RS08495 655976a7ced8bde6b84a108670a5bae1 559 Pfam PF00158 Sigma-54 interaction domain 262 427 5.0E-67 T 22-04-2016 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 SRM_RS08495 655976a7ced8bde6b84a108670a5bae1 559 Gene3D G3DSA:1.10.10.60 519 559 4.6E-17 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 SRM_RS08495 655976a7ced8bde6b84a108670a5bae1 559 SUPERFAMILY SSF52540 261 505 7.88E-71 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SRM_RS08495 655976a7ced8bde6b84a108670a5bae1 559 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 522 539 3.8E-13 T 22-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 SRM_RS08495 655976a7ced8bde6b84a108670a5bae1 559 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 539 559 3.8E-13 T 22-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 SRM_RS08495 655976a7ced8bde6b84a108670a5bae1 559 Pfam PF02954 Bacterial regulatory protein, Fis family 520 556 7.4E-16 T 22-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 SRM_RS08495 655976a7ced8bde6b84a108670a5bae1 559 Pfam PF00072 Response regulator receiver domain 7 117 5.8E-22 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SRM_RS08495 655976a7ced8bde6b84a108670a5bae1 559 Gene3D G3DSA:3.40.50.300 258 434 2.8E-57 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SRM_RS08495 655976a7ced8bde6b84a108670a5bae1 559 SMART SM00382 282 424 3.8E-11 T 22-04-2016 IPR003593 AAA+ ATPase domain SRM_RS08495 655976a7ced8bde6b84a108670a5bae1 559 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 348 363 - T 22-04-2016 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 SRM_RS08495 655976a7ced8bde6b84a108670a5bae1 559 SMART SM00091 135 202 3.6E-4 T 22-04-2016 IPR000014 PAS domain SRM_RS14655 a041fd086b904b46c0075309cf0851cc 215 Pfam PF02107 Flagellar L-ring protein 39 187 3.3E-34 T 22-04-2016 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 SRM_RS14655 a041fd086b904b46c0075309cf0851cc 215 PANTHER PTHR34933 41 190 7.2E-25 T 22-04-2016 SRM_RS14655 a041fd086b904b46c0075309cf0851cc 215 PRINTS PR01008 Flagellar L-ring protein signature 120 135 2.8E-12 T 22-04-2016 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 SRM_RS14655 a041fd086b904b46c0075309cf0851cc 215 PRINTS PR01008 Flagellar L-ring protein signature 146 162 2.8E-12 T 22-04-2016 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 SRM_RS14655 a041fd086b904b46c0075309cf0851cc 215 PRINTS PR01008 Flagellar L-ring protein signature 51 63 2.8E-12 T 22-04-2016 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 SRM_RS14655 a041fd086b904b46c0075309cf0851cc 215 PRINTS PR01008 Flagellar L-ring protein signature 167 181 2.8E-12 T 22-04-2016 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 SRM_RS07330 f78ee6722270c22d26a2f0641927a3ef 560 Pfam PF01039 Carboxyl transferase domain 51 549 8.2E-148 T 22-04-2016 IPR000022 Carboxyl transferase KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 SRM_RS07330 f78ee6722270c22d26a2f0641927a3ef 560 Gene3D G3DSA:3.90.226.10 282 548 1.2E-86 T 22-04-2016 IPR029045 ClpP/crotonase-like domain SRM_RS07330 f78ee6722270c22d26a2f0641927a3ef 560 Gene3D G3DSA:3.90.226.10 33 269 1.7E-66 T 22-04-2016 IPR029045 ClpP/crotonase-like domain SRM_RS07330 f78ee6722270c22d26a2f0641927a3ef 560 SUPERFAMILY SSF52096 282 548 1.57E-82 T 22-04-2016 IPR029045 ClpP/crotonase-like domain SRM_RS07330 f78ee6722270c22d26a2f0641927a3ef 560 PANTHER PTHR22855 370 560 2.9E-258 T 22-04-2016 SRM_RS07330 f78ee6722270c22d26a2f0641927a3ef 560 PANTHER PTHR22855 14 353 2.9E-258 T 22-04-2016 SRM_RS07330 f78ee6722270c22d26a2f0641927a3ef 560 SUPERFAMILY SSF52096 25 270 3.13E-63 T 22-04-2016 IPR029045 ClpP/crotonase-like domain SRM_RS07330 f78ee6722270c22d26a2f0641927a3ef 560 PANTHER PTHR22855:SF13 370 560 2.9E-258 T 22-04-2016 SRM_RS07330 f78ee6722270c22d26a2f0641927a3ef 560 PANTHER PTHR22855:SF13 14 353 2.9E-258 T 22-04-2016 SRM_RS02350 7aa970baca6504699b4e786aff8ff5eb 296 SUPERFAMILY SSF53474 12 295 3.81E-77 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold SRM_RS02350 7aa970baca6504699b4e786aff8ff5eb 296 PRINTS PR00412 Epoxide hydrolase signature 42 60 5.3E-26 T 22-04-2016 IPR000639 Epoxide hydrolase-like GO:0003824 SRM_RS02350 7aa970baca6504699b4e786aff8ff5eb 296 PRINTS PR00412 Epoxide hydrolase signature 122 135 5.3E-26 T 22-04-2016 IPR000639 Epoxide hydrolase-like GO:0003824 SRM_RS02350 7aa970baca6504699b4e786aff8ff5eb 296 PRINTS PR00412 Epoxide hydrolase signature 271 293 5.3E-26 T 22-04-2016 IPR000639 Epoxide hydrolase-like GO:0003824 SRM_RS02350 7aa970baca6504699b4e786aff8ff5eb 296 PRINTS PR00412 Epoxide hydrolase signature 108 121 5.3E-26 T 22-04-2016 IPR000639 Epoxide hydrolase-like GO:0003824 SRM_RS02350 7aa970baca6504699b4e786aff8ff5eb 296 PRINTS PR00412 Epoxide hydrolase signature 62 77 5.3E-26 T 22-04-2016 IPR000639 Epoxide hydrolase-like GO:0003824 SRM_RS02350 7aa970baca6504699b4e786aff8ff5eb 296 PRINTS PR00412 Epoxide hydrolase signature 238 254 5.3E-26 T 22-04-2016 IPR000639 Epoxide hydrolase-like GO:0003824 SRM_RS02350 7aa970baca6504699b4e786aff8ff5eb 296 Pfam PF00561 alpha/beta hydrolase fold 36 282 4.6E-28 T 22-04-2016 IPR000073 Alpha/beta hydrolase fold-1 SRM_RS02350 7aa970baca6504699b4e786aff8ff5eb 296 PRINTS PR00111 Alpha/beta hydrolase fold signature 122 135 9.7E-7 T 22-04-2016 IPR000073 Alpha/beta hydrolase fold-1 SRM_RS02350 7aa970baca6504699b4e786aff8ff5eb 296 PRINTS PR00111 Alpha/beta hydrolase fold signature 108 121 9.7E-7 T 22-04-2016 IPR000073 Alpha/beta hydrolase fold-1 SRM_RS02350 7aa970baca6504699b4e786aff8ff5eb 296 PRINTS PR00111 Alpha/beta hydrolase fold signature 62 77 9.7E-7 T 22-04-2016 IPR000073 Alpha/beta hydrolase fold-1 SRM_RS02350 7aa970baca6504699b4e786aff8ff5eb 296 PANTHER PTHR10992:SF793 17 296 3.5E-92 T 22-04-2016 SRM_RS02350 7aa970baca6504699b4e786aff8ff5eb 296 PANTHER PTHR10992 17 296 3.5E-92 T 22-04-2016 SRM_RS02350 7aa970baca6504699b4e786aff8ff5eb 296 Gene3D G3DSA:3.40.50.1820 13 295 3.6E-85 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold SRM_RS03270 df0e77ed22485e8cf8d977d849436e0c 735 SMART SM00388 531 594 5.2E-9 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SRM_RS03270 df0e77ed22485e8cf8d977d849436e0c 735 PRINTS PR00344 Bacterial sensor protein C-terminal signature 694 712 6.3E-7 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SRM_RS03270 df0e77ed22485e8cf8d977d849436e0c 735 PRINTS PR00344 Bacterial sensor protein C-terminal signature 665 679 6.3E-7 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SRM_RS03270 df0e77ed22485e8cf8d977d849436e0c 735 Gene3D G3DSA:3.30.565.10 597 729 2.9E-32 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SRM_RS03270 df0e77ed22485e8cf8d977d849436e0c 735 SUPERFAMILY SSF55785 45 147 2.74E-16 T 22-04-2016 IPR000014 PAS domain SRM_RS03270 df0e77ed22485e8cf8d977d849436e0c 735 PANTHER PTHR24423 529 729 4.4E-93 T 22-04-2016 SRM_RS03270 df0e77ed22485e8cf8d977d849436e0c 735 PANTHER PTHR24423 128 404 4.4E-93 T 22-04-2016 SRM_RS03270 df0e77ed22485e8cf8d977d849436e0c 735 SUPERFAMILY SSF55785 384 516 1.03E-16 T 22-04-2016 IPR000014 PAS domain SRM_RS03270 df0e77ed22485e8cf8d977d849436e0c 735 SUPERFAMILY SSF47384 519 592 6.67E-12 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SRM_RS03270 df0e77ed22485e8cf8d977d849436e0c 735 Gene3D G3DSA:3.30.450.20 35 137 3.5E-23 T 22-04-2016 SRM_RS03270 df0e77ed22485e8cf8d977d849436e0c 735 Gene3D G3DSA:3.30.450.20 389 517 5.5E-22 T 22-04-2016 SRM_RS03270 df0e77ed22485e8cf8d977d849436e0c 735 SUPERFAMILY SSF55785 135 259 3.21E-25 T 22-04-2016 IPR000014 PAS domain SRM_RS03270 df0e77ed22485e8cf8d977d849436e0c 735 Gene3D G3DSA:1.10.287.130 523 590 3.2E-9 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SRM_RS03270 df0e77ed22485e8cf8d977d849436e0c 735 Pfam PF08448 PAS fold 158 266 2.6E-20 T 22-04-2016 IPR013656 PAS fold-4 SRM_RS03270 df0e77ed22485e8cf8d977d849436e0c 735 Pfam PF08448 PAS fold 410 519 1.5E-14 T 22-04-2016 IPR013656 PAS fold-4 SRM_RS03270 df0e77ed22485e8cf8d977d849436e0c 735 Pfam PF08448 PAS fold 40 140 3.5E-15 T 22-04-2016 IPR013656 PAS fold-4 SRM_RS03270 df0e77ed22485e8cf8d977d849436e0c 735 Pfam PF13188 PAS domain 276 326 1.2E-6 T 22-04-2016 IPR000014 PAS domain SRM_RS03270 df0e77ed22485e8cf8d977d849436e0c 735 SMART SM00091 34 100 1.2E-7 T 22-04-2016 IPR000014 PAS domain SRM_RS03270 df0e77ed22485e8cf8d977d849436e0c 735 SMART SM00091 399 472 3.1 T 22-04-2016 IPR000014 PAS domain SRM_RS03270 df0e77ed22485e8cf8d977d849436e0c 735 SMART SM00091 151 217 1.2E-9 T 22-04-2016 IPR000014 PAS domain SRM_RS03270 df0e77ed22485e8cf8d977d849436e0c 735 SMART SM00091 276 342 4.0E-7 T 22-04-2016 IPR000014 PAS domain SRM_RS03270 df0e77ed22485e8cf8d977d849436e0c 735 Pfam PF00512 His Kinase A (phospho-acceptor) domain 532 593 7.1E-9 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SRM_RS03270 df0e77ed22485e8cf8d977d849436e0c 735 SUPERFAMILY SSF55874 597 729 2.23E-29 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SRM_RS03270 df0e77ed22485e8cf8d977d849436e0c 735 Gene3D G3DSA:3.30.450.20 261 385 1.2E-21 T 22-04-2016 SRM_RS03270 df0e77ed22485e8cf8d977d849436e0c 735 SUPERFAMILY SSF55785 261 385 1.05E-21 T 22-04-2016 IPR000014 PAS domain SRM_RS03270 df0e77ed22485e8cf8d977d849436e0c 735 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 631 729 3.0E-19 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SRM_RS03270 df0e77ed22485e8cf8d977d849436e0c 735 Gene3D G3DSA:3.30.450.20 138 258 3.1E-27 T 22-04-2016 SRM_RS03270 df0e77ed22485e8cf8d977d849436e0c 735 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 148 270 3.8E-20 T 22-04-2016 IPR000014 PAS domain SRM_RS03270 df0e77ed22485e8cf8d977d849436e0c 735 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 274 394 1.5E-19 T 22-04-2016 IPR000014 PAS domain SRM_RS03270 df0e77ed22485e8cf8d977d849436e0c 735 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 35 146 1.2E-8 T 22-04-2016 IPR000014 PAS domain SRM_RS03270 df0e77ed22485e8cf8d977d849436e0c 735 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 399 525 3.5E-10 T 22-04-2016 IPR000014 PAS domain SRM_RS03270 df0e77ed22485e8cf8d977d849436e0c 735 SMART SM00387 631 734 2.3E-28 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SRM_RS08120 3902fe543576a387f4cbfc29bc250a72 408 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 18 36 7.1E-5 T 22-04-2016 SRM_RS08120 3902fe543576a387f4cbfc29bc250a72 408 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 119 141 7.1E-5 T 22-04-2016 SRM_RS08120 3902fe543576a387f4cbfc29bc250a72 408 SUPERFAMILY SSF51905 331 389 2.78E-39 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SRM_RS08120 3902fe543576a387f4cbfc29bc250a72 408 SUPERFAMILY SSF51905 17 238 2.78E-39 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SRM_RS08120 3902fe543576a387f4cbfc29bc250a72 408 PANTHER PTHR13847 17 390 4.9E-59 T 22-04-2016 SRM_RS08120 3902fe543576a387f4cbfc29bc250a72 408 Gene3D G3DSA:3.30.9.10 113 162 6.1E-7 T 22-04-2016 SRM_RS08120 3902fe543576a387f4cbfc29bc250a72 408 Gene3D G3DSA:3.30.9.10 237 327 6.1E-7 T 22-04-2016 SRM_RS08120 3902fe543576a387f4cbfc29bc250a72 408 Pfam PF01266 FAD dependent oxidoreductase 18 370 1.3E-53 T 22-04-2016 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 SRM_RS08120 3902fe543576a387f4cbfc29bc250a72 408 Gene3D G3DSA:3.50.50.60 163 236 1.1E-46 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SRM_RS08120 3902fe543576a387f4cbfc29bc250a72 408 Gene3D G3DSA:3.50.50.60 331 390 1.1E-46 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SRM_RS08120 3902fe543576a387f4cbfc29bc250a72 408 Gene3D G3DSA:3.50.50.60 9 98 1.1E-46 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SRM_RS15065 c82e851a76d21d7e7f79df254e2c8a73 706 PANTHER PTHR32552:SF15 476 579 3.7E-45 T 22-04-2016 SRM_RS15065 c82e851a76d21d7e7f79df254e2c8a73 706 PANTHER PTHR32552:SF15 604 706 3.7E-45 T 22-04-2016 SRM_RS15065 c82e851a76d21d7e7f79df254e2c8a73 706 PANTHER PTHR32552:SF15 36 441 3.7E-45 T 22-04-2016 SRM_RS15065 c82e851a76d21d7e7f79df254e2c8a73 706 Gene3D G3DSA:2.40.170.20 165 706 7.9E-76 T 22-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 SRM_RS15065 c82e851a76d21d7e7f79df254e2c8a73 706 Gene3D G3DSA:2.170.130.10 45 164 3.2E-36 T 22-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 SRM_RS15065 c82e851a76d21d7e7f79df254e2c8a73 706 Pfam PF07715 TonB-dependent Receptor Plug Domain 61 162 1.4E-23 T 22-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 SRM_RS15065 c82e851a76d21d7e7f79df254e2c8a73 706 PANTHER PTHR32552 476 579 3.7E-45 T 22-04-2016 SRM_RS15065 c82e851a76d21d7e7f79df254e2c8a73 706 PANTHER PTHR32552 604 706 3.7E-45 T 22-04-2016 SRM_RS15065 c82e851a76d21d7e7f79df254e2c8a73 706 PANTHER PTHR32552 36 441 3.7E-45 T 22-04-2016 SRM_RS15065 c82e851a76d21d7e7f79df254e2c8a73 706 Pfam PF00593 TonB dependent receptor 407 703 1.6E-24 T 22-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 SRM_RS15065 c82e851a76d21d7e7f79df254e2c8a73 706 SUPERFAMILY SSF56935 45 703 7.94E-104 T 22-04-2016 SRM_RS04850 301cd26468ecc8f521027f904e33ded3 1024 Gene3D G3DSA:1.10.3850.10 800 1014 5.9E-64 T 22-04-2016 SRM_RS04850 301cd26468ecc8f521027f904e33ded3 1024 SUPERFAMILY SSF82714 709 793 2.35E-17 T 22-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains SRM_RS04850 301cd26468ecc8f521027f904e33ded3 1024 SUPERFAMILY SSF82693 554 657 7.85E-13 T 22-04-2016 SRM_RS04850 301cd26468ecc8f521027f904e33ded3 1024 SUPERFAMILY SSF82714 182 263 7.46E-18 T 22-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains SRM_RS04850 301cd26468ecc8f521027f904e33ded3 1024 SUPERFAMILY SSF82866 290 490 5.75E-48 T 22-04-2016 SRM_RS04850 301cd26468ecc8f521027f904e33ded3 1024 SUPERFAMILY SSF82693 136 181 3.92E-16 T 22-04-2016 SRM_RS04850 301cd26468ecc8f521027f904e33ded3 1024 SUPERFAMILY SSF82693 268 324 3.92E-16 T 22-04-2016 SRM_RS04850 301cd26468ecc8f521027f904e33ded3 1024 SUPERFAMILY SSF82693 40 133 7.32E-28 T 22-04-2016 SRM_RS04850 301cd26468ecc8f521027f904e33ded3 1024 Gene3D G3DSA:1.20.1640.10 288 498 4.1E-58 T 22-04-2016 SRM_RS04850 301cd26468ecc8f521027f904e33ded3 1024 Gene3D G3DSA:3.30.2090.10 181 263 7.7E-20 T 22-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains SRM_RS04850 301cd26468ecc8f521027f904e33ded3 1024 Gene3D G3DSA:3.30.2090.10 708 793 1.2E-18 T 22-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains SRM_RS04850 301cd26468ecc8f521027f904e33ded3 1024 PRINTS PR00702 Acriflavin resistance protein family signature 463 486 1.5E-72 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 SRM_RS04850 301cd26468ecc8f521027f904e33ded3 1024 PRINTS PR00702 Acriflavin resistance protein family signature 541 558 1.5E-72 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 SRM_RS04850 301cd26468ecc8f521027f904e33ded3 1024 PRINTS PR00702 Acriflavin resistance protein family signature 612 626 1.5E-72 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 SRM_RS04850 301cd26468ecc8f521027f904e33ded3 1024 PRINTS PR00702 Acriflavin resistance protein family signature 38 56 1.5E-72 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 SRM_RS04850 301cd26468ecc8f521027f904e33ded3 1024 PRINTS PR00702 Acriflavin resistance protein family signature 330 353 1.5E-72 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 SRM_RS04850 301cd26468ecc8f521027f904e33ded3 1024 PRINTS PR00702 Acriflavin resistance protein family signature 10 34 1.5E-72 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 SRM_RS04850 301cd26468ecc8f521027f904e33ded3 1024 PRINTS PR00702 Acriflavin resistance protein family signature 357 378 1.5E-72 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 SRM_RS04850 301cd26468ecc8f521027f904e33ded3 1024 PRINTS PR00702 Acriflavin resistance protein family signature 385 409 1.5E-72 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 SRM_RS04850 301cd26468ecc8f521027f904e33ded3 1024 PRINTS PR00702 Acriflavin resistance protein family signature 438 461 1.5E-72 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 SRM_RS04850 301cd26468ecc8f521027f904e33ded3 1024 PANTHER PTHR32063:SF14 1 1016 0.0 T 22-04-2016 SRM_RS04850 301cd26468ecc8f521027f904e33ded3 1024 Gene3D G3DSA:3.30.70.1430 561 658 2.3E-8 T 22-04-2016 SRM_RS04850 301cd26468ecc8f521027f904e33ded3 1024 Pfam PF00873 AcrB/AcrD/AcrF family 4 1012 4.2E-292 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 SRM_RS04850 301cd26468ecc8f521027f904e33ded3 1024 SUPERFAMILY SSF82866 795 1013 8.24E-50 T 22-04-2016 SRM_RS04850 301cd26468ecc8f521027f904e33ded3 1024 PANTHER PTHR32063 1 1016 0.0 T 22-04-2016 SRM_RS04850 301cd26468ecc8f521027f904e33ded3 1024 Gene3D G3DSA:3.30.70.1430 40 140 2.4E-34 T 22-04-2016 SRM_RS13835 36d73157dbf86ad2a4cd222c55ffae6a 255 PANTHER PTHR24220 17 228 1.5E-50 T 22-04-2016 SRM_RS13835 36d73157dbf86ad2a4cd222c55ffae6a 255 PANTHER PTHR24220:SF160 17 228 1.5E-50 T 22-04-2016 SRM_RS13835 36d73157dbf86ad2a4cd222c55ffae6a 255 SMART SM00382 39 222 4.2E-10 T 22-04-2016 IPR003593 AAA+ ATPase domain SRM_RS13835 36d73157dbf86ad2a4cd222c55ffae6a 255 Gene3D G3DSA:3.40.50.300 10 230 5.3E-42 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SRM_RS13835 36d73157dbf86ad2a4cd222c55ffae6a 255 SUPERFAMILY SSF52540 14 230 2.08E-40 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SRM_RS13835 36d73157dbf86ad2a4cd222c55ffae6a 255 Pfam PF00005 ABC transporter 34 175 6.4E-18 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 SRM_RS09115 e71c3d2d3f6d12c4f8d37f48f5ba7bcb 302 Pfam PF16916 Dimerisation domain of Zinc Transporter 219 279 2.5E-14 T 22-04-2016 IPR027470 Cation efflux protein, cytoplasmic domain SRM_RS09115 e71c3d2d3f6d12c4f8d37f48f5ba7bcb 302 SUPERFAMILY SSF161111 3 197 8.24E-48 T 22-04-2016 SRM_RS09115 e71c3d2d3f6d12c4f8d37f48f5ba7bcb 302 Pfam PF01545 Cation efflux family 2 195 7.2E-39 T 22-04-2016 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 SRM_RS09115 e71c3d2d3f6d12c4f8d37f48f5ba7bcb 302 PANTHER PTHR11562 1 289 3.8E-70 T 22-04-2016 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 SRM_RS09115 e71c3d2d3f6d12c4f8d37f48f5ba7bcb 302 TIGRFAM TIGR01297 CDF: cation diffusion facilitator family transporter 2 281 5.0E-62 T 22-04-2016 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 SRM_RS09115 e71c3d2d3f6d12c4f8d37f48f5ba7bcb 302 PANTHER PTHR11562:SF55 1 289 3.8E-70 T 22-04-2016 SRM_RS09115 e71c3d2d3f6d12c4f8d37f48f5ba7bcb 302 Gene3D G3DSA:3.30.70.1350 219 280 2.6E-14 T 22-04-2016 IPR027470 Cation efflux protein, cytoplasmic domain SRM_RS09115 e71c3d2d3f6d12c4f8d37f48f5ba7bcb 302 SUPERFAMILY SSF160240 217 279 4.84E-14 T 22-04-2016 SRM_RS09115 e71c3d2d3f6d12c4f8d37f48f5ba7bcb 302 Gene3D G3DSA:1.20.1510.10 3 195 3.8E-42 T 22-04-2016 IPR027469 Cation efflux protein transmembrane domain SRM_RS07665 80015e5cf8129e43fc9c27733983cc88 388 PIRSF PIRSF000808 42 381 2.2E-82 T 22-04-2016 IPR001937 Galactose-1-phosphate uridyl transferase, class I GO:0006012|GO:0008108|GO:0008270 KEGG: 00052+2.7.7.12|KEGG: 00520+2.7.7.12|MetaCyc: PWY-6317|MetaCyc: PWY-6527|UniPathway: UPA00214 SRM_RS07665 80015e5cf8129e43fc9c27733983cc88 388 Pfam PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain 47 224 5.2E-22 T 22-04-2016 IPR005849 Galactose-1-phosphate uridyl transferase, N-terminal GO:0006012|GO:0008108 KEGG: 00052+2.7.7.12|KEGG: 00520+2.7.7.12|MetaCyc: PWY-6317|MetaCyc: PWY-6527|UniPathway: UPA00214 SRM_RS07665 80015e5cf8129e43fc9c27733983cc88 388 PANTHER PTHR11943:SF3 33 377 5.8E-97 T 22-04-2016 SRM_RS07665 80015e5cf8129e43fc9c27733983cc88 388 PANTHER PTHR11943 33 377 5.8E-97 T 22-04-2016 IPR001937 Galactose-1-phosphate uridyl transferase, class I GO:0006012|GO:0008108|GO:0008270 KEGG: 00052+2.7.7.12|KEGG: 00520+2.7.7.12|MetaCyc: PWY-6317|MetaCyc: PWY-6527|UniPathway: UPA00214 SRM_RS07665 80015e5cf8129e43fc9c27733983cc88 388 Gene3D G3DSA:3.30.428.10 92 209 4.4E-39 T 22-04-2016 IPR011146 HIT-like domain GO:0003824 SRM_RS07665 80015e5cf8129e43fc9c27733983cc88 388 SUPERFAMILY SSF54197 47 225 1.28E-40 T 22-04-2016 IPR011146 HIT-like domain GO:0003824 SRM_RS07665 80015e5cf8129e43fc9c27733983cc88 388 TIGRFAM TIGR00209 galT_1: galactose-1-phosphate uridylyltransferase 45 314 4.1E-31 T 22-04-2016 IPR001937 Galactose-1-phosphate uridyl transferase, class I GO:0006012|GO:0008108|GO:0008270 KEGG: 00052+2.7.7.12|KEGG: 00520+2.7.7.12|MetaCyc: PWY-6317|MetaCyc: PWY-6527|UniPathway: UPA00214 SRM_RS07665 80015e5cf8129e43fc9c27733983cc88 388 SUPERFAMILY SSF54197 228 378 5.57E-27 T 22-04-2016 IPR011146 HIT-like domain GO:0003824 SRM_RS07665 80015e5cf8129e43fc9c27733983cc88 388 Gene3D G3DSA:3.30.428.10 210 378 5.7E-51 T 22-04-2016 IPR011146 HIT-like domain GO:0003824 SRM_RS12340 60f0f52ef870880c1d8d4a88867fa946 1021 TIGRFAM TIGR04057 SusC_RagA_signa: TonB-dependent outer membrane receptor, SusC/RagA subfamily, signature region 217 246 1.7E-16 T 22-04-2016 IPR023997 TonB-dependent outer membrane protein SusC/RagA, conserved site UniPathway: UPA00153 SRM_RS12340 60f0f52ef870880c1d8d4a88867fa946 1021 Pfam PF13715 CarboxypepD_reg-like domain 28 115 7.6E-25 T 22-04-2016 SRM_RS12340 60f0f52ef870880c1d8d4a88867fa946 1021 TIGRFAM TIGR04056 OMP_RagA_SusC: TonB-linked outer membrane protein, SusC/RagA family 27 1020 2.0E-215 T 22-04-2016 IPR023996 TonB-dependent outer membrane protein, SusC/RagA UniPathway: UPA00153 SRM_RS12340 60f0f52ef870880c1d8d4a88867fa946 1021 Gene3D G3DSA:2.60.40.1120 27 104 1.8E-21 T 22-04-2016 IPR014766 Carboxypeptidase, regulatory domain SRM_RS12340 60f0f52ef870880c1d8d4a88867fa946 1021 SUPERFAMILY SSF56935 111 264 1.79E-82 T 22-04-2016 SRM_RS12340 60f0f52ef870880c1d8d4a88867fa946 1021 SUPERFAMILY SSF56935 936 1018 1.79E-82 T 22-04-2016 SRM_RS12340 60f0f52ef870880c1d8d4a88867fa946 1021 SUPERFAMILY SSF56935 843 887 1.79E-82 T 22-04-2016 SRM_RS12340 60f0f52ef870880c1d8d4a88867fa946 1021 SUPERFAMILY SSF56935 451 787 1.79E-82 T 22-04-2016 SRM_RS12340 60f0f52ef870880c1d8d4a88867fa946 1021 SUPERFAMILY SSF56935 326 414 1.79E-82 T 22-04-2016 SRM_RS12340 60f0f52ef870880c1d8d4a88867fa946 1021 Gene3D G3DSA:2.170.130.10 112 239 1.3E-18 T 22-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 SRM_RS12340 60f0f52ef870880c1d8d4a88867fa946 1021 Pfam PF07715 TonB-dependent Receptor Plug Domain 128 240 6.8E-17 T 22-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 SRM_RS12340 60f0f52ef870880c1d8d4a88867fa946 1021 SUPERFAMILY SSF49464 26 113 1.31E-20 T 22-04-2016 IPR008969 Carboxypeptidase-like, regulatory domain SRM_RS12340 60f0f52ef870880c1d8d4a88867fa946 1021 Gene3D G3DSA:2.40.170.20 852 902 1.9E-49 T 22-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 SRM_RS12340 60f0f52ef870880c1d8d4a88867fa946 1021 Gene3D G3DSA:2.40.170.20 946 1018 1.9E-49 T 22-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 SRM_RS12340 60f0f52ef870880c1d8d4a88867fa946 1021 Gene3D G3DSA:2.40.170.20 240 263 1.9E-49 T 22-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 SRM_RS12340 60f0f52ef870880c1d8d4a88867fa946 1021 Gene3D G3DSA:2.40.170.20 335 810 1.9E-49 T 22-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 SRM_RS12340 60f0f52ef870880c1d8d4a88867fa946 1021 PANTHER PTHR11532 580 1019 1.9E-200 T 22-04-2016 SRM_RS12340 60f0f52ef870880c1d8d4a88867fa946 1021 PANTHER PTHR11532 522 551 1.9E-200 T 22-04-2016 SRM_RS12340 60f0f52ef870880c1d8d4a88867fa946 1021 PANTHER PTHR11532 12 448 1.9E-200 T 22-04-2016 SRM_RS12340 60f0f52ef870880c1d8d4a88867fa946 1021 PANTHER PTHR11532:SF57 580 1019 1.9E-200 T 22-04-2016 SRM_RS12340 60f0f52ef870880c1d8d4a88867fa946 1021 PANTHER PTHR11532:SF57 522 551 1.9E-200 T 22-04-2016 SRM_RS12340 60f0f52ef870880c1d8d4a88867fa946 1021 PANTHER PTHR11532:SF57 12 448 1.9E-200 T 22-04-2016 SRM_RS06445 aa4eb3841d73b9271c13af6fdba51a08 686 SUPERFAMILY SSF140990 468 657 1.83E-61 T 22-04-2016 SRM_RS06445 aa4eb3841d73b9271c13af6fdba51a08 686 TIGRFAM TIGR01241 FtsH_fam: ATP-dependent metallopeptidase HflB 167 652 2.7E-198 T 22-04-2016 IPR005936 Peptidase, FtsH GO:0004222|GO:0016020 SRM_RS06445 aa4eb3841d73b9271c13af6fdba51a08 686 PANTHER PTHR23076:SF10 32 107 2.4E-291 T 22-04-2016 SRM_RS06445 aa4eb3841d73b9271c13af6fdba51a08 686 PANTHER PTHR23076 127 678 2.4E-291 T 22-04-2016 SRM_RS06445 aa4eb3841d73b9271c13af6fdba51a08 686 PANTHER PTHR23076:SF10 127 678 2.4E-291 T 22-04-2016 SRM_RS06445 aa4eb3841d73b9271c13af6fdba51a08 686 PANTHER PTHR23076 32 107 2.4E-291 T 22-04-2016 SRM_RS06445 aa4eb3841d73b9271c13af6fdba51a08 686 ProSitePatterns PS00674 AAA-protein family signature. 356 374 - T 22-04-2016 IPR003960 ATPase, AAA-type, conserved site GO:0005524 SRM_RS06445 aa4eb3841d73b9271c13af6fdba51a08 686 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 253 384 1.9E-44 T 22-04-2016 IPR003959 ATPase, AAA-type, core GO:0005524 SRM_RS06445 aa4eb3841d73b9271c13af6fdba51a08 686 Gene3D G3DSA:3.40.50.300 212 394 4.1E-60 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SRM_RS06445 aa4eb3841d73b9271c13af6fdba51a08 686 SMART SM00382 249 388 9.2E-23 T 22-04-2016 IPR003593 AAA+ ATPase domain SRM_RS06445 aa4eb3841d73b9271c13af6fdba51a08 686 Pfam PF06480 FtsH Extracellular 38 154 1.4E-10 T 22-04-2016 IPR011546 Peptidase M41, FtsH extracellular GO:0004222|GO:0005524|GO:0008270|GO:0016021 SRM_RS06445 aa4eb3841d73b9271c13af6fdba51a08 686 SUPERFAMILY SSF52540 212 480 8.37E-69 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SRM_RS06445 aa4eb3841d73b9271c13af6fdba51a08 686 Hamap MF_01458 ATP-dependent zinc metalloprotease FtsH [ftsH]. 30 672 34.211 T 22-04-2016 IPR005936 Peptidase, FtsH GO:0004222|GO:0016020 SRM_RS06445 aa4eb3841d73b9271c13af6fdba51a08 686 Pfam PF01434 Peptidase family M41 447 649 7.1E-70 T 22-04-2016 IPR000642 Peptidase M41 GO:0004222|GO:0005524|GO:0006508 SRM_RS06445 aa4eb3841d73b9271c13af6fdba51a08 686 Gene3D G3DSA:1.10.8.60 395 461 4.4E-26 T 22-04-2016 SRM_RS04040 70dd3a2887452777e979246ae339fe21 197 TIGRFAM TIGR04178 exo_archaeo: exosortase/archaeosortase family protein 84 168 6.6E-18 T 22-04-2016 IPR026392 Exosortase/Archaeosortase domain SRM_RS04040 70dd3a2887452777e979246ae339fe21 197 Pfam PF09721 Transmembrane exosortase (Exosortase_EpsH) 26 168 1.2E-16 T 22-04-2016 IPR019127 Exosortase EpsH-related KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00550+3.4.-.-|KEGG: 00780+3.4.-.- SRM_RS01200 833781051592e45d98efd0384bf87707 712 Pfam PF00512 His Kinase A (phospho-acceptor) domain 471 537 9.3E-16 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SRM_RS01200 833781051592e45d98efd0384bf87707 712 SUPERFAMILY SSF55781 272 436 1.35E-11 T 22-04-2016 IPR029016 GAF domain-like SRM_RS01200 833781051592e45d98efd0384bf87707 712 Gene3D G3DSA:3.30.565.10 538 697 1.5E-43 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SRM_RS01200 833781051592e45d98efd0384bf87707 712 SUPERFAMILY SSF47384 458 539 1.96E-18 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SRM_RS01200 833781051592e45d98efd0384bf87707 712 Pfam PF13185 GAF domain 303 433 1.1E-6 T 22-04-2016 IPR003018 GAF domain GO:0005515 SRM_RS01200 833781051592e45d98efd0384bf87707 712 Gene3D G3DSA:1.10.287.130 462 533 3.9E-16 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SRM_RS01200 833781051592e45d98efd0384bf87707 712 SMART SM00388 470 537 2.0E-20 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SRM_RS01200 833781051592e45d98efd0384bf87707 712 PANTHER PTHR24423 435 699 3.4E-79 T 22-04-2016 SRM_RS01200 833781051592e45d98efd0384bf87707 712 PANTHER PTHR24423 84 102 3.4E-79 T 22-04-2016 SRM_RS01200 833781051592e45d98efd0384bf87707 712 Gene3D G3DSA:3.30.450.40 278 449 3.5E-10 T 22-04-2016 IPR029016 GAF domain-like SRM_RS01200 833781051592e45d98efd0384bf87707 712 SUPERFAMILY SSF55874 527 694 1.15E-41 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SRM_RS01200 833781051592e45d98efd0384bf87707 712 PRINTS PR00344 Bacterial sensor protein C-terminal signature 637 647 2.4E-14 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SRM_RS01200 833781051592e45d98efd0384bf87707 712 PRINTS PR00344 Bacterial sensor protein C-terminal signature 619 633 2.4E-14 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SRM_RS01200 833781051592e45d98efd0384bf87707 712 PRINTS PR00344 Bacterial sensor protein C-terminal signature 654 672 2.4E-14 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SRM_RS01200 833781051592e45d98efd0384bf87707 712 PRINTS PR00344 Bacterial sensor protein C-terminal signature 678 691 2.4E-14 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SRM_RS01200 833781051592e45d98efd0384bf87707 712 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 585 693 1.7E-23 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SRM_RS01200 833781051592e45d98efd0384bf87707 712 SMART SM00387 583 694 1.0E-32 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SRM_RS02110 bd3a396c8e22059a2e81695180cc0228 458 PANTHER PTHR11271:SF42 1 306 1.3E-16 T 22-04-2016 SRM_RS02110 bd3a396c8e22059a2e81695180cc0228 458 PANTHER PTHR11271:SF42 334 443 1.3E-16 T 22-04-2016 SRM_RS02110 bd3a396c8e22059a2e81695180cc0228 458 SUPERFAMILY SSF51556 87 289 1.41E-48 T 22-04-2016 IPR032466 Metal-dependent hydrolase SRM_RS02110 bd3a396c8e22059a2e81695180cc0228 458 SUPERFAMILY SSF51556 316 399 1.41E-48 T 22-04-2016 IPR032466 Metal-dependent hydrolase SRM_RS02110 bd3a396c8e22059a2e81695180cc0228 458 PANTHER PTHR11271 1 306 1.3E-16 T 22-04-2016 SRM_RS02110 bd3a396c8e22059a2e81695180cc0228 458 PANTHER PTHR11271 334 443 1.3E-16 T 22-04-2016 SRM_RS02110 bd3a396c8e22059a2e81695180cc0228 458 Pfam PF01979 Amidohydrolase family 84 439 6.9E-14 T 22-04-2016 IPR006680 Amidohydrolase-related GO:0016787 SRM_RS02110 bd3a396c8e22059a2e81695180cc0228 458 Gene3D G3DSA:2.30.40.10 33 89 2.8E-16 T 22-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 SRM_RS02110 bd3a396c8e22059a2e81695180cc0228 458 Gene3D G3DSA:2.30.40.10 402 441 2.8E-16 T 22-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 SRM_RS02110 bd3a396c8e22059a2e81695180cc0228 458 Gene3D G3DSA:3.20.20.140 322 398 1.6E-53 T 22-04-2016 SRM_RS02110 bd3a396c8e22059a2e81695180cc0228 458 Gene3D G3DSA:3.20.20.140 90 288 1.6E-53 T 22-04-2016 SRM_RS02110 bd3a396c8e22059a2e81695180cc0228 458 SUPERFAMILY SSF51338 35 89 6.15E-12 T 22-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 SRM_RS02110 bd3a396c8e22059a2e81695180cc0228 458 SUPERFAMILY SSF51338 410 442 6.15E-12 T 22-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 SRM_RS13195 96276c36f506a1ea81734c040d834ece 282 PANTHER PTHR10359 11 220 9.4E-77 T 22-04-2016 SRM_RS13195 96276c36f506a1ea81734c040d834ece 282 Hamap MF_00942 Endonuclease III [nth]. 1 212 37.596 T 22-04-2016 IPR005759 Endonuclease III GO:0003906|GO:0006284 SRM_RS13195 96276c36f506a1ea81734c040d834ece 282 SMART SM00525 189 209 0.0022 T 22-04-2016 IPR003651 Endonuclease III-like, iron-sulphur cluster loop motif GO:0051539 Reactome: REACT_216 SRM_RS13195 96276c36f506a1ea81734c040d834ece 282 Gene3D G3DSA:1.10.340.30 23 123 5.9E-35 T 22-04-2016 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: REACT_216 SRM_RS13195 96276c36f506a1ea81734c040d834ece 282 Pfam PF00633 Helix-hairpin-helix motif 101 127 1.6E-6 T 22-04-2016 IPR000445 Helix-hairpin-helix motif GO:0003677 SRM_RS13195 96276c36f506a1ea81734c040d834ece 282 SMART SM00478 39 188 6.8E-54 T 22-04-2016 IPR003265 HhH-GPD domain GO:0006284 Reactome: REACT_216 SRM_RS13195 96276c36f506a1ea81734c040d834ece 282 Gene3D G3DSA:1.10.1670.10 124 210 3.6E-35 T 22-04-2016 IPR023170 Helix-turn-helix, base-excision DNA repair, C-terminal SRM_RS13195 96276c36f506a1ea81734c040d834ece 282 SUPERFAMILY SSF48150 5 210 6.44E-69 T 22-04-2016 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: REACT_216 SRM_RS13195 96276c36f506a1ea81734c040d834ece 282 TIGRFAM TIGR01083 nth: endonuclease III 6 197 3.1E-71 T 22-04-2016 IPR005759 Endonuclease III GO:0003906|GO:0006284 SRM_RS13195 96276c36f506a1ea81734c040d834ece 282 Pfam PF00730 HhH-GPD superfamily base excision DNA repair protein 35 171 1.8E-24 T 22-04-2016 IPR003265 HhH-GPD domain GO:0006284 Reactome: REACT_216 SRM_RS02190 b4a3c9053e48c3d92ff0ec4322e89562 1002 TIGRFAM TIGR04056 OMP_RagA_SusC: TonB-linked outer membrane protein, SusC/RagA family 30 1001 2.8E-161 T 22-04-2016 IPR023996 TonB-dependent outer membrane protein, SusC/RagA UniPathway: UPA00153 SRM_RS02190 b4a3c9053e48c3d92ff0ec4322e89562 1002 SUPERFAMILY SSF49464 29 112 1.57E-17 T 22-04-2016 IPR008969 Carboxypeptidase-like, regulatory domain SRM_RS02190 b4a3c9053e48c3d92ff0ec4322e89562 1002 SUPERFAMILY SSF56935 451 792 8.42E-81 T 22-04-2016 SRM_RS02190 b4a3c9053e48c3d92ff0ec4322e89562 1002 SUPERFAMILY SSF56935 841 877 8.42E-81 T 22-04-2016 SRM_RS02190 b4a3c9053e48c3d92ff0ec4322e89562 1002 SUPERFAMILY SSF56935 329 417 8.42E-81 T 22-04-2016 SRM_RS02190 b4a3c9053e48c3d92ff0ec4322e89562 1002 SUPERFAMILY SSF56935 906 975 8.42E-81 T 22-04-2016 SRM_RS02190 b4a3c9053e48c3d92ff0ec4322e89562 1002 SUPERFAMILY SSF56935 110 279 8.42E-81 T 22-04-2016 SRM_RS02190 b4a3c9053e48c3d92ff0ec4322e89562 1002 Pfam PF07715 TonB-dependent Receptor Plug Domain 124 255 1.2E-19 T 22-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 SRM_RS02190 b4a3c9053e48c3d92ff0ec4322e89562 1002 Gene3D G3DSA:2.40.170.20 827 866 3.0E-29 T 22-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 SRM_RS02190 b4a3c9053e48c3d92ff0ec4322e89562 1002 Gene3D G3DSA:2.40.170.20 333 792 3.0E-29 T 22-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 SRM_RS02190 b4a3c9053e48c3d92ff0ec4322e89562 1002 Gene3D G3DSA:2.170.130.10 115 259 2.8E-22 T 22-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 SRM_RS02190 b4a3c9053e48c3d92ff0ec4322e89562 1002 Pfam PF13715 CarboxypepD_reg-like domain 31 114 1.1E-20 T 22-04-2016 SRM_RS02190 b4a3c9053e48c3d92ff0ec4322e89562 1002 PANTHER PTHR11532:SF57 418 473 3.5E-115 T 22-04-2016 SRM_RS02190 b4a3c9053e48c3d92ff0ec4322e89562 1002 PANTHER PTHR11532:SF57 528 1000 3.5E-115 T 22-04-2016 SRM_RS02190 b4a3c9053e48c3d92ff0ec4322e89562 1002 PANTHER PTHR11532:SF57 12 199 3.5E-115 T 22-04-2016 SRM_RS02190 b4a3c9053e48c3d92ff0ec4322e89562 1002 PANTHER PTHR11532:SF57 222 383 3.5E-115 T 22-04-2016 SRM_RS02190 b4a3c9053e48c3d92ff0ec4322e89562 1002 Gene3D G3DSA:2.60.40.1120 31 114 5.5E-15 T 22-04-2016 IPR014766 Carboxypeptidase, regulatory domain SRM_RS02190 b4a3c9053e48c3d92ff0ec4322e89562 1002 TIGRFAM TIGR04057 SusC_RagA_signa: TonB-dependent outer membrane receptor, SusC/RagA subfamily, signature region 231 261 3.4E-14 T 22-04-2016 IPR023997 TonB-dependent outer membrane protein SusC/RagA, conserved site UniPathway: UPA00153 SRM_RS02190 b4a3c9053e48c3d92ff0ec4322e89562 1002 PANTHER PTHR11532 418 473 3.5E-115 T 22-04-2016 SRM_RS02190 b4a3c9053e48c3d92ff0ec4322e89562 1002 PANTHER PTHR11532 528 1000 3.5E-115 T 22-04-2016 SRM_RS02190 b4a3c9053e48c3d92ff0ec4322e89562 1002 PANTHER PTHR11532 12 199 3.5E-115 T 22-04-2016 SRM_RS02190 b4a3c9053e48c3d92ff0ec4322e89562 1002 PANTHER PTHR11532 222 383 3.5E-115 T 22-04-2016 SRM_RS07430 bca3b91035bdf3e283c80e24fd8546a3 290 SUPERFAMILY SSF53613 3 263 9.98E-80 T 22-04-2016 IPR029056 Ribokinase-like SRM_RS07430 bca3b91035bdf3e283c80e24fd8546a3 290 Pfam PF08543 Phosphomethylpyrimidine kinase 14 259 7.0E-95 T 22-04-2016 IPR013749 Pyridoxamine kinase/Phosphomethylpyrimidine kinase UniPathway: UPA00647 SRM_RS07430 bca3b91035bdf3e283c80e24fd8546a3 290 PANTHER PTHR20858:SF17 1 264 2.9E-118 T 22-04-2016 SRM_RS07430 bca3b91035bdf3e283c80e24fd8546a3 290 TIGRFAM TIGR00097 HMP-P_kinase: hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase 7 261 2.0E-101 T 22-04-2016 IPR004399 Hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase GO:0008972|GO:0009228 KEGG: 00730+2.7.1.49|MetaCyc: PWY-6910|MetaCyc: PWY-7356|MetaCyc: PWY-7357 SRM_RS07430 bca3b91035bdf3e283c80e24fd8546a3 290 PANTHER PTHR20858 1 264 2.9E-118 T 22-04-2016 SRM_RS07430 bca3b91035bdf3e283c80e24fd8546a3 290 Gene3D G3DSA:3.40.1190.20 5 261 1.8E-101 T 22-04-2016 IPR029056 Ribokinase-like SRM_RS07320 869dcf5965ee97ec39940e31b3913142 131 PANTHER PTHR30007:SF18 6 114 7.7E-40 T 22-04-2016 SRM_RS07320 869dcf5965ee97ec39940e31b3913142 131 Pfam PF13340 Putative transposase of IS4/5 family (DUF4096) 9 80 1.2E-30 T 22-04-2016 IPR025161 Putative transposase IS4/IS5 family SRM_RS07320 869dcf5965ee97ec39940e31b3913142 131 PANTHER PTHR30007 6 114 7.7E-40 T 22-04-2016 SRM_RS15190 1a304bd01956715e8e29a9901ce48122 837 SUPERFAMILY SSF55486 303 523 2.0E-25 T 22-04-2016 SRM_RS15190 1a304bd01956715e8e29a9901ce48122 837 Gene3D G3DSA:3.40.390.10 269 527 3.1E-19 T 22-04-2016 IPR024079 Metallopeptidase, catalytic domain GO:0008237 SRM_RS15190 1a304bd01956715e8e29a9901ce48122 837 Pfam PF16313 Met-zincin 432 736 1.0E-113 T 22-04-2016 IPR032534 Domian of unknown function DUF4953 SRM_RS15190 1a304bd01956715e8e29a9901ce48122 837 Pfam PF17162 Domain of unknown function (DUF5118) 56 104 3.8E-16 T 22-04-2016 IPR033428 Domain of unknown function DUF5118 SRM_RS15190 1a304bd01956715e8e29a9901ce48122 837 Pfam PF17148 Domain of unknown function (DUF5117) 112 299 1.3E-61 T 22-04-2016 IPR033413 Domain of unknown function DUF5117 SRM_RS15190 1a304bd01956715e8e29a9901ce48122 837 PANTHER PTHR38478 5 831 1.9E-157 T 22-04-2016 SRM_RS01110 a0703bf2d7f174d3f49e456e2ab52e57 849 Pfam PF03176 MMPL family 556 838 1.2E-20 T 22-04-2016 IPR004869 Membrane transport protein, MMPL domain GO:0016020 SRM_RS01110 a0703bf2d7f174d3f49e456e2ab52e57 849 Pfam PF03176 MMPL family 303 454 5.9E-19 T 22-04-2016 IPR004869 Membrane transport protein, MMPL domain GO:0016020 SRM_RS01110 a0703bf2d7f174d3f49e456e2ab52e57 849 Gene3D G3DSA:1.20.1640.10 667 844 4.5E-26 T 22-04-2016 SRM_RS01110 a0703bf2d7f174d3f49e456e2ab52e57 849 Gene3D G3DSA:1.20.1640.10 225 443 2.4E-25 T 22-04-2016 SRM_RS01110 a0703bf2d7f174d3f49e456e2ab52e57 849 PANTHER PTHR33406 1 96 7.2E-44 T 22-04-2016 SRM_RS01110 a0703bf2d7f174d3f49e456e2ab52e57 849 PANTHER PTHR33406 150 287 7.2E-44 T 22-04-2016 SRM_RS01110 a0703bf2d7f174d3f49e456e2ab52e57 849 PANTHER PTHR33406 309 844 7.2E-44 T 22-04-2016 SRM_RS01110 a0703bf2d7f174d3f49e456e2ab52e57 849 SUPERFAMILY SSF82866 646 844 1.96E-31 T 22-04-2016 SRM_RS01110 a0703bf2d7f174d3f49e456e2ab52e57 849 PANTHER PTHR33406:SF2 1 96 7.2E-44 T 22-04-2016 SRM_RS01110 a0703bf2d7f174d3f49e456e2ab52e57 849 PANTHER PTHR33406:SF2 150 287 7.2E-44 T 22-04-2016 SRM_RS01110 a0703bf2d7f174d3f49e456e2ab52e57 849 PANTHER PTHR33406:SF2 309 844 7.2E-44 T 22-04-2016 SRM_RS01110 a0703bf2d7f174d3f49e456e2ab52e57 849 SUPERFAMILY SSF82866 228 443 7.06E-25 T 22-04-2016 SRM_RS09725 344f7ac9dd689f121ffeecf9d7a6de99 340 SMART SM00829 11 338 2.8E-27 T 22-04-2016 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 SRM_RS09725 344f7ac9dd689f121ffeecf9d7a6de99 340 PANTHER PTHR11695:SF419 16 340 7.4E-128 T 22-04-2016 SRM_RS09725 344f7ac9dd689f121ffeecf9d7a6de99 340 Gene3D G3DSA:3.90.180.10 1 167 2.7E-40 T 22-04-2016 IPR011032 GroES-like SRM_RS09725 344f7ac9dd689f121ffeecf9d7a6de99 340 SUPERFAMILY SSF50129 12 166 1.16E-38 T 22-04-2016 IPR011032 GroES-like SRM_RS09725 344f7ac9dd689f121ffeecf9d7a6de99 340 Pfam PF00107 Zinc-binding dehydrogenase 171 298 7.0E-26 T 22-04-2016 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 SRM_RS09725 344f7ac9dd689f121ffeecf9d7a6de99 340 SUPERFAMILY SSF51735 132 311 1.21E-42 T 22-04-2016 IPR016040 NAD(P)-binding domain SRM_RS09725 344f7ac9dd689f121ffeecf9d7a6de99 340 Gene3D G3DSA:3.40.50.720 168 282 2.9E-34 T 22-04-2016 IPR016040 NAD(P)-binding domain SRM_RS09725 344f7ac9dd689f121ffeecf9d7a6de99 340 PANTHER PTHR11695 16 340 7.4E-128 T 22-04-2016 IPR002085 Alcohol dehydrogenase superfamily, zinc-type GO:0008270|GO:0016491|GO:0055114 SRM_RS09725 344f7ac9dd689f121ffeecf9d7a6de99 340 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 28 91 2.0E-9 T 22-04-2016 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 SRM_RS11500 7e6826ce4ba6a5fae37e101939899441 352 Gene3D G3DSA:3.20.20.70 9 338 6.7E-91 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 SRM_RS11500 7e6826ce4ba6a5fae37e101939899441 352 Pfam PF01791 DeoC/LacD family aldolase 26 294 4.7E-45 T 22-04-2016 IPR002915 DeoC/FbaB/ lacD aldolase GO:0016829 SRM_RS11500 7e6826ce4ba6a5fae37e101939899441 352 Hamap MF_00734 Tagatose 1,6-diphosphate aldolase [lacD]. 1 352 109.395 T 22-04-2016 IPR005927 Tagatose 1,6-diphosphate aldolase GO:0009024|GO:0019512 KEGG: 00052+4.1.2.40|MetaCyc: PWY-7077|MetaCyc: PWY-7395|UniPathway: UPA00704 SRM_RS11500 7e6826ce4ba6a5fae37e101939899441 352 PANTHER PTHR39340 3 350 2.6E-78 T 22-04-2016 SRM_RS11500 7e6826ce4ba6a5fae37e101939899441 352 PANTHER PTHR39340:SF1 3 350 2.6E-78 T 22-04-2016 SRM_RS11500 7e6826ce4ba6a5fae37e101939899441 352 SMART SM01133 25 295 2.0E-22 T 22-04-2016 IPR002915 DeoC/FbaB/ lacD aldolase GO:0016829 SRM_RS11500 7e6826ce4ba6a5fae37e101939899441 352 SUPERFAMILY SSF51569 10 321 1.35E-52 T 22-04-2016 SRM_RS11095 be872c20080a30be592725bcbd82d82c 224 Hamap MF_00494 Probable transaldolase [tal]. 1 215 45.105 T 22-04-2016 IPR022999 Transaldolase type 3B, putative GO:0004801 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|UniPathway: UPA00115 SRM_RS11095 be872c20080a30be592725bcbd82d82c 224 SUPERFAMILY SSF51569 1 213 2.72E-74 T 22-04-2016 SRM_RS11095 be872c20080a30be592725bcbd82d82c 224 ProSitePatterns PS01054 Transaldolase signature 1. 24 32 - T 22-04-2016 IPR018225 Transaldolase, active site GO:0005975 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|UniPathway: UPA00115 SRM_RS11095 be872c20080a30be592725bcbd82d82c 224 TIGRFAM TIGR00875 fsa_talC_mipB: fructose-6-phosphate aldolase 1 213 1.1E-88 T 22-04-2016 IPR004731 Transaldolase type 3B/Fructose-6-phosphate aldolase GO:0005975 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|UniPathway: UPA00115 SRM_RS11095 be872c20080a30be592725bcbd82d82c 224 Pfam PF00923 Transaldolase 3 205 1.3E-60 T 22-04-2016 IPR001585 Transaldolase/Fructose-6-phosphate aldolase GO:0005975 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|UniPathway: UPA00115 SRM_RS11095 be872c20080a30be592725bcbd82d82c 224 PANTHER PTHR10683 1 213 2.5E-77 T 22-04-2016 IPR001585 Transaldolase/Fructose-6-phosphate aldolase GO:0005975 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|UniPathway: UPA00115 SRM_RS11095 be872c20080a30be592725bcbd82d82c 224 Gene3D G3DSA:3.20.20.70 1 214 1.2E-72 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 SRM_RS07935 f58c5b071166d4700e9b754578a9fdcf 310 SUPERFAMILY SSF53300 82 251 1.32E-17 T 22-04-2016 IPR002035 von Willebrand factor, type A SRM_RS07935 f58c5b071166d4700e9b754578a9fdcf 310 SMART SM00327 83 258 3.8E-5 T 22-04-2016 IPR002035 von Willebrand factor, type A SRM_RS07935 f58c5b071166d4700e9b754578a9fdcf 310 PANTHER PTHR33608 11 308 2.3E-93 T 22-04-2016 SRM_RS07935 f58c5b071166d4700e9b754578a9fdcf 310 PANTHER PTHR33608:SF2 11 308 2.3E-93 T 22-04-2016 SRM_RS07935 f58c5b071166d4700e9b754578a9fdcf 310 Gene3D G3DSA:3.40.50.410 90 227 5.0E-7 T 22-04-2016 IPR002035 von Willebrand factor, type A SRM_RS07935 f58c5b071166d4700e9b754578a9fdcf 310 Pfam PF01882 Protein of unknown function DUF58 47 132 2.5E-19 T 22-04-2016 IPR002881 Domain of unknown function DUF58 SRM_RS03105 df14740499adf4df0b484ce4bfa5d415 943 SUPERFAMILY SSF56935 126 270 1.21E-78 T 22-04-2016 SRM_RS03105 df14740499adf4df0b484ce4bfa5d415 943 SUPERFAMILY SSF56935 326 943 1.21E-78 T 22-04-2016 SRM_RS03105 df14740499adf4df0b484ce4bfa5d415 943 Gene3D G3DSA:2.40.170.20 249 256 8.4E-60 T 22-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 SRM_RS03105 df14740499adf4df0b484ce4bfa5d415 943 Gene3D G3DSA:2.40.170.20 326 943 8.4E-60 T 22-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 SRM_RS03105 df14740499adf4df0b484ce4bfa5d415 943 SUPERFAMILY SSF49464 39 128 3.73E-23 T 22-04-2016 IPR008969 Carboxypeptidase-like, regulatory domain SRM_RS03105 df14740499adf4df0b484ce4bfa5d415 943 Gene3D G3DSA:2.170.130.10 131 248 1.8E-9 T 22-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 SRM_RS03105 df14740499adf4df0b484ce4bfa5d415 943 PANTHER PTHR30069 2 271 1.3E-34 T 22-04-2016 SRM_RS03105 df14740499adf4df0b484ce4bfa5d415 943 Pfam PF07715 TonB-dependent Receptor Plug Domain 148 230 3.5E-7 T 22-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 SRM_RS03105 df14740499adf4df0b484ce4bfa5d415 943 Pfam PF13715 CarboxypepD_reg-like domain 42 130 2.5E-24 T 22-04-2016 SRM_RS03105 df14740499adf4df0b484ce4bfa5d415 943 Gene3D G3DSA:2.60.40.1120 42 130 8.6E-22 T 22-04-2016 IPR014766 Carboxypeptidase, regulatory domain SRM_RS03105 df14740499adf4df0b484ce4bfa5d415 943 Pfam PF14905 Outer membrane protein beta-barrel family 605 941 2.6E-26 T 22-04-2016 SRM_RS02755 9415a307620b04258849fde9ce4858d5 885 Gene3D G3DSA:2.60.40.290 36 156 1.0E-27 T 22-04-2016 IPR012291 Cellulose-binding family II/chitobiase, carbohydrate-binding domain GO:0004553|GO:0030247 SRM_RS02755 9415a307620b04258849fde9ce4858d5 885 Pfam PF03173 Putative carbohydrate binding domain 58 157 5.0E-10 T 22-04-2016 IPR004866 Chitobiase/beta-hexosaminidases, N-terminal domain KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|UniPathway: UPA00349 SRM_RS02755 9415a307620b04258849fde9ce4858d5 885 PANTHER PTHR22600 490 695 2.7E-157 T 22-04-2016 SRM_RS02755 9415a307620b04258849fde9ce4858d5 885 PANTHER PTHR22600 431 472 2.7E-157 T 22-04-2016 SRM_RS02755 9415a307620b04258849fde9ce4858d5 885 Gene3D G3DSA:2.60.40.320 829 881 5.5E-20 T 22-04-2016 IPR013812 Glycoside hydrolase, family 2/20, immunoglobulin-like beta-sandwich domain GO:0004553|GO:0005975 SRM_RS02755 9415a307620b04258849fde9ce4858d5 885 PANTHER PTHR22600:SF12 211 405 2.7E-157 T 22-04-2016 SRM_RS02755 9415a307620b04258849fde9ce4858d5 885 PANTHER PTHR22600:SF12 490 695 2.7E-157 T 22-04-2016 SRM_RS02755 9415a307620b04258849fde9ce4858d5 885 PANTHER PTHR22600:SF12 716 842 2.7E-157 T 22-04-2016 SRM_RS02755 9415a307620b04258849fde9ce4858d5 885 PANTHER PTHR22600:SF12 431 472 2.7E-157 T 22-04-2016 SRM_RS02755 9415a307620b04258849fde9ce4858d5 885 Gene3D G3DSA:3.20.20.80 343 828 2.3E-131 T 22-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 SRM_RS02755 9415a307620b04258849fde9ce4858d5 885 SUPERFAMILY SSF51445 345 773 8.42E-120 T 22-04-2016 IPR017853 Glycoside hydrolase superfamily SRM_RS02755 9415a307620b04258849fde9ce4858d5 885 PRINTS PR00738 Glycosyl hydrolase family 20 signature 514 532 8.4E-43 T 22-04-2016 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902 SRM_RS02755 9415a307620b04258849fde9ce4858d5 885 PRINTS PR00738 Glycosyl hydrolase family 20 signature 368 389 8.4E-43 T 22-04-2016 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902 SRM_RS02755 9415a307620b04258849fde9ce4858d5 885 PRINTS PR00738 Glycosyl hydrolase family 20 signature 541 554 8.4E-43 T 22-04-2016 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902 SRM_RS02755 9415a307620b04258849fde9ce4858d5 885 PRINTS PR00738 Glycosyl hydrolase family 20 signature 748 765 8.4E-43 T 22-04-2016 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902 SRM_RS02755 9415a307620b04258849fde9ce4858d5 885 PRINTS PR00738 Glycosyl hydrolase family 20 signature 730 746 8.4E-43 T 22-04-2016 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902 SRM_RS02755 9415a307620b04258849fde9ce4858d5 885 PRINTS PR00738 Glycosyl hydrolase family 20 signature 299 319 8.4E-43 T 22-04-2016 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902 SRM_RS02755 9415a307620b04258849fde9ce4858d5 885 PRINTS PR00738 Glycosyl hydrolase family 20 signature 339 356 8.4E-43 T 22-04-2016 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902 SRM_RS02755 9415a307620b04258849fde9ce4858d5 885 PRINTS PR00738 Glycosyl hydrolase family 20 signature 448 465 8.4E-43 T 22-04-2016 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902 SRM_RS02755 9415a307620b04258849fde9ce4858d5 885 PANTHER PTHR22600 211 405 2.7E-157 T 22-04-2016 SRM_RS02755 9415a307620b04258849fde9ce4858d5 885 PANTHER PTHR22600 716 842 2.7E-157 T 22-04-2016 SRM_RS02755 9415a307620b04258849fde9ce4858d5 885 Pfam PF03174 Chitobiase/beta-hexosaminidase C-terminal domain 798 878 1.1E-21 T 22-04-2016 SRM_RS02755 9415a307620b04258849fde9ce4858d5 885 SUPERFAMILY SSF81296 780 880 1.06E-15 T 22-04-2016 IPR014756 Immunoglobulin E-set SRM_RS02755 9415a307620b04258849fde9ce4858d5 885 Pfam PF00728 Glycosyl hydrolase family 20, catalytic domain 345 765 8.1E-94 T 22-04-2016 IPR015883 Glycoside hydrolase family 20, catalytic domain GO:0004553|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902 SRM_RS02755 9415a307620b04258849fde9ce4858d5 885 SUPERFAMILY SSF49384 38 194 3.56E-22 T 22-04-2016 IPR008965 Carbohydrate-binding domain GO:0030246 SRM_RS02755 9415a307620b04258849fde9ce4858d5 885 SUPERFAMILY SSF55545 199 344 1.7E-19 T 22-04-2016 IPR029018 Chitobiase/beta-hexosaminidase domain 2-like SRM_RS02755 9415a307620b04258849fde9ce4858d5 885 Pfam PF02838 Glycosyl hydrolase family 20, domain 2 210 341 2.6E-22 T 22-04-2016 IPR015882 Beta-hexosaminidase, bacteial type, N-terminal KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902 SRM_RS02755 9415a307620b04258849fde9ce4858d5 885 Gene3D G3DSA:3.30.379.10 211 342 8.8E-28 T 22-04-2016 IPR029018 Chitobiase/beta-hexosaminidase domain 2-like SRM_RS02755 9415a307620b04258849fde9ce4858d5 885 SMART SM01081 42 192 2.4E-57 T 22-04-2016 IPR004866 Chitobiase/beta-hexosaminidases, N-terminal domain KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|UniPathway: UPA00349 SRM_RS10310 29f31702119a1c48d00418891d812998 717 PANTHER PTHR23408 23 686 0.0 T 22-04-2016 SRM_RS10310 29f31702119a1c48d00418891d812998 717 TIGRFAM TIGR00640 acid_CoA_mut_C: methylmalonyl-CoA mutase C-terminal domain 579 705 4.1E-62 T 22-04-2016 IPR006159 Methylmalonyl-CoA mutase, C-terminal GO:0016853 SRM_RS10310 29f31702119a1c48d00418891d812998 717 SUPERFAMILY SSF51703 17 542 5.89E-214 T 22-04-2016 IPR016176 Cobalamin (vitamin B12)-dependent enzyme, catalytic GO:0003824|GO:0008152|GO:0031419 SRM_RS10310 29f31702119a1c48d00418891d812998 717 Gene3D G3DSA:3.40.50.280 547 705 7.2E-70 T 22-04-2016 IPR006158 Cobalamin (vitamin B12)-binding domain GO:0031419|GO:0046872 SRM_RS10310 29f31702119a1c48d00418891d812998 717 SUPERFAMILY SSF52242 546 710 4.06E-59 T 22-04-2016 IPR006158 Cobalamin (vitamin B12)-binding domain GO:0031419|GO:0046872 SRM_RS10310 29f31702119a1c48d00418891d812998 717 TIGRFAM TIGR00641 acid_CoA_mut_N: methylmalonyl-CoA mutase N-terminal domain 26 547 1.3E-259 T 22-04-2016 IPR006098 Methylmalonyl-CoA mutase, alpha chain, catalytic GO:0004494|GO:0008152|GO:0031419 SRM_RS10310 29f31702119a1c48d00418891d812998 717 Pfam PF02310 B12 binding domain 582 697 1.5E-17 T 22-04-2016 IPR006158 Cobalamin (vitamin B12)-binding domain GO:0031419|GO:0046872 SRM_RS10310 29f31702119a1c48d00418891d812998 717 Pfam PF01642 Methylmalonyl-CoA mutase 28 540 6.1E-230 T 22-04-2016 IPR006099 Methylmalonyl-CoA mutase, alpha/beta chain, catalytic GO:0008152|GO:0016866|GO:0031419 SRM_RS10310 29f31702119a1c48d00418891d812998 717 PANTHER PTHR23408:SF1 23 686 0.0 T 22-04-2016 SRM_RS10310 29f31702119a1c48d00418891d812998 717 Gene3D G3DSA:3.20.20.240 26 542 1.3E-242 T 22-04-2016 IPR014348 Cobalamin (vitamin B12)-dependent enzyme, catalytic subdomain GO:0008152|GO:0016866|GO:0031419 SRM_RS12910 52fe1df1b6b7ca896ccaaaffc05b35c6 245 TIGRFAM TIGR02135 phoU_full: phosphate transport system regulatory protein PhoU 6 214 1.3E-55 T 22-04-2016 IPR028366 Phosphate transport system protein PhoU GO:0005737|GO:0030643|GO:0045936 SRM_RS12910 52fe1df1b6b7ca896ccaaaffc05b35c6 245 Gene3D G3DSA:1.20.58.220 4 111 1.1E-31 T 22-04-2016 SRM_RS12910 52fe1df1b6b7ca896ccaaaffc05b35c6 245 PANTHER PTHR10010:SF14 4 223 7.1E-51 T 22-04-2016 IPR028366 Phosphate transport system protein PhoU GO:0005737|GO:0030643|GO:0045936 SRM_RS12910 52fe1df1b6b7ca896ccaaaffc05b35c6 245 Pfam PF01895 PhoU domain 18 105 6.2E-22 T 22-04-2016 IPR026022 PhoU domain SRM_RS12910 52fe1df1b6b7ca896ccaaaffc05b35c6 245 Pfam PF01895 PhoU domain 122 205 4.6E-17 T 22-04-2016 IPR026022 PhoU domain SRM_RS12910 52fe1df1b6b7ca896ccaaaffc05b35c6 245 PIRSF PIRSF003107 1 220 4.9E-57 T 22-04-2016 IPR028366 Phosphate transport system protein PhoU GO:0005737|GO:0030643|GO:0045936 SRM_RS12910 52fe1df1b6b7ca896ccaaaffc05b35c6 245 Gene3D G3DSA:1.20.58.220 119 221 8.0E-25 T 22-04-2016 SRM_RS12910 52fe1df1b6b7ca896ccaaaffc05b35c6 245 PANTHER PTHR10010 4 223 7.1E-51 T 22-04-2016 SRM_RS12910 52fe1df1b6b7ca896ccaaaffc05b35c6 245 SUPERFAMILY SSF109755 4 223 3.14E-61 T 22-04-2016 SRM_RS05910 9f8fd819b34869d966c163e0a1a6cc39 400 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 67 374 6.1E-60 T 22-04-2016 IPR006143 RND efflux pump, membrane fusion protein GO:0016020|GO:0055085 SRM_RS05910 9f8fd819b34869d966c163e0a1a6cc39 400 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 80 288 3.6E-23 T 22-04-2016 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain SRM_RS05910 9f8fd819b34869d966c163e0a1a6cc39 400 SUPERFAMILY SSF111369 80 295 1.7E-27 T 22-04-2016 SRM_RS05910 9f8fd819b34869d966c163e0a1a6cc39 400 PANTHER PTHR30469 17 385 4.8E-67 T 22-04-2016 SRM_RS05910 9f8fd819b34869d966c163e0a1a6cc39 400 Gene3D G3DSA:2.40.50.100 92 123 2.4E-6 T 22-04-2016 SRM_RS05910 9f8fd819b34869d966c163e0a1a6cc39 400 Gene3D G3DSA:2.40.50.100 184 217 2.4E-6 T 22-04-2016 SRM_RS09565 e5351e58c7dc97fad4d7cf177956cfe1 538 PANTHER PTHR19446:SF383 53 350 2.0E-68 T 22-04-2016 SRM_RS09565 e5351e58c7dc97fad4d7cf177956cfe1 538 SUPERFAMILY SSF56672 18 334 6.35E-50 T 22-04-2016 SRM_RS09565 e5351e58c7dc97fad4d7cf177956cfe1 538 PANTHER PTHR19446 53 350 2.0E-68 T 22-04-2016 SRM_RS09565 e5351e58c7dc97fad4d7cf177956cfe1 538 Pfam PF08388 Group II intron, maturase-specific domain 352 411 9.3E-14 T 22-04-2016 IPR013597 Group II intron, maturase-specific SRM_RS09565 e5351e58c7dc97fad4d7cf177956cfe1 538 Pfam PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) 95 318 2.9E-44 T 22-04-2016 IPR000477 Reverse transcriptase domain SRM_RS09565 e5351e58c7dc97fad4d7cf177956cfe1 538 TIGRFAM TIGR04416 group_II_RT_mat: group II intron reverse transcriptase/maturase 34 405 1.6E-106 T 22-04-2016 IPR030931 Group II intron reverse transcriptase/maturase SRM_RS12800 e6b93326389f14dbcbc2597c417978ad 711 Gene3D G3DSA:3.30.70.1450 644 701 1.1E-9 T 22-04-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 SRM_RS12800 e6b93326389f14dbcbc2597c417978ad 711 Pfam PF00324 Amino acid permease 17 415 1.5E-43 T 22-04-2016 IPR004841 Amino acid permease/ SLC12A domain GO:0006810|GO:0016020|GO:0055085 SRM_RS12800 e6b93326389f14dbcbc2597c417978ad 711 SUPERFAMILY SSF55804 483 625 1.05E-11 T 22-04-2016 IPR016152 Phosphotransferase/anion transporter GO:0005215|GO:0006810 Reactome: REACT_15518 SRM_RS12800 e6b93326389f14dbcbc2597c417978ad 711 Pfam PF02080 TrkA-C domain 644 700 3.1E-16 T 22-04-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 SRM_RS12800 e6b93326389f14dbcbc2597c417978ad 711 Pfam PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 495 626 6.0E-11 T 22-04-2016 IPR002178 PTS EIIA type-2 domain KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- SRM_RS12800 e6b93326389f14dbcbc2597c417978ad 711 Gene3D G3DSA:3.40.930.10 483 628 1.0E-18 T 22-04-2016 IPR002178 PTS EIIA type-2 domain KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- SRM_RS12800 e6b93326389f14dbcbc2597c417978ad 711 SUPERFAMILY SSF116726 642 701 1.83E-12 T 22-04-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 SRM_RS12800 e6b93326389f14dbcbc2597c417978ad 711 ProSitePatterns PS00218 Amino acid permeases signature. 41 71 - T 22-04-2016 IPR004840 Amino acid permease, conserved site GO:0006865|GO:0016021|GO:0055085 SRM_RS12800 e6b93326389f14dbcbc2597c417978ad 711 PANTHER PTHR11785 6 165 1.4E-81 T 22-04-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 SRM_RS12800 e6b93326389f14dbcbc2597c417978ad 711 PANTHER PTHR11785 183 468 1.4E-81 T 22-04-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 SRM_RS05885 629291b4876123e8a779d90fc8d1d1ef 356 Gene3D G3DSA:3.20.20.210 2 351 7.6E-67 T 22-04-2016 SRM_RS05885 629291b4876123e8a779d90fc8d1d1ef 356 Pfam PF01717 Cobalamin-independent synthase, Catalytic domain 3 321 2.5E-15 T 22-04-2016 IPR002629 Cobalamin-independent methionine synthase MetE, C-terminal/archaeal GO:0003871|GO:0008270|GO:0009086 KEGG: 00270+2.1.1.14|KEGG: 00450+2.1.1.14|MetaCyc: PWY-5041|MetaCyc: PWY-6151|MetaCyc: PWY-6936|MetaCyc: PWY-702|UniPathway: UPA00051 SRM_RS05885 629291b4876123e8a779d90fc8d1d1ef 356 SUPERFAMILY SSF51726 3 349 6.02E-53 T 22-04-2016 SRM_RS05885 629291b4876123e8a779d90fc8d1d1ef 356 PANTHER PTHR30519 1 356 3.8E-114 T 22-04-2016 SRM_RS05885 629291b4876123e8a779d90fc8d1d1ef 356 PANTHER PTHR30519:SF10 1 356 3.8E-114 T 22-04-2016 SRM_RS04295 fde917a38424b32848851e735163ae42 371 Pfam PF01609 Transposase DDE domain 253 304 1.7E-7 T 22-04-2016 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 SRM_RS04295 fde917a38424b32848851e735163ae42 371 Gene3D G3DSA:3.90.350.10 256 287 2.5E-6 T 22-04-2016 IPR014736 Transposase, Tn5-like, core SRM_RS04295 fde917a38424b32848851e735163ae42 371 SUPERFAMILY SSF53098 28 353 3.79E-29 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 SRM_RS07390 fde917a38424b32848851e735163ae42 371 Pfam PF01609 Transposase DDE domain 253 304 1.7E-7 T 22-04-2016 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 SRM_RS07390 fde917a38424b32848851e735163ae42 371 Gene3D G3DSA:3.90.350.10 256 287 2.5E-6 T 22-04-2016 IPR014736 Transposase, Tn5-like, core SRM_RS07390 fde917a38424b32848851e735163ae42 371 SUPERFAMILY SSF53098 28 353 3.79E-29 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 SRM_RS09630 4094c7c41f2b7e61fe27336401f9c234 270 ProSitePatterns PS00614 Indole-3-glycerol phosphate synthase signature. 52 70 - T 22-04-2016 IPR001468 Indole-3-glycerol phosphate synthase, conserved site GO:0004425|GO:0006568 KEGG: 00400+4.1.1.48|UniPathway: UPA00035 SRM_RS09630 4094c7c41f2b7e61fe27336401f9c234 270 Gene3D G3DSA:3.20.20.70 2 262 3.1E-91 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 SRM_RS09630 4094c7c41f2b7e61fe27336401f9c234 270 PANTHER PTHR22854 2 268 6.2E-91 T 22-04-2016 SRM_RS09630 4094c7c41f2b7e61fe27336401f9c234 270 Hamap MF_00134_B Indole-3-glycerol phosphate synthase [trpC]. 2 259 32.288 T 22-04-2016 IPR013798 Indole-3-glycerol phosphate synthase GO:0004425 KEGG: 00400+4.1.1.48|UniPathway: UPA00035 SRM_RS09630 4094c7c41f2b7e61fe27336401f9c234 270 Pfam PF00218 Indole-3-glycerol phosphate synthase 4 256 4.0E-79 T 22-04-2016 IPR013798 Indole-3-glycerol phosphate synthase GO:0004425 KEGG: 00400+4.1.1.48|UniPathway: UPA00035 SRM_RS09630 4094c7c41f2b7e61fe27336401f9c234 270 SUPERFAMILY SSF51366 11 258 8.38E-76 T 22-04-2016 IPR011060 Ribulose-phosphate binding barrel GO:0003824|GO:0008152 SRM_RS09630 4094c7c41f2b7e61fe27336401f9c234 270 PANTHER PTHR22854:SF2 2 268 6.2E-91 T 22-04-2016 SRM_RS14855 1c499bf2fe5d4d8010fefe248f0613d0 172 Pfam PF07879 PHB/PHA accumulation regulator DNA-binding domain 5 63 1.2E-27 T 22-04-2016 IPR012909 PHA accumulation regulator DNA-binding, N-terminal SRM_RS08905 274695dece3b37075d1d79b1a77a5a95 251 SUPERFAMILY SSF48317 64 225 2.62E-31 T 22-04-2016 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase SRM_RS08905 274695dece3b37075d1d79b1a77a5a95 251 Pfam PF01569 PAP2 superfamily 109 225 1.5E-21 T 22-04-2016 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase SRM_RS08905 274695dece3b37075d1d79b1a77a5a95 251 Gene3D G3DSA:1.20.144.10 80 226 8.8E-29 T 22-04-2016 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase SRM_RS08905 274695dece3b37075d1d79b1a77a5a95 251 SMART SM00014 106 222 2.5E-20 T 22-04-2016 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase SRM_RS08905 274695dece3b37075d1d79b1a77a5a95 251 PANTHER PTHR14969 103 234 1.7E-20 T 22-04-2016 SRM_RS07775 a3ac8854b3f32bf810bd397b3af6c6a8 141 SUPERFAMILY SSF82784 3 135 2.09E-36 T 22-04-2016 IPR003718 OsmC/Ohr family SRM_RS07775 a3ac8854b3f32bf810bd397b3af6c6a8 141 TIGRFAM TIGR03562 osmo_induc_OsmC: peroxiredoxin, OsmC subfamily 3 138 4.9E-58 T 22-04-2016 IPR019904 Peroxiredoxin OsmC GO:0004601|GO:0006979 KEGG: 00480+1.11.1.15 SRM_RS07775 a3ac8854b3f32bf810bd397b3af6c6a8 141 PANTHER PTHR33797:SF1 3 140 2.2E-49 T 22-04-2016 SRM_RS07775 a3ac8854b3f32bf810bd397b3af6c6a8 141 Pfam PF02566 OsmC-like protein 40 136 3.1E-18 T 22-04-2016 IPR003718 OsmC/Ohr family SRM_RS07775 a3ac8854b3f32bf810bd397b3af6c6a8 141 PANTHER PTHR33797 3 140 2.2E-49 T 22-04-2016 SRM_RS07775 a3ac8854b3f32bf810bd397b3af6c6a8 141 Gene3D G3DSA:3.30.300.20 3 140 1.7E-50 T 22-04-2016 IPR015946 K homology domain-like, alpha/beta SRM_RS04565 5a41cfa732e58833523773eeb0fc196e 288 SUPERFAMILY SSF52210 123 282 2.75E-52 T 22-04-2016 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|UniPathway: UPA00223 SRM_RS04565 5a41cfa732e58833523773eeb0fc196e 288 Pfam PF02629 CoA binding domain 7 99 1.9E-29 T 22-04-2016 IPR003781 CoA-binding GO:0048037 SRM_RS04565 5a41cfa732e58833523773eeb0fc196e 288 ProSitePatterns PS00399 ATP-citrate lyase / succinyl-CoA ligases family active site. 236 249 - T 22-04-2016 IPR017440 ATP-citrate lyase/succinyl-CoA ligase, active site SRM_RS04565 5a41cfa732e58833523773eeb0fc196e 288 PRINTS PR01798 Succinyl-CoA synthase signature 208 221 1.0E-35 T 22-04-2016 IPR005810 Succinyl-CoA ligase, alpha subunit GO:0003824|GO:0008152 SRM_RS04565 5a41cfa732e58833523773eeb0fc196e 288 PRINTS PR01798 Succinyl-CoA synthase signature 240 257 1.0E-35 T 22-04-2016 IPR005810 Succinyl-CoA ligase, alpha subunit GO:0003824|GO:0008152 SRM_RS04565 5a41cfa732e58833523773eeb0fc196e 288 PRINTS PR01798 Succinyl-CoA synthase signature 82 99 1.0E-35 T 22-04-2016 IPR005810 Succinyl-CoA ligase, alpha subunit GO:0003824|GO:0008152 SRM_RS04565 5a41cfa732e58833523773eeb0fc196e 288 PRINTS PR01798 Succinyl-CoA synthase signature 177 195 1.0E-35 T 22-04-2016 IPR005810 Succinyl-CoA ligase, alpha subunit GO:0003824|GO:0008152 SRM_RS04565 5a41cfa732e58833523773eeb0fc196e 288 SUPERFAMILY SSF51735 1 122 2.96E-43 T 22-04-2016 IPR016040 NAD(P)-binding domain SRM_RS04565 5a41cfa732e58833523773eeb0fc196e 288 Gene3D G3DSA:3.40.50.261 120 287 6.3E-72 T 22-04-2016 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|UniPathway: UPA00223 SRM_RS04565 5a41cfa732e58833523773eeb0fc196e 288 ProSitePatterns PS01216 ATP-citrate lyase / succinyl-CoA ligases family signature 1. 152 181 - T 22-04-2016 IPR005810 Succinyl-CoA ligase, alpha subunit GO:0003824|GO:0008152 SRM_RS04565 5a41cfa732e58833523773eeb0fc196e 288 Gene3D G3DSA:3.40.50.720 2 119 2.3E-53 T 22-04-2016 IPR016040 NAD(P)-binding domain SRM_RS04565 5a41cfa732e58833523773eeb0fc196e 288 SMART SM00881 4 100 8.2E-37 T 22-04-2016 IPR003781 CoA-binding GO:0048037 SRM_RS04565 5a41cfa732e58833523773eeb0fc196e 288 PIRSF PIRSF001553 1 288 7.8E-130 T 22-04-2016 IPR005810 Succinyl-CoA ligase, alpha subunit GO:0003824|GO:0008152 SRM_RS04565 5a41cfa732e58833523773eeb0fc196e 288 Pfam PF00549 CoA-ligase 151 271 3.1E-18 T 22-04-2016 IPR005811 ATP-citrate lyase/succinyl-CoA ligase GO:0003824|GO:0008152 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|UniPathway: UPA00223 SRM_RS04565 5a41cfa732e58833523773eeb0fc196e 288 TIGRFAM TIGR01019 sucCoAalpha: succinate-CoA ligase, alpha subunit 3 288 4.6E-135 T 22-04-2016 IPR005810 Succinyl-CoA ligase, alpha subunit GO:0003824|GO:0008152 SRM_RS04565 5a41cfa732e58833523773eeb0fc196e 288 PANTHER PTHR11117 1 288 1.4E-170 T 22-04-2016 SRM_RS06925 f6958ef8df04bd5ae4f08b3d7d265402 275 Gene3D G3DSA:3.40.50.300 1 113 2.2E-18 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SRM_RS06925 f6958ef8df04bd5ae4f08b3d7d265402 275 Pfam PF05491 Holliday junction DNA helicase ruvB C-terminus 188 261 4.2E-31 T 22-04-2016 IPR008823 DNA helicase, Holliday junction RuvB type, C-terminal GO:0003677|GO:0006281|GO:0006310|GO:0009378 SRM_RS06925 f6958ef8df04bd5ae4f08b3d7d265402 275 PANTHER PTHR13779:SF25 1 265 2.7E-130 T 22-04-2016 SRM_RS06925 f6958ef8df04bd5ae4f08b3d7d265402 275 Hamap MF_00016 Holliday junction ATP-dependent DNA helicase RuvB [ruvB]. 1 275 134.148 T 22-04-2016 IPR004605 DNA helicase, Holliday junction RuvB type GO:0003677|GO:0005524|GO:0006281|GO:0006310|GO:0009378 SRM_RS06925 f6958ef8df04bd5ae4f08b3d7d265402 275 PANTHER PTHR13779 1 265 2.7E-130 T 22-04-2016 SRM_RS06925 f6958ef8df04bd5ae4f08b3d7d265402 275 SUPERFAMILY SSF52540 1 185 5.41E-36 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SRM_RS06925 f6958ef8df04bd5ae4f08b3d7d265402 275 SUPERFAMILY SSF46785 192 265 1.07E-21 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SRM_RS06925 f6958ef8df04bd5ae4f08b3d7d265402 275 TIGRFAM TIGR00635 ruvB: Holliday junction DNA helicase RuvB 1 261 5.7E-115 T 22-04-2016 IPR004605 DNA helicase, Holliday junction RuvB type GO:0003677|GO:0005524|GO:0006281|GO:0006310|GO:0009378 SRM_RS06925 f6958ef8df04bd5ae4f08b3d7d265402 275 ProDom PD005323 DNA HELICASE HOLLIDAY JUNCTION RUVB NUCLEOTIDE-BINDING ATP-BINDING SOS RECOMBINATION RESPONSE 186 260 2.0E-23 T 22-04-2016 IPR008823 DNA helicase, Holliday junction RuvB type, C-terminal GO:0003677|GO:0006281|GO:0006310|GO:0009378 SRM_RS06925 f6958ef8df04bd5ae4f08b3d7d265402 275 Pfam PF05496 Holliday junction DNA helicase ruvB N-terminus 1 170 8.1E-83 T 22-04-2016 IPR008824 Holliday junction DNA helicase ruvB, N-terminal GO:0006281|GO:0006310|GO:0009378 SRM_RS06925 f6958ef8df04bd5ae4f08b3d7d265402 275 Gene3D G3DSA:1.10.8.60 119 190 6.9E-32 T 22-04-2016 SRM_RS06925 f6958ef8df04bd5ae4f08b3d7d265402 275 Gene3D G3DSA:1.10.10.10 192 261 7.4E-31 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SRM_RS13360 56ef70ab4ed8d430b21762ae5f3460d1 149 PANTHER PTHR37460 4 148 1.2E-33 T 22-04-2016 SRM_RS13360 56ef70ab4ed8d430b21762ae5f3460d1 149 Pfam PF01986 Domain of unknown function DUF123 29 119 2.3E-26 T 22-04-2016 IPR002837 Protein of unknown function DUF123 SRM_RS13360 56ef70ab4ed8d430b21762ae5f3460d1 149 PANTHER PTHR37460:SF1 4 148 1.2E-33 T 22-04-2016 SRM_RS10060 38c4fd50bcd797a04693e430fde05dfb 307 SUPERFAMILY SSF102886 2 295 2.22E-115 T 22-04-2016 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-5531|MetaCyc: PWY-7159|UniPathway: UPA00251 SRM_RS10060 38c4fd50bcd797a04693e430fde05dfb 307 Pfam PF01218 Coproporphyrinogen III oxidase 4 295 1.3E-122 T 22-04-2016 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-5531|MetaCyc: PWY-7159|UniPathway: UPA00251 SRM_RS10060 38c4fd50bcd797a04693e430fde05dfb 307 PIRSF PIRSF000166 1 296 2.0E-118 T 22-04-2016 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-5531|MetaCyc: PWY-7159|UniPathway: UPA00251 SRM_RS10060 38c4fd50bcd797a04693e430fde05dfb 307 PANTHER PTHR10755 1 296 1.9E-156 T 22-04-2016 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-5531|MetaCyc: PWY-7159|UniPathway: UPA00251 SRM_RS10060 38c4fd50bcd797a04693e430fde05dfb 307 PRINTS PR00073 Coprogen oxidase signature 84 108 1.4E-78 T 22-04-2016 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-5531|MetaCyc: PWY-7159|UniPathway: UPA00251 SRM_RS10060 38c4fd50bcd797a04693e430fde05dfb 307 PRINTS PR00073 Coprogen oxidase signature 120 142 1.4E-78 T 22-04-2016 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-5531|MetaCyc: PWY-7159|UniPathway: UPA00251 SRM_RS10060 38c4fd50bcd797a04693e430fde05dfb 307 PRINTS PR00073 Coprogen oxidase signature 44 65 1.4E-78 T 22-04-2016 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-5531|MetaCyc: PWY-7159|UniPathway: UPA00251 SRM_RS10060 38c4fd50bcd797a04693e430fde05dfb 307 PRINTS PR00073 Coprogen oxidase signature 228 255 1.4E-78 T 22-04-2016 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-5531|MetaCyc: PWY-7159|UniPathway: UPA00251 SRM_RS10060 38c4fd50bcd797a04693e430fde05dfb 307 PRINTS PR00073 Coprogen oxidase signature 27 43 1.4E-78 T 22-04-2016 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-5531|MetaCyc: PWY-7159|UniPathway: UPA00251 SRM_RS10060 38c4fd50bcd797a04693e430fde05dfb 307 PRINTS PR00073 Coprogen oxidase signature 157 186 1.4E-78 T 22-04-2016 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-5531|MetaCyc: PWY-7159|UniPathway: UPA00251 SRM_RS10060 38c4fd50bcd797a04693e430fde05dfb 307 PRINTS PR00073 Coprogen oxidase signature 256 282 1.4E-78 T 22-04-2016 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-5531|MetaCyc: PWY-7159|UniPathway: UPA00251 SRM_RS10060 38c4fd50bcd797a04693e430fde05dfb 307 Gene3D G3DSA:3.40.1500.10 2 294 2.0E-120 T 22-04-2016 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-5531|MetaCyc: PWY-7159|UniPathway: UPA00251 SRM_RS03690 8262187cfa22ff73b74d483fe6f50533 250 SUPERFAMILY SSF51306 120 248 1.36E-13 T 22-04-2016 IPR015927 Peptidase S24/S26A/S26B/S26C SRM_RS03690 8262187cfa22ff73b74d483fe6f50533 250 PANTHER PTHR33516:SF2 36 250 4.5E-29 T 22-04-2016 SRM_RS03690 8262187cfa22ff73b74d483fe6f50533 250 Gene3D G3DSA:2.10.109.10 121 249 4.7E-17 T 22-04-2016 IPR028360 Peptidase S24/S26, beta-ribbon domain SRM_RS03690 8262187cfa22ff73b74d483fe6f50533 250 Pfam PF01726 LexA DNA binding domain 38 100 3.7E-17 T 22-04-2016 IPR006199 LexA repressor, DNA-binding domain GO:0004252|GO:0006508 SRM_RS03690 8262187cfa22ff73b74d483fe6f50533 250 PANTHER PTHR33516 36 250 4.5E-29 T 22-04-2016 SRM_RS03690 8262187cfa22ff73b74d483fe6f50533 250 Gene3D G3DSA:1.10.10.10 38 104 8.3E-24 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SRM_RS03690 8262187cfa22ff73b74d483fe6f50533 250 SUPERFAMILY SSF46785 39 106 2.12E-19 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SRM_RS09730 b4d4df7fbeb05b1ad26325633a78ab3e 474 Gene3D G3DSA:3.20.20.70 94 454 1.7E-131 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 SRM_RS09730 b4d4df7fbeb05b1ad26325633a78ab3e 474 PANTHER PTHR22893:SF14 94 457 3.7E-165 T 22-04-2016 SRM_RS09730 b4d4df7fbeb05b1ad26325633a78ab3e 474 Pfam PF00724 NADH:flavin oxidoreductase / NADH oxidase family 96 431 9.2E-87 T 22-04-2016 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal GO:0010181|GO:0016491|GO:0055114 SRM_RS09730 b4d4df7fbeb05b1ad26325633a78ab3e 474 SUPERFAMILY SSF51395 94 454 2.69E-121 T 22-04-2016 SRM_RS09730 b4d4df7fbeb05b1ad26325633a78ab3e 474 PANTHER PTHR22893 94 457 3.7E-165 T 22-04-2016 SRM_RS14000 1e5914a24595ce1000d9cf65102072e6 518 SMART SM00283 209 475 9.9E-88 T 22-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 SRM_RS14000 1e5914a24595ce1000d9cf65102072e6 518 Gene3D G3DSA:1.10.287.950 161 231 7.1E-4 T 22-04-2016 SRM_RS14000 1e5914a24595ce1000d9cf65102072e6 518 Gene3D G3DSA:1.10.287.950 232 445 4.2E-58 T 22-04-2016 SRM_RS14000 1e5914a24595ce1000d9cf65102072e6 518 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 307 334 1.2E-11 T 22-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 SRM_RS14000 1e5914a24595ce1000d9cf65102072e6 518 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 230 259 1.2E-11 T 22-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 SRM_RS14000 1e5914a24595ce1000d9cf65102072e6 518 SMART SM00304 129 194 0.002 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 SRM_RS14000 1e5914a24595ce1000d9cf65102072e6 518 SMART SM00304 49 101 6.1E-7 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 SRM_RS14000 1e5914a24595ce1000d9cf65102072e6 518 PANTHER PTHR32089 33 83 5.7E-106 T 22-04-2016 SRM_RS14000 1e5914a24595ce1000d9cf65102072e6 518 PANTHER PTHR32089 177 478 5.7E-106 T 22-04-2016 SRM_RS14000 1e5914a24595ce1000d9cf65102072e6 518 SUPERFAMILY SSF158472 55 99 3.4E-6 T 22-04-2016 SRM_RS14000 1e5914a24595ce1000d9cf65102072e6 518 Pfam PF00672 HAMP domain 31 98 3.6E-8 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 SRM_RS14000 1e5914a24595ce1000d9cf65102072e6 518 SUPERFAMILY SSF58104 162 480 3.23E-76 T 22-04-2016 SRM_RS14000 1e5914a24595ce1000d9cf65102072e6 518 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 272 474 1.1E-55 T 22-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 SRM_RS06370 da7c3d22c2300869bd738475f504d3e6 118 SMART SM00418 15 107 0.0077 T 22-04-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 SRM_RS06370 da7c3d22c2300869bd738475f504d3e6 118 SUPERFAMILY SSF46785 11 103 6.72E-15 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SRM_RS06370 da7c3d22c2300869bd738475f504d3e6 118 SMART SM00347 14 114 0.0086 T 22-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 SRM_RS06370 da7c3d22c2300869bd738475f504d3e6 118 Pfam PF13601 Winged helix DNA-binding domain 25 101 5.2E-19 T 22-04-2016 IPR027395 Winged helix DNA-binding domain SRM_RS06370 da7c3d22c2300869bd738475f504d3e6 118 Gene3D G3DSA:1.10.10.10 11 102 1.8E-22 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SRM_RS03595 563482c2d59f3c29bf21bab50f7b8e1f 436 Pfam PF07662 Na+ dependent nucleoside transporter C-terminus 207 434 1.1E-74 T 22-04-2016 IPR011657 Concentrative nucleoside transporter C-terminal domain Reactome: REACT_15518|Reactome: REACT_1698 SRM_RS03595 563482c2d59f3c29bf21bab50f7b8e1f 436 Pfam PF01773 Na+ dependent nucleoside transporter N-terminus 12 85 2.5E-26 T 22-04-2016 IPR002668 Concentrative nucleoside transporter N-terminal domain Reactome: REACT_15518|Reactome: REACT_1698 SRM_RS03595 563482c2d59f3c29bf21bab50f7b8e1f 436 PANTHER PTHR10590 314 435 1.1E-187 T 22-04-2016 IPR008276 Concentrative nucleoside transporter GO:0005337|GO:0016020|GO:1901642 Reactome: REACT_15518|Reactome: REACT_1698 SRM_RS03595 563482c2d59f3c29bf21bab50f7b8e1f 436 PANTHER PTHR10590 8 290 1.1E-187 T 22-04-2016 IPR008276 Concentrative nucleoside transporter GO:0005337|GO:0016020|GO:1901642 Reactome: REACT_15518|Reactome: REACT_1698 SRM_RS03595 563482c2d59f3c29bf21bab50f7b8e1f 436 Pfam PF07670 Nucleoside recognition 96 194 1.0E-7 T 22-04-2016 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain Reactome: REACT_15518|Reactome: REACT_1698 SRM_RS13120 a7fa0c9ef6a580dced8c86ceaf9fa3c9 271 PANTHER PTHR10992 18 140 4.4E-40 T 22-04-2016 SRM_RS13120 a7fa0c9ef6a580dced8c86ceaf9fa3c9 271 PANTHER PTHR10992 169 270 4.4E-40 T 22-04-2016 SRM_RS13120 a7fa0c9ef6a580dced8c86ceaf9fa3c9 271 SUPERFAMILY SSF53474 16 269 2.53E-46 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold SRM_RS13120 a7fa0c9ef6a580dced8c86ceaf9fa3c9 271 PRINTS PR00111 Alpha/beta hydrolase fold signature 99 112 1.4E-5 T 22-04-2016 IPR000073 Alpha/beta hydrolase fold-1 SRM_RS13120 a7fa0c9ef6a580dced8c86ceaf9fa3c9 271 PRINTS PR00111 Alpha/beta hydrolase fold signature 55 70 1.4E-5 T 22-04-2016 IPR000073 Alpha/beta hydrolase fold-1 SRM_RS13120 a7fa0c9ef6a580dced8c86ceaf9fa3c9 271 PRINTS PR00111 Alpha/beta hydrolase fold signature 214 228 1.4E-5 T 22-04-2016 IPR000073 Alpha/beta hydrolase fold-1 SRM_RS13120 a7fa0c9ef6a580dced8c86ceaf9fa3c9 271 Pfam PF12697 Alpha/beta hydrolase family 32 260 1.5E-21 T 22-04-2016 IPR000073 Alpha/beta hydrolase fold-1 SRM_RS13120 a7fa0c9ef6a580dced8c86ceaf9fa3c9 271 Gene3D G3DSA:3.40.50.1820 16 269 6.0E-48 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold SRM_RS02335 687f9a47b72fcb3172504a59e9ad8296 258 Pfam PF11249 Protein of unknown function (DUF3047) 77 183 2.8E-17 T 22-04-2016 IPR021409 Protein of unknown function DUF3047 SRM_RS01330 057278d86a63fc9be0e71046e6961642 153 Pfam PF06291 Bor protein 16 105 1.0E-7 T 22-04-2016 IPR010438 Bor GO:0009279 SRM_RS01330 057278d86a63fc9be0e71046e6961642 153 ProDom PD020173 BOR LIPOPROTEIN PLASMID ISS HOMOLOG MEMBRANE FROM PRECURSOR PALMITATE DLP12 21 105 8.0E-5 T 22-04-2016 IPR010438 Bor GO:0009279 SRM_RS10240 6521a5a32411505abefeb08f4c2f21cb 536 PANTHER PTHR22648 2 446 5.6E-112 T 22-04-2016 SRM_RS10240 6521a5a32411505abefeb08f4c2f21cb 536 Gene3D G3DSA:3.30.300.20 281 349 1.6E-22 T 22-04-2016 IPR015946 K homology domain-like, alpha/beta SRM_RS10240 6521a5a32411505abefeb08f4c2f21cb 536 Gene3D G3DSA:3.30.1480.10 3 128 7.6E-27 T 22-04-2016 IPR013735 Transcription factor NusA, N-terminal GO:0003700|GO:0031554 SRM_RS10240 6521a5a32411505abefeb08f4c2f21cb 536 SUPERFAMILY SSF54814 203 281 2.62E-29 T 22-04-2016 IPR009019 K homology domain, prokaryotic type GO:0003723 SRM_RS10240 6521a5a32411505abefeb08f4c2f21cb 536 Hamap MF_00945_B Transcription termination/antitermination protein NusA [nusA]. 3 412 28.341 T 22-04-2016 IPR030842 Transcription termination/antitermination protein NusA, bacterial GO:0006353|GO:0031564 SRM_RS10240 6521a5a32411505abefeb08f4c2f21cb 536 Pfam PF13184 NusA-like KH domain 233 300 1.3E-28 T 22-04-2016 IPR025249 KH domain, NusA-like GO:0003723 SRM_RS10240 6521a5a32411505abefeb08f4c2f21cb 536 Gene3D G3DSA:2.40.50.140 131 201 2.3E-15 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold SRM_RS10240 6521a5a32411505abefeb08f4c2f21cb 536 SUPERFAMILY SSF50249 135 202 8.14E-9 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold SRM_RS10240 6521a5a32411505abefeb08f4c2f21cb 536 Gene3D G3DSA:3.30.300.20 202 280 1.1E-34 T 22-04-2016 IPR015946 K homology domain-like, alpha/beta SRM_RS10240 6521a5a32411505abefeb08f4c2f21cb 536 Pfam PF08529 NusA N-terminal domain 6 127 2.3E-25 T 22-04-2016 IPR013735 Transcription factor NusA, N-terminal GO:0003700|GO:0031554 SRM_RS10240 6521a5a32411505abefeb08f4c2f21cb 536 TIGRFAM TIGR01953 NusA: transcription termination factor NusA 6 346 4.4E-112 T 22-04-2016 IPR010213 Transcription termination factor NusA GO:0003723 SRM_RS10240 6521a5a32411505abefeb08f4c2f21cb 536 SUPERFAMILY SSF69705 4 129 2.09E-27 T 22-04-2016 IPR013735 Transcription factor NusA, N-terminal GO:0003700|GO:0031554 SRM_RS10240 6521a5a32411505abefeb08f4c2f21cb 536 SUPERFAMILY SSF54814 282 345 2.29E-12 T 22-04-2016 IPR009019 K homology domain, prokaryotic type GO:0003723 SRM_RS10240 6521a5a32411505abefeb08f4c2f21cb 536 SMART SM00322 306 395 0.003 T 22-04-2016 IPR004087 K Homology domain GO:0003676 SRM_RS10240 6521a5a32411505abefeb08f4c2f21cb 536 SMART SM00322 233 296 7.0 T 22-04-2016 IPR004087 K Homology domain GO:0003676 SRM_RS10240 6521a5a32411505abefeb08f4c2f21cb 536 PANTHER PTHR22648:SF0 2 446 5.6E-112 T 22-04-2016 SRM_RS02760 4fd56a76bc897d58aa21cdb9db05b902 341 Pfam PF13377 Periplasmic binding protein-like domain 175 335 7.2E-41 T 22-04-2016 SRM_RS02760 4fd56a76bc897d58aa21cdb9db05b902 341 PANTHER PTHR30146 5 341 1.2E-105 T 22-04-2016 SRM_RS02760 4fd56a76bc897d58aa21cdb9db05b902 341 SUPERFAMILY SSF47413 5 62 2.59E-17 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 SRM_RS02760 4fd56a76bc897d58aa21cdb9db05b902 341 Gene3D G3DSA:3.40.50.2300 174 336 1.3E-62 T 22-04-2016 SRM_RS02760 4fd56a76bc897d58aa21cdb9db05b902 341 Gene3D G3DSA:3.40.50.2300 76 173 1.4E-15 T 22-04-2016 SRM_RS02760 4fd56a76bc897d58aa21cdb9db05b902 341 Pfam PF00356 Bacterial regulatory proteins, lacI family 6 51 6.5E-17 T 22-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 SRM_RS02760 4fd56a76bc897d58aa21cdb9db05b902 341 Gene3D G3DSA:1.10.260.40 5 63 1.2E-22 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 SRM_RS02760 4fd56a76bc897d58aa21cdb9db05b902 341 SUPERFAMILY SSF53822 76 337 2.55E-65 T 22-04-2016 IPR028082 Periplasmic binding protein-like I SRM_RS02760 4fd56a76bc897d58aa21cdb9db05b902 341 SMART SM00354 4 74 2.2E-21 T 22-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 SRM_RS13730 0d9516c397a9988b7a73edf95f0e34b2 137 Pfam PF01451 Low molecular weight phosphotyrosine protein phosphatase 4 128 2.6E-20 T 22-04-2016 IPR023485 Phosphotyrosine protein phosphatase I superfamily SRM_RS13730 0d9516c397a9988b7a73edf95f0e34b2 137 PANTHER PTHR11717:SF18 1 133 1.8E-43 T 22-04-2016 SRM_RS13730 0d9516c397a9988b7a73edf95f0e34b2 137 SMART SM00226 2 135 1.3E-43 T 22-04-2016 IPR023485 Phosphotyrosine protein phosphatase I superfamily SRM_RS13730 0d9516c397a9988b7a73edf95f0e34b2 137 PANTHER PTHR11717 1 133 1.8E-43 T 22-04-2016 SRM_RS13730 0d9516c397a9988b7a73edf95f0e34b2 137 SUPERFAMILY SSF52788 3 132 2.75E-42 T 22-04-2016 IPR023485 Phosphotyrosine protein phosphatase I superfamily SRM_RS13730 0d9516c397a9988b7a73edf95f0e34b2 137 Gene3D G3DSA:3.40.50.270 2 132 1.0E-42 T 22-04-2016 SRM_RS03750 918b0de305c017668a7b1ea973cc10f0 419 SUPERFAMILY SSF53067 6 193 2.32E-57 T 22-04-2016 SRM_RS03750 918b0de305c017668a7b1ea973cc10f0 419 PANTHER PTHR32432:SF4 1 378 1.2E-129 T 22-04-2016 SRM_RS03750 918b0de305c017668a7b1ea973cc10f0 419 SMART SM00842 6 192 2.7E-95 T 22-04-2016 IPR003494 SHS2 domain inserted in FtsA GO:0005515|GO:0007049 SRM_RS03750 918b0de305c017668a7b1ea973cc10f0 419 Gene3D G3DSA:3.30.420.40 294 348 3.7E-27 T 22-04-2016 SRM_RS03750 918b0de305c017668a7b1ea973cc10f0 419 Gene3D G3DSA:3.30.420.40 206 230 3.7E-27 T 22-04-2016 SRM_RS03750 918b0de305c017668a7b1ea973cc10f0 419 Gene3D G3DSA:3.30.1490.110 84 152 6.1E-20 T 22-04-2016 SRM_RS03750 918b0de305c017668a7b1ea973cc10f0 419 Gene3D G3DSA:3.90.640.10 231 293 6.7E-18 T 22-04-2016 SRM_RS03750 918b0de305c017668a7b1ea973cc10f0 419 Pfam PF14450 Cell division protein FtsA 203 371 7.2E-22 T 22-04-2016 SRM_RS03750 918b0de305c017668a7b1ea973cc10f0 419 Pfam PF14450 Cell division protein FtsA 7 186 1.0E-11 T 22-04-2016 SRM_RS03750 918b0de305c017668a7b1ea973cc10f0 419 SUPERFAMILY SSF53067 195 375 1.44E-39 T 22-04-2016 SRM_RS03750 918b0de305c017668a7b1ea973cc10f0 419 TIGRFAM TIGR01174 ftsA: cell division protein FtsA 5 375 5.7E-129 T 22-04-2016 IPR020823 Cell division protein FtsA GO:0007049 SRM_RS03750 918b0de305c017668a7b1ea973cc10f0 419 Gene3D G3DSA:3.30.420.40 153 205 2.9E-27 T 22-04-2016 SRM_RS03750 918b0de305c017668a7b1ea973cc10f0 419 Gene3D G3DSA:3.30.420.40 2 79 2.9E-27 T 22-04-2016 SRM_RS03750 918b0de305c017668a7b1ea973cc10f0 419 Pfam PF02491 SHS2 domain inserted in FTSA 81 158 1.1E-32 T 22-04-2016 IPR003494 SHS2 domain inserted in FtsA GO:0005515|GO:0007049 SRM_RS03750 918b0de305c017668a7b1ea973cc10f0 419 Hamap MF_02033 Cell division protein FtsA [ftsA]. 2 416 30.49 T 22-04-2016 IPR020823 Cell division protein FtsA GO:0007049 SRM_RS03750 918b0de305c017668a7b1ea973cc10f0 419 PANTHER PTHR32432 1 378 1.2E-129 T 22-04-2016 SRM_RS03750 918b0de305c017668a7b1ea973cc10f0 419 PIRSF PIRSF003101 1 416 4.7E-143 T 22-04-2016 IPR020823 Cell division protein FtsA GO:0007049 SRM_RS02180 34e7b40e18eaaf93a3e02563c0d24bcd 440 Gene3D G3DSA:1.25.40.10 64 103 1.1E-8 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 SRM_RS02180 34e7b40e18eaaf93a3e02563c0d24bcd 440 Gene3D G3DSA:1.25.40.10 149 163 1.1E-8 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 SRM_RS02180 34e7b40e18eaaf93a3e02563c0d24bcd 440 Gene3D G3DSA:1.25.40.10 286 389 1.1E-8 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 SRM_RS02180 34e7b40e18eaaf93a3e02563c0d24bcd 440 Pfam PF14322 Starch-binding associating with outer membrane 24 180 5.8E-7 T 22-04-2016 SRM_RS02180 34e7b40e18eaaf93a3e02563c0d24bcd 440 SUPERFAMILY SSF48452 7 438 4.3E-24 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 SRM_RS02180 34e7b40e18eaaf93a3e02563c0d24bcd 440 Pfam PF07980 SusD family 305 431 4.2E-6 T 22-04-2016 IPR012944 RagB/SusD domain SRM_RS01220 c0ceb853807f6b69a76d522d051e01b6 372 Pfam PF11376 Protein of unknown function (DUF3179) 50 362 2.2E-104 T 22-04-2016 IPR021516 Protein of unknown function DUF3179 SRM_RS02840 790dc2140aadcc5450b0bf6407f5f2d6 446 ProSitePatterns PS00181 Glutamine synthetase putative ATP-binding region signature. 235 250 - T 22-04-2016 IPR027303 Glutamine synthetase, glycine-rich site KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 SRM_RS02840 790dc2140aadcc5450b0bf6407f5f2d6 446 SMART SM01230 107 356 2.0E-134 T 22-04-2016 IPR008146 Glutamine synthetase, catalytic domain GO:0004356|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 SRM_RS02840 790dc2140aadcc5450b0bf6407f5f2d6 446 SUPERFAMILY SSF54368 3 104 1.7E-30 T 22-04-2016 IPR008147 Glutamine synthetase, beta-Grasp domain GO:0004356|GO:0006542|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 SRM_RS02840 790dc2140aadcc5450b0bf6407f5f2d6 446 ProSitePatterns PS00180 Glutamine synthetase signature 1. 50 68 - T 22-04-2016 IPR027302 Glutamine synthetase, N-terminal conserved site KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 SRM_RS02840 790dc2140aadcc5450b0bf6407f5f2d6 446 TIGRFAM TIGR00653 GlnA: glutamine synthetase, type I 6 443 6.3E-164 T 22-04-2016 IPR004809 Glutamine synthetase type I GO:0004356|GO:0005737|GO:0009399 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 SRM_RS02840 790dc2140aadcc5450b0bf6407f5f2d6 446 Gene3D G3DSA:3.30.590.10 111 431 1.6E-124 T 22-04-2016 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain GO:0003824 Reactome: REACT_13 SRM_RS02840 790dc2140aadcc5450b0bf6407f5f2d6 446 Pfam PF00120 Glutamine synthetase, catalytic domain 108 442 1.1E-133 T 22-04-2016 IPR008146 Glutamine synthetase, catalytic domain GO:0004356|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 SRM_RS02840 790dc2140aadcc5450b0bf6407f5f2d6 446 PANTHER PTHR20852:SF7 6 446 1.8E-172 T 22-04-2016 SRM_RS02840 790dc2140aadcc5450b0bf6407f5f2d6 446 SUPERFAMILY SSF55931 109 444 1.18E-122 T 22-04-2016 SRM_RS02840 790dc2140aadcc5450b0bf6407f5f2d6 446 Pfam PF03951 Glutamine synthetase, beta-Grasp domain 16 99 1.7E-28 T 22-04-2016 IPR008147 Glutamine synthetase, beta-Grasp domain GO:0004356|GO:0006542|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 SRM_RS02840 790dc2140aadcc5450b0bf6407f5f2d6 446 PANTHER PTHR20852 6 446 1.8E-172 T 22-04-2016 SRM_RS02840 790dc2140aadcc5450b0bf6407f5f2d6 446 Gene3D G3DSA:3.10.20.70 3 110 6.4E-37 T 22-04-2016 IPR008147 Glutamine synthetase, beta-Grasp domain GO:0004356|GO:0006542|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 SRM_RS02160 110e8f615ae6b011edd7acf29a0fb61c 214 Gene3D G3DSA:1.10.10.10 1 76 1.3E-12 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SRM_RS02160 110e8f615ae6b011edd7acf29a0fb61c 214 PANTHER PTHR30363 5 211 2.3E-19 T 22-04-2016 SRM_RS02160 110e8f615ae6b011edd7acf29a0fb61c 214 SUPERFAMILY SSF46785 3 192 1.34E-25 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SRM_RS02160 110e8f615ae6b011edd7acf29a0fb61c 214 PANTHER PTHR30363:SF17 5 211 2.3E-19 T 22-04-2016 SRM_RS10040 c75bd973fc89b8ab2fe77446f745fa12 423 Pfam PF07690 Major Facilitator Superfamily 22 226 3.1E-24 T 22-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 SRM_RS10040 c75bd973fc89b8ab2fe77446f745fa12 423 Pfam PF07690 Major Facilitator Superfamily 247 411 1.1E-18 T 22-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 SRM_RS10040 c75bd973fc89b8ab2fe77446f745fa12 423 SUPERFAMILY SSF103473 15 220 1.29E-28 T 22-04-2016 IPR020846 Major facilitator superfamily domain SRM_RS10040 c75bd973fc89b8ab2fe77446f745fa12 423 ProSitePatterns PS00216 Sugar transport proteins signature 1. 79 96 - T 22-04-2016 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 SRM_RS10040 c75bd973fc89b8ab2fe77446f745fa12 423 ProSitePatterns PS00216 Sugar transport proteins signature 1. 294 310 - T 22-04-2016 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 SRM_RS10040 c75bd973fc89b8ab2fe77446f745fa12 423 PANTHER PTHR23504 1 408 2.6E-19 T 22-04-2016 SRM_RS10040 c75bd973fc89b8ab2fe77446f745fa12 423 SUPERFAMILY SSF103473 241 415 3.01E-23 T 22-04-2016 IPR020846 Major facilitator superfamily domain SRM_RS10040 c75bd973fc89b8ab2fe77446f745fa12 423 Gene3D G3DSA:1.20.1250.20 240 411 9.6E-19 T 22-04-2016 SRM_RS10040 c75bd973fc89b8ab2fe77446f745fa12 423 Gene3D G3DSA:1.20.1250.20 15 218 7.2E-30 T 22-04-2016 SRM_RS13715 b00b9b56bf460f3eea41a1ca56755bfc 153 PANTHER PTHR33452 20 151 6.7E-29 T 22-04-2016 SRM_RS13715 b00b9b56bf460f3eea41a1ca56755bfc 153 Pfam PF07681 DoxX 19 97 8.0E-18 T 22-04-2016 IPR032808 DoxX family SRM_RS13715 b00b9b56bf460f3eea41a1ca56755bfc 153 PANTHER PTHR33452:SF9 20 151 6.7E-29 T 22-04-2016 SRM_RS06430 486c020c2992525f95132db66d959a61 391 Pfam PF00571 CBS domain 299 346 1.2E-6 T 22-04-2016 IPR000644 CBS domain SRM_RS06430 486c020c2992525f95132db66d959a61 391 Pfam PF00571 CBS domain 236 290 1.0E-5 T 22-04-2016 IPR000644 CBS domain SRM_RS06430 486c020c2992525f95132db66d959a61 391 PIRSF PIRSF006404 1 361 2.9E-104 T 22-04-2016 IPR016483 Uncharacterised conserved protein UCP006404, peptidase M50/CBS SRM_RS06430 486c020c2992525f95132db66d959a61 391 Gene3D G3DSA:3.10.580.10 235 350 5.8E-19 T 22-04-2016 SRM_RS06430 486c020c2992525f95132db66d959a61 391 Pfam PF01590 GAF domain 293 346 1.5E-5 T 22-04-2016 IPR003018 GAF domain GO:0005515 SRM_RS06430 486c020c2992525f95132db66d959a61 391 SMART SM00116 305 352 8.3E-5 T 22-04-2016 IPR000644 CBS domain SRM_RS06430 486c020c2992525f95132db66d959a61 391 SMART SM00116 243 290 0.029 T 22-04-2016 IPR000644 CBS domain SRM_RS06430 486c020c2992525f95132db66d959a61 391 SUPERFAMILY SSF54631 234 351 8.17E-24 T 22-04-2016 SRM_RS06430 486c020c2992525f95132db66d959a61 391 PANTHER PTHR39188 8 325 4.8E-29 T 22-04-2016 SRM_RS06430 486c020c2992525f95132db66d959a61 391 Pfam PF02163 Peptidase family M50 48 119 2.1E-7 T 22-04-2016 IPR008915 Peptidase M50 GO:0004222|GO:0006508 SRM_RS06430 486c020c2992525f95132db66d959a61 391 Pfam PF02163 Peptidase family M50 135 175 6.5E-7 T 22-04-2016 IPR008915 Peptidase M50 GO:0004222|GO:0006508 SRM_RS02165 515098d5b5fe1e3e1c87748200f4d131 512 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 20 42 1.9E-6 T 22-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 SRM_RS02165 515098d5b5fe1e3e1c87748200f4d131 512 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 142 150 1.9E-6 T 22-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 SRM_RS02165 515098d5b5fe1e3e1c87748200f4d131 512 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 181 205 1.9E-6 T 22-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 SRM_RS02165 515098d5b5fe1e3e1c87748200f4d131 512 SUPERFAMILY SSF51905 289 484 6.47E-18 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SRM_RS02165 515098d5b5fe1e3e1c87748200f4d131 512 PANTHER PTHR23023:SF132 16 224 1.6E-183 T 22-04-2016 SRM_RS02165 515098d5b5fe1e3e1c87748200f4d131 512 PANTHER PTHR23023:SF132 240 499 1.6E-183 T 22-04-2016 SRM_RS02165 515098d5b5fe1e3e1c87748200f4d131 512 Pfam PF00743 Flavin-binding monooxygenase-like 20 222 7.8E-17 T 22-04-2016 IPR020946 Flavin monooxygenase-like GO:0004499|GO:0050660|GO:0050661|GO:0055114 SRM_RS02165 515098d5b5fe1e3e1c87748200f4d131 512 SUPERFAMILY SSF51905 20 287 1.5E-58 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SRM_RS02165 515098d5b5fe1e3e1c87748200f4d131 512 Gene3D G3DSA:3.50.50.60 5 220 4.1E-67 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SRM_RS02165 515098d5b5fe1e3e1c87748200f4d131 512 Gene3D G3DSA:3.50.50.60 343 499 3.7E-18 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SRM_RS02165 515098d5b5fe1e3e1c87748200f4d131 512 PANTHER PTHR23023 16 224 1.6E-183 T 22-04-2016 SRM_RS02165 515098d5b5fe1e3e1c87748200f4d131 512 PANTHER PTHR23023 240 499 1.6E-183 T 22-04-2016 SRM_RS05890 9ef454e949d0fd54d848c597258ccd76 491 Pfam PF02875 Mur ligase family, glutamate ligase domain 341 416 5.1E-11 T 22-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 SRM_RS05890 9ef454e949d0fd54d848c597258ccd76 491 PANTHER PTHR23135:SF5 22 471 1.5E-116 T 22-04-2016 SRM_RS05890 9ef454e949d0fd54d848c597258ccd76 491 SUPERFAMILY SSF53623 120 338 6.8E-54 T 22-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 SRM_RS05890 9ef454e949d0fd54d848c597258ccd76 491 SUPERFAMILY SSF51984 28 115 1.7E-20 T 22-04-2016 SRM_RS05890 9ef454e949d0fd54d848c597258ccd76 491 SUPERFAMILY SSF53244 339 487 2.75E-36 T 22-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 SRM_RS05890 9ef454e949d0fd54d848c597258ccd76 491 Gene3D G3DSA:3.40.50.720 24 115 1.5E-31 T 22-04-2016 IPR016040 NAD(P)-binding domain SRM_RS05890 9ef454e949d0fd54d848c597258ccd76 491 PANTHER PTHR23135 22 471 1.5E-116 T 22-04-2016 SRM_RS05890 9ef454e949d0fd54d848c597258ccd76 491 Pfam PF08245 Mur ligase middle domain 135 319 4.9E-23 T 22-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 SRM_RS05890 9ef454e949d0fd54d848c597258ccd76 491 Gene3D G3DSA:3.90.190.20 342 487 1.6E-36 T 22-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 SRM_RS05890 9ef454e949d0fd54d848c597258ccd76 491 Pfam PF01225 Mur ligase family, catalytic domain 29 127 7.4E-14 T 22-04-2016 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 UniPathway: UPA00219 SRM_RS05890 9ef454e949d0fd54d848c597258ccd76 491 Gene3D G3DSA:3.40.1190.10 120 341 6.6E-78 T 22-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 SRM_RS03020 eee0a0832e1ec3880f8da8e0cd7bac44 127 SUPERFAMILY SSF110069 7 123 2.49E-32 T 22-04-2016 IPR007474 ApaG domain SRM_RS03020 eee0a0832e1ec3880f8da8e0cd7bac44 127 PANTHER PTHR14289 6 122 1.8E-25 T 22-04-2016 SRM_RS03020 eee0a0832e1ec3880f8da8e0cd7bac44 127 Gene3D G3DSA:2.60.40.1470 6 124 6.9E-32 T 22-04-2016 IPR007474 ApaG domain SRM_RS03020 eee0a0832e1ec3880f8da8e0cd7bac44 127 PANTHER PTHR14289:SF16 6 122 1.8E-25 T 22-04-2016 SRM_RS03020 eee0a0832e1ec3880f8da8e0cd7bac44 127 Pfam PF04379 Protein of unknown function (DUF525) 24 106 4.3E-21 T 22-04-2016 IPR007474 ApaG domain SRM_RS04185 20073595afba5a3d7e222892633d039c 334 PANTHER PTHR33055 11 329 8.9E-68 T 22-04-2016 SRM_RS04185 20073595afba5a3d7e222892633d039c 334 PANTHER PTHR33055:SF3 11 329 8.9E-68 T 22-04-2016 SRM_RS04185 20073595afba5a3d7e222892633d039c 334 Pfam PF01548 Transposase 15 163 4.2E-30 T 22-04-2016 IPR002525 Transposase, IS111A/IS1328/IS1533, N-terminal GO:0003677|GO:0004803|GO:0006313 SRM_RS04185 20073595afba5a3d7e222892633d039c 334 Pfam PF02371 Transposase IS116/IS110/IS902 family 205 290 1.5E-27 T 22-04-2016 IPR003346 Transposase, IS116/IS110/IS902 GO:0003677|GO:0004803|GO:0006313 SRM_RS03405 84d43c71871542e46a5fa6edeeaaeac7 347 PANTHER PTHR34388 3 345 7.4E-55 T 22-04-2016 SRM_RS03405 84d43c71871542e46a5fa6edeeaaeac7 347 Gene3D G3DSA:3.40.50.300 18 134 1.7E-9 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SRM_RS03405 84d43c71871542e46a5fa6edeeaaeac7 347 SUPERFAMILY SSF48019 213 337 2.72E-13 T 22-04-2016 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal GO:0003677|GO:0006260 Reactome: REACT_152|Reactome: REACT_1538|Reactome: REACT_216|Reactome: REACT_22172|Reactome: REACT_383 SRM_RS03405 84d43c71871542e46a5fa6edeeaaeac7 347 Pfam PF06144 DNA polymerase III, delta subunit 25 189 2.1E-26 T 22-04-2016 IPR010372 DNA polymerase III delta, N-terminal GO:0003677|GO:0003887|GO:0006260|GO:0009360 SRM_RS03405 84d43c71871542e46a5fa6edeeaaeac7 347 TIGRFAM TIGR01128 holA: DNA polymerase III, delta subunit 22 335 4.2E-65 T 22-04-2016 IPR005790 DNA polymerase III, delta subunit GO:0003677|GO:0006260 SRM_RS03405 84d43c71871542e46a5fa6edeeaaeac7 347 SUPERFAMILY SSF52540 17 205 3.4E-22 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SRM_RS03405 84d43c71871542e46a5fa6edeeaaeac7 347 Gene3D G3DSA:1.10.8.60 144 232 1.2E-20 T 22-04-2016 SRM_RS12600 d7b3388460f25e9f1456928ae7e5a373 626 TIGRFAM TIGR00644 recJ: single-stranded-DNA-specific exonuclease RecJ 72 620 1.5E-158 T 22-04-2016 IPR004610 Bacterial RecJ exonuclease GO:0006281|GO:0006310|GO:0008409 SRM_RS12600 d7b3388460f25e9f1456928ae7e5a373 626 PANTHER PTHR30255 43 625 5.2E-213 T 22-04-2016 SRM_RS12600 d7b3388460f25e9f1456928ae7e5a373 626 Pfam PF01368 DHH family 126 259 4.8E-10 T 22-04-2016 IPR001667 DDH domain SRM_RS12600 d7b3388460f25e9f1456928ae7e5a373 626 SUPERFAMILY SSF64182 100 501 1.06E-113 T 22-04-2016 SRM_RS12600 d7b3388460f25e9f1456928ae7e5a373 626 PANTHER PTHR30255:SF2 43 625 5.2E-213 T 22-04-2016 SRM_RS12600 d7b3388460f25e9f1456928ae7e5a373 626 Pfam PF02272 DHHA1 domain 422 485 2.3E-12 T 22-04-2016 IPR003156 DHHA1 domain GO:0003676 KEGG: 00970+6.1.1.7 SRM_RS02505 1596c719dbd4459dabcef68500e76e4b 557 Pfam PF00115 Cytochrome C and Quinol oxidase polypeptide I 12 473 2.5E-85 T 22-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 SRM_RS02505 1596c719dbd4459dabcef68500e76e4b 557 SUPERFAMILY SSF81442 11 549 3.27E-104 T 22-04-2016 IPR023616 Cytochrome c oxidase, subunit I domain GO:0004129|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 SRM_RS02505 1596c719dbd4459dabcef68500e76e4b 557 PANTHER PTHR10422 12 557 3.5E-153 T 22-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 SRM_RS02505 1596c719dbd4459dabcef68500e76e4b 557 PANTHER PTHR10422:SF17 12 557 3.5E-153 T 22-04-2016 SRM_RS02505 1596c719dbd4459dabcef68500e76e4b 557 Gene3D G3DSA:1.20.210.10 10 497 7.2E-81 T 22-04-2016 IPR023616 Cytochrome c oxidase, subunit I domain GO:0004129|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 SRM_RS02505 1596c719dbd4459dabcef68500e76e4b 557 PRINTS PR01165 Cytochrome c oxidase subunit I signature 422 443 2.8E-12 T 22-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 SRM_RS02505 1596c719dbd4459dabcef68500e76e4b 557 PRINTS PR01165 Cytochrome c oxidase subunit I signature 222 243 2.8E-12 T 22-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 SRM_RS02505 1596c719dbd4459dabcef68500e76e4b 557 PRINTS PR01165 Cytochrome c oxidase subunit I signature 293 314 2.8E-12 T 22-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 SRM_RS02505 1596c719dbd4459dabcef68500e76e4b 557 PRINTS PR01165 Cytochrome c oxidase subunit I signature 124 136 2.8E-12 T 22-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 SRM_RS12920 b81aa42c73e777f4bb9009c6bdc36abb 2371 Pfam PF00041 Fibronectin type III domain 508 591 9.5E-9 T 22-04-2016 IPR003961 Fibronectin type III GO:0005515 SRM_RS12920 b81aa42c73e777f4bb9009c6bdc36abb 2371 PANTHER PTHR10795:SF419 234 501 4.0E-30 T 22-04-2016 SRM_RS12920 b81aa42c73e777f4bb9009c6bdc36abb 2371 PANTHER PTHR10795:SF419 2243 2251 4.0E-30 T 22-04-2016 SRM_RS12920 b81aa42c73e777f4bb9009c6bdc36abb 2371 Gene3D G3DSA:2.60.40.10 505 611 1.2E-12 T 22-04-2016 IPR013783 Immunoglobulin-like fold SRM_RS12920 b81aa42c73e777f4bb9009c6bdc36abb 2371 SUPERFAMILY SSF49265 504 611 6.04E-11 T 22-04-2016 IPR003961 Fibronectin type III GO:0005515 SRM_RS12920 b81aa42c73e777f4bb9009c6bdc36abb 2371 Pfam PF15780 Abnormal spindle-like microcephaly-assoc'd, ASPM-SPD-2-Hydin 1030 1120 1.3E-11 T 22-04-2016 IPR031549 Abnormal spindle-like microcephaly-associated protein, ASH domain SRM_RS12920 b81aa42c73e777f4bb9009c6bdc36abb 2371 PRINTS PR00723 Subtilisin serine protease family (S8) signature 268 281 7.7E-12 T 22-04-2016 IPR015500 Peptidase S8, subtilisin-related SRM_RS12920 b81aa42c73e777f4bb9009c6bdc36abb 2371 PRINTS PR00723 Subtilisin serine protease family (S8) signature 441 457 7.7E-12 T 22-04-2016 IPR015500 Peptidase S8, subtilisin-related SRM_RS12920 b81aa42c73e777f4bb9009c6bdc36abb 2371 PRINTS PR00723 Subtilisin serine protease family (S8) signature 210 229 7.7E-12 T 22-04-2016 IPR015500 Peptidase S8, subtilisin-related SRM_RS12920 b81aa42c73e777f4bb9009c6bdc36abb 2371 SUPERFAMILY SSF63446 2062 2129 8.24E-5 T 22-04-2016 IPR016134 Dockerin domain GO:0000272 SRM_RS12920 b81aa42c73e777f4bb9009c6bdc36abb 2371 PANTHER PTHR10795 234 501 4.0E-30 T 22-04-2016 IPR015500 Peptidase S8, subtilisin-related SRM_RS12920 b81aa42c73e777f4bb9009c6bdc36abb 2371 PANTHER PTHR10795 2243 2251 4.0E-30 T 22-04-2016 IPR015500 Peptidase S8, subtilisin-related SRM_RS12920 b81aa42c73e777f4bb9009c6bdc36abb 2371 Gene3D G3DSA:1.10.1330.10 2063 2129 4.3E-5 T 22-04-2016 IPR016134 Dockerin domain GO:0000272 SRM_RS12920 b81aa42c73e777f4bb9009c6bdc36abb 2371 SUPERFAMILY SSF63825 738 929 9.42E-11 T 22-04-2016 SRM_RS12920 b81aa42c73e777f4bb9009c6bdc36abb 2371 Gene3D G3DSA:2.60.40.360 1538 1635 1.7E-8 T 22-04-2016 IPR008962 PapD-like SRM_RS12920 b81aa42c73e777f4bb9009c6bdc36abb 2371 Gene3D G3DSA:2.60.40.360 1027 1126 1.6E-10 T 22-04-2016 IPR008962 PapD-like SRM_RS12920 b81aa42c73e777f4bb9009c6bdc36abb 2371 Pfam PF16361 N-terminal of Subtilase family 61 197 7.2E-18 T 22-04-2016 IPR032304 Subtilase, N-terminal SRM_RS12920 b81aa42c73e777f4bb9009c6bdc36abb 2371 ProSitePatterns PS00138 Serine proteases, subtilase family, serine active site. 442 452 - T 22-04-2016 IPR023828 Peptidase S8, subtilisin, Ser-active site SRM_RS12920 b81aa42c73e777f4bb9009c6bdc36abb 2371 Gene3D G3DSA:2.130.10.10 1241 1421 4.2E-5 T 22-04-2016 IPR015943 WD40/YVTN repeat-like-containing domain GO:0005515 SRM_RS12920 b81aa42c73e777f4bb9009c6bdc36abb 2371 SMART SM00060 506 596 3.5E-9 T 22-04-2016 IPR003961 Fibronectin type III GO:0005515 SRM_RS12920 b81aa42c73e777f4bb9009c6bdc36abb 2371 TIGRFAM TIGR04183 Por_Secre_tail: Por secretion system C-terminal sorting domain 2288 2355 1.6E-7 T 22-04-2016 IPR026444 Secretion system C-terminal sorting domain SRM_RS12920 b81aa42c73e777f4bb9009c6bdc36abb 2371 SUPERFAMILY SSF52743 192 499 8.77E-54 T 22-04-2016 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 SRM_RS12920 b81aa42c73e777f4bb9009c6bdc36abb 2371 SUPERFAMILY SSF101898 1247 1459 1.96E-13 T 22-04-2016 SRM_RS12920 b81aa42c73e777f4bb9009c6bdc36abb 2371 ProSitePatterns PS00137 Serine proteases, subtilase family, histidine active site. 272 282 - T 22-04-2016 IPR022398 Peptidase S8, subtilisin, His-active site SRM_RS12920 b81aa42c73e777f4bb9009c6bdc36abb 2371 Gene3D G3DSA:3.40.50.200 176 499 1.0E-63 T 22-04-2016 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 SRM_RS12920 b81aa42c73e777f4bb9009c6bdc36abb 2371 Pfam PF00082 Subtilase family 212 482 8.8E-30 T 22-04-2016 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 SRM_RS14045 4e213af573c4e67233f624e3d50fb243 443 TIGRFAM TIGR00737 nifR3_yhdG: putative TIM-barrel protein, nifR3 family 76 384 2.1E-95 T 22-04-2016 IPR004652 tRNA-dihydrouridine synthase, TIM-barrel, NifR3 GO:0008033|GO:0016491|GO:0050660|GO:0055114 SRM_RS14045 4e213af573c4e67233f624e3d50fb243 443 Gene3D G3DSA:3.20.20.70 75 313 4.1E-80 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 SRM_RS14045 4e213af573c4e67233f624e3d50fb243 443 PANTHER PTHR11082 62 388 1.8E-118 T 22-04-2016 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 SRM_RS14045 4e213af573c4e67233f624e3d50fb243 443 PANTHER PTHR11082:SF25 62 388 1.8E-118 T 22-04-2016 SRM_RS14045 4e213af573c4e67233f624e3d50fb243 443 Pfam PF01207 Dihydrouridine synthase (Dus) 79 380 4.4E-85 T 22-04-2016 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 SRM_RS14045 4e213af573c4e67233f624e3d50fb243 443 Gene3D G3DSA:1.10.1200.80 319 388 3.4E-19 T 22-04-2016 IPR024036 tRNA-dihydrouridine synthase, putative, C-terminal GO:0016491|GO:0055114 SRM_RS14045 4e213af573c4e67233f624e3d50fb243 443 SUPERFAMILY SSF51395 76 379 4.39E-85 T 22-04-2016 SRM_RS14045 4e213af573c4e67233f624e3d50fb243 443 ProSitePatterns PS01136 Uncharacterized protein family UPF0034 signature. 159 177 - T 22-04-2016 IPR018517 tRNA-dihydrouridine synthase, conserved site GO:0008033|GO:0017150|GO:0050660|GO:0055114 SRM_RS03745 0c6a7d0c9a543e86ab32f50c28499869 259 Pfam PF03799 Cell division protein FtsQ 121 245 2.2E-7 T 22-04-2016 IPR005548 Cell division protein FtsQ/DivIB SRM_RS03745 0c6a7d0c9a543e86ab32f50c28499869 259 Pfam PF08478 POTRA domain, FtsQ-type 42 109 1.2E-7 T 22-04-2016 IPR013685 Polypeptide-transport-associated, FtsQ-type SRM_RS03745 0c6a7d0c9a543e86ab32f50c28499869 259 Hamap MF_00911 Cell division protein FtsQ [ftsQ]. 13 251 18.323 T 22-04-2016 IPR026579 Cell division protein FtsQ GO:0000917 SRM_RS10350 914964be5254c5a7c1623bd70691be79 331 SMART SM00382 49 192 7.7E-4 T 22-04-2016 IPR003593 AAA+ ATPase domain SRM_RS10350 914964be5254c5a7c1623bd70691be79 331 SUPERFAMILY SSF52540 22 306 4.54E-45 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SRM_RS10350 914964be5254c5a7c1623bd70691be79 331 PANTHER PTHR11603:SF156 15 331 1.5E-140 T 22-04-2016 SRM_RS10350 914964be5254c5a7c1623bd70691be79 331 Gene3D G3DSA:3.40.50.300 34 200 8.6E-46 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SRM_RS10350 914964be5254c5a7c1623bd70691be79 331 Pfam PF07726 ATPase family associated with various cellular activities (AAA) 52 184 2.5E-65 T 22-04-2016 IPR011703 ATPase, AAA-3 GO:0005524|GO:0016887 SRM_RS10350 914964be5254c5a7c1623bd70691be79 331 Gene3D G3DSA:1.10.8.300 214 330 1.5E-32 T 22-04-2016 SRM_RS10350 914964be5254c5a7c1623bd70691be79 331 PANTHER PTHR11603 15 331 1.5E-140 T 22-04-2016 SRM_RS10350 914964be5254c5a7c1623bd70691be79 331 PIRSF PIRSF002849 2 331 5.2E-125 T 22-04-2016 IPR016366 ATPase chaperone, AAA-type, MoxR, predicted SRM_RS15735 02ba658ebc34319f14eb2ad3772ba51d 322 Gene3D G3DSA:2.20.25.10 283 311 5.2E-4 T 22-04-2016 SRM_RS15735 02ba658ebc34319f14eb2ad3772ba51d 322 PANTHER PTHR26402 68 287 2.6E-33 T 22-04-2016 SRM_RS15735 02ba658ebc34319f14eb2ad3772ba51d 322 PANTHER PTHR26402:SF524 68 287 2.6E-33 T 22-04-2016 SRM_RS15735 02ba658ebc34319f14eb2ad3772ba51d 322 SUPERFAMILY SSF52172 67 190 2.99E-31 T 22-04-2016 IPR011006 CheY-like superfamily SRM_RS15735 02ba658ebc34319f14eb2ad3772ba51d 322 Pfam PF04397 LytTr DNA-binding domain 222 318 1.2E-27 T 22-04-2016 IPR007492 LytTR DNA-binding domain GO:0003677 SRM_RS15735 02ba658ebc34319f14eb2ad3772ba51d 322 Pfam PF00072 Response regulator receiver domain 71 178 1.6E-23 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SRM_RS15735 02ba658ebc34319f14eb2ad3772ba51d 322 Gene3D G3DSA:2.40.50.40 214 282 2.0E-23 T 22-04-2016 SRM_RS15735 02ba658ebc34319f14eb2ad3772ba51d 322 SMART SM00850 222 319 2.4E-37 T 22-04-2016 IPR007492 LytTR DNA-binding domain GO:0003677 SRM_RS15735 02ba658ebc34319f14eb2ad3772ba51d 322 Gene3D G3DSA:3.40.50.2300 62 189 7.6E-33 T 22-04-2016 SRM_RS15735 02ba658ebc34319f14eb2ad3772ba51d 322 SMART SM00448 68 178 6.9E-25 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SRM_RS09815 5892e5f4aacb005b5daf29a6ac91dcab 354 TIGRFAM TIGR01464 hemE: uroporphyrinogen decarboxylase 12 346 2.2E-129 T 22-04-2016 IPR006361 Uroporphyrinogen decarboxylase HemE GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|UniPathway: UPA00251 SRM_RS09815 5892e5f4aacb005b5daf29a6ac91dcab 354 PANTHER PTHR21091:SF2 8 354 7.7E-171 T 22-04-2016 SRM_RS09815 5892e5f4aacb005b5daf29a6ac91dcab 354 Gene3D G3DSA:3.20.20.210 3 351 1.7E-160 T 22-04-2016 SRM_RS09815 5892e5f4aacb005b5daf29a6ac91dcab 354 PANTHER PTHR21091 8 354 7.7E-171 T 22-04-2016 SRM_RS09815 5892e5f4aacb005b5daf29a6ac91dcab 354 ProSitePatterns PS00907 Uroporphyrinogen decarboxylase signature 2. 144 160 - T 22-04-2016 IPR000257 Uroporphyrinogen decarboxylase (URO-D) GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|UniPathway: UPA00251 SRM_RS09815 5892e5f4aacb005b5daf29a6ac91dcab 354 Hamap MF_00218 Uroporphyrinogen decarboxylase [hemE]. 9 348 45.288 T 22-04-2016 IPR006361 Uroporphyrinogen decarboxylase HemE GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|UniPathway: UPA00251 SRM_RS09815 5892e5f4aacb005b5daf29a6ac91dcab 354 Pfam PF01208 Uroporphyrinogen decarboxylase (URO-D) 8 347 9.9E-139 T 22-04-2016 IPR000257 Uroporphyrinogen decarboxylase (URO-D) GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|UniPathway: UPA00251 SRM_RS09815 5892e5f4aacb005b5daf29a6ac91dcab 354 ProSitePatterns PS00906 Uroporphyrinogen decarboxylase signature 1. 25 34 - T 22-04-2016 IPR000257 Uroporphyrinogen decarboxylase (URO-D) GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|UniPathway: UPA00251 SRM_RS09815 5892e5f4aacb005b5daf29a6ac91dcab 354 SUPERFAMILY SSF51726 6 350 8.37E-121 T 22-04-2016 SRM_RS12300 f0adfe8bfa704f96f24cee7149f2a939 776 Gene3D G3DSA:2.60.40.1120 52 144 8.2E-12 T 22-04-2016 IPR014766 Carboxypeptidase, regulatory domain SRM_RS12300 f0adfe8bfa704f96f24cee7149f2a939 776 PANTHER PTHR30069 13 216 1.1E-15 T 22-04-2016 SRM_RS12300 f0adfe8bfa704f96f24cee7149f2a939 776 Gene3D G3DSA:2.170.130.10 145 220 1.9E-4 T 22-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 SRM_RS12300 f0adfe8bfa704f96f24cee7149f2a939 776 Pfam PF13620 Carboxypeptidase regulatory-like domain 52 131 7.6E-13 T 22-04-2016 SRM_RS12300 f0adfe8bfa704f96f24cee7149f2a939 776 Pfam PF07715 TonB-dependent Receptor Plug Domain 167 245 1.8E-6 T 22-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 SRM_RS12300 f0adfe8bfa704f96f24cee7149f2a939 776 Gene3D G3DSA:2.40.170.20 322 753 5.6E-15 T 22-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 SRM_RS12300 f0adfe8bfa704f96f24cee7149f2a939 776 SUPERFAMILY SSF56935 139 764 6.96E-41 T 22-04-2016 SRM_RS12300 f0adfe8bfa704f96f24cee7149f2a939 776 SUPERFAMILY SSF49464 52 146 5.69E-11 T 22-04-2016 IPR008969 Carboxypeptidase-like, regulatory domain SRM_RS11960 92d7bb9c20b2ae273aa65ccedda57019 788 Pfam PF00593 TonB dependent receptor 539 786 1.7E-21 T 22-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 SRM_RS11960 92d7bb9c20b2ae273aa65ccedda57019 788 Gene3D G3DSA:2.60.40.1120 29 109 2.9E-15 T 22-04-2016 IPR014766 Carboxypeptidase, regulatory domain SRM_RS11960 92d7bb9c20b2ae273aa65ccedda57019 788 SUPERFAMILY SSF56935 107 788 1.63E-81 T 22-04-2016 SRM_RS11960 92d7bb9c20b2ae273aa65ccedda57019 788 Gene3D G3DSA:2.40.170.20 230 788 7.8E-63 T 22-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 SRM_RS11960 92d7bb9c20b2ae273aa65ccedda57019 788 Gene3D G3DSA:2.170.130.10 110 228 1.9E-14 T 22-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 SRM_RS11960 92d7bb9c20b2ae273aa65ccedda57019 788 PANTHER PTHR32552 526 788 1.5E-35 T 22-04-2016 SRM_RS11960 92d7bb9c20b2ae273aa65ccedda57019 788 PANTHER PTHR32552 58 491 1.5E-35 T 22-04-2016 SRM_RS11960 92d7bb9c20b2ae273aa65ccedda57019 788 Pfam PF13620 Carboxypeptidase regulatory-like domain 29 109 1.4E-17 T 22-04-2016 SRM_RS11960 92d7bb9c20b2ae273aa65ccedda57019 788 SUPERFAMILY SSF49452 22 109 7.06E-14 T 22-04-2016 IPR013784 Carbohydrate-binding-like fold GO:0030246 SRM_RS11960 92d7bb9c20b2ae273aa65ccedda57019 788 ProSitePatterns PS01156 TonB-dependent receptor proteins signature 2. 771 788 - T 22-04-2016 IPR010917 TonB-dependent receptor, conserved site SRM_RS11960 92d7bb9c20b2ae273aa65ccedda57019 788 Pfam PF07715 TonB-dependent Receptor Plug Domain 128 227 2.9E-13 T 22-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 SRM_RS07540 6bf8935bfafb43b4e6a8978573fd1e61 398 Gene3D G3DSA:1.20.1250.20 210 393 6.2E-21 T 22-04-2016 SRM_RS07540 6bf8935bfafb43b4e6a8978573fd1e61 398 Gene3D G3DSA:1.20.1250.20 11 194 1.7E-25 T 22-04-2016 SRM_RS07540 6bf8935bfafb43b4e6a8978573fd1e61 398 PANTHER PTHR23501 9 398 3.8E-34 T 22-04-2016 SRM_RS07540 6bf8935bfafb43b4e6a8978573fd1e61 398 Pfam PF07690 Major Facilitator Superfamily 15 314 1.1E-37 T 22-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 SRM_RS07540 6bf8935bfafb43b4e6a8978573fd1e61 398 SUPERFAMILY SSF103473 4 389 6.02E-58 T 22-04-2016 IPR020846 Major facilitator superfamily domain SRM_RS09960 3610195e1f96e3871b5a604f0eaf122d 205 PRINTS PR01703 Manganese superoxide dismutase signature 27 40 3.0E-24 T 22-04-2016 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 SRM_RS09960 3610195e1f96e3871b5a604f0eaf122d 205 PRINTS PR01703 Manganese superoxide dismutase signature 73 86 3.0E-24 T 22-04-2016 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 SRM_RS09960 3610195e1f96e3871b5a604f0eaf122d 205 PRINTS PR01703 Manganese superoxide dismutase signature 6 17 3.0E-24 T 22-04-2016 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 SRM_RS09960 3610195e1f96e3871b5a604f0eaf122d 205 PRINTS PR01703 Manganese superoxide dismutase signature 126 134 3.0E-24 T 22-04-2016 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 SRM_RS09960 3610195e1f96e3871b5a604f0eaf122d 205 PRINTS PR01703 Manganese superoxide dismutase signature 163 175 3.0E-24 T 22-04-2016 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 SRM_RS09960 3610195e1f96e3871b5a604f0eaf122d 205 ProSitePatterns PS00088 Manganese and iron superoxide dismutases signature. 165 172 - T 22-04-2016 IPR019833 Manganese/iron superoxide dismutase, binding site GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 SRM_RS09960 3610195e1f96e3871b5a604f0eaf122d 205 Pfam PF02777 Iron/manganese superoxide dismutases, C-terminal domain 97 197 5.2E-40 T 22-04-2016 IPR019832 Manganese/iron superoxide dismutase, C-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 SRM_RS09960 3610195e1f96e3871b5a604f0eaf122d 205 SUPERFAMILY SSF46609 1 91 3.54E-35 T 22-04-2016 IPR019831 Manganese/iron superoxide dismutase, N-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 SRM_RS09960 3610195e1f96e3871b5a604f0eaf122d 205 Pfam PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain 3 90 1.3E-28 T 22-04-2016 IPR019831 Manganese/iron superoxide dismutase, N-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 SRM_RS09960 3610195e1f96e3871b5a604f0eaf122d 205 SUPERFAMILY SSF54719 89 201 1.44E-45 T 22-04-2016 IPR019832 Manganese/iron superoxide dismutase, C-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 SRM_RS09960 3610195e1f96e3871b5a604f0eaf122d 205 PIRSF PIRSF000349 1 205 1.5E-78 T 22-04-2016 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 SRM_RS09960 3610195e1f96e3871b5a604f0eaf122d 205 Gene3D G3DSA:1.10.287.990 20 90 1.9E-27 T 22-04-2016 SRM_RS09960 3610195e1f96e3871b5a604f0eaf122d 205 PANTHER PTHR11404 1 205 5.8E-96 T 22-04-2016 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 SRM_RS10940 c1212d349a776e2478a06d69fae33f02 284 TIGRFAM TIGR00078 nadC: nicotinate-nucleotide diphosphorylase (carboxylating) 28 283 3.1E-93 T 22-04-2016 IPR004393 Nicotinate-nucleotide pyrophosphorylase GO:0004514|GO:0019363 KEGG: 00760+2.4.2.19|MetaCyc: PWY-5316|MetaCyc: PWY-5653|MetaCyc: PWY-7342|UniPathway: UPA00253 SRM_RS10940 c1212d349a776e2478a06d69fae33f02 284 PIRSF PIRSF006250 4 284 3.0E-88 T 22-04-2016 IPR027277 Nicotinate-nucleotide pyrophosphorylase/Putative pyrophosphorylase ModD SRM_RS10940 c1212d349a776e2478a06d69fae33f02 284 Pfam PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain 117 282 2.1E-60 T 22-04-2016 IPR002638 Quinolinate phosphoribosyl transferase, C-terminal GO:0004514|GO:0009435 KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381|Reactome: REACT_11193|UniPathway: UPA00253 SRM_RS10940 c1212d349a776e2478a06d69fae33f02 284 Gene3D G3DSA:3.20.20.70 138 273 1.5E-61 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 SRM_RS10940 c1212d349a776e2478a06d69fae33f02 284 Gene3D G3DSA:3.90.1170.20 6 137 6.7E-41 T 22-04-2016 IPR022412 Quinolinate phosphoribosyl transferase, N-terminal GO:0016763 SRM_RS10940 c1212d349a776e2478a06d69fae33f02 284 Pfam PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain 28 115 1.3E-22 T 22-04-2016 IPR022412 Quinolinate phosphoribosyl transferase, N-terminal GO:0016763 SRM_RS10940 c1212d349a776e2478a06d69fae33f02 284 SUPERFAMILY SSF51690 117 283 1.14E-58 T 22-04-2016 IPR002638 Quinolinate phosphoribosyl transferase, C-terminal GO:0004514|GO:0009435 KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381|Reactome: REACT_11193|UniPathway: UPA00253 SRM_RS10940 c1212d349a776e2478a06d69fae33f02 284 SUPERFAMILY SSF54675 28 116 1.49E-23 T 22-04-2016 SRM_RS10940 c1212d349a776e2478a06d69fae33f02 284 PANTHER PTHR32179 30 283 2.1E-114 T 22-04-2016 SRM_RS04290 913da96d369b3662901026f2616cbf78 685 SUPERFAMILY SSF47823 382 482 2.55E-24 T 22-04-2016 IPR010998 Integrase, Lambda-type, N-terminal SRM_RS04290 913da96d369b3662901026f2616cbf78 685 Gene3D G3DSA:1.10.443.10 503 671 1.5E-29 T 22-04-2016 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 SRM_RS04290 913da96d369b3662901026f2616cbf78 685 SUPERFAMILY SSF56349 499 683 6.47E-24 T 22-04-2016 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 SRM_RS04290 913da96d369b3662901026f2616cbf78 685 Gene3D G3DSA:1.10.150.130 387 482 3.3E-23 T 22-04-2016 IPR023109 Integrase/recombinase, N-terminal SRM_RS04290 913da96d369b3662901026f2616cbf78 685 Pfam PF02899 Phage integrase, N-terminal SAM-like domain 391 461 9.2E-9 T 22-04-2016 IPR004107 Integrase, SAM-like, N-terminal GO:0003677|GO:0015074 SRM_RS04290 913da96d369b3662901026f2616cbf78 685 PANTHER PTHR30349 393 684 6.3E-15 T 22-04-2016 SRM_RS04290 913da96d369b3662901026f2616cbf78 685 PANTHER PTHR30349:SF34 393 684 6.3E-15 T 22-04-2016 SRM_RS10650 33eeb9c2dfc086171dc5e70f9989e80d 475 TIGRFAM TIGR01072 murA: UDP-N-acetylglucosamine 1-carboxyvinyltransferase 37 458 2.0E-148 T 22-04-2016 IPR005750 UDP-N-acetylglucosamine 1-carboxyvinyltransferase GO:0008760|GO:0019277 KEGG: 00520+2.5.1.7|KEGG: 00550+2.5.1.7|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 SRM_RS10650 33eeb9c2dfc086171dc5e70f9989e80d 475 PANTHER PTHR21090 37 458 2.3E-142 T 22-04-2016 SRM_RS10650 33eeb9c2dfc086171dc5e70f9989e80d 475 SUPERFAMILY SSF55205 37 459 8.18E-117 T 22-04-2016 IPR013792 RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta GO:0003824 SRM_RS10650 33eeb9c2dfc086171dc5e70f9989e80d 475 Hamap MF_00111 UDP-N-acetylglucosamine 1-carboxyvinyltransferase [murA]. 37 459 38.459 T 22-04-2016 IPR005750 UDP-N-acetylglucosamine 1-carboxyvinyltransferase GO:0008760|GO:0019277 KEGG: 00520+2.5.1.7|KEGG: 00550+2.5.1.7|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 SRM_RS10650 33eeb9c2dfc086171dc5e70f9989e80d 475 Pfam PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) 43 449 1.1E-79 T 22-04-2016 IPR001986 Enolpyruvate transferase domain GO:0016765 SRM_RS10650 33eeb9c2dfc086171dc5e70f9989e80d 475 Gene3D G3DSA:3.65.10.10 260 459 1.5E-46 T 22-04-2016 IPR001986 Enolpyruvate transferase domain GO:0016765 SRM_RS10650 33eeb9c2dfc086171dc5e70f9989e80d 475 PANTHER PTHR21090:SF19 37 458 2.3E-142 T 22-04-2016 SRM_RS10650 33eeb9c2dfc086171dc5e70f9989e80d 475 Gene3D G3DSA:3.65.10.10 57 259 1.5E-58 T 22-04-2016 IPR001986 Enolpyruvate transferase domain GO:0016765 SRM_RS14140 118752ddc829b3f4e44229646a7aba72 490 SUPERFAMILY SSF64586 418 490 8.44E-15 T 22-04-2016 IPR017449 Prolyl-tRNA synthetase, class II GO:0000166|GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 SRM_RS14140 118752ddc829b3f4e44229646a7aba72 490 Gene3D G3DSA:3.30.110.30 417 489 2.7E-23 T 22-04-2016 IPR016061 Proline-tRNA ligase, class II, C-terminal GO:0000166|GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 SRM_RS14140 118752ddc829b3f4e44229646a7aba72 490 Pfam PF00587 tRNA synthetase class II core domain (G, H, P, S and T) 111 278 1.7E-17 T 22-04-2016 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 SRM_RS14140 118752ddc829b3f4e44229646a7aba72 490 Gene3D G3DSA:3.40.50.800 294 412 2.3E-39 T 22-04-2016 IPR004154 Anticodon-binding SRM_RS14140 118752ddc829b3f4e44229646a7aba72 490 PANTHER PTHR11451 1 463 3.5E-228 T 22-04-2016 SRM_RS14140 118752ddc829b3f4e44229646a7aba72 490 Pfam PF09180 Prolyl-tRNA synthetase, C-terminal 423 490 3.1E-17 T 22-04-2016 IPR016061 Proline-tRNA ligase, class II, C-terminal GO:0000166|GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 SRM_RS14140 118752ddc829b3f4e44229646a7aba72 490 Hamap MF_01571 Proline--tRNA ligase [proS]. 5 490 43.406 T 22-04-2016 IPR004499 Proline-tRNA ligase, class IIa, archaeal-type GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 SRM_RS14140 118752ddc829b3f4e44229646a7aba72 490 PANTHER PTHR11451:SF6 1 463 3.5E-228 T 22-04-2016 IPR004499 Proline-tRNA ligase, class IIa, archaeal-type GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 SRM_RS14140 118752ddc829b3f4e44229646a7aba72 490 Pfam PF03129 Anticodon binding domain 300 395 4.1E-18 T 22-04-2016 IPR004154 Anticodon-binding SRM_RS14140 118752ddc829b3f4e44229646a7aba72 490 SUPERFAMILY SSF55681 10 287 8.38E-73 T 22-04-2016 SRM_RS14140 118752ddc829b3f4e44229646a7aba72 490 SUPERFAMILY SSF52954 289 412 2.27E-32 T 22-04-2016 IPR004154 Anticodon-binding SRM_RS14140 118752ddc829b3f4e44229646a7aba72 490 TIGRFAM TIGR00408 proS_fam_I: proline--tRNA ligase 7 490 1.7E-158 T 22-04-2016 IPR004499 Proline-tRNA ligase, class IIa, archaeal-type GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 SRM_RS14140 118752ddc829b3f4e44229646a7aba72 490 SMART SM00946 423 490 9.6E-25 T 22-04-2016 IPR016061 Proline-tRNA ligase, class II, C-terminal GO:0000166|GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 SRM_RS14140 118752ddc829b3f4e44229646a7aba72 490 Gene3D G3DSA:3.30.930.10 5 293 1.2E-107 T 22-04-2016 SRM_RS12720 b893d9c237b88e9c0aa61d27138c90ec 733 PANTHER PTHR11827 14 651 1.2E-195 T 22-04-2016 SRM_RS12720 b893d9c237b88e9c0aa61d27138c90ec 733 Pfam PF00324 Amino acid permease 20 430 1.9E-44 T 22-04-2016 IPR004841 Amino acid permease/ SLC12A domain GO:0006810|GO:0016020|GO:0055085 SRM_RS12720 b893d9c237b88e9c0aa61d27138c90ec 733 PANTHER PTHR11827:SF67 14 651 1.2E-195 T 22-04-2016 SRM_RS00905 ebf1d684ef9f4cfd98a0efaf47b6b290 276 Hamap MF_00050 Elongation factor Ts [tsf]. 1 276 65.466 T 22-04-2016 IPR001816 Translation elongation factor EFTs/EF1B GO:0003746|GO:0005622|GO:0006414 SRM_RS00905 ebf1d684ef9f4cfd98a0efaf47b6b290 276 ProSitePatterns PS01126 Elongation factor Ts signature 1. 11 26 - T 22-04-2016 IPR018101 Translation elongation factor Ts, conserved site GO:0003746|GO:0005622|GO:0006414 SRM_RS00905 ebf1d684ef9f4cfd98a0efaf47b6b290 276 Pfam PF00889 Elongation factor TS 72 275 1.7E-68 T 22-04-2016 IPR014039 Translation elongation factor EFTs/EF1B, dimerisation GO:0003746|GO:0005622|GO:0006414 SRM_RS00905 ebf1d684ef9f4cfd98a0efaf47b6b290 276 Gene3D G3DSA:1.10.286.20 196 239 2.4E-15 T 22-04-2016 SRM_RS00905 ebf1d684ef9f4cfd98a0efaf47b6b290 276 SUPERFAMILY SSF46934 1 52 4.68E-16 T 22-04-2016 IPR009060 UBA-like GO:0005515 SRM_RS00905 ebf1d684ef9f4cfd98a0efaf47b6b290 276 Gene3D G3DSA:3.30.479.20 153 191 6.9E-22 T 22-04-2016 IPR014039 Translation elongation factor EFTs/EF1B, dimerisation GO:0003746|GO:0005622|GO:0006414 SRM_RS00905 ebf1d684ef9f4cfd98a0efaf47b6b290 276 Gene3D G3DSA:3.30.479.20 240 275 6.9E-22 T 22-04-2016 IPR014039 Translation elongation factor EFTs/EF1B, dimerisation GO:0003746|GO:0005622|GO:0006414 SRM_RS00905 ebf1d684ef9f4cfd98a0efaf47b6b290 276 ProSitePatterns PS01127 Elongation factor Ts signature 2. 76 86 - T 22-04-2016 IPR018101 Translation elongation factor Ts, conserved site GO:0003746|GO:0005622|GO:0006414 SRM_RS00905 ebf1d684ef9f4cfd98a0efaf47b6b290 276 TIGRFAM TIGR00116 tsf: translation elongation factor Ts 1 275 2.9E-83 T 22-04-2016 IPR001816 Translation elongation factor EFTs/EF1B GO:0003746|GO:0005622|GO:0006414 SRM_RS00905 ebf1d684ef9f4cfd98a0efaf47b6b290 276 Gene3D G3DSA:1.10.8.10 1 52 8.9E-23 T 22-04-2016 SRM_RS00905 ebf1d684ef9f4cfd98a0efaf47b6b290 276 SUPERFAMILY SSF54713 56 147 4.06E-20 T 22-04-2016 IPR014039 Translation elongation factor EFTs/EF1B, dimerisation GO:0003746|GO:0005622|GO:0006414 SRM_RS00905 ebf1d684ef9f4cfd98a0efaf47b6b290 276 Gene3D G3DSA:3.30.479.20 56 147 5.6E-19 T 22-04-2016 IPR014039 Translation elongation factor EFTs/EF1B, dimerisation GO:0003746|GO:0005622|GO:0006414 SRM_RS00905 ebf1d684ef9f4cfd98a0efaf47b6b290 276 SUPERFAMILY SSF54713 152 276 1.26E-39 T 22-04-2016 IPR014039 Translation elongation factor EFTs/EF1B, dimerisation GO:0003746|GO:0005622|GO:0006414 SRM_RS00905 ebf1d684ef9f4cfd98a0efaf47b6b290 276 PANTHER PTHR11741 1 275 2.2E-101 T 22-04-2016 IPR001816 Translation elongation factor EFTs/EF1B GO:0003746|GO:0005622|GO:0006414 SRM_RS03520 f00d4874ad6f3f2a3b3ef52f56989cd4 511 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 244 394 1.5E-25 T 22-04-2016 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 SRM_RS03520 f00d4874ad6f3f2a3b3ef52f56989cd4 511 SUPERFAMILY SSF47203 245 395 2.58E-29 T 22-04-2016 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 SRM_RS03520 f00d4874ad6f3f2a3b3ef52f56989cd4 511 Gene3D G3DSA:1.10.540.10 34 117 4.1E-7 T 22-04-2016 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 SRM_RS03520 f00d4874ad6f3f2a3b3ef52f56989cd4 511 SUPERFAMILY SSF56645 16 239 3.27E-29 T 22-04-2016 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain GO:0008152|GO:0016627|GO:0055114 SRM_RS03520 f00d4874ad6f3f2a3b3ef52f56989cd4 511 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 41 117 5.9E-5 T 22-04-2016 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 SRM_RS03520 f00d4874ad6f3f2a3b3ef52f56989cd4 511 Gene3D G3DSA:2.40.110.10 132 234 4.0E-14 T 22-04-2016 SRM_RS03520 f00d4874ad6f3f2a3b3ef52f56989cd4 511 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 132 225 3.6E-13 T 22-04-2016 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0003995|GO:0055114 SRM_RS03520 f00d4874ad6f3f2a3b3ef52f56989cd4 511 Gene3D G3DSA:1.20.140.10 235 402 1.4E-32 T 22-04-2016 SRM_RS03520 f00d4874ad6f3f2a3b3ef52f56989cd4 511 ProSitePatterns PS00073 Acyl-CoA dehydrogenases signature 2. 353 372 - T 22-04-2016 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 SRM_RS03520 f00d4874ad6f3f2a3b3ef52f56989cd4 511 PANTHER PTHR10909 61 410 4.8E-49 T 22-04-2016 SRM_RS12675 5bfeb91c3688ac48bcd890211617b1d3 467 Gene3D G3DSA:2.30.180.10 67 196 2.4E-32 T 22-04-2016 IPR000782 FAS1 domain SRM_RS12675 5bfeb91c3688ac48bcd890211617b1d3 467 Pfam PF02469 Fasciclin domain 77 196 2.9E-25 T 22-04-2016 IPR000782 FAS1 domain SRM_RS12675 5bfeb91c3688ac48bcd890211617b1d3 467 SUPERFAMILY SSF49329 216 323 7.75E-10 T 22-04-2016 IPR001424 Superoxide dismutase, copper/zinc binding domain GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 SRM_RS12675 5bfeb91c3688ac48bcd890211617b1d3 467 SUPERFAMILY SSF82153 54 197 2.88E-31 T 22-04-2016 IPR000782 FAS1 domain SRM_RS12675 5bfeb91c3688ac48bcd890211617b1d3 467 PANTHER PTHR10900 67 200 4.5E-31 T 22-04-2016 SRM_RS12675 5bfeb91c3688ac48bcd890211617b1d3 467 SMART SM00554 102 197 1.6E-24 T 22-04-2016 IPR000782 FAS1 domain SRM_RS04910 4ce7e2fc689ba1742480bcc438cfbdb9 173 Pfam PF01451 Low molecular weight phosphotyrosine protein phosphatase 7 152 2.9E-39 T 22-04-2016 IPR023485 Phosphotyrosine protein phosphatase I superfamily SRM_RS04910 4ce7e2fc689ba1742480bcc438cfbdb9 173 SMART SM00226 5 155 2.3E-45 T 22-04-2016 IPR023485 Phosphotyrosine protein phosphatase I superfamily SRM_RS04910 4ce7e2fc689ba1742480bcc438cfbdb9 173 PRINTS PR00719 LMW phosphotyrosine protein phosphatase signature 84 99 1.5E-23 T 22-04-2016 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 SRM_RS04910 4ce7e2fc689ba1742480bcc438cfbdb9 173 PRINTS PR00719 LMW phosphotyrosine protein phosphatase signature 127 142 1.5E-23 T 22-04-2016 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 SRM_RS04910 4ce7e2fc689ba1742480bcc438cfbdb9 173 PRINTS PR00719 LMW phosphotyrosine protein phosphatase signature 50 66 1.5E-23 T 22-04-2016 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 SRM_RS04910 4ce7e2fc689ba1742480bcc438cfbdb9 173 PRINTS PR00719 LMW phosphotyrosine protein phosphatase signature 108 121 1.5E-23 T 22-04-2016 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 SRM_RS04910 4ce7e2fc689ba1742480bcc438cfbdb9 173 PRINTS PR00719 LMW phosphotyrosine protein phosphatase signature 7 24 1.5E-23 T 22-04-2016 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 SRM_RS04910 4ce7e2fc689ba1742480bcc438cfbdb9 173 PANTHER PTHR11717:SF7 1 172 1.1E-54 T 22-04-2016 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 SRM_RS04910 4ce7e2fc689ba1742480bcc438cfbdb9 173 PANTHER PTHR11717 1 172 1.1E-54 T 22-04-2016 SRM_RS04910 4ce7e2fc689ba1742480bcc438cfbdb9 173 SUPERFAMILY SSF52788 2 156 5.1E-46 T 22-04-2016 IPR023485 Phosphotyrosine protein phosphatase I superfamily SRM_RS04910 4ce7e2fc689ba1742480bcc438cfbdb9 173 Gene3D G3DSA:3.40.50.270 2 156 4.1E-51 T 22-04-2016 SRM_RS06155 ea9a2be3c21f7851b76d14dd26a2e9ed 153 Pfam PF04434 SWIM zinc finger 55 90 2.0E-5 T 22-04-2016 IPR007527 Zinc finger, SWIM-type GO:0008270 SRM_RS07975 4a5b6f228563179197f7227eec0b99c7 455 Gene3D G3DSA:3.40.309.10 241 427 1.1E-60 T 22-04-2016 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0008152|GO:0016491|GO:0016620|GO:0055114 SRM_RS07975 4a5b6f228563179197f7227eec0b99c7 455 Pfam PF00171 Aldehyde dehydrogenase family 5 451 1.0E-134 T 22-04-2016 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 SRM_RS07975 4a5b6f228563179197f7227eec0b99c7 455 PANTHER PTHR11699 5 455 1.5E-242 T 22-04-2016 SRM_RS07975 4a5b6f228563179197f7227eec0b99c7 455 Gene3D G3DSA:3.40.605.10 5 240 7.1E-68 T 22-04-2016 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 SRM_RS07975 4a5b6f228563179197f7227eec0b99c7 455 PANTHER PTHR11699:SF28 5 455 1.5E-242 T 22-04-2016 SRM_RS07975 4a5b6f228563179197f7227eec0b99c7 455 SUPERFAMILY SSF53720 5 453 3.4E-139 T 22-04-2016 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 SRM_RS06310 2415f6f7760adc02b9a7baa4ee5d8f6d 330 SUPERFAMILY SSF52540 276 313 1.19E-57 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SRM_RS06310 2415f6f7760adc02b9a7baa4ee5d8f6d 330 SUPERFAMILY SSF52540 7 243 1.19E-57 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SRM_RS06310 2415f6f7760adc02b9a7baa4ee5d8f6d 330 Pfam PF13469 Sulfotransferase family 13 210 1.8E-15 T 22-04-2016 SRM_RS06310 2415f6f7760adc02b9a7baa4ee5d8f6d 330 PANTHER PTHR10605:SF40 11 53 7.8E-26 T 22-04-2016 SRM_RS06310 2415f6f7760adc02b9a7baa4ee5d8f6d 330 PANTHER PTHR10605:SF40 73 214 7.8E-26 T 22-04-2016 SRM_RS06310 2415f6f7760adc02b9a7baa4ee5d8f6d 330 PANTHER PTHR10605 11 53 7.8E-26 T 22-04-2016 SRM_RS06310 2415f6f7760adc02b9a7baa4ee5d8f6d 330 PANTHER PTHR10605 73 214 7.8E-26 T 22-04-2016 SRM_RS06310 2415f6f7760adc02b9a7baa4ee5d8f6d 330 Gene3D G3DSA:3.40.50.300 8 314 1.1E-63 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SRM_RS14020 b8d4cfd436506254fbab33467237eab5 293 Pfam PF08668 HDOD domain 32 221 5.6E-31 T 22-04-2016 IPR013976 Metal-dependent hydrolase HDOD SRM_RS14020 b8d4cfd436506254fbab33467237eab5 293 PANTHER PTHR33525 9 221 2.0E-26 T 22-04-2016 SRM_RS14020 b8d4cfd436506254fbab33467237eab5 293 SUPERFAMILY SSF109604 30 261 5.02E-39 T 22-04-2016 SRM_RS14020 b8d4cfd436506254fbab33467237eab5 293 PANTHER PTHR33525:SF3 9 221 2.0E-26 T 22-04-2016 SRM_RS14020 b8d4cfd436506254fbab33467237eab5 293 Gene3D G3DSA:1.10.3150.10 30 255 2.3E-41 T 22-04-2016 IPR013976 Metal-dependent hydrolase HDOD SRM_RS02680 22262a41ed62bd319c11b47df9f170ca 462 PANTHER PTHR11098:SF1 12 456 3.9E-146 T 22-04-2016 SRM_RS02680 22262a41ed62bd319c11b47df9f170ca 462 Gene3D G3DSA:3.20.140.10 10 382 1.1E-107 T 22-04-2016 SRM_RS02680 22262a41ed62bd319c11b47df9f170ca 462 SUPERFAMILY SSF54675 10 139 3.36E-43 T 22-04-2016 SRM_RS02680 22262a41ed62bd319c11b47df9f170ca 462 PANTHER PTHR11098 12 456 3.9E-146 T 22-04-2016 IPR007229 Nicotinate phosphoribosyltransferase family KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381|UniPathway: UPA00253 SRM_RS02680 22262a41ed62bd319c11b47df9f170ca 462 Pfam PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family 161 338 1.6E-9 T 22-04-2016 IPR007229 Nicotinate phosphoribosyltransferase family KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381|UniPathway: UPA00253 SRM_RS02680 22262a41ed62bd319c11b47df9f170ca 462 TIGRFAM TIGR01513 NAPRTase_put: nicotinate phosphoribosyltransferase 13 441 9.0E-148 T 22-04-2016 IPR006405 Nicotinate phosphoribosyltransferase pncB-type GO:0004516|GO:0019358 KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381|UniPathway: UPA00253 SRM_RS02680 22262a41ed62bd319c11b47df9f170ca 462 SUPERFAMILY SSF51690 141 448 1.15E-92 T 22-04-2016 IPR002638 Quinolinate phosphoribosyl transferase, C-terminal GO:0004514|GO:0009435 KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381|Reactome: REACT_11193|UniPathway: UPA00253 SRM_RS02680 22262a41ed62bd319c11b47df9f170ca 462 PIRSF PIRSF000484 5 455 1.9E-125 T 22-04-2016 IPR007229 Nicotinate phosphoribosyltransferase family KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381|UniPathway: UPA00253 SRM_RS07750 84e2eda1977f0b82618c70392f22c75d 667 Gene3D G3DSA:3.30.420.40 312 353 1.6E-35 T 22-04-2016 SRM_RS07750 84e2eda1977f0b82618c70392f22c75d 667 Gene3D G3DSA:3.30.420.40 190 222 1.6E-35 T 22-04-2016 SRM_RS07750 84e2eda1977f0b82618c70392f22c75d 667 Hamap MF_00332 Chaperone protein DnaK [dnaK]. 1 661 36.465 T 22-04-2016 IPR012725 Chaperone DnaK GO:0005524|GO:0006457|GO:0051082 SRM_RS07750 84e2eda1977f0b82618c70392f22c75d 667 Gene3D G3DSA:3.30.30.30 53 103 7.5E-21 T 22-04-2016 SRM_RS07750 84e2eda1977f0b82618c70392f22c75d 667 SUPERFAMILY SSF100920 377 531 2.09E-62 T 22-04-2016 IPR029047 Heat shock protein 70kD, peptide-binding domain SRM_RS07750 84e2eda1977f0b82618c70392f22c75d 667 Gene3D G3DSA:1.20.1270.10 526 599 3.8E-17 T 22-04-2016 IPR029048 Heat shock protein 70kD, C-terminal domain SRM_RS07750 84e2eda1977f0b82618c70392f22c75d 667 Pfam PF00012 Hsp70 protein 4 598 3.8E-256 T 22-04-2016 IPR013126 Heat shock protein 70 family SRM_RS07750 84e2eda1977f0b82618c70392f22c75d 667 PRINTS PR00301 70kDa heat shock protein signature 381 400 3.0E-75 T 22-04-2016 IPR013126 Heat shock protein 70 family SRM_RS07750 84e2eda1977f0b82618c70392f22c75d 667 PRINTS PR00301 70kDa heat shock protein signature 31 43 3.0E-75 T 22-04-2016 IPR013126 Heat shock protein 70 family SRM_RS07750 84e2eda1977f0b82618c70392f22c75d 667 PRINTS PR00301 70kDa heat shock protein signature 3 16 3.0E-75 T 22-04-2016 IPR013126 Heat shock protein 70 family SRM_RS07750 84e2eda1977f0b82618c70392f22c75d 667 PRINTS PR00301 70kDa heat shock protein signature 195 205 3.0E-75 T 22-04-2016 IPR013126 Heat shock protein 70 family SRM_RS07750 84e2eda1977f0b82618c70392f22c75d 667 PRINTS PR00301 70kDa heat shock protein signature 136 156 3.0E-75 T 22-04-2016 IPR013126 Heat shock protein 70 family SRM_RS07750 84e2eda1977f0b82618c70392f22c75d 667 PRINTS PR00301 70kDa heat shock protein signature 54 62 3.0E-75 T 22-04-2016 IPR013126 Heat shock protein 70 family SRM_RS07750 84e2eda1977f0b82618c70392f22c75d 667 PRINTS PR00301 70kDa heat shock protein signature 327 343 3.0E-75 T 22-04-2016 IPR013126 Heat shock protein 70 family SRM_RS07750 84e2eda1977f0b82618c70392f22c75d 667 PRINTS PR00301 70kDa heat shock protein signature 462 478 3.0E-75 T 22-04-2016 IPR013126 Heat shock protein 70 family SRM_RS07750 84e2eda1977f0b82618c70392f22c75d 667 PRINTS PR00301 70kDa heat shock protein signature 358 378 3.0E-75 T 22-04-2016 IPR013126 Heat shock protein 70 family SRM_RS07750 84e2eda1977f0b82618c70392f22c75d 667 TIGRFAM TIGR02350 prok_dnaK: chaperone protein DnaK 3 589 1.6E-287 T 22-04-2016 IPR012725 Chaperone DnaK GO:0005524|GO:0006457|GO:0051082 SRM_RS07750 84e2eda1977f0b82618c70392f22c75d 667 Gene3D G3DSA:3.30.420.40 117 189 4.0E-65 T 22-04-2016 SRM_RS07750 84e2eda1977f0b82618c70392f22c75d 667 Gene3D G3DSA:3.30.420.40 4 52 4.0E-65 T 22-04-2016 SRM_RS07750 84e2eda1977f0b82618c70392f22c75d 667 Gene3D G3DSA:2.60.34.10 383 525 5.0E-69 T 22-04-2016 IPR029047 Heat shock protein 70kD, peptide-binding domain SRM_RS07750 84e2eda1977f0b82618c70392f22c75d 667 PANTHER PTHR19375:SF173 645 667 0.0 T 22-04-2016 SRM_RS07750 84e2eda1977f0b82618c70392f22c75d 667 PANTHER PTHR19375:SF173 2 628 0.0 T 22-04-2016 SRM_RS07750 84e2eda1977f0b82618c70392f22c75d 667 ProSitePatterns PS00329 Heat shock hsp70 proteins family signature 2. 189 202 - T 22-04-2016 IPR018181 Heat shock protein 70, conserved site SRM_RS07750 84e2eda1977f0b82618c70392f22c75d 667 ProSitePatterns PS01036 Heat shock hsp70 proteins family signature 3. 330 344 - T 22-04-2016 IPR018181 Heat shock protein 70, conserved site SRM_RS07750 84e2eda1977f0b82618c70392f22c75d 667 SUPERFAMILY SSF100934 500 610 3.53E-12 T 22-04-2016 IPR029048 Heat shock protein 70kD, C-terminal domain SRM_RS07750 84e2eda1977f0b82618c70392f22c75d 667 ProSitePatterns PS00297 Heat shock hsp70 proteins family signature 1. 7 14 - T 22-04-2016 IPR018181 Heat shock protein 70, conserved site SRM_RS07750 84e2eda1977f0b82618c70392f22c75d 667 SUPERFAMILY SSF53067 4 180 9.71E-63 T 22-04-2016 SRM_RS07750 84e2eda1977f0b82618c70392f22c75d 667 SUPERFAMILY SSF53067 184 375 1.43E-65 T 22-04-2016 SRM_RS07750 84e2eda1977f0b82618c70392f22c75d 667 PANTHER PTHR19375 645 667 0.0 T 22-04-2016 SRM_RS07750 84e2eda1977f0b82618c70392f22c75d 667 PANTHER PTHR19375 2 628 0.0 T 22-04-2016 SRM_RS07750 84e2eda1977f0b82618c70392f22c75d 667 Gene3D G3DSA:3.90.640.10 223 308 1.1E-30 T 22-04-2016 SRM_RS11585 e49184e7238853aa2193800cd2969437 195 SUPERFAMILY SSF82153 54 189 2.75E-26 T 22-04-2016 IPR000782 FAS1 domain SRM_RS11585 e49184e7238853aa2193800cd2969437 195 Pfam PF02469 Fasciclin domain 68 187 4.2E-19 T 22-04-2016 IPR000782 FAS1 domain SRM_RS11585 e49184e7238853aa2193800cd2969437 195 PANTHER PTHR10900 42 187 3.3E-25 T 22-04-2016 SRM_RS11585 e49184e7238853aa2193800cd2969437 195 SMART SM00554 92 190 5.4E-12 T 22-04-2016 IPR000782 FAS1 domain SRM_RS11585 e49184e7238853aa2193800cd2969437 195 Gene3D G3DSA:2.30.180.10 58 187 3.8E-27 T 22-04-2016 IPR000782 FAS1 domain SRM_RS11200 e3376b4f32a81823a77788bd94160d94 150 PANTHER PTHR11241 1 149 6.7E-50 T 22-04-2016 SRM_RS11200 e3376b4f32a81823a77788bd94160d94 150 SUPERFAMILY SSF51283 2 149 2.49E-49 T 22-04-2016 IPR029054 dUTPase-like SRM_RS11200 e3376b4f32a81823a77788bd94160d94 150 Hamap MF_00116 Deoxyuridine 5'-triphosphate nucleotidohydrolase [dut]. 2 149 33.633 T 22-04-2016 IPR008181 Deoxyuridine triphosphate nucleotidohydrolase GO:0004170|GO:0046080 KEGG: 00240+3.6.1.23|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7206|UniPathway: UPA00610 SRM_RS11200 e3376b4f32a81823a77788bd94160d94 150 TIGRFAM TIGR00576 dut: dUTP diphosphatase 8 148 4.5E-53 T 22-04-2016 IPR008181 Deoxyuridine triphosphate nucleotidohydrolase GO:0004170|GO:0046080 KEGG: 00240+3.6.1.23|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7206|UniPathway: UPA00610 SRM_RS11200 e3376b4f32a81823a77788bd94160d94 150 Gene3D G3DSA:2.70.40.10 5 149 3.3E-52 T 22-04-2016 IPR029054 dUTPase-like SRM_RS11200 e3376b4f32a81823a77788bd94160d94 150 Pfam PF00692 dUTPase 17 148 4.0E-30 T 22-04-2016 IPR008180 Deoxyuridine triphosphate nucleotidohydrolase/Deoxycytidine triphosphate deaminase GO:0016787|GO:0046080 SRM_RS15325 984a947cb021f8336f8aa580e08946c7 174 SUPERFAMILY SSF69118 12 172 2.49E-32 T 22-04-2016 IPR029032 AhpD-like SRM_RS15325 984a947cb021f8336f8aa580e08946c7 174 Gene3D G3DSA:1.20.1290.10 10 89 6.0E-24 T 22-04-2016 IPR029032 AhpD-like SRM_RS15325 984a947cb021f8336f8aa580e08946c7 174 Gene3D G3DSA:1.20.1290.10 139 173 6.0E-24 T 22-04-2016 IPR029032 AhpD-like SRM_RS15325 984a947cb021f8336f8aa580e08946c7 174 PANTHER PTHR35446 10 173 1.9E-15 T 22-04-2016 SRM_RS15325 984a947cb021f8336f8aa580e08946c7 174 TIGRFAM TIGR00778 ahpD_dom: alkylhydroperoxidase AhpD family core domain 54 95 4.2E-8 T 22-04-2016 IPR004675 Alkylhydroperoxidase AhpD core GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 SRM_RS15325 984a947cb021f8336f8aa580e08946c7 174 Pfam PF02627 Carboxymuconolactone decarboxylase family 45 102 1.8E-8 T 22-04-2016 IPR003779 Carboxymuconolactone decarboxylase-like GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 SRM_RS12250 3bc9100b724be0020d712dde3b3266ba 599 SMART SM00382 380 566 6.4E-11 T 22-04-2016 IPR003593 AAA+ ATPase domain SRM_RS12250 3bc9100b724be0020d712dde3b3266ba 599 SUPERFAMILY SSF90123 6 339 5.49E-72 T 22-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 SRM_RS12250 3bc9100b724be0020d712dde3b3266ba 599 Gene3D G3DSA:3.40.50.300 353 584 1.4E-75 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SRM_RS12250 3bc9100b724be0020d712dde3b3266ba 599 SUPERFAMILY SSF52540 345 591 5.43E-83 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SRM_RS12250 3bc9100b724be0020d712dde3b3266ba 599 Gene3D G3DSA:1.20.1560.10 6 335 1.3E-70 T 22-04-2016 SRM_RS12250 3bc9100b724be0020d712dde3b3266ba 599 PANTHER PTHR24221 66 599 2.0E-196 T 22-04-2016 SRM_RS12250 3bc9100b724be0020d712dde3b3266ba 599 PANTHER PTHR24221 3 48 2.0E-196 T 22-04-2016 SRM_RS12250 3bc9100b724be0020d712dde3b3266ba 599 Pfam PF00005 ABC transporter 371 519 9.1E-32 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 SRM_RS12250 3bc9100b724be0020d712dde3b3266ba 599 Pfam PF00664 ABC transporter transmembrane region 21 307 1.6E-45 T 22-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 SRM_RS02820 81f78d9705b7604d5ef40693d22f49f7 536 Gene3D G3DSA:3.40.50.1820 78 486 7.4E-49 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold SRM_RS02820 81f78d9705b7604d5ef40693d22f49f7 536 Pfam PF00450 Serine carboxypeptidase 101 248 3.5E-9 T 22-04-2016 IPR001563 Peptidase S10, serine carboxypeptidase GO:0004185|GO:0006508 SRM_RS02820 81f78d9705b7604d5ef40693d22f49f7 536 SUPERFAMILY SSF53474 72 505 6.12E-73 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold SRM_RS00785 122136a706577dc1b1499a7c3808659d 111 PANTHER PTHR33909 4 111 1.6E-29 T 22-04-2016 SRM_RS00785 122136a706577dc1b1499a7c3808659d 111 SMART SM01323 24 107 2.4E-37 T 22-04-2016 IPR003849 Preprotein translocase YajC SRM_RS00785 122136a706577dc1b1499a7c3808659d 111 PANTHER PTHR33909:SF1 4 111 1.6E-29 T 22-04-2016 SRM_RS00785 122136a706577dc1b1499a7c3808659d 111 TIGRFAM TIGR00739 yajC: preprotein translocase, YajC subunit 26 105 6.9E-28 T 22-04-2016 IPR003849 Preprotein translocase YajC SRM_RS00785 122136a706577dc1b1499a7c3808659d 111 PRINTS PR01853 Bacterial YajC preprotein translocase signature 26 46 1.3E-14 T 22-04-2016 IPR003849 Preprotein translocase YajC SRM_RS00785 122136a706577dc1b1499a7c3808659d 111 PRINTS PR01853 Bacterial YajC preprotein translocase signature 64 82 1.3E-14 T 22-04-2016 IPR003849 Preprotein translocase YajC SRM_RS00785 122136a706577dc1b1499a7c3808659d 111 Pfam PF02699 Preprotein translocase subunit 29 104 1.2E-29 T 22-04-2016 IPR003849 Preprotein translocase YajC SRM_RS10090 546baec7180769b05c5bf472c666f167 522 SUPERFAMILY SSF56601 51 519 1.73E-86 T 22-04-2016 IPR012338 Beta-lactamase/transpeptidase-like SRM_RS10090 546baec7180769b05c5bf472c666f167 522 Pfam PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family 61 518 2.3E-99 T 22-04-2016 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 SRM_RS10090 546baec7180769b05c5bf472c666f167 522 PANTHER PTHR30023 10 521 4.0E-94 T 22-04-2016 SRM_RS10090 546baec7180769b05c5bf472c666f167 522 TIGRFAM TIGR00666 PBP4: D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase 77 497 3.5E-85 T 22-04-2016 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 SRM_RS10090 546baec7180769b05c5bf472c666f167 522 PANTHER PTHR30023:SF0 10 521 4.0E-94 T 22-04-2016 SRM_RS10090 546baec7180769b05c5bf472c666f167 522 Gene3D G3DSA:3.40.710.10 70 131 1.1E-8 T 22-04-2016 IPR012338 Beta-lactamase/transpeptidase-like SRM_RS10090 546baec7180769b05c5bf472c666f167 522 Gene3D G3DSA:3.40.710.10 280 520 1.9E-65 T 22-04-2016 IPR012338 Beta-lactamase/transpeptidase-like SRM_RS10090 546baec7180769b05c5bf472c666f167 522 PRINTS PR00922 D-Ala-D-Ala carboxypeptidase 3 (S13) family signature 475 488 3.8E-23 T 22-04-2016 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 SRM_RS10090 546baec7180769b05c5bf472c666f167 522 PRINTS PR00922 D-Ala-D-Ala carboxypeptidase 3 (S13) family signature 394 408 3.8E-23 T 22-04-2016 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 SRM_RS10090 546baec7180769b05c5bf472c666f167 522 PRINTS PR00922 D-Ala-D-Ala carboxypeptidase 3 (S13) family signature 89 108 3.8E-23 T 22-04-2016 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 SRM_RS10090 546baec7180769b05c5bf472c666f167 522 PRINTS PR00922 D-Ala-D-Ala carboxypeptidase 3 (S13) family signature 409 423 3.8E-23 T 22-04-2016 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 SRM_RS11030 60d80e1ce67ac6bee551b57b6aebdf31 427 TIGRFAM TIGR02091 glgC: glucose-1-phosphate adenylyltransferase 10 393 6.6E-131 T 22-04-2016 IPR011831 Glucose-1-phosphate adenylyltransferase GO:0005978|GO:0008878 KEGG: 00500+2.7.7.27|KEGG: 00520+2.7.7.27|MetaCyc: PWY-622|UniPathway: UPA00164 SRM_RS11030 60d80e1ce67ac6bee551b57b6aebdf31 427 SUPERFAMILY SSF53448 374 390 4.93E-77 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases SRM_RS11030 60d80e1ce67ac6bee551b57b6aebdf31 427 SUPERFAMILY SSF53448 9 277 4.93E-77 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases SRM_RS11030 60d80e1ce67ac6bee551b57b6aebdf31 427 ProSitePatterns PS00810 ADP-glucose pyrophosphorylase signature 3. 209 219 - T 22-04-2016 IPR005836 ADP-glucose pyrophosphorylase, conserved site GO:0005978|GO:0008878 KEGG: 00500+2.7.7.27|KEGG: 00520+2.7.7.27|MetaCyc: PWY-622|UniPathway: UPA00164 SRM_RS11030 60d80e1ce67ac6bee551b57b6aebdf31 427 ProSitePatterns PS00809 ADP-glucose pyrophosphorylase signature 2. 101 109 - T 22-04-2016 IPR005836 ADP-glucose pyrophosphorylase, conserved site GO:0005978|GO:0008878 KEGG: 00500+2.7.7.27|KEGG: 00520+2.7.7.27|MetaCyc: PWY-622|UniPathway: UPA00164 SRM_RS11030 60d80e1ce67ac6bee551b57b6aebdf31 427 Gene3D G3DSA:2.160.10.10 378 427 9.0E-4 T 22-04-2016 SRM_RS11030 60d80e1ce67ac6bee551b57b6aebdf31 427 Pfam PF00483 Nucleotidyl transferase 11 273 2.0E-63 T 22-04-2016 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 Reactome: REACT_17015 SRM_RS11030 60d80e1ce67ac6bee551b57b6aebdf31 427 ProSitePatterns PS00808 ADP-glucose pyrophosphorylase signature 1. 15 34 - T 22-04-2016 IPR005836 ADP-glucose pyrophosphorylase, conserved site GO:0005978|GO:0008878 KEGG: 00500+2.7.7.27|KEGG: 00520+2.7.7.27|MetaCyc: PWY-622|UniPathway: UPA00164 SRM_RS11030 60d80e1ce67ac6bee551b57b6aebdf31 427 Gene3D G3DSA:3.90.550.10 11 345 1.2E-72 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases SRM_RS11030 60d80e1ce67ac6bee551b57b6aebdf31 427 SUPERFAMILY SSF51161 291 427 8.39E-22 T 22-04-2016 IPR011004 Trimeric LpxA-like SRM_RS06960 db5331092fc9da036840e6ae1f66545c 273 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 27 44 5.71E-26 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SRM_RS06960 db5331092fc9da036840e6ae1f66545c 273 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 200 217 5.71E-26 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SRM_RS06960 db5331092fc9da036840e6ae1f66545c 273 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 153 169 5.71E-26 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SRM_RS06960 db5331092fc9da036840e6ae1f66545c 273 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 179 198 5.71E-26 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SRM_RS06960 db5331092fc9da036840e6ae1f66545c 273 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 234 254 5.71E-26 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SRM_RS06960 db5331092fc9da036840e6ae1f66545c 273 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 166 194 - T 22-04-2016 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 SRM_RS06960 db5331092fc9da036840e6ae1f66545c 273 Gene3D G3DSA:3.40.50.720 21 272 2.3E-68 T 22-04-2016 IPR016040 NAD(P)-binding domain SRM_RS06960 db5331092fc9da036840e6ae1f66545c 273 PANTHER PTHR24322 30 210 3.1E-32 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SRM_RS06960 db5331092fc9da036840e6ae1f66545c 273 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 32 270 4.8E-53 T 22-04-2016 SRM_RS06960 db5331092fc9da036840e6ae1f66545c 273 SUPERFAMILY SSF51735 25 272 1.65E-66 T 22-04-2016 IPR016040 NAD(P)-binding domain SRM_RS15305 d33d044ce540921159d8e18f327d2b27 252 PANTHER PTHR10204:SF48 20 193 5.7E-16 T 22-04-2016 SRM_RS15305 d33d044ce540921159d8e18f327d2b27 252 Gene3D G3DSA:3.40.50.360 24 179 3.5E-15 T 22-04-2016 IPR029039 Flavoprotein-like domain SRM_RS15305 d33d044ce540921159d8e18f327d2b27 252 Pfam PF03358 NADPH-dependent FMN reductase 27 174 1.9E-12 T 22-04-2016 IPR005025 NADPH-dependent FMN reductase-like GO:0016491 SRM_RS15305 d33d044ce540921159d8e18f327d2b27 252 PANTHER PTHR10204 20 193 5.7E-16 T 22-04-2016 SRM_RS15305 d33d044ce540921159d8e18f327d2b27 252 SUPERFAMILY SSF52218 24 224 6.29E-29 T 22-04-2016 IPR029039 Flavoprotein-like domain SRM_RS08465 c360f30904415717801ddb14ba99d037 101 PANTHER PTHR11434 4 100 3.3E-39 T 22-04-2016 IPR001133 NADH-ubiquinone oxidoreductase chain 4L/K GO:0016651|GO:0042773|GO:0055114 SRM_RS08465 c360f30904415717801ddb14ba99d037 101 Pfam PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L 8 96 4.5E-28 T 22-04-2016 IPR001133 NADH-ubiquinone oxidoreductase chain 4L/K GO:0016651|GO:0042773|GO:0055114 SRM_RS08465 c360f30904415717801ddb14ba99d037 101 PANTHER PTHR11434:SF0 4 100 3.3E-39 T 22-04-2016 SRM_RS08465 c360f30904415717801ddb14ba99d037 101 Hamap MF_01456 NAD(P)H-quinone oxidoreductase subunit 4L, chloroplastic [ndhE]. 1 101 19.788 T 22-04-2016 IPR001133 NADH-ubiquinone oxidoreductase chain 4L/K GO:0016651|GO:0042773|GO:0055114 SRM_RS13435 e9c67179f0865b9c49ab766e58660691 703 SUPERFAMILY SSF82171 59 447 2.62E-48 T 22-04-2016 SRM_RS13435 e9c67179f0865b9c49ab766e58660691 703 PANTHER PTHR11731 63 701 6.5E-83 T 22-04-2016 SRM_RS13435 e9c67179f0865b9c49ab766e58660691 703 SUPERFAMILY SSF53474 454 701 8.7E-60 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold SRM_RS13435 e9c67179f0865b9c49ab766e58660691 703 Gene3D G3DSA:2.130.10.10 54 422 9.0E-60 T 22-04-2016 IPR015943 WD40/YVTN repeat-like-containing domain GO:0005515 SRM_RS13435 e9c67179f0865b9c49ab766e58660691 703 Pfam PF00326 Prolyl oligopeptidase family 495 701 4.0E-44 T 22-04-2016 IPR001375 Peptidase S9, prolyl oligopeptidase, catalytic domain GO:0006508|GO:0008236 SRM_RS13435 e9c67179f0865b9c49ab766e58660691 703 Gene3D G3DSA:3.40.50.1820 449 701 1.0E-58 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold SRM_RS13435 e9c67179f0865b9c49ab766e58660691 703 Pfam PF07676 WD40-like Beta Propeller Repeat 104 140 6.2E-8 T 22-04-2016 IPR011659 WD40-like Beta Propeller SRM_RS13435 e9c67179f0865b9c49ab766e58660691 703 Pfam PF07676 WD40-like Beta Propeller Repeat 285 310 0.001 T 22-04-2016 IPR011659 WD40-like Beta Propeller SRM_RS13435 e9c67179f0865b9c49ab766e58660691 703 Pfam PF07676 WD40-like Beta Propeller Repeat 233 269 0.022 T 22-04-2016 IPR011659 WD40-like Beta Propeller SRM_RS09465 1f8d1d04021c62e894c280a10b4f0546 225 PANTHER PTHR18901 1 216 6.6E-52 T 22-04-2016 SRM_RS09465 1f8d1d04021c62e894c280a10b4f0546 225 Gene3D G3DSA:1.10.150.240 19 73 7.0E-9 T 22-04-2016 IPR023198 Phosphoglycolate phosphatase, domain 2 SRM_RS09465 1f8d1d04021c62e894c280a10b4f0546 225 PANTHER PTHR18901:SF27 1 216 6.6E-52 T 22-04-2016 SRM_RS09465 1f8d1d04021c62e894c280a10b4f0546 225 SUPERFAMILY SSF56784 1 221 1.52E-39 T 22-04-2016 IPR023214 HAD-like domain SRM_RS09465 1f8d1d04021c62e894c280a10b4f0546 225 Gene3D G3DSA:3.40.50.1000 74 223 2.1E-33 T 22-04-2016 IPR023214 HAD-like domain SRM_RS09465 1f8d1d04021c62e894c280a10b4f0546 225 Pfam PF13419 Haloacid dehalogenase-like hydrolase 4 192 1.2E-16 T 22-04-2016 IPR023214 HAD-like domain SRM_RS12965 4a8a7fd529b981f7c3b1ac3bf8f0c119 407 Gene3D G3DSA:1.20.1250.20 28 199 2.0E-27 T 22-04-2016 SRM_RS12965 4a8a7fd529b981f7c3b1ac3bf8f0c119 407 Gene3D G3DSA:1.20.1250.20 225 404 1.3E-23 T 22-04-2016 SRM_RS12965 4a8a7fd529b981f7c3b1ac3bf8f0c119 407 ProSitePatterns PS00216 Sugar transport proteins signature 1. 81 97 - T 22-04-2016 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 SRM_RS12965 4a8a7fd529b981f7c3b1ac3bf8f0c119 407 PANTHER PTHR23501 28 405 8.3E-44 T 22-04-2016 SRM_RS12965 4a8a7fd529b981f7c3b1ac3bf8f0c119 407 Pfam PF07690 Major Facilitator Superfamily 32 300 6.3E-32 T 22-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 SRM_RS12965 4a8a7fd529b981f7c3b1ac3bf8f0c119 407 SUPERFAMILY SSF103473 28 404 1.44E-60 T 22-04-2016 IPR020846 Major facilitator superfamily domain SRM_RS12965 4a8a7fd529b981f7c3b1ac3bf8f0c119 407 PRINTS PR01035 Tetracycline resistance protein signature 293 314 6.6E-9 T 22-04-2016 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 SRM_RS12965 4a8a7fd529b981f7c3b1ac3bf8f0c119 407 PRINTS PR01035 Tetracycline resistance protein signature 34 50 6.6E-9 T 22-04-2016 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 SRM_RS12965 4a8a7fd529b981f7c3b1ac3bf8f0c119 407 PRINTS PR01035 Tetracycline resistance protein signature 152 174 6.6E-9 T 22-04-2016 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 SRM_RS12965 4a8a7fd529b981f7c3b1ac3bf8f0c119 407 PRINTS PR01035 Tetracycline resistance protein signature 63 82 6.6E-9 T 22-04-2016 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 SRM_RS15100 73f17d7afe8a19bdba07a1a1b26d6cbd 232 Gene3D G3DSA:3.40.50.150 10 222 4.6E-33 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SRM_RS15100 73f17d7afe8a19bdba07a1a1b26d6cbd 232 PANTHER PTHR10108 8 212 3.3E-17 T 22-04-2016 SRM_RS15100 73f17d7afe8a19bdba07a1a1b26d6cbd 232 Pfam PF13649 Methyltransferase domain 51 146 8.4E-13 T 22-04-2016 SRM_RS15100 73f17d7afe8a19bdba07a1a1b26d6cbd 232 SUPERFAMILY SSF53335 11 212 3.19E-29 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SRM_RS10250 e7bca972d68e5371d5050be89b7ac07b 349 TIGRFAM TIGR00020 prfB: peptide chain release factor 2 3 338 2.1E-125 T 22-04-2016 IPR004374 Peptide chain release factor 2 GO:0005737|GO:0006415|GO:0016149 SRM_RS10250 e7bca972d68e5371d5050be89b7ac07b 349 Gene3D G3DSA:1.20.58.410 3 84 7.8E-16 T 22-04-2016 SRM_RS10250 e7bca972d68e5371d5050be89b7ac07b 349 Pfam PF03462 PCRF domain 3 188 1.7E-61 T 22-04-2016 IPR005139 Peptide chain release factor GO:0005737|GO:0006415|GO:0016149 SRM_RS10250 e7bca972d68e5371d5050be89b7ac07b 349 PANTHER PTHR11075 1 348 5.4E-137 T 22-04-2016 SRM_RS10250 e7bca972d68e5371d5050be89b7ac07b 349 PANTHER PTHR11075:SF6 1 348 5.4E-137 T 22-04-2016 IPR004374 Peptide chain release factor 2 GO:0005737|GO:0006415|GO:0016149 SRM_RS10250 e7bca972d68e5371d5050be89b7ac07b 349 ProSitePatterns PS00745 Prokaryotic-type class I peptide chain release factors signature. 213 229 - T 22-04-2016 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 SRM_RS10250 e7bca972d68e5371d5050be89b7ac07b 349 Pfam PF00472 RF-1 domain 199 313 2.1E-30 T 22-04-2016 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 SRM_RS10250 e7bca972d68e5371d5050be89b7ac07b 349 SMART SM00937 53 163 8.7E-51 T 22-04-2016 IPR005139 Peptide chain release factor GO:0005737|GO:0006415|GO:0016149 SRM_RS10250 e7bca972d68e5371d5050be89b7ac07b 349 SUPERFAMILY SSF75620 3 339 3.79E-112 T 22-04-2016 SRM_RS10250 e7bca972d68e5371d5050be89b7ac07b 349 Gene3D G3DSA:3.30.160.20 196 281 2.3E-24 T 22-04-2016 IPR014720 Double-stranded RNA-binding domain SRM_RS13550 dc9d3ea6c7fc9a304b68a0e8e949364f 360 Pfam PF00586 AIR synthase related protein, N-terminal domain 42 153 4.8E-21 T 22-04-2016 IPR016188 PurM-like, N-terminal domain SRM_RS13550 dc9d3ea6c7fc9a304b68a0e8e949364f 360 PANTHER PTHR30270:SF0 1 357 3.4E-104 T 22-04-2016 SRM_RS13550 dc9d3ea6c7fc9a304b68a0e8e949364f 360 PANTHER PTHR30270 1 357 3.4E-104 T 22-04-2016 IPR006283 Thiamine-monophosphate kinase GO:0009030|GO:0009228 KEGG: 00730+2.7.4.16|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6896|MetaCyc: PWY-6897|UniPathway: UPA00060 SRM_RS13550 dc9d3ea6c7fc9a304b68a0e8e949364f 360 Gene3D G3DSA:3.30.1330.10 11 156 3.0E-39 T 22-04-2016 IPR016188 PurM-like, N-terminal domain SRM_RS13550 dc9d3ea6c7fc9a304b68a0e8e949364f 360 PIRSF PIRSF005303 10 350 1.4E-95 T 22-04-2016 IPR006283 Thiamine-monophosphate kinase GO:0009030|GO:0009228 KEGG: 00730+2.7.4.16|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6896|MetaCyc: PWY-6897|UniPathway: UPA00060 SRM_RS13550 dc9d3ea6c7fc9a304b68a0e8e949364f 360 Hamap MF_02128 Thiamine-monophosphate kinase [thiL]. 15 347 28.673 T 22-04-2016 IPR006283 Thiamine-monophosphate kinase GO:0009030|GO:0009228 KEGG: 00730+2.7.4.16|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6896|MetaCyc: PWY-6897|UniPathway: UPA00060 SRM_RS13550 dc9d3ea6c7fc9a304b68a0e8e949364f 360 SUPERFAMILY SSF56042 159 325 7.33E-33 T 22-04-2016 IPR010918 AIR synthase-related protein, C-terminal domain SRM_RS13550 dc9d3ea6c7fc9a304b68a0e8e949364f 360 Pfam PF02769 AIR synthase related protein, C-terminal domain 166 325 1.0E-6 T 22-04-2016 IPR010918 AIR synthase-related protein, C-terminal domain SRM_RS13550 dc9d3ea6c7fc9a304b68a0e8e949364f 360 SUPERFAMILY SSF55326 14 153 4.36E-33 T 22-04-2016 SRM_RS13550 dc9d3ea6c7fc9a304b68a0e8e949364f 360 TIGRFAM TIGR01379 thiL: thiamine-phosphate kinase 16 350 3.5E-89 T 22-04-2016 IPR006283 Thiamine-monophosphate kinase GO:0009030|GO:0009228 KEGG: 00730+2.7.4.16|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6896|MetaCyc: PWY-6897|UniPathway: UPA00060 SRM_RS13550 dc9d3ea6c7fc9a304b68a0e8e949364f 360 Gene3D G3DSA:3.90.650.10 161 350 1.5E-43 T 22-04-2016 IPR010918 AIR synthase-related protein, C-terminal domain SRM_RS10935 6f395832cf7f62ae5c5c2d30b42ab331 364 PANTHER PTHR30573:SF0 18 363 2.3E-124 T 22-04-2016 SRM_RS10935 6f395832cf7f62ae5c5c2d30b42ab331 364 Gene3D G3DSA:3.20.20.70 33 142 2.3E-4 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 SRM_RS10935 6f395832cf7f62ae5c5c2d30b42ab331 364 Gene3D G3DSA:3.20.20.70 233 262 2.3E-4 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 SRM_RS10935 6f395832cf7f62ae5c5c2d30b42ab331 364 TIGRFAM TIGR00550 nadA: quinolinate synthetase complex, A subunit 34 363 9.5E-99 T 22-04-2016 IPR003473 Quinolinate synthetase A GO:0008987|GO:0009435|GO:0051539 MetaCyc: PWY-5316|MetaCyc: PWY-7342|UniPathway: UPA00253 SRM_RS10935 6f395832cf7f62ae5c5c2d30b42ab331 364 PANTHER PTHR30573 18 363 2.3E-124 T 22-04-2016 SRM_RS10935 6f395832cf7f62ae5c5c2d30b42ab331 364 SUPERFAMILY SSF142754 35 193 1.26E-104 T 22-04-2016 SRM_RS10935 6f395832cf7f62ae5c5c2d30b42ab331 364 SUPERFAMILY SSF142754 224 363 1.26E-104 T 22-04-2016 SRM_RS10935 6f395832cf7f62ae5c5c2d30b42ab331 364 Pfam PF02445 Quinolinate synthetase A protein 39 362 1.8E-114 T 22-04-2016 IPR003473 Quinolinate synthetase A GO:0008987|GO:0009435|GO:0051539 MetaCyc: PWY-5316|MetaCyc: PWY-7342|UniPathway: UPA00253 SRM_RS08480 120b7c4aaf144d62f4a18fb6fc0125e8 96 PANTHER PTHR12599 5 96 8.3E-32 T 22-04-2016 IPR001533 Transcriptional coactivator/pterin dehydratase GO:0006729|GO:0008124 MetaCyc: PWY-7158 SRM_RS08480 120b7c4aaf144d62f4a18fb6fc0125e8 96 Gene3D G3DSA:3.30.1360.20 5 96 4.8E-30 T 22-04-2016 IPR001533 Transcriptional coactivator/pterin dehydratase GO:0006729|GO:0008124 MetaCyc: PWY-7158 SRM_RS08480 120b7c4aaf144d62f4a18fb6fc0125e8 96 SUPERFAMILY SSF55248 5 96 2.09E-29 T 22-04-2016 IPR001533 Transcriptional coactivator/pterin dehydratase GO:0006729|GO:0008124 MetaCyc: PWY-7158 SRM_RS08480 120b7c4aaf144d62f4a18fb6fc0125e8 96 Pfam PF01329 Pterin 4 alpha carbinolamine dehydratase 6 95 2.5E-28 T 22-04-2016 IPR001533 Transcriptional coactivator/pterin dehydratase GO:0006729|GO:0008124 MetaCyc: PWY-7158 SRM_RS08480 120b7c4aaf144d62f4a18fb6fc0125e8 96 Hamap MF_00434 Putative pterin-4-alpha-carbinolamine dehydratase. 4 96 23.593 T 22-04-2016 IPR001533 Transcriptional coactivator/pterin dehydratase GO:0006729|GO:0008124 MetaCyc: PWY-7158 SRM_RS12275 560a97b4163a10322c2ec3c48038286e 331 Pfam PF07726 ATPase family associated with various cellular activities (AAA) 50 180 1.8E-65 T 22-04-2016 IPR011703 ATPase, AAA-3 GO:0005524|GO:0016887 SRM_RS12275 560a97b4163a10322c2ec3c48038286e 331 Gene3D G3DSA:3.40.50.300 31 196 7.4E-44 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SRM_RS12275 560a97b4163a10322c2ec3c48038286e 331 PANTHER PTHR11603:SF148 10 331 2.5E-140 T 22-04-2016 SRM_RS12275 560a97b4163a10322c2ec3c48038286e 331 PANTHER PTHR11603 10 331 2.5E-140 T 22-04-2016 SRM_RS12275 560a97b4163a10322c2ec3c48038286e 331 Gene3D G3DSA:1.10.8.300 211 328 8.2E-38 T 22-04-2016 SRM_RS12275 560a97b4163a10322c2ec3c48038286e 331 PIRSF PIRSF002849 1 331 1.7E-131 T 22-04-2016 IPR016366 ATPase chaperone, AAA-type, MoxR, predicted SRM_RS12275 560a97b4163a10322c2ec3c48038286e 331 SUPERFAMILY SSF52540 16 303 4.24E-43 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SRM_RS08035 e00802d616ac033cef9dff3d1e3e6a66 252 PANTHER PTHR13256 41 240 9.3E-34 T 22-04-2016 SRM_RS08035 e00802d616ac033cef9dff3d1e3e6a66 252 PANTHER PTHR13256:SF39 41 240 9.3E-34 T 22-04-2016 SRM_RS08035 e00802d616ac033cef9dff3d1e3e6a66 252 Pfam PF13302 Acetyltransferase (GNAT) domain 66 208 1.4E-15 T 22-04-2016 IPR000182 GNAT domain GO:0008080 SRM_RS08035 e00802d616ac033cef9dff3d1e3e6a66 252 SUPERFAMILY SSF55729 58 232 4.46E-34 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase SRM_RS08035 e00802d616ac033cef9dff3d1e3e6a66 252 Gene3D G3DSA:3.40.630.30 50 241 1.7E-38 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase SRM_RS01175 101b1f5874837c70cbded5c26967303f 210 SUPERFAMILY SSF56925 32 208 1.15E-8 T 22-04-2016 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 SRM_RS01175 101b1f5874837c70cbded5c26967303f 210 Gene3D G3DSA:2.40.160.20 20 198 8.9E-10 T 22-04-2016 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 SRM_RS01175 101b1f5874837c70cbded5c26967303f 210 Pfam PF13505 Outer membrane protein beta-barrel domain 15 208 5.9E-25 T 22-04-2016 IPR027385 Outer membrane protein beta-barrel SRM_RS13230 e072a3c1e85cf23ceb440d716b83cdcc 398 PANTHER PTHR11808 15 398 3.0E-206 T 22-04-2016 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 SRM_RS13230 e072a3c1e85cf23ceb440d716b83cdcc 398 Gene3D G3DSA:3.40.640.10 19 258 2.7E-99 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 SRM_RS13230 e072a3c1e85cf23ceb440d716b83cdcc 398 Gene3D G3DSA:3.90.1150.10 261 397 4.6E-54 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 SRM_RS13230 e072a3c1e85cf23ceb440d716b83cdcc 398 Pfam PF01053 Cys/Met metabolism PLP-dependent enzyme 22 395 1.4E-153 T 22-04-2016 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 SRM_RS13230 e072a3c1e85cf23ceb440d716b83cdcc 398 SUPERFAMILY SSF53383 21 397 7.85E-127 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase SRM_RS13230 e072a3c1e85cf23ceb440d716b83cdcc 398 ProSitePatterns PS00868 Cys/Met metabolism enzymes pyridoxal-phosphate attachment site. 204 218 - T 22-04-2016 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 SRM_RS13230 e072a3c1e85cf23ceb440d716b83cdcc 398 PANTHER PTHR11808:SF15 15 398 3.0E-206 T 22-04-2016 SRM_RS13230 e072a3c1e85cf23ceb440d716b83cdcc 398 PIRSF PIRSF001434 9 398 2.6E-150 T 22-04-2016 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 SRM_RS10460 c2bed14c04e842c0fc893ab04b071d4b 366 Gene3D G3DSA:2.60.40.1120 27 105 5.1E-10 T 22-04-2016 IPR014766 Carboxypeptidase, regulatory domain SRM_RS10460 c2bed14c04e842c0fc893ab04b071d4b 366 Pfam PF13715 CarboxypepD_reg-like domain 27 107 6.9E-12 T 22-04-2016 SRM_RS10460 c2bed14c04e842c0fc893ab04b071d4b 366 SUPERFAMILY SSF49464 25 107 1.06E-12 T 22-04-2016 IPR008969 Carboxypeptidase-like, regulatory domain SRM_RS15615 e1e4e97ccf5f10b20758122fed6855ce 779 SMART SM00065 274 421 4.1E-16 T 22-04-2016 IPR003018 GAF domain GO:0005515 SRM_RS15615 e1e4e97ccf5f10b20758122fed6855ce 779 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 514 543 3.3E-20 T 22-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 SRM_RS15615 e1e4e97ccf5f10b20758122fed6855ce 779 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 591 618 3.3E-20 T 22-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 SRM_RS15615 e1e4e97ccf5f10b20758122fed6855ce 779 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 620 649 3.3E-20 T 22-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 SRM_RS15615 e1e4e97ccf5f10b20758122fed6855ce 779 SMART SM00283 493 754 4.1E-86 T 22-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 SRM_RS15615 e1e4e97ccf5f10b20758122fed6855ce 779 SUPERFAMILY SSF58104 445 755 6.02E-74 T 22-04-2016 SRM_RS15615 e1e4e97ccf5f10b20758122fed6855ce 779 Gene3D G3DSA:3.30.450.40 250 425 1.4E-23 T 22-04-2016 IPR029016 GAF domain-like SRM_RS15615 e1e4e97ccf5f10b20758122fed6855ce 779 Pfam PF13185 GAF domain 273 411 2.4E-14 T 22-04-2016 IPR003018 GAF domain GO:0005515 SRM_RS15615 e1e4e97ccf5f10b20758122fed6855ce 779 SUPERFAMILY SSF55781 258 433 6.76E-24 T 22-04-2016 IPR029016 GAF domain-like SRM_RS15615 e1e4e97ccf5f10b20758122fed6855ce 779 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 550 753 5.6E-54 T 22-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 SRM_RS15615 e1e4e97ccf5f10b20758122fed6855ce 779 Gene3D G3DSA:1.10.287.950 507 726 2.4E-58 T 22-04-2016 SRM_RS15615 e1e4e97ccf5f10b20758122fed6855ce 779 PANTHER PTHR32089 432 757 7.7E-109 T 22-04-2016 SRM_RS07260 9bd694c1f32baab448899f7906135cc6 85 Pfam PF00512 His Kinase A (phospho-acceptor) domain 14 75 2.0E-10 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SRM_RS07260 9bd694c1f32baab448899f7906135cc6 85 SMART SM00388 12 78 0.001 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SRM_RS07260 9bd694c1f32baab448899f7906135cc6 85 SUPERFAMILY SSF47384 10 74 2.55E-9 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SRM_RS07260 9bd694c1f32baab448899f7906135cc6 85 Gene3D G3DSA:1.10.287.130 10 78 2.1E-8 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SRM_RS08655 e3f08f4642436088711c1b830798ddda 216 Gene3D G3DSA:1.10.10.10 141 208 3.7E-6 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SRM_RS08655 e3f08f4642436088711c1b830798ddda 216 Pfam PF04326 Putative DNA-binding domain 15 133 3.7E-20 T 22-04-2016 IPR007421 Schlafen, AAA domain GO:0005524 SRM_RS08655 e3f08f4642436088711c1b830798ddda 216 SUPERFAMILY SSF46785 154 208 1.87E-5 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SRM_RS09745 eb1504fae65e562022ef44f9dd347924 1169 Gene3D G3DSA:3.40.50.300 222 418 3.2E-32 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SRM_RS09745 eb1504fae65e562022ef44f9dd347924 1169 Gene3D G3DSA:3.40.50.280 8 140 1.2E-36 T 22-04-2016 IPR006158 Cobalamin (vitamin B12)-binding domain GO:0031419|GO:0046872 SRM_RS09745 eb1504fae65e562022ef44f9dd347924 1169 Pfam PF01642 Methylmalonyl-CoA mutase 589 1163 4.2E-140 T 22-04-2016 IPR006099 Methylmalonyl-CoA mutase, alpha/beta chain, catalytic GO:0008152|GO:0016866|GO:0031419 SRM_RS09745 eb1504fae65e562022ef44f9dd347924 1169 SUPERFAMILY SSF52540 129 488 2.33E-51 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SRM_RS09745 eb1504fae65e562022ef44f9dd347924 1169 Gene3D G3DSA:3.20.20.240 798 1165 1.3E-194 T 22-04-2016 IPR014348 Cobalamin (vitamin B12)-dependent enzyme, catalytic subdomain GO:0008152|GO:0016866|GO:0031419 SRM_RS09745 eb1504fae65e562022ef44f9dd347924 1169 Gene3D G3DSA:3.20.20.240 585 721 1.3E-194 T 22-04-2016 IPR014348 Cobalamin (vitamin B12)-dependent enzyme, catalytic subdomain GO:0008152|GO:0016866|GO:0031419 SRM_RS09745 eb1504fae65e562022ef44f9dd347924 1169 Pfam PF02310 B12 binding domain 13 115 8.8E-13 T 22-04-2016 IPR006158 Cobalamin (vitamin B12)-binding domain GO:0031419|GO:0046872 SRM_RS09745 eb1504fae65e562022ef44f9dd347924 1169 PANTHER PTHR23408:SF1 799 1169 1.9E-198 T 22-04-2016 SRM_RS09745 eb1504fae65e562022ef44f9dd347924 1169 PANTHER PTHR23408:SF1 503 722 1.9E-198 T 22-04-2016 SRM_RS09745 eb1504fae65e562022ef44f9dd347924 1169 TIGRFAM TIGR00641 acid_CoA_mut_N: methylmalonyl-CoA mutase N-terminal domain 799 1168 3.0E-92 T 22-04-2016 IPR006098 Methylmalonyl-CoA mutase, alpha chain, catalytic GO:0004494|GO:0008152|GO:0031419 SRM_RS09745 eb1504fae65e562022ef44f9dd347924 1169 SUPERFAMILY SSF51703 798 1165 9.42E-145 T 22-04-2016 IPR016176 Cobalamin (vitamin B12)-dependent enzyme, catalytic GO:0003824|GO:0008152|GO:0031419 SRM_RS09745 eb1504fae65e562022ef44f9dd347924 1169 SUPERFAMILY SSF51703 535 721 9.42E-145 T 22-04-2016 IPR016176 Cobalamin (vitamin B12)-dependent enzyme, catalytic GO:0003824|GO:0008152|GO:0031419 SRM_RS09745 eb1504fae65e562022ef44f9dd347924 1169 PANTHER PTHR23408 799 1169 1.9E-198 T 22-04-2016 SRM_RS09745 eb1504fae65e562022ef44f9dd347924 1169 PANTHER PTHR23408 503 722 1.9E-198 T 22-04-2016 SRM_RS09745 eb1504fae65e562022ef44f9dd347924 1169 Pfam PF03308 ArgK protein 219 409 1.5E-41 T 22-04-2016 SRM_RS09745 eb1504fae65e562022ef44f9dd347924 1169 SUPERFAMILY SSF52242 6 144 1.18E-41 T 22-04-2016 IPR006158 Cobalamin (vitamin B12)-binding domain GO:0031419|GO:0046872 SRM_RS13190 a8f60b0498b5da61b124006292fa2328 523 Gene3D G3DSA:3.40.1450.10 79 315 5.8E-93 T 22-04-2016 IPR011258 BPG-independent PGAM, N-terminal GO:0004619|GO:0005737|GO:0006007|GO:0030145 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|UniPathway: UPA00109 SRM_RS13190 a8f60b0498b5da61b124006292fa2328 523 TIGRFAM TIGR01307 pgm_bpd_ind: phosphoglycerate mutase (2,3-diphosphoglycerate-independent) 6 514 4.2E-201 T 22-04-2016 IPR005995 Phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent GO:0004619|GO:0006007 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|UniPathway: UPA00109 SRM_RS13190 a8f60b0498b5da61b124006292fa2328 523 PANTHER PTHR31637 8 519 3.4E-245 T 22-04-2016 SRM_RS13190 a8f60b0498b5da61b124006292fa2328 523 Pfam PF01676 Metalloenzyme superfamily 5 502 3.5E-66 T 22-04-2016 IPR006124 Metalloenzyme GO:0003824|GO:0046872 SRM_RS13190 a8f60b0498b5da61b124006292fa2328 523 Gene3D G3DSA:3.40.720.10 5 78 4.0E-76 T 22-04-2016 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 SRM_RS13190 a8f60b0498b5da61b124006292fa2328 523 Gene3D G3DSA:3.40.720.10 320 516 4.0E-76 T 22-04-2016 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 SRM_RS13190 a8f60b0498b5da61b124006292fa2328 523 PANTHER PTHR31637:SF0 8 519 3.4E-245 T 22-04-2016 SRM_RS13190 a8f60b0498b5da61b124006292fa2328 523 Hamap MF_01038 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [gpmI]. 5 516 47.269 T 22-04-2016 IPR005995 Phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent GO:0004619|GO:0006007 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|UniPathway: UPA00109 SRM_RS13190 a8f60b0498b5da61b124006292fa2328 523 SUPERFAMILY SSF53649 5 78 1.83E-64 T 22-04-2016 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 SRM_RS13190 a8f60b0498b5da61b124006292fa2328 523 SUPERFAMILY SSF53649 316 515 1.83E-64 T 22-04-2016 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 SRM_RS13190 a8f60b0498b5da61b124006292fa2328 523 PIRSF PIRSF001492 1 518 1.7E-190 T 22-04-2016 IPR005995 Phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent GO:0004619|GO:0006007 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|UniPathway: UPA00109 SRM_RS13190 a8f60b0498b5da61b124006292fa2328 523 SUPERFAMILY SSF64158 78 314 6.54E-82 T 22-04-2016 IPR011258 BPG-independent PGAM, N-terminal GO:0004619|GO:0005737|GO:0006007|GO:0030145 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|UniPathway: UPA00109 SRM_RS13190 a8f60b0498b5da61b124006292fa2328 523 Pfam PF06415 BPG-independent PGAM N-terminus (iPGM_N) 83 305 1.5E-79 T 22-04-2016 IPR011258 BPG-independent PGAM, N-terminal GO:0004619|GO:0005737|GO:0006007|GO:0030145 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|UniPathway: UPA00109 SRM_RS08205 9c362c58362d53da18fea45e17ec5930 167 PANTHER PTHR37953 57 163 1.7E-24 T 22-04-2016 SRM_RS08205 9c362c58362d53da18fea45e17ec5930 167 Pfam PF02643 Uncharacterized ACR, COG1430 58 163 1.2E-29 T 22-04-2016 IPR003795 Protein of unknown function DUF192 SRM_RS08205 9c362c58362d53da18fea45e17ec5930 167 PANTHER PTHR37953:SF1 57 163 1.7E-24 T 22-04-2016 SRM_RS03500 ce01a33d9f70e7ba3ff8c40cba5b8523 416 PANTHER PTHR41368 34 413 4.9E-96 T 22-04-2016 SRM_RS03500 ce01a33d9f70e7ba3ff8c40cba5b8523 416 Gene3D G3DSA:3.40.630.30 244 404 1.5E-11 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase SRM_RS03500 ce01a33d9f70e7ba3ff8c40cba5b8523 416 SUPERFAMILY SSF55729 175 310 1.84E-25 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase SRM_RS03500 ce01a33d9f70e7ba3ff8c40cba5b8523 416 SUPERFAMILY SSF55729 340 406 1.84E-25 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase SRM_RS03500 ce01a33d9f70e7ba3ff8c40cba5b8523 416 SUPERFAMILY SSF55729 37 147 1.84E-25 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase SRM_RS03500 ce01a33d9f70e7ba3ff8c40cba5b8523 416 Gene3D G3DSA:3.40.630.30 22 156 1.5E-5 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase SRM_RS01470 99fc04c1b4ef378f6a70eed1fba42183 560 TIGRFAM TIGR02510 NrdE-prime: ribonucleoside-diphosphate reductase, alpha chain 1 560 0.0 T 22-04-2016 IPR013350 Ribonucleotide reductase alpha chain SRM_RS01470 99fc04c1b4ef378f6a70eed1fba42183 560 Gene3D G3DSA:3.20.70.20 53 436 4.8E-51 T 22-04-2016 SRM_RS01470 99fc04c1b4ef378f6a70eed1fba42183 560 Gene3D G3DSA:3.20.70.20 497 536 4.8E-51 T 22-04-2016 SRM_RS01470 99fc04c1b4ef378f6a70eed1fba42183 560 Pfam PF02867 Ribonucleotide reductase, barrel domain 387 538 6.8E-35 T 22-04-2016 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227 SRM_RS01470 99fc04c1b4ef378f6a70eed1fba42183 560 Pfam PF02867 Ribonucleotide reductase, barrel domain 213 381 1.4E-22 T 22-04-2016 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227 SRM_RS01470 99fc04c1b4ef378f6a70eed1fba42183 560 Pfam PF02867 Ribonucleotide reductase, barrel domain 89 210 1.3E-26 T 22-04-2016 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227 SRM_RS01470 99fc04c1b4ef378f6a70eed1fba42183 560 SUPERFAMILY SSF51998 471 539 3.02E-109 T 22-04-2016 SRM_RS01470 99fc04c1b4ef378f6a70eed1fba42183 560 SUPERFAMILY SSF51998 87 440 3.02E-109 T 22-04-2016 SRM_RS01470 99fc04c1b4ef378f6a70eed1fba42183 560 PANTHER PTHR11573 26 539 1.8E-120 T 22-04-2016 SRM_RS01470 99fc04c1b4ef378f6a70eed1fba42183 560 PRINTS PR01183 Ribonucleotide reductase large chain signature 329 351 4.7E-13 T 22-04-2016 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227 SRM_RS01470 99fc04c1b4ef378f6a70eed1fba42183 560 PRINTS PR01183 Ribonucleotide reductase large chain signature 162 181 4.7E-13 T 22-04-2016 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227 SRM_RS01470 99fc04c1b4ef378f6a70eed1fba42183 560 PRINTS PR01183 Ribonucleotide reductase large chain signature 390 417 4.7E-13 T 22-04-2016 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227 SRM_RS07610 654fc67ccb5cdd2a8e2770dfe90807af 762 SUPERFAMILY SSF160246 175 321 6.8E-8 T 22-04-2016 SRM_RS07610 654fc67ccb5cdd2a8e2770dfe90807af 762 Gene3D G3DSA:3.30.450.90 339 479 4.0E-28 T 22-04-2016 SRM_RS07610 654fc67ccb5cdd2a8e2770dfe90807af 762 PANTHER PTHR30258:SF1 164 760 8.8E-122 T 22-04-2016 SRM_RS07610 654fc67ccb5cdd2a8e2770dfe90807af 762 ProSitePatterns PS00662 Bacterial type II secretion system protein E signature. 572 586 - T 22-04-2016 IPR001482 Type II secretion system protein E GO:0005524|GO:0006810 SRM_RS07610 654fc67ccb5cdd2a8e2770dfe90807af 762 PANTHER PTHR30258 164 760 8.8E-122 T 22-04-2016 SRM_RS07610 654fc67ccb5cdd2a8e2770dfe90807af 762 Pfam PF00437 Type II/IV secretion system protein 373 644 5.7E-58 T 22-04-2016 IPR001482 Type II secretion system protein E GO:0005524|GO:0006810 SRM_RS07610 654fc67ccb5cdd2a8e2770dfe90807af 762 SUPERFAMILY SSF52540 349 760 2.89E-73 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SRM_RS07610 654fc67ccb5cdd2a8e2770dfe90807af 762 Gene3D G3DSA:3.40.50.300 484 760 1.5E-81 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SRM_RS12500 0d7e36684f8392b34686dca3feb576d2 201 PANTHER PTHR35400 1 192 2.7E-39 T 22-04-2016 SRM_RS12500 0d7e36684f8392b34686dca3feb576d2 201 Gene3D G3DSA:3.90.1570.10 32 161 1.1E-12 T 22-04-2016 IPR012296 Nuclease, putative, TT1808 SRM_RS12500 0d7e36684f8392b34686dca3feb576d2 201 SUPERFAMILY SSF52980 33 160 6.43E-17 T 22-04-2016 IPR011335 Restriction endonuclease type II-like SRM_RS12500 0d7e36684f8392b34686dca3feb576d2 201 PANTHER PTHR35400:SF1 1 192 2.7E-39 T 22-04-2016 SRM_RS12500 0d7e36684f8392b34686dca3feb576d2 201 Pfam PF05685 Putative restriction endonuclease 31 175 1.7E-29 T 22-04-2016 IPR008538 Domain of unknown function DUF820 SRM_RS15475 4754c3d5802effed5d9ea4508d9531d2 172 Pfam PF05198 Translation initiation factor IF-3, N-terminal domain 9 75 9.3E-28 T 22-04-2016 IPR019814 Translation initiation factor 3, N-terminal GO:0003743|GO:0006413 SRM_RS15475 4754c3d5802effed5d9ea4508d9531d2 172 Hamap MF_00080 Translation initiation factor IF-3 [infC]. 2 171 27.41 T 22-04-2016 IPR001288 Translation initiation factor 3 GO:0003743|GO:0006413 SRM_RS15475 4754c3d5802effed5d9ea4508d9531d2 172 TIGRFAM TIGR00168 infC: translation initiation factor IF-3 9 170 9.3E-57 T 22-04-2016 IPR001288 Translation initiation factor 3 GO:0003743|GO:0006413 SRM_RS15475 4754c3d5802effed5d9ea4508d9531d2 172 SUPERFAMILY SSF55200 84 172 3.79E-31 T 22-04-2016 IPR019815 Translation initiation factor 3, C-terminal GO:0006413 SRM_RS15475 4754c3d5802effed5d9ea4508d9531d2 172 PANTHER PTHR10938 7 172 1.2E-58 T 22-04-2016 IPR001288 Translation initiation factor 3 GO:0003743|GO:0006413 SRM_RS15475 4754c3d5802effed5d9ea4508d9531d2 172 Pfam PF00707 Translation initiation factor IF-3, C-terminal domain 84 168 1.6E-34 T 22-04-2016 IPR019815 Translation initiation factor 3, C-terminal GO:0006413 SRM_RS15475 4754c3d5802effed5d9ea4508d9531d2 172 SUPERFAMILY SSF54364 7 79 2.88E-23 T 22-04-2016 IPR019814 Translation initiation factor 3, N-terminal GO:0003743|GO:0006413 SRM_RS15475 4754c3d5802effed5d9ea4508d9531d2 172 Gene3D G3DSA:3.10.20.80 5 79 3.7E-30 T 22-04-2016 IPR019814 Translation initiation factor 3, N-terminal GO:0003743|GO:0006413 SRM_RS15475 4754c3d5802effed5d9ea4508d9531d2 172 Gene3D G3DSA:3.30.110.10 80 172 5.0E-35 T 22-04-2016 IPR019815 Translation initiation factor 3, C-terminal GO:0006413 SRM_RS15475 4754c3d5802effed5d9ea4508d9531d2 172 ProSitePatterns PS00938 Initiation factor 3 signature. 59 72 - T 22-04-2016 IPR019813 Translation initiation factor 3, conserved site GO:0003743|GO:0006413 SRM_RS01970 4709e3238eebfd7b1829e9e1e8192f16 637 ProSitePatterns PS00211 ABC transporters family signature. 508 522 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 SRM_RS01970 4709e3238eebfd7b1829e9e1e8192f16 637 PANTHER PTHR24221 12 617 6.8E-122 T 22-04-2016 SRM_RS01970 4709e3238eebfd7b1829e9e1e8192f16 637 Gene3D G3DSA:1.20.1560.10 35 352 5.6E-24 T 22-04-2016 SRM_RS01970 4709e3238eebfd7b1829e9e1e8192f16 637 SUPERFAMILY SSF90123 28 354 1.44E-28 T 22-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 SRM_RS01970 4709e3238eebfd7b1829e9e1e8192f16 637 SUPERFAMILY SSF52540 360 607 2.83E-77 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SRM_RS01970 4709e3238eebfd7b1829e9e1e8192f16 637 SMART SM00382 391 583 6.8E-18 T 22-04-2016 IPR003593 AAA+ ATPase domain SRM_RS01970 4709e3238eebfd7b1829e9e1e8192f16 637 Gene3D G3DSA:3.40.50.300 364 602 6.7E-72 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SRM_RS01970 4709e3238eebfd7b1829e9e1e8192f16 637 PANTHER PTHR24221:SF157 12 617 6.8E-122 T 22-04-2016 SRM_RS01970 4709e3238eebfd7b1829e9e1e8192f16 637 Pfam PF00005 ABC transporter 382 536 3.3E-29 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 SRM_RS14860 5b5e04efb89bbc6e0b912850a1875e4c 141 Gene3D G3DSA:1.20.58.220 66 134 2.9E-4 T 22-04-2016 SRM_RS14860 5b5e04efb89bbc6e0b912850a1875e4c 141 Pfam PF05597 Poly(hydroxyalcanoate) granule associated protein (phasin) 9 127 2.7E-33 T 22-04-2016 IPR008769 Poly granule associated SRM_RS13005 a0356da7977b0d9b68756a0f50630cd9 1089 Pfam PF00929 Exonuclease 690 846 3.9E-9 T 22-04-2016 IPR013520 Exonuclease, RNase T/DNA polymerase III SRM_RS13005 a0356da7977b0d9b68756a0f50630cd9 1089 Pfam PF13361 UvrD-like helicase C-terminal domain 954 1056 2.1E-20 T 22-04-2016 IPR014017 UvrD-like DNA helicase, C-terminal GO:0005524|GO:0016787 SRM_RS13005 a0356da7977b0d9b68756a0f50630cd9 1089 Pfam PF13361 UvrD-like helicase C-terminal domain 276 405 1.4E-11 T 22-04-2016 IPR014017 UvrD-like DNA helicase, C-terminal GO:0005524|GO:0016787 SRM_RS13005 a0356da7977b0d9b68756a0f50630cd9 1089 Gene3D G3DSA:3.30.420.10 688 860 3.7E-24 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 SRM_RS13005 a0356da7977b0d9b68756a0f50630cd9 1089 SUPERFAMILY SSF52540 968 1077 4.87E-28 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SRM_RS13005 a0356da7977b0d9b68756a0f50630cd9 1089 SUPERFAMILY SSF53098 687 864 4.8E-29 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 SRM_RS13005 a0356da7977b0d9b68756a0f50630cd9 1089 Gene3D G3DSA:3.40.50.300 278 391 6.0E-50 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SRM_RS13005 a0356da7977b0d9b68756a0f50630cd9 1089 Gene3D G3DSA:3.40.50.300 993 1079 6.0E-50 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SRM_RS13005 a0356da7977b0d9b68756a0f50630cd9 1089 SMART SM00479 688 861 2.6E-10 T 22-04-2016 IPR013520 Exonuclease, RNase T/DNA polymerase III SRM_RS13005 a0356da7977b0d9b68756a0f50630cd9 1089 Pfam PF00580 UvrD/REP helicase N-terminal domain 168 265 2.6E-25 T 22-04-2016 IPR014016 UvrD-like Helicase, ATP-binding domain GO:0005524 SRM_RS13005 a0356da7977b0d9b68756a0f50630cd9 1089 Pfam PF00580 UvrD/REP helicase N-terminal domain 11 124 1.5E-23 T 22-04-2016 IPR014016 UvrD-like Helicase, ATP-binding domain GO:0005524 SRM_RS13005 a0356da7977b0d9b68756a0f50630cd9 1089 SUPERFAMILY SSF52540 9 406 6.59E-84 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SRM_RS13005 a0356da7977b0d9b68756a0f50630cd9 1089 PANTHER PTHR11070 971 1084 1.4E-105 T 22-04-2016 IPR000212 DNA helicase, UvrD/REP type GO:0003677|GO:0004003|GO:0005524 SRM_RS13005 a0356da7977b0d9b68756a0f50630cd9 1089 PANTHER PTHR11070 10 499 1.4E-105 T 22-04-2016 IPR000212 DNA helicase, UvrD/REP type GO:0003677|GO:0004003|GO:0005524 SRM_RS13005 a0356da7977b0d9b68756a0f50630cd9 1089 Gene3D G3DSA:3.40.50.300 11 266 4.1E-63 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SRM_RS04470 473db66c9aa0c4733f5713b36046796c 147 SUPERFAMILY SSF54427 32 112 2.37E-5 T 22-04-2016 IPR032710 NTF2-like domain SRM_RS04470 473db66c9aa0c4733f5713b36046796c 147 Gene3D G3DSA:3.10.450.50 31 114 2.6E-4 T 22-04-2016 IPR032710 NTF2-like domain SRM_RS04470 473db66c9aa0c4733f5713b36046796c 147 Pfam PF16022 Domain of unknown function (DUF4783) 39 143 5.9E-23 T 22-04-2016 IPR031977 Protein of unknown function DUF4783 SRM_RS09210 dc81b5e3f8ae3b3d936bd974dd15b9be 516 Gene3D G3DSA:3.30.230.10 4 168 8.0E-33 T 22-04-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup SRM_RS09210 dc81b5e3f8ae3b3d936bd974dd15b9be 516 PRINTS PR01657 Mini-chromosome maintenance (MCM) protein family signature 297 311 3.4E-5 T 22-04-2016 IPR001208 MCM domain GO:0003677|GO:0005524|GO:0006260 SRM_RS09210 dc81b5e3f8ae3b3d936bd974dd15b9be 516 PRINTS PR01657 Mini-chromosome maintenance (MCM) protein family signature 216 231 3.4E-5 T 22-04-2016 IPR001208 MCM domain GO:0003677|GO:0005524|GO:0006260 SRM_RS09210 dc81b5e3f8ae3b3d936bd974dd15b9be 516 PRINTS PR01657 Mini-chromosome maintenance (MCM) protein family signature 325 338 3.4E-5 T 22-04-2016 IPR001208 MCM domain GO:0003677|GO:0005524|GO:0006260 SRM_RS09210 dc81b5e3f8ae3b3d936bd974dd15b9be 516 PANTHER PTHR32039 1 511 2.1E-243 T 22-04-2016 SRM_RS09210 dc81b5e3f8ae3b3d936bd974dd15b9be 516 SUPERFAMILY SSF54211 7 169 1.06E-33 T 22-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold SRM_RS09210 dc81b5e3f8ae3b3d936bd974dd15b9be 516 SUPERFAMILY SSF52540 196 510 2.3E-47 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SRM_RS09210 dc81b5e3f8ae3b3d936bd974dd15b9be 516 SMART SM00382 217 400 1.3E-6 T 22-04-2016 IPR003593 AAA+ ATPase domain SRM_RS09210 dc81b5e3f8ae3b3d936bd974dd15b9be 516 Gene3D G3DSA:3.40.50.300 196 396 1.7E-53 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SRM_RS09210 dc81b5e3f8ae3b3d936bd974dd15b9be 516 Pfam PF13541 Subunit ChlI of Mg-chelatase 21 143 6.5E-40 T 22-04-2016 SRM_RS09210 dc81b5e3f8ae3b3d936bd974dd15b9be 516 PANTHER PTHR32039:SF7 1 511 2.1E-243 T 22-04-2016 IPR004482 Mg chelatase-related protein SRM_RS09210 dc81b5e3f8ae3b3d936bd974dd15b9be 516 Pfam PF13335 Magnesium chelatase, subunit ChlI C-terminal 410 507 3.0E-33 T 22-04-2016 IPR025158 Mg chelatase-related protein, C-terminal domain SRM_RS09210 dc81b5e3f8ae3b3d936bd974dd15b9be 516 TIGRFAM TIGR00368 TIGR00368: Mg chelatase-like protein 5 507 2.0E-185 T 22-04-2016 IPR004482 Mg chelatase-related protein SRM_RS09210 dc81b5e3f8ae3b3d936bd974dd15b9be 516 Pfam PF01078 Magnesium chelatase, subunit ChlI 197 400 2.8E-99 T 22-04-2016 IPR000523 Magnesium chelatase ChlI domain SRM_RS01885 e2b5a625bd192e36db444fcaccee11d3 262 Gene3D G3DSA:3.40.50.2000 86 236 2.1E-13 T 22-04-2016 SRM_RS01885 e2b5a625bd192e36db444fcaccee11d3 262 Pfam PF00534 Glycosyl transferases group 1 85 237 3.6E-21 T 22-04-2016 IPR001296 Glycosyl transferase, family 1 SRM_RS01885 e2b5a625bd192e36db444fcaccee11d3 262 PANTHER PTHR12526 86 261 6.4E-29 T 22-04-2016 SRM_RS01885 e2b5a625bd192e36db444fcaccee11d3 262 SUPERFAMILY SSF53756 19 258 5.76E-40 T 22-04-2016 SRM_RS11325 cf855ac64110f4cf4d4eab398a834805 251 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 7 187 3.4E-4 T 22-04-2016 SRM_RS11325 cf855ac64110f4cf4d4eab398a834805 251 Gene3D G3DSA:3.40.50.720 1 250 5.2E-90 T 22-04-2016 IPR016040 NAD(P)-binding domain SRM_RS11325 cf855ac64110f4cf4d4eab398a834805 251 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 16 249 3.6E-73 T 22-04-2016 SRM_RS11325 cf855ac64110f4cf4d4eab398a834805 251 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 135 143 1.4E-11 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SRM_RS11325 cf855ac64110f4cf4d4eab398a834805 251 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 155 174 1.4E-11 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SRM_RS11325 cf855ac64110f4cf4d4eab398a834805 251 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 82 93 1.4E-11 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SRM_RS11325 cf855ac64110f4cf4d4eab398a834805 251 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 142 170 - T 22-04-2016 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 SRM_RS11325 cf855ac64110f4cf4d4eab398a834805 251 SUPERFAMILY SSF51735 6 250 1.95E-85 T 22-04-2016 IPR016040 NAD(P)-binding domain SRM_RS11325 cf855ac64110f4cf4d4eab398a834805 251 PANTHER PTHR24322 11 139 1.2E-54 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SRM_RS11325 cf855ac64110f4cf4d4eab398a834805 251 PANTHER PTHR24322 155 187 1.2E-54 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SRM_RS11325 cf855ac64110f4cf4d4eab398a834805 251 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 176 193 5.3E-46 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SRM_RS11325 cf855ac64110f4cf4d4eab398a834805 251 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 82 93 5.3E-46 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SRM_RS11325 cf855ac64110f4cf4d4eab398a834805 251 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 212 232 5.3E-46 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SRM_RS11325 cf855ac64110f4cf4d4eab398a834805 251 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 8 25 5.3E-46 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SRM_RS11325 cf855ac64110f4cf4d4eab398a834805 251 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 129 145 5.3E-46 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SRM_RS11325 cf855ac64110f4cf4d4eab398a834805 251 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 155 174 5.3E-46 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SRM_RS11680 2067bd493286cd1bc85ae1dccea14153 269 SUPERFAMILY SSF54593 12 133 3.76E-25 T 22-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase SRM_RS11680 2067bd493286cd1bc85ae1dccea14153 269 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 11 124 1.3E-10 T 22-04-2016 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain SRM_RS11680 2067bd493286cd1bc85ae1dccea14153 269 Gene3D G3DSA:3.10.180.10 10 126 3.2E-23 T 22-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase SRM_RS07370 8335f97210ef952c189615a71c3835a6 464 Gene3D G3DSA:3.40.50.300 143 318 7.4E-49 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SRM_RS07370 8335f97210ef952c189615a71c3835a6 464 SUPERFAMILY SSF52540 145 388 2.84E-61 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SRM_RS07370 8335f97210ef952c189615a71c3835a6 464 Gene3D G3DSA:1.10.8.60 322 388 1.5E-21 T 22-04-2016 SRM_RS07370 8335f97210ef952c189615a71c3835a6 464 SMART SM00448 3 116 4.7E-34 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SRM_RS07370 8335f97210ef952c189615a71c3835a6 464 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 359 368 - T 22-04-2016 IPR025944 Sigma-54 interaction domain, conserved site SRM_RS07370 8335f97210ef952c189615a71c3835a6 464 Gene3D G3DSA:3.40.50.2300 3 137 3.0E-36 T 22-04-2016 SRM_RS07370 8335f97210ef952c189615a71c3835a6 464 SUPERFAMILY SSF46689 359 459 1.61E-9 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 SRM_RS07370 8335f97210ef952c189615a71c3835a6 464 SMART SM00382 166 309 3.1E-8 T 22-04-2016 IPR003593 AAA+ ATPase domain SRM_RS07370 8335f97210ef952c189615a71c3835a6 464 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 232 247 - T 22-04-2016 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 SRM_RS07370 8335f97210ef952c189615a71c3835a6 464 PANTHER PTHR32071 1 460 7.1E-161 T 22-04-2016 SRM_RS07370 8335f97210ef952c189615a71c3835a6 464 Gene3D G3DSA:1.10.10.60 395 459 1.0E-7 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 SRM_RS07370 8335f97210ef952c189615a71c3835a6 464 Pfam PF00072 Response regulator receiver domain 5 116 1.4E-28 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SRM_RS07370 8335f97210ef952c189615a71c3835a6 464 SUPERFAMILY SSF52172 3 190 1.85E-40 T 22-04-2016 IPR011006 CheY-like superfamily SRM_RS07370 8335f97210ef952c189615a71c3835a6 464 Pfam PF00158 Sigma-54 interaction domain 145 312 1.1E-60 T 22-04-2016 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 SRM_RS06455 2a8ebf81736493766fdc05e2530e28a4 157 TIGRFAM TIGR01029 rpsG_bact: ribosomal protein uS7 5 156 2.4E-63 T 22-04-2016 IPR005717 Ribosomal protein S7, bacterial/organellar-type GO:0003735|GO:0006412|GO:0015935 SRM_RS06455 2a8ebf81736493766fdc05e2530e28a4 157 Pfam PF00177 Ribosomal protein S7p/S5e 1 150 1.0E-66 T 22-04-2016 IPR023798 Ribosomal protein S7 domain SRM_RS06455 2a8ebf81736493766fdc05e2530e28a4 157 PANTHER PTHR11205 8 157 1.4E-83 T 22-04-2016 IPR000235 Ribosomal protein S5/S7 GO:0006412 SRM_RS06455 2a8ebf81736493766fdc05e2530e28a4 157 PIRSF PIRSF002122 2 157 6.1E-60 T 22-04-2016 IPR000235 Ribosomal protein S5/S7 GO:0006412 SRM_RS06455 2a8ebf81736493766fdc05e2530e28a4 157 ProSitePatterns PS00052 Ribosomal protein S7 signature. 20 46 - T 22-04-2016 IPR020606 Ribosomal protein S7, conserved site GO:0003723|GO:0003735|GO:0006412 SRM_RS06455 2a8ebf81736493766fdc05e2530e28a4 157 Hamap MF_00480_B 30S ribosomal protein S7 [rpsG]. 1 157 35.712 T 22-04-2016 IPR005717 Ribosomal protein S7, bacterial/organellar-type GO:0003735|GO:0006412|GO:0015935 SRM_RS06455 2a8ebf81736493766fdc05e2530e28a4 157 Gene3D G3DSA:1.10.455.10 8 157 1.6E-64 T 22-04-2016 IPR023798 Ribosomal protein S7 domain SRM_RS06455 2a8ebf81736493766fdc05e2530e28a4 157 SUPERFAMILY SSF47973 7 150 2.09E-59 T 22-04-2016 IPR023798 Ribosomal protein S7 domain SRM_RS10625 59df969bd69491ee4e7016d46a28097f 307 SUPERFAMILY SSF51735 5 300 3.57E-81 T 22-04-2016 IPR016040 NAD(P)-binding domain SRM_RS10625 59df969bd69491ee4e7016d46a28097f 307 Gene3D G3DSA:3.90.25.10 241 283 4.7E-4 T 22-04-2016 SRM_RS10625 59df969bd69491ee4e7016d46a28097f 307 Pfam PF04321 RmlD substrate binding domain 5 299 1.6E-73 T 22-04-2016 IPR029903 RmlD-like substrate binding domain SRM_RS10625 59df969bd69491ee4e7016d46a28097f 307 Gene3D G3DSA:3.40.50.720 5 240 4.1E-59 T 22-04-2016 IPR016040 NAD(P)-binding domain SRM_RS10625 59df969bd69491ee4e7016d46a28097f 307 PANTHER PTHR10491 1 301 7.7E-99 T 22-04-2016 IPR005913 dTDP-4-dehydrorhamnose reductase family SRM_RS10625 59df969bd69491ee4e7016d46a28097f 307 TIGRFAM TIGR01214 rmlD: dTDP-4-dehydrorhamnose reductase 5 295 1.3E-70 T 22-04-2016 IPR005913 dTDP-4-dehydrorhamnose reductase family SRM_RS10625 59df969bd69491ee4e7016d46a28097f 307 PANTHER PTHR10491:SF4 1 301 7.7E-99 T 22-04-2016 SRM_RS06500 aa360d3cbf0c1d9f231b681046f34af2 121 Gene3D G3DSA:3.90.470.10 1 113 6.4E-31 T 22-04-2016 IPR001063 Ribosomal protein L22/L17 GO:0003735|GO:0005840|GO:0006412 SRM_RS06500 aa360d3cbf0c1d9f231b681046f34af2 121 PANTHER PTHR13501 1 109 1.9E-29 T 22-04-2016 IPR005727 Ribosomal protein L22, bacterial/chloroplast-type GO:0003735|GO:0006412|GO:0015934 SRM_RS06500 aa360d3cbf0c1d9f231b681046f34af2 121 TIGRFAM TIGR01044 rplV_bact: ribosomal protein uL22 5 109 5.6E-30 T 22-04-2016 IPR005727 Ribosomal protein L22, bacterial/chloroplast-type GO:0003735|GO:0006412|GO:0015934 SRM_RS06500 aa360d3cbf0c1d9f231b681046f34af2 121 Hamap MF_01331_B 50S ribosomal protein L22 [rplV]. 1 112 23.957 T 22-04-2016 IPR005727 Ribosomal protein L22, bacterial/chloroplast-type GO:0003735|GO:0006412|GO:0015934 SRM_RS06500 aa360d3cbf0c1d9f231b681046f34af2 121 Pfam PF00237 Ribosomal protein L22p/L17e 8 109 3.1E-23 T 22-04-2016 IPR001063 Ribosomal protein L22/L17 GO:0003735|GO:0005840|GO:0006412 SRM_RS06500 aa360d3cbf0c1d9f231b681046f34af2 121 SUPERFAMILY SSF54843 1 110 7.06E-31 T 22-04-2016 IPR001063 Ribosomal protein L22/L17 GO:0003735|GO:0005840|GO:0006412 SRM_RS06500 aa360d3cbf0c1d9f231b681046f34af2 121 PANTHER PTHR13501:SF0 1 109 1.9E-29 T 22-04-2016 SRM_RS06500 aa360d3cbf0c1d9f231b681046f34af2 121 ProSitePatterns PS00464 Ribosomal protein L22 signature. 85 109 - T 22-04-2016 IPR018260 Ribosomal protein L22/L17, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 SRM_RS04805 095b4ceae4e4c1863113778babd8726e 170 SUPERFAMILY SSF50249 3 170 2.26E-53 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold SRM_RS04805 095b4ceae4e4c1863113778babd8726e 170 Gene3D G3DSA:2.40.50.140 1 170 7.4E-49 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold SRM_RS04805 095b4ceae4e4c1863113778babd8726e 170 TIGRFAM TIGR00621 ssb: single-stranded DNA-binding protein 2 170 3.4E-48 T 22-04-2016 IPR011344 Single-stranded DNA-binding protein GO:0003697|GO:0006260 SRM_RS04805 095b4ceae4e4c1863113778babd8726e 170 Pfam PF00436 Single-strand binding protein family 5 107 1.9E-38 T 22-04-2016 IPR000424 Primosome PriB/single-strand DNA-binding GO:0003697 SRM_RS04805 095b4ceae4e4c1863113778babd8726e 170 Hamap MF_00984 Single-stranded DNA-binding protein. 5 112 32.735 T 22-04-2016 IPR011344 Single-stranded DNA-binding protein GO:0003697|GO:0006260 SRM_RS04805 095b4ceae4e4c1863113778babd8726e 170 PANTHER PTHR10302 1 170 2.8E-44 T 22-04-2016 IPR011344 Single-stranded DNA-binding protein GO:0003697|GO:0006260 SRM_RS07880 efc15a9cd39a695d996da8508363d0a6 293 SUPERFAMILY SSF53448 23 274 2.16E-28 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases SRM_RS07880 efc15a9cd39a695d996da8508363d0a6 293 PANTHER PTHR22572 24 168 3.1E-18 T 22-04-2016 SRM_RS07880 efc15a9cd39a695d996da8508363d0a6 293 Gene3D G3DSA:3.90.550.10 22 274 2.9E-31 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases SRM_RS07880 efc15a9cd39a695d996da8508363d0a6 293 Pfam PF12804 MobA-like NTP transferase domain 25 145 3.5E-9 T 22-04-2016 IPR025877 MobA-like NTP transferase SRM_RS13185 3164b0239027c972a15e4e5eda63f43a 746 Gene3D G3DSA:3.90.226.10 362 393 1.8E-4 T 22-04-2016 IPR029045 ClpP/crotonase-like domain SRM_RS13185 3164b0239027c972a15e4e5eda63f43a 746 TIGRFAM TIGR00706 SppA_dom: signal peptide peptidase SppA, 36K type 480 668 7.6E-57 T 22-04-2016 IPR004635 Peptidase S49, SppA GO:0006508|GO:0008233 SRM_RS13185 3164b0239027c972a15e4e5eda63f43a 746 PRINTS PR00127 Clp protease catalytic subunit P signature 498 518 1.5E-6 T 22-04-2016 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 SRM_RS13185 3164b0239027c972a15e4e5eda63f43a 746 PRINTS PR00127 Clp protease catalytic subunit P signature 637 656 1.5E-6 T 22-04-2016 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 SRM_RS13185 3164b0239027c972a15e4e5eda63f43a 746 PRINTS PR00127 Clp protease catalytic subunit P signature 530 547 1.5E-6 T 22-04-2016 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 SRM_RS13185 3164b0239027c972a15e4e5eda63f43a 746 TIGRFAM TIGR00705 SppA_67K: signal peptide peptidase SppA, 67K type 159 714 1.9E-118 T 22-04-2016 IPR004634 Peptidase S49, protease IV GO:0006465|GO:0008233|GO:0016021 SRM_RS13185 3164b0239027c972a15e4e5eda63f43a 746 Gene3D G3DSA:3.40.1750.10 296 361 2.0E-20 T 22-04-2016 SRM_RS13185 3164b0239027c972a15e4e5eda63f43a 746 Pfam PF01343 Peptidase family S49 523 673 3.2E-48 T 22-04-2016 IPR002142 Peptidase S49 GO:0006508|GO:0008233 SRM_RS13185 3164b0239027c972a15e4e5eda63f43a 746 Pfam PF01343 Peptidase family S49 265 418 1.2E-28 T 22-04-2016 IPR002142 Peptidase S49 GO:0006508|GO:0008233 SRM_RS13185 3164b0239027c972a15e4e5eda63f43a 746 Gene3D G3DSA:3.90.226.10 394 420 1.8E-22 T 22-04-2016 IPR029045 ClpP/crotonase-like domain SRM_RS13185 3164b0239027c972a15e4e5eda63f43a 746 Gene3D G3DSA:3.90.226.10 185 295 1.8E-22 T 22-04-2016 IPR029045 ClpP/crotonase-like domain SRM_RS13185 3164b0239027c972a15e4e5eda63f43a 746 SUPERFAMILY SSF52096 600 660 1.74E-39 T 22-04-2016 IPR029045 ClpP/crotonase-like domain SRM_RS13185 3164b0239027c972a15e4e5eda63f43a 746 SUPERFAMILY SSF52096 449 570 1.74E-39 T 22-04-2016 IPR029045 ClpP/crotonase-like domain SRM_RS13185 3164b0239027c972a15e4e5eda63f43a 746 Gene3D G3DSA:3.90.226.10 450 562 1.4E-55 T 22-04-2016 IPR029045 ClpP/crotonase-like domain SRM_RS13185 3164b0239027c972a15e4e5eda63f43a 746 Gene3D G3DSA:3.90.226.10 601 677 1.4E-55 T 22-04-2016 IPR029045 ClpP/crotonase-like domain SRM_RS13185 3164b0239027c972a15e4e5eda63f43a 746 SUPERFAMILY SSF52096 338 407 3.15E-20 T 22-04-2016 IPR029045 ClpP/crotonase-like domain SRM_RS13185 3164b0239027c972a15e4e5eda63f43a 746 SUPERFAMILY SSF52096 168 307 3.15E-20 T 22-04-2016 IPR029045 ClpP/crotonase-like domain SRM_RS13185 3164b0239027c972a15e4e5eda63f43a 746 PANTHER PTHR33209 130 674 1.5E-151 T 22-04-2016 SRM_RS13185 3164b0239027c972a15e4e5eda63f43a 746 PANTHER PTHR33209:SF1 130 674 1.5E-151 T 22-04-2016 SRM_RS12780 408c40b9668de4d12d187c80faae33ef 499 PANTHER PTHR32024 6 498 1.2E-118 T 22-04-2016 SRM_RS12780 408c40b9668de4d12d187c80faae33ef 499 PIRSF PIRSF006247 2 499 5.5E-171 T 22-04-2016 IPR004772 TrkH potassium transport family GO:0016021|GO:0022820|GO:0071805 SRM_RS12780 408c40b9668de4d12d187c80faae33ef 499 Pfam PF02386 Cation transport protein 50 493 1.9E-46 T 22-04-2016 IPR003445 Cation transporter GO:0006812|GO:0008324|GO:0055085 SRM_RS12780 408c40b9668de4d12d187c80faae33ef 499 PANTHER PTHR32024:SF2 6 498 1.2E-118 T 22-04-2016 SRM_RS15555 cb5fb35d149fa4731df838f0bc63776a 369 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 218 232 1.0E-5 T 22-04-2016 SRM_RS15555 cb5fb35d149fa4731df838f0bc63776a 369 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 286 298 1.0E-5 T 22-04-2016 SRM_RS15555 cb5fb35d149fa4731df838f0bc63776a 369 ProSitePatterns PS01261 Uncharacterized protein family UPF0020 signature. 220 231 - T 22-04-2016 IPR000241 Putative RNA methylase domain KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 SRM_RS15555 cb5fb35d149fa4731df838f0bc63776a 369 PANTHER PTHR14911:SF13 8 368 1.7E-60 T 22-04-2016 SRM_RS15555 cb5fb35d149fa4731df838f0bc63776a 369 Gene3D G3DSA:3.40.50.150 170 335 1.1E-35 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SRM_RS15555 cb5fb35d149fa4731df838f0bc63776a 369 Pfam PF02926 THUMP domain 86 176 8.1E-13 T 22-04-2016 IPR004114 THUMP domain GO:0003723 SRM_RS15555 cb5fb35d149fa4731df838f0bc63776a 369 SMART SM00981 89 178 6.4E-11 T 22-04-2016 IPR004114 THUMP domain GO:0003723 SRM_RS15555 cb5fb35d149fa4731df838f0bc63776a 369 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 289 295 - T 22-04-2016 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 SRM_RS15555 cb5fb35d149fa4731df838f0bc63776a 369 SUPERFAMILY SSF53335 170 329 2.37E-34 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SRM_RS15555 cb5fb35d149fa4731df838f0bc63776a 369 SUPERFAMILY SSF143437 59 179 1.36E-18 T 22-04-2016 SRM_RS15555 cb5fb35d149fa4731df838f0bc63776a 369 PANTHER PTHR14911 8 368 1.7E-60 T 22-04-2016 SRM_RS15555 cb5fb35d149fa4731df838f0bc63776a 369 Pfam PF01170 Putative RNA methylase family UPF0020 191 359 4.0E-31 T 22-04-2016 IPR000241 Putative RNA methylase domain KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 SRM_RS12610 db059a0ba547acc035a8f750938785cb 1092 SUPERFAMILY SSF52096 866 1088 9.77E-58 T 22-04-2016 IPR029045 ClpP/crotonase-like domain SRM_RS12610 db059a0ba547acc035a8f750938785cb 1092 SUPERFAMILY SSF52096 703 782 9.77E-58 T 22-04-2016 IPR029045 ClpP/crotonase-like domain SRM_RS12610 db059a0ba547acc035a8f750938785cb 1092 PANTHER PTHR32060 30 1088 7.8E-74 T 22-04-2016 SRM_RS12610 db059a0ba547acc035a8f750938785cb 1092 Gene3D G3DSA:2.30.42.10 784 866 7.3E-14 T 22-04-2016 IPR001478 PDZ domain GO:0005515 SRM_RS12610 db059a0ba547acc035a8f750938785cb 1092 Gene3D G3DSA:3.90.226.10 876 1089 9.6E-39 T 22-04-2016 IPR029045 ClpP/crotonase-like domain SRM_RS12610 db059a0ba547acc035a8f750938785cb 1092 Pfam PF14684 Tricorn protease C1 domain 705 773 2.4E-23 T 22-04-2016 IPR028204 Tricorn protease C1 domain SRM_RS12610 db059a0ba547acc035a8f750938785cb 1092 Gene3D G3DSA:2.120.10.60 589 697 8.9E-13 T 22-04-2016 SRM_RS12610 db059a0ba547acc035a8f750938785cb 1092 Gene3D G3DSA:2.120.10.60 322 561 7.1E-39 T 22-04-2016 SRM_RS12610 db059a0ba547acc035a8f750938785cb 1092 Gene3D G3DSA:2.120.10.60 36 310 1.5E-62 T 22-04-2016 SRM_RS12610 db059a0ba547acc035a8f750938785cb 1092 Pfam PF07676 WD40-like Beta Propeller Repeat 363 398 0.0019 T 22-04-2016 IPR011659 WD40-like Beta Propeller SRM_RS12610 db059a0ba547acc035a8f750938785cb 1092 Pfam PF07676 WD40-like Beta Propeller Repeat 600 633 0.0085 T 22-04-2016 IPR011659 WD40-like Beta Propeller SRM_RS12610 db059a0ba547acc035a8f750938785cb 1092 Pfam PF07676 WD40-like Beta Propeller Repeat 481 493 0.044 T 22-04-2016 IPR011659 WD40-like Beta Propeller SRM_RS12610 db059a0ba547acc035a8f750938785cb 1092 Pfam PF07676 WD40-like Beta Propeller Repeat 75 109 2.1E-9 T 22-04-2016 IPR011659 WD40-like Beta Propeller SRM_RS12610 db059a0ba547acc035a8f750938785cb 1092 Pfam PF07676 WD40-like Beta Propeller Repeat 519 550 4.6E-7 T 22-04-2016 IPR011659 WD40-like Beta Propeller SRM_RS12610 db059a0ba547acc035a8f750938785cb 1092 SMART SM00245 857 1065 3.2E-9 T 22-04-2016 IPR005151 Tail specific protease GO:0006508|GO:0008236 SRM_RS12610 db059a0ba547acc035a8f750938785cb 1092 SUPERFAMILY SSF82171 132 226 5.62E-37 T 22-04-2016 SRM_RS12610 db059a0ba547acc035a8f750938785cb 1092 SUPERFAMILY SSF82171 463 553 5.62E-37 T 22-04-2016 SRM_RS12610 db059a0ba547acc035a8f750938785cb 1092 SUPERFAMILY SSF82171 599 694 5.62E-37 T 22-04-2016 SRM_RS12610 db059a0ba547acc035a8f750938785cb 1092 SUPERFAMILY SSF82171 330 402 5.62E-37 T 22-04-2016 SRM_RS12610 db059a0ba547acc035a8f750938785cb 1092 Gene3D G3DSA:3.30.750.44 703 773 1.7E-23 T 22-04-2016 SRM_RS12610 db059a0ba547acc035a8f750938785cb 1092 PANTHER PTHR32060:SF12 30 1088 7.8E-74 T 22-04-2016 SRM_RS12610 db059a0ba547acc035a8f750938785cb 1092 SMART SM00228 785 856 3.3E-6 T 22-04-2016 IPR001478 PDZ domain GO:0005515 SRM_RS12610 db059a0ba547acc035a8f750938785cb 1092 SUPERFAMILY SSF69304 43 304 4.58E-36 T 22-04-2016 SRM_RS12610 db059a0ba547acc035a8f750938785cb 1092 Pfam PF00595 PDZ domain (Also known as DHR or GLGF) 783 832 1.2E-6 T 22-04-2016 IPR001478 PDZ domain GO:0005515 SRM_RS12610 db059a0ba547acc035a8f750938785cb 1092 SUPERFAMILY SSF50156 795 867 3.02E-11 T 22-04-2016 IPR001478 PDZ domain GO:0005515 SRM_RS12610 db059a0ba547acc035a8f750938785cb 1092 PIRSF PIRSF036421 30 1092 3.1E-175 T 22-04-2016 IPR012393 Tricorn protease GO:0008236 SRM_RS12610 db059a0ba547acc035a8f750938785cb 1092 Pfam PF03572 Peptidase family S41 894 1064 8.6E-24 T 22-04-2016 IPR005151 Tail specific protease GO:0006508|GO:0008236 SRM_RS09330 f22ac64d4eb39687098627fa8ad759f4 314 PANTHER PTHR20275 58 301 1.2E-80 T 22-04-2016 IPR002504 NAD kinase GO:0003951|GO:0006741|GO:0008152 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269 SRM_RS09330 f22ac64d4eb39687098627fa8ad759f4 314 Pfam PF01513 ATP-NAD kinase 62 271 5.5E-54 T 22-04-2016 IPR002504 NAD kinase GO:0003951|GO:0006741|GO:0008152 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269 SRM_RS09330 f22ac64d4eb39687098627fa8ad759f4 314 Gene3D G3DSA:3.40.50.10330 4 150 5.9E-27 T 22-04-2016 IPR017438 Inorganic polyphosphate/ATP-NAD kinase, domain 1 GO:0003951|GO:0008152 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269 SRM_RS09330 f22ac64d4eb39687098627fa8ad759f4 314 Gene3D G3DSA:2.60.200.30 151 257 1.3E-41 T 22-04-2016 IPR017437 ATP-NAD kinase, PpnK-type, all-beta GO:0003951|GO:0008152|GO:0019674 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269 SRM_RS09330 f22ac64d4eb39687098627fa8ad759f4 314 Hamap MF_00361 NAD kinase [nadK]. 1 287 31.035 T 22-04-2016 IPR002504 NAD kinase GO:0003951|GO:0006741|GO:0008152 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269 SRM_RS09330 f22ac64d4eb39687098627fa8ad759f4 314 SUPERFAMILY SSF111331 5 290 1.83E-76 T 22-04-2016 IPR016064 NAD kinase/diacylglycerol kinase-like domain SRM_RS00880 fc61fbbf8f618627b9c23667266113c0 188 ProSitePatterns PS00856 Guanylate kinase-like signature. 38 55 - T 22-04-2016 IPR020590 Guanylate kinase, conserved site KEGG: 00230+2.7.4.8|MetaCyc: PWY-7221 SRM_RS00880 fc61fbbf8f618627b9c23667266113c0 188 Pfam PF00625 Guanylate kinase 4 177 5.8E-40 T 22-04-2016 IPR008145 Guanylate kinase/L-type calcium channel beta subunit SRM_RS00880 fc61fbbf8f618627b9c23667266113c0 188 Gene3D G3DSA:3.40.50.300 2 46 7.7E-4 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SRM_RS00880 fc61fbbf8f618627b9c23667266113c0 188 PANTHER PTHR23117 1 184 2.8E-71 T 22-04-2016 SRM_RS00880 fc61fbbf8f618627b9c23667266113c0 188 SMART SM00072 3 186 2.1E-41 T 22-04-2016 IPR008145 Guanylate kinase/L-type calcium channel beta subunit SRM_RS00880 fc61fbbf8f618627b9c23667266113c0 188 Hamap MF_00328 Guanylate kinase [gmk]. 2 186 31.193 T 22-04-2016 IPR017665 Guanylate kinase GO:0004385|GO:0006163 KEGG: 00230+2.7.4.8|MetaCyc: PWY-7221 SRM_RS00880 fc61fbbf8f618627b9c23667266113c0 188 Gene3D G3DSA:3.30.63.10 47 86 5.8E-23 T 22-04-2016 SRM_RS00880 fc61fbbf8f618627b9c23667266113c0 188 SUPERFAMILY SSF52540 4 184 8.3E-54 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SRM_RS00880 fc61fbbf8f618627b9c23667266113c0 188 PANTHER PTHR23117:SF13 1 184 2.8E-71 T 22-04-2016 SRM_RS00880 fc61fbbf8f618627b9c23667266113c0 188 TIGRFAM TIGR03263 guanyl_kin: guanylate kinase 5 179 1.1E-59 T 22-04-2016 IPR017665 Guanylate kinase GO:0004385|GO:0006163 KEGG: 00230+2.7.4.8|MetaCyc: PWY-7221 SRM_RS00880 fc61fbbf8f618627b9c23667266113c0 188 Gene3D G3DSA:3.40.50.300 87 183 9.2E-36 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SRM_RS08980 093f8f5c484936f1aee72470238dade0 206 PANTHER PTHR10429:SF0 1 205 1.9E-65 T 22-04-2016 SRM_RS08980 093f8f5c484936f1aee72470238dade0 206 Pfam PF02245 Methylpurine-DNA glycosylase (MPG) 7 196 1.7E-58 T 22-04-2016 IPR003180 Methylpurine-DNA glycosylase (MPG) GO:0003677|GO:0003905|GO:0006284 SRM_RS08980 093f8f5c484936f1aee72470238dade0 206 Gene3D G3DSA:3.10.300.10 2 204 1.6E-66 T 22-04-2016 IPR003180 Methylpurine-DNA glycosylase (MPG) GO:0003677|GO:0003905|GO:0006284 SRM_RS08980 093f8f5c484936f1aee72470238dade0 206 SUPERFAMILY SSF50486 2 203 9.42E-57 T 22-04-2016 IPR011034 Formyl transferase, C-terminal-like GO:0003824 SRM_RS08980 093f8f5c484936f1aee72470238dade0 206 TIGRFAM TIGR00567 3mg: DNA-3-methyladenine glycosylase 4 200 3.4E-49 T 22-04-2016 IPR003180 Methylpurine-DNA glycosylase (MPG) GO:0003677|GO:0003905|GO:0006284 SRM_RS08980 093f8f5c484936f1aee72470238dade0 206 PANTHER PTHR10429 1 205 1.9E-65 T 22-04-2016 IPR003180 Methylpurine-DNA glycosylase (MPG) GO:0003677|GO:0003905|GO:0006284 SRM_RS08980 093f8f5c484936f1aee72470238dade0 206 Hamap MF_00527 Putative 3-methyladenine DNA glycosylase. 6 200 30.622 T 22-04-2016 IPR003180 Methylpurine-DNA glycosylase (MPG) GO:0003677|GO:0003905|GO:0006284 SRM_RS00810 c82041197715db1754e860a979e497ca 220 Pfam PF00149 Calcineurin-like phosphoesterase 4 189 6.7E-17 T 22-04-2016 IPR004843 Calcineurin-like phosphoesterase domain, apaH type GO:0016787 SRM_RS00810 c82041197715db1754e860a979e497ca 220 SUPERFAMILY SSF56300 1 194 2.67E-47 T 22-04-2016 IPR029052 Metallo-dependent phosphatase-like SRM_RS00810 c82041197715db1754e860a979e497ca 220 Gene3D G3DSA:3.60.21.10 2 216 4.7E-52 T 22-04-2016 IPR029052 Metallo-dependent phosphatase-like SRM_RS00810 c82041197715db1754e860a979e497ca 220 ProSitePatterns PS00125 Serine/threonine specific protein phosphatases signature. 63 68 - T 22-04-2016 IPR006186 Serine/threonine-specific protein phosphatase/bis(5-nucleosyl)-tetraphosphatase GO:0016787 KEGG: 04660+3.1.3.16 SRM_RS00810 c82041197715db1754e860a979e497ca 220 PANTHER PTHR24032 3 196 2.4E-29 T 22-04-2016 SRM_RS00810 c82041197715db1754e860a979e497ca 220 PANTHER PTHR24032:SF31 3 196 2.4E-29 T 22-04-2016 SRM_RS12160 8497d8f9ab0713fb913727e86c238875 348 Hamap MF_00435 Ketol-acid reductoisomerase [ilvC]. 1 326 43.135 T 22-04-2016 IPR013023 Ketol-acid reductoisomerase GO:0009082|GO:0016491|GO:0055114 KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 SRM_RS12160 8497d8f9ab0713fb913727e86c238875 348 SUPERFAMILY SSF51735 4 180 7.7E-69 T 22-04-2016 IPR016040 NAD(P)-binding domain SRM_RS12160 8497d8f9ab0713fb913727e86c238875 348 Pfam PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain 12 175 1.8E-72 T 22-04-2016 IPR013116 Acetohydroxy acid isomeroreductase, NADPH-binding domain KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 SRM_RS12160 8497d8f9ab0713fb913727e86c238875 348 Pfam PF01450 Acetohydroxy acid isomeroreductase, catalytic domain 181 324 4.7E-65 T 22-04-2016 IPR000506 Acetohydroxy acid isomeroreductase C-terminal GO:0004455|GO:0009082|GO:0055114 KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 SRM_RS12160 8497d8f9ab0713fb913727e86c238875 348 PANTHER PTHR21371 6 335 8.1E-181 T 22-04-2016 IPR013023 Ketol-acid reductoisomerase GO:0009082|GO:0016491|GO:0055114 KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 SRM_RS12160 8497d8f9ab0713fb913727e86c238875 348 Gene3D G3DSA:1.10.1040.10 27 323 6.1E-112 T 22-04-2016 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 SRM_RS12160 8497d8f9ab0713fb913727e86c238875 348 SUPERFAMILY SSF48179 181 330 3.74E-67 T 22-04-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 SRM_RS12160 8497d8f9ab0713fb913727e86c238875 348 TIGRFAM TIGR00465 ilvC: ketol-acid reductoisomerase 13 324 1.1E-130 T 22-04-2016 IPR013023 Ketol-acid reductoisomerase GO:0009082|GO:0016491|GO:0055114 KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 SRM_RS12865 4883ec30983db5425efedb7e79c62aec 404 Gene3D G3DSA:3.40.50.1100 72 321 5.3E-76 T 22-04-2016 SRM_RS12865 4883ec30983db5425efedb7e79c62aec 404 TIGRFAM TIGR01127 ilvA_1Cterm: threonine ammonia-lyase 24 401 1.9E-127 T 22-04-2016 IPR005789 Threonine dehydratase, catabolic GO:0004794|GO:0006567 KEGG: 00260+4.3.1.19|KEGG: 00290+4.3.1.19|UniPathway: UPA00052 SRM_RS12865 4883ec30983db5425efedb7e79c62aec 404 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 20 305 5.9E-82 T 22-04-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme SRM_RS12865 4883ec30983db5425efedb7e79c62aec 404 PANTHER PTHR10314 3 357 1.9E-137 T 22-04-2016 SRM_RS12865 4883ec30983db5425efedb7e79c62aec 404 Gene3D G3DSA:3.30.70.260 328 394 2.4E-10 T 22-04-2016 SRM_RS12865 4883ec30983db5425efedb7e79c62aec 404 SUPERFAMILY SSF53686 7 354 1.44E-91 T 22-04-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme SRM_RS12865 4883ec30983db5425efedb7e79c62aec 404 PANTHER PTHR10314:SF17 3 357 1.9E-137 T 22-04-2016 SRM_RS12585 47eac0f878ed8319daa66a454d5b15a8 198 Gene3D G3DSA:2.40.50.140 94 150 1.1E-9 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold SRM_RS12585 47eac0f878ed8319daa66a454d5b15a8 198 Pfam PF01957 NfeD-like C-terminal, partner-binding 13 150 9.8E-13 T 22-04-2016 IPR002810 NfeD-like, C-terminal domain SRM_RS12450 9c5264656d7eb13932118458d06db190 243 Gene3D G3DSA:3.40.50.1110 53 235 3.3E-47 T 22-04-2016 IPR013830 SGNH hydrolase-type esterase domain SRM_RS12450 9c5264656d7eb13932118458d06db190 243 SUPERFAMILY SSF52266 52 235 2.44E-45 T 22-04-2016 IPR013830 SGNH hydrolase-type esterase domain SRM_RS12450 9c5264656d7eb13932118458d06db190 243 Pfam PF13472 GDSL-like Lipase/Acylhydrolase family 57 221 8.4E-27 T 22-04-2016 IPR013830 SGNH hydrolase-type esterase domain SRM_RS12450 9c5264656d7eb13932118458d06db190 243 PANTHER PTHR30383 51 242 4.4E-41 T 22-04-2016 SRM_RS12450 9c5264656d7eb13932118458d06db190 243 PANTHER PTHR30383:SF5 51 242 4.4E-41 T 22-04-2016 SRM_RS10665 a19b01b565aca8a0ef0d8c6dd0e036f0 307 Gene3D G3DSA:2.120.10.30 39 290 2.2E-38 T 22-04-2016 IPR011042 Six-bladed beta-propeller, TolB-like SRM_RS10665 a19b01b565aca8a0ef0d8c6dd0e036f0 307 SUPERFAMILY SSF101898 37 296 6.02E-29 T 22-04-2016 SRM_RS10665 a19b01b565aca8a0ef0d8c6dd0e036f0 307 PANTHER PTHR24103 156 227 5.5E-15 T 22-04-2016 SRM_RS10665 a19b01b565aca8a0ef0d8c6dd0e036f0 307 PANTHER PTHR24103 43 140 5.5E-15 T 22-04-2016 SRM_RS10665 a19b01b565aca8a0ef0d8c6dd0e036f0 307 PANTHER PTHR24103:SF378 156 227 5.5E-15 T 22-04-2016 SRM_RS10665 a19b01b565aca8a0ef0d8c6dd0e036f0 307 PANTHER PTHR24103:SF378 43 140 5.5E-15 T 22-04-2016 SRM_RS09900 aee474fdfec8ae04115f4017a31f2211 570 SMART SM00567 E-Z type HEAT repeats 245 293 560.0 T 22-04-2016 IPR004155 PBS lyase HEAT-like repeat SRM_RS09900 aee474fdfec8ae04115f4017a31f2211 570 SMART SM00567 E-Z type HEAT repeats 201 243 460.0 T 22-04-2016 IPR004155 PBS lyase HEAT-like repeat SRM_RS09900 aee474fdfec8ae04115f4017a31f2211 570 SMART SM00567 E-Z type HEAT repeats 53 88 220.0 T 22-04-2016 IPR004155 PBS lyase HEAT-like repeat SRM_RS09900 aee474fdfec8ae04115f4017a31f2211 570 SMART SM00567 E-Z type HEAT repeats 165 199 270.0 T 22-04-2016 IPR004155 PBS lyase HEAT-like repeat SRM_RS09900 aee474fdfec8ae04115f4017a31f2211 570 SMART SM00567 E-Z type HEAT repeats 402 437 58.0 T 22-04-2016 IPR004155 PBS lyase HEAT-like repeat SRM_RS09900 aee474fdfec8ae04115f4017a31f2211 570 Gene3D G3DSA:1.25.10.10 370 561 2.0E-10 T 22-04-2016 IPR011989 Armadillo-like helical SRM_RS09900 aee474fdfec8ae04115f4017a31f2211 570 SUPERFAMILY SSF48371 36 559 1.34E-29 T 22-04-2016 IPR016024 Armadillo-type fold GO:0005488 SRM_RS09900 aee474fdfec8ae04115f4017a31f2211 570 Gene3D G3DSA:1.25.10.10 133 369 2.1E-18 T 22-04-2016 IPR011989 Armadillo-like helical SRM_RS09900 aee474fdfec8ae04115f4017a31f2211 570 Pfam PF13646 HEAT repeats 189 303 2.4E-8 T 22-04-2016 SRM_RS13545 c4aa02dbe4e16f61ac729b8ac2d8da34 397 PANTHER PTHR30605:SF0 7 395 1.6E-148 T 22-04-2016 SRM_RS13545 c4aa02dbe4e16f61ac729b8ac2d8da34 397 SUPERFAMILY SSF53067 15 36 1.13E-13 T 22-04-2016 SRM_RS13545 c4aa02dbe4e16f61ac729b8ac2d8da34 397 SUPERFAMILY SSF53067 162 352 1.13E-13 T 22-04-2016 SRM_RS13545 c4aa02dbe4e16f61ac729b8ac2d8da34 397 SUPERFAMILY SSF53067 79 124 1.13E-13 T 22-04-2016 SRM_RS13545 c4aa02dbe4e16f61ac729b8ac2d8da34 397 Gene3D G3DSA:3.30.420.40 14 218 2.6E-64 T 22-04-2016 SRM_RS13545 c4aa02dbe4e16f61ac729b8ac2d8da34 397 PANTHER PTHR30605 7 395 1.6E-148 T 22-04-2016 SRM_RS13545 c4aa02dbe4e16f61ac729b8ac2d8da34 397 Pfam PF03702 Uncharacterised protein family (UPF0075) 15 392 2.7E-103 T 22-04-2016 IPR005338 Anhydro-N-acetylmuramic acid kinase GO:0005524|GO:0006040|GO:0009254|GO:0016773 KEGG: 00040+2.7.1.17|UniPathway: UPA00343|UniPathway: UPA00544 SRM_RS13545 c4aa02dbe4e16f61ac729b8ac2d8da34 397 Hamap MF_01270 Anhydro-N-acetylmuramic acid kinase [anmK]. 13 395 38.279 T 22-04-2016 IPR005338 Anhydro-N-acetylmuramic acid kinase GO:0005524|GO:0006040|GO:0009254|GO:0016773 KEGG: 00040+2.7.1.17|UniPathway: UPA00343|UniPathway: UPA00544 SRM_RS05430 f644ed7287a3355c1585def229a24576 824 Pfam PF00282 Pyridoxal-dependent decarboxylase conserved domain 289 393 7.9E-14 T 22-04-2016 IPR002129 Pyridoxal phosphate-dependent decarboxylase GO:0016831|GO:0019752|GO:0030170 SRM_RS05430 f644ed7287a3355c1585def229a24576 824 Pfam PF00282 Pyridoxal-dependent decarboxylase conserved domain 428 536 7.9E-7 T 22-04-2016 IPR002129 Pyridoxal phosphate-dependent decarboxylase GO:0016831|GO:0019752|GO:0030170 SRM_RS05430 f644ed7287a3355c1585def229a24576 824 SUPERFAMILY SSF53383 277 393 1.36E-69 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase SRM_RS05430 f644ed7287a3355c1585def229a24576 824 SUPERFAMILY SSF53383 22 186 1.36E-69 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase SRM_RS05430 f644ed7287a3355c1585def229a24576 824 SUPERFAMILY SSF53383 421 598 1.36E-69 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase SRM_RS05430 f644ed7287a3355c1585def229a24576 824 SUPERFAMILY SSF53383 629 646 1.36E-69 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase SRM_RS05430 f644ed7287a3355c1585def229a24576 824 PANTHER PTHR11999 281 412 4.8E-68 T 22-04-2016 SRM_RS05430 f644ed7287a3355c1585def229a24576 824 PANTHER PTHR11999 162 195 4.8E-68 T 22-04-2016 SRM_RS05430 f644ed7287a3355c1585def229a24576 824 PANTHER PTHR11999 53 143 4.8E-68 T 22-04-2016 SRM_RS05430 f644ed7287a3355c1585def229a24576 824 PANTHER PTHR11999 436 536 4.8E-68 T 22-04-2016 SRM_RS05430 f644ed7287a3355c1585def229a24576 824 ProSitePatterns PS00392 DDC / GAD / HDC / TyrDC pyridoxal-phosphate attachment site. 437 458 - T 22-04-2016 IPR021115 Pyridoxal-phosphate binding site GO:0016831 SRM_RS05430 f644ed7287a3355c1585def229a24576 824 Gene3D G3DSA:3.40.640.10 102 186 4.4E-76 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 SRM_RS05430 f644ed7287a3355c1585def229a24576 824 Gene3D G3DSA:3.40.640.10 270 503 4.4E-76 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 SRM_RS05430 f644ed7287a3355c1585def229a24576 824 PANTHER PTHR11999:SF5 281 412 4.8E-68 T 22-04-2016 SRM_RS05430 f644ed7287a3355c1585def229a24576 824 PANTHER PTHR11999:SF5 162 195 4.8E-68 T 22-04-2016 SRM_RS05430 f644ed7287a3355c1585def229a24576 824 PANTHER PTHR11999:SF5 53 143 4.8E-68 T 22-04-2016 SRM_RS05430 f644ed7287a3355c1585def229a24576 824 PANTHER PTHR11999:SF5 436 536 4.8E-68 T 22-04-2016 SRM_RS02520 15962067726325ceff1f18d307bdc7ba 399 PANTHER PTHR10632:SF2 3 398 7.5E-190 T 22-04-2016 SRM_RS02520 15962067726325ceff1f18d307bdc7ba 399 SUPERFAMILY SSF51905 5 148 6.48E-28 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SRM_RS02520 15962067726325ceff1f18d307bdc7ba 399 PANTHER PTHR10632 3 398 7.5E-190 T 22-04-2016 SRM_RS02520 15962067726325ceff1f18d307bdc7ba 399 SUPERFAMILY SSF51905 127 260 5.27E-22 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SRM_RS02520 15962067726325ceff1f18d307bdc7ba 399 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 6 121 7.7E-7 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SRM_RS02520 15962067726325ceff1f18d307bdc7ba 399 Gene3D G3DSA:3.50.50.60 5 118 7.5E-51 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SRM_RS02520 15962067726325ceff1f18d307bdc7ba 399 Gene3D G3DSA:3.50.50.60 261 329 7.5E-51 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SRM_RS06780 b59563a15770bb4c5408d7443e7012c4 862 SMART SM00437 278 552 8.8E-107 T 22-04-2016 IPR003602 DNA topoisomerase, type IA, DNA-binding domain GO:0003677|GO:0003916|GO:0006265 SRM_RS06780 b59563a15770bb4c5408d7443e7012c4 862 PANTHER PTHR11390:SF27 1 211 2.3E-245 T 22-04-2016 SRM_RS06780 b59563a15770bb4c5408d7443e7012c4 862 PANTHER PTHR11390:SF27 235 726 2.3E-245 T 22-04-2016 SRM_RS06780 b59563a15770bb4c5408d7443e7012c4 862 Pfam PF01751 Toprim domain 4 126 4.3E-24 T 22-04-2016 IPR006171 Toprim domain SRM_RS06780 b59563a15770bb4c5408d7443e7012c4 862 Pfam PF13368 Topoisomerase C-terminal repeat 804 855 1.7E-19 T 22-04-2016 IPR025589 Topoisomerase C-terminal repeat SRM_RS06780 b59563a15770bb4c5408d7443e7012c4 862 Pfam PF13368 Topoisomerase C-terminal repeat 743 794 7.3E-20 T 22-04-2016 IPR025589 Topoisomerase C-terminal repeat SRM_RS06780 b59563a15770bb4c5408d7443e7012c4 862 Pfam PF13368 Topoisomerase C-terminal repeat 682 741 2.3E-9 T 22-04-2016 IPR025589 Topoisomerase C-terminal repeat SRM_RS06780 b59563a15770bb4c5408d7443e7012c4 862 Gene3D G3DSA:1.10.460.10 498 594 4.0E-49 T 22-04-2016 IPR013824 DNA topoisomerase, type IA, central region, subdomain 1 SRM_RS06780 b59563a15770bb4c5408d7443e7012c4 862 Gene3D G3DSA:1.10.460.10 148 195 4.0E-49 T 22-04-2016 IPR013824 DNA topoisomerase, type IA, central region, subdomain 1 SRM_RS06780 b59563a15770bb4c5408d7443e7012c4 862 PANTHER PTHR11390 1 211 2.3E-245 T 22-04-2016 IPR000380 DNA topoisomerase, type IA GO:0003677|GO:0003917|GO:0006265 SRM_RS06780 b59563a15770bb4c5408d7443e7012c4 862 PANTHER PTHR11390 235 726 2.3E-245 T 22-04-2016 IPR000380 DNA topoisomerase, type IA GO:0003677|GO:0003917|GO:0006265 SRM_RS06780 b59563a15770bb4c5408d7443e7012c4 862 Hamap MF_00952 DNA topoisomerase 1 [topA]. 2 755 49.609 T 22-04-2016 IPR028612 DNA topoisomerase I, type IA GO:0003677|GO:0003916|GO:0006265 SRM_RS06780 b59563a15770bb4c5408d7443e7012c4 862 ProSitePatterns PS00396 Prokaryotic DNA topoisomerase I active site. 315 329 - T 22-04-2016 IPR023406 DNA topoisomerase, type IA, active site GO:0003917 SRM_RS06780 b59563a15770bb4c5408d7443e7012c4 862 SMART SM00493 2 117 3.9E-33 T 22-04-2016 IPR006171 Toprim domain SRM_RS06780 b59563a15770bb4c5408d7443e7012c4 862 SMART SM00436 117 205 2.0E-43 T 22-04-2016 IPR003601 DNA topoisomerase, type IA, domain 2 GO:0003677|GO:0003916|GO:0006265 SRM_RS06780 b59563a15770bb4c5408d7443e7012c4 862 Pfam PF01131 DNA topoisomerase 141 589 3.7E-117 T 22-04-2016 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 SRM_RS06780 b59563a15770bb4c5408d7443e7012c4 862 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 320 329 1.6E-33 T 22-04-2016 IPR000380 DNA topoisomerase, type IA GO:0003677|GO:0003917|GO:0006265 SRM_RS06780 b59563a15770bb4c5408d7443e7012c4 862 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 396 412 1.6E-33 T 22-04-2016 IPR000380 DNA topoisomerase, type IA GO:0003677|GO:0003917|GO:0006265 SRM_RS06780 b59563a15770bb4c5408d7443e7012c4 862 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 515 529 1.6E-33 T 22-04-2016 IPR000380 DNA topoisomerase, type IA GO:0003677|GO:0003917|GO:0006265 SRM_RS06780 b59563a15770bb4c5408d7443e7012c4 862 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 175 193 1.6E-33 T 22-04-2016 IPR000380 DNA topoisomerase, type IA GO:0003677|GO:0003917|GO:0006265 SRM_RS06780 b59563a15770bb4c5408d7443e7012c4 862 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 91 104 1.6E-33 T 22-04-2016 IPR000380 DNA topoisomerase, type IA GO:0003677|GO:0003917|GO:0006265 SRM_RS06780 b59563a15770bb4c5408d7443e7012c4 862 Gene3D G3DSA:3.40.50.140 1 147 2.6E-44 T 22-04-2016 IPR006171 Toprim domain SRM_RS06780 b59563a15770bb4c5408d7443e7012c4 862 TIGRFAM TIGR01051 topA_bact: DNA topoisomerase I 4 647 4.9E-223 T 22-04-2016 IPR005733 DNA topoisomerase I, bacterial-type GO:0003677|GO:0003917|GO:0006265 SRM_RS06780 b59563a15770bb4c5408d7443e7012c4 862 Gene3D G3DSA:2.70.20.10 345 478 1.4E-20 T 22-04-2016 IPR013825 DNA topoisomerase, type IA, central region, subdomain 2 SRM_RS06780 b59563a15770bb4c5408d7443e7012c4 862 Gene3D G3DSA:2.70.20.10 197 342 1.4E-23 T 22-04-2016 IPR013825 DNA topoisomerase, type IA, central region, subdomain 2 SRM_RS06780 b59563a15770bb4c5408d7443e7012c4 862 SUPERFAMILY SSF56712 1 596 5.76E-172 T 22-04-2016 IPR023405 DNA topoisomerase, type IA, core domain SRM_RS05310 e9d133bea9c497cf9d8cae9f01a5ca7e 315 SMART SM01400 10 125 1.2E-69 T 22-04-2016 SRM_RS05310 e9d133bea9c497cf9d8cae9f01a5ca7e 315 Pfam PF13793 N-terminal domain of ribose phosphate pyrophosphokinase 11 125 1.5E-44 T 22-04-2016 IPR029099 Ribose-phosphate pyrophosphokinase, N-terminal domain KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1|UniPathway: UPA00087 SRM_RS05310 e9d133bea9c497cf9d8cae9f01a5ca7e 315 SUPERFAMILY SSF53271 74 304 1.03E-59 T 22-04-2016 IPR029057 Phosphoribosyltransferase-like SRM_RS05310 e9d133bea9c497cf9d8cae9f01a5ca7e 315 TIGRFAM TIGR01251 ribP_PPkin: ribose-phosphate diphosphokinase 11 314 6.1E-118 T 22-04-2016 IPR005946 Ribose-phosphate diphosphokinase GO:0000287|GO:0004749|GO:0009165 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1|UniPathway: UPA00087 SRM_RS05310 e9d133bea9c497cf9d8cae9f01a5ca7e 315 Pfam PF14572 Phosphoribosyl synthetase-associated domain 206 313 1.1E-26 T 22-04-2016 IPR005946 Ribose-phosphate diphosphokinase GO:0000287|GO:0004749|GO:0009165 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1|UniPathway: UPA00087 SRM_RS05310 e9d133bea9c497cf9d8cae9f01a5ca7e 315 Gene3D G3DSA:3.40.50.2020 165 282 1.7E-48 T 22-04-2016 IPR029057 Phosphoribosyltransferase-like SRM_RS05310 e9d133bea9c497cf9d8cae9f01a5ca7e 315 PANTHER PTHR10210 2 315 5.9E-157 T 22-04-2016 SRM_RS05310 e9d133bea9c497cf9d8cae9f01a5ca7e 315 Hamap MF_00583_B Ribose-phosphate pyrophosphokinase [prs]. 10 314 44.755 T 22-04-2016 IPR005946 Ribose-phosphate diphosphokinase GO:0000287|GO:0004749|GO:0009165 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1|UniPathway: UPA00087 SRM_RS05310 e9d133bea9c497cf9d8cae9f01a5ca7e 315 Gene3D G3DSA:3.40.50.2020 6 164 2.5E-67 T 22-04-2016 IPR029057 Phosphoribosyltransferase-like SRM_RS05615 a4b4ee705056ba6457d82dd02229bb92 282 SUPERFAMILY SSF53474 7 281 6.24E-58 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold SRM_RS05615 a4b4ee705056ba6457d82dd02229bb92 282 PRINTS PR00412 Epoxide hydrolase signature 257 279 9.8E-5 T 22-04-2016 IPR000639 Epoxide hydrolase-like GO:0003824 SRM_RS05615 a4b4ee705056ba6457d82dd02229bb92 282 PRINTS PR00412 Epoxide hydrolase signature 36 54 9.8E-5 T 22-04-2016 IPR000639 Epoxide hydrolase-like GO:0003824 SRM_RS05615 a4b4ee705056ba6457d82dd02229bb92 282 PRINTS PR00412 Epoxide hydrolase signature 100 113 9.8E-5 T 22-04-2016 IPR000639 Epoxide hydrolase-like GO:0003824 SRM_RS05615 a4b4ee705056ba6457d82dd02229bb92 282 PRINTS PR00412 Epoxide hydrolase signature 114 127 9.8E-5 T 22-04-2016 IPR000639 Epoxide hydrolase-like GO:0003824 SRM_RS05615 a4b4ee705056ba6457d82dd02229bb92 282 Gene3D G3DSA:3.40.50.1820 8 281 1.7E-58 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold SRM_RS05615 a4b4ee705056ba6457d82dd02229bb92 282 PRINTS PR00111 Alpha/beta hydrolase fold signature 225 239 2.7E-11 T 22-04-2016 IPR000073 Alpha/beta hydrolase fold-1 SRM_RS05615 a4b4ee705056ba6457d82dd02229bb92 282 PRINTS PR00111 Alpha/beta hydrolase fold signature 100 113 2.7E-11 T 22-04-2016 IPR000073 Alpha/beta hydrolase fold-1 SRM_RS05615 a4b4ee705056ba6457d82dd02229bb92 282 PRINTS PR00111 Alpha/beta hydrolase fold signature 114 127 2.7E-11 T 22-04-2016 IPR000073 Alpha/beta hydrolase fold-1 SRM_RS05615 a4b4ee705056ba6457d82dd02229bb92 282 PRINTS PR00111 Alpha/beta hydrolase fold signature 55 70 2.7E-11 T 22-04-2016 IPR000073 Alpha/beta hydrolase fold-1 SRM_RS05615 a4b4ee705056ba6457d82dd02229bb92 282 Pfam PF00561 alpha/beta hydrolase fold 30 264 2.2E-22 T 22-04-2016 IPR000073 Alpha/beta hydrolase fold-1 SRM_RS05615 a4b4ee705056ba6457d82dd02229bb92 282 PANTHER PTHR10992 11 282 4.6E-41 T 22-04-2016 SRM_RS09140 e2c7b414a869b3423096367a85153461 513 Pfam PF03806 AbgT putative transporter family 17 511 1.9E-193 T 22-04-2016 IPR004697 p-aminobenzoyl-glutamate transport protein AbgT GO:0015558|GO:1902604 SRM_RS09140 e2c7b414a869b3423096367a85153461 513 PANTHER PTHR30282 3 512 3.9E-225 T 22-04-2016 SRM_RS09140 e2c7b414a869b3423096367a85153461 513 PANTHER PTHR30282:SF0 3 512 3.9E-225 T 22-04-2016 IPR004697 p-aminobenzoyl-glutamate transport protein AbgT GO:0015558|GO:1902604 SRM_RS13660 7b488ab48f58e33025ee2efb60ed700d 266 Gene3D G3DSA:3.60.21.10 1 131 2.4E-14 T 22-04-2016 IPR029052 Metallo-dependent phosphatase-like SRM_RS13660 7b488ab48f58e33025ee2efb60ed700d 266 Gene3D G3DSA:3.60.21.10 166 238 2.4E-14 T 22-04-2016 IPR029052 Metallo-dependent phosphatase-like SRM_RS13660 7b488ab48f58e33025ee2efb60ed700d 266 SUPERFAMILY SSF56300 165 256 1.2E-27 T 22-04-2016 IPR029052 Metallo-dependent phosphatase-like SRM_RS13660 7b488ab48f58e33025ee2efb60ed700d 266 SUPERFAMILY SSF56300 1 125 1.2E-27 T 22-04-2016 IPR029052 Metallo-dependent phosphatase-like SRM_RS13660 7b488ab48f58e33025ee2efb60ed700d 266 PANTHER PTHR37844 1 266 2.7E-32 T 22-04-2016 SRM_RS13660 7b488ab48f58e33025ee2efb60ed700d 266 Pfam PF00149 Calcineurin-like phosphoesterase 1 233 1.2E-14 T 22-04-2016 IPR004843 Calcineurin-like phosphoesterase domain, apaH type GO:0016787 SRM_RS05835 2d01719839d72b44e2f2edddd32bf33b 76 PRINTS PR00124 ATP synthase C subunit signature 31 46 8.7E-16 T 22-04-2016 IPR000454 ATPase, F0 complex, subunit C GO:0015078|GO:0015986|GO:0045263 SRM_RS05835 2d01719839d72b44e2f2edddd32bf33b 76 PRINTS PR00124 ATP synthase C subunit signature 10 29 8.7E-16 T 22-04-2016 IPR000454 ATPase, F0 complex, subunit C GO:0015078|GO:0015986|GO:0045263 SRM_RS05835 2d01719839d72b44e2f2edddd32bf33b 76 PRINTS PR00124 ATP synthase C subunit signature 48 73 8.7E-16 T 22-04-2016 IPR000454 ATPase, F0 complex, subunit C GO:0015078|GO:0015986|GO:0045263 SRM_RS05835 2d01719839d72b44e2f2edddd32bf33b 76 PANTHER PTHR10031 4 76 3.8E-15 T 22-04-2016 SRM_RS05835 2d01719839d72b44e2f2edddd32bf33b 76 Hamap MF_01396 ATP synthase subunit c [atpH]. 7 75 15.485 T 22-04-2016 SRM_RS05835 2d01719839d72b44e2f2edddd32bf33b 76 SUPERFAMILY SSF81333 4 73 1.57E-18 T 22-04-2016 IPR002379 V-ATPase proteolipid subunit C-like domain GO:0015078|GO:0015991|GO:0033177 SRM_RS05835 2d01719839d72b44e2f2edddd32bf33b 76 Pfam PF00137 ATP synthase subunit C 9 72 1.1E-12 T 22-04-2016 IPR002379 V-ATPase proteolipid subunit C-like domain GO:0015078|GO:0015991|GO:0033177 SRM_RS05835 2d01719839d72b44e2f2edddd32bf33b 76 ProSitePatterns PS00605 ATP synthase c subunit signature. 38 59 - T 22-04-2016 IPR020537 ATPase, F0 complex, subunit C, DCCD-binding site SRM_RS05835 2d01719839d72b44e2f2edddd32bf33b 76 TIGRFAM TIGR01260 ATP_synt_c: ATP synthase F0, C subunit 19 73 6.9E-15 T 22-04-2016 IPR005953 ATPase, F0 complex, subunit C, bacterial/chloroplast GO:0015078|GO:0015986|GO:0045263 SRM_RS05835 2d01719839d72b44e2f2edddd32bf33b 76 Gene3D G3DSA:1.20.20.10 8 73 3.6E-21 T 22-04-2016 IPR000454 ATPase, F0 complex, subunit C GO:0015078|GO:0015986|GO:0045263 SRM_RS14760 9f23b1300beb30d711e4f588fdee1404 301 Pfam PF01066 CDP-alcohol phosphatidyltransferase 135 193 4.1E-10 T 22-04-2016 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 SRM_RS14760 9f23b1300beb30d711e4f588fdee1404 301 ProSitePatterns PS00379 CDP-alcohol phosphatidyltransferases signature. 174 196 - T 22-04-2016 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 SRM_RS13145 8109d2fb7967fd75a72b4b717529ef35 422 Gene3D G3DSA:2.30.39.10 221 305 7.4E-44 T 22-04-2016 SRM_RS13145 8109d2fb7967fd75a72b4b717529ef35 422 Gene3D G3DSA:2.30.39.10 370 419 7.4E-44 T 22-04-2016 SRM_RS13145 8109d2fb7967fd75a72b4b717529ef35 422 PANTHER PTHR11461 1 422 1.4E-120 T 22-04-2016 IPR000215 Serpin family GO:0005615 SRM_RS13145 8109d2fb7967fd75a72b4b717529ef35 422 ProSitePatterns PS00284 Serpins signature. 392 402 - T 22-04-2016 IPR023795 Serpin, conserved site SRM_RS13145 8109d2fb7967fd75a72b4b717529ef35 422 SMART SM00093 62 419 7.4E-85 T 22-04-2016 IPR023796 Serpin domain SRM_RS13145 8109d2fb7967fd75a72b4b717529ef35 422 Pfam PF00079 Serpin (serine protease inhibitor) 56 419 7.4E-105 T 22-04-2016 IPR023796 Serpin domain SRM_RS13145 8109d2fb7967fd75a72b4b717529ef35 422 Gene3D G3DSA:3.30.497.10 318 369 1.2E-61 T 22-04-2016 SRM_RS13145 8109d2fb7967fd75a72b4b717529ef35 422 Gene3D G3DSA:3.30.497.10 58 220 1.2E-61 T 22-04-2016 SRM_RS13145 8109d2fb7967fd75a72b4b717529ef35 422 SUPERFAMILY SSF56574 21 419 4.71E-106 T 22-04-2016 IPR023796 Serpin domain SRM_RS00940 04260ae65dcdedb16a3716cace5fcf78 334 Gene3D G3DSA:3.40.47.10 10 169 1.4E-64 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 SRM_RS00940 04260ae65dcdedb16a3716cace5fcf78 334 PANTHER PTHR34069:SF2 7 334 3.4E-127 T 22-04-2016 SRM_RS00940 04260ae65dcdedb16a3716cace5fcf78 334 Hamap MF_01815 3-oxoacyl-[acyl-carrier-protein] synthase 3 [fabH]. 9 331 67.17 T 22-04-2016 IPR004655 3-oxoacyl-[acyl-carrier-protein] synthase 3 GO:0004315|GO:0006633 KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381|UniPathway: UPA00094 SRM_RS00940 04260ae65dcdedb16a3716cace5fcf78 334 Pfam PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III 115 189 4.3E-30 T 22-04-2016 IPR013751 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III GO:0004315|GO:0006633 KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381|UniPathway: UPA00094 SRM_RS00940 04260ae65dcdedb16a3716cace5fcf78 334 PANTHER PTHR34069 7 334 3.4E-127 T 22-04-2016 SRM_RS00940 04260ae65dcdedb16a3716cace5fcf78 334 TIGRFAM TIGR00747 fabH: 3-oxoacyl-[acyl-carrier-protein] synthase III 10 328 2.8E-117 T 22-04-2016 IPR004655 3-oxoacyl-[acyl-carrier-protein] synthase 3 GO:0004315|GO:0006633 KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381|UniPathway: UPA00094 SRM_RS00940 04260ae65dcdedb16a3716cace5fcf78 334 Pfam PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal 244 331 6.7E-30 T 22-04-2016 IPR013747 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III, C-terminal KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381|UniPathway: UPA00094 SRM_RS00940 04260ae65dcdedb16a3716cace5fcf78 334 Gene3D G3DSA:3.40.47.10 170 331 1.0E-48 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 SRM_RS00940 04260ae65dcdedb16a3716cace5fcf78 334 SUPERFAMILY SSF53901 9 331 1.55E-67 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 SRM_RS08855 0bdc627eedc8b6615cfdfd62fd8a80b6 875 SUPERFAMILY SSF109604 564 766 9.71E-16 T 22-04-2016 SRM_RS08855 0bdc627eedc8b6615cfdfd62fd8a80b6 875 PANTHER PTHR36442 83 786 7.1E-154 T 22-04-2016 SRM_RS08855 0bdc627eedc8b6615cfdfd62fd8a80b6 875 TIGRFAM TIGR00277 HDIG: HDIG domain 563 660 4.3E-23 T 22-04-2016 IPR006675 HDIG domain SRM_RS08855 0bdc627eedc8b6615cfdfd62fd8a80b6 875 Gene3D G3DSA:1.10.3210.10 559 738 2.7E-22 T 22-04-2016 IPR006674 HD domain SRM_RS08855 0bdc627eedc8b6615cfdfd62fd8a80b6 875 SMART SM00471 561 720 9.1E-12 T 22-04-2016 IPR003607 HD/PDEase domain SRM_RS08855 0bdc627eedc8b6615cfdfd62fd8a80b6 875 Pfam PF07697 7TM-HD extracellular 73 341 4.2E-18 T 22-04-2016 IPR011624 Metal-dependent phosphohydrolase, 7TM extracellular domain SRM_RS08855 0bdc627eedc8b6615cfdfd62fd8a80b6 875 Pfam PF01966 HD domain 566 710 3.1E-17 T 22-04-2016 IPR006674 HD domain SRM_RS08855 0bdc627eedc8b6615cfdfd62fd8a80b6 875 Pfam PF07698 7TM receptor with intracellular HD hydrolase 356 540 2.1E-32 T 22-04-2016 IPR011621 Metal-dependent phosphohydrolase, 7TM intracellular domain SRM_RS10700 86b282d2416e8160e2f2c100ed9230cc 1019 SUPERFAMILY SSF52540 1 217 1.29E-20 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SRM_RS10700 86b282d2416e8160e2f2c100ed9230cc 1019 SUPERFAMILY SSF52540 246 298 1.29E-20 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SRM_RS10700 86b282d2416e8160e2f2c100ed9230cc 1019 SUPERFAMILY SSF52540 328 339 1.29E-20 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SRM_RS10700 86b282d2416e8160e2f2c100ed9230cc 1019 PANTHER PTHR32114 2 1019 5.9E-79 T 22-04-2016 IPR027050 Nuclease SbcCD subunit C GO:0004518|GO:0006281 SRM_RS10700 86b282d2416e8160e2f2c100ed9230cc 1019 Pfam PF13558 Putative exonuclease SbcCD, C subunit 907 976 1.8E-9 T 22-04-2016 SRM_RS10700 86b282d2416e8160e2f2c100ed9230cc 1019 PANTHER PTHR32114:SF2 2 1019 5.9E-79 T 22-04-2016 SRM_RS10700 86b282d2416e8160e2f2c100ed9230cc 1019 Gene3D G3DSA:3.40.50.300 3 161 3.9E-22 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SRM_RS10700 86b282d2416e8160e2f2c100ed9230cc 1019 SUPERFAMILY SSF52540 756 1010 7.38E-23 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SRM_RS10700 86b282d2416e8160e2f2c100ed9230cc 1019 Gene3D G3DSA:3.40.50.300 872 993 7.3E-10 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SRM_RS10700 86b282d2416e8160e2f2c100ed9230cc 1019 SUPERFAMILY SSF75712 473 564 5.89E-8 T 22-04-2016 SRM_RS10700 86b282d2416e8160e2f2c100ed9230cc 1019 Gene3D G3DSA:1.10.287.510 465 579 5.7E-14 T 22-04-2016 SRM_RS03880 a7b47ed3766b55acc034a0a15103eb8f 611 PANTHER PTHR10283:SF79 358 382 1.6E-108 T 22-04-2016 SRM_RS03880 a7b47ed3766b55acc034a0a15103eb8f 611 Pfam PF02080 TrkA-C domain 317 375 1.1E-11 T 22-04-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 SRM_RS03880 a7b47ed3766b55acc034a0a15103eb8f 611 Pfam PF02080 TrkA-C domain 224 281 5.1E-10 T 22-04-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 SRM_RS03880 a7b47ed3766b55acc034a0a15103eb8f 611 PANTHER PTHR10283 13 212 1.6E-108 T 22-04-2016 SRM_RS03880 a7b47ed3766b55acc034a0a15103eb8f 611 PANTHER PTHR10283 266 288 1.6E-108 T 22-04-2016 SRM_RS03880 a7b47ed3766b55acc034a0a15103eb8f 611 PANTHER PTHR10283:SF79 266 288 1.6E-108 T 22-04-2016 SRM_RS03880 a7b47ed3766b55acc034a0a15103eb8f 611 PANTHER PTHR10283 358 382 1.6E-108 T 22-04-2016 SRM_RS03880 a7b47ed3766b55acc034a0a15103eb8f 611 SUPERFAMILY SSF116726 220 295 4.32E-13 T 22-04-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 SRM_RS03880 a7b47ed3766b55acc034a0a15103eb8f 611 PANTHER PTHR10283:SF79 13 212 1.6E-108 T 22-04-2016 SRM_RS03880 a7b47ed3766b55acc034a0a15103eb8f 611 ProSitePatterns PS01271 Sodium:sulfate symporter family signature. 560 576 - T 22-04-2016 IPR031312 Sodium/sulphate symporter, conserved site SRM_RS03880 a7b47ed3766b55acc034a0a15103eb8f 611 Gene3D G3DSA:3.30.70.1450 317 376 3.4E-16 T 22-04-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 SRM_RS03880 a7b47ed3766b55acc034a0a15103eb8f 611 Gene3D G3DSA:3.30.70.1450 221 294 4.8E-12 T 22-04-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 SRM_RS03880 a7b47ed3766b55acc034a0a15103eb8f 611 PANTHER PTHR10283:SF79 399 610 1.6E-108 T 22-04-2016 SRM_RS03880 a7b47ed3766b55acc034a0a15103eb8f 611 PANTHER PTHR10283 399 610 1.6E-108 T 22-04-2016 SRM_RS03880 a7b47ed3766b55acc034a0a15103eb8f 611 SUPERFAMILY SSF116726 316 382 3.66E-15 T 22-04-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 SRM_RS03880 a7b47ed3766b55acc034a0a15103eb8f 611 Pfam PF03600 Citrate transporter 36 552 8.4E-32 T 22-04-2016 IPR004680 Citrate transporter-like domain GO:0016021|GO:0055085 SRM_RS06350 d6e4198c534ec1bbb4b72e9b09dad7b4 518 Pfam PF00082 Subtilase family 173 440 1.5E-20 T 22-04-2016 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 SRM_RS06350 d6e4198c534ec1bbb4b72e9b09dad7b4 518 PANTHER PTHR10795 160 328 1.2E-27 T 22-04-2016 IPR015500 Peptidase S8, subtilisin-related SRM_RS06350 d6e4198c534ec1bbb4b72e9b09dad7b4 518 PANTHER PTHR10795 369 471 1.2E-27 T 22-04-2016 IPR015500 Peptidase S8, subtilisin-related SRM_RS06350 d6e4198c534ec1bbb4b72e9b09dad7b4 518 Gene3D G3DSA:3.40.50.200 140 470 2.8E-46 T 22-04-2016 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 SRM_RS06350 d6e4198c534ec1bbb4b72e9b09dad7b4 518 ProSitePatterns PS00138 Serine proteases, subtilase family, serine active site. 402 412 - T 22-04-2016 IPR023828 Peptidase S8, subtilisin, Ser-active site SRM_RS06350 d6e4198c534ec1bbb4b72e9b09dad7b4 518 PANTHER PTHR10795:SF368 160 328 1.2E-27 T 22-04-2016 SRM_RS06350 d6e4198c534ec1bbb4b72e9b09dad7b4 518 PANTHER PTHR10795:SF368 369 471 1.2E-27 T 22-04-2016 SRM_RS06350 d6e4198c534ec1bbb4b72e9b09dad7b4 518 SUPERFAMILY SSF52743 158 472 9.69E-47 T 22-04-2016 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 SRM_RS06350 d6e4198c534ec1bbb4b72e9b09dad7b4 518 PRINTS PR00723 Subtilisin serine protease family (S8) signature 401 417 8.2E-8 T 22-04-2016 IPR015500 Peptidase S8, subtilisin-related SRM_RS06350 d6e4198c534ec1bbb4b72e9b09dad7b4 518 PRINTS PR00723 Subtilisin serine protease family (S8) signature 211 224 8.2E-8 T 22-04-2016 IPR015500 Peptidase S8, subtilisin-related SRM_RS06350 d6e4198c534ec1bbb4b72e9b09dad7b4 518 PRINTS PR00723 Subtilisin serine protease family (S8) signature 171 190 8.2E-8 T 22-04-2016 IPR015500 Peptidase S8, subtilisin-related SRM_RS10555 5f2e10eea1fdc13191762590e8d56cd1 344 PANTHER PTHR30221:SF7 73 319 1.6E-57 T 22-04-2016 SRM_RS10555 5f2e10eea1fdc13191762590e8d56cd1 344 PANTHER PTHR30221 73 319 1.6E-57 T 22-04-2016 SRM_RS10555 5f2e10eea1fdc13191762590e8d56cd1 344 SUPERFAMILY SSF82861 71 151 6.15E-11 T 22-04-2016 IPR011014 Mechanosensitive ion channel MscS, transmembrane-2 GO:0016020 SRM_RS10555 5f2e10eea1fdc13191762590e8d56cd1 344 Gene3D G3DSA:3.30.70.100 223 306 7.4E-20 T 22-04-2016 SRM_RS10555 5f2e10eea1fdc13191762590e8d56cd1 344 SUPERFAMILY SSF82689 220 317 9.29E-25 T 22-04-2016 IPR011066 Mechanosensitive ion channel MscS, C-terminal GO:0016020 SRM_RS10555 5f2e10eea1fdc13191762590e8d56cd1 344 SUPERFAMILY SSF50182 152 218 3.07E-17 T 22-04-2016 IPR010920 LSM domain SRM_RS10555 5f2e10eea1fdc13191762590e8d56cd1 344 Pfam PF00924 Mechanosensitive ion channel 110 308 3.7E-47 T 22-04-2016 IPR006685 Mechanosensitive ion channel MscS GO:0016020|GO:0055085 SRM_RS10555 5f2e10eea1fdc13191762590e8d56cd1 344 Gene3D G3DSA:2.30.30.60 168 216 1.3E-17 T 22-04-2016 SRM_RS11345 c353dc17be8a00f62d572178c58d6246 719 PANTHER PTHR38469 59 719 2.3E-45 T 22-04-2016 SRM_RS11345 c353dc17be8a00f62d572178c58d6246 719 PANTHER PTHR38469:SF1 59 719 2.3E-45 T 22-04-2016 SRM_RS11345 c353dc17be8a00f62d572178c58d6246 719 SUPERFAMILY SSF50494 225 327 2.27E-9 T 22-04-2016 IPR009003 Peptidase S1, PA clan SRM_RS11345 c353dc17be8a00f62d572178c58d6246 719 SUPERFAMILY SSF50494 114 138 2.27E-9 T 22-04-2016 IPR009003 Peptidase S1, PA clan SRM_RS11345 c353dc17be8a00f62d572178c58d6246 719 SUPERFAMILY SSF50494 637 672 2.27E-9 T 22-04-2016 IPR009003 Peptidase S1, PA clan SRM_RS11345 c353dc17be8a00f62d572178c58d6246 719 Pfam PF10459 Peptidase S46 78 709 8.7E-132 T 22-04-2016 IPR019500 Peptidase S46 GO:0008239|GO:0070009 SRM_RS05735 c0ba99da4b781dc5a4bcdd44eb8411fa 1019 PANTHER PTHR30441 27 213 9.0E-23 T 22-04-2016 SRM_RS05735 c0ba99da4b781dc5a4bcdd44eb8411fa 1019 Pfam PF05170 AsmA family 41 215 6.3E-13 T 22-04-2016 IPR007844 AsmA SRM_RS05735 c0ba99da4b781dc5a4bcdd44eb8411fa 1019 Pfam PF13502 AsmA-like C-terminal region 726 983 5.7E-13 T 22-04-2016 IPR032712 AsmA-like, C-terminal SRM_RS14725 fe604aa7e44894d405f15ddd5046658a 114 TIGRFAM TIGR01068 thioredoxin: thioredoxin 11 108 4.3E-39 T 22-04-2016 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 SRM_RS14725 fe604aa7e44894d405f15ddd5046658a 114 PANTHER PTHR10438 6 110 7.6E-44 T 22-04-2016 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 SRM_RS14725 fe604aa7e44894d405f15ddd5046658a 114 Pfam PF00085 Thioredoxin 7 107 8.8E-36 T 22-04-2016 IPR013766 Thioredoxin domain GO:0045454 SRM_RS14725 fe604aa7e44894d405f15ddd5046658a 114 SUPERFAMILY SSF52833 3 112 2.79E-42 T 22-04-2016 IPR012336 Thioredoxin-like fold SRM_RS14725 fe604aa7e44894d405f15ddd5046658a 114 PRINTS PR00421 Thioredoxin family signature 74 85 4.7E-10 T 22-04-2016 SRM_RS14725 fe604aa7e44894d405f15ddd5046658a 114 PRINTS PR00421 Thioredoxin family signature 34 43 4.7E-10 T 22-04-2016 SRM_RS14725 fe604aa7e44894d405f15ddd5046658a 114 PRINTS PR00421 Thioredoxin family signature 26 34 4.7E-10 T 22-04-2016 SRM_RS14725 fe604aa7e44894d405f15ddd5046658a 114 PIRSF PIRSF000077 4 110 8.1E-43 T 22-04-2016 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 SRM_RS14725 fe604aa7e44894d405f15ddd5046658a 114 ProSitePatterns PS00194 Thioredoxin family active site. 27 45 - T 22-04-2016 IPR017937 Thioredoxin, conserved site GO:0045454 SRM_RS14725 fe604aa7e44894d405f15ddd5046658a 114 Gene3D G3DSA:3.40.30.10 3 111 2.5E-43 T 22-04-2016 IPR012336 Thioredoxin-like fold SRM_RS08725 3ff9e74088d0b13fe343d41ee0a9a1d3 508 SUPERFAMILY SSF54631 107 216 1.39E-33 T 22-04-2016 SRM_RS08725 3ff9e74088d0b13fe343d41ee0a9a1d3 508 SMART SM00116 171 219 1.2E-9 T 22-04-2016 IPR000644 CBS domain SRM_RS08725 3ff9e74088d0b13fe343d41ee0a9a1d3 508 SMART SM00116 110 158 6.9E-12 T 22-04-2016 IPR000644 CBS domain SRM_RS08725 3ff9e74088d0b13fe343d41ee0a9a1d3 508 PANTHER PTHR11911 313 508 2.0E-229 T 22-04-2016 SRM_RS08725 3ff9e74088d0b13fe343d41ee0a9a1d3 508 PANTHER PTHR11911 6 295 2.0E-229 T 22-04-2016 SRM_RS08725 3ff9e74088d0b13fe343d41ee0a9a1d3 508 ProSitePatterns PS00487 IMP dehydrogenase / GMP reductase signature. 309 321 - T 22-04-2016 IPR015875 IMP dehydrogenase / GMP reductase, conserved site GO:0016491|GO:0055114 Reactome: REACT_1698 SRM_RS08725 3ff9e74088d0b13fe343d41ee0a9a1d3 508 PIRSF PIRSF000130 12 502 3.9E-204 T 22-04-2016 IPR005990 Inosine-5'-monophosphate dehydrogenase GO:0003938|GO:0006164|GO:0055114 KEGG: 00053+1.1.1.20|KEGG: 00230+1.1.1.205|KEGG: 00983+1.1.1.205|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-7221|Reactome: REACT_1698|UniPathway: UPA00601 SRM_RS08725 3ff9e74088d0b13fe343d41ee0a9a1d3 508 TIGRFAM TIGR01302 IMP_dehydrog: inosine-5'-monophosphate dehydrogenase 22 468 2.1E-188 T 22-04-2016 IPR005990 Inosine-5'-monophosphate dehydrogenase GO:0003938|GO:0006164|GO:0055114 KEGG: 00053+1.1.1.20|KEGG: 00230+1.1.1.205|KEGG: 00983+1.1.1.205|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-7221|Reactome: REACT_1698|UniPathway: UPA00601 SRM_RS08725 3ff9e74088d0b13fe343d41ee0a9a1d3 508 SUPERFAMILY SSF51412 18 104 3.66E-120 T 22-04-2016 SRM_RS08725 3ff9e74088d0b13fe343d41ee0a9a1d3 508 SUPERFAMILY SSF51412 230 492 3.66E-120 T 22-04-2016 SRM_RS08725 3ff9e74088d0b13fe343d41ee0a9a1d3 508 PANTHER PTHR11911:SF6 313 508 2.0E-229 T 22-04-2016 IPR005990 Inosine-5'-monophosphate dehydrogenase GO:0003938|GO:0006164|GO:0055114 KEGG: 00053+1.1.1.20|KEGG: 00230+1.1.1.205|KEGG: 00983+1.1.1.205|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-7221|Reactome: REACT_1698|UniPathway: UPA00601 SRM_RS08725 3ff9e74088d0b13fe343d41ee0a9a1d3 508 PANTHER PTHR11911:SF6 6 295 2.0E-229 T 22-04-2016 IPR005990 Inosine-5'-monophosphate dehydrogenase GO:0003938|GO:0006164|GO:0055114 KEGG: 00053+1.1.1.20|KEGG: 00230+1.1.1.205|KEGG: 00983+1.1.1.205|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-7221|Reactome: REACT_1698|UniPathway: UPA00601 SRM_RS08725 3ff9e74088d0b13fe343d41ee0a9a1d3 508 Gene3D G3DSA:3.20.20.70 16 499 6.7E-198 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 SRM_RS08725 3ff9e74088d0b13fe343d41ee0a9a1d3 508 Hamap MF_01964 Inosine-5'-monophosphate dehydrogenase [guaB]. 22 501 87.691 T 22-04-2016 IPR005990 Inosine-5'-monophosphate dehydrogenase GO:0003938|GO:0006164|GO:0055114 KEGG: 00053+1.1.1.20|KEGG: 00230+1.1.1.205|KEGG: 00983+1.1.1.205|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-7221|Reactome: REACT_1698|UniPathway: UPA00601 SRM_RS08725 3ff9e74088d0b13fe343d41ee0a9a1d3 508 Pfam PF00478 IMP dehydrogenase / GMP reductase domain 22 488 7.5E-160 T 22-04-2016 IPR001093 IMP dehydrogenase/GMP reductase GO:0003824|GO:0055114 Reactome: REACT_1698 SRM_RS08725 3ff9e74088d0b13fe343d41ee0a9a1d3 508 Pfam PF00571 CBS domain 110 157 3.5E-12 T 22-04-2016 IPR000644 CBS domain SRM_RS08725 3ff9e74088d0b13fe343d41ee0a9a1d3 508 Pfam PF00571 CBS domain 164 218 1.0E-10 T 22-04-2016 IPR000644 CBS domain SRM_RS08725 3ff9e74088d0b13fe343d41ee0a9a1d3 508 SMART SM01240 21 488 0.0 T 22-04-2016 SRM_RS13425 ce9b58236bb90f46a5c79a95ea4afcb8 529 Gene3D G3DSA:1.10.3720.10 316 518 1.9E-26 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 SRM_RS13425 ce9b58236bb90f46a5c79a95ea4afcb8 529 Gene3D G3DSA:1.10.3720.10 7 256 7.9E-43 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 SRM_RS13425 ce9b58236bb90f46a5c79a95ea4afcb8 529 PANTHER PTHR30193 3 266 4.2E-54 T 22-04-2016 SRM_RS13425 ce9b58236bb90f46a5c79a95ea4afcb8 529 SUPERFAMILY SSF161098 5 256 1.21E-43 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 SRM_RS13425 ce9b58236bb90f46a5c79a95ea4afcb8 529 PANTHER PTHR30193:SF3 3 266 4.2E-54 T 22-04-2016 SRM_RS13425 ce9b58236bb90f46a5c79a95ea4afcb8 529 SUPERFAMILY SSF161098 280 514 3.66E-32 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 SRM_RS13425 ce9b58236bb90f46a5c79a95ea4afcb8 529 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 345 511 3.0E-11 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 SRM_RS13425 ce9b58236bb90f46a5c79a95ea4afcb8 529 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 83 244 6.1E-11 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 SRM_RS04945 41f4c344fc3110de9e9e5fcf010d8551 460 PIRSF PIRSF000167 2 455 1.2E-167 T 22-04-2016 IPR004558 Coproporphyrinogen III oxidase, oxygen-independent, HemN GO:0004109|GO:0005737|GO:0006779|GO:0055114 KEGG: 00860+1.3.99.22|UniPathway: UPA00251 SRM_RS04945 41f4c344fc3110de9e9e5fcf010d8551 460 PANTHER PTHR13932:SF6 1 452 6.5E-203 T 22-04-2016 SRM_RS04945 41f4c344fc3110de9e9e5fcf010d8551 460 TIGRFAM TIGR00538 hemN: oxygen-independent coproporphyrinogen III oxidase 2 447 7.7E-174 T 22-04-2016 IPR004558 Coproporphyrinogen III oxidase, oxygen-independent, HemN GO:0004109|GO:0005737|GO:0006779|GO:0055114 KEGG: 00860+1.3.99.22|UniPathway: UPA00251 SRM_RS04945 41f4c344fc3110de9e9e5fcf010d8551 460 SMART SM00729 51 272 8.0E-51 T 22-04-2016 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 SRM_RS04945 41f4c344fc3110de9e9e5fcf010d8551 460 PANTHER PTHR13932 1 452 6.5E-203 T 22-04-2016 SRM_RS04945 41f4c344fc3110de9e9e5fcf010d8551 460 SUPERFAMILY SSF102114 3 445 4.84E-130 T 22-04-2016 SRM_RS04945 41f4c344fc3110de9e9e5fcf010d8551 460 Pfam PF06969 HemN C-terminal domain 365 432 4.4E-10 T 22-04-2016 IPR010723 HemN, C-terminal SRM_RS04945 41f4c344fc3110de9e9e5fcf010d8551 460 Gene3D G3DSA:3.80.30.20 52 247 1.8E-25 T 22-04-2016 IPR023404 Radical SAM, alpha/beta horseshoe SRM_RS04945 41f4c344fc3110de9e9e5fcf010d8551 460 Pfam PF04055 Radical SAM superfamily 57 226 9.1E-18 T 22-04-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 SRM_RS09400 b19f210dc7e7ef1903ed0c34430fc2a9 412 PANTHER PTHR11766:SF1 5 412 1.8E-194 T 22-04-2016 SRM_RS09400 b19f210dc7e7ef1903ed0c34430fc2a9 412 SUPERFAMILY SSF55174 302 404 1.68E-16 T 22-04-2016 SRM_RS09400 b19f210dc7e7ef1903ed0c34430fc2a9 412 SUPERFAMILY SSF52374 7 317 8.45E-82 T 22-04-2016 SRM_RS09400 b19f210dc7e7ef1903ed0c34430fc2a9 412 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 167 182 8.2E-23 T 22-04-2016 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1|Reactome: REACT_71 SRM_RS09400 b19f210dc7e7ef1903ed0c34430fc2a9 412 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 52 74 8.2E-23 T 22-04-2016 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1|Reactome: REACT_71 SRM_RS09400 b19f210dc7e7ef1903ed0c34430fc2a9 412 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 184 206 8.2E-23 T 22-04-2016 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1|Reactome: REACT_71 SRM_RS09400 b19f210dc7e7ef1903ed0c34430fc2a9 412 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 217 229 8.2E-23 T 22-04-2016 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1|Reactome: REACT_71 SRM_RS09400 b19f210dc7e7ef1903ed0c34430fc2a9 412 Gene3D G3DSA:3.40.50.620 12 233 1.5E-75 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold SRM_RS09400 b19f210dc7e7ef1903ed0c34430fc2a9 412 PANTHER PTHR11766 5 412 1.8E-194 T 22-04-2016 IPR024088 Tyrosine-tRNA ligase, bacterial-type GO:0004831 KEGG: 00970+6.1.1.1 SRM_RS09400 b19f210dc7e7ef1903ed0c34430fc2a9 412 Pfam PF00579 tRNA synthetases class I (W and Y) 38 318 4.4E-68 T 22-04-2016 IPR002305 Aminoacyl-tRNA synthetase, class Ic GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 SRM_RS09400 b19f210dc7e7ef1903ed0c34430fc2a9 412 Gene3D G3DSA:3.10.290.10 331 404 2.8E-21 T 22-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 SRM_RS09400 b19f210dc7e7ef1903ed0c34430fc2a9 412 Hamap MF_02007 Tyrosine--tRNA ligase [tyrS]. 4 405 45.948 T 22-04-2016 IPR024108 Tyrosine-tRNA ligase, bacterial-type, type 2 GO:0004831 KEGG: 00970+6.1.1.1 SRM_RS09400 b19f210dc7e7ef1903ed0c34430fc2a9 412 Gene3D G3DSA:1.10.240.10 234 330 3.6E-30 T 22-04-2016 SRM_RS09400 b19f210dc7e7ef1903ed0c34430fc2a9 412 TIGRFAM TIGR00234 tyrS: tyrosine--tRNA ligase 9 404 1.1E-110 T 22-04-2016 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1|Reactome: REACT_71 SRM_RS02220 7e9c681f0c7f997791ffeff223653d77 207 PANTHER PTHR33446 127 200 2.1E-14 T 22-04-2016 SRM_RS02220 7e9c681f0c7f997791ffeff223653d77 207 SUPERFAMILY SSF74653 124 198 1.27E-17 T 22-04-2016 SRM_RS02220 7e9c681f0c7f997791ffeff223653d77 207 Pfam PF03544 Gram-negative bacterial TonB protein C-terminal 126 200 2.1E-16 T 22-04-2016 IPR006260 TonB, C-terminal GO:0006810 SRM_RS02220 7e9c681f0c7f997791ffeff223653d77 207 Gene3D G3DSA:3.30.1150.10 108 201 7.2E-11 T 22-04-2016 SRM_RS14320 a9ee2c7e5ad7041e77097ff4620ed018 503 Gene3D G3DSA:3.80.30.20 187 421 3.7E-82 T 22-04-2016 IPR023404 Radical SAM, alpha/beta horseshoe SRM_RS14320 a9ee2c7e5ad7041e77097ff4620ed018 503 Hamap MF_01864 tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase [miaB]. 42 483 70.781 T 22-04-2016 IPR006463 tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase MiaB GO:0005737|GO:0006400|GO:0016740|GO:0051539 SRM_RS14320 a9ee2c7e5ad7041e77097ff4620ed018 503 Pfam PF00919 Uncharacterized protein family UPF0004 44 143 6.2E-30 T 22-04-2016 IPR013848 Methylthiotransferase, N-terminal GO:0003824|GO:0009451|GO:0051539 SRM_RS14320 a9ee2c7e5ad7041e77097ff4620ed018 503 PANTHER PTHR11918:SF43 8 499 2.7E-218 T 22-04-2016 SRM_RS14320 a9ee2c7e5ad7041e77097ff4620ed018 503 SMART SM00729 188 409 1.4E-54 T 22-04-2016 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 SRM_RS14320 a9ee2c7e5ad7041e77097ff4620ed018 503 TIGRFAM TIGR00089 TIGR00089: radical SAM methylthiotransferase, MiaB/RimO family 44 479 6.0E-137 T 22-04-2016 IPR005839 Methylthiotransferase GO:0016740|GO:0043412|GO:0051539 SRM_RS14320 a9ee2c7e5ad7041e77097ff4620ed018 503 Pfam PF04055 Radical SAM superfamily 192 365 1.6E-30 T 22-04-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 SRM_RS14320 a9ee2c7e5ad7041e77097ff4620ed018 503 PANTHER PTHR11918 8 499 2.7E-218 T 22-04-2016 IPR023970 Methylthiotransferase/radical SAM-type protein SRM_RS14320 a9ee2c7e5ad7041e77097ff4620ed018 503 Pfam PF01938 TRAM domain 421 481 4.0E-13 T 22-04-2016 IPR002792 TRAM domain SRM_RS14320 a9ee2c7e5ad7041e77097ff4620ed018 503 TIGRFAM TIGR01574 miaB-methiolase: tRNA-i(6)A37 thiotransferase enzyme MiaB 44 480 2.2E-143 T 22-04-2016 SRM_RS14320 a9ee2c7e5ad7041e77097ff4620ed018 503 SUPERFAMILY SSF102114 182 414 1.7E-60 T 22-04-2016 SRM_RS14320 a9ee2c7e5ad7041e77097ff4620ed018 503 ProSitePatterns PS01278 Methylthiotransferase radical SAM domain signature. 192 212 - T 22-04-2016 IPR020612 Methylthiotransferase, conserved site GO:0051539 SRM_RS10445 f2d8f2b869ef05402ebab0a0a0fdeea9 134 Pfam PF01641 SelR domain 14 131 2.6E-54 T 22-04-2016 IPR002579 Peptide methionine sulphoxide reductase MrsB GO:0033743|GO:0055114 SRM_RS10445 f2d8f2b869ef05402ebab0a0a0fdeea9 134 Hamap MF_01400 Peptide methionine sulfoxide reductase MsrB [msrB]. 7 133 35.221 T 22-04-2016 IPR002579 Peptide methionine sulphoxide reductase MrsB GO:0033743|GO:0055114 SRM_RS10445 f2d8f2b869ef05402ebab0a0a0fdeea9 134 SUPERFAMILY SSF51316 9 132 3.49E-57 T 22-04-2016 IPR011057 Mss4-like SRM_RS10445 f2d8f2b869ef05402ebab0a0a0fdeea9 134 Gene3D G3DSA:2.170.150.20 8 132 2.4E-59 T 22-04-2016 IPR002579 Peptide methionine sulphoxide reductase MrsB GO:0033743|GO:0055114 SRM_RS10445 f2d8f2b869ef05402ebab0a0a0fdeea9 134 PANTHER PTHR10173 10 134 1.5E-66 T 22-04-2016 IPR028427 Peptide methionine sulfoxide reductase GO:0006979|GO:0016671|GO:0030091 SRM_RS10445 f2d8f2b869ef05402ebab0a0a0fdeea9 134 TIGRFAM TIGR00357 TIGR00357: methionine-R-sulfoxide reductase 9 130 6.3E-57 T 22-04-2016 IPR002579 Peptide methionine sulphoxide reductase MrsB GO:0033743|GO:0055114 SRM_RS10445 f2d8f2b869ef05402ebab0a0a0fdeea9 134 PANTHER PTHR10173:SF18 10 134 1.5E-66 T 22-04-2016 SRM_RS04880 e76574979be084ae531cd111c094af98 204 SUPERFAMILY SSF75169 85 204 2.8E-15 T 22-04-2016 IPR027396 DsrEFH-like SRM_RS04880 e76574979be084ae531cd111c094af98 204 Gene3D G3DSA:3.40.1260.10 87 204 1.1E-22 T 22-04-2016 IPR027396 DsrEFH-like SRM_RS04880 e76574979be084ae531cd111c094af98 204 Pfam PF02635 DsrE/DsrF-like family 88 204 2.4E-8 T 22-04-2016 IPR003787 Sulphur relay, DsrE/F-like protein SRM_RS02470 5e01c8bdb05a64330182266733a435fb 226 Gene3D G3DSA:3.40.50.300 1 215 1.5E-54 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SRM_RS02470 5e01c8bdb05a64330182266733a435fb 226 PANTHER PTHR24220 3 209 1.6E-63 T 22-04-2016 SRM_RS02470 5e01c8bdb05a64330182266733a435fb 226 SUPERFAMILY SSF52540 1 215 2.85E-52 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SRM_RS02470 5e01c8bdb05a64330182266733a435fb 226 Pfam PF00005 ABC transporter 17 155 1.5E-27 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 SRM_RS02470 5e01c8bdb05a64330182266733a435fb 226 SMART SM00382 26 205 3.3E-13 T 22-04-2016 IPR003593 AAA+ ATPase domain SRM_RS14915 540c7dcc10bccd4be8ff83be7c9e8b54 427 Hamap MF_00323 Ferrochelatase [hemH]. 38 375 32.647 T 22-04-2016 IPR001015 Ferrochelatase GO:0004325|GO:0006783 KEGG: 00860+4.99.1.1|UniPathway: UPA00252 SRM_RS14915 540c7dcc10bccd4be8ff83be7c9e8b54 427 PANTHER PTHR11108:SF1 40 376 7.4E-102 T 22-04-2016 SRM_RS14915 540c7dcc10bccd4be8ff83be7c9e8b54 427 Pfam PF00762 Ferrochelatase 40 374 3.6E-105 T 22-04-2016 IPR001015 Ferrochelatase GO:0004325|GO:0006783 KEGG: 00860+4.99.1.1|UniPathway: UPA00252 SRM_RS14915 540c7dcc10bccd4be8ff83be7c9e8b54 427 PANTHER PTHR11108 40 376 7.4E-102 T 22-04-2016 IPR001015 Ferrochelatase GO:0004325|GO:0006783 KEGG: 00860+4.99.1.1|UniPathway: UPA00252 SRM_RS14915 540c7dcc10bccd4be8ff83be7c9e8b54 427 Gene3D G3DSA:3.40.50.1400 39 266 8.3E-60 T 22-04-2016 SRM_RS14915 540c7dcc10bccd4be8ff83be7c9e8b54 427 Gene3D G3DSA:3.40.50.1400 267 376 3.0E-18 T 22-04-2016 SRM_RS14915 540c7dcc10bccd4be8ff83be7c9e8b54 427 SUPERFAMILY SSF53800 39 405 1.64E-90 T 22-04-2016 SRM_RS14915 540c7dcc10bccd4be8ff83be7c9e8b54 427 TIGRFAM TIGR00109 hemH: ferrochelatase 39 375 4.0E-85 T 22-04-2016 IPR001015 Ferrochelatase GO:0004325|GO:0006783 KEGG: 00860+4.99.1.1|UniPathway: UPA00252 SRM_RS11830 b04099eb0aae5a4b74b60c029d19cfdd 392 Gene3D G3DSA:3.40.50.720 122 265 4.9E-43 T 22-04-2016 IPR016040 NAD(P)-binding domain SRM_RS11830 b04099eb0aae5a4b74b60c029d19cfdd 392 PANTHER PTHR10996:SF111 4 292 1.4E-104 T 22-04-2016 SRM_RS11830 b04099eb0aae5a4b74b60c029d19cfdd 392 Pfam PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain 27 287 9.3E-16 T 22-04-2016 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GO:0008152|GO:0016616|GO:0051287|GO:0055114 SRM_RS11830 b04099eb0aae5a4b74b60c029d19cfdd 392 SUPERFAMILY SSF51735 94 264 7.41E-40 T 22-04-2016 IPR016040 NAD(P)-binding domain SRM_RS11830 b04099eb0aae5a4b74b60c029d19cfdd 392 PANTHER PTHR10996 4 292 1.4E-104 T 22-04-2016 SRM_RS11830 b04099eb0aae5a4b74b60c029d19cfdd 392 Hamap MF_01825 Erythronate-4-phosphate dehydrogenase [pdxB]. 4 373 43.404 T 22-04-2016 IPR020921 Erythronate-4-phosphate dehydrogenase GO:0005737|GO:0008615|GO:0033711|GO:0055114 KEGG: 00260+1.1.1.29|KEGG: 00630+1.1.1.29|KEGG: 00680+1.1.1.29|KEGG: 00750+1.1.1.290|MetaCyc: PWY-181|UniPathway: UPA00244 SRM_RS11830 b04099eb0aae5a4b74b60c029d19cfdd 392 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 112 263 4.3E-38 T 22-04-2016 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 SRM_RS11830 b04099eb0aae5a4b74b60c029d19cfdd 392 Gene3D G3DSA:3.40.50.720 29 121 9.7E-22 T 22-04-2016 IPR016040 NAD(P)-binding domain SRM_RS11830 b04099eb0aae5a4b74b60c029d19cfdd 392 Pfam PF11890 Domain of unknown function (DUF3410) 322 373 1.3E-7 T 22-04-2016 IPR024531 Erythronate-4-phosphate dehydrogenase, dimerisation domain GO:0046983 KEGG: 00260+1.1.1.29|KEGG: 00630+1.1.1.29|KEGG: 00680+1.1.1.29|KEGG: 00750+1.1.1.290|MetaCyc: PWY-181|UniPathway: UPA00244 SRM_RS11830 b04099eb0aae5a4b74b60c029d19cfdd 392 SUPERFAMILY SSF52283 8 113 1.66E-19 T 22-04-2016 SRM_RS12470 a4462c639c4ea7bed32308c663cc8e23 369 Hamap MF_00160 Phosphoserine aminotransferase [serC]. 14 368 46.335 T 22-04-2016 IPR022278 Phosphoserine aminotransferase GO:0004648|GO:0006564 KEGG: 00260+2.6.1.52|KEGG: 00680+2.6.1.52|KEGG: 00750+2.6.1.52|UniPathway: UPA00135|UniPathway: UPA00244 SRM_RS12470 a4462c639c4ea7bed32308c663cc8e23 369 PIRSF PIRSF000525 10 369 2.2E-135 T 22-04-2016 IPR022278 Phosphoserine aminotransferase GO:0004648|GO:0006564 KEGG: 00260+2.6.1.52|KEGG: 00680+2.6.1.52|KEGG: 00750+2.6.1.52|UniPathway: UPA00135|UniPathway: UPA00244 SRM_RS12470 a4462c639c4ea7bed32308c663cc8e23 369 TIGRFAM TIGR01364 serC_1: phosphoserine transaminase 17 368 1.7E-138 T 22-04-2016 IPR022278 Phosphoserine aminotransferase GO:0004648|GO:0006564 KEGG: 00260+2.6.1.52|KEGG: 00680+2.6.1.52|KEGG: 00750+2.6.1.52|UniPathway: UPA00135|UniPathway: UPA00244 SRM_RS12470 a4462c639c4ea7bed32308c663cc8e23 369 Gene3D G3DSA:3.40.640.10 30 266 1.1E-85 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 SRM_RS12470 a4462c639c4ea7bed32308c663cc8e23 369 SUPERFAMILY SSF53383 15 366 7.59E-102 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase SRM_RS12470 a4462c639c4ea7bed32308c663cc8e23 369 Pfam PF00266 Aminotransferase class-V 17 357 2.9E-45 T 22-04-2016 IPR000192 Aminotransferase class V domain SRM_RS12470 a4462c639c4ea7bed32308c663cc8e23 369 Gene3D G3DSA:3.90.1150.10 267 368 4.2E-39 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 SRM_RS12470 a4462c639c4ea7bed32308c663cc8e23 369 ProSitePatterns PS00595 Aminotransferases class-V pyridoxal-phosphate attachment site. 198 217 - T 22-04-2016 IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site SRM_RS15975 e0eed0746bd5b930f9250053c4101914 191 Pfam PF13102 Phage integrase SAM-like domain 7 170 8.0E-24 T 22-04-2016 IPR025269 Phage integrase SAM-like domain SRM_RS03945 11198964aa46b514195aadc89eb69ea1 599 Gene3D G3DSA:3.40.50.300 355 586 1.1E-70 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SRM_RS03945 11198964aa46b514195aadc89eb69ea1 599 Pfam PF00664 ABC transporter transmembrane region 44 283 1.1E-13 T 22-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 SRM_RS03945 11198964aa46b514195aadc89eb69ea1 599 SMART SM00382 381 578 1.7E-11 T 22-04-2016 IPR003593 AAA+ ATPase domain SRM_RS03945 11198964aa46b514195aadc89eb69ea1 599 PANTHER PTHR24221:SF138 78 599 5.6E-122 T 22-04-2016 SRM_RS03945 11198964aa46b514195aadc89eb69ea1 599 PANTHER PTHR24221:SF138 2 60 5.6E-122 T 22-04-2016 SRM_RS03945 11198964aa46b514195aadc89eb69ea1 599 Pfam PF00005 ABC transporter 372 526 7.7E-31 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 SRM_RS03945 11198964aa46b514195aadc89eb69ea1 599 Gene3D G3DSA:1.20.1560.10 20 333 1.6E-25 T 22-04-2016 SRM_RS03945 11198964aa46b514195aadc89eb69ea1 599 SUPERFAMILY SSF52540 348 597 2.5E-78 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SRM_RS03945 11198964aa46b514195aadc89eb69ea1 599 PANTHER PTHR24221 78 599 5.6E-122 T 22-04-2016 SRM_RS03945 11198964aa46b514195aadc89eb69ea1 599 PANTHER PTHR24221 2 60 5.6E-122 T 22-04-2016 SRM_RS03945 11198964aa46b514195aadc89eb69ea1 599 SUPERFAMILY SSF90123 14 329 2.49E-28 T 22-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 SRM_RS03945 11198964aa46b514195aadc89eb69ea1 599 ProSitePatterns PS00211 ABC transporters family signature. 498 512 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 SRM_RS02950 020753a0e6e4442c55fcb145a523aa2c 392 SUPERFAMILY SSF51306 35 157 3.14E-48 T 22-04-2016 IPR015927 Peptidase S24/S26A/S26B/S26C SRM_RS02950 020753a0e6e4442c55fcb145a523aa2c 392 SUPERFAMILY SSF51306 224 346 3.14E-48 T 22-04-2016 IPR015927 Peptidase S24/S26A/S26B/S26C SRM_RS02950 020753a0e6e4442c55fcb145a523aa2c 392 PANTHER PTHR12383:SF27 96 171 1.6E-52 T 22-04-2016 SRM_RS02950 020753a0e6e4442c55fcb145a523aa2c 392 PANTHER PTHR12383:SF27 1 69 1.6E-52 T 22-04-2016 SRM_RS02950 020753a0e6e4442c55fcb145a523aa2c 392 PANTHER PTHR12383:SF27 274 370 1.6E-52 T 22-04-2016 SRM_RS02950 020753a0e6e4442c55fcb145a523aa2c 392 TIGRFAM TIGR02227 sigpep_I_bact: signal peptidase I 23 149 2.6E-21 T 22-04-2016 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 SRM_RS02950 020753a0e6e4442c55fcb145a523aa2c 392 ProSitePatterns PS00760 Signal peptidases I lysine active site. 124 136 - T 22-04-2016 IPR019757 Peptidase S26A, signal peptidase I, lysine active site GO:0008236|GO:0016021 SRM_RS02950 020753a0e6e4442c55fcb145a523aa2c 392 PRINTS PR00727 Bacterial leader peptidase 1 (S26A) family signature 122 134 4.7E-15 T 22-04-2016 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 SRM_RS02950 020753a0e6e4442c55fcb145a523aa2c 392 PRINTS PR00727 Bacterial leader peptidase 1 (S26A) family signature 292 311 4.7E-15 T 22-04-2016 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 SRM_RS02950 020753a0e6e4442c55fcb145a523aa2c 392 PRINTS PR00727 Bacterial leader peptidase 1 (S26A) family signature 37 53 4.7E-15 T 22-04-2016 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 SRM_RS02950 020753a0e6e4442c55fcb145a523aa2c 392 Gene3D G3DSA:2.10.109.10 33 132 5.5E-47 T 22-04-2016 IPR028360 Peptidase S24/S26, beta-ribbon domain SRM_RS02950 020753a0e6e4442c55fcb145a523aa2c 392 Gene3D G3DSA:2.10.109.10 292 338 5.5E-47 T 22-04-2016 IPR028360 Peptidase S24/S26, beta-ribbon domain SRM_RS02950 020753a0e6e4442c55fcb145a523aa2c 392 PANTHER PTHR12383 96 171 1.6E-52 T 22-04-2016 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 SRM_RS02950 020753a0e6e4442c55fcb145a523aa2c 392 PANTHER PTHR12383 1 69 1.6E-52 T 22-04-2016 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 SRM_RS02950 020753a0e6e4442c55fcb145a523aa2c 392 PANTHER PTHR12383 274 370 1.6E-52 T 22-04-2016 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 SRM_RS02950 020753a0e6e4442c55fcb145a523aa2c 392 Pfam PF00717 Peptidase S24-like 43 136 6.8E-13 T 22-04-2016 IPR019759 Peptidase S24/S26A/S26B SRM_RS14300 51f0e5782730e6b2b944cba65cd386a1 252 SUPERFAMILY SSF52467 6 246 4.91E-84 T 22-04-2016 IPR029035 DHS-like NAD/FAD-binding domain SRM_RS14300 51f0e5782730e6b2b944cba65cd386a1 252 PANTHER PTHR11085 6 245 4.2E-85 T 22-04-2016 IPR003000 Sirtuin family GO:0070403 SRM_RS14300 51f0e5782730e6b2b944cba65cd386a1 252 Gene3D G3DSA:3.30.1600.10 121 168 3.0E-29 T 22-04-2016 IPR026591 Sirtuin family, catalytic core small domain SRM_RS14300 51f0e5782730e6b2b944cba65cd386a1 252 Gene3D G3DSA:3.30.1600.10 32 71 3.0E-29 T 22-04-2016 IPR026591 Sirtuin family, catalytic core small domain SRM_RS14300 51f0e5782730e6b2b944cba65cd386a1 252 Gene3D G3DSA:3.40.50.1220 7 31 1.8E-41 T 22-04-2016 IPR029035 DHS-like NAD/FAD-binding domain SRM_RS14300 51f0e5782730e6b2b944cba65cd386a1 252 Gene3D G3DSA:3.40.50.1220 79 120 1.8E-41 T 22-04-2016 IPR029035 DHS-like NAD/FAD-binding domain SRM_RS14300 51f0e5782730e6b2b944cba65cd386a1 252 Gene3D G3DSA:3.40.50.1220 177 243 1.8E-41 T 22-04-2016 IPR029035 DHS-like NAD/FAD-binding domain SRM_RS14300 51f0e5782730e6b2b944cba65cd386a1 252 Hamap MF_01121 NAD-dependent protein deacylase [cobB]. 16 248 53.761 T 22-04-2016 IPR027546 Sirtuin, class III GO:0036054|GO:0036055|GO:0070403 SRM_RS14300 51f0e5782730e6b2b944cba65cd386a1 252 Pfam PF02146 Sir2 family 23 198 9.8E-55 T 22-04-2016 IPR003000 Sirtuin family GO:0070403 SRM_RS03815 ed564406e490a1075e03629d8d576478 318 Gene3D G3DSA:3.20.20.190 34 314 1.9E-66 T 22-04-2016 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain GO:0006629|GO:0008081 SRM_RS03815 ed564406e490a1075e03629d8d576478 318 SUPERFAMILY SSF51695 37 310 3.66E-58 T 22-04-2016 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain GO:0006629|GO:0008081 SRM_RS03815 ed564406e490a1075e03629d8d576478 318 Pfam PF03009 Glycerophosphoryl diester phosphodiesterase family 41 306 1.8E-31 T 22-04-2016 IPR030395 Glycerophosphodiester phosphodiesterase domain GO:0006629|GO:0008081 SRM_RS03815 ed564406e490a1075e03629d8d576478 318 PANTHER PTHR23344 9 312 1.0E-43 T 22-04-2016 IPR004129 Glycerophosphoryl diester phosphodiesterase GO:0008889 SRM_RS10565 e9c7c587d699342aebe8ff96e7613f36 272 TIGRFAM TIGR00087 surE: 5'/3'-nucleotidase SurE 11 249 7.5E-67 T 22-04-2016 IPR002828 Survival protein SurE-like phosphatase/nucleotidase GO:0016787 KEGG: 00230+3.1.3.5|KEGG: 00240+3.1.3.5|KEGG: 00760+3.1.3.5|MetaCyc: PWY-5381|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-7185 SRM_RS10565 e9c7c587d699342aebe8ff96e7613f36 272 PANTHER PTHR30457 6 264 3.3E-85 T 22-04-2016 SRM_RS10565 e9c7c587d699342aebe8ff96e7613f36 272 Hamap MF_00060 5'/3'-nucleotidase SurE [surE]. 10 266 34.905 T 22-04-2016 IPR030048 Survival protein SurE GO:0008252 KEGG: 00230+3.1.3.5|KEGG: 00240+3.1.3.5|KEGG: 00760+3.1.3.5|MetaCyc: PWY-5381|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-7185 SRM_RS10565 e9c7c587d699342aebe8ff96e7613f36 272 Pfam PF01975 Survival protein SurE 12 199 2.4E-55 T 22-04-2016 IPR002828 Survival protein SurE-like phosphatase/nucleotidase GO:0016787 KEGG: 00230+3.1.3.5|KEGG: 00240+3.1.3.5|KEGG: 00760+3.1.3.5|MetaCyc: PWY-5381|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-7185 SRM_RS10565 e9c7c587d699342aebe8ff96e7613f36 272 Gene3D G3DSA:3.40.1210.10 10 260 2.2E-86 T 22-04-2016 IPR002828 Survival protein SurE-like phosphatase/nucleotidase GO:0016787 KEGG: 00230+3.1.3.5|KEGG: 00240+3.1.3.5|KEGG: 00760+3.1.3.5|MetaCyc: PWY-5381|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-7185 SRM_RS10565 e9c7c587d699342aebe8ff96e7613f36 272 SUPERFAMILY SSF64167 11 262 2.75E-78 T 22-04-2016 IPR002828 Survival protein SurE-like phosphatase/nucleotidase GO:0016787 KEGG: 00230+3.1.3.5|KEGG: 00240+3.1.3.5|KEGG: 00760+3.1.3.5|MetaCyc: PWY-5381|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-7185 SRM_RS02145 a52dab4e2322940193e8171df3e7b06e 172 Pfam PF06491 Disulphide isomerase 3 140 4.2E-52 T 22-04-2016 IPR009474 Putative bacilliredoxin, YphP/YqiW family SRM_RS02145 a52dab4e2322940193e8171df3e7b06e 172 TIGRFAM TIGR04191 YphP_YqiW: putative bacilliredoxin, YphP/YqiW family 3 140 2.7E-54 T 22-04-2016 IPR009474 Putative bacilliredoxin, YphP/YqiW family SRM_RS02145 a52dab4e2322940193e8171df3e7b06e 172 PANTHER PTHR40052 1 143 1.7E-40 T 22-04-2016 SRM_RS14730 da7559ec2ce51ed8cce1a8df2db64944 372 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 52 341 4.5E-39 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SRM_RS14730 da7559ec2ce51ed8cce1a8df2db64944 372 ProSitePatterns PS00573 Pyridine nucleotide-disulphide oxidoreductases class-II active site. 181 201 - T 22-04-2016 IPR008255 Pyridine nucleotide-disulphide oxidoreductase, class-II, active site GO:0016491|GO:0055114 SRM_RS14730 da7559ec2ce51ed8cce1a8df2db64944 372 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 189 213 7.5E-74 T 22-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 SRM_RS14730 da7559ec2ce51ed8cce1a8df2db64944 372 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 315 333 7.5E-74 T 22-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 SRM_RS14730 da7559ec2ce51ed8cce1a8df2db64944 372 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 152 160 7.5E-74 T 22-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 SRM_RS14730 da7559ec2ce51ed8cce1a8df2db64944 372 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 85 100 7.5E-74 T 22-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 SRM_RS14730 da7559ec2ce51ed8cce1a8df2db64944 372 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 241 257 7.5E-74 T 22-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 SRM_RS14730 da7559ec2ce51ed8cce1a8df2db64944 372 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 52 74 7.5E-74 T 22-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 SRM_RS14730 da7559ec2ce51ed8cce1a8df2db64944 372 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 106 116 7.5E-74 T 22-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 SRM_RS14730 da7559ec2ce51ed8cce1a8df2db64944 372 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 280 301 7.5E-74 T 22-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 SRM_RS14730 da7559ec2ce51ed8cce1a8df2db64944 372 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 174 186 7.5E-74 T 22-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 SRM_RS14730 da7559ec2ce51ed8cce1a8df2db64944 372 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 151 169 6.4E-32 T 22-04-2016 SRM_RS14730 da7559ec2ce51ed8cce1a8df2db64944 372 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 278 294 6.4E-32 T 22-04-2016 SRM_RS14730 da7559ec2ce51ed8cce1a8df2db64944 372 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 53 72 6.4E-32 T 22-04-2016 SRM_RS14730 da7559ec2ce51ed8cce1a8df2db64944 372 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 305 327 6.4E-32 T 22-04-2016 SRM_RS14730 da7559ec2ce51ed8cce1a8df2db64944 372 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 193 211 6.4E-32 T 22-04-2016 SRM_RS14730 da7559ec2ce51ed8cce1a8df2db64944 372 PANTHER PTHR22912:SF48 37 354 7.0E-143 T 22-04-2016 SRM_RS14730 da7559ec2ce51ed8cce1a8df2db64944 372 Gene3D G3DSA:3.50.50.60 49 165 3.7E-41 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SRM_RS14730 da7559ec2ce51ed8cce1a8df2db64944 372 Gene3D G3DSA:3.50.50.60 287 355 3.7E-41 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SRM_RS14730 da7559ec2ce51ed8cce1a8df2db64944 372 PANTHER PTHR22912 37 354 7.0E-143 T 22-04-2016 SRM_RS14730 da7559ec2ce51ed8cce1a8df2db64944 372 Gene3D G3DSA:3.50.50.60 166 286 9.4E-30 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SRM_RS14730 da7559ec2ce51ed8cce1a8df2db64944 372 TIGRFAM TIGR01292 TRX_reduct: thioredoxin-disulfide reductase 52 352 1.1E-113 T 22-04-2016 IPR005982 Thioredoxin reductase GO:0004791|GO:0005737|GO:0019430|GO:0055114 KEGG: 00240+1.8.1.9|KEGG: 00450+1.8.1.9 SRM_RS14730 da7559ec2ce51ed8cce1a8df2db64944 372 SUPERFAMILY SSF51905 50 352 7.07E-47 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SRM_RS03675 6b61b2c8a76c3918fbb0ef2a23d56ee3 285 PANTHER PTHR10108 33 202 6.4E-23 T 22-04-2016 SRM_RS03675 6b61b2c8a76c3918fbb0ef2a23d56ee3 285 Gene3D G3DSA:3.40.50.150 36 208 1.6E-33 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SRM_RS03675 6b61b2c8a76c3918fbb0ef2a23d56ee3 285 SUPERFAMILY SSF53335 33 272 1.99E-34 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SRM_RS03675 6b61b2c8a76c3918fbb0ef2a23d56ee3 285 Pfam PF13847 Methyltransferase domain 55 167 4.4E-17 T 22-04-2016 IPR025714 Methyltransferase domain SRM_RS15710 ece6bb40b7a5ccac9d2787488eeeb73f 406 Pfam PF02687 FtsX-like permease family 286 399 2.6E-19 T 22-04-2016 IPR003838 ABC transporter permease protein domain GO:0016020 SRM_RS15710 ece6bb40b7a5ccac9d2787488eeeb73f 406 PANTHER PTHR30572 4 406 3.6E-73 T 22-04-2016 SRM_RS15710 ece6bb40b7a5ccac9d2787488eeeb73f 406 Pfam PF12704 MacB-like periplasmic core domain 21 245 7.5E-32 T 22-04-2016 IPR025857 MacB-like periplasmic core domain SRM_RS14240 a50df8c0178bc5672784ab16f66cbe7e 235 Pfam PF00265 Thymidine kinase 16 188 2.9E-53 T 22-04-2016 IPR001267 Thymidine kinase GO:0004797|GO:0005524 KEGG: 00240+2.7.1.21|KEGG: 00983+2.7.1.21|MetaCyc: PWY-7199 SRM_RS14240 a50df8c0178bc5672784ab16f66cbe7e 235 PANTHER PTHR11441 1 189 2.9E-80 T 22-04-2016 IPR001267 Thymidine kinase GO:0004797|GO:0005524 KEGG: 00240+2.7.1.21|KEGG: 00983+2.7.1.21|MetaCyc: PWY-7199 SRM_RS14240 a50df8c0178bc5672784ab16f66cbe7e 235 SUPERFAMILY SSF57716 149 192 2.42E-12 T 22-04-2016 SRM_RS14240 a50df8c0178bc5672784ab16f66cbe7e 235 ProSitePatterns PS00603 Thymidine kinase cellular-type signature. 175 188 - T 22-04-2016 IPR020633 Thymidine kinase, conserved site GO:0004797|GO:0005524 KEGG: 00240+2.7.1.21|KEGG: 00983+2.7.1.21|MetaCyc: PWY-7199 SRM_RS14240 a50df8c0178bc5672784ab16f66cbe7e 235 Hamap MF_00124 Thymidine kinase [tdk]. 15 191 34.054 T 22-04-2016 IPR001267 Thymidine kinase GO:0004797|GO:0005524 KEGG: 00240+2.7.1.21|KEGG: 00983+2.7.1.21|MetaCyc: PWY-7199 SRM_RS14240 a50df8c0178bc5672784ab16f66cbe7e 235 SUPERFAMILY SSF52540 16 149 7.26E-41 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SRM_RS14240 a50df8c0178bc5672784ab16f66cbe7e 235 Gene3D G3DSA:3.30.60.20 149 188 1.6E-16 T 22-04-2016 SRM_RS10615 06763e8ab3bd224fa801a9bb6095596c 184 SUPERFAMILY SSF54637 8 154 1.28E-42 T 22-04-2016 IPR029069 HotDog domain SRM_RS10615 06763e8ab3bd224fa801a9bb6095596c 184 PANTHER PTHR11049 7 154 7.5E-58 T 22-04-2016 SRM_RS10615 06763e8ab3bd224fa801a9bb6095596c 184 Pfam PF03061 Thioesterase superfamily 30 103 2.8E-16 T 22-04-2016 IPR006683 Thioesterase domain SRM_RS10615 06763e8ab3bd224fa801a9bb6095596c 184 Gene3D G3DSA:3.10.129.10 8 157 1.1E-52 T 22-04-2016 IPR029069 HotDog domain SRM_RS03315 0b4cb257dbca78559c19e0b19994e4eb 317 PANTHER PTHR21499:SF3 18 310 7.6E-62 T 22-04-2016 SRM_RS03315 0b4cb257dbca78559c19e0b19994e4eb 317 Gene3D G3DSA:3.40.1160.10 113 311 9.3E-50 T 22-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 SRM_RS03315 0b4cb257dbca78559c19e0b19994e4eb 317 Gene3D G3DSA:3.40.1160.10 16 64 9.3E-50 T 22-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 SRM_RS03315 0b4cb257dbca78559c19e0b19994e4eb 317 SUPERFAMILY SSF53633 17 310 1.28E-63 T 22-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 SRM_RS03315 0b4cb257dbca78559c19e0b19994e4eb 317 PANTHER PTHR21499 18 310 7.6E-62 T 22-04-2016 SRM_RS03315 0b4cb257dbca78559c19e0b19994e4eb 317 TIGRFAM TIGR00657 asp_kinases: aspartate kinase 18 311 4.7E-68 T 22-04-2016 IPR001341 Aspartate kinase domain GO:0004072|GO:0008652 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|UniPathway: UPA00034|UniPathway: UPA00050|UniPathway: UPA00051 SRM_RS03315 0b4cb257dbca78559c19e0b19994e4eb 317 ProSitePatterns PS00324 Aspartokinase signature. 18 26 - T 22-04-2016 IPR018042 Aspartate kinase, conserved site GO:0004072|GO:0008652 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|UniPathway: UPA00034|UniPathway: UPA00050|UniPathway: UPA00051 SRM_RS03315 0b4cb257dbca78559c19e0b19994e4eb 317 Pfam PF00696 Amino acid kinase family 17 296 4.8E-47 T 22-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 SRM_RS04835 7241075b3466b97236a1d0d4dc69b941 506 Gene3D G3DSA:1.20.200.10 197 499 3.3E-124 T 22-04-2016 SRM_RS04835 7241075b3466b97236a1d0d4dc69b941 506 TIGRFAM TIGR01225 hutH: histidine ammonia-lyase 24 499 6.7E-184 T 22-04-2016 IPR005921 Histidine ammonia-lyase GO:0004397|GO:0005737|GO:0006548 KEGG: 00340+4.3.1.3|MetaCyc: PWY-5028|MetaCyc: PWY-5030|UniPathway: UPA00379 SRM_RS04835 7241075b3466b97236a1d0d4dc69b941 506 PANTHER PTHR10362 33 494 5.5E-212 T 22-04-2016 SRM_RS04835 7241075b3466b97236a1d0d4dc69b941 506 SUPERFAMILY SSF48557 29 494 1.73E-175 T 22-04-2016 IPR008948 L-Aspartase-like GO:0003824 SRM_RS04835 7241075b3466b97236a1d0d4dc69b941 506 Gene3D G3DSA:1.10.275.10 32 196 1.2E-57 T 22-04-2016 IPR024083 Fumarase/histidase, N-terminal SRM_RS04835 7241075b3466b97236a1d0d4dc69b941 506 Pfam PF00221 Aromatic amino acid lyase 31 467 2.0E-180 T 22-04-2016 IPR001106 Aromatic amino acid lyase SRM_RS04835 7241075b3466b97236a1d0d4dc69b941 506 ProSitePatterns PS00488 Phenylalanine and histidine ammonia-lyases signature. 136 152 - T 22-04-2016 IPR022313 Phenylalanine/histidine ammonia-lyases, active site GO:0016841 SRM_RS04835 7241075b3466b97236a1d0d4dc69b941 506 PANTHER PTHR10362:SF7 33 494 5.5E-212 T 22-04-2016 SRM_RS13150 cede5108d8dd807aecf1cb8a1df1731d 138 ProSitePatterns PS01328 4-hydroxybenzoyl-CoA thioesterase family active site. 10 27 - T 22-04-2016 IPR008272 4-hydroxybenzoyl-CoA thioesterase, active site GO:0016787 SRM_RS13150 cede5108d8dd807aecf1cb8a1df1731d 138 PANTHER PTHR31793 3 138 2.0E-41 T 22-04-2016 SRM_RS13150 cede5108d8dd807aecf1cb8a1df1731d 138 Pfam PF03061 Thioesterase superfamily 19 101 7.9E-14 T 22-04-2016 IPR006683 Thioesterase domain SRM_RS13150 cede5108d8dd807aecf1cb8a1df1731d 138 SUPERFAMILY SSF54637 1 134 3.84E-39 T 22-04-2016 IPR029069 HotDog domain SRM_RS13150 cede5108d8dd807aecf1cb8a1df1731d 138 PANTHER PTHR31793:SF9 3 138 2.0E-41 T 22-04-2016 SRM_RS13150 cede5108d8dd807aecf1cb8a1df1731d 138 Gene3D G3DSA:3.10.129.10 3 132 3.6E-43 T 22-04-2016 IPR029069 HotDog domain SRM_RS13150 cede5108d8dd807aecf1cb8a1df1731d 138 TIGRFAM TIGR00051 TIGR00051: acyl-CoA thioester hydrolase, YbgC/YbaW family 10 114 4.7E-26 T 22-04-2016 IPR006684 Acyl-CoA thioester hydrolase YbgC/YbaW family GO:0016787 SRM_RS13150 cede5108d8dd807aecf1cb8a1df1731d 138 PIRSF PIRSF003230 1 138 1.9E-36 T 22-04-2016 IPR006684 Acyl-CoA thioester hydrolase YbgC/YbaW family GO:0016787 SRM_RS02365 818a39172103a25bcae7221f2656c49f 645 Gene3D G3DSA:1.10.530.10 258 408 9.9E-45 T 22-04-2016 SRM_RS02365 818a39172103a25bcae7221f2656c49f 645 Pfam PF01464 Transglycosylase SLT domain 271 373 3.2E-25 T 22-04-2016 IPR008258 Transglycosylase SLT domain 1 SRM_RS02365 818a39172103a25bcae7221f2656c49f 645 SUPERFAMILY SSF53955 262 408 2.91E-38 T 22-04-2016 IPR023346 Lysozyme-like domain SRM_RS02365 818a39172103a25bcae7221f2656c49f 645 PANTHER PTHR21666:SF219 214 539 3.3E-79 T 22-04-2016 SRM_RS02365 818a39172103a25bcae7221f2656c49f 645 Gene3D G3DSA:3.10.350.10 492 538 1.6E-16 T 22-04-2016 IPR018392 LysM domain SRM_RS02365 818a39172103a25bcae7221f2656c49f 645 Gene3D G3DSA:3.10.350.10 599 643 3.6E-17 T 22-04-2016 IPR018392 LysM domain SRM_RS02365 818a39172103a25bcae7221f2656c49f 645 PANTHER PTHR21666:SF219 577 643 3.3E-79 T 22-04-2016 SRM_RS02365 818a39172103a25bcae7221f2656c49f 645 ProSitePatterns PS00922 Prokaryotic transglycosylases signature. 282 310 - T 22-04-2016 IPR000189 Prokaryotic transglycosylase, active site GO:0000270|GO:0008933|GO:0016020 SRM_RS02365 818a39172103a25bcae7221f2656c49f 645 SUPERFAMILY SSF54106 600 643 1.31E-10 T 22-04-2016 IPR018392 LysM domain SRM_RS02365 818a39172103a25bcae7221f2656c49f 645 PANTHER PTHR21666 577 643 3.3E-79 T 22-04-2016 SRM_RS02365 818a39172103a25bcae7221f2656c49f 645 PANTHER PTHR21666 214 539 3.3E-79 T 22-04-2016 SRM_RS02365 818a39172103a25bcae7221f2656c49f 645 SUPERFAMILY SSF54106 493 538 2.75E-10 T 22-04-2016 IPR018392 LysM domain SRM_RS02365 818a39172103a25bcae7221f2656c49f 645 SMART SM00257 601 644 8.4E-14 T 22-04-2016 IPR018392 LysM domain SRM_RS02365 818a39172103a25bcae7221f2656c49f 645 SMART SM00257 494 537 2.4E-13 T 22-04-2016 IPR018392 LysM domain SRM_RS02365 818a39172103a25bcae7221f2656c49f 645 Pfam PF01476 LysM domain 602 643 1.2E-12 T 22-04-2016 IPR018392 LysM domain SRM_RS02365 818a39172103a25bcae7221f2656c49f 645 Pfam PF01476 LysM domain 495 537 5.6E-10 T 22-04-2016 IPR018392 LysM domain SRM_RS13040 3e611ecc4677ab6beae44d23c7ab44c3 775 SUPERFAMILY SSF47384 220 301 1.02E-17 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SRM_RS13040 3e611ecc4677ab6beae44d23c7ab44c3 775 Gene3D G3DSA:1.10.10.60 719 765 3.2E-17 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 SRM_RS13040 3e611ecc4677ab6beae44d23c7ab44c3 775 Pfam PF12833 Helix-turn-helix domain 686 764 4.4E-24 T 22-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 SRM_RS13040 3e611ecc4677ab6beae44d23c7ab44c3 775 SMART SM00342 680 763 1.5E-30 T 22-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 SRM_RS13040 3e611ecc4677ab6beae44d23c7ab44c3 775 SMART SM00388 232 300 1.9E-15 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SRM_RS13040 3e611ecc4677ab6beae44d23c7ab44c3 775 Pfam PF00512 His Kinase A (phospho-acceptor) domain 232 300 2.7E-13 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SRM_RS13040 3e611ecc4677ab6beae44d23c7ab44c3 775 SMART SM00448 517 629 8.2E-26 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SRM_RS13040 3e611ecc4677ab6beae44d23c7ab44c3 775 Gene3D G3DSA:1.10.287.130 224 286 5.4E-15 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SRM_RS13040 3e611ecc4677ab6beae44d23c7ab44c3 775 SUPERFAMILY SSF52172 513 645 3.13E-32 T 22-04-2016 IPR011006 CheY-like superfamily SRM_RS13040 3e611ecc4677ab6beae44d23c7ab44c3 775 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 347 468 4.3E-18 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SRM_RS13040 3e611ecc4677ab6beae44d23c7ab44c3 775 Gene3D G3DSA:1.10.10.60 672 718 3.8E-6 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 SRM_RS13040 3e611ecc4677ab6beae44d23c7ab44c3 775 Pfam PF00072 Response regulator receiver domain 519 629 1.3E-21 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SRM_RS13040 3e611ecc4677ab6beae44d23c7ab44c3 775 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 717 759 - T 22-04-2016 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 SRM_RS13040 3e611ecc4677ab6beae44d23c7ab44c3 775 Gene3D G3DSA:3.30.565.10 287 471 2.8E-39 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SRM_RS13040 3e611ecc4677ab6beae44d23c7ab44c3 775 PRINTS PR00344 Bacterial sensor protein C-terminal signature 430 448 4.9E-10 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SRM_RS13040 3e611ecc4677ab6beae44d23c7ab44c3 775 PRINTS PR00344 Bacterial sensor protein C-terminal signature 454 467 4.9E-10 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SRM_RS13040 3e611ecc4677ab6beae44d23c7ab44c3 775 PRINTS PR00344 Bacterial sensor protein C-terminal signature 383 397 4.9E-10 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SRM_RS13040 3e611ecc4677ab6beae44d23c7ab44c3 775 Gene3D G3DSA:3.40.50.2300 515 640 1.1E-30 T 22-04-2016 SRM_RS13040 3e611ecc4677ab6beae44d23c7ab44c3 775 SMART SM00387 346 470 2.8E-19 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SRM_RS13040 3e611ecc4677ab6beae44d23c7ab44c3 775 SUPERFAMILY SSF55874 289 468 4.06E-37 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SRM_RS13040 3e611ecc4677ab6beae44d23c7ab44c3 775 PANTHER PTHR24423 92 109 5.2E-92 T 22-04-2016 SRM_RS13040 3e611ecc4677ab6beae44d23c7ab44c3 775 PANTHER PTHR24423 211 672 5.2E-92 T 22-04-2016 SRM_RS13040 3e611ecc4677ab6beae44d23c7ab44c3 775 SUPERFAMILY SSF46689 716 765 3.54E-12 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 SRM_RS15755 171857ea4086b1fea41a48dc00369071 1051 Pfam PF07715 TonB-dependent Receptor Plug Domain 125 250 3.9E-17 T 22-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 SRM_RS15755 171857ea4086b1fea41a48dc00369071 1051 Pfam PF13715 CarboxypepD_reg-like domain 30 116 1.6E-20 T 22-04-2016 SRM_RS15755 171857ea4086b1fea41a48dc00369071 1051 Gene3D G3DSA:2.170.130.10 118 251 6.9E-19 T 22-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 SRM_RS15755 171857ea4086b1fea41a48dc00369071 1051 Gene3D G3DSA:2.40.170.20 956 1051 7.3E-49 T 22-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 SRM_RS15755 171857ea4086b1fea41a48dc00369071 1051 Gene3D G3DSA:2.40.170.20 455 834 7.3E-49 T 22-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 SRM_RS15755 171857ea4086b1fea41a48dc00369071 1051 Gene3D G3DSA:2.40.170.20 252 295 7.3E-49 T 22-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 SRM_RS15755 171857ea4086b1fea41a48dc00369071 1051 Gene3D G3DSA:2.40.170.20 354 418 7.3E-49 T 22-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 SRM_RS15755 171857ea4086b1fea41a48dc00369071 1051 Gene3D G3DSA:2.40.170.20 874 899 7.3E-49 T 22-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 SRM_RS15755 171857ea4086b1fea41a48dc00369071 1051 TIGRFAM TIGR04057 SusC_RagA_signa: TonB-dependent outer membrane receptor, SusC/RagA subfamily, signature region 227 256 9.8E-15 T 22-04-2016 IPR023997 TonB-dependent outer membrane protein SusC/RagA, conserved site UniPathway: UPA00153 SRM_RS15755 171857ea4086b1fea41a48dc00369071 1051 PANTHER PTHR11532:SF51 217 494 3.2E-191 T 22-04-2016 SRM_RS15755 171857ea4086b1fea41a48dc00369071 1051 PANTHER PTHR11532:SF51 19 199 3.2E-191 T 22-04-2016 SRM_RS15755 171857ea4086b1fea41a48dc00369071 1051 PANTHER PTHR11532:SF51 541 1049 3.2E-191 T 22-04-2016 SRM_RS15755 171857ea4086b1fea41a48dc00369071 1051 Gene3D G3DSA:2.60.40.1120 29 117 5.1E-18 T 22-04-2016 IPR014766 Carboxypeptidase, regulatory domain SRM_RS15755 171857ea4086b1fea41a48dc00369071 1051 PANTHER PTHR11532 217 494 3.2E-191 T 22-04-2016 SRM_RS15755 171857ea4086b1fea41a48dc00369071 1051 PANTHER PTHR11532 19 199 3.2E-191 T 22-04-2016 SRM_RS15755 171857ea4086b1fea41a48dc00369071 1051 PANTHER PTHR11532 541 1049 3.2E-191 T 22-04-2016 SRM_RS15755 171857ea4086b1fea41a48dc00369071 1051 TIGRFAM TIGR04056 OMP_RagA_SusC: TonB-linked outer membrane protein, SusC/RagA family 29 1051 1.8E-197 T 22-04-2016 IPR023996 TonB-dependent outer membrane protein, SusC/RagA UniPathway: UPA00153 SRM_RS15755 171857ea4086b1fea41a48dc00369071 1051 SUPERFAMILY SSF56935 958 1051 1.21E-87 T 22-04-2016 SRM_RS15755 171857ea4086b1fea41a48dc00369071 1051 SUPERFAMILY SSF56935 345 433 1.21E-87 T 22-04-2016 SRM_RS15755 171857ea4086b1fea41a48dc00369071 1051 SUPERFAMILY SSF56935 112 273 1.21E-87 T 22-04-2016 SRM_RS15755 171857ea4086b1fea41a48dc00369071 1051 SUPERFAMILY SSF56935 867 909 1.21E-87 T 22-04-2016 SRM_RS15755 171857ea4086b1fea41a48dc00369071 1051 SUPERFAMILY SSF56935 472 803 1.21E-87 T 22-04-2016 SRM_RS15755 171857ea4086b1fea41a48dc00369071 1051 SUPERFAMILY SSF49464 29 125 1.14E-18 T 22-04-2016 IPR008969 Carboxypeptidase-like, regulatory domain SRM_RS07660 c81ff9c2df5497b0a667389c37027893 119 SUPERFAMILY SSF54427 14 116 2.84E-9 T 22-04-2016 IPR032710 NTF2-like domain SRM_RS07660 c81ff9c2df5497b0a667389c37027893 119 Gene3D G3DSA:3.10.450.50 21 115 1.3E-7 T 22-04-2016 IPR032710 NTF2-like domain SRM_RS07660 c81ff9c2df5497b0a667389c37027893 119 PANTHER PTHR34003 10 116 1.4E-13 T 22-04-2016 SRM_RS15270 7138410bfc3eeb82d87a8cdf64f560e8 610 SUPERFAMILY SSF52540 145 247 4.63E-22 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SRM_RS15270 7138410bfc3eeb82d87a8cdf64f560e8 610 SUPERFAMILY SSF52540 327 439 4.63E-22 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SRM_RS15270 7138410bfc3eeb82d87a8cdf64f560e8 610 Pfam PF00271 Helicase conserved C-terminal domain 340 438 7.4E-9 T 22-04-2016 IPR001650 Helicase, C-terminal SRM_RS15270 7138410bfc3eeb82d87a8cdf64f560e8 610 SMART SM00487 47 239 0.0042 T 22-04-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain SRM_RS15270 7138410bfc3eeb82d87a8cdf64f560e8 610 SUPERFAMILY SSF52540 50 201 6.91E-6 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SRM_RS15270 7138410bfc3eeb82d87a8cdf64f560e8 610 Gene3D G3DSA:3.40.50.300 50 219 1.9E-9 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SRM_RS15270 7138410bfc3eeb82d87a8cdf64f560e8 610 Pfam PF04851 Type III restriction enzyme, res subunit 49 215 4.6E-11 T 22-04-2016 IPR006935 Helicase/UvrB, N-terminal GO:0003677|GO:0005524|GO:0016787 SRM_RS15270 7138410bfc3eeb82d87a8cdf64f560e8 610 SMART SM00490 353 439 0.0099 T 22-04-2016 IPR001650 Helicase, C-terminal SRM_RS15270 7138410bfc3eeb82d87a8cdf64f560e8 610 Gene3D G3DSA:3.40.50.300 341 437 9.6E-12 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SRM_RS01920 ef5093530938909e266fed2a995bcaef 380 SUPERFAMILY SSF53756 29 360 1.77E-50 T 22-04-2016 SRM_RS01920 ef5093530938909e266fed2a995bcaef 380 Gene3D G3DSA:3.40.50.2000 191 339 3.0E-20 T 22-04-2016 SRM_RS01920 ef5093530938909e266fed2a995bcaef 380 PANTHER PTHR12526 53 365 2.7E-37 T 22-04-2016 SRM_RS01920 ef5093530938909e266fed2a995bcaef 380 Pfam PF00534 Glycosyl transferases group 1 189 338 1.3E-24 T 22-04-2016 IPR001296 Glycosyl transferase, family 1 SRM_RS01920 ef5093530938909e266fed2a995bcaef 380 Pfam PF13439 Glycosyltransferase Family 4 33 166 3.2E-7 T 22-04-2016 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain SRM_RS14810 727d40e57f63967fda0fa714ebbf724e 244 ProSitePatterns PS00382 Endopeptidase Clp histidine active site. 141 154 - T 22-04-2016 IPR033135 ClpP, histidine active site SRM_RS14810 727d40e57f63967fda0fa714ebbf724e 244 Pfam PF00574 Clp protease 42 220 8.3E-80 T 22-04-2016 IPR023562 Clp protease proteolytic subunit /Translocation-enhancing protein TepA SRM_RS14810 727d40e57f63967fda0fa714ebbf724e 244 PRINTS PR00127 Clp protease catalytic subunit P signature 48 63 1.9E-48 T 22-04-2016 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 SRM_RS14810 727d40e57f63967fda0fa714ebbf724e 244 PRINTS PR00127 Clp protease catalytic subunit P signature 197 216 1.9E-48 T 22-04-2016 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 SRM_RS14810 727d40e57f63967fda0fa714ebbf724e 244 PRINTS PR00127 Clp protease catalytic subunit P signature 119 136 1.9E-48 T 22-04-2016 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 SRM_RS14810 727d40e57f63967fda0fa714ebbf724e 244 PRINTS PR00127 Clp protease catalytic subunit P signature 88 108 1.9E-48 T 22-04-2016 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 SRM_RS14810 727d40e57f63967fda0fa714ebbf724e 244 PRINTS PR00127 Clp protease catalytic subunit P signature 140 159 1.9E-48 T 22-04-2016 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 SRM_RS14810 727d40e57f63967fda0fa714ebbf724e 244 ProSitePatterns PS00381 Endopeptidase Clp serine active site. 119 130 - T 22-04-2016 IPR018215 ClpP, Ser active site SRM_RS14810 727d40e57f63967fda0fa714ebbf724e 244 Gene3D G3DSA:3.90.226.10 32 220 1.9E-81 T 22-04-2016 IPR029045 ClpP/crotonase-like domain SRM_RS14810 727d40e57f63967fda0fa714ebbf724e 244 SUPERFAMILY SSF52096 40 223 3.28E-70 T 22-04-2016 IPR029045 ClpP/crotonase-like domain SRM_RS14810 727d40e57f63967fda0fa714ebbf724e 244 Hamap MF_00444 ATP-dependent Clp protease proteolytic subunit [clpP]. 32 222 42.073 T 22-04-2016 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 SRM_RS14810 727d40e57f63967fda0fa714ebbf724e 244 PANTHER PTHR10381 29 221 1.1E-120 T 22-04-2016 IPR023562 Clp protease proteolytic subunit /Translocation-enhancing protein TepA SRM_RS06460 0ac529f2582bedc0b9a80a9bf9ff287a 706 SUPERFAMILY SSF50447 269 409 1.25E-34 T 22-04-2016 IPR009000 Translation protein, beta-barrel domain SRM_RS06460 0ac529f2582bedc0b9a80a9bf9ff287a 706 Gene3D G3DSA:3.30.70.240 608 694 2.8E-33 T 22-04-2016 IPR000640 Translation elongation factor EFG, V domain SRM_RS06460 0ac529f2582bedc0b9a80a9bf9ff287a 706 PRINTS PR00315 GTP-binding elongation factor signature 98 109 1.8E-15 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 SRM_RS06460 0ac529f2582bedc0b9a80a9bf9ff287a 706 PRINTS PR00315 GTP-binding elongation factor signature 62 70 1.8E-15 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 SRM_RS06460 0ac529f2582bedc0b9a80a9bf9ff287a 706 PRINTS PR00315 GTP-binding elongation factor signature 82 92 1.8E-15 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 SRM_RS06460 0ac529f2582bedc0b9a80a9bf9ff287a 706 PRINTS PR00315 GTP-binding elongation factor signature 16 29 1.8E-15 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 SRM_RS06460 0ac529f2582bedc0b9a80a9bf9ff287a 706 PRINTS PR00315 GTP-binding elongation factor signature 134 143 1.8E-15 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 SRM_RS06460 0ac529f2582bedc0b9a80a9bf9ff287a 706 PANTHER PTHR23115:SF66 308 700 0.0 T 22-04-2016 SRM_RS06460 0ac529f2582bedc0b9a80a9bf9ff287a 706 PANTHER PTHR23115:SF66 1 181 0.0 T 22-04-2016 SRM_RS06460 0ac529f2582bedc0b9a80a9bf9ff287a 706 PANTHER PTHR23115:SF66 259 287 0.0 T 22-04-2016 SRM_RS06460 0ac529f2582bedc0b9a80a9bf9ff287a 706 Gene3D G3DSA:3.30.230.10 489 607 1.8E-40 T 22-04-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup SRM_RS06460 0ac529f2582bedc0b9a80a9bf9ff287a 706 Pfam PF03764 Elongation factor G, domain IV 484 607 1.9E-39 T 22-04-2016 IPR005517 Translation elongation factor EFG/EF2, domain IV GO:0005525 SRM_RS06460 0ac529f2582bedc0b9a80a9bf9ff287a 706 TIGRFAM TIGR00484 EF-G: translation elongation factor G 8 700 0.0 T 22-04-2016 IPR004540 Translation elongation factor EFG/EF2 GO:0003746|GO:0005525|GO:0005622|GO:0006414 SRM_RS06460 0ac529f2582bedc0b9a80a9bf9ff287a 706 SUPERFAMILY SSF54211 484 608 2.78E-37 T 22-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold SRM_RS06460 0ac529f2582bedc0b9a80a9bf9ff287a 706 SUPERFAMILY SSF54980 409 486 4.32E-26 T 22-04-2016 IPR009022 Elongation factor G, III-V domain SRM_RS06460 0ac529f2582bedc0b9a80a9bf9ff287a 706 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 13 184 1.3E-32 T 22-04-2016 IPR005225 Small GTP-binding protein domain GO:0005525 SRM_RS06460 0ac529f2582bedc0b9a80a9bf9ff287a 706 SUPERFAMILY SSF54980 612 699 1.92E-29 T 22-04-2016 IPR009022 Elongation factor G, III-V domain SRM_RS06460 0ac529f2582bedc0b9a80a9bf9ff287a 706 Pfam PF14492 Elongation Factor G, domain II 409 483 3.1E-34 T 22-04-2016 IPR009022 Elongation factor G, III-V domain SRM_RS06460 0ac529f2582bedc0b9a80a9bf9ff287a 706 Hamap MF_00054_B Elongation factor G [fusA]. 10 700 109.096 T 22-04-2016 IPR004540 Translation elongation factor EFG/EF2 GO:0003746|GO:0005525|GO:0005622|GO:0006414 SRM_RS06460 0ac529f2582bedc0b9a80a9bf9ff287a 706 SUPERFAMILY SSF52540 10 286 5.23E-107 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SRM_RS06460 0ac529f2582bedc0b9a80a9bf9ff287a 706 Gene3D G3DSA:3.40.50.300 11 291 3.0E-103 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SRM_RS06460 0ac529f2582bedc0b9a80a9bf9ff287a 706 PANTHER PTHR23115 308 700 0.0 T 22-04-2016 SRM_RS06460 0ac529f2582bedc0b9a80a9bf9ff287a 706 PANTHER PTHR23115 1 181 0.0 T 22-04-2016 SRM_RS06460 0ac529f2582bedc0b9a80a9bf9ff287a 706 PANTHER PTHR23115 259 287 0.0 T 22-04-2016 SRM_RS06460 0ac529f2582bedc0b9a80a9bf9ff287a 706 Pfam PF00009 Elongation factor Tu GTP binding domain 13 286 9.5E-68 T 22-04-2016 SRM_RS06460 0ac529f2582bedc0b9a80a9bf9ff287a 706 Gene3D G3DSA:2.40.30.10 311 410 4.2E-37 T 22-04-2016 SRM_RS06460 0ac529f2582bedc0b9a80a9bf9ff287a 706 Pfam PF03144 Elongation factor Tu domain 2 329 396 2.7E-14 T 22-04-2016 IPR004161 Translation elongation factor EFTu/EF1A, domain 2 GO:0005525 SRM_RS06460 0ac529f2582bedc0b9a80a9bf9ff287a 706 Pfam PF00679 Elongation factor G C-terminus 609 695 3.7E-31 T 22-04-2016 IPR000640 Translation elongation factor EFG, V domain SRM_RS06460 0ac529f2582bedc0b9a80a9bf9ff287a 706 SMART SM00889 485 607 2.6E-60 T 22-04-2016 IPR005517 Translation elongation factor EFG/EF2, domain IV GO:0005525 SRM_RS06460 0ac529f2582bedc0b9a80a9bf9ff287a 706 Gene3D G3DSA:3.30.70.870 411 485 9.9E-38 T 22-04-2016 SRM_RS06460 0ac529f2582bedc0b9a80a9bf9ff287a 706 SMART SM00838 609 696 1.8E-54 T 22-04-2016 IPR000640 Translation elongation factor EFG, V domain SRM_RS06460 0ac529f2582bedc0b9a80a9bf9ff287a 706 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 55 70 - T 22-04-2016 IPR031157 Tr-type G domain, conserved site SRM_RS06715 5434536c15497d1af84884432a69ed6c 494 Gene3D G3DSA:3.40.50.620 35 198 1.2E-44 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold SRM_RS06715 5434536c15497d1af84884432a69ed6c 494 SUPERFAMILY SSF48173 228 485 5.36E-85 T 22-04-2016 IPR005101 Cryptochrome/DNA photolyase, FAD-binding domain SRM_RS06715 5434536c15497d1af84884432a69ed6c 494 Gene3D G3DSA:1.25.40.80 231 302 8.4E-21 T 22-04-2016 SRM_RS06715 5434536c15497d1af84884432a69ed6c 494 PANTHER PTHR11455 34 494 6.5E-144 T 22-04-2016 SRM_RS06715 5434536c15497d1af84884432a69ed6c 494 Gene3D G3DSA:1.10.579.10 303 485 7.0E-66 T 22-04-2016 SRM_RS06715 5434536c15497d1af84884432a69ed6c 494 Pfam PF00875 DNA photolyase 36 196 2.1E-47 T 22-04-2016 IPR006050 DNA photolyase, N-terminal SRM_RS06715 5434536c15497d1af84884432a69ed6c 494 PRINTS PR00147 DNA photolyase signature 175 191 3.4E-22 T 22-04-2016 IPR002081 Cryptochrome/DNA photolyase class 1 SRM_RS06715 5434536c15497d1af84884432a69ed6c 494 PRINTS PR00147 DNA photolyase signature 363 381 3.4E-22 T 22-04-2016 IPR002081 Cryptochrome/DNA photolyase class 1 SRM_RS06715 5434536c15497d1af84884432a69ed6c 494 PRINTS PR00147 DNA photolyase signature 402 416 3.4E-22 T 22-04-2016 IPR002081 Cryptochrome/DNA photolyase class 1 SRM_RS06715 5434536c15497d1af84884432a69ed6c 494 PRINTS PR00147 DNA photolyase signature 343 359 3.4E-22 T 22-04-2016 IPR002081 Cryptochrome/DNA photolyase class 1 SRM_RS06715 5434536c15497d1af84884432a69ed6c 494 Pfam PF03441 FAD binding domain of DNA photolyase 295 484 7.0E-70 T 22-04-2016 IPR005101 Cryptochrome/DNA photolyase, FAD-binding domain SRM_RS06715 5434536c15497d1af84884432a69ed6c 494 ProSitePatterns PS00691 DNA photolyases class 1 signature 2. 363 382 - T 22-04-2016 IPR018394 Cryptochrome/DNA photolyase class 1, conserved site, C-terminal SRM_RS06715 5434536c15497d1af84884432a69ed6c 494 PANTHER PTHR11455:SF18 34 494 6.5E-144 T 22-04-2016 SRM_RS06715 5434536c15497d1af84884432a69ed6c 494 SUPERFAMILY SSF52425 34 202 9.03E-48 T 22-04-2016 IPR006050 DNA photolyase, N-terminal SRM_RS07105 0dfd365860ffb55084896c705b75d7f0 208 SUPERFAMILY SSF53335 15 194 4.66E-23 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SRM_RS07105 0dfd365860ffb55084896c705b75d7f0 208 Pfam PF08242 Methyltransferase domain 57 163 6.3E-10 T 22-04-2016 IPR013217 Methyltransferase type 12 SRM_RS07105 0dfd365860ffb55084896c705b75d7f0 208 Gene3D G3DSA:3.40.50.150 24 199 2.2E-18 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SRM_RS07105 0dfd365860ffb55084896c705b75d7f0 208 PANTHER PTHR10108 11 206 3.3E-14 T 22-04-2016 SRM_RS07105 0dfd365860ffb55084896c705b75d7f0 208 PANTHER PTHR10108:SF752 11 206 3.3E-14 T 22-04-2016 SRM_RS09300 e3033691726ec2845a6926a4e325648e 569 Gene3D G3DSA:1.10.390.10 361 507 8.5E-21 T 22-04-2016 SRM_RS09300 e3033691726ec2845a6926a4e325648e 569 PANTHER PTHR11533:SF163 61 512 2.4E-53 T 22-04-2016 SRM_RS09300 e3033691726ec2845a6926a4e325648e 569 SUPERFAMILY SSF55486 266 505 2.3E-44 T 22-04-2016 SRM_RS09300 e3033691726ec2845a6926a4e325648e 569 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 348 363 6.46E-5 T 22-04-2016 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 SRM_RS09300 e3033691726ec2845a6926a4e325648e 569 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 367 379 6.46E-5 T 22-04-2016 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 SRM_RS09300 e3033691726ec2845a6926a4e325648e 569 SUPERFAMILY SSF63737 60 253 3.92E-21 T 22-04-2016 SRM_RS09300 e3033691726ec2845a6926a4e325648e 569 PANTHER PTHR11533 61 512 2.4E-53 T 22-04-2016 IPR001930 Peptidase M1, alanine aminopeptidase/leukotriene A4 hydrolase GO:0006508 SRM_RS09300 e3033691726ec2845a6926a4e325648e 569 Pfam PF01433 Peptidase family M1 64 390 1.8E-29 T 22-04-2016 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 SRM_RS09820 d69f39b1b8b14322a01bc04674d72672 289 Pfam PF01738 Dienelactone hydrolase family 88 286 8.8E-49 T 22-04-2016 IPR002925 Dienelactone hydrolase GO:0016787 SRM_RS09820 d69f39b1b8b14322a01bc04674d72672 289 Gene3D G3DSA:3.40.50.1820 52 286 3.1E-51 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold SRM_RS09820 d69f39b1b8b14322a01bc04674d72672 289 PANTHER PTHR17630 50 287 2.2E-35 T 22-04-2016 SRM_RS09820 d69f39b1b8b14322a01bc04674d72672 289 SUPERFAMILY SSF53474 54 287 6.08E-41 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold SRM_RS08910 273aad04be630aa7696433146b9c4987 353 Pfam PF00154 recA bacterial DNA recombination protein 11 272 6.9E-138 T 22-04-2016 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 SRM_RS08910 273aad04be630aa7696433146b9c4987 353 SMART SM00382 61 232 2.5E-11 T 22-04-2016 IPR003593 AAA+ ATPase domain SRM_RS08910 273aad04be630aa7696433146b9c4987 353 SUPERFAMILY SSF54752 273 328 1.57E-18 T 22-04-2016 IPR023400 DNA recombination and repair protein RecA, C-terminal SRM_RS08910 273aad04be630aa7696433146b9c4987 353 PRINTS PR00142 RecA protein signature 97 126 4.1E-82 T 22-04-2016 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 SRM_RS08910 273aad04be630aa7696433146b9c4987 353 PRINTS PR00142 RecA protein signature 131 160 4.1E-82 T 22-04-2016 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 SRM_RS08910 273aad04be630aa7696433146b9c4987 353 PRINTS PR00142 RecA protein signature 214 242 4.1E-82 T 22-04-2016 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 SRM_RS08910 273aad04be630aa7696433146b9c4987 353 PRINTS PR00142 RecA protein signature 301 318 4.1E-82 T 22-04-2016 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 SRM_RS08910 273aad04be630aa7696433146b9c4987 353 PRINTS PR00142 RecA protein signature 169 198 4.1E-82 T 22-04-2016 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 SRM_RS08910 273aad04be630aa7696433146b9c4987 353 PRINTS PR00142 RecA protein signature 247 276 4.1E-82 T 22-04-2016 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 SRM_RS08910 273aad04be630aa7696433146b9c4987 353 Hamap MF_00268 Protein RecA [recA]. 9 333 50.826 T 22-04-2016 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 SRM_RS08910 273aad04be630aa7696433146b9c4987 353 SUPERFAMILY SSF52540 9 271 3.94E-66 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SRM_RS08910 273aad04be630aa7696433146b9c4987 353 ProSitePatterns PS00321 recA signature. 217 225 - T 22-04-2016 IPR020584 DNA recombination/repair protein RecA, conserved site GO:0003677|GO:0005524|GO:0006259|GO:0008094 SRM_RS08910 273aad04be630aa7696433146b9c4987 353 TIGRFAM TIGR02012 tigrfam_recA: protein RecA 9 327 6.8E-168 T 22-04-2016 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 SRM_RS08910 273aad04be630aa7696433146b9c4987 353 PANTHER PTHR22942 7 339 3.8E-193 T 22-04-2016 SRM_RS08910 273aad04be630aa7696433146b9c4987 353 Gene3D G3DSA:3.40.50.300 31 272 2.3E-83 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SRM_RS08910 273aad04be630aa7696433146b9c4987 353 PANTHER PTHR22942:SF1 7 339 3.8E-193 T 22-04-2016 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 SRM_RS08910 273aad04be630aa7696433146b9c4987 353 Gene3D G3DSA:3.30.250.10 273 329 2.6E-22 T 22-04-2016 IPR023400 DNA recombination and repair protein RecA, C-terminal SRM_RS07135 09490d84d4f43e77cfdf50b915bf81c7 203 PANTHER PTHR16301 1 195 1.6E-50 T 22-04-2016 IPR023582 Impact family SRM_RS07135 09490d84d4f43e77cfdf50b915bf81c7 203 SUPERFAMILY SSF54980 135 193 1.73E-7 T 22-04-2016 IPR009022 Elongation factor G, III-V domain SRM_RS07135 09490d84d4f43e77cfdf50b915bf81c7 203 Pfam PF01205 Uncharacterized protein family UPF0029 20 124 1.1E-27 T 22-04-2016 IPR001498 Impact, N-terminal SRM_RS07135 09490d84d4f43e77cfdf50b915bf81c7 203 Gene3D G3DSA:3.30.230.30 5 131 3.3E-41 T 22-04-2016 IPR001498 Impact, N-terminal SRM_RS07135 09490d84d4f43e77cfdf50b915bf81c7 203 ProSitePatterns PS00910 Uncharacterized protein family UPF0029 signature. 79 108 - T 22-04-2016 IPR020569 Uncharacterised protein family UPF0029, Impact, conserved site SRM_RS07135 09490d84d4f43e77cfdf50b915bf81c7 203 SUPERFAMILY SSF54211 3 132 7.21E-38 T 22-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold SRM_RS07135 09490d84d4f43e77cfdf50b915bf81c7 203 Gene3D G3DSA:3.30.70.240 135 191 3.0E-8 T 22-04-2016 IPR000640 Translation elongation factor EFG, V domain SRM_RS07135 09490d84d4f43e77cfdf50b915bf81c7 203 PANTHER PTHR16301:SF0 1 195 1.6E-50 T 22-04-2016 SRM_RS07135 09490d84d4f43e77cfdf50b915bf81c7 203 Pfam PF09186 Domain of unknown function (DUF1949) 140 195 1.2E-12 T 22-04-2016 IPR015269 Uncharacterised domain UPF0029, Impact, C-terminal SRM_RS15030 9846901f548fe20d9712b0e5ecb86d0b 959 Pfam PF00326 Prolyl oligopeptidase family 751 931 6.4E-27 T 22-04-2016 IPR001375 Peptidase S9, prolyl oligopeptidase, catalytic domain GO:0006508|GO:0008236 SRM_RS15030 9846901f548fe20d9712b0e5ecb86d0b 959 PANTHER PTHR11731:SF142 141 148 4.4E-64 T 22-04-2016 SRM_RS15030 9846901f548fe20d9712b0e5ecb86d0b 959 PANTHER PTHR11731:SF142 574 942 4.4E-64 T 22-04-2016 SRM_RS15030 9846901f548fe20d9712b0e5ecb86d0b 959 Gene3D G3DSA:3.40.50.1820 677 932 4.9E-52 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold SRM_RS15030 9846901f548fe20d9712b0e5ecb86d0b 959 Gene3D G3DSA:2.120.10.30 78 279 7.5E-18 T 22-04-2016 IPR011042 Six-bladed beta-propeller, TolB-like SRM_RS15030 9846901f548fe20d9712b0e5ecb86d0b 959 Gene3D G3DSA:2.120.10.30 445 502 7.5E-18 T 22-04-2016 IPR011042 Six-bladed beta-propeller, TolB-like SRM_RS15030 9846901f548fe20d9712b0e5ecb86d0b 959 SUPERFAMILY SSF82171 72 278 1.71E-13 T 22-04-2016 SRM_RS15030 9846901f548fe20d9712b0e5ecb86d0b 959 SUPERFAMILY SSF82171 453 557 1.71E-13 T 22-04-2016 SRM_RS15030 9846901f548fe20d9712b0e5ecb86d0b 959 SUPERFAMILY SSF53474 677 931 6.81E-50 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold SRM_RS15030 9846901f548fe20d9712b0e5ecb86d0b 959 PANTHER PTHR11731 141 148 4.4E-64 T 22-04-2016 SRM_RS15030 9846901f548fe20d9712b0e5ecb86d0b 959 PANTHER PTHR11731 574 942 4.4E-64 T 22-04-2016 SRM_RS07735 2805c277def710c5d3cc37861e979395 438 TIGRFAM TIGR02669 SpoIID_LytB: SpoIID/LytB domain 153 410 3.2E-61 T 22-04-2016 IPR013486 Sporulation stage II protein D, amidase enhancer LytB GO:0030435 SRM_RS07735 2805c277def710c5d3cc37861e979395 438 Pfam PF08486 Stage II sporulation protein 149 236 7.2E-16 T 22-04-2016 IPR013693 Sporulation stage II protein D, amidase enhancer LytB N-terminal SRM_RS07735 2805c277def710c5d3cc37861e979395 438 PANTHER PTHR30032:SF4 147 414 6.3E-43 T 22-04-2016 SRM_RS07735 2805c277def710c5d3cc37861e979395 438 PANTHER PTHR30032 147 414 6.3E-43 T 22-04-2016 SRM_RS01080 2da8a1fa23a90da958ad56a6e1be6fe1 308 ProSitePatterns PS01272 Glucokinase regulatory protein family signature. 194 211 - T 22-04-2016 IPR005486 Glucokinase regulatory protein, conserved site KEGG: 00030+4.2.1.12|KEGG: 00520+4.2.1.126|UniPathway: UPA00342 SRM_RS01080 2da8a1fa23a90da958ad56a6e1be6fe1 308 Pfam PF13580 SIS domain 51 164 3.1E-8 T 22-04-2016 IPR001347 Sugar isomerase (SIS) GO:0005975|GO:0030246 Reactome: REACT_17015 SRM_RS01080 2da8a1fa23a90da958ad56a6e1be6fe1 308 PANTHER PTHR10088 8 308 3.6E-124 T 22-04-2016 SRM_RS01080 2da8a1fa23a90da958ad56a6e1be6fe1 308 Gene3D G3DSA:3.40.50.10490 9 258 9.2E-80 T 22-04-2016 SRM_RS01080 2da8a1fa23a90da958ad56a6e1be6fe1 308 TIGRFAM TIGR00274 TIGR00274: N-acetylmuramic acid 6-phosphate etherase 14 305 1.2E-113 T 22-04-2016 IPR005488 N-acetylmuramic acid 6-phosphate etherase MurQ GO:0016835|GO:0046348 KEGG: 00030+4.2.1.12|KEGG: 00520+4.2.1.126|UniPathway: UPA00342 SRM_RS01080 2da8a1fa23a90da958ad56a6e1be6fe1 308 Hamap MF_00068 N-acetylmuramic acid 6-phosphate etherase [murQ]. 10 304 41.333 T 22-04-2016 IPR005488 N-acetylmuramic acid 6-phosphate etherase MurQ GO:0016835|GO:0046348 KEGG: 00030+4.2.1.12|KEGG: 00520+4.2.1.126|UniPathway: UPA00342 SRM_RS01080 2da8a1fa23a90da958ad56a6e1be6fe1 308 SUPERFAMILY SSF53697 14 257 4.45E-63 T 22-04-2016 SRM_RS06620 d5b658e476ef2edb4cac0844d5207489 143 Gene3D G3DSA:3.30.420.140 8 141 5.1E-34 T 22-04-2016 IPR006641 YqgF/RNase H-like domain GO:0006139 SRM_RS06620 d5b658e476ef2edb4cac0844d5207489 143 PANTHER PTHR33317 9 140 1.2E-24 T 22-04-2016 SRM_RS06620 d5b658e476ef2edb4cac0844d5207489 143 Hamap MF_00651 Putative pre-16S rRNA nuclease [yqgF]. 8 143 20.271 T 22-04-2016 IPR005227 Putative pre-16S rRNA nuclease GO:0006364 SRM_RS06620 d5b658e476ef2edb4cac0844d5207489 143 SUPERFAMILY SSF53098 9 141 4.1E-30 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 SRM_RS06620 d5b658e476ef2edb4cac0844d5207489 143 SMART SM00732 8 106 7.4E-16 T 22-04-2016 IPR006641 YqgF/RNase H-like domain GO:0006139 SRM_RS06620 d5b658e476ef2edb4cac0844d5207489 143 Pfam PF03652 Holliday junction resolvase 9 140 6.7E-33 T 22-04-2016 IPR005227 Putative pre-16S rRNA nuclease GO:0006364 SRM_RS06620 d5b658e476ef2edb4cac0844d5207489 143 TIGRFAM TIGR00250 RNAse_H_YqgF: putative transcription antitermination factor YqgF 12 140 7.3E-20 T 22-04-2016 IPR005227 Putative pre-16S rRNA nuclease GO:0006364 SRM_RS10200 3985877f6983b7b5f2d42141f55c52b0 515 Gene3D G3DSA:2.60.40.920 134 208 1.6E-9 T 22-04-2016 IPR003344 Big-1 (bacterial Ig-like domain 1) domain SRM_RS10200 3985877f6983b7b5f2d42141f55c52b0 515 Gene3D G3DSA:2.60.40.920 251 320 3.9E-6 T 22-04-2016 IPR003344 Big-1 (bacterial Ig-like domain 1) domain SRM_RS10200 3985877f6983b7b5f2d42141f55c52b0 515 Pfam PF13620 Carboxypeptidase regulatory-like domain 18 103 5.2E-8 T 22-04-2016 SRM_RS10200 3985877f6983b7b5f2d42141f55c52b0 515 Gene3D G3DSA:2.60.40.1120 19 111 5.2E-7 T 22-04-2016 IPR014766 Carboxypeptidase, regulatory domain SRM_RS10200 3985877f6983b7b5f2d42141f55c52b0 515 SUPERFAMILY SSF49373 250 321 4.97E-5 T 22-04-2016 IPR008964 Invasin/intimin cell-adhesion fragments SRM_RS10200 3985877f6983b7b5f2d42141f55c52b0 515 SUPERFAMILY SSF49373 134 208 1.41E-8 T 22-04-2016 IPR008964 Invasin/intimin cell-adhesion fragments SRM_RS10200 3985877f6983b7b5f2d42141f55c52b0 515 SUPERFAMILY SSF49464 18 107 7.46E-7 T 22-04-2016 IPR008969 Carboxypeptidase-like, regulatory domain SRM_RS08305 d633114ee799ee1129c9d7f19a30e51e 146 Gene3D G3DSA:2.40.40.20 1 119 5.0E-53 T 22-04-2016 SRM_RS08305 d633114ee799ee1129c9d7f19a30e51e 146 PANTHER PTHR21012:SF0 2 133 3.1E-63 T 22-04-2016 SRM_RS08305 d633114ee799ee1129c9d7f19a30e51e 146 Hamap MF_00446 Aspartate 1-decarboxylase [panD]. 1 128 67.21 T 22-04-2016 IPR003190 Aspartate decarboxylase GO:0004068|GO:0006523 KEGG: 00410+4.1.1.11|KEGG: 00770+4.1.1.11|MetaCyc: PWY-5155|UniPathway: UPA00028 SRM_RS08305 d633114ee799ee1129c9d7f19a30e51e 146 Pfam PF02261 Aspartate decarboxylase 1 114 1.4E-50 T 22-04-2016 IPR003190 Aspartate decarboxylase GO:0004068|GO:0006523 KEGG: 00410+4.1.1.11|KEGG: 00770+4.1.1.11|MetaCyc: PWY-5155|UniPathway: UPA00028 SRM_RS08305 d633114ee799ee1129c9d7f19a30e51e 146 ProDom PD009294 ASPARTATE 1-DECARBOXYLASE DECARBOXYLASE CHAIN LYASE ALPHA ALPHA- CONTAINS: PRECURSOR BETA 5 98 1.0E-30 T 22-04-2016 IPR003190 Aspartate decarboxylase GO:0004068|GO:0006523 KEGG: 00410+4.1.1.11|KEGG: 00770+4.1.1.11|MetaCyc: PWY-5155|UniPathway: UPA00028 SRM_RS08305 d633114ee799ee1129c9d7f19a30e51e 146 PANTHER PTHR21012 2 133 3.1E-63 T 22-04-2016 IPR003190 Aspartate decarboxylase GO:0004068|GO:0006523 KEGG: 00410+4.1.1.11|KEGG: 00770+4.1.1.11|MetaCyc: PWY-5155|UniPathway: UPA00028 SRM_RS08305 d633114ee799ee1129c9d7f19a30e51e 146 SUPERFAMILY SSF50692 1 116 1.24E-46 T 22-04-2016 IPR009010 Aspartate decarboxylase-like domain SRM_RS08305 d633114ee799ee1129c9d7f19a30e51e 146 TIGRFAM TIGR00223 panD: aspartate 1-decarboxylase 1 118 2.4E-46 T 22-04-2016 IPR003190 Aspartate decarboxylase GO:0004068|GO:0006523 KEGG: 00410+4.1.1.11|KEGG: 00770+4.1.1.11|MetaCyc: PWY-5155|UniPathway: UPA00028 SRM_RS08305 d633114ee799ee1129c9d7f19a30e51e 146 PIRSF PIRSF006246 1 134 1.2E-51 T 22-04-2016 IPR003190 Aspartate decarboxylase GO:0004068|GO:0006523 KEGG: 00410+4.1.1.11|KEGG: 00770+4.1.1.11|MetaCyc: PWY-5155|UniPathway: UPA00028 SRM_RS14195 8641b08d6ce102448c464c63b8068434 751 SUPERFAMILY SSF56935 113 749 8.09E-77 T 22-04-2016 SRM_RS14195 8641b08d6ce102448c464c63b8068434 751 Gene3D G3DSA:2.60.40.1120 30 114 7.5E-22 T 22-04-2016 IPR014766 Carboxypeptidase, regulatory domain SRM_RS14195 8641b08d6ce102448c464c63b8068434 751 SUPERFAMILY SSF49464 30 119 8.63E-20 T 22-04-2016 IPR008969 Carboxypeptidase-like, regulatory domain SRM_RS14195 8641b08d6ce102448c464c63b8068434 751 Gene3D G3DSA:2.170.130.10 115 235 1.6E-29 T 22-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 SRM_RS14195 8641b08d6ce102448c464c63b8068434 751 PANTHER PTHR30069:SF2 20 538 1.6E-44 T 22-04-2016 SRM_RS14195 8641b08d6ce102448c464c63b8068434 751 PANTHER PTHR30069 20 538 1.6E-44 T 22-04-2016 SRM_RS14195 8641b08d6ce102448c464c63b8068434 751 Pfam PF00593 TonB dependent receptor 475 749 5.1E-21 T 22-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 SRM_RS14195 8641b08d6ce102448c464c63b8068434 751 Gene3D G3DSA:2.40.170.20 236 749 3.4E-55 T 22-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 SRM_RS14195 8641b08d6ce102448c464c63b8068434 751 Pfam PF13715 CarboxypepD_reg-like domain 31 116 7.8E-21 T 22-04-2016 SRM_RS14195 8641b08d6ce102448c464c63b8068434 751 Pfam PF07715 TonB-dependent Receptor Plug Domain 126 232 2.6E-19 T 22-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 SRM_RS11645 2ae7ba1e9eceae022c0491c444d2d9b2 942 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 827 928 7.5E-23 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SRM_RS11645 2ae7ba1e9eceae022c0491c444d2d9b2 942 Pfam PF00512 His Kinase A (phospho-acceptor) domain 707 772 2.1E-14 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SRM_RS11645 2ae7ba1e9eceae022c0491c444d2d9b2 942 Pfam PF13426 PAS domain 225 313 0.058 T 22-04-2016 IPR000014 PAS domain SRM_RS11645 2ae7ba1e9eceae022c0491c444d2d9b2 942 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 446 572 3.1E-14 T 22-04-2016 IPR000014 PAS domain SRM_RS11645 2ae7ba1e9eceae022c0491c444d2d9b2 942 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 194 320 1.1E-8 T 22-04-2016 IPR000014 PAS domain SRM_RS11645 2ae7ba1e9eceae022c0491c444d2d9b2 942 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 319 445 5.8E-30 T 22-04-2016 IPR000014 PAS domain SRM_RS11645 2ae7ba1e9eceae022c0491c444d2d9b2 942 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 566 693 1.1E-12 T 22-04-2016 IPR000014 PAS domain SRM_RS11645 2ae7ba1e9eceae022c0491c444d2d9b2 942 Gene3D G3DSA:1.10.287.130 698 769 2.8E-17 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SRM_RS11645 2ae7ba1e9eceae022c0491c444d2d9b2 942 Pfam PF08448 PAS fold 456 567 7.9E-10 T 22-04-2016 IPR013656 PAS fold-4 SRM_RS11645 2ae7ba1e9eceae022c0491c444d2d9b2 942 Pfam PF08448 PAS fold 329 439 2.7E-15 T 22-04-2016 IPR013656 PAS fold-4 SRM_RS11645 2ae7ba1e9eceae022c0491c444d2d9b2 942 Pfam PF08448 PAS fold 577 686 1.9E-13 T 22-04-2016 IPR013656 PAS fold-4 SRM_RS11645 2ae7ba1e9eceae022c0491c444d2d9b2 942 PANTHER PTHR24423 306 525 2.5E-113 T 22-04-2016 SRM_RS11645 2ae7ba1e9eceae022c0491c444d2d9b2 942 PANTHER PTHR24423 645 938 2.5E-113 T 22-04-2016 SRM_RS11645 2ae7ba1e9eceae022c0491c444d2d9b2 942 SUPERFAMILY SSF55785 435 563 1.74E-18 T 22-04-2016 IPR000014 PAS domain SRM_RS11645 2ae7ba1e9eceae022c0491c444d2d9b2 942 SMART SM00388 706 773 3.8E-18 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SRM_RS11645 2ae7ba1e9eceae022c0491c444d2d9b2 942 Gene3D G3DSA:3.30.450.20 436 562 2.0E-19 T 22-04-2016 SRM_RS11645 2ae7ba1e9eceae022c0491c444d2d9b2 942 Gene3D G3DSA:3.30.450.20 190 311 3.8E-15 T 22-04-2016 SRM_RS11645 2ae7ba1e9eceae022c0491c444d2d9b2 942 SMART SM00387 819 931 4.2E-31 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SRM_RS11645 2ae7ba1e9eceae022c0491c444d2d9b2 942 PRINTS PR00344 Bacterial sensor protein C-terminal signature 856 870 1.1E-15 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SRM_RS11645 2ae7ba1e9eceae022c0491c444d2d9b2 942 PRINTS PR00344 Bacterial sensor protein C-terminal signature 891 909 1.1E-15 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SRM_RS11645 2ae7ba1e9eceae022c0491c444d2d9b2 942 PRINTS PR00344 Bacterial sensor protein C-terminal signature 915 928 1.1E-15 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SRM_RS11645 2ae7ba1e9eceae022c0491c444d2d9b2 942 PRINTS PR00344 Bacterial sensor protein C-terminal signature 874 884 1.1E-15 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SRM_RS11645 2ae7ba1e9eceae022c0491c444d2d9b2 942 SMART SM00091 322 388 7.5E-12 T 22-04-2016 IPR000014 PAS domain SRM_RS11645 2ae7ba1e9eceae022c0491c444d2d9b2 942 SMART SM00091 570 636 0.0032 T 22-04-2016 IPR000014 PAS domain SRM_RS11645 2ae7ba1e9eceae022c0491c444d2d9b2 942 SMART SM00091 450 520 0.25 T 22-04-2016 IPR000014 PAS domain SRM_RS11645 2ae7ba1e9eceae022c0491c444d2d9b2 942 SMART SM00091 197 268 300.0 T 22-04-2016 IPR000014 PAS domain SRM_RS11645 2ae7ba1e9eceae022c0491c444d2d9b2 942 SUPERFAMILY SSF47384 691 773 4.51E-18 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SRM_RS11645 2ae7ba1e9eceae022c0491c444d2d9b2 942 SMART SM00086 398 438 0.0016 T 22-04-2016 IPR001610 PAC motif SRM_RS11645 2ae7ba1e9eceae022c0491c444d2d9b2 942 SMART SM00086 274 314 11.0 T 22-04-2016 IPR001610 PAC motif SRM_RS11645 2ae7ba1e9eceae022c0491c444d2d9b2 942 SMART SM00086 645 686 15.0 T 22-04-2016 IPR001610 PAC motif SRM_RS11645 2ae7ba1e9eceae022c0491c444d2d9b2 942 Gene3D G3DSA:3.30.450.20 563 676 4.8E-17 T 22-04-2016 SRM_RS11645 2ae7ba1e9eceae022c0491c444d2d9b2 942 SUPERFAMILY SSF55785 562 684 5.39E-15 T 22-04-2016 IPR000014 PAS domain SRM_RS11645 2ae7ba1e9eceae022c0491c444d2d9b2 942 SUPERFAMILY SSF55874 762 929 1.17E-40 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SRM_RS11645 2ae7ba1e9eceae022c0491c444d2d9b2 942 Gene3D G3DSA:3.30.565.10 779 932 3.1E-39 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SRM_RS11645 2ae7ba1e9eceae022c0491c444d2d9b2 942 SUPERFAMILY SSF55785 223 322 7.78E-14 T 22-04-2016 IPR000014 PAS domain SRM_RS11645 2ae7ba1e9eceae022c0491c444d2d9b2 942 Gene3D G3DSA:3.30.450.20 312 435 5.6E-27 T 22-04-2016 SRM_RS11645 2ae7ba1e9eceae022c0491c444d2d9b2 942 SUPERFAMILY SSF55785 333 447 1.02E-30 T 22-04-2016 IPR000014 PAS domain SRM_RS07060 6f85e3ae72b46d4dd76e8572145a6500 203 Pfam PF01725 Ham1 family 7 191 1.9E-51 T 22-04-2016 IPR002637 Ham1-like protein GO:0016787 KEGG: 00230+3.6.1.19|KEGG: 00240+3.6.1.19|KEGG: 00983+3.6.1.19|MetaCyc: PWY-7206 SRM_RS07060 6f85e3ae72b46d4dd76e8572145a6500 203 TIGRFAM TIGR00042 TIGR00042: non-canonical purine NTP pyrophosphatase, RdgB/HAM1 family 7 194 1.8E-50 T 22-04-2016 IPR002637 Ham1-like protein GO:0016787 KEGG: 00230+3.6.1.19|KEGG: 00240+3.6.1.19|KEGG: 00983+3.6.1.19|MetaCyc: PWY-7206 SRM_RS07060 6f85e3ae72b46d4dd76e8572145a6500 203 PANTHER PTHR11067 1 202 1.1E-69 T 22-04-2016 IPR002637 Ham1-like protein GO:0016787 KEGG: 00230+3.6.1.19|KEGG: 00240+3.6.1.19|KEGG: 00983+3.6.1.19|MetaCyc: PWY-7206 SRM_RS07060 6f85e3ae72b46d4dd76e8572145a6500 203 SUPERFAMILY SSF52972 5 195 2.09E-63 T 22-04-2016 IPR029001 Inosine triphosphate pyrophosphatase-like SRM_RS07060 6f85e3ae72b46d4dd76e8572145a6500 203 PANTHER PTHR11067:SF9 1 202 1.1E-69 T 22-04-2016 SRM_RS07060 6f85e3ae72b46d4dd76e8572145a6500 203 Hamap MF_01405 dITP/XTP pyrophosphatase [rdgB]. 5 196 43.911 T 22-04-2016 IPR020922 Non-canonical purine NTP pyrophosphatase GO:0009143|GO:0017111 KEGG: 00230+3.6.1.19|KEGG: 00240+3.6.1.19|KEGG: 00983+3.6.1.19|MetaCyc: PWY-7206 SRM_RS07060 6f85e3ae72b46d4dd76e8572145a6500 203 Gene3D G3DSA:3.90.950.10 3 195 3.4E-70 T 22-04-2016 IPR029001 Inosine triphosphate pyrophosphatase-like SRM_RS12510 8ab86df0c1862a2c1adc9c0b567c447e 377 Gene3D G3DSA:3.40.50.300 156 253 7.3E-8 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SRM_RS12510 8ab86df0c1862a2c1adc9c0b567c447e 377 SUPERFAMILY SSF52540 160 333 5.24E-5 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SRM_RS04615 02ea70b98c108e82611e684dbf7ab4f7 280 Gene3D G3DSA:3.40.50.620 113 267 3.0E-28 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold SRM_RS04615 02ea70b98c108e82611e684dbf7ab4f7 280 PANTHER PTHR31964 112 266 2.4E-13 T 22-04-2016 SRM_RS04615 02ea70b98c108e82611e684dbf7ab4f7 280 Pfam PF00582 Universal stress protein family 128 266 3.0E-19 T 22-04-2016 IPR006016 UspA GO:0006950 SRM_RS04615 02ea70b98c108e82611e684dbf7ab4f7 280 SUPERFAMILY SSF52402 127 266 1.34E-23 T 22-04-2016 SRM_RS04615 02ea70b98c108e82611e684dbf7ab4f7 280 PRINTS PR01438 Universal stress protein signature 127 145 1.4E-5 T 22-04-2016 IPR006015 Universal stress protein A SRM_RS04615 02ea70b98c108e82611e684dbf7ab4f7 280 PRINTS PR01438 Universal stress protein signature 227 239 1.4E-5 T 22-04-2016 IPR006015 Universal stress protein A SRM_RS04615 02ea70b98c108e82611e684dbf7ab4f7 280 PRINTS PR01438 Universal stress protein signature 244 266 1.4E-5 T 22-04-2016 IPR006015 Universal stress protein A SRM_RS03835 5dbd23e6abc9967f56dfd9068a40fe49 465 Gene3D G3DSA:3.30.565.10 308 461 7.1E-51 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SRM_RS03835 5dbd23e6abc9967f56dfd9068a40fe49 465 SMART SM00304 176 229 8.2E-8 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 SRM_RS03835 5dbd23e6abc9967f56dfd9068a40fe49 465 SUPERFAMILY SSF158472 177 227 1.44E-6 T 22-04-2016 SRM_RS03835 5dbd23e6abc9967f56dfd9068a40fe49 465 SMART SM00387 347 458 3.4E-40 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SRM_RS03835 5dbd23e6abc9967f56dfd9068a40fe49 465 PANTHER PTHR24423 25 42 2.1E-88 T 22-04-2016 SRM_RS03835 5dbd23e6abc9967f56dfd9068a40fe49 465 PANTHER PTHR24423 170 461 2.1E-88 T 22-04-2016 SRM_RS03835 5dbd23e6abc9967f56dfd9068a40fe49 465 Pfam PF00512 His Kinase A (phospho-acceptor) domain 238 301 1.2E-14 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SRM_RS03835 5dbd23e6abc9967f56dfd9068a40fe49 465 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 348 457 1.1E-27 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SRM_RS03835 5dbd23e6abc9967f56dfd9068a40fe49 465 Pfam PF00672 HAMP domain 157 225 1.8E-12 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 SRM_RS03835 5dbd23e6abc9967f56dfd9068a40fe49 465 SUPERFAMILY SSF55874 292 456 1.31E-47 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SRM_RS03835 5dbd23e6abc9967f56dfd9068a40fe49 465 SMART SM00388 237 303 5.1E-17 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SRM_RS03835 5dbd23e6abc9967f56dfd9068a40fe49 465 PRINTS PR00344 Bacterial sensor protein C-terminal signature 401 411 1.1E-18 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SRM_RS03835 5dbd23e6abc9967f56dfd9068a40fe49 465 PRINTS PR00344 Bacterial sensor protein C-terminal signature 418 436 1.1E-18 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SRM_RS03835 5dbd23e6abc9967f56dfd9068a40fe49 465 PRINTS PR00344 Bacterial sensor protein C-terminal signature 383 397 1.1E-18 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SRM_RS03835 5dbd23e6abc9967f56dfd9068a40fe49 465 PRINTS PR00344 Bacterial sensor protein C-terminal signature 442 455 1.1E-18 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SRM_RS03835 5dbd23e6abc9967f56dfd9068a40fe49 465 Gene3D G3DSA:1.10.287.130 228 299 3.5E-16 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SRM_RS03835 5dbd23e6abc9967f56dfd9068a40fe49 465 SUPERFAMILY SSF47384 222 302 5.3E-18 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SRM_RS14605 bbc438005509b0f3bc3a717e3df64af0 157 SUPERFAMILY SSF53098 24 147 5.82E-8 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 SRM_RS14605 bbc438005509b0f3bc3a717e3df64af0 157 Pfam PF13358 DDE superfamily endonuclease 17 127 3.8E-20 T 22-04-2016 SRM_RS06655 77c42f973e25729aa9a1ce5e30855e71 383 Pfam PF12038 Domain of unknown function (DUF3524) 2 173 4.3E-57 T 22-04-2016 IPR022701 Glycosyltransferase family 1, N-terminal SRM_RS06655 77c42f973e25729aa9a1ce5e30855e71 383 SUPERFAMILY SSF53756 27 375 3.09E-31 T 22-04-2016 SRM_RS06655 77c42f973e25729aa9a1ce5e30855e71 383 PANTHER PTHR13615:SF3 1 380 5.0E-79 T 22-04-2016 SRM_RS06655 77c42f973e25729aa9a1ce5e30855e71 383 PANTHER PTHR13615 1 380 5.0E-79 T 22-04-2016 SRM_RS06655 77c42f973e25729aa9a1ce5e30855e71 383 Gene3D G3DSA:3.40.50.2000 189 312 7.7E-9 T 22-04-2016 SRM_RS06655 77c42f973e25729aa9a1ce5e30855e71 383 Pfam PF00534 Glycosyl transferases group 1 193 345 4.2E-10 T 22-04-2016 IPR001296 Glycosyl transferase, family 1 SRM_RS10380 f75e1fd7fa8fb741d07dfc11936c6b5c 1141 SUPERFAMILY SSF52980 942 1110 8.04E-14 T 22-04-2016 IPR011335 Restriction endonuclease type II-like SRM_RS10380 f75e1fd7fa8fb741d07dfc11936c6b5c 1141 SUPERFAMILY SSF52540 30 192 1.16E-100 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SRM_RS10380 f75e1fd7fa8fb741d07dfc11936c6b5c 1141 SUPERFAMILY SSF52540 854 892 1.16E-100 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SRM_RS10380 f75e1fd7fa8fb741d07dfc11936c6b5c 1141 SUPERFAMILY SSF52540 329 795 1.16E-100 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SRM_RS10380 f75e1fd7fa8fb741d07dfc11936c6b5c 1141 Pfam PF00580 UvrD/REP helicase N-terminal domain 37 446 1.6E-48 T 22-04-2016 IPR014016 UvrD-like Helicase, ATP-binding domain GO:0005524 SRM_RS10380 f75e1fd7fa8fb741d07dfc11936c6b5c 1141 Pfam PF12705 PD-(D/E)XK nuclease superfamily 965 1112 4.7E-7 T 22-04-2016 SRM_RS10380 f75e1fd7fa8fb741d07dfc11936c6b5c 1141 Gene3D G3DSA:3.40.50.300 462 593 2.1E-37 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SRM_RS10380 f75e1fd7fa8fb741d07dfc11936c6b5c 1141 Gene3D G3DSA:3.40.50.300 762 935 2.1E-37 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SRM_RS10380 f75e1fd7fa8fb741d07dfc11936c6b5c 1141 Gene3D G3DSA:3.90.320.10 1040 1110 1.0E-5 T 22-04-2016 IPR011604 Exonuclease, phage-type/RecB, C-terminal GO:0003677|GO:0004518 SRM_RS10380 f75e1fd7fa8fb741d07dfc11936c6b5c 1141 Gene3D G3DSA:3.40.50.300 121 184 1.3E-53 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SRM_RS10380 f75e1fd7fa8fb741d07dfc11936c6b5c 1141 Gene3D G3DSA:3.40.50.300 35 88 1.3E-53 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SRM_RS10380 f75e1fd7fa8fb741d07dfc11936c6b5c 1141 Gene3D G3DSA:3.40.50.300 339 451 1.3E-53 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SRM_RS10380 f75e1fd7fa8fb741d07dfc11936c6b5c 1141 Pfam PF13361 UvrD-like helicase C-terminal domain 459 877 1.3E-21 T 22-04-2016 IPR014017 UvrD-like DNA helicase, C-terminal GO:0005524|GO:0016787 SRM_RS10380 f75e1fd7fa8fb741d07dfc11936c6b5c 1141 Gene3D G3DSA:1.10.486.10 601 707 1.3E-6 T 22-04-2016 SRM_RS10380 f75e1fd7fa8fb741d07dfc11936c6b5c 1141 PANTHER PTHR11070 853 900 4.7E-91 T 22-04-2016 IPR000212 DNA helicase, UvrD/REP type GO:0003677|GO:0004003|GO:0005524 SRM_RS10380 f75e1fd7fa8fb741d07dfc11936c6b5c 1141 PANTHER PTHR11070 747 811 4.7E-91 T 22-04-2016 IPR000212 DNA helicase, UvrD/REP type GO:0003677|GO:0004003|GO:0005524 SRM_RS10380 f75e1fd7fa8fb741d07dfc11936c6b5c 1141 PANTHER PTHR11070 36 212 4.7E-91 T 22-04-2016 IPR000212 DNA helicase, UvrD/REP type GO:0003677|GO:0004003|GO:0005524 SRM_RS10380 f75e1fd7fa8fb741d07dfc11936c6b5c 1141 PANTHER PTHR11070 304 709 4.7E-91 T 22-04-2016 IPR000212 DNA helicase, UvrD/REP type GO:0003677|GO:0004003|GO:0005524 SRM_RS05795 08aaa0ec3e83e8f9c7d5cec63f545a8b 514 Pfam PF01336 OB-fold nucleic acid binding domain 64 138 8.8E-15 T 22-04-2016 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type GO:0003676 SRM_RS05795 08aaa0ec3e83e8f9c7d5cec63f545a8b 514 Gene3D G3DSA:2.40.50.140 9 152 2.5E-39 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold SRM_RS05795 08aaa0ec3e83e8f9c7d5cec63f545a8b 514 PANTHER PTHR22594:SF4 6 514 2.6E-227 T 22-04-2016 SRM_RS05795 08aaa0ec3e83e8f9c7d5cec63f545a8b 514 Pfam PF00152 tRNA synthetases class II (D, K and N) 167 510 2.9E-75 T 22-04-2016 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 SRM_RS05795 08aaa0ec3e83e8f9c7d5cec63f545a8b 514 SUPERFAMILY SSF55681 167 511 1.6E-108 T 22-04-2016 SRM_RS05795 08aaa0ec3e83e8f9c7d5cec63f545a8b 514 TIGRFAM TIGR00499 lysS_bact: lysine--tRNA ligase 8 513 1.9E-171 T 22-04-2016 IPR002313 Lysine-tRNA ligase, class II GO:0004824|GO:0005524|GO:0006430 KEGG: 00970+6.1.1.6 SRM_RS05795 08aaa0ec3e83e8f9c7d5cec63f545a8b 514 SUPERFAMILY SSF50249 7 152 6.86E-35 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold SRM_RS05795 08aaa0ec3e83e8f9c7d5cec63f545a8b 514 PRINTS PR00982 Lysyl-tRNA synthetase signature 204 214 2.2E-35 T 22-04-2016 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6 SRM_RS05795 08aaa0ec3e83e8f9c7d5cec63f545a8b 514 PRINTS PR00982 Lysyl-tRNA synthetase signature 391 407 2.2E-35 T 22-04-2016 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6 SRM_RS05795 08aaa0ec3e83e8f9c7d5cec63f545a8b 514 PRINTS PR00982 Lysyl-tRNA synthetase signature 267 284 2.2E-35 T 22-04-2016 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6 SRM_RS05795 08aaa0ec3e83e8f9c7d5cec63f545a8b 514 PRINTS PR00982 Lysyl-tRNA synthetase signature 249 262 2.2E-35 T 22-04-2016 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6 SRM_RS05795 08aaa0ec3e83e8f9c7d5cec63f545a8b 514 PRINTS PR00982 Lysyl-tRNA synthetase signature 220 236 2.2E-35 T 22-04-2016 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6 SRM_RS05795 08aaa0ec3e83e8f9c7d5cec63f545a8b 514 Hamap MF_00252 Lysine--tRNA ligase [lysS]. 14 513 40.662 T 22-04-2016 IPR002313 Lysine-tRNA ligase, class II GO:0004824|GO:0005524|GO:0006430 KEGG: 00970+6.1.1.6 SRM_RS05795 08aaa0ec3e83e8f9c7d5cec63f545a8b 514 PANTHER PTHR22594 6 514 2.6E-227 T 22-04-2016 IPR018150 Aminoacyl-tRNA synthetase, class II (D/K/N)-like GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 SRM_RS05795 08aaa0ec3e83e8f9c7d5cec63f545a8b 514 Gene3D G3DSA:3.30.930.10 166 508 3.1E-109 T 22-04-2016 SRM_RS14770 00f75760115098a4eb8ffeac03241c25 357 Pfam PF13692 Glycosyl transferases group 1 169 313 5.6E-24 T 22-04-2016 SRM_RS14770 00f75760115098a4eb8ffeac03241c25 357 Gene3D G3DSA:3.40.50.2000 166 326 5.0E-25 T 22-04-2016 SRM_RS14770 00f75760115098a4eb8ffeac03241c25 357 PANTHER PTHR12526 115 351 1.6E-37 T 22-04-2016 SRM_RS14770 00f75760115098a4eb8ffeac03241c25 357 SUPERFAMILY SSF53756 26 346 1.84E-52 T 22-04-2016 SRM_RS01985 2d8cde598c663d84f7ff043181d79db4 632 SUPERFAMILY SSF52402 228 387 9.07E-33 T 22-04-2016 SRM_RS01985 2d8cde598c663d84f7ff043181d79db4 632 SUPERFAMILY SSF52402 486 620 9.07E-33 T 22-04-2016 SRM_RS01985 2d8cde598c663d84f7ff043181d79db4 632 Pfam PF00733 Asparagine synthase 240 626 3.8E-36 T 22-04-2016 IPR001962 Asparagine synthase GO:0004066|GO:0006529 SRM_RS01985 2d8cde598c663d84f7ff043181d79db4 632 Gene3D G3DSA:3.40.50.620 452 627 5.9E-37 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold SRM_RS01985 2d8cde598c663d84f7ff043181d79db4 632 Gene3D G3DSA:3.40.50.620 221 382 5.9E-37 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold SRM_RS01985 2d8cde598c663d84f7ff043181d79db4 632 Pfam PF13537 Glutamine amidotransferase domain 54 165 1.9E-25 T 22-04-2016 IPR017932 Glutamine amidotransferase type 2 domain SRM_RS01985 2d8cde598c663d84f7ff043181d79db4 632 Gene3D G3DSA:3.60.20.10 1 220 5.8E-48 T 22-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal SRM_RS01985 2d8cde598c663d84f7ff043181d79db4 632 PIRSF PIRSF001589 1 631 4.9E-74 T 22-04-2016 SRM_RS01985 2d8cde598c663d84f7ff043181d79db4 632 SUPERFAMILY SSF56235 1 222 5.92E-42 T 22-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal SRM_RS01985 2d8cde598c663d84f7ff043181d79db4 632 PANTHER PTHR11772:SF10 3 389 1.0E-42 T 22-04-2016 SRM_RS01985 2d8cde598c663d84f7ff043181d79db4 632 PANTHER PTHR11772:SF10 490 558 1.0E-42 T 22-04-2016 SRM_RS01985 2d8cde598c663d84f7ff043181d79db4 632 PANTHER PTHR11772 3 389 1.0E-42 T 22-04-2016 SRM_RS01985 2d8cde598c663d84f7ff043181d79db4 632 PANTHER PTHR11772 490 558 1.0E-42 T 22-04-2016 SRM_RS07905 db398e859ca864679bc6877ffdccc18e 847 Pfam PF02687 FtsX-like permease family 260 380 2.6E-17 T 22-04-2016 IPR003838 ABC transporter permease protein domain GO:0016020 SRM_RS07905 db398e859ca864679bc6877ffdccc18e 847 Pfam PF02687 FtsX-like permease family 723 840 1.7E-19 T 22-04-2016 IPR003838 ABC transporter permease protein domain GO:0016020 SRM_RS07905 db398e859ca864679bc6877ffdccc18e 847 PANTHER PTHR30489:SF6 1 185 6.1E-239 T 22-04-2016 SRM_RS07905 db398e859ca864679bc6877ffdccc18e 847 PANTHER PTHR30489:SF6 231 847 6.1E-239 T 22-04-2016 SRM_RS07905 db398e859ca864679bc6877ffdccc18e 847 PANTHER PTHR30489 1 185 6.1E-239 T 22-04-2016 SRM_RS07905 db398e859ca864679bc6877ffdccc18e 847 PANTHER PTHR30489 231 847 6.1E-239 T 22-04-2016 SRM_RS07905 db398e859ca864679bc6877ffdccc18e 847 Pfam PF12704 MacB-like periplasmic core domain 481 686 8.1E-12 T 22-04-2016 IPR025857 MacB-like periplasmic core domain SRM_RS07905 db398e859ca864679bc6877ffdccc18e 847 Pfam PF12704 MacB-like periplasmic core domain 21 196 6.8E-8 T 22-04-2016 IPR025857 MacB-like periplasmic core domain SRM_RS07865 1fcda2b35035d325fac167437ec9952e 178 SUPERFAMILY SSF159006 2 116 1.44E-15 T 22-04-2016 SRM_RS07865 1fcda2b35035d325fac167437ec9952e 178 Pfam PF09643 YopX protein 1 118 3.6E-22 T 22-04-2016 IPR019096 YopX protein SRM_RS07865 1fcda2b35035d325fac167437ec9952e 178 Gene3D G3DSA:2.30.30.290 49 141 4.3E-16 T 22-04-2016 IPR023385 YopX-like domain, beta barrel type SRM_RS06550 e89ab21e4eda1b46278d063188139805 184 PANTHER PTHR11655:SF14 1 182 8.6E-77 T 22-04-2016 SRM_RS06550 e89ab21e4eda1b46278d063188139805 184 Hamap MF_01365_B 50S ribosomal protein L6 [rplF]. 1 181 34.866 T 22-04-2016 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 SRM_RS06550 e89ab21e4eda1b46278d063188139805 184 Gene3D G3DSA:3.90.930.12 84 182 7.5E-35 T 22-04-2016 IPR020040 Ribosomal protein L6, alpha-beta domain GO:0003735|GO:0005840|GO:0006412|GO:0019843 SRM_RS06550 e89ab21e4eda1b46278d063188139805 184 SUPERFAMILY SSF56053 1 83 6.72E-20 T 22-04-2016 IPR020040 Ribosomal protein L6, alpha-beta domain GO:0003735|GO:0005840|GO:0006412|GO:0019843 SRM_RS06550 e89ab21e4eda1b46278d063188139805 184 SUPERFAMILY SSF56053 84 181 1.32E-32 T 22-04-2016 IPR020040 Ribosomal protein L6, alpha-beta domain GO:0003735|GO:0005840|GO:0006412|GO:0019843 SRM_RS06550 e89ab21e4eda1b46278d063188139805 184 Pfam PF00347 Ribosomal protein L6 91 169 7.7E-18 T 22-04-2016 IPR020040 Ribosomal protein L6, alpha-beta domain GO:0003735|GO:0005840|GO:0006412|GO:0019843 SRM_RS06550 e89ab21e4eda1b46278d063188139805 184 Pfam PF00347 Ribosomal protein L6 11 83 1.4E-16 T 22-04-2016 IPR020040 Ribosomal protein L6, alpha-beta domain GO:0003735|GO:0005840|GO:0006412|GO:0019843 SRM_RS06550 e89ab21e4eda1b46278d063188139805 184 TIGRFAM TIGR03654 L6_bact: ribosomal protein uL6 3 181 1.0E-67 T 22-04-2016 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 SRM_RS06550 e89ab21e4eda1b46278d063188139805 184 Gene3D G3DSA:3.90.930.12 3 83 4.6E-26 T 22-04-2016 IPR020040 Ribosomal protein L6, alpha-beta domain GO:0003735|GO:0005840|GO:0006412|GO:0019843 SRM_RS06550 e89ab21e4eda1b46278d063188139805 184 ProSitePatterns PS00525 Ribosomal protein L6 signature 1. 159 167 - T 22-04-2016 IPR002358 Ribosomal protein L6, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 SRM_RS06550 e89ab21e4eda1b46278d063188139805 184 PIRSF PIRSF002162 1 182 1.7E-47 T 22-04-2016 IPR000702 Ribosomal protein L6 GO:0003735|GO:0005840|GO:0006412|GO:0019843 SRM_RS06550 e89ab21e4eda1b46278d063188139805 184 PRINTS PR00059 Ribosomal protein L6 signature 146 167 1.5E-25 T 22-04-2016 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 SRM_RS06550 e89ab21e4eda1b46278d063188139805 184 PRINTS PR00059 Ribosomal protein L6 signature 72 97 1.5E-25 T 22-04-2016 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 SRM_RS06550 e89ab21e4eda1b46278d063188139805 184 PANTHER PTHR11655 1 182 8.6E-77 T 22-04-2016 IPR000702 Ribosomal protein L6 GO:0003735|GO:0005840|GO:0006412|GO:0019843 SRM_RS05050 383863a96c709957b17c6d08778b708b 285 PANTHER PTHR13696 1 258 9.1E-49 T 22-04-2016 SRM_RS05050 383863a96c709957b17c6d08778b708b 285 PANTHER PTHR13696:SF52 1 258 9.1E-49 T 22-04-2016 SRM_RS05050 383863a96c709957b17c6d08778b708b 285 SUPERFAMILY SSF52540 1 251 3.95E-47 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SRM_RS05050 383863a96c709957b17c6d08778b708b 285 Gene3D G3DSA:3.40.50.300 1 255 8.8E-50 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SRM_RS05050 383863a96c709957b17c6d08778b708b 285 Pfam PF13614 AAA domain 1 174 1.4E-33 T 22-04-2016 IPR025669 AAA domain SRM_RS07715 4fea38e51b4c0364236177be92c6ec30 198 PANTHER PTHR12213 4 183 3.4E-77 T 22-04-2016 SRM_RS07715 4fea38e51b4c0364236177be92c6ec30 198 Gene3D G3DSA:1.20.1200.10 14 186 1.0E-64 T 22-04-2016 IPR016030 Adenosylcobalamin biosynthesis, ATP:cob(I)alamin adenosyltransferase-like KEGG: 00860+2.5.1.17|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6268|MetaCyc: PWY-6269 SRM_RS07715 4fea38e51b4c0364236177be92c6ec30 198 SUPERFAMILY SSF89028 4 184 2.16E-61 T 22-04-2016 IPR016030 Adenosylcobalamin biosynthesis, ATP:cob(I)alamin adenosyltransferase-like KEGG: 00860+2.5.1.17|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6268|MetaCyc: PWY-6269 SRM_RS07715 4fea38e51b4c0364236177be92c6ec30 198 Pfam PF01923 Cobalamin adenosyltransferase 5 172 4.5E-61 T 22-04-2016 IPR016030 Adenosylcobalamin biosynthesis, ATP:cob(I)alamin adenosyltransferase-like KEGG: 00860+2.5.1.17|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6268|MetaCyc: PWY-6269 SRM_RS07715 4fea38e51b4c0364236177be92c6ec30 198 TIGRFAM TIGR00636 PduO_Nterm: ATP:cob(I)alamin adenosyltransferase 6 183 1.2E-61 T 22-04-2016 IPR029499 ATP:cob(I)alamin adenosyltransferase, PduO-type KEGG: 00860+2.5.1.17|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6268|MetaCyc: PWY-6269|UniPathway: UPA00148 SRM_RS07715 4fea38e51b4c0364236177be92c6ec30 198 ProDom PD007457 TRANSFERASE ADENOSYLTRANSFERASE COBALAMIN ATP:COBIALAMIN ADENOSYLTRANSFERASE PDUO TYPE RELATED ACIDURIA YVQK 11 183 5.0E-39 T 22-04-2016 IPR029499 ATP:cob(I)alamin adenosyltransferase, PduO-type KEGG: 00860+2.5.1.17|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6268|MetaCyc: PWY-6269|UniPathway: UPA00148 SRM_RS03035 da49d64cffb955029b6ef452282cd98d 454 PANTHER PTHR18968 113 432 1.6E-110 T 22-04-2016 SRM_RS03035 da49d64cffb955029b6ef452282cd98d 454 PANTHER PTHR18968:SF89 113 432 1.6E-110 T 22-04-2016 SRM_RS03035 da49d64cffb955029b6ef452282cd98d 454 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 158 304 1.3E-28 T 22-04-2016 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 SRM_RS03035 da49d64cffb955029b6ef452282cd98d 454 Gene3D G3DSA:3.40.50.970 402 429 4.5E-83 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold SRM_RS03035 da49d64cffb955029b6ef452282cd98d 454 Gene3D G3DSA:3.40.50.970 123 345 4.5E-83 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold SRM_RS03035 da49d64cffb955029b6ef452282cd98d 454 SUPERFAMILY SSF52518 91 454 7.16E-84 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold SRM_RS09035 f8e94b2031d70d7e09facac259581f4a 243 TIGRFAM TIGR01704 MTA/SAH-Nsdase: MTA/SAH nucleosidase 7 229 8.0E-45 T 22-04-2016 IPR010049 MTA/SAH nucleosidase GO:0008782|GO:0008930|GO:0009164|GO:0019509 KEGG: 00270+3.2.2.9|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154|UniPathway: UPA00904 SRM_RS09035 f8e94b2031d70d7e09facac259581f4a 243 Pfam PF01048 Phosphorylase superfamily 7 229 1.0E-47 T 22-04-2016 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 SRM_RS09035 f8e94b2031d70d7e09facac259581f4a 243 PANTHER PTHR21234 5 229 3.8E-42 T 22-04-2016 IPR018017 Nucleoside phosphorylase SRM_RS09035 f8e94b2031d70d7e09facac259581f4a 243 Gene3D G3DSA:3.40.50.1580 5 232 1.3E-68 T 22-04-2016 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 SRM_RS09035 f8e94b2031d70d7e09facac259581f4a 243 SUPERFAMILY SSF53167 5 229 1.22E-59 T 22-04-2016 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 SRM_RS03025 78a05f3a068b4964c4cdf638d4b0fc6f 252 Hamap MF_00063 Phosphoadenosine phosphosulfate reductase [cysH]. 5 239 35.543 T 22-04-2016 IPR004511 Phosphoadenosine phosphosulphate/adenosine 5'-phosphosulphate reductase GO:0004604|GO:0019379|GO:0055114 KEGG: 00920+1.8.4.8|UniPathway: UPA00140 SRM_RS03025 78a05f3a068b4964c4cdf638d4b0fc6f 252 Pfam PF01507 Phosphoadenosine phosphosulfate reductase family 49 214 2.0E-41 T 22-04-2016 IPR002500 Phosphoadenosine phosphosulphate reductase GO:0003824|GO:0008152 SRM_RS03025 78a05f3a068b4964c4cdf638d4b0fc6f 252 SUPERFAMILY SSF52402 18 202 2.13E-48 T 22-04-2016 SRM_RS03025 78a05f3a068b4964c4cdf638d4b0fc6f 252 TIGRFAM TIGR00434 cysH: phosophoadenylyl-sulfate reductase 30 238 4.8E-67 T 22-04-2016 IPR004511 Phosphoadenosine phosphosulphate/adenosine 5'-phosphosulphate reductase GO:0004604|GO:0019379|GO:0055114 KEGG: 00920+1.8.4.8|UniPathway: UPA00140 SRM_RS03025 78a05f3a068b4964c4cdf638d4b0fc6f 252 PIRSF PIRSF000857 2 244 7.8E-90 T 22-04-2016 IPR004511 Phosphoadenosine phosphosulphate/adenosine 5'-phosphosulphate reductase GO:0004604|GO:0019379|GO:0055114 KEGG: 00920+1.8.4.8|UniPathway: UPA00140 SRM_RS03025 78a05f3a068b4964c4cdf638d4b0fc6f 252 PANTHER PTHR23293:SF5 17 238 9.9E-76 T 22-04-2016 SRM_RS03025 78a05f3a068b4964c4cdf638d4b0fc6f 252 Gene3D G3DSA:3.40.50.620 12 210 6.6E-57 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold SRM_RS03025 78a05f3a068b4964c4cdf638d4b0fc6f 252 PANTHER PTHR23293 17 238 9.9E-76 T 22-04-2016 SRM_RS07675 be5754aa26e7cf510168a6f811d92124 692 PANTHER PTHR30330 567 680 2.8E-152 T 22-04-2016 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 SRM_RS07675 be5754aa26e7cf510168a6f811d92124 692 PRINTS PR00175 Sodium/alanine symporter signature 343 362 2.7E-46 T 22-04-2016 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 SRM_RS07675 be5754aa26e7cf510168a6f811d92124 692 PRINTS PR00175 Sodium/alanine symporter signature 590 612 2.7E-46 T 22-04-2016 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 SRM_RS07675 be5754aa26e7cf510168a6f811d92124 692 PRINTS PR00175 Sodium/alanine symporter signature 209 231 2.7E-46 T 22-04-2016 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 SRM_RS07675 be5754aa26e7cf510168a6f811d92124 692 PRINTS PR00175 Sodium/alanine symporter signature 438 456 2.7E-46 T 22-04-2016 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 SRM_RS07675 be5754aa26e7cf510168a6f811d92124 692 PRINTS PR00175 Sodium/alanine symporter signature 315 333 2.7E-46 T 22-04-2016 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 SRM_RS07675 be5754aa26e7cf510168a6f811d92124 692 PRINTS PR00175 Sodium/alanine symporter signature 649 669 2.7E-46 T 22-04-2016 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 SRM_RS07675 be5754aa26e7cf510168a6f811d92124 692 PANTHER PTHR30330:SF3 567 680 2.8E-152 T 22-04-2016 SRM_RS07675 be5754aa26e7cf510168a6f811d92124 692 TIGRFAM TIGR00835 agcS: amino acid carrier protein 137 680 2.1E-142 T 22-04-2016 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 SRM_RS07675 be5754aa26e7cf510168a6f811d92124 692 PANTHER PTHR30330 109 463 2.8E-152 T 22-04-2016 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 SRM_RS07675 be5754aa26e7cf510168a6f811d92124 692 PANTHER PTHR30330:SF3 109 463 2.8E-152 T 22-04-2016 SRM_RS07675 be5754aa26e7cf510168a6f811d92124 692 Pfam PF01235 Sodium:alanine symporter family 175 683 2.7E-130 T 22-04-2016 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 SRM_RS03285 adb755a8be384c6223261d9ce061896b 416 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 50 299 1.7E-32 T 22-04-2016 IPR006143 RND efflux pump, membrane fusion protein GO:0016020|GO:0055085 SRM_RS03285 adb755a8be384c6223261d9ce061896b 416 Gene3D G3DSA:2.40.50.100 191 222 1.5E-8 T 22-04-2016 SRM_RS03285 adb755a8be384c6223261d9ce061896b 416 Gene3D G3DSA:2.40.50.100 71 105 1.5E-8 T 22-04-2016 SRM_RS03285 adb755a8be384c6223261d9ce061896b 416 SUPERFAMILY SSF111369 60 300 3.53E-23 T 22-04-2016 SRM_RS03285 adb755a8be384c6223261d9ce061896b 416 PANTHER PTHR30469 322 416 1.7E-32 T 22-04-2016 SRM_RS03285 adb755a8be384c6223261d9ce061896b 416 PANTHER PTHR30469 1 299 1.7E-32 T 22-04-2016 SRM_RS03285 adb755a8be384c6223261d9ce061896b 416 Pfam PF13437 HlyD family secretion protein 194 307 1.9E-13 T 22-04-2016 SRM_RS15400 1f654fdb0c1cb22a2d47ce6f7b57cf8f 229 Gene3D G3DSA:1.10.10.10 128 216 1.0E-18 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SRM_RS15400 1f654fdb0c1cb22a2d47ce6f7b57cf8f 229 Pfam PF00196 Bacterial regulatory proteins, luxR family 159 206 1.3E-12 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 SRM_RS15400 1f654fdb0c1cb22a2d47ce6f7b57cf8f 229 SMART SM00421 157 214 1.0E-13 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 SRM_RS15400 1f654fdb0c1cb22a2d47ce6f7b57cf8f 229 SUPERFAMILY SSF52172 9 140 2.99E-25 T 22-04-2016 IPR011006 CheY-like superfamily SRM_RS15400 1f654fdb0c1cb22a2d47ce6f7b57cf8f 229 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 160 174 1.7E-8 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 SRM_RS15400 1f654fdb0c1cb22a2d47ce6f7b57cf8f 229 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 190 202 1.7E-8 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 SRM_RS15400 1f654fdb0c1cb22a2d47ce6f7b57cf8f 229 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 174 190 1.7E-8 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 SRM_RS15400 1f654fdb0c1cb22a2d47ce6f7b57cf8f 229 SMART SM00448 10 123 3.8E-19 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SRM_RS15400 1f654fdb0c1cb22a2d47ce6f7b57cf8f 229 ProSitePatterns PS00622 LuxR-type HTH domain signature. 174 201 - T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 SRM_RS15400 1f654fdb0c1cb22a2d47ce6f7b57cf8f 229 Gene3D G3DSA:3.40.50.2300 9 127 5.5E-27 T 22-04-2016 SRM_RS15400 1f654fdb0c1cb22a2d47ce6f7b57cf8f 229 PANTHER PTHR26402 10 203 9.1E-46 T 22-04-2016 SRM_RS15400 1f654fdb0c1cb22a2d47ce6f7b57cf8f 229 PANTHER PTHR26402:SF151 10 203 9.1E-46 T 22-04-2016 SRM_RS15400 1f654fdb0c1cb22a2d47ce6f7b57cf8f 229 SUPERFAMILY SSF46894 152 216 1.05E-15 T 22-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 SRM_RS15400 1f654fdb0c1cb22a2d47ce6f7b57cf8f 229 Pfam PF00072 Response regulator receiver domain 12 123 1.4E-22 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SRM_RS02450 82531e3454a68215ef2583a003537194 1072 Pfam PF04450 Peptidase of plants and bacteria 144 273 6.0E-7 T 22-04-2016 IPR007541 Uncharacterised protein family, basic secretory protein SRM_RS02450 82531e3454a68215ef2583a003537194 1072 Gene3D G3DSA:2.130.10.10 311 573 1.5E-52 T 22-04-2016 IPR015943 WD40/YVTN repeat-like-containing domain GO:0005515 SRM_RS02450 82531e3454a68215ef2583a003537194 1072 PANTHER PTHR11731 306 548 3.5E-22 T 22-04-2016 SRM_RS02450 82531e3454a68215ef2583a003537194 1072 Pfam PF00930 Dipeptidyl peptidase IV (DPP IV) N-terminal region 311 549 3.3E-8 T 22-04-2016 IPR002469 Dipeptidylpeptidase IV, N-terminal domain GO:0006508 SRM_RS02450 82531e3454a68215ef2583a003537194 1072 SUPERFAMILY SSF82171 296 562 6.67E-45 T 22-04-2016 SRM_RS01250 f579178a44ca7d68d58f156b82719911 339 Gene3D G3DSA:2.120.10.30 146 336 6.0E-10 T 22-04-2016 IPR011042 Six-bladed beta-propeller, TolB-like SRM_RS01250 f579178a44ca7d68d58f156b82719911 339 Gene3D G3DSA:2.120.10.60 91 145 4.1E-8 T 22-04-2016 SRM_RS01250 f579178a44ca7d68d58f156b82719911 339 Pfam PF07676 WD40-like Beta Propeller Repeat 97 132 1.7E-4 T 22-04-2016 IPR011659 WD40-like Beta Propeller SRM_RS01250 f579178a44ca7d68d58f156b82719911 339 SUPERFAMILY SSF82171 94 336 3.92E-14 T 22-04-2016 SRM_RS15605 e84627d3603efeb8d6bf475a91925381 247 SMART SM00448 5 116 5.4E-43 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SRM_RS15605 e84627d3603efeb8d6bf475a91925381 247 Gene3D G3DSA:3.40.50.2300 5 125 7.6E-41 T 22-04-2016 SRM_RS15605 e84627d3603efeb8d6bf475a91925381 247 Pfam PF00072 Response regulator receiver domain 8 117 8.3E-30 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SRM_RS15605 e84627d3603efeb8d6bf475a91925381 247 SMART SM00862 150 225 5.1E-26 T 22-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 SRM_RS15605 e84627d3603efeb8d6bf475a91925381 247 PANTHER PTHR26402:SF578 5 224 2.4E-89 T 22-04-2016 SRM_RS15605 e84627d3603efeb8d6bf475a91925381 247 SUPERFAMILY SSF52172 5 185 1.9E-41 T 22-04-2016 IPR011006 CheY-like superfamily SRM_RS15605 e84627d3603efeb8d6bf475a91925381 247 Gene3D G3DSA:1.10.10.10 128 225 1.0E-31 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SRM_RS15605 e84627d3603efeb8d6bf475a91925381 247 PANTHER PTHR26402 5 224 2.4E-89 T 22-04-2016 SRM_RS15605 e84627d3603efeb8d6bf475a91925381 247 Pfam PF00486 Transcriptional regulatory protein, C terminal 150 224 5.8E-26 T 22-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 SRM_RS01765 3522a9e566da64d3b56c81d08c2ba050 679 Pfam PF01968 Hydantoinase/oxoprolinase 205 490 1.1E-92 T 22-04-2016 IPR002821 Hydantoinase/oxoprolinase GO:0016787 SRM_RS01765 3522a9e566da64d3b56c81d08c2ba050 679 Pfam PF05378 Hydantoinase/oxoprolinase N-terminal region 15 183 6.8E-50 T 22-04-2016 IPR008040 Hydantoinaseoxoprolinase, N-terminal SRM_RS01765 3522a9e566da64d3b56c81d08c2ba050 679 PANTHER PTHR11365 7 679 2.8E-213 T 22-04-2016 SRM_RS15675 3732429d14e758a96165653fefb28908 374 Gene3D G3DSA:2.60.40.670 36 128 6.3E-14 T 22-04-2016 IPR000601 PKD domain SRM_RS15675 3732429d14e758a96165653fefb28908 374 Pfam PF00801 PKD domain 44 117 2.0E-6 T 22-04-2016 IPR000601 PKD domain SRM_RS15675 3732429d14e758a96165653fefb28908 374 Pfam PF00722 Glycosyl hydrolases family 16 167 369 3.4E-34 T 22-04-2016 IPR000757 Glycoside hydrolase family 16 GO:0004553|GO:0005975 SRM_RS15675 3732429d14e758a96165653fefb28908 374 SMART SM00089 39 129 2.5E-15 T 22-04-2016 IPR022409 PKD/Chitinase domain SRM_RS15675 3732429d14e758a96165653fefb28908 374 PANTHER PTHR10963 135 371 1.1E-55 T 22-04-2016 SRM_RS15675 3732429d14e758a96165653fefb28908 374 Gene3D G3DSA:2.60.120.200 132 372 1.1E-77 T 22-04-2016 IPR013320 Concanavalin A-like lectin/glucanase domain SRM_RS15675 3732429d14e758a96165653fefb28908 374 SUPERFAMILY SSF49299 35 128 9.55E-14 T 22-04-2016 IPR000601 PKD domain SRM_RS15675 3732429d14e758a96165653fefb28908 374 SUPERFAMILY SSF49899 127 373 3.85E-74 T 22-04-2016 IPR013320 Concanavalin A-like lectin/glucanase domain SRM_RS12395 9b3fd019437eacd8d39812b9941091ea 472 PANTHER PTHR11911:SF23 140 450 1.5E-40 T 22-04-2016 SRM_RS12395 9b3fd019437eacd8d39812b9941091ea 472 Pfam PF03448 MgtE intracellular N domain 57 155 8.8E-22 T 22-04-2016 IPR006668 Magnesium transporter, MgtE intracellular domain SRM_RS12395 9b3fd019437eacd8d39812b9941091ea 472 Pfam PF01769 Divalent cation transporter 341 466 2.9E-21 T 22-04-2016 IPR006667 SLC41 divalent cation transporters, integral membrane domain GO:0006812|GO:0008324 SRM_RS12395 9b3fd019437eacd8d39812b9941091ea 472 Gene3D G3DSA:1.25.60.10 29 150 1.6E-24 T 22-04-2016 SRM_RS12395 9b3fd019437eacd8d39812b9941091ea 472 PANTHER PTHR11911 140 450 1.5E-40 T 22-04-2016 SRM_RS12395 9b3fd019437eacd8d39812b9941091ea 472 SUPERFAMILY SSF158791 31 154 1.83E-24 T 22-04-2016 SRM_RS12395 9b3fd019437eacd8d39812b9941091ea 472 SUPERFAMILY SSF161093 298 471 1.83E-42 T 22-04-2016 SRM_RS12395 9b3fd019437eacd8d39812b9941091ea 472 Gene3D G3DSA:3.10.580.10 151 282 1.1E-22 T 22-04-2016 SRM_RS12395 9b3fd019437eacd8d39812b9941091ea 472 SMART SM00116 228 276 0.15 T 22-04-2016 IPR000644 CBS domain SRM_RS12395 9b3fd019437eacd8d39812b9941091ea 472 SMART SM00116 164 217 17.0 T 22-04-2016 IPR000644 CBS domain SRM_RS12395 9b3fd019437eacd8d39812b9941091ea 472 TIGRFAM TIGR00400 mgtE: magnesium transporter 28 470 9.3E-105 T 22-04-2016 IPR006669 Magnesium transporter MgtE GO:0015095|GO:0015693|GO:0016020 SRM_RS12395 9b3fd019437eacd8d39812b9941091ea 472 Pfam PF00571 CBS domain 158 213 1.2E-5 T 22-04-2016 IPR000644 CBS domain SRM_RS12395 9b3fd019437eacd8d39812b9941091ea 472 Pfam PF00571 CBS domain 221 275 1.4E-4 T 22-04-2016 IPR000644 CBS domain SRM_RS12395 9b3fd019437eacd8d39812b9941091ea 472 SMART SM00924 56 157 3.6E-27 T 22-04-2016 IPR006668 Magnesium transporter, MgtE intracellular domain SRM_RS12395 9b3fd019437eacd8d39812b9941091ea 472 SUPERFAMILY SSF54631 156 294 1.89E-29 T 22-04-2016 SRM_RS12395 9b3fd019437eacd8d39812b9941091ea 472 Gene3D G3DSA:1.10.357.20 298 471 1.3E-43 T 22-04-2016 IPR006667 SLC41 divalent cation transporters, integral membrane domain GO:0006812|GO:0008324 SRM_RS10030 a65ad739c12b922496ad5160a4989a2d 303 SUPERFAMILY SSF52402 4 143 3.1E-31 T 22-04-2016 SRM_RS10030 a65ad739c12b922496ad5160a4989a2d 303 SUPERFAMILY SSF52402 153 290 1.26E-34 T 22-04-2016 SRM_RS10030 a65ad739c12b922496ad5160a4989a2d 303 Gene3D G3DSA:3.40.50.620 149 290 1.5E-34 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold SRM_RS10030 a65ad739c12b922496ad5160a4989a2d 303 PANTHER PTHR31964 137 290 2.2E-26 T 22-04-2016 SRM_RS10030 a65ad739c12b922496ad5160a4989a2d 303 PRINTS PR01438 Universal stress protein signature 119 141 6.7E-17 T 22-04-2016 IPR006015 Universal stress protein A SRM_RS10030 a65ad739c12b922496ad5160a4989a2d 303 PRINTS PR01438 Universal stress protein signature 4 22 6.7E-17 T 22-04-2016 IPR006015 Universal stress protein A SRM_RS10030 a65ad739c12b922496ad5160a4989a2d 303 PRINTS PR01438 Universal stress protein signature 101 113 6.7E-17 T 22-04-2016 IPR006015 Universal stress protein A SRM_RS10030 a65ad739c12b922496ad5160a4989a2d 303 Gene3D G3DSA:3.40.50.620 3 141 1.6E-31 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold SRM_RS10030 a65ad739c12b922496ad5160a4989a2d 303 Pfam PF00582 Universal stress protein family 4 141 3.6E-28 T 22-04-2016 IPR006016 UspA GO:0006950 SRM_RS10030 a65ad739c12b922496ad5160a4989a2d 303 Pfam PF00582 Universal stress protein family 153 290 2.4E-31 T 22-04-2016 IPR006016 UspA GO:0006950 SRM_RS06910 5abd9a6f0e46ddbe869f4d5596bac259 702 Gene3D G3DSA:3.60.20.10 164 262 9.0E-88 T 22-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal SRM_RS06910 5abd9a6f0e46ddbe869f4d5596bac259 702 Gene3D G3DSA:3.60.20.10 335 535 9.0E-88 T 22-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal SRM_RS06910 5abd9a6f0e46ddbe869f4d5596bac259 702 PANTHER PTHR34218 36 700 9.2E-119 T 22-04-2016 SRM_RS06910 5abd9a6f0e46ddbe869f4d5596bac259 702 Gene3D G3DSA:2.30.120.10 263 324 7.7E-24 T 22-04-2016 SRM_RS06910 5abd9a6f0e46ddbe869f4d5596bac259 702 PANTHER PTHR34218:SF3 36 700 9.2E-119 T 22-04-2016 SRM_RS06910 5abd9a6f0e46ddbe869f4d5596bac259 702 Pfam PF01804 Penicillin amidase 37 693 8.3E-134 T 22-04-2016 IPR002692 Penicillin/cephalosporin acylase GO:0016787|GO:0017000 SRM_RS06910 5abd9a6f0e46ddbe869f4d5596bac259 702 Gene3D G3DSA:1.10.439.10 32 163 4.8E-32 T 22-04-2016 IPR023343 Penicillin amidase type, domain1 GO:0016811 SRM_RS06910 5abd9a6f0e46ddbe869f4d5596bac259 702 SUPERFAMILY SSF56235 33 701 1.23E-178 T 22-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal SRM_RS02550 b9269c28eaf9bb4b35a8a3e7f5e3266d 198 PANTHER PTHR10422 49 158 2.0E-21 T 22-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 SRM_RS02550 b9269c28eaf9bb4b35a8a3e7f5e3266d 198 SUPERFAMILY SSF46626 90 188 1.66E-20 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 SRM_RS02550 b9269c28eaf9bb4b35a8a3e7f5e3266d 198 SUPERFAMILY SSF46626 4 63 1.66E-20 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 SRM_RS02550 b9269c28eaf9bb4b35a8a3e7f5e3266d 198 PANTHER PTHR10422:SF23 49 158 2.0E-21 T 22-04-2016 SRM_RS02550 b9269c28eaf9bb4b35a8a3e7f5e3266d 198 Gene3D G3DSA:1.10.760.10 13 188 2.8E-21 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 SRM_RS02550 b9269c28eaf9bb4b35a8a3e7f5e3266d 198 Pfam PF02433 Cytochrome C oxidase, mono-heme subunit/FixO 9 156 3.5E-35 T 22-04-2016 IPR003468 Cytochrome c oxidase, monohaem subunit/FixO SRM_RS16005 f7f4f7629845a4c51fed9617247174e4 436 Pfam PF13742 OB-fold nucleic acid binding domain 13 105 6.1E-30 T 22-04-2016 IPR025824 OB-fold nucleic acid binding domain GO:0003676 SRM_RS16005 f7f4f7629845a4c51fed9617247174e4 436 Pfam PF02601 Exonuclease VII, large subunit 129 281 3.3E-61 T 22-04-2016 IPR020579 Exonuclease VII, large subunit, C-terminal GO:0008855 SRM_RS16005 f7f4f7629845a4c51fed9617247174e4 436 PANTHER PTHR30008:SF0 5 279 1.8E-119 T 22-04-2016 SRM_RS16005 f7f4f7629845a4c51fed9617247174e4 436 TIGRFAM TIGR00237 xseA: exodeoxyribonuclease VII, large subunit 14 282 1.0E-110 T 22-04-2016 IPR003753 Exonuclease VII, large subunit GO:0006308|GO:0008855|GO:0009318 SRM_RS16005 f7f4f7629845a4c51fed9617247174e4 436 PANTHER PTHR30008 5 279 1.8E-119 T 22-04-2016 SRM_RS16005 f7f4f7629845a4c51fed9617247174e4 436 Hamap MF_00378 Exodeoxyribonuclease 7 large subunit [xseA]. 10 430 22.71 T 22-04-2016 IPR003753 Exonuclease VII, large subunit GO:0006308|GO:0008855|GO:0009318 SRM_RS15155 54528d23a1a3d4d59d79f4472e31c3cd 480 Pfam PF00128 Alpha amylase, catalytic domain 49 360 1.8E-69 T 22-04-2016 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 SRM_RS15155 54528d23a1a3d4d59d79f4472e31c3cd 480 PANTHER PTHR10357:SF10 1 24 2.1E-151 T 22-04-2016 SRM_RS15155 54528d23a1a3d4d59d79f4472e31c3cd 480 PANTHER PTHR10357:SF10 45 437 2.1E-151 T 22-04-2016 SRM_RS15155 54528d23a1a3d4d59d79f4472e31c3cd 480 Gene3D G3DSA:3.20.20.80 3 390 1.3E-114 T 22-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 SRM_RS15155 54528d23a1a3d4d59d79f4472e31c3cd 480 PANTHER PTHR10357 1 24 2.1E-151 T 22-04-2016 IPR015902 Glycoside hydrolase, family 13 GO:0003824 SRM_RS15155 54528d23a1a3d4d59d79f4472e31c3cd 480 PANTHER PTHR10357 45 437 2.1E-151 T 22-04-2016 IPR015902 Glycoside hydrolase, family 13 GO:0003824 SRM_RS15155 54528d23a1a3d4d59d79f4472e31c3cd 480 Gene3D G3DSA:2.60.40.1180 392 477 2.1E-5 T 22-04-2016 IPR013780 Glycosyl hydrolase, all-beta SRM_RS15155 54528d23a1a3d4d59d79f4472e31c3cd 480 SUPERFAMILY SSF51445 297 398 1.64E-105 T 22-04-2016 IPR017853 Glycoside hydrolase superfamily SRM_RS15155 54528d23a1a3d4d59d79f4472e31c3cd 480 SUPERFAMILY SSF51445 3 269 1.64E-105 T 22-04-2016 IPR017853 Glycoside hydrolase superfamily SRM_RS15155 54528d23a1a3d4d59d79f4472e31c3cd 480 SMART SM00642 14 389 1.1E-99 T 22-04-2016 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 SRM_RS15155 54528d23a1a3d4d59d79f4472e31c3cd 480 SUPERFAMILY SSF51011 398 478 2.02E-5 T 22-04-2016 SRM_RS08700 bb034a910aeefe93dacdec48b61a5dfc 260 TIGRFAM TIGR01460 HAD-SF-IIA: HAD hydrolase, family IIA 12 232 1.4E-46 T 22-04-2016 IPR006357 HAD-superfamily hydrolase, subfamily IIA SRM_RS08700 bb034a910aeefe93dacdec48b61a5dfc 260 PANTHER PTHR19288:SF40 1 258 1.0E-132 T 22-04-2016 SRM_RS08700 bb034a910aeefe93dacdec48b61a5dfc 260 Pfam PF13242 HAD-hyrolase-like 183 256 1.3E-18 T 22-04-2016 SRM_RS08700 bb034a910aeefe93dacdec48b61a5dfc 260 SUPERFAMILY SSF56784 10 257 4.27E-64 T 22-04-2016 IPR023214 HAD-like domain SRM_RS08700 bb034a910aeefe93dacdec48b61a5dfc 260 Gene3D G3DSA:3.40.50.1000 183 258 1.8E-38 T 22-04-2016 IPR023214 HAD-like domain SRM_RS08700 bb034a910aeefe93dacdec48b61a5dfc 260 Gene3D G3DSA:3.40.50.1000 8 84 1.8E-38 T 22-04-2016 IPR023214 HAD-like domain SRM_RS08700 bb034a910aeefe93dacdec48b61a5dfc 260 PANTHER PTHR19288 1 258 1.0E-132 T 22-04-2016 SRM_RS08700 bb034a910aeefe93dacdec48b61a5dfc 260 Gene3D G3DSA:3.40.50.10410 89 182 3.3E-33 T 22-04-2016 IPR023215 Nitrophenylphosphatase-like domain SRM_RS08700 bb034a910aeefe93dacdec48b61a5dfc 260 Pfam PF13344 Haloacid dehalogenase-like hydrolase 11 110 4.7E-25 T 22-04-2016 IPR006357 HAD-superfamily hydrolase, subfamily IIA SRM_RS09370 909ccc1165f301de0bbf8b99678631ad 374 PIRSF PIRSF006487 1 374 4.6E-96 T 22-04-2016 IPR028896 Aminomethyltransferase/Dimethylsulfonioproprionate demethylase DmdA KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10 SRM_RS09370 909ccc1165f301de0bbf8b99678631ad 374 Gene3D G3DSA:3.30.1360.120 149 244 9.2E-54 T 22-04-2016 IPR027266 GTP-binding protein TrmE/Glycine cleavage system T protein, domain 1 GO:0005515 SRM_RS09370 909ccc1165f301de0bbf8b99678631ad 374 Gene3D G3DSA:3.30.1360.120 8 59 9.2E-54 T 22-04-2016 IPR027266 GTP-binding protein TrmE/Glycine cleavage system T protein, domain 1 GO:0005515 SRM_RS09370 909ccc1165f301de0bbf8b99678631ad 374 TIGRFAM TIGR00528 gcvT: glycine cleavage system T protein 9 371 2.5E-124 T 22-04-2016 IPR006223 Glycine cleavage system T protein GO:0004047|GO:0006546 KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10 SRM_RS09370 909ccc1165f301de0bbf8b99678631ad 374 Hamap MF_00259 Aminomethyltransferase [gcvT]. 7 373 44.341 T 22-04-2016 IPR022903 Glycine cleavage system T protein, bacteria GO:0004047|GO:0006546 KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10 SRM_RS09370 909ccc1165f301de0bbf8b99678631ad 374 SUPERFAMILY SSF103025 8 288 8.95E-105 T 22-04-2016 SRM_RS09370 909ccc1165f301de0bbf8b99678631ad 374 Gene3D G3DSA:2.40.30.110 290 372 4.5E-20 T 22-04-2016 IPR013977 Glycine cleavage T-protein, C-terminal barrel domain KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10 SRM_RS09370 909ccc1165f301de0bbf8b99678631ad 374 PANTHER PTHR13847:SF5 10 371 2.8E-64 T 22-04-2016 IPR006223 Glycine cleavage system T protein GO:0004047|GO:0006546 KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10 SRM_RS09370 909ccc1165f301de0bbf8b99678631ad 374 Gene3D G3DSA:3.30.70.1400 60 137 2.0E-30 T 22-04-2016 SRM_RS09370 909ccc1165f301de0bbf8b99678631ad 374 Pfam PF01571 Aminomethyltransferase folate-binding domain 13 266 2.2E-97 T 22-04-2016 IPR006222 Glycine cleavage T-protein-like, N-terminal SRM_RS09370 909ccc1165f301de0bbf8b99678631ad 374 SUPERFAMILY SSF101790 281 372 1.42E-20 T 22-04-2016 IPR029043 Glycine cleavage T-protein/YgfZ, C-terminal domain SRM_RS09370 909ccc1165f301de0bbf8b99678631ad 374 Pfam PF08669 Glycine cleavage T-protein C-terminal barrel domain 273 367 5.2E-21 T 22-04-2016 IPR013977 Glycine cleavage T-protein, C-terminal barrel domain KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10 SRM_RS09370 909ccc1165f301de0bbf8b99678631ad 374 PANTHER PTHR13847 10 371 2.8E-64 T 22-04-2016 SRM_RS15685 f20759b596d86644caf6528269356c72 462 TIGRFAM TIGR00879 SP: MFS transporter, sugar porter (SP) family 2 453 2.6E-116 T 22-04-2016 IPR003663 Sugar/inositol transporter GO:0016020|GO:0022891|GO:0055085 Reactome: REACT_15518 SRM_RS15685 f20759b596d86644caf6528269356c72 462 ProSitePatterns PS00216 Sugar transport proteins signature 1. 58 75 - T 22-04-2016 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 SRM_RS15685 f20759b596d86644caf6528269356c72 462 ProSitePatterns PS00217 Sugar transport proteins signature 2. 100 125 - T 22-04-2016 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 SRM_RS15685 f20759b596d86644caf6528269356c72 462 PRINTS PR00171 Sugar transporter signature 382 394 8.9E-27 T 22-04-2016 IPR003663 Sugar/inositol transporter GO:0016020|GO:0022891|GO:0055085 Reactome: REACT_15518 SRM_RS15685 f20759b596d86644caf6528269356c72 462 PRINTS PR00171 Sugar transporter signature 95 114 8.9E-27 T 22-04-2016 IPR003663 Sugar/inositol transporter GO:0016020|GO:0022891|GO:0055085 Reactome: REACT_15518 SRM_RS15685 f20759b596d86644caf6528269356c72 462 PRINTS PR00171 Sugar transporter signature 359 380 8.9E-27 T 22-04-2016 IPR003663 Sugar/inositol transporter GO:0016020|GO:0022891|GO:0055085 Reactome: REACT_15518 SRM_RS15685 f20759b596d86644caf6528269356c72 462 PRINTS PR00171 Sugar transporter signature 262 272 8.9E-27 T 22-04-2016 IPR003663 Sugar/inositol transporter GO:0016020|GO:0022891|GO:0055085 Reactome: REACT_15518 SRM_RS15685 f20759b596d86644caf6528269356c72 462 PRINTS PR00171 Sugar transporter signature 12 22 8.9E-27 T 22-04-2016 IPR003663 Sugar/inositol transporter GO:0016020|GO:0022891|GO:0055085 Reactome: REACT_15518 SRM_RS15685 f20759b596d86644caf6528269356c72 462 PANTHER PTHR23500:SF22 1 456 8.7E-187 T 22-04-2016 SRM_RS15685 f20759b596d86644caf6528269356c72 462 PANTHER PTHR23500 1 456 8.7E-187 T 22-04-2016 SRM_RS15685 f20759b596d86644caf6528269356c72 462 ProSitePatterns PS00216 Sugar transport proteins signature 1. 306 323 - T 22-04-2016 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 SRM_RS15685 f20759b596d86644caf6528269356c72 462 Pfam PF00083 Sugar (and other) transporter 6 456 1.4E-114 T 22-04-2016 IPR005828 Major facilitator, sugar transporter-like GO:0016021|GO:0022857|GO:0055085 SRM_RS15685 f20759b596d86644caf6528269356c72 462 SUPERFAMILY SSF103473 7 204 2.62E-65 T 22-04-2016 IPR020846 Major facilitator superfamily domain SRM_RS15685 f20759b596d86644caf6528269356c72 462 SUPERFAMILY SSF103473 232 457 2.62E-65 T 22-04-2016 IPR020846 Major facilitator superfamily domain SRM_RS15685 f20759b596d86644caf6528269356c72 462 Gene3D G3DSA:1.20.1250.20 250 453 1.9E-22 T 22-04-2016 SRM_RS15685 f20759b596d86644caf6528269356c72 462 Gene3D G3DSA:1.20.1250.20 8 199 9.0E-23 T 22-04-2016 SRM_RS09475 4bb8bf4c9e8e4f7852adda4836c82b79 217 SUPERFAMILY SSF53328 1 196 1.11E-57 T 22-04-2016 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 SRM_RS09475 4bb8bf4c9e8e4f7852adda4836c82b79 217 TIGRFAM TIGR00639 PurN: phosphoribosylglycinamide formyltransferase 1 194 4.1E-57 T 22-04-2016 IPR004607 Phosphoribosylglycinamide formyltransferase GO:0004644|GO:0006189 KEGG: 00230+2.1.2.2|KEGG: 00670+2.1.2.2|MetaCyc: PWY-6121|MetaCyc: PWY-6613|UniPathway: UPA00074 SRM_RS09475 4bb8bf4c9e8e4f7852adda4836c82b79 217 Hamap MF_01930 Phosphoribosylglycinamide formyltransferase [purN]. 2 192 29.844 T 22-04-2016 IPR004607 Phosphoribosylglycinamide formyltransferase GO:0004644|GO:0006189 KEGG: 00230+2.1.2.2|KEGG: 00670+2.1.2.2|MetaCyc: PWY-6121|MetaCyc: PWY-6613|UniPathway: UPA00074 SRM_RS09475 4bb8bf4c9e8e4f7852adda4836c82b79 217 Pfam PF00551 Formyl transferase 1 186 6.9E-49 T 22-04-2016 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 SRM_RS09475 4bb8bf4c9e8e4f7852adda4836c82b79 217 Gene3D G3DSA:3.40.50.170 1 196 3.3E-61 T 22-04-2016 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 SRM_RS09475 4bb8bf4c9e8e4f7852adda4836c82b79 217 ProSitePatterns PS00373 Phosphoribosylglycinamide formyltransferase active site. 138 161 - T 22-04-2016 IPR001555 Phosphoribosylglycinamide formyltransferase, active site KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 SRM_RS09475 4bb8bf4c9e8e4f7852adda4836c82b79 217 PANTHER PTHR10520 1 198 1.7E-86 T 22-04-2016 SRM_RS07055 ba7b0e5a78fe6e2be1f13bd3512c69ec 150 Gene3D G3DSA:3.50.80.10 1 145 7.1E-53 T 22-04-2016 IPR023509 D-Tyr tRNAtyr deacylase-like domain SRM_RS07055 ba7b0e5a78fe6e2be1f13bd3512c69ec 150 PANTHER PTHR10472 3 145 1.6E-64 T 22-04-2016 IPR003732 D-aminoacyl-tRNA deacylase DTD GO:0005737|GO:0016788|GO:0019478 SRM_RS07055 ba7b0e5a78fe6e2be1f13bd3512c69ec 150 Pfam PF02580 D-Tyr-tRNA(Tyr) deacylase 3 145 5.3E-51 T 22-04-2016 IPR003732 D-aminoacyl-tRNA deacylase DTD GO:0005737|GO:0016788|GO:0019478 SRM_RS07055 ba7b0e5a78fe6e2be1f13bd3512c69ec 150 Hamap MF_00518 D-aminoacyl-tRNA deacylase [dtd]. 1 146 33.288 T 22-04-2016 IPR003732 D-aminoacyl-tRNA deacylase DTD GO:0005737|GO:0016788|GO:0019478 SRM_RS07055 ba7b0e5a78fe6e2be1f13bd3512c69ec 150 SUPERFAMILY SSF69500 1 145 9.29E-51 T 22-04-2016 IPR023509 D-Tyr tRNAtyr deacylase-like domain SRM_RS07055 ba7b0e5a78fe6e2be1f13bd3512c69ec 150 TIGRFAM TIGR00256 TIGR00256: D-tyrosyl-tRNA(Tyr) deacylase 1 145 2.6E-50 T 22-04-2016 IPR003732 D-aminoacyl-tRNA deacylase DTD GO:0005737|GO:0016788|GO:0019478 SRM_RS08975 a9308971403f77721429d77a8a321d4d 966 PANTHER PTHR11777 13 418 0.0 T 22-04-2016 SRM_RS08975 a9308971403f77721429d77a8a321d4d 966 PANTHER PTHR11777 468 966 0.0 T 22-04-2016 SRM_RS08975 a9308971403f77721429d77a8a321d4d 966 Pfam PF07973 Threonyl and Alanyl tRNA synthetase second additional domain 736 780 9.4E-15 T 22-04-2016 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0005524|GO:0016876|GO:0043039 SRM_RS08975 a9308971403f77721429d77a8a321d4d 966 SUPERFAMILY SSF101353 273 422 1.07E-60 T 22-04-2016 IPR018162 Alanine-tRNA ligase, class IIc, anti-codon-binding domain GO:0000166|GO:0004813|GO:0005524|GO:0005737|GO:0006419 KEGG: 00970+6.1.1.7|Reactome: REACT_71 SRM_RS08975 a9308971403f77721429d77a8a321d4d 966 SUPERFAMILY SSF101353 469 546 1.07E-60 T 22-04-2016 IPR018162 Alanine-tRNA ligase, class IIc, anti-codon-binding domain GO:0000166|GO:0004813|GO:0005524|GO:0005737|GO:0006419 KEGG: 00970+6.1.1.7|Reactome: REACT_71 SRM_RS08975 a9308971403f77721429d77a8a321d4d 966 Pfam PF02272 DHHA1 domain 892 955 1.8E-8 T 22-04-2016 IPR003156 DHHA1 domain GO:0003676 KEGG: 00970+6.1.1.7 SRM_RS08975 a9308971403f77721429d77a8a321d4d 966 PRINTS PR00980 Alanyl-tRNA synthetase signature 315 331 5.4E-31 T 22-04-2016 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7|Reactome: REACT_71 SRM_RS08975 a9308971403f77721429d77a8a321d4d 966 PRINTS PR00980 Alanyl-tRNA synthetase signature 339 352 5.4E-31 T 22-04-2016 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7|Reactome: REACT_71 SRM_RS08975 a9308971403f77721429d77a8a321d4d 966 PRINTS PR00980 Alanyl-tRNA synthetase signature 253 266 5.4E-31 T 22-04-2016 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7|Reactome: REACT_71 SRM_RS08975 a9308971403f77721429d77a8a321d4d 966 PRINTS PR00980 Alanyl-tRNA synthetase signature 91 102 5.4E-31 T 22-04-2016 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7|Reactome: REACT_71 SRM_RS08975 a9308971403f77721429d77a8a321d4d 966 PRINTS PR00980 Alanyl-tRNA synthetase signature 226 237 5.4E-31 T 22-04-2016 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7|Reactome: REACT_71 SRM_RS08975 a9308971403f77721429d77a8a321d4d 966 Gene3D G3DSA:3.30.930.10 19 268 1.3E-108 T 22-04-2016 SRM_RS08975 a9308971403f77721429d77a8a321d4d 966 SMART SM00863 736 780 1.7E-17 T 22-04-2016 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0005524|GO:0016876|GO:0043039 SRM_RS08975 a9308971403f77721429d77a8a321d4d 966 SUPERFAMILY SSF50447 544 624 3.35E-14 T 22-04-2016 IPR009000 Translation protein, beta-barrel domain SRM_RS08975 a9308971403f77721429d77a8a321d4d 966 Pfam PF01411 tRNA synthetases class II (A) 22 427 4.6E-153 T 22-04-2016 IPR018164 Alanyl-tRNA synthetase, class IIc, N-terminal GO:0000166|GO:0004813|GO:0005524|GO:0006419 KEGG: 00970+6.1.1.7 SRM_RS08975 a9308971403f77721429d77a8a321d4d 966 Pfam PF01411 tRNA synthetases class II (A) 465 622 2.6E-31 T 22-04-2016 IPR018164 Alanyl-tRNA synthetase, class IIc, N-terminal GO:0000166|GO:0004813|GO:0005524|GO:0006419 KEGG: 00970+6.1.1.7 SRM_RS08975 a9308971403f77721429d77a8a321d4d 966 PANTHER PTHR11777:SF9 13 418 0.0 T 22-04-2016 SRM_RS08975 a9308971403f77721429d77a8a321d4d 966 PANTHER PTHR11777:SF9 468 966 0.0 T 22-04-2016 SRM_RS08975 a9308971403f77721429d77a8a321d4d 966 SUPERFAMILY SSF55681 19 272 2.73E-96 T 22-04-2016 SRM_RS08975 a9308971403f77721429d77a8a321d4d 966 Hamap MF_00036_B Alanine--tRNA ligase [alaS]. 1 965 151.087 T 22-04-2016 IPR023033 Alanine-tRNA ligase, eukaryota/bacteria GO:0004813 KEGG: 00970+6.1.1.7 SRM_RS08975 a9308971403f77721429d77a8a321d4d 966 SUPERFAMILY SSF55186 634 792 5.1E-45 T 22-04-2016 IPR018163 Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain GO:0000166 SRM_RS08975 a9308971403f77721429d77a8a321d4d 966 TIGRFAM TIGR00344 alaS: alanine--tRNA ligase 22 419 1.3E-147 T 22-04-2016 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7|Reactome: REACT_71 SRM_RS09055 358aa728deeb0fb7ee8589d86fbacf4b 272 TIGRFAM TIGR00112 proC: pyrroline-5-carboxylate reductase 7 269 1.8E-82 T 22-04-2016 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|UniPathway: UPA00098 SRM_RS09055 358aa728deeb0fb7ee8589d86fbacf4b 272 PANTHER PTHR11645 1 272 3.4E-110 T 22-04-2016 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|UniPathway: UPA00098 SRM_RS09055 358aa728deeb0fb7ee8589d86fbacf4b 272 PANTHER PTHR11645:SF0 1 272 3.4E-110 T 22-04-2016 SRM_RS09055 358aa728deeb0fb7ee8589d86fbacf4b 272 SUPERFAMILY SSF48179 164 271 3.74E-37 T 22-04-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 SRM_RS09055 358aa728deeb0fb7ee8589d86fbacf4b 272 Gene3D G3DSA:1.10.3730.10 164 269 3.5E-42 T 22-04-2016 IPR029036 Pyrroline-5-carboxylate reductase, dimerisation domain KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|UniPathway: UPA00098 SRM_RS09055 358aa728deeb0fb7ee8589d86fbacf4b 272 PIRSF PIRSF000193 4 272 9.1E-81 T 22-04-2016 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|UniPathway: UPA00098 SRM_RS09055 358aa728deeb0fb7ee8589d86fbacf4b 272 Pfam PF03807 NADP oxidoreductase coenzyme F420-dependent 6 102 2.0E-17 T 22-04-2016 IPR028939 Pyrroline-5-carboxylate reductase, catalytic, N-terminal SRM_RS09055 358aa728deeb0fb7ee8589d86fbacf4b 272 Gene3D G3DSA:3.40.50.720 3 163 7.0E-44 T 22-04-2016 IPR016040 NAD(P)-binding domain SRM_RS09055 358aa728deeb0fb7ee8589d86fbacf4b 272 Pfam PF14748 Pyrroline-5-carboxylate reductase dimerisation 165 269 2.5E-39 T 22-04-2016 IPR029036 Pyrroline-5-carboxylate reductase, dimerisation domain KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|UniPathway: UPA00098 SRM_RS09055 358aa728deeb0fb7ee8589d86fbacf4b 272 Hamap MF_01925 Pyrroline-5-carboxylate reductase [proC]. 5 269 26.946 T 22-04-2016 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|UniPathway: UPA00098 SRM_RS09055 358aa728deeb0fb7ee8589d86fbacf4b 272 SUPERFAMILY SSF51735 6 163 5.12E-33 T 22-04-2016 IPR016040 NAD(P)-binding domain SRM_RS08070 7acaef842f2039c068c1374148350da9 612 Pfam PF13522 Glutamine amidotransferase domain 62 194 4.2E-23 T 22-04-2016 SRM_RS08070 7acaef842f2039c068c1374148350da9 612 Hamap MF_00164 Glutamine--fructose-6-phosphate aminotransferase [isomerizing] [glmS]. 1 612 40.363 T 22-04-2016 IPR005855 Glucosamine-fructose-6-phosphate aminotransferase, isomerising GO:0004360|GO:1901137 KEGG: 00250+2.6.1.16|KEGG: 00520+2.6.1.16|MetaCyc: PWY-6749|Reactome: REACT_17015 SRM_RS08070 7acaef842f2039c068c1374148350da9 612 Gene3D G3DSA:3.40.50.10490 446 612 9.7E-64 T 22-04-2016 SRM_RS08070 7acaef842f2039c068c1374148350da9 612 PANTHER PTHR10937:SF0 1 612 0.0 T 22-04-2016 IPR005855 Glucosamine-fructose-6-phosphate aminotransferase, isomerising GO:0004360|GO:1901137 KEGG: 00250+2.6.1.16|KEGG: 00520+2.6.1.16|MetaCyc: PWY-6749|Reactome: REACT_17015 SRM_RS08070 7acaef842f2039c068c1374148350da9 612 SUPERFAMILY SSF53697 247 612 2.97E-116 T 22-04-2016 SRM_RS08070 7acaef842f2039c068c1374148350da9 612 Gene3D G3DSA:3.60.20.10 2 241 3.2E-79 T 22-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal SRM_RS08070 7acaef842f2039c068c1374148350da9 612 TIGRFAM TIGR01135 glmS: glutamine-fructose-6-phosphate transaminase (isomerizing) 2 612 1.5E-248 T 22-04-2016 IPR005855 Glucosamine-fructose-6-phosphate aminotransferase, isomerising GO:0004360|GO:1901137 KEGG: 00250+2.6.1.16|KEGG: 00520+2.6.1.16|MetaCyc: PWY-6749|Reactome: REACT_17015 SRM_RS08070 7acaef842f2039c068c1374148350da9 612 Gene3D G3DSA:3.40.50.10490 245 445 1.3E-76 T 22-04-2016 SRM_RS08070 7acaef842f2039c068c1374148350da9 612 Pfam PF01380 SIS domain 293 420 4.6E-34 T 22-04-2016 IPR001347 Sugar isomerase (SIS) GO:0005975|GO:0030246 Reactome: REACT_17015 SRM_RS08070 7acaef842f2039c068c1374148350da9 612 Pfam PF01380 SIS domain 468 594 5.6E-28 T 22-04-2016 IPR001347 Sugar isomerase (SIS) GO:0005975|GO:0030246 Reactome: REACT_17015 SRM_RS08070 7acaef842f2039c068c1374148350da9 612 SUPERFAMILY SSF56235 2 237 1.63E-70 T 22-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal SRM_RS08070 7acaef842f2039c068c1374148350da9 612 PANTHER PTHR10937 1 612 0.0 T 22-04-2016 SRM_RS06970 ee1cf761b16303e94e51e58bb922830b 281 Hamap MF_01395 Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta, chloroplastic [accD]. 1 281 36.047 T 22-04-2016 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 SRM_RS06970 ee1cf761b16303e94e51e58bb922830b 281 PANTHER PTHR22855:SF17 1 281 4.7E-128 T 22-04-2016 SRM_RS06970 ee1cf761b16303e94e51e58bb922830b 281 Gene3D G3DSA:3.90.226.10 18 280 2.7E-67 T 22-04-2016 IPR029045 ClpP/crotonase-like domain SRM_RS06970 ee1cf761b16303e94e51e58bb922830b 281 Pfam PF01039 Carboxyl transferase domain 92 263 5.4E-20 T 22-04-2016 IPR000022 Carboxyl transferase KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 SRM_RS06970 ee1cf761b16303e94e51e58bb922830b 281 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 129 143 3.5E-38 T 22-04-2016 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 SRM_RS06970 ee1cf761b16303e94e51e58bb922830b 281 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 229 240 3.5E-38 T 22-04-2016 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 SRM_RS06970 ee1cf761b16303e94e51e58bb922830b 281 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 251 260 3.5E-38 T 22-04-2016 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 SRM_RS06970 ee1cf761b16303e94e51e58bb922830b 281 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 163 181 3.5E-38 T 22-04-2016 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 SRM_RS06970 ee1cf761b16303e94e51e58bb922830b 281 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 200 217 3.5E-38 T 22-04-2016 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 SRM_RS06970 ee1cf761b16303e94e51e58bb922830b 281 SUPERFAMILY SSF52096 26 280 2.12E-77 T 22-04-2016 IPR029045 ClpP/crotonase-like domain SRM_RS06970 ee1cf761b16303e94e51e58bb922830b 281 TIGRFAM TIGR00515 accD: acetyl-CoA carboxylase, carboxyl transferase, beta subunit 6 280 7.3E-106 T 22-04-2016 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 SRM_RS06970 ee1cf761b16303e94e51e58bb922830b 281 PANTHER PTHR22855 1 281 4.7E-128 T 22-04-2016 SRM_RS15035 8b538110bb927de7fba8de4d898ad01b 414 SUPERFAMILY SSF56601 78 411 9.16E-64 T 22-04-2016 IPR012338 Beta-lactamase/transpeptidase-like SRM_RS15035 8b538110bb927de7fba8de4d898ad01b 414 PANTHER PTHR22935 19 412 2.6E-48 T 22-04-2016 SRM_RS15035 8b538110bb927de7fba8de4d898ad01b 414 Pfam PF00144 Beta-lactamase 82 396 1.6E-54 T 22-04-2016 IPR001466 Beta-lactamase-related SRM_RS15035 8b538110bb927de7fba8de4d898ad01b 414 Gene3D G3DSA:3.40.710.10 83 409 1.8E-65 T 22-04-2016 IPR012338 Beta-lactamase/transpeptidase-like SRM_RS08365 bd33775ba679af8d2204b91419cf3261 159 ProSitePatterns PS00829 Prokaryotic transcription elongation factors signature 1. 20 51 - T 22-04-2016 IPR018151 Transcription elongation factor, GreA/GreB, conserved site GO:0003677|GO:0032784 SRM_RS08365 bd33775ba679af8d2204b91419cf3261 159 PIRSF PIRSF006092 1 159 3.3E-53 T 22-04-2016 IPR023459 Transcription elongation factor GreA/GreB family GO:0070063 SRM_RS08365 bd33775ba679af8d2204b91419cf3261 159 Pfam PF03449 Transcription elongation factor, N-terminal 7 77 1.2E-29 T 22-04-2016 IPR022691 Transcription elongation factor, GreA/GreB, N-terminal GO:0003677|GO:0032784 SRM_RS08365 bd33775ba679af8d2204b91419cf3261 159 Gene3D G3DSA:1.10.287.180 5 78 9.1E-31 T 22-04-2016 IPR022691 Transcription elongation factor, GreA/GreB, N-terminal GO:0003677|GO:0032784 SRM_RS08365 bd33775ba679af8d2204b91419cf3261 159 SUPERFAMILY SSF54534 84 158 2.35E-17 T 22-04-2016 SRM_RS08365 bd33775ba679af8d2204b91419cf3261 159 ProSitePatterns PS00830 Prokaryotic transcription elongation factors signature 2. 123 139 - T 22-04-2016 IPR018151 Transcription elongation factor, GreA/GreB, conserved site GO:0003677|GO:0032784 SRM_RS08365 bd33775ba679af8d2204b91419cf3261 159 PANTHER PTHR30437 1 157 1.7E-55 T 22-04-2016 SRM_RS08365 bd33775ba679af8d2204b91419cf3261 159 SUPERFAMILY SSF46557 6 81 8.5E-26 T 22-04-2016 IPR022691 Transcription elongation factor, GreA/GreB, N-terminal GO:0003677|GO:0032784 SRM_RS08365 bd33775ba679af8d2204b91419cf3261 159 Hamap MF_00105 Transcription elongation factor GreA [greA]. 5 158 30.556 T 22-04-2016 IPR028624 Transcription elongation factor GreA/GreB GO:0003677|GO:0032784|GO:0070063 SRM_RS08365 bd33775ba679af8d2204b91419cf3261 159 Pfam PF01272 Transcription elongation factor, GreA/GreB, C-term 86 158 1.1E-24 T 22-04-2016 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal GO:0003677|GO:0032784 SRM_RS08365 bd33775ba679af8d2204b91419cf3261 159 TIGRFAM TIGR01462 greA: transcription elongation factor GreA 8 157 2.8E-53 T 22-04-2016 IPR006359 Transcription elongation factor GreA GO:0003677|GO:0032784 SRM_RS08365 bd33775ba679af8d2204b91419cf3261 159 Gene3D G3DSA:3.10.50.30 79 158 5.5E-25 T 22-04-2016 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal GO:0003677|GO:0032784 SRM_RS14795 5dd85871ca554591ecabc14ae961695b 316 Pfam PF13732 Domain of unknown function (DUF4162) 213 299 9.0E-13 T 22-04-2016 IPR025302 Domain of unknown function DUF4162 SRM_RS14795 5dd85871ca554591ecabc14ae961695b 316 Gene3D G3DSA:3.40.50.300 3 226 4.7E-62 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SRM_RS14795 5dd85871ca554591ecabc14ae961695b 316 PANTHER PTHR24220 5 310 1.0E-97 T 22-04-2016 SRM_RS14795 5dd85871ca554591ecabc14ae961695b 316 SUPERFAMILY SSF52540 3 223 9.46E-59 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SRM_RS14795 5dd85871ca554591ecabc14ae961695b 316 Pfam PF00005 ABC transporter 20 159 1.5E-25 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 SRM_RS14795 5dd85871ca554591ecabc14ae961695b 316 ProSitePatterns PS00211 ABC transporters family signature. 132 146 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 SRM_RS14795 5dd85871ca554591ecabc14ae961695b 316 PANTHER PTHR24220:SF450 5 310 1.0E-97 T 22-04-2016 SRM_RS14795 5dd85871ca554591ecabc14ae961695b 316 SMART SM00382 28 215 1.1E-10 T 22-04-2016 IPR003593 AAA+ ATPase domain SRM_RS09720 0513bd631d991a511686796d5899a888 615 ProSitePatterns PS00770 Aminotransferases class-IV signature. 536 565 - T 22-04-2016 IPR018300 Aminotransferase, class IV, conserved site GO:0003824|GO:0008152 Reactome: REACT_13 SRM_RS09720 0513bd631d991a511686796d5899a888 615 PANTHER PTHR11236 126 479 1.0E-133 T 22-04-2016 SRM_RS09720 0513bd631d991a511686796d5899a888 615 PRINTS PR00095 Anthranilate synthase component I signature 321 335 1.5E-9 T 22-04-2016 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661|UniPathway: UPA00035 SRM_RS09720 0513bd631d991a511686796d5899a888 615 PRINTS PR00095 Anthranilate synthase component I signature 227 240 1.5E-9 T 22-04-2016 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661|UniPathway: UPA00035 SRM_RS09720 0513bd631d991a511686796d5899a888 615 PRINTS PR00095 Anthranilate synthase component I signature 241 254 1.5E-9 T 22-04-2016 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661|UniPathway: UPA00035 SRM_RS09720 0513bd631d991a511686796d5899a888 615 PRINTS PR00095 Anthranilate synthase component I signature 336 350 1.5E-9 T 22-04-2016 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661|UniPathway: UPA00035 SRM_RS09720 0513bd631d991a511686796d5899a888 615 SUPERFAMILY SSF56752 335 602 5.23E-51 T 22-04-2016 IPR001544 Aminotransferase class IV GO:0003824|GO:0008152 Reactome: REACT_13 SRM_RS09720 0513bd631d991a511686796d5899a888 615 Gene3D G3DSA:3.60.120.10 37 385 8.9E-118 T 22-04-2016 IPR005801 ADC synthase GO:0009058 SRM_RS09720 0513bd631d991a511686796d5899a888 615 SUPERFAMILY SSF56322 9 383 8.63E-109 T 22-04-2016 IPR005801 ADC synthase GO:0009058 SRM_RS09720 0513bd631d991a511686796d5899a888 615 Pfam PF00425 chorismate binding enzyme 126 379 6.8E-90 T 22-04-2016 IPR015890 Chorismate-utilising enzyme, C-terminal SRM_RS09720 0513bd631d991a511686796d5899a888 615 Gene3D G3DSA:3.20.10.10 488 600 1.9E-32 T 22-04-2016 SRM_RS09720 0513bd631d991a511686796d5899a888 615 Gene3D G3DSA:3.30.470.10 403 463 6.0E-9 T 22-04-2016 SRM_RS09720 0513bd631d991a511686796d5899a888 615 Pfam PF01063 Amino-transferase class IV 403 600 9.5E-47 T 22-04-2016 IPR001544 Aminotransferase class IV GO:0003824|GO:0008152 Reactome: REACT_13 SRM_RS09720 0513bd631d991a511686796d5899a888 615 TIGRFAM TIGR00553 pabB: aminodeoxychorismate synthase, component I 62 382 2.4E-106 T 22-04-2016 IPR005802 Para-aminobenzoate synthase, component I GO:0009396 KEGG: 00790+2.6.1.85|MetaCyc: PWY-6543|UniPathway: UPA00077 SRM_RS09720 0513bd631d991a511686796d5899a888 615 PANTHER PTHR11236:SF18 126 479 1.0E-133 T 22-04-2016 SRM_RS14085 647b344c3183605a824017e0b247befb 577 PANTHER PTHR11552:SF139 12 50 1.3E-73 T 22-04-2016 SRM_RS14085 647b344c3183605a824017e0b247befb 577 PANTHER PTHR11552:SF139 68 576 1.3E-73 T 22-04-2016 SRM_RS14085 647b344c3183605a824017e0b247befb 577 Gene3D G3DSA:3.50.50.60 9 152 6.7E-74 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SRM_RS14085 647b344c3183605a824017e0b247befb 577 Gene3D G3DSA:3.50.50.60 503 571 6.7E-74 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SRM_RS14085 647b344c3183605a824017e0b247befb 577 Gene3D G3DSA:3.50.50.60 219 326 6.7E-74 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SRM_RS14085 647b344c3183605a824017e0b247befb 577 Gene3D G3DSA:3.50.50.60 445 458 6.7E-74 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SRM_RS14085 647b344c3183605a824017e0b247befb 577 SUPERFAMILY SSF54373 307 375 1.69E-15 T 22-04-2016 SRM_RS14085 647b344c3183605a824017e0b247befb 577 SUPERFAMILY SSF54373 421 512 1.69E-15 T 22-04-2016 SRM_RS14085 647b344c3183605a824017e0b247befb 577 Pfam PF05199 GMC oxidoreductase 442 563 8.5E-19 T 22-04-2016 IPR007867 Glucose-methanol-choline oxidoreductase, C-terminal GO:0016614|GO:0055114 SRM_RS14085 647b344c3183605a824017e0b247befb 577 SUPERFAMILY SSF51905 512 573 1.98E-63 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SRM_RS14085 647b344c3183605a824017e0b247befb 577 SUPERFAMILY SSF51905 8 331 1.98E-63 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SRM_RS14085 647b344c3183605a824017e0b247befb 577 Pfam PF00732 GMC oxidoreductase 12 303 6.2E-17 T 22-04-2016 IPR000172 Glucose-methanol-choline oxidoreductase, N-terminal GO:0016614|GO:0050660|GO:0055114 SRM_RS14085 647b344c3183605a824017e0b247befb 577 PANTHER PTHR11552 12 50 1.3E-73 T 22-04-2016 SRM_RS14085 647b344c3183605a824017e0b247befb 577 PANTHER PTHR11552 68 576 1.3E-73 T 22-04-2016 SRM_RS13690 52f8ce503ab6a4521f5074de03baa27d 486 PANTHER PTHR11271 13 289 1.2E-13 T 22-04-2016 SRM_RS13690 52f8ce503ab6a4521f5074de03baa27d 486 SUPERFAMILY SSF51338 419 455 5.23E-9 T 22-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 SRM_RS13690 52f8ce503ab6a4521f5074de03baa27d 486 SUPERFAMILY SSF51338 38 100 5.23E-9 T 22-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 SRM_RS13690 52f8ce503ab6a4521f5074de03baa27d 486 Gene3D G3DSA:2.30.40.10 408 428 3.8E-4 T 22-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 SRM_RS13690 52f8ce503ab6a4521f5074de03baa27d 486 Gene3D G3DSA:2.30.40.10 429 458 1.2E-21 T 22-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 SRM_RS13690 52f8ce503ab6a4521f5074de03baa27d 486 Gene3D G3DSA:2.30.40.10 42 101 1.2E-21 T 22-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 SRM_RS13690 52f8ce503ab6a4521f5074de03baa27d 486 Pfam PF01979 Amidohydrolase family 96 454 3.9E-25 T 22-04-2016 IPR006680 Amidohydrolase-related GO:0016787 SRM_RS13690 52f8ce503ab6a4521f5074de03baa27d 486 Gene3D G3DSA:3.20.20.140 103 407 8.1E-40 T 22-04-2016 SRM_RS13690 52f8ce503ab6a4521f5074de03baa27d 486 PANTHER PTHR11271:SF42 345 482 1.2E-13 T 22-04-2016 SRM_RS13690 52f8ce503ab6a4521f5074de03baa27d 486 SUPERFAMILY SSF51556 99 420 1.86E-42 T 22-04-2016 IPR032466 Metal-dependent hydrolase SRM_RS13690 52f8ce503ab6a4521f5074de03baa27d 486 PANTHER PTHR11271 345 482 1.2E-13 T 22-04-2016 SRM_RS13690 52f8ce503ab6a4521f5074de03baa27d 486 PANTHER PTHR11271:SF42 13 289 1.2E-13 T 22-04-2016 SRM_RS01315 6424d3b47d6c5c7003f40a0a526d36f5 204 SUPERFAMILY SSF56925 19 204 1.15E-10 T 22-04-2016 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 SRM_RS01315 6424d3b47d6c5c7003f40a0a526d36f5 204 Pfam PF13505 Outer membrane protein beta-barrel domain 6 204 1.5E-11 T 22-04-2016 IPR027385 Outer membrane protein beta-barrel SRM_RS01315 6424d3b47d6c5c7003f40a0a526d36f5 204 Gene3D G3DSA:2.40.160.20 20 204 7.3E-6 T 22-04-2016 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 SRM_RS05235 d6e69a83128ebfbdf6310a8e2bad1e72 1160 PRINTS PR00906 SecA protein signature 246 266 4.9E-32 T 22-04-2016 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 SRM_RS05235 d6e69a83128ebfbdf6310a8e2bad1e72 1160 PRINTS PR00906 SecA protein signature 125 149 4.9E-32 T 22-04-2016 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 SRM_RS05235 d6e69a83128ebfbdf6310a8e2bad1e72 1160 PRINTS PR00906 SecA protein signature 192 202 4.9E-32 T 22-04-2016 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 SRM_RS05235 d6e69a83128ebfbdf6310a8e2bad1e72 1160 PRINTS PR00906 SecA protein signature 625 638 4.9E-32 T 22-04-2016 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 SRM_RS05235 d6e69a83128ebfbdf6310a8e2bad1e72 1160 PRINTS PR00906 SecA protein signature 176 190 4.9E-32 T 22-04-2016 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 SRM_RS05235 d6e69a83128ebfbdf6310a8e2bad1e72 1160 Hamap MF_01382 Protein translocase subunit SecA [secA]. 4 1056 19.888 T 22-04-2016 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 SRM_RS05235 d6e69a83128ebfbdf6310a8e2bad1e72 1160 Pfam PF07516 SecA Wing and Scaffold domain 803 1052 9.7E-57 T 22-04-2016 IPR011116 SecA Wing/Scaffold GO:0016020|GO:0017038 SRM_RS05235 d6e69a83128ebfbdf6310a8e2bad1e72 1160 SMART SM00958 458 570 3.7E-21 T 22-04-2016 IPR011130 SecA preprotein, cross-linking domain GO:0016020|GO:0017038 SRM_RS05235 d6e69a83128ebfbdf6310a8e2bad1e72 1160 Pfam PF07517 SecA DEAD-like domain 5 614 1.7E-124 T 22-04-2016 IPR011115 SecA DEAD-like, N-terminal GO:0005524|GO:0016020|GO:0017038 SRM_RS05235 d6e69a83128ebfbdf6310a8e2bad1e72 1160 Pfam PF00271 Helicase conserved C-terminal domain 646 764 2.9E-4 T 22-04-2016 IPR001650 Helicase, C-terminal SRM_RS05235 d6e69a83128ebfbdf6310a8e2bad1e72 1160 Gene3D G3DSA:3.90.1440.10 403 449 1.3E-38 T 22-04-2016 IPR011130 SecA preprotein, cross-linking domain GO:0016020|GO:0017038 SRM_RS05235 d6e69a83128ebfbdf6310a8e2bad1e72 1160 Gene3D G3DSA:3.90.1440.10 512 579 1.3E-38 T 22-04-2016 IPR011130 SecA preprotein, cross-linking domain GO:0016020|GO:0017038 SRM_RS05235 d6e69a83128ebfbdf6310a8e2bad1e72 1160 Pfam PF01043 SecA preprotein cross-linking domain 398 570 7.0E-35 T 22-04-2016 IPR011130 SecA preprotein, cross-linking domain GO:0016020|GO:0017038 SRM_RS05235 d6e69a83128ebfbdf6310a8e2bad1e72 1160 SUPERFAMILY SSF81886 981 1065 2.09E-56 T 22-04-2016 IPR011116 SecA Wing/Scaffold GO:0016020|GO:0017038 SRM_RS05235 d6e69a83128ebfbdf6310a8e2bad1e72 1160 SUPERFAMILY SSF81886 805 933 2.09E-56 T 22-04-2016 IPR011116 SecA Wing/Scaffold GO:0016020|GO:0017038 SRM_RS05235 d6e69a83128ebfbdf6310a8e2bad1e72 1160 SUPERFAMILY SSF52540 3 56 2.75E-70 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SRM_RS05235 d6e69a83128ebfbdf6310a8e2bad1e72 1160 SUPERFAMILY SSF52540 580 627 2.75E-70 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SRM_RS05235 d6e69a83128ebfbdf6310a8e2bad1e72 1160 SUPERFAMILY SSF52540 120 305 2.75E-70 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SRM_RS05235 d6e69a83128ebfbdf6310a8e2bad1e72 1160 SUPERFAMILY SSF81767 489 579 4.05E-26 T 22-04-2016 IPR011130 SecA preprotein, cross-linking domain GO:0016020|GO:0017038 SRM_RS05235 d6e69a83128ebfbdf6310a8e2bad1e72 1160 Gene3D G3DSA:3.40.50.300 122 305 2.9E-111 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SRM_RS05235 d6e69a83128ebfbdf6310a8e2bad1e72 1160 Gene3D G3DSA:3.40.50.300 2 61 2.9E-111 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SRM_RS05235 d6e69a83128ebfbdf6310a8e2bad1e72 1160 Gene3D G3DSA:3.40.50.300 581 627 2.9E-111 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SRM_RS05235 d6e69a83128ebfbdf6310a8e2bad1e72 1160 SUPERFAMILY SSF52540 629 803 4.19E-48 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SRM_RS05235 d6e69a83128ebfbdf6310a8e2bad1e72 1160 PANTHER PTHR30612 1 64 1.8E-283 T 22-04-2016 SRM_RS05235 d6e69a83128ebfbdf6310a8e2bad1e72 1160 PANTHER PTHR30612 127 368 1.8E-283 T 22-04-2016 SRM_RS05235 d6e69a83128ebfbdf6310a8e2bad1e72 1160 PANTHER PTHR30612 497 1127 1.8E-283 T 22-04-2016 SRM_RS05235 d6e69a83128ebfbdf6310a8e2bad1e72 1160 Gene3D G3DSA:1.10.3060.10 833 931 6.3E-46 T 22-04-2016 IPR011116 SecA Wing/Scaffold GO:0016020|GO:0017038 SRM_RS05235 d6e69a83128ebfbdf6310a8e2bad1e72 1160 Gene3D G3DSA:1.10.3060.10 975 1052 6.3E-46 T 22-04-2016 IPR011116 SecA Wing/Scaffold GO:0016020|GO:0017038 SRM_RS05235 d6e69a83128ebfbdf6310a8e2bad1e72 1160 Gene3D G3DSA:3.40.50.300 629 803 8.7E-76 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SRM_RS05235 d6e69a83128ebfbdf6310a8e2bad1e72 1160 SMART SM00957 5 614 1.4E-242 T 22-04-2016 IPR011115 SecA DEAD-like, N-terminal GO:0005524|GO:0016020|GO:0017038 SRM_RS14625 1a2123a89da0b5cfd38d2965c55f70e0 334 SUPERFAMILY SSF109604 18 267 4.13E-44 T 22-04-2016 SRM_RS14625 1a2123a89da0b5cfd38d2965c55f70e0 334 PANTHER PTHR33525:SF3 21 257 4.2E-25 T 22-04-2016 SRM_RS14625 1a2123a89da0b5cfd38d2965c55f70e0 334 Gene3D G3DSA:1.10.3150.10 17 269 8.2E-62 T 22-04-2016 IPR013976 Metal-dependent hydrolase HDOD SRM_RS14625 1a2123a89da0b5cfd38d2965c55f70e0 334 Pfam PF08668 HDOD domain 21 230 7.9E-33 T 22-04-2016 IPR013976 Metal-dependent hydrolase HDOD SRM_RS14625 1a2123a89da0b5cfd38d2965c55f70e0 334 PANTHER PTHR33525 21 257 4.2E-25 T 22-04-2016 SRM_RS05285 ccd2d136c3b74a1a369f1436930ab553 594 PANTHER PTHR10283 299 313 1.1E-148 T 22-04-2016 SRM_RS05285 ccd2d136c3b74a1a369f1436930ab553 594 PANTHER PTHR10283 3 212 1.1E-148 T 22-04-2016 SRM_RS05285 ccd2d136c3b74a1a369f1436930ab553 594 PANTHER PTHR10283 355 592 1.1E-148 T 22-04-2016 SRM_RS05285 ccd2d136c3b74a1a369f1436930ab553 594 Gene3D G3DSA:3.30.70.1450 311 393 2.9E-16 T 22-04-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 SRM_RS05285 ccd2d136c3b74a1a369f1436930ab553 594 SUPERFAMILY SSF116726 303 388 1.7E-14 T 22-04-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 SRM_RS05285 ccd2d136c3b74a1a369f1436930ab553 594 Pfam PF03600 Citrate transporter 12 538 4.3E-56 T 22-04-2016 IPR004680 Citrate transporter-like domain GO:0016021|GO:0055085 SRM_RS05285 ccd2d136c3b74a1a369f1436930ab553 594 SUPERFAMILY SSF116726 212 292 2.62E-12 T 22-04-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 SRM_RS05285 ccd2d136c3b74a1a369f1436930ab553 594 Pfam PF02080 TrkA-C domain 314 382 3.1E-8 T 22-04-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 SRM_RS05285 ccd2d136c3b74a1a369f1436930ab553 594 PANTHER PTHR10283:SF100 299 313 1.1E-148 T 22-04-2016 SRM_RS05285 ccd2d136c3b74a1a369f1436930ab553 594 PANTHER PTHR10283:SF100 3 212 1.1E-148 T 22-04-2016 SRM_RS05285 ccd2d136c3b74a1a369f1436930ab553 594 PANTHER PTHR10283:SF100 355 592 1.1E-148 T 22-04-2016 SRM_RS05285 ccd2d136c3b74a1a369f1436930ab553 594 Gene3D G3DSA:3.30.70.1450 219 288 4.5E-14 T 22-04-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 SRM_RS08085 d1dba0711f23e7c69ff2c8665e9b38c1 70 Pfam PF01084 Ribosomal protein S18 13 62 1.4E-25 T 22-04-2016 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SRM_RS08085 d1dba0711f23e7c69ff2c8665e9b38c1 70 ProSitePatterns PS00057 Ribosomal protein S18 signature. 15 38 - T 22-04-2016 IPR018275 Ribosomal protein S18, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 SRM_RS08085 d1dba0711f23e7c69ff2c8665e9b38c1 70 PRINTS PR00974 Ribosomal protein S18 family signature 32 39 2.1E-17 T 22-04-2016 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SRM_RS08085 d1dba0711f23e7c69ff2c8665e9b38c1 70 PRINTS PR00974 Ribosomal protein S18 family signature 40 54 2.1E-17 T 22-04-2016 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SRM_RS08085 d1dba0711f23e7c69ff2c8665e9b38c1 70 PRINTS PR00974 Ribosomal protein S18 family signature 22 32 2.1E-17 T 22-04-2016 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SRM_RS08085 d1dba0711f23e7c69ff2c8665e9b38c1 70 PRINTS PR00974 Ribosomal protein S18 family signature 54 64 2.1E-17 T 22-04-2016 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SRM_RS08085 d1dba0711f23e7c69ff2c8665e9b38c1 70 SUPERFAMILY SSF46911 8 67 3.79E-25 T 22-04-2016 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SRM_RS08085 d1dba0711f23e7c69ff2c8665e9b38c1 70 TIGRFAM TIGR00165 S18: ribosomal protein bS18 11 66 1.4E-25 T 22-04-2016 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SRM_RS08085 d1dba0711f23e7c69ff2c8665e9b38c1 70 ProDom PD002239 RIBOSOMAL S18 RIBONUCLEOPROTEIN 30S RRNA-BINDING RNA-BINDING CHLOROPLAST PLASTID MITOCHONDRIAL ACETYLATION 14 67 2.0E-16 T 22-04-2016 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SRM_RS08085 d1dba0711f23e7c69ff2c8665e9b38c1 70 Gene3D G3DSA:4.10.640.10 8 68 2.6E-29 T 22-04-2016 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SRM_RS08085 d1dba0711f23e7c69ff2c8665e9b38c1 70 PANTHER PTHR13479 8 65 6.8E-26 T 22-04-2016 SRM_RS08085 d1dba0711f23e7c69ff2c8665e9b38c1 70 Hamap MF_00270 30S ribosomal protein S18 [rpsR]. 6 67 19.449 T 22-04-2016 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SRM_RS14960 089a7e3264db920470d82eb21a228f06 349 Gene3D G3DSA:2.30.30.60 190 238 7.7E-14 T 22-04-2016 SRM_RS14960 089a7e3264db920470d82eb21a228f06 349 SUPERFAMILY SSF82861 87 172 5.62E-13 T 22-04-2016 IPR011014 Mechanosensitive ion channel MscS, transmembrane-2 GO:0016020 SRM_RS14960 089a7e3264db920470d82eb21a228f06 349 PANTHER PTHR30221 87 344 2.9E-56 T 22-04-2016 SRM_RS14960 089a7e3264db920470d82eb21a228f06 349 Gene3D G3DSA:3.30.70.100 244 328 2.5E-19 T 22-04-2016 SRM_RS14960 089a7e3264db920470d82eb21a228f06 349 Pfam PF00924 Mechanosensitive ion channel 135 330 3.1E-46 T 22-04-2016 IPR006685 Mechanosensitive ion channel MscS GO:0016020|GO:0055085 SRM_RS14960 089a7e3264db920470d82eb21a228f06 349 SUPERFAMILY SSF50182 174 238 1.5E-15 T 22-04-2016 IPR010920 LSM domain SRM_RS14960 089a7e3264db920470d82eb21a228f06 349 SUPERFAMILY SSF82689 243 340 5.23E-26 T 22-04-2016 IPR011066 Mechanosensitive ion channel MscS, C-terminal GO:0016020 SRM_RS13665 c012832b4dee63d6af0744172960ed98 625 PANTHER PTHR22953 271 304 1.6E-49 T 22-04-2016 SRM_RS13665 c012832b4dee63d6af0744172960ed98 625 PANTHER PTHR22953 367 401 1.6E-49 T 22-04-2016 SRM_RS13665 c012832b4dee63d6af0744172960ed98 625 PANTHER PTHR22953 3 135 1.6E-49 T 22-04-2016 SRM_RS13665 c012832b4dee63d6af0744172960ed98 625 Pfam PF16655 PhoD-like phosphatase, N-terminal domain 6 76 1.0E-9 T 22-04-2016 IPR032093 Phospholipase D, N-terminal SRM_RS13665 c012832b4dee63d6af0744172960ed98 625 PANTHER PTHR22953:SF28 3 135 1.6E-49 T 22-04-2016 SRM_RS13665 c012832b4dee63d6af0744172960ed98 625 PANTHER PTHR22953:SF28 159 231 1.6E-49 T 22-04-2016 SRM_RS13665 c012832b4dee63d6af0744172960ed98 625 PANTHER PTHR22953:SF28 271 304 1.6E-49 T 22-04-2016 SRM_RS13665 c012832b4dee63d6af0744172960ed98 625 PANTHER PTHR22953:SF28 367 401 1.6E-49 T 22-04-2016 SRM_RS13665 c012832b4dee63d6af0744172960ed98 625 SUPERFAMILY SSF56300 80 237 1.06E-18 T 22-04-2016 IPR029052 Metallo-dependent phosphatase-like SRM_RS13665 c012832b4dee63d6af0744172960ed98 625 SUPERFAMILY SSF56300 278 306 1.06E-18 T 22-04-2016 IPR029052 Metallo-dependent phosphatase-like SRM_RS13665 c012832b4dee63d6af0744172960ed98 625 SUPERFAMILY SSF56300 369 452 1.06E-18 T 22-04-2016 IPR029052 Metallo-dependent phosphatase-like SRM_RS13665 c012832b4dee63d6af0744172960ed98 625 Pfam PF09423 PhoD-like phosphatase 88 483 7.8E-81 T 22-04-2016 IPR018946 Alkaline phosphatase D-related SRM_RS13665 c012832b4dee63d6af0744172960ed98 625 PANTHER PTHR22953 159 231 1.6E-49 T 22-04-2016 SRM_RS13665 c012832b4dee63d6af0744172960ed98 625 Gene3D G3DSA:3.60.21.10 280 312 7.0E-10 T 22-04-2016 IPR029052 Metallo-dependent phosphatase-like SRM_RS13665 c012832b4dee63d6af0744172960ed98 625 Gene3D G3DSA:3.60.21.10 83 227 7.0E-10 T 22-04-2016 IPR029052 Metallo-dependent phosphatase-like SRM_RS13665 c012832b4dee63d6af0744172960ed98 625 Gene3D G3DSA:3.60.21.10 358 450 7.0E-10 T 22-04-2016 IPR029052 Metallo-dependent phosphatase-like SRM_RS02370 fb6c5ca3d929a5d0a4c2e54a19a60e81 329 PANTHER PTHR13414 1 296 9.6E-81 T 22-04-2016 SRM_RS02370 fb6c5ca3d929a5d0a4c2e54a19a60e81 329 SUPERFAMILY SSF160240 232 307 5.49E-9 T 22-04-2016 SRM_RS02370 fb6c5ca3d929a5d0a4c2e54a19a60e81 329 Pfam PF01545 Cation efflux family 9 227 4.1E-32 T 22-04-2016 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 SRM_RS02370 fb6c5ca3d929a5d0a4c2e54a19a60e81 329 TIGRFAM TIGR01297 CDF: cation diffusion facilitator family transporter 5 308 1.2E-43 T 22-04-2016 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 SRM_RS02370 fb6c5ca3d929a5d0a4c2e54a19a60e81 329 SUPERFAMILY SSF161111 4 229 6.8E-38 T 22-04-2016 SRM_RS02370 fb6c5ca3d929a5d0a4c2e54a19a60e81 329 Gene3D G3DSA:1.20.1510.10 5 227 1.2E-31 T 22-04-2016 IPR027469 Cation efflux protein transmembrane domain SRM_RS02370 fb6c5ca3d929a5d0a4c2e54a19a60e81 329 Gene3D G3DSA:3.30.70.1350 230 306 8.1E-8 T 22-04-2016 IPR027470 Cation efflux protein, cytoplasmic domain SRM_RS13670 b7626074b235a28fa4152d111793b37c 836 SUPERFAMILY SSF49464 20 107 2.12E-13 T 22-04-2016 IPR008969 Carboxypeptidase-like, regulatory domain SRM_RS13670 b7626074b235a28fa4152d111793b37c 836 SUPERFAMILY SSF56935 100 453 1.47E-97 T 22-04-2016 SRM_RS13670 b7626074b235a28fa4152d111793b37c 836 SUPERFAMILY SSF56935 483 836 1.47E-97 T 22-04-2016 SRM_RS13670 b7626074b235a28fa4152d111793b37c 836 PANTHER PTHR32552 564 836 5.5E-47 T 22-04-2016 SRM_RS13670 b7626074b235a28fa4152d111793b37c 836 PANTHER PTHR32552 106 543 5.5E-47 T 22-04-2016 SRM_RS13670 b7626074b235a28fa4152d111793b37c 836 Pfam PF07715 TonB-dependent Receptor Plug Domain 121 227 1.1E-12 T 22-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 SRM_RS13670 b7626074b235a28fa4152d111793b37c 836 Gene3D G3DSA:2.60.40.1120 21 109 2.9E-13 T 22-04-2016 IPR014766 Carboxypeptidase, regulatory domain SRM_RS13670 b7626074b235a28fa4152d111793b37c 836 Pfam PF13620 Carboxypeptidase regulatory-like domain 21 101 8.1E-16 T 22-04-2016 SRM_RS13670 b7626074b235a28fa4152d111793b37c 836 PANTHER PTHR32552:SF33 564 836 5.5E-47 T 22-04-2016 SRM_RS13670 b7626074b235a28fa4152d111793b37c 836 PANTHER PTHR32552:SF33 106 543 5.5E-47 T 22-04-2016 SRM_RS13670 b7626074b235a28fa4152d111793b37c 836 Gene3D G3DSA:2.40.170.20 239 836 8.5E-76 T 22-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 SRM_RS13670 b7626074b235a28fa4152d111793b37c 836 Gene3D G3DSA:2.170.130.10 110 238 5.9E-26 T 22-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 SRM_RS13670 b7626074b235a28fa4152d111793b37c 836 Pfam PF00593 TonB dependent receptor 584 833 1.8E-19 T 22-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 SRM_RS12185 d8deeb8dbaa0cd23df1ccad6fd03e3b2 205 SUPERFAMILY SSF52016 7 184 2.35E-44 T 22-04-2016 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel SRM_RS12185 d8deeb8dbaa0cd23df1ccad6fd03e3b2 205 TIGRFAM TIGR00171 leuD: 3-isopropylmalate dehydratase, small subunit 10 177 2.0E-35 T 22-04-2016 IPR004431 3-isopropylmalate dehydratase, small subunit GO:0003861|GO:0009098|GO:0009316 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 SRM_RS12185 d8deeb8dbaa0cd23df1ccad6fd03e3b2 205 Gene3D G3DSA:3.20.19.10 10 178 1.2E-30 T 22-04-2016 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel SRM_RS12185 d8deeb8dbaa0cd23df1ccad6fd03e3b2 205 PANTHER PTHR11670 9 201 6.3E-47 T 22-04-2016 IPR015937 Aconitase/isopropylmalate dehydratase GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 SRM_RS12185 d8deeb8dbaa0cd23df1ccad6fd03e3b2 205 Pfam PF00694 Aconitase C-terminal domain 9 118 4.4E-16 T 22-04-2016 IPR000573 Aconitase A/isopropylmalate dehydratase small subunit, swivel domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 SRM_RS12185 d8deeb8dbaa0cd23df1ccad6fd03e3b2 205 PANTHER PTHR11670:SF27 9 201 6.3E-47 T 22-04-2016 SRM_RS02610 8711e73e1487141f0eac42c0f94cacf7 793 Pfam PF00122 E1-E2 ATPase 254 473 2.7E-57 T 22-04-2016 IPR008250 P-type ATPase, A domain GO:0000166|GO:0046872 SRM_RS02610 8711e73e1487141f0eac42c0f94cacf7 793 TIGRFAM TIGR01525 ATPase-IB_hvy: heavy metal translocating P-type ATPase 222 778 2.7E-146 T 22-04-2016 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 SRM_RS02610 8711e73e1487141f0eac42c0f94cacf7 793 SUPERFAMILY SSF56784 538 776 5.77E-43 T 22-04-2016 IPR023214 HAD-like domain SRM_RS02610 8711e73e1487141f0eac42c0f94cacf7 793 SUPERFAMILY SSF56784 480 500 5.77E-43 T 22-04-2016 IPR023214 HAD-like domain SRM_RS02610 8711e73e1487141f0eac42c0f94cacf7 793 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 604 615 1.2E-20 T 22-04-2016 SRM_RS02610 8711e73e1487141f0eac42c0f94cacf7 793 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 333 347 1.2E-20 T 22-04-2016 SRM_RS02610 8711e73e1487141f0eac42c0f94cacf7 793 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 626 636 1.2E-20 T 22-04-2016 SRM_RS02610 8711e73e1487141f0eac42c0f94cacf7 793 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 678 697 1.2E-20 T 22-04-2016 SRM_RS02610 8711e73e1487141f0eac42c0f94cacf7 793 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 482 496 1.2E-20 T 22-04-2016 SRM_RS02610 8711e73e1487141f0eac42c0f94cacf7 793 Pfam PF00403 Heavy-metal-associated domain 71 130 1.9E-8 T 22-04-2016 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 SRM_RS02610 8711e73e1487141f0eac42c0f94cacf7 793 SUPERFAMILY SSF81665 383 476 3.27E-12 T 22-04-2016 SRM_RS02610 8711e73e1487141f0eac42c0f94cacf7 793 SUPERFAMILY SSF81665 726 763 3.27E-12 T 22-04-2016 SRM_RS02610 8711e73e1487141f0eac42c0f94cacf7 793 SUPERFAMILY SSF81665 248 284 3.27E-12 T 22-04-2016 SRM_RS02610 8711e73e1487141f0eac42c0f94cacf7 793 PRINTS PR00120 H+-transporting ATPase (proton pump) signature 678 694 4.0E-5 T 22-04-2016 IPR001757 P-type ATPase GO:0016021 SRM_RS02610 8711e73e1487141f0eac42c0f94cacf7 793 PRINTS PR00120 H+-transporting ATPase (proton pump) signature 708 733 4.0E-5 T 22-04-2016 IPR001757 P-type ATPase GO:0016021 SRM_RS02610 8711e73e1487141f0eac42c0f94cacf7 793 ProSitePatterns PS00154 E1-E2 ATPases phosphorylation site. 484 490 - T 22-04-2016 IPR018303 P-type ATPase, phosphorylation site SRM_RS02610 8711e73e1487141f0eac42c0f94cacf7 793 Pfam PF00702 haloacid dehalogenase-like hydrolase 478 692 1.2E-25 T 22-04-2016 SRM_RS02610 8711e73e1487141f0eac42c0f94cacf7 793 Gene3D G3DSA:2.70.150.10 238 379 1.2E-21 T 22-04-2016 IPR008250 P-type ATPase, A domain GO:0000166|GO:0046872 SRM_RS02610 8711e73e1487141f0eac42c0f94cacf7 793 PANTHER PTHR24093 57 778 4.3E-156 T 22-04-2016 SRM_RS02610 8711e73e1487141f0eac42c0f94cacf7 793 SUPERFAMILY SSF55008 63 136 3.93E-15 T 22-04-2016 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 SRM_RS02610 8711e73e1487141f0eac42c0f94cacf7 793 Gene3D G3DSA:3.40.50.1000 607 745 6.4E-36 T 22-04-2016 IPR023214 HAD-like domain SRM_RS02610 8711e73e1487141f0eac42c0f94cacf7 793 Gene3D G3DSA:3.40.50.1000 455 498 6.4E-36 T 22-04-2016 IPR023214 HAD-like domain SRM_RS02610 8711e73e1487141f0eac42c0f94cacf7 793 Gene3D G3DSA:3.40.1110.10 502 606 1.0E-10 T 22-04-2016 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 SRM_RS02610 8711e73e1487141f0eac42c0f94cacf7 793 SUPERFAMILY SSF81653 289 375 7.45E-22 T 22-04-2016 SRM_RS02610 8711e73e1487141f0eac42c0f94cacf7 793 Gene3D G3DSA:3.30.70.100 66 144 7.2E-15 T 22-04-2016 SRM_RS02610 8711e73e1487141f0eac42c0f94cacf7 793 TIGRFAM TIGR01511 ATPase-IB1_Cu: copper-translocating P-type ATPase 204 778 2.6E-132 T 22-04-2016 SRM_RS02610 8711e73e1487141f0eac42c0f94cacf7 793 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 255 765 2.6E-78 T 22-04-2016 IPR001757 P-type ATPase GO:0016021 SRM_RS02610 8711e73e1487141f0eac42c0f94cacf7 793 PANTHER PTHR24093:SF50 57 778 4.3E-156 T 22-04-2016 SRM_RS02080 02766361761fa690dad7c941120ca31b 250 Gene3D G3DSA:2.40.50.40 139 206 6.5E-16 T 22-04-2016 SRM_RS02080 02766361761fa690dad7c941120ca31b 250 PANTHER PTHR26402 5 138 1.4E-31 T 22-04-2016 SRM_RS02080 02766361761fa690dad7c941120ca31b 250 Pfam PF04397 LytTr DNA-binding domain 151 245 6.4E-20 T 22-04-2016 IPR007492 LytTR DNA-binding domain GO:0003677 SRM_RS02080 02766361761fa690dad7c941120ca31b 250 Pfam PF00072 Response regulator receiver domain 8 114 1.6E-23 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SRM_RS02080 02766361761fa690dad7c941120ca31b 250 SUPERFAMILY SSF52172 4 144 2.13E-30 T 22-04-2016 IPR011006 CheY-like superfamily SRM_RS02080 02766361761fa690dad7c941120ca31b 250 SMART SM00850 147 246 2.0E-24 T 22-04-2016 IPR007492 LytTR DNA-binding domain GO:0003677 SRM_RS02080 02766361761fa690dad7c941120ca31b 250 Gene3D G3DSA:3.40.50.2300 2 127 1.3E-30 T 22-04-2016 SRM_RS02080 02766361761fa690dad7c941120ca31b 250 SMART SM00448 5 113 7.0E-26 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SRM_RS15445 306e2d4d075804c9aaece2c9fa00fca6 183 TIGRFAM TIGR02447 yiiD_Cterm: putative thioesterase domain 19 161 3.7E-33 T 22-04-2016 IPR012660 Thioesterase, putative SRM_RS15445 306e2d4d075804c9aaece2c9fa00fca6 183 SUPERFAMILY SSF54637 10 161 9.43E-30 T 22-04-2016 IPR029069 HotDog domain SRM_RS15445 306e2d4d075804c9aaece2c9fa00fca6 183 Gene3D G3DSA:3.10.129.10 3 162 1.6E-47 T 22-04-2016 IPR029069 HotDog domain SRM_RS15445 306e2d4d075804c9aaece2c9fa00fca6 183 Pfam PF09500 Putative thioesterase (yiiD_Cterm) 12 161 1.5E-34 T 22-04-2016 IPR012660 Thioesterase, putative SRM_RS12320 62699b04c5c3248255cb2ac44e6d858f 1133 SUPERFAMILY SSF49464 67 154 1.02E-18 T 22-04-2016 IPR008969 Carboxypeptidase-like, regulatory domain SRM_RS12320 62699b04c5c3248255cb2ac44e6d858f 1133 Gene3D G3DSA:2.170.130.10 153 292 2.0E-21 T 22-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 SRM_RS12320 62699b04c5c3248255cb2ac44e6d858f 1133 Pfam PF13715 CarboxypepD_reg-like domain 69 156 1.9E-22 T 22-04-2016 SRM_RS12320 62699b04c5c3248255cb2ac44e6d858f 1133 Gene3D G3DSA:2.40.170.20 409 485 5.2E-38 T 22-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 SRM_RS12320 62699b04c5c3248255cb2ac44e6d858f 1133 Gene3D G3DSA:2.40.170.20 293 313 5.2E-38 T 22-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 SRM_RS12320 62699b04c5c3248255cb2ac44e6d858f 1133 Gene3D G3DSA:2.40.170.20 539 875 5.2E-38 T 22-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 SRM_RS12320 62699b04c5c3248255cb2ac44e6d858f 1133 Gene3D G3DSA:2.40.170.20 912 968 5.2E-38 T 22-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 SRM_RS12320 62699b04c5c3248255cb2ac44e6d858f 1133 Gene3D G3DSA:2.40.170.20 1035 1133 5.2E-38 T 22-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 SRM_RS12320 62699b04c5c3248255cb2ac44e6d858f 1133 TIGRFAM TIGR04057 SusC_RagA_signa: TonB-dependent outer membrane receptor, SusC/RagA subfamily, signature region 268 297 7.1E-16 T 22-04-2016 IPR023997 TonB-dependent outer membrane protein SusC/RagA, conserved site UniPathway: UPA00153 SRM_RS12320 62699b04c5c3248255cb2ac44e6d858f 1133 PANTHER PTHR11532 258 586 1.9E-170 T 22-04-2016 SRM_RS12320 62699b04c5c3248255cb2ac44e6d858f 1133 PANTHER PTHR11532 668 1131 1.9E-170 T 22-04-2016 SRM_RS12320 62699b04c5c3248255cb2ac44e6d858f 1133 PANTHER PTHR11532 60 238 1.9E-170 T 22-04-2016 SRM_RS12320 62699b04c5c3248255cb2ac44e6d858f 1133 SUPERFAMILY SSF56935 533 877 1.72E-76 T 22-04-2016 SRM_RS12320 62699b04c5c3248255cb2ac44e6d858f 1133 SUPERFAMILY SSF56935 410 478 1.72E-76 T 22-04-2016 SRM_RS12320 62699b04c5c3248255cb2ac44e6d858f 1133 SUPERFAMILY SSF56935 935 979 1.72E-76 T 22-04-2016 SRM_RS12320 62699b04c5c3248255cb2ac44e6d858f 1133 SUPERFAMILY SSF56935 154 321 1.72E-76 T 22-04-2016 SRM_RS12320 62699b04c5c3248255cb2ac44e6d858f 1133 Gene3D G3DSA:2.60.40.1120 68 146 1.9E-17 T 22-04-2016 IPR014766 Carboxypeptidase, regulatory domain SRM_RS12320 62699b04c5c3248255cb2ac44e6d858f 1133 Pfam PF07715 TonB-dependent Receptor Plug Domain 165 291 2.4E-20 T 22-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 SRM_RS12320 62699b04c5c3248255cb2ac44e6d858f 1133 PANTHER PTHR11532:SF51 258 586 1.9E-170 T 22-04-2016 SRM_RS12320 62699b04c5c3248255cb2ac44e6d858f 1133 PANTHER PTHR11532:SF51 668 1131 1.9E-170 T 22-04-2016 SRM_RS12320 62699b04c5c3248255cb2ac44e6d858f 1133 PANTHER PTHR11532:SF51 60 238 1.9E-170 T 22-04-2016 SRM_RS12320 62699b04c5c3248255cb2ac44e6d858f 1133 TIGRFAM TIGR04056 OMP_RagA_SusC: TonB-linked outer membrane protein, SusC/RagA family 68 1133 1.1E-168 T 22-04-2016 IPR023996 TonB-dependent outer membrane protein, SusC/RagA UniPathway: UPA00153 SRM_RS07700 320d7b65878a46ed5e73f06b622f8c2c 195 PRINTS PR01576 Peptide deformylase signature 112 130 1.0E-33 T 22-04-2016 IPR000181 Formylmethionine deformylase GO:0005506|GO:0042586 SRM_RS07700 320d7b65878a46ed5e73f06b622f8c2c 195 PRINTS PR01576 Peptide deformylase signature 100 111 1.0E-33 T 22-04-2016 IPR000181 Formylmethionine deformylase GO:0005506|GO:0042586 SRM_RS07700 320d7b65878a46ed5e73f06b622f8c2c 195 PRINTS PR01576 Peptide deformylase signature 131 160 1.0E-33 T 22-04-2016 IPR000181 Formylmethionine deformylase GO:0005506|GO:0042586 SRM_RS07700 320d7b65878a46ed5e73f06b622f8c2c 195 PRINTS PR01576 Peptide deformylase signature 32 61 1.0E-33 T 22-04-2016 IPR000181 Formylmethionine deformylase GO:0005506|GO:0042586 SRM_RS07700 320d7b65878a46ed5e73f06b622f8c2c 195 Gene3D G3DSA:3.90.45.10 3 180 3.3E-59 T 22-04-2016 IPR023635 Peptide deformylase SRM_RS07700 320d7b65878a46ed5e73f06b622f8c2c 195 Pfam PF01327 Polypeptide deformylase 3 162 2.7E-51 T 22-04-2016 IPR023635 Peptide deformylase SRM_RS07700 320d7b65878a46ed5e73f06b622f8c2c 195 PIRSF PIRSF004749 1 188 5.2E-52 T 22-04-2016 IPR000181 Formylmethionine deformylase GO:0005506|GO:0042586 SRM_RS07700 320d7b65878a46ed5e73f06b622f8c2c 195 Hamap MF_00163 Peptide deformylase [def]. 1 173 29.834 T 22-04-2016 IPR000181 Formylmethionine deformylase GO:0005506|GO:0042586 SRM_RS07700 320d7b65878a46ed5e73f06b622f8c2c 195 PANTHER PTHR10458 1 173 2.5E-60 T 22-04-2016 IPR000181 Formylmethionine deformylase GO:0005506|GO:0042586 SRM_RS07700 320d7b65878a46ed5e73f06b622f8c2c 195 SUPERFAMILY SSF56420 1 174 9.81E-56 T 22-04-2016 IPR023635 Peptide deformylase SRM_RS07700 320d7b65878a46ed5e73f06b622f8c2c 195 TIGRFAM TIGR00079 pept_deformyl: peptide deformylase 5 164 1.4E-46 T 22-04-2016 IPR000181 Formylmethionine deformylase GO:0005506|GO:0042586 SRM_RS01365 191f403a7c825dd0b20788b169a8ef8c 125 Gene3D G3DSA:1.10.10.10 29 121 1.1E-35 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SRM_RS01365 191f403a7c825dd0b20788b169a8ef8c 125 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 60 71 1.7E-18 T 22-04-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 SRM_RS01365 191f403a7c825dd0b20788b169a8ef8c 125 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 73 88 1.7E-18 T 22-04-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 SRM_RS01365 191f403a7c825dd0b20788b169a8ef8c 125 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 41 56 1.7E-18 T 22-04-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 SRM_RS01365 191f403a7c825dd0b20788b169a8ef8c 125 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 88 103 1.7E-18 T 22-04-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 SRM_RS01365 191f403a7c825dd0b20788b169a8ef8c 125 ProSitePatterns PS00846 Bacterial regulatory proteins, arsR family signature. 62 80 - T 22-04-2016 IPR018334 ArsR-type transcription regulator, HTH motif GO:0003700|GO:0005622|GO:0006355 SRM_RS01365 191f403a7c825dd0b20788b169a8ef8c 125 SMART SM00418 39 117 2.9E-33 T 22-04-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 SRM_RS01365 191f403a7c825dd0b20788b169a8ef8c 125 PANTHER PTHR33154 38 118 3.1E-27 T 22-04-2016 SRM_RS01365 191f403a7c825dd0b20788b169a8ef8c 125 SUPERFAMILY SSF46785 31 117 1.36E-28 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SRM_RS01365 191f403a7c825dd0b20788b169a8ef8c 125 Pfam PF01022 Bacterial regulatory protein, arsR family 46 91 3.7E-19 T 22-04-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 SRM_RS09990 caece7db9c51a69162ad0ea9dedabd5e 778 Gene3D G3DSA:1.25.40.10 572 594 9.7E-4 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 SRM_RS09990 caece7db9c51a69162ad0ea9dedabd5e 778 Gene3D G3DSA:1.25.40.10 491 538 9.7E-4 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 SRM_RS03100 4d5e9755227d7a7869b1aa1b61fa6bd7 413 SUPERFAMILY SSF103473 7 400 3.14E-72 T 22-04-2016 IPR020846 Major facilitator superfamily domain SRM_RS03100 4d5e9755227d7a7869b1aa1b61fa6bd7 413 Gene3D G3DSA:1.20.1250.20 11 192 2.0E-34 T 22-04-2016 SRM_RS03100 4d5e9755227d7a7869b1aa1b61fa6bd7 413 ProSitePatterns PS00216 Sugar transport proteins signature 1. 270 287 - T 22-04-2016 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 SRM_RS03100 4d5e9755227d7a7869b1aa1b61fa6bd7 413 PANTHER PTHR23501 10 401 6.7E-58 T 22-04-2016 SRM_RS03100 4d5e9755227d7a7869b1aa1b61fa6bd7 413 Pfam PF07690 Major Facilitator Superfamily 16 263 1.7E-36 T 22-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 SRM_RS03100 4d5e9755227d7a7869b1aa1b61fa6bd7 413 Gene3D G3DSA:1.20.1250.20 220 400 5.3E-24 T 22-04-2016 SRM_RS03100 4d5e9755227d7a7869b1aa1b61fa6bd7 413 ProSitePatterns PS00216 Sugar transport proteins signature 1. 66 83 - T 22-04-2016 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 SRM_RS08195 82c0007980215e51b4fcc66f480b0d17 110 ProSitePatterns PS01152 Hypothetical hesB/yadR/yfhF family signature. 91 108 - T 22-04-2016 IPR017870 FeS cluster insertion, C-terminal, conserved site SRM_RS08195 82c0007980215e51b4fcc66f480b0d17 110 TIGRFAM TIGR00049 TIGR00049: iron-sulfur cluster assembly accessory protein 3 109 1.6E-31 T 22-04-2016 IPR016092 FeS cluster insertion protein GO:0005198|GO:0016226|GO:0051536 SRM_RS08195 82c0007980215e51b4fcc66f480b0d17 110 SUPERFAMILY SSF89360 1 98 2.16E-24 T 22-04-2016 IPR000361 FeS cluster biogenesis SRM_RS08195 82c0007980215e51b4fcc66f480b0d17 110 Gene3D G3DSA:2.60.300.12 2 99 5.4E-26 T 22-04-2016 IPR000361 FeS cluster biogenesis SRM_RS08195 82c0007980215e51b4fcc66f480b0d17 110 Pfam PF01521 Iron-sulphur cluster biosynthesis 1 105 2.7E-18 T 22-04-2016 IPR000361 FeS cluster biogenesis SRM_RS04940 4da46053c7b335b030662ef662a34c84 234 PANTHER PTHR36438:SF1 1 234 5.0E-37 T 22-04-2016 SRM_RS04940 4da46053c7b335b030662ef662a34c84 234 Pfam PF04405 Domain of Unknown function (DUF542) 13 58 2.0E-7 T 22-04-2016 IPR019903 Repair of iron centres family SRM_RS04940 4da46053c7b335b030662ef662a34c84 234 Gene3D G3DSA:1.20.120.520 86 233 2.8E-16 T 22-04-2016 SRM_RS04940 4da46053c7b335b030662ef662a34c84 234 PANTHER PTHR36438 1 234 5.0E-37 T 22-04-2016 SRM_RS04940 4da46053c7b335b030662ef662a34c84 234 Pfam PF01814 Hemerythrin HHE cation binding domain 82 230 1.1E-17 T 22-04-2016 IPR012312 Haemerythrin-like SRM_RS15515 9fef11004f1ba182bf718bae5d183e03 417 PANTHER PTHR36220:SF1 43 415 2.7E-21 T 22-04-2016 SRM_RS15515 9fef11004f1ba182bf718bae5d183e03 417 PANTHER PTHR36220 43 415 2.7E-21 T 22-04-2016 SRM_RS15515 9fef11004f1ba182bf718bae5d183e03 417 Pfam PF13415 Galactose oxidase, central domain 177 228 2.1E-6 T 22-04-2016 SRM_RS15515 9fef11004f1ba182bf718bae5d183e03 417 SUPERFAMILY SSF50965 112 401 1.12E-12 T 22-04-2016 IPR011043 Galactose oxidase/kelch, beta-propeller SRM_RS15515 9fef11004f1ba182bf718bae5d183e03 417 Gene3D G3DSA:2.130.10.80 53 353 8.1E-10 T 22-04-2016 IPR015916 Galactose oxidase, beta-propeller SRM_RS15515 9fef11004f1ba182bf718bae5d183e03 417 Pfam PF14312 FG-GAP repeat 46 85 9.0E-6 T 22-04-2016 IPR013517 FG-GAP repeat Reactome: REACT_13552 SRM_RS15515 9fef11004f1ba182bf718bae5d183e03 417 Pfam PF14312 FG-GAP repeat 96 144 1.8E-6 T 22-04-2016 IPR013517 FG-GAP repeat Reactome: REACT_13552 SRM_RS07065 87af0a5378a91a82e1fa62b6c23a8303 70 PRINTS PR00976 Ribosomal protein S21 family signature 38 48 2.1E-6 T 22-04-2016 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 SRM_RS07065 87af0a5378a91a82e1fa62b6c23a8303 70 PRINTS PR00976 Ribosomal protein S21 family signature 26 36 2.1E-6 T 22-04-2016 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 SRM_RS07065 87af0a5378a91a82e1fa62b6c23a8303 70 PRINTS PR00976 Ribosomal protein S21 family signature 14 23 2.1E-6 T 22-04-2016 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 SRM_RS07065 87af0a5378a91a82e1fa62b6c23a8303 70 PRINTS PR00976 Ribosomal protein S21 family signature 6 14 2.1E-6 T 22-04-2016 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 SRM_RS07065 87af0a5378a91a82e1fa62b6c23a8303 70 TIGRFAM TIGR00030 S21p: ribosomal protein bS21 4 59 2.0E-15 T 22-04-2016 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 SRM_RS07065 87af0a5378a91a82e1fa62b6c23a8303 70 Pfam PF01165 Ribosomal protein S21 5 57 7.9E-17 T 22-04-2016 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 SRM_RS07065 87af0a5378a91a82e1fa62b6c23a8303 70 Hamap MF_00358 30S ribosomal protein S21 [rpsU]. 2 58 15.426 T 22-04-2016 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 SRM_RS14650 c3f5e46053aecef1cbd26201d6499abe 387 Pfam PF02119 Flagellar P-ring protein 46 386 2.3E-115 T 22-04-2016 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 SRM_RS14650 c3f5e46053aecef1cbd26201d6499abe 387 Hamap MF_00416 Flagellar P-ring protein [flgI]. 5 387 30.794 T 22-04-2016 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 SRM_RS14650 c3f5e46053aecef1cbd26201d6499abe 387 PANTHER PTHR30381 41 387 6.8E-105 T 22-04-2016 SRM_RS14650 c3f5e46053aecef1cbd26201d6499abe 387 PRINTS PR01010 Flagellar P-ring protein signature 60 75 1.4E-64 T 22-04-2016 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 SRM_RS14650 c3f5e46053aecef1cbd26201d6499abe 387 PRINTS PR01010 Flagellar P-ring protein signature 130 147 1.4E-64 T 22-04-2016 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 SRM_RS14650 c3f5e46053aecef1cbd26201d6499abe 387 PRINTS PR01010 Flagellar P-ring protein signature 45 60 1.4E-64 T 22-04-2016 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 SRM_RS14650 c3f5e46053aecef1cbd26201d6499abe 387 PRINTS PR01010 Flagellar P-ring protein signature 83 98 1.4E-64 T 22-04-2016 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 SRM_RS14650 c3f5e46053aecef1cbd26201d6499abe 387 PRINTS PR01010 Flagellar P-ring protein signature 147 165 1.4E-64 T 22-04-2016 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 SRM_RS14650 c3f5e46053aecef1cbd26201d6499abe 387 PRINTS PR01010 Flagellar P-ring protein signature 187 205 1.4E-64 T 22-04-2016 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 SRM_RS14650 c3f5e46053aecef1cbd26201d6499abe 387 PRINTS PR01010 Flagellar P-ring protein signature 108 127 1.4E-64 T 22-04-2016 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 SRM_RS14650 c3f5e46053aecef1cbd26201d6499abe 387 PRINTS PR01010 Flagellar P-ring protein signature 274 286 1.4E-64 T 22-04-2016 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 SRM_RS14650 c3f5e46053aecef1cbd26201d6499abe 387 PRINTS PR01010 Flagellar P-ring protein signature 212 230 1.4E-64 T 22-04-2016 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 SRM_RS14650 c3f5e46053aecef1cbd26201d6499abe 387 PANTHER PTHR30381:SF0 41 387 6.8E-105 T 22-04-2016 SRM_RS11955 21d8d586d90bb48f2f2e59cab67ed9b3 217 PANTHER PTHR39425 1 180 3.0E-66 T 22-04-2016 SRM_RS11955 21d8d586d90bb48f2f2e59cab67ed9b3 217 PANTHER PTHR39425:SF1 1 180 3.0E-66 T 22-04-2016 SRM_RS11955 21d8d586d90bb48f2f2e59cab67ed9b3 217 SUPERFAMILY SSF48695 25 188 1.07E-44 T 22-04-2016 IPR011031 Multihaem cytochrome SRM_RS11955 21d8d586d90bb48f2f2e59cab67ed9b3 217 PRINTS PR00609 Class III cytochrome C signature 63 70 3.4E-5 T 22-04-2016 IPR002322 Cytochrome c, class III GO:0009055|GO:0020037 SRM_RS11955 21d8d586d90bb48f2f2e59cab67ed9b3 217 PRINTS PR00609 Class III cytochrome C signature 49 58 3.4E-5 T 22-04-2016 IPR002322 Cytochrome c, class III GO:0009055|GO:0020037 SRM_RS11955 21d8d586d90bb48f2f2e59cab67ed9b3 217 PRINTS PR00609 Class III cytochrome C signature 209 216 3.4E-5 T 22-04-2016 IPR002322 Cytochrome c, class III GO:0009055|GO:0020037 SRM_RS11955 21d8d586d90bb48f2f2e59cab67ed9b3 217 PRINTS PR00609 Class III cytochrome C signature 84 95 3.4E-5 T 22-04-2016 IPR002322 Cytochrome c, class III GO:0009055|GO:0020037 SRM_RS11955 21d8d586d90bb48f2f2e59cab67ed9b3 217 Gene3D G3DSA:3.90.10.10 204 216 1.1E-12 T 22-04-2016 SRM_RS11955 21d8d586d90bb48f2f2e59cab67ed9b3 217 Gene3D G3DSA:3.90.10.10 115 171 1.1E-12 T 22-04-2016 SRM_RS11955 21d8d586d90bb48f2f2e59cab67ed9b3 217 Pfam PF14522 Cytochrome c7 and related cytochrome c 52 96 1.6E-6 T 22-04-2016 SRM_RS11955 21d8d586d90bb48f2f2e59cab67ed9b3 217 Pfam PF14522 Cytochrome c7 and related cytochrome c 126 217 5.1E-8 T 22-04-2016 SRM_RS11955 21d8d586d90bb48f2f2e59cab67ed9b3 217 Gene3D G3DSA:3.90.10.10 42 96 1.4E-9 T 22-04-2016 SRM_RS09410 977f0e5133517a2a35cc3d7a0fff4956 271 Hamap MF_00995 Chorismate dehydratase [mqnA]. 2 248 20.223 T 22-04-2016 IPR030868 Chorismate dehydratase GO:0009234|GO:0016829 KEGG: 00130+4.2.1.151|MetaCyc: PWY-7371|MetaCyc: PWY-7374|UniPathway: UPA00079 SRM_RS09410 977f0e5133517a2a35cc3d7a0fff4956 271 Gene3D G3DSA:3.40.190.10 91 170 6.9E-6 T 22-04-2016 SRM_RS09410 977f0e5133517a2a35cc3d7a0fff4956 271 Gene3D G3DSA:3.40.190.10 15 74 1.0E-15 T 22-04-2016 SRM_RS09410 977f0e5133517a2a35cc3d7a0fff4956 271 Gene3D G3DSA:3.40.190.10 171 257 1.0E-15 T 22-04-2016 SRM_RS09410 977f0e5133517a2a35cc3d7a0fff4956 271 Pfam PF02621 Menaquinone biosynthesis 1 242 2.3E-38 T 22-04-2016 IPR003773 Menaquinone biosynthesis enzyme UniPathway: UPA00079 SRM_RS09410 977f0e5133517a2a35cc3d7a0fff4956 271 SUPERFAMILY SSF53850 1 249 1.11E-39 T 22-04-2016 SRM_RS03755 8943622229827a07a4825a982bfb8617 439 ProSitePatterns PS01135 FtsZ protein signature 2. 105 126 - T 22-04-2016 IPR020805 Cell division protein FtsZ, conserved site GO:0005525|GO:0005737 SRM_RS03755 8943622229827a07a4825a982bfb8617 439 Hamap MF_00909 Cell division protein FtsZ [ftsZ]. 16 391 36.875 T 22-04-2016 IPR000158 Cell division protein FtsZ GO:0005525 SRM_RS03755 8943622229827a07a4825a982bfb8617 439 TIGRFAM TIGR00065 ftsZ: cell division protein FtsZ 15 335 1.4E-121 T 22-04-2016 IPR000158 Cell division protein FtsZ GO:0005525 SRM_RS03755 8943622229827a07a4825a982bfb8617 439 PANTHER PTHR30314:SF3 6 390 8.8E-172 T 22-04-2016 SRM_RS03755 8943622229827a07a4825a982bfb8617 439 Pfam PF12327 FtsZ family, C-terminal domain 230 325 5.0E-29 T 22-04-2016 IPR024757 Cell division protein FtsZ, C-terminal SRM_RS03755 8943622229827a07a4825a982bfb8617 439 PANTHER PTHR30314 6 390 8.8E-172 T 22-04-2016 SRM_RS03755 8943622229827a07a4825a982bfb8617 439 Gene3D G3DSA:3.30.1330.20 223 329 4.2E-44 T 22-04-2016 IPR018316 Tubulin/FtsZ, 2-layer sandwich domain SRM_RS03755 8943622229827a07a4825a982bfb8617 439 Pfam PF00091 Tubulin/FtsZ family, GTPase domain 20 181 7.0E-44 T 22-04-2016 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 SRM_RS03755 8943622229827a07a4825a982bfb8617 439 Gene3D G3DSA:3.40.50.1440 19 222 1.9E-89 T 22-04-2016 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 SRM_RS03755 8943622229827a07a4825a982bfb8617 439 SMART SM00864 20 213 3.1E-108 T 22-04-2016 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 SRM_RS03755 8943622229827a07a4825a982bfb8617 439 SMART SM00865 215 333 2.7E-49 T 22-04-2016 IPR018316 Tubulin/FtsZ, 2-layer sandwich domain SRM_RS03755 8943622229827a07a4825a982bfb8617 439 SUPERFAMILY SSF55307 212 327 3.2E-39 T 22-04-2016 IPR008280 Tubulin/FtsZ, C-terminal SRM_RS03755 8943622229827a07a4825a982bfb8617 439 ProSitePatterns PS01134 FtsZ protein signature 1. 52 86 - T 22-04-2016 IPR020805 Cell division protein FtsZ, conserved site GO:0005525|GO:0005737 SRM_RS03755 8943622229827a07a4825a982bfb8617 439 PRINTS PR00423 Cell division protein FtsZ signature 106 126 8.4E-45 T 22-04-2016 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 SRM_RS03755 8943622229827a07a4825a982bfb8617 439 PRINTS PR00423 Cell division protein FtsZ signature 197 219 8.4E-45 T 22-04-2016 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 SRM_RS03755 8943622229827a07a4825a982bfb8617 439 PRINTS PR00423 Cell division protein FtsZ signature 220 241 8.4E-45 T 22-04-2016 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 SRM_RS03755 8943622229827a07a4825a982bfb8617 439 PRINTS PR00423 Cell division protein FtsZ signature 134 155 8.4E-45 T 22-04-2016 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 SRM_RS03755 8943622229827a07a4825a982bfb8617 439 SUPERFAMILY SSF52490 19 216 5.49E-65 T 22-04-2016 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 SRM_RS05325 dd4810eeb5f050f672e7fff7fb35ee38 473 Pfam PF13429 Tetratricopeptide repeat 239 414 4.9E-9 T 22-04-2016 SRM_RS05325 dd4810eeb5f050f672e7fff7fb35ee38 473 Gene3D G3DSA:1.25.40.10 156 265 7.1E-19 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 SRM_RS05325 dd4810eeb5f050f672e7fff7fb35ee38 473 SMART SM00028 204 237 13.0 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 SRM_RS05325 dd4810eeb5f050f672e7fff7fb35ee38 473 SMART SM00028 376 409 0.15 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 SRM_RS05325 dd4810eeb5f050f672e7fff7fb35ee38 473 SMART SM00028 340 373 330.0 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 SRM_RS05325 dd4810eeb5f050f672e7fff7fb35ee38 473 SMART SM00028 98 131 130.0 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 SRM_RS05325 dd4810eeb5f050f672e7fff7fb35ee38 473 SMART SM00028 306 339 15.0 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 SRM_RS05325 dd4810eeb5f050f672e7fff7fb35ee38 473 SMART SM00028 272 305 130.0 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 SRM_RS05325 dd4810eeb5f050f672e7fff7fb35ee38 473 SMART SM00028 136 169 270.0 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 SRM_RS05325 dd4810eeb5f050f672e7fff7fb35ee38 473 SMART SM00028 170 203 100.0 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 SRM_RS05325 dd4810eeb5f050f672e7fff7fb35ee38 473 Gene3D G3DSA:1.25.40.10 96 155 2.3E-6 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 SRM_RS05325 dd4810eeb5f050f672e7fff7fb35ee38 473 SUPERFAMILY SSF48452 101 235 2.28E-11 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 SRM_RS05325 dd4810eeb5f050f672e7fff7fb35ee38 473 Pfam PF14559 Tetratricopeptide repeat 153 211 1.3E-6 T 22-04-2016 SRM_RS05325 dd4810eeb5f050f672e7fff7fb35ee38 473 Gene3D G3DSA:1.25.40.10 266 442 1.4E-21 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 SRM_RS05325 dd4810eeb5f050f672e7fff7fb35ee38 473 SUPERFAMILY SSF48452 195 455 2.78E-26 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 SRM_RS05325 dd4810eeb5f050f672e7fff7fb35ee38 473 PANTHER PTHR23083 99 439 3.5E-33 T 22-04-2016 SRM_RS13970 b45584f31c668b5a9b75e5a1dde04b2f 469 SUPERFAMILY SSF52777 6 154 1.63E-12 T 22-04-2016 SRM_RS13970 b45584f31c668b5a9b75e5a1dde04b2f 469 Pfam PF06974 Protein of unknown function (DUF1298) 308 449 4.9E-42 T 22-04-2016 IPR009721 O-acyltransferase WSD1, C-terminal GO:0004144 KEGG: 00073+2.3.1.20|KEGG: 00561+2.3.1.20|UniPathway: UPA00282 SRM_RS13970 b45584f31c668b5a9b75e5a1dde04b2f 469 Pfam PF03007 Wax ester synthase-like Acyl-CoA acyltransferase domain 7 265 1.1E-35 T 22-04-2016 IPR004255 O-acyltransferase, WSD1, N-terminal GO:0004144|GO:0045017 KEGG: 00073+2.3.1.20|KEGG: 00561+2.3.1.20|UniPathway: UPA00282 SRM_RS13970 b45584f31c668b5a9b75e5a1dde04b2f 469 PANTHER PTHR31650 5 467 2.5E-111 T 22-04-2016 SRM_RS13970 b45584f31c668b5a9b75e5a1dde04b2f 469 PANTHER PTHR31650:SF1 5 467 2.5E-111 T 22-04-2016 SRM_RS13970 b45584f31c668b5a9b75e5a1dde04b2f 469 TIGRFAM TIGR02946 acyl_WS_DGAT: acyltransferase, WS/DGAT/MGAT 7 451 6.2E-121 T 22-04-2016 IPR014292 Acyltransferase, WS/DGAT/MGAT GO:0016746|GO:0045017 KEGG: 00073+2.3.1.20|KEGG: 00561+2.3.1.20|UniPathway: UPA00282 SRM_RS08925 548e45f2e18c7a4ab69b40821c88d7ab 726 Gene3D G3DSA:1.10.150.310 105 172 3.2E-12 T 22-04-2016 IPR023097 Tex RuvX-like domain SRM_RS08925 548e45f2e18c7a4ab69b40821c88d7ab 726 SUPERFAMILY SSF47781 101 157 1.22E-15 T 22-04-2016 IPR010994 RuvA domain 2-like Reactome: REACT_216 SRM_RS08925 548e45f2e18c7a4ab69b40821c88d7ab 726 PANTHER PTHR21180 87 185 2.6E-16 T 22-04-2016 SRM_RS08925 548e45f2e18c7a4ab69b40821c88d7ab 726 Pfam PF12836 Helix-hairpin-helix motif 100 160 4.3E-17 T 22-04-2016 SRM_RS15520 7c13d1a93d046b23f109ebc8bab24ee9 387 SUPERFAMILY SSF51445 346 377 4.74E-84 T 22-04-2016 IPR017853 Glycoside hydrolase superfamily SRM_RS15520 7c13d1a93d046b23f109ebc8bab24ee9 387 SUPERFAMILY SSF51445 34 281 4.74E-84 T 22-04-2016 IPR017853 Glycoside hydrolase superfamily SRM_RS15520 7c13d1a93d046b23f109ebc8bab24ee9 387 Gene3D G3DSA:3.20.20.80 351 386 1.8E-94 T 22-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 SRM_RS15520 7c13d1a93d046b23f109ebc8bab24ee9 387 Gene3D G3DSA:3.20.20.80 30 282 1.8E-94 T 22-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 SRM_RS15520 7c13d1a93d046b23f109ebc8bab24ee9 387 Pfam PF00704 Glycosyl hydrolases family 18 44 374 3.7E-78 T 22-04-2016 IPR001223 Glycoside hydrolase family 18, catalytic domain GO:0004553|GO:0005975 SRM_RS15520 7c13d1a93d046b23f109ebc8bab24ee9 387 ProSitePatterns PS01095 Chitinases family 18 active site. 142 150 - T 22-04-2016 IPR001579 Glycoside hydrolase, chitinase active site GO:0004553|GO:0005975 KEGG: 00520+3.2.1.14|MetaCyc: PWY-6902 SRM_RS15520 7c13d1a93d046b23f109ebc8bab24ee9 387 SMART SM00636 41 374 2.5E-98 T 22-04-2016 IPR011583 Chitinase II GO:0004568|GO:0006032 SRM_RS15520 7c13d1a93d046b23f109ebc8bab24ee9 387 PANTHER PTHR11177 19 386 2.0E-107 T 22-04-2016 SRM_RS15520 7c13d1a93d046b23f109ebc8bab24ee9 387 Gene3D G3DSA:3.10.50.10 283 344 3.1E-11 T 22-04-2016 IPR029070 Chitinase insertion domain SRM_RS15520 7c13d1a93d046b23f109ebc8bab24ee9 387 SUPERFAMILY SSF54556 281 344 2.38E-9 T 22-04-2016 IPR029070 Chitinase insertion domain SRM_RS08005 0285f2664cf7a5fb2f8c49e8b5cb92e2 512 Pfam PF00425 chorismate binding enzyme 243 494 7.1E-74 T 22-04-2016 IPR015890 Chorismate-utilising enzyme, C-terminal SRM_RS08005 0285f2664cf7a5fb2f8c49e8b5cb92e2 512 SUPERFAMILY SSF56322 76 503 4.32E-99 T 22-04-2016 IPR005801 ADC synthase GO:0009058 SRM_RS08005 0285f2664cf7a5fb2f8c49e8b5cb92e2 512 PANTHER PTHR11236 76 510 5.4E-126 T 22-04-2016 SRM_RS08005 0285f2664cf7a5fb2f8c49e8b5cb92e2 512 TIGRFAM TIGR00543 isochor_syn: isochorismate synthase 149 500 4.3E-100 T 22-04-2016 IPR004561 Isochorismate synthase GO:0008909|GO:0009058 KEGG: 00130+5.4.4.2|MetaCyc: PWY-5837|MetaCyc: PWY-5901|MetaCyc: PWY-6406 SRM_RS08005 0285f2664cf7a5fb2f8c49e8b5cb92e2 512 PRINTS PR00095 Anthranilate synthase component I signature 345 358 9.5E-5 T 22-04-2016 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661|UniPathway: UPA00035 SRM_RS08005 0285f2664cf7a5fb2f8c49e8b5cb92e2 512 PRINTS PR00095 Anthranilate synthase component I signature 359 372 9.5E-5 T 22-04-2016 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661|UniPathway: UPA00035 SRM_RS08005 0285f2664cf7a5fb2f8c49e8b5cb92e2 512 PRINTS PR00095 Anthranilate synthase component I signature 437 451 9.5E-5 T 22-04-2016 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661|UniPathway: UPA00035 SRM_RS08005 0285f2664cf7a5fb2f8c49e8b5cb92e2 512 Gene3D G3DSA:3.60.120.10 142 503 8.0E-95 T 22-04-2016 IPR005801 ADC synthase GO:0009058 SRM_RS08005 0285f2664cf7a5fb2f8c49e8b5cb92e2 512 PANTHER PTHR11236:SF3 76 510 5.4E-126 T 22-04-2016 SRM_RS01915 31eaaa99f70ddc8b81a83b468342c833 375 Gene3D G3DSA:3.40.50.2000 169 351 5.6E-23 T 22-04-2016 SRM_RS01915 31eaaa99f70ddc8b81a83b468342c833 375 Pfam PF13439 Glycosyltransferase Family 4 17 186 2.1E-11 T 22-04-2016 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain SRM_RS01915 31eaaa99f70ddc8b81a83b468342c833 375 SUPERFAMILY SSF53756 15 374 4.4E-62 T 22-04-2016 SRM_RS01915 31eaaa99f70ddc8b81a83b468342c833 375 PANTHER PTHR12526 18 375 8.9E-49 T 22-04-2016 SRM_RS01915 31eaaa99f70ddc8b81a83b468342c833 375 Pfam PF00534 Glycosyl transferases group 1 196 351 2.4E-27 T 22-04-2016 IPR001296 Glycosyl transferase, family 1 SRM_RS05570 a55bd475559d9ac9f811526564d6f09d 352 Pfam PF00512 His Kinase A (phospho-acceptor) domain 121 186 6.5E-13 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SRM_RS05570 a55bd475559d9ac9f811526564d6f09d 352 SMART SM00387 233 345 1.3E-40 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SRM_RS05570 a55bd475559d9ac9f811526564d6f09d 352 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 233 343 1.4E-27 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SRM_RS05570 a55bd475559d9ac9f811526564d6f09d 352 PANTHER PTHR24423 99 342 5.3E-82 T 22-04-2016 SRM_RS05570 a55bd475559d9ac9f811526564d6f09d 352 Gene3D G3DSA:3.30.565.10 173 346 7.8E-48 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SRM_RS05570 a55bd475559d9ac9f811526564d6f09d 352 PRINTS PR00344 Bacterial sensor protein C-terminal signature 288 298 7.5E-15 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SRM_RS05570 a55bd475559d9ac9f811526564d6f09d 352 PRINTS PR00344 Bacterial sensor protein C-terminal signature 329 342 7.5E-15 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SRM_RS05570 a55bd475559d9ac9f811526564d6f09d 352 PRINTS PR00344 Bacterial sensor protein C-terminal signature 270 284 7.5E-15 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SRM_RS05570 a55bd475559d9ac9f811526564d6f09d 352 PRINTS PR00344 Bacterial sensor protein C-terminal signature 305 323 7.5E-15 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SRM_RS05570 a55bd475559d9ac9f811526564d6f09d 352 SUPERFAMILY SSF47384 105 188 4.9E-17 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SRM_RS05570 a55bd475559d9ac9f811526564d6f09d 352 SUPERFAMILY SSF55874 177 346 2.23E-49 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SRM_RS05570 a55bd475559d9ac9f811526564d6f09d 352 SMART SM00388 120 187 9.6E-16 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SRM_RS05570 a55bd475559d9ac9f811526564d6f09d 352 Gene3D G3DSA:1.10.287.130 111 172 6.3E-15 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SRM_RS12095 5cb2812ade19ff9a2dc79f3500f1386f 281 PANTHER PTHR11904 4 277 6.5E-98 T 22-04-2016 IPR001369 PNP/MTAP phosphorylase SRM_RS12095 5cb2812ade19ff9a2dc79f3500f1386f 281 SUPERFAMILY SSF53167 11 277 5.98E-74 T 22-04-2016 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 SRM_RS12095 5cb2812ade19ff9a2dc79f3500f1386f 281 Gene3D G3DSA:3.40.50.1580 9 277 2.6E-83 T 22-04-2016 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 SRM_RS12095 5cb2812ade19ff9a2dc79f3500f1386f 281 PANTHER PTHR11904:SF9 4 277 6.5E-98 T 22-04-2016 IPR011268 Purine nucleoside phosphorylase GO:0004731|GO:0006139 KEGG: 00230+2.4.2.1|KEGG: 00240+2.4.2.1|KEGG: 00760+2.4.2.1|MetaCyc: PWY-4202|MetaCyc: PWY-5695|MetaCyc: PWY-6608|MetaCyc: PWY-6609|MetaCyc: PWY-6611|MetaCyc: PWY-6620|MetaCyc: PWY-6627|MetaCyc: PWY-6644|MetaCyc: PWY-7179|MetaCyc: PWY-7179-1|UniPathway: UPA00606 SRM_RS12095 5cb2812ade19ff9a2dc79f3500f1386f 281 PIRSF PIRSF000477 5 279 2.3E-81 T 22-04-2016 IPR011268 Purine nucleoside phosphorylase GO:0004731|GO:0006139 KEGG: 00230+2.4.2.1|KEGG: 00240+2.4.2.1|KEGG: 00760+2.4.2.1|MetaCyc: PWY-4202|MetaCyc: PWY-5695|MetaCyc: PWY-6608|MetaCyc: PWY-6609|MetaCyc: PWY-6611|MetaCyc: PWY-6620|MetaCyc: PWY-6627|MetaCyc: PWY-6644|MetaCyc: PWY-7179|MetaCyc: PWY-7179-1|UniPathway: UPA00606 SRM_RS12095 5cb2812ade19ff9a2dc79f3500f1386f 281 Pfam PF01048 Phosphorylase superfamily 30 276 1.4E-46 T 22-04-2016 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 SRM_RS12095 5cb2812ade19ff9a2dc79f3500f1386f 281 TIGRFAM TIGR01697 PNPH-PUNA-XAPA: inosine/guanosine/xanthosine phosphorylase family 30 276 4.2E-77 T 22-04-2016 IPR011268 Purine nucleoside phosphorylase GO:0004731|GO:0006139 KEGG: 00230+2.4.2.1|KEGG: 00240+2.4.2.1|KEGG: 00760+2.4.2.1|MetaCyc: PWY-4202|MetaCyc: PWY-5695|MetaCyc: PWY-6608|MetaCyc: PWY-6609|MetaCyc: PWY-6611|MetaCyc: PWY-6620|MetaCyc: PWY-6627|MetaCyc: PWY-6644|MetaCyc: PWY-7179|MetaCyc: PWY-7179-1|UniPathway: UPA00606 SRM_RS14435 409425fbcd3b936d3d74701c532c6ce7 631 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 379 594 1.4E-52 T 22-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 SRM_RS14435 409425fbcd3b936d3d74701c532c6ce7 631 SUPERFAMILY SSF58104 287 596 6.8E-80 T 22-04-2016 SRM_RS14435 409425fbcd3b936d3d74701c532c6ce7 631 SMART SM00304 487 540 47.0 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 SRM_RS14435 409425fbcd3b936d3d74701c532c6ce7 631 SMART SM00304 389 445 94.0 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 SRM_RS14435 409425fbcd3b936d3d74701c532c6ce7 631 SMART SM00304 187 239 6.4E-14 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 SRM_RS14435 409425fbcd3b936d3d74701c532c6ce7 631 SMART SM00304 267 319 8.4E-7 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 SRM_RS14435 409425fbcd3b936d3d74701c532c6ce7 631 PANTHER PTHR32089 302 598 3.2E-123 T 22-04-2016 SRM_RS14435 409425fbcd3b936d3d74701c532c6ce7 631 PANTHER PTHR32089 1 221 3.2E-123 T 22-04-2016 SRM_RS14435 409425fbcd3b936d3d74701c532c6ce7 631 SMART SM00283 334 595 1.3E-84 T 22-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 SRM_RS14435 409425fbcd3b936d3d74701c532c6ce7 631 Pfam PF00672 HAMP domain 168 233 4.0E-16 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 SRM_RS14435 409425fbcd3b936d3d74701c532c6ce7 631 SUPERFAMILY SSF158472 187 233 2.48E-10 T 22-04-2016 SRM_RS14435 409425fbcd3b936d3d74701c532c6ce7 631 Gene3D G3DSA:1.10.287.950 348 565 3.8E-59 T 22-04-2016 SRM_RS10070 7649b82cd17268ec5507aa09cef1c282 356 Pfam PF01113 Dihydrodipicolinate reductase, N-terminus 25 121 5.1E-7 T 22-04-2016 IPR000846 Dihydrodipicolinate reductase, N-terminal GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 SRM_RS10070 7649b82cd17268ec5507aa09cef1c282 356 SUPERFAMILY SSF51735 20 174 3.79E-15 T 22-04-2016 IPR016040 NAD(P)-binding domain SRM_RS10070 7649b82cd17268ec5507aa09cef1c282 356 Gene3D G3DSA:3.40.50.720 18 189 2.0E-21 T 22-04-2016 IPR016040 NAD(P)-binding domain SRM_RS08800 6f25b2984acccfab9c2bf4104259c53a 342 SUPERFAMILY SSF50129 9 161 6.6E-21 T 22-04-2016 IPR011032 GroES-like SRM_RS08800 6f25b2984acccfab9c2bf4104259c53a 342 Gene3D G3DSA:3.40.50.720 158 269 1.2E-14 T 22-04-2016 IPR016040 NAD(P)-binding domain SRM_RS08800 6f25b2984acccfab9c2bf4104259c53a 342 SUPERFAMILY SSF51735 129 276 2.45E-15 T 22-04-2016 IPR016040 NAD(P)-binding domain SRM_RS08800 6f25b2984acccfab9c2bf4104259c53a 342 PANTHER PTHR11695 17 53 1.1E-46 T 22-04-2016 IPR002085 Alcohol dehydrogenase superfamily, zinc-type GO:0008270|GO:0016491|GO:0055114 SRM_RS08800 6f25b2984acccfab9c2bf4104259c53a 342 PANTHER PTHR11695 69 331 1.1E-46 T 22-04-2016 IPR002085 Alcohol dehydrogenase superfamily, zinc-type GO:0008270|GO:0016491|GO:0055114 SRM_RS08800 6f25b2984acccfab9c2bf4104259c53a 342 PANTHER PTHR11695:SF498 17 53 1.1E-46 T 22-04-2016 SRM_RS08800 6f25b2984acccfab9c2bf4104259c53a 342 PANTHER PTHR11695:SF498 69 331 1.1E-46 T 22-04-2016 SRM_RS08800 6f25b2984acccfab9c2bf4104259c53a 342 Gene3D G3DSA:3.90.180.10 8 157 1.5E-16 T 22-04-2016 IPR011032 GroES-like SRM_RS10980 05d1f0a18aafd72640232baf4581239a 1171 SUPERFAMILY SSF56935 778 823 3.11E-53 T 22-04-2016 SRM_RS10980 05d1f0a18aafd72640232baf4581239a 1171 SUPERFAMILY SSF56935 861 980 3.11E-53 T 22-04-2016 SRM_RS10980 05d1f0a18aafd72640232baf4581239a 1171 SUPERFAMILY SSF56935 109 327 3.11E-53 T 22-04-2016 SRM_RS10980 05d1f0a18aafd72640232baf4581239a 1171 SUPERFAMILY SSF56935 575 713 3.11E-53 T 22-04-2016 SRM_RS10980 05d1f0a18aafd72640232baf4581239a 1171 SUPERFAMILY SSF56935 373 527 3.11E-53 T 22-04-2016 SRM_RS10980 05d1f0a18aafd72640232baf4581239a 1171 SUPERFAMILY SSF56935 1052 1088 3.11E-53 T 22-04-2016 SRM_RS10980 05d1f0a18aafd72640232baf4581239a 1171 Pfam PF13620 Carboxypeptidase regulatory-like domain 31 113 7.9E-22 T 22-04-2016 SRM_RS10980 05d1f0a18aafd72640232baf4581239a 1171 Gene3D G3DSA:2.60.40.1120 31 119 4.1E-16 T 22-04-2016 IPR014766 Carboxypeptidase, regulatory domain SRM_RS10980 05d1f0a18aafd72640232baf4581239a 1171 PANTHER PTHR30069 289 561 1.0E-69 T 22-04-2016 SRM_RS10980 05d1f0a18aafd72640232baf4581239a 1171 PANTHER PTHR30069 748 1097 1.0E-69 T 22-04-2016 SRM_RS10980 05d1f0a18aafd72640232baf4581239a 1171 PANTHER PTHR30069 9 272 1.0E-69 T 22-04-2016 SRM_RS10980 05d1f0a18aafd72640232baf4581239a 1171 PANTHER PTHR30069 598 730 1.0E-69 T 22-04-2016 SRM_RS10980 05d1f0a18aafd72640232baf4581239a 1171 Gene3D G3DSA:2.40.170.20 783 978 1.9E-33 T 22-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 SRM_RS10980 05d1f0a18aafd72640232baf4581239a 1171 Gene3D G3DSA:2.40.170.20 250 522 1.9E-33 T 22-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 SRM_RS10980 05d1f0a18aafd72640232baf4581239a 1171 Gene3D G3DSA:2.40.170.20 571 572 1.9E-33 T 22-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 SRM_RS10980 05d1f0a18aafd72640232baf4581239a 1171 Gene3D G3DSA:2.40.170.20 607 732 1.9E-33 T 22-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 SRM_RS10980 05d1f0a18aafd72640232baf4581239a 1171 Gene3D G3DSA:2.40.170.20 1050 1087 1.9E-33 T 22-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 SRM_RS10980 05d1f0a18aafd72640232baf4581239a 1171 PANTHER PTHR30069:SF6 289 561 1.0E-69 T 22-04-2016 SRM_RS10980 05d1f0a18aafd72640232baf4581239a 1171 PANTHER PTHR30069:SF6 748 1097 1.0E-69 T 22-04-2016 SRM_RS10980 05d1f0a18aafd72640232baf4581239a 1171 PANTHER PTHR30069:SF6 9 272 1.0E-69 T 22-04-2016 SRM_RS10980 05d1f0a18aafd72640232baf4581239a 1171 PANTHER PTHR30069:SF6 598 730 1.0E-69 T 22-04-2016 SRM_RS10980 05d1f0a18aafd72640232baf4581239a 1171 Gene3D G3DSA:2.170.130.10 120 249 3.9E-11 T 22-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 SRM_RS10980 05d1f0a18aafd72640232baf4581239a 1171 SUPERFAMILY SSF49452 28 113 4.71E-15 T 22-04-2016 IPR013784 Carbohydrate-binding-like fold GO:0030246 SRM_RS15665 5e7a4da6ee5f18cd05539f2e1cbc8339 511 SUPERFAMILY SSF48452 20 510 6.64E-111 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 SRM_RS15665 5e7a4da6ee5f18cd05539f2e1cbc8339 511 Pfam PF07980 SusD family 278 510 2.1E-36 T 22-04-2016 IPR012944 RagB/SusD domain SRM_RS15665 5e7a4da6ee5f18cd05539f2e1cbc8339 511 Gene3D G3DSA:1.25.40.10 217 318 7.1E-31 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 SRM_RS15665 5e7a4da6ee5f18cd05539f2e1cbc8339 511 Gene3D G3DSA:1.25.40.10 358 460 7.1E-31 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 SRM_RS15665 5e7a4da6ee5f18cd05539f2e1cbc8339 511 Pfam PF14322 Starch-binding associating with outer membrane 25 231 1.3E-22 T 22-04-2016 SRM_RS12900 f7f57298f6490d9020e88036a60c4158 314 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 109 302 1.5E-25 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 SRM_RS12900 f7f57298f6490d9020e88036a60c4158 314 TIGRFAM TIGR00974 3a0107s02c: phosphate ABC transporter, permease protein PstA 45 308 1.3E-84 T 22-04-2016 IPR005672 Phosphate transport system permease protein PstA GO:0005315|GO:0005887|GO:0035435 SRM_RS12900 f7f57298f6490d9020e88036a60c4158 314 SUPERFAMILY SSF161098 35 303 1.21E-39 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 SRM_RS12900 f7f57298f6490d9020e88036a60c4158 314 PANTHER PTHR30425:SF2 15 314 1.8E-135 T 22-04-2016 SRM_RS12900 f7f57298f6490d9020e88036a60c4158 314 PANTHER PTHR30425 15 314 1.8E-135 T 22-04-2016 SRM_RS12900 f7f57298f6490d9020e88036a60c4158 314 Gene3D G3DSA:1.10.3720.10 42 310 1.2E-44 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 SRM_RS10230 3837f57a78b7f290b6e4da469c4a89c6 132 Hamap MF_00003 Ribosome-binding factor A [rbfA]. 1 117 17.199 T 22-04-2016 IPR000238 Ribosome-binding factor A GO:0006364 SRM_RS10230 3837f57a78b7f290b6e4da469c4a89c6 132 ProDom PD007327 FACTOR A RIBOSOME-BINDING PROCESSING RRNA 3D-STRUCTURE RIBOSOMAL-BINDING PRECURSOR A RBFA 6 97 2.0E-14 T 22-04-2016 IPR000238 Ribosome-binding factor A GO:0006364 SRM_RS10230 3837f57a78b7f290b6e4da469c4a89c6 132 PANTHER PTHR33515 6 132 8.2E-24 T 22-04-2016 SRM_RS10230 3837f57a78b7f290b6e4da469c4a89c6 132 Gene3D G3DSA:3.30.300.20 5 118 5.1E-29 T 22-04-2016 IPR015946 K homology domain-like, alpha/beta SRM_RS10230 3837f57a78b7f290b6e4da469c4a89c6 132 Pfam PF02033 Ribosome-binding factor A 6 110 1.6E-25 T 22-04-2016 IPR000238 Ribosome-binding factor A GO:0006364 SRM_RS10230 3837f57a78b7f290b6e4da469c4a89c6 132 TIGRFAM TIGR00082 rbfA: ribosome-binding factor A 5 115 1.2E-21 T 22-04-2016 IPR000238 Ribosome-binding factor A GO:0006364 SRM_RS10230 3837f57a78b7f290b6e4da469c4a89c6 132 SUPERFAMILY SSF89919 5 113 2.62E-25 T 22-04-2016 IPR023799 Ribosome-binding factor A domain SRM_RS10465 36b274e83ed18c1c4f7a69da2fa625d3 122 Pfam PF02021 Uncharacterised protein family UPF0102 11 103 3.9E-25 T 22-04-2016 IPR003509 Uncharacterised protein family UPF0102 SRM_RS10465 36b274e83ed18c1c4f7a69da2fa625d3 122 PANTHER PTHR34039 1 122 6.5E-36 T 22-04-2016 SRM_RS10465 36b274e83ed18c1c4f7a69da2fa625d3 122 PANTHER PTHR34039:SF1 1 122 6.5E-36 T 22-04-2016 SRM_RS10465 36b274e83ed18c1c4f7a69da2fa625d3 122 Hamap MF_00048 UPF0102 protein YraN [yraN]. 4 116 19.985 T 22-04-2016 IPR003509 Uncharacterised protein family UPF0102 SRM_RS10465 36b274e83ed18c1c4f7a69da2fa625d3 122 TIGRFAM TIGR00252 TIGR00252: TIGR00252 family protein 4 114 1.7E-20 T 22-04-2016 IPR003509 Uncharacterised protein family UPF0102 SRM_RS10465 36b274e83ed18c1c4f7a69da2fa625d3 122 Gene3D G3DSA:3.40.1350.10 11 121 9.8E-32 T 22-04-2016 IPR011856 tRNA endonuclease-like domain GO:0003676|GO:0004518 SRM_RS10465 36b274e83ed18c1c4f7a69da2fa625d3 122 SUPERFAMILY SSF52980 5 111 4.29E-17 T 22-04-2016 IPR011335 Restriction endonuclease type II-like SRM_RS00430 380b4cfd17019855dd4ca7107429b24d 256 PANTHER PTHR11806 6 252 6.1E-124 T 22-04-2016 SRM_RS00430 380b4cfd17019855dd4ca7107429b24d 256 PANTHER PTHR11806:SF0 6 252 6.1E-124 T 22-04-2016 SRM_RS00430 380b4cfd17019855dd4ca7107429b24d 256 SUPERFAMILY SSF51905 114 250 2.22E-41 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SRM_RS00430 380b4cfd17019855dd4ca7107429b24d 256 SUPERFAMILY SSF51905 24 83 2.22E-41 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SRM_RS00430 380b4cfd17019855dd4ca7107429b24d 256 Pfam PF01134 Glucose inhibited division protein A 25 252 5.2E-84 T 22-04-2016 IPR002218 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG-related GO:0008033|GO:0050660 SRM_RS00430 380b4cfd17019855dd4ca7107429b24d 256 Gene3D G3DSA:3.50.50.60 23 249 1.1E-34 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SRM_RS00430 380b4cfd17019855dd4ca7107429b24d 256 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 170 179 2.1E-6 T 22-04-2016 SRM_RS00430 380b4cfd17019855dd4ca7107429b24d 256 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 25 47 2.1E-6 T 22-04-2016 SRM_RS06690 48b0f36d23a55dd29ef68e5103c09aa8 477 Pfam PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family 29 468 2.0E-83 T 22-04-2016 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 SRM_RS06690 48b0f36d23a55dd29ef68e5103c09aa8 477 PRINTS PR00922 D-Ala-D-Ala carboxypeptidase 3 (S13) family signature 67 86 1.4E-29 T 22-04-2016 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 SRM_RS06690 48b0f36d23a55dd29ef68e5103c09aa8 477 PRINTS PR00922 D-Ala-D-Ala carboxypeptidase 3 (S13) family signature 356 370 1.4E-29 T 22-04-2016 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 SRM_RS06690 48b0f36d23a55dd29ef68e5103c09aa8 477 PRINTS PR00922 D-Ala-D-Ala carboxypeptidase 3 (S13) family signature 303 325 1.4E-29 T 22-04-2016 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 SRM_RS06690 48b0f36d23a55dd29ef68e5103c09aa8 477 PRINTS PR00922 D-Ala-D-Ala carboxypeptidase 3 (S13) family signature 430 443 1.4E-29 T 22-04-2016 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 SRM_RS06690 48b0f36d23a55dd29ef68e5103c09aa8 477 PRINTS PR00922 D-Ala-D-Ala carboxypeptidase 3 (S13) family signature 371 385 1.4E-29 T 22-04-2016 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 SRM_RS06690 48b0f36d23a55dd29ef68e5103c09aa8 477 PANTHER PTHR30023:SF0 6 477 1.1E-68 T 22-04-2016 SRM_RS06690 48b0f36d23a55dd29ef68e5103c09aa8 477 SUPERFAMILY SSF56601 25 472 9.97E-80 T 22-04-2016 IPR012338 Beta-lactamase/transpeptidase-like SRM_RS06690 48b0f36d23a55dd29ef68e5103c09aa8 477 Gene3D G3DSA:3.40.710.10 242 472 2.0E-55 T 22-04-2016 IPR012338 Beta-lactamase/transpeptidase-like SRM_RS06690 48b0f36d23a55dd29ef68e5103c09aa8 477 Gene3D G3DSA:3.40.710.10 50 116 1.1E-5 T 22-04-2016 IPR012338 Beta-lactamase/transpeptidase-like SRM_RS06690 48b0f36d23a55dd29ef68e5103c09aa8 477 TIGRFAM TIGR00666 PBP4: D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase 57 453 5.4E-66 T 22-04-2016 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 SRM_RS06690 48b0f36d23a55dd29ef68e5103c09aa8 477 PANTHER PTHR30023 6 477 1.1E-68 T 22-04-2016 SRM_RS10715 33014fa37a06e3adb3cb4d978bac2732 176 PANTHER PTHR28055 24 176 1.4E-45 T 22-04-2016 SRM_RS10715 33014fa37a06e3adb3cb4d978bac2732 176 PANTHER PTHR28055:SF1 24 176 1.4E-45 T 22-04-2016 SRM_RS10715 33014fa37a06e3adb3cb4d978bac2732 176 Gene3D G3DSA:1.10.1510.10 25 118 7.6E-28 T 22-04-2016 SRM_RS10715 33014fa37a06e3adb3cb4d978bac2732 176 Pfam PF09424 Yqey-like protein 28 174 8.1E-47 T 22-04-2016 IPR019004 Uncharacterised domain YOR215C, mitochondrial SRM_RS10715 33014fa37a06e3adb3cb4d978bac2732 176 SUPERFAMILY SSF89095 25 175 6.8E-38 T 22-04-2016 IPR003789 Aspartyl/glutamyl-tRNA amidotransferase subunit B-related GO:0016884 SRM_RS10715 33014fa37a06e3adb3cb4d978bac2732 176 Gene3D G3DSA:1.10.10.410 119 175 7.7E-21 T 22-04-2016 IPR023168 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B, C-terminal SRM_RS04845 5e0ca730f2330ef375a5b559f4e101e5 343 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 36 339 4.5E-75 T 22-04-2016 IPR006143 RND efflux pump, membrane fusion protein GO:0016020|GO:0055085 SRM_RS04845 5e0ca730f2330ef375a5b559f4e101e5 343 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 45 259 5.9E-30 T 22-04-2016 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain SRM_RS04845 5e0ca730f2330ef375a5b559f4e101e5 343 PANTHER PTHR30469:SF11 5 341 1.7E-82 T 22-04-2016 SRM_RS04845 5e0ca730f2330ef375a5b559f4e101e5 343 Gene3D G3DSA:2.40.50.100 154 185 2.0E-17 T 22-04-2016 SRM_RS04845 5e0ca730f2330ef375a5b559f4e101e5 343 Gene3D G3DSA:2.40.50.100 59 93 2.0E-17 T 22-04-2016 SRM_RS04845 5e0ca730f2330ef375a5b559f4e101e5 343 SUPERFAMILY SSF111369 49 266 6.8E-44 T 22-04-2016 SRM_RS04845 5e0ca730f2330ef375a5b559f4e101e5 343 PANTHER PTHR30469 5 341 1.7E-82 T 22-04-2016 SRM_RS09665 08f897ca5412f91aa1dfc93da1b9e757 391 PANTHER PTHR22916:SF9 206 293 7.6E-60 T 22-04-2016 SRM_RS09665 08f897ca5412f91aa1dfc93da1b9e757 391 PANTHER PTHR22916:SF9 45 186 7.6E-60 T 22-04-2016 SRM_RS09665 08f897ca5412f91aa1dfc93da1b9e757 391 SUPERFAMILY SSF53448 28 301 1.76E-66 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases SRM_RS09665 08f897ca5412f91aa1dfc93da1b9e757 391 Gene3D G3DSA:3.90.550.10 49 297 1.3E-56 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases SRM_RS09665 08f897ca5412f91aa1dfc93da1b9e757 391 PANTHER PTHR22916 206 293 7.6E-60 T 22-04-2016 SRM_RS09665 08f897ca5412f91aa1dfc93da1b9e757 391 PANTHER PTHR22916 45 186 7.6E-60 T 22-04-2016 SRM_RS09665 08f897ca5412f91aa1dfc93da1b9e757 391 Pfam PF00535 Glycosyl transferase family 2 51 230 1.6E-28 T 22-04-2016 IPR001173 Glycosyltransferase 2-like SRM_RS05560 98303d4710ac6ba13433e38034dd79a7 138 Pfam PF00166 Chaperonin 10 Kd subunit 6 112 3.3E-9 T 22-04-2016 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 SRM_RS05560 98303d4710ac6ba13433e38034dd79a7 138 Gene3D G3DSA:2.30.33.40 4 112 1.8E-15 T 22-04-2016 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 SRM_RS05560 98303d4710ac6ba13433e38034dd79a7 138 PANTHER PTHR10772 8 56 1.1E-12 T 22-04-2016 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 SRM_RS05560 98303d4710ac6ba13433e38034dd79a7 138 PANTHER PTHR10772 72 122 1.1E-12 T 22-04-2016 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 SRM_RS05560 98303d4710ac6ba13433e38034dd79a7 138 SUPERFAMILY SSF50129 3 112 5.53E-13 T 22-04-2016 IPR011032 GroES-like SRM_RS12310 f1a959f1a10697355287e9ff02fc209a 407 Pfam PF02469 Fasciclin domain 165 277 1.6E-13 T 22-04-2016 IPR000782 FAS1 domain SRM_RS12310 f1a959f1a10697355287e9ff02fc209a 407 Gene3D G3DSA:2.30.180.10 161 284 1.2E-17 T 22-04-2016 IPR000782 FAS1 domain SRM_RS12310 f1a959f1a10697355287e9ff02fc209a 407 SMART SM00554 190 284 2.3E-8 T 22-04-2016 IPR000782 FAS1 domain SRM_RS12310 f1a959f1a10697355287e9ff02fc209a 407 SUPERFAMILY SSF82153 155 284 9.94E-19 T 22-04-2016 IPR000782 FAS1 domain SRM_RS16085 a31baf82ee9940d307d8901043957857 249 Pfam PF06347 Bacterial SH3 domain 194 246 2.6E-9 T 22-04-2016 IPR010466 Protein of unknown function DUF1058 SRM_RS16085 a31baf82ee9940d307d8901043957857 249 Pfam PF13414 TPR repeat 34 73 1.1E-7 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 SRM_RS16085 a31baf82ee9940d307d8901043957857 249 SUPERFAMILY SSF48452 23 100 3.13E-12 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 SRM_RS16085 a31baf82ee9940d307d8901043957857 249 Gene3D G3DSA:1.25.40.10 22 100 1.4E-14 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 SRM_RS16085 a31baf82ee9940d307d8901043957857 249 SMART SM00028 60 93 2.1 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 SRM_RS16085 a31baf82ee9940d307d8901043957857 249 SMART SM00028 26 59 31.0 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 SRM_RS09030 2d158794726754df61e00b5ff593bf5f 479 Pfam PF01488 Shikimate / quinate 5-dehydrogenase 178 299 1.3E-26 T 22-04-2016 IPR006151 Quinate/shikimate 5-dehydrogenase/glutamyl-tRNA reductase SRM_RS09030 2d158794726754df61e00b5ff593bf5f 479 Pfam PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain 315 410 7.1E-18 T 22-04-2016 IPR015896 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase, dimerisation domain GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188|UniPathway: UPA00251 SRM_RS09030 2d158794726754df61e00b5ff593bf5f 479 TIGRFAM TIGR01035 hemA: glutamyl-tRNA reductase 5 393 2.2E-88 T 22-04-2016 IPR000343 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188|UniPathway: UPA00251 SRM_RS09030 2d158794726754df61e00b5ff593bf5f 479 Hamap MF_00087 Glutamyl-tRNA reductase [hemA]. 2 410 24.136 T 22-04-2016 IPR000343 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188|UniPathway: UPA00251 SRM_RS09030 2d158794726754df61e00b5ff593bf5f 479 PANTHER PTHR13812 1 427 1.6E-88 T 22-04-2016 SRM_RS09030 2d158794726754df61e00b5ff593bf5f 479 SUPERFAMILY SSF69742 1 153 1.57E-36 T 22-04-2016 IPR015895 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase, N-terminal GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188|UniPathway: UPA00251 SRM_RS09030 2d158794726754df61e00b5ff593bf5f 479 PIRSF PIRSF000445 1 426 1.9E-126 T 22-04-2016 IPR000343 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188|UniPathway: UPA00251 SRM_RS09030 2d158794726754df61e00b5ff593bf5f 479 Pfam PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain 6 151 3.7E-38 T 22-04-2016 IPR015895 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase, N-terminal GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188|UniPathway: UPA00251 SRM_RS09030 2d158794726754df61e00b5ff593bf5f 479 PANTHER PTHR13812:SF18 1 427 1.6E-88 T 22-04-2016 SRM_RS09030 2d158794726754df61e00b5ff593bf5f 479 Gene3D G3DSA:3.40.50.720 166 302 4.1E-26 T 22-04-2016 IPR016040 NAD(P)-binding domain SRM_RS09030 2d158794726754df61e00b5ff593bf5f 479 SUPERFAMILY SSF69075 312 393 3.4E-11 T 22-04-2016 IPR015896 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase, dimerisation domain GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188|UniPathway: UPA00251 SRM_RS09030 2d158794726754df61e00b5ff593bf5f 479 SUPERFAMILY SSF51735 156 304 2.62E-25 T 22-04-2016 IPR016040 NAD(P)-binding domain SRM_RS04520 4dcce190983e174eb2a0c756fa0e981f 577 PANTHER PTHR34473:SF1 51 555 2.4E-70 T 22-04-2016 SRM_RS04520 4dcce190983e174eb2a0c756fa0e981f 577 Pfam PF03703 Bacterial PH domain 459 533 2.8E-5 T 22-04-2016 IPR005182 Domain of unknown function DUF304 SRM_RS04520 4dcce190983e174eb2a0c756fa0e981f 577 Pfam PF03703 Bacterial PH domain 114 191 4.2E-21 T 22-04-2016 IPR005182 Domain of unknown function DUF304 SRM_RS04520 4dcce190983e174eb2a0c756fa0e981f 577 Pfam PF03703 Bacterial PH domain 306 388 4.2E-13 T 22-04-2016 IPR005182 Domain of unknown function DUF304 SRM_RS04520 4dcce190983e174eb2a0c756fa0e981f 577 PIRSF PIRSF026631 54 550 2.5E-81 T 22-04-2016 IPR014529 Uncharacterised conserved protein UCP026631 SRM_RS04520 4dcce190983e174eb2a0c756fa0e981f 577 PANTHER PTHR34473 51 555 2.4E-70 T 22-04-2016 SRM_RS02985 c1e8a3ddc65335e9d4151775aac6efe7 527 SUPERFAMILY SSF75304 39 508 4.84E-116 T 22-04-2016 IPR023631 Amidase signature domain KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 SRM_RS02985 c1e8a3ddc65335e9d4151775aac6efe7 527 Gene3D G3DSA:3.90.1300.10 41 510 4.2E-116 T 22-04-2016 IPR023631 Amidase signature domain KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 SRM_RS02985 c1e8a3ddc65335e9d4151775aac6efe7 527 Pfam PF01425 Amidase 68 498 4.9E-87 T 22-04-2016 IPR023631 Amidase signature domain KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 SRM_RS02985 c1e8a3ddc65335e9d4151775aac6efe7 527 PANTHER PTHR11895 46 515 7.8E-110 T 22-04-2016 IPR000120 Amidase GO:0016884 KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 SRM_RS11180 90a99d8d34e78e40651d629af35bab08 528 SUPERFAMILY SSF56219 444 523 3.53E-22 T 22-04-2016 IPR005135 Endonuclease/exonuclease/phosphatase SRM_RS11180 90a99d8d34e78e40651d629af35bab08 528 SUPERFAMILY SSF56219 236 417 3.53E-22 T 22-04-2016 IPR005135 Endonuclease/exonuclease/phosphatase SRM_RS11180 90a99d8d34e78e40651d629af35bab08 528 Pfam PF03372 Endonuclease/Exonuclease/phosphatase family 265 518 6.3E-13 T 22-04-2016 IPR005135 Endonuclease/exonuclease/phosphatase SRM_RS11180 90a99d8d34e78e40651d629af35bab08 528 Gene3D G3DSA:3.60.10.10 260 525 9.1E-13 T 22-04-2016 IPR005135 Endonuclease/exonuclease/phosphatase SRM_RS04355 6c4609bb820cac1f30b4c67603617391 100 Pfam PF01548 Transposase 5 99 4.6E-11 T 22-04-2016 IPR002525 Transposase, IS111A/IS1328/IS1533, N-terminal GO:0003677|GO:0004803|GO:0006313 SRM_RS10160 09c6c591a2c8d1afbd74ac5904e66ce9 146 TIGRFAM TIGR01632 L11_bact: ribosomal protein uL11 5 140 5.8E-56 T 22-04-2016 IPR006519 Ribosomal protein L11, bacterial-type GO:0003735|GO:0005840|GO:0006412 SRM_RS10160 09c6c591a2c8d1afbd74ac5904e66ce9 146 Hamap MF_00736 50S ribosomal protein L11 [rplK]. 5 141 29.602 T 22-04-2016 IPR000911 Ribosomal protein L11/L12 GO:0003735|GO:0005840|GO:0006412 SRM_RS10160 09c6c591a2c8d1afbd74ac5904e66ce9 146 Pfam PF03946 Ribosomal protein L11, N-terminal domain 9 66 6.0E-29 T 22-04-2016 IPR020784 Ribosomal protein L11, N-terminal SRM_RS10160 09c6c591a2c8d1afbd74ac5904e66ce9 146 SUPERFAMILY SSF54747 3 83 8.37E-29 T 22-04-2016 IPR020784 Ribosomal protein L11, N-terminal SRM_RS10160 09c6c591a2c8d1afbd74ac5904e66ce9 146 SMART SM00649 9 140 7.7E-72 T 22-04-2016 IPR000911 Ribosomal protein L11/L12 GO:0003735|GO:0005840|GO:0006412 SRM_RS10160 09c6c591a2c8d1afbd74ac5904e66ce9 146 Gene3D G3DSA:1.10.10.250 72 140 2.2E-23 T 22-04-2016 IPR020783 Ribosomal protein L11, C-terminal GO:0003735|GO:0005840|GO:0006412 SRM_RS10160 09c6c591a2c8d1afbd74ac5904e66ce9 146 ProDom PD001367 RIBOSOMAL RIBONUCLEOPROTEIN L11 RRNA-BINDING RNA-BINDING METHYLATION 50S L11 BACTERIAL CHLOROPLAST 36 73 7.0E-11 T 22-04-2016 SRM_RS10160 09c6c591a2c8d1afbd74ac5904e66ce9 146 Gene3D G3DSA:3.30.1550.10 5 71 6.6E-36 T 22-04-2016 IPR020784 Ribosomal protein L11, N-terminal SRM_RS10160 09c6c591a2c8d1afbd74ac5904e66ce9 146 PANTHER PTHR11661 1 146 1.9E-56 T 22-04-2016 IPR000911 Ribosomal protein L11/L12 GO:0003735|GO:0005840|GO:0006412 SRM_RS10160 09c6c591a2c8d1afbd74ac5904e66ce9 146 Pfam PF00298 Ribosomal protein L11, RNA binding domain 71 139 8.2E-19 T 22-04-2016 IPR020783 Ribosomal protein L11, C-terminal GO:0003735|GO:0005840|GO:0006412 SRM_RS10160 09c6c591a2c8d1afbd74ac5904e66ce9 146 SUPERFAMILY SSF46906 67 140 7.98E-21 T 22-04-2016 IPR020783 Ribosomal protein L11, C-terminal GO:0003735|GO:0005840|GO:0006412 SRM_RS08550 ee2e9ee3dc9d6eecf5b1887f189f04eb 253 Pfam PF08032 RNA 2'-O ribose methyltransferase substrate binding 9 83 2.0E-14 T 22-04-2016 IPR013123 RNA 2-O ribose methyltransferase, substrate binding GO:0008168 SRM_RS08550 ee2e9ee3dc9d6eecf5b1887f189f04eb 253 Gene3D G3DSA:3.30.1330.30 3 80 3.1E-15 T 22-04-2016 IPR029064 50S ribosomal protein L30e-like SRM_RS08550 ee2e9ee3dc9d6eecf5b1887f189f04eb 253 Gene3D G3DSA:3.40.1280.10 101 252 3.2E-51 T 22-04-2016 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal SRM_RS08550 ee2e9ee3dc9d6eecf5b1887f189f04eb 253 Pfam PF00588 SpoU rRNA Methylase family 106 245 2.2E-36 T 22-04-2016 IPR001537 tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008173 SRM_RS08550 ee2e9ee3dc9d6eecf5b1887f189f04eb 253 SUPERFAMILY SSF55315 4 80 6.83E-13 T 22-04-2016 IPR029064 50S ribosomal protein L30e-like SRM_RS08550 ee2e9ee3dc9d6eecf5b1887f189f04eb 253 SMART SM00967 8 84 1.3E-13 T 22-04-2016 IPR013123 RNA 2-O ribose methyltransferase, substrate binding GO:0008168 SRM_RS08550 ee2e9ee3dc9d6eecf5b1887f189f04eb 253 SUPERFAMILY SSF75217 72 252 7.19E-44 T 22-04-2016 IPR029028 Alpha/beta knot methyltransferases SRM_RS08550 ee2e9ee3dc9d6eecf5b1887f189f04eb 253 TIGRFAM TIGR00186 rRNA_methyl_3: RNA methyltransferase, TrmH family, group 3 7 251 9.9E-58 T 22-04-2016 IPR004441 RNA methyltransferase TrmH family GO:0006396|GO:0008173 SRM_RS10645 97794ec0ddc386f6a379bcc7457c5a16 389 ProSitePatterns PS00595 Aminotransferases class-V pyridoxal-phosphate attachment site. 196 215 - T 22-04-2016 IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site SRM_RS10645 97794ec0ddc386f6a379bcc7457c5a16 389 PIRSF PIRSF005572 1 389 5.4E-119 T 22-04-2016 IPR016454 Cysteine desulfurase KEGG: 00730+2.8.1.7|MetaCyc: PWY-6823|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7250 SRM_RS10645 97794ec0ddc386f6a379bcc7457c5a16 389 Gene3D G3DSA:3.40.640.10 16 249 2.7E-80 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 SRM_RS10645 97794ec0ddc386f6a379bcc7457c5a16 389 PANTHER PTHR11601:SF45 2 389 8.4E-143 T 22-04-2016 SRM_RS10645 97794ec0ddc386f6a379bcc7457c5a16 389 PANTHER PTHR11601 2 389 8.4E-143 T 22-04-2016 SRM_RS10645 97794ec0ddc386f6a379bcc7457c5a16 389 Gene3D G3DSA:3.90.1150.10 250 382 2.3E-35 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 SRM_RS10645 97794ec0ddc386f6a379bcc7457c5a16 389 Pfam PF00266 Aminotransferase class-V 4 375 2.9E-79 T 22-04-2016 IPR000192 Aminotransferase class V domain SRM_RS10645 97794ec0ddc386f6a379bcc7457c5a16 389 SUPERFAMILY SSF53383 3 387 3.82E-98 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase SRM_RS05155 5c7c8fce3b397d2e08cd708557bd0836 327 PANTHER PTHR18964:SF123 1 318 5.1E-72 T 22-04-2016 SRM_RS05155 5c7c8fce3b397d2e08cd708557bd0836 327 Gene3D G3DSA:3.30.420.40 3 144 2.7E-46 T 22-04-2016 SRM_RS05155 5c7c8fce3b397d2e08cd708557bd0836 327 SUPERFAMILY SSF53067 4 318 3.15E-58 T 22-04-2016 SRM_RS05155 5c7c8fce3b397d2e08cd708557bd0836 327 ProSitePatterns PS01125 ROK family signature. 139 166 - T 22-04-2016 IPR000600 ROK family SRM_RS05155 5c7c8fce3b397d2e08cd708557bd0836 327 Gene3D G3DSA:3.30.420.40 145 298 3.9E-43 T 22-04-2016 SRM_RS05155 5c7c8fce3b397d2e08cd708557bd0836 327 PANTHER PTHR18964 1 318 5.1E-72 T 22-04-2016 SRM_RS05155 5c7c8fce3b397d2e08cd708557bd0836 327 Pfam PF00480 ROK family 6 316 1.5E-57 T 22-04-2016 IPR000600 ROK family SRM_RS05780 694965a4cebc2abf1c3c7964412fe838 407 SMART SM01003 35 169 9.5E-48 T 22-04-2016 IPR007886 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, N-terminal SRM_RS05780 694965a4cebc2abf1c3c7964412fe838 407 Gene3D G3DSA:3.40.50.1770 223 389 9.5E-19 T 22-04-2016 SRM_RS05780 694965a4cebc2abf1c3c7964412fe838 407 PANTHER PTHR10160 30 380 2.2E-98 T 22-04-2016 SRM_RS05780 694965a4cebc2abf1c3c7964412fe838 407 SUPERFAMILY SSF52283 33 169 3.15E-43 T 22-04-2016 SRM_RS05780 694965a4cebc2abf1c3c7964412fe838 407 SUPERFAMILY SSF52283 337 393 3.15E-43 T 22-04-2016 SRM_RS05780 694965a4cebc2abf1c3c7964412fe838 407 Pfam PF05222 Alanine dehydrogenase/PNT, N-terminal domain 35 168 3.1E-34 T 22-04-2016 IPR007886 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, N-terminal SRM_RS05780 694965a4cebc2abf1c3c7964412fe838 407 SUPERFAMILY SSF51735 170 335 2.79E-36 T 22-04-2016 IPR016040 NAD(P)-binding domain SRM_RS05780 694965a4cebc2abf1c3c7964412fe838 407 Pfam PF01262 Alanine dehydrogenase/PNT, C-terminal domain 173 385 1.3E-64 T 22-04-2016 IPR007698 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, NAD(H)-binding domain SRM_RS05780 694965a4cebc2abf1c3c7964412fe838 407 SMART SM01002 181 329 3.1E-62 T 22-04-2016 IPR007698 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, NAD(H)-binding domain SRM_RS05780 694965a4cebc2abf1c3c7964412fe838 407 Gene3D G3DSA:3.40.50.1770 33 220 4.0E-48 T 22-04-2016 SRM_RS06670 d782ea13a501c0fae63ea787944c5d40 186 TIGRFAM TIGR00401 msrA: peptide-methionine (S)-S-oxide reductase 6 155 4.7E-60 T 22-04-2016 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 SRM_RS06670 d782ea13a501c0fae63ea787944c5d40 186 Pfam PF01625 Peptide methionine sulfoxide reductase 7 159 2.3E-62 T 22-04-2016 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 SRM_RS06670 d782ea13a501c0fae63ea787944c5d40 186 SUPERFAMILY SSF55068 3 170 1.83E-72 T 22-04-2016 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 SRM_RS06670 d782ea13a501c0fae63ea787944c5d40 186 Gene3D G3DSA:3.30.1060.10 3 158 2.3E-71 T 22-04-2016 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 SRM_RS06670 d782ea13a501c0fae63ea787944c5d40 186 PANTHER PTHR10173 7 159 3.1E-83 T 22-04-2016 IPR028427 Peptide methionine sulfoxide reductase GO:0006979|GO:0016671|GO:0030091 SRM_RS06670 d782ea13a501c0fae63ea787944c5d40 186 Hamap MF_01401 Peptide methionine sulfoxide reductase MsrA [msrA]. 4 163 36.769 T 22-04-2016 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 SRM_RS06670 d782ea13a501c0fae63ea787944c5d40 186 PANTHER PTHR10173:SF34 7 159 3.1E-83 T 22-04-2016 SRM_RS04190 f899df8ba91ccd8979b5041d3dc22b49 82 SUPERFAMILY SSF47598 1 44 2.62E-10 T 22-04-2016 IPR010985 Ribbon-helix-helix GO:0006355 SRM_RS04190 f899df8ba91ccd8979b5041d3dc22b49 82 Gene3D G3DSA:1.10.1220.10 5 43 2.3E-9 T 22-04-2016 IPR013321 Arc-type ribbon-helix-helix GO:0006355 SRM_RS04190 f899df8ba91ccd8979b5041d3dc22b49 82 Pfam PF07878 CopG-like RHH_1 or ribbon-helix-helix domain, RHH_5 10 42 1.5E-7 T 22-04-2016 IPR012869 CopG-like ribbon-helix-helix domain SRM_RS14160 313aad976930b9977dadabc01d6bc7ce 334 Hamap MF_01445 tRNA N6-adenosine threonylcarbamoyltransferase [tsaD]. 1 334 57.711 T 22-04-2016 IPR022450 tRNA N6-adenosine threonylcarbamoyltransferase, TsaD GO:0002949|GO:0004222 KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 SRM_RS14160 313aad976930b9977dadabc01d6bc7ce 334 PANTHER PTHR11735:SF6 1 330 5.2E-126 T 22-04-2016 SRM_RS14160 313aad976930b9977dadabc01d6bc7ce 334 ProSitePatterns PS01016 Glycoprotease family signature. 95 115 - T 22-04-2016 IPR017860 Peptidase M22, conserved site KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 SRM_RS14160 313aad976930b9977dadabc01d6bc7ce 334 Gene3D G3DSA:3.30.420.40 1 149 1.3E-44 T 22-04-2016 SRM_RS14160 313aad976930b9977dadabc01d6bc7ce 334 SUPERFAMILY SSF53067 1 313 2.16E-35 T 22-04-2016 SRM_RS14160 313aad976930b9977dadabc01d6bc7ce 334 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 153 174 1.2E-45 T 22-04-2016 IPR017861 Kae1/TsaD family KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 SRM_RS14160 313aad976930b9977dadabc01d6bc7ce 334 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 96 115 1.2E-45 T 22-04-2016 IPR017861 Kae1/TsaD family KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 SRM_RS14160 313aad976930b9977dadabc01d6bc7ce 334 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 266 275 1.2E-45 T 22-04-2016 IPR017861 Kae1/TsaD family KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 SRM_RS14160 313aad976930b9977dadabc01d6bc7ce 334 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 130 142 1.2E-45 T 22-04-2016 IPR017861 Kae1/TsaD family KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 SRM_RS14160 313aad976930b9977dadabc01d6bc7ce 334 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 4 17 1.2E-45 T 22-04-2016 IPR017861 Kae1/TsaD family KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 SRM_RS14160 313aad976930b9977dadabc01d6bc7ce 334 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 75 95 1.2E-45 T 22-04-2016 IPR017861 Kae1/TsaD family KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 SRM_RS14160 313aad976930b9977dadabc01d6bc7ce 334 TIGRFAM TIGR00329 gcp_kae1: metallohydrolase, glycoprotease/Kae1 family 4 309 2.4E-98 T 22-04-2016 IPR017861 Kae1/TsaD family KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 SRM_RS14160 313aad976930b9977dadabc01d6bc7ce 334 Pfam PF00814 Glycoprotease family 23 309 8.7E-94 T 22-04-2016 IPR000905 Gcp-like domain KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 SRM_RS14160 313aad976930b9977dadabc01d6bc7ce 334 PANTHER PTHR11735 1 330 5.2E-126 T 22-04-2016 SRM_RS14160 313aad976930b9977dadabc01d6bc7ce 334 TIGRFAM TIGR03723 T6A_TsaD_YgjD: tRNA threonylcarbamoyl adenosine modification protein TsaD 3 316 1.3E-118 T 22-04-2016 IPR022450 tRNA N6-adenosine threonylcarbamoyltransferase, TsaD GO:0002949|GO:0004222 KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 SRM_RS09230 6b3666d50065b1a9525c368f32352504 230 SUPERFAMILY SSF49503 174 224 1.68E-16 T 22-04-2016 IPR008972 Cupredoxin SRM_RS09230 6b3666d50065b1a9525c368f32352504 230 SUPERFAMILY SSF49503 80 133 1.68E-16 T 22-04-2016 IPR008972 Cupredoxin SRM_RS09230 6b3666d50065b1a9525c368f32352504 230 Pfam PF13473 Cupredoxin-like domain 83 130 1.1E-9 T 22-04-2016 IPR028096 EfeO-type cupredoxin-like domain SRM_RS09230 6b3666d50065b1a9525c368f32352504 230 Gene3D G3DSA:2.60.40.420 83 226 4.8E-29 T 22-04-2016 IPR008972 Cupredoxin SRM_RS07655 10fbaecf35a1ee0c2585ed55e367c6ec 137 SUPERFAMILY SSF46785 3 132 8.4E-23 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SRM_RS07655 10fbaecf35a1ee0c2585ed55e367c6ec 137 Gene3D G3DSA:1.10.10.10 4 134 5.0E-23 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SRM_RS07655 10fbaecf35a1ee0c2585ed55e367c6ec 137 Pfam PF12802 MarR family 23 82 1.1E-7 T 22-04-2016 SRM_RS07655 10fbaecf35a1ee0c2585ed55e367c6ec 137 SMART SM00347 17 122 3.6E-8 T 22-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 SRM_RS01760 8cc7dfa295ffebd8ef14b9d96e2f8a28 194 Gene3D G3DSA:1.10.10.10 119 184 5.5E-20 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SRM_RS01760 8cc7dfa295ffebd8ef14b9d96e2f8a28 194 PANTHER PTHR30173 8 191 1.7E-44 T 22-04-2016 SRM_RS01760 8cc7dfa295ffebd8ef14b9d96e2f8a28 194 Gene3D G3DSA:1.10.1740.10 7 117 1.9E-26 T 22-04-2016 SRM_RS01760 8cc7dfa295ffebd8ef14b9d96e2f8a28 194 SUPERFAMILY SSF88659 111 183 1.94E-17 T 22-04-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 SRM_RS01760 8cc7dfa295ffebd8ef14b9d96e2f8a28 194 TIGRFAM TIGR02985 Sig70_bacteroi1: RNA polymerase sigma-70 factor, Bacteroides expansion family 1 20 178 3.3E-39 T 22-04-2016 IPR014327 RNA polymerase sigma-70, Bacteroidetes type SRM_RS01760 8cc7dfa295ffebd8ef14b9d96e2f8a28 194 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 20 179 3.5E-34 T 22-04-2016 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 SRM_RS01760 8cc7dfa295ffebd8ef14b9d96e2f8a28 194 SUPERFAMILY SSF88946 2 99 8.04E-26 T 22-04-2016 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 SRM_RS01760 8cc7dfa295ffebd8ef14b9d96e2f8a28 194 Pfam PF04542 Sigma-70 region 2 25 91 2.4E-17 T 22-04-2016 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 SRM_RS01760 8cc7dfa295ffebd8ef14b9d96e2f8a28 194 Pfam PF08281 Sigma-70, region 4 127 177 6.1E-17 T 22-04-2016 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 SRM_RS02675 0c418f0de6e93c542a56cd43ac6f3c08 327 PANTHER PTHR22604 3 326 9.9E-91 T 22-04-2016 SRM_RS02675 0c418f0de6e93c542a56cd43ac6f3c08 327 Pfam PF01408 Oxidoreductase family, NAD-binding Rossmann fold 3 119 2.1E-22 T 22-04-2016 IPR000683 Oxidoreductase, N-terminal GO:0016491 SRM_RS02675 0c418f0de6e93c542a56cd43ac6f3c08 327 PANTHER PTHR22604:SF105 3 326 9.9E-91 T 22-04-2016 SRM_RS02675 0c418f0de6e93c542a56cd43ac6f3c08 327 Gene3D G3DSA:3.40.50.720 3 144 5.2E-43 T 22-04-2016 IPR016040 NAD(P)-binding domain SRM_RS02675 0c418f0de6e93c542a56cd43ac6f3c08 327 SUPERFAMILY SSF55347 127 291 1.11E-36 T 22-04-2016 SRM_RS02675 0c418f0de6e93c542a56cd43ac6f3c08 327 Gene3D G3DSA:3.30.360.10 145 326 5.0E-53 T 22-04-2016 SRM_RS02675 0c418f0de6e93c542a56cd43ac6f3c08 327 SUPERFAMILY SSF51735 3 153 3.14E-45 T 22-04-2016 IPR016040 NAD(P)-binding domain SRM_RS07110 d827f428755ab2074c02e2ade3c49b7c 483 PANTHER PTHR11455:SF22 3 481 9.0E-225 T 22-04-2016 IPR014133 Cryptochrome DASH GO:0003913|GO:0006281 SRM_RS07110 d827f428755ab2074c02e2ade3c49b7c 483 TIGRFAM TIGR02765 crypto_DASH: cryptochrome, DASH family 4 434 3.5E-172 T 22-04-2016 IPR014133 Cryptochrome DASH GO:0003913|GO:0006281 SRM_RS07110 d827f428755ab2074c02e2ade3c49b7c 483 Pfam PF03441 FAD binding domain of DNA photolyase 289 479 9.9E-59 T 22-04-2016 IPR005101 Cryptochrome/DNA photolyase, FAD-binding domain SRM_RS07110 d827f428755ab2074c02e2ade3c49b7c 483 Gene3D G3DSA:1.10.579.10 297 479 1.0E-67 T 22-04-2016 SRM_RS07110 d827f428755ab2074c02e2ade3c49b7c 483 PRINTS PR00147 DNA photolyase signature 335 351 8.1E-11 T 22-04-2016 IPR002081 Cryptochrome/DNA photolyase class 1 SRM_RS07110 d827f428755ab2074c02e2ade3c49b7c 483 PRINTS PR00147 DNA photolyase signature 394 408 8.1E-11 T 22-04-2016 IPR002081 Cryptochrome/DNA photolyase class 1 SRM_RS07110 d827f428755ab2074c02e2ade3c49b7c 483 PRINTS PR00147 DNA photolyase signature 355 373 8.1E-11 T 22-04-2016 IPR002081 Cryptochrome/DNA photolyase class 1 SRM_RS07110 d827f428755ab2074c02e2ade3c49b7c 483 SUPERFAMILY SSF48173 207 479 4.71E-90 T 22-04-2016 IPR005101 Cryptochrome/DNA photolyase, FAD-binding domain SRM_RS07110 d827f428755ab2074c02e2ade3c49b7c 483 PANTHER PTHR11455 3 481 9.0E-225 T 22-04-2016 SRM_RS07110 d827f428755ab2074c02e2ade3c49b7c 483 SUPERFAMILY SSF52425 4 193 5.1E-50 T 22-04-2016 IPR006050 DNA photolyase, N-terminal SRM_RS07110 d827f428755ab2074c02e2ade3c49b7c 483 Pfam PF00875 DNA photolyase 5 170 5.2E-43 T 22-04-2016 IPR006050 DNA photolyase, N-terminal SRM_RS07110 d827f428755ab2074c02e2ade3c49b7c 483 Gene3D G3DSA:3.40.50.620 3 127 5.9E-37 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold SRM_RS07110 d827f428755ab2074c02e2ade3c49b7c 483 Gene3D G3DSA:1.25.40.80 135 296 6.6E-54 T 22-04-2016 SRM_RS05030 dc6524e65bceb020274cb193a8c5fcf5 312 PANTHER PTHR10584 3 301 2.1E-47 T 22-04-2016 SRM_RS05030 dc6524e65bceb020274cb193a8c5fcf5 312 ProSitePatterns PS00584 pfkB family of carbohydrate kinases signature 2. 230 243 - T 22-04-2016 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 SRM_RS05030 dc6524e65bceb020274cb193a8c5fcf5 312 SUPERFAMILY SSF53613 2 282 3.43E-53 T 22-04-2016 IPR029056 Ribokinase-like SRM_RS05030 dc6524e65bceb020274cb193a8c5fcf5 312 PANTHER PTHR10584:SF179 3 301 2.1E-47 T 22-04-2016 SRM_RS05030 dc6524e65bceb020274cb193a8c5fcf5 312 Gene3D G3DSA:3.40.1190.20 2 292 5.6E-50 T 22-04-2016 IPR029056 Ribokinase-like SRM_RS05030 dc6524e65bceb020274cb193a8c5fcf5 312 Pfam PF00294 pfkB family carbohydrate kinase 25 278 5.5E-27 T 22-04-2016 IPR011611 Carbohydrate kinase PfkB SRM_RS05785 138d879752d82beff73e8a66dbbf47cb 306 PANTHER PTHR40459:SF1 12 306 1.6E-50 T 22-04-2016 SRM_RS05785 138d879752d82beff73e8a66dbbf47cb 306 SUPERFAMILY SSF48179 174 278 2.04E-20 T 22-04-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 SRM_RS05785 138d879752d82beff73e8a66dbbf47cb 306 PANTHER PTHR40459 12 306 1.6E-50 T 22-04-2016 SRM_RS05785 138d879752d82beff73e8a66dbbf47cb 306 Pfam PF10727 Rossmann-like domain 11 125 2.1E-15 T 22-04-2016 IPR019665 Putative oxidoreductase/dehydrogenase, Rossmann-like domain SRM_RS05785 138d879752d82beff73e8a66dbbf47cb 306 Pfam PF10728 Domain of unknown function (DUF2520) 141 271 8.1E-32 T 22-04-2016 IPR018931 Domain of unknown function DUF2520 SRM_RS05785 138d879752d82beff73e8a66dbbf47cb 306 SUPERFAMILY SSF51735 11 172 1.48E-29 T 22-04-2016 IPR016040 NAD(P)-binding domain SRM_RS05785 138d879752d82beff73e8a66dbbf47cb 306 Gene3D G3DSA:3.40.50.720 11 170 3.7E-38 T 22-04-2016 IPR016040 NAD(P)-binding domain SRM_RS05785 138d879752d82beff73e8a66dbbf47cb 306 Gene3D G3DSA:1.10.1040.20 174 276 1.8E-25 T 22-04-2016 IPR018931 Domain of unknown function DUF2520 SRM_RS10635 bc7597bb95a1fa53bf3c8a0397327992 343 Hamap MF_01855 Fructose-1,6-bisphosphatase class 1 [fbp]. 5 335 40.95 T 22-04-2016 IPR000146 Fructose-1,6-bisphosphatase class 1 GO:0005975|GO:0042132|GO:0042578 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: REACT_474|UniPathway: UPA00138 SRM_RS10635 bc7597bb95a1fa53bf3c8a0397327992 343 Pfam PF00316 Fructose-1-6-bisphosphatase, N-terminal domain 6 198 7.1E-67 T 22-04-2016 IPR033391 Fructose-1-6-bisphosphatase class I, N-terminal KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|UniPathway: UPA00138 SRM_RS10635 bc7597bb95a1fa53bf3c8a0397327992 343 PANTHER PTHR11556 4 340 1.4E-160 T 22-04-2016 IPR000146 Fructose-1,6-bisphosphatase class 1 GO:0005975|GO:0042132|GO:0042578 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: REACT_474|UniPathway: UPA00138 SRM_RS10635 bc7597bb95a1fa53bf3c8a0397327992 343 PIRSF PIRSF000904 3 339 2.1E-115 T 22-04-2016 IPR000146 Fructose-1,6-bisphosphatase class 1 GO:0005975|GO:0042132|GO:0042578 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: REACT_474|UniPathway: UPA00138 SRM_RS10635 bc7597bb95a1fa53bf3c8a0397327992 343 PIRSF PIRSF500210 3 338 8.0E-118 T 22-04-2016 IPR028343 Fructose-1,6-bisphosphatase KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|UniPathway: UPA00138 SRM_RS10635 bc7597bb95a1fa53bf3c8a0397327992 343 SUPERFAMILY SSF56655 4 333 2.11E-105 T 22-04-2016 SRM_RS10635 bc7597bb95a1fa53bf3c8a0397327992 343 PRINTS PR00115 Fructose-1,6-bisphosphatase signature 210 237 1.3E-60 T 22-04-2016 IPR028343 Fructose-1,6-bisphosphatase KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|UniPathway: UPA00138 SRM_RS10635 bc7597bb95a1fa53bf3c8a0397327992 343 PRINTS PR00115 Fructose-1,6-bisphosphatase signature 309 334 1.3E-60 T 22-04-2016 IPR028343 Fructose-1,6-bisphosphatase KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|UniPathway: UPA00138 SRM_RS10635 bc7597bb95a1fa53bf3c8a0397327992 343 PRINTS PR00115 Fructose-1,6-bisphosphatase signature 67 93 1.3E-60 T 22-04-2016 IPR028343 Fructose-1,6-bisphosphatase KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|UniPathway: UPA00138 SRM_RS10635 bc7597bb95a1fa53bf3c8a0397327992 343 PRINTS PR00115 Fructose-1,6-bisphosphatase signature 153 176 1.3E-60 T 22-04-2016 IPR028343 Fructose-1,6-bisphosphatase KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|UniPathway: UPA00138 SRM_RS10635 bc7597bb95a1fa53bf3c8a0397327992 343 PRINTS PR00115 Fructose-1,6-bisphosphatase signature 30 57 1.3E-60 T 22-04-2016 IPR028343 Fructose-1,6-bisphosphatase KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|UniPathway: UPA00138 SRM_RS10635 bc7597bb95a1fa53bf3c8a0397327992 343 PRINTS PR00115 Fructose-1,6-bisphosphatase signature 184 207 1.3E-60 T 22-04-2016 IPR028343 Fructose-1,6-bisphosphatase KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|UniPathway: UPA00138 SRM_RS10635 bc7597bb95a1fa53bf3c8a0397327992 343 Gene3D G3DSA:3.40.190.80 201 334 5.1E-51 T 22-04-2016 SRM_RS10635 bc7597bb95a1fa53bf3c8a0397327992 343 Gene3D G3DSA:3.30.540.10 6 200 5.4E-71 T 22-04-2016 SRM_RS02605 4c1a3acf7f368cb2f430413d6fc9298b 207 Gene3D G3DSA:3.60.21.10 2 194 2.1E-27 T 22-04-2016 IPR029052 Metallo-dependent phosphatase-like SRM_RS02605 4c1a3acf7f368cb2f430413d6fc9298b 207 SUPERFAMILY SSF56300 1 195 8.86E-43 T 22-04-2016 IPR029052 Metallo-dependent phosphatase-like SRM_RS02605 4c1a3acf7f368cb2f430413d6fc9298b 207 Pfam PF12850 Calcineurin-like phosphoesterase superfamily domain 1 177 2.7E-12 T 22-04-2016 IPR024654 Calcineurin-like phosphoesterase domain, lpxH type SRM_RS02605 4c1a3acf7f368cb2f430413d6fc9298b 207 PANTHER PTHR12905 1 193 1.5E-16 T 22-04-2016 SRM_RS14845 2f115ec9e3d5f575305f7c3c7c8a3aaf 254 PANTHER PTHR24322 160 192 2.6E-45 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SRM_RS14845 2f115ec9e3d5f575305f7c3c7c8a3aaf 254 PANTHER PTHR24322 12 143 2.6E-45 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SRM_RS14845 2f115ec9e3d5f575305f7c3c7c8a3aaf 254 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 160 179 1.3E-35 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SRM_RS14845 2f115ec9e3d5f575305f7c3c7c8a3aaf 254 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 215 235 1.3E-35 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SRM_RS14845 2f115ec9e3d5f575305f7c3c7c8a3aaf 254 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 133 149 1.3E-35 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SRM_RS14845 2f115ec9e3d5f575305f7c3c7c8a3aaf 254 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 181 198 1.3E-35 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SRM_RS14845 2f115ec9e3d5f575305f7c3c7c8a3aaf 254 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 9 26 1.3E-35 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SRM_RS14845 2f115ec9e3d5f575305f7c3c7c8a3aaf 254 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 81 92 1.3E-35 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SRM_RS14845 2f115ec9e3d5f575305f7c3c7c8a3aaf 254 Gene3D G3DSA:3.40.50.720 1 252 1.6E-70 T 22-04-2016 IPR016040 NAD(P)-binding domain SRM_RS14845 2f115ec9e3d5f575305f7c3c7c8a3aaf 254 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 160 179 8.3E-11 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SRM_RS14845 2f115ec9e3d5f575305f7c3c7c8a3aaf 254 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 81 92 8.3E-11 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SRM_RS14845 2f115ec9e3d5f575305f7c3c7c8a3aaf 254 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 139 147 8.3E-11 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SRM_RS14845 2f115ec9e3d5f575305f7c3c7c8a3aaf 254 SUPERFAMILY SSF51735 1 253 3.44E-66 T 22-04-2016 IPR016040 NAD(P)-binding domain SRM_RS14845 2f115ec9e3d5f575305f7c3c7c8a3aaf 254 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 14 250 9.6E-50 T 22-04-2016 SRM_RS06055 b2676a60ee25d278473dbbcd78434d07 184 Gene3D G3DSA:3.30.70.560 3 159 2.8E-48 T 22-04-2016 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|UniPathway: UPA00077 SRM_RS06055 b2676a60ee25d278473dbbcd78434d07 184 Pfam PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) 5 138 1.1E-34 T 22-04-2016 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|UniPathway: UPA00077 SRM_RS06055 b2676a60ee25d278473dbbcd78434d07 184 ProSitePatterns PS00794 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase signature. 93 104 - T 22-04-2016 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|UniPathway: UPA00077 SRM_RS06055 b2676a60ee25d278473dbbcd78434d07 184 PANTHER PTHR20941 4 159 3.1E-50 T 22-04-2016 SRM_RS06055 b2676a60ee25d278473dbbcd78434d07 184 SUPERFAMILY SSF55083 3 159 9.29E-44 T 22-04-2016 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|UniPathway: UPA00077 SRM_RS06055 b2676a60ee25d278473dbbcd78434d07 184 TIGRFAM TIGR01498 folK: 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase 4 138 7.4E-34 T 22-04-2016 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|UniPathway: UPA00077 SRM_RS06055 b2676a60ee25d278473dbbcd78434d07 184 PANTHER PTHR20941:SF10 4 159 3.1E-50 T 22-04-2016 SRM_RS06270 d5ead3b01c053129134ff102a59df3c9 297 Gene3D G3DSA:3.40.50.150 81 270 2.0E-40 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SRM_RS06270 d5ead3b01c053129134ff102a59df3c9 297 Pfam PF13489 Methyltransferase domain 83 240 9.7E-28 T 22-04-2016 SRM_RS06270 d5ead3b01c053129134ff102a59df3c9 297 SUPERFAMILY SSF53335 86 264 9.38E-38 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SRM_RS06270 d5ead3b01c053129134ff102a59df3c9 297 PANTHER PTHR10108 60 256 2.3E-22 T 22-04-2016 SRM_RS06270 d5ead3b01c053129134ff102a59df3c9 297 PANTHER PTHR10108:SF779 60 256 2.3E-22 T 22-04-2016 SRM_RS14135 91b69b67053a8cf968f24dad11e31032 403 Pfam PF12412 Protein of unknown function (DUF3667) 134 178 2.0E-15 T 22-04-2016 IPR022134 Protein of unknown function DUF3667 SRM_RS13270 851906d2f2ca3cb18bf60f59f5f204bc 260 PANTHER PTHR30294:SF13 9 216 7.6E-56 T 22-04-2016 SRM_RS13270 851906d2f2ca3cb18bf60f59f5f204bc 260 PANTHER PTHR30294 9 216 7.6E-56 T 22-04-2016 SRM_RS13270 851906d2f2ca3cb18bf60f59f5f204bc 260 PRINTS PR00164 ABC-2 type transport system membrane protein signature 139 163 1.1E-10 T 22-04-2016 IPR000412 ABC-2 transporter GO:0006810|GO:0016020 SRM_RS13270 851906d2f2ca3cb18bf60f59f5f204bc 260 PRINTS PR00164 ABC-2 type transport system membrane protein signature 105 130 1.1E-10 T 22-04-2016 IPR000412 ABC-2 transporter GO:0006810|GO:0016020 SRM_RS13270 851906d2f2ca3cb18bf60f59f5f204bc 260 PRINTS PR00164 ABC-2 type transport system membrane protein signature 25 46 1.1E-10 T 22-04-2016 IPR000412 ABC-2 transporter GO:0006810|GO:0016020 SRM_RS13270 851906d2f2ca3cb18bf60f59f5f204bc 260 PRINTS PR00164 ABC-2 type transport system membrane protein signature 176 195 1.1E-10 T 22-04-2016 IPR000412 ABC-2 transporter GO:0006810|GO:0016020 SRM_RS13270 851906d2f2ca3cb18bf60f59f5f204bc 260 PIRSF PIRSF006648 1 257 1.3E-48 T 22-04-2016 IPR000412 ABC-2 transporter GO:0006810|GO:0016020 SRM_RS13270 851906d2f2ca3cb18bf60f59f5f204bc 260 Pfam PF01061 ABC-2 type transporter 7 218 1.7E-32 T 22-04-2016 IPR013525 ABC-2 type transporter GO:0016020 SRM_RS03640 ee21fa6315daad68775d97780311f708 395 PANTHER PTHR30405 5 370 7.0E-106 T 22-04-2016 SRM_RS03640 ee21fa6315daad68775d97780311f708 395 Pfam PF07282 Putative transposase DNA-binding domain 301 369 5.9E-21 T 22-04-2016 IPR010095 Transposase IS605, OrfB, C-terminal SRM_RS03640 ee21fa6315daad68775d97780311f708 395 TIGRFAM TIGR01766 tspaseT_teng_C: transposase, IS605 OrfB family 255 328 4.1E-14 T 22-04-2016 IPR010095 Transposase IS605, OrfB, C-terminal SRM_RS03640 ee21fa6315daad68775d97780311f708 395 Pfam PF12323 Helix-turn-helix domain 1 48 6.7E-21 T 22-04-2016 IPR021027 Transposase, putative, helix-turn-helix domain SRM_RS03640 ee21fa6315daad68775d97780311f708 395 PANTHER PTHR30405:SF5 5 370 7.0E-106 T 22-04-2016 SRM_RS03640 ee21fa6315daad68775d97780311f708 395 Pfam PF01385 Probable transposase 190 287 1.1E-27 T 22-04-2016 IPR001959 Probable transposase, IS891/IS1136/IS1341 SRM_RS09100 451fc9dbab9fd50ece183d385816bd75 213 SUPERFAMILY SSF89392 28 210 9.02E-24 T 22-04-2016 IPR029046 Lipoprotein localisation LolA/LolB/LppX SRM_RS09100 451fc9dbab9fd50ece183d385816bd75 213 Gene3D G3DSA:2.50.20.10 28 208 7.7E-29 T 22-04-2016 SRM_RS09100 451fc9dbab9fd50ece183d385816bd75 213 Pfam PF03548 Outer membrane lipoprotein carrier protein LolA 38 198 1.3E-12 T 22-04-2016 IPR004564 Outer membrane lipoprotein carrier protein LolA-like SRM_RS09100 451fc9dbab9fd50ece183d385816bd75 213 PANTHER PTHR35869 28 213 6.5E-17 T 22-04-2016 SRM_RS13210 c297310134dbdd8f9159b9147dd20f5a 177 Pfam PF00011 Hsp20/alpha crystallin family 78 177 1.4E-29 T 22-04-2016 IPR002068 Alpha crystallin/Hsp20 domain SRM_RS13210 c297310134dbdd8f9159b9147dd20f5a 177 PANTHER PTHR11527 23 177 2.7E-38 T 22-04-2016 IPR031107 Small heat shock protein HSP20 SRM_RS13210 c297310134dbdd8f9159b9147dd20f5a 177 PANTHER PTHR11527:SF134 23 177 2.7E-38 T 22-04-2016 SRM_RS13210 c297310134dbdd8f9159b9147dd20f5a 177 SUPERFAMILY SSF49764 60 176 4.53E-40 T 22-04-2016 IPR008978 HSP20-like chaperone SRM_RS13210 c297310134dbdd8f9159b9147dd20f5a 177 Gene3D G3DSA:2.60.40.790 38 177 8.3E-46 T 22-04-2016 IPR008978 HSP20-like chaperone SRM_RS14245 bfb1612603f8bdb3bce397637ecab61c 216 Pfam PF03458 UPF0126 domain 103 175 1.7E-20 T 22-04-2016 IPR005115 Uncharacterised domain UPF0126 SRM_RS14245 bfb1612603f8bdb3bce397637ecab61c 216 Pfam PF03458 UPF0126 domain 17 89 3.2E-22 T 22-04-2016 IPR005115 Uncharacterised domain UPF0126 SRM_RS15045 cb7894aa67757eace93125941fce5e11 176 Pfam PF13211 Protein of unknown function (DUF4019) 68 169 6.9E-31 T 22-04-2016 IPR025091 Protein of unknown function DUF4019 SRM_RS03510 d02da96232fcfde4f022fc0009b9f627 230 Pfam PF01694 Rhomboid family 61 215 2.9E-29 T 22-04-2016 IPR022764 Peptidase S54, rhomboid domain GO:0004252|GO:0016021 SRM_RS03510 d02da96232fcfde4f022fc0009b9f627 230 Gene3D G3DSA:1.20.1540.10 24 215 4.6E-38 T 22-04-2016 IPR022764 Peptidase S54, rhomboid domain GO:0004252|GO:0016021 SRM_RS03510 d02da96232fcfde4f022fc0009b9f627 230 PANTHER PTHR22936 26 216 2.6E-26 T 22-04-2016 IPR002610 Peptidase S54, rhomboid GO:0004252|GO:0006508|GO:0016021 SRM_RS03510 d02da96232fcfde4f022fc0009b9f627 230 SUPERFAMILY SSF144091 24 216 2.75E-36 T 22-04-2016 SRM_RS01230 3e9a2cc48eec340f8384a1979d675f58 296 Pfam PF13557 Putative MetA-pathway of phenol degradation 83 262 3.0E-6 T 22-04-2016 IPR025737 MetA-pathway of phenol degradation, putative SRM_RS08440 92093a9a4da824d67d76c2aef40ebfc3 233 ProSitePatterns PS00382 Endopeptidase Clp histidine active site. 130 143 - T 22-04-2016 IPR033135 ClpP, histidine active site SRM_RS08440 92093a9a4da824d67d76c2aef40ebfc3 233 Gene3D G3DSA:3.90.226.10 21 209 1.5E-79 T 22-04-2016 IPR029045 ClpP/crotonase-like domain SRM_RS08440 92093a9a4da824d67d76c2aef40ebfc3 233 ProSitePatterns PS00381 Endopeptidase Clp serine active site. 108 119 - T 22-04-2016 IPR018215 ClpP, Ser active site SRM_RS08440 92093a9a4da824d67d76c2aef40ebfc3 233 PANTHER PTHR10381 21 211 2.1E-116 T 22-04-2016 IPR023562 Clp protease proteolytic subunit /Translocation-enhancing protein TepA SRM_RS08440 92093a9a4da824d67d76c2aef40ebfc3 233 SUPERFAMILY SSF52096 29 211 6.7E-67 T 22-04-2016 IPR029045 ClpP/crotonase-like domain SRM_RS08440 92093a9a4da824d67d76c2aef40ebfc3 233 Pfam PF00574 Clp protease 31 210 1.2E-77 T 22-04-2016 IPR023562 Clp protease proteolytic subunit /Translocation-enhancing protein TepA SRM_RS08440 92093a9a4da824d67d76c2aef40ebfc3 233 PRINTS PR00127 Clp protease catalytic subunit P signature 129 148 4.4E-47 T 22-04-2016 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 SRM_RS08440 92093a9a4da824d67d76c2aef40ebfc3 233 PRINTS PR00127 Clp protease catalytic subunit P signature 37 52 4.4E-47 T 22-04-2016 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 SRM_RS08440 92093a9a4da824d67d76c2aef40ebfc3 233 PRINTS PR00127 Clp protease catalytic subunit P signature 77 97 4.4E-47 T 22-04-2016 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 SRM_RS08440 92093a9a4da824d67d76c2aef40ebfc3 233 PRINTS PR00127 Clp protease catalytic subunit P signature 186 205 4.4E-47 T 22-04-2016 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 SRM_RS08440 92093a9a4da824d67d76c2aef40ebfc3 233 PRINTS PR00127 Clp protease catalytic subunit P signature 108 125 4.4E-47 T 22-04-2016 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 SRM_RS08440 92093a9a4da824d67d76c2aef40ebfc3 233 Hamap MF_00444 ATP-dependent Clp protease proteolytic subunit [clpP]. 21 211 41.218 T 22-04-2016 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 SRM_RS04575 d166071c718f8a0f1bf0afe08061c29b 120 Hamap MF_00236 Sec-independent protein translocase protein TatA [tatA]. 1 84 20.846 T 22-04-2016 IPR006312 Sec-independent protein translocase protein TatA/E GO:0005886|GO:0008565|GO:0009306|GO:0015031|GO:0016021 SRM_RS04575 d166071c718f8a0f1bf0afe08061c29b 120 TIGRFAM TIGR01411 tatAE: twin arginine-targeting protein translocase, TatA/E family 3 48 5.5E-19 T 22-04-2016 IPR006312 Sec-independent protein translocase protein TatA/E GO:0005886|GO:0008565|GO:0009306|GO:0015031|GO:0016021 SRM_RS04575 d166071c718f8a0f1bf0afe08061c29b 120 Pfam PF02416 mttA/Hcf106 family 4 53 3.1E-20 T 22-04-2016 IPR003369 Sec-independent protein translocase protein TatA/B/E GO:0008565|GO:0015031 SRM_RS04575 d166071c718f8a0f1bf0afe08061c29b 120 PANTHER PTHR33162 1 53 5.5E-18 T 22-04-2016 SRM_RS04575 d166071c718f8a0f1bf0afe08061c29b 120 PRINTS PR01506 Bacterial sec-independent translocation TatB protein signature 21 40 4.682869E-9 T 22-04-2016 IPR003998 Twin-arginine translocation protein TatB-like GO:0009306|GO:0016020 SRM_RS04575 d166071c718f8a0f1bf0afe08061c29b 120 PRINTS PR01506 Bacterial sec-independent translocation TatB protein signature 40 58 4.682869E-9 T 22-04-2016 IPR003998 Twin-arginine translocation protein TatB-like GO:0009306|GO:0016020 SRM_RS04575 d166071c718f8a0f1bf0afe08061c29b 120 PRINTS PR01506 Bacterial sec-independent translocation TatB protein signature 1 21 4.682869E-9 T 22-04-2016 IPR003998 Twin-arginine translocation protein TatB-like GO:0009306|GO:0016020 SRM_RS03915 5264111e607b815f7eaa535b89d053e4 186 PANTHER PTHR21047 5 183 2.4E-66 T 22-04-2016 IPR000888 dTDP-4-dehydrorhamnose 3,5-epimerase-related GO:0008830 SRM_RS03915 5264111e607b815f7eaa535b89d053e4 186 ProDom PD001462 35-EPIMERASE DTDP-4-DEHYDRORHAMNOSE ISOMERASE RMLC EPIMERASE RELATED DTDP-6-DEOXY-D-GLUCOSE-35-EPIMERASE DTDP-4-KETO-6-DEOXY-D-GLUCOSE DTDP-4-KETO-6-DEOXYGLUCOSE-35-EPIMERASE DTDP-L-RHAMNOSE 1 176 2.0E-57 T 22-04-2016 IPR000888 dTDP-4-dehydrorhamnose 3,5-epimerase-related GO:0008830 SRM_RS03915 5264111e607b815f7eaa535b89d053e4 186 Pfam PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase 5 173 4.4E-66 T 22-04-2016 IPR000888 dTDP-4-dehydrorhamnose 3,5-epimerase-related GO:0008830 SRM_RS03915 5264111e607b815f7eaa535b89d053e4 186 SUPERFAMILY SSF51182 1 176 9.21E-70 T 22-04-2016 IPR011051 RmlC-like cupin domain SRM_RS03915 5264111e607b815f7eaa535b89d053e4 186 Gene3D G3DSA:2.60.120.10 1 177 2.9E-72 T 22-04-2016 IPR014710 RmlC-like jelly roll fold SRM_RS03915 5264111e607b815f7eaa535b89d053e4 186 TIGRFAM TIGR01221 rmlC: dTDP-4-dehydrorhamnose 3,5-epimerase 3 175 1.4E-67 T 22-04-2016 IPR000888 dTDP-4-dehydrorhamnose 3,5-epimerase-related GO:0008830 SRM_RS14945 9ce23781670e359e2d73113f265066a7 221 Gene3D G3DSA:3.40.50.300 2 205 9.2E-66 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SRM_RS14945 9ce23781670e359e2d73113f265066a7 221 Hamap MF_00165 Thymidylate kinase [tmk]. 2 205 28.145 T 22-04-2016 IPR018094 Thymidylate kinase GO:0004798|GO:0005524|GO:0006233 KEGG: 00240+2.7.4.9|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7210 SRM_RS14945 9ce23781670e359e2d73113f265066a7 221 PANTHER PTHR10344 2 207 5.0E-56 T 22-04-2016 SRM_RS14945 9ce23781670e359e2d73113f265066a7 221 SUPERFAMILY SSF52540 1 208 7.81E-49 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SRM_RS14945 9ce23781670e359e2d73113f265066a7 221 Pfam PF02223 Thymidylate kinase 6 197 9.4E-47 T 22-04-2016 SRM_RS14945 9ce23781670e359e2d73113f265066a7 221 TIGRFAM TIGR00041 DTMP_kinase: dTMP kinase 3 197 2.1E-48 T 22-04-2016 IPR018094 Thymidylate kinase GO:0004798|GO:0005524|GO:0006233 KEGG: 00240+2.7.4.9|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7210 SRM_RS14945 9ce23781670e359e2d73113f265066a7 221 ProSitePatterns PS01331 Thymidylate kinase signature. 90 102 - T 22-04-2016 IPR018095 Thymidylate kinase, conserved site GO:0004798|GO:0005524|GO:0006233 KEGG: 00240+2.7.4.9|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7210 SRM_RS05970 e319deab9862237e60a6603b5ff29156 404 ProSitePatterns PS00105 Aminotransferases class-I pyridoxal-phosphate attachment site. 240 253 - T 22-04-2016 IPR004838 Aminotransferases, class-I, pyridoxal-phosphate-binding site GO:0003824|GO:0009058|GO:0030170 Reactome: REACT_13 SRM_RS05970 e319deab9862237e60a6603b5ff29156 404 SUPERFAMILY SSF53383 9 399 1.33E-115 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase SRM_RS05970 e319deab9862237e60a6603b5ff29156 404 PANTHER PTHR11751:SF306 20 398 1.7E-168 T 22-04-2016 SRM_RS05970 e319deab9862237e60a6603b5ff29156 404 Gene3D G3DSA:3.40.640.10 51 279 1.3E-77 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 SRM_RS05970 e319deab9862237e60a6603b5ff29156 404 Pfam PF00155 Aminotransferase class I and II 39 396 1.0E-67 T 22-04-2016 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 SRM_RS05970 e319deab9862237e60a6603b5ff29156 404 PANTHER PTHR11751 20 398 1.7E-168 T 22-04-2016 SRM_RS05970 e319deab9862237e60a6603b5ff29156 404 Gene3D G3DSA:3.90.1150.10 280 402 5.2E-38 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 SRM_RS15630 f6e600ced3e895dcce4cd6ce7b64af14 121 SUPERFAMILY SSF51182 5 108 1.06E-23 T 22-04-2016 IPR011051 RmlC-like cupin domain SRM_RS15630 f6e600ced3e895dcce4cd6ce7b64af14 121 PANTHER PTHR36114 1 119 7.1E-17 T 22-04-2016 SRM_RS15630 f6e600ced3e895dcce4cd6ce7b64af14 121 Gene3D G3DSA:2.60.120.10 4 107 3.4E-33 T 22-04-2016 IPR014710 RmlC-like jelly roll fold SRM_RS15630 f6e600ced3e895dcce4cd6ce7b64af14 121 Pfam PF07883 Cupin domain 38 97 3.2E-13 T 22-04-2016 IPR013096 Cupin 2, conserved barrel SRM_RS05115 97c4e3824d77d4466357c6deff2d8d41 254 Pfam PF00902 Sec-independent protein translocase protein (TatC) 5 226 1.4E-58 T 22-04-2016 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 SRM_RS05115 97c4e3824d77d4466357c6deff2d8d41 254 TIGRFAM TIGR00945 tatC: twin arginine-targeting protein translocase TatC 4 231 2.5E-48 T 22-04-2016 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 SRM_RS05115 97c4e3824d77d4466357c6deff2d8d41 254 PANTHER PTHR30371 1 247 2.5E-68 T 22-04-2016 SRM_RS05115 97c4e3824d77d4466357c6deff2d8d41 254 Hamap MF_00902 Sec-independent protein translocase protein TatC [tatC]. 1 245 16.998 T 22-04-2016 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 SRM_RS05115 97c4e3824d77d4466357c6deff2d8d41 254 PANTHER PTHR30371:SF0 1 247 2.5E-68 T 22-04-2016 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 SRM_RS05115 97c4e3824d77d4466357c6deff2d8d41 254 PRINTS PR01840 Bacterial Sec-independent translocation TatC protein family signature 159 187 3.1E-27 T 22-04-2016 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 SRM_RS05115 97c4e3824d77d4466357c6deff2d8d41 254 PRINTS PR01840 Bacterial Sec-independent translocation TatC protein family signature 89 107 3.1E-27 T 22-04-2016 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 SRM_RS05115 97c4e3824d77d4466357c6deff2d8d41 254 PRINTS PR01840 Bacterial Sec-independent translocation TatC protein family signature 2 29 3.1E-27 T 22-04-2016 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 SRM_RS05115 97c4e3824d77d4466357c6deff2d8d41 254 PRINTS PR01840 Bacterial Sec-independent translocation TatC protein family signature 107 133 3.1E-27 T 22-04-2016 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 SRM_RS09025 9e5429a86dc13aa5348927f09f6b75e4 323 SUPERFAMILY SSF53850 6 218 5.75E-69 T 22-04-2016 SRM_RS09025 9e5429a86dc13aa5348927f09f6b75e4 323 PIRSF PIRSF001438 1 314 3.9E-107 T 22-04-2016 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 SRM_RS09025 9e5429a86dc13aa5348927f09f6b75e4 323 Gene3D G3DSA:3.40.190.10 106 200 2.6E-33 T 22-04-2016 SRM_RS09025 9e5429a86dc13aa5348927f09f6b75e4 323 TIGRFAM TIGR00212 hemC: hydroxymethylbilane synthase 7 298 2.1E-93 T 22-04-2016 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 SRM_RS09025 9e5429a86dc13aa5348927f09f6b75e4 323 Pfam PF03900 Porphobilinogen deaminase, C-terminal domain 230 297 2.1E-15 T 22-04-2016 IPR022418 Porphobilinogen deaminase, C-terminal GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 SRM_RS09025 9e5429a86dc13aa5348927f09f6b75e4 323 PANTHER PTHR11557 7 322 1.4E-125 T 22-04-2016 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 SRM_RS09025 9e5429a86dc13aa5348927f09f6b75e4 323 Gene3D G3DSA:3.40.190.10 5 105 3.4E-39 T 22-04-2016 SRM_RS09025 9e5429a86dc13aa5348927f09f6b75e4 323 SUPERFAMILY SSF54782 222 310 5.36E-24 T 22-04-2016 IPR022418 Porphobilinogen deaminase, C-terminal GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 SRM_RS09025 9e5429a86dc13aa5348927f09f6b75e4 323 ProSitePatterns PS00533 Porphobilinogen deaminase cofactor-binding site. 233 249 - T 22-04-2016 IPR022419 Porphobilinogen deaminase, dipyrromethane cofactor binding site GO:0004418|GO:0018160|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 SRM_RS09025 9e5429a86dc13aa5348927f09f6b75e4 323 Gene3D G3DSA:3.30.160.40 225 307 8.9E-24 T 22-04-2016 IPR022418 Porphobilinogen deaminase, C-terminal GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 SRM_RS09025 9e5429a86dc13aa5348927f09f6b75e4 323 Pfam PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain 7 213 1.0E-69 T 22-04-2016 IPR022417 Porphobilinogen deaminase, N-terminal GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 SRM_RS09025 9e5429a86dc13aa5348927f09f6b75e4 323 Hamap MF_00260 Porphobilinogen deaminase [hemC]. 6 299 34.876 T 22-04-2016 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 SRM_RS09025 9e5429a86dc13aa5348927f09f6b75e4 323 PRINTS PR00151 Porphobilinogen deaminase signature 75 94 6.8E-39 T 22-04-2016 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 SRM_RS09025 9e5429a86dc13aa5348927f09f6b75e4 323 PRINTS PR00151 Porphobilinogen deaminase signature 125 142 6.8E-39 T 22-04-2016 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 SRM_RS09025 9e5429a86dc13aa5348927f09f6b75e4 323 PRINTS PR00151 Porphobilinogen deaminase signature 44 64 6.8E-39 T 22-04-2016 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 SRM_RS09025 9e5429a86dc13aa5348927f09f6b75e4 323 PRINTS PR00151 Porphobilinogen deaminase signature 232 249 6.8E-39 T 22-04-2016 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 SRM_RS09025 9e5429a86dc13aa5348927f09f6b75e4 323 PRINTS PR00151 Porphobilinogen deaminase signature 144 161 6.8E-39 T 22-04-2016 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 SRM_RS13930 739a6aa794848adb6a6292005b2d6127 459 Pfam PF06745 KaiC 79 151 7.7E-12 T 22-04-2016 IPR014774 KaiC-like domain SRM_RS13930 739a6aa794848adb6a6292005b2d6127 459 SUPERFAMILY SSF52540 72 296 1.39E-46 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SRM_RS13930 739a6aa794848adb6a6292005b2d6127 459 Gene3D G3DSA:3.40.50.300 63 281 1.1E-50 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SRM_RS13930 739a6aa794848adb6a6292005b2d6127 459 Gene3D G3DSA:3.30.230.10 291 458 1.3E-33 T 22-04-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup SRM_RS13930 739a6aa794848adb6a6292005b2d6127 459 PANTHER PTHR32472 1 459 2.1E-198 T 22-04-2016 SRM_RS13930 739a6aa794848adb6a6292005b2d6127 459 PRINTS PR01874 DNA repair protein radA signature 177 201 8.9E-90 T 22-04-2016 SRM_RS13930 739a6aa794848adb6a6292005b2d6127 459 PRINTS PR01874 DNA repair protein radA signature 87 115 8.9E-90 T 22-04-2016 SRM_RS13930 739a6aa794848adb6a6292005b2d6127 459 PRINTS PR01874 DNA repair protein radA signature 251 277 8.9E-90 T 22-04-2016 SRM_RS13930 739a6aa794848adb6a6292005b2d6127 459 PRINTS PR01874 DNA repair protein radA signature 325 348 8.9E-90 T 22-04-2016 SRM_RS13930 739a6aa794848adb6a6292005b2d6127 459 PRINTS PR01874 DNA repair protein radA signature 127 144 8.9E-90 T 22-04-2016 SRM_RS13930 739a6aa794848adb6a6292005b2d6127 459 PRINTS PR01874 DNA repair protein radA signature 216 244 8.9E-90 T 22-04-2016 SRM_RS13930 739a6aa794848adb6a6292005b2d6127 459 PRINTS PR01874 DNA repair protein radA signature 10 34 8.9E-90 T 22-04-2016 SRM_RS13930 739a6aa794848adb6a6292005b2d6127 459 SMART SM00382 95 248 8.7E-9 T 22-04-2016 IPR003593 AAA+ ATPase domain SRM_RS13930 739a6aa794848adb6a6292005b2d6127 459 Pfam PF13541 Subunit ChlI of Mg-chelatase 343 433 6.0E-11 T 22-04-2016 SRM_RS13930 739a6aa794848adb6a6292005b2d6127 459 TIGRFAM TIGR00416 sms: DNA repair protein RadA 1 454 1.2E-182 T 22-04-2016 IPR004504 DNA repair protein RadA GO:0003684|GO:0005524|GO:0006281 SRM_RS13930 739a6aa794848adb6a6292005b2d6127 459 SUPERFAMILY SSF54211 258 272 3.75E-41 T 22-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold SRM_RS13930 739a6aa794848adb6a6292005b2d6127 459 SUPERFAMILY SSF54211 306 458 3.75E-41 T 22-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold SRM_RS09245 f279aa316077c6999f53f9d6c09fa20a 246 SUPERFAMILY SSF53335 38 234 5.14E-21 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SRM_RS09245 f279aa316077c6999f53f9d6c09fa20a 246 Gene3D G3DSA:3.40.50.150 55 222 3.1E-19 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SRM_RS09245 f279aa316077c6999f53f9d6c09fa20a 246 PANTHER PTHR10108 61 169 1.3E-12 T 22-04-2016 SRM_RS09245 f279aa316077c6999f53f9d6c09fa20a 246 Pfam PF13649 Methyltransferase domain 66 169 7.2E-16 T 22-04-2016 SRM_RS11860 4d7c1a8bba4826ec7d680778eaf125d6 222 Gene3D G3DSA:3.40.1010.10 1 108 2.6E-17 T 22-04-2016 IPR014777 Tetrapyrrole methylase, subdomain 1 GO:0008152|GO:0008168 SRM_RS11860 4d7c1a8bba4826ec7d680778eaf125d6 222 ProSitePatterns PS01296 RsmI AdoMet-dependent methyltransferase protein family signature. 79 90 - T 22-04-2016 IPR018063 SAM-dependent methyltransferase RsmI, conserved site GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 SRM_RS11860 4d7c1a8bba4826ec7d680778eaf125d6 222 PANTHER PTHR21091:SF18 1 202 2.5E-85 T 22-04-2016 SRM_RS11860 4d7c1a8bba4826ec7d680778eaf125d6 222 Gene3D G3DSA:3.30.950.10 109 221 1.5E-41 T 22-04-2016 IPR014776 Tetrapyrrole methylase, subdomain 2 GO:0008152|GO:0008168 SRM_RS11860 4d7c1a8bba4826ec7d680778eaf125d6 222 TIGRFAM TIGR00096 TIGR00096: 16S rRNA (cytidine(1402)-2'-O)-methyltransferase 1 220 1.5E-76 T 22-04-2016 IPR008189 rRNA small subunit methyltransferase I GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 SRM_RS11860 4d7c1a8bba4826ec7d680778eaf125d6 222 PANTHER PTHR21091 1 202 2.5E-85 T 22-04-2016 SRM_RS11860 4d7c1a8bba4826ec7d680778eaf125d6 222 Hamap MF_01877 Ribosomal RNA small subunit methyltransferase I [rsmI]. 1 220 36.868 T 22-04-2016 IPR008189 rRNA small subunit methyltransferase I GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 SRM_RS11860 4d7c1a8bba4826ec7d680778eaf125d6 222 SUPERFAMILY SSF53790 1 218 6.54E-81 T 22-04-2016 IPR000878 Tetrapyrrole methylase GO:0008152|GO:0008168 SRM_RS11860 4d7c1a8bba4826ec7d680778eaf125d6 222 Pfam PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases 1 200 7.2E-37 T 22-04-2016 IPR000878 Tetrapyrrole methylase GO:0008152|GO:0008168 SRM_RS11860 4d7c1a8bba4826ec7d680778eaf125d6 222 PIRSF PIRSF005917 1 222 6.7E-94 T 22-04-2016 IPR008189 rRNA small subunit methyltransferase I GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 SRM_RS08475 4c987563d95cbe75863bdc5c13c49728 544 PANTHER PTHR22773 1 522 5.3E-193 T 22-04-2016 SRM_RS08475 4c987563d95cbe75863bdc5c13c49728 544 Pfam PF00361 Proton-conducting membrane transporter 135 418 9.2E-75 T 22-04-2016 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit Reactome: REACT_6305 SRM_RS08475 4c987563d95cbe75863bdc5c13c49728 544 TIGRFAM TIGR01972 NDH_I_M: proton-translocating NADH-quinone oxidoreductase, chain M 8 500 7.2E-177 T 22-04-2016 IPR010227 NADH-quinone oxidoreductase, chain M/4 GO:0008137|GO:0042773|GO:0055114 SRM_RS08475 4c987563d95cbe75863bdc5c13c49728 544 PANTHER PTHR22773:SF40 1 522 5.3E-193 T 22-04-2016 SRM_RS08475 4c987563d95cbe75863bdc5c13c49728 544 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 140 159 2.2E-45 T 22-04-2016 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 SRM_RS08475 4c987563d95cbe75863bdc5c13c49728 544 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 335 354 2.2E-45 T 22-04-2016 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 SRM_RS08475 4c987563d95cbe75863bdc5c13c49728 544 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 387 413 2.2E-45 T 22-04-2016 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 SRM_RS08475 4c987563d95cbe75863bdc5c13c49728 544 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 247 271 2.2E-45 T 22-04-2016 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 SRM_RS08475 4c987563d95cbe75863bdc5c13c49728 544 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 170 194 2.2E-45 T 22-04-2016 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 SRM_RS08350 0f770dfd8cb47e3fc5d16975e3603a1d 220 Pfam PF01557 Fumarylacetoacetate (FAA) hydrolase family 17 209 2.1E-61 T 22-04-2016 IPR011234 Fumarylacetoacetase, C-terminal-related GO:0003824|GO:0008152 SRM_RS08350 0f770dfd8cb47e3fc5d16975e3603a1d 220 Gene3D G3DSA:3.90.850.10 9 217 1.5E-84 T 22-04-2016 IPR011234 Fumarylacetoacetase, C-terminal-related GO:0003824|GO:0008152 SRM_RS08350 0f770dfd8cb47e3fc5d16975e3603a1d 220 PANTHER PTHR11820 10 219 5.2E-96 T 22-04-2016 SRM_RS08350 0f770dfd8cb47e3fc5d16975e3603a1d 220 SUPERFAMILY SSF56529 10 216 2.49E-74 T 22-04-2016 IPR011234 Fumarylacetoacetase, C-terminal-related GO:0003824|GO:0008152 SRM_RS01285 13abe8c51e010311b16ad794c83e43ec 296 Gene3D G3DSA:3.40.30.10 130 294 9.7E-41 T 22-04-2016 IPR012336 Thioredoxin-like fold SRM_RS01285 13abe8c51e010311b16ad794c83e43ec 296 PANTHER PTHR12151 139 295 5.3E-30 T 22-04-2016 IPR003782 Copper chaperone SCO1/SenC SRM_RS01285 13abe8c51e010311b16ad794c83e43ec 296 Pfam PF11604 Copper binding periplasmic protein CusF 37 94 3.8E-10 T 22-04-2016 IPR021647 Copper binding periplasmic protein CusF SRM_RS01285 13abe8c51e010311b16ad794c83e43ec 296 SUPERFAMILY SSF52833 139 293 5.16E-36 T 22-04-2016 IPR012336 Thioredoxin-like fold SRM_RS01285 13abe8c51e010311b16ad794c83e43ec 296 Pfam PF02630 SCO1/SenC 130 272 4.7E-20 T 22-04-2016 IPR003782 Copper chaperone SCO1/SenC SRM_RS10840 bd04ba099d34c7e3fc96f325c344b863 551 PANTHER PTHR11533 31 490 4.0E-78 T 22-04-2016 IPR001930 Peptidase M1, alanine aminopeptidase/leukotriene A4 hydrolase GO:0006508 SRM_RS10840 bd04ba099d34c7e3fc96f325c344b863 551 SUPERFAMILY SSF63737 37 229 1.03E-21 T 22-04-2016 SRM_RS10840 bd04ba099d34c7e3fc96f325c344b863 551 Pfam PF01433 Peptidase family M1 47 404 7.8E-43 T 22-04-2016 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 SRM_RS10840 bd04ba099d34c7e3fc96f325c344b863 551 SUPERFAMILY SSF55486 237 469 9.08E-65 T 22-04-2016 SRM_RS10840 bd04ba099d34c7e3fc96f325c344b863 551 Gene3D G3DSA:1.10.390.10 329 470 2.8E-35 T 22-04-2016 SRM_RS10840 bd04ba099d34c7e3fc96f325c344b863 551 PANTHER PTHR11533:SF163 31 490 4.0E-78 T 22-04-2016 SRM_RS10840 bd04ba099d34c7e3fc96f325c344b863 551 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 288 298 1.4E-9 T 22-04-2016 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 SRM_RS10840 bd04ba099d34c7e3fc96f325c344b863 551 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 165 180 1.4E-9 T 22-04-2016 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 SRM_RS10840 bd04ba099d34c7e3fc96f325c344b863 551 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 334 346 1.4E-9 T 22-04-2016 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 SRM_RS10840 bd04ba099d34c7e3fc96f325c344b863 551 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 315 330 1.4E-9 T 22-04-2016 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 SRM_RS12480 501510dab22febaed523b365804faf12 179 Pfam PF02469 Fasciclin domain 46 171 2.9E-37 T 22-04-2016 IPR000782 FAS1 domain SRM_RS12480 501510dab22febaed523b365804faf12 179 SMART SM00554 70 172 8.7E-33 T 22-04-2016 IPR000782 FAS1 domain SRM_RS12480 501510dab22febaed523b365804faf12 179 PANTHER PTHR10900 32 172 8.1E-50 T 22-04-2016 SRM_RS12480 501510dab22febaed523b365804faf12 179 Gene3D G3DSA:2.30.180.10 36 172 1.4E-44 T 22-04-2016 IPR000782 FAS1 domain SRM_RS12480 501510dab22febaed523b365804faf12 179 SUPERFAMILY SSF82153 27 173 1.44E-40 T 22-04-2016 IPR000782 FAS1 domain SRM_RS06020 0426b4fa107b9903e4c5974ef994c3e0 334 PANTHER PTHR10992:SF778 230 333 3.4E-20 T 22-04-2016 SRM_RS06020 0426b4fa107b9903e4c5974ef994c3e0 334 PANTHER PTHR10992:SF778 36 202 3.4E-20 T 22-04-2016 SRM_RS06020 0426b4fa107b9903e4c5974ef994c3e0 334 SUPERFAMILY SSF53474 51 331 7.59E-35 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold SRM_RS06020 0426b4fa107b9903e4c5974ef994c3e0 334 PANTHER PTHR10992 230 333 3.4E-20 T 22-04-2016 SRM_RS06020 0426b4fa107b9903e4c5974ef994c3e0 334 PANTHER PTHR10992 36 202 3.4E-20 T 22-04-2016 SRM_RS06020 0426b4fa107b9903e4c5974ef994c3e0 334 Gene3D G3DSA:3.40.50.1820 48 332 7.1E-34 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold SRM_RS06020 0426b4fa107b9903e4c5974ef994c3e0 334 Pfam PF12697 Alpha/beta hydrolase family 75 325 7.0E-14 T 22-04-2016 IPR000073 Alpha/beta hydrolase fold-1 SRM_RS00225 6b0ff667226671aa41b8927dda61c02b 258 SUPERFAMILY SSF49299 35 130 2.49E-20 T 22-04-2016 IPR000601 PKD domain SRM_RS00225 6b0ff667226671aa41b8927dda61c02b 258 SMART SM00089 145 220 5.3E-11 T 22-04-2016 IPR022409 PKD/Chitinase domain SRM_RS00225 6b0ff667226671aa41b8927dda61c02b 258 SMART SM00089 49 131 4.2E-16 T 22-04-2016 IPR022409 PKD/Chitinase domain SRM_RS00225 6b0ff667226671aa41b8927dda61c02b 258 Gene3D G3DSA:2.60.40.670 55 129 6.2E-20 T 22-04-2016 IPR000601 PKD domain SRM_RS00225 6b0ff667226671aa41b8927dda61c02b 258 Gene3D G3DSA:2.60.40.670 146 218 6.3E-14 T 22-04-2016 IPR000601 PKD domain SRM_RS00225 6b0ff667226671aa41b8927dda61c02b 258 SUPERFAMILY SSF49299 138 219 1.27E-12 T 22-04-2016 IPR000601 PKD domain SRM_RS00225 6b0ff667226671aa41b8927dda61c02b 258 Pfam PF00801 PKD domain 147 210 1.3E-12 T 22-04-2016 IPR000601 PKD domain SRM_RS00225 6b0ff667226671aa41b8927dda61c02b 258 Pfam PF00801 PKD domain 57 122 2.1E-15 T 22-04-2016 IPR000601 PKD domain SRM_RS08825 b1b4af0ef6b8c0576effbedf75e6bdb3 281 Gene3D G3DSA:3.60.110.10 3 270 3.7E-63 T 22-04-2016 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 SRM_RS08825 b1b4af0ef6b8c0576effbedf75e6bdb3 281 PANTHER PTHR23088 2 273 6.8E-66 T 22-04-2016 SRM_RS08825 b1b4af0ef6b8c0576effbedf75e6bdb3 281 Pfam PF00795 Carbon-nitrogen hydrolase 4 244 1.0E-38 T 22-04-2016 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 SRM_RS08825 b1b4af0ef6b8c0576effbedf75e6bdb3 281 SUPERFAMILY SSF56317 3 267 3.79E-60 T 22-04-2016 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 SRM_RS11225 9457a1387ba553e8ac5283d126296e8d 665 SMART SM00861 344 517 1.1E-54 T 22-04-2016 IPR005475 Transketolase-like, pyrimidine-binding domain SRM_RS11225 9457a1387ba553e8ac5283d126296e8d 665 Gene3D G3DSA:3.40.50.970 18 356 6.5E-103 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold SRM_RS11225 9457a1387ba553e8ac5283d126296e8d 665 SUPERFAMILY SSF52518 17 319 2.16E-84 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold SRM_RS11225 9457a1387ba553e8ac5283d126296e8d 665 Gene3D G3DSA:3.40.50.920 535 654 6.8E-37 T 22-04-2016 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 SRM_RS11225 9457a1387ba553e8ac5283d126296e8d 665 SUPERFAMILY SSF52922 527 663 2.88E-33 T 22-04-2016 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 SRM_RS11225 9457a1387ba553e8ac5283d126296e8d 665 Gene3D G3DSA:3.40.50.970 357 534 9.2E-70 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold SRM_RS11225 9457a1387ba553e8ac5283d126296e8d 665 SUPERFAMILY SSF52518 344 542 5.33E-61 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold SRM_RS11225 9457a1387ba553e8ac5283d126296e8d 665 Pfam PF00676 Dehydrogenase E1 component 27 311 8.7E-73 T 22-04-2016 IPR001017 Dehydrogenase, E1 component GO:0008152|GO:0016624 SRM_RS11225 9457a1387ba553e8ac5283d126296e8d 665 Pfam PF02779 Transketolase, pyrimidine binding domain 347 516 7.6E-40 T 22-04-2016 IPR005475 Transketolase-like, pyrimidine-binding domain SRM_RS11225 9457a1387ba553e8ac5283d126296e8d 665 PANTHER PTHR11624:SF21 151 298 1.2E-147 T 22-04-2016 SRM_RS11225 9457a1387ba553e8ac5283d126296e8d 665 PANTHER PTHR11624:SF21 330 665 1.2E-147 T 22-04-2016 SRM_RS11225 9457a1387ba553e8ac5283d126296e8d 665 PANTHER PTHR11624 151 298 1.2E-147 T 22-04-2016 IPR033247 Transketolase family SRM_RS11225 9457a1387ba553e8ac5283d126296e8d 665 PANTHER PTHR11624 330 665 1.2E-147 T 22-04-2016 IPR033247 Transketolase family SRM_RS11225 9457a1387ba553e8ac5283d126296e8d 665 Pfam PF02780 Transketolase, C-terminal domain 532 648 7.9E-30 T 22-04-2016 IPR033248 Transketolase, C-terminal domain SRM_RS07270 b711204a5e50f75cdd6c504a0f1a2881 207 SUPERFAMILY SSF46689 11 79 6.31E-18 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 SRM_RS07270 b711204a5e50f75cdd6c504a0f1a2881 207 Pfam PF00440 Bacterial regulatory proteins, tetR family 17 63 8.4E-16 T 22-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 SRM_RS07270 b711204a5e50f75cdd6c504a0f1a2881 207 SUPERFAMILY SSF48498 88 198 4.45E-20 T 22-04-2016 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal SRM_RS07270 b711204a5e50f75cdd6c504a0f1a2881 207 Pfam PF13305 WHG domain 92 176 5.7E-16 T 22-04-2016 IPR025996 WHG domain SRM_RS07270 b711204a5e50f75cdd6c504a0f1a2881 207 PANTHER PTHR30055 1 197 1.5E-29 T 22-04-2016 SRM_RS07270 b711204a5e50f75cdd6c504a0f1a2881 207 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 17 30 3.4E-8 T 22-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 SRM_RS07270 b711204a5e50f75cdd6c504a0f1a2881 207 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 38 61 3.4E-8 T 22-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 SRM_RS07270 b711204a5e50f75cdd6c504a0f1a2881 207 Gene3D G3DSA:1.10.357.10 11 200 6.5E-47 T 22-04-2016 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 SRM_RS13345 13e324bc085bc6e73f38fec20361b6b1 472 ProSitePatterns PS01219 Ammonium transporters signature. 213 238 - T 22-04-2016 IPR018047 Ammonium transporter, conserved site GO:0008519|GO:0016020|GO:0072488 SRM_RS13345 13e324bc085bc6e73f38fec20361b6b1 472 Pfam PF00909 Ammonium Transporter Family 63 450 8.1E-114 T 22-04-2016 IPR024041 Ammonium transporter AmtB-like domain GO:0008519|GO:0015696|GO:0016020 SRM_RS13345 13e324bc085bc6e73f38fec20361b6b1 472 Gene3D G3DSA:1.10.3430.10 55 431 5.0E-118 T 22-04-2016 IPR029020 Ammonium/urea transporter SRM_RS13345 13e324bc085bc6e73f38fec20361b6b1 472 SUPERFAMILY SSF111352 58 431 2.75E-108 T 22-04-2016 IPR024041 Ammonium transporter AmtB-like domain GO:0008519|GO:0015696|GO:0016020 SRM_RS13345 13e324bc085bc6e73f38fec20361b6b1 472 PANTHER PTHR11730:SF6 33 452 7.1E-164 T 22-04-2016 SRM_RS13345 13e324bc085bc6e73f38fec20361b6b1 472 PANTHER PTHR11730 33 452 7.1E-164 T 22-04-2016 IPR001905 Ammonium transporter GO:0008519|GO:0016020|GO:0072488 SRM_RS13345 13e324bc085bc6e73f38fec20361b6b1 472 PRINTS PR00342 Rhesus blood group protein signature 101 118 4.9E-8 T 22-04-2016 IPR002229 Blood group Rhesus C/E/D polypeptide GO:0016020 SRM_RS13345 13e324bc085bc6e73f38fec20361b6b1 472 PRINTS PR00342 Rhesus blood group protein signature 343 361 4.9E-8 T 22-04-2016 IPR002229 Blood group Rhesus C/E/D polypeptide GO:0016020 SRM_RS13345 13e324bc085bc6e73f38fec20361b6b1 472 PRINTS PR00342 Rhesus blood group protein signature 257 275 4.9E-8 T 22-04-2016 IPR002229 Blood group Rhesus C/E/D polypeptide GO:0016020 SRM_RS13345 13e324bc085bc6e73f38fec20361b6b1 472 PRINTS PR00342 Rhesus blood group protein signature 288 310 4.9E-8 T 22-04-2016 IPR002229 Blood group Rhesus C/E/D polypeptide GO:0016020 SRM_RS13345 13e324bc085bc6e73f38fec20361b6b1 472 TIGRFAM TIGR00836 amt: ammonium transporter 61 450 2.5E-121 T 22-04-2016 IPR001905 Ammonium transporter GO:0008519|GO:0016020|GO:0072488 SRM_RS08235 899252833aa644cd6ab2b517ef982d38 371 PIRSF PIRSF000451 1 371 1.2E-111 T 22-04-2016 IPR011141 Polyketide synthase, type III GO:0009058|GO:0016747 SRM_RS08235 899252833aa644cd6ab2b517ef982d38 371 SUPERFAMILY SSF53901 227 369 3.45E-37 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 SRM_RS08235 899252833aa644cd6ab2b517ef982d38 371 PANTHER PTHR11877:SF10 79 370 1.4E-71 T 22-04-2016 SRM_RS08235 899252833aa644cd6ab2b517ef982d38 371 Gene3D G3DSA:3.40.47.10 228 369 1.8E-39 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 SRM_RS08235 899252833aa644cd6ab2b517ef982d38 371 Pfam PF02797 Chalcone and stilbene synthases, C-terminal domain 246 368 7.0E-23 T 22-04-2016 IPR012328 Chalcone/stilbene synthase, C-terminal SRM_RS08235 899252833aa644cd6ab2b517ef982d38 371 Pfam PF00195 Chalcone and stilbene synthases, N-terminal domain 7 215 4.9E-25 T 22-04-2016 IPR001099 Chalcone/stilbene synthase, N-terminal SRM_RS08235 899252833aa644cd6ab2b517ef982d38 371 SUPERFAMILY SSF53901 2 218 6.91E-49 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 SRM_RS08235 899252833aa644cd6ab2b517ef982d38 371 Gene3D G3DSA:3.40.47.10 2 220 4.0E-57 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 SRM_RS08235 899252833aa644cd6ab2b517ef982d38 371 PANTHER PTHR11877 79 370 1.4E-71 T 22-04-2016 SRM_RS15355 63d5772fcbb84ab59ee7a47e98084633 249 PANTHER PTHR28286 17 234 2.9E-31 T 22-04-2016 SRM_RS15355 63d5772fcbb84ab59ee7a47e98084633 249 SUPERFAMILY SSF81321 11 238 4.27E-61 T 22-04-2016 SRM_RS15355 63d5772fcbb84ab59ee7a47e98084633 249 ProSitePatterns PS00327 Bacterial rhodopsins retinal binding site. 215 226 - T 22-04-2016 IPR018229 Rhodopsin, retinal binding site GO:0005216|GO:0006811|GO:0016020 SRM_RS15355 63d5772fcbb84ab59ee7a47e98084633 249 Pfam PF01036 Bacteriorhodopsin-like protein 14 234 1.5E-50 T 22-04-2016 IPR001425 Archaeal/bacterial/fungal rhodopsins GO:0005216|GO:0006811|GO:0016020 SRM_RS15355 63d5772fcbb84ab59ee7a47e98084633 249 SMART SM01021 11 249 1.2E-86 T 22-04-2016 IPR001425 Archaeal/bacterial/fungal rhodopsins GO:0005216|GO:0006811|GO:0016020 SRM_RS15355 63d5772fcbb84ab59ee7a47e98084633 249 Gene3D G3DSA:1.20.1070.10 14 238 1.3E-57 T 22-04-2016 SRM_RS15355 63d5772fcbb84ab59ee7a47e98084633 249 PRINTS PR00251 Bacterial opsin signature 213 231 5.0E-59 T 22-04-2016 IPR001425 Archaeal/bacterial/fungal rhodopsins GO:0005216|GO:0006811|GO:0016020 SRM_RS15355 63d5772fcbb84ab59ee7a47e98084633 249 PRINTS PR00251 Bacterial opsin signature 44 64 5.0E-59 T 22-04-2016 IPR001425 Archaeal/bacterial/fungal rhodopsins GO:0005216|GO:0006811|GO:0016020 SRM_RS15355 63d5772fcbb84ab59ee7a47e98084633 249 PRINTS PR00251 Bacterial opsin signature 142 163 5.0E-59 T 22-04-2016 IPR001425 Archaeal/bacterial/fungal rhodopsins GO:0005216|GO:0006811|GO:0016020 SRM_RS15355 63d5772fcbb84ab59ee7a47e98084633 249 PRINTS PR00251 Bacterial opsin signature 88 109 5.0E-59 T 22-04-2016 IPR001425 Archaeal/bacterial/fungal rhodopsins GO:0005216|GO:0006811|GO:0016020 SRM_RS15355 63d5772fcbb84ab59ee7a47e98084633 249 PRINTS PR00251 Bacterial opsin signature 15 34 5.0E-59 T 22-04-2016 IPR001425 Archaeal/bacterial/fungal rhodopsins GO:0005216|GO:0006811|GO:0016020 SRM_RS15355 63d5772fcbb84ab59ee7a47e98084633 249 PRINTS PR00251 Bacterial opsin signature 181 199 5.0E-59 T 22-04-2016 IPR001425 Archaeal/bacterial/fungal rhodopsins GO:0005216|GO:0006811|GO:0016020 SRM_RS15355 63d5772fcbb84ab59ee7a47e98084633 249 PRINTS PR00251 Bacterial opsin signature 116 135 5.0E-59 T 22-04-2016 IPR001425 Archaeal/bacterial/fungal rhodopsins GO:0005216|GO:0006811|GO:0016020 SRM_RS13750 85a1fd23da51d88b33a3099f58a3cc17 112 PANTHER PTHR33154 1 108 9.9E-25 T 22-04-2016 SRM_RS13750 85a1fd23da51d88b33a3099f58a3cc17 112 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 53 68 2.5E-10 T 22-04-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 SRM_RS13750 85a1fd23da51d88b33a3099f58a3cc17 112 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 68 83 2.5E-10 T 22-04-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 SRM_RS13750 85a1fd23da51d88b33a3099f58a3cc17 112 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 20 35 2.5E-10 T 22-04-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 SRM_RS13750 85a1fd23da51d88b33a3099f58a3cc17 112 SMART SM00418 18 97 3.3E-21 T 22-04-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 SRM_RS13750 85a1fd23da51d88b33a3099f58a3cc17 112 SUPERFAMILY SSF46785 14 98 6.72E-26 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SRM_RS13750 85a1fd23da51d88b33a3099f58a3cc17 112 Pfam PF12840 Helix-turn-helix domain 17 77 2.7E-15 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SRM_RS13750 85a1fd23da51d88b33a3099f58a3cc17 112 Gene3D G3DSA:1.10.10.10 9 100 1.6E-28 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SRM_RS07680 7fcdbcf792c3edcad7a42688c5dadf58 210 Pfam PF14681 Uracil phosphoribosyltransferase 6 207 3.6E-68 T 22-04-2016 IPR029057 Phosphoribosyltransferase-like SRM_RS07680 7fcdbcf792c3edcad7a42688c5dadf58 210 SUPERFAMILY SSF53271 4 206 1.44E-61 T 22-04-2016 IPR029057 Phosphoribosyltransferase-like SRM_RS07680 7fcdbcf792c3edcad7a42688c5dadf58 210 PANTHER PTHR10285 6 197 2.1E-73 T 22-04-2016 SRM_RS07680 7fcdbcf792c3edcad7a42688c5dadf58 210 Hamap MF_01218_B Uracil phosphoribosyltransferase [upp]. 3 208 41.266 T 22-04-2016 IPR005765 Uracil phosphoribosyl transferase GO:0004845|GO:0006223 KEGG: 00240+2.4.2.9|MetaCyc: PWY-7183|UniPathway: UPA00574 SRM_RS07680 7fcdbcf792c3edcad7a42688c5dadf58 210 PANTHER PTHR10285:SF46 6 197 2.1E-73 T 22-04-2016 SRM_RS07680 7fcdbcf792c3edcad7a42688c5dadf58 210 Gene3D G3DSA:3.40.50.2020 3 207 1.9E-72 T 22-04-2016 IPR029057 Phosphoribosyltransferase-like SRM_RS07680 7fcdbcf792c3edcad7a42688c5dadf58 210 TIGRFAM TIGR01091 upp: uracil phosphoribosyltransferase 4 207 1.7E-77 T 22-04-2016 IPR005765 Uracil phosphoribosyl transferase GO:0004845|GO:0006223 KEGG: 00240+2.4.2.9|MetaCyc: PWY-7183|UniPathway: UPA00574 SRM_RS05040 4e6cb22824ad0e18b07f444aea76f9f9 284 Gene3D G3DSA:3.40.50.880 53 203 1.7E-34 T 22-04-2016 IPR029062 Class I glutamine amidotransferase-like SRM_RS05040 4e6cb22824ad0e18b07f444aea76f9f9 284 SUPERFAMILY SSF52317 50 210 1.92E-35 T 22-04-2016 IPR029062 Class I glutamine amidotransferase-like SRM_RS05040 4e6cb22824ad0e18b07f444aea76f9f9 284 PANTHER PTHR11922 1 206 2.5E-24 T 22-04-2016 SRM_RS05040 4e6cb22824ad0e18b07f444aea76f9f9 284 PANTHER PTHR11922:SF11 1 206 2.5E-24 T 22-04-2016 SRM_RS05040 4e6cb22824ad0e18b07f444aea76f9f9 284 Pfam PF00117 Glutamine amidotransferase class-I 58 206 9.6E-15 T 22-04-2016 IPR017926 Glutamine amidotransferase Reactome: REACT_1698 SRM_RS15990 d5b07b38c4479fabeb3b5c223d5bd30d 122 PANTHER PTHR30405 4 117 1.5E-23 T 22-04-2016 SRM_RS15990 d5b07b38c4479fabeb3b5c223d5bd30d 122 Pfam PF01385 Probable transposase 36 119 1.1E-22 T 22-04-2016 IPR001959 Probable transposase, IS891/IS1136/IS1341 SRM_RS07455 842f51dba9406b3dde588e4f1f23f455 97 SUPERFAMILY SSF117991 20 95 1.44E-15 T 22-04-2016 IPR027471 YbeD-like domain SRM_RS07455 842f51dba9406b3dde588e4f1f23f455 97 Pfam PF04359 Protein of unknown function (DUF493) 26 95 3.7E-9 T 22-04-2016 IPR007454 Uncharacterised protein family UPF0250 SRM_RS07455 842f51dba9406b3dde588e4f1f23f455 97 Gene3D G3DSA:3.30.70.1460 21 95 2.9E-14 T 22-04-2016 IPR027471 YbeD-like domain SRM_RS04780 c6bb0e11de200ba8a80b02e3b84d0035 346 PANTHER PTHR11695:SF601 12 346 2.3E-132 T 22-04-2016 SRM_RS04780 c6bb0e11de200ba8a80b02e3b84d0035 346 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 26 126 5.3E-25 T 22-04-2016 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 SRM_RS04780 c6bb0e11de200ba8a80b02e3b84d0035 346 ProSitePatterns PS00059 Zinc-containing alcohol dehydrogenases signature. 58 72 - T 22-04-2016 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site GO:0008270|GO:0016491|GO:0055114 SRM_RS04780 c6bb0e11de200ba8a80b02e3b84d0035 346 Gene3D G3DSA:3.90.180.10 1 170 4.0E-42 T 22-04-2016 IPR011032 GroES-like SRM_RS04780 c6bb0e11de200ba8a80b02e3b84d0035 346 SUPERFAMILY SSF50129 1 168 1.03E-49 T 22-04-2016 IPR011032 GroES-like SRM_RS04780 c6bb0e11de200ba8a80b02e3b84d0035 346 SUPERFAMILY SSF51735 149 313 1.6E-39 T 22-04-2016 IPR016040 NAD(P)-binding domain SRM_RS04780 c6bb0e11de200ba8a80b02e3b84d0035 346 PANTHER PTHR11695 12 346 2.3E-132 T 22-04-2016 IPR002085 Alcohol dehydrogenase superfamily, zinc-type GO:0008270|GO:0016491|GO:0055114 SRM_RS04780 c6bb0e11de200ba8a80b02e3b84d0035 346 Gene3D G3DSA:3.40.50.720 171 291 2.2E-38 T 22-04-2016 IPR016040 NAD(P)-binding domain SRM_RS04780 c6bb0e11de200ba8a80b02e3b84d0035 346 Pfam PF00107 Zinc-binding dehydrogenase 179 308 1.7E-25 T 22-04-2016 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 SRM_RS04780 c6bb0e11de200ba8a80b02e3b84d0035 346 Pfam PF13823 Alcohol dehydrogenase GroES-associated 1 23 2.9E-6 T 22-04-2016 IPR027399 Alcohol dehydrogenase GroES-associated SRM_RS11495 dd34fffce079bc1b844ff7f5214cda9a 320 PANTHER PTHR32502:SF3 46 219 6.9E-41 T 22-04-2016 SRM_RS11495 dd34fffce079bc1b844ff7f5214cda9a 320 Gene3D G3DSA:3.40.50.10490 41 225 5.5E-50 T 22-04-2016 SRM_RS11495 dd34fffce079bc1b844ff7f5214cda9a 320 SUPERFAMILY SSF53697 49 290 2.38E-24 T 22-04-2016 SRM_RS11495 dd34fffce079bc1b844ff7f5214cda9a 320 Pfam PF01380 SIS domain 89 224 4.1E-8 T 22-04-2016 IPR001347 Sugar isomerase (SIS) GO:0005975|GO:0030246 Reactome: REACT_17015 SRM_RS11495 dd34fffce079bc1b844ff7f5214cda9a 320 PANTHER PTHR32502 46 219 6.9E-41 T 22-04-2016 SRM_RS08950 7ae177f19c8f4953c76798fadd267bac 373 PANTHER PTHR11076 19 371 1.1E-137 T 22-04-2016 SRM_RS08950 7ae177f19c8f4953c76798fadd267bac 373 Pfam PF11799 impB/mucB/samB family C-terminal domain 250 362 1.4E-24 T 22-04-2016 IPR017961 DNA polymerase, Y-family, little finger domain GO:0003684|GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 SRM_RS08950 7ae177f19c8f4953c76798fadd267bac 373 Gene3D G3DSA:3.30.70.270 83 181 5.9E-33 T 22-04-2016 SRM_RS08950 7ae177f19c8f4953c76798fadd267bac 373 SUPERFAMILY SSF100879 255 355 2.51E-26 T 22-04-2016 IPR017961 DNA polymerase, Y-family, little finger domain GO:0003684|GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 SRM_RS08950 7ae177f19c8f4953c76798fadd267bac 373 Gene3D G3DSA:1.10.150.20 183 252 9.7E-23 T 22-04-2016 SRM_RS08950 7ae177f19c8f4953c76798fadd267bac 373 SUPERFAMILY SSF56672 16 251 7.65E-86 T 22-04-2016 SRM_RS08950 7ae177f19c8f4953c76798fadd267bac 373 Pfam PF00817 impB/mucB/samB family 24 171 1.7E-45 T 22-04-2016 IPR001126 UmuC domain GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 SRM_RS08950 7ae177f19c8f4953c76798fadd267bac 373 Pfam PF11798 IMS family HHH motif 183 214 2.0E-8 T 22-04-2016 IPR024728 DNA polymerase type-Y, HhH motif KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 SRM_RS08950 7ae177f19c8f4953c76798fadd267bac 373 Gene3D G3DSA:3.30.1490.100 258 362 7.5E-33 T 22-04-2016 IPR017961 DNA polymerase, Y-family, little finger domain GO:0003684|GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 SRM_RS08950 7ae177f19c8f4953c76798fadd267bac 373 Hamap MF_01113 DNA polymerase IV [dinB]. 18 369 38.857 T 22-04-2016 IPR022880 DNA polymerase IV GO:0003887 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 SRM_RS05710 8995de97c0c9b608617f3065c77afe5b 1186 PANTHER PTHR18937 678 1186 5.1E-242 T 22-04-2016 SRM_RS05710 8995de97c0c9b608617f3065c77afe5b 1186 PANTHER PTHR18937 1 519 5.1E-242 T 22-04-2016 SRM_RS05710 8995de97c0c9b608617f3065c77afe5b 1186 PANTHER PTHR18937 539 662 5.1E-242 T 22-04-2016 SRM_RS05710 8995de97c0c9b608617f3065c77afe5b 1186 Pfam PF02463 RecF/RecN/SMC N terminal domain 2 1171 7.5E-59 T 22-04-2016 IPR003395 RecF/RecN/SMC, N-terminal SRM_RS05710 8995de97c0c9b608617f3065c77afe5b 1186 PANTHER PTHR18937:SF261 678 1186 5.1E-242 T 22-04-2016 SRM_RS05710 8995de97c0c9b608617f3065c77afe5b 1186 PANTHER PTHR18937:SF261 1 519 5.1E-242 T 22-04-2016 SRM_RS05710 8995de97c0c9b608617f3065c77afe5b 1186 PANTHER PTHR18937:SF261 539 662 5.1E-242 T 22-04-2016 SRM_RS05710 8995de97c0c9b608617f3065c77afe5b 1186 Gene3D G3DSA:3.40.50.300 1 163 3.6E-71 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SRM_RS05710 8995de97c0c9b608617f3065c77afe5b 1186 Gene3D G3DSA:3.40.50.300 1026 1182 3.6E-71 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SRM_RS05710 8995de97c0c9b608617f3065c77afe5b 1186 Pfam PF06470 SMC proteins Flexible Hinge Domain 523 632 1.9E-20 T 22-04-2016 IPR010935 SMCs flexible hinge GO:0005515|GO:0005524|GO:0005694|GO:0051276 SRM_RS05710 8995de97c0c9b608617f3065c77afe5b 1186 Hamap MF_01894 Chromosome partition protein Smc [smc]. 1 1180 23.588 T 22-04-2016 IPR011890 Structural maintenance of chromosomes protein, prokaryotic GO:0007062|GO:0030261 SRM_RS05710 8995de97c0c9b608617f3065c77afe5b 1186 SUPERFAMILY SSF75553 476 686 1.18E-24 T 22-04-2016 IPR010935 SMCs flexible hinge GO:0005515|GO:0005524|GO:0005694|GO:0051276 SRM_RS05710 8995de97c0c9b608617f3065c77afe5b 1186 PIRSF PIRSF005719 1 1186 3.6E-277 T 22-04-2016 IPR024704 Structural maintenance of chromosomes protein SRM_RS05710 8995de97c0c9b608617f3065c77afe5b 1186 SMART SM00968 519 632 3.2E-17 T 22-04-2016 IPR010935 SMCs flexible hinge GO:0005515|GO:0005524|GO:0005694|GO:0051276 SRM_RS05710 8995de97c0c9b608617f3065c77afe5b 1186 SUPERFAMILY SSF52540 1077 1164 7.91E-50 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SRM_RS05710 8995de97c0c9b608617f3065c77afe5b 1186 SUPERFAMILY SSF52540 1 200 7.91E-50 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SRM_RS05710 8995de97c0c9b608617f3065c77afe5b 1186 TIGRFAM TIGR02168 SMC_prok_B: chromosome segregation protein SMC 2 1177 0.0 T 22-04-2016 IPR011890 Structural maintenance of chromosomes protein, prokaryotic GO:0007062|GO:0030261 SRM_RS11800 c44fa875396ca1bdca879675cdfbef1b 164 ProDom PD016147 LIGASE LYASE CITRATE PRO-3S-LYASE SYNTHETASE TRANSFERASE CYTIDYLTRANSFERASE-RELATED:CITRATE ACETATE:SH-CITRATE CITC PLASMID 13 139 1.0E-4 T 22-04-2016 SRM_RS11800 c44fa875396ca1bdca879675cdfbef1b 164 SUPERFAMILY SSF52374 5 158 1.94E-40 T 22-04-2016 SRM_RS11800 c44fa875396ca1bdca879675cdfbef1b 164 TIGRFAM TIGR00125 cyt_tran_rel: cytidyltransferase-like domain 6 63 9.1E-15 T 22-04-2016 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 SRM_RS11800 c44fa875396ca1bdca879675cdfbef1b 164 Hamap MF_00151 Phosphopantetheine adenylyltransferase [coaD]. 4 160 32.638 T 22-04-2016 IPR001980 Coenzyme A biosynthesis protein GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|UniPathway: UPA00241 SRM_RS11800 c44fa875396ca1bdca879675cdfbef1b 164 Gene3D G3DSA:3.40.50.620 6 159 2.8E-49 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold SRM_RS11800 c44fa875396ca1bdca879675cdfbef1b 164 TIGRFAM TIGR01510 coaD_prev_kdtB: pantetheine-phosphate adenylyltransferase 6 158 1.8E-55 T 22-04-2016 IPR001980 Coenzyme A biosynthesis protein GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|UniPathway: UPA00241 SRM_RS11800 c44fa875396ca1bdca879675cdfbef1b 164 Pfam PF01467 Cytidylyltransferase-like 7 135 1.9E-20 T 22-04-2016 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 SRM_RS11800 c44fa875396ca1bdca879675cdfbef1b 164 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 22 43 2.5E-40 T 22-04-2016 IPR001980 Coenzyme A biosynthesis protein GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|UniPathway: UPA00241 SRM_RS11800 c44fa875396ca1bdca879675cdfbef1b 164 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 51 75 2.5E-40 T 22-04-2016 IPR001980 Coenzyme A biosynthesis protein GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|UniPathway: UPA00241 SRM_RS11800 c44fa875396ca1bdca879675cdfbef1b 164 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 87 103 2.5E-40 T 22-04-2016 IPR001980 Coenzyme A biosynthesis protein GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|UniPathway: UPA00241 SRM_RS11800 c44fa875396ca1bdca879675cdfbef1b 164 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 114 136 2.5E-40 T 22-04-2016 IPR001980 Coenzyme A biosynthesis protein GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|UniPathway: UPA00241 SRM_RS11800 c44fa875396ca1bdca879675cdfbef1b 164 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 4 22 2.5E-40 T 22-04-2016 IPR001980 Coenzyme A biosynthesis protein GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|UniPathway: UPA00241 SRM_RS03720 ec17e4d49dea72377086b3d7e0f77f50 385 PANTHER PTHR22926 2 385 2.3E-121 T 22-04-2016 IPR000715 Glycosyl transferase, family 4 GO:0008963|GO:0016021 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 SRM_RS03720 ec17e4d49dea72377086b3d7e0f77f50 385 PANTHER PTHR22926:SF5 2 385 2.3E-121 T 22-04-2016 SRM_RS03720 ec17e4d49dea72377086b3d7e0f77f50 385 Hamap MF_00038 Phospho-N-acetylmuramoyl-pentapeptide-transferase [mraY]. 27 383 21.14 T 22-04-2016 IPR003524 Phospho-N-acetylmuramoyl-pentapeptide transferase GO:0008963|GO:0016020 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 SRM_RS03720 ec17e4d49dea72377086b3d7e0f77f50 385 ProSitePatterns PS01347 MraY family signature 1. 73 85 - T 22-04-2016 IPR018480 Phospho-N-acetylmuramoyl-pentapeptide transferase, conserved site KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 SRM_RS03720 ec17e4d49dea72377086b3d7e0f77f50 385 TIGRFAM TIGR00445 mraY: phospho-N-acetylmuramoyl-pentapeptide-transferase 44 385 2.0E-94 T 22-04-2016 IPR003524 Phospho-N-acetylmuramoyl-pentapeptide transferase GO:0008963|GO:0016020 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 SRM_RS03720 ec17e4d49dea72377086b3d7e0f77f50 385 Pfam PF00953 Glycosyl transferase family 4 104 302 6.0E-32 T 22-04-2016 IPR000715 Glycosyl transferase, family 4 GO:0008963|GO:0016021 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 SRM_RS03720 ec17e4d49dea72377086b3d7e0f77f50 385 Pfam PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 73 85 1.4E-5 T 22-04-2016 IPR018480 Phospho-N-acetylmuramoyl-pentapeptide transferase, conserved site KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 SRM_RS03720 ec17e4d49dea72377086b3d7e0f77f50 385 ProSitePatterns PS01348 MraY family signature 2. 208 219 - T 22-04-2016 IPR018480 Phospho-N-acetylmuramoyl-pentapeptide transferase, conserved site KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 SRM_RS03935 d33ec1581357a91e7daa41b82cf52345 413 Gene3D G3DSA:1.10.150.130 128 208 3.0E-6 T 22-04-2016 IPR023109 Integrase/recombinase, N-terminal SRM_RS03935 d33ec1581357a91e7daa41b82cf52345 413 SUPERFAMILY SSF56349 121 405 9.42E-39 T 22-04-2016 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 SRM_RS03935 d33ec1581357a91e7daa41b82cf52345 413 Pfam PF00589 Phage integrase family 220 397 9.8E-22 T 22-04-2016 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 SRM_RS03935 d33ec1581357a91e7daa41b82cf52345 413 Gene3D G3DSA:1.10.443.10 220 404 6.0E-27 T 22-04-2016 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 SRM_RS03935 d33ec1581357a91e7daa41b82cf52345 413 Pfam PF13102 Phage integrase SAM-like domain 8 170 1.5E-29 T 22-04-2016 IPR025269 Phage integrase SAM-like domain SRM_RS03935 d33ec1581357a91e7daa41b82cf52345 413 PANTHER PTHR30349 41 406 4.2E-42 T 22-04-2016 SRM_RS03935 d33ec1581357a91e7daa41b82cf52345 413 PANTHER PTHR30349:SF26 41 406 4.2E-42 T 22-04-2016 SRM_RS14340 a8123078f7b0a71305071468e7cc672d 235 PANTHER PTHR28286 32 229 4.2E-13 T 22-04-2016 SRM_RS14340 a8123078f7b0a71305071468e7cc672d 235 SUPERFAMILY SSF81321 1 218 1.01E-45 T 22-04-2016 SRM_RS14340 a8123078f7b0a71305071468e7cc672d 235 Pfam PF01036 Bacteriorhodopsin-like protein 36 218 8.2E-41 T 22-04-2016 IPR001425 Archaeal/bacterial/fungal rhodopsins GO:0005216|GO:0006811|GO:0016020 SRM_RS14340 a8123078f7b0a71305071468e7cc672d 235 ProSitePatterns PS00950 Bacterial rhodopsins signature 1. 69 81 - T 22-04-2016 IPR018229 Rhodopsin, retinal binding site GO:0005216|GO:0006811|GO:0016020 SRM_RS14340 a8123078f7b0a71305071468e7cc672d 235 Gene3D G3DSA:1.20.1070.10 3 224 8.7E-41 T 22-04-2016 SRM_RS14340 a8123078f7b0a71305071468e7cc672d 235 ProSitePatterns PS00327 Bacterial rhodopsins retinal binding site. 193 204 - T 22-04-2016 IPR018229 Rhodopsin, retinal binding site GO:0005216|GO:0006811|GO:0016020 SRM_RS14340 a8123078f7b0a71305071468e7cc672d 235 PRINTS PR00251 Bacterial opsin signature 67 88 1.2E-26 T 22-04-2016 IPR001425 Archaeal/bacterial/fungal rhodopsins GO:0005216|GO:0006811|GO:0016020 SRM_RS14340 a8123078f7b0a71305071468e7cc672d 235 PRINTS PR00251 Bacterial opsin signature 33 53 1.2E-26 T 22-04-2016 IPR001425 Archaeal/bacterial/fungal rhodopsins GO:0005216|GO:0006811|GO:0016020 SRM_RS14340 a8123078f7b0a71305071468e7cc672d 235 PRINTS PR00251 Bacterial opsin signature 191 209 1.2E-26 T 22-04-2016 IPR001425 Archaeal/bacterial/fungal rhodopsins GO:0005216|GO:0006811|GO:0016020 SRM_RS14340 a8123078f7b0a71305071468e7cc672d 235 PRINTS PR00251 Bacterial opsin signature 119 140 1.2E-26 T 22-04-2016 IPR001425 Archaeal/bacterial/fungal rhodopsins GO:0005216|GO:0006811|GO:0016020 SRM_RS14340 a8123078f7b0a71305071468e7cc672d 235 PRINTS PR00251 Bacterial opsin signature 160 178 1.2E-26 T 22-04-2016 IPR001425 Archaeal/bacterial/fungal rhodopsins GO:0005216|GO:0006811|GO:0016020 SRM_RS14340 a8123078f7b0a71305071468e7cc672d 235 PRINTS PR00251 Bacterial opsin signature 95 114 1.2E-26 T 22-04-2016 IPR001425 Archaeal/bacterial/fungal rhodopsins GO:0005216|GO:0006811|GO:0016020 SRM_RS14340 a8123078f7b0a71305071468e7cc672d 235 SMART SM01021 4 227 4.1E-79 T 22-04-2016 IPR001425 Archaeal/bacterial/fungal rhodopsins GO:0005216|GO:0006811|GO:0016020 SRM_RS09320 079475dcc16942b6f33ed83381163738 140 Pfam PF00582 Universal stress protein family 1 139 4.9E-20 T 22-04-2016 IPR006016 UspA GO:0006950 SRM_RS09320 079475dcc16942b6f33ed83381163738 140 SUPERFAMILY SSF52402 1 139 6.11E-23 T 22-04-2016 SRM_RS09320 079475dcc16942b6f33ed83381163738 140 Gene3D G3DSA:3.40.50.620 1 139 3.2E-23 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold SRM_RS09680 bde75aa9876bdcde6d26ef6aa4ad95f0 340 ProSitePatterns PS00470 Isocitrate and isopropylmalate dehydrogenases signature. 226 245 - T 22-04-2016 IPR019818 Isocitrate/isopropylmalate dehydrogenase, conserved site GO:0000287|GO:0016616|GO:0051287|GO:0055114 Reactome: REACT_1046 SRM_RS09680 bde75aa9876bdcde6d26ef6aa4ad95f0 340 SUPERFAMILY SSF53659 2 333 1.21E-120 T 22-04-2016 SRM_RS09680 bde75aa9876bdcde6d26ef6aa4ad95f0 340 SMART SM01329 4 330 1.1E-168 T 22-04-2016 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 SRM_RS09680 bde75aa9876bdcde6d26ef6aa4ad95f0 340 Gene3D G3DSA:3.40.718.10 2 337 7.7E-129 T 22-04-2016 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 SRM_RS09680 bde75aa9876bdcde6d26ef6aa4ad95f0 340 Pfam PF00180 Isocitrate/isopropylmalate dehydrogenase 5 329 4.3E-100 T 22-04-2016 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 SRM_RS09680 bde75aa9876bdcde6d26ef6aa4ad95f0 340 PANTHER PTHR11835 6 340 4.0E-169 T 22-04-2016 IPR001804 Isocitrate and isopropylmalate dehydrogenases family GO:0000287|GO:0016616|GO:0051287|GO:0055114 Reactome: REACT_1046 SRM_RS08425 77345840371599a9aed106d7bad16c64 276 PANTHER PTHR11040 7 276 9.7E-117 T 22-04-2016 SRM_RS08425 77345840371599a9aed106d7bad16c64 276 PANTHER PTHR11040:SF33 7 276 9.7E-117 T 22-04-2016 SRM_RS08425 77345840371599a9aed106d7bad16c64 276 Pfam PF02535 ZIP Zinc transporter 119 271 2.3E-15 T 22-04-2016 IPR003689 Zinc/iron permease GO:0016020|GO:0030001|GO:0046873|GO:0055085 SRM_RS14225 761de3b0ec13f9041659c217be8eec8b 108 Gene3D G3DSA:3.30.1310.10 1 103 2.4E-38 T 22-04-2016 IPR004401 Nucleoid-associated protein YbaB/EbfC family SRM_RS14225 761de3b0ec13f9041659c217be8eec8b 108 PIRSF PIRSF004555 1 105 1.1E-33 T 22-04-2016 IPR004401 Nucleoid-associated protein YbaB/EbfC family SRM_RS14225 761de3b0ec13f9041659c217be8eec8b 108 Pfam PF02575 YbaB/EbfC DNA-binding family 9 96 2.6E-31 T 22-04-2016 IPR004401 Nucleoid-associated protein YbaB/EbfC family SRM_RS14225 761de3b0ec13f9041659c217be8eec8b 108 Hamap MF_00274 Nucleoid-associated protein YbaB [ybaB]. 1 95 20.745 T 22-04-2016 IPR004401 Nucleoid-associated protein YbaB/EbfC family SRM_RS14225 761de3b0ec13f9041659c217be8eec8b 108 PANTHER PTHR33449:SF1 1 107 1.0E-32 T 22-04-2016 SRM_RS14225 761de3b0ec13f9041659c217be8eec8b 108 SUPERFAMILY SSF82607 3 95 1.57E-27 T 22-04-2016 IPR004401 Nucleoid-associated protein YbaB/EbfC family SRM_RS14225 761de3b0ec13f9041659c217be8eec8b 108 TIGRFAM TIGR00103 DNA_YbaB_EbfC: DNA-binding protein, YbaB/EbfC family 2 94 3.4E-24 T 22-04-2016 IPR004401 Nucleoid-associated protein YbaB/EbfC family SRM_RS14225 761de3b0ec13f9041659c217be8eec8b 108 PANTHER PTHR33449 1 107 1.0E-32 T 22-04-2016 SRM_RS06535 e97f05cd39962a31692726fff7251a75 191 PIRSF PIRSF002161 1 187 5.3E-63 T 22-04-2016 IPR002132 Ribosomal protein L5 GO:0003735|GO:0005840|GO:0006412 SRM_RS06535 e97f05cd39962a31692726fff7251a75 191 PANTHER PTHR11994 2 183 6.6E-84 T 22-04-2016 SRM_RS06535 e97f05cd39962a31692726fff7251a75 191 Pfam PF00673 ribosomal L5P family C-terminus 87 180 1.4E-38 T 22-04-2016 IPR031309 Ribosomal protein L5, C-terminal SRM_RS06535 e97f05cd39962a31692726fff7251a75 191 Hamap MF_01333_B 50S ribosomal protein L5 [rplE]. 4 182 41.434 T 22-04-2016 IPR020930 Ribosomal protein L5, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 SRM_RS06535 e97f05cd39962a31692726fff7251a75 191 Pfam PF00281 Ribosomal protein L5 27 83 1.7E-24 T 22-04-2016 IPR031310 Ribosomal protein L5, N-terminal SRM_RS06535 e97f05cd39962a31692726fff7251a75 191 Gene3D G3DSA:3.30.1440.10 5 180 2.1E-72 T 22-04-2016 IPR022803 Ribosomal protein L5 domain SRM_RS06535 e97f05cd39962a31692726fff7251a75 191 SUPERFAMILY SSF55282 6 181 1.88E-71 T 22-04-2016 IPR022803 Ribosomal protein L5 domain SRM_RS01440 ba8397eb580583801f834126fe677374 520 Pfam PF03055 Retinal pigment epithelial membrane protein 62 519 2.8E-114 T 22-04-2016 IPR004294 Carotenoid oxygenase GO:0016702|GO:0055114 SRM_RS01440 ba8397eb580583801f834126fe677374 520 PANTHER PTHR10543 52 519 3.6E-167 T 22-04-2016 IPR004294 Carotenoid oxygenase GO:0016702|GO:0055114 SRM_RS01440 ba8397eb580583801f834126fe677374 520 PANTHER PTHR10543:SF24 52 519 3.6E-167 T 22-04-2016 SRM_RS12010 8143aedbc4ebb40c12d32be84566cf4b 603 PANTHER PTHR12815 456 584 1.8E-22 T 22-04-2016 SRM_RS12010 8143aedbc4ebb40c12d32be84566cf4b 603 PANTHER PTHR12815 82 438 1.8E-22 T 22-04-2016 SRM_RS12010 8143aedbc4ebb40c12d32be84566cf4b 603 Pfam PF07244 Surface antigen variable number repeat 116 196 1.5E-8 T 22-04-2016 IPR010827 Surface antigen variable number GO:0019867 SRM_RS12010 8143aedbc4ebb40c12d32be84566cf4b 603 Gene3D G3DSA:2.40.160.50 289 600 7.9E-11 T 22-04-2016 SRM_RS12010 8143aedbc4ebb40c12d32be84566cf4b 603 PANTHER PTHR12815:SF11 456 584 1.8E-22 T 22-04-2016 SRM_RS12010 8143aedbc4ebb40c12d32be84566cf4b 603 PANTHER PTHR12815:SF11 82 438 1.8E-22 T 22-04-2016 SRM_RS12010 8143aedbc4ebb40c12d32be84566cf4b 603 Pfam PF01103 Surface antigen 306 583 1.1E-15 T 22-04-2016 IPR000184 Bacterial surface antigen (D15) GO:0019867 SRM_RS07200 f935f570d005f883cfa59af662aa7e7b 237 PANTHER PTHR10859 7 173 1.5E-39 T 22-04-2016 SRM_RS07200 f935f570d005f883cfa59af662aa7e7b 237 PANTHER PTHR10859:SF92 7 173 1.5E-39 T 22-04-2016 SRM_RS07200 f935f570d005f883cfa59af662aa7e7b 237 Gene3D G3DSA:3.90.550.10 6 187 1.7E-26 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases SRM_RS07200 f935f570d005f883cfa59af662aa7e7b 237 Pfam PF00535 Glycosyl transferase family 2 8 132 8.0E-21 T 22-04-2016 IPR001173 Glycosyltransferase 2-like SRM_RS07200 f935f570d005f883cfa59af662aa7e7b 237 TIGRFAM TIGR04283 glyco_like_mftF: transferase 2, rSAM/selenodomain-associated 7 224 1.0E-71 T 22-04-2016 IPR026461 Transferase 2, rSAM/selenodomain-associated SRM_RS07200 f935f570d005f883cfa59af662aa7e7b 237 SUPERFAMILY SSF53448 6 208 2.56E-40 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases SRM_RS09915 98aa3d6abbc8c4e698a432fb3eed14b6 449 PRINTS PR00344 Bacterial sensor protein C-terminal signature 402 412 5.5E-16 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SRM_RS09915 98aa3d6abbc8c4e698a432fb3eed14b6 449 PRINTS PR00344 Bacterial sensor protein C-terminal signature 437 449 5.5E-16 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SRM_RS09915 98aa3d6abbc8c4e698a432fb3eed14b6 449 PRINTS PR00344 Bacterial sensor protein C-terminal signature 413 431 5.5E-16 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SRM_RS09915 98aa3d6abbc8c4e698a432fb3eed14b6 449 PRINTS PR00344 Bacterial sensor protein C-terminal signature 384 398 5.5E-16 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SRM_RS09915 98aa3d6abbc8c4e698a432fb3eed14b6 449 SMART SM00387 341 449 2.3E-28 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SRM_RS09915 98aa3d6abbc8c4e698a432fb3eed14b6 449 SUPERFAMILY SSF55874 286 449 6.02E-38 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SRM_RS09915 98aa3d6abbc8c4e698a432fb3eed14b6 449 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 341 448 3.5E-19 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SRM_RS09915 98aa3d6abbc8c4e698a432fb3eed14b6 449 Gene3D G3DSA:3.30.450.20 108 211 6.5E-6 T 22-04-2016 SRM_RS09915 98aa3d6abbc8c4e698a432fb3eed14b6 449 PANTHER PTHR24423:SF450 94 449 3.0E-66 T 22-04-2016 SRM_RS09915 98aa3d6abbc8c4e698a432fb3eed14b6 449 PANTHER PTHR24423 94 449 3.0E-66 T 22-04-2016 SRM_RS09915 98aa3d6abbc8c4e698a432fb3eed14b6 449 Gene3D G3DSA:3.30.565.10 300 449 9.6E-41 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SRM_RS03505 03128c819871ca62a4eea7a5d442385d 232 PANTHER PTHR12725:SF57 6 208 1.3E-33 T 22-04-2016 SRM_RS03505 03128c819871ca62a4eea7a5d442385d 232 Pfam PF13419 Haloacid dehalogenase-like hydrolase 8 203 3.5E-22 T 22-04-2016 IPR023214 HAD-like domain SRM_RS03505 03128c819871ca62a4eea7a5d442385d 232 PANTHER PTHR12725 6 208 1.3E-33 T 22-04-2016 SRM_RS03505 03128c819871ca62a4eea7a5d442385d 232 SUPERFAMILY SSF56784 3 229 1.22E-42 T 22-04-2016 IPR023214 HAD-like domain SRM_RS03505 03128c819871ca62a4eea7a5d442385d 232 TIGRFAM TIGR01549 HAD-SF-IA-v1: HAD hydrolase, family IA, variant 1 92 197 6.6E-12 T 22-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 SRM_RS03505 03128c819871ca62a4eea7a5d442385d 232 Gene3D G3DSA:3.40.50.1000 97 228 2.9E-32 T 22-04-2016 IPR023214 HAD-like domain SRM_RS03505 03128c819871ca62a4eea7a5d442385d 232 Gene3D G3DSA:1.10.150.240 16 96 3.3E-16 T 22-04-2016 IPR023198 Phosphoglycolate phosphatase, domain 2 SRM_RS03505 03128c819871ca62a4eea7a5d442385d 232 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 165 185 1.9E-5 T 22-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 SRM_RS03505 03128c819871ca62a4eea7a5d442385d 232 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 3 14 1.9E-5 T 22-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 SRM_RS03505 03128c819871ca62a4eea7a5d442385d 232 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 147 163 1.9E-5 T 22-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 SRM_RS03505 03128c819871ca62a4eea7a5d442385d 232 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 67 204 6.3E-8 T 22-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 SRM_RS04545 80e99a569e68845db7182e5ea49be297 435 PANTHER PTHR12737 148 285 2.5E-57 T 22-04-2016 IPR033199 Dimethylarginine dimethylaminohydrolase/arginine deiminase KEGG: 00220+3.5.3.6|MetaCyc: PWY-4981|UniPathway: UPA00254 SRM_RS04545 80e99a569e68845db7182e5ea49be297 435 PANTHER PTHR12737:SF13 400 428 2.5E-57 T 22-04-2016 SRM_RS04545 80e99a569e68845db7182e5ea49be297 435 PANTHER PTHR12737:SF13 11 109 2.5E-57 T 22-04-2016 SRM_RS04545 80e99a569e68845db7182e5ea49be297 435 PANTHER PTHR12737 11 109 2.5E-57 T 22-04-2016 IPR033199 Dimethylarginine dimethylaminohydrolase/arginine deiminase KEGG: 00220+3.5.3.6|MetaCyc: PWY-4981|UniPathway: UPA00254 SRM_RS04545 80e99a569e68845db7182e5ea49be297 435 Pfam PF02274 Amidinotransferase 32 423 1.9E-51 T 22-04-2016 SRM_RS04545 80e99a569e68845db7182e5ea49be297 435 PANTHER PTHR12737 308 376 2.5E-57 T 22-04-2016 IPR033199 Dimethylarginine dimethylaminohydrolase/arginine deiminase KEGG: 00220+3.5.3.6|MetaCyc: PWY-4981|UniPathway: UPA00254 SRM_RS04545 80e99a569e68845db7182e5ea49be297 435 PANTHER PTHR12737:SF13 148 285 2.5E-57 T 22-04-2016 SRM_RS04545 80e99a569e68845db7182e5ea49be297 435 PANTHER PTHR12737:SF13 308 376 2.5E-57 T 22-04-2016 SRM_RS04545 80e99a569e68845db7182e5ea49be297 435 SUPERFAMILY SSF55909 18 424 1.32E-73 T 22-04-2016 SRM_RS04545 80e99a569e68845db7182e5ea49be297 435 PRINTS PR01466 Bacterial arginine deiminase signature 359 373 9.5E-25 T 22-04-2016 IPR003876 Arginine deiminase GO:0006527|GO:0016990 KEGG: 00220+3.5.3.6|MetaCyc: PWY-4981|UniPathway: UPA00254 SRM_RS04545 80e99a569e68845db7182e5ea49be297 435 PRINTS PR01466 Bacterial arginine deiminase signature 176 191 9.5E-25 T 22-04-2016 IPR003876 Arginine deiminase GO:0006527|GO:0016990 KEGG: 00220+3.5.3.6|MetaCyc: PWY-4981|UniPathway: UPA00254 SRM_RS04545 80e99a569e68845db7182e5ea49be297 435 PRINTS PR01466 Bacterial arginine deiminase signature 148 166 9.5E-25 T 22-04-2016 IPR003876 Arginine deiminase GO:0006527|GO:0016990 KEGG: 00220+3.5.3.6|MetaCyc: PWY-4981|UniPathway: UPA00254 SRM_RS04545 80e99a569e68845db7182e5ea49be297 435 PRINTS PR01466 Bacterial arginine deiminase signature 339 356 9.5E-25 T 22-04-2016 IPR003876 Arginine deiminase GO:0006527|GO:0016990 KEGG: 00220+3.5.3.6|MetaCyc: PWY-4981|UniPathway: UPA00254 SRM_RS04545 80e99a569e68845db7182e5ea49be297 435 PRINTS PR01466 Bacterial arginine deiminase signature 16 36 9.5E-25 T 22-04-2016 IPR003876 Arginine deiminase GO:0006527|GO:0016990 KEGG: 00220+3.5.3.6|MetaCyc: PWY-4981|UniPathway: UPA00254 SRM_RS04545 80e99a569e68845db7182e5ea49be297 435 PANTHER PTHR12737 400 428 2.5E-57 T 22-04-2016 IPR033199 Dimethylarginine dimethylaminohydrolase/arginine deiminase KEGG: 00220+3.5.3.6|MetaCyc: PWY-4981|UniPathway: UPA00254 SRM_RS04545 80e99a569e68845db7182e5ea49be297 435 Gene3D G3DSA:3.75.10.10 148 424 7.1E-94 T 22-04-2016 SRM_RS04545 80e99a569e68845db7182e5ea49be297 435 Gene3D G3DSA:3.75.10.10 16 84 7.1E-94 T 22-04-2016 SRM_RS10315 d27bc881bf438a2a6107da202ed94125 345 Pfam PF03308 ArgK protein 37 308 3.1E-97 T 22-04-2016 SRM_RS10315 d27bc881bf438a2a6107da202ed94125 345 SUPERFAMILY SSF52540 22 340 2.22E-87 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SRM_RS10315 d27bc881bf438a2a6107da202ed94125 345 PANTHER PTHR23408:SF17 13 342 1.1E-157 T 22-04-2016 SRM_RS10315 d27bc881bf438a2a6107da202ed94125 345 TIGRFAM TIGR00750 lao: LAO/AO transport system ATPase 32 337 2.5E-96 T 22-04-2016 IPR005129 SIMIBI class G3E GTPase, ArgK/MeaB GO:0003924|GO:0005525 SRM_RS10315 d27bc881bf438a2a6107da202ed94125 345 Gene3D G3DSA:1.20.5.170 9 70 4.6E-22 T 22-04-2016 SRM_RS10315 d27bc881bf438a2a6107da202ed94125 345 PANTHER PTHR23408 13 342 1.1E-157 T 22-04-2016 SRM_RS10315 d27bc881bf438a2a6107da202ed94125 345 Gene3D G3DSA:3.40.50.300 71 274 2.9E-48 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SRM_RS15420 bd3a38b74ec7e33d359aebafe6eeaeb7 114 PANTHER PTHR23089 2 114 7.9E-57 T 22-04-2016 IPR001310 Histidine triad (HIT) protein SRM_RS15420 bd3a38b74ec7e33d359aebafe6eeaeb7 114 SUPERFAMILY SSF54197 1 113 2.32E-37 T 22-04-2016 IPR011146 HIT-like domain GO:0003824 SRM_RS15420 bd3a38b74ec7e33d359aebafe6eeaeb7 114 Pfam PF01230 HIT domain 13 108 8.7E-28 T 22-04-2016 IPR001310 Histidine triad (HIT) protein SRM_RS15420 bd3a38b74ec7e33d359aebafe6eeaeb7 114 Gene3D G3DSA:3.30.428.10 2 114 1.2E-38 T 22-04-2016 IPR011146 HIT-like domain GO:0003824 SRM_RS15420 bd3a38b74ec7e33d359aebafe6eeaeb7 114 PANTHER PTHR23089:SF3 2 114 7.9E-57 T 22-04-2016 SRM_RS15420 bd3a38b74ec7e33d359aebafe6eeaeb7 114 PRINTS PR00332 Histidine triad family signature 6 22 3.9E-15 T 22-04-2016 IPR001310 Histidine triad (HIT) protein SRM_RS15420 bd3a38b74ec7e33d359aebafe6eeaeb7 114 PRINTS PR00332 Histidine triad family signature 94 104 3.9E-15 T 22-04-2016 IPR001310 Histidine triad (HIT) protein SRM_RS15420 bd3a38b74ec7e33d359aebafe6eeaeb7 114 PRINTS PR00332 Histidine triad family signature 27 45 3.9E-15 T 22-04-2016 IPR001310 Histidine triad (HIT) protein SRM_RS15420 bd3a38b74ec7e33d359aebafe6eeaeb7 114 ProSitePatterns PS00892 HIT domain signature. 87 105 - T 22-04-2016 IPR019808 Histidine triad, conserved site SRM_RS11895 40a85bd83b4f88371acd765d8ce919bc 203 Gene3D G3DSA:3.40.50.1580 2 196 3.7E-17 T 22-04-2016 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 SRM_RS11895 40a85bd83b4f88371acd765d8ce919bc 203 SUPERFAMILY SSF53167 35 187 1.96E-14 T 22-04-2016 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 SRM_RS15410 a66f9f1e4e2ef7b6cea60f9612c1660c 233 PRINTS PR00344 Bacterial sensor protein C-terminal signature 152 166 5.8E-14 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SRM_RS15410 a66f9f1e4e2ef7b6cea60f9612c1660c 233 PRINTS PR00344 Bacterial sensor protein C-terminal signature 170 180 5.8E-14 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SRM_RS15410 a66f9f1e4e2ef7b6cea60f9612c1660c 233 PRINTS PR00344 Bacterial sensor protein C-terminal signature 187 205 5.8E-14 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SRM_RS15410 a66f9f1e4e2ef7b6cea60f9612c1660c 233 PRINTS PR00344 Bacterial sensor protein C-terminal signature 211 224 5.8E-14 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SRM_RS15410 a66f9f1e4e2ef7b6cea60f9612c1660c 233 SUPERFAMILY SSF47384 6 61 2.55E-5 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SRM_RS15410 a66f9f1e4e2ef7b6cea60f9612c1660c 233 PANTHER PTHR24423 13 224 2.5E-49 T 22-04-2016 SRM_RS15410 a66f9f1e4e2ef7b6cea60f9612c1660c 233 SMART SM00387 115 227 1.8E-29 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SRM_RS15410 a66f9f1e4e2ef7b6cea60f9612c1660c 233 Gene3D G3DSA:1.10.287.130 5 61 2.2E-4 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SRM_RS15410 a66f9f1e4e2ef7b6cea60f9612c1660c 233 Pfam PF00512 His Kinase A (phospho-acceptor) domain 5 65 3.2E-6 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SRM_RS15410 a66f9f1e4e2ef7b6cea60f9612c1660c 233 Gene3D G3DSA:3.30.565.10 73 229 1.7E-40 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SRM_RS15410 a66f9f1e4e2ef7b6cea60f9612c1660c 233 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 115 225 4.6E-22 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SRM_RS15410 a66f9f1e4e2ef7b6cea60f9612c1660c 233 SUPERFAMILY SSF55874 73 225 1.83E-37 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SRM_RS09865 238247fb7c9ca00cd8238661582b3d8d 784 PANTHER PTHR10073 135 773 8.6E-133 T 22-04-2016 SRM_RS09865 238247fb7c9ca00cd8238661582b3d8d 784 SUPERFAMILY SSF54211 342 464 6.45E-31 T 22-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold SRM_RS09865 238247fb7c9ca00cd8238661582b3d8d 784 Gene3D G3DSA:3.30.565.10 135 335 3.3E-67 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SRM_RS09865 238247fb7c9ca00cd8238661582b3d8d 784 SUPERFAMILY SSF55874 135 332 1.7E-50 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SRM_RS09865 238247fb7c9ca00cd8238661582b3d8d 784 Hamap MF_00149 DNA mismatch repair protein MutL [mutL]. 133 782 24.412 T 22-04-2016 IPR020667 DNA mismatch repair protein, MutL GO:0006298 SRM_RS09865 238247fb7c9ca00cd8238661582b3d8d 784 ProSitePatterns PS00058 DNA mismatch repair proteins mutL / hexB / PMS1 signature. 225 231 - T 22-04-2016 IPR014762 DNA mismatch repair, conserved site SRM_RS09865 238247fb7c9ca00cd8238661582b3d8d 784 SUPERFAMILY SSF118116 599 784 3.79E-44 T 22-04-2016 SRM_RS09865 238247fb7c9ca00cd8238661582b3d8d 784 Pfam PF08676 MutL C terminal dimerisation domain 604 742 9.3E-36 T 22-04-2016 IPR014790 MutL, C-terminal, dimerisation GO:0005524|GO:0006298 SRM_RS09865 238247fb7c9ca00cd8238661582b3d8d 784 Pfam PF13589 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 158 252 2.0E-8 T 22-04-2016 SRM_RS09865 238247fb7c9ca00cd8238661582b3d8d 784 SMART SM01340 346 464 1.3E-51 T 22-04-2016 IPR013507 DNA mismatch repair protein, C-terminal GO:0005524|GO:0006298|GO:0030983 SRM_RS09865 238247fb7c9ca00cd8238661582b3d8d 784 SMART SM00853 600 742 9.0E-40 T 22-04-2016 IPR014790 MutL, C-terminal, dimerisation GO:0005524|GO:0006298 SRM_RS09865 238247fb7c9ca00cd8238661582b3d8d 784 Pfam PF01119 DNA mismatch repair protein, C-terminal domain 349 463 2.2E-35 T 22-04-2016 IPR013507 DNA mismatch repair protein, C-terminal GO:0005524|GO:0006298|GO:0030983 SRM_RS09865 238247fb7c9ca00cd8238661582b3d8d 784 TIGRFAM TIGR00585 mutl: DNA mismatch repair protein MutL 135 443 3.1E-93 T 22-04-2016 IPR002099 DNA mismatch repair protein family GO:0005524|GO:0006298|GO:0030983 SRM_RS09865 238247fb7c9ca00cd8238661582b3d8d 784 Gene3D G3DSA:3.30.230.10 355 463 1.2E-34 T 22-04-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup SRM_RS04800 9fa8f27ea9c400ba1a5275d86423a484 211 PANTHER PTHR30231:SF4 7 205 8.8E-15 T 22-04-2016 SRM_RS04800 9fa8f27ea9c400ba1a5275d86423a484 211 Gene3D G3DSA:3.30.420.10 42 205 7.7E-29 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 SRM_RS04800 9fa8f27ea9c400ba1a5275d86423a484 211 Pfam PF00929 Exonuclease 42 197 1.7E-15 T 22-04-2016 IPR013520 Exonuclease, RNase T/DNA polymerase III SRM_RS04800 9fa8f27ea9c400ba1a5275d86423a484 211 SUPERFAMILY SSF53098 41 204 8.68E-27 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 SRM_RS04800 9fa8f27ea9c400ba1a5275d86423a484 211 PANTHER PTHR30231 7 205 8.8E-15 T 22-04-2016 SRM_RS04800 9fa8f27ea9c400ba1a5275d86423a484 211 SMART SM00479 40 211 3.0E-24 T 22-04-2016 IPR013520 Exonuclease, RNase T/DNA polymerase III SRM_RS14335 39d2818ebefad1002b31d5b9c91992ba 294 SUPERFAMILY SSF109604 21 228 3.14E-40 T 22-04-2016 SRM_RS14335 39d2818ebefad1002b31d5b9c91992ba 294 PANTHER PTHR33525 20 225 5.5E-29 T 22-04-2016 SRM_RS14335 39d2818ebefad1002b31d5b9c91992ba 294 Gene3D G3DSA:1.10.3150.10 21 229 1.7E-42 T 22-04-2016 IPR013976 Metal-dependent hydrolase HDOD SRM_RS14335 39d2818ebefad1002b31d5b9c91992ba 294 Pfam PF08668 HDOD domain 24 216 3.0E-35 T 22-04-2016 IPR013976 Metal-dependent hydrolase HDOD SRM_RS14335 39d2818ebefad1002b31d5b9c91992ba 294 PANTHER PTHR33525:SF3 20 225 5.5E-29 T 22-04-2016 SRM_RS00800 144a0d78e611e0e74edd8bb48820c5db 829 TIGRFAM TIGR00361 ComEC_Rec2: DNA internalization-related competence protein ComEC/Rec2 182 812 1.5E-89 T 22-04-2016 IPR004797 Competence protein ComEC/Rec2 GO:0016021|GO:0030420 SRM_RS00800 144a0d78e611e0e74edd8bb48820c5db 829 PANTHER PTHR30619:SF2 20 827 1.5E-143 T 22-04-2016 SRM_RS00800 144a0d78e611e0e74edd8bb48820c5db 829 Pfam PF00753 Metallo-beta-lactamase superfamily 576 769 4.3E-11 T 22-04-2016 IPR001279 Metallo-beta-lactamase SRM_RS00800 144a0d78e611e0e74edd8bb48820c5db 829 SUPERFAMILY SSF56281 568 823 1.27E-35 T 22-04-2016 IPR001279 Metallo-beta-lactamase SRM_RS00800 144a0d78e611e0e74edd8bb48820c5db 829 PANTHER PTHR30619 20 827 1.5E-143 T 22-04-2016 SRM_RS00800 144a0d78e611e0e74edd8bb48820c5db 829 Gene3D G3DSA:3.60.15.10 568 800 4.3E-25 T 22-04-2016 IPR001279 Metallo-beta-lactamase SRM_RS00800 144a0d78e611e0e74edd8bb48820c5db 829 Pfam PF03772 Competence protein 259 537 4.5E-64 T 22-04-2016 IPR004477 ComEC/Rec2-related protein SRM_RS00800 144a0d78e611e0e74edd8bb48820c5db 829 TIGRFAM TIGR00360 ComEC_N-term: ComEC/Rec2-related protein 281 463 2.4E-22 T 22-04-2016 IPR004477 ComEC/Rec2-related protein SRM_RS00800 144a0d78e611e0e74edd8bb48820c5db 829 Pfam PF13567 Domain of unknown function (DUF4131) 29 217 2.1E-40 T 22-04-2016 IPR025405 Domain of unknown function DUF4131 SRM_RS00800 144a0d78e611e0e74edd8bb48820c5db 829 SMART SM00849 578 783 5.5E-9 T 22-04-2016 IPR001279 Metallo-beta-lactamase SRM_RS03555 b57e5092a33e115e08238a2b67a7d2f6 256 Pfam PF03309 Type III pantothenate kinase 2 206 7.4E-49 T 22-04-2016 IPR004619 Type III pantothenate kinase GO:0004594 KEGG: 00770+2.7.1.33|MetaCyc: PWY-3961|UniPathway: UPA00241 SRM_RS03555 b57e5092a33e115e08238a2b67a7d2f6 256 PANTHER PTHR34265 1 255 8.0E-48 T 22-04-2016 SRM_RS03555 b57e5092a33e115e08238a2b67a7d2f6 256 SUPERFAMILY SSF53067 1 119 4.4E-19 T 22-04-2016 SRM_RS03555 b57e5092a33e115e08238a2b67a7d2f6 256 Gene3D G3DSA:3.30.420.40 92 255 1.2E-41 T 22-04-2016 SRM_RS03555 b57e5092a33e115e08238a2b67a7d2f6 256 Hamap MF_01274 Type III pantothenate kinase [coaX]. 1 255 26.096 T 22-04-2016 IPR004619 Type III pantothenate kinase GO:0004594 KEGG: 00770+2.7.1.33|MetaCyc: PWY-3961|UniPathway: UPA00241 SRM_RS03555 b57e5092a33e115e08238a2b67a7d2f6 256 TIGRFAM TIGR00671 baf: pantothenate kinase, type III 2 251 9.3E-45 T 22-04-2016 IPR004619 Type III pantothenate kinase GO:0004594 KEGG: 00770+2.7.1.33|MetaCyc: PWY-3961|UniPathway: UPA00241 SRM_RS03555 b57e5092a33e115e08238a2b67a7d2f6 256 SUPERFAMILY SSF53067 125 254 1.94E-31 T 22-04-2016 SRM_RS08165 e9cfe1d607dcd22096399dccba2e2a10 116 PANTHER PTHR13696 19 113 9.4E-17 T 22-04-2016 SRM_RS08165 e9cfe1d607dcd22096399dccba2e2a10 116 SUPERFAMILY SSF117916 21 114 2.58E-29 T 22-04-2016 SRM_RS08165 e9cfe1d607dcd22096399dccba2e2a10 116 Pfam PF01883 Domain of unknown function DUF59 21 91 7.2E-18 T 22-04-2016 IPR002744 Domain of unknown function DUF59 SRM_RS08165 e9cfe1d607dcd22096399dccba2e2a10 116 TIGRFAM TIGR02945 SUF_assoc: FeS assembly SUF system protein 19 116 1.1E-44 T 22-04-2016 IPR014291 SUF system FeS cluster assembly associated SRM_RS04220 572c177d25119429251f7d07ecfe5c7c 106 PANTHER PTHR34849:SF1 1 86 1.5E-28 T 22-04-2016 SRM_RS04220 572c177d25119429251f7d07ecfe5c7c 106 SUPERFAMILY SSF46689 4 78 1.22E-21 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 SRM_RS04220 572c177d25119429251f7d07ecfe5c7c 106 PANTHER PTHR34849 1 86 1.5E-28 T 22-04-2016 SRM_RS04220 572c177d25119429251f7d07ecfe5c7c 106 Pfam PF04255 Protein of unknown function (DUF433) 10 65 1.1E-18 T 22-04-2016 IPR007367 Protein of unknown function DUF433 SRM_RS04220 572c177d25119429251f7d07ecfe5c7c 106 Gene3D G3DSA:1.10.10.10 9 79 7.9E-23 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SRM_RS12105 2f9a2e2171c6d2f180c5d4bbad153620 248 Gene3D G3DSA:1.10.10.10 213 237 1.0E-5 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SRM_RS12105 2f9a2e2171c6d2f180c5d4bbad153620 248 Gene3D G3DSA:1.10.10.10 140 183 1.4E-12 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SRM_RS12105 2f9a2e2171c6d2f180c5d4bbad153620 248 Gene3D G3DSA:1.10.10.10 94 139 2.6E-9 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SRM_RS12105 2f9a2e2171c6d2f180c5d4bbad153620 248 Hamap MF_01114 Regulatory protein RecX [recX]. 74 243 16.701 T 22-04-2016 IPR003783 Regulatory protein RecX GO:0006282 SRM_RS12105 2f9a2e2171c6d2f180c5d4bbad153620 248 PANTHER PTHR33602:SF1 19 242 3.4E-45 T 22-04-2016 SRM_RS12105 2f9a2e2171c6d2f180c5d4bbad153620 248 Pfam PF02631 RecX family 116 238 4.6E-32 T 22-04-2016 IPR003783 Regulatory protein RecX GO:0006282 SRM_RS12105 2f9a2e2171c6d2f180c5d4bbad153620 248 PANTHER PTHR33602 19 242 3.4E-45 T 22-04-2016 SRM_RS02900 9060555fb4406bf726c32596376c5de4 225 ProSitePatterns PS01099 Respiratory-chain NADH dehydrogenase 24 Kd subunit signature. 138 156 - T 22-04-2016 IPR002023 NADH-quinone oxidoreductase subunit E-like GO:0016491|GO:0055114 SRM_RS02900 9060555fb4406bf726c32596376c5de4 225 SUPERFAMILY SSF52833 30 188 1.68E-49 T 22-04-2016 IPR012336 Thioredoxin-like fold SRM_RS02900 9060555fb4406bf726c32596376c5de4 225 Gene3D G3DSA:3.40.30.10 106 186 5.5E-10 T 22-04-2016 IPR012336 Thioredoxin-like fold SRM_RS02900 9060555fb4406bf726c32596376c5de4 225 TIGRFAM TIGR01958 nuoE_fam: NADH-quinone oxidoreductase, E subunit 36 181 1.4E-44 T 22-04-2016 IPR002023 NADH-quinone oxidoreductase subunit E-like GO:0016491|GO:0055114 SRM_RS02900 9060555fb4406bf726c32596376c5de4 225 PANTHER PTHR10371 29 187 2.6E-59 T 22-04-2016 SRM_RS02900 9060555fb4406bf726c32596376c5de4 225 Pfam PF01257 Thioredoxin-like [2Fe-2S] ferredoxin 38 181 2.1E-48 T 22-04-2016 SRM_RS02340 6a44c8db5415fc24d97ad971a908643e 334 SUPERFAMILY SSF53448 8 114 2.81E-11 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases SRM_RS02340 6a44c8db5415fc24d97ad971a908643e 334 Gene3D G3DSA:3.90.550.10 5 107 2.1E-7 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases SRM_RS06360 b88d5824729731948730c3b1ba5b1077 340 Gene3D G3DSA:3.20.20.70 8 340 8.5E-143 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 SRM_RS06360 b88d5824729731948730c3b1ba5b1077 340 Pfam PF00490 Delta-aminolevulinic acid dehydratase 11 337 9.9E-138 T 22-04-2016 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 SRM_RS06360 b88d5824729731948730c3b1ba5b1077 340 PIRSF PIRSF001415 1 340 1.6E-136 T 22-04-2016 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 SRM_RS06360 b88d5824729731948730c3b1ba5b1077 340 SUPERFAMILY SSF51569 7 339 2.49E-135 T 22-04-2016 SRM_RS06360 b88d5824729731948730c3b1ba5b1077 340 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 282 297 1.0E-58 T 22-04-2016 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 SRM_RS06360 b88d5824729731948730c3b1ba5b1077 340 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 195 214 1.0E-58 T 22-04-2016 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 SRM_RS06360 b88d5824729731948730c3b1ba5b1077 340 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 312 331 1.0E-58 T 22-04-2016 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 SRM_RS06360 b88d5824729731948730c3b1ba5b1077 340 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 157 176 1.0E-58 T 22-04-2016 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 SRM_RS06360 b88d5824729731948730c3b1ba5b1077 340 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 257 273 1.0E-58 T 22-04-2016 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 SRM_RS06360 b88d5824729731948730c3b1ba5b1077 340 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 127 141 1.0E-58 T 22-04-2016 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 SRM_RS06360 b88d5824729731948730c3b1ba5b1077 340 SMART SM01004 7 338 1.2E-213 T 22-04-2016 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 SRM_RS06360 b88d5824729731948730c3b1ba5b1077 340 PANTHER PTHR11458 1 340 8.2E-167 T 22-04-2016 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 SRM_RS06090 98418ced00b54367104c389307935f8f 227 Hamap MF_00664 Phosphatidylserine decarboxylase proenzyme [psd]. 1 200 30.232 T 22-04-2016 IPR033175 Phosphatidylserine decarboxylase, archaeal-type KEGG: 00564+4.1.1.65|MetaCyc: PWY-5669|UniPathway: UPA00558 SRM_RS06090 98418ced00b54367104c389307935f8f 227 Pfam PF02666 Phosphatidylserine decarboxylase 27 196 3.7E-27 T 22-04-2016 IPR003817 Phosphatidylserine decarboxylase-related GO:0004609|GO:0008654 KEGG: 00564+4.1.1.65|MetaCyc: PWY-5669|UniPathway: UPA00558 SRM_RS06090 98418ced00b54367104c389307935f8f 227 PANTHER PTHR35809 6 203 5.0E-59 T 22-04-2016 SRM_RS04815 12fd5b631064487881678a6394f2d013 847 Gene3D G3DSA:1.10.486.10 435 547 1.1E-6 T 22-04-2016 SRM_RS04815 12fd5b631064487881678a6394f2d013 847 Gene3D G3DSA:3.40.50.300 187 287 5.2E-58 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SRM_RS04815 12fd5b631064487881678a6394f2d013 847 Gene3D G3DSA:3.40.50.300 6 141 5.2E-58 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SRM_RS04815 12fd5b631064487881678a6394f2d013 847 Pfam PF13361 UvrD-like helicase C-terminal domain 432 663 6.6E-20 T 22-04-2016 IPR014017 UvrD-like DNA helicase, C-terminal GO:0005524|GO:0016787 SRM_RS04815 12fd5b631064487881678a6394f2d013 847 Pfam PF13361 UvrD-like helicase C-terminal domain 296 408 4.8E-6 T 22-04-2016 IPR014017 UvrD-like DNA helicase, C-terminal GO:0005524|GO:0016787 SRM_RS04815 12fd5b631064487881678a6394f2d013 847 SUPERFAMILY SSF52540 6 106 4.91E-106 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SRM_RS04815 12fd5b631064487881678a6394f2d013 847 SUPERFAMILY SSF52540 177 674 4.91E-106 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SRM_RS04815 12fd5b631064487881678a6394f2d013 847 Gene3D G3DSA:3.40.50.300 572 677 5.5E-48 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SRM_RS04815 12fd5b631064487881678a6394f2d013 847 Gene3D G3DSA:3.40.50.300 295 405 5.5E-48 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SRM_RS04815 12fd5b631064487881678a6394f2d013 847 PANTHER PTHR11070 435 612 6.8E-103 T 22-04-2016 IPR000212 DNA helicase, UvrD/REP type GO:0003677|GO:0004003|GO:0005524 SRM_RS04815 12fd5b631064487881678a6394f2d013 847 PANTHER PTHR11070 638 687 6.8E-103 T 22-04-2016 IPR000212 DNA helicase, UvrD/REP type GO:0003677|GO:0004003|GO:0005524 SRM_RS04815 12fd5b631064487881678a6394f2d013 847 PANTHER PTHR11070 5 415 6.8E-103 T 22-04-2016 IPR000212 DNA helicase, UvrD/REP type GO:0003677|GO:0004003|GO:0005524 SRM_RS04815 12fd5b631064487881678a6394f2d013 847 Pfam PF00580 UvrD/REP helicase N-terminal domain 7 285 9.1E-46 T 22-04-2016 IPR014016 UvrD-like Helicase, ATP-binding domain GO:0005524 SRM_RS07000 adcfbd39c4e15fae399ec0e1255aaaab 408 Pfam PF01053 Cys/Met metabolism PLP-dependent enzyme 7 379 2.9E-139 T 22-04-2016 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 SRM_RS07000 adcfbd39c4e15fae399ec0e1255aaaab 408 PANTHER PTHR11808:SF15 6 384 5.4E-177 T 22-04-2016 SRM_RS07000 adcfbd39c4e15fae399ec0e1255aaaab 408 PANTHER PTHR11808 6 384 5.4E-177 T 22-04-2016 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 SRM_RS07000 adcfbd39c4e15fae399ec0e1255aaaab 408 SUPERFAMILY SSF53383 13 380 2.79E-110 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase SRM_RS07000 adcfbd39c4e15fae399ec0e1255aaaab 408 Gene3D G3DSA:3.40.640.10 5 243 9.5E-83 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 SRM_RS07000 adcfbd39c4e15fae399ec0e1255aaaab 408 PIRSF PIRSF001434 2 383 1.0E-138 T 22-04-2016 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 SRM_RS07000 adcfbd39c4e15fae399ec0e1255aaaab 408 ProSitePatterns PS00868 Cys/Met metabolism enzymes pyridoxal-phosphate attachment site. 189 203 - T 22-04-2016 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 SRM_RS07000 adcfbd39c4e15fae399ec0e1255aaaab 408 Gene3D G3DSA:3.90.1150.10 247 382 5.7E-52 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 SRM_RS08625 554dc2054a2d26ea6cdea2480a343338 284 Gene3D G3DSA:3.90.226.10 20 279 5.5E-76 T 22-04-2016 IPR029045 ClpP/crotonase-like domain SRM_RS08625 554dc2054a2d26ea6cdea2480a343338 284 ProSitePatterns PS00166 Enoyl-CoA hydratase/isomerase signature. 122 142 - T 22-04-2016 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site GO:0003824|GO:0008152 SRM_RS08625 554dc2054a2d26ea6cdea2480a343338 284 PANTHER PTHR11941 5 278 1.9E-84 T 22-04-2016 SRM_RS08625 554dc2054a2d26ea6cdea2480a343338 284 Pfam PF00378 Enoyl-CoA hydratase/isomerase 29 280 1.4E-58 T 22-04-2016 IPR001753 Crotonase superfamily GO:0003824|GO:0008152 SRM_RS08625 554dc2054a2d26ea6cdea2480a343338 284 SUPERFAMILY SSF52096 15 280 1.46E-79 T 22-04-2016 IPR029045 ClpP/crotonase-like domain SRM_RS11825 7028e3a55ab4551bfe416a9cf4f50245 304 PANTHER PTHR11649 10 302 4.0E-117 T 22-04-2016 SRM_RS11825 7028e3a55ab4551bfe416a9cf4f50245 304 Pfam PF01926 50S ribosome-binding GTPase 20 130 1.8E-22 T 22-04-2016 IPR006073 GTP binding domain GO:0005525 SRM_RS11825 7028e3a55ab4551bfe416a9cf4f50245 304 SUPERFAMILY SSF54814 187 302 1.63E-36 T 22-04-2016 IPR009019 K homology domain, prokaryotic type GO:0003723 SRM_RS11825 7028e3a55ab4551bfe416a9cf4f50245 304 Gene3D G3DSA:3.40.50.300 12 179 5.9E-41 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SRM_RS11825 7028e3a55ab4551bfe416a9cf4f50245 304 TIGRFAM TIGR00436 era: GTP-binding protein Era 18 285 1.2E-74 T 22-04-2016 IPR005662 GTP-binding protein Era GO:0003723|GO:0005525|GO:0005622 SRM_RS11825 7028e3a55ab4551bfe416a9cf4f50245 304 PANTHER PTHR11649:SF3 10 302 4.0E-117 T 22-04-2016 SRM_RS11825 7028e3a55ab4551bfe416a9cf4f50245 304 Pfam PF07650 KH domain 213 291 9.7E-17 T 22-04-2016 IPR004044 K Homology domain, type 2 GO:0003723 SRM_RS11825 7028e3a55ab4551bfe416a9cf4f50245 304 SUPERFAMILY SSF52540 20 210 1.56E-43 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SRM_RS11825 7028e3a55ab4551bfe416a9cf4f50245 304 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 20 173 1.1E-23 T 22-04-2016 IPR005225 Small GTP-binding protein domain GO:0005525 SRM_RS11825 7028e3a55ab4551bfe416a9cf4f50245 304 Hamap MF_00367 GTPase Era [era]. 15 302 33.566 T 22-04-2016 IPR005662 GTP-binding protein Era GO:0003723|GO:0005525|GO:0005622 SRM_RS11825 7028e3a55ab4551bfe416a9cf4f50245 304 Gene3D G3DSA:3.30.300.20 193 298 1.2E-36 T 22-04-2016 IPR015946 K homology domain-like, alpha/beta SRM_RS11825 7028e3a55ab4551bfe416a9cf4f50245 304 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 69 84 1.9E-6 T 22-04-2016 IPR006073 GTP binding domain GO:0005525 SRM_RS11825 7028e3a55ab4551bfe416a9cf4f50245 304 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 20 40 1.9E-6 T 22-04-2016 IPR006073 GTP binding domain GO:0005525 SRM_RS12685 527b1c59d909036f7cacc1af1e5f76a4 346 Pfam PF16344 Domain of unknown function (DUF4974) 262 336 1.3E-8 T 22-04-2016 IPR032508 Protein FecR, C-terminal SRM_RS12685 527b1c59d909036f7cacc1af1e5f76a4 346 PIRSF PIRSF018266 14 346 5.8E-48 T 22-04-2016 IPR012373 Fe(2+)-dicitrate sensor, transmembrane component SRM_RS12685 527b1c59d909036f7cacc1af1e5f76a4 346 PANTHER PTHR30273 27 346 2.8E-41 T 22-04-2016 IPR012373 Fe(2+)-dicitrate sensor, transmembrane component SRM_RS12685 527b1c59d909036f7cacc1af1e5f76a4 346 Pfam PF04773 FecR protein 127 227 2.5E-17 T 22-04-2016 IPR006860 FecR protein SRM_RS12685 527b1c59d909036f7cacc1af1e5f76a4 346 PANTHER PTHR30273:SF2 27 346 2.8E-41 T 22-04-2016 SRM_RS11940 38d060062f8901bffa510a79592d1a7e 201 PANTHER PTHR40394 4 194 2.8E-48 T 22-04-2016 SRM_RS11940 38d060062f8901bffa510a79592d1a7e 201 Pfam PF11821 Protein of unknown function (DUF3341) 24 190 1.9E-67 T 22-04-2016 IPR021776 Protein of unknown function DUF3341 SRM_RS11940 38d060062f8901bffa510a79592d1a7e 201 PANTHER PTHR40394:SF1 4 194 2.8E-48 T 22-04-2016 SRM_RS07580 fa493dbd5a3cb29c7dfae809c4f596e5 321 Pfam PF00248 Aldo/keto reductase family 15 290 7.9E-60 T 22-04-2016 IPR023210 NADP-dependent oxidoreductase domain SRM_RS07580 fa493dbd5a3cb29c7dfae809c4f596e5 321 PANTHER PTHR11732 1 112 3.8E-153 T 22-04-2016 IPR001395 Aldo/keto reductase/potassium channel subunit beta SRM_RS07580 fa493dbd5a3cb29c7dfae809c4f596e5 321 PANTHER PTHR11732 131 316 3.8E-153 T 22-04-2016 IPR001395 Aldo/keto reductase/potassium channel subunit beta SRM_RS07580 fa493dbd5a3cb29c7dfae809c4f596e5 321 PIRSF PIRSF000097 1 312 3.4E-113 T 22-04-2016 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 SRM_RS07580 fa493dbd5a3cb29c7dfae809c4f596e5 321 ProSitePatterns PS00062 Aldo/keto reductase family signature 2. 143 160 - T 22-04-2016 IPR018170 Aldo/keto reductase, conserved site GO:0016491|GO:0055114 SRM_RS07580 fa493dbd5a3cb29c7dfae809c4f596e5 321 ProSitePatterns PS00798 Aldo/keto reductase family signature 1. 38 55 - T 22-04-2016 IPR018170 Aldo/keto reductase, conserved site GO:0016491|GO:0055114 SRM_RS07580 fa493dbd5a3cb29c7dfae809c4f596e5 321 Gene3D G3DSA:3.20.20.100 5 302 3.2E-112 T 22-04-2016 IPR023210 NADP-dependent oxidoreductase domain SRM_RS07580 fa493dbd5a3cb29c7dfae809c4f596e5 321 PRINTS PR00069 Aldo-keto reductase signature 177 206 1.1E-50 T 22-04-2016 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 SRM_RS07580 fa493dbd5a3cb29c7dfae809c4f596e5 321 PRINTS PR00069 Aldo-keto reductase signature 226 250 1.1E-50 T 22-04-2016 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 SRM_RS07580 fa493dbd5a3cb29c7dfae809c4f596e5 321 PRINTS PR00069 Aldo-keto reductase signature 143 160 1.1E-50 T 22-04-2016 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 SRM_RS07580 fa493dbd5a3cb29c7dfae809c4f596e5 321 PRINTS PR00069 Aldo-keto reductase signature 94 112 1.1E-50 T 22-04-2016 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 SRM_RS07580 fa493dbd5a3cb29c7dfae809c4f596e5 321 PRINTS PR00069 Aldo-keto reductase signature 34 58 1.1E-50 T 22-04-2016 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 SRM_RS07580 fa493dbd5a3cb29c7dfae809c4f596e5 321 SUPERFAMILY SSF51430 6 299 1.09E-96 T 22-04-2016 IPR023210 NADP-dependent oxidoreductase domain SRM_RS11780 3e6fdd7f24dcd29caaebad7b69f16e0e 284 Gene3D G3DSA:1.25.40.10 33 186 2.1E-13 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 SRM_RS11780 3e6fdd7f24dcd29caaebad7b69f16e0e 284 Pfam PF13525 Outer membrane lipoprotein 32 224 1.4E-22 T 22-04-2016 SRM_RS11780 3e6fdd7f24dcd29caaebad7b69f16e0e 284 Gene3D G3DSA:1.25.40.10 187 245 3.1E-4 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 SRM_RS11780 3e6fdd7f24dcd29caaebad7b69f16e0e 284 TIGRFAM TIGR03302 OM_YfiO: outer membrane assembly lipoprotein YfiO 7 225 4.0E-53 T 22-04-2016 IPR017689 Outer membrane protein assembly factor BamD SRM_RS11780 3e6fdd7f24dcd29caaebad7b69f16e0e 284 SMART SM00028 212 245 46.0 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 SRM_RS11780 3e6fdd7f24dcd29caaebad7b69f16e0e 284 SMART SM00028 165 198 26.0 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 SRM_RS11780 3e6fdd7f24dcd29caaebad7b69f16e0e 284 SMART SM00028 32 65 19.0 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 SRM_RS11780 3e6fdd7f24dcd29caaebad7b69f16e0e 284 PANTHER PTHR37423 9 284 4.2E-12 T 22-04-2016 SRM_RS11780 3e6fdd7f24dcd29caaebad7b69f16e0e 284 SUPERFAMILY SSF48452 228 246 7.59E-13 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 SRM_RS11780 3e6fdd7f24dcd29caaebad7b69f16e0e 284 SUPERFAMILY SSF48452 32 201 7.59E-13 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 SRM_RS14125 561bb4ee2a0da2033e51ade15d3f73cd 837 Gene3D G3DSA:2.60.40.1120 28 103 4.1E-20 T 22-04-2016 IPR014766 Carboxypeptidase, regulatory domain SRM_RS14125 561bb4ee2a0da2033e51ade15d3f73cd 837 PANTHER PTHR30069 28 219 1.2E-20 T 22-04-2016 SRM_RS14125 561bb4ee2a0da2033e51ade15d3f73cd 837 Gene3D G3DSA:2.170.130.10 140 220 1.8E-4 T 22-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 SRM_RS14125 561bb4ee2a0da2033e51ade15d3f73cd 837 SUPERFAMILY SSF49464 28 117 1.43E-19 T 22-04-2016 IPR008969 Carboxypeptidase-like, regulatory domain SRM_RS14125 561bb4ee2a0da2033e51ade15d3f73cd 837 Gene3D G3DSA:2.40.170.20 279 837 5.3E-41 T 22-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 SRM_RS14125 561bb4ee2a0da2033e51ade15d3f73cd 837 SUPERFAMILY SSF56935 123 837 4.43E-65 T 22-04-2016 SRM_RS14125 561bb4ee2a0da2033e51ade15d3f73cd 837 Pfam PF07715 TonB-dependent Receptor Plug Domain 133 220 6.9E-7 T 22-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 SRM_RS14125 561bb4ee2a0da2033e51ade15d3f73cd 837 Pfam PF00593 TonB dependent receptor 536 834 7.1E-19 T 22-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 SRM_RS14125 561bb4ee2a0da2033e51ade15d3f73cd 837 Pfam PF13715 CarboxypepD_reg-like domain 29 114 7.0E-21 T 22-04-2016 SRM_RS09415 8c3e527b2d7bc12ab622db2f045a3e05 118 ProSitePatterns PS01015 Ribosomal protein L19 signature. 87 102 - T 22-04-2016 IPR018257 Ribosomal protein L19, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 SRM_RS09415 8c3e527b2d7bc12ab622db2f045a3e05 118 TIGRFAM TIGR01024 rplS_bact: ribosomal protein bL19 5 114 4.0E-45 T 22-04-2016 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SRM_RS09415 8c3e527b2d7bc12ab622db2f045a3e05 118 SUPERFAMILY SSF50104 3 116 2.51E-43 T 22-04-2016 IPR008991 Translation protein SH3-like domain SRM_RS09415 8c3e527b2d7bc12ab622db2f045a3e05 118 PRINTS PR00061 Ribosomal protein L19 signature 65 88 2.8E-38 T 22-04-2016 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SRM_RS09415 8c3e527b2d7bc12ab622db2f045a3e05 118 PRINTS PR00061 Ribosomal protein L19 signature 5 34 2.8E-38 T 22-04-2016 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SRM_RS09415 8c3e527b2d7bc12ab622db2f045a3e05 118 PRINTS PR00061 Ribosomal protein L19 signature 35 64 2.8E-38 T 22-04-2016 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SRM_RS09415 8c3e527b2d7bc12ab622db2f045a3e05 118 Hamap MF_00402 50S ribosomal protein L19 [rplS]. 3 115 29.009 T 22-04-2016 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SRM_RS09415 8c3e527b2d7bc12ab622db2f045a3e05 118 PIRSF PIRSF002191 1 118 1.3E-45 T 22-04-2016 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SRM_RS09415 8c3e527b2d7bc12ab622db2f045a3e05 118 Pfam PF01245 Ribosomal protein L19 5 113 2.1E-46 T 22-04-2016 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SRM_RS10950 e5072e660c8460d95ac8627dce4023c3 141 SUPERFAMILY SSF49265 36 137 1.73E-15 T 22-04-2016 IPR003961 Fibronectin type III GO:0005515 SRM_RS10950 e5072e660c8460d95ac8627dce4023c3 141 SMART SM00060 39 119 1.4E-5 T 22-04-2016 IPR003961 Fibronectin type III GO:0005515 SRM_RS10950 e5072e660c8460d95ac8627dce4023c3 141 Gene3D G3DSA:2.60.40.10 41 127 3.7E-21 T 22-04-2016 IPR013783 Immunoglobulin-like fold SRM_RS00870 2a9f6daefd1c29d5bf8a3e0a608b0b86 413 SUPERFAMILY SSF52507 7 185 3.27E-56 T 22-04-2016 IPR003382 Flavoprotein GO:0003824 SRM_RS00870 2a9f6daefd1c29d5bf8a3e0a608b0b86 413 PANTHER PTHR14359 1 410 8.6E-170 T 22-04-2016 SRM_RS00870 2a9f6daefd1c29d5bf8a3e0a608b0b86 413 PANTHER PTHR14359:SF20 1 410 8.6E-170 T 22-04-2016 SRM_RS00870 2a9f6daefd1c29d5bf8a3e0a608b0b86 413 TIGRFAM TIGR00521 coaBC_dfp: phosphopantothenoylcysteine decarboxylase / phosphopantothenate--cysteine ligase 8 404 7.1E-123 T 22-04-2016 IPR005252 Coenzyme A biosynthesis bifunctional protein CoaBC GO:0004632|GO:0004633|GO:0010181|GO:0015937|GO:0015941 KEGG: 00770+4.1.1.36+6.3.2.5|UniPathway: UPA00241|UniPathway: UPA00241 SRM_RS00870 2a9f6daefd1c29d5bf8a3e0a608b0b86 413 Pfam PF02441 Flavoprotein 12 139 1.9E-35 T 22-04-2016 IPR003382 Flavoprotein GO:0003824 SRM_RS00870 2a9f6daefd1c29d5bf8a3e0a608b0b86 413 Gene3D G3DSA:3.40.50.10300 197 410 3.1E-81 T 22-04-2016 IPR007085 DNA/pantothenate metabolism flavoprotein, C-terminal KEGG: 00770+6.3.2.5|UniPathway: UPA00241 SRM_RS00870 2a9f6daefd1c29d5bf8a3e0a608b0b86 413 SUPERFAMILY SSF102645 196 407 4.05E-75 T 22-04-2016 IPR007085 DNA/pantothenate metabolism flavoprotein, C-terminal KEGG: 00770+6.3.2.5|UniPathway: UPA00241 SRM_RS00870 2a9f6daefd1c29d5bf8a3e0a608b0b86 413 Gene3D G3DSA:3.40.50.1950 7 188 3.6E-61 T 22-04-2016 IPR003382 Flavoprotein GO:0003824 SRM_RS00870 2a9f6daefd1c29d5bf8a3e0a608b0b86 413 Pfam PF04127 DNA / pantothenate metabolism flavoprotein 197 379 2.7E-69 T 22-04-2016 IPR007085 DNA/pantothenate metabolism flavoprotein, C-terminal KEGG: 00770+6.3.2.5|UniPathway: UPA00241 SRM_RS04340 95cc0bace9697b081a9bc666adbc5a56 229 SUPERFAMILY SSF82679 61 153 9.29E-18 T 22-04-2016 IPR006645 NusG, N-terminal GO:0006355 SRM_RS04340 95cc0bace9697b081a9bc666adbc5a56 229 PANTHER PTHR30265 61 224 2.8E-24 T 22-04-2016 SRM_RS04340 95cc0bace9697b081a9bc666adbc5a56 229 Gene3D G3DSA:3.30.70.940 61 153 1.2E-9 T 22-04-2016 IPR006645 NusG, N-terminal GO:0006355 SRM_RS04340 95cc0bace9697b081a9bc666adbc5a56 229 PANTHER PTHR30265:SF3 61 224 2.8E-24 T 22-04-2016 SRM_RS04340 95cc0bace9697b081a9bc666adbc5a56 229 Pfam PF02357 Transcription termination factor nusG 61 151 5.3E-15 T 22-04-2016 IPR006645 NusG, N-terminal GO:0006355 SRM_RS16015 a3530aab0b90568dbfe535da8f915d92 219 Pfam PF11667 Putative zincin peptidase 52 154 1.4E-12 T 22-04-2016 IPR021683 Putative zincin peptidase SRM_RS09580 d39ac671abf9a579a5fa1931dfad1395 533 PANTHER PTHR23115:SF69 7 183 1.7E-213 T 22-04-2016 SRM_RS09580 d39ac671abf9a579a5fa1931dfad1395 533 PANTHER PTHR23115:SF69 249 464 1.7E-213 T 22-04-2016 SRM_RS09580 d39ac671abf9a579a5fa1931dfad1395 533 SUPERFAMILY SSF54980 391 462 1.04E-15 T 22-04-2016 IPR009022 Elongation factor G, III-V domain SRM_RS09580 d39ac671abf9a579a5fa1931dfad1395 533 Pfam PF00009 Elongation factor Tu GTP binding domain 11 275 5.6E-50 T 22-04-2016 SRM_RS09580 d39ac671abf9a579a5fa1931dfad1395 533 PRINTS PR00315 GTP-binding elongation factor signature 14 27 7.4E-12 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 SRM_RS09580 d39ac671abf9a579a5fa1931dfad1395 533 PRINTS PR00315 GTP-binding elongation factor signature 100 111 7.4E-12 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 SRM_RS09580 d39ac671abf9a579a5fa1931dfad1395 533 PRINTS PR00315 GTP-binding elongation factor signature 64 72 7.4E-12 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 SRM_RS09580 d39ac671abf9a579a5fa1931dfad1395 533 PRINTS PR00315 GTP-binding elongation factor signature 84 94 7.4E-12 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 SRM_RS09580 d39ac671abf9a579a5fa1931dfad1395 533 PRINTS PR00315 GTP-binding elongation factor signature 136 145 7.4E-12 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 SRM_RS09580 d39ac671abf9a579a5fa1931dfad1395 533 SUPERFAMILY SSF50447 260 391 3.77E-27 T 22-04-2016 IPR009000 Translation protein, beta-barrel domain SRM_RS09580 d39ac671abf9a579a5fa1931dfad1395 533 Gene3D G3DSA:3.30.70.870 393 462 1.2E-12 T 22-04-2016 SRM_RS09580 d39ac671abf9a579a5fa1931dfad1395 533 Pfam PF03144 Elongation factor Tu domain 2 313 376 1.7E-8 T 22-04-2016 IPR004161 Translation elongation factor EFTu/EF1A, domain 2 GO:0005525 SRM_RS09580 d39ac671abf9a579a5fa1931dfad1395 533 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 13 152 8.2E-26 T 22-04-2016 IPR005225 Small GTP-binding protein domain GO:0005525 SRM_RS09580 d39ac671abf9a579a5fa1931dfad1395 533 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 57 72 - T 22-04-2016 IPR031157 Tr-type G domain, conserved site SRM_RS09580 d39ac671abf9a579a5fa1931dfad1395 533 PANTHER PTHR23115 7 183 1.7E-213 T 22-04-2016 SRM_RS09580 d39ac671abf9a579a5fa1931dfad1395 533 PANTHER PTHR23115 249 464 1.7E-213 T 22-04-2016 SRM_RS09580 d39ac671abf9a579a5fa1931dfad1395 533 Gene3D G3DSA:3.40.50.300 7 280 4.3E-65 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SRM_RS09580 d39ac671abf9a579a5fa1931dfad1395 533 SUPERFAMILY SSF52540 8 275 1.62E-81 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SRM_RS09580 d39ac671abf9a579a5fa1931dfad1395 533 Pfam PF16658 Class II release factor RF3, C-terminal domain 385 511 1.9E-41 T 22-04-2016 IPR032090 Peptide chain release factor 3, C-terminal SRM_RS09580 d39ac671abf9a579a5fa1931dfad1395 533 TIGRFAM TIGR00503 prfC: peptide chain release factor 3 7 526 3.9E-211 T 22-04-2016 IPR004548 Peptide chain release factor 3 GO:0005525|GO:0005737|GO:0006415|GO:0016149 SRM_RS09580 d39ac671abf9a579a5fa1931dfad1395 533 Hamap MF_00072 Peptide chain release factor 3 [prfC]. 3 524 49.327 T 22-04-2016 IPR004548 Peptide chain release factor 3 GO:0005525|GO:0005737|GO:0006415|GO:0016149 SRM_RS09580 d39ac671abf9a579a5fa1931dfad1395 533 Gene3D G3DSA:2.40.30.10 290 392 1.7E-22 T 22-04-2016 SRM_RS12140 d58111568eb7876e2d832dccd21549e6 834 Pfam PF01578 Cytochrome C assembly protein 94 319 2.1E-26 T 22-04-2016 IPR002541 Cytochrome c assembly protein GO:0017004|GO:0020037 SRM_RS12140 d58111568eb7876e2d832dccd21549e6 834 PANTHER PTHR30009:SF0 519 560 1.4E-95 T 22-04-2016 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 SRM_RS12140 d58111568eb7876e2d832dccd21549e6 834 PANTHER PTHR30009:SF0 1 442 1.4E-95 T 22-04-2016 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 SRM_RS12140 d58111568eb7876e2d832dccd21549e6 834 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 267 287 1.1E-28 T 22-04-2016 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 SRM_RS12140 d58111568eb7876e2d832dccd21549e6 834 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 233 259 1.1E-28 T 22-04-2016 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 SRM_RS12140 d58111568eb7876e2d832dccd21549e6 834 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 297 317 1.1E-28 T 22-04-2016 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 SRM_RS12140 d58111568eb7876e2d832dccd21549e6 834 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 183 205 1.1E-28 T 22-04-2016 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 SRM_RS12140 d58111568eb7876e2d832dccd21549e6 834 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 85 111 1.1E-28 T 22-04-2016 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 SRM_RS12140 d58111568eb7876e2d832dccd21549e6 834 Pfam PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal 350 562 6.2E-20 T 22-04-2016 IPR032523 Cytochrome c-type biogenesis protein CcmF, C-terminal SRM_RS12140 d58111568eb7876e2d832dccd21549e6 834 PANTHER PTHR30009 519 560 1.4E-95 T 22-04-2016 SRM_RS12140 d58111568eb7876e2d832dccd21549e6 834 PANTHER PTHR30009 1 442 1.4E-95 T 22-04-2016 SRM_RS10920 037187beae9702c8cf6890e0d568c2c0 614 SUPERFAMILY SSF51338 460 493 5.0E-17 T 22-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 SRM_RS10920 037187beae9702c8cf6890e0d568c2c0 614 SUPERFAMILY SSF51338 71 127 5.0E-17 T 22-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 SRM_RS10920 037187beae9702c8cf6890e0d568c2c0 614 Pfam PF01979 Amidohydrolase family 401 493 3.0E-12 T 22-04-2016 IPR006680 Amidohydrolase-related GO:0016787 SRM_RS10920 037187beae9702c8cf6890e0d568c2c0 614 SUPERFAMILY SSF51556 127 343 3.4E-9 T 22-04-2016 IPR032466 Metal-dependent hydrolase SRM_RS10920 037187beae9702c8cf6890e0d568c2c0 614 SUPERFAMILY SSF51556 386 461 3.4E-9 T 22-04-2016 IPR032466 Metal-dependent hydrolase SRM_RS10920 037187beae9702c8cf6890e0d568c2c0 614 Gene3D G3DSA:2.30.40.10 401 495 1.5E-18 T 22-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 SRM_RS10920 037187beae9702c8cf6890e0d568c2c0 614 Gene3D G3DSA:2.30.40.10 71 152 2.1E-17 T 22-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 SRM_RS07480 007ca9fc70e923f07f383e1eafbf3ab9 337 Pfam PF14238 Domain of unknown function (DUF4340) 76 277 7.9E-21 T 22-04-2016 IPR025641 Domain of unknown function DUF4340 SRM_RS08140 13e5ef4a3a841a9880ef77c56caa63c5 100 SMART SM00411 3 92 2.7E-35 T 22-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 SRM_RS08140 13e5ef4a3a841a9880ef77c56caa63c5 100 PANTHER PTHR33175 3 99 7.8E-36 T 22-04-2016 SRM_RS08140 13e5ef4a3a841a9880ef77c56caa63c5 100 Gene3D G3DSA:4.10.520.10 2 93 6.3E-33 T 22-04-2016 IPR010992 Integration host factor (IHF)-like DNA-binding domain GO:0003677 SRM_RS08140 13e5ef4a3a841a9880ef77c56caa63c5 100 PRINTS PR01727 Prokaryotic integration host factor signature 42 57 4.2E-11 T 22-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 SRM_RS08140 13e5ef4a3a841a9880ef77c56caa63c5 100 PRINTS PR01727 Prokaryotic integration host factor signature 76 90 4.2E-11 T 22-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 SRM_RS08140 13e5ef4a3a841a9880ef77c56caa63c5 100 PRINTS PR01727 Prokaryotic integration host factor signature 60 73 4.2E-11 T 22-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 SRM_RS08140 13e5ef4a3a841a9880ef77c56caa63c5 100 Pfam PF00216 Bacterial DNA-binding protein 3 92 3.5E-31 T 22-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 SRM_RS08140 13e5ef4a3a841a9880ef77c56caa63c5 100 SUPERFAMILY SSF47729 3 93 8.1E-29 T 22-04-2016 IPR010992 Integration host factor (IHF)-like DNA-binding domain GO:0003677 SRM_RS05520 c47aedf0159450652c03e0c01f39523c 225 Gene3D G3DSA:3.30.70.1450 156 222 6.7E-4 T 22-04-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 SRM_RS05520 c47aedf0159450652c03e0c01f39523c 225 SUPERFAMILY SSF51735 12 151 1.07E-26 T 22-04-2016 IPR016040 NAD(P)-binding domain SRM_RS05520 c47aedf0159450652c03e0c01f39523c 225 Gene3D G3DSA:3.40.50.720 12 149 1.8E-29 T 22-04-2016 IPR016040 NAD(P)-binding domain SRM_RS05520 c47aedf0159450652c03e0c01f39523c 225 SUPERFAMILY SSF116726 147 223 3.53E-7 T 22-04-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 SRM_RS05520 c47aedf0159450652c03e0c01f39523c 225 PRINTS PR00335 TrkA potassium uptake protein signature 60 70 6.2E-9 T 22-04-2016 IPR006036 Potassium uptake protein TrkA GO:0005886|GO:0006813|GO:0015079 SRM_RS05520 c47aedf0159450652c03e0c01f39523c 225 PRINTS PR00335 TrkA potassium uptake protein signature 84 98 6.2E-9 T 22-04-2016 IPR006036 Potassium uptake protein TrkA GO:0005886|GO:0006813|GO:0015079 SRM_RS05520 c47aedf0159450652c03e0c01f39523c 225 PRINTS PR00335 TrkA potassium uptake protein signature 12 26 6.2E-9 T 22-04-2016 IPR006036 Potassium uptake protein TrkA GO:0005886|GO:0006813|GO:0015079 SRM_RS05520 c47aedf0159450652c03e0c01f39523c 225 PRINTS PR00335 TrkA potassium uptake protein signature 71 81 6.2E-9 T 22-04-2016 IPR006036 Potassium uptake protein TrkA GO:0005886|GO:0006813|GO:0015079 SRM_RS05520 c47aedf0159450652c03e0c01f39523c 225 PRINTS PR00335 TrkA potassium uptake protein signature 29 43 6.2E-9 T 22-04-2016 IPR006036 Potassium uptake protein TrkA GO:0005886|GO:0006813|GO:0015079 SRM_RS05520 c47aedf0159450652c03e0c01f39523c 225 Pfam PF02080 TrkA-C domain 158 223 1.9E-7 T 22-04-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 SRM_RS05520 c47aedf0159450652c03e0c01f39523c 225 PANTHER PTHR16254 13 168 1.7E-27 T 22-04-2016 SRM_RS05520 c47aedf0159450652c03e0c01f39523c 225 Pfam PF02254 TrkA-N domain 13 114 3.0E-23 T 22-04-2016 IPR003148 Regulator of K+ conductance, N-terminal GO:0006813 SRM_RS13235 e08d96097d17a4f458e55214e2e8dcec 163 Pfam PF04248 Domain of unknown function (DUF427) 30 121 2.6E-33 T 22-04-2016 IPR007361 Domain of unknown function DUF427 SRM_RS13235 e08d96097d17a4f458e55214e2e8dcec 163 PANTHER PTHR34310 1 163 2.9E-83 T 22-04-2016 SRM_RS13235 e08d96097d17a4f458e55214e2e8dcec 163 PANTHER PTHR34310:SF2 1 163 2.9E-83 T 22-04-2016 SRM_RS10475 6443cae3ddbb931742f14b7517842772 389 PANTHER PTHR35092:SF1 113 389 8.5E-98 T 22-04-2016 SRM_RS10475 6443cae3ddbb931742f14b7517842772 389 Gene3D G3DSA:2.40.30.90 274 383 1.8E-28 T 22-04-2016 IPR023227 S-adenosyl-l-methionine hydroxide adenosyltransferase, C-terminal SRM_RS10475 6443cae3ddbb931742f14b7517842772 389 SUPERFAMILY SSF101852 279 383 4.71E-21 T 22-04-2016 IPR023227 S-adenosyl-l-methionine hydroxide adenosyltransferase, C-terminal SRM_RS10475 6443cae3ddbb931742f14b7517842772 389 PANTHER PTHR35092 113 389 8.5E-98 T 22-04-2016 SRM_RS10475 6443cae3ddbb931742f14b7517842772 389 SUPERFAMILY SSF102522 115 274 7.85E-60 T 22-04-2016 IPR023228 S-adenosyl-l-methionine hydroxide adenosyltransferase, N-terminal SRM_RS10475 6443cae3ddbb931742f14b7517842772 389 Pfam PF01887 S-adenosyl-l-methionine hydroxide adenosyltransferase 117 380 5.3E-86 T 22-04-2016 IPR002747 SAM-dependent chlorinase/fluorinase SRM_RS10490 a2a1be86f04436fbcaf0961ba0eb2f3b 439 ProSitePatterns PS01266 Adenylosuccinate synthetase GTP-binding site. 10 17 - T 22-04-2016 IPR018220 Adenylosuccinate synthase, GTP-binding site GO:0005525 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: REACT_1698|UniPathway: UPA00075 SRM_RS10490 a2a1be86f04436fbcaf0961ba0eb2f3b 439 Gene3D G3DSA:1.10.300.10 106 202 8.3E-34 T 22-04-2016 SRM_RS10490 a2a1be86f04436fbcaf0961ba0eb2f3b 439 Pfam PF00709 Adenylosuccinate synthetase 5 430 2.9E-179 T 22-04-2016 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: REACT_1698|UniPathway: UPA00075 SRM_RS10490 a2a1be86f04436fbcaf0961ba0eb2f3b 439 Hamap MF_00011 Adenylosuccinate synthetase [purA]. 1 439 193.454 T 22-04-2016 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: REACT_1698|UniPathway: UPA00075 SRM_RS10490 a2a1be86f04436fbcaf0961ba0eb2f3b 439 PANTHER PTHR11846 3 435 1.8E-240 T 22-04-2016 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: REACT_1698|UniPathway: UPA00075 SRM_RS10490 a2a1be86f04436fbcaf0961ba0eb2f3b 439 SUPERFAMILY SSF52540 1 431 1.27E-167 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SRM_RS10490 a2a1be86f04436fbcaf0961ba0eb2f3b 439 ProSitePatterns PS00513 Adenylosuccinate synthetase active site. 140 151 - T 22-04-2016 IPR033128 Adenylosuccinate synthase, active site KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|UniPathway: UPA00075 SRM_RS10490 a2a1be86f04436fbcaf0961ba0eb2f3b 439 Gene3D G3DSA:3.40.440.10 203 273 3.5E-68 T 22-04-2016 SRM_RS10490 a2a1be86f04436fbcaf0961ba0eb2f3b 439 Gene3D G3DSA:3.40.440.10 1 97 3.5E-68 T 22-04-2016 SRM_RS10490 a2a1be86f04436fbcaf0961ba0eb2f3b 439 SMART SM00788 3 431 9.4E-270 T 22-04-2016 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: REACT_1698|UniPathway: UPA00075 SRM_RS10490 a2a1be86f04436fbcaf0961ba0eb2f3b 439 Gene3D G3DSA:3.90.170.10 274 430 1.5E-68 T 22-04-2016 SRM_RS10490 a2a1be86f04436fbcaf0961ba0eb2f3b 439 TIGRFAM TIGR00184 purA: adenylosuccinate synthase 5 431 3.8E-164 T 22-04-2016 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: REACT_1698|UniPathway: UPA00075 SRM_RS06275 2b4b65001df0ff1cae291d6a2dbd0bf6 894 PANTHER PTHR38454 568 751 1.3E-12 T 22-04-2016 SRM_RS06275 2b4b65001df0ff1cae291d6a2dbd0bf6 894 PANTHER PTHR38454 769 893 1.3E-12 T 22-04-2016 SRM_RS06275 2b4b65001df0ff1cae291d6a2dbd0bf6 894 Pfam PF09586 Bacterial membrane protein YfhO 775 857 3.7E-7 T 22-04-2016 IPR018580 Uncharacterised protein family YfhO SRM_RS06275 2b4b65001df0ff1cae291d6a2dbd0bf6 894 PANTHER PTHR38454:SF1 568 751 1.3E-12 T 22-04-2016 SRM_RS06275 2b4b65001df0ff1cae291d6a2dbd0bf6 894 PANTHER PTHR38454:SF1 769 893 1.3E-12 T 22-04-2016 SRM_RS15440 b6e5a169dafaaca05f7fd236183b3341 171 Gene3D G3DSA:3.10.129.10 21 161 7.4E-33 T 22-04-2016 IPR029069 HotDog domain SRM_RS15440 b6e5a169dafaaca05f7fd236183b3341 171 Pfam PF14539 Domain of unknown function (DUF4442) 25 160 8.0E-25 T 22-04-2016 IPR027961 Protein of unknown function DUF4442 SRM_RS15440 b6e5a169dafaaca05f7fd236183b3341 171 SUPERFAMILY SSF54637 16 159 4.27E-19 T 22-04-2016 IPR029069 HotDog domain SRM_RS03725 a3ac910f4d3bf7b5dad68b1cea438474 460 Pfam PF02875 Mur ligase family, glutamate ligase domain 321 382 1.4E-6 T 22-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 SRM_RS03725 a3ac910f4d3bf7b5dad68b1cea438474 460 SUPERFAMILY SSF53244 320 458 3.66E-45 T 22-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 SRM_RS03725 a3ac910f4d3bf7b5dad68b1cea438474 460 Hamap MF_00639 UDP-N-acetylmuramoylalanine--D-glutamate ligase [murD]. 9 459 33.992 T 22-04-2016 IPR005762 UDP-N-acetylmuramoylalanine-D-glutamate ligase GO:0005524|GO:0005737|GO:0008360|GO:0008764|GO:0051301 KEGG: 00471+6.3.2.9|KEGG: 00550+6.3.2.9|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 SRM_RS03725 a3ac910f4d3bf7b5dad68b1cea438474 460 Pfam PF08245 Mur ligase middle domain 113 300 1.2E-33 T 22-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 SRM_RS03725 a3ac910f4d3bf7b5dad68b1cea438474 460 SUPERFAMILY SSF51984 6 96 3.79E-11 T 22-04-2016 SRM_RS03725 a3ac910f4d3bf7b5dad68b1cea438474 460 PANTHER PTHR23135:SF2 1 460 9.9E-151 T 22-04-2016 SRM_RS03725 a3ac910f4d3bf7b5dad68b1cea438474 460 Gene3D G3DSA:3.40.1190.10 82 118 8.8E-8 T 22-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 SRM_RS03725 a3ac910f4d3bf7b5dad68b1cea438474 460 Gene3D G3DSA:3.40.50.720 7 81 1.1E-12 T 22-04-2016 IPR016040 NAD(P)-binding domain SRM_RS03725 a3ac910f4d3bf7b5dad68b1cea438474 460 SUPERFAMILY SSF53623 99 318 6.41E-50 T 22-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 SRM_RS03725 a3ac910f4d3bf7b5dad68b1cea438474 460 Gene3D G3DSA:3.40.1190.10 119 321 4.6E-57 T 22-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 SRM_RS03725 a3ac910f4d3bf7b5dad68b1cea438474 460 TIGRFAM TIGR01087 murD: UDP-N-acetylmuramoylalanine--D-glutamate ligase 11 456 2.3E-124 T 22-04-2016 IPR005762 UDP-N-acetylmuramoylalanine-D-glutamate ligase GO:0005524|GO:0005737|GO:0008360|GO:0008764|GO:0051301 KEGG: 00471+6.3.2.9|KEGG: 00550+6.3.2.9|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 SRM_RS03725 a3ac910f4d3bf7b5dad68b1cea438474 460 PANTHER PTHR23135 1 460 9.9E-151 T 22-04-2016 SRM_RS03725 a3ac910f4d3bf7b5dad68b1cea438474 460 Gene3D G3DSA:3.90.190.20 322 455 1.3E-47 T 22-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 SRM_RS10455 2353d2456e4be9311bf1b04bb5d597a9 659 Gene3D G3DSA:3.40.50.980 99 285 8.7E-40 T 22-04-2016 SRM_RS10455 2353d2456e4be9311bf1b04bb5d597a9 659 ProSitePatterns PS00455 Putative AMP-binding domain signature. 280 291 - T 22-04-2016 IPR020845 AMP-binding, conserved site SRM_RS10455 2353d2456e4be9311bf1b04bb5d597a9 659 SUPERFAMILY SSF56801 36 655 8.9E-162 T 22-04-2016 SRM_RS10455 2353d2456e4be9311bf1b04bb5d597a9 659 Pfam PF13193 AMP-binding enzyme C-terminal domain 547 625 1.6E-20 T 22-04-2016 IPR025110 AMP-binding enzyme C-terminal domain SRM_RS10455 2353d2456e4be9311bf1b04bb5d597a9 659 PANTHER PTHR24095 27 658 2.8E-277 T 22-04-2016 SRM_RS10455 2353d2456e4be9311bf1b04bb5d597a9 659 PANTHER PTHR24095:SF184 27 658 2.8E-277 T 22-04-2016 SRM_RS10455 2353d2456e4be9311bf1b04bb5d597a9 659 Gene3D G3DSA:2.30.38.10 457 532 5.5E-10 T 22-04-2016 SRM_RS10455 2353d2456e4be9311bf1b04bb5d597a9 659 Pfam PF00501 AMP-binding enzyme 108 538 8.8E-78 T 22-04-2016 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 SRM_RS10455 2353d2456e4be9311bf1b04bb5d597a9 659 Gene3D G3DSA:3.30.300.30 533 638 4.0E-24 T 22-04-2016 SRM_RS10455 2353d2456e4be9311bf1b04bb5d597a9 659 Gene3D G3DSA:3.40.50.980 286 441 2.0E-22 T 22-04-2016 SRM_RS02430 dbc508e57e502ed26e9a60af85499c1a 255 TIGRFAM TIGR00266 TIGR00266: TIGR00266 family protein 10 220 2.5E-40 T 22-04-2016 IPR002838 Mitochondrial biogenesis protein AIM24 SRM_RS02430 dbc508e57e502ed26e9a60af85499c1a 255 Gene3D G3DSA:3.60.160.10 8 237 6.1E-96 T 22-04-2016 IPR002838 Mitochondrial biogenesis protein AIM24 SRM_RS02430 dbc508e57e502ed26e9a60af85499c1a 255 Pfam PF01987 Mitochondrial biogenesis AIM24 11 218 1.7E-70 T 22-04-2016 IPR002838 Mitochondrial biogenesis protein AIM24 SRM_RS02430 dbc508e57e502ed26e9a60af85499c1a 255 SUPERFAMILY SSF51219 9 229 2.14E-81 T 22-04-2016 IPR016031 Tryptophan RNA-binding attenuator protein-like domain SRM_RS02430 dbc508e57e502ed26e9a60af85499c1a 255 PANTHER PTHR31801:SF3 9 230 7.8E-113 T 22-04-2016 SRM_RS02430 dbc508e57e502ed26e9a60af85499c1a 255 PANTHER PTHR31801 9 230 7.8E-113 T 22-04-2016 SRM_RS05320 48eac78db382d606e9d2b101ce801afb 427 Gene3D G3DSA:3.90.79.10 5 146 1.5E-23 T 22-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 SRM_RS05320 48eac78db382d606e9d2b101ce801afb 427 PANTHER PTHR10233 148 420 3.5E-28 T 22-04-2016 SRM_RS05320 48eac78db382d606e9d2b101ce801afb 427 SUPERFAMILY SSF100950 102 422 5.53E-52 T 22-04-2016 SRM_RS05320 48eac78db382d606e9d2b101ce801afb 427 Pfam PF00293 NUDIX domain 9 128 4.8E-16 T 22-04-2016 IPR000086 NUDIX hydrolase domain GO:0016787 SRM_RS05320 48eac78db382d606e9d2b101ce801afb 427 Gene3D G3DSA:3.40.50.10470 247 422 1.3E-30 T 22-04-2016 SRM_RS05320 48eac78db382d606e9d2b101ce801afb 427 SUPERFAMILY SSF55811 6 134 2.3E-22 T 22-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 SRM_RS05320 48eac78db382d606e9d2b101ce801afb 427 Pfam PF01008 Initiation factor 2 subunit family 146 408 2.2E-40 T 22-04-2016 IPR000649 Initiation factor 2B-related GO:0044237 KEGG: 00270+5.3.1.23|MetaCyc: PWY-4361|MetaCyc: PWY-7174|UniPathway: UPA00904 SRM_RS09060 01186c5ae1f794b50a5f569c2d4c8300 218 SUPERFAMILY SSF52317 3 204 4.44E-54 T 22-04-2016 IPR029062 Class I glutamine amidotransferase-like SRM_RS09060 01186c5ae1f794b50a5f569c2d4c8300 218 PANTHER PTHR21235 4 203 4.2E-83 T 22-04-2016 SRM_RS09060 01186c5ae1f794b50a5f569c2d4c8300 218 PANTHER PTHR21235:SF1 4 203 4.2E-83 T 22-04-2016 SRM_RS09060 01186c5ae1f794b50a5f569c2d4c8300 218 PIRSF PIRSF000495 1 209 2.3E-71 T 22-04-2016 IPR010139 Imidazole glycerol phosphate synthase, subunit H GO:0000105|GO:0005737|GO:0016763 UniPathway: UPA00031 SRM_RS09060 01186c5ae1f794b50a5f569c2d4c8300 218 Hamap MF_00278 Imidazole glycerol phosphate synthase subunit HisH [hisH]. 1 206 35.0 T 22-04-2016 IPR010139 Imidazole glycerol phosphate synthase, subunit H GO:0000105|GO:0005737|GO:0016763 UniPathway: UPA00031 SRM_RS09060 01186c5ae1f794b50a5f569c2d4c8300 218 Pfam PF00117 Glutamine amidotransferase class-I 4 194 1.5E-18 T 22-04-2016 IPR017926 Glutamine amidotransferase Reactome: REACT_1698 SRM_RS09060 01186c5ae1f794b50a5f569c2d4c8300 218 Gene3D G3DSA:3.40.50.880 3 206 2.0E-77 T 22-04-2016 IPR029062 Class I glutamine amidotransferase-like SRM_RS09060 01186c5ae1f794b50a5f569c2d4c8300 218 TIGRFAM TIGR01855 IMP_synth_hisH: imidazole glycerol phosphate synthase, glutamine amidotransferase subunit 3 205 1.5E-68 T 22-04-2016 IPR010139 Imidazole glycerol phosphate synthase, subunit H GO:0000105|GO:0005737|GO:0016763 UniPathway: UPA00031 SRM_RS03345 601a22f77c35c61b9529088d79646d44 153 PANTHER PTHR41910 23 143 2.8E-26 T 22-04-2016 SRM_RS03345 601a22f77c35c61b9529088d79646d44 153 Pfam PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit 21 127 4.2E-32 T 22-04-2016 IPR000701 Succinate dehydrogenase/Fumarate reductase, transmembrane subunit GO:0016627 UniPathway: UPA00223 SRM_RS03345 601a22f77c35c61b9529088d79646d44 153 SUPERFAMILY SSF81343 25 131 8.67E-28 T 22-04-2016 SRM_RS03345 601a22f77c35c61b9529088d79646d44 153 Gene3D G3DSA:1.20.1300.10 5 131 1.0E-30 T 22-04-2016 SRM_RS03345 601a22f77c35c61b9529088d79646d44 153 TIGRFAM TIGR02970 succ_dehyd_cytB: succinate dehydrogenase, cytochrome b556 subunit 23 128 6.3E-24 T 22-04-2016 IPR014314 Succinate dehydrogenase, cytochrome b556 subunit GO:0000104|GO:0006099|GO:0045281 UniPathway: UPA00223 SRM_RS12880 3da4593e2a8f0ef3abd680b3a5f007dd 438 TIGRFAM TIGR00797 matE: MATE efflux family protein 17 409 4.4E-96 T 22-04-2016 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: REACT_15518|Reactome: REACT_20633 SRM_RS12880 3da4593e2a8f0ef3abd680b3a5f007dd 438 PIRSF PIRSF006603 2 437 1.4E-65 T 22-04-2016 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: REACT_15518|Reactome: REACT_20633 SRM_RS12880 3da4593e2a8f0ef3abd680b3a5f007dd 438 PANTHER PTHR11206:SF94 6 430 3.0E-132 T 22-04-2016 SRM_RS12880 3da4593e2a8f0ef3abd680b3a5f007dd 438 Pfam PF01554 MatE 248 388 5.6E-16 T 22-04-2016 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: REACT_15518|Reactome: REACT_20633 SRM_RS12880 3da4593e2a8f0ef3abd680b3a5f007dd 438 Pfam PF01554 MatE 17 172 3.6E-29 T 22-04-2016 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: REACT_15518|Reactome: REACT_20633 SRM_RS12880 3da4593e2a8f0ef3abd680b3a5f007dd 438 PANTHER PTHR11206 6 430 3.0E-132 T 22-04-2016 SRM_RS06130 cf07aaf29974d912b236a5b1bf054f4f 280 Pfam PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal 4 69 2.8E-16 T 22-04-2016 IPR023180 Tetrahydrodipicolinate-N-succinyltransferase, chain A, domain 1 KEGG: 00300+2.3.1.117|UniPathway: UPA00034 SRM_RS06130 cf07aaf29974d912b236a5b1bf054f4f 280 Gene3D G3DSA:2.160.10.10 95 222 2.6E-39 T 22-04-2016 SRM_RS06130 cf07aaf29974d912b236a5b1bf054f4f 280 Gene3D G3DSA:1.10.166.10 1 69 2.5E-16 T 22-04-2016 IPR023180 Tetrahydrodipicolinate-N-succinyltransferase, chain A, domain 1 KEGG: 00300+2.3.1.117|UniPathway: UPA00034 SRM_RS06130 cf07aaf29974d912b236a5b1bf054f4f 280 PANTHER PTHR19136 95 280 2.3E-36 T 22-04-2016 SRM_RS06130 cf07aaf29974d912b236a5b1bf054f4f 280 Pfam PF14602 Hexapeptide repeat of succinyl-transferase 173 207 2.2E-7 T 22-04-2016 IPR001451 Hexapeptide repeat SRM_RS06130 cf07aaf29974d912b236a5b1bf054f4f 280 PANTHER PTHR19136:SF52 95 280 2.3E-36 T 22-04-2016 IPR005664 Tetrahydrodipicolinate N-succinyltransferase, transferase hexapeptide repeat family GO:0008666|GO:0009089 KEGG: 00300+2.3.1.117|UniPathway: UPA00034 SRM_RS06130 cf07aaf29974d912b236a5b1bf054f4f 280 SUPERFAMILY SSF51161 1 241 2.36E-45 T 22-04-2016 IPR011004 Trimeric LpxA-like SRM_RS12265 5f83965d61563177d044f4d4458293fb 352 Pfam PF01551 Peptidase family M23 217 315 2.2E-28 T 22-04-2016 IPR016047 Peptidase M23 SRM_RS12265 5f83965d61563177d044f4d4458293fb 352 SUPERFAMILY SSF51261 176 319 5.23E-49 T 22-04-2016 IPR011055 Duplicated hybrid motif SRM_RS12265 5f83965d61563177d044f4d4458293fb 352 Gene3D G3DSA:2.70.70.10 169 319 1.1E-43 T 22-04-2016 SRM_RS12265 5f83965d61563177d044f4d4458293fb 352 PANTHER PTHR21666 78 329 1.2E-40 T 22-04-2016 SRM_RS00970 e5085662b347906cc60d070ca7e46940 152 PANTHER PTHR33452 1 149 1.4E-17 T 22-04-2016 SRM_RS00970 e5085662b347906cc60d070ca7e46940 152 Pfam PF07681 DoxX 14 95 1.4E-9 T 22-04-2016 IPR032808 DoxX family SRM_RS00970 e5085662b347906cc60d070ca7e46940 152 PANTHER PTHR33452:SF1 1 149 1.4E-17 T 22-04-2016 SRM_RS11715 db9e497f16b92d3f3aa0ddf8dbe4226b 536 Pfam PF01593 Flavin containing amine oxidoreductase 38 507 1.1E-35 T 22-04-2016 IPR002937 Amine oxidase GO:0016491|GO:0055114 SRM_RS11715 db9e497f16b92d3f3aa0ddf8dbe4226b 536 Gene3D G3DSA:3.50.50.60 236 319 1.0E-33 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SRM_RS11715 db9e497f16b92d3f3aa0ddf8dbe4226b 536 Gene3D G3DSA:3.50.50.60 394 405 1.0E-33 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SRM_RS11715 db9e497f16b92d3f3aa0ddf8dbe4226b 536 Gene3D G3DSA:3.50.50.60 137 151 1.0E-33 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SRM_RS11715 db9e497f16b92d3f3aa0ddf8dbe4226b 536 Gene3D G3DSA:3.50.50.60 28 84 1.0E-33 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SRM_RS11715 db9e497f16b92d3f3aa0ddf8dbe4226b 536 Gene3D G3DSA:3.50.50.60 483 509 1.0E-33 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SRM_RS11715 db9e497f16b92d3f3aa0ddf8dbe4226b 536 SUPERFAMILY SSF51905 29 344 2.02E-76 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SRM_RS11715 db9e497f16b92d3f3aa0ddf8dbe4226b 536 SUPERFAMILY SSF51905 475 507 2.02E-76 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SRM_RS11715 db9e497f16b92d3f3aa0ddf8dbe4226b 536 TIGRFAM TIGR02734 crtI_fam: phytoene desaturase 31 516 4.8E-190 T 22-04-2016 IPR014105 Carotenoid/retinoid oxidoreductase GO:0016117|GO:0055114 SRM_RS11715 db9e497f16b92d3f3aa0ddf8dbe4226b 536 PANTHER PTHR10668 31 513 7.9E-109 T 22-04-2016 SRM_RS11715 db9e497f16b92d3f3aa0ddf8dbe4226b 536 PANTHER PTHR10668:SF4 31 513 7.9E-109 T 22-04-2016 SRM_RS08315 8b4b07ee9bbf09926c0967954bd5f638 320 SUPERFAMILY SSF52540 112 291 6.49E-40 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SRM_RS08315 8b4b07ee9bbf09926c0967954bd5f638 320 SUPERFAMILY SSF52540 21 81 6.49E-40 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SRM_RS08315 8b4b07ee9bbf09926c0967954bd5f638 320 PANTHER PTHR30473 9 320 9.8E-131 T 22-04-2016 SRM_RS08315 8b4b07ee9bbf09926c0967954bd5f638 320 Pfam PF02562 PhoH-like protein 113 316 1.6E-86 T 22-04-2016 IPR003714 PhoH-like protein GO:0005524 SRM_RS08315 8b4b07ee9bbf09926c0967954bd5f638 320 Gene3D G3DSA:3.40.50.300 113 316 1.8E-79 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SRM_RS08315 8b4b07ee9bbf09926c0967954bd5f638 320 PANTHER PTHR30473:SF1 9 320 9.8E-131 T 22-04-2016 SRM_RS02565 9b365e586511abe753f5168b920955dc 484 Pfam PF00581 Rhodanese-like domain 390 476 1.5E-9 T 22-04-2016 IPR001763 Rhodanese-like domain SRM_RS02565 9b365e586511abe753f5168b920955dc 484 Pfam PF00753 Metallo-beta-lactamase superfamily 13 171 4.2E-16 T 22-04-2016 IPR001279 Metallo-beta-lactamase SRM_RS02565 9b365e586511abe753f5168b920955dc 484 SUPERFAMILY SSF56281 1 264 5.04E-52 T 22-04-2016 IPR001279 Metallo-beta-lactamase SRM_RS02565 9b365e586511abe753f5168b920955dc 484 Gene3D G3DSA:3.60.15.10 4 266 8.0E-61 T 22-04-2016 IPR001279 Metallo-beta-lactamase SRM_RS02565 9b365e586511abe753f5168b920955dc 484 PANTHER PTHR11935:SF9 371 424 1.5E-84 T 22-04-2016 SRM_RS02565 9b365e586511abe753f5168b920955dc 484 PANTHER PTHR11935:SF9 1 262 1.5E-84 T 22-04-2016 SRM_RS02565 9b365e586511abe753f5168b920955dc 484 Gene3D G3DSA:3.40.250.10 382 479 5.2E-19 T 22-04-2016 IPR001763 Rhodanese-like domain SRM_RS02565 9b365e586511abe753f5168b920955dc 484 SUPERFAMILY SSF52821 246 362 2.36E-11 T 22-04-2016 IPR001763 Rhodanese-like domain SRM_RS02565 9b365e586511abe753f5168b920955dc 484 Gene3D G3DSA:3.40.250.10 271 363 4.2E-9 T 22-04-2016 IPR001763 Rhodanese-like domain SRM_RS02565 9b365e586511abe753f5168b920955dc 484 SMART SM00849 12 203 7.7E-28 T 22-04-2016 IPR001279 Metallo-beta-lactamase SRM_RS02565 9b365e586511abe753f5168b920955dc 484 SMART SM00450 386 480 3.2E-12 T 22-04-2016 IPR001763 Rhodanese-like domain SRM_RS02565 9b365e586511abe753f5168b920955dc 484 SMART SM00450 279 379 12.0 T 22-04-2016 IPR001763 Rhodanese-like domain SRM_RS02565 9b365e586511abe753f5168b920955dc 484 PANTHER PTHR11935 371 424 1.5E-84 T 22-04-2016 SRM_RS02565 9b365e586511abe753f5168b920955dc 484 PANTHER PTHR11935 1 262 1.5E-84 T 22-04-2016 SRM_RS02565 9b365e586511abe753f5168b920955dc 484 SUPERFAMILY SSF52821 380 477 4.19E-20 T 22-04-2016 IPR001763 Rhodanese-like domain SRM_RS05635 7c1589f4b2c20c6cd181a0ba28043d56 215 SUPERFAMILY SSF52141 21 200 4.25E-23 T 22-04-2016 IPR005122 Uracil-DNA glycosylase-like SRM_RS05635 7c1589f4b2c20c6cd181a0ba28043d56 215 Gene3D G3DSA:3.40.470.10 21 200 4.8E-9 T 22-04-2016 IPR005122 Uracil-DNA glycosylase-like SRM_RS10675 280f8366fbc5ae845c926936f58b6779 431 Pfam PF01103 Surface antigen 216 315 1.2E-4 T 22-04-2016 IPR000184 Bacterial surface antigen (D15) GO:0019867 SRM_RS12335 68b93f5cf440dd4a9e88f21b41c75861 527 SUPERFAMILY SSF48452 58 527 3.04E-75 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 SRM_RS12335 68b93f5cf440dd4a9e88f21b41c75861 527 Pfam PF07980 SusD family 400 527 1.1E-27 T 22-04-2016 IPR012944 RagB/SusD domain SRM_RS12335 68b93f5cf440dd4a9e88f21b41c75861 527 Pfam PF14322 Starch-binding associating with outer membrane 68 280 3.7E-16 T 22-04-2016 SRM_RS12335 68b93f5cf440dd4a9e88f21b41c75861 527 Gene3D G3DSA:1.25.40.10 263 352 1.7E-23 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 SRM_RS12335 68b93f5cf440dd4a9e88f21b41c75861 527 Gene3D G3DSA:1.25.40.10 387 468 1.7E-23 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 SRM_RS13875 9ceec599aca270403f0eaa1e05fca3f9 452 Pfam PF01474 Class-II DAHP synthetase family 9 443 2.5E-188 T 22-04-2016 IPR002480 DAHP synthetase, class II GO:0003849|GO:0009073 KEGG: 00400+2.5.1.54|MetaCyc: PWY-6164|UniPathway: UPA00053 SRM_RS13875 9ceec599aca270403f0eaa1e05fca3f9 452 PANTHER PTHR21337 3 450 1.4E-239 T 22-04-2016 IPR002480 DAHP synthetase, class II GO:0003849|GO:0009073 KEGG: 00400+2.5.1.54|MetaCyc: PWY-6164|UniPathway: UPA00053 SRM_RS13875 9ceec599aca270403f0eaa1e05fca3f9 452 PANTHER PTHR21337:SF0 3 450 1.4E-239 T 22-04-2016 SRM_RS13875 9ceec599aca270403f0eaa1e05fca3f9 452 SUPERFAMILY SSF51569 5 448 1.32E-179 T 22-04-2016 SRM_RS13875 9ceec599aca270403f0eaa1e05fca3f9 452 TIGRFAM TIGR01358 DAHP_synth_II: 3-deoxy-7-phosphoheptulonate synthase 9 449 2.5E-196 T 22-04-2016 IPR002480 DAHP synthetase, class II GO:0003849|GO:0009073 KEGG: 00400+2.5.1.54|MetaCyc: PWY-6164|UniPathway: UPA00053 SRM_RS10025 547573c133d218b51ae25890cf9a2c1d 309 PANTHER PTHR31964:SF26 244 300 2.5E-33 T 22-04-2016 SRM_RS10025 547573c133d218b51ae25890cf9a2c1d 309 PANTHER PTHR31964:SF26 1 87 2.5E-33 T 22-04-2016 SRM_RS10025 547573c133d218b51ae25890cf9a2c1d 309 SUPERFAMILY SSF52402 157 301 1.42E-36 T 22-04-2016 SRM_RS10025 547573c133d218b51ae25890cf9a2c1d 309 Pfam PF00582 Universal stress protein family 2 145 6.4E-29 T 22-04-2016 IPR006016 UspA GO:0006950 SRM_RS10025 547573c133d218b51ae25890cf9a2c1d 309 Pfam PF00582 Universal stress protein family 157 300 1.7E-31 T 22-04-2016 IPR006016 UspA GO:0006950 SRM_RS10025 547573c133d218b51ae25890cf9a2c1d 309 PANTHER PTHR31964 244 300 2.5E-33 T 22-04-2016 SRM_RS10025 547573c133d218b51ae25890cf9a2c1d 309 PANTHER PTHR31964 1 87 2.5E-33 T 22-04-2016 SRM_RS10025 547573c133d218b51ae25890cf9a2c1d 309 SUPERFAMILY SSF52402 1 147 1.59E-33 T 22-04-2016 SRM_RS10025 547573c133d218b51ae25890cf9a2c1d 309 Gene3D G3DSA:3.40.50.620 1 147 4.5E-35 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold SRM_RS10025 547573c133d218b51ae25890cf9a2c1d 309 Gene3D G3DSA:3.40.50.620 157 300 2.1E-37 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold SRM_RS10025 547573c133d218b51ae25890cf9a2c1d 309 PRINTS PR01438 Universal stress protein signature 123 145 1.2E-15 T 22-04-2016 IPR006015 Universal stress protein A SRM_RS10025 547573c133d218b51ae25890cf9a2c1d 309 PRINTS PR01438 Universal stress protein signature 2 20 1.2E-15 T 22-04-2016 IPR006015 Universal stress protein A SRM_RS10025 547573c133d218b51ae25890cf9a2c1d 309 PRINTS PR01438 Universal stress protein signature 105 117 1.2E-15 T 22-04-2016 IPR006015 Universal stress protein A SRM_RS12735 86ecb4206f501c9a0d32fb3769c1956b 448 Pfam PF13520 Amino acid permease 15 416 2.2E-44 T 22-04-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 SRM_RS12735 86ecb4206f501c9a0d32fb3769c1956b 448 PIRSF PIRSF006060 1 447 2.0E-78 T 22-04-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 SRM_RS12735 86ecb4206f501c9a0d32fb3769c1956b 448 PANTHER PTHR11785 7 438 4.6E-79 T 22-04-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 SRM_RS01685 dc5bb85981d7f5ce1c06b1b114724fee 298 SUPERFAMILY SSF52540 3 223 9.82E-54 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SRM_RS01685 dc5bb85981d7f5ce1c06b1b114724fee 298 SMART SM00382 27 217 2.1E-11 T 22-04-2016 IPR003593 AAA+ ATPase domain SRM_RS01685 dc5bb85981d7f5ce1c06b1b114724fee 298 PANTHER PTHR24220 4 218 3.4E-98 T 22-04-2016 SRM_RS01685 dc5bb85981d7f5ce1c06b1b114724fee 298 Gene3D G3DSA:3.40.50.300 2 223 5.8E-60 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SRM_RS01685 dc5bb85981d7f5ce1c06b1b114724fee 298 Pfam PF00005 ABC transporter 19 163 8.7E-27 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 SRM_RS01685 dc5bb85981d7f5ce1c06b1b114724fee 298 PANTHER PTHR24220:SF571 4 218 3.4E-98 T 22-04-2016 SRM_RS01685 dc5bb85981d7f5ce1c06b1b114724fee 298 ProSitePatterns PS00211 ABC transporters family signature. 135 149 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 SRM_RS01005 e00e14c79e24544cfa6bd7e1117af91e 54 Pfam PF00468 Ribosomal protein L34 3 45 3.1E-23 T 22-04-2016 IPR000271 Ribosomal protein L34 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SRM_RS01005 e00e14c79e24544cfa6bd7e1117af91e 54 Hamap MF_00391 50S ribosomal protein L34 [rpmH]. 2 45 15.481 T 22-04-2016 IPR000271 Ribosomal protein L34 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SRM_RS01005 e00e14c79e24544cfa6bd7e1117af91e 54 TIGRFAM TIGR01030 rpmH_bact: ribosomal protein bL34 3 45 1.1E-22 T 22-04-2016 IPR000271 Ribosomal protein L34 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SRM_RS01005 e00e14c79e24544cfa6bd7e1117af91e 54 ProSitePatterns PS00784 Ribosomal protein L34 signature. 3 22 - T 22-04-2016 IPR020939 Ribosomal protein L34, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 SRM_RS01005 e00e14c79e24544cfa6bd7e1117af91e 54 PANTHER PTHR14503 1 47 2.0E-22 T 22-04-2016 IPR000271 Ribosomal protein L34 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SRM_RS04975 4b560803f7ed5999efa56eb04c026b45 322 Pfam PF00005 ABC transporter 21 158 3.2E-25 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 SRM_RS04975 4b560803f7ed5999efa56eb04c026b45 322 SUPERFAMILY SSF52540 3 231 7.61E-61 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SRM_RS04975 4b560803f7ed5999efa56eb04c026b45 322 ProSitePatterns PS00211 ABC transporters family signature. 132 146 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 SRM_RS04975 4b560803f7ed5999efa56eb04c026b45 322 SMART SM00382 29 234 7.0E-13 T 22-04-2016 IPR003593 AAA+ ATPase domain SRM_RS04975 4b560803f7ed5999efa56eb04c026b45 322 PANTHER PTHR24220 6 300 3.5E-84 T 22-04-2016 SRM_RS04975 4b560803f7ed5999efa56eb04c026b45 322 PANTHER PTHR24220:SF414 6 300 3.5E-84 T 22-04-2016 SRM_RS04975 4b560803f7ed5999efa56eb04c026b45 322 Gene3D G3DSA:3.40.50.300 2 230 1.7E-63 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SRM_RS14850 346d0b6d6795ade88995194e324c6765 268 PANTHER PTHR10992 10 264 2.5E-60 T 22-04-2016 SRM_RS14850 346d0b6d6795ade88995194e324c6765 268 PRINTS PR00111 Alpha/beta hydrolase fold signature 94 107 2.4E-7 T 22-04-2016 IPR000073 Alpha/beta hydrolase fold-1 SRM_RS14850 346d0b6d6795ade88995194e324c6765 268 PRINTS PR00111 Alpha/beta hydrolase fold signature 50 65 2.4E-7 T 22-04-2016 IPR000073 Alpha/beta hydrolase fold-1 SRM_RS14850 346d0b6d6795ade88995194e324c6765 268 PRINTS PR00111 Alpha/beta hydrolase fold signature 108 121 2.4E-7 T 22-04-2016 IPR000073 Alpha/beta hydrolase fold-1 SRM_RS14850 346d0b6d6795ade88995194e324c6765 268 Pfam PF12697 Alpha/beta hydrolase family 27 256 9.2E-24 T 22-04-2016 IPR000073 Alpha/beta hydrolase fold-1 SRM_RS14850 346d0b6d6795ade88995194e324c6765 268 SUPERFAMILY SSF53474 4 263 3.22E-68 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold SRM_RS14850 346d0b6d6795ade88995194e324c6765 268 PANTHER PTHR10992:SF771 10 264 2.5E-60 T 22-04-2016 SRM_RS14850 346d0b6d6795ade88995194e324c6765 268 Gene3D G3DSA:3.40.50.1820 4 266 5.8E-67 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold SRM_RS14920 4a2c8084d10dc19c2f1a4c19fcc8354e 358 PANTHER PTHR14859 155 342 2.9E-22 T 22-04-2016 IPR027317 PGAP2-interacting protein SRM_RS14920 4a2c8084d10dc19c2f1a4c19fcc8354e 358 PANTHER PTHR14859 54 137 2.9E-22 T 22-04-2016 IPR027317 PGAP2-interacting protein SRM_RS14920 4a2c8084d10dc19c2f1a4c19fcc8354e 358 Gene3D G3DSA:3.60.10.10 51 335 5.1E-18 T 22-04-2016 IPR005135 Endonuclease/exonuclease/phosphatase SRM_RS14920 4a2c8084d10dc19c2f1a4c19fcc8354e 358 Pfam PF03372 Endonuclease/Exonuclease/phosphatase family 58 328 4.5E-22 T 22-04-2016 IPR005135 Endonuclease/exonuclease/phosphatase SRM_RS14920 4a2c8084d10dc19c2f1a4c19fcc8354e 358 SUPERFAMILY SSF56219 38 339 2.22E-37 T 22-04-2016 IPR005135 Endonuclease/exonuclease/phosphatase SRM_RS14920 4a2c8084d10dc19c2f1a4c19fcc8354e 358 PANTHER PTHR14859:SF0 155 342 2.9E-22 T 22-04-2016 SRM_RS14920 4a2c8084d10dc19c2f1a4c19fcc8354e 358 PANTHER PTHR14859:SF0 54 137 2.9E-22 T 22-04-2016 SRM_RS14930 a1eac26fdacfa40fe7249f60ba5dd7eb 227 Gene3D G3DSA:3.30.1330.60 83 212 9.5E-30 T 22-04-2016 IPR006665 OmpA-like domain SRM_RS14930 a1eac26fdacfa40fe7249f60ba5dd7eb 227 PANTHER PTHR30329:SF4 99 225 6.7E-28 T 22-04-2016 SRM_RS14930 a1eac26fdacfa40fe7249f60ba5dd7eb 227 PANTHER PTHR30329 99 225 6.7E-28 T 22-04-2016 SRM_RS14930 a1eac26fdacfa40fe7249f60ba5dd7eb 227 SUPERFAMILY SSF103088 92 214 2.62E-26 T 22-04-2016 IPR006665 OmpA-like domain SRM_RS14930 a1eac26fdacfa40fe7249f60ba5dd7eb 227 Pfam PF00691 OmpA family 102 206 2.9E-20 T 22-04-2016 IPR006665 OmpA-like domain SRM_RS01850 d8f33cc6f587886f87270294b997d5f3 338 Pfam PF01370 NAD dependent epimerase/dehydratase family 7 251 3.2E-38 T 22-04-2016 IPR001509 NAD-dependent epimerase/dehydratase, N-terminal domain GO:0003824|GO:0050662 SRM_RS01850 d8f33cc6f587886f87270294b997d5f3 338 PANTHER PTHR10366:SF234 6 331 2.1E-96 T 22-04-2016 SRM_RS01850 d8f33cc6f587886f87270294b997d5f3 338 PANTHER PTHR10366 6 331 2.1E-96 T 22-04-2016 SRM_RS01850 d8f33cc6f587886f87270294b997d5f3 338 Gene3D G3DSA:3.90.25.10 224 246 4.4E-13 T 22-04-2016 SRM_RS01850 d8f33cc6f587886f87270294b997d5f3 338 Gene3D G3DSA:3.90.25.10 299 322 4.4E-13 T 22-04-2016 SRM_RS01850 d8f33cc6f587886f87270294b997d5f3 338 SUPERFAMILY SSF51735 3 323 1.66E-68 T 22-04-2016 IPR016040 NAD(P)-binding domain SRM_RS01850 d8f33cc6f587886f87270294b997d5f3 338 Gene3D G3DSA:3.40.50.720 5 223 4.7E-44 T 22-04-2016 IPR016040 NAD(P)-binding domain SRM_RS07705 afd5503229f0b6f66a43ec6ffd2c082d 221 Pfam PF13649 Methyltransferase domain 49 148 2.0E-17 T 22-04-2016 SRM_RS07705 afd5503229f0b6f66a43ec6ffd2c082d 221 PANTHER PTHR10108 15 152 9.7E-16 T 22-04-2016 SRM_RS07705 afd5503229f0b6f66a43ec6ffd2c082d 221 SUPERFAMILY SSF53335 25 162 4.95E-27 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SRM_RS07705 afd5503229f0b6f66a43ec6ffd2c082d 221 Gene3D G3DSA:3.40.50.150 12 175 8.2E-24 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SRM_RS03535 4509bb3b086fffdc4934551e7664659d 271 PANTHER PTHR10992 13 258 2.7E-46 T 22-04-2016 SRM_RS03535 4509bb3b086fffdc4934551e7664659d 271 PRINTS PR00111 Alpha/beta hydrolase fold signature 202 216 4.8E-10 T 22-04-2016 IPR000073 Alpha/beta hydrolase fold-1 SRM_RS03535 4509bb3b086fffdc4934551e7664659d 271 PRINTS PR00111 Alpha/beta hydrolase fold signature 108 121 4.8E-10 T 22-04-2016 IPR000073 Alpha/beta hydrolase fold-1 SRM_RS03535 4509bb3b086fffdc4934551e7664659d 271 PRINTS PR00111 Alpha/beta hydrolase fold signature 94 107 4.8E-10 T 22-04-2016 IPR000073 Alpha/beta hydrolase fold-1 SRM_RS03535 4509bb3b086fffdc4934551e7664659d 271 PRINTS PR00111 Alpha/beta hydrolase fold signature 53 68 4.8E-10 T 22-04-2016 IPR000073 Alpha/beta hydrolase fold-1 SRM_RS03535 4509bb3b086fffdc4934551e7664659d 271 SUPERFAMILY SSF53474 12 258 5.32E-55 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold SRM_RS03535 4509bb3b086fffdc4934551e7664659d 271 Pfam PF12697 Alpha/beta hydrolase family 29 250 9.1E-19 T 22-04-2016 IPR000073 Alpha/beta hydrolase fold-1 SRM_RS03535 4509bb3b086fffdc4934551e7664659d 271 Gene3D G3DSA:3.40.50.1820 11 257 1.3E-55 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold SRM_RS07555 dd9d6dfd38169bc719bf5bd5fc50f4e6 762 Pfam PF07244 Surface antigen variable number repeat 80 147 2.1E-5 T 22-04-2016 IPR010827 Surface antigen variable number GO:0019867 SRM_RS07555 dd9d6dfd38169bc719bf5bd5fc50f4e6 762 Pfam PF07244 Surface antigen variable number repeat 244 316 2.2E-5 T 22-04-2016 IPR010827 Surface antigen variable number GO:0019867 SRM_RS07555 dd9d6dfd38169bc719bf5bd5fc50f4e6 762 PANTHER PTHR12815 379 559 8.3E-40 T 22-04-2016 SRM_RS07555 dd9d6dfd38169bc719bf5bd5fc50f4e6 762 PANTHER PTHR12815 750 762 8.3E-40 T 22-04-2016 SRM_RS07555 dd9d6dfd38169bc719bf5bd5fc50f4e6 762 PANTHER PTHR12815 589 723 8.3E-40 T 22-04-2016 SRM_RS07555 dd9d6dfd38169bc719bf5bd5fc50f4e6 762 PANTHER PTHR12815 98 356 8.3E-40 T 22-04-2016 SRM_RS07555 dd9d6dfd38169bc719bf5bd5fc50f4e6 762 Gene3D G3DSA:2.40.160.50 581 717 4.6E-10 T 22-04-2016 SRM_RS07555 dd9d6dfd38169bc719bf5bd5fc50f4e6 762 Pfam PF01103 Surface antigen 343 762 3.7E-33 T 22-04-2016 IPR000184 Bacterial surface antigen (D15) GO:0019867 SRM_RS07555 dd9d6dfd38169bc719bf5bd5fc50f4e6 762 PANTHER PTHR12815:SF11 750 762 8.3E-40 T 22-04-2016 SRM_RS07555 dd9d6dfd38169bc719bf5bd5fc50f4e6 762 PANTHER PTHR12815:SF11 379 559 8.3E-40 T 22-04-2016 SRM_RS07555 dd9d6dfd38169bc719bf5bd5fc50f4e6 762 PANTHER PTHR12815:SF11 589 723 8.3E-40 T 22-04-2016 SRM_RS07555 dd9d6dfd38169bc719bf5bd5fc50f4e6 762 PANTHER PTHR12815:SF11 98 356 8.3E-40 T 22-04-2016 SRM_RS06200 a623c5ccf9ae15c0091b805a72acd27d 686 Gene3D G3DSA:1.25.40.10 459 631 1.3E-9 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 SRM_RS06200 a623c5ccf9ae15c0091b805a72acd27d 686 SUPERFAMILY SSF48452 459 630 2.66E-8 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 SRM_RS01375 04e54744a027a1f42a01d2930a961f99 929 PANTHER PTHR15036 239 322 2.1E-13 T 22-04-2016 SRM_RS01375 04e54744a027a1f42a01d2930a961f99 929 TIGRFAM TIGR04183 Por_Secre_tail: Por secretion system C-terminal sorting domain 852 925 4.0E-8 T 22-04-2016 IPR026444 Secretion system C-terminal sorting domain SRM_RS01375 04e54744a027a1f42a01d2930a961f99 929 Pfam PF16184 Cadherin-like 225 321 9.0E-17 T 22-04-2016 SRM_RS01375 04e54744a027a1f42a01d2930a961f99 929 TIGRFAM TIGR01965 VCBS_repeat: VCBS repeat 399 469 7.8E-9 T 22-04-2016 IPR010221 VCBS repeat SRM_RS01375 04e54744a027a1f42a01d2930a961f99 929 PANTHER PTHR15036:SF18 239 322 2.1E-13 T 22-04-2016 SRM_RS05335 1628de98da05a177fbd937ec90cee854 101 SUPERFAMILY SSF117916 21 96 4.09E-23 T 22-04-2016 SRM_RS05335 1628de98da05a177fbd937ec90cee854 101 PANTHER PTHR11178 19 96 6.6E-23 T 22-04-2016 SRM_RS05335 1628de98da05a177fbd937ec90cee854 101 ProDom PD002830 NIFU NIFU NITROGEN-FIXING C-TERMINAL FIXATION NITROGEN NIFU-LIKE DOMAIN CLUSTER HESB/YADR/YFHF:NITROGEN-FIXING 31 95 3.0E-20 T 22-04-2016 IPR001075 NIF system FeS cluster assembly, NifU, C-terminal GO:0005506|GO:0016226|GO:0051536 SRM_RS05335 1628de98da05a177fbd937ec90cee854 101 Pfam PF01106 NifU-like domain 27 93 3.0E-26 T 22-04-2016 IPR001075 NIF system FeS cluster assembly, NifU, C-terminal GO:0005506|GO:0016226|GO:0051536 SRM_RS10955 c37ed835fe7575e3f8d895122f275aa4 1244 PANTHER PTHR33607 363 484 1.1E-29 T 22-04-2016 SRM_RS10955 c37ed835fe7575e3f8d895122f275aa4 1244 PANTHER PTHR33607 500 756 1.1E-29 T 22-04-2016 SRM_RS10955 c37ed835fe7575e3f8d895122f275aa4 1244 PANTHER PTHR33607:SF2 363 484 1.1E-29 T 22-04-2016 SRM_RS10955 c37ed835fe7575e3f8d895122f275aa4 1244 PANTHER PTHR33607:SF2 500 756 1.1E-29 T 22-04-2016 SRM_RS10955 c37ed835fe7575e3f8d895122f275aa4 1244 TIGRFAM TIGR04183 Por_Secre_tail: Por secretion system C-terminal sorting domain 1162 1241 2.1E-9 T 22-04-2016 IPR026444 Secretion system C-terminal sorting domain SRM_RS10955 c37ed835fe7575e3f8d895122f275aa4 1244 Pfam PF04231 Endonuclease I 424 585 3.2E-23 T 22-04-2016 IPR007346 Endonuclease I GO:0004518 SRM_RS10955 c37ed835fe7575e3f8d895122f275aa4 1244 SUPERFAMILY SSF141072 246 363 4.58E-10 T 22-04-2016 SRM_RS10955 c37ed835fe7575e3f8d895122f275aa4 1244 SUPERFAMILY SSF54060 372 587 1.41E-29 T 22-04-2016 SRM_RS10955 c37ed835fe7575e3f8d895122f275aa4 1244 Pfam PF13860 FlgD Ig-like domain 1168 1233 5.1E-11 T 22-04-2016 IPR025965 FlgD Ig-like domain SRM_RS02975 4f21abc551e35b9956bfcf3d4989ac83 399 Pfam PF01734 Patatin-like phospholipase 24 230 5.9E-19 T 22-04-2016 IPR002641 Patatin/Phospholipase A2-related GO:0006629 SRM_RS02975 4f21abc551e35b9956bfcf3d4989ac83 399 PANTHER PTHR14226 189 381 2.0E-35 T 22-04-2016 SRM_RS02975 4f21abc551e35b9956bfcf3d4989ac83 399 PANTHER PTHR14226 23 172 2.0E-35 T 22-04-2016 SRM_RS02975 4f21abc551e35b9956bfcf3d4989ac83 399 PANTHER PTHR14226:SF34 189 381 2.0E-35 T 22-04-2016 SRM_RS02975 4f21abc551e35b9956bfcf3d4989ac83 399 PANTHER PTHR14226:SF34 23 172 2.0E-35 T 22-04-2016 SRM_RS02975 4f21abc551e35b9956bfcf3d4989ac83 399 SUPERFAMILY SSF52151 23 292 3.92E-40 T 22-04-2016 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase GO:0008152 SRM_RS02975 4f21abc551e35b9956bfcf3d4989ac83 399 Gene3D G3DSA:3.40.1090.10 24 231 2.6E-8 T 22-04-2016 SRM_RS10085 d715cdf0f82e1d303032e8910ea2a7a8 181 PANTHER PTHR35793 1 181 2.4E-80 T 22-04-2016 SRM_RS10085 d715cdf0f82e1d303032e8910ea2a7a8 181 Pfam PF07670 Nucleoside recognition 51 151 1.6E-8 T 22-04-2016 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain Reactome: REACT_15518|Reactome: REACT_1698 SRM_RS10770 fd89952c86d2edb4804d3ee8a3ecf81a 456 Pfam PF01546 Peptidase family M20/M25/M40 83 448 6.8E-35 T 22-04-2016 IPR002933 Peptidase M20 GO:0008152|GO:0016787 SRM_RS10770 fd89952c86d2edb4804d3ee8a3ecf81a 456 PANTHER PTHR11014:SF72 6 265 1.3E-180 T 22-04-2016 SRM_RS10770 fd89952c86d2edb4804d3ee8a3ecf81a 456 PANTHER PTHR11014:SF72 283 456 1.3E-180 T 22-04-2016 SRM_RS10770 fd89952c86d2edb4804d3ee8a3ecf81a 456 SUPERFAMILY SSF53187 367 453 4.0E-64 T 22-04-2016 SRM_RS10770 fd89952c86d2edb4804d3ee8a3ecf81a 456 SUPERFAMILY SSF53187 3 196 4.0E-64 T 22-04-2016 SRM_RS10770 fd89952c86d2edb4804d3ee8a3ecf81a 456 Pfam PF07687 Peptidase dimerisation domain 193 352 6.5E-24 T 22-04-2016 IPR011650 Peptidase M20, dimerisation domain SRM_RS10770 fd89952c86d2edb4804d3ee8a3ecf81a 456 Gene3D G3DSA:3.30.70.360 196 362 8.3E-60 T 22-04-2016 IPR011650 Peptidase M20, dimerisation domain SRM_RS10770 fd89952c86d2edb4804d3ee8a3ecf81a 456 PANTHER PTHR11014 6 265 1.3E-180 T 22-04-2016 SRM_RS10770 fd89952c86d2edb4804d3ee8a3ecf81a 456 PANTHER PTHR11014 283 456 1.3E-180 T 22-04-2016 SRM_RS10770 fd89952c86d2edb4804d3ee8a3ecf81a 456 Gene3D G3DSA:3.40.630.10 5 190 3.0E-63 T 22-04-2016 SRM_RS10770 fd89952c86d2edb4804d3ee8a3ecf81a 456 Gene3D G3DSA:3.40.630.10 366 453 3.0E-63 T 22-04-2016 SRM_RS09005 fe6c46bf13b92fedd70c341779721ef5 496 Pfam PF13660 Domain of unknown function (DUF4147) 62 299 2.2E-67 T 22-04-2016 IPR025286 MOFRL-associated domain SRM_RS09005 fe6c46bf13b92fedd70c341779721ef5 496 PANTHER PTHR12227 40 494 9.8E-129 T 22-04-2016 SRM_RS09005 fe6c46bf13b92fedd70c341779721ef5 496 Gene3D G3DSA:3.40.50.10180 62 314 1.3E-76 T 22-04-2016 SRM_RS09005 fe6c46bf13b92fedd70c341779721ef5 496 Gene3D G3DSA:3.40.1480.10 315 488 6.5E-63 T 22-04-2016 IPR007835 MOFRL domain SRM_RS09005 fe6c46bf13b92fedd70c341779721ef5 496 PANTHER PTHR12227:SF0 40 494 9.8E-129 T 22-04-2016 SRM_RS09005 fe6c46bf13b92fedd70c341779721ef5 496 SUPERFAMILY SSF82544 60 488 1.57E-116 T 22-04-2016 SRM_RS09005 fe6c46bf13b92fedd70c341779721ef5 496 Pfam PF05161 MOFRL family 378 483 1.3E-38 T 22-04-2016 IPR007835 MOFRL domain SRM_RS10510 1f468264e6306c3d47a1b1d279ff7f00 284 PANTHER PTHR11614 6 284 4.6E-99 T 22-04-2016 SRM_RS10510 1f468264e6306c3d47a1b1d279ff7f00 284 Pfam PF12146 Serine aminopeptidase, S33 28 262 3.2E-83 T 22-04-2016 IPR022742 Serine aminopeptidase, S33 SRM_RS10510 1f468264e6306c3d47a1b1d279ff7f00 284 SUPERFAMILY SSF53474 7 274 3.62E-51 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold SRM_RS10510 1f468264e6306c3d47a1b1d279ff7f00 284 PANTHER PTHR11614:SF87 6 284 4.6E-99 T 22-04-2016 SRM_RS10510 1f468264e6306c3d47a1b1d279ff7f00 284 Gene3D G3DSA:3.40.50.1820 14 277 1.2E-55 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold SRM_RS14360 10c1f4a8746873f361e1e109ca3d34ef 256 SUPERFAMILY SSF52540 6 246 1.2E-39 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SRM_RS14360 10c1f4a8746873f361e1e109ca3d34ef 256 PANTHER PTHR13696 6 256 6.5E-35 T 22-04-2016 SRM_RS14360 10c1f4a8746873f361e1e109ca3d34ef 256 PANTHER PTHR13696:SF3 6 256 6.5E-35 T 22-04-2016 SRM_RS14360 10c1f4a8746873f361e1e109ca3d34ef 256 Pfam PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain 9 188 3.4E-22 T 22-04-2016 IPR002586 CobQ/CobB/MinD/ParA nucleotide binding domain SRM_RS14360 10c1f4a8746873f361e1e109ca3d34ef 256 Gene3D G3DSA:3.40.50.300 5 244 2.1E-43 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SRM_RS10210 f6d00517ccb9f6ca2399f017a154ff99 328 PANTHER PTHR10366 2 325 1.3E-104 T 22-04-2016 SRM_RS10210 f6d00517ccb9f6ca2399f017a154ff99 328 Gene3D G3DSA:3.90.25.10 170 325 8.6E-48 T 22-04-2016 SRM_RS10210 f6d00517ccb9f6ca2399f017a154ff99 328 Gene3D G3DSA:3.40.50.720 1 169 2.4E-46 T 22-04-2016 IPR016040 NAD(P)-binding domain SRM_RS10210 f6d00517ccb9f6ca2399f017a154ff99 328 PANTHER PTHR10366:SF39 2 325 1.3E-104 T 22-04-2016 SRM_RS10210 f6d00517ccb9f6ca2399f017a154ff99 328 Pfam PF01370 NAD dependent epimerase/dehydratase family 3 249 1.3E-52 T 22-04-2016 IPR001509 NAD-dependent epimerase/dehydratase, N-terminal domain GO:0003824|GO:0050662 SRM_RS10210 f6d00517ccb9f6ca2399f017a154ff99 328 SUPERFAMILY SSF51735 1 324 1.5E-90 T 22-04-2016 IPR016040 NAD(P)-binding domain SRM_RS10210 f6d00517ccb9f6ca2399f017a154ff99 328 TIGRFAM TIGR01179 galE: UDP-glucose 4-epimerase GalE 2 323 9.1E-122 T 22-04-2016 IPR005886 UDP-glucose 4-epimerase GalE GO:0003978|GO:0006012 KEGG: 00052+5.1.3.2|KEGG: 00520+5.1.3.2|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6397|MetaCyc: PWY-6527|MetaCyc: PWY-7328|MetaCyc: PWY-7344|UniPathway: UPA00214 SRM_RS05255 9f86565cb69c19b5d35e0d17fe0a91e9 360 PANTHER PTHR21535 67 360 9.5E-65 T 22-04-2016 SRM_RS05255 9f86565cb69c19b5d35e0d17fe0a91e9 360 Gene3D G3DSA:3.30.460.20 12 169 1.8E-41 T 22-04-2016 SRM_RS05255 9f86565cb69c19b5d35e0d17fe0a91e9 360 SUPERFAMILY SSF144083 295 357 1.31E-23 T 22-04-2016 SRM_RS05255 9f86565cb69c19b5d35e0d17fe0a91e9 360 TIGRFAM TIGR00383 corA: magnesium and cobalt transport protein CorA 44 360 6.9E-97 T 22-04-2016 IPR004488 Magnesium/cobalt transport protein CorA GO:0006824|GO:0015087|GO:0015095|GO:0015693|GO:0016020 SRM_RS05255 9f86565cb69c19b5d35e0d17fe0a91e9 360 Pfam PF01544 CorA-like Mg2+ transporter protein 67 356 1.2E-74 T 22-04-2016 IPR002523 Mg2+ transporter protein, CorA-like/Zinc transport protein ZntB GO:0016020|GO:0030001|GO:0046873|GO:0055085 SRM_RS05255 9f86565cb69c19b5d35e0d17fe0a91e9 360 PANTHER PTHR21535:SF33 67 360 9.5E-65 T 22-04-2016 SRM_RS05255 9f86565cb69c19b5d35e0d17fe0a91e9 360 SUPERFAMILY SSF143865 16 294 3.79E-80 T 22-04-2016 SRM_RS05255 9f86565cb69c19b5d35e0d17fe0a91e9 360 Gene3D G3DSA:1.20.58.340 284 360 6.3E-33 T 22-04-2016 SRM_RS05255 9f86565cb69c19b5d35e0d17fe0a91e9 360 Gene3D G3DSA:1.20.58.340 170 281 8.2E-39 T 22-04-2016 SRM_RS15320 b5c99068a1ee2a16352d4ee716fa80ab 200 Gene3D G3DSA:1.10.357.10 14 196 1.3E-31 T 22-04-2016 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 SRM_RS15320 b5c99068a1ee2a16352d4ee716fa80ab 200 Pfam PF00440 Bacterial regulatory proteins, tetR family 21 66 1.0E-9 T 22-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 SRM_RS15320 b5c99068a1ee2a16352d4ee716fa80ab 200 PANTHER PTHR30055:SF68 4 195 1.2E-41 T 22-04-2016 SRM_RS15320 b5c99068a1ee2a16352d4ee716fa80ab 200 SUPERFAMILY SSF48498 90 197 1.24E-14 T 22-04-2016 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal SRM_RS15320 b5c99068a1ee2a16352d4ee716fa80ab 200 PANTHER PTHR30055 4 195 1.2E-41 T 22-04-2016 SRM_RS15320 b5c99068a1ee2a16352d4ee716fa80ab 200 SUPERFAMILY SSF46689 13 93 2.36E-14 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 SRM_RS10345 4b4e88f2f914f763ba867a125cc77253 464 Pfam PF00639 PPIC-type PPIASE domain 302 406 7.9E-9 T 22-04-2016 IPR000297 Peptidyl-prolyl cis-trans isomerase, PpiC-type GO:0016853 SRM_RS10345 4b4e88f2f914f763ba867a125cc77253 464 Pfam PF00639 PPIC-type PPIASE domain 196 291 2.2E-18 T 22-04-2016 IPR000297 Peptidyl-prolyl cis-trans isomerase, PpiC-type GO:0016853 SRM_RS10345 4b4e88f2f914f763ba867a125cc77253 464 Gene3D G3DSA:3.10.50.40 295 432 1.9E-16 T 22-04-2016 SRM_RS10345 4b4e88f2f914f763ba867a125cc77253 464 Gene3D G3DSA:3.10.50.40 188 294 2.2E-18 T 22-04-2016 SRM_RS10345 4b4e88f2f914f763ba867a125cc77253 464 PANTHER PTHR10657 18 298 1.6E-31 T 22-04-2016 SRM_RS10345 4b4e88f2f914f763ba867a125cc77253 464 Pfam PF13624 SurA N-terminal domain 41 159 2.9E-7 T 22-04-2016 SRM_RS10345 4b4e88f2f914f763ba867a125cc77253 464 SUPERFAMILY SSF109998 42 208 2.39E-24 T 22-04-2016 IPR027304 Trigger factor/SurA domain SRM_RS10345 4b4e88f2f914f763ba867a125cc77253 464 SUPERFAMILY SSF54534 189 293 1.24E-17 T 22-04-2016 SRM_RS10345 4b4e88f2f914f763ba867a125cc77253 464 SUPERFAMILY SSF54534 298 411 2.42E-8 T 22-04-2016 SRM_RS10345 4b4e88f2f914f763ba867a125cc77253 464 PANTHER PTHR10657:SF11 18 298 1.6E-31 T 22-04-2016 SRM_RS14365 2e02a5325c1ffcb149fc09cf0c1689a3 449 SUPERFAMILY SSF52540 247 447 4.23E-17 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SRM_RS14365 2e02a5325c1ffcb149fc09cf0c1689a3 449 SMART SM00962 252 448 8.7E-4 T 22-04-2016 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: REACT_15380 SRM_RS14365 2e02a5325c1ffcb149fc09cf0c1689a3 449 Gene3D G3DSA:3.40.50.300 248 448 1.2E-19 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SRM_RS14365 2e02a5325c1ffcb149fc09cf0c1689a3 449 Pfam PF00448 SRP54-type protein, GTPase domain 254 447 1.3E-7 T 22-04-2016 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: REACT_15380 SRM_RS11755 9d07cd094c94184e127c24b7548d7283 95 SUPERFAMILY SSF54975 5 94 8.5E-29 T 22-04-2016 IPR001792 Acylphosphatase-like domain KEGG: 00620+3.6.1.7|KEGG: 00627+3.6.1.7 SRM_RS11755 9d07cd094c94184e127c24b7548d7283 95 ProSitePatterns PS00151 Acylphosphatase signature 2. 37 53 - T 22-04-2016 IPR017968 Acylphosphatase, conserved site KEGG: 00620+3.6.1.7|KEGG: 00627+3.6.1.7 SRM_RS11755 9d07cd094c94184e127c24b7548d7283 95 ProSitePatterns PS00150 Acylphosphatase signature 1. 13 23 - T 22-04-2016 IPR017968 Acylphosphatase, conserved site KEGG: 00620+3.6.1.7|KEGG: 00627+3.6.1.7 SRM_RS11755 9d07cd094c94184e127c24b7548d7283 95 Gene3D G3DSA:3.30.70.100 7 94 1.9E-32 T 22-04-2016 SRM_RS11755 9d07cd094c94184e127c24b7548d7283 95 PRINTS PR00112 Acylphosphatase signature 8 23 2.4E-8 T 22-04-2016 IPR020456 Acylphosphatase GO:0003998 KEGG: 00620+3.6.1.7|KEGG: 00627+3.6.1.7 SRM_RS11755 9d07cd094c94184e127c24b7548d7283 95 PRINTS PR00112 Acylphosphatase signature 29 54 2.4E-8 T 22-04-2016 IPR020456 Acylphosphatase GO:0003998 KEGG: 00620+3.6.1.7|KEGG: 00627+3.6.1.7 SRM_RS11755 9d07cd094c94184e127c24b7548d7283 95 Pfam PF00708 Acylphosphatase 6 94 5.4E-29 T 22-04-2016 IPR001792 Acylphosphatase-like domain KEGG: 00620+3.6.1.7|KEGG: 00627+3.6.1.7 SRM_RS11755 9d07cd094c94184e127c24b7548d7283 95 PANTHER PTHR10029 1 95 6.1E-30 T 22-04-2016 SRM_RS07450 55b4d8860f80a6b94a203757771c4ac0 175 SMART SM00450 43 140 1.4E-20 T 22-04-2016 IPR001763 Rhodanese-like domain SRM_RS07450 55b4d8860f80a6b94a203757771c4ac0 175 SUPERFAMILY SSF52821 28 144 1.83E-26 T 22-04-2016 IPR001763 Rhodanese-like domain SRM_RS07450 55b4d8860f80a6b94a203757771c4ac0 175 Gene3D G3DSA:3.40.250.10 34 143 4.6E-27 T 22-04-2016 IPR001763 Rhodanese-like domain SRM_RS07450 55b4d8860f80a6b94a203757771c4ac0 175 Pfam PF00581 Rhodanese-like domain 51 136 1.5E-13 T 22-04-2016 IPR001763 Rhodanese-like domain SRM_RS06265 d2d950c8e318fd6f3b98576d20365c22 305 Gene3D G3DSA:3.40.50.300 14 297 3.3E-55 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SRM_RS06265 d2d950c8e318fd6f3b98576d20365c22 305 SUPERFAMILY SSF52540 7 239 7.97E-50 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SRM_RS06265 d2d950c8e318fd6f3b98576d20365c22 305 SUPERFAMILY SSF52540 267 296 7.97E-50 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SRM_RS06265 d2d950c8e318fd6f3b98576d20365c22 305 Pfam PF00685 Sulfotransferase domain 28 206 1.5E-9 T 22-04-2016 IPR000863 Sulfotransferase domain GO:0008146 SRM_RS06265 d2d950c8e318fd6f3b98576d20365c22 305 PANTHER PTHR10605 31 132 9.1E-14 T 22-04-2016 SRM_RS06440 896dba9cd8a8b9c7c25dfdd46b79cdf9 990 Gene3D G3DSA:1.25.40.10 92 203 9.5E-10 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 SRM_RS06440 896dba9cd8a8b9c7c25dfdd46b79cdf9 990 Gene3D G3DSA:1.25.40.10 204 408 1.4E-11 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 SRM_RS06440 896dba9cd8a8b9c7c25dfdd46b79cdf9 990 Pfam PF13432 Tetratricopeptide repeat 193 250 0.0019 T 22-04-2016 SRM_RS06440 896dba9cd8a8b9c7c25dfdd46b79cdf9 990 Pfam PF13432 Tetratricopeptide repeat 672 723 1.4E-4 T 22-04-2016 SRM_RS06440 896dba9cd8a8b9c7c25dfdd46b79cdf9 990 Pfam PF13432 Tetratricopeptide repeat 119 177 6.3E-5 T 22-04-2016 SRM_RS06440 896dba9cd8a8b9c7c25dfdd46b79cdf9 990 Pfam PF13432 Tetratricopeptide repeat 582 642 2.3E-9 T 22-04-2016 SRM_RS06440 896dba9cd8a8b9c7c25dfdd46b79cdf9 990 PANTHER PTHR23083 668 723 1.5E-18 T 22-04-2016 SRM_RS06440 896dba9cd8a8b9c7c25dfdd46b79cdf9 990 PANTHER PTHR23083 571 642 1.5E-18 T 22-04-2016 SRM_RS06440 896dba9cd8a8b9c7c25dfdd46b79cdf9 990 PANTHER PTHR23083 90 264 1.5E-18 T 22-04-2016 SRM_RS06440 896dba9cd8a8b9c7c25dfdd46b79cdf9 990 PANTHER PTHR23083 305 328 1.5E-18 T 22-04-2016 SRM_RS06440 896dba9cd8a8b9c7c25dfdd46b79cdf9 990 SUPERFAMILY SSF48452 564 718 2.06E-10 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 SRM_RS06440 896dba9cd8a8b9c7c25dfdd46b79cdf9 990 SMART SM00028 114 147 18.0 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 SRM_RS06440 896dba9cd8a8b9c7c25dfdd46b79cdf9 990 SMART SM00028 149 182 27.0 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 SRM_RS06440 896dba9cd8a8b9c7c25dfdd46b79cdf9 990 SMART SM00028 609 642 6.6 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 SRM_RS06440 896dba9cd8a8b9c7c25dfdd46b79cdf9 990 SMART SM00028 224 257 29.0 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 SRM_RS06440 896dba9cd8a8b9c7c25dfdd46b79cdf9 990 SMART SM00028 571 605 62.0 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 SRM_RS06440 896dba9cd8a8b9c7c25dfdd46b79cdf9 990 SMART SM00028 668 701 87.0 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 SRM_RS06440 896dba9cd8a8b9c7c25dfdd46b79cdf9 990 Gene3D G3DSA:1.25.40.10 567 722 1.2E-12 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 SRM_RS06440 896dba9cd8a8b9c7c25dfdd46b79cdf9 990 SUPERFAMILY SSF48452 115 327 1.83E-14 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 SRM_RS14370 42112b2ff47eb7bbddba05772faf27bb 728 PIRSF PIRSF005419 25 713 2.6E-250 T 22-04-2016 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 SRM_RS14370 42112b2ff47eb7bbddba05772faf27bb 728 ProSitePatterns PS00994 Bacterial export FHIPEP family signature. 154 177 - T 22-04-2016 IPR025505 FHIPEP conserved site SRM_RS14370 42112b2ff47eb7bbddba05772faf27bb 728 PANTHER PTHR30161:SF1 32 710 0.0 T 22-04-2016 SRM_RS14370 42112b2ff47eb7bbddba05772faf27bb 728 PANTHER PTHR30161 32 710 0.0 T 22-04-2016 SRM_RS14370 42112b2ff47eb7bbddba05772faf27bb 728 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 50 63 8.3E-52 T 22-04-2016 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 SRM_RS14370 42112b2ff47eb7bbddba05772faf27bb 728 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 87 106 8.3E-52 T 22-04-2016 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 SRM_RS14370 42112b2ff47eb7bbddba05772faf27bb 728 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 249 263 8.3E-52 T 22-04-2016 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 SRM_RS14370 42112b2ff47eb7bbddba05772faf27bb 728 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 198 215 8.3E-52 T 22-04-2016 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 SRM_RS14370 42112b2ff47eb7bbddba05772faf27bb 728 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 149 165 8.3E-52 T 22-04-2016 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 SRM_RS14370 42112b2ff47eb7bbddba05772faf27bb 728 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 168 186 8.3E-52 T 22-04-2016 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 SRM_RS14370 42112b2ff47eb7bbddba05772faf27bb 728 TIGRFAM TIGR01398 FlhA: flagellar biosynthesis protein FlhA 32 706 3.6E-253 T 22-04-2016 IPR006301 Flagellar biosynthesis protein FlhA GO:0016021|GO:0044780 SRM_RS14370 42112b2ff47eb7bbddba05772faf27bb 728 Pfam PF00771 FHIPEP family 43 698 1.1E-259 T 22-04-2016 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 SRM_RS01955 d898a2a7d94baa999022dfacf7297c14 391 Pfam PF14907 Uncharacterised nucleotidyltransferase 64 316 1.6E-54 T 22-04-2016 SRM_RS12145 e346f7d8a91031056451a98aa59bb5f1 144 SUPERFAMILY SSF55961 1 140 5.7E-24 T 22-04-2016 SRM_RS12145 e346f7d8a91031056451a98aa59bb5f1 144 Gene3D G3DSA:3.30.530.20 3 142 1.4E-13 T 22-04-2016 IPR023393 START-like domain SRM_RS12145 e346f7d8a91031056451a98aa59bb5f1 144 Pfam PF10604 Polyketide cyclase / dehydrase and lipid transport 1 142 1.6E-12 T 22-04-2016 IPR019587 Polyketide cyclase/dehydrase SRM_RS06750 3c53990ee58d968d93ae388d82b690cb 281 SUPERFAMILY SSF101386 28 124 2.45E-23 T 22-04-2016 SRM_RS06750 3c53990ee58d968d93ae388d82b690cb 281 PANTHER PTHR30522:SF0 18 281 1.4E-101 T 22-04-2016 IPR011551 NTP pyrophosphohydrolase MazG SRM_RS06750 3c53990ee58d968d93ae388d82b690cb 281 Gene3D G3DSA:1.10.287.1080 23 91 1.2E-10 T 22-04-2016 SRM_RS06750 3c53990ee58d968d93ae388d82b690cb 281 Gene3D G3DSA:1.10.287.1080 152 239 7.0E-10 T 22-04-2016 SRM_RS06750 3c53990ee58d968d93ae388d82b690cb 281 PANTHER PTHR30522 18 281 1.4E-101 T 22-04-2016 SRM_RS06750 3c53990ee58d968d93ae388d82b690cb 281 TIGRFAM TIGR00444 mazG: MazG family protein 33 277 2.7E-89 T 22-04-2016 IPR011551 NTP pyrophosphohydrolase MazG SRM_RS06750 3c53990ee58d968d93ae388d82b690cb 281 Pfam PF03819 MazG nucleotide pyrophosphohydrolase domain 190 249 3.5E-5 T 22-04-2016 IPR004518 NTP pyrophosphohydrolase MazG, putative catalytic core SRM_RS06750 3c53990ee58d968d93ae388d82b690cb 281 Pfam PF03819 MazG nucleotide pyrophosphohydrolase domain 47 120 2.8E-26 T 22-04-2016 IPR004518 NTP pyrophosphohydrolase MazG, putative catalytic core SRM_RS06750 3c53990ee58d968d93ae388d82b690cb 281 SUPERFAMILY SSF101386 157 257 8.41E-22 T 22-04-2016 SRM_RS04810 f788f63190a5ea8992aae65ec830d79f 517 Gene3D G3DSA:1.20.200.10 219 509 2.7E-82 T 22-04-2016 SRM_RS04810 f788f63190a5ea8992aae65ec830d79f 517 ProSitePatterns PS00488 Phenylalanine and histidine ammonia-lyases signature. 159 174 - T 22-04-2016 IPR022313 Phenylalanine/histidine ammonia-lyases, active site GO:0016841 SRM_RS04810 f788f63190a5ea8992aae65ec830d79f 517 PANTHER PTHR10362:SF7 20 509 7.8E-107 T 22-04-2016 SRM_RS04810 f788f63190a5ea8992aae65ec830d79f 517 PANTHER PTHR10362 20 509 7.8E-107 T 22-04-2016 SRM_RS04810 f788f63190a5ea8992aae65ec830d79f 517 SUPERFAMILY SSF48557 19 511 4.47E-138 T 22-04-2016 IPR008948 L-Aspartase-like GO:0003824 SRM_RS04810 f788f63190a5ea8992aae65ec830d79f 517 Pfam PF00221 Aromatic amino acid lyase 20 474 3.5E-133 T 22-04-2016 IPR001106 Aromatic amino acid lyase SRM_RS04810 f788f63190a5ea8992aae65ec830d79f 517 Gene3D G3DSA:1.10.275.10 19 218 3.5E-51 T 22-04-2016 IPR024083 Fumarase/histidase, N-terminal SRM_RS13890 1b2121a45f330986fab67e61d96de57b 246 Gene3D G3DSA:3.40.50.2300 7 132 5.8E-36 T 22-04-2016 SRM_RS13890 1b2121a45f330986fab67e61d96de57b 246 Pfam PF00486 Transcriptional regulatory protein, C terminal 156 232 4.1E-20 T 22-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 SRM_RS13890 1b2121a45f330986fab67e61d96de57b 246 SMART SM00448 9 121 1.2E-36 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SRM_RS13890 1b2121a45f330986fab67e61d96de57b 246 SUPERFAMILY SSF52172 6 131 5.55E-37 T 22-04-2016 IPR011006 CheY-like superfamily SRM_RS13890 1b2121a45f330986fab67e61d96de57b 246 Pfam PF00072 Response regulator receiver domain 12 121 1.1E-24 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SRM_RS13890 1b2121a45f330986fab67e61d96de57b 246 SMART SM00862 156 232 9.8E-19 T 22-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 SRM_RS13890 1b2121a45f330986fab67e61d96de57b 246 PANTHER PTHR26402 9 237 6.7E-75 T 22-04-2016 SRM_RS13890 1b2121a45f330986fab67e61d96de57b 246 SUPERFAMILY SSF46894 134 233 3.68E-25 T 22-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 SRM_RS13890 1b2121a45f330986fab67e61d96de57b 246 PANTHER PTHR26402:SF553 9 237 6.7E-75 T 22-04-2016 SRM_RS13890 1b2121a45f330986fab67e61d96de57b 246 Gene3D G3DSA:1.10.10.10 133 234 2.2E-28 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SRM_RS02735 fefdf0b2a7e8a80faffe316c71edfa9d 236 PANTHER PTHR13017 7 236 2.9E-81 T 22-04-2016 SRM_RS02735 fefdf0b2a7e8a80faffe316c71edfa9d 236 SUPERFAMILY SSF100950 7 217 7.39E-29 T 22-04-2016 SRM_RS02735 fefdf0b2a7e8a80faffe316c71edfa9d 236 PANTHER PTHR13017:SF0 7 236 2.9E-81 T 22-04-2016 SRM_RS02735 fefdf0b2a7e8a80faffe316c71edfa9d 236 Pfam PF01812 5-formyltetrahydrofolate cyclo-ligase family 9 199 4.5E-28 T 22-04-2016 IPR002698 5-formyltetrahydrofolate cyclo-ligase SRM_RS02735 fefdf0b2a7e8a80faffe316c71edfa9d 236 Gene3D G3DSA:3.40.50.10420 7 214 2.2E-27 T 22-04-2016 IPR024185 5-formyltetrahydrofolate cyclo-ligase-like domain SRM_RS12580 383f6b35d99cbbe84511452a61d0e841 304 SUPERFAMILY SSF117892 49 183 3.66E-41 T 22-04-2016 IPR001107 Band 7 domain SRM_RS12580 383f6b35d99cbbe84511452a61d0e841 304 PANTHER PTHR10264:SF27 1 303 1.6E-124 T 22-04-2016 SRM_RS12580 383f6b35d99cbbe84511452a61d0e841 304 PRINTS PR00721 Stomatin signature 152 170 2.4E-26 T 22-04-2016 IPR001972 Stomatin family GO:0016020 SRM_RS12580 383f6b35d99cbbe84511452a61d0e841 304 PRINTS PR00721 Stomatin signature 108 125 2.4E-26 T 22-04-2016 IPR001972 Stomatin family GO:0016020 SRM_RS12580 383f6b35d99cbbe84511452a61d0e841 304 PRINTS PR00721 Stomatin signature 128 151 2.4E-26 T 22-04-2016 IPR001972 Stomatin family GO:0016020 SRM_RS12580 383f6b35d99cbbe84511452a61d0e841 304 PRINTS PR00721 Stomatin signature 171 192 2.4E-26 T 22-04-2016 IPR001972 Stomatin family GO:0016020 SRM_RS12580 383f6b35d99cbbe84511452a61d0e841 304 PRINTS PR00721 Stomatin signature 73 94 2.4E-26 T 22-04-2016 IPR001972 Stomatin family GO:0016020 SRM_RS12580 383f6b35d99cbbe84511452a61d0e841 304 Pfam PF16200 C-terminal region of band_7 241 302 2.0E-14 T 22-04-2016 IPR032435 Band 7, C-terminal extension SRM_RS12580 383f6b35d99cbbe84511452a61d0e841 304 Pfam PF01145 SPFH domain / Band 7 family 22 192 2.8E-30 T 22-04-2016 IPR001107 Band 7 domain SRM_RS12580 383f6b35d99cbbe84511452a61d0e841 304 PANTHER PTHR10264 1 303 1.6E-124 T 22-04-2016 IPR001972 Stomatin family GO:0016020 SRM_RS12580 383f6b35d99cbbe84511452a61d0e841 304 SMART SM00244 18 176 2.5E-57 T 22-04-2016 IPR001107 Band 7 domain SRM_RS02630 95045719098759ccadc8529b7887972b 275 PANTHER PTHR41260 7 274 8.8E-27 T 22-04-2016 SRM_RS02630 95045719098759ccadc8529b7887972b 275 Pfam PF12787 EcsC protein family 14 267 1.3E-53 T 22-04-2016 IPR024787 EcsC protein SRM_RS15425 a62570baec67d01c9c31e8f95906dfcf 137 SUPERFAMILY SSF55620 3 137 3.0E-47 T 22-04-2016 SRM_RS15425 a62570baec67d01c9c31e8f95906dfcf 137 PANTHER PTHR12589 4 137 4.6E-51 T 22-04-2016 IPR007115 6-pyruvoyl tetrahydropterin synthase/QueD family protein SRM_RS15425 a62570baec67d01c9c31e8f95906dfcf 137 Pfam PF01242 6-pyruvoyl tetrahydropterin synthase 5 137 9.9E-36 T 22-04-2016 IPR007115 6-pyruvoyl tetrahydropterin synthase/QueD family protein SRM_RS15425 a62570baec67d01c9c31e8f95906dfcf 137 Gene3D G3DSA:3.30.479.10 2 137 4.6E-45 T 22-04-2016 SRM_RS15425 a62570baec67d01c9c31e8f95906dfcf 137 PIRSF PIRSF006113 1 137 2.7E-20 T 22-04-2016 IPR007115 6-pyruvoyl tetrahydropterin synthase/QueD family protein SRM_RS08300 ebcef272b4277220ee63723b6bd382b9 295 PANTHER PTHR21299 1 290 6.2E-125 T 22-04-2016 SRM_RS08300 ebcef272b4277220ee63723b6bd382b9 295 Gene3D G3DSA:3.30.1300.10 182 291 3.7E-32 T 22-04-2016 SRM_RS08300 ebcef272b4277220ee63723b6bd382b9 295 Hamap MF_00158 Pantothenate synthetase [panC]. 2 288 38.718 T 22-04-2016 IPR003721 Pantoate-beta-alanine ligase GO:0004592|GO:0015940 KEGG: 00410+6.3.2.1|KEGG: 00770+6.3.2.1|UniPathway: UPA00028 SRM_RS08300 ebcef272b4277220ee63723b6bd382b9 295 TIGRFAM TIGR00125 cyt_tran_rel: cytidyltransferase-like domain 28 82 4.8E-7 T 22-04-2016 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 SRM_RS08300 ebcef272b4277220ee63723b6bd382b9 295 Pfam PF02569 Pantoate-beta-alanine ligase 3 286 9.1E-99 T 22-04-2016 IPR003721 Pantoate-beta-alanine ligase GO:0004592|GO:0015940 KEGG: 00410+6.3.2.1|KEGG: 00770+6.3.2.1|UniPathway: UPA00028 SRM_RS08300 ebcef272b4277220ee63723b6bd382b9 295 PANTHER PTHR21299:SF1 1 290 6.2E-125 T 22-04-2016 IPR003721 Pantoate-beta-alanine ligase GO:0004592|GO:0015940 KEGG: 00410+6.3.2.1|KEGG: 00770+6.3.2.1|UniPathway: UPA00028 SRM_RS08300 ebcef272b4277220ee63723b6bd382b9 295 SUPERFAMILY SSF52374 1 289 4.02E-100 T 22-04-2016 SRM_RS08300 ebcef272b4277220ee63723b6bd382b9 295 TIGRFAM TIGR00018 panC: pantoate--beta-alanine ligase 1 288 2.0E-101 T 22-04-2016 IPR003721 Pantoate-beta-alanine ligase GO:0004592|GO:0015940 KEGG: 00410+6.3.2.1|KEGG: 00770+6.3.2.1|UniPathway: UPA00028 SRM_RS08300 ebcef272b4277220ee63723b6bd382b9 295 Gene3D G3DSA:3.40.50.620 1 181 3.6E-71 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold SRM_RS06885 94c8a71823c971ba8a4dfc2e7da08e98 408 Pfam PF12323 Helix-turn-helix domain 4 48 1.2E-19 T 22-04-2016 IPR021027 Transposase, putative, helix-turn-helix domain SRM_RS06885 94c8a71823c971ba8a4dfc2e7da08e98 408 PANTHER PTHR30405 7 373 3.0E-107 T 22-04-2016 SRM_RS06885 94c8a71823c971ba8a4dfc2e7da08e98 408 Pfam PF01385 Probable transposase 181 287 3.2E-21 T 22-04-2016 IPR001959 Probable transposase, IS891/IS1136/IS1341 SRM_RS06885 94c8a71823c971ba8a4dfc2e7da08e98 408 Pfam PF07282 Putative transposase DNA-binding domain 301 369 1.3E-22 T 22-04-2016 IPR010095 Transposase IS605, OrfB, C-terminal SRM_RS06885 94c8a71823c971ba8a4dfc2e7da08e98 408 TIGRFAM TIGR01766 tspaseT_teng_C: transposase, IS605 OrfB family 255 328 1.2E-14 T 22-04-2016 IPR010095 Transposase IS605, OrfB, C-terminal SRM_RS06885 94c8a71823c971ba8a4dfc2e7da08e98 408 PANTHER PTHR30405:SF5 7 373 3.0E-107 T 22-04-2016 SRM_RS10390 541699798a21e3059b4e64eb80018ec5 181 SUPERFAMILY SSF50199 40 173 3.01E-30 T 22-04-2016 IPR016071 Staphylococcal nuclease (SNase-like), OB-fold SRM_RS10390 541699798a21e3059b4e64eb80018ec5 181 PANTHER PTHR12302 52 181 2.0E-22 T 22-04-2016 SRM_RS10390 541699798a21e3059b4e64eb80018ec5 181 PANTHER PTHR12302:SF0 52 181 2.0E-22 T 22-04-2016 SRM_RS10390 541699798a21e3059b4e64eb80018ec5 181 Gene3D G3DSA:2.40.50.90 40 172 2.0E-25 T 22-04-2016 IPR016071 Staphylococcal nuclease (SNase-like), OB-fold SRM_RS10390 541699798a21e3059b4e64eb80018ec5 181 SMART SM00318 44 166 1.1E-14 T 22-04-2016 IPR016071 Staphylococcal nuclease (SNase-like), OB-fold SRM_RS10390 541699798a21e3059b4e64eb80018ec5 181 Pfam PF00565 Staphylococcal nuclease homologue 70 166 1.3E-15 T 22-04-2016 IPR016071 Staphylococcal nuclease (SNase-like), OB-fold SRM_RS09875 52bdbd9cff975b3c8d7292ce33134141 272 Pfam PF01148 Cytidylyltransferase family 6 267 2.2E-53 T 22-04-2016 SRM_RS09875 52bdbd9cff975b3c8d7292ce33134141 272 PANTHER PTHR13773 7 266 4.7E-50 T 22-04-2016 SRM_RS14640 c67f9836099f2ff4493b7d9fb3645435 178 Pfam PF05130 FlgN protein 8 164 9.0E-24 T 22-04-2016 IPR007809 FlgN-like protein GO:0005515|GO:0044780 SRM_RS14640 c67f9836099f2ff4493b7d9fb3645435 178 Gene3D G3DSA:1.20.58.300 11 126 1.0E-4 T 22-04-2016 IPR007809 FlgN-like protein GO:0005515|GO:0044780 SRM_RS14640 c67f9836099f2ff4493b7d9fb3645435 178 SUPERFAMILY SSF140566 10 144 1.57E-9 T 22-04-2016 IPR007809 FlgN-like protein GO:0005515|GO:0044780 SRM_RS06800 b7018087b4bf8135f4463af3ff914d0c 659 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 415 519 6.8E-19 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SRM_RS06800 b7018087b4bf8135f4463af3ff914d0c 659 Pfam PF00512 His Kinase A (phospho-acceptor) domain 296 362 9.1E-9 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SRM_RS06800 b7018087b4bf8135f4463af3ff914d0c 659 Pfam PF00072 Response regulator receiver domain 546 652 4.9E-22 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SRM_RS06800 b7018087b4bf8135f4463af3ff914d0c 659 SUPERFAMILY SSF52172 542 655 1.28E-30 T 22-04-2016 IPR011006 CheY-like superfamily SRM_RS06800 b7018087b4bf8135f4463af3ff914d0c 659 PRINTS PR00344 Bacterial sensor protein C-terminal signature 480 498 8.4E-16 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SRM_RS06800 b7018087b4bf8135f4463af3ff914d0c 659 PRINTS PR00344 Bacterial sensor protein C-terminal signature 468 478 8.4E-16 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SRM_RS06800 b7018087b4bf8135f4463af3ff914d0c 659 PRINTS PR00344 Bacterial sensor protein C-terminal signature 504 517 8.4E-16 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SRM_RS06800 b7018087b4bf8135f4463af3ff914d0c 659 PRINTS PR00344 Bacterial sensor protein C-terminal signature 450 464 8.4E-16 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SRM_RS06800 b7018087b4bf8135f4463af3ff914d0c 659 SMART SM00448 544 651 2.2E-25 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SRM_RS06800 b7018087b4bf8135f4463af3ff914d0c 659 PANTHER PTHR24423 292 653 4.6E-90 T 22-04-2016 SRM_RS06800 b7018087b4bf8135f4463af3ff914d0c 659 PANTHER PTHR24423:SF544 292 653 4.6E-90 T 22-04-2016 SRM_RS06800 b7018087b4bf8135f4463af3ff914d0c 659 SUPERFAMILY SSF47384 287 364 4.71E-8 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SRM_RS06800 b7018087b4bf8135f4463af3ff914d0c 659 Gene3D G3DSA:1.10.287.130 289 356 1.7E-4 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SRM_RS06800 b7018087b4bf8135f4463af3ff914d0c 659 SMART SM00388 295 364 5.9E-8 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SRM_RS06800 b7018087b4bf8135f4463af3ff914d0c 659 Gene3D G3DSA:3.30.565.10 367 517 1.1E-37 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SRM_RS06800 b7018087b4bf8135f4463af3ff914d0c 659 Gene3D G3DSA:3.40.50.2300 543 654 2.8E-32 T 22-04-2016 SRM_RS06800 b7018087b4bf8135f4463af3ff914d0c 659 SMART SM00387 412 520 3.1E-29 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SRM_RS06800 b7018087b4bf8135f4463af3ff914d0c 659 SUPERFAMILY SSF55874 359 518 3.67E-36 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SRM_RS06800 b7018087b4bf8135f4463af3ff914d0c 659 Pfam PF11950 Protein of unknown function (DUF3467) 49 116 3.1E-17 T 22-04-2016 IPR021857 Protein of unknown function DUF3467 SRM_RS11165 1cddaf4ca62e33ad60ee7014f069a06a 291 PANTHER PTHR30489 4 289 3.9E-19 T 22-04-2016 SRM_RS11165 1cddaf4ca62e33ad60ee7014f069a06a 291 PIRSF PIRSF003097 1 287 2.6E-97 T 22-04-2016 IPR004513 Cell division protein FtsX GO:0007049|GO:0016021 SRM_RS11165 1cddaf4ca62e33ad60ee7014f069a06a 291 Pfam PF02687 FtsX-like permease family 174 280 3.3E-11 T 22-04-2016 IPR003838 ABC transporter permease protein domain GO:0016020 SRM_RS09355 7bac18591118469f89fdcf1b4e696f58 364 Pfam PF00465 Iron-containing alcohol dehydrogenase 8 346 7.8E-60 T 22-04-2016 IPR001670 Alcohol dehydrogenase, iron-type GO:0016491|GO:0046872|GO:0055114 SRM_RS09355 7bac18591118469f89fdcf1b4e696f58 364 SUPERFAMILY SSF56796 4 356 8.77E-78 T 22-04-2016 SRM_RS09355 7bac18591118469f89fdcf1b4e696f58 364 PANTHER PTHR11496:SF73 1 362 1.9E-158 T 22-04-2016 SRM_RS09355 7bac18591118469f89fdcf1b4e696f58 364 Gene3D G3DSA:1.20.1090.10 161 359 2.1E-56 T 22-04-2016 SRM_RS09355 7bac18591118469f89fdcf1b4e696f58 364 PIRSF PIRSF000112 1 360 6.8E-88 T 22-04-2016 SRM_RS09355 7bac18591118469f89fdcf1b4e696f58 364 ProSitePatterns PS00060 Iron-containing alcohol dehydrogenases signature 2. 242 262 - T 22-04-2016 IPR018211 Alcohol dehydrogenase, iron-type, conserved site GO:0016491|GO:0046872|GO:0055114 SRM_RS09355 7bac18591118469f89fdcf1b4e696f58 364 Gene3D G3DSA:3.40.50.1970 2 159 9.6E-39 T 22-04-2016 SRM_RS09355 7bac18591118469f89fdcf1b4e696f58 364 PANTHER PTHR11496 1 362 1.9E-158 T 22-04-2016 SRM_RS12435 df09b884b3a13e3b0351a80fadc3bd95 221 Gene3D G3DSA:2.40.160.20 58 218 6.7E-7 T 22-04-2016 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 SRM_RS12435 df09b884b3a13e3b0351a80fadc3bd95 221 Pfam PF13505 Outer membrane protein beta-barrel domain 12 218 2.3E-10 T 22-04-2016 IPR027385 Outer membrane protein beta-barrel SRM_RS12435 df09b884b3a13e3b0351a80fadc3bd95 221 SUPERFAMILY SSF56925 117 220 2.75E-9 T 22-04-2016 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 SRM_RS04735 7428e8dd5f4c821036530ed46d173969 434 Pfam PF13715 CarboxypepD_reg-like domain 80 165 4.9E-19 T 22-04-2016 SRM_RS04735 7428e8dd5f4c821036530ed46d173969 434 SUPERFAMILY SSF49464 76 148 7.06E-16 T 22-04-2016 IPR008969 Carboxypeptidase-like, regulatory domain SRM_RS04735 7428e8dd5f4c821036530ed46d173969 434 PANTHER PTHR30069 75 176 1.6E-12 T 22-04-2016 SRM_RS04735 7428e8dd5f4c821036530ed46d173969 434 Gene3D G3DSA:2.60.40.1120 77 153 5.2E-14 T 22-04-2016 IPR014766 Carboxypeptidase, regulatory domain SRM_RS05870 fc800e734b918ce31d91df96342e6c78 421 SUPERFAMILY SSF52540 8 420 3.81E-41 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SRM_RS05870 fc800e734b918ce31d91df96342e6c78 421 Gene3D G3DSA:3.40.50.300 8 150 7.9E-13 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SRM_RS05870 fc800e734b918ce31d91df96342e6c78 421 Pfam PF13538 UvrD-like helicase C-terminal domain 370 419 2.2E-12 T 22-04-2016 IPR027785 UvrD-like helicase C-terminal domain SRM_RS05870 fc800e734b918ce31d91df96342e6c78 421 Gene3D G3DSA:3.40.50.300 359 420 2.8E-25 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SRM_RS05870 fc800e734b918ce31d91df96342e6c78 421 Gene3D G3DSA:3.40.50.300 151 258 2.8E-25 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SRM_RS05870 fc800e734b918ce31d91df96342e6c78 421 Pfam PF13604 AAA domain 10 196 4.6E-25 T 22-04-2016 SRM_RS01700 b201a4d1a763a2879a7b4f5454ce0502 281 Pfam PF13276 HTH-like domain 24 81 2.3E-21 T 22-04-2016 IPR025948 HTH-like domain SRM_RS01700 b201a4d1a763a2879a7b4f5454ce0502 281 PANTHER PTHR32552 1 267 1.6E-68 T 22-04-2016 SRM_RS01700 b201a4d1a763a2879a7b4f5454ce0502 281 SUPERFAMILY SSF53098 99 261 8.35E-36 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 SRM_RS01700 b201a4d1a763a2879a7b4f5454ce0502 281 Gene3D G3DSA:3.30.420.10 99 257 1.2E-32 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 SRM_RS01700 b201a4d1a763a2879a7b4f5454ce0502 281 Pfam PF00665 Integrase core domain 105 216 7.6E-27 T 22-04-2016 IPR001584 Integrase, catalytic core GO:0015074 SRM_RS04960 e84b390c7d065d552f7fc2f58e415a08 248 Gene3D G3DSA:2.20.25.10 223 247 1.4E-5 T 22-04-2016 SRM_RS04960 e84b390c7d065d552f7fc2f58e415a08 248 SUPERFAMILY SSF52172 2 177 4.13E-35 T 22-04-2016 IPR011006 CheY-like superfamily SRM_RS04960 e84b390c7d065d552f7fc2f58e415a08 248 Pfam PF00072 Response regulator receiver domain 4 109 7.5E-25 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SRM_RS04960 e84b390c7d065d552f7fc2f58e415a08 248 SMART SM00448 1 109 4.4E-33 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SRM_RS04960 e84b390c7d065d552f7fc2f58e415a08 248 PANTHER PTHR26402 1 155 2.0E-35 T 22-04-2016 SRM_RS04960 e84b390c7d065d552f7fc2f58e415a08 248 Pfam PF04397 LytTr DNA-binding domain 151 247 1.1E-22 T 22-04-2016 IPR007492 LytTR DNA-binding domain GO:0003677 SRM_RS04960 e84b390c7d065d552f7fc2f58e415a08 248 Gene3D G3DSA:2.40.50.40 143 206 2.9E-18 T 22-04-2016 SRM_RS04960 e84b390c7d065d552f7fc2f58e415a08 248 Gene3D G3DSA:3.40.50.2300 2 120 2.3E-34 T 22-04-2016 SRM_RS04960 e84b390c7d065d552f7fc2f58e415a08 248 SMART SM00850 151 248 2.4E-32 T 22-04-2016 IPR007492 LytTR DNA-binding domain GO:0003677 SRM_RS05170 0d54249ccd0b62a445513de6f4941829 451 Gene3D G3DSA:1.25.40.10 227 292 1.2E-9 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 SRM_RS05170 0d54249ccd0b62a445513de6f4941829 451 Gene3D G3DSA:1.25.40.10 293 405 8.1E-12 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 SRM_RS05170 0d54249ccd0b62a445513de6f4941829 451 PANTHER PTHR23083 242 360 1.7E-13 T 22-04-2016 SRM_RS05170 0d54249ccd0b62a445513de6f4941829 451 PANTHER PTHR23083 161 209 1.7E-13 T 22-04-2016 SRM_RS05170 0d54249ccd0b62a445513de6f4941829 451 SMART SM00028 314 347 1.8E-5 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 SRM_RS05170 0d54249ccd0b62a445513de6f4941829 451 SMART SM00028 279 312 110.0 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 SRM_RS05170 0d54249ccd0b62a445513de6f4941829 451 SUPERFAMILY SSF48452 234 360 3.75E-16 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 SRM_RS05170 0d54249ccd0b62a445513de6f4941829 451 Pfam PF13181 Tetratricopeptide repeat 318 344 0.0014 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 SRM_RS02895 8d2c87738ceb73842fc8631377d367e0 451 Hamap MF_01358 NAD(P)H-quinone oxidoreductase subunit H, chloroplastic [ndhH]. 57 451 45.687 T 22-04-2016 IPR022885 NAD(P)H-quinone oxidoreductase subunit D/H GO:0016651|GO:0055114 SRM_RS02895 8d2c87738ceb73842fc8631377d367e0 451 TIGRFAM TIGR01962 NuoD: NADH dehydrogenase (quinone), D subunit 66 451 1.9E-160 T 22-04-2016 IPR022885 NAD(P)H-quinone oxidoreductase subunit D/H GO:0016651|GO:0055114 SRM_RS02895 8d2c87738ceb73842fc8631377d367e0 451 SUPERFAMILY SSF56762 76 450 1.57E-131 T 22-04-2016 IPR029014 NiFe hydrogenase-like SRM_RS02895 8d2c87738ceb73842fc8631377d367e0 451 Gene3D G3DSA:1.10.645.10 64 291 1.3E-45 T 22-04-2016 IPR029014 NiFe hydrogenase-like SRM_RS02895 8d2c87738ceb73842fc8631377d367e0 451 Gene3D G3DSA:1.10.645.10 293 444 4.1E-24 T 22-04-2016 IPR029014 NiFe hydrogenase-like SRM_RS02895 8d2c87738ceb73842fc8631377d367e0 451 Pfam PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit 180 451 1.1E-108 T 22-04-2016 IPR001135 NADH-quinone oxidoreductase, subunit D GO:0016651|GO:0048038|GO:0051287|GO:0055114 SRM_RS02895 8d2c87738ceb73842fc8631377d367e0 451 ProSitePatterns PS00535 Respiratory chain NADH dehydrogenase 49 Kd subunit signature. 103 114 - T 22-04-2016 IPR014029 NADH:ubiquinone oxidoreductase, 49kDa subunit, conserved site GO:0016651|GO:0055114 SRM_RS03870 d47679e78cd6aa7b5c9aad7ab741787a 162 SUPERFAMILY SSF81301 32 125 8.18E-13 T 22-04-2016 SRM_RS03870 d47679e78cd6aa7b5c9aad7ab741787a 162 PANTHER PTHR33397 37 158 9.5E-17 T 22-04-2016 SRM_RS03870 d47679e78cd6aa7b5c9aad7ab741787a 162 Pfam PF01909 Nucleotidyltransferase domain 34 73 8.6E-5 T 22-04-2016 IPR002934 Polymerase, nucleotidyl transferase domain GO:0016779 SRM_RS03870 d47679e78cd6aa7b5c9aad7ab741787a 162 Gene3D G3DSA:3.30.460.10 24 125 2.0E-15 T 22-04-2016 SRM_RS03870 d47679e78cd6aa7b5c9aad7ab741787a 162 PANTHER PTHR33397:SF2 37 158 9.5E-17 T 22-04-2016 SRM_RS08225 51adf20070f57fbbd4a62fed752be860 360 SUPERFAMILY SSF81324 37 155 2.28E-5 T 22-04-2016 SRM_RS08225 51adf20070f57fbbd4a62fed752be860 360 Gene3D G3DSA:1.20.120.350 24 117 5.0E-5 T 22-04-2016 IPR027359 Voltage-dependent channel, four helix bundle domain SRM_RS00920 494ed41edf7c06328b46851af5289bb0 148 PANTHER PTHR11545 5 146 1.4E-71 T 22-04-2016 IPR005822 Ribosomal protein L13 GO:0003735|GO:0005840|GO:0006412 SRM_RS00920 494ed41edf7c06328b46851af5289bb0 148 Hamap MF_01366 50S ribosomal protein L13 [rplM]. 20 146 28.367 T 22-04-2016 IPR005822 Ribosomal protein L13 GO:0003735|GO:0005840|GO:0006412 SRM_RS00920 494ed41edf7c06328b46851af5289bb0 148 PIRSF PIRSF002181 3 147 3.8E-50 T 22-04-2016 IPR005822 Ribosomal protein L13 GO:0003735|GO:0005840|GO:0006412 SRM_RS00920 494ed41edf7c06328b46851af5289bb0 148 Gene3D G3DSA:3.90.1180.10 9 146 1.1E-61 T 22-04-2016 IPR023564 Ribosomal protein L13 domain GO:0003735|GO:0005840|GO:0006412 SRM_RS00920 494ed41edf7c06328b46851af5289bb0 148 Pfam PF00572 Ribosomal protein L13 20 143 5.5E-55 T 22-04-2016 IPR005822 Ribosomal protein L13 GO:0003735|GO:0005840|GO:0006412 SRM_RS00920 494ed41edf7c06328b46851af5289bb0 148 TIGRFAM TIGR01066 rplM_bact: ribosomal protein uL13 10 146 6.5E-60 T 22-04-2016 IPR005823 Ribosomal protein L13, bacterial-type GO:0003735|GO:0005840|GO:0006412 SRM_RS00920 494ed41edf7c06328b46851af5289bb0 148 SUPERFAMILY SSF52161 7 144 1.96E-56 T 22-04-2016 IPR023564 Ribosomal protein L13 domain GO:0003735|GO:0005840|GO:0006412 SRM_RS12075 ec2a75e35d80f9be43ddd12603cbda5a 374 PANTHER PTHR11751 15 369 1.2E-76 T 22-04-2016 SRM_RS12075 ec2a75e35d80f9be43ddd12603cbda5a 374 SUPERFAMILY SSF53383 16 361 2.89E-76 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase SRM_RS12075 ec2a75e35d80f9be43ddd12603cbda5a 374 Pfam PF00155 Aminotransferase class I and II 37 361 3.4E-59 T 22-04-2016 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 SRM_RS12075 ec2a75e35d80f9be43ddd12603cbda5a 374 ProSitePatterns PS00599 Aminotransferases class-II pyridoxal-phosphate attachment site. 223 232 - T 22-04-2016 IPR001917 Aminotransferase, class-II, pyridoxal-phosphate binding site GO:0008152|GO:0016740 SRM_RS12075 ec2a75e35d80f9be43ddd12603cbda5a 374 Gene3D G3DSA:3.90.1150.10 266 366 3.0E-23 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 SRM_RS12075 ec2a75e35d80f9be43ddd12603cbda5a 374 Hamap MF_01023 Histidinol-phosphate aminotransferase [hisC]. 16 365 49.495 T 22-04-2016 IPR005861 Histidinol-phosphate aminotransferase family GO:0000105|GO:0004400 KEGG: 00340+2.6.1.9|KEGG: 00350+2.6.1.9|KEGG: 00360+2.6.1.9|KEGG: 00400+2.6.1.9|KEGG: 00401+2.6.1.9|KEGG: 00960+2.6.1.9|UniPathway: UPA00031 SRM_RS12075 ec2a75e35d80f9be43ddd12603cbda5a 374 TIGRFAM TIGR01141 hisC: histidinol-phosphate transaminase 20 362 4.6E-96 T 22-04-2016 IPR005861 Histidinol-phosphate aminotransferase family GO:0000105|GO:0004400 KEGG: 00340+2.6.1.9|KEGG: 00350+2.6.1.9|KEGG: 00360+2.6.1.9|KEGG: 00400+2.6.1.9|KEGG: 00401+2.6.1.9|KEGG: 00960+2.6.1.9|UniPathway: UPA00031 SRM_RS12075 ec2a75e35d80f9be43ddd12603cbda5a 374 PANTHER PTHR11751:SF398 15 369 1.2E-76 T 22-04-2016 SRM_RS12075 ec2a75e35d80f9be43ddd12603cbda5a 374 Gene3D G3DSA:3.40.640.10 56 265 7.8E-62 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 SRM_RS01275 5c39d24d2a35a36c6aa2a24e1a778c7a 273 Pfam PF02517 CAAX protease self-immunity 164 266 1.3E-10 T 22-04-2016 IPR003675 CAAX amino terminal protease GO:0016020 SRM_RS11690 0b049646ac83734e006112d724552c17 118 Pfam PF00543 Nitrogen regulatory protein P-II 20 107 4.0E-5 T 22-04-2016 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 SRM_RS11690 0b049646ac83734e006112d724552c17 118 Gene3D G3DSA:3.30.70.120 34 113 3.9E-5 T 22-04-2016 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal SRM_RS11690 0b049646ac83734e006112d724552c17 118 SUPERFAMILY SSF54913 14 113 5.0E-17 T 22-04-2016 IPR011322 Nitrogen regulatory PII-like, alpha/beta SRM_RS06845 0a1cf0e52d7c129bd87f4bcf25a10de2 497 Gene3D G3DSA:3.30.70.270 363 494 8.3E-5 T 22-04-2016 SRM_RS10275 e5f4ddc23e4e28403a2adcee3b016846 245 ProDom PD019177 PF1672 MJ0935 ST1363 PH1730 UNCHARACTERIZED ARCHAEAL 23 67 1.0E-4 T 22-04-2016 IPR007368 Protein of unknown function DUF434 SRM_RS10275 e5f4ddc23e4e28403a2adcee3b016846 245 PANTHER PTHR42252 18 244 1.6E-29 T 22-04-2016 SRM_RS10275 e5f4ddc23e4e28403a2adcee3b016846 245 PANTHER PTHR42252:SF1 18 244 1.6E-29 T 22-04-2016 SRM_RS10275 e5f4ddc23e4e28403a2adcee3b016846 245 Pfam PF04256 Protein of unknown function (DUF434) 22 75 5.1E-19 T 22-04-2016 IPR007368 Protein of unknown function DUF434 SRM_RS11990 21e4bc01c175f5242e00e335ef175418 127 PRINTS PR01651 Protein-export SecG membrane protein signature 54 76 2.4E-7 T 22-04-2016 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 SRM_RS11990 21e4bc01c175f5242e00e335ef175418 127 PRINTS PR01651 Protein-export SecG membrane protein signature 23 37 2.4E-7 T 22-04-2016 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 SRM_RS11990 21e4bc01c175f5242e00e335ef175418 127 PRINTS PR01651 Protein-export SecG membrane protein signature 38 54 2.4E-7 T 22-04-2016 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 SRM_RS11990 21e4bc01c175f5242e00e335ef175418 127 PRINTS PR01651 Protein-export SecG membrane protein signature 3 23 2.4E-7 T 22-04-2016 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 SRM_RS11990 21e4bc01c175f5242e00e335ef175418 127 TIGRFAM TIGR00810 secG: preprotein translocase, SecG subunit 3 73 3.1E-19 T 22-04-2016 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 SRM_RS11990 21e4bc01c175f5242e00e335ef175418 127 Pfam PF03840 Preprotein translocase SecG subunit 4 72 4.4E-18 T 22-04-2016 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 SRM_RS02700 84df7d1f17a8f86291340b06271c4e40 993 PANTHER PTHR30069 18 595 7.7E-34 T 22-04-2016 SRM_RS02700 84df7d1f17a8f86291340b06271c4e40 993 PANTHER PTHR30069 617 915 7.7E-34 T 22-04-2016 SRM_RS02700 84df7d1f17a8f86291340b06271c4e40 993 TIGRFAM TIGR01782 TonB-Xanth-Caul: TonB-dependent receptor 116 993 2.4E-167 T 22-04-2016 IPR010104 Bacterial TonB-dependent receptor SRM_RS02700 84df7d1f17a8f86291340b06271c4e40 993 SUPERFAMILY SSF49464 31 118 1.18E-19 T 22-04-2016 IPR008969 Carboxypeptidase-like, regulatory domain SRM_RS02700 84df7d1f17a8f86291340b06271c4e40 993 PANTHER PTHR30069:SF11 18 595 7.7E-34 T 22-04-2016 SRM_RS02700 84df7d1f17a8f86291340b06271c4e40 993 PANTHER PTHR30069:SF11 617 915 7.7E-34 T 22-04-2016 SRM_RS02700 84df7d1f17a8f86291340b06271c4e40 993 Pfam PF13715 CarboxypepD_reg-like domain 33 120 2.2E-25 T 22-04-2016 SRM_RS02700 84df7d1f17a8f86291340b06271c4e40 993 Gene3D G3DSA:2.60.40.1120 33 109 1.5E-20 T 22-04-2016 IPR014766 Carboxypeptidase, regulatory domain SRM_RS02700 84df7d1f17a8f86291340b06271c4e40 993 Gene3D G3DSA:2.40.170.20 642 993 4.4E-62 T 22-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 SRM_RS02700 84df7d1f17a8f86291340b06271c4e40 993 Gene3D G3DSA:2.40.170.20 238 578 4.4E-62 T 22-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 SRM_RS02700 84df7d1f17a8f86291340b06271c4e40 993 Pfam PF00593 TonB dependent receptor 706 991 2.5E-23 T 22-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 SRM_RS02700 84df7d1f17a8f86291340b06271c4e40 993 Pfam PF07715 TonB-dependent Receptor Plug Domain 134 237 3.1E-12 T 22-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 SRM_RS02700 84df7d1f17a8f86291340b06271c4e40 993 Gene3D G3DSA:2.170.130.10 117 237 4.3E-14 T 22-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 SRM_RS02700 84df7d1f17a8f86291340b06271c4e40 993 SUPERFAMILY SSF56935 348 555 2.97E-85 T 22-04-2016 SRM_RS02700 84df7d1f17a8f86291340b06271c4e40 993 SUPERFAMILY SSF56935 624 993 2.97E-85 T 22-04-2016 SRM_RS02700 84df7d1f17a8f86291340b06271c4e40 993 SUPERFAMILY SSF56935 108 311 2.97E-85 T 22-04-2016 SRM_RS07285 239f99d7a6150533974727b230d238e8 401 ProSitePatterns PS00737 Thiolases signature 2. 345 361 - T 22-04-2016 IPR020613 Thiolase, conserved site GO:0008152|GO:0016747 SRM_RS07285 239f99d7a6150533974727b230d238e8 401 Gene3D G3DSA:3.40.47.10 188 280 5.1E-62 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 SRM_RS07285 239f99d7a6150533974727b230d238e8 401 Gene3D G3DSA:3.40.47.10 6 129 5.1E-62 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 SRM_RS07285 239f99d7a6150533974727b230d238e8 401 PANTHER PTHR18919:SF87 2 400 3.8E-184 T 22-04-2016 SRM_RS07285 239f99d7a6150533974727b230d238e8 401 ProSitePatterns PS00099 Thiolases active site. 380 393 - T 22-04-2016 IPR020610 Thiolase, active site GO:0008152|GO:0016747 SRM_RS07285 239f99d7a6150533974727b230d238e8 401 ProSitePatterns PS00098 Thiolases acyl-enzyme intermediate signature. 90 108 - T 22-04-2016 IPR020615 Thiolase, acyl-enzyme intermediate active site GO:0008152|GO:0016747 Reactome: REACT_22258 SRM_RS07285 239f99d7a6150533974727b230d238e8 401 Pfam PF02803 Thiolase, C-terminal domain 277 397 6.6E-46 T 22-04-2016 IPR020617 Thiolase, C-terminal GO:0008152|GO:0016747 SRM_RS07285 239f99d7a6150533974727b230d238e8 401 PIRSF PIRSF000429 1 400 1.9E-129 T 22-04-2016 IPR002155 Thiolase GO:0008152|GO:0016747 SRM_RS07285 239f99d7a6150533974727b230d238e8 401 TIGRFAM TIGR01930 AcCoA-C-Actrans: acetyl-CoA C-acyltransferase 9 397 3.6E-134 T 22-04-2016 IPR002155 Thiolase GO:0008152|GO:0016747 SRM_RS07285 239f99d7a6150533974727b230d238e8 401 SUPERFAMILY SSF53901 277 398 2.88E-43 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 SRM_RS07285 239f99d7a6150533974727b230d238e8 401 PANTHER PTHR18919 2 400 3.8E-184 T 22-04-2016 SRM_RS07285 239f99d7a6150533974727b230d238e8 401 Pfam PF00108 Thiolase, N-terminal domain 8 268 7.1E-69 T 22-04-2016 IPR020616 Thiolase, N-terminal GO:0008152|GO:0016747 SRM_RS07285 239f99d7a6150533974727b230d238e8 401 SUPERFAMILY SSF53901 2 272 2.76E-73 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 SRM_RS07285 239f99d7a6150533974727b230d238e8 401 Gene3D G3DSA:3.40.47.10 283 398 4.3E-68 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 SRM_RS07285 239f99d7a6150533974727b230d238e8 401 Gene3D G3DSA:3.40.47.10 146 187 4.3E-68 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 SRM_RS04785 56e953b875885dd3f40604b7b0c2fad9 355 SUPERFAMILY SSF51735 138 313 1.92E-38 T 22-04-2016 IPR016040 NAD(P)-binding domain SRM_RS04785 56e953b875885dd3f40604b7b0c2fad9 355 SMART SM00829 7 343 4.6E-8 T 22-04-2016 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 SRM_RS04785 56e953b875885dd3f40604b7b0c2fad9 355 Gene3D G3DSA:3.40.50.720 170 289 2.7E-35 T 22-04-2016 IPR016040 NAD(P)-binding domain SRM_RS04785 56e953b875885dd3f40604b7b0c2fad9 355 SUPERFAMILY SSF50129 2 167 1.56E-45 T 22-04-2016 IPR011032 GroES-like SRM_RS04785 56e953b875885dd3f40604b7b0c2fad9 355 Pfam PF00107 Zinc-binding dehydrogenase 176 303 4.6E-24 T 22-04-2016 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 SRM_RS04785 56e953b875885dd3f40604b7b0c2fad9 355 Gene3D G3DSA:3.90.180.10 1 169 6.5E-53 T 22-04-2016 IPR011032 GroES-like SRM_RS04785 56e953b875885dd3f40604b7b0c2fad9 355 PANTHER PTHR11695:SF526 13 355 2.4E-118 T 22-04-2016 SRM_RS04785 56e953b875885dd3f40604b7b0c2fad9 355 ProSitePatterns PS00059 Zinc-containing alcohol dehydrogenases signature. 59 73 - T 22-04-2016 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site GO:0008270|GO:0016491|GO:0055114 SRM_RS04785 56e953b875885dd3f40604b7b0c2fad9 355 PANTHER PTHR11695 13 355 2.4E-118 T 22-04-2016 IPR002085 Alcohol dehydrogenase superfamily, zinc-type GO:0008270|GO:0016491|GO:0055114 SRM_RS04785 56e953b875885dd3f40604b7b0c2fad9 355 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 27 128 1.7E-28 T 22-04-2016 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 SRM_RS03820 459674ec6f93af3d56005279348d0474 847 Pfam PF00930 Dipeptidyl peptidase IV (DPP IV) N-terminal region 181 548 6.3E-92 T 22-04-2016 IPR002469 Dipeptidylpeptidase IV, N-terminal domain GO:0006508 SRM_RS03820 459674ec6f93af3d56005279348d0474 847 Gene3D G3DSA:3.40.50.1820 582 837 3.4E-84 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold SRM_RS03820 459674ec6f93af3d56005279348d0474 847 Gene3D G3DSA:2.140.10.30 101 575 1.1E-111 T 22-04-2016 IPR002469 Dipeptidylpeptidase IV, N-terminal domain GO:0006508 SRM_RS03820 459674ec6f93af3d56005279348d0474 847 PANTHER PTHR11731 60 847 8.7E-209 T 22-04-2016 SRM_RS03820 459674ec6f93af3d56005279348d0474 847 ProSitePatterns PS00708 Prolyl endopeptidase family serine active site. 678 708 - T 22-04-2016 IPR002471 Peptidase S9, serine active site GO:0004252|GO:0006508 SRM_RS03820 459674ec6f93af3d56005279348d0474 847 PANTHER PTHR11731:SF110 60 847 8.7E-209 T 22-04-2016 SRM_RS03820 459674ec6f93af3d56005279348d0474 847 Pfam PF00326 Prolyl oligopeptidase family 636 838 9.9E-54 T 22-04-2016 IPR001375 Peptidase S9, prolyl oligopeptidase, catalytic domain GO:0006508|GO:0008236 SRM_RS03820 459674ec6f93af3d56005279348d0474 847 SUPERFAMILY SSF53474 582 837 9.14E-71 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold SRM_RS03820 459674ec6f93af3d56005279348d0474 847 SUPERFAMILY SSF82171 119 574 2.88E-50 T 22-04-2016 SRM_RS01345 5a8c226af4369ace0cec025b88d4ae30 236 Gene3D G3DSA:2.60.40.10 54 138 5.6E-24 T 22-04-2016 IPR013783 Immunoglobulin-like fold SRM_RS01345 5a8c226af4369ace0cec025b88d4ae30 236 Gene3D G3DSA:2.60.40.10 141 228 6.4E-21 T 22-04-2016 IPR013783 Immunoglobulin-like fold SRM_RS01345 5a8c226af4369ace0cec025b88d4ae30 236 SUPERFAMILY SSF49265 51 233 1.04E-13 T 22-04-2016 IPR003961 Fibronectin type III GO:0005515 SRM_RS01345 5a8c226af4369ace0cec025b88d4ae30 236 Pfam PF00041 Fibronectin type III domain 54 130 3.8E-6 T 22-04-2016 IPR003961 Fibronectin type III GO:0005515 SRM_RS01345 5a8c226af4369ace0cec025b88d4ae30 236 SMART SM00060 139 218 5.3 T 22-04-2016 IPR003961 Fibronectin type III GO:0005515 SRM_RS01345 5a8c226af4369ace0cec025b88d4ae30 236 SMART SM00060 52 130 1.6E-5 T 22-04-2016 IPR003961 Fibronectin type III GO:0005515 SRM_RS10830 159504b048dc4f3151565e9018084ca0 245 PANTHER PTHR39200:SF1 1 241 2.7E-31 T 22-04-2016 SRM_RS10830 159504b048dc4f3151565e9018084ca0 245 PANTHER PTHR39200 1 241 2.7E-31 T 22-04-2016 SRM_RS10830 159504b048dc4f3151565e9018084ca0 245 Pfam PF10988 Putative auto-transporter adhesin, head GIN domain 38 229 4.1E-49 T 22-04-2016 IPR021255 Putative auto-transporter adhesin, head GIN domain SRM_RS05640 fc40ddb10603c330afd17245e4b5f28f 378 Pfam PF03480 Bacterial extracellular solute-binding protein, family 7 53 330 9.2E-61 T 22-04-2016 IPR018389 TRAP transporter solute receptor DctP/TeaA GO:0006810|GO:0030288 SRM_RS05640 fc40ddb10603c330afd17245e4b5f28f 378 PANTHER PTHR33376 1 354 3.0E-133 T 22-04-2016 SRM_RS05640 fc40ddb10603c330afd17245e4b5f28f 378 PANTHER PTHR33376:SF5 1 354 3.0E-133 T 22-04-2016 SRM_RS05640 fc40ddb10603c330afd17245e4b5f28f 378 PIRSF PIRSF039026 1 367 4.2E-120 T 22-04-2016 IPR026289 Solute binding protein, mannitol/chloroaromatic system-like SRM_RS11945 7e3646a0dc810a2cbaefd20650a4ef02 506 Pfam PF03916 Polysulphide reductase, NrfD 85 410 1.3E-28 T 22-04-2016 IPR005614 NrfD family SRM_RS11945 7e3646a0dc810a2cbaefd20650a4ef02 506 PANTHER PTHR34856:SF1 47 496 1.1E-236 T 22-04-2016 SRM_RS11945 7e3646a0dc810a2cbaefd20650a4ef02 506 PANTHER PTHR34856 47 496 1.1E-236 T 22-04-2016 SRM_RS08220 a03f2a3ddadf673984a084fc68aafc19 373 SUPERFAMILY SSF102114 26 367 1.88E-64 T 22-04-2016 SRM_RS08220 a03f2a3ddadf673984a084fc68aafc19 373 Gene3D G3DSA:1.10.10.10 330 358 6.5E-4 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SRM_RS08220 a03f2a3ddadf673984a084fc68aafc19 373 PANTHER PTHR13932 2 370 8.3E-71 T 22-04-2016 SRM_RS08220 a03f2a3ddadf673984a084fc68aafc19 373 Pfam PF06969 HemN C-terminal domain 295 357 2.5E-12 T 22-04-2016 IPR010723 HemN, C-terminal SRM_RS08220 a03f2a3ddadf673984a084fc68aafc19 373 Gene3D G3DSA:3.80.30.20 40 191 8.2E-12 T 22-04-2016 IPR023404 Radical SAM, alpha/beta horseshoe SRM_RS08220 a03f2a3ddadf673984a084fc68aafc19 373 SMART SM00729 1 217 1.2E-4 T 22-04-2016 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 SRM_RS15360 3d71865ad8c2827e573e782ca4fc2f9e 249 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 7 187 8.2E-4 T 22-04-2016 SRM_RS15360 3d71865ad8c2827e573e782ca4fc2f9e 249 PANTHER PTHR24319 9 232 9.9E-57 T 22-04-2016 SRM_RS15360 3d71865ad8c2827e573e782ca4fc2f9e 249 Gene3D G3DSA:3.40.50.720 2 231 1.3E-73 T 22-04-2016 IPR016040 NAD(P)-binding domain SRM_RS15360 3d71865ad8c2827e573e782ca4fc2f9e 249 PANTHER PTHR24319:SF32 9 232 9.9E-57 T 22-04-2016 SRM_RS15360 3d71865ad8c2827e573e782ca4fc2f9e 249 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 135 143 1.3E-10 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SRM_RS15360 3d71865ad8c2827e573e782ca4fc2f9e 249 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 155 174 1.3E-10 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SRM_RS15360 3d71865ad8c2827e573e782ca4fc2f9e 249 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 82 93 1.3E-10 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SRM_RS15360 3d71865ad8c2827e573e782ca4fc2f9e 249 PIRSF PIRSF000126 2 238 1.8E-52 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SRM_RS15360 3d71865ad8c2827e573e782ca4fc2f9e 249 Pfam PF00106 short chain dehydrogenase 9 199 4.3E-62 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SRM_RS15360 3d71865ad8c2827e573e782ca4fc2f9e 249 SUPERFAMILY SSF51735 1 233 7.39E-72 T 22-04-2016 IPR016040 NAD(P)-binding domain SRM_RS15360 3d71865ad8c2827e573e782ca4fc2f9e 249 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 155 174 8.9E-30 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SRM_RS15360 3d71865ad8c2827e573e782ca4fc2f9e 249 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 177 194 8.9E-30 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SRM_RS15360 3d71865ad8c2827e573e782ca4fc2f9e 249 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 8 25 8.9E-30 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SRM_RS15360 3d71865ad8c2827e573e782ca4fc2f9e 249 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 82 93 8.9E-30 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SRM_RS15360 3d71865ad8c2827e573e782ca4fc2f9e 249 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 129 145 8.9E-30 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SRM_RS12350 c55cfdc6049a1e32beb2b2ffbd9c70c7 385 SUPERFAMILY SSF56176 68 263 5.61E-31 T 22-04-2016 IPR016166 FAD-binding, type 2 GO:0003824|GO:0016614|GO:0050660|GO:0055114 SRM_RS12350 c55cfdc6049a1e32beb2b2ffbd9c70c7 385 Gene3D G3DSA:3.90.78.10 277 359 4.6E-26 T 22-04-2016 IPR011601 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 SRM_RS12350 c55cfdc6049a1e32beb2b2ffbd9c70c7 385 PANTHER PTHR21071 46 364 6.7E-84 T 22-04-2016 IPR003170 UDP-N-acetylenolpyruvoylglucosamine reductase GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 SRM_RS12350 c55cfdc6049a1e32beb2b2ffbd9c70c7 385 Pfam PF01565 FAD binding domain 84 217 1.1E-15 T 22-04-2016 IPR006094 FAD linked oxidase, N-terminal GO:0016491|GO:0050660|GO:0055114 SRM_RS12350 c55cfdc6049a1e32beb2b2ffbd9c70c7 385 Gene3D G3DSA:3.30.465.10 137 270 2.1E-32 T 22-04-2016 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 GO:0050660 SRM_RS12350 c55cfdc6049a1e32beb2b2ffbd9c70c7 385 Hamap MF_00037 UDP-N-acetylenolpyruvoylglucosamine reductase [murB]. 1 385 85.463 T 22-04-2016 IPR003170 UDP-N-acetylenolpyruvoylglucosamine reductase GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 SRM_RS12350 c55cfdc6049a1e32beb2b2ffbd9c70c7 385 Pfam PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain 259 356 2.7E-22 T 22-04-2016 IPR011601 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 SRM_RS12350 c55cfdc6049a1e32beb2b2ffbd9c70c7 385 Gene3D G3DSA:3.30.43.10 52 129 2.6E-22 T 22-04-2016 IPR016167 FAD-binding, type 2, subdomain 1 GO:0003824|GO:0050660|GO:0055114 SRM_RS12350 c55cfdc6049a1e32beb2b2ffbd9c70c7 385 TIGRFAM TIGR00179 murB: UDP-N-acetylenolpyruvoylglucosamine reductase 69 357 5.3E-55 T 22-04-2016 IPR003170 UDP-N-acetylenolpyruvoylglucosamine reductase GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 SRM_RS12350 c55cfdc6049a1e32beb2b2ffbd9c70c7 385 PANTHER PTHR21071:SF4 46 364 6.7E-84 T 22-04-2016 SRM_RS12350 c55cfdc6049a1e32beb2b2ffbd9c70c7 385 SUPERFAMILY SSF56194 256 359 1.12E-29 T 22-04-2016 IPR011601 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 SRM_RS14190 ccd25cbfa5321e2b8318f5c9a2c685ad 129 Gene3D G3DSA:3.40.30.10 1 103 6.5E-20 T 22-04-2016 IPR012336 Thioredoxin-like fold SRM_RS14190 ccd25cbfa5321e2b8318f5c9a2c685ad 129 ProSitePatterns PS00194 Thioredoxin family active site. 1 19 - T 22-04-2016 IPR017937 Thioredoxin, conserved site GO:0045454 SRM_RS14190 ccd25cbfa5321e2b8318f5c9a2c685ad 129 SUPERFAMILY SSF52833 1 104 4.19E-20 T 22-04-2016 IPR012336 Thioredoxin-like fold SRM_RS14190 ccd25cbfa5321e2b8318f5c9a2c685ad 129 Pfam PF13899 Thioredoxin-like 1 76 1.5E-8 T 22-04-2016 SRM_RS10125 aa7d382fa9400df9adcb0467443db3cb 450 ProSitePatterns PS00714 Sodium:dicarboxylate symporter family signature 2. 317 340 - T 22-04-2016 IPR018107 Sodium:dicarboxylate symporter, conserved site Reactome: REACT_15518|Reactome: REACT_19419 SRM_RS10125 aa7d382fa9400df9adcb0467443db3cb 450 PANTHER PTHR11958 3 427 4.5E-146 T 22-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 SRM_RS10125 aa7d382fa9400df9adcb0467443db3cb 450 Pfam PF00375 Sodium:dicarboxylate symporter family 7 421 1.5E-122 T 22-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 SRM_RS10125 aa7d382fa9400df9adcb0467443db3cb 450 SUPERFAMILY SSF118215 7 422 1.16E-112 T 22-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 SRM_RS10125 aa7d382fa9400df9adcb0467443db3cb 450 PRINTS PR00173 Glutamate-aspartate symporter signature 376 396 2.1E-53 T 22-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 SRM_RS10125 aa7d382fa9400df9adcb0467443db3cb 450 PRINTS PR00173 Glutamate-aspartate symporter signature 205 224 2.1E-53 T 22-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 SRM_RS10125 aa7d382fa9400df9adcb0467443db3cb 450 PRINTS PR00173 Glutamate-aspartate symporter signature 314 340 2.1E-53 T 22-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 SRM_RS10125 aa7d382fa9400df9adcb0467443db3cb 450 PRINTS PR00173 Glutamate-aspartate symporter signature 349 368 2.1E-53 T 22-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 SRM_RS10125 aa7d382fa9400df9adcb0467443db3cb 450 PRINTS PR00173 Glutamate-aspartate symporter signature 48 68 2.1E-53 T 22-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 SRM_RS10125 aa7d382fa9400df9adcb0467443db3cb 450 PRINTS PR00173 Glutamate-aspartate symporter signature 157 179 2.1E-53 T 22-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 SRM_RS10125 aa7d382fa9400df9adcb0467443db3cb 450 PRINTS PR00173 Glutamate-aspartate symporter signature 78 103 2.1E-53 T 22-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 SRM_RS10125 aa7d382fa9400df9adcb0467443db3cb 450 PRINTS PR00173 Glutamate-aspartate symporter signature 5 25 2.1E-53 T 22-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 SRM_RS10125 aa7d382fa9400df9adcb0467443db3cb 450 Gene3D G3DSA:1.10.3860.10 5 426 7.0E-129 T 22-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 SRM_RS04360 d210b1aa7419919ccd3d7274f72f2a72 327 PRINTS PR01713 Nucleotide sugar epimerase signature 281 298 4.2E-15 T 22-04-2016 IPR008089 Nucleotide sugar epimerase GO:0005975|GO:0016857 SRM_RS04360 d210b1aa7419919ccd3d7274f72f2a72 327 PRINTS PR01713 Nucleotide sugar epimerase signature 29 45 4.2E-15 T 22-04-2016 IPR008089 Nucleotide sugar epimerase GO:0005975|GO:0016857 SRM_RS04360 d210b1aa7419919ccd3d7274f72f2a72 327 PRINTS PR01713 Nucleotide sugar epimerase signature 215 230 4.2E-15 T 22-04-2016 IPR008089 Nucleotide sugar epimerase GO:0005975|GO:0016857 SRM_RS04360 d210b1aa7419919ccd3d7274f72f2a72 327 PRINTS PR01713 Nucleotide sugar epimerase signature 242 257 4.2E-15 T 22-04-2016 IPR008089 Nucleotide sugar epimerase GO:0005975|GO:0016857 SRM_RS04360 d210b1aa7419919ccd3d7274f72f2a72 327 PANTHER PTHR10366 2 320 1.9E-124 T 22-04-2016 SRM_RS04360 d210b1aa7419919ccd3d7274f72f2a72 327 SUPERFAMILY SSF51735 1 319 6.82E-93 T 22-04-2016 IPR016040 NAD(P)-binding domain SRM_RS04360 d210b1aa7419919ccd3d7274f72f2a72 327 PANTHER PTHR10366:SF77 2 320 1.9E-124 T 22-04-2016 SRM_RS04360 d210b1aa7419919ccd3d7274f72f2a72 327 Gene3D G3DSA:3.90.25.10 198 317 3.3E-27 T 22-04-2016 SRM_RS04360 d210b1aa7419919ccd3d7274f72f2a72 327 Gene3D G3DSA:3.40.50.720 1 197 3.4E-64 T 22-04-2016 IPR016040 NAD(P)-binding domain SRM_RS04360 d210b1aa7419919ccd3d7274f72f2a72 327 Pfam PF16363 GDP-mannose 4,6 dehydratase 5 310 1.8E-60 T 22-04-2016 IPR016040 NAD(P)-binding domain SRM_RS06525 d23d38542e03c1d35069b57e93281482 122 ProSitePatterns PS00049 Ribosomal protein L14 signature. 60 86 - T 22-04-2016 IPR019972 Ribosomal protein L14P, conserved site SRM_RS06525 d23d38542e03c1d35069b57e93281482 122 Pfam PF00238 Ribosomal protein L14p/L23e 1 122 4.5E-55 T 22-04-2016 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 SRM_RS06525 d23d38542e03c1d35069b57e93281482 122 Hamap MF_01367 50S ribosomal protein L14 [rplN]. 1 122 27.283 T 22-04-2016 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 SRM_RS06525 d23d38542e03c1d35069b57e93281482 122 SUPERFAMILY SSF50193 1 122 7.46E-50 T 22-04-2016 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 SRM_RS06525 d23d38542e03c1d35069b57e93281482 122 PANTHER PTHR11761 1 122 3.0E-76 T 22-04-2016 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 SRM_RS06525 d23d38542e03c1d35069b57e93281482 122 SMART SM01374 1 122 1.8E-85 T 22-04-2016 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 SRM_RS06525 d23d38542e03c1d35069b57e93281482 122 Gene3D G3DSA:2.40.150.20 1 122 9.5E-54 T 22-04-2016 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 SRM_RS06525 d23d38542e03c1d35069b57e93281482 122 TIGRFAM TIGR01067 rplN_bact: ribosomal protein uL14 1 122 6.1E-57 T 22-04-2016 IPR005745 Ribosomal protein L14P, bacterial-type GO:0003735|GO:0006412|GO:0015934 SRM_RS06145 93595b369f53b758df1393b67668faa8 232 Gene3D G3DSA:3.40.50.880 5 225 3.2E-46 T 22-04-2016 IPR029062 Class I glutamine amidotransferase-like SRM_RS06145 93595b369f53b758df1393b67668faa8 232 PANTHER PTHR11922:SF18 20 62 2.1E-42 T 22-04-2016 SRM_RS06145 93595b369f53b758df1393b67668faa8 232 PANTHER PTHR11922:SF18 82 220 2.1E-42 T 22-04-2016 SRM_RS06145 93595b369f53b758df1393b67668faa8 232 PANTHER PTHR11922 20 62 2.1E-42 T 22-04-2016 SRM_RS06145 93595b369f53b758df1393b67668faa8 232 PANTHER PTHR11922 82 220 2.1E-42 T 22-04-2016 SRM_RS06145 93595b369f53b758df1393b67668faa8 232 Pfam PF07722 Peptidase C26 10 206 3.0E-48 T 22-04-2016 IPR011697 Peptidase C26 GO:0006541|GO:0016787 SRM_RS06145 93595b369f53b758df1393b67668faa8 232 SUPERFAMILY SSF52317 14 224 1.78E-42 T 22-04-2016 IPR029062 Class I glutamine amidotransferase-like SRM_RS12370 e4d29976e487ec948e2356da963c92b9 222 PRINTS PR01414 Cytochrome c-type biogenesis protein CcmB signature 158 177 3.8E-12 T 22-04-2016 IPR003544 Cytochrome c-type biogenesis protein CcmB GO:0015232|GO:0015886|GO:0016020|GO:0017004 SRM_RS12370 e4d29976e487ec948e2356da963c92b9 222 PRINTS PR01414 Cytochrome c-type biogenesis protein CcmB signature 56 73 3.8E-12 T 22-04-2016 IPR003544 Cytochrome c-type biogenesis protein CcmB GO:0015232|GO:0015886|GO:0016020|GO:0017004 SRM_RS12370 e4d29976e487ec948e2356da963c92b9 222 PRINTS PR01414 Cytochrome c-type biogenesis protein CcmB signature 31 52 3.8E-12 T 22-04-2016 IPR003544 Cytochrome c-type biogenesis protein CcmB GO:0015232|GO:0015886|GO:0016020|GO:0017004 SRM_RS12370 e4d29976e487ec948e2356da963c92b9 222 Pfam PF03379 CcmB protein 8 208 2.0E-26 T 22-04-2016 IPR003544 Cytochrome c-type biogenesis protein CcmB GO:0015232|GO:0015886|GO:0016020|GO:0017004 SRM_RS12370 e4d29976e487ec948e2356da963c92b9 222 PANTHER PTHR30070:SF1 4 220 8.5E-35 T 22-04-2016 IPR003544 Cytochrome c-type biogenesis protein CcmB GO:0015232|GO:0015886|GO:0016020|GO:0017004 SRM_RS12370 e4d29976e487ec948e2356da963c92b9 222 PANTHER PTHR30070 4 220 8.5E-35 T 22-04-2016 SRM_RS07845 c025eb569eeeaa38995164c91dcd5d26 136 Gene3D G3DSA:2.60.300.12 30 125 1.1E-27 T 22-04-2016 IPR000361 FeS cluster biogenesis SRM_RS07845 c025eb569eeeaa38995164c91dcd5d26 136 ProSitePatterns PS01152 Hypothetical hesB/yadR/yfhF family signature. 117 134 - T 22-04-2016 IPR017870 FeS cluster insertion, C-terminal, conserved site SRM_RS07845 c025eb569eeeaa38995164c91dcd5d26 136 PANTHER PTHR10072 31 134 5.9E-36 T 22-04-2016 SRM_RS07845 c025eb569eeeaa38995164c91dcd5d26 136 Pfam PF01521 Iron-sulphur cluster biosynthesis 31 131 3.9E-18 T 22-04-2016 IPR000361 FeS cluster biogenesis SRM_RS07845 c025eb569eeeaa38995164c91dcd5d26 136 SUPERFAMILY SSF89360 30 125 9.81E-26 T 22-04-2016 IPR000361 FeS cluster biogenesis SRM_RS07845 c025eb569eeeaa38995164c91dcd5d26 136 TIGRFAM TIGR00049 TIGR00049: iron-sulfur cluster assembly accessory protein 31 135 6.9E-32 T 22-04-2016 IPR016092 FeS cluster insertion protein GO:0005198|GO:0016226|GO:0051536 SRM_RS14595 f7de4cc66a3e9546801ef5027b3470c4 92 PANTHER PTHR33293 8 85 3.9E-13 T 22-04-2016 SRM_RS14595 f7de4cc66a3e9546801ef5027b3470c4 92 Pfam PF13384 Homeodomain-like domain 48 85 2.8E-9 T 22-04-2016 SRM_RS14595 f7de4cc66a3e9546801ef5027b3470c4 92 Gene3D G3DSA:1.10.10.60 44 86 3.3E-8 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 SRM_RS14595 f7de4cc66a3e9546801ef5027b3470c4 92 SUPERFAMILY SSF46689 44 88 4.84E-8 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 SRM_RS13720 c8249584b7db030a026471f813d213d3 133 Hamap MF_00454 Putative fluoride ion transporter CrcB [crcB]. 4 121 19.488 T 22-04-2016 IPR003691 Putative fluoride ion transporter CrcB GO:0016021 SRM_RS13720 c8249584b7db030a026471f813d213d3 133 TIGRFAM TIGR00494 crcB: protein CrcB 5 117 1.6E-28 T 22-04-2016 IPR003691 Putative fluoride ion transporter CrcB GO:0016021 SRM_RS13720 c8249584b7db030a026471f813d213d3 133 Pfam PF02537 CrcB-like protein, Camphor Resistance (CrcB) 5 116 2.3E-22 T 22-04-2016 IPR003691 Putative fluoride ion transporter CrcB GO:0016021 SRM_RS13720 c8249584b7db030a026471f813d213d3 133 PANTHER PTHR28259 1 131 2.9E-34 T 22-04-2016 SRM_RS01085 4d6058a277ba9c6d9d033de109b33a88 938 SUPERFAMILY SSF48452 308 341 1.21E-6 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 SRM_RS01085 4d6058a277ba9c6d9d033de109b33a88 938 SUPERFAMILY SSF48452 142 211 1.21E-6 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 SRM_RS01085 4d6058a277ba9c6d9d033de109b33a88 938 Gene3D G3DSA:1.25.40.10 282 387 1.5E-13 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 SRM_RS01085 4d6058a277ba9c6d9d033de109b33a88 938 Gene3D G3DSA:1.25.40.10 109 237 1.5E-13 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 SRM_RS01085 4d6058a277ba9c6d9d033de109b33a88 938 SMART SM00028 139 172 37.0 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 SRM_RS01085 4d6058a277ba9c6d9d033de109b33a88 938 SMART SM00028 178 211 16.0 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 SRM_RS01085 4d6058a277ba9c6d9d033de109b33a88 938 SMART SM00028 308 341 6.6 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 SRM_RS01085 4d6058a277ba9c6d9d033de109b33a88 938 SMART SM00028 348 381 120.0 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 SRM_RS01085 4d6058a277ba9c6d9d033de109b33a88 938 Pfam PF12770 CHAT domain 588 891 5.1E-61 T 22-04-2016 IPR024983 CHAT domain SRM_RS01085 4d6058a277ba9c6d9d033de109b33a88 938 SUPERFAMILY SSF48452 248 425 7.36E-9 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 SRM_RS01085 4d6058a277ba9c6d9d033de109b33a88 938 Pfam PF13424 Tetratricopeptide repeat 310 377 4.6E-8 T 22-04-2016 SRM_RS10135 1f92cca0f8c7828e28c5d36194b34548 1448 Gene3D G3DSA:2.40.40.20 363 390 3.7E-35 T 22-04-2016 SRM_RS10135 1f92cca0f8c7828e28c5d36194b34548 1448 Gene3D G3DSA:2.40.40.20 431 502 3.7E-35 T 22-04-2016 SRM_RS10135 1f92cca0f8c7828e28c5d36194b34548 1448 TIGRFAM TIGR02386 rpoC_TIGR: DNA-directed RNA polymerase, beta' subunit 16 1113 0.0 T 22-04-2016 IPR012754 DNA-directed RNA polymerase, subunit beta-prime GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 SRM_RS10135 1f92cca0f8c7828e28c5d36194b34548 1448 SUPERFAMILY SSF51246 1068 1114 5.02E-5 T 22-04-2016 IPR011054 Rudiment single hybrid motif SRM_RS10135 1f92cca0f8c7828e28c5d36194b34548 1448 Pfam PF04997 RNA polymerase Rpb1, domain 1 12 356 2.9E-86 T 22-04-2016 IPR007080 RNA polymerase Rpb1, domain 1 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 SRM_RS10135 1f92cca0f8c7828e28c5d36194b34548 1448 Pfam PF05000 RNA polymerase Rpb1, domain 4 675 748 2.7E-15 T 22-04-2016 IPR007083 RNA polymerase Rpb1, domain 4 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 SRM_RS10135 1f92cca0f8c7828e28c5d36194b34548 1448 SMART SM00663 249 528 2.8E-167 T 22-04-2016 IPR006592 RNA polymerase, N-terminal GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 SRM_RS10135 1f92cca0f8c7828e28c5d36194b34548 1448 Hamap MF_01322 DNA-directed RNA polymerase subunit beta' [rpoC]. 11 1407 10.261 T 22-04-2016 IPR012754 DNA-directed RNA polymerase, subunit beta-prime GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 SRM_RS10135 1f92cca0f8c7828e28c5d36194b34548 1448 Gene3D G3DSA:2.40.50.100 1071 1112 5.2E-7 T 22-04-2016 SRM_RS10135 1f92cca0f8c7828e28c5d36194b34548 1448 Gene3D G3DSA:2.40.50.100 984 1022 1.1E-5 T 22-04-2016 SRM_RS10135 1f92cca0f8c7828e28c5d36194b34548 1448 Gene3D G3DSA:2.40.50.100 1147 1203 5.0E-10 T 22-04-2016 SRM_RS10135 1f92cca0f8c7828e28c5d36194b34548 1448 Pfam PF04998 RNA polymerase Rpb1, domain 5 766 1296 2.3E-69 T 22-04-2016 IPR007081 RNA polymerase Rpb1, domain 5 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 SRM_RS10135 1f92cca0f8c7828e28c5d36194b34548 1448 Pfam PF04983 RNA polymerase Rpb1, domain 3 503 646 1.3E-21 T 22-04-2016 IPR007066 RNA polymerase Rpb1, domain 3 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 SRM_RS10135 1f92cca0f8c7828e28c5d36194b34548 1448 SUPERFAMILY SSF64484 1124 1284 0.0 T 22-04-2016 SRM_RS10135 1f92cca0f8c7828e28c5d36194b34548 1448 SUPERFAMILY SSF64484 1325 1398 0.0 T 22-04-2016 SRM_RS10135 1f92cca0f8c7828e28c5d36194b34548 1448 SUPERFAMILY SSF64484 12 944 0.0 T 22-04-2016 SRM_RS10135 1f92cca0f8c7828e28c5d36194b34548 1448 Pfam PF00623 RNA polymerase Rpb1, domain 2 358 410 8.4E-9 T 22-04-2016 IPR000722 RNA polymerase, alpha subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 SRM_RS10135 1f92cca0f8c7828e28c5d36194b34548 1448 Pfam PF00623 RNA polymerase Rpb1, domain 2 404 499 4.1E-26 T 22-04-2016 IPR000722 RNA polymerase, alpha subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 SRM_RS05645 b0ddbbc57a3f1d82880f03a2efa39775 241 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 6 190 0.0046 T 22-04-2016 SRM_RS05645 b0ddbbc57a3f1d82880f03a2efa39775 241 Gene3D G3DSA:3.40.50.720 5 224 1.6E-71 T 22-04-2016 IPR016040 NAD(P)-binding domain SRM_RS05645 b0ddbbc57a3f1d82880f03a2efa39775 241 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 143 171 - T 22-04-2016 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 SRM_RS05645 b0ddbbc57a3f1d82880f03a2efa39775 241 PANTHER PTHR24322 156 187 1.1E-52 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SRM_RS05645 b0ddbbc57a3f1d82880f03a2efa39775 241 PANTHER PTHR24322 10 140 1.1E-52 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SRM_RS05645 b0ddbbc57a3f1d82880f03a2efa39775 241 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 7 24 6.9E-27 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SRM_RS05645 b0ddbbc57a3f1d82880f03a2efa39775 241 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 130 146 6.9E-27 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SRM_RS05645 b0ddbbc57a3f1d82880f03a2efa39775 241 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 156 175 6.9E-27 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SRM_RS05645 b0ddbbc57a3f1d82880f03a2efa39775 241 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 78 89 6.9E-27 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SRM_RS05645 b0ddbbc57a3f1d82880f03a2efa39775 241 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 177 194 6.9E-27 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SRM_RS05645 b0ddbbc57a3f1d82880f03a2efa39775 241 SUPERFAMILY SSF51735 1 223 6.25E-73 T 22-04-2016 IPR016040 NAD(P)-binding domain SRM_RS05645 b0ddbbc57a3f1d82880f03a2efa39775 241 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 136 144 1.5E-12 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SRM_RS05645 b0ddbbc57a3f1d82880f03a2efa39775 241 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 156 175 1.5E-12 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SRM_RS05645 b0ddbbc57a3f1d82880f03a2efa39775 241 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 78 89 1.5E-12 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SRM_RS05645 b0ddbbc57a3f1d82880f03a2efa39775 241 Pfam PF00106 short chain dehydrogenase 7 194 2.8E-54 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SRM_RS09445 7c7e4946f7ae11f2ddf5dc21ca2fc466 223 Pfam PF04024 PspC domain 146 204 8.7E-20 T 22-04-2016 IPR007168 Phage shock protein, PspC, N-terminal SRM_RS09445 7c7e4946f7ae11f2ddf5dc21ca2fc466 223 PANTHER PTHR33885 100 214 2.4E-26 T 22-04-2016 SRM_RS02870 3e63ba4baebe9aedae93797e912b1b50 390 Gene3D G3DSA:3.20.20.140 39 387 1.3E-86 T 22-04-2016 SRM_RS02870 3e63ba4baebe9aedae93797e912b1b50 390 SUPERFAMILY SSF51556 45 387 3.77E-71 T 22-04-2016 IPR032466 Metal-dependent hydrolase SRM_RS02870 3e63ba4baebe9aedae93797e912b1b50 390 PANTHER PTHR10443 1 102 2.7E-53 T 22-04-2016 IPR008257 Renal dipeptidase family GO:0006508|GO:0016805 MetaCyc: PWY-7533 SRM_RS02870 3e63ba4baebe9aedae93797e912b1b50 390 PANTHER PTHR10443 130 384 2.7E-53 T 22-04-2016 IPR008257 Renal dipeptidase family GO:0006508|GO:0016805 MetaCyc: PWY-7533 SRM_RS02870 3e63ba4baebe9aedae93797e912b1b50 390 Pfam PF01244 Membrane dipeptidase (Peptidase family M19) 50 384 7.8E-64 T 22-04-2016 IPR008257 Renal dipeptidase family GO:0006508|GO:0016805 MetaCyc: PWY-7533 SRM_RS13535 761533408fbce36b73f2f3766c6101e7 510 PANTHER PTHR32044:SF10 49 304 1.7E-112 T 22-04-2016 SRM_RS13535 761533408fbce36b73f2f3766c6101e7 510 PANTHER PTHR32044 49 304 1.7E-112 T 22-04-2016 SRM_RS13535 761533408fbce36b73f2f3766c6101e7 510 SUPERFAMILY SSF53448 50 303 3.63E-48 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases SRM_RS13535 761533408fbce36b73f2f3766c6101e7 510 Pfam PF13641 Glycosyltransferase like family 2 61 288 1.0E-33 T 22-04-2016 SRM_RS13535 761533408fbce36b73f2f3766c6101e7 510 Gene3D G3DSA:3.90.550.10 59 305 8.0E-31 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases SRM_RS14580 2f1328d5aa10e6d1e14cd83372f632fb 104 SUPERFAMILY SSF101116 4 96 9.68E-19 T 22-04-2016 IPR003713 Flagellar protein FliS GO:0044780 SRM_RS14580 2f1328d5aa10e6d1e14cd83372f632fb 104 Pfam PF02561 Flagellar protein FliS 40 96 1.6E-9 T 22-04-2016 IPR003713 Flagellar protein FliS GO:0044780 SRM_RS14580 2f1328d5aa10e6d1e14cd83372f632fb 104 Gene3D G3DSA:1.20.120.340 2 96 9.3E-19 T 22-04-2016 IPR003713 Flagellar protein FliS GO:0044780 SRM_RS11105 952ca54106d0615cc43737f2ebcd8ce0 985 Pfam PF13183 4Fe-4S dicluster domain 558 635 3.6E-11 T 22-04-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain SRM_RS11105 952ca54106d0615cc43737f2ebcd8ce0 985 Gene3D G3DSA:3.30.465.10 102 191 1.5E-36 T 22-04-2016 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 GO:0050660 SRM_RS11105 952ca54106d0615cc43737f2ebcd8ce0 985 Gene3D G3DSA:3.30.465.10 223 272 1.5E-36 T 22-04-2016 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 GO:0050660 SRM_RS11105 952ca54106d0615cc43737f2ebcd8ce0 985 Gene3D G3DSA:3.30.43.10 6 101 4.1E-20 T 22-04-2016 IPR016167 FAD-binding, type 2, subdomain 1 GO:0003824|GO:0050660|GO:0055114 SRM_RS11105 952ca54106d0615cc43737f2ebcd8ce0 985 PANTHER PTHR11748:SF35 14 190 1.0E-130 T 22-04-2016 SRM_RS11105 952ca54106d0615cc43737f2ebcd8ce0 985 PANTHER PTHR11748:SF35 237 570 1.0E-130 T 22-04-2016 SRM_RS11105 952ca54106d0615cc43737f2ebcd8ce0 985 Pfam PF02913 FAD linked oxidases, C-terminal domain 272 521 3.0E-49 T 22-04-2016 IPR004113 FAD-linked oxidase, C-terminal GO:0003824|GO:0050660 SRM_RS11105 952ca54106d0615cc43737f2ebcd8ce0 985 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 621 632 - T 22-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site SRM_RS11105 952ca54106d0615cc43737f2ebcd8ce0 985 PANTHER PTHR11748 14 190 1.0E-130 T 22-04-2016 SRM_RS11105 952ca54106d0615cc43737f2ebcd8ce0 985 PANTHER PTHR11748 237 570 1.0E-130 T 22-04-2016 SRM_RS11105 952ca54106d0615cc43737f2ebcd8ce0 985 SUPERFAMILY SSF46548 498 640 5.23E-12 T 22-04-2016 IPR009051 Alpha-helical ferredoxin GO:0051536 SRM_RS11105 952ca54106d0615cc43737f2ebcd8ce0 985 Pfam PF01565 FAD binding domain 48 184 1.1E-42 T 22-04-2016 IPR006094 FAD linked oxidase, N-terminal GO:0016491|GO:0050660|GO:0055114 SRM_RS11105 952ca54106d0615cc43737f2ebcd8ce0 985 SUPERFAMILY SSF55103 277 532 1.59E-53 T 22-04-2016 IPR016164 FAD-linked oxidase-like, C-terminal GO:0003824|GO:0050660 SRM_RS11105 952ca54106d0615cc43737f2ebcd8ce0 985 SUPERFAMILY SSF56176 227 272 4.25E-58 T 22-04-2016 IPR016166 FAD-binding, type 2 GO:0003824|GO:0016614|GO:0050660|GO:0055114 SRM_RS11105 952ca54106d0615cc43737f2ebcd8ce0 985 SUPERFAMILY SSF56176 9 184 4.25E-58 T 22-04-2016 IPR016166 FAD-binding, type 2 GO:0003824|GO:0016614|GO:0050660|GO:0055114 SRM_RS11105 952ca54106d0615cc43737f2ebcd8ce0 985 Gene3D G3DSA:1.10.1060.10 498 648 1.8E-14 T 22-04-2016 SRM_RS05220 6459b6104dc8ea5314e7fc3b63961230 571 Gene3D G3DSA:2.30.40.10 511 570 7.4E-10 T 22-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 SRM_RS05220 6459b6104dc8ea5314e7fc3b63961230 571 Pfam PF07969 Amidohydrolase family 70 568 7.4E-90 T 22-04-2016 IPR013108 Amidohydrolase 3 SRM_RS05220 6459b6104dc8ea5314e7fc3b63961230 571 Gene3D G3DSA:3.20.20.140 234 510 2.7E-24 T 22-04-2016 SRM_RS05220 6459b6104dc8ea5314e7fc3b63961230 571 SUPERFAMILY SSF51338 18 82 4.83E-19 T 22-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 SRM_RS05220 6459b6104dc8ea5314e7fc3b63961230 571 SUPERFAMILY SSF51338 527 568 4.83E-19 T 22-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 SRM_RS05220 6459b6104dc8ea5314e7fc3b63961230 571 SUPERFAMILY SSF51556 81 142 2.11E-31 T 22-04-2016 IPR032466 Metal-dependent hydrolase SRM_RS05220 6459b6104dc8ea5314e7fc3b63961230 571 SUPERFAMILY SSF51556 232 528 2.11E-31 T 22-04-2016 IPR032466 Metal-dependent hydrolase SRM_RS05220 6459b6104dc8ea5314e7fc3b63961230 571 Gene3D G3DSA:2.30.40.10 22 102 3.0E-13 T 22-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 SRM_RS05220 6459b6104dc8ea5314e7fc3b63961230 571 PANTHER PTHR22642:SF2 18 571 5.1E-151 T 22-04-2016 SRM_RS05220 6459b6104dc8ea5314e7fc3b63961230 571 PANTHER PTHR22642 18 571 5.1E-151 T 22-04-2016 SRM_RS07225 3cca760ad8df89f8b7a9755e78104424 398 PANTHER PTHR11406 1 398 7.8E-191 T 22-04-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 SRM_RS07225 3cca760ad8df89f8b7a9755e78104424 398 ProSitePatterns PS00111 Phosphoglycerate kinase signature. 15 25 - T 22-04-2016 IPR015911 Phosphoglycerate kinase, conserved site GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 SRM_RS07225 3cca760ad8df89f8b7a9755e78104424 398 Pfam PF00162 Phosphoglycerate kinase 6 386 6.8E-146 T 22-04-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 SRM_RS07225 3cca760ad8df89f8b7a9755e78104424 398 PRINTS PR00477 Phosphoglycerate kinase family signature 314 339 4.2E-71 T 22-04-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 SRM_RS07225 3cca760ad8df89f8b7a9755e78104424 398 PRINTS PR00477 Phosphoglycerate kinase family signature 114 129 4.2E-71 T 22-04-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 SRM_RS07225 3cca760ad8df89f8b7a9755e78104424 398 PRINTS PR00477 Phosphoglycerate kinase family signature 350 361 4.2E-71 T 22-04-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 SRM_RS07225 3cca760ad8df89f8b7a9755e78104424 398 PRINTS PR00477 Phosphoglycerate kinase family signature 10 26 4.2E-71 T 22-04-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 SRM_RS07225 3cca760ad8df89f8b7a9755e78104424 398 PRINTS PR00477 Phosphoglycerate kinase family signature 373 390 4.2E-71 T 22-04-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 SRM_RS07225 3cca760ad8df89f8b7a9755e78104424 398 PRINTS PR00477 Phosphoglycerate kinase family signature 142 164 4.2E-71 T 22-04-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 SRM_RS07225 3cca760ad8df89f8b7a9755e78104424 398 PRINTS PR00477 Phosphoglycerate kinase family signature 196 215 4.2E-71 T 22-04-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 SRM_RS07225 3cca760ad8df89f8b7a9755e78104424 398 PRINTS PR00477 Phosphoglycerate kinase family signature 173 195 4.2E-71 T 22-04-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 SRM_RS07225 3cca760ad8df89f8b7a9755e78104424 398 SUPERFAMILY SSF53748 3 397 6.6E-141 T 22-04-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 SRM_RS07225 3cca760ad8df89f8b7a9755e78104424 398 Gene3D G3DSA:3.40.50.1260 4 184 1.2E-67 T 22-04-2016 IPR015824 Phosphoglycerate kinase, N-terminal GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 SRM_RS07225 3cca760ad8df89f8b7a9755e78104424 398 Hamap MF_00145 Phosphoglycerate kinase [pgk]. 5 397 39.271 T 22-04-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 SRM_RS07225 3cca760ad8df89f8b7a9755e78104424 398 Gene3D G3DSA:3.40.50.1270 185 385 1.2E-71 T 22-04-2016 IPR015901 Phosphoglycerate kinase, C-terminal GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 SRM_RS07225 3cca760ad8df89f8b7a9755e78104424 398 PIRSF PIRSF000724 1 398 5.5E-136 T 22-04-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 SRM_RS04135 c4c89af8688b0fd43dfc4b30c8df837f 92 SUPERFAMILY SSF47598 7 83 6.67E-17 T 22-04-2016 IPR010985 Ribbon-helix-helix GO:0006355 SRM_RS04135 c4c89af8688b0fd43dfc4b30c8df837f 92 Gene3D G3DSA:1.20.5.780 5 89 8.7E-23 T 22-04-2016 SRM_RS04135 c4c89af8688b0fd43dfc4b30c8df837f 92 PANTHER PTHR35401 6 92 4.1E-14 T 22-04-2016 SRM_RS04135 c4c89af8688b0fd43dfc4b30c8df837f 92 Pfam PF08681 Protein of unknown function (DUF1778) 11 86 4.8E-21 T 22-04-2016 IPR014795 Vibrio phage ICP1, Orf50 SRM_RS04390 947c35a22075feef1efd24102da90a86 133 SMART SM01321 16 132 1.7E-30 T 22-04-2016 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 SRM_RS04390 947c35a22075feef1efd24102da90a86 133 Pfam PF01797 Transposase IS200 like 17 132 1.0E-32 T 22-04-2016 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 SRM_RS04390 947c35a22075feef1efd24102da90a86 133 PANTHER PTHR33360 7 133 1.0E-42 T 22-04-2016 SRM_RS04390 947c35a22075feef1efd24102da90a86 133 PANTHER PTHR33360:SF1 7 133 1.0E-42 T 22-04-2016 SRM_RS04390 947c35a22075feef1efd24102da90a86 133 Gene3D G3DSA:3.30.70.1290 6 132 2.4E-36 T 22-04-2016 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 SRM_RS04390 947c35a22075feef1efd24102da90a86 133 SUPERFAMILY SSF143422 9 132 1.18E-35 T 22-04-2016 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 SRM_RS07300 63eb6d12bb8ff7a767f5c9f6cfd0b055 284 PANTHER PTHR24317 5 257 1.2E-50 T 22-04-2016 SRM_RS07300 63eb6d12bb8ff7a767f5c9f6cfd0b055 284 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 162 181 9.1E-5 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SRM_RS07300 63eb6d12bb8ff7a767f5c9f6cfd0b055 284 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 142 150 9.1E-5 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SRM_RS07300 63eb6d12bb8ff7a767f5c9f6cfd0b055 284 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 88 99 9.1E-5 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SRM_RS07300 63eb6d12bb8ff7a767f5c9f6cfd0b055 284 Gene3D G3DSA:3.40.50.720 10 254 6.8E-75 T 22-04-2016 IPR016040 NAD(P)-binding domain SRM_RS07300 63eb6d12bb8ff7a767f5c9f6cfd0b055 284 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 88 99 1.8E-30 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SRM_RS07300 63eb6d12bb8ff7a767f5c9f6cfd0b055 284 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 14 31 1.8E-30 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SRM_RS07300 63eb6d12bb8ff7a767f5c9f6cfd0b055 284 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 219 239 1.8E-30 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SRM_RS07300 63eb6d12bb8ff7a767f5c9f6cfd0b055 284 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 162 181 1.8E-30 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SRM_RS07300 63eb6d12bb8ff7a767f5c9f6cfd0b055 284 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 183 200 1.8E-30 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SRM_RS07300 63eb6d12bb8ff7a767f5c9f6cfd0b055 284 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 136 152 1.8E-30 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SRM_RS07300 63eb6d12bb8ff7a767f5c9f6cfd0b055 284 PANTHER PTHR24317:SF4 5 257 1.2E-50 T 22-04-2016 SRM_RS07300 63eb6d12bb8ff7a767f5c9f6cfd0b055 284 SUPERFAMILY SSF51735 12 255 1.24E-73 T 22-04-2016 IPR016040 NAD(P)-binding domain SRM_RS07300 63eb6d12bb8ff7a767f5c9f6cfd0b055 284 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 22 254 4.8E-53 T 22-04-2016 SRM_RS13050 1beaffdf82dc5ca776c07f76e5cdc43d 348 Gene3D G3DSA:2.120.10.30 32 136 9.1E-8 T 22-04-2016 IPR011042 Six-bladed beta-propeller, TolB-like SRM_RS13050 1beaffdf82dc5ca776c07f76e5cdc43d 348 SUPERFAMILY SSF101898 25 137 1.31E-6 T 22-04-2016 SRM_RS14705 76a8eee2fe888547e2e46077e1e76761 455 Gene3D G3DSA:3.40.50.720 107 424 1.0E-37 T 22-04-2016 IPR016040 NAD(P)-binding domain SRM_RS14705 76a8eee2fe888547e2e46077e1e76761 455 SUPERFAMILY SSF51735 107 390 5.34E-38 T 22-04-2016 IPR016040 NAD(P)-binding domain SRM_RS14705 76a8eee2fe888547e2e46077e1e76761 455 Pfam PF07993 Male sterility protein 108 337 6.0E-46 T 22-04-2016 IPR013120 Male sterility, NAD-binding Reactome: REACT_22258 SRM_RS14705 76a8eee2fe888547e2e46077e1e76761 455 PANTHER PTHR10366 402 424 2.2E-23 T 22-04-2016 SRM_RS14705 76a8eee2fe888547e2e46077e1e76761 455 PANTHER PTHR10366 105 384 2.2E-23 T 22-04-2016 SRM_RS14910 caba4cf1d17850cf1731f3c09cd17f69 410 SUPERFAMILY SSF50965 117 390 9.81E-45 T 22-04-2016 IPR011043 Galactose oxidase/kelch, beta-propeller SRM_RS14910 caba4cf1d17850cf1731f3c09cd17f69 410 SMART SM00612 282 331 1.0E-5 T 22-04-2016 IPR006652 Kelch repeat type 1 GO:0005515 SRM_RS14910 caba4cf1d17850cf1731f3c09cd17f69 410 SMART SM00612 332 381 0.05 T 22-04-2016 IPR006652 Kelch repeat type 1 GO:0005515 SRM_RS14910 caba4cf1d17850cf1731f3c09cd17f69 410 SMART SM00612 244 281 17.0 T 22-04-2016 IPR006652 Kelch repeat type 1 GO:0005515 SRM_RS14910 caba4cf1d17850cf1731f3c09cd17f69 410 SMART SM00612 124 177 0.53 T 22-04-2016 IPR006652 Kelch repeat type 1 GO:0005515 SRM_RS14910 caba4cf1d17850cf1731f3c09cd17f69 410 Pfam PF13415 Galactose oxidase, central domain 331 378 4.3E-8 T 22-04-2016 SRM_RS14910 caba4cf1d17850cf1731f3c09cd17f69 410 PANTHER PTHR24412 124 200 1.4E-45 T 22-04-2016 SRM_RS14910 caba4cf1d17850cf1731f3c09cd17f69 410 PANTHER PTHR24412 252 410 1.4E-45 T 22-04-2016 SRM_RS14910 caba4cf1d17850cf1731f3c09cd17f69 410 Pfam PF01344 Kelch motif 271 318 1.8E-10 T 22-04-2016 IPR006652 Kelch repeat type 1 GO:0005515 SRM_RS14910 caba4cf1d17850cf1731f3c09cd17f69 410 Gene3D G3DSA:2.120.10.80 200 409 7.5E-42 T 22-04-2016 IPR015915 Kelch-type beta propeller GO:0005515 SRM_RS02500 dd60525a1f007e41ed0f08f0a8ef652b 173 Gene3D G3DSA:1.20.1070.10 3 33 7.2E-4 T 22-04-2016 SRM_RS02500 dd60525a1f007e41ed0f08f0a8ef652b 173 PANTHER PTHR22888:SF12 59 165 7.8E-32 T 22-04-2016 SRM_RS02500 dd60525a1f007e41ed0f08f0a8ef652b 173 ProSitePatterns PS00078 CO II and nitrous oxide reductase dinuclear copper centers signature. 105 153 - T 22-04-2016 IPR001505 Copper centre Cu(A) GO:0005507 SRM_RS02500 dd60525a1f007e41ed0f08f0a8ef652b 173 PANTHER PTHR22888 59 165 7.8E-32 T 22-04-2016 SRM_RS02500 dd60525a1f007e41ed0f08f0a8ef652b 173 Pfam PF00116 Cytochrome C oxidase subunit II, periplasmic domain 87 158 1.7E-8 T 22-04-2016 IPR002429 Cytochrome c oxidase subunit II C-terminal GO:0004129|GO:0005507|GO:0016020 SRM_RS02500 dd60525a1f007e41ed0f08f0a8ef652b 173 SUPERFAMILY SSF49503 64 167 1.63E-24 T 22-04-2016 IPR008972 Cupredoxin SRM_RS02500 dd60525a1f007e41ed0f08f0a8ef652b 173 Gene3D G3DSA:2.60.40.420 85 167 8.0E-23 T 22-04-2016 IPR008972 Cupredoxin SRM_RS06540 aaba1fbb285a052cb40494c36f922f89 89 Hamap MF_00537 30S ribosomal protein S14 [rpsN]. 1 89 23.45 T 22-04-2016 IPR023036 Ribosomal protein S14, bacterial/plastid SRM_RS06540 aaba1fbb285a052cb40494c36f922f89 89 SUPERFAMILY SSF57716 2 89 1.14E-29 T 22-04-2016 SRM_RS06540 aaba1fbb285a052cb40494c36f922f89 89 PANTHER PTHR19836 1 89 3.4E-49 T 22-04-2016 IPR001209 Ribosomal protein S14 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SRM_RS06540 aaba1fbb285a052cb40494c36f922f89 89 Gene3D G3DSA:4.10.830.10 33 89 5.1E-31 T 22-04-2016 SRM_RS06540 aaba1fbb285a052cb40494c36f922f89 89 Pfam PF00253 Ribosomal protein S14p/S29e 36 88 2.7E-29 T 22-04-2016 IPR001209 Ribosomal protein S14 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SRM_RS06540 aaba1fbb285a052cb40494c36f922f89 89 ProSitePatterns PS00527 Ribosomal protein S14 signature. 51 73 - T 22-04-2016 IPR018271 Ribosomal protein S14, conserved site GO:0003735|GO:0005840|GO:0006412 SRM_RS09605 221e241d4fa71a2bcfff5beef31d9ec2 502 TIGRFAM TIGR00564 trpE_most: anthranilate synthase component I 31 494 1.2E-172 T 22-04-2016 IPR005256 Anthranilate synthase component I, PabB-like GO:0000162|GO:0004049 KEGG: 00400+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661|UniPathway: UPA00035 SRM_RS09605 221e241d4fa71a2bcfff5beef31d9ec2 502 PRINTS PR00095 Anthranilate synthase component I signature 428 442 6.74E-25 T 22-04-2016 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661|UniPathway: UPA00035 SRM_RS09605 221e241d4fa71a2bcfff5beef31d9ec2 502 PRINTS PR00095 Anthranilate synthase component I signature 348 361 6.74E-25 T 22-04-2016 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661|UniPathway: UPA00035 SRM_RS09605 221e241d4fa71a2bcfff5beef31d9ec2 502 PRINTS PR00095 Anthranilate synthase component I signature 443 457 6.74E-25 T 22-04-2016 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661|UniPathway: UPA00035 SRM_RS09605 221e241d4fa71a2bcfff5beef31d9ec2 502 PRINTS PR00095 Anthranilate synthase component I signature 334 347 6.74E-25 T 22-04-2016 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661|UniPathway: UPA00035 SRM_RS09605 221e241d4fa71a2bcfff5beef31d9ec2 502 PANTHER PTHR11236:SF9 7 499 2.4E-230 T 22-04-2016 SRM_RS09605 221e241d4fa71a2bcfff5beef31d9ec2 502 Pfam PF00425 chorismate binding enzyme 233 486 1.1E-100 T 22-04-2016 IPR015890 Chorismate-utilising enzyme, C-terminal SRM_RS09605 221e241d4fa71a2bcfff5beef31d9ec2 502 Gene3D G3DSA:3.60.120.10 22 498 3.0E-177 T 22-04-2016 IPR005801 ADC synthase GO:0009058 SRM_RS09605 221e241d4fa71a2bcfff5beef31d9ec2 502 SUPERFAMILY SSF56322 23 495 1.05E-161 T 22-04-2016 IPR005801 ADC synthase GO:0009058 SRM_RS09605 221e241d4fa71a2bcfff5beef31d9ec2 502 PANTHER PTHR11236 7 499 2.4E-230 T 22-04-2016 SRM_RS09605 221e241d4fa71a2bcfff5beef31d9ec2 502 Pfam PF04715 Anthranilate synthase component I, N terminal region 32 180 9.1E-34 T 22-04-2016 IPR006805 Anthranilate synthase component I, N-terminal GO:0009058|GO:0016833 KEGG: 00400+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661|UniPathway: UPA00035 SRM_RS05575 1354bf077f6fa9f31dcb0ab297557ac8 248 PANTHER PTHR12993 2 155 3.3E-32 T 22-04-2016 IPR003737 N-acetylglucosaminyl phosphatidylinositol deacetylase-related SRM_RS05575 1354bf077f6fa9f31dcb0ab297557ac8 248 Pfam PF02585 GlcNAc-PI de-N-acetylase 5 134 1.3E-24 T 22-04-2016 IPR003737 N-acetylglucosaminyl phosphatidylinositol deacetylase-related SRM_RS05575 1354bf077f6fa9f31dcb0ab297557ac8 248 SUPERFAMILY SSF102588 2 203 1.44E-41 T 22-04-2016 IPR024078 Putative deacetylase LmbE-like domain SRM_RS05575 1354bf077f6fa9f31dcb0ab297557ac8 248 Gene3D G3DSA:3.40.50.10320 3 202 5.5E-40 T 22-04-2016 IPR024078 Putative deacetylase LmbE-like domain SRM_RS10325 feb9f4184988c69675c0d0ac068f4e85 788 PANTHER PTHR11451:SF29 14 256 4.5E-193 T 22-04-2016 SRM_RS10325 feb9f4184988c69675c0d0ac068f4e85 788 SUPERFAMILY SSF89095 612 712 1.44E-19 T 22-04-2016 IPR003789 Aspartyl/glutamyl-tRNA amidotransferase subunit B-related GO:0016884 SRM_RS10325 feb9f4184988c69675c0d0ac068f4e85 788 Gene3D G3DSA:3.40.50.620 221 275 1.9E-36 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold SRM_RS10325 feb9f4184988c69675c0d0ac068f4e85 788 Gene3D G3DSA:3.40.50.620 33 105 1.9E-36 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold SRM_RS10325 feb9f4184988c69675c0d0ac068f4e85 788 Hamap MF_00126 Glutamine--tRNA ligase [glnS]. 3 565 48.604 T 22-04-2016 IPR022861 Glutamine-tRNA ligase, bacterial GO:0004819 KEGG: 00970+6.1.1.18 SRM_RS10325 feb9f4184988c69675c0d0ac068f4e85 788 SUPERFAMILY SSF52374 33 359 3.85E-87 T 22-04-2016 SRM_RS10325 feb9f4184988c69675c0d0ac068f4e85 788 Gene3D G3DSA:2.40.240.10 477 563 3.4E-28 T 22-04-2016 IPR020056 Ribosomal protein L25/Gln-tRNA synthetase, beta-barrel domain Reactome: REACT_71 SRM_RS10325 feb9f4184988c69675c0d0ac068f4e85 788 SMART SM00845 639 784 1.6E-54 T 22-04-2016 IPR018027 Asn/Gln amidotransferase GO:0016884 SRM_RS10325 feb9f4184988c69675c0d0ac068f4e85 788 Gene3D G3DSA:3.90.800.10 110 218 1.2E-45 T 22-04-2016 SRM_RS10325 feb9f4184988c69675c0d0ac068f4e85 788 Gene3D G3DSA:2.40.240.10 361 476 1.0E-37 T 22-04-2016 IPR020056 Ribosomal protein L25/Gln-tRNA synthetase, beta-barrel domain Reactome: REACT_71 SRM_RS10325 feb9f4184988c69675c0d0ac068f4e85 788 TIGRFAM TIGR00440 glnS: glutamine--tRNA ligase 33 565 1.1E-210 T 22-04-2016 IPR004514 Glutamine-tRNA synthetase GO:0000166|GO:0004819|GO:0005524|GO:0005737|GO:0006425 KEGG: 00970+6.1.1.18 SRM_RS10325 feb9f4184988c69675c0d0ac068f4e85 788 Pfam PF02637 GatB domain 640 784 9.3E-38 T 22-04-2016 IPR018027 Asn/Gln amidotransferase GO:0016884 SRM_RS10325 feb9f4184988c69675c0d0ac068f4e85 788 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 39 50 - T 22-04-2016 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 SRM_RS10325 feb9f4184988c69675c0d0ac068f4e85 788 SUPERFAMILY SSF50715 353 563 4.13E-61 T 22-04-2016 IPR011035 Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain GO:0006412 Reactome: REACT_71 SRM_RS10325 feb9f4184988c69675c0d0ac068f4e85 788 PANTHER PTHR11451:SF29 280 599 4.5E-193 T 22-04-2016 SRM_RS10325 feb9f4184988c69675c0d0ac068f4e85 788 Pfam PF00749 tRNA synthetases class I (E and Q), catalytic domain 33 349 6.5E-97 T 22-04-2016 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain GO:0005524|GO:0016876|GO:0043039 Reactome: REACT_71 SRM_RS10325 feb9f4184988c69675c0d0ac068f4e85 788 Pfam PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain 353 543 4.6E-50 T 22-04-2016 IPR020059 Glutamyl/glutaminyl-tRNA synthetase, class Ib, anti-codon binding domain GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0006418 Reactome: REACT_71 SRM_RS10325 feb9f4184988c69675c0d0ac068f4e85 788 PANTHER PTHR11451 280 599 4.5E-193 T 22-04-2016 SRM_RS10325 feb9f4184988c69675c0d0ac068f4e85 788 PANTHER PTHR11451 14 256 4.5E-193 T 22-04-2016 SRM_RS10325 feb9f4184988c69675c0d0ac068f4e85 788 Gene3D G3DSA:1.10.1160.10 276 351 4.6E-32 T 22-04-2016 IPR020061 Glutamyl/glutaminyl-tRNA synthetase, class Ib, alpha-bundle domain GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0006418 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188|Reactome: REACT_71 SRM_RS08075 2f20f7bd023bf70406e9b64780fa02f4 357 SUPERFAMILY SSF75620 10 354 6.54E-128 T 22-04-2016 SRM_RS08075 2f20f7bd023bf70406e9b64780fa02f4 357 Pfam PF03462 PCRF domain 11 203 6.0E-71 T 22-04-2016 IPR005139 Peptide chain release factor GO:0005737|GO:0006415|GO:0016149 SRM_RS08075 2f20f7bd023bf70406e9b64780fa02f4 357 SMART SM00937 65 178 1.4E-50 T 22-04-2016 IPR005139 Peptide chain release factor GO:0005737|GO:0006415|GO:0016149 SRM_RS08075 2f20f7bd023bf70406e9b64780fa02f4 357 PANTHER PTHR11075:SF9 5 357 5.2E-167 T 22-04-2016 SRM_RS08075 2f20f7bd023bf70406e9b64780fa02f4 357 Gene3D G3DSA:1.20.58.410 6 93 1.1E-19 T 22-04-2016 SRM_RS08075 2f20f7bd023bf70406e9b64780fa02f4 357 TIGRFAM TIGR00019 prfA: peptide chain release factor 1 5 356 2.9E-148 T 22-04-2016 IPR004373 Peptide chain release factor 1 GO:0005737|GO:0006415|GO:0016149 SRM_RS08075 2f20f7bd023bf70406e9b64780fa02f4 357 Gene3D G3DSA:3.30.160.20 210 288 5.6E-33 T 22-04-2016 IPR014720 Double-stranded RNA-binding domain SRM_RS08075 2f20f7bd023bf70406e9b64780fa02f4 357 Pfam PF00472 RF-1 domain 211 320 6.2E-40 T 22-04-2016 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 SRM_RS08075 2f20f7bd023bf70406e9b64780fa02f4 357 Hamap MF_00093 Peptide chain release factor 1 [prfA]. 3 357 38.837 T 22-04-2016 IPR004373 Peptide chain release factor 1 GO:0005737|GO:0006415|GO:0016149 SRM_RS08075 2f20f7bd023bf70406e9b64780fa02f4 357 PANTHER PTHR11075 5 357 5.2E-167 T 22-04-2016 SRM_RS07205 3383b3fd98ce7d321f31f521abee0c38 297 PANTHER PTHR12737:SF20 23 296 2.2E-59 T 22-04-2016 SRM_RS07205 3383b3fd98ce7d321f31f521abee0c38 297 Gene3D G3DSA:3.75.10.10 22 295 1.4E-50 T 22-04-2016 SRM_RS07205 3383b3fd98ce7d321f31f521abee0c38 297 Pfam PF02274 Amidinotransferase 81 297 8.5E-18 T 22-04-2016 SRM_RS07205 3383b3fd98ce7d321f31f521abee0c38 297 PANTHER PTHR12737 23 296 2.2E-59 T 22-04-2016 IPR033199 Dimethylarginine dimethylaminohydrolase/arginine deiminase KEGG: 00220+3.5.3.6|MetaCyc: PWY-4981|UniPathway: UPA00254 SRM_RS07205 3383b3fd98ce7d321f31f521abee0c38 297 SUPERFAMILY SSF55909 27 296 8.29E-43 T 22-04-2016 SRM_RS08130 50f3040aaa323eb84bfc31599ebc39a1 1035 Pfam PF01433 Peptidase family M1 318 404 3.2E-6 T 22-04-2016 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 SRM_RS08130 50f3040aaa323eb84bfc31599ebc39a1 1035 Gene3D G3DSA:1.10.390.10 381 506 1.6E-10 T 22-04-2016 SRM_RS08130 50f3040aaa323eb84bfc31599ebc39a1 1035 Gene3D G3DSA:2.40.160.50 824 872 9.1E-4 T 22-04-2016 SRM_RS08130 50f3040aaa323eb84bfc31599ebc39a1 1035 Gene3D G3DSA:2.40.160.50 909 1030 9.1E-4 T 22-04-2016 SRM_RS08130 50f3040aaa323eb84bfc31599ebc39a1 1035 SUPERFAMILY SSF55486 281 507 4.25E-29 T 22-04-2016 SRM_RS03080 c88a75b538673f79ba30fee8086ec397 331 Pfam PF04069 Substrate binding domain of ABC-type glycine betaine transport system 44 293 2.7E-44 T 22-04-2016 IPR007210 ABC-type glycine betaine transport system, substrate-binding domain GO:0005215|GO:0006810 SRM_RS03080 c88a75b538673f79ba30fee8086ec397 331 PANTHER PTHR30177 40 298 7.0E-37 T 22-04-2016 SRM_RS03080 c88a75b538673f79ba30fee8086ec397 331 Gene3D G3DSA:3.40.190.100 126 252 1.3E-23 T 22-04-2016 SRM_RS03080 c88a75b538673f79ba30fee8086ec397 331 SUPERFAMILY SSF53850 43 305 1.59E-54 T 22-04-2016 SRM_RS03080 c88a75b538673f79ba30fee8086ec397 331 PANTHER PTHR30177:SF0 40 298 7.0E-37 T 22-04-2016 SRM_RS03080 c88a75b538673f79ba30fee8086ec397 331 Gene3D G3DSA:3.40.190.10 40 123 5.7E-13 T 22-04-2016 SRM_RS02175 43d949a0a7491dc76304c88bc3de4d24 929 Pfam PF07715 TonB-dependent Receptor Plug Domain 50 170 9.5E-23 T 22-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 SRM_RS02175 43d949a0a7491dc76304c88bc3de4d24 929 PANTHER PTHR11532 368 927 1.2E-106 T 22-04-2016 SRM_RS02175 43d949a0a7491dc76304c88bc3de4d24 929 PANTHER PTHR11532:SF57 368 927 1.2E-106 T 22-04-2016 SRM_RS02175 43d949a0a7491dc76304c88bc3de4d24 929 PANTHER PTHR11532:SF57 1 286 1.2E-106 T 22-04-2016 SRM_RS02175 43d949a0a7491dc76304c88bc3de4d24 929 Gene3D G3DSA:2.170.130.10 37 170 5.7E-26 T 22-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 SRM_RS02175 43d949a0a7491dc76304c88bc3de4d24 929 PANTHER PTHR11532 1 286 1.2E-106 T 22-04-2016 SRM_RS02175 43d949a0a7491dc76304c88bc3de4d24 929 Gene3D G3DSA:2.40.170.20 171 190 1.2E-53 T 22-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 SRM_RS02175 43d949a0a7491dc76304c88bc3de4d24 929 Gene3D G3DSA:2.40.170.20 775 929 1.2E-53 T 22-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 SRM_RS02175 43d949a0a7491dc76304c88bc3de4d24 929 Gene3D G3DSA:2.40.170.20 241 701 1.2E-53 T 22-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 SRM_RS02175 43d949a0a7491dc76304c88bc3de4d24 929 SUPERFAMILY SSF56935 766 811 1.32E-91 T 22-04-2016 SRM_RS02175 43d949a0a7491dc76304c88bc3de4d24 929 SUPERFAMILY SSF56935 36 194 1.32E-91 T 22-04-2016 SRM_RS02175 43d949a0a7491dc76304c88bc3de4d24 929 SUPERFAMILY SSF56935 352 687 1.32E-91 T 22-04-2016 SRM_RS02175 43d949a0a7491dc76304c88bc3de4d24 929 SUPERFAMILY SSF56935 839 929 1.32E-91 T 22-04-2016 SRM_RS02175 43d949a0a7491dc76304c88bc3de4d24 929 SUPERFAMILY SSF56935 232 320 1.32E-91 T 22-04-2016 SRM_RS02175 43d949a0a7491dc76304c88bc3de4d24 929 TIGRFAM TIGR04056 OMP_RagA_SusC: TonB-linked outer membrane protein, SusC/RagA family 1 929 3.0E-152 T 22-04-2016 IPR023996 TonB-dependent outer membrane protein, SusC/RagA UniPathway: UPA00153 SRM_RS02300 c5168e3deb4ab05a3a1b6880c026a293 357 Pfam PF13469 Sulfotransferase family 48 310 1.5E-9 T 22-04-2016 SRM_RS02300 c5168e3deb4ab05a3a1b6880c026a293 357 Gene3D G3DSA:3.40.50.300 269 315 2.2E-10 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SRM_RS02300 c5168e3deb4ab05a3a1b6880c026a293 357 Gene3D G3DSA:3.40.50.300 176 237 2.2E-10 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SRM_RS02300 c5168e3deb4ab05a3a1b6880c026a293 357 Gene3D G3DSA:3.40.50.300 28 118 2.2E-10 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SRM_RS02300 c5168e3deb4ab05a3a1b6880c026a293 357 SUPERFAMILY SSF52540 266 314 1.1E-17 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SRM_RS02300 c5168e3deb4ab05a3a1b6880c026a293 357 SUPERFAMILY SSF52540 138 237 1.1E-17 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SRM_RS02300 c5168e3deb4ab05a3a1b6880c026a293 357 SUPERFAMILY SSF52540 45 91 1.1E-17 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SRM_RS15105 02fe0122c2cf72185789ba157bd20a69 640 ProSitePatterns PS00430 TonB-dependent receptor proteins signature 1. 1 43 - T 22-04-2016 IPR010916 TonB box, conserved site SRM_RS15105 02fe0122c2cf72185789ba157bd20a69 640 SUPERFAMILY SSF56935 38 638 7.94E-79 T 22-04-2016 SRM_RS15105 02fe0122c2cf72185789ba157bd20a69 640 Gene3D G3DSA:2.170.130.10 34 164 4.4E-31 T 22-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 SRM_RS15105 02fe0122c2cf72185789ba157bd20a69 640 Pfam PF07715 TonB-dependent Receptor Plug Domain 50 156 3.4E-22 T 22-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 SRM_RS15105 02fe0122c2cf72185789ba157bd20a69 640 PANTHER PTHR32552 6 640 4.2E-25 T 22-04-2016 SRM_RS15105 02fe0122c2cf72185789ba157bd20a69 640 Gene3D G3DSA:2.40.170.20 170 638 2.9E-52 T 22-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 SRM_RS15105 02fe0122c2cf72185789ba157bd20a69 640 Pfam PF00593 TonB dependent receptor 404 638 2.8E-22 T 22-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 SRM_RS04935 4482255c16680346d18c672163717dd5 491 TIGRFAM TIGR02734 crtI_fam: phytoene desaturase 8 489 9.8E-138 T 22-04-2016 IPR014105 Carotenoid/retinoid oxidoreductase GO:0016117|GO:0055114 SRM_RS04935 4482255c16680346d18c672163717dd5 491 SUPERFAMILY SSF51905 447 487 5.67E-70 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SRM_RS04935 4482255c16680346d18c672163717dd5 491 SUPERFAMILY SSF51905 6 319 5.67E-70 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SRM_RS04935 4482255c16680346d18c672163717dd5 491 PRINTS PR00419 Adrenodoxin reductase family signature 29 42 3.0E-5 T 22-04-2016 SRM_RS04935 4482255c16680346d18c672163717dd5 491 PRINTS PR00419 Adrenodoxin reductase family signature 6 28 3.0E-5 T 22-04-2016 SRM_RS04935 4482255c16680346d18c672163717dd5 491 Gene3D G3DSA:3.50.50.60 7 108 1.3E-35 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SRM_RS04935 4482255c16680346d18c672163717dd5 491 Gene3D G3DSA:3.50.50.60 215 355 1.3E-35 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SRM_RS04935 4482255c16680346d18c672163717dd5 491 PANTHER PTHR10668:SF4 9 488 7.0E-121 T 22-04-2016 SRM_RS04935 4482255c16680346d18c672163717dd5 491 PANTHER PTHR10668 9 488 7.0E-121 T 22-04-2016 SRM_RS04935 4482255c16680346d18c672163717dd5 491 Pfam PF01593 Flavin containing amine oxidoreductase 14 485 8.2E-32 T 22-04-2016 IPR002937 Amine oxidase GO:0016491|GO:0055114 SRM_RS00945 07c60d620442442bac92e51bf4294411 312 PIRSF PIRSF000446 1 312 2.8E-86 T 22-04-2016 IPR024925 Malonyl CoA-acyl carrier protein transacylase KEGG: 00061+2.3.1.39|MetaCyc: PWY-4381|MetaCyc: PWY-6799|MetaCyc: PWY-7388|UniPathway: UPA00094 SRM_RS00945 07c60d620442442bac92e51bf4294411 312 Gene3D G3DSA:3.30.70.250 132 198 6.0E-23 T 22-04-2016 SRM_RS00945 07c60d620442442bac92e51bf4294411 312 SMART SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. 6 305 6.3E-52 T 22-04-2016 IPR020801 Polyketide synthase, acyl transferase domain SRM_RS00945 07c60d620442442bac92e51bf4294411 312 SUPERFAMILY SSF52151 192 305 6.02E-71 T 22-04-2016 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase GO:0008152 SRM_RS00945 07c60d620442442bac92e51bf4294411 312 SUPERFAMILY SSF52151 3 126 6.02E-71 T 22-04-2016 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase GO:0008152 SRM_RS00945 07c60d620442442bac92e51bf4294411 312 Gene3D G3DSA:3.40.366.10 3 126 4.5E-72 T 22-04-2016 IPR001227 Acyl transferase domain GO:0008152|GO:0016740 SRM_RS00945 07c60d620442442bac92e51bf4294411 312 Gene3D G3DSA:3.40.366.10 199 294 4.5E-72 T 22-04-2016 IPR001227 Acyl transferase domain GO:0008152|GO:0016740 SRM_RS00945 07c60d620442442bac92e51bf4294411 312 Pfam PF00698 Acyl transferase domain 5 295 1.3E-44 T 22-04-2016 IPR014043 Acyl transferase SRM_RS00945 07c60d620442442bac92e51bf4294411 312 PANTHER PTHR10982 3 311 5.3E-127 T 22-04-2016 SRM_RS00945 07c60d620442442bac92e51bf4294411 312 TIGRFAM TIGR00128 fabD: malonyl CoA-acyl carrier protein transacylase 2 292 3.5E-92 T 22-04-2016 IPR004410 Malonyl CoA-acyl carrier protein transacylase, FabD-type GO:0004314 KEGG: 00061+2.3.1.39|MetaCyc: PWY-4381|MetaCyc: PWY-6799|MetaCyc: PWY-7388 SRM_RS00945 07c60d620442442bac92e51bf4294411 312 SUPERFAMILY SSF55048 133 199 7.85E-15 T 22-04-2016 IPR016036 Malonyl-CoA ACP transacylase, ACP-binding GO:0003824|GO:0008152 SRM_RS06080 3d869faa83cc92e47d5a9e6cafe09f48 942 SUPERFAMILY SSF56059 128 401 6.72E-100 T 22-04-2016 SRM_RS06080 3d869faa83cc92e47d5a9e6cafe09f48 942 Gene3D G3DSA:3.40.50.20 538 661 4.8E-54 T 22-04-2016 IPR016185 Pre-ATP-grasp domain SRM_RS06080 3d869faa83cc92e47d5a9e6cafe09f48 942 Gene3D G3DSA:1.10.1030.10 400 537 2.6E-45 T 22-04-2016 IPR005480 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 SRM_RS06080 3d869faa83cc92e47d5a9e6cafe09f48 942 TIGRFAM TIGR01369 CPSaseII_lrg: carbamoyl-phosphate synthase, large subunit 2 924 0.0 T 22-04-2016 IPR006275 Carbamoyl-phosphate synthase, large subunit GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 SRM_RS06080 3d869faa83cc92e47d5a9e6cafe09f48 942 Gene3D G3DSA:3.30.470.20 201 399 8.2E-72 T 22-04-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 SRM_RS06080 3d869faa83cc92e47d5a9e6cafe09f48 942 Gene3D G3DSA:3.30.470.20 745 924 6.3E-62 T 22-04-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 SRM_RS06080 3d869faa83cc92e47d5a9e6cafe09f48 942 PANTHER PTHR11405:SF5 1 920 0.0 T 22-04-2016 SRM_RS06080 3d869faa83cc92e47d5a9e6cafe09f48 942 SMART SM01096 421 546 3.8E-60 T 22-04-2016 IPR005480 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 SRM_RS06080 3d869faa83cc92e47d5a9e6cafe09f48 942 PANTHER PTHR11405 1 920 0.0 T 22-04-2016 SRM_RS06080 3d869faa83cc92e47d5a9e6cafe09f48 942 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 298 327 2.1E-63 T 22-04-2016 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 SRM_RS06080 3d869faa83cc92e47d5a9e6cafe09f48 942 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 169 181 2.1E-63 T 22-04-2016 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 SRM_RS06080 3d869faa83cc92e47d5a9e6cafe09f48 942 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 48 58 2.1E-63 T 22-04-2016 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 SRM_RS06080 3d869faa83cc92e47d5a9e6cafe09f48 942 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 19 33 2.1E-63 T 22-04-2016 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 SRM_RS06080 3d869faa83cc92e47d5a9e6cafe09f48 942 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 205 224 2.1E-63 T 22-04-2016 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 SRM_RS06080 3d869faa83cc92e47d5a9e6cafe09f48 942 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 240 257 2.1E-63 T 22-04-2016 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 SRM_RS06080 3d869faa83cc92e47d5a9e6cafe09f48 942 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 380 398 2.1E-63 T 22-04-2016 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 SRM_RS06080 3d869faa83cc92e47d5a9e6cafe09f48 942 SUPERFAMILY SSF52440 555 673 4.89E-44 T 22-04-2016 IPR016185 Pre-ATP-grasp domain SRM_RS06080 3d869faa83cc92e47d5a9e6cafe09f48 942 Pfam PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain 424 546 2.8E-39 T 22-04-2016 IPR005480 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 SRM_RS06080 3d869faa83cc92e47d5a9e6cafe09f48 942 SUPERFAMILY SSF56059 672 920 9.9E-89 T 22-04-2016 SRM_RS06080 3d869faa83cc92e47d5a9e6cafe09f48 942 Gene3D G3DSA:3.30.1490.20 685 744 4.4E-24 T 22-04-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 SRM_RS06080 3d869faa83cc92e47d5a9e6cafe09f48 942 Gene3D G3DSA:3.30.1490.20 142 200 1.1E-20 T 22-04-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 SRM_RS06080 3d869faa83cc92e47d5a9e6cafe09f48 942 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 298 305 - T 22-04-2016 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 SRM_RS06080 3d869faa83cc92e47d5a9e6cafe09f48 942 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 837 844 - T 22-04-2016 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 SRM_RS06080 3d869faa83cc92e47d5a9e6cafe09f48 942 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 672 873 4.0E-32 T 22-04-2016 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 SRM_RS06080 3d869faa83cc92e47d5a9e6cafe09f48 942 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 128 335 5.0E-62 T 22-04-2016 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 SRM_RS06080 3d869faa83cc92e47d5a9e6cafe09f48 942 Gene3D G3DSA:3.40.50.20 3 107 5.7E-39 T 22-04-2016 IPR016185 Pre-ATP-grasp domain SRM_RS06080 3d869faa83cc92e47d5a9e6cafe09f48 942 SUPERFAMILY SSF52440 1 127 4.6E-42 T 22-04-2016 IPR016185 Pre-ATP-grasp domain SRM_RS06080 3d869faa83cc92e47d5a9e6cafe09f48 942 SUPERFAMILY SSF48108 396 552 2.88E-46 T 22-04-2016 IPR005480 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 SRM_RS16045 b10f53580ac4d7f0eb502ca5c71afe97 431 SUPERFAMILY SSF53927 305 425 1.18E-22 T 22-04-2016 IPR016193 Cytidine deaminase-like GO:0003824 SRM_RS16045 b10f53580ac4d7f0eb502ca5c71afe97 431 Gene3D G3DSA:3.40.140.10 176 246 1.2E-11 T 22-04-2016 SRM_RS16045 b10f53580ac4d7f0eb502ca5c71afe97 431 PANTHER PTHR11644 305 429 1.6E-18 T 22-04-2016 SRM_RS16045 b10f53580ac4d7f0eb502ca5c71afe97 431 Pfam PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region 305 397 7.3E-6 T 22-04-2016 IPR002125 Cytidine and deoxycytidylate deaminases, zinc-binding GO:0008270 SRM_RS16045 b10f53580ac4d7f0eb502ca5c71afe97 431 Pfam PF08211 Cytidine and deoxycytidylate deaminase zinc-binding region 176 244 7.8E-6 T 22-04-2016 IPR013171 Cytidine/deoxycytidylate deaminase, zinc-binding domain GO:0004126|GO:0008270|GO:0009972 KEGG: 00240+3.5.4.5|KEGG: 00983+3.5.4.5|MetaCyc: PWY-6556|MetaCyc: PWY-7181|MetaCyc: PWY-7193|MetaCyc: PWY-7199 SRM_RS16045 b10f53580ac4d7f0eb502ca5c71afe97 431 PANTHER PTHR11644:SF2 305 429 1.6E-18 T 22-04-2016 SRM_RS16045 b10f53580ac4d7f0eb502ca5c71afe97 431 Gene3D G3DSA:3.40.140.10 305 423 2.6E-23 T 22-04-2016 SRM_RS16045 b10f53580ac4d7f0eb502ca5c71afe97 431 SUPERFAMILY SSF53927 176 246 6.48E-13 T 22-04-2016 IPR016193 Cytidine deaminase-like GO:0003824 SRM_RS11485 8bc9a33c588ee04e53778d383c9e629e 122 PANTHER PTHR11819:SF77 4 116 4.8E-51 T 22-04-2016 SRM_RS11485 8bc9a33c588ee04e53778d383c9e629e 122 Pfam PF00474 Sodium:solute symporter family 36 118 1.4E-5 T 22-04-2016 IPR001734 Sodium/solute symporter GO:0005215|GO:0006810|GO:0016020|GO:0055085 SRM_RS11485 8bc9a33c588ee04e53778d383c9e629e 122 PANTHER PTHR11819 4 116 4.8E-51 T 22-04-2016 IPR001734 Sodium/solute symporter GO:0005215|GO:0006810|GO:0016020|GO:0055085 SRM_RS15760 ed129fcfa04faee7e4fe2d919eb06f85 505 PANTHER PTHR35148 12 502 1.8E-53 T 22-04-2016 SRM_RS15760 ed129fcfa04faee7e4fe2d919eb06f85 505 Pfam PF12771 Starch-binding associating with outer membrane 20 503 1.2E-81 T 22-04-2016 SRM_RS15760 ed129fcfa04faee7e4fe2d919eb06f85 505 SUPERFAMILY SSF48452 31 502 1.64E-126 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 SRM_RS06610 6b1f8db6d36b6d544f53a41b76d537c6 746 Pfam PF04607 Region found in RelA / SpoT proteins 254 369 5.4E-35 T 22-04-2016 IPR007685 RelA/SpoT GO:0015969 SRM_RS06610 6b1f8db6d36b6d544f53a41b76d537c6 746 SUPERFAMILY SSF81301 200 415 1.34E-60 T 22-04-2016 SRM_RS06610 6b1f8db6d36b6d544f53a41b76d537c6 746 Gene3D G3DSA:3.30.460.10 197 348 1.9E-46 T 22-04-2016 SRM_RS06610 6b1f8db6d36b6d544f53a41b76d537c6 746 SUPERFAMILY SSF109604 23 209 1.18E-58 T 22-04-2016 SRM_RS06610 6b1f8db6d36b6d544f53a41b76d537c6 746 PANTHER PTHR21262:SF0 8 746 1.3E-295 T 22-04-2016 SRM_RS06610 6b1f8db6d36b6d544f53a41b76d537c6 746 Pfam PF13291 ACT domain 668 743 3.3E-20 T 22-04-2016 IPR002912 ACT domain GO:0008152|GO:0016597 SRM_RS06610 6b1f8db6d36b6d544f53a41b76d537c6 746 Pfam PF13328 HD domain 48 194 1.5E-41 T 22-04-2016 IPR003607 HD/PDEase domain SRM_RS06610 6b1f8db6d36b6d544f53a41b76d537c6 746 Gene3D G3DSA:3.10.20.30 410 472 3.6E-23 T 22-04-2016 IPR012675 Beta-grasp domain SRM_RS06610 6b1f8db6d36b6d544f53a41b76d537c6 746 Pfam PF02824 TGS domain 411 470 2.4E-21 T 22-04-2016 IPR004095 TGS KEGG: 00970+6.1.1.3 SRM_RS06610 6b1f8db6d36b6d544f53a41b76d537c6 746 Gene3D G3DSA:3.30.70.260 669 739 4.6E-15 T 22-04-2016 SRM_RS06610 6b1f8db6d36b6d544f53a41b76d537c6 746 TIGRFAM TIGR00691 spoT_relA: RelA/SpoT family protein 45 740 1.4E-207 T 22-04-2016 IPR004811 RelA/SpoT family GO:0015969 SRM_RS06610 6b1f8db6d36b6d544f53a41b76d537c6 746 SMART SM00954 254 369 1.2E-61 T 22-04-2016 IPR007685 RelA/SpoT GO:0015969 SRM_RS06610 6b1f8db6d36b6d544f53a41b76d537c6 746 SUPERFAMILY SSF81271 399 470 3.71E-21 T 22-04-2016 IPR012676 TGS-like KEGG: 00970+6.1.1.3 SRM_RS06610 6b1f8db6d36b6d544f53a41b76d537c6 746 PANTHER PTHR21262 8 746 1.3E-295 T 22-04-2016 SRM_RS06610 6b1f8db6d36b6d544f53a41b76d537c6 746 SUPERFAMILY SSF55021 669 744 1.04E-10 T 22-04-2016 SRM_RS06610 6b1f8db6d36b6d544f53a41b76d537c6 746 SMART SM00471 60 172 1.8E-8 T 22-04-2016 IPR003607 HD/PDEase domain SRM_RS15050 1e27957471f48d80e1f9843da526a725 494 Gene3D G3DSA:3.40.50.1820 169 491 5.4E-73 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold SRM_RS15050 1e27957471f48d80e1f9843da526a725 494 PANTHER PTHR12277 395 428 5.4E-21 T 22-04-2016 SRM_RS15050 1e27957471f48d80e1f9843da526a725 494 PANTHER PTHR12277 161 327 5.4E-21 T 22-04-2016 SRM_RS15050 1e27957471f48d80e1f9843da526a725 494 ProSitePatterns PS00708 Prolyl endopeptidase family serine active site. 265 295 - T 22-04-2016 IPR002471 Peptidase S9, serine active site GO:0004252|GO:0006508 SRM_RS15050 1e27957471f48d80e1f9843da526a725 494 SUPERFAMILY SSF53474 376 488 1.97E-48 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold SRM_RS15050 1e27957471f48d80e1f9843da526a725 494 SUPERFAMILY SSF53474 148 316 1.97E-48 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold SRM_RS15050 1e27957471f48d80e1f9843da526a725 494 Pfam PF12146 Serine aminopeptidase, S33 225 456 1.7E-14 T 22-04-2016 IPR022742 Serine aminopeptidase, S33 SRM_RS12405 e1f3657119185949acc48be67476e9bd 368 Pfam PF13519 von Willebrand factor type A domain 180 278 4.7E-6 T 22-04-2016 IPR002035 von Willebrand factor, type A SRM_RS12405 e1f3657119185949acc48be67476e9bd 368 SUPERFAMILY SSF53300 179 351 1.25E-17 T 22-04-2016 IPR002035 von Willebrand factor, type A SRM_RS12405 e1f3657119185949acc48be67476e9bd 368 Gene3D G3DSA:3.40.50.410 234 346 1.4E-7 T 22-04-2016 IPR002035 von Willebrand factor, type A SRM_RS04625 d7147ad1aee54f18cdaa0aab97eda7e7 316 Pfam PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain 147 309 3.8E-27 T 22-04-2016 IPR022383 Lactate/malate dehydrogenase, C-terminal GO:0016616|GO:0055114 SRM_RS04625 d7147ad1aee54f18cdaa0aab97eda7e7 316 SUPERFAMILY SSF56327 145 310 5.16E-53 T 22-04-2016 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal GO:0003824|GO:0005975|GO:0016616|GO:0055114 SRM_RS04625 d7147ad1aee54f18cdaa0aab97eda7e7 316 ProSitePatterns PS00064 L-lactate dehydrogenase active site. 174 180 - T 22-04-2016 IPR018177 L-lactate dehydrogenase, active site GO:0004459|GO:0055114 KEGG: 00010+1.1.1.27|KEGG: 00270+1.1.1.27|KEGG: 00620+1.1.1.27|KEGG: 00640+1.1.1.27|MetaCyc: PWY-5481|MetaCyc: PWY-6901|UniPathway: UPA00554 SRM_RS04625 d7147ad1aee54f18cdaa0aab97eda7e7 316 Hamap MF_00488 L-lactate dehydrogenase [ldh]. 4 313 38.025 T 22-04-2016 IPR011304 L-lactate dehydrogenase GO:0004459|GO:0005737|GO:0055114 KEGG: 00010+1.1.1.27|KEGG: 00270+1.1.1.27|KEGG: 00620+1.1.1.27|KEGG: 00640+1.1.1.27|MetaCyc: PWY-5481|MetaCyc: PWY-6901|UniPathway: UPA00554 SRM_RS04625 d7147ad1aee54f18cdaa0aab97eda7e7 316 Gene3D G3DSA:3.40.50.720 5 147 2.3E-45 T 22-04-2016 IPR016040 NAD(P)-binding domain SRM_RS04625 d7147ad1aee54f18cdaa0aab97eda7e7 316 Gene3D G3DSA:3.90.110.10 148 312 1.0E-56 T 22-04-2016 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal GO:0003824|GO:0005975|GO:0016616|GO:0055114 SRM_RS04625 d7147ad1aee54f18cdaa0aab97eda7e7 316 Pfam PF00056 lactate/malate dehydrogenase, NAD binding domain 7 144 4.3E-34 T 22-04-2016 IPR001236 Lactate/malate dehydrogenase, N-terminal GO:0016491|GO:0055114 SRM_RS04625 d7147ad1aee54f18cdaa0aab97eda7e7 316 PANTHER PTHR11540 3 312 1.0E-123 T 22-04-2016 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 SRM_RS04625 d7147ad1aee54f18cdaa0aab97eda7e7 316 SUPERFAMILY SSF51735 3 144 1.17E-40 T 22-04-2016 IPR016040 NAD(P)-binding domain SRM_RS04625 d7147ad1aee54f18cdaa0aab97eda7e7 316 PRINTS PR00086 L-lactate dehydrogenase signature 6 30 7.8E-39 T 22-04-2016 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 SRM_RS04625 d7147ad1aee54f18cdaa0aab97eda7e7 316 PRINTS PR00086 L-lactate dehydrogenase signature 118 138 7.8E-39 T 22-04-2016 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 SRM_RS04625 d7147ad1aee54f18cdaa0aab97eda7e7 316 PRINTS PR00086 L-lactate dehydrogenase signature 172 185 7.8E-39 T 22-04-2016 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 SRM_RS04625 d7147ad1aee54f18cdaa0aab97eda7e7 316 PRINTS PR00086 L-lactate dehydrogenase signature 142 160 7.8E-39 T 22-04-2016 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 SRM_RS04625 d7147ad1aee54f18cdaa0aab97eda7e7 316 PRINTS PR00086 L-lactate dehydrogenase signature 31 55 7.8E-39 T 22-04-2016 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 SRM_RS04625 d7147ad1aee54f18cdaa0aab97eda7e7 316 PANTHER PTHR11540:SF3 3 312 1.0E-123 T 22-04-2016 SRM_RS04625 d7147ad1aee54f18cdaa0aab97eda7e7 316 PIRSF PIRSF000102 1 314 5.0E-95 T 22-04-2016 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 SRM_RS04625 d7147ad1aee54f18cdaa0aab97eda7e7 316 TIGRFAM TIGR01771 L-LDH-NAD: L-lactate dehydrogenase 9 306 2.8E-105 T 22-04-2016 IPR011304 L-lactate dehydrogenase GO:0004459|GO:0005737|GO:0055114 KEGG: 00010+1.1.1.27|KEGG: 00270+1.1.1.27|KEGG: 00620+1.1.1.27|KEGG: 00640+1.1.1.27|MetaCyc: PWY-5481|MetaCyc: PWY-6901|UniPathway: UPA00554 SRM_RS03635 e2f23cd40862dee5461e35833621304b 496 Gene3D G3DSA:3.40.50.150 1 140 3.7E-22 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SRM_RS03635 e2f23cd40862dee5461e35833621304b 496 PANTHER PTHR10108:SF739 1 109 1.5E-12 T 22-04-2016 SRM_RS03635 e2f23cd40862dee5461e35833621304b 496 PANTHER PTHR10108 1 109 1.5E-12 T 22-04-2016 SRM_RS03635 e2f23cd40862dee5461e35833621304b 496 SUPERFAMILY SSF53335 1 122 6.88E-24 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SRM_RS03635 e2f23cd40862dee5461e35833621304b 496 PANTHER PTHR10108 351 395 1.5E-12 T 22-04-2016 SRM_RS03635 e2f23cd40862dee5461e35833621304b 496 Pfam PF13395 HNH endonuclease 409 446 3.8E-5 T 22-04-2016 IPR003615 HNH nuclease SRM_RS03635 e2f23cd40862dee5461e35833621304b 496 PANTHER PTHR10108:SF739 351 395 1.5E-12 T 22-04-2016 SRM_RS03635 e2f23cd40862dee5461e35833621304b 496 Pfam PF13649 Methyltransferase domain 1 96 1.3E-13 T 22-04-2016 SRM_RS05080 27d0399611707013d1e8497df340b3ab 394 PANTHER PTHR13096 9 246 1.8E-39 T 22-04-2016 SRM_RS05080 27d0399611707013d1e8497df340b3ab 394 Pfam PF08007 Cupin superfamily protein 16 316 3.8E-94 T 22-04-2016 IPR003347 JmjC domain SRM_RS05080 27d0399611707013d1e8497df340b3ab 394 SMART SM00558 103 232 5.0E-4 T 22-04-2016 IPR003347 JmjC domain SRM_RS05080 27d0399611707013d1e8497df340b3ab 394 Gene3D G3DSA:2.60.120.650 13 218 2.6E-38 T 22-04-2016 SRM_RS05080 27d0399611707013d1e8497df340b3ab 394 SUPERFAMILY SSF51197 10 304 3.71E-73 T 22-04-2016 SRM_RS11515 8f78081d40cb0e5df2638283af132b96 246 PANTHER PTHR10286 67 241 4.3E-22 T 22-04-2016 IPR008162 Inorganic pyrophosphatase GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1|Reactome: REACT_21259|Reactome: REACT_71 SRM_RS11515 8f78081d40cb0e5df2638283af132b96 246 Pfam PF00719 Inorganic pyrophosphatase 81 240 8.8E-34 T 22-04-2016 IPR008162 Inorganic pyrophosphatase GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1|Reactome: REACT_21259|Reactome: REACT_71 SRM_RS11515 8f78081d40cb0e5df2638283af132b96 246 PANTHER PTHR10286:SF0 67 241 4.3E-22 T 22-04-2016 SRM_RS11515 8f78081d40cb0e5df2638283af132b96 246 SUPERFAMILY SSF50324 75 241 1.83E-40 T 22-04-2016 IPR008162 Inorganic pyrophosphatase GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1|Reactome: REACT_21259|Reactome: REACT_71 SRM_RS11515 8f78081d40cb0e5df2638283af132b96 246 ProSitePatterns PS00387 Inorganic pyrophosphatase signature. 138 144 - T 22-04-2016 IPR008162 Inorganic pyrophosphatase GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1|Reactome: REACT_21259|Reactome: REACT_71 SRM_RS11515 8f78081d40cb0e5df2638283af132b96 246 Gene3D G3DSA:3.90.80.10 75 241 1.2E-36 T 22-04-2016 IPR008162 Inorganic pyrophosphatase GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1|Reactome: REACT_21259|Reactome: REACT_71 SRM_RS15580 b1ba8250eccc7631af9a59be566bd06a 369 Gene3D G3DSA:2.40.50.100 180 216 1.9E-7 T 22-04-2016 SRM_RS15580 b1ba8250eccc7631af9a59be566bd06a 369 Gene3D G3DSA:2.40.50.100 80 113 1.9E-7 T 22-04-2016 SRM_RS15580 b1ba8250eccc7631af9a59be566bd06a 369 SUPERFAMILY SSF111369 68 295 4.71E-18 T 22-04-2016 SRM_RS15580 b1ba8250eccc7631af9a59be566bd06a 369 PANTHER PTHR30097 43 369 1.1E-57 T 22-04-2016 SRM_RS15580 b1ba8250eccc7631af9a59be566bd06a 369 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 65 290 1.4E-47 T 22-04-2016 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain SRM_RS15580 b1ba8250eccc7631af9a59be566bd06a 369 PANTHER PTHR30097:SF4 43 369 1.1E-57 T 22-04-2016 SRM_RS15580 b1ba8250eccc7631af9a59be566bd06a 369 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 55 361 9.2E-37 T 22-04-2016 IPR006143 RND efflux pump, membrane fusion protein GO:0016020|GO:0055085 SRM_RS12260 8060f1e4e0ea2069740e7c70f3f7fdbd 902 PANTHER PTHR12815:SF13 730 757 1.6E-19 T 22-04-2016 SRM_RS12260 8060f1e4e0ea2069740e7c70f3f7fdbd 902 PANTHER PTHR12815:SF13 847 869 1.6E-19 T 22-04-2016 SRM_RS12260 8060f1e4e0ea2069740e7c70f3f7fdbd 902 PANTHER PTHR12815:SF13 773 818 1.6E-19 T 22-04-2016 SRM_RS12260 8060f1e4e0ea2069740e7c70f3f7fdbd 902 Gene3D G3DSA:2.40.160.50 691 901 1.4E-11 T 22-04-2016 SRM_RS12260 8060f1e4e0ea2069740e7c70f3f7fdbd 902 PANTHER PTHR12815 730 757 1.6E-19 T 22-04-2016 SRM_RS12260 8060f1e4e0ea2069740e7c70f3f7fdbd 902 PANTHER PTHR12815 847 869 1.6E-19 T 22-04-2016 SRM_RS12260 8060f1e4e0ea2069740e7c70f3f7fdbd 902 PANTHER PTHR12815 773 818 1.6E-19 T 22-04-2016 SRM_RS12260 8060f1e4e0ea2069740e7c70f3f7fdbd 902 Pfam PF01103 Surface antigen 473 902 1.2E-27 T 22-04-2016 IPR000184 Bacterial surface antigen (D15) GO:0019867 SRM_RS12260 8060f1e4e0ea2069740e7c70f3f7fdbd 902 Pfam PF07244 Surface antigen variable number repeat 100 216 1.3E-6 T 22-04-2016 IPR010827 Surface antigen variable number GO:0019867 SRM_RS04830 447629f2e53f84243c29b4c1cae4aecf 417 SUPERFAMILY SSF51905 1 285 6.04E-54 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SRM_RS04830 447629f2e53f84243c29b4c1cae4aecf 417 SUPERFAMILY SSF51905 369 413 6.04E-54 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SRM_RS04830 447629f2e53f84243c29b4c1cae4aecf 417 PANTHER PTHR10742:SF287 4 414 6.8E-73 T 22-04-2016 SRM_RS04830 447629f2e53f84243c29b4c1cae4aecf 417 PANTHER PTHR10742 4 414 6.8E-73 T 22-04-2016 SRM_RS04830 447629f2e53f84243c29b4c1cae4aecf 417 Pfam PF01593 Flavin containing amine oxidoreductase 13 411 3.5E-42 T 22-04-2016 IPR002937 Amine oxidase GO:0016491|GO:0055114 SRM_RS04830 447629f2e53f84243c29b4c1cae4aecf 417 Gene3D G3DSA:3.50.50.60 182 311 8.9E-34 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SRM_RS04830 447629f2e53f84243c29b4c1cae4aecf 417 Gene3D G3DSA:3.50.50.60 3 90 8.9E-34 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SRM_RS04235 6017588572628ebdb38a7350d24f00f6 77 Pfam PF10047 Protein of unknown function (DUF2281) 7 44 4.1E-8 T 22-04-2016 IPR018739 Domain of unknown function DUF2281 SRM_RS00985 a5ad143796231b9e95294ff0ab164fea 410 Pfam PF02073 Thermophilic metalloprotease (M29) 57 390 1.1E-64 T 22-04-2016 IPR000787 Peptidase M29, aminopeptidase II GO:0004177|GO:0006508 SRM_RS00985 a5ad143796231b9e95294ff0ab164fea 410 SUPERFAMILY SSF144052 56 409 7.85E-100 T 22-04-2016 SRM_RS00985 a5ad143796231b9e95294ff0ab164fea 410 PRINTS PR00919 Thermophilic metalloprotease (M29) signature 317 337 2.3E-11 T 22-04-2016 IPR000787 Peptidase M29, aminopeptidase II GO:0004177|GO:0006508 SRM_RS00985 a5ad143796231b9e95294ff0ab164fea 410 PRINTS PR00919 Thermophilic metalloprotease (M29) signature 261 280 2.3E-11 T 22-04-2016 IPR000787 Peptidase M29, aminopeptidase II GO:0004177|GO:0006508 SRM_RS00985 a5ad143796231b9e95294ff0ab164fea 410 PANTHER PTHR34448:SF2 52 409 2.4E-141 T 22-04-2016 SRM_RS00985 a5ad143796231b9e95294ff0ab164fea 410 PANTHER PTHR34448 52 409 2.4E-141 T 22-04-2016 SRM_RS00825 28419b274183c8f8dc12f20d2b655363 419 Pfam PF02687 FtsX-like permease family 286 411 3.7E-20 T 22-04-2016 IPR003838 ABC transporter permease protein domain GO:0016020 SRM_RS00825 28419b274183c8f8dc12f20d2b655363 419 PANTHER PTHR30489 178 418 5.4E-55 T 22-04-2016 SRM_RS00825 28419b274183c8f8dc12f20d2b655363 419 PANTHER PTHR30489 3 159 5.4E-55 T 22-04-2016 SRM_RS00825 28419b274183c8f8dc12f20d2b655363 419 Pfam PF12704 MacB-like periplasmic core domain 25 253 1.3E-14 T 22-04-2016 IPR025857 MacB-like periplasmic core domain SRM_RS06105 798fbeb361b634ada0f3cf86789f91b0 88 Gene3D G3DSA:3.30.1390.10 4 78 6.7E-18 T 22-04-2016 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like SRM_RS06105 798fbeb361b634ada0f3cf86789f91b0 88 SUPERFAMILY SSF54736 11 86 2.82E-19 T 22-04-2016 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like SRM_RS06105 798fbeb361b634ada0f3cf86789f91b0 88 Pfam PF02617 ATP-dependent Clp protease adaptor protein ClpS 14 77 1.0E-18 T 22-04-2016 IPR003769 Adaptor protein ClpS, core GO:0030163 SRM_RS12465 6d984d5e8a6a5a6a078224122740c294 385 PANTHER PTHR10160:SF19 1 368 3.1E-142 T 22-04-2016 SRM_RS12465 6d984d5e8a6a5a6a078224122740c294 385 SMART SM01002 150 315 4.3E-75 T 22-04-2016 IPR007698 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, NAD(H)-binding domain SRM_RS12465 6d984d5e8a6a5a6a078224122740c294 385 Gene3D G3DSA:3.40.50.1770 199 368 4.1E-25 T 22-04-2016 SRM_RS12465 6d984d5e8a6a5a6a078224122740c294 385 PANTHER PTHR10160 1 368 3.1E-142 T 22-04-2016 SRM_RS12465 6d984d5e8a6a5a6a078224122740c294 385 Pfam PF01262 Alanine dehydrogenase/PNT, C-terminal domain 145 370 8.8E-64 T 22-04-2016 IPR007698 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, NAD(H)-binding domain SRM_RS12465 6d984d5e8a6a5a6a078224122740c294 385 Gene3D G3DSA:3.50.50.60 176 198 7.5E-6 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SRM_RS12465 6d984d5e8a6a5a6a078224122740c294 385 Gene3D G3DSA:3.40.50.1770 4 175 4.7E-54 T 22-04-2016 SRM_RS12465 6d984d5e8a6a5a6a078224122740c294 385 SMART SM01003 6 141 4.5E-58 T 22-04-2016 IPR007886 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, N-terminal SRM_RS12465 6d984d5e8a6a5a6a078224122740c294 385 SUPERFAMILY SSF52283 4 172 1.79E-43 T 22-04-2016 SRM_RS12465 6d984d5e8a6a5a6a078224122740c294 385 SUPERFAMILY SSF51735 142 320 2.25E-36 T 22-04-2016 IPR016040 NAD(P)-binding domain SRM_RS12465 6d984d5e8a6a5a6a078224122740c294 385 Pfam PF05222 Alanine dehydrogenase/PNT, N-terminal domain 6 140 4.6E-40 T 22-04-2016 IPR007886 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, N-terminal SRM_RS12465 6d984d5e8a6a5a6a078224122740c294 385 ProSitePatterns PS00837 Alanine dehydrogenase & pyridine nucleotide transhydrogenase signature 2. 174 199 - T 22-04-2016 IPR008143 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, conserved site-2 GO:0016491|GO:0055114 KEGG: 00250+1.4.1.1|KEGG: 00430+1.4.1.1|UniPathway: UPA00527 SRM_RS07885 f5409a099717bb5ffffb8178c7bde857 333 Pfam PF00459 Inositol monophosphatase family 9 328 5.3E-52 T 22-04-2016 IPR000760 Inositol monophosphatase GO:0046854 SRM_RS07885 f5409a099717bb5ffffb8178c7bde857 333 Gene3D G3DSA:3.40.190.80 211 330 4.5E-37 T 22-04-2016 SRM_RS07885 f5409a099717bb5ffffb8178c7bde857 333 PANTHER PTHR20854 1 331 3.6E-122 T 22-04-2016 IPR000760 Inositol monophosphatase GO:0046854 SRM_RS07885 f5409a099717bb5ffffb8178c7bde857 333 Gene3D G3DSA:3.30.540.10 4 210 4.5E-52 T 22-04-2016 SRM_RS07885 f5409a099717bb5ffffb8178c7bde857 333 ProSitePatterns PS00629 Inositol monophosphatase family signature 1. 120 133 - T 22-04-2016 IPR020583 Inositol monophosphatase, metal-binding site SRM_RS07885 f5409a099717bb5ffffb8178c7bde857 333 TIGRFAM TIGR01330 bisphos_HAL2: 3'(2'),5'-bisphosphate nucleotidase 3 329 7.6E-97 T 22-04-2016 IPR006239 3(2),5 -bisphosphate nucleotidase HAL2 GO:0006790|GO:0008441 KEGG: 00920+3.1.3.7 SRM_RS07885 f5409a099717bb5ffffb8178c7bde857 333 PRINTS PR00377 Inositol monophosphatase superfamily signature 272 296 3.2E-8 T 22-04-2016 IPR000760 Inositol monophosphatase GO:0046854 SRM_RS07885 f5409a099717bb5ffffb8178c7bde857 333 PRINTS PR00377 Inositol monophosphatase superfamily signature 62 78 3.2E-8 T 22-04-2016 IPR000760 Inositol monophosphatase GO:0046854 SRM_RS07885 f5409a099717bb5ffffb8178c7bde857 333 PRINTS PR00377 Inositol monophosphatase superfamily signature 40 60 3.2E-8 T 22-04-2016 IPR000760 Inositol monophosphatase GO:0046854 SRM_RS07885 f5409a099717bb5ffffb8178c7bde857 333 PANTHER PTHR20854:SF34 1 331 3.6E-122 T 22-04-2016 SRM_RS07885 f5409a099717bb5ffffb8178c7bde857 333 SUPERFAMILY SSF56655 4 328 5.24E-73 T 22-04-2016 SRM_RS15110 0444d2ef48c529c2d86da3064dd6c4e7 113 Pfam PF00581 Rhodanese-like domain 9 103 3.7E-12 T 22-04-2016 IPR001763 Rhodanese-like domain SRM_RS15110 0444d2ef48c529c2d86da3064dd6c4e7 113 SMART SM00450 9 107 5.1E-13 T 22-04-2016 IPR001763 Rhodanese-like domain SRM_RS15110 0444d2ef48c529c2d86da3064dd6c4e7 113 SUPERFAMILY SSF52821 4 110 1.96E-26 T 22-04-2016 IPR001763 Rhodanese-like domain SRM_RS15110 0444d2ef48c529c2d86da3064dd6c4e7 113 Gene3D G3DSA:3.40.250.10 3 109 3.8E-23 T 22-04-2016 IPR001763 Rhodanese-like domain SRM_RS06015 74ba6bd97555ba91ce1b359a38d4fc67 267 PANTHER PTHR24319 1 262 1.3E-73 T 22-04-2016 SRM_RS06015 74ba6bd97555ba91ce1b359a38d4fc67 267 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 84 95 2.0E-27 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SRM_RS06015 74ba6bd97555ba91ce1b359a38d4fc67 267 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 161 180 2.0E-27 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SRM_RS06015 74ba6bd97555ba91ce1b359a38d4fc67 267 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 226 246 2.0E-27 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SRM_RS06015 74ba6bd97555ba91ce1b359a38d4fc67 267 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 182 199 2.0E-27 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SRM_RS06015 74ba6bd97555ba91ce1b359a38d4fc67 267 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 9 26 2.0E-27 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SRM_RS06015 74ba6bd97555ba91ce1b359a38d4fc67 267 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 135 151 2.0E-27 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SRM_RS06015 74ba6bd97555ba91ce1b359a38d4fc67 267 PANTHER PTHR24319:SF23 1 262 1.3E-73 T 22-04-2016 SRM_RS06015 74ba6bd97555ba91ce1b359a38d4fc67 267 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 14 261 9.9E-55 T 22-04-2016 SRM_RS06015 74ba6bd97555ba91ce1b359a38d4fc67 267 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 8 182 0.007 T 22-04-2016 SRM_RS06015 74ba6bd97555ba91ce1b359a38d4fc67 267 Gene3D G3DSA:3.40.50.720 4 263 3.1E-75 T 22-04-2016 IPR016040 NAD(P)-binding domain SRM_RS06015 74ba6bd97555ba91ce1b359a38d4fc67 267 SUPERFAMILY SSF51735 7 263 3.71E-71 T 22-04-2016 IPR016040 NAD(P)-binding domain SRM_RS04870 fc48a9a09b229847f381cb88d66c3624 199 Pfam PF02632 BioY family 52 189 1.3E-28 T 22-04-2016 IPR003784 BioY protein GO:0005886|GO:0015225|GO:0015878 SRM_RS04870 fc48a9a09b229847f381cb88d66c3624 199 PIRSF PIRSF016661 12 197 3.8E-30 T 22-04-2016 IPR003784 BioY protein GO:0005886|GO:0015225|GO:0015878 SRM_RS10120 5f9e56df88babce0d91d297345135ad8 462 Gene3D G3DSA:3.40.50.620 22 135 2.0E-12 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold SRM_RS10120 5f9e56df88babce0d91d297345135ad8 462 Gene3D G3DSA:1.10.579.10 297 458 2.4E-20 T 22-04-2016 SRM_RS10120 5f9e56df88babce0d91d297345135ad8 462 Pfam PF00875 DNA photolyase 23 182 3.1E-26 T 22-04-2016 IPR006050 DNA photolyase, N-terminal SRM_RS10120 5f9e56df88babce0d91d297345135ad8 462 Pfam PF03441 FAD binding domain of DNA photolyase 291 415 7.4E-6 T 22-04-2016 IPR005101 Cryptochrome/DNA photolyase, FAD-binding domain SRM_RS10120 5f9e56df88babce0d91d297345135ad8 462 SUPERFAMILY SSF52425 22 188 5.1E-34 T 22-04-2016 IPR006050 DNA photolyase, N-terminal SRM_RS10120 5f9e56df88babce0d91d297345135ad8 462 PANTHER PTHR10211:SF0 5 460 2.3E-142 T 22-04-2016 IPR008148 DNA photolyase class 2 GO:0003904|GO:0006281 SRM_RS10120 5f9e56df88babce0d91d297345135ad8 462 Gene3D G3DSA:1.25.40.80 220 296 8.0E-24 T 22-04-2016 SRM_RS10120 5f9e56df88babce0d91d297345135ad8 462 Gene3D G3DSA:1.25.40.80 170 187 8.0E-24 T 22-04-2016 SRM_RS10120 5f9e56df88babce0d91d297345135ad8 462 SUPERFAMILY SSF48173 218 451 3.79E-55 T 22-04-2016 IPR005101 Cryptochrome/DNA photolyase, FAD-binding domain SRM_RS10120 5f9e56df88babce0d91d297345135ad8 462 PANTHER PTHR10211 5 460 2.3E-142 T 22-04-2016 SRM_RS02405 485755cda32bcc2c20dc75d789ba3d22 607 Gene3D G3DSA:1.10.150.80 537 605 3.0E-23 T 22-04-2016 IPR002121 HRDC domain GO:0003676|GO:0005622 SRM_RS02405 485755cda32bcc2c20dc75d789ba3d22 607 SUPERFAMILY SSF52540 203 454 1.59E-61 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SRM_RS02405 485755cda32bcc2c20dc75d789ba3d22 607 Gene3D G3DSA:3.40.50.300 10 194 2.9E-53 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SRM_RS02405 485755cda32bcc2c20dc75d789ba3d22 607 SUPERFAMILY SSF47819 536 606 1.38E-23 T 22-04-2016 IPR010997 HRDC-like GO:0000166|GO:0003824|GO:0044237 SRM_RS02405 485755cda32bcc2c20dc75d789ba3d22 607 Pfam PF00271 Helicase conserved C-terminal domain 222 328 8.4E-14 T 22-04-2016 IPR001650 Helicase, C-terminal SRM_RS02405 485755cda32bcc2c20dc75d789ba3d22 607 PANTHER PTHR13710:SF81 10 606 2.1E-272 T 22-04-2016 SRM_RS02405 485755cda32bcc2c20dc75d789ba3d22 607 TIGRFAM TIGR00614 recQ_fam: ATP-dependent DNA helicase, RecQ family 11 462 2.8E-151 T 22-04-2016 IPR004589 DNA helicase, ATP-dependent, RecQ type GO:0006310|GO:0008026 SRM_RS02405 485755cda32bcc2c20dc75d789ba3d22 607 SMART SM00956 410 513 1.6E-49 T 22-04-2016 IPR018982 RQC domain GO:0006260|GO:0006281|GO:0043140 SRM_RS02405 485755cda32bcc2c20dc75d789ba3d22 607 SMART SM00490 247 328 1.9E-23 T 22-04-2016 IPR001650 Helicase, C-terminal SRM_RS02405 485755cda32bcc2c20dc75d789ba3d22 607 TIGRFAM TIGR01389 recQ: ATP-dependent DNA helicase RecQ 10 606 1.4E-232 T 22-04-2016 IPR006293 DNA helicase, ATP-dependent, RecQ type, bacterial GO:0004003|GO:0006310|GO:0009432 SRM_RS02405 485755cda32bcc2c20dc75d789ba3d22 607 SMART SM00487 17 213 6.5E-29 T 22-04-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain SRM_RS02405 485755cda32bcc2c20dc75d789ba3d22 607 Pfam PF00570 HRDC domain 537 603 4.3E-24 T 22-04-2016 IPR002121 HRDC domain GO:0003676|GO:0005622 SRM_RS02405 485755cda32bcc2c20dc75d789ba3d22 607 Pfam PF16124 RecQ zinc-binding 340 403 1.3E-19 T 22-04-2016 IPR032284 ATP-dependent DNA helicase RecQ, zinc-binding domain SRM_RS02405 485755cda32bcc2c20dc75d789ba3d22 607 SMART SM00341 533 607 6.5E-14 T 22-04-2016 IPR002121 HRDC domain GO:0003676|GO:0005622 SRM_RS02405 485755cda32bcc2c20dc75d789ba3d22 607 Gene3D G3DSA:1.10.10.10 342 511 3.9E-61 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SRM_RS02405 485755cda32bcc2c20dc75d789ba3d22 607 Gene3D G3DSA:3.40.50.300 202 341 6.8E-46 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SRM_RS02405 485755cda32bcc2c20dc75d789ba3d22 607 Pfam PF09382 RQC domain 405 511 1.6E-39 T 22-04-2016 IPR018982 RQC domain GO:0006260|GO:0006281|GO:0043140 SRM_RS02405 485755cda32bcc2c20dc75d789ba3d22 607 Pfam PF00270 DEAD/DEAH box helicase 23 181 4.5E-17 T 22-04-2016 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 SRM_RS02405 485755cda32bcc2c20dc75d789ba3d22 607 PANTHER PTHR13710 10 606 2.1E-272 T 22-04-2016 SRM_RS02405 485755cda32bcc2c20dc75d789ba3d22 607 SUPERFAMILY SSF52540 10 192 1.48E-42 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SRM_RS08995 75ac5a755b062cfacfa45270bf41476d 701 PIRSF PIRSF006402 1 700 4.4E-247 T 22-04-2016 IPR024705 Spermatogenesis-associated protein 20 SRM_RS08995 75ac5a755b062cfacfa45270bf41476d 701 Pfam PF03190 Protein of unknown function, DUF255 3 165 3.8E-75 T 22-04-2016 IPR004879 Domain of unknown function DUF255 SRM_RS08995 75ac5a755b062cfacfa45270bf41476d 701 Gene3D G3DSA:3.40.30.10 20 131 2.7E-33 T 22-04-2016 IPR012336 Thioredoxin-like fold SRM_RS08995 75ac5a755b062cfacfa45270bf41476d 701 PANTHER PTHR12145 2 696 1.1E-299 T 22-04-2016 SRM_RS08995 75ac5a755b062cfacfa45270bf41476d 701 SUPERFAMILY SSF48208 353 554 8.4E-81 T 22-04-2016 IPR008928 Six-hairpin glycosidase-like GO:0003824 SRM_RS08995 75ac5a755b062cfacfa45270bf41476d 701 SUPERFAMILY SSF48208 188 321 8.4E-81 T 22-04-2016 IPR008928 Six-hairpin glycosidase-like GO:0003824 SRM_RS08995 75ac5a755b062cfacfa45270bf41476d 701 SUPERFAMILY SSF52833 1 129 2.54E-32 T 22-04-2016 IPR012336 Thioredoxin-like fold SRM_RS08995 75ac5a755b062cfacfa45270bf41476d 701 Gene3D G3DSA:1.50.10.10 373 547 1.4E-29 T 22-04-2016 IPR012341 Six-hairpin glycosidase GO:0003824 SRM_RS08995 75ac5a755b062cfacfa45270bf41476d 701 Gene3D G3DSA:1.50.10.10 190 324 1.4E-29 T 22-04-2016 IPR012341 Six-hairpin glycosidase GO:0003824 SRM_RS08995 75ac5a755b062cfacfa45270bf41476d 701 PANTHER PTHR12145:SF11 2 696 1.1E-299 T 22-04-2016 SRM_RS03795 6a0c89566ce08b33159c7a4a337be32e 356 Pfam PF01050 Mannose-6-phosphate isomerase 315 353 5.7E-6 T 22-04-2016 IPR001538 Mannose-6-phosphate isomerase, type II, C-terminal GO:0005976|GO:0016779 KEGG: 00051+2.7.7.13|KEGG: 00520+2.7.7.13|MetaCyc: PWY-5659|MetaCyc: PWY-882|UniPathway: UPA00126 SRM_RS03795 6a0c89566ce08b33159c7a4a337be32e 356 Gene3D G3DSA:3.90.550.10 3 271 8.5E-88 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases SRM_RS03795 6a0c89566ce08b33159c7a4a337be32e 356 Pfam PF00483 Nucleotidyl transferase 4 286 2.7E-49 T 22-04-2016 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 Reactome: REACT_17015 SRM_RS03795 6a0c89566ce08b33159c7a4a337be32e 356 SUPERFAMILY SSF159283 283 347 1.16E-20 T 22-04-2016 SRM_RS03795 6a0c89566ce08b33159c7a4a337be32e 356 PANTHER PTHR12526 152 289 1.7E-38 T 22-04-2016 SRM_RS03795 6a0c89566ce08b33159c7a4a337be32e 356 SUPERFAMILY SSF53448 1 281 2.93E-67 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases SRM_RS10820 390d4df365ae5d19eaf90195f9e42bd7 187 SUPERFAMILY SSF52309 76 151 3.97E-5 T 22-04-2016 SRM_RS10820 390d4df365ae5d19eaf90195f9e42bd7 187 Gene3D G3DSA:3.40.50.1810 97 150 9.2E-5 T 22-04-2016 IPR007710 Nucleoside 2-deoxyribosyltransferase GO:0009159|GO:0050144|GO:0070694 SRM_RS14710 9a7d12f5ec19ca86d9d33c4170b574d4 147 Pfam PF09722 Protein of unknown function (DUF2384) 95 144 4.6E-15 T 22-04-2016 IPR024467 Domain of unknown function DUF2384 SRM_RS14710 9a7d12f5ec19ca86d9d33c4170b574d4 147 TIGRFAM TIGR02293 TAS_TIGR02293: putative toxin-antitoxin system antitoxin component, TIGR02293 family 31 145 1.1E-22 T 22-04-2016 IPR011979 Conserved hypothetical protein CHP02293 SRM_RS02090 084c719570d4b3a4d01d8e784d3900c8 92 PANTHER PTHR33293 8 85 1.2E-13 T 22-04-2016 SRM_RS02090 084c719570d4b3a4d01d8e784d3900c8 92 Gene3D G3DSA:1.10.10.60 48 89 1.1E-7 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 SRM_RS02090 084c719570d4b3a4d01d8e784d3900c8 92 Pfam PF13384 Homeodomain-like domain 48 85 4.4E-9 T 22-04-2016 SRM_RS02090 084c719570d4b3a4d01d8e784d3900c8 92 SUPERFAMILY SSF46689 44 87 5.02E-8 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 SRM_RS11795 fe1750e368ddbcf5ab1e7ec4c63ba17b 124 PANTHER PTHR11715 1 122 3.3E-59 T 22-04-2016 IPR002930 Glycine cleavage system H-protein SRM_RS11795 fe1750e368ddbcf5ab1e7ec4c63ba17b 124 ProSitePatterns PS00189 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 47 76 - T 22-04-2016 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site SRM_RS11795 fe1750e368ddbcf5ab1e7ec4c63ba17b 124 Pfam PF01597 Glycine cleavage H-protein 7 123 3.0E-44 T 22-04-2016 IPR002930 Glycine cleavage system H-protein SRM_RS11795 fe1750e368ddbcf5ab1e7ec4c63ba17b 124 SUPERFAMILY SSF51230 4 123 4.35E-43 T 22-04-2016 IPR011053 Single hybrid motif SRM_RS11795 fe1750e368ddbcf5ab1e7ec4c63ba17b 124 Hamap MF_00272 Glycine cleavage system H protein [gcvH]. 4 116 26.87 T 22-04-2016 IPR002930 Glycine cleavage system H-protein SRM_RS11795 fe1750e368ddbcf5ab1e7ec4c63ba17b 124 Gene3D G3DSA:2.40.50.100 6 123 6.5E-47 T 22-04-2016 SRM_RS11795 fe1750e368ddbcf5ab1e7ec4c63ba17b 124 TIGRFAM TIGR00527 gcvH: glycine cleavage system H protein 3 123 8.0E-48 T 22-04-2016 IPR017453 Glycine cleavage system H-protein, subgroup GO:0005960|GO:0019464 SRM_RS08630 425d4f3eebcbbc397c786a569b247b0f 658 PANTHER PTHR11670:SF30 1 657 6.4E-230 T 22-04-2016 SRM_RS08630 425d4f3eebcbbc397c786a569b247b0f 658 Pfam PF00694 Aconitase C-terminal domain 517 587 1.2E-22 T 22-04-2016 IPR000573 Aconitase A/isopropylmalate dehydratase small subunit, swivel domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 SRM_RS08630 425d4f3eebcbbc397c786a569b247b0f 658 Gene3D G3DSA:3.30.499.10 27 157 6.4E-43 T 22-04-2016 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 SRM_RS08630 425d4f3eebcbbc397c786a569b247b0f 658 SUPERFAMILY SSF52016 449 652 3.34E-50 T 22-04-2016 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel SRM_RS08630 425d4f3eebcbbc397c786a569b247b0f 658 Gene3D G3DSA:3.40.1060.10 161 265 5.2E-34 T 22-04-2016 IPR015932 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 2 GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 SRM_RS08630 425d4f3eebcbbc397c786a569b247b0f 658 PRINTS PR00415 Aconitase family signature 127 142 1.4E-20 T 22-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 SRM_RS08630 425d4f3eebcbbc397c786a569b247b0f 658 PRINTS PR00415 Aconitase family signature 189 202 1.4E-20 T 22-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 SRM_RS08630 425d4f3eebcbbc397c786a569b247b0f 658 PRINTS PR00415 Aconitase family signature 113 126 1.4E-20 T 22-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 SRM_RS08630 425d4f3eebcbbc397c786a569b247b0f 658 PRINTS PR00415 Aconitase family signature 203 216 1.4E-20 T 22-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 SRM_RS08630 425d4f3eebcbbc397c786a569b247b0f 658 PRINTS PR00415 Aconitase family signature 352 365 1.4E-20 T 22-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 SRM_RS08630 425d4f3eebcbbc397c786a569b247b0f 658 PANTHER PTHR11670 1 657 6.4E-230 T 22-04-2016 IPR015937 Aconitase/isopropylmalate dehydratase GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 SRM_RS08630 425d4f3eebcbbc397c786a569b247b0f 658 TIGRFAM TIGR01342 acon_putative: putative aconitate hydratase 5 652 2.9E-256 T 22-04-2016 IPR006250 Aconitase, putative SRM_RS08630 425d4f3eebcbbc397c786a569b247b0f 658 Gene3D G3DSA:3.20.19.10 469 652 2.3E-46 T 22-04-2016 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel SRM_RS08630 425d4f3eebcbbc397c786a569b247b0f 658 SUPERFAMILY SSF53732 1 421 6.67E-134 T 22-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 SRM_RS08630 425d4f3eebcbbc397c786a569b247b0f 658 Pfam PF00330 Aconitase family (aconitate hydratase) 8 410 3.3E-96 T 22-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 SRM_RS08630 425d4f3eebcbbc397c786a569b247b0f 658 Gene3D G3DSA:3.30.499.10 273 468 2.7E-50 T 22-04-2016 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 SRM_RS07535 680060428696a6d0a559adf88ae1af16 518 Gene3D G3DSA:1.20.1340.10 49 128 5.5E-12 T 22-04-2016 SRM_RS07535 680060428696a6d0a559adf88ae1af16 518 Gene3D G3DSA:3.90.1150.10 395 510 2.9E-35 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 SRM_RS07535 680060428696a6d0a559adf88ae1af16 518 PRINTS PR00800 Aromatic-L-amino-acid decarboxylase signature 141 159 1.6E-21 T 22-04-2016 IPR010977 Aromatic-L-amino-acid decarboxylase GO:0006520|GO:0016831 SRM_RS07535 680060428696a6d0a559adf88ae1af16 518 PRINTS PR00800 Aromatic-L-amino-acid decarboxylase signature 94 113 1.6E-21 T 22-04-2016 IPR010977 Aromatic-L-amino-acid decarboxylase GO:0006520|GO:0016831 SRM_RS07535 680060428696a6d0a559adf88ae1af16 518 PRINTS PR00800 Aromatic-L-amino-acid decarboxylase signature 381 396 1.6E-21 T 22-04-2016 IPR010977 Aromatic-L-amino-acid decarboxylase GO:0006520|GO:0016831 SRM_RS07535 680060428696a6d0a559adf88ae1af16 518 PRINTS PR00800 Aromatic-L-amino-acid decarboxylase signature 160 179 1.6E-21 T 22-04-2016 IPR010977 Aromatic-L-amino-acid decarboxylase GO:0006520|GO:0016831 SRM_RS07535 680060428696a6d0a559adf88ae1af16 518 PRINTS PR00800 Aromatic-L-amino-acid decarboxylase signature 120 139 1.6E-21 T 22-04-2016 IPR010977 Aromatic-L-amino-acid decarboxylase GO:0006520|GO:0016831 SRM_RS07535 680060428696a6d0a559adf88ae1af16 518 PRINTS PR00800 Aromatic-L-amino-acid decarboxylase signature 424 443 1.6E-21 T 22-04-2016 IPR010977 Aromatic-L-amino-acid decarboxylase GO:0006520|GO:0016831 SRM_RS07535 680060428696a6d0a559adf88ae1af16 518 PRINTS PR00800 Aromatic-L-amino-acid decarboxylase signature 53 72 1.6E-21 T 22-04-2016 IPR010977 Aromatic-L-amino-acid decarboxylase GO:0006520|GO:0016831 SRM_RS07535 680060428696a6d0a559adf88ae1af16 518 Pfam PF00282 Pyridoxal-dependent decarboxylase conserved domain 87 442 7.4E-69 T 22-04-2016 IPR002129 Pyridoxal phosphate-dependent decarboxylase GO:0016831|GO:0019752|GO:0030170 SRM_RS07535 680060428696a6d0a559adf88ae1af16 518 SUPERFAMILY SSF53383 49 506 1.36E-133 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase SRM_RS07535 680060428696a6d0a559adf88ae1af16 518 PANTHER PTHR11999 47 511 1.4E-122 T 22-04-2016 SRM_RS07535 680060428696a6d0a559adf88ae1af16 518 Gene3D G3DSA:3.40.640.10 131 394 1.4E-95 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 SRM_RS05330 2bdb444a726e3c08fecf774a7a4bcf49 207 Pfam PF13505 Outer membrane protein beta-barrel domain 7 207 2.2E-9 T 22-04-2016 IPR027385 Outer membrane protein beta-barrel SRM_RS05330 2bdb444a726e3c08fecf774a7a4bcf49 207 Gene3D G3DSA:2.40.160.20 26 207 3.4E-11 T 22-04-2016 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 SRM_RS05330 2bdb444a726e3c08fecf774a7a4bcf49 207 SUPERFAMILY SSF56925 25 207 1.54E-11 T 22-04-2016 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 SRM_RS07375 75cbf54fdb848cc8227d73e6c229af1b 305 TIGRFAM TIGR00126 deoC: deoxyribose-phosphate aldolase 46 267 1.4E-48 T 22-04-2016 IPR011343 Deoxyribose-phosphate aldolase GO:0004139|GO:0005737|GO:0009264 KEGG: 00030+4.1.2.4|MetaCyc: PWY-7180|UniPathway: UPA00002 SRM_RS07375 75cbf54fdb848cc8227d73e6c229af1b 305 PIRSF PIRSF001357 39 295 3.8E-75 T 22-04-2016 IPR011343 Deoxyribose-phosphate aldolase GO:0004139|GO:0005737|GO:0009264 KEGG: 00030+4.1.2.4|MetaCyc: PWY-7180|UniPathway: UPA00002 SRM_RS07375 75cbf54fdb848cc8227d73e6c229af1b 305 PANTHER PTHR10889:SF3 17 297 2.2E-119 T 22-04-2016 SRM_RS07375 75cbf54fdb848cc8227d73e6c229af1b 305 Gene3D G3DSA:3.20.20.70 41 297 2.6E-87 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 SRM_RS07375 75cbf54fdb848cc8227d73e6c229af1b 305 SUPERFAMILY SSF51569 43 285 9.94E-72 T 22-04-2016 SRM_RS07375 75cbf54fdb848cc8227d73e6c229af1b 305 Pfam PF01791 DeoC/LacD family aldolase 47 283 3.2E-24 T 22-04-2016 IPR002915 DeoC/FbaB/ lacD aldolase GO:0016829 SRM_RS07375 75cbf54fdb848cc8227d73e6c229af1b 305 PANTHER PTHR10889 17 297 2.2E-119 T 22-04-2016 IPR011343 Deoxyribose-phosphate aldolase GO:0004139|GO:0005737|GO:0009264 KEGG: 00030+4.1.2.4|MetaCyc: PWY-7180|UniPathway: UPA00002 SRM_RS07375 75cbf54fdb848cc8227d73e6c229af1b 305 SMART SM01133 45 286 1.7E-74 T 22-04-2016 IPR002915 DeoC/FbaB/ lacD aldolase GO:0016829 SRM_RS12190 f2948c1af35f87ee01b97f85b0922b89 584 TIGRFAM TIGR00110 ilvD: dihydroxy-acid dehydratase 26 567 3.2E-207 T 22-04-2016 IPR004404 Dihydroxy-acid dehydratase GO:0004160|GO:0009082 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 SRM_RS12190 f2948c1af35f87ee01b97f85b0922b89 584 SUPERFAMILY SSF143975 10 388 1.12E-130 T 22-04-2016 SRM_RS12190 f2948c1af35f87ee01b97f85b0922b89 584 Pfam PF00920 Dehydratase family 43 564 3.1E-198 T 22-04-2016 IPR000581 Dihydroxy-acid/6-phosphogluconate dehydratase GO:0003824|GO:0008152 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 SRM_RS12190 f2948c1af35f87ee01b97f85b0922b89 584 PANTHER PTHR21000 13 583 3.1E-267 T 22-04-2016 IPR000581 Dihydroxy-acid/6-phosphogluconate dehydratase GO:0003824|GO:0008152 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 SRM_RS12190 f2948c1af35f87ee01b97f85b0922b89 584 ProSitePatterns PS00887 Dihydroxy-acid and 6-phosphogluconate dehydratases signature 2. 475 486 - T 22-04-2016 IPR020558 Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site GO:0003824|GO:0008152 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 SRM_RS12190 f2948c1af35f87ee01b97f85b0922b89 584 Hamap MF_00012 Dihydroxy-acid dehydratase [ilvD]. 13 567 44.299 T 22-04-2016 IPR004404 Dihydroxy-acid dehydratase GO:0004160|GO:0009082 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 SRM_RS12190 f2948c1af35f87ee01b97f85b0922b89 584 SUPERFAMILY SSF52016 390 568 6.43E-56 T 22-04-2016 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel SRM_RS12190 f2948c1af35f87ee01b97f85b0922b89 584 ProSitePatterns PS00886 Dihydroxy-acid and 6-phosphogluconate dehydratases signature 1. 131 141 - T 22-04-2016 IPR020558 Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site GO:0003824|GO:0008152 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 SRM_RS06245 a9cb64203e00386ca0a8ff78e3e395e1 448 PANTHER PTHR33362 4 446 4.6E-212 T 22-04-2016 SRM_RS06245 a9cb64203e00386ca0a8ff78e3e395e1 448 PIRSF PIRSF006066 5 448 9.4E-66 T 22-04-2016 IPR004681 TRAP transporter permease protein GO:0016021 SRM_RS06245 a9cb64203e00386ca0a8ff78e3e395e1 448 PANTHER PTHR33362:SF7 4 446 4.6E-212 T 22-04-2016 SRM_RS06245 a9cb64203e00386ca0a8ff78e3e395e1 448 Pfam PF06808 Tripartite ATP-independent periplasmic transporter, DctM component 13 443 1.0E-100 T 22-04-2016 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit SRM_RS06245 a9cb64203e00386ca0a8ff78e3e395e1 448 TIGRFAM TIGR00786 dctM: TRAP transporter, DctM subunit 21 446 6.3E-100 T 22-04-2016 IPR004681 TRAP transporter permease protein GO:0016021 SRM_RS09265 9644f67d7ce283acb4e3d71d0280e234 81 Pfam PF13370 4Fe-4S single cluster domain of Ferredoxin I 16 69 2.4E-10 T 22-04-2016 SRM_RS09265 9644f67d7ce283acb4e3d71d0280e234 81 SUPERFAMILY SSF54862 13 72 5.0E-10 T 22-04-2016 SRM_RS09265 9644f67d7ce283acb4e3d71d0280e234 81 PANTHER PTHR36923 10 81 1.7E-13 T 22-04-2016 SRM_RS09265 9644f67d7ce283acb4e3d71d0280e234 81 Gene3D G3DSA:3.30.70.20 13 77 1.8E-16 T 22-04-2016 SRM_RS09265 9644f67d7ce283acb4e3d71d0280e234 81 PRINTS PR00352 3Fe-4S ferredoxin signature 27 37 4.22E-6 T 22-04-2016 IPR001080 3Fe-4S ferredoxin GO:0005506|GO:0009055 SRM_RS09265 9644f67d7ce283acb4e3d71d0280e234 81 PRINTS PR00352 3Fe-4S ferredoxin signature 16 27 4.22E-6 T 22-04-2016 IPR001080 3Fe-4S ferredoxin GO:0005506|GO:0009055 SRM_RS09265 9644f67d7ce283acb4e3d71d0280e234 81 PRINTS PR00352 3Fe-4S ferredoxin signature 57 69 4.22E-6 T 22-04-2016 IPR001080 3Fe-4S ferredoxin GO:0005506|GO:0009055 SRM_RS00885 3fce719222cf2a1c6aed7ca2e251b575 294 Pfam PF08340 Domain of unknown function (DUF1732) 210 294 1.4E-32 T 22-04-2016 IPR013551 Domain of unknown function DUF1732 SRM_RS00885 3fce719222cf2a1c6aed7ca2e251b575 294 PANTHER PTHR30636 1 294 4.0E-82 T 22-04-2016 SRM_RS00885 3fce719222cf2a1c6aed7ca2e251b575 294 Pfam PF03755 YicC-like family, N-terminal region 2 158 1.1E-35 T 22-04-2016 IPR013527 YicC-like, N-terminal SRM_RS00885 3fce719222cf2a1c6aed7ca2e251b575 294 TIGRFAM TIGR00255 TIGR00255: TIGR00255 family protein 1 294 6.4E-66 T 22-04-2016 IPR005229 Conserved hypothetical protein CHP00255 SRM_RS01595 2c289cbbb44f347ce68f387135133701 276 ProSitePatterns PS00141 Eukaryotic and viral aspartyl proteases active site. 150 161 - T 22-04-2016 IPR001969 Aspartic peptidase, active site GO:0004190|GO:0006508 SRM_RS07640 d756979973a64b794ddc4c04c23ceb16 473 PANTHER PTHR30332 150 425 1.0E-31 T 22-04-2016 SRM_RS07640 d756979973a64b794ddc4c04c23ceb16 473 Pfam PF00263 Bacterial type II and III secretion system protein 248 416 1.1E-38 T 22-04-2016 IPR004846 Type II/III secretion system GO:0009306 SRM_RS07640 d756979973a64b794ddc4c04c23ceb16 473 PRINTS PR01032 Gene IV protein signature 339 367 2.5E-5 T 22-04-2016 SRM_RS07640 d756979973a64b794ddc4c04c23ceb16 473 PRINTS PR01032 Gene IV protein signature 268 291 2.5E-5 T 22-04-2016 SRM_RS09225 4f09e525c6dff8a4d50095707a9b9c51 214 Pfam PF08241 Methyltransferase domain 50 146 3.9E-22 T 22-04-2016 IPR013216 Methyltransferase type 11 GO:0008152|GO:0008168 SRM_RS09225 4f09e525c6dff8a4d50095707a9b9c51 214 PANTHER PTHR10108 15 204 8.0E-32 T 22-04-2016 SRM_RS09225 4f09e525c6dff8a4d50095707a9b9c51 214 SUPERFAMILY SSF53335 12 202 1.19E-40 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SRM_RS09225 4f09e525c6dff8a4d50095707a9b9c51 214 Gene3D G3DSA:3.40.50.150 11 201 1.8E-40 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SRM_RS02425 cfb6f7052025fc81c83c2d5403d13d4d 168 Pfam PF05685 Putative restriction endonuclease 29 153 1.2E-15 T 22-04-2016 IPR008538 Domain of unknown function DUF820 SRM_RS02425 cfb6f7052025fc81c83c2d5403d13d4d 168 Gene3D G3DSA:3.90.1570.10 29 147 1.8E-20 T 22-04-2016 IPR012296 Nuclease, putative, TT1808 SRM_RS02425 cfb6f7052025fc81c83c2d5403d13d4d 168 SUPERFAMILY SSF52980 29 164 3.75E-21 T 22-04-2016 IPR011335 Restriction endonuclease type II-like SRM_RS03775 e59ff6a473e53feafa487659a0cfa8ff 1670 SUPERFAMILY SSF52129 405 791 1.88E-35 T 22-04-2016 IPR029030 Caspase-like domain SRM_RS03775 e59ff6a473e53feafa487659a0cfa8ff 1670 Pfam PF01364 Peptidase family C25 411 787 1.4E-50 T 22-04-2016 IPR001769 Gingipain GO:0006508|GO:0008234 SRM_RS03775 e59ff6a473e53feafa487659a0cfa8ff 1670 Pfam PF15711 Interleukin-like EMT inducer 1071 1182 1.1E-8 T 22-04-2016 SRM_RS03775 e59ff6a473e53feafa487659a0cfa8ff 1670 Gene3D G3DSA:3.40.50.1460 543 789 5.6E-22 T 22-04-2016 IPR029030 Caspase-like domain SRM_RS03775 e59ff6a473e53feafa487659a0cfa8ff 1670 Pfam PF07705 CARDB 794 899 2.5E-9 T 22-04-2016 IPR011635 CARDB domain SRM_RS09955 c9a20d0d60d3f338723eef27868972fa 174 TIGRFAM TIGR01382 PfpI: intracellular protease, PfpI family 8 172 2.5E-42 T 22-04-2016 IPR006286 Peptidase C56, PfpI GO:0016798 SRM_RS09955 c9a20d0d60d3f338723eef27868972fa 174 PANTHER PTHR11019 7 174 1.2E-46 T 22-04-2016 SRM_RS09955 c9a20d0d60d3f338723eef27868972fa 174 PANTHER PTHR11019:SF135 7 174 1.2E-46 T 22-04-2016 SRM_RS09955 c9a20d0d60d3f338723eef27868972fa 174 SUPERFAMILY SSF52317 7 171 9.36E-36 T 22-04-2016 IPR029062 Class I glutamine amidotransferase-like SRM_RS09955 c9a20d0d60d3f338723eef27868972fa 174 Gene3D G3DSA:3.40.50.880 7 172 1.2E-39 T 22-04-2016 IPR029062 Class I glutamine amidotransferase-like SRM_RS09955 c9a20d0d60d3f338723eef27868972fa 174 Pfam PF01965 DJ-1/PfpI family 7 169 3.4E-38 T 22-04-2016 IPR002818 DJ-1/PfpI SRM_RS05275 4bddc77f63cda5295e8803f73ccf8b24 292 Gene3D G3DSA:2.30.30.60 116 164 2.7E-15 T 22-04-2016 SRM_RS05275 4bddc77f63cda5295e8803f73ccf8b24 292 SUPERFAMILY SSF82861 19 99 3.79E-5 T 22-04-2016 IPR011014 Mechanosensitive ion channel MscS, transmembrane-2 GO:0016020 SRM_RS05275 4bddc77f63cda5295e8803f73ccf8b24 292 PANTHER PTHR30221 17 292 2.0E-61 T 22-04-2016 SRM_RS05275 4bddc77f63cda5295e8803f73ccf8b24 292 SUPERFAMILY SSF82689 167 265 2.09E-30 T 22-04-2016 IPR011066 Mechanosensitive ion channel MscS, C-terminal GO:0016020 SRM_RS05275 4bddc77f63cda5295e8803f73ccf8b24 292 Pfam PF00924 Mechanosensitive ion channel 61 255 2.1E-51 T 22-04-2016 IPR006685 Mechanosensitive ion channel MscS GO:0016020|GO:0055085 SRM_RS05275 4bddc77f63cda5295e8803f73ccf8b24 292 Gene3D G3DSA:3.30.70.100 169 253 8.0E-26 T 22-04-2016 SRM_RS05275 4bddc77f63cda5295e8803f73ccf8b24 292 SUPERFAMILY SSF50182 102 165 3.27E-16 T 22-04-2016 IPR010920 LSM domain SRM_RS09760 5a310aba78276e21d979b14b4b86a0db 522 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 236 260 1.6E-11 T 22-04-2016 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 SRM_RS09760 5a310aba78276e21d979b14b4b86a0db 522 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 376 402 1.6E-11 T 22-04-2016 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 SRM_RS09760 5a310aba78276e21d979b14b4b86a0db 522 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 324 343 1.6E-11 T 22-04-2016 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 SRM_RS09760 5a310aba78276e21d979b14b4b86a0db 522 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 164 188 1.6E-11 T 22-04-2016 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 SRM_RS09760 5a310aba78276e21d979b14b4b86a0db 522 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 134 153 1.6E-11 T 22-04-2016 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 SRM_RS09760 5a310aba78276e21d979b14b4b86a0db 522 PANTHER PTHR22773:SF49 1 501 1.8E-180 T 22-04-2016 SRM_RS09760 5a310aba78276e21d979b14b4b86a0db 522 Pfam PF00361 Proton-conducting membrane transporter 129 417 1.2E-54 T 22-04-2016 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit Reactome: REACT_6305 SRM_RS09760 5a310aba78276e21d979b14b4b86a0db 522 PANTHER PTHR22773 1 501 1.8E-180 T 22-04-2016 SRM_RS08955 c3176510f72d77f2fae5b94667b40598 284 Pfam PF14267 Domain of unknown function (DUF4357) 226 279 2.7E-22 T 22-04-2016 IPR025579 Domain of unknown function DUF4357 SRM_RS03370 fbe8e200bf97307b3d1ca91dae808291 203 Pfam PF13568 Outer membrane protein beta-barrel domain 6 183 1.5E-14 T 22-04-2016 IPR025665 Outer membrane protein beta-barrel domain SRM_RS14545 f84e6249ccf23f4b02defa9ebfa02611 166 Pfam PF06429 Flagellar basal body rod FlgEFG protein C-terminal 121 163 1.8E-8 T 22-04-2016 IPR010930 Flagellar basal-body/hook protein, C-terminal domain SRM_RS14545 f84e6249ccf23f4b02defa9ebfa02611 166 PANTHER PTHR30435:SF2 97 166 2.0E-31 T 22-04-2016 SRM_RS14545 f84e6249ccf23f4b02defa9ebfa02611 166 PANTHER PTHR30435:SF2 6 71 2.0E-31 T 22-04-2016 SRM_RS14545 f84e6249ccf23f4b02defa9ebfa02611 166 ProSitePatterns PS00588 Flagella basal body rod proteins signature. 17 37 - T 22-04-2016 IPR019776 Flagellar basal body rod protein, conserved site SRM_RS14545 f84e6249ccf23f4b02defa9ebfa02611 166 PANTHER PTHR30435 97 166 2.0E-31 T 22-04-2016 SRM_RS14545 f84e6249ccf23f4b02defa9ebfa02611 166 PANTHER PTHR30435 6 71 2.0E-31 T 22-04-2016 SRM_RS14545 f84e6249ccf23f4b02defa9ebfa02611 166 TIGRFAM TIGR01395 FlgC: flagellar basal-body rod protein FlgC 10 166 1.2E-34 T 22-04-2016 IPR006299 Flagellar basal-body rod protein FlgC GO:0030694|GO:0071973 SRM_RS00750 4f3206bd14d8668e26999bced4722fb9 211 Gene3D G3DSA:1.10.1740.10 60 115 3.2E-5 T 22-04-2016 SRM_RS00750 4f3206bd14d8668e26999bced4722fb9 211 SUPERFAMILY SSF88659 138 197 1.87E-9 T 22-04-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 SRM_RS00750 4f3206bd14d8668e26999bced4722fb9 211 Pfam PF08281 Sigma-70, region 4 144 196 1.6E-6 T 22-04-2016 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 SRM_RS00750 4f3206bd14d8668e26999bced4722fb9 211 SUPERFAMILY SSF88946 45 112 1.29E-5 T 22-04-2016 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 SRM_RS00750 4f3206bd14d8668e26999bced4722fb9 211 Gene3D G3DSA:1.10.10.10 143 198 1.1E-9 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SRM_RS00750 4f3206bd14d8668e26999bced4722fb9 211 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 50 197 6.7E-13 T 22-04-2016 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 SRM_RS03485 230ae6a5d377d94b728d8b980b106e4e 326 PANTHER PTHR33375 13 323 1.8E-94 T 22-04-2016 SRM_RS03485 230ae6a5d377d94b728d8b980b106e4e 326 SUPERFAMILY SSF110849 56 147 5.49E-28 T 22-04-2016 IPR003115 ParB/Sulfiredoxin SRM_RS03485 230ae6a5d377d94b728d8b980b106e4e 326 Pfam PF02195 ParB-like nuclease domain 56 144 8.4E-26 T 22-04-2016 IPR003115 ParB/Sulfiredoxin SRM_RS03485 230ae6a5d377d94b728d8b980b106e4e 326 Gene3D G3DSA:3.90.1530.10 53 151 3.0E-37 T 22-04-2016 SRM_RS03485 230ae6a5d377d94b728d8b980b106e4e 326 SMART SM00470 55 145 2.2E-34 T 22-04-2016 IPR003115 ParB/Sulfiredoxin SRM_RS03485 230ae6a5d377d94b728d8b980b106e4e 326 SUPERFAMILY SSF109709 137 247 4.45E-36 T 22-04-2016 SRM_RS03485 230ae6a5d377d94b728d8b980b106e4e 326 TIGRFAM TIGR00180 parB_part: ParB/RepB/Spo0J family partition protein 53 228 5.4E-56 T 22-04-2016 IPR004437 ParB/RepB/Spo0J partition protein family GO:0003677 SRM_RS03485 230ae6a5d377d94b728d8b980b106e4e 326 Gene3D G3DSA:1.10.260.40 161 191 3.7E-4 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 SRM_RS03290 8734541bc3e1623cab0760334f0d98e2 496 Gene3D G3DSA:1.20.1600.10 62 485 1.2E-110 T 22-04-2016 SRM_RS03290 8734541bc3e1623cab0760334f0d98e2 496 SUPERFAMILY SSF56954 64 485 9.29E-107 T 22-04-2016 SRM_RS03290 8734541bc3e1623cab0760334f0d98e2 496 SUPERFAMILY SSF56954 4 30 9.29E-107 T 22-04-2016 SRM_RS03290 8734541bc3e1623cab0760334f0d98e2 496 TIGRFAM TIGR01845 outer_NodT: efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family 14 481 1.5E-110 T 22-04-2016 IPR010131 RND efflux system, outer membrane lipoprotein, NodT GO:0005215|GO:0006810|GO:0008289|GO:0016020 SRM_RS03290 8734541bc3e1623cab0760334f0d98e2 496 Pfam PF02321 Outer membrane efflux protein 74 270 2.7E-24 T 22-04-2016 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 SRM_RS03290 8734541bc3e1623cab0760334f0d98e2 496 Pfam PF02321 Outer membrane efflux protein 300 480 3.6E-32 T 22-04-2016 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 SRM_RS03290 8734541bc3e1623cab0760334f0d98e2 496 PANTHER PTHR30203 1 483 3.2E-88 T 22-04-2016 SRM_RS06115 6437425088c9f74fa479357d44de05b8 69 PRINTS PR00050 Cold shock protein signature 4 19 9.9E-10 T 22-04-2016 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 SRM_RS06115 6437425088c9f74fa479357d44de05b8 69 PRINTS PR00050 Cold shock protein signature 37 55 9.9E-10 T 22-04-2016 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 SRM_RS06115 6437425088c9f74fa479357d44de05b8 69 Pfam PF00313 'Cold-shock' DNA-binding domain 3 62 1.9E-20 T 22-04-2016 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 SRM_RS06115 6437425088c9f74fa479357d44de05b8 69 PIRSF PIRSF002599 1 68 1.5E-17 T 22-04-2016 IPR012156 Cold shock, CspA GO:0003676 SRM_RS06115 6437425088c9f74fa479357d44de05b8 69 SMART SM00357 3 64 1.4E-20 T 22-04-2016 IPR011129 Cold shock protein GO:0003676 SRM_RS06115 6437425088c9f74fa479357d44de05b8 69 PANTHER PTHR11544 1 64 1.6E-15 T 22-04-2016 SRM_RS06115 6437425088c9f74fa479357d44de05b8 69 Gene3D G3DSA:2.40.50.140 1 66 2.8E-24 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold SRM_RS06115 6437425088c9f74fa479357d44de05b8 69 SUPERFAMILY SSF50249 1 63 7.48E-20 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold SRM_RS12240 2292c4ed4511e56b64bc35bf85bcb79e 640 Gene3D G3DSA:1.20.1560.10 49 361 3.4E-93 T 22-04-2016 SRM_RS12240 2292c4ed4511e56b64bc35bf85bcb79e 640 SUPERFAMILY SSF52540 372 621 3.3E-87 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SRM_RS12240 2292c4ed4511e56b64bc35bf85bcb79e 640 PANTHER PTHR24221 27 630 1.3E-226 T 22-04-2016 SRM_RS12240 2292c4ed4511e56b64bc35bf85bcb79e 640 Pfam PF00005 ABC transporter 401 550 2.4E-33 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 SRM_RS12240 2292c4ed4511e56b64bc35bf85bcb79e 640 SMART SM00382 410 596 1.2E-13 T 22-04-2016 IPR003593 AAA+ ATPase domain SRM_RS12240 2292c4ed4511e56b64bc35bf85bcb79e 640 Pfam PF00664 ABC transporter transmembrane region 64 333 2.4E-58 T 22-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 SRM_RS12240 2292c4ed4511e56b64bc35bf85bcb79e 640 SUPERFAMILY SSF90123 49 367 6.54E-88 T 22-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 SRM_RS12240 2292c4ed4511e56b64bc35bf85bcb79e 640 Gene3D G3DSA:3.40.50.300 379 614 1.1E-76 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SRM_RS12725 c4bd5c79103ecfe34055d2a2b72567df 780 ProSitePatterns PS00218 Amino acid permeases signature. 39 69 - T 22-04-2016 IPR004840 Amino acid permease, conserved site GO:0006865|GO:0016021|GO:0055085 SRM_RS12725 c4bd5c79103ecfe34055d2a2b72567df 780 Pfam PF13520 Amino acid permease 10 394 2.6E-44 T 22-04-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 SRM_RS12725 c4bd5c79103ecfe34055d2a2b72567df 780 SUPERFAMILY SSF52402 628 750 5.78E-14 T 22-04-2016 SRM_RS12725 c4bd5c79103ecfe34055d2a2b72567df 780 Pfam PF00582 Universal stress protein family 629 750 1.5E-6 T 22-04-2016 IPR006016 UspA GO:0006950 SRM_RS12725 c4bd5c79103ecfe34055d2a2b72567df 780 PANTHER PTHR11785 3 457 2.4E-95 T 22-04-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 SRM_RS12725 c4bd5c79103ecfe34055d2a2b72567df 780 Gene3D G3DSA:3.40.50.620 608 750 5.2E-12 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold SRM_RS07400 8a4749d89ad30896d200e783300f8d14 470 ProSitePatterns PS00392 DDC / GAD / HDC / TyrDC pyridoxal-phosphate attachment site. 264 285 - T 22-04-2016 IPR021115 Pyridoxal-phosphate binding site GO:0016831 SRM_RS07400 8a4749d89ad30896d200e783300f8d14 470 SUPERFAMILY SSF53383 8 397 5.24E-79 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase SRM_RS07400 8a4749d89ad30896d200e783300f8d14 470 Gene3D G3DSA:3.90.1150.10 327 400 3.2E-4 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 SRM_RS07400 8a4749d89ad30896d200e783300f8d14 470 PANTHER PTHR11999:SF5 46 378 4.4E-57 T 22-04-2016 SRM_RS07400 8a4749d89ad30896d200e783300f8d14 470 Gene3D G3DSA:3.40.640.10 77 326 1.2E-64 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 SRM_RS07400 8a4749d89ad30896d200e783300f8d14 470 PANTHER PTHR11999 46 378 4.4E-57 T 22-04-2016 SRM_RS07400 8a4749d89ad30896d200e783300f8d14 470 Pfam PF00282 Pyridoxal-dependent decarboxylase conserved domain 63 377 8.0E-26 T 22-04-2016 IPR002129 Pyridoxal phosphate-dependent decarboxylase GO:0016831|GO:0019752|GO:0030170 SRM_RS01205 7a67dff7825cee567de750c04d4196f0 651 SMART SM00091 29 95 3.9E-4 T 22-04-2016 IPR000014 PAS domain SRM_RS01205 7a67dff7825cee567de750c04d4196f0 651 SMART SM00091 155 225 15.0 T 22-04-2016 IPR000014 PAS domain SRM_RS01205 7a67dff7825cee567de750c04d4196f0 651 SUPERFAMILY SSF55874 513 644 8.77E-27 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SRM_RS01205 7a67dff7825cee567de750c04d4196f0 651 Pfam PF08448 PAS fold 182 270 5.9E-5 T 22-04-2016 IPR013656 PAS fold-4 SRM_RS01205 7a67dff7825cee567de750c04d4196f0 651 Pfam PF08448 PAS fold 36 138 2.8E-13 T 22-04-2016 IPR013656 PAS fold-4 SRM_RS01205 7a67dff7825cee567de750c04d4196f0 651 SUPERFAMILY SSF55785 183 277 8.98E-12 T 22-04-2016 IPR000014 PAS domain SRM_RS01205 7a67dff7825cee567de750c04d4196f0 651 SUPERFAMILY SSF47384 433 503 1.49E-13 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SRM_RS01205 7a67dff7825cee567de750c04d4196f0 651 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 548 644 1.5E-14 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SRM_RS01205 7a67dff7825cee567de750c04d4196f0 651 Pfam PF01590 GAF domain 302 431 1.6E-5 T 22-04-2016 IPR003018 GAF domain GO:0005515 SRM_RS01205 7a67dff7825cee567de750c04d4196f0 651 Gene3D G3DSA:3.30.565.10 493 644 6.4E-28 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SRM_RS01205 7a67dff7825cee567de750c04d4196f0 651 PANTHER PTHR24423 445 644 5.8E-65 T 22-04-2016 SRM_RS01205 7a67dff7825cee567de750c04d4196f0 651 PANTHER PTHR24423 26 286 5.8E-65 T 22-04-2016 SRM_RS01205 7a67dff7825cee567de750c04d4196f0 651 PRINTS PR00344 Bacterial sensor protein C-terminal signature 609 627 1.7E-6 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SRM_RS01205 7a67dff7825cee567de750c04d4196f0 651 PRINTS PR00344 Bacterial sensor protein C-terminal signature 580 594 1.7E-6 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SRM_RS01205 7a67dff7825cee567de750c04d4196f0 651 SUPERFAMILY SSF55781 298 445 8.07E-20 T 22-04-2016 IPR029016 GAF domain-like SRM_RS01205 7a67dff7825cee567de750c04d4196f0 651 Gene3D G3DSA:1.10.287.130 444 492 2.0E-11 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SRM_RS01205 7a67dff7825cee567de750c04d4196f0 651 SMART SM00065 296 442 4.7E-6 T 22-04-2016 IPR003018 GAF domain GO:0005515 SRM_RS01205 7a67dff7825cee567de750c04d4196f0 651 Gene3D G3DSA:3.30.450.40 273 443 4.2E-17 T 22-04-2016 IPR029016 GAF domain-like SRM_RS01205 7a67dff7825cee567de750c04d4196f0 651 SMART SM00387 547 649 5.7E-27 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SRM_RS01205 7a67dff7825cee567de750c04d4196f0 651 Pfam PF00512 His Kinase A (phospho-acceptor) domain 449 505 3.7E-10 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SRM_RS01205 7a67dff7825cee567de750c04d4196f0 651 Gene3D G3DSA:3.30.450.20 148 269 4.1E-12 T 22-04-2016 SRM_RS01205 7a67dff7825cee567de750c04d4196f0 651 Gene3D G3DSA:3.30.450.20 26 138 1.0E-14 T 22-04-2016 SRM_RS01205 7a67dff7825cee567de750c04d4196f0 651 SMART SM00388 447 508 7.5E-10 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SRM_RS01205 7a67dff7825cee567de750c04d4196f0 651 SUPERFAMILY SSF55785 26 138 7.85E-13 T 22-04-2016 IPR000014 PAS domain SRM_RS01205 7a67dff7825cee567de750c04d4196f0 651 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 183 276 1.3E-8 T 22-04-2016 IPR000014 PAS domain SRM_RS14480 d2509d1d23e37101b6dc97d500c3ea0c 172 Gene3D G3DSA:2.30.30.40 87 140 5.6E-14 T 22-04-2016 SRM_RS14480 d2509d1d23e37101b6dc97d500c3ea0c 172 Pfam PF01584 CheW-like domain 13 149 2.8E-42 T 22-04-2016 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 SRM_RS14480 d2509d1d23e37101b6dc97d500c3ea0c 172 Gene3D G3DSA:2.40.50.180 35 86 3.2E-15 T 22-04-2016 SRM_RS14480 d2509d1d23e37101b6dc97d500c3ea0c 172 SMART SM00260 9 146 6.2E-48 T 22-04-2016 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 SRM_RS14480 d2509d1d23e37101b6dc97d500c3ea0c 172 SUPERFAMILY SSF50341 7 150 5.1E-44 T 22-04-2016 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 SRM_RS14480 d2509d1d23e37101b6dc97d500c3ea0c 172 PANTHER PTHR22617 8 162 4.5E-54 T 22-04-2016 SRM_RS03330 86c450207dbdbfa642d92c3e461cbe6f 240 SUPERFAMILY SSF54292 2 106 1.01E-24 T 22-04-2016 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 SRM_RS03330 86c450207dbdbfa642d92c3e461cbe6f 240 Pfam PF13183 4Fe-4S dicluster domain 145 218 1.8E-11 T 22-04-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain SRM_RS03330 86c450207dbdbfa642d92c3e461cbe6f 240 Gene3D G3DSA:3.10.20.30 1 106 3.5E-34 T 22-04-2016 IPR012675 Beta-grasp domain SRM_RS03330 86c450207dbdbfa642d92c3e461cbe6f 240 SUPERFAMILY SSF46548 108 231 2.27E-34 T 22-04-2016 IPR009051 Alpha-helical ferredoxin GO:0051536 SRM_RS03330 86c450207dbdbfa642d92c3e461cbe6f 240 Gene3D G3DSA:1.10.1060.10 107 234 8.1E-39 T 22-04-2016 SRM_RS03330 86c450207dbdbfa642d92c3e461cbe6f 240 Pfam PF13085 2Fe-2S iron-sulfur cluster binding domain 5 112 8.0E-34 T 22-04-2016 IPR025192 Succinate dehydogenase/fumarate reductase N-terminal GO:0009055|GO:0051536 KEGG: 00020+1.3.5.1|KEGG: 00190+1.3.5.1|KEGG: 00650+1.3.5.1|KEGG: 00720+1.3.5.1|MetaCyc: PWY-3781|MetaCyc: PWY-4302|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7279 SRM_RS03330 86c450207dbdbfa642d92c3e461cbe6f 240 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 148 159 - T 22-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site SRM_RS03330 86c450207dbdbfa642d92c3e461cbe6f 240 PANTHER PTHR11921 1 232 1.2E-91 T 22-04-2016 SRM_RS03330 86c450207dbdbfa642d92c3e461cbe6f 240 TIGRFAM TIGR00384 dhsB: succinate dehydrogenase and fumarate reductase iron-sulfur protein 7 227 3.8E-71 T 22-04-2016 IPR004489 Succinate dehydrogenase/fumarate reductase iron-sulphur protein GO:0006099|GO:0016491|GO:0055114 KEGG: 00020+1.3.5.1|KEGG: 00190+1.3.5.1|KEGG: 00650+1.3.5.1|KEGG: 00720+1.3.5.1|MetaCyc: PWY-3781|MetaCyc: PWY-4302|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7279 SRM_RS03160 61322331376f0312761cabcac668a479 426 PANTHER PTHR19328 84 413 1.5E-58 T 22-04-2016 SRM_RS03160 61322331376f0312761cabcac668a479 426 Pfam PF07995 Glucose / Sorbosone dehydrogenase 93 421 3.6E-126 T 22-04-2016 IPR012938 Glucose/Sorbosone dehydrogenase GO:0005975|GO:0016901|GO:0048038 SRM_RS03160 61322331376f0312761cabcac668a479 426 Gene3D G3DSA:2.120.10.30 46 425 1.7E-98 T 22-04-2016 IPR011042 Six-bladed beta-propeller, TolB-like SRM_RS03160 61322331376f0312761cabcac668a479 426 SUPERFAMILY SSF50952 84 425 3.14E-45 T 22-04-2016 IPR011041 Soluble quinoprotein glucose/sorbosone dehydrogenase GO:0003824 SRM_RS10335 3b74de5d3eaf96507610253b7736913f 685 Gene3D G3DSA:3.10.50.40 157 267 9.2E-25 T 22-04-2016 SRM_RS10335 3b74de5d3eaf96507610253b7736913f 685 Gene3D G3DSA:3.10.50.40 269 386 2.7E-26 T 22-04-2016 SRM_RS10335 3b74de5d3eaf96507610253b7736913f 685 PANTHER PTHR10657 269 528 2.6E-26 T 22-04-2016 SRM_RS10335 3b74de5d3eaf96507610253b7736913f 685 Pfam PF00639 PPIC-type PPIASE domain 273 365 1.4E-20 T 22-04-2016 IPR000297 Peptidyl-prolyl cis-trans isomerase, PpiC-type GO:0016853 SRM_RS10335 3b74de5d3eaf96507610253b7736913f 685 SUPERFAMILY SSF54534 158 264 9.16E-19 T 22-04-2016 SRM_RS10335 3b74de5d3eaf96507610253b7736913f 685 ProSitePatterns PS01096 PpiC-type peptidyl-prolyl cis-trans isomerase signature. 303 324 - T 22-04-2016 IPR023058 Peptidyl-prolyl cis-trans isomerase, PpiC-type, conserved site SRM_RS10335 3b74de5d3eaf96507610253b7736913f 685 Pfam PF13616 PPIC-type PPIASE domain 155 262 1.8E-15 T 22-04-2016 SRM_RS10335 3b74de5d3eaf96507610253b7736913f 685 SUPERFAMILY SSF54534 269 367 7.2E-21 T 22-04-2016 SRM_RS13330 395f73f9cbeb8d88fb5d1f267b6ca4ed 1065 Pfam PF07676 WD40-like Beta Propeller Repeat 468 499 3.2E-6 T 22-04-2016 IPR011659 WD40-like Beta Propeller SRM_RS13330 395f73f9cbeb8d88fb5d1f267b6ca4ed 1065 Pfam PF07676 WD40-like Beta Propeller Repeat 385 409 0.002 T 22-04-2016 IPR011659 WD40-like Beta Propeller SRM_RS13330 395f73f9cbeb8d88fb5d1f267b6ca4ed 1065 Pfam PF07676 WD40-like Beta Propeller Repeat 529 559 1.7E-6 T 22-04-2016 IPR011659 WD40-like Beta Propeller SRM_RS13330 395f73f9cbeb8d88fb5d1f267b6ca4ed 1065 Pfam PF07676 WD40-like Beta Propeller Repeat 332 351 1.8E-4 T 22-04-2016 IPR011659 WD40-like Beta Propeller SRM_RS13330 395f73f9cbeb8d88fb5d1f267b6ca4ed 1065 Pfam PF07676 WD40-like Beta Propeller Repeat 433 453 0.0043 T 22-04-2016 IPR011659 WD40-like Beta Propeller SRM_RS13330 395f73f9cbeb8d88fb5d1f267b6ca4ed 1065 Pfam PF04450 Peptidase of plants and bacteria 165 295 2.0E-5 T 22-04-2016 IPR007541 Uncharacterised protein family, basic secretory protein SRM_RS13330 395f73f9cbeb8d88fb5d1f267b6ca4ed 1065 PANTHER PTHR36842 335 554 2.8E-18 T 22-04-2016 SRM_RS13330 395f73f9cbeb8d88fb5d1f267b6ca4ed 1065 SUPERFAMILY SSF82171 333 604 2.94E-46 T 22-04-2016 SRM_RS13330 395f73f9cbeb8d88fb5d1f267b6ca4ed 1065 Gene3D G3DSA:2.130.10.10 319 626 1.3E-54 T 22-04-2016 IPR015943 WD40/YVTN repeat-like-containing domain GO:0005515 SRM_RS06840 930f2e14583cc4e5dc6249e8e52ff4d7 130 Gene3D G3DSA:3.40.1230.10 8 130 4.3E-29 T 22-04-2016 IPR007523 NDUFAF3/Mth938 domain-containing protein SRM_RS06840 930f2e14583cc4e5dc6249e8e52ff4d7 130 Pfam PF04430 Protein of unknown function (DUF498/DUF598) 11 127 9.5E-14 T 22-04-2016 IPR007523 NDUFAF3/Mth938 domain-containing protein SRM_RS06840 930f2e14583cc4e5dc6249e8e52ff4d7 130 PANTHER PTHR15811:SF5 6 130 1.1E-59 T 22-04-2016 SRM_RS06840 930f2e14583cc4e5dc6249e8e52ff4d7 130 PANTHER PTHR15811 6 130 1.1E-59 T 22-04-2016 SRM_RS06840 930f2e14583cc4e5dc6249e8e52ff4d7 130 SUPERFAMILY SSF64076 8 130 1.19E-24 T 22-04-2016 IPR007523 NDUFAF3/Mth938 domain-containing protein SRM_RS09105 56043031b9f3d4d1208004e278736db1 396 TIGRFAM TIGR00374 TIGR00374: TIGR00374 family protein 20 340 3.0E-12 T 22-04-2016 IPR022791 Lysylphosphatidylglycerol synthetase/glycosyltransferase AglD SRM_RS09105 56043031b9f3d4d1208004e278736db1 396 Pfam PF03706 Lysylphosphatidylglycerol synthase TM region 10 333 9.9E-60 T 22-04-2016 IPR022791 Lysylphosphatidylglycerol synthetase/glycosyltransferase AglD SRM_RS09105 56043031b9f3d4d1208004e278736db1 396 PANTHER PTHR39087 5 374 1.5E-12 T 22-04-2016 SRM_RS03000 e9c2084475279e512cea00a71b3bb8a5 992 Pfam PF07676 WD40-like Beta Propeller Repeat 492 516 6.8E-5 T 22-04-2016 IPR011659 WD40-like Beta Propeller SRM_RS03000 e9c2084475279e512cea00a71b3bb8a5 992 Pfam PF07676 WD40-like Beta Propeller Repeat 395 426 0.0052 T 22-04-2016 IPR011659 WD40-like Beta Propeller SRM_RS03000 e9c2084475279e512cea00a71b3bb8a5 992 Gene3D G3DSA:2.130.10.10 366 544 1.4E-39 T 22-04-2016 IPR015943 WD40/YVTN repeat-like-containing domain GO:0005515 SRM_RS03000 e9c2084475279e512cea00a71b3bb8a5 992 SUPERFAMILY SSF82171 300 529 9.42E-33 T 22-04-2016 SRM_RS03000 e9c2084475279e512cea00a71b3bb8a5 992 Gene3D G3DSA:2.40.160.50 836 987 1.6E-8 T 22-04-2016 SRM_RS03000 e9c2084475279e512cea00a71b3bb8a5 992 Gene3D G3DSA:2.120.10.30 295 365 5.1E-6 T 22-04-2016 IPR011042 Six-bladed beta-propeller, TolB-like SRM_RS11610 837aa0746368f133954625cb14b51c9a 97 Pfam PF02597 ThiS family 12 97 9.5E-14 T 22-04-2016 IPR003749 ThiamineS/Molybdopterin converting factor subunit 1 SRM_RS11610 837aa0746368f133954625cb14b51c9a 97 PANTHER PTHR38031:SF1 9 97 2.2E-21 T 22-04-2016 SRM_RS11610 837aa0746368f133954625cb14b51c9a 97 Gene3D G3DSA:3.10.20.30 9 95 9.2E-28 T 22-04-2016 IPR012675 Beta-grasp domain SRM_RS11610 837aa0746368f133954625cb14b51c9a 97 SUPERFAMILY SSF54285 3 97 3.18E-23 T 22-04-2016 IPR016155 Molybdopterin synthase/thiamin biosynthesis sulphur carrier, beta-grasp SRM_RS11610 837aa0746368f133954625cb14b51c9a 97 PANTHER PTHR38031 9 97 2.2E-21 T 22-04-2016 SRM_RS15330 1cbeee0a50e253d4ab121a72933750c5 270 PANTHER PTHR10173:SF6 32 174 3.0E-30 T 22-04-2016 SRM_RS15330 1cbeee0a50e253d4ab121a72933750c5 270 PANTHER PTHR10173 32 174 3.0E-30 T 22-04-2016 IPR028427 Peptide methionine sulfoxide reductase GO:0006979|GO:0016671|GO:0030091 SRM_RS15330 1cbeee0a50e253d4ab121a72933750c5 270 Pfam PF01625 Peptide methionine sulfoxide reductase 59 195 6.8E-26 T 22-04-2016 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 SRM_RS15330 1cbeee0a50e253d4ab121a72933750c5 270 Gene3D G3DSA:3.30.1060.10 34 195 2.2E-36 T 22-04-2016 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 SRM_RS15330 1cbeee0a50e253d4ab121a72933750c5 270 SUPERFAMILY SSF55068 48 195 2.09E-37 T 22-04-2016 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 SRM_RS11245 e30fbd06a2d8794db9d2dcf7e8f05c7a 327 SUPERFAMILY SSF52518 2 204 8.57E-67 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold SRM_RS11245 e30fbd06a2d8794db9d2dcf7e8f05c7a 327 Pfam PF02779 Transketolase, pyrimidine binding domain 4 179 1.7E-45 T 22-04-2016 IPR005475 Transketolase-like, pyrimidine-binding domain SRM_RS11245 e30fbd06a2d8794db9d2dcf7e8f05c7a 327 Gene3D G3DSA:3.40.50.970 2 196 1.3E-86 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold SRM_RS11245 e30fbd06a2d8794db9d2dcf7e8f05c7a 327 Gene3D G3DSA:3.40.50.920 197 320 9.5E-44 T 22-04-2016 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 SRM_RS11245 e30fbd06a2d8794db9d2dcf7e8f05c7a 327 SUPERFAMILY SSF52922 188 324 5.23E-42 T 22-04-2016 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 SRM_RS11245 e30fbd06a2d8794db9d2dcf7e8f05c7a 327 Pfam PF02780 Transketolase, C-terminal domain 194 314 2.7E-39 T 22-04-2016 IPR033248 Transketolase, C-terminal domain SRM_RS11245 e30fbd06a2d8794db9d2dcf7e8f05c7a 327 PANTHER PTHR11624 6 327 2.3E-149 T 22-04-2016 IPR033247 Transketolase family SRM_RS11245 e30fbd06a2d8794db9d2dcf7e8f05c7a 327 SMART SM00861 4 179 1.1E-58 T 22-04-2016 IPR005475 Transketolase-like, pyrimidine-binding domain SRM_RS05830 aad5faf8c0c4be59c15e1b1842283ee3 412 Gene3D G3DSA:1.20.120.220 206 374 1.3E-35 T 22-04-2016 IPR000568 ATPase, F0 complex, subunit A GO:0015078|GO:0015986 SRM_RS05830 aad5faf8c0c4be59c15e1b1842283ee3 412 PRINTS PR00123 ATP synthase A subunit signature 292 314 2.12E-18 T 22-04-2016 IPR000568 ATPase, F0 complex, subunit A GO:0015078|GO:0015986 SRM_RS05830 aad5faf8c0c4be59c15e1b1842283ee3 412 PRINTS PR00123 ATP synthase A subunit signature 213 229 2.12E-18 T 22-04-2016 IPR000568 ATPase, F0 complex, subunit A GO:0015078|GO:0015986 SRM_RS05830 aad5faf8c0c4be59c15e1b1842283ee3 412 PRINTS PR00123 ATP synthase A subunit signature 272 287 2.12E-18 T 22-04-2016 IPR000568 ATPase, F0 complex, subunit A GO:0015078|GO:0015986 SRM_RS05830 aad5faf8c0c4be59c15e1b1842283ee3 412 PRINTS PR00123 ATP synthase A subunit signature 354 369 2.12E-18 T 22-04-2016 IPR000568 ATPase, F0 complex, subunit A GO:0015078|GO:0015986 SRM_RS05830 aad5faf8c0c4be59c15e1b1842283ee3 412 PANTHER PTHR11410 182 377 2.5E-42 T 22-04-2016 IPR000568 ATPase, F0 complex, subunit A GO:0015078|GO:0015986 SRM_RS05830 aad5faf8c0c4be59c15e1b1842283ee3 412 TIGRFAM TIGR01131 ATP_synt_6_or_A: ATP synthase F0, A subunit 146 368 1.1E-36 T 22-04-2016 IPR000568 ATPase, F0 complex, subunit A GO:0015078|GO:0015986 SRM_RS05830 aad5faf8c0c4be59c15e1b1842283ee3 412 ProSitePatterns PS00449 ATP synthase a subunit signature. 295 304 - T 22-04-2016 IPR023011 ATPase, F0 complex, subunit A, active site SRM_RS05830 aad5faf8c0c4be59c15e1b1842283ee3 412 Pfam PF00119 ATP synthase A chain 148 367 2.1E-45 T 22-04-2016 IPR000568 ATPase, F0 complex, subunit A GO:0015078|GO:0015986 SRM_RS05830 aad5faf8c0c4be59c15e1b1842283ee3 412 SUPERFAMILY SSF81336 205 367 1.29E-31 T 22-04-2016 IPR000568 ATPase, F0 complex, subunit A GO:0015078|GO:0015986 SRM_RS05830 aad5faf8c0c4be59c15e1b1842283ee3 412 Hamap MF_01393 ATP synthase subunit a [atpB]. 123 374 12.976 T 22-04-2016 IPR000568 ATPase, F0 complex, subunit A GO:0015078|GO:0015986 SRM_RS15570 a34657b300aab6f1f99662727836ac12 614 SMART SM00304 235 287 1.8E-7 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 SRM_RS15570 a34657b300aab6f1f99662727836ac12 614 SMART SM00304 388 446 120.0 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 SRM_RS15570 a34657b300aab6f1f99662727836ac12 614 SUPERFAMILY SSF58104 255 569 7.32E-69 T 22-04-2016 SRM_RS15570 a34657b300aab6f1f99662727836ac12 614 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 365 567 3.5E-45 T 22-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 SRM_RS15570 a34657b300aab6f1f99662727836ac12 614 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 78 103 3.5E-13 T 22-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 SRM_RS15570 a34657b300aab6f1f99662727836ac12 614 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 400 427 3.5E-13 T 22-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 SRM_RS15570 a34657b300aab6f1f99662727836ac12 614 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 475 504 3.5E-13 T 22-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 SRM_RS15570 a34657b300aab6f1f99662727836ac12 614 Gene3D G3DSA:1.10.287.950 316 538 2.9E-49 T 22-04-2016 SRM_RS15570 a34657b300aab6f1f99662727836ac12 614 PANTHER PTHR32089 243 571 1.1E-97 T 22-04-2016 SRM_RS15570 a34657b300aab6f1f99662727836ac12 614 Pfam PF00672 HAMP domain 244 283 4.1E-7 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 SRM_RS15570 a34657b300aab6f1f99662727836ac12 614 SMART SM00283 302 568 6.9E-66 T 22-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 SRM_RS06095 c594ee621f102c4057214a5578ad08db 291 ProSitePatterns PS00379 CDP-alcohol phosphatidyltransferases signature. 92 114 - T 22-04-2016 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 SRM_RS06095 c594ee621f102c4057214a5578ad08db 291 TIGRFAM TIGR00473 pssA: CDP-diacylglycerol-serine O-phosphatidyltransferase 56 221 1.4E-40 T 22-04-2016 IPR004533 CDP-diacylglycerol--serine O-phosphatidyltransferase KEGG: 00260+2.7.8.8|KEGG: 00564+2.7.8.8|MetaCyc: PWY-5669 SRM_RS06095 c594ee621f102c4057214a5578ad08db 291 PANTHER PTHR15362:SF2 49 181 1.4E-26 T 22-04-2016 SRM_RS06095 c594ee621f102c4057214a5578ad08db 291 Pfam PF01066 CDP-alcohol phosphatidyltransferase 51 114 1.2E-11 T 22-04-2016 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 SRM_RS06095 c594ee621f102c4057214a5578ad08db 291 PANTHER PTHR15362 49 181 1.4E-26 T 22-04-2016 SRM_RS06805 417624211520464811c2ce7e795a6528 473 Gene3D G3DSA:3.40.50.1100 42 146 1.1E-35 T 22-04-2016 SRM_RS06805 417624211520464811c2ce7e795a6528 473 Gene3D G3DSA:3.40.50.1100 152 326 8.6E-72 T 22-04-2016 SRM_RS06805 417624211520464811c2ce7e795a6528 473 Gene3D G3DSA:3.40.50.1100 2 41 8.6E-72 T 22-04-2016 SRM_RS06805 417624211520464811c2ce7e795a6528 473 PANTHER PTHR10314:SF8 4 363 5.4E-140 T 22-04-2016 SRM_RS06805 417624211520464811c2ce7e795a6528 473 SUPERFAMILY SSF54631 341 463 3.54E-16 T 22-04-2016 SRM_RS06805 417624211520464811c2ce7e795a6528 473 SMART SM00116 348 396 1.5E-4 T 22-04-2016 IPR000644 CBS domain SRM_RS06805 417624211520464811c2ce7e795a6528 473 SMART SM00116 413 462 12.0 T 22-04-2016 IPR000644 CBS domain SRM_RS06805 417624211520464811c2ce7e795a6528 473 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 8 307 2.6E-68 T 22-04-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme SRM_RS06805 417624211520464811c2ce7e795a6528 473 Pfam PF00571 CBS domain 347 395 8.7E-8 T 22-04-2016 IPR000644 CBS domain SRM_RS06805 417624211520464811c2ce7e795a6528 473 SUPERFAMILY SSF53686 2 328 8.12E-95 T 22-04-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme SRM_RS06805 417624211520464811c2ce7e795a6528 473 Gene3D G3DSA:3.10.580.10 346 463 2.9E-16 T 22-04-2016 SRM_RS06805 417624211520464811c2ce7e795a6528 473 TIGRFAM TIGR01137 cysta_beta: cystathionine beta-synthase 3 461 3.7E-155 T 22-04-2016 IPR005857 Cystathionine beta-synthase GO:0004122|GO:0005737|GO:0019343 KEGG: 00260+4.2.1.22|KEGG: 00270+4.2.1.22|MetaCyc: PWY-801|UniPathway: UPA00136 SRM_RS06805 417624211520464811c2ce7e795a6528 473 PANTHER PTHR10314 4 363 5.4E-140 T 22-04-2016 SRM_RS06805 417624211520464811c2ce7e795a6528 473 ProSitePatterns PS00901 Cysteine synthase/cystathionine beta-synthase P-phosphate attachment site. 32 50 - T 22-04-2016 IPR001216 Cysteine synthase/cystathionine beta-synthase, pyridoxal-phosphate attachment site GO:0006535 SRM_RS04425 f3311222db625fa1b66210afd36c75ed 118 SUPERFAMILY SSF51735 6 72 7.51E-15 T 22-04-2016 IPR016040 NAD(P)-binding domain SRM_RS04425 f3311222db625fa1b66210afd36c75ed 118 PANTHER PTHR10366:SF77 2 70 1.4E-23 T 22-04-2016 SRM_RS04425 f3311222db625fa1b66210afd36c75ed 118 Pfam PF01370 NAD dependent epimerase/dehydratase family 3 73 2.7E-11 T 22-04-2016 IPR001509 NAD-dependent epimerase/dehydratase, N-terminal domain GO:0003824|GO:0050662 SRM_RS04425 f3311222db625fa1b66210afd36c75ed 118 PANTHER PTHR10366 2 70 1.4E-23 T 22-04-2016 SRM_RS04425 f3311222db625fa1b66210afd36c75ed 118 Gene3D G3DSA:3.40.50.720 3 76 2.5E-16 T 22-04-2016 IPR016040 NAD(P)-binding domain SRM_RS09980 76471b48e973975e695f9e9f1e3d2631 71 SUPERFAMILY SSF50249 2 70 3.17E-23 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold SRM_RS09980 76471b48e973975e695f9e9f1e3d2631 71 Gene3D G3DSA:2.40.50.140 5 69 3.3E-27 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold SRM_RS09980 76471b48e973975e695f9e9f1e3d2631 71 PANTHER PTHR11544 1 71 2.9E-22 T 22-04-2016 SRM_RS09980 76471b48e973975e695f9e9f1e3d2631 71 PRINTS PR00050 Cold shock protein signature 7 22 1.0E-13 T 22-04-2016 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 SRM_RS09980 76471b48e973975e695f9e9f1e3d2631 71 PRINTS PR00050 Cold shock protein signature 43 61 1.0E-13 T 22-04-2016 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 SRM_RS09980 76471b48e973975e695f9e9f1e3d2631 71 PRINTS PR00050 Cold shock protein signature 28 37 1.0E-13 T 22-04-2016 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 SRM_RS09980 76471b48e973975e695f9e9f1e3d2631 71 SMART SM00357 6 70 1.2E-23 T 22-04-2016 IPR011129 Cold shock protein GO:0003676 SRM_RS09980 76471b48e973975e695f9e9f1e3d2631 71 Pfam PF00313 'Cold-shock' DNA-binding domain 6 69 9.0E-28 T 22-04-2016 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 SRM_RS09980 76471b48e973975e695f9e9f1e3d2631 71 PIRSF PIRSF002599 1 71 2.5E-23 T 22-04-2016 IPR012156 Cold shock, CspA GO:0003676 SRM_RS09980 76471b48e973975e695f9e9f1e3d2631 71 ProSitePatterns PS00352 'Cold-shock' domain signature. 18 37 - T 22-04-2016 IPR019844 Cold-shock conserved site SRM_RS06165 83303dca4fcf9c85c1ecec6f75c1cf6c 493 Gene3D G3DSA:2.40.160.50 326 479 1.3E-11 T 22-04-2016 SRM_RS06165 83303dca4fcf9c85c1ecec6f75c1cf6c 493 Pfam PF01103 Surface antigen 327 463 2.5E-11 T 22-04-2016 IPR000184 Bacterial surface antigen (D15) GO:0019867 SRM_RS05850 eff81330f21d7924c1a16bc1cb882954 551 SUPERFAMILY SSF50615 13 98 1.46E-22 T 22-04-2016 IPR004100 ATPase, F1 complex alpha/beta subunit, N-terminal domain GO:0015992|GO:0046034 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 SRM_RS05850 eff81330f21d7924c1a16bc1cb882954 551 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 154 396 1.4E-68 T 22-04-2016 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 SRM_RS05850 eff81330f21d7924c1a16bc1cb882954 551 TIGRFAM TIGR00962 atpA: ATP synthase F1, alpha subunit 6 529 5.1E-226 T 22-04-2016 IPR005294 ATPase, F1 complex, alpha subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 SRM_RS05850 eff81330f21d7924c1a16bc1cb882954 551 Hamap MF_01346 ATP synthase subunit alpha [atpA]. 4 533 47.56 T 22-04-2016 IPR005294 ATPase, F1 complex, alpha subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 SRM_RS05850 eff81330f21d7924c1a16bc1cb882954 551 PIRSF PIRSF039088 4 535 3.3E-237 T 22-04-2016 IPR005294 ATPase, F1 complex, alpha subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 SRM_RS05850 eff81330f21d7924c1a16bc1cb882954 551 Gene3D G3DSA:1.20.150.20 405 529 5.7E-50 T 22-04-2016 SRM_RS05850 eff81330f21d7924c1a16bc1cb882954 551 SUPERFAMILY SSF47917 405 529 8.11E-44 T 22-04-2016 IPR000793 ATPase, F1/V1/A1 complex, alpha/beta subunit, C-terminal GO:0015991|GO:0016820|GO:0033178 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 SRM_RS05850 eff81330f21d7924c1a16bc1cb882954 551 Gene3D G3DSA:2.40.30.20 6 97 2.1E-30 T 22-04-2016 IPR023366 ATP synthase subunit alpha-like domain KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 SRM_RS05850 eff81330f21d7924c1a16bc1cb882954 551 SUPERFAMILY SSF52540 100 402 1.31E-88 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SRM_RS05850 eff81330f21d7924c1a16bc1cb882954 551 Pfam PF00306 ATP synthase alpha/beta chain, C terminal domain 403 526 2.8E-47 T 22-04-2016 IPR000793 ATPase, F1/V1/A1 complex, alpha/beta subunit, C-terminal GO:0015991|GO:0016820|GO:0033178 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 SRM_RS05850 eff81330f21d7924c1a16bc1cb882954 551 Gene3D G3DSA:3.40.50.300 99 403 2.5E-111 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SRM_RS05850 eff81330f21d7924c1a16bc1cb882954 551 ProSitePatterns PS00152 ATP synthase alpha and beta subunits signature. 387 396 - T 22-04-2016 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 SRM_RS05850 eff81330f21d7924c1a16bc1cb882954 551 Pfam PF02874 ATP synthase alpha/beta family, beta-barrel domain 31 96 7.6E-16 T 22-04-2016 IPR004100 ATPase, F1 complex alpha/beta subunit, N-terminal domain GO:0015992|GO:0046034 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 SRM_RS06700 5b9c937b9893e7b941eaf6c6a139d1f9 302 PIRSF PIRSF001365 3 296 5.0E-89 T 22-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 SRM_RS06700 5b9c937b9893e7b941eaf6c6a139d1f9 302 ProSitePatterns PS00666 Dihydrodipicolinate synthase signature 2. 138 169 - T 22-04-2016 IPR020625 Schiff base-forming aldolase, active site GO:0008152|GO:0016829 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 SRM_RS06700 5b9c937b9893e7b941eaf6c6a139d1f9 302 PANTHER PTHR12128 4 282 1.4E-114 T 22-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 SRM_RS06700 5b9c937b9893e7b941eaf6c6a139d1f9 302 Pfam PF00701 Dihydrodipicolinate synthetase family 7 282 7.1E-85 T 22-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 SRM_RS06700 5b9c937b9893e7b941eaf6c6a139d1f9 302 SMART SM01130 6 293 8.1E-123 T 22-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 SRM_RS06700 5b9c937b9893e7b941eaf6c6a139d1f9 302 PRINTS PR00146 Dihydrodipicolinate synthase signature 108 124 1.0E-28 T 22-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 SRM_RS06700 5b9c937b9893e7b941eaf6c6a139d1f9 302 PRINTS PR00146 Dihydrodipicolinate synthase signature 133 150 1.0E-28 T 22-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 SRM_RS06700 5b9c937b9893e7b941eaf6c6a139d1f9 302 PRINTS PR00146 Dihydrodipicolinate synthase signature 76 94 1.0E-28 T 22-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 SRM_RS06700 5b9c937b9893e7b941eaf6c6a139d1f9 302 PRINTS PR00146 Dihydrodipicolinate synthase signature 40 61 1.0E-28 T 22-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 SRM_RS06700 5b9c937b9893e7b941eaf6c6a139d1f9 302 Gene3D G3DSA:3.20.20.70 5 283 2.6E-107 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 SRM_RS06700 5b9c937b9893e7b941eaf6c6a139d1f9 302 TIGRFAM TIGR00674 dapA: 4-hydroxy-tetrahydrodipicolinate synthase 10 282 1.5E-93 T 22-04-2016 IPR005263 4-hydroxy-tetrahydrodipicolinate synthase, DapA GO:0008840|GO:0009089 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 SRM_RS06700 5b9c937b9893e7b941eaf6c6a139d1f9 302 SUPERFAMILY SSF51569 4 282 1.47E-96 T 22-04-2016 SRM_RS06700 5b9c937b9893e7b941eaf6c6a139d1f9 302 PANTHER PTHR12128:SF34 4 282 1.4E-114 T 22-04-2016 SRM_RS06700 5b9c937b9893e7b941eaf6c6a139d1f9 302 Hamap MF_00418 4-hydroxy-tetrahydrodipicolinate synthase [dapA]. 6 292 59.317 T 22-04-2016 IPR005263 4-hydroxy-tetrahydrodipicolinate synthase, DapA GO:0008840|GO:0009089 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 SRM_RS06700 5b9c937b9893e7b941eaf6c6a139d1f9 302 ProSitePatterns PS00665 Dihydrodipicolinate synthase signature 1. 43 60 - T 22-04-2016 IPR020624 Schiff base-forming aldolase, conserved site GO:0008152|GO:0016829 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 SRM_RS01750 51bfbe8c49f408ce8280264f7b39a8e9 956 Gene3D G3DSA:2.60.40.1120 135 215 3.5E-14 T 22-04-2016 IPR014766 Carboxypeptidase, regulatory domain SRM_RS01750 51bfbe8c49f408ce8280264f7b39a8e9 956 SUPERFAMILY SSF56935 432 956 1.83E-30 T 22-04-2016 SRM_RS01750 51bfbe8c49f408ce8280264f7b39a8e9 956 SUPERFAMILY SSF56935 255 399 1.83E-30 T 22-04-2016 SRM_RS01750 51bfbe8c49f408ce8280264f7b39a8e9 956 SUPERFAMILY SSF49464 135 226 7.06E-15 T 22-04-2016 IPR008969 Carboxypeptidase-like, regulatory domain SRM_RS01750 51bfbe8c49f408ce8280264f7b39a8e9 956 SMART SM00965 74 125 4.0E-7 T 22-04-2016 IPR011662 Secretin/TonB, short N-terminal domain GO:0019867 SRM_RS01750 51bfbe8c49f408ce8280264f7b39a8e9 956 Gene3D G3DSA:2.40.170.20 436 955 3.1E-14 T 22-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 SRM_RS01750 51bfbe8c49f408ce8280264f7b39a8e9 956 Pfam PF13620 Carboxypeptidase regulatory-like domain 135 212 1.3E-13 T 22-04-2016 SRM_RS12680 802ef3c382a9055604cc01f35cf50076 216 Pfam PF04542 Sigma-70 region 2 52 117 1.0E-11 T 22-04-2016 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 SRM_RS12680 802ef3c382a9055604cc01f35cf50076 216 Gene3D G3DSA:1.10.1740.10 29 140 1.1E-23 T 22-04-2016 SRM_RS12680 802ef3c382a9055604cc01f35cf50076 216 Pfam PF08281 Sigma-70, region 4 151 201 1.8E-17 T 22-04-2016 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 SRM_RS12680 802ef3c382a9055604cc01f35cf50076 216 SUPERFAMILY SSF88659 119 209 5.61E-21 T 22-04-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 SRM_RS12680 802ef3c382a9055604cc01f35cf50076 216 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 47 205 1.7E-31 T 22-04-2016 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 SRM_RS12680 802ef3c382a9055604cc01f35cf50076 216 PANTHER PTHR30173:SF20 38 210 2.1E-45 T 22-04-2016 SRM_RS12680 802ef3c382a9055604cc01f35cf50076 216 Gene3D G3DSA:1.10.10.10 142 208 2.0E-22 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SRM_RS12680 802ef3c382a9055604cc01f35cf50076 216 PANTHER PTHR30173 38 210 2.1E-45 T 22-04-2016 SRM_RS12680 802ef3c382a9055604cc01f35cf50076 216 TIGRFAM TIGR02985 Sig70_bacteroi1: RNA polymerase sigma-70 factor, Bacteroides expansion family 1 47 205 1.2E-41 T 22-04-2016 IPR014327 RNA polymerase sigma-70, Bacteroidetes type SRM_RS12680 802ef3c382a9055604cc01f35cf50076 216 SUPERFAMILY SSF88946 29 135 2.35E-21 T 22-04-2016 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 SRM_RS14530 b88ae31c81d0a9b96dd06f2b07544c1e 532 Pfam PF08345 Flagellar M-ring protein C-terminal 297 383 5.2E-21 T 22-04-2016 IPR013556 Flagellar M-ring C-terminal SRM_RS14530 b88ae31c81d0a9b96dd06f2b07544c1e 532 Pfam PF08345 Flagellar M-ring protein C-terminal 249 298 3.7E-8 T 22-04-2016 IPR013556 Flagellar M-ring C-terminal SRM_RS14530 b88ae31c81d0a9b96dd06f2b07544c1e 532 PRINTS PR01009 Flagellar M-ring protein signature 262 280 2.4E-21 T 22-04-2016 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 SRM_RS14530 b88ae31c81d0a9b96dd06f2b07544c1e 532 PRINTS PR01009 Flagellar M-ring protein signature 149 163 2.4E-21 T 22-04-2016 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 SRM_RS14530 b88ae31c81d0a9b96dd06f2b07544c1e 532 PRINTS PR01009 Flagellar M-ring protein signature 191 209 2.4E-21 T 22-04-2016 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 SRM_RS14530 b88ae31c81d0a9b96dd06f2b07544c1e 532 PRINTS PR01009 Flagellar M-ring protein signature 117 135 2.4E-21 T 22-04-2016 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 SRM_RS14530 b88ae31c81d0a9b96dd06f2b07544c1e 532 Pfam PF01514 Secretory protein of YscJ/FliF family 27 215 6.4E-62 T 22-04-2016 IPR006182 Secretory protein YscJ/FliF SRM_RS14530 b88ae31c81d0a9b96dd06f2b07544c1e 532 TIGRFAM TIGR00206 fliF: flagellar M-ring protein FliF 7 300 4.5E-64 T 22-04-2016 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 SRM_RS14530 b88ae31c81d0a9b96dd06f2b07544c1e 532 PANTHER PTHR30046 1 434 5.2E-109 T 22-04-2016 SRM_RS14530 b88ae31c81d0a9b96dd06f2b07544c1e 532 PANTHER PTHR30046 452 531 5.2E-109 T 22-04-2016 SRM_RS14530 b88ae31c81d0a9b96dd06f2b07544c1e 532 PANTHER PTHR30046:SF0 1 434 5.2E-109 T 22-04-2016 SRM_RS14530 b88ae31c81d0a9b96dd06f2b07544c1e 532 PANTHER PTHR30046:SF0 452 531 5.2E-109 T 22-04-2016 SRM_RS00805 76f75b91ba29341704e43e25f3b49240 160 PANTHER PTHR11078 1 148 1.6E-38 T 22-04-2016 IPR011605 NusB antitermination factor GO:0006353 SRM_RS00805 76f75b91ba29341704e43e25f3b49240 160 Pfam PF01029 NusB family 6 130 8.2E-33 T 22-04-2016 IPR006027 NusB/RsmB/TIM44 GO:0003723|GO:0006355 SRM_RS00805 76f75b91ba29341704e43e25f3b49240 160 Gene3D G3DSA:1.10.940.10 1 130 2.2E-43 T 22-04-2016 IPR006027 NusB/RsmB/TIM44 GO:0003723|GO:0006355 SRM_RS00805 76f75b91ba29341704e43e25f3b49240 160 Hamap MF_00073 N utilization substance protein B homolog [nusB]. 2 135 19.881 T 22-04-2016 IPR011605 NusB antitermination factor GO:0006353 SRM_RS00805 76f75b91ba29341704e43e25f3b49240 160 TIGRFAM TIGR01951 nusB: transcription antitermination factor NusB 3 131 2.3E-36 T 22-04-2016 IPR011605 NusB antitermination factor GO:0006353 SRM_RS00805 76f75b91ba29341704e43e25f3b49240 160 SUPERFAMILY SSF48013 3 130 3.53E-33 T 22-04-2016 IPR006027 NusB/RsmB/TIM44 GO:0003723|GO:0006355 SRM_RS10470 f8c2269fc59057f5b18b483618fbe932 209 PIRSF PIRSF006707 8 201 9.6E-65 T 22-04-2016 IPR026282 DNA-binding protein, MJ1563 type SRM_RS10470 f8c2269fc59057f5b18b483618fbe932 209 Gene3D G3DSA:1.10.10.10 22 100 2.4E-19 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SRM_RS10470 f8c2269fc59057f5b18b483618fbe932 209 SUPERFAMILY SSF46785 23 138 2.34E-20 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SRM_RS10470 f8c2269fc59057f5b18b483618fbe932 209 PANTHER PTHR38465 7 193 6.7E-28 T 22-04-2016 SRM_RS09365 42cafbb61787488902f17b02cad803e8 370 SUPERFAMILY SSF51735 4 157 1.32E-38 T 22-04-2016 IPR016040 NAD(P)-binding domain SRM_RS09365 42cafbb61787488902f17b02cad803e8 370 Pfam PF02153 Prephenate dehydrogenase 22 278 2.9E-55 T 22-04-2016 IPR003099 Prephenate dehydrogenase GO:0004665|GO:0006571|GO:0008977|GO:0055114 KEGG: 00400+1.3.1.12|KEGG: 00401+1.3.1.12|MetaCyc: PWY-7303 SRM_RS09365 42cafbb61787488902f17b02cad803e8 370 PANTHER PTHR21363:SF0 1 360 2.0E-68 T 22-04-2016 SRM_RS09365 42cafbb61787488902f17b02cad803e8 370 SUPERFAMILY SSF48179 177 288 5.44E-31 T 22-04-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 SRM_RS09365 42cafbb61787488902f17b02cad803e8 370 PANTHER PTHR21363 1 360 2.0E-68 T 22-04-2016 SRM_RS09365 42cafbb61787488902f17b02cad803e8 370 Gene3D G3DSA:3.30.70.260 303 361 3.3E-5 T 22-04-2016 SRM_RS09365 42cafbb61787488902f17b02cad803e8 370 SUPERFAMILY SSF55021 302 361 9.99E-6 T 22-04-2016 SRM_RS09365 42cafbb61787488902f17b02cad803e8 370 Gene3D G3DSA:3.40.50.720 1 183 1.3E-34 T 22-04-2016 IPR016040 NAD(P)-binding domain SRM_RS06580 232dba282506fb95645388e61cb8dced 73 Hamap MF_00075 Translation initiation factor IF-1 [infA]. 1 72 27.005 T 22-04-2016 IPR004368 Translation initiation factor IF-1 GO:0003743|GO:0006413 SRM_RS06580 232dba282506fb95645388e61cb8dced 73 SUPERFAMILY SSF50249 1 71 2.94E-27 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold SRM_RS06580 232dba282506fb95645388e61cb8dced 73 TIGRFAM TIGR00008 infA: translation initiation factor IF-1 3 71 2.9E-36 T 22-04-2016 IPR004368 Translation initiation factor IF-1 GO:0003743|GO:0006413 SRM_RS06580 232dba282506fb95645388e61cb8dced 73 SMART SM00316 4 72 2.7E-4 T 22-04-2016 IPR022967 RNA-binding domain, S1 SRM_RS06580 232dba282506fb95645388e61cb8dced 73 PANTHER PTHR33370 1 73 3.6E-46 T 22-04-2016 SRM_RS06580 232dba282506fb95645388e61cb8dced 73 Gene3D G3DSA:2.40.50.140 1 72 1.2E-37 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold SRM_RS06580 232dba282506fb95645388e61cb8dced 73 Pfam PF01176 Translation initiation factor 1A / IF-1 8 70 1.8E-27 T 22-04-2016 IPR006196 RNA-binding domain, S1, IF1 type GO:0003723|GO:0003743|GO:0006413 SRM_RS15610 03a9971d5a60dbe4b0d6c04fcae153f2 501 SMART SM00388 263 329 1.2E-12 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SRM_RS15610 03a9971d5a60dbe4b0d6c04fcae153f2 501 SUPERFAMILY SSF55874 321 484 7.47E-36 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SRM_RS15610 03a9971d5a60dbe4b0d6c04fcae153f2 501 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 376 482 5.5E-21 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SRM_RS15610 03a9971d5a60dbe4b0d6c04fcae153f2 501 Pfam PF00672 HAMP domain 192 258 6.2E-10 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 SRM_RS15610 03a9971d5a60dbe4b0d6c04fcae153f2 501 SUPERFAMILY SSF47384 246 328 1.1E-15 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SRM_RS15610 03a9971d5a60dbe4b0d6c04fcae153f2 501 Gene3D G3DSA:3.30.565.10 332 486 1.0E-38 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SRM_RS15610 03a9971d5a60dbe4b0d6c04fcae153f2 501 SMART SM00387 373 484 4.2E-29 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SRM_RS15610 03a9971d5a60dbe4b0d6c04fcae153f2 501 Pfam PF00512 His Kinase A (phospho-acceptor) domain 264 328 3.1E-10 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SRM_RS15610 03a9971d5a60dbe4b0d6c04fcae153f2 501 SMART SM00304 208 262 7.4E-9 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 SRM_RS15610 03a9971d5a60dbe4b0d6c04fcae153f2 501 PANTHER PTHR24423 202 493 1.3E-66 T 22-04-2016 SRM_RS15610 03a9971d5a60dbe4b0d6c04fcae153f2 501 PANTHER PTHR24423 14 34 1.3E-66 T 22-04-2016 SRM_RS15610 03a9971d5a60dbe4b0d6c04fcae153f2 501 Gene3D G3DSA:1.10.287.130 255 325 2.0E-9 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SRM_RS15610 03a9971d5a60dbe4b0d6c04fcae153f2 501 PRINTS PR00344 Bacterial sensor protein C-terminal signature 410 424 7.6E-13 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SRM_RS15610 03a9971d5a60dbe4b0d6c04fcae153f2 501 PRINTS PR00344 Bacterial sensor protein C-terminal signature 444 462 7.6E-13 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SRM_RS15610 03a9971d5a60dbe4b0d6c04fcae153f2 501 PRINTS PR00344 Bacterial sensor protein C-terminal signature 468 481 7.6E-13 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SRM_RS08170 cbd34ebacbf2ae7494dc8dbb2c276017 141 PANTHER PTHR12735 10 140 2.1E-34 T 22-04-2016 SRM_RS08170 cbd34ebacbf2ae7494dc8dbb2c276017 141 Gene3D G3DSA:3.90.1010.10 4 140 8.6E-50 T 22-04-2016 SRM_RS08170 cbd34ebacbf2ae7494dc8dbb2c276017 141 Pfam PF02657 Fe-S metabolism associated domain 16 136 1.3E-43 T 22-04-2016 IPR003808 Fe-S metabolism associated domain, SufE-like UniPathway: UPA00266 SRM_RS08170 cbd34ebacbf2ae7494dc8dbb2c276017 141 PANTHER PTHR12735:SF11 10 140 2.1E-34 T 22-04-2016 SRM_RS08170 cbd34ebacbf2ae7494dc8dbb2c276017 141 SUPERFAMILY SSF82649 10 140 1.83E-39 T 22-04-2016 SRM_RS12040 2ed28a59600e57a3eeb6c880e664dcc6 560 SUPERFAMILY SSF54849 136 203 1.85E-22 T 22-04-2016 SRM_RS12040 2ed28a59600e57a3eeb6c880e664dcc6 560 Hamap MF_00600 60 kDa chaperonin [groL]. 1 556 40.599 T 22-04-2016 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 SRM_RS12040 2ed28a59600e57a3eeb6c880e664dcc6 560 ProSitePatterns PS00296 Chaperonins cpn60 signature. 404 415 - T 22-04-2016 IPR018370 Chaperonin Cpn60, conserved site GO:0005524|GO:0005737|GO:0006457 SRM_RS12040 2ed28a59600e57a3eeb6c880e664dcc6 560 SUPERFAMILY SSF52029 183 375 5.98E-84 T 22-04-2016 IPR027409 GroEL-like apical domain SRM_RS12040 2ed28a59600e57a3eeb6c880e664dcc6 560 TIGRFAM TIGR02348 GroEL: chaperonin GroL 2 525 1.0E-250 T 22-04-2016 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 SRM_RS12040 2ed28a59600e57a3eeb6c880e664dcc6 560 PANTHER PTHR11353 1 560 3.5E-230 T 22-04-2016 SRM_RS12040 2ed28a59600e57a3eeb6c880e664dcc6 560 SUPERFAMILY SSF48592 5 133 1.42E-72 T 22-04-2016 SRM_RS12040 2ed28a59600e57a3eeb6c880e664dcc6 560 SUPERFAMILY SSF48592 405 520 1.42E-72 T 22-04-2016 SRM_RS12040 2ed28a59600e57a3eeb6c880e664dcc6 560 PRINTS PR00298 60kDa chaperonin signature 267 290 3.6E-71 T 22-04-2016 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 SRM_RS12040 2ed28a59600e57a3eeb6c880e664dcc6 560 PRINTS PR00298 60kDa chaperonin signature 26 52 3.6E-71 T 22-04-2016 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 SRM_RS12040 2ed28a59600e57a3eeb6c880e664dcc6 560 PRINTS PR00298 60kDa chaperonin signature 82 109 3.6E-71 T 22-04-2016 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 SRM_RS12040 2ed28a59600e57a3eeb6c880e664dcc6 560 PRINTS PR00298 60kDa chaperonin signature 397 418 3.6E-71 T 22-04-2016 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 SRM_RS12040 2ed28a59600e57a3eeb6c880e664dcc6 560 PRINTS PR00298 60kDa chaperonin signature 349 374 3.6E-71 T 22-04-2016 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 SRM_RS12040 2ed28a59600e57a3eeb6c880e664dcc6 560 Pfam PF00118 TCP-1/cpn60 chaperonin family 23 522 2.8E-94 T 22-04-2016 IPR002423 Chaperonin Cpn60/TCP-1 family GO:0005524 SRM_RS12040 2ed28a59600e57a3eeb6c880e664dcc6 560 Gene3D G3DSA:1.10.560.10 366 517 5.2E-42 T 22-04-2016 IPR027413 GroEL-like equatorial domain SRM_RS12040 2ed28a59600e57a3eeb6c880e664dcc6 560 Gene3D G3DSA:1.10.560.10 3 187 8.7E-45 T 22-04-2016 IPR027413 GroEL-like equatorial domain SRM_RS12040 2ed28a59600e57a3eeb6c880e664dcc6 560 Gene3D G3DSA:3.50.7.10 188 365 1.3E-98 T 22-04-2016 IPR027409 GroEL-like apical domain SRM_RS02045 4e2556726c0dc75f2c81f1af3608c582 172 Pfam PF05685 Putative restriction endonuclease 31 154 1.6E-8 T 22-04-2016 IPR008538 Domain of unknown function DUF820 SRM_RS02045 4e2556726c0dc75f2c81f1af3608c582 172 Gene3D G3DSA:3.90.1570.10 28 148 7.5E-13 T 22-04-2016 IPR012296 Nuclease, putative, TT1808 SRM_RS02045 4e2556726c0dc75f2c81f1af3608c582 172 SUPERFAMILY SSF52980 25 168 3.81E-15 T 22-04-2016 IPR011335 Restriction endonuclease type II-like SRM_RS04415 d282c6fb9498510cfa632769b3c93b17 74 PANTHER PTHR34849:SF3 1 72 3.1E-18 T 22-04-2016 SRM_RS04415 d282c6fb9498510cfa632769b3c93b17 74 Gene3D G3DSA:1.10.10.10 6 68 4.8E-26 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SRM_RS04415 d282c6fb9498510cfa632769b3c93b17 74 SUPERFAMILY SSF46689 3 68 6.27E-22 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 SRM_RS04415 d282c6fb9498510cfa632769b3c93b17 74 Pfam PF04255 Protein of unknown function (DUF433) 7 62 5.5E-24 T 22-04-2016 IPR007367 Protein of unknown function DUF433 SRM_RS04415 d282c6fb9498510cfa632769b3c93b17 74 PANTHER PTHR34849 1 72 3.1E-18 T 22-04-2016 SRM_RS14215 74b7f45eb7b6aa78430b5b081dbbc7fb 416 SUPERFAMILY SSF51735 17 188 3.46E-18 T 22-04-2016 IPR016040 NAD(P)-binding domain SRM_RS14215 74b7f45eb7b6aa78430b5b081dbbc7fb 416 Pfam PF16653 Saccharopine dehydrogenase C-terminal domain 146 391 3.2E-29 T 22-04-2016 IPR032095 Saccharopine dehydrogenase, C-terminal SRM_RS14215 74b7f45eb7b6aa78430b5b081dbbc7fb 416 Gene3D G3DSA:3.40.50.720 17 192 5.6E-28 T 22-04-2016 IPR016040 NAD(P)-binding domain SRM_RS14215 74b7f45eb7b6aa78430b5b081dbbc7fb 416 SUPERFAMILY SSF55347 147 331 3.4E-30 T 22-04-2016 SRM_RS14215 74b7f45eb7b6aa78430b5b081dbbc7fb 416 Pfam PF03435 Saccharopine dehydrogenase NADP binding domain 19 142 9.4E-17 T 22-04-2016 IPR005097 Saccharopine dehydrogenase, NADP binding domain GO:0016491|GO:0055114 SRM_RS05105 10de6ce20a560211336cab2da7c134af 432 Hamap MF_00051 Serine hydroxymethyltransferase [glyA]. 3 428 51.623 T 22-04-2016 IPR001085 Serine hydroxymethyltransferase GO:0016740 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|UniPathway: UPA00193|UniPathway: UPA00288 SRM_RS05105 10de6ce20a560211336cab2da7c134af 432 Gene3D G3DSA:3.90.1150.10 296 429 4.0E-59 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 SRM_RS05105 10de6ce20a560211336cab2da7c134af 432 SUPERFAMILY SSF53383 2 428 1.43E-176 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase SRM_RS05105 10de6ce20a560211336cab2da7c134af 432 ProSitePatterns PS00096 Serine hydroxymethyltransferase pyridoxal-phosphate attachment site. 218 234 - T 22-04-2016 IPR019798 Serine hydroxymethyltransferase, pyridoxal phosphate binding site GO:0004372|GO:0006544|GO:0006563|GO:0030170 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|UniPathway: UPA00193|UniPathway: UPA00288 SRM_RS05105 10de6ce20a560211336cab2da7c134af 432 Gene3D G3DSA:3.40.640.10 33 295 1.7E-97 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 SRM_RS05105 10de6ce20a560211336cab2da7c134af 432 PIRSF PIRSF000412 1 430 2.2E-165 T 22-04-2016 IPR001085 Serine hydroxymethyltransferase GO:0016740 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|UniPathway: UPA00193|UniPathway: UPA00288 SRM_RS05105 10de6ce20a560211336cab2da7c134af 432 PANTHER PTHR11680 4 431 7.3E-247 T 22-04-2016 IPR001085 Serine hydroxymethyltransferase GO:0016740 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|UniPathway: UPA00193|UniPathway: UPA00288 SRM_RS05105 10de6ce20a560211336cab2da7c134af 432 Pfam PF00464 Serine hydroxymethyltransferase 5 397 5.6E-175 T 22-04-2016 IPR001085 Serine hydroxymethyltransferase GO:0016740 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|UniPathway: UPA00193|UniPathway: UPA00288 SRM_RS09260 a26023e395f702db64da8e20ffc3d71f 154 Pfam PF06803 Protein of unknown function (DUF1232) 94 127 1.6E-11 T 22-04-2016 IPR010652 Protein of unknown function DUF1232 UniPathway: UPA00143 SRM_RS05160 053f462e59c2f09e11d812492dcbc3b9 98 Pfam PF04977 Septum formation initiator 21 95 6.1E-15 T 22-04-2016 IPR007060 Septum formation initiator FtsL/DivIC GO:0007049 SRM_RS14325 e91b72b63032850c929aefb4aea39586 394 Pfam PF09587 Bacterial capsule synthesis protein PGA_cap 148 233 4.1E-15 T 22-04-2016 IPR019079 Capsule synthesis protein, CapA SRM_RS14325 e91b72b63032850c929aefb4aea39586 394 Pfam PF09587 Bacterial capsule synthesis protein PGA_cap 270 329 2.1E-9 T 22-04-2016 IPR019079 Capsule synthesis protein, CapA SRM_RS14325 e91b72b63032850c929aefb4aea39586 394 SUPERFAMILY SSF56300 128 388 3.48E-19 T 22-04-2016 IPR029052 Metallo-dependent phosphatase-like SRM_RS14325 e91b72b63032850c929aefb4aea39586 394 SMART SM00854 129 331 1.4E-37 T 22-04-2016 IPR019079 Capsule synthesis protein, CapA SRM_RS14325 e91b72b63032850c929aefb4aea39586 394 PANTHER PTHR33393 150 328 2.2E-13 T 22-04-2016 SRM_RS14325 e91b72b63032850c929aefb4aea39586 394 PANTHER PTHR33393:SF2 150 328 2.2E-13 T 22-04-2016 SRM_RS15170 ada708188a93e85b00caebbe7e3b2f42 825 Hamap MF_00983 Probable primosomal protein N' [priA]. 5 824 24.134 T 22-04-2016 IPR005259 Primosomal protein N' GO:0003677|GO:0004003|GO:0006260|GO:0032508 SRM_RS15170 ada708188a93e85b00caebbe7e3b2f42 825 Pfam PF00270 DEAD/DEAH box helicase 300 444 8.5E-12 T 22-04-2016 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 SRM_RS15170 ada708188a93e85b00caebbe7e3b2f42 825 Pfam PF00271 Helicase conserved C-terminal domain 615 682 6.3E-6 T 22-04-2016 IPR001650 Helicase, C-terminal SRM_RS15170 ada708188a93e85b00caebbe7e3b2f42 825 TIGRFAM TIGR00595 priA: primosomal protein N' 304 820 5.1E-179 T 22-04-2016 IPR005259 Primosomal protein N' GO:0003677|GO:0004003|GO:0006260|GO:0032508 SRM_RS15170 ada708188a93e85b00caebbe7e3b2f42 825 SMART SM00487 276 481 9.5E-18 T 22-04-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain SRM_RS15170 ada708188a93e85b00caebbe7e3b2f42 825 SUPERFAMILY SSF52540 590 750 4.35E-25 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SRM_RS15170 ada708188a93e85b00caebbe7e3b2f42 825 SUPERFAMILY SSF52540 303 353 4.35E-25 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SRM_RS15170 ada708188a93e85b00caebbe7e3b2f42 825 Gene3D G3DSA:3.40.50.300 279 465 7.4E-37 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SRM_RS15170 ada708188a93e85b00caebbe7e3b2f42 825 PANTHER PTHR30580 3 825 4.1E-242 T 22-04-2016 SRM_RS15170 ada708188a93e85b00caebbe7e3b2f42 825 SUPERFAMILY SSF52540 278 457 1.41E-38 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SRM_RS15170 ada708188a93e85b00caebbe7e3b2f42 825 Gene3D G3DSA:3.40.50.300 555 728 7.2E-27 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SRM_RS15170 ada708188a93e85b00caebbe7e3b2f42 825 SMART SM00490 587 683 6.8E-6 T 22-04-2016 IPR001650 Helicase, C-terminal SRM_RS08805 e31304ff3049af19caa9fd84b5501f26 459 TIGRFAM TIGR00505 ribA: GTP cyclohydrolase II 13 201 1.2E-75 T 22-04-2016 IPR000926 GTP cyclohydrolase II, RibA GO:0003935|GO:0009231 KEGG: 00740+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|UniPathway: UPA00275 SRM_RS08805 e31304ff3049af19caa9fd84b5501f26 459 Hamap MF_00179 GTP cyclohydrolase-2 [ribA]. 8 203 41.3 T 22-04-2016 IPR000926 GTP cyclohydrolase II, RibA GO:0003935|GO:0009231 KEGG: 00740+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|UniPathway: UPA00275 SRM_RS08805 e31304ff3049af19caa9fd84b5501f26 459 SUPERFAMILY SSF53597 234 448 8.43E-51 T 22-04-2016 IPR024072 Dihydrofolate reductase-like domain SRM_RS08805 e31304ff3049af19caa9fd84b5501f26 459 TIGRFAM TIGR00227 ribD_Cterm: riboflavin-specific deaminase C-terminal domain 235 450 1.1E-50 T 22-04-2016 IPR011549 Riboflavin-specific deaminase, C-terminal GO:0008703|GO:0009231|GO:0050661|GO:0055114 SRM_RS08805 e31304ff3049af19caa9fd84b5501f26 459 Gene3D G3DSA:3.40.430.10 230 450 5.8E-61 T 22-04-2016 IPR024072 Dihydrofolate reductase-like domain SRM_RS08805 e31304ff3049af19caa9fd84b5501f26 459 PANTHER PTHR21327 8 230 3.8E-111 T 22-04-2016 SRM_RS08805 e31304ff3049af19caa9fd84b5501f26 459 SUPERFAMILY SSF142695 10 178 1.12E-65 T 22-04-2016 IPR032677 GTP cyclohydrolase II KEGG: 00740+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|UniPathway: UPA00275 SRM_RS08805 e31304ff3049af19caa9fd84b5501f26 459 Pfam PF00925 GTP cyclohydrolase II 12 176 8.2E-71 T 22-04-2016 IPR032677 GTP cyclohydrolase II KEGG: 00740+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|UniPathway: UPA00275 SRM_RS08805 e31304ff3049af19caa9fd84b5501f26 459 Pfam PF01872 RibD C-terminal domain 236 447 3.4E-43 T 22-04-2016 IPR002734 Bacterial bifunctional deaminase-reductase, C-terminal GO:0008703|GO:0009231|GO:0055114 SRM_RS14420 8224c3685615e4a952bed8215faf3488 273 Pfam PF01618 MotA/TolQ/ExbB proton channel family 103 207 1.9E-18 T 22-04-2016 IPR002898 MotA/TolQ/ExbB proton channel GO:0006810|GO:0008565|GO:0016020 SRM_RS14420 8224c3685615e4a952bed8215faf3488 273 ProSitePatterns PS01307 Flagellar motor protein motA family signature. 184 201 - T 22-04-2016 IPR000540 Flagellar motor protein MotA, conserved site SRM_RS14420 8224c3685615e4a952bed8215faf3488 273 PANTHER PTHR30433 4 268 3.0E-74 T 22-04-2016 SRM_RS14420 8224c3685615e4a952bed8215faf3488 273 PANTHER PTHR30433:SF2 4 268 3.0E-74 T 22-04-2016 IPR022522 Flagellar motor stator, MotA SRM_RS01690 1fdb9b42dcab3a2eaca516b8665ab8fc 1241 Pfam PF01433 Peptidase family M1 887 1039 1.0E-8 T 22-04-2016 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 SRM_RS01690 1fdb9b42dcab3a2eaca516b8665ab8fc 1241 Gene3D G3DSA:1.10.390.10 993 1121 1.9E-11 T 22-04-2016 SRM_RS01690 1fdb9b42dcab3a2eaca516b8665ab8fc 1241 Pfam PF12730 ABC-2 family transporter protein 357 518 1.4E-6 T 22-04-2016 IPR032688 ABC-2 family transporter protein GO:0006810 SRM_RS01690 1fdb9b42dcab3a2eaca516b8665ab8fc 1241 SUPERFAMILY SSF55486 888 1114 3.81E-21 T 22-04-2016 SRM_RS02345 10a3e44a369ea76ca28e9ce041e6a6d2 154 Pfam PF14328 Domain of unknown function (DUF4385) 5 142 2.2E-57 T 22-04-2016 IPR025494 Protein of unknown function DUF4385 SRM_RS06825 6bd28cf24a227df0bffbf80292de78f3 430 Gene3D G3DSA:2.30.40.10 18 130 7.8E-21 T 22-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 SRM_RS06825 6bd28cf24a227df0bffbf80292de78f3 430 Pfam PF07969 Amidohydrolase family 291 403 3.6E-13 T 22-04-2016 IPR013108 Amidohydrolase 3 SRM_RS06825 6bd28cf24a227df0bffbf80292de78f3 430 PANTHER PTHR11271 28 429 8.7E-42 T 22-04-2016 SRM_RS06825 6bd28cf24a227df0bffbf80292de78f3 430 SUPERFAMILY SSF51556 80 369 1.28E-29 T 22-04-2016 IPR032466 Metal-dependent hydrolase SRM_RS06825 6bd28cf24a227df0bffbf80292de78f3 430 SUPERFAMILY SSF51338 368 405 4.84E-19 T 22-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 SRM_RS06825 6bd28cf24a227df0bffbf80292de78f3 430 SUPERFAMILY SSF51338 26 81 4.84E-19 T 22-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 SRM_RS06825 6bd28cf24a227df0bffbf80292de78f3 430 PANTHER PTHR11271:SF39 28 429 8.7E-42 T 22-04-2016 SRM_RS06825 6bd28cf24a227df0bffbf80292de78f3 430 Gene3D G3DSA:2.30.40.10 309 404 3.0E-25 T 22-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 SRM_RS00815 06b48c3fd4f961f763a1930d4e9e5ad8 364 Hamap MF_00944 Ribosome-binding ATPase YchF [ychF]. 2 364 42.886 T 22-04-2016 IPR004396 Ribosome-binding ATPase YchF/Obg-like ATPase 1 GO:0005525 SRM_RS00815 06b48c3fd4f961f763a1930d4e9e5ad8 364 Pfam PF06071 Protein of unknown function (DUF933) 280 363 1.4E-34 T 22-04-2016 IPR013029 Domain of unknown function DUF933 SRM_RS00815 06b48c3fd4f961f763a1930d4e9e5ad8 364 Gene3D G3DSA:3.10.20.30 269 364 2.7E-42 T 22-04-2016 IPR012675 Beta-grasp domain SRM_RS00815 06b48c3fd4f961f763a1930d4e9e5ad8 364 Pfam PF01926 50S ribosome-binding GTPase 5 115 5.9E-22 T 22-04-2016 IPR006073 GTP binding domain GO:0005525 SRM_RS00815 06b48c3fd4f961f763a1930d4e9e5ad8 364 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 87 105 1.1E-34 T 22-04-2016 IPR006073 GTP binding domain GO:0005525 SRM_RS00815 06b48c3fd4f961f763a1930d4e9e5ad8 364 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 70 85 1.1E-34 T 22-04-2016 IPR006073 GTP binding domain GO:0005525 SRM_RS00815 06b48c3fd4f961f763a1930d4e9e5ad8 364 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 26 44 1.1E-34 T 22-04-2016 IPR006073 GTP binding domain GO:0005525 SRM_RS00815 06b48c3fd4f961f763a1930d4e9e5ad8 364 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 5 25 1.1E-34 T 22-04-2016 IPR006073 GTP binding domain GO:0005525 SRM_RS00815 06b48c3fd4f961f763a1930d4e9e5ad8 364 PIRSF PIRSF006641 1 364 5.5E-144 T 22-04-2016 IPR004396 Ribosome-binding ATPase YchF/Obg-like ATPase 1 GO:0005525 SRM_RS00815 06b48c3fd4f961f763a1930d4e9e5ad8 364 PANTHER PTHR23305:SF12 1 364 1.2E-185 T 22-04-2016 SRM_RS00815 06b48c3fd4f961f763a1930d4e9e5ad8 364 PANTHER PTHR23305 1 364 1.2E-185 T 22-04-2016 SRM_RS00815 06b48c3fd4f961f763a1930d4e9e5ad8 364 TIGRFAM TIGR00092 TIGR00092: GTP-binding protein YchF 1 364 5.5E-139 T 22-04-2016 IPR004396 Ribosome-binding ATPase YchF/Obg-like ATPase 1 GO:0005525 SRM_RS00815 06b48c3fd4f961f763a1930d4e9e5ad8 364 Gene3D G3DSA:3.40.50.300 201 268 1.6E-46 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SRM_RS00815 06b48c3fd4f961f763a1930d4e9e5ad8 364 Gene3D G3DSA:3.40.50.300 4 130 1.6E-46 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SRM_RS00815 06b48c3fd4f961f763a1930d4e9e5ad8 364 Gene3D G3DSA:1.10.150.300 131 200 2.9E-25 T 22-04-2016 IPR023192 TGS-like domain SRM_RS00815 06b48c3fd4f961f763a1930d4e9e5ad8 364 SUPERFAMILY SSF81271 280 361 3.71E-30 T 22-04-2016 IPR012676 TGS-like KEGG: 00970+6.1.1.3 SRM_RS00815 06b48c3fd4f961f763a1930d4e9e5ad8 364 SUPERFAMILY SSF52540 3 301 6.37E-77 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SRM_RS01055 f8584812d377eff55e404478b41e42fe 286 SUPERFAMILY SSF53474 26 282 3.89E-46 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold SRM_RS01055 f8584812d377eff55e404478b41e42fe 286 PANTHER PTHR12277 16 282 7.3E-77 T 22-04-2016 SRM_RS01055 f8584812d377eff55e404478b41e42fe 286 Gene3D G3DSA:3.40.50.1820 40 281 2.7E-41 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold SRM_RS01055 f8584812d377eff55e404478b41e42fe 286 Pfam PF12146 Serine aminopeptidase, S33 81 184 1.1E-11 T 22-04-2016 IPR022742 Serine aminopeptidase, S33 SRM_RS02705 5f86cba535ce7023c911b5157adbb05a 167 SMART SM00387 43 155 9.5E-36 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SRM_RS02705 5f86cba535ce7023c911b5157adbb05a 167 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 44 153 7.6E-25 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SRM_RS02705 5f86cba535ce7023c911b5157adbb05a 167 PRINTS PR00344 Bacterial sensor protein C-terminal signature 98 108 3.4E-18 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SRM_RS02705 5f86cba535ce7023c911b5157adbb05a 167 PRINTS PR00344 Bacterial sensor protein C-terminal signature 139 152 3.4E-18 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SRM_RS02705 5f86cba535ce7023c911b5157adbb05a 167 PRINTS PR00344 Bacterial sensor protein C-terminal signature 80 94 3.4E-18 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SRM_RS02705 5f86cba535ce7023c911b5157adbb05a 167 PRINTS PR00344 Bacterial sensor protein C-terminal signature 115 133 3.4E-18 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SRM_RS02705 5f86cba535ce7023c911b5157adbb05a 167 SUPERFAMILY SSF55874 2 153 1.7E-40 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SRM_RS02705 5f86cba535ce7023c911b5157adbb05a 167 Gene3D G3DSA:3.30.565.10 2 154 3.2E-44 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SRM_RS02705 5f86cba535ce7023c911b5157adbb05a 167 PANTHER PTHR24423 1 152 3.2E-51 T 22-04-2016 SRM_RS02650 a1c0f5e4cd50570b2c58b4e69c4726e1 344 Pfam PF02470 MlaD protein 39 137 3.9E-13 T 22-04-2016 IPR003399 Mce/MlaD SRM_RS11625 4b0a3cc090d999d6f8f16ff0e850ef34 901 SUPERFAMILY SSF52374 355 586 3.9E-138 T 22-04-2016 SRM_RS11625 4b0a3cc090d999d6f8f16ff0e850ef34 901 SUPERFAMILY SSF52374 14 206 3.9E-138 T 22-04-2016 SRM_RS11625 4b0a3cc090d999d6f8f16ff0e850ef34 901 Gene3D G3DSA:3.40.50.620 17 207 2.1E-140 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold SRM_RS11625 4b0a3cc090d999d6f8f16ff0e850ef34 901 Gene3D G3DSA:3.40.50.620 355 575 2.1E-140 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold SRM_RS11625 4b0a3cc090d999d6f8f16ff0e850ef34 901 TIGRFAM TIGR00422 valS: valine--tRNA ligase 15 881 0.0 T 22-04-2016 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9|Reactome: REACT_71 SRM_RS11625 4b0a3cc090d999d6f8f16ff0e850ef34 901 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 56 67 - T 22-04-2016 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 SRM_RS11625 4b0a3cc090d999d6f8f16ff0e850ef34 901 PANTHER PTHR11946:SF5 830 897 0.0 T 22-04-2016 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9|Reactome: REACT_71 SRM_RS11625 4b0a3cc090d999d6f8f16ff0e850ef34 901 PANTHER PTHR11946:SF5 6 810 0.0 T 22-04-2016 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9|Reactome: REACT_71 SRM_RS11625 4b0a3cc090d999d6f8f16ff0e850ef34 901 SUPERFAMILY SSF46589 834 898 8.37E-14 T 22-04-2016 IPR010978 tRNA-binding arm GO:0000166 Reactome: REACT_71 SRM_RS11625 4b0a3cc090d999d6f8f16ff0e850ef34 901 SUPERFAMILY SSF50677 205 356 4.06E-59 T 22-04-2016 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 Reactome: REACT_71 SRM_RS11625 4b0a3cc090d999d6f8f16ff0e850ef34 901 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 27 576 6.5E-200 T 22-04-2016 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 SRM_RS11625 4b0a3cc090d999d6f8f16ff0e850ef34 901 Gene3D G3DSA:3.90.740.10 208 351 4.8E-49 T 22-04-2016 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 Reactome: REACT_71 SRM_RS11625 4b0a3cc090d999d6f8f16ff0e850ef34 901 Pfam PF08264 Anticodon-binding domain of tRNA 627 772 3.6E-35 T 22-04-2016 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding GO:0000166|GO:0006418 Reactome: REACT_71 SRM_RS11625 4b0a3cc090d999d6f8f16ff0e850ef34 901 PRINTS PR00986 Valyl-tRNA synthetase signature 245 262 6.2E-35 T 22-04-2016 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9|Reactome: REACT_71 SRM_RS11625 4b0a3cc090d999d6f8f16ff0e850ef34 901 PRINTS PR00986 Valyl-tRNA synthetase signature 458 479 6.2E-35 T 22-04-2016 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9|Reactome: REACT_71 SRM_RS11625 4b0a3cc090d999d6f8f16ff0e850ef34 901 PRINTS PR00986 Valyl-tRNA synthetase signature 360 373 6.2E-35 T 22-04-2016 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9|Reactome: REACT_71 SRM_RS11625 4b0a3cc090d999d6f8f16ff0e850ef34 901 PRINTS PR00986 Valyl-tRNA synthetase signature 49 60 6.2E-35 T 22-04-2016 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9|Reactome: REACT_71 SRM_RS11625 4b0a3cc090d999d6f8f16ff0e850ef34 901 PRINTS PR00986 Valyl-tRNA synthetase signature 489 507 6.2E-35 T 22-04-2016 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9|Reactome: REACT_71 SRM_RS11625 4b0a3cc090d999d6f8f16ff0e850ef34 901 SUPERFAMILY SSF47323 589 848 8.78E-51 T 22-04-2016 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 SRM_RS11625 4b0a3cc090d999d6f8f16ff0e850ef34 901 PANTHER PTHR11946 830 897 0.0 T 22-04-2016 SRM_RS11625 4b0a3cc090d999d6f8f16ff0e850ef34 901 PANTHER PTHR11946 6 810 0.0 T 22-04-2016 SRM_RS11625 4b0a3cc090d999d6f8f16ff0e850ef34 901 Pfam PF10458 Valyl tRNA synthetase tRNA binding arm 834 898 6.4E-16 T 22-04-2016 IPR019499 Valyl-tRNA synthetase, tRNA-binding arm GO:0000166|GO:0004832|GO:0005524|GO:0005737|GO:0006438 KEGG: 00970+6.1.1.9 SRM_RS11625 4b0a3cc090d999d6f8f16ff0e850ef34 901 Hamap MF_02004 Valine--tRNA ligase [valS]. 15 899 15.361 T 22-04-2016 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9|Reactome: REACT_71 SRM_RS11625 4b0a3cc090d999d6f8f16ff0e850ef34 901 Gene3D G3DSA:1.10.287.380 827 898 1.0E-13 T 22-04-2016 IPR019499 Valyl-tRNA synthetase, tRNA-binding arm GO:0000166|GO:0004832|GO:0005524|GO:0005737|GO:0006438 KEGG: 00970+6.1.1.9 SRM_RS11625 4b0a3cc090d999d6f8f16ff0e850ef34 901 Gene3D G3DSA:1.10.730.10 579 762 5.5E-50 T 22-04-2016 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 SRM_RS02065 b4ff7db3ca7e272c2c1a506f8d51998a 572 ProSitePatterns PS00296 Chaperonins cpn60 signature. 417 428 - T 22-04-2016 IPR018370 Chaperonin Cpn60, conserved site GO:0005524|GO:0005737|GO:0006457 SRM_RS02065 b4ff7db3ca7e272c2c1a506f8d51998a 572 PRINTS PR00298 60kDa chaperonin signature 362 387 1.8E-70 T 22-04-2016 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 SRM_RS02065 b4ff7db3ca7e272c2c1a506f8d51998a 572 PRINTS PR00298 60kDa chaperonin signature 280 303 1.8E-70 T 22-04-2016 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 SRM_RS02065 b4ff7db3ca7e272c2c1a506f8d51998a 572 PRINTS PR00298 60kDa chaperonin signature 39 65 1.8E-70 T 22-04-2016 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 SRM_RS02065 b4ff7db3ca7e272c2c1a506f8d51998a 572 PRINTS PR00298 60kDa chaperonin signature 410 431 1.8E-70 T 22-04-2016 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 SRM_RS02065 b4ff7db3ca7e272c2c1a506f8d51998a 572 PRINTS PR00298 60kDa chaperonin signature 95 122 1.8E-70 T 22-04-2016 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 SRM_RS02065 b4ff7db3ca7e272c2c1a506f8d51998a 572 SUPERFAMILY SSF52029 196 388 1.94E-83 T 22-04-2016 IPR027409 GroEL-like apical domain SRM_RS02065 b4ff7db3ca7e272c2c1a506f8d51998a 572 Gene3D G3DSA:3.50.7.10 201 378 3.7E-98 T 22-04-2016 IPR027409 GroEL-like apical domain SRM_RS02065 b4ff7db3ca7e272c2c1a506f8d51998a 572 PANTHER PTHR11353 15 572 8.3E-229 T 22-04-2016 SRM_RS02065 b4ff7db3ca7e272c2c1a506f8d51998a 572 Hamap MF_00600 60 kDa chaperonin [groL]. 14 571 40.44 T 22-04-2016 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 SRM_RS02065 b4ff7db3ca7e272c2c1a506f8d51998a 572 TIGRFAM TIGR02348 GroEL: chaperonin GroL 15 538 1.3E-249 T 22-04-2016 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 SRM_RS02065 b4ff7db3ca7e272c2c1a506f8d51998a 572 Pfam PF00118 TCP-1/cpn60 chaperonin family 36 535 1.7E-94 T 22-04-2016 IPR002423 Chaperonin Cpn60/TCP-1 family GO:0005524 SRM_RS02065 b4ff7db3ca7e272c2c1a506f8d51998a 572 Gene3D G3DSA:1.10.560.10 379 530 5.4E-42 T 22-04-2016 IPR027413 GroEL-like equatorial domain SRM_RS02065 b4ff7db3ca7e272c2c1a506f8d51998a 572 Gene3D G3DSA:1.10.560.10 15 200 1.4E-44 T 22-04-2016 IPR027413 GroEL-like equatorial domain SRM_RS02065 b4ff7db3ca7e272c2c1a506f8d51998a 572 SUPERFAMILY SSF48592 418 533 1.3E-72 T 22-04-2016 SRM_RS02065 b4ff7db3ca7e272c2c1a506f8d51998a 572 SUPERFAMILY SSF48592 19 146 1.3E-72 T 22-04-2016 SRM_RS02065 b4ff7db3ca7e272c2c1a506f8d51998a 572 SUPERFAMILY SSF54849 149 216 5.26E-22 T 22-04-2016 SRM_RS05290 0542b6a46480c4276d61d9355c8c2dd5 610 Gene3D G3DSA:2.40.50.100 142 234 9.9E-28 T 22-04-2016 SRM_RS05290 0542b6a46480c4276d61d9355c8c2dd5 610 Gene3D G3DSA:2.40.50.100 2 96 1.2E-29 T 22-04-2016 SRM_RS05290 0542b6a46480c4276d61d9355c8c2dd5 610 Gene3D G3DSA:3.30.559.10 373 603 8.3E-80 T 22-04-2016 IPR023213 Chloramphenicol acetyltransferase-like domain SRM_RS05290 0542b6a46480c4276d61d9355c8c2dd5 610 ProSitePatterns PS00189 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 28 57 - T 22-04-2016 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site SRM_RS05290 0542b6a46480c4276d61d9355c8c2dd5 610 ProSitePatterns PS00189 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 168 197 - T 22-04-2016 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site SRM_RS05290 0542b6a46480c4276d61d9355c8c2dd5 610 SUPERFAMILY SSF51230 144 233 8.9E-24 T 22-04-2016 IPR011053 Single hybrid motif SRM_RS05290 0542b6a46480c4276d61d9355c8c2dd5 610 SUPERFAMILY SSF51230 3 95 2.62E-26 T 22-04-2016 IPR011053 Single hybrid motif SRM_RS05290 0542b6a46480c4276d61d9355c8c2dd5 610 TIGRFAM TIGR02927 SucB_Actino: 2-oxoglutarate dehydrogenase, E2 component, dihydrolipoamide succinyltransferase 4 609 7.1E-163 T 22-04-2016 IPR014276 2-oxoglutarate dehydrogenase, E2 component KEGG: 00010+2.3.1.12|KEGG: 00020+2.3.1.12|KEGG: 00620+2.3.1.12 SRM_RS05290 0542b6a46480c4276d61d9355c8c2dd5 610 Pfam PF00364 Biotin-requiring enzyme 5 77 3.0E-21 T 22-04-2016 IPR000089 Biotin/lipoyl attachment SRM_RS05290 0542b6a46480c4276d61d9355c8c2dd5 610 Pfam PF00364 Biotin-requiring enzyme 145 216 4.4E-16 T 22-04-2016 IPR000089 Biotin/lipoyl attachment SRM_RS05290 0542b6a46480c4276d61d9355c8c2dd5 610 PANTHER PTHR23151 142 345 3.0E-156 T 22-04-2016 SRM_RS05290 0542b6a46480c4276d61d9355c8c2dd5 610 PANTHER PTHR23151 24 115 3.0E-156 T 22-04-2016 SRM_RS05290 0542b6a46480c4276d61d9355c8c2dd5 610 PANTHER PTHR23151 374 601 3.0E-156 T 22-04-2016 SRM_RS05290 0542b6a46480c4276d61d9355c8c2dd5 610 SUPERFAMILY SSF52777 374 602 1.82E-79 T 22-04-2016 SRM_RS05290 0542b6a46480c4276d61d9355c8c2dd5 610 Pfam PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) 375 603 8.0E-77 T 22-04-2016 IPR001078 2-oxoacid dehydrogenase acyltransferase, catalytic domain GO:0008152|GO:0016746 SRM_RS05290 0542b6a46480c4276d61d9355c8c2dd5 610 Pfam PF02817 e3 binding domain 283 320 5.8E-12 T 22-04-2016 IPR004167 E3-binding domain GO:0008152|GO:0016746 SRM_RS05290 0542b6a46480c4276d61d9355c8c2dd5 610 SUPERFAMILY SSF47005 277 324 8.37E-9 T 22-04-2016 IPR004167 E3-binding domain GO:0008152|GO:0016746 SRM_RS05290 0542b6a46480c4276d61d9355c8c2dd5 610 Gene3D G3DSA:4.10.320.10 280 331 1.5E-15 T 22-04-2016 IPR004167 E3-binding domain GO:0008152|GO:0016746 SRM_RS05565 6f4e6c7b86f0fdd0478d5515fe20b3ec 276 Gene3D G3DSA:3.40.50.1360 36 270 1.7E-69 T 22-04-2016 SRM_RS05565 6f4e6c7b86f0fdd0478d5515fe20b3ec 276 TIGRFAM TIGR01198 pgl: 6-phosphogluconolactonase 40 271 1.1E-63 T 22-04-2016 IPR005900 6-phosphogluconolactonase, DevB-type GO:0005975|GO:0006098|GO:0017057 KEGG: 00030+3.1.1.31|UniPathway: UPA00115 SRM_RS05565 6f4e6c7b86f0fdd0478d5515fe20b3ec 276 Pfam PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase 41 264 4.4E-69 T 22-04-2016 IPR006148 Glucosamine/galactosamine-6-phosphate isomerase GO:0005975 KEGG: 00520+3.5.99.6|MetaCyc: PWY-5514|MetaCyc: PWY-6855|MetaCyc: PWY-6906 SRM_RS05565 6f4e6c7b86f0fdd0478d5515fe20b3ec 276 PANTHER PTHR11054 35 270 7.5E-71 T 22-04-2016 SRM_RS05565 6f4e6c7b86f0fdd0478d5515fe20b3ec 276 SUPERFAMILY SSF100950 36 271 4.81E-63 T 22-04-2016 SRM_RS03550 2df0b97b5d32f66a8b180ca8847dbb68 223 TIGRFAM TIGR00235 udk: uridine kinase 12 213 6.1E-81 T 22-04-2016 IPR000764 Uridine kinase-like KEGG: 00240+2.7.1.48|KEGG: 00983+2.7.1.48|MetaCyc: PWY-7193|UniPathway: UPA00574|UniPathway: UPA00579 SRM_RS03550 2df0b97b5d32f66a8b180ca8847dbb68 223 Hamap MF_00551 Uridine kinase [udk]. 10 214 38.193 T 22-04-2016 IPR026008 Uridine kinase GO:0004849|GO:0005524|GO:0016773 KEGG: 00240+2.7.1.48|KEGG: 00983+2.7.1.48|MetaCyc: PWY-7193|UniPathway: UPA00574|UniPathway: UPA00579 SRM_RS03550 2df0b97b5d32f66a8b180ca8847dbb68 223 Gene3D G3DSA:3.40.50.300 13 213 6.5E-67 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SRM_RS03550 2df0b97b5d32f66a8b180ca8847dbb68 223 PANTHER PTHR10285 11 213 1.7E-88 T 22-04-2016 SRM_RS03550 2df0b97b5d32f66a8b180ca8847dbb68 223 Pfam PF00485 Phosphoribulokinase / Uridine kinase family 15 200 1.1E-44 T 22-04-2016 IPR006083 Phosphoribulokinase/uridine kinase GO:0005524|GO:0008152|GO:0016301 SRM_RS03550 2df0b97b5d32f66a8b180ca8847dbb68 223 PRINTS PR00988 Uridine kinase signature 158 169 8.8E-35 T 22-04-2016 IPR000764 Uridine kinase-like KEGG: 00240+2.7.1.48|KEGG: 00983+2.7.1.48|MetaCyc: PWY-7193|UniPathway: UPA00574|UniPathway: UPA00579 SRM_RS03550 2df0b97b5d32f66a8b180ca8847dbb68 223 PRINTS PR00988 Uridine kinase signature 144 154 8.8E-35 T 22-04-2016 IPR000764 Uridine kinase-like KEGG: 00240+2.7.1.48|KEGG: 00983+2.7.1.48|MetaCyc: PWY-7193|UniPathway: UPA00574|UniPathway: UPA00579 SRM_RS03550 2df0b97b5d32f66a8b180ca8847dbb68 223 PRINTS PR00988 Uridine kinase signature 88 103 8.8E-35 T 22-04-2016 IPR000764 Uridine kinase-like KEGG: 00240+2.7.1.48|KEGG: 00983+2.7.1.48|MetaCyc: PWY-7193|UniPathway: UPA00574|UniPathway: UPA00579 SRM_RS03550 2df0b97b5d32f66a8b180ca8847dbb68 223 PRINTS PR00988 Uridine kinase signature 180 193 8.8E-35 T 22-04-2016 IPR000764 Uridine kinase-like KEGG: 00240+2.7.1.48|KEGG: 00983+2.7.1.48|MetaCyc: PWY-7193|UniPathway: UPA00574|UniPathway: UPA00579 SRM_RS03550 2df0b97b5d32f66a8b180ca8847dbb68 223 PRINTS PR00988 Uridine kinase signature 13 30 8.8E-35 T 22-04-2016 IPR000764 Uridine kinase-like KEGG: 00240+2.7.1.48|KEGG: 00983+2.7.1.48|MetaCyc: PWY-7193|UniPathway: UPA00574|UniPathway: UPA00579 SRM_RS03550 2df0b97b5d32f66a8b180ca8847dbb68 223 PRINTS PR00988 Uridine kinase signature 43 54 8.8E-35 T 22-04-2016 IPR000764 Uridine kinase-like KEGG: 00240+2.7.1.48|KEGG: 00983+2.7.1.48|MetaCyc: PWY-7193|UniPathway: UPA00574|UniPathway: UPA00579 SRM_RS03550 2df0b97b5d32f66a8b180ca8847dbb68 223 SMART SM00382 12 163 0.0055 T 22-04-2016 IPR003593 AAA+ ATPase domain SRM_RS03550 2df0b97b5d32f66a8b180ca8847dbb68 223 SUPERFAMILY SSF52540 11 205 4.99E-46 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SRM_RS15300 a7206879376a47f4683e389df455f9ba 291 Gene3D G3DSA:3.60.20.10 1 280 9.2E-47 T 22-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal SRM_RS15300 a7206879376a47f4683e389df455f9ba 291 PANTHER PTHR11907 1 178 9.0E-27 T 22-04-2016 SRM_RS15300 a7206879376a47f4683e389df455f9ba 291 PANTHER PTHR11907 207 274 9.0E-27 T 22-04-2016 SRM_RS15300 a7206879376a47f4683e389df455f9ba 291 Pfam PF13522 Glutamine amidotransferase domain 74 156 6.1E-14 T 22-04-2016 SRM_RS15300 a7206879376a47f4683e389df455f9ba 291 SUPERFAMILY SSF56235 39 281 7.29E-25 T 22-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal SRM_RS11270 089fae1a52a2eaca9ff47078ae924cba 444 PANTHER PTHR22912 23 330 5.3E-22 T 22-04-2016 SRM_RS11270 089fae1a52a2eaca9ff47078ae924cba 444 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 303 325 5.4E-5 T 22-04-2016 SRM_RS11270 089fae1a52a2eaca9ff47078ae924cba 444 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 39 58 5.4E-5 T 22-04-2016 SRM_RS11270 089fae1a52a2eaca9ff47078ae924cba 444 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 179 197 5.4E-5 T 22-04-2016 SRM_RS11270 089fae1a52a2eaca9ff47078ae924cba 444 SUPERFAMILY SSF51905 33 325 6.92E-26 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SRM_RS11270 089fae1a52a2eaca9ff47078ae924cba 444 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 38 329 1.4E-32 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SRM_RS11270 089fae1a52a2eaca9ff47078ae924cba 444 Gene3D G3DSA:3.50.50.60 135 343 6.9E-25 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SRM_RS11270 089fae1a52a2eaca9ff47078ae924cba 444 Gene3D G3DSA:3.50.50.60 38 134 1.6E-16 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SRM_RS07890 7a7e01c06a81cb02c6b24d55397445e4 156 Pfam PF13588 Type I restriction enzyme R protein N terminus (HSDR_N) 35 144 2.7E-36 T 22-04-2016 IPR029464 Type I restriction enzyme R protein, N-terminal domain SRM_RS11305 8a73cfabfe009d52c152e155cb4d2ee9 62 Pfam PF11127 Protein of unknown function (DUF2892) 6 56 1.8E-10 T 22-04-2016 IPR021309 Protein of unknown function DUF2892 SRM_RS05540 cad9126c2f88eaa68ef86513bcdc4a3d 273 Gene3D G3DSA:1.25.40.10 44 258 2.1E-12 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 SRM_RS05540 cad9126c2f88eaa68ef86513bcdc4a3d 273 PANTHER PTHR16056:SF3 43 273 1.7E-37 T 22-04-2016 SRM_RS05540 cad9126c2f88eaa68ef86513bcdc4a3d 273 PANTHER PTHR16056 43 273 1.7E-37 T 22-04-2016 SRM_RS05540 cad9126c2f88eaa68ef86513bcdc4a3d 273 SUPERFAMILY SSF48452 56 251 3.25E-10 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 SRM_RS02545 fecd23451b5b5762374a36dc8fbddfc7 504 PANTHER PTHR10422 33 455 1.0E-29 T 22-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 SRM_RS02545 fecd23451b5b5762374a36dc8fbddfc7 504 SUPERFAMILY SSF81442 31 469 9.55E-76 T 22-04-2016 IPR023616 Cytochrome c oxidase, subunit I domain GO:0004129|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 SRM_RS02545 fecd23451b5b5762374a36dc8fbddfc7 504 PANTHER PTHR10422:SF21 33 455 1.0E-29 T 22-04-2016 SRM_RS02545 fecd23451b5b5762374a36dc8fbddfc7 504 Pfam PF00115 Cytochrome C and Quinol oxidase polypeptide I 33 444 9.0E-68 T 22-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 SRM_RS02545 fecd23451b5b5762374a36dc8fbddfc7 504 Gene3D G3DSA:1.20.210.10 25 464 1.9E-33 T 22-04-2016 IPR023616 Cytochrome c oxidase, subunit I domain GO:0004129|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 SRM_RS05600 ae1c8ff51db5ae934198b27898c99ae6 658 Gene3D G3DSA:2.40.170.20 182 655 1.2E-64 T 22-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 SRM_RS05600 ae1c8ff51db5ae934198b27898c99ae6 658 PANTHER PTHR32552 49 655 3.5E-37 T 22-04-2016 SRM_RS05600 ae1c8ff51db5ae934198b27898c99ae6 658 Gene3D G3DSA:2.170.130.10 46 178 3.4E-26 T 22-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 SRM_RS05600 ae1c8ff51db5ae934198b27898c99ae6 658 SUPERFAMILY SSF56935 46 655 9.77E-90 T 22-04-2016 SRM_RS05600 ae1c8ff51db5ae934198b27898c99ae6 658 Pfam PF00593 TonB dependent receptor 408 653 2.5E-25 T 22-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 SRM_RS05600 ae1c8ff51db5ae934198b27898c99ae6 658 Pfam PF07715 TonB-dependent Receptor Plug Domain 67 168 9.7E-22 T 22-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 SRM_RS07820 95843a7705bd0e094a5976d7133505bf 212 Pfam PF13649 Methyltransferase domain 46 138 5.6E-15 T 22-04-2016 SRM_RS07820 95843a7705bd0e094a5976d7133505bf 212 PANTHER PTHR10108:SF838 14 147 4.3E-19 T 22-04-2016 SRM_RS07820 95843a7705bd0e094a5976d7133505bf 212 PANTHER PTHR10108 14 147 4.3E-19 T 22-04-2016 SRM_RS07820 95843a7705bd0e094a5976d7133505bf 212 Gene3D G3DSA:3.40.50.150 27 184 7.9E-25 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SRM_RS07820 95843a7705bd0e094a5976d7133505bf 212 SUPERFAMILY SSF53335 10 183 1.31E-29 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SRM_RS15545 c4be49aed1a0a6fe7cfee3b20e377ef3 186 Gene3D G3DSA:3.40.30.10 26 184 2.0E-44 T 22-04-2016 IPR012336 Thioredoxin-like fold SRM_RS15545 c4be49aed1a0a6fe7cfee3b20e377ef3 186 SUPERFAMILY SSF52833 45 182 2.55E-37 T 22-04-2016 IPR012336 Thioredoxin-like fold SRM_RS15545 c4be49aed1a0a6fe7cfee3b20e377ef3 186 PANTHER PTHR10681 49 169 1.6E-29 T 22-04-2016 SRM_RS15545 c4be49aed1a0a6fe7cfee3b20e377ef3 186 ProSitePatterns PS00194 Thioredoxin family active site. 75 93 - T 22-04-2016 IPR017937 Thioredoxin, conserved site GO:0045454 SRM_RS15545 c4be49aed1a0a6fe7cfee3b20e377ef3 186 Pfam PF00578 AhpC/TSA family 48 163 5.1E-23 T 22-04-2016 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15 SRM_RS15545 c4be49aed1a0a6fe7cfee3b20e377ef3 186 PANTHER PTHR10681:SF125 49 169 1.6E-29 T 22-04-2016 SRM_RS12485 a73514d4c3727a9323583804ae11a297 322 Pfam PF15461 Beta-carotene 15,15'-dioxygenase 44 310 2.5E-69 T 22-04-2016 IPR022270 Beta-carotene 15,15'-monooxygenase, Brp/Blh family GO:0016702|GO:0055114 KEGG: 00830+1.13.11.63|MetaCyc: PWY-6857 SRM_RS12485 a73514d4c3727a9323583804ae11a297 322 TIGRFAM TIGR03753 blh_monoox: beta-carotene 15,15'-monooxygenase, Brp/Blh family 41 307 3.5E-65 T 22-04-2016 IPR022270 Beta-carotene 15,15'-monooxygenase, Brp/Blh family GO:0016702|GO:0055114 KEGG: 00830+1.13.11.63|MetaCyc: PWY-6857 SRM_RS10925 d426a07ae49af6aeb0f69c0c883e33c3 475 PANTHER PTHR11271 8 446 3.1E-49 T 22-04-2016 SRM_RS10925 d426a07ae49af6aeb0f69c0c883e33c3 475 SUPERFAMILY SSF51556 92 386 5.52E-27 T 22-04-2016 IPR032466 Metal-dependent hydrolase SRM_RS10925 d426a07ae49af6aeb0f69c0c883e33c3 475 SUPERFAMILY SSF51338 385 420 1.03E-24 T 22-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 SRM_RS10925 d426a07ae49af6aeb0f69c0c883e33c3 475 SUPERFAMILY SSF51338 27 93 1.03E-24 T 22-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 SRM_RS10925 d426a07ae49af6aeb0f69c0c883e33c3 475 Pfam PF01979 Amidohydrolase family 328 414 2.2E-13 T 22-04-2016 IPR006680 Amidohydrolase-related GO:0016787 SRM_RS10925 d426a07ae49af6aeb0f69c0c883e33c3 475 Gene3D G3DSA:2.30.40.10 32 142 2.5E-27 T 22-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 SRM_RS10925 d426a07ae49af6aeb0f69c0c883e33c3 475 Gene3D G3DSA:2.30.40.10 324 420 5.3E-21 T 22-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 SRM_RS10925 d426a07ae49af6aeb0f69c0c883e33c3 475 PANTHER PTHR11271:SF39 8 446 3.1E-49 T 22-04-2016 SRM_RS10725 0abb69019d2561b09e25b3d6079255ca 89 ProSitePatterns PS00369 PTS HPR domain histidine phosphorylation site signature. 13 20 - T 22-04-2016 IPR001020 Phosphotransferase system, HPr histidine phosphorylation site SRM_RS10725 0abb69019d2561b09e25b3d6079255ca 89 Pfam PF00381 PTS HPr component phosphorylation site 3 82 3.5E-29 T 22-04-2016 IPR000032 Phosphocarrier HPr protein-like SRM_RS10725 0abb69019d2561b09e25b3d6079255ca 89 PRINTS PR00107 Phosphocarrier protein signature 38 53 6.8E-18 T 22-04-2016 IPR000032 Phosphocarrier HPr protein-like SRM_RS10725 0abb69019d2561b09e25b3d6079255ca 89 PRINTS PR00107 Phosphocarrier protein signature 13 29 6.8E-18 T 22-04-2016 IPR000032 Phosphocarrier HPr protein-like SRM_RS10725 0abb69019d2561b09e25b3d6079255ca 89 PRINTS PR00107 Phosphocarrier protein signature 53 70 6.8E-18 T 22-04-2016 IPR000032 Phosphocarrier HPr protein-like SRM_RS10725 0abb69019d2561b09e25b3d6079255ca 89 PANTHER PTHR33705 1 89 8.4E-36 T 22-04-2016 SRM_RS10725 0abb69019d2561b09e25b3d6079255ca 89 SUPERFAMILY SSF55594 2 88 6.02E-29 T 22-04-2016 IPR000032 Phosphocarrier HPr protein-like SRM_RS10725 0abb69019d2561b09e25b3d6079255ca 89 Gene3D G3DSA:3.30.1340.10 1 88 1.2E-33 T 22-04-2016 IPR000032 Phosphocarrier HPr protein-like SRM_RS10725 0abb69019d2561b09e25b3d6079255ca 89 TIGRFAM TIGR01003 PTS_HPr_family: phosphocarrier, HPr family 1 82 7.9E-31 T 22-04-2016 IPR000032 Phosphocarrier HPr protein-like SRM_RS10725 0abb69019d2561b09e25b3d6079255ca 89 PANTHER PTHR33705:SF2 1 89 8.4E-36 T 22-04-2016 SRM_RS06695 8fb1e2a563aa4a8a65efc16fef6eab31 155 TIGRFAM TIGR03426 shape_MreD: rod shape-determining protein MreD 8 146 1.5E-11 T 22-04-2016 IPR007227 Cell shape-determining protein MreD GO:0008360|GO:0016021 SRM_RS06695 8fb1e2a563aa4a8a65efc16fef6eab31 155 Pfam PF04093 rod shape-determining protein MreD 27 121 1.6E-6 T 22-04-2016 IPR007227 Cell shape-determining protein MreD GO:0008360|GO:0016021 SRM_RS15350 f9d88e84e82ba8665e129d53d2fd6e10 542 Pfam PF00474 Sodium:solute symporter family 42 447 3.5E-18 T 22-04-2016 IPR001734 Sodium/solute symporter GO:0005215|GO:0006810|GO:0016020|GO:0055085 SRM_RS15350 f9d88e84e82ba8665e129d53d2fd6e10 542 PANTHER PTHR11819 3 508 7.7E-22 T 22-04-2016 IPR001734 Sodium/solute symporter GO:0005215|GO:0006810|GO:0016020|GO:0055085 SRM_RS07075 b5147d3f34389184665093b6116c7043 339 SUPERFAMILY SSF51735 4 273 2.89E-67 T 22-04-2016 IPR016040 NAD(P)-binding domain SRM_RS07075 b5147d3f34389184665093b6116c7043 339 SUPERFAMILY SSF51735 302 338 2.89E-67 T 22-04-2016 IPR016040 NAD(P)-binding domain SRM_RS07075 b5147d3f34389184665093b6116c7043 339 Gene3D G3DSA:3.40.50.720 8 330 9.4E-60 T 22-04-2016 IPR016040 NAD(P)-binding domain SRM_RS07075 b5147d3f34389184665093b6116c7043 339 Pfam PF01370 NAD dependent epimerase/dehydratase family 10 237 4.9E-31 T 22-04-2016 IPR001509 NAD-dependent epimerase/dehydratase, N-terminal domain GO:0003824|GO:0050662 SRM_RS07075 b5147d3f34389184665093b6116c7043 339 PANTHER PTHR10366 293 339 6.8E-70 T 22-04-2016 SRM_RS07075 b5147d3f34389184665093b6116c7043 339 PANTHER PTHR10366 8 268 6.8E-70 T 22-04-2016 SRM_RS14825 08f2c96d0007169dd74dcff8db3edd2f 189 PANTHER PTHR23091:SF275 15 186 2.3E-32 T 22-04-2016 SRM_RS14825 08f2c96d0007169dd74dcff8db3edd2f 189 Gene3D G3DSA:3.40.630.30 52 185 6.2E-39 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase SRM_RS14825 08f2c96d0007169dd74dcff8db3edd2f 189 PANTHER PTHR23091 15 186 2.3E-32 T 22-04-2016 SRM_RS14825 08f2c96d0007169dd74dcff8db3edd2f 189 SUPERFAMILY SSF55729 46 188 5.57E-34 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase SRM_RS14825 08f2c96d0007169dd74dcff8db3edd2f 189 Pfam PF13673 Acetyltransferase (GNAT) domain 85 185 1.4E-15 T 22-04-2016 IPR000182 GNAT domain GO:0008080 SRM_RS11820 255f5eed15c6063e0c0b8ced22256889 243 PANTHER PTHR30456 1 243 5.9E-100 T 22-04-2016 SRM_RS11820 255f5eed15c6063e0c0b8ced22256889 243 PANTHER PTHR30456:SF0 1 243 5.9E-100 T 22-04-2016 SRM_RS11820 255f5eed15c6063e0c0b8ced22256889 243 Gene3D G3DSA:3.20.20.70 2 241 1.1E-89 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 SRM_RS11820 255f5eed15c6063e0c0b8ced22256889 243 Hamap MF_00279 Pyridoxine 5'-phosphate synthase [pdxJ]. 1 243 101.47 T 22-04-2016 IPR004569 Pyridoxal phosphate (active vitamin B6) biosynthesis PdxJ GO:0005737|GO:0008615|GO:0033856 KEGG: 00750+2.6.99.2|UniPathway: UPA00244 SRM_RS11820 255f5eed15c6063e0c0b8ced22256889 243 Pfam PF03740 Pyridoxal phosphate biosynthesis protein PdxJ 4 237 1.6E-86 T 22-04-2016 IPR004569 Pyridoxal phosphate (active vitamin B6) biosynthesis PdxJ GO:0005737|GO:0008615|GO:0033856 KEGG: 00750+2.6.99.2|UniPathway: UPA00244 SRM_RS11820 255f5eed15c6063e0c0b8ced22256889 243 SUPERFAMILY SSF63892 2 240 4.84E-82 T 22-04-2016 IPR004569 Pyridoxal phosphate (active vitamin B6) biosynthesis PdxJ GO:0005737|GO:0008615|GO:0033856 KEGG: 00750+2.6.99.2|UniPathway: UPA00244 SRM_RS11820 255f5eed15c6063e0c0b8ced22256889 243 TIGRFAM TIGR00559 pdxJ: pyridoxine 5'-phosphate synthase 4 238 2.2E-74 T 22-04-2016 IPR004569 Pyridoxal phosphate (active vitamin B6) biosynthesis PdxJ GO:0005737|GO:0008615|GO:0033856 KEGG: 00750+2.6.99.2|UniPathway: UPA00244 SRM_RS05470 90a6d3cacd773952d7c8e122a0421479 853 Pfam PF00593 TonB dependent receptor 570 851 2.2E-26 T 22-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 SRM_RS05470 90a6d3cacd773952d7c8e122a0421479 853 Gene3D G3DSA:2.60.40.1120 31 115 1.6E-17 T 22-04-2016 IPR014766 Carboxypeptidase, regulatory domain SRM_RS05470 90a6d3cacd773952d7c8e122a0421479 853 SUPERFAMILY SSF49452 27 108 5.89E-16 T 22-04-2016 IPR013784 Carbohydrate-binding-like fold GO:0030246 SRM_RS05470 90a6d3cacd773952d7c8e122a0421479 853 SUPERFAMILY SSF56935 436 853 2.88E-88 T 22-04-2016 SRM_RS05470 90a6d3cacd773952d7c8e122a0421479 853 SUPERFAMILY SSF56935 126 391 2.88E-88 T 22-04-2016 SRM_RS05470 90a6d3cacd773952d7c8e122a0421479 853 Gene3D G3DSA:2.170.130.10 131 241 3.5E-20 T 22-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 SRM_RS05470 90a6d3cacd773952d7c8e122a0421479 853 Pfam PF07715 TonB-dependent Receptor Plug Domain 130 239 8.4E-14 T 22-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 SRM_RS05470 90a6d3cacd773952d7c8e122a0421479 853 PANTHER PTHR32552 107 853 1.7E-34 T 22-04-2016 SRM_RS05470 90a6d3cacd773952d7c8e122a0421479 853 Gene3D G3DSA:2.40.170.20 242 853 6.0E-77 T 22-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 SRM_RS05470 90a6d3cacd773952d7c8e122a0421479 853 Pfam PF13715 CarboxypepD_reg-like domain 31 116 1.8E-17 T 22-04-2016 SRM_RS01195 9126a15adc52a57c146745f8163a4e66 1016 PRINTS PR00702 Acriflavin resistance protein family signature 357 378 3.6E-20 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 SRM_RS01195 9126a15adc52a57c146745f8163a4e66 1016 PRINTS PR00702 Acriflavin resistance protein family signature 10 34 3.6E-20 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 SRM_RS01195 9126a15adc52a57c146745f8163a4e66 1016 PRINTS PR00702 Acriflavin resistance protein family signature 38 56 3.6E-20 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 SRM_RS01195 9126a15adc52a57c146745f8163a4e66 1016 PRINTS PR00702 Acriflavin resistance protein family signature 463 486 3.6E-20 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 SRM_RS01195 9126a15adc52a57c146745f8163a4e66 1016 PRINTS PR00702 Acriflavin resistance protein family signature 385 409 3.6E-20 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 SRM_RS01195 9126a15adc52a57c146745f8163a4e66 1016 SUPERFAMILY SSF82866 790 1007 8.37E-41 T 22-04-2016 SRM_RS01195 9126a15adc52a57c146745f8163a4e66 1016 SUPERFAMILY SSF82693 40 134 7.46E-18 T 22-04-2016 SRM_RS01195 9126a15adc52a57c146745f8163a4e66 1016 SUPERFAMILY SSF82714 185 266 9.55E-15 T 22-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains SRM_RS01195 9126a15adc52a57c146745f8163a4e66 1016 Gene3D G3DSA:3.30.70.1430 40 140 8.0E-24 T 22-04-2016 SRM_RS01195 9126a15adc52a57c146745f8163a4e66 1016 SUPERFAMILY SSF82866 293 489 8.89E-34 T 22-04-2016 SRM_RS01195 9126a15adc52a57c146745f8163a4e66 1016 PANTHER PTHR32063 1 1010 0.0 T 22-04-2016 SRM_RS01195 9126a15adc52a57c146745f8163a4e66 1016 SUPERFAMILY SSF82693 555 654 6.98E-7 T 22-04-2016 SRM_RS01195 9126a15adc52a57c146745f8163a4e66 1016 Gene3D G3DSA:1.10.3850.10 799 1006 1.5E-50 T 22-04-2016 SRM_RS01195 9126a15adc52a57c146745f8163a4e66 1016 Gene3D G3DSA:3.30.70.1430 556 640 5.8E-6 T 22-04-2016 SRM_RS01195 9126a15adc52a57c146745f8163a4e66 1016 Gene3D G3DSA:1.20.1640.10 289 495 1.9E-42 T 22-04-2016 SRM_RS01195 9126a15adc52a57c146745f8163a4e66 1016 Pfam PF00873 AcrB/AcrD/AcrF family 4 1005 7.3E-162 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 SRM_RS01195 9126a15adc52a57c146745f8163a4e66 1016 Gene3D G3DSA:3.30.2090.10 185 266 8.4E-14 T 22-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains SRM_RS01195 9126a15adc52a57c146745f8163a4e66 1016 Gene3D G3DSA:3.30.2090.10 711 787 3.8E-8 T 22-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains SRM_RS01195 9126a15adc52a57c146745f8163a4e66 1016 SUPERFAMILY SSF82693 269 321 4.71E-20 T 22-04-2016 SRM_RS01195 9126a15adc52a57c146745f8163a4e66 1016 SUPERFAMILY SSF82693 136 182 4.71E-20 T 22-04-2016 SRM_RS01195 9126a15adc52a57c146745f8163a4e66 1016 SUPERFAMILY SSF82714 711 787 3.53E-9 T 22-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains SRM_RS01195 9126a15adc52a57c146745f8163a4e66 1016 PANTHER PTHR32063:SF18 1 1010 0.0 T 22-04-2016 SRM_RS12345 21889fdbd8e7e7bb3aae51530a6b75d7 128 SUPERFAMILY SSF46767 26 108 4.45E-21 T 22-04-2016 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 SRM_RS12345 21889fdbd8e7e7bb3aae51530a6b75d7 128 Pfam PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain 27 107 1.2E-23 T 22-04-2016 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 SRM_RS12345 21889fdbd8e7e7bb3aae51530a6b75d7 128 PANTHER PTHR10815 16 126 1.1E-32 T 22-04-2016 SRM_RS12345 21889fdbd8e7e7bb3aae51530a6b75d7 128 Gene3D G3DSA:1.10.10.10 25 109 1.6E-22 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SRM_RS12345 21889fdbd8e7e7bb3aae51530a6b75d7 128 ProSitePatterns PS00374 Methylated-DNA--protein-cysteine methyltransferase active site. 74 80 - T 22-04-2016 IPR001497 Methylated-DNA-[protein]-cysteine S-methyltransferase, active site GO:0003908|GO:0006281 SRM_RS12345 21889fdbd8e7e7bb3aae51530a6b75d7 128 TIGRFAM TIGR00589 ogt: methylated-DNA--[protein]-cysteine S-methyltransferase 27 88 9.0E-14 T 22-04-2016 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 SRM_RS12345 21889fdbd8e7e7bb3aae51530a6b75d7 128 PANTHER PTHR10815:SF2 16 126 1.1E-32 T 22-04-2016 SRM_RS04570 6081b075bddc9c17145cef42929453dc 514 PANTHER PTHR11895 372 514 4.3E-214 T 22-04-2016 IPR000120 Amidase GO:0016884 KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 SRM_RS04570 6081b075bddc9c17145cef42929453dc 514 PANTHER PTHR11895 5 337 4.3E-214 T 22-04-2016 IPR000120 Amidase GO:0016884 KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 SRM_RS04570 6081b075bddc9c17145cef42929453dc 514 Gene3D G3DSA:3.90.1300.10 5 329 2.5E-186 T 22-04-2016 IPR023631 Amidase signature domain KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 SRM_RS04570 6081b075bddc9c17145cef42929453dc 514 Gene3D G3DSA:3.90.1300.10 371 513 2.5E-186 T 22-04-2016 IPR023631 Amidase signature domain KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 SRM_RS04570 6081b075bddc9c17145cef42929453dc 514 Hamap MF_00120 Glutamyl-tRNA(Gln) amidotransferase subunit A [gatA]. 9 514 97.052 T 22-04-2016 IPR004412 Glutamyl-tRNA(Gln) amidotransferase A subunit GO:0006412 KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 SRM_RS04570 6081b075bddc9c17145cef42929453dc 514 PANTHER PTHR11895:SF7 372 514 4.3E-214 T 22-04-2016 SRM_RS04570 6081b075bddc9c17145cef42929453dc 514 PANTHER PTHR11895:SF7 5 337 4.3E-214 T 22-04-2016 SRM_RS04570 6081b075bddc9c17145cef42929453dc 514 SUPERFAMILY SSF75304 386 512 3.93E-138 T 22-04-2016 IPR023631 Amidase signature domain KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 SRM_RS04570 6081b075bddc9c17145cef42929453dc 514 SUPERFAMILY SSF75304 5 326 3.93E-138 T 22-04-2016 IPR023631 Amidase signature domain KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 SRM_RS04570 6081b075bddc9c17145cef42929453dc 514 Pfam PF01425 Amidase 23 356 1.1E-118 T 22-04-2016 IPR023631 Amidase signature domain KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 SRM_RS04570 6081b075bddc9c17145cef42929453dc 514 Pfam PF01425 Amidase 355 506 6.4E-40 T 22-04-2016 IPR023631 Amidase signature domain KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 SRM_RS04570 6081b075bddc9c17145cef42929453dc 514 ProSitePatterns PS00571 Amidases signature. 149 180 - T 22-04-2016 IPR020556 Amidase, conserved site KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 SRM_RS08460 d5aaae8aa3a6989c277c0081fe3c9a57 169 PANTHER PTHR33269:SF1 6 167 5.4E-43 T 22-04-2016 SRM_RS08460 d5aaae8aa3a6989c277c0081fe3c9a57 169 PANTHER PTHR33269 6 167 5.4E-43 T 22-04-2016 SRM_RS08460 d5aaae8aa3a6989c277c0081fe3c9a57 169 Pfam PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 18 163 1.9E-34 T 22-04-2016 IPR001457 NADH:ubiquinone/plastoquinone oxidoreductase, chain 6 GO:0008137|GO:0055114 SRM_RS10595 0ea1b70bbb129adaba9ed93d76c9875d 480 SUPERFAMILY SSF50156 107 201 1.24E-12 T 22-04-2016 IPR001478 PDZ domain GO:0005515 SRM_RS10595 0ea1b70bbb129adaba9ed93d76c9875d 480 TIGRFAM TIGR00054 TIGR00054: RIP metalloprotease RseP 12 480 1.1E-73 T 22-04-2016 IPR004387 Peptidase M50, putative membrane-associated zinc metallopeptidase GO:0004222|GO:0006508|GO:0016021 SRM_RS10595 0ea1b70bbb129adaba9ed93d76c9875d 480 Gene3D G3DSA:2.30.42.10 102 201 4.8E-18 T 22-04-2016 IPR001478 PDZ domain GO:0005515 SRM_RS10595 0ea1b70bbb129adaba9ed93d76c9875d 480 SUPERFAMILY SSF50156 212 284 1.97E-9 T 22-04-2016 IPR001478 PDZ domain GO:0005515 SRM_RS10595 0ea1b70bbb129adaba9ed93d76c9875d 480 PANTHER PTHR22939:SF78 227 281 1.1E-44 T 22-04-2016 SRM_RS10595 0ea1b70bbb129adaba9ed93d76c9875d 480 PANTHER PTHR22939:SF78 316 480 1.1E-44 T 22-04-2016 SRM_RS10595 0ea1b70bbb129adaba9ed93d76c9875d 480 Pfam PF02163 Peptidase family M50 14 467 1.1E-70 T 22-04-2016 IPR008915 Peptidase M50 GO:0004222|GO:0006508 SRM_RS10595 0ea1b70bbb129adaba9ed93d76c9875d 480 PANTHER PTHR22939 227 281 1.1E-44 T 22-04-2016 SRM_RS10595 0ea1b70bbb129adaba9ed93d76c9875d 480 PANTHER PTHR22939 316 480 1.1E-44 T 22-04-2016 SRM_RS10595 0ea1b70bbb129adaba9ed93d76c9875d 480 SMART SM00228 116 195 4.5E-4 T 22-04-2016 IPR001478 PDZ domain GO:0005515 SRM_RS10595 0ea1b70bbb129adaba9ed93d76c9875d 480 SMART SM00228 218 283 0.033 T 22-04-2016 IPR001478 PDZ domain GO:0005515 SRM_RS10595 0ea1b70bbb129adaba9ed93d76c9875d 480 Gene3D G3DSA:2.30.42.10 220 282 1.4E-8 T 22-04-2016 IPR001478 PDZ domain GO:0005515 SRM_RS02375 4d792a920c15221b25a75b837181b96b 48 Pfam PF09360 Iron-binding zinc finger CDGSH type 12 40 5.5E-11 T 22-04-2016 IPR018967 Iron sulphur-containing domain, CDGSH-type GO:0043231|GO:0051537 SRM_RS02375 4d792a920c15221b25a75b837181b96b 48 SMART SM00704 6 46 2.0E-6 T 22-04-2016 IPR018967 Iron sulphur-containing domain, CDGSH-type GO:0043231|GO:0051537 SRM_RS01620 df6cfabf263d9ede7375f475ca8d7f63 611 PANTHER PTHR32089 244 573 7.6E-107 T 22-04-2016 SRM_RS01620 df6cfabf263d9ede7375f475ca8d7f63 611 SMART SM00304 497 543 98.0 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 SRM_RS01620 df6cfabf263d9ede7375f475ca8d7f63 611 SMART SM00304 236 288 7.4E-9 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 SRM_RS01620 df6cfabf263d9ede7375f475ca8d7f63 611 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 358 569 1.9E-49 T 22-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 SRM_RS01620 df6cfabf263d9ede7375f475ca8d7f63 611 SMART SM00283 303 570 1.8E-78 T 22-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 SRM_RS01620 df6cfabf263d9ede7375f475ca8d7f63 611 Pfam PF00672 HAMP domain 239 284 8.0E-7 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 SRM_RS01620 df6cfabf263d9ede7375f475ca8d7f63 611 Gene3D G3DSA:1.10.287.950 329 540 9.9E-56 T 22-04-2016 SRM_RS01620 df6cfabf263d9ede7375f475ca8d7f63 611 Gene3D G3DSA:1.10.287.950 222 250 4.8E-4 T 22-04-2016 SRM_RS01620 df6cfabf263d9ede7375f475ca8d7f63 611 Gene3D G3DSA:1.10.287.950 282 328 4.8E-4 T 22-04-2016 SRM_RS01620 df6cfabf263d9ede7375f475ca8d7f63 611 SUPERFAMILY SSF58104 256 571 7.72E-75 T 22-04-2016 SRM_RS08585 b1eef4cc9b49f2f09b52c4ce7f6cf5d1 288 Gene3D G3DSA:1.10.3720.10 2 272 1.1E-45 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 SRM_RS08585 b1eef4cc9b49f2f09b52c4ce7f6cf5d1 288 PANTHER PTHR30193:SF6 1 288 2.8E-69 T 22-04-2016 SRM_RS08585 b1eef4cc9b49f2f09b52c4ce7f6cf5d1 288 SUPERFAMILY SSF161098 46 271 2.88E-49 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 SRM_RS08585 b1eef4cc9b49f2f09b52c4ce7f6cf5d1 288 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 77 280 2.2E-21 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 SRM_RS08585 b1eef4cc9b49f2f09b52c4ce7f6cf5d1 288 PANTHER PTHR30193 1 288 2.8E-69 T 22-04-2016 SRM_RS07460 c0a005bf56a0c06401e8eb0bd62fca6d 578 SUPERFAMILY SSF63411 384 570 1.91E-35 T 22-04-2016 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 SRM_RS07460 c0a005bf56a0c06401e8eb0bd62fca6d 578 PANTHER PTHR11851:SF136 104 172 5.3E-109 T 22-04-2016 SRM_RS07460 c0a005bf56a0c06401e8eb0bd62fca6d 578 PANTHER PTHR11851:SF136 229 569 5.3E-109 T 22-04-2016 SRM_RS07460 c0a005bf56a0c06401e8eb0bd62fca6d 578 Pfam PF05193 Peptidase M16 inactive domain 322 498 4.5E-33 T 22-04-2016 IPR007863 Peptidase M16, C-terminal SRM_RS07460 c0a005bf56a0c06401e8eb0bd62fca6d 578 Gene3D G3DSA:3.30.830.10 391 563 3.7E-28 T 22-04-2016 IPR011237 Peptidase M16 domain GO:0046872 SRM_RS07460 c0a005bf56a0c06401e8eb0bd62fca6d 578 PANTHER PTHR11851 104 172 5.3E-109 T 22-04-2016 SRM_RS07460 c0a005bf56a0c06401e8eb0bd62fca6d 578 Gene3D G3DSA:3.30.830.10 102 163 2.3E-52 T 22-04-2016 IPR011237 Peptidase M16 domain GO:0046872 SRM_RS07460 c0a005bf56a0c06401e8eb0bd62fca6d 578 Gene3D G3DSA:3.30.830.10 218 379 2.3E-52 T 22-04-2016 IPR011237 Peptidase M16 domain GO:0046872 SRM_RS07460 c0a005bf56a0c06401e8eb0bd62fca6d 578 PANTHER PTHR11851 229 569 5.3E-109 T 22-04-2016 SRM_RS07460 c0a005bf56a0c06401e8eb0bd62fca6d 578 SUPERFAMILY SSF63411 101 163 8.69E-48 T 22-04-2016 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 SRM_RS07460 c0a005bf56a0c06401e8eb0bd62fca6d 578 SUPERFAMILY SSF63411 218 373 8.69E-48 T 22-04-2016 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 SRM_RS07460 c0a005bf56a0c06401e8eb0bd62fca6d 578 Pfam PF00675 Insulinase (Peptidase family M16) 117 172 3.4E-9 T 22-04-2016 IPR011765 Peptidase M16, N-terminal SRM_RS07460 c0a005bf56a0c06401e8eb0bd62fca6d 578 Pfam PF00675 Insulinase (Peptidase family M16) 217 314 2.1E-8 T 22-04-2016 IPR011765 Peptidase M16, N-terminal SRM_RS08880 9590c7ac8169d753879af8ff9fcd6e3b 192 PANTHER PTHR35276:SF1 7 191 1.4E-42 T 22-04-2016 SRM_RS08880 9590c7ac8169d753879af8ff9fcd6e3b 192 Gene3D G3DSA:3.40.50.150 10 181 1.2E-18 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SRM_RS08880 9590c7ac8169d753879af8ff9fcd6e3b 192 PANTHER PTHR35276 7 191 1.4E-42 T 22-04-2016 SRM_RS08880 9590c7ac8169d753879af8ff9fcd6e3b 192 SUPERFAMILY SSF53335 12 158 3.58E-21 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SRM_RS08880 9590c7ac8169d753879af8ff9fcd6e3b 192 Pfam PF06962 Putative rRNA methylase 48 188 6.3E-48 T 22-04-2016 IPR010719 Putative rRNA methylase KEGG: 00253+2.1.1.-|KEGG: 00270+2.1.1.-|KEGG: 00332+2.1.1.-|KEGG: 00340+2.1.1.-|KEGG: 00350+2.1.1.-|KEGG: 00360+2.1.1.-|KEGG: 00380+2.1.1.-|KEGG: 00450+2.1.1.-|KEGG: 00522+2.1.1.-|KEGG: 00523+2.1.1.-|KEGG: 00624+2.1.1.-|KEGG: 00627+2.1.1.-|KEGG: 00860+2.1.1.-|KEGG: 00940+2.1.1.-|KEGG: 00941+2.1.1.-|KEGG: 00942+2.1.1.-|KEGG: 00945+2.1.1.-|KEGG: 00950+2.1.1.-|KEGG: 00981+2.1.1.- SRM_RS04980 a9a3ded554b441e4bf969346efe6b02a 288 Gene3D G3DSA:1.25.40.10 82 277 3.6E-14 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 SRM_RS04980 a9a3ded554b441e4bf969346efe6b02a 288 Pfam PF07719 Tetratricopeptide repeat 239 272 3.3E-6 T 22-04-2016 IPR013105 Tetratricopeptide repeat 2 SRM_RS04980 a9a3ded554b441e4bf969346efe6b02a 288 SUPERFAMILY SSF48452 127 274 8.35E-13 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 SRM_RS02660 bf0c3a0e8afd6b863087c0dd3b9b5631 371 Gene3D G3DSA:3.30.750.24 1 95 4.5E-5 T 22-04-2016 IPR002645 STAS domain SRM_RS02660 bf0c3a0e8afd6b863087c0dd3b9b5631 371 Pfam PF02405 Permease MlaE 158 363 8.7E-65 T 22-04-2016 IPR030802 ABC transporter permease MalE GO:0006810|GO:0043190 SRM_RS02660 bf0c3a0e8afd6b863087c0dd3b9b5631 371 PANTHER PTHR30188 33 362 1.9E-71 T 22-04-2016 IPR030802 ABC transporter permease MalE GO:0006810|GO:0043190 SRM_RS02660 bf0c3a0e8afd6b863087c0dd3b9b5631 371 SUPERFAMILY SSF52091 1 96 1.63E-5 T 22-04-2016 IPR002645 STAS domain SRM_RS02660 bf0c3a0e8afd6b863087c0dd3b9b5631 371 PANTHER PTHR30188:SF3 33 362 1.9E-71 T 22-04-2016 SRM_RS12325 ff2a6dd78e1894d68ecff211b4ccb721 110 SUPERFAMILY SSF46767 8 91 8.11E-22 T 22-04-2016 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 SRM_RS12325 ff2a6dd78e1894d68ecff211b4ccb721 110 Pfam PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain 10 90 8.6E-25 T 22-04-2016 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 SRM_RS12325 ff2a6dd78e1894d68ecff211b4ccb721 110 TIGRFAM TIGR00589 ogt: methylated-DNA--[protein]-cysteine S-methyltransferase 9 71 4.0E-15 T 22-04-2016 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 SRM_RS12325 ff2a6dd78e1894d68ecff211b4ccb721 110 ProSitePatterns PS00374 Methylated-DNA--protein-cysteine methyltransferase active site. 57 63 - T 22-04-2016 IPR001497 Methylated-DNA-[protein]-cysteine S-methyltransferase, active site GO:0003908|GO:0006281 SRM_RS12325 ff2a6dd78e1894d68ecff211b4ccb721 110 Gene3D G3DSA:1.10.10.10 9 92 3.6E-23 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SRM_RS12325 ff2a6dd78e1894d68ecff211b4ccb721 110 PANTHER PTHR10815:SF2 8 110 1.8E-32 T 22-04-2016 SRM_RS12325 ff2a6dd78e1894d68ecff211b4ccb721 110 PANTHER PTHR10815 8 110 1.8E-32 T 22-04-2016 SRM_RS12935 871316fa2d6c8921ae5b7604fc5474c1 397 TIGRFAM TIGR00326 eubact_ribD: riboflavin biosynthesis protein RibD 28 390 6.1E-92 T 22-04-2016 IPR004794 Riboflavin biosynthesis protein RibD GO:0008835|GO:0009231|GO:0055114 KEGG: 00040+1.1.1.19|KEGG: 00053+1.1.1.19|KEGG: 00740+3.5.4.26+1.1.1.193|MetaCyc: PWY-5525|UniPathway: UPA00275|UniPathway: UPA00275 SRM_RS12935 871316fa2d6c8921ae5b7604fc5474c1 397 PANTHER PTHR11079:SF10 27 251 5.5E-53 T 22-04-2016 SRM_RS12935 871316fa2d6c8921ae5b7604fc5474c1 397 PIRSF PIRSF006769 20 397 1.4E-136 T 22-04-2016 IPR004794 Riboflavin biosynthesis protein RibD GO:0008835|GO:0009231|GO:0055114 KEGG: 00040+1.1.1.19|KEGG: 00053+1.1.1.19|KEGG: 00740+3.5.4.26+1.1.1.193|MetaCyc: PWY-5525|UniPathway: UPA00275|UniPathway: UPA00275 SRM_RS12935 871316fa2d6c8921ae5b7604fc5474c1 397 Pfam PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region 27 127 9.2E-15 T 22-04-2016 IPR002125 Cytidine and deoxycytidylate deaminases, zinc-binding GO:0008270 SRM_RS12935 871316fa2d6c8921ae5b7604fc5474c1 397 Gene3D G3DSA:3.40.140.10 25 155 3.7E-29 T 22-04-2016 SRM_RS12935 871316fa2d6c8921ae5b7604fc5474c1 397 SUPERFAMILY SSF53927 25 172 1.07E-40 T 22-04-2016 IPR016193 Cytidine deaminase-like GO:0003824 SRM_RS12935 871316fa2d6c8921ae5b7604fc5474c1 397 ProSitePatterns PS00903 Cytidine and deoxycytidylate deaminases zinc-binding region signature. 72 115 - T 22-04-2016 IPR016192 APOBEC/CMP deaminase, zinc-binding GO:0008270|GO:0016787 SRM_RS12935 871316fa2d6c8921ae5b7604fc5474c1 397 Gene3D G3DSA:3.40.430.10 156 395 8.1E-70 T 22-04-2016 IPR024072 Dihydrofolate reductase-like domain SRM_RS12935 871316fa2d6c8921ae5b7604fc5474c1 397 SUPERFAMILY SSF53597 171 395 1.21E-52 T 22-04-2016 IPR024072 Dihydrofolate reductase-like domain SRM_RS12935 871316fa2d6c8921ae5b7604fc5474c1 397 Pfam PF01872 RibD C-terminal domain 174 389 3.4E-40 T 22-04-2016 IPR002734 Bacterial bifunctional deaminase-reductase, C-terminal GO:0008703|GO:0009231|GO:0055114 SRM_RS12935 871316fa2d6c8921ae5b7604fc5474c1 397 PANTHER PTHR11079 27 251 5.5E-53 T 22-04-2016 SRM_RS03600 37a2c70a9049286dfa9635b07585f8cd 676 PANTHER PTHR11533:SF163 294 653 6.3E-36 T 22-04-2016 SRM_RS03600 37a2c70a9049286dfa9635b07585f8cd 676 PANTHER PTHR11533:SF163 1 127 6.3E-36 T 22-04-2016 SRM_RS03600 37a2c70a9049286dfa9635b07585f8cd 676 PANTHER PTHR11533:SF163 220 260 6.3E-36 T 22-04-2016 SRM_RS03600 37a2c70a9049286dfa9635b07585f8cd 676 PANTHER PTHR11533:SF163 147 201 6.3E-36 T 22-04-2016 SRM_RS03600 37a2c70a9049286dfa9635b07585f8cd 676 SUPERFAMILY SSF55486 356 567 1.1E-34 T 22-04-2016 SRM_RS03600 37a2c70a9049286dfa9635b07585f8cd 676 PANTHER PTHR11533 294 653 6.3E-36 T 22-04-2016 IPR001930 Peptidase M1, alanine aminopeptidase/leukotriene A4 hydrolase GO:0006508 SRM_RS03600 37a2c70a9049286dfa9635b07585f8cd 676 PANTHER PTHR11533 1 127 6.3E-36 T 22-04-2016 IPR001930 Peptidase M1, alanine aminopeptidase/leukotriene A4 hydrolase GO:0006508 SRM_RS03600 37a2c70a9049286dfa9635b07585f8cd 676 PANTHER PTHR11533 220 260 6.3E-36 T 22-04-2016 IPR001930 Peptidase M1, alanine aminopeptidase/leukotriene A4 hydrolase GO:0006508 SRM_RS03600 37a2c70a9049286dfa9635b07585f8cd 676 PANTHER PTHR11533 147 201 6.3E-36 T 22-04-2016 IPR001930 Peptidase M1, alanine aminopeptidase/leukotriene A4 hydrolase GO:0006508 SRM_RS03600 37a2c70a9049286dfa9635b07585f8cd 676 Gene3D G3DSA:1.10.390.10 427 566 1.8E-16 T 22-04-2016 SRM_RS06585 149233cc1e708e4a4d8249a1c290415d 127 Pfam PF00416 Ribosomal protein S13/S18 3 109 5.4E-29 T 22-04-2016 IPR001892 Ribosomal protein S13 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 SRM_RS06585 149233cc1e708e4a4d8249a1c290415d 127 PANTHER PTHR10871 1 120 4.4E-52 T 22-04-2016 SRM_RS06585 149233cc1e708e4a4d8249a1c290415d 127 Hamap MF_01315 30S ribosomal protein S13 [rpsM]. 1 120 27.165 T 22-04-2016 IPR001892 Ribosomal protein S13 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 SRM_RS06585 149233cc1e708e4a4d8249a1c290415d 127 Gene3D G3DSA:1.10.8.50 1 71 1.8E-24 T 22-04-2016 SRM_RS06585 149233cc1e708e4a4d8249a1c290415d 127 Gene3D G3DSA:4.10.910.10 73 122 2.4E-25 T 22-04-2016 IPR027437 30s ribosomal protein S13, C-terminal SRM_RS06585 149233cc1e708e4a4d8249a1c290415d 127 SUPERFAMILY SSF46946 3 121 6.67E-41 T 22-04-2016 IPR010979 Ribosomal protein S13-like, H2TH GO:0003676 SRM_RS06585 149233cc1e708e4a4d8249a1c290415d 127 TIGRFAM TIGR03631 uS13_bact: ribosomal protein uS13 3 115 1.7E-50 T 22-04-2016 IPR019980 Ribosomal protein S13, bacterial-type GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 SRM_RS06585 149233cc1e708e4a4d8249a1c290415d 127 PIRSF PIRSF002134 1 125 2.7E-40 T 22-04-2016 IPR001892 Ribosomal protein S13 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 SRM_RS06585 149233cc1e708e4a4d8249a1c290415d 127 ProSitePatterns PS00646 Ribosomal protein S13 signature. 88 101 - T 22-04-2016 IPR018269 Ribosomal protein S13, conserved site GO:0003723|GO:0003735|GO:0005840|GO:0006412 SRM_RS08400 2a50da62f61249c8c9c83c2812e8eee6 288 Pfam PF04240 Protein of unknown function (DUF422) 66 266 5.2E-38 T 22-04-2016 IPR007354 Carotene biosynthesis associated membrane protein SRM_RS08400 2a50da62f61249c8c9c83c2812e8eee6 288 PANTHER PTHR39419 19 274 4.4E-22 T 22-04-2016 IPR007354 Carotene biosynthesis associated membrane protein SRM_RS08400 2a50da62f61249c8c9c83c2812e8eee6 288 TIGRFAM TIGR03460 crt_membr_arch: carotene biosynthesis associated membrane protein 24 273 3.2E-106 T 22-04-2016 IPR017823 Bisanhydrobacterioruberin hydratase CruF SRM_RS10735 772ca7ce5d201d95e92f54dea793e461 212 TIGRFAM TIGR01351 adk: adenylate kinase 2 207 1.0E-71 T 22-04-2016 IPR006259 Adenylate kinase subfamily GO:0004017|GO:0005524|GO:0016776 KEGG: 00230+2.7.4.3|MetaCyc: PWY-7219|UniPathway: UPA00588 SRM_RS10735 772ca7ce5d201d95e92f54dea793e461 212 SUPERFAMILY SSF52540 1 209 5.88E-39 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SRM_RS10735 772ca7ce5d201d95e92f54dea793e461 212 SUPERFAMILY SSF57774 126 149 8.22E-5 T 22-04-2016 IPR007862 Adenylate kinase, active site lid domain GO:0004017 KEGG: 00230+2.7.4.3|MetaCyc: PWY-7219|UniPathway: UPA00588 SRM_RS10735 772ca7ce5d201d95e92f54dea793e461 212 PANTHER PTHR23359 1 208 1.9E-78 T 22-04-2016 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|MetaCyc: PWY-7219|UniPathway: UPA00588 SRM_RS10735 772ca7ce5d201d95e92f54dea793e461 212 Gene3D G3DSA:3.40.50.300 1 209 1.2E-64 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SRM_RS10735 772ca7ce5d201d95e92f54dea793e461 212 ProSitePatterns PS00113 Adenylate kinase signature. 80 91 - T 22-04-2016 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|MetaCyc: PWY-7219|UniPathway: UPA00588 SRM_RS10735 772ca7ce5d201d95e92f54dea793e461 212 PRINTS PR00094 Adenylate kinase signature 4 17 2.5E-30 T 22-04-2016 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|MetaCyc: PWY-7219|UniPathway: UPA00588 SRM_RS10735 772ca7ce5d201d95e92f54dea793e461 212 PRINTS PR00094 Adenylate kinase signature 80 96 2.5E-30 T 22-04-2016 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|MetaCyc: PWY-7219|UniPathway: UPA00588 SRM_RS10735 772ca7ce5d201d95e92f54dea793e461 212 PRINTS PR00094 Adenylate kinase signature 32 46 2.5E-30 T 22-04-2016 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|MetaCyc: PWY-7219|UniPathway: UPA00588 SRM_RS10735 772ca7ce5d201d95e92f54dea793e461 212 PRINTS PR00094 Adenylate kinase signature 172 186 2.5E-30 T 22-04-2016 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|MetaCyc: PWY-7219|UniPathway: UPA00588 SRM_RS10735 772ca7ce5d201d95e92f54dea793e461 212 PRINTS PR00094 Adenylate kinase signature 155 170 2.5E-30 T 22-04-2016 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|MetaCyc: PWY-7219|UniPathway: UPA00588 SRM_RS10735 772ca7ce5d201d95e92f54dea793e461 212 Hamap MF_00235 Adenylate kinase [adk]. 1 208 48.24 T 22-04-2016 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|MetaCyc: PWY-7219|UniPathway: UPA00588 SRM_RS10735 772ca7ce5d201d95e92f54dea793e461 212 Pfam PF00406 Adenylate kinase 5 184 1.8E-48 T 22-04-2016 SRM_RS05950 1f9b76d672bbf13063b9d4f302065db1 252 Pfam PF02585 GlcNAc-PI de-N-acetylase 7 123 4.9E-20 T 22-04-2016 IPR003737 N-acetylglucosaminyl phosphatidylinositol deacetylase-related SRM_RS05950 1f9b76d672bbf13063b9d4f302065db1 252 Gene3D G3DSA:3.40.50.10320 3 233 1.6E-57 T 22-04-2016 IPR024078 Putative deacetylase LmbE-like domain SRM_RS05950 1f9b76d672bbf13063b9d4f302065db1 252 TIGRFAM TIGR04001 thiol_BshB1: bacillithiol biosynthesis deacetylase BshB1 4 232 7.6E-94 T 22-04-2016 IPR023842 Bacillithiol biosynthesis deacetylase, BshB1 GO:0019213|GO:0071793 SRM_RS05950 1f9b76d672bbf13063b9d4f302065db1 252 SUPERFAMILY SSF102588 4 233 1.31E-50 T 22-04-2016 IPR024078 Putative deacetylase LmbE-like domain SRM_RS05950 1f9b76d672bbf13063b9d4f302065db1 252 PANTHER PTHR12993 4 191 6.8E-32 T 22-04-2016 IPR003737 N-acetylglucosaminyl phosphatidylinositol deacetylase-related SRM_RS14100 0aabec5f1e5848dcc6b6b1e41d9f7f66 391 PANTHER PTHR22604 4 383 2.6E-63 T 22-04-2016 SRM_RS14100 0aabec5f1e5848dcc6b6b1e41d9f7f66 391 SUPERFAMILY SSF51735 3 167 7.88E-35 T 22-04-2016 IPR016040 NAD(P)-binding domain SRM_RS14100 0aabec5f1e5848dcc6b6b1e41d9f7f66 391 Gene3D G3DSA:3.30.360.10 157 278 1.4E-38 T 22-04-2016 SRM_RS14100 0aabec5f1e5848dcc6b6b1e41d9f7f66 391 Gene3D G3DSA:3.30.360.10 327 385 1.4E-38 T 22-04-2016 SRM_RS14100 0aabec5f1e5848dcc6b6b1e41d9f7f66 391 Pfam PF01408 Oxidoreductase family, NAD-binding Rossmann fold 7 135 1.9E-21 T 22-04-2016 IPR000683 Oxidoreductase, N-terminal GO:0016491 SRM_RS14100 0aabec5f1e5848dcc6b6b1e41d9f7f66 391 Gene3D G3DSA:3.40.50.720 4 156 1.5E-35 T 22-04-2016 IPR016040 NAD(P)-binding domain SRM_RS14100 0aabec5f1e5848dcc6b6b1e41d9f7f66 391 Pfam PF02894 Oxidoreductase family, C-terminal alpha/beta domain 149 268 8.5E-6 T 22-04-2016 IPR004104 Oxidoreductase, C-terminal GO:0008152|GO:0016491|GO:0055114 SRM_RS14100 0aabec5f1e5848dcc6b6b1e41d9f7f66 391 PANTHER PTHR22604:SF123 4 383 2.6E-63 T 22-04-2016 SRM_RS14100 0aabec5f1e5848dcc6b6b1e41d9f7f66 391 SUPERFAMILY SSF55347 143 302 5.07E-34 T 22-04-2016 SRM_RS09910 ea4bf1e82350c7f122e2577f927cc060 476 PANTHER PTHR11206 20 469 8.7E-69 T 22-04-2016 SRM_RS09910 ea4bf1e82350c7f122e2577f927cc060 476 Pfam PF01554 MatE 264 425 6.5E-22 T 22-04-2016 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: REACT_15518|Reactome: REACT_20633 SRM_RS09910 ea4bf1e82350c7f122e2577f927cc060 476 Pfam PF01554 MatE 38 196 4.1E-28 T 22-04-2016 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: REACT_15518|Reactome: REACT_20633 SRM_RS09910 ea4bf1e82350c7f122e2577f927cc060 476 TIGRFAM TIGR00797 matE: MATE efflux family protein 36 436 4.3E-64 T 22-04-2016 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: REACT_15518|Reactome: REACT_20633 SRM_RS09910 ea4bf1e82350c7f122e2577f927cc060 476 PANTHER PTHR11206:SF95 20 469 8.7E-69 T 22-04-2016 SRM_RS09910 ea4bf1e82350c7f122e2577f927cc060 476 PIRSF PIRSF006603 22 472 1.4E-73 T 22-04-2016 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: REACT_15518|Reactome: REACT_20633 SRM_RS01180 833da676b0b524120e34b5b7895a841e 209 Gene3D G3DSA:1.10.357.10 5 199 2.7E-39 T 22-04-2016 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 SRM_RS01180 833da676b0b524120e34b5b7895a841e 209 PANTHER PTHR30055 5 196 1.9E-36 T 22-04-2016 SRM_RS01180 833da676b0b524120e34b5b7895a841e 209 Pfam PF00440 Bacterial regulatory proteins, tetR family 22 67 2.6E-19 T 22-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 SRM_RS01180 833da676b0b524120e34b5b7895a841e 209 SUPERFAMILY SSF46689 10 83 1.8E-18 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 SRM_RS01180 833da676b0b524120e34b5b7895a841e 209 ProSitePatterns PS01081 TetR-type HTH domain signature. 34 65 - T 22-04-2016 IPR023772 DNA-binding HTH domain, TetR-type, conserved site SRM_RS01180 833da676b0b524120e34b5b7895a841e 209 SUPERFAMILY SSF48498 90 197 7.69E-13 T 22-04-2016 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal SRM_RS01180 833da676b0b524120e34b5b7895a841e 209 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 22 35 8.9E-11 T 22-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 SRM_RS01180 833da676b0b524120e34b5b7895a841e 209 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 43 66 8.9E-11 T 22-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 SRM_RS05740 14db24bcf5157796924b05b2849d52c8 382 PANTHER PTHR22935:SF80 104 331 4.0E-41 T 22-04-2016 SRM_RS05740 14db24bcf5157796924b05b2849d52c8 382 Pfam PF00144 Beta-lactamase 76 352 1.3E-28 T 22-04-2016 IPR001466 Beta-lactamase-related SRM_RS05740 14db24bcf5157796924b05b2849d52c8 382 SUPERFAMILY SSF56601 24 361 6.5E-69 T 22-04-2016 IPR012338 Beta-lactamase/transpeptidase-like SRM_RS05740 14db24bcf5157796924b05b2849d52c8 382 Gene3D G3DSA:3.40.710.10 73 355 3.6E-43 T 22-04-2016 IPR012338 Beta-lactamase/transpeptidase-like SRM_RS05740 14db24bcf5157796924b05b2849d52c8 382 PANTHER PTHR22935 104 331 4.0E-41 T 22-04-2016 SRM_RS13600 25a02e7ecb2f102eb650fc04cb1448ca 562 Pfam PF12627 Probable RNA and SrmB- binding site of polymerase A 209 268 1.4E-13 T 22-04-2016 IPR032828 tRNA nucleotidyltransferase/poly(A) polymerase, RNA and SrmB- binding domain SRM_RS13600 25a02e7ecb2f102eb650fc04cb1448ca 562 SUPERFAMILY SSF81301 21 177 2.18E-30 T 22-04-2016 SRM_RS13600 25a02e7ecb2f102eb650fc04cb1448ca 562 Gene3D G3DSA:1.10.3090.10 440 461 3.3E-51 T 22-04-2016 SRM_RS13600 25a02e7ecb2f102eb650fc04cb1448ca 562 Gene3D G3DSA:1.10.3090.10 180 372 3.3E-51 T 22-04-2016 SRM_RS13600 25a02e7ecb2f102eb650fc04cb1448ca 562 PANTHER PTHR13734:SF5 23 511 7.4E-81 T 22-04-2016 SRM_RS13600 25a02e7ecb2f102eb650fc04cb1448ca 562 PANTHER PTHR13734 23 511 7.4E-81 T 22-04-2016 SRM_RS13600 25a02e7ecb2f102eb650fc04cb1448ca 562 SMART SM00471 280 393 1.7E-5 T 22-04-2016 IPR003607 HD/PDEase domain SRM_RS13600 25a02e7ecb2f102eb650fc04cb1448ca 562 Pfam PF01743 Poly A polymerase head domain 40 180 7.4E-23 T 22-04-2016 IPR002646 Poly A polymerase, head domain GO:0003723|GO:0006396|GO:0016779 SRM_RS13600 25a02e7ecb2f102eb650fc04cb1448ca 562 SUPERFAMILY SSF81891 180 494 1.83E-55 T 22-04-2016 SRM_RS13600 25a02e7ecb2f102eb650fc04cb1448ca 562 Gene3D G3DSA:3.30.460.10 23 177 2.5E-36 T 22-04-2016 SRM_RS13600 25a02e7ecb2f102eb650fc04cb1448ca 562 Pfam PF01966 HD domain 285 388 6.8E-14 T 22-04-2016 IPR006674 HD domain SRM_RS13600 25a02e7ecb2f102eb650fc04cb1448ca 562 TIGRFAM TIGR00277 HDIG: HDIG domain 283 348 3.3E-11 T 22-04-2016 IPR006675 HDIG domain SRM_RS09165 3d97cad375eb79413881e55baad75dce 209 Gene3D G3DSA:3.40.30.10 11 197 1.2E-37 T 22-04-2016 IPR012336 Thioredoxin-like fold SRM_RS09165 3d97cad375eb79413881e55baad75dce 209 SUPERFAMILY SSF52833 66 148 5.03E-8 T 22-04-2016 IPR012336 Thioredoxin-like fold SRM_RS09165 3d97cad375eb79413881e55baad75dce 209 Pfam PF14595 Thioredoxin 42 157 5.1E-34 T 22-04-2016 SRM_RS05770 33178b4b751e1d0d36a8a32e43d62040 460 PANTHER PTHR11616 377 456 7.0E-149 T 22-04-2016 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 SRM_RS05770 33178b4b751e1d0d36a8a32e43d62040 460 PANTHER PTHR11616 7 356 7.0E-149 T 22-04-2016 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 SRM_RS05770 33178b4b751e1d0d36a8a32e43d62040 460 Pfam PF00209 Sodium:neurotransmitter symporter family 8 124 3.7E-27 T 22-04-2016 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 SRM_RS05770 33178b4b751e1d0d36a8a32e43d62040 460 Pfam PF00209 Sodium:neurotransmitter symporter family 150 355 4.7E-30 T 22-04-2016 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 SRM_RS05770 33178b4b751e1d0d36a8a32e43d62040 460 PRINTS PR00176 Sodium/chloride neurotransmitter symporter signature 45 64 7.2E-15 T 22-04-2016 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 SRM_RS05770 33178b4b751e1d0d36a8a32e43d62040 460 PRINTS PR00176 Sodium/chloride neurotransmitter symporter signature 16 37 7.2E-15 T 22-04-2016 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 SRM_RS05770 33178b4b751e1d0d36a8a32e43d62040 460 PRINTS PR00176 Sodium/chloride neurotransmitter symporter signature 91 117 7.2E-15 T 22-04-2016 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 SRM_RS05770 33178b4b751e1d0d36a8a32e43d62040 460 PRINTS PR00176 Sodium/chloride neurotransmitter symporter signature 392 412 7.2E-15 T 22-04-2016 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 SRM_RS05770 33178b4b751e1d0d36a8a32e43d62040 460 ProSitePatterns PS00610 Sodium:neurotransmitter symporter family signature 1. 32 46 - T 22-04-2016 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 SRM_RS05770 33178b4b751e1d0d36a8a32e43d62040 460 SUPERFAMILY SSF161070 8 455 2.48E-130 T 22-04-2016 SRM_RS05770 33178b4b751e1d0d36a8a32e43d62040 460 PANTHER PTHR11616:SF167 377 456 7.0E-149 T 22-04-2016 SRM_RS05770 33178b4b751e1d0d36a8a32e43d62040 460 PANTHER PTHR11616:SF167 7 356 7.0E-149 T 22-04-2016 SRM_RS03095 37ad17d240b7d61320a7b12904319298 335 TIGRFAM TIGR00341 TIGR00341: TIGR00341 family protein 96 328 6.9E-45 T 22-04-2016 SRM_RS03095 37ad17d240b7d61320a7b12904319298 335 PANTHER PTHR20992:SF9 85 324 1.0E-41 T 22-04-2016 SRM_RS03095 37ad17d240b7d61320a7b12904319298 335 Pfam PF04087 Domain of unknown function (DUF389) 152 286 9.0E-31 T 22-04-2016 IPR005240 Protein of unknown function DUF389 SRM_RS03095 37ad17d240b7d61320a7b12904319298 335 PANTHER PTHR20992 85 324 1.0E-41 T 22-04-2016 SRM_RS12560 526f80f2fff629837609b935c9db6462 952 Hamap MF_01600 UPF0182 protein . 4 859 18.466 T 22-04-2016 IPR005372 Uncharacterised protein family UPF0182 GO:0016021 SRM_RS12560 526f80f2fff629837609b935c9db6462 952 PANTHER PTHR39344 3 922 2.3E-273 T 22-04-2016 SRM_RS12560 526f80f2fff629837609b935c9db6462 952 Pfam PF03699 Uncharacterised protein family (UPF0182) 12 784 8.8E-263 T 22-04-2016 IPR005372 Uncharacterised protein family UPF0182 GO:0016021 SRM_RS09145 06663691a89e7652303e88030d34fdfb 140 Gene3D G3DSA:3.40.50.1010 1 129 4.7E-10 T 22-04-2016 IPR029060 PIN domain-like SRM_RS09145 06663691a89e7652303e88030d34fdfb 140 Pfam PF13470 PIN domain 3 116 1.9E-14 T 22-04-2016 IPR002716 PIN domain SRM_RS09145 06663691a89e7652303e88030d34fdfb 140 SUPERFAMILY SSF88723 1 133 1.96E-18 T 22-04-2016 IPR029060 PIN domain-like SRM_RS03760 27a3162c03337d74cf4c8204c3a53f35 564 ProSitePatterns PS00136 Serine proteases, subtilase family, aspartic acid active site. 97 108 - T 22-04-2016 IPR023827 Peptidase S8, subtilisin, Asp-active site SRM_RS03760 27a3162c03337d74cf4c8204c3a53f35 564 PANTHER PTHR10795 97 114 6.9E-51 T 22-04-2016 IPR015500 Peptidase S8, subtilisin-related SRM_RS03760 27a3162c03337d74cf4c8204c3a53f35 564 PANTHER PTHR10795 292 300 6.9E-51 T 22-04-2016 IPR015500 Peptidase S8, subtilisin-related SRM_RS03760 27a3162c03337d74cf4c8204c3a53f35 564 PANTHER PTHR10795 316 521 6.9E-51 T 22-04-2016 IPR015500 Peptidase S8, subtilisin-related SRM_RS03760 27a3162c03337d74cf4c8204c3a53f35 564 Pfam PF00082 Subtilase family 94 522 2.5E-48 T 22-04-2016 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 SRM_RS03760 27a3162c03337d74cf4c8204c3a53f35 564 SUPERFAMILY SSF52743 84 130 1.63E-63 T 22-04-2016 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 SRM_RS03760 27a3162c03337d74cf4c8204c3a53f35 564 SUPERFAMILY SSF52743 315 554 1.63E-63 T 22-04-2016 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 SRM_RS03760 27a3162c03337d74cf4c8204c3a53f35 564 Gene3D G3DSA:3.40.50.200 293 557 9.0E-76 T 22-04-2016 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 SRM_RS03760 27a3162c03337d74cf4c8204c3a53f35 564 Gene3D G3DSA:3.40.50.200 61 118 9.0E-76 T 22-04-2016 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 SRM_RS03760 27a3162c03337d74cf4c8204c3a53f35 564 PIRSF PIRSF037892 1 563 1.8E-273 T 22-04-2016 IPR017308 Peptidase S8A, subtilisin-related, bacteroidetes SRM_RS03760 27a3162c03337d74cf4c8204c3a53f35 564 ProSitePatterns PS00138 Serine proteases, subtilase family, serine active site. 484 494 - T 22-04-2016 IPR023828 Peptidase S8, subtilisin, Ser-active site SRM_RS03760 27a3162c03337d74cf4c8204c3a53f35 564 ProSitePatterns PS00137 Serine proteases, subtilase family, histidine active site. 317 327 - T 22-04-2016 IPR022398 Peptidase S8, subtilisin, His-active site SRM_RS03760 27a3162c03337d74cf4c8204c3a53f35 564 PRINTS PR00723 Subtilisin serine protease family (S8) signature 92 111 1.5E-15 T 22-04-2016 IPR015500 Peptidase S8, subtilisin-related SRM_RS03760 27a3162c03337d74cf4c8204c3a53f35 564 PRINTS PR00723 Subtilisin serine protease family (S8) signature 313 326 1.5E-15 T 22-04-2016 IPR015500 Peptidase S8, subtilisin-related SRM_RS03760 27a3162c03337d74cf4c8204c3a53f35 564 PRINTS PR00723 Subtilisin serine protease family (S8) signature 483 499 1.5E-15 T 22-04-2016 IPR015500 Peptidase S8, subtilisin-related SRM_RS04515 4741773429931a913ac4b6f61600a718 506 SUPERFAMILY SSF51445 4 500 2.17E-171 T 22-04-2016 IPR017853 Glycoside hydrolase superfamily SRM_RS04515 4741773429931a913ac4b6f61600a718 506 Gene3D G3DSA:3.20.20.80 3 501 7.2E-184 T 22-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 SRM_RS04515 4741773429931a913ac4b6f61600a718 506 Pfam PF02446 4-alpha-glucanotransferase 11 479 7.1E-161 T 22-04-2016 IPR003385 Glycoside hydrolase, family 77 GO:0004134|GO:0005975 KEGG: 00500+2.4.1.25|MetaCyc: PWY-5941|MetaCyc: PWY-6724|MetaCyc: PWY-6737|MetaCyc: PWY-7238 SRM_RS04515 4741773429931a913ac4b6f61600a718 506 TIGRFAM TIGR00217 malQ: 4-alpha-glucanotransferase 3 500 4.0E-113 T 22-04-2016 IPR003385 Glycoside hydrolase, family 77 GO:0004134|GO:0005975 KEGG: 00500+2.4.1.25|MetaCyc: PWY-5941|MetaCyc: PWY-6724|MetaCyc: PWY-6737|MetaCyc: PWY-7238 SRM_RS04515 4741773429931a913ac4b6f61600a718 506 PANTHER PTHR32438 3 502 3.0E-155 T 22-04-2016 SRM_RS04515 4741773429931a913ac4b6f61600a718 506 PANTHER PTHR32438:SF5 3 502 3.0E-155 T 22-04-2016 SRM_RS14180 7a46b0ee7c3c37c9556dfefd52be8338 123 PANTHER PTHR10584 8 66 5.8E-18 T 22-04-2016 SRM_RS14180 7a46b0ee7c3c37c9556dfefd52be8338 123 Pfam PF04241 Protein of unknown function (DUF423) 19 105 8.5E-32 T 22-04-2016 IPR006696 Protein of unknown function DUF423 SRM_RS14180 7a46b0ee7c3c37c9556dfefd52be8338 123 PANTHER PTHR10584:SF191 8 66 5.8E-18 T 22-04-2016 SRM_RS05370 548ead45728a04d211357be75ca03f90 336 Pfam PF07313 Protein of unknown function (DUF1460) 100 327 8.8E-62 T 22-04-2016 IPR010846 Protein of unknown function DUF1460 SRM_RS05370 548ead45728a04d211357be75ca03f90 336 Gene3D G3DSA:1.10.3670.10 93 238 9.1E-37 T 22-04-2016 SRM_RS05370 548ead45728a04d211357be75ca03f90 336 Gene3D G3DSA:2.30.260.10 239 333 3.6E-22 T 22-04-2016 IPR023360 Putative xylanase-like C-terminal SRM_RS05370 548ead45728a04d211357be75ca03f90 336 SUPERFAMILY SSF54001 71 335 3.24E-71 T 22-04-2016 SRM_RS04725 3d9b4c15e4b6c6dd00bd1b214559dc47 345 SUPERFAMILY SSF53850 35 262 3.88E-25 T 22-04-2016 SRM_RS04725 3d9b4c15e4b6c6dd00bd1b214559dc47 345 PANTHER PTHR31528:SF5 16 342 2.0E-82 T 22-04-2016 SRM_RS04725 3d9b4c15e4b6c6dd00bd1b214559dc47 345 Gene3D G3DSA:3.40.190.10 120 217 7.6E-7 T 22-04-2016 SRM_RS04725 3d9b4c15e4b6c6dd00bd1b214559dc47 345 Pfam PF09084 NMT1/THI5 like 45 262 3.3E-58 T 22-04-2016 IPR015168 SsuA/THI5-like SRM_RS04725 3d9b4c15e4b6c6dd00bd1b214559dc47 345 PANTHER PTHR31528 16 342 2.0E-82 T 22-04-2016 IPR027939 NMT1/THI5 family GO:0009228 UniPathway: UPA00060 SRM_RS07765 9bb8fbbfb89c2a6f5ced1349c8efa1f6 412 SUPERFAMILY SSF53218 1 200 1.11E-34 T 22-04-2016 IPR001453 MoaB/Mog domain SRM_RS07765 9bb8fbbfb89c2a6f5ced1349c8efa1f6 412 PANTHER PTHR13939 1 411 1.6E-144 T 22-04-2016 SRM_RS07765 9bb8fbbfb89c2a6f5ced1349c8efa1f6 412 PIRSF PIRSF006728 1 412 2.1E-125 T 22-04-2016 IPR008135 Competence-induced protein CinA SRM_RS07765 9bb8fbbfb89c2a6f5ced1349c8efa1f6 412 SMART SM00852 4 171 2.2E-31 T 22-04-2016 IPR001453 MoaB/Mog domain SRM_RS07765 9bb8fbbfb89c2a6f5ced1349c8efa1f6 412 SUPERFAMILY SSF142433 252 410 2.75E-49 T 22-04-2016 IPR008136 CinA, C-terminal SRM_RS07765 9bb8fbbfb89c2a6f5ced1349c8efa1f6 412 PANTHER PTHR13939:SF0 1 411 1.6E-144 T 22-04-2016 SRM_RS07765 9bb8fbbfb89c2a6f5ced1349c8efa1f6 412 Gene3D G3DSA:3.40.980.10 1 201 1.9E-29 T 22-04-2016 IPR001453 MoaB/Mog domain SRM_RS07765 9bb8fbbfb89c2a6f5ced1349c8efa1f6 412 TIGRFAM TIGR00200 cinA_nterm: competence/damage-inducible protein CinA N-terminal domain 1 410 2.9E-98 T 22-04-2016 IPR008135 Competence-induced protein CinA SRM_RS07765 9bb8fbbfb89c2a6f5ced1349c8efa1f6 412 Pfam PF02464 Competence-damaged protein 258 410 4.4E-54 T 22-04-2016 IPR008136 CinA, C-terminal SRM_RS07765 9bb8fbbfb89c2a6f5ced1349c8efa1f6 412 Pfam PF00994 Probable molybdopterin binding domain 5 170 9.4E-33 T 22-04-2016 IPR001453 MoaB/Mog domain SRM_RS07765 9bb8fbbfb89c2a6f5ced1349c8efa1f6 412 TIGRFAM TIGR00199 PncC_domain: amidohydrolase, PncC family 263 406 5.3E-42 T 22-04-2016 IPR008136 CinA, C-terminal SRM_RS07765 9bb8fbbfb89c2a6f5ced1349c8efa1f6 412 Gene3D G3DSA:3.90.950.20 250 411 1.2E-53 T 22-04-2016 IPR008136 CinA, C-terminal SRM_RS07765 9bb8fbbfb89c2a6f5ced1349c8efa1f6 412 Hamap MF_00226_B Putative competence-damage inducible protein [cinA]. 1 412 140.2 T 22-04-2016 IPR008135 Competence-induced protein CinA SRM_RS13125 7c59d0e514651e4e8bf6f830e37f3fe7 543 Gene3D G3DSA:3.40.1190.10 186 406 1.9E-57 T 22-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 SRM_RS13125 7c59d0e514651e4e8bf6f830e37f3fe7 543 PANTHER PTHR23135 184 532 1.1E-85 T 22-04-2016 SRM_RS13125 7c59d0e514651e4e8bf6f830e37f3fe7 543 SUPERFAMILY SSF53244 410 533 1.43E-21 T 22-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 SRM_RS13125 7c59d0e514651e4e8bf6f830e37f3fe7 543 SUPERFAMILY SSF53623 194 407 1.44E-46 T 22-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 SRM_RS13125 7c59d0e514651e4e8bf6f830e37f3fe7 543 Pfam PF08245 Mur ligase middle domain 199 388 1.8E-38 T 22-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 SRM_RS13125 7c59d0e514651e4e8bf6f830e37f3fe7 543 Pfam PF02875 Mur ligase family, glutamate ligase domain 410 489 1.6E-10 T 22-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 SRM_RS13125 7c59d0e514651e4e8bf6f830e37f3fe7 543 Gene3D G3DSA:3.90.190.20 408 532 7.3E-21 T 22-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 SRM_RS13125 7c59d0e514651e4e8bf6f830e37f3fe7 543 PANTHER PTHR23135:SF3 184 532 1.1E-85 T 22-04-2016 IPR005863 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase GO:0005524|GO:0005737|GO:0047480|GO:0071555 KEGG: 00300+6.3.2.10|KEGG: 00550+6.3.2.10|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 SRM_RS00915 74b13bda688588b1b6c03de2c4c7016a 132 Pfam PF00380 Ribosomal protein S9/S16 11 132 4.5E-46 T 22-04-2016 IPR000754 Ribosomal protein S9 GO:0003735|GO:0005840|GO:0006412 SRM_RS00915 74b13bda688588b1b6c03de2c4c7016a 132 Hamap MF_00532_B 30S ribosomal protein S9 [rpsI]. 2 132 30.184 T 22-04-2016 IPR023035 Ribosomal protein S9, bacterial/plastid SRM_RS00915 74b13bda688588b1b6c03de2c4c7016a 132 SUPERFAMILY SSF54211 6 132 1.14E-44 T 22-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold SRM_RS00915 74b13bda688588b1b6c03de2c4c7016a 132 Gene3D G3DSA:3.30.230.10 6 132 5.2E-48 T 22-04-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup SRM_RS00915 74b13bda688588b1b6c03de2c4c7016a 132 ProSitePatterns PS00360 Ribosomal protein S9 signature. 71 89 - T 22-04-2016 IPR020574 Ribosomal protein S9, conserved site GO:0003735|GO:0005840|GO:0006412 SRM_RS00915 74b13bda688588b1b6c03de2c4c7016a 132 PANTHER PTHR21569 1 132 1.5E-61 T 22-04-2016 IPR000754 Ribosomal protein S9 GO:0003735|GO:0005840|GO:0006412 SRM_RS09375 4df54e3042278b24f2623a1c5578fb6e 245 PANTHER PTHR37311:SF1 1 245 3.8E-50 T 22-04-2016 SRM_RS09375 4df54e3042278b24f2623a1c5578fb6e 245 SUPERFAMILY SSF142823 1 236 1.7E-67 T 22-04-2016 IPR005238 ComB-like GO:0000287|GO:0050532 KEGG: 00680+3.1.3.71 SRM_RS09375 4df54e3042278b24f2623a1c5578fb6e 245 Gene3D G3DSA:3.90.1560.10 9 238 1.3E-72 T 22-04-2016 IPR005238 ComB-like GO:0000287|GO:0050532 KEGG: 00680+3.1.3.71 SRM_RS09375 4df54e3042278b24f2623a1c5578fb6e 245 Hamap MF_00490 2-phosphosulfolactate phosphatase [comB]. 5 240 27.925 T 22-04-2016 IPR022995 Probable 2-phosphosulpholactate phosphatase GO:0019295|GO:0050532 KEGG: 00680+3.1.3.71 SRM_RS09375 4df54e3042278b24f2623a1c5578fb6e 245 PANTHER PTHR37311 1 245 3.8E-50 T 22-04-2016 SRM_RS09375 4df54e3042278b24f2623a1c5578fb6e 245 Pfam PF04029 2-phosphosulpholactate phosphatase 9 233 1.2E-73 T 22-04-2016 IPR005238 ComB-like GO:0000287|GO:0050532 KEGG: 00680+3.1.3.71 SRM_RS12520 360ee277b7e80705353d11d1ae48d2a9 395 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 217 254 - T 22-04-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 SRM_RS12520 360ee277b7e80705353d11d1ae48d2a9 395 Pfam PF00202 Aminotransferase class-III 18 385 6.3E-96 T 22-04-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 SRM_RS12520 360ee277b7e80705353d11d1ae48d2a9 395 Gene3D G3DSA:3.40.640.10 58 297 1.5E-82 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 SRM_RS12520 360ee277b7e80705353d11d1ae48d2a9 395 PANTHER PTHR11986 3 393 8.8E-139 T 22-04-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 SRM_RS12520 360ee277b7e80705353d11d1ae48d2a9 395 Gene3D G3DSA:3.90.1150.10 298 387 1.4E-28 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 SRM_RS12520 360ee277b7e80705353d11d1ae48d2a9 395 Gene3D G3DSA:3.90.1150.10 10 57 1.4E-28 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 SRM_RS12520 360ee277b7e80705353d11d1ae48d2a9 395 Hamap MF_01107 Acetylornithine/succinyldiaminopimelate aminotransferase [argD]. 11 386 36.963 T 22-04-2016 IPR004636 Acetylornithine/Succinylornithine transaminase family GO:0006525|GO:0008483 SRM_RS12520 360ee277b7e80705353d11d1ae48d2a9 395 SUPERFAMILY SSF53383 16 386 3.84E-111 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase SRM_RS09450 fc055dcc3dbf4063dfdac6cdd69db598 439 SUPERFAMILY SSF63411 244 428 1.28E-30 T 22-04-2016 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 SRM_RS09450 fc055dcc3dbf4063dfdac6cdd69db598 439 PANTHER PTHR11851 61 417 5.2E-47 T 22-04-2016 SRM_RS09450 fc055dcc3dbf4063dfdac6cdd69db598 439 SUPERFAMILY SSF63411 60 232 4.78E-30 T 22-04-2016 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 SRM_RS09450 fc055dcc3dbf4063dfdac6cdd69db598 439 Gene3D G3DSA:3.30.830.10 65 233 2.0E-29 T 22-04-2016 IPR011237 Peptidase M16 domain GO:0046872 SRM_RS09450 fc055dcc3dbf4063dfdac6cdd69db598 439 PANTHER PTHR11851:SF140 61 417 5.2E-47 T 22-04-2016 SRM_RS09450 fc055dcc3dbf4063dfdac6cdd69db598 439 Gene3D G3DSA:3.30.830.10 246 427 2.3E-26 T 22-04-2016 IPR011237 Peptidase M16 domain GO:0046872 SRM_RS09450 fc055dcc3dbf4063dfdac6cdd69db598 439 Pfam PF05193 Peptidase M16 inactive domain 183 361 2.4E-23 T 22-04-2016 IPR007863 Peptidase M16, C-terminal SRM_RS09450 fc055dcc3dbf4063dfdac6cdd69db598 439 Pfam PF00675 Insulinase (Peptidase family M16) 68 154 4.0E-7 T 22-04-2016 IPR011765 Peptidase M16, N-terminal SRM_RS07495 02f6bf5df88b9a139d9714d08461337a 318 SUPERFAMILY SSF52540 3 223 3.69E-63 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SRM_RS07495 02f6bf5df88b9a139d9714d08461337a 318 PANTHER PTHR24220:SF523 4 222 3.2E-90 T 22-04-2016 SRM_RS07495 02f6bf5df88b9a139d9714d08461337a 318 Pfam PF13732 Domain of unknown function (DUF4162) 214 303 1.0E-7 T 22-04-2016 IPR025302 Domain of unknown function DUF4162 SRM_RS07495 02f6bf5df88b9a139d9714d08461337a 318 Pfam PF00005 ABC transporter 19 161 1.2E-28 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 SRM_RS07495 02f6bf5df88b9a139d9714d08461337a 318 SMART SM00382 27 209 1.9E-13 T 22-04-2016 IPR003593 AAA+ ATPase domain SRM_RS07495 02f6bf5df88b9a139d9714d08461337a 318 PANTHER PTHR24220 4 222 3.2E-90 T 22-04-2016 SRM_RS07495 02f6bf5df88b9a139d9714d08461337a 318 Gene3D G3DSA:3.40.50.300 3 229 2.3E-70 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SRM_RS07685 d4dd61646e028cfd5937f0b77681d063 120 TIGRFAM TIGR02436 TIGR02436: four helix bundle protein 8 114 1.5E-28 T 22-04-2016 IPR012657 23S rRNA-intervening sequence protein SRM_RS07685 d4dd61646e028cfd5937f0b77681d063 120 Gene3D G3DSA:1.20.1440.60 1 116 2.0E-27 T 22-04-2016 IPR012657 23S rRNA-intervening sequence protein SRM_RS07685 d4dd61646e028cfd5937f0b77681d063 120 Pfam PF05635 23S rRNA-intervening sequence protein 5 108 1.2E-26 T 22-04-2016 IPR012657 23S rRNA-intervening sequence protein SRM_RS07685 d4dd61646e028cfd5937f0b77681d063 120 PANTHER PTHR38471 1 120 9.2E-14 T 22-04-2016 SRM_RS07685 d4dd61646e028cfd5937f0b77681d063 120 SUPERFAMILY SSF158446 1 116 1.7E-28 T 22-04-2016 SRM_RS15925 3b231efa065a8955c010f5ffb4e68bdf 542 Gene3D G3DSA:3.30.1330.60 433 532 3.5E-14 T 22-04-2016 IPR006665 OmpA-like domain SRM_RS15925 3b231efa065a8955c010f5ffb4e68bdf 542 SUPERFAMILY SSF103088 424 532 5.49E-14 T 22-04-2016 IPR006665 OmpA-like domain SRM_RS15925 3b231efa065a8955c010f5ffb4e68bdf 542 SUPERFAMILY SSF56925 60 253 2.62E-11 T 22-04-2016 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 SRM_RS15925 3b231efa065a8955c010f5ffb4e68bdf 542 Pfam PF00801 PKD domain 266 326 4.0E-13 T 22-04-2016 IPR000601 PKD domain SRM_RS15925 3b231efa065a8955c010f5ffb4e68bdf 542 Pfam PF00801 PKD domain 350 414 9.7E-18 T 22-04-2016 IPR000601 PKD domain SRM_RS15925 3b231efa065a8955c010f5ffb4e68bdf 542 SUPERFAMILY SSF49299 339 424 1.24E-19 T 22-04-2016 IPR000601 PKD domain SRM_RS15925 3b231efa065a8955c010f5ffb4e68bdf 542 Pfam PF00691 OmpA family 439 529 3.0E-12 T 22-04-2016 IPR006665 OmpA-like domain SRM_RS15925 3b231efa065a8955c010f5ffb4e68bdf 542 Gene3D G3DSA:2.60.40.670 350 421 2.7E-21 T 22-04-2016 IPR000601 PKD domain SRM_RS15925 3b231efa065a8955c010f5ffb4e68bdf 542 Gene3D G3DSA:2.60.40.670 263 336 2.5E-18 T 22-04-2016 IPR000601 PKD domain SRM_RS15925 3b231efa065a8955c010f5ffb4e68bdf 542 SMART SM00089 347 424 7.8E-22 T 22-04-2016 IPR022409 PKD/Chitinase domain SRM_RS15925 3b231efa065a8955c010f5ffb4e68bdf 542 SMART SM00089 257 339 2.1E-13 T 22-04-2016 IPR022409 PKD/Chitinase domain SRM_RS15925 3b231efa065a8955c010f5ffb4e68bdf 542 Gene3D G3DSA:2.40.160.20 44 258 5.2E-13 T 22-04-2016 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 SRM_RS15925 3b231efa065a8955c010f5ffb4e68bdf 542 SUPERFAMILY SSF49299 250 341 1.03E-17 T 22-04-2016 IPR000601 PKD domain SRM_RS15925 3b231efa065a8955c010f5ffb4e68bdf 542 Pfam PF13505 Outer membrane protein beta-barrel domain 45 222 3.9E-9 T 22-04-2016 IPR027385 Outer membrane protein beta-barrel SRM_RS03175 5e8636dc6df6b78b377d1587d2fc153f 206 Gene3D G3DSA:2.30.110.10 20 195 2.4E-20 T 22-04-2016 IPR012349 FMN-binding split barrel GO:0010181|GO:0016491|GO:0055114 UniPathway: UPA00647 SRM_RS03175 5e8636dc6df6b78b377d1587d2fc153f 206 SUPERFAMILY SSF50475 20 171 2.5E-14 T 22-04-2016 IPR012349 FMN-binding split barrel GO:0010181|GO:0016491|GO:0055114 UniPathway: UPA00647 SRM_RS03175 5e8636dc6df6b78b377d1587d2fc153f 206 Pfam PF01613 Flavin reductase like domain 25 164 1.2E-9 T 22-04-2016 IPR002563 Flavin reductase like domain GO:0010181 SRM_RS07830 c21b91ba52ab907ca55ffa0951da9dff 321 SUPERFAMILY SSF52402 24 156 2.85E-26 T 22-04-2016 SRM_RS07830 c21b91ba52ab907ca55ffa0951da9dff 321 PRINTS PR01438 Universal stress protein signature 134 156 1.0E-15 T 22-04-2016 IPR006015 Universal stress protein A SRM_RS07830 c21b91ba52ab907ca55ffa0951da9dff 321 PRINTS PR01438 Universal stress protein signature 23 41 1.0E-15 T 22-04-2016 IPR006015 Universal stress protein A SRM_RS07830 c21b91ba52ab907ca55ffa0951da9dff 321 PRINTS PR01438 Universal stress protein signature 116 128 1.0E-15 T 22-04-2016 IPR006015 Universal stress protein A SRM_RS07830 c21b91ba52ab907ca55ffa0951da9dff 321 Gene3D G3DSA:3.40.50.620 19 155 1.7E-27 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold SRM_RS07830 c21b91ba52ab907ca55ffa0951da9dff 321 Gene3D G3DSA:3.40.50.620 168 306 5.1E-34 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold SRM_RS07830 c21b91ba52ab907ca55ffa0951da9dff 321 PANTHER PTHR31964:SF26 171 306 5.3E-24 T 22-04-2016 SRM_RS07830 c21b91ba52ab907ca55ffa0951da9dff 321 Pfam PF00582 Universal stress protein family 169 306 7.6E-27 T 22-04-2016 IPR006016 UspA GO:0006950 SRM_RS07830 c21b91ba52ab907ca55ffa0951da9dff 321 Pfam PF00582 Universal stress protein family 23 155 4.7E-26 T 22-04-2016 IPR006016 UspA GO:0006950 SRM_RS07830 c21b91ba52ab907ca55ffa0951da9dff 321 SUPERFAMILY SSF52402 169 306 6.87E-32 T 22-04-2016 SRM_RS07830 c21b91ba52ab907ca55ffa0951da9dff 321 PANTHER PTHR31964 171 306 5.3E-24 T 22-04-2016 SRM_RS06480 40022a0d207f07232832a94566ce1691 215 Pfam PF00573 Ribosomal protein L4/L1 family 18 205 1.4E-62 T 22-04-2016 IPR002136 Ribosomal protein L4/L1e GO:0003735|GO:0005840|GO:0006412 SRM_RS06480 40022a0d207f07232832a94566ce1691 215 Gene3D G3DSA:3.40.1370.10 58 207 3.3E-50 T 22-04-2016 IPR023574 Ribosomal protein L4 domain GO:0003735|GO:0005840|GO:0006412 SRM_RS06480 40022a0d207f07232832a94566ce1691 215 PANTHER PTHR10746 1 210 2.2E-75 T 22-04-2016 IPR013005 50S ribosomal protein uL4 SRM_RS06480 40022a0d207f07232832a94566ce1691 215 SUPERFAMILY SSF52166 2 207 2.49E-66 T 22-04-2016 IPR023574 Ribosomal protein L4 domain GO:0003735|GO:0005840|GO:0006412 SRM_RS06480 40022a0d207f07232832a94566ce1691 215 TIGRFAM TIGR03953 rplD_bact: 50S ribosomal protein uL4 18 204 1.5E-66 T 22-04-2016 IPR013005 50S ribosomal protein uL4 SRM_RS06480 40022a0d207f07232832a94566ce1691 215 Hamap MF_01328_B 50S ribosomal protein L4 [rplD]. 9 208 29.315 T 22-04-2016 IPR013005 50S ribosomal protein uL4 SRM_RS02245 23f3eaade88912ebfc04f05f16276e1b 358 Pfam PF08308 PEGA domain 78 143 1.6E-9 T 22-04-2016 IPR013229 PEGA SRM_RS02245 23f3eaade88912ebfc04f05f16276e1b 358 Pfam PF08308 PEGA domain 219 287 1.8E-15 T 22-04-2016 IPR013229 PEGA SRM_RS02245 23f3eaade88912ebfc04f05f16276e1b 358 Gene3D G3DSA:2.60.40.1120 246 286 2.5E-5 T 22-04-2016 IPR014766 Carboxypeptidase, regulatory domain SRM_RS02245 23f3eaade88912ebfc04f05f16276e1b 358 SUPERFAMILY SSF49452 245 285 6.67E-5 T 22-04-2016 IPR013784 Carbohydrate-binding-like fold GO:0030246 SRM_RS11040 998688aa672ea851f5ce890bc1788073 74 PANTHER PTHR34849 1 74 2.6E-20 T 22-04-2016 SRM_RS11040 998688aa672ea851f5ce890bc1788073 74 Pfam PF04255 Protein of unknown function (DUF433) 9 64 4.4E-24 T 22-04-2016 IPR007367 Protein of unknown function DUF433 SRM_RS11040 998688aa672ea851f5ce890bc1788073 74 Gene3D G3DSA:1.10.10.10 8 69 2.9E-25 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SRM_RS11040 998688aa672ea851f5ce890bc1788073 74 SUPERFAMILY SSF46689 3 67 1.49E-21 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 SRM_RS04985 d7138cd0ec48ce07b4a8d51bd005d00b 736 SUPERFAMILY SSF56935 110 735 1.04E-58 T 22-04-2016 SRM_RS04985 d7138cd0ec48ce07b4a8d51bd005d00b 736 Pfam PF00593 TonB dependent receptor 472 734 1.9E-18 T 22-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 SRM_RS04985 d7138cd0ec48ce07b4a8d51bd005d00b 736 SUPERFAMILY SSF49452 20 101 6.08E-14 T 22-04-2016 IPR013784 Carbohydrate-binding-like fold GO:0030246 SRM_RS04985 d7138cd0ec48ce07b4a8d51bd005d00b 736 Gene3D G3DSA:2.60.40.1120 27 115 1.2E-14 T 22-04-2016 IPR014766 Carboxypeptidase, regulatory domain SRM_RS04985 d7138cd0ec48ce07b4a8d51bd005d00b 736 Pfam PF13715 CarboxypepD_reg-like domain 27 113 2.6E-15 T 22-04-2016 SRM_RS04985 d7138cd0ec48ce07b4a8d51bd005d00b 736 Gene3D G3DSA:2.40.170.20 246 735 7.6E-40 T 22-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 SRM_RS02835 8941e126efd7f2119fd02003bb39ed5b 165 Pfam PF01037 Lrp/AsnC ligand binding domain 71 142 4.7E-17 T 22-04-2016 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain SRM_RS02835 8941e126efd7f2119fd02003bb39ed5b 165 Gene3D G3DSA:1.10.10.10 2 57 4.6E-19 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SRM_RS02835 8941e126efd7f2119fd02003bb39ed5b 165 PANTHER PTHR30154:SF2 1 158 1.0E-41 T 22-04-2016 SRM_RS02835 8941e126efd7f2119fd02003bb39ed5b 165 Gene3D G3DSA:3.30.70.920 58 151 9.1E-22 T 22-04-2016 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain SRM_RS02835 8941e126efd7f2119fd02003bb39ed5b 165 Pfam PF13412 Winged helix-turn-helix DNA-binding 6 52 6.6E-15 T 22-04-2016 SRM_RS02835 8941e126efd7f2119fd02003bb39ed5b 165 SUPERFAMILY SSF54909 66 150 2.28E-18 T 22-04-2016 IPR011008 Dimeric alpha-beta barrel SRM_RS02835 8941e126efd7f2119fd02003bb39ed5b 165 SMART SM00344 5 112 4.1E-28 T 22-04-2016 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 SRM_RS02835 8941e126efd7f2119fd02003bb39ed5b 165 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 21 32 1.2E-11 T 22-04-2016 IPR000485 AsnC-type HTH domain GO:0006355|GO:0043565 SRM_RS02835 8941e126efd7f2119fd02003bb39ed5b 165 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 32 51 1.2E-11 T 22-04-2016 IPR000485 AsnC-type HTH domain GO:0006355|GO:0043565 SRM_RS02835 8941e126efd7f2119fd02003bb39ed5b 165 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 5 21 1.2E-11 T 22-04-2016 IPR000485 AsnC-type HTH domain GO:0006355|GO:0043565 SRM_RS02835 8941e126efd7f2119fd02003bb39ed5b 165 SUPERFAMILY SSF46785 5 78 7.0E-16 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SRM_RS02835 8941e126efd7f2119fd02003bb39ed5b 165 PANTHER PTHR30154 1 158 1.0E-41 T 22-04-2016 SRM_RS00910 ef819233eb10ab7e8a2d6e1cc1e73c85 320 Gene3D G3DSA:3.40.50.10490 103 179 1.7E-57 T 22-04-2016 SRM_RS00910 ef819233eb10ab7e8a2d6e1cc1e73c85 320 Gene3D G3DSA:3.40.50.10490 238 317 1.7E-57 T 22-04-2016 SRM_RS00910 ef819233eb10ab7e8a2d6e1cc1e73c85 320 PANTHER PTHR12534 69 309 2.5E-102 T 22-04-2016 IPR005706 Ribosomal protein S2, bacteria/mitochondria/plastid GO:0003735|GO:0006412|GO:0015935 SRM_RS00910 ef819233eb10ab7e8a2d6e1cc1e73c85 320 ProSitePatterns PS00962 Ribosomal protein S2 signature 1. 86 97 - T 22-04-2016 IPR018130 Ribosomal protein S2, conserved site GO:0003735|GO:0005840|GO:0006412 SRM_RS00910 ef819233eb10ab7e8a2d6e1cc1e73c85 320 Pfam PF00318 Ribosomal protein S2 89 304 3.1E-87 T 22-04-2016 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SRM_RS00910 ef819233eb10ab7e8a2d6e1cc1e73c85 320 SUPERFAMILY SSF52313 86 312 2.35E-84 T 22-04-2016 IPR023591 Ribosomal protein S2, flavodoxin-like domain SRM_RS00910 ef819233eb10ab7e8a2d6e1cc1e73c85 320 Hamap MF_00291_B 30S ribosomal protein S2 [rpsB]. 82 305 38.985 T 22-04-2016 IPR005706 Ribosomal protein S2, bacteria/mitochondria/plastid GO:0003735|GO:0006412|GO:0015935 SRM_RS00910 ef819233eb10ab7e8a2d6e1cc1e73c85 320 TIGRFAM TIGR01011 rpsB_bact: ribosomal protein uS2 84 306 3.5E-94 T 22-04-2016 IPR005706 Ribosomal protein S2, bacteria/mitochondria/plastid GO:0003735|GO:0006412|GO:0015935 SRM_RS00910 ef819233eb10ab7e8a2d6e1cc1e73c85 320 Gene3D G3DSA:1.10.287.610 180 232 2.6E-21 T 22-04-2016 SRM_RS00910 ef819233eb10ab7e8a2d6e1cc1e73c85 320 PRINTS PR00395 Ribosomal protein S2 signature 276 290 2.8E-32 T 22-04-2016 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SRM_RS00910 ef819233eb10ab7e8a2d6e1cc1e73c85 320 PRINTS PR00395 Ribosomal protein S2 signature 167 184 2.8E-32 T 22-04-2016 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SRM_RS00910 ef819233eb10ab7e8a2d6e1cc1e73c85 320 PRINTS PR00395 Ribosomal protein S2 signature 238 255 2.8E-32 T 22-04-2016 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SRM_RS00910 ef819233eb10ab7e8a2d6e1cc1e73c85 320 PRINTS PR00395 Ribosomal protein S2 signature 255 266 2.8E-32 T 22-04-2016 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SRM_RS00910 ef819233eb10ab7e8a2d6e1cc1e73c85 320 PRINTS PR00395 Ribosomal protein S2 signature 86 104 2.8E-32 T 22-04-2016 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SRM_RS00910 ef819233eb10ab7e8a2d6e1cc1e73c85 320 PRINTS PR00395 Ribosomal protein S2 signature 117 126 2.8E-32 T 22-04-2016 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SRM_RS10005 df5ff6e48c8f16765981b863dfe46b69 247 Gene3D G3DSA:3.40.1160.10 6 198 5.9E-18 T 22-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 SRM_RS10005 df5ff6e48c8f16765981b863dfe46b69 247 SUPERFAMILY SSF53633 5 244 1.08E-16 T 22-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 SRM_RS10005 df5ff6e48c8f16765981b863dfe46b69 247 Pfam PF00696 Amino acid kinase family 19 189 1.2E-9 T 22-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 SRM_RS11840 8c8f6ed0de668f4e57f4d93c7882639f 213 SUPERFAMILY SSF56925 28 213 4.45E-9 T 22-04-2016 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 SRM_RS11840 8c8f6ed0de668f4e57f4d93c7882639f 213 Pfam PF13505 Outer membrane protein beta-barrel domain 13 213 5.1E-15 T 22-04-2016 IPR027385 Outer membrane protein beta-barrel SRM_RS11840 8c8f6ed0de668f4e57f4d93c7882639f 213 Gene3D G3DSA:2.40.160.20 13 210 1.4E-7 T 22-04-2016 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 SRM_RS10865 611f037bb02494f1c1305c953348dd6a 79 TIGRFAM TIGR02605 CxxC_CxxC_SSSS: putative regulatory protein, FmdB family 1 51 1.8E-10 T 22-04-2016 IPR013429 Putative regulatory protein, FmdB, Zinc ribbon domain SRM_RS10865 611f037bb02494f1c1305c953348dd6a 79 Pfam PF09723 Zinc ribbon domain 1 39 2.1E-10 T 22-04-2016 IPR013429 Putative regulatory protein, FmdB, Zinc ribbon domain SRM_RS10865 611f037bb02494f1c1305c953348dd6a 79 SMART SM00834 1 40 3.7E-9 T 22-04-2016 IPR013429 Putative regulatory protein, FmdB, Zinc ribbon domain SRM_RS02995 6d84829a4624709bc24928ec1c3da572 251 Pfam PF04397 LytTr DNA-binding domain 154 249 1.1E-20 T 22-04-2016 IPR007492 LytTR DNA-binding domain GO:0003677 SRM_RS02995 6d84829a4624709bc24928ec1c3da572 251 Gene3D G3DSA:2.40.50.40 144 212 7.6E-15 T 22-04-2016 SRM_RS02995 6d84829a4624709bc24928ec1c3da572 251 SMART SM00448 7 115 1.3E-28 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SRM_RS02995 6d84829a4624709bc24928ec1c3da572 251 Gene3D G3DSA:3.40.50.2300 7 127 4.0E-30 T 22-04-2016 SRM_RS02995 6d84829a4624709bc24928ec1c3da572 251 PANTHER PTHR26402 7 128 1.4E-32 T 22-04-2016 SRM_RS02995 6d84829a4624709bc24928ec1c3da572 251 SMART SM00850 153 250 1.0E-29 T 22-04-2016 IPR007492 LytTR DNA-binding domain GO:0003677 SRM_RS02995 6d84829a4624709bc24928ec1c3da572 251 Pfam PF00072 Response regulator receiver domain 10 116 2.1E-25 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SRM_RS02995 6d84829a4624709bc24928ec1c3da572 251 SUPERFAMILY SSF52172 7 121 1.1E-29 T 22-04-2016 IPR011006 CheY-like superfamily SRM_RS02995 6d84829a4624709bc24928ec1c3da572 251 Gene3D G3DSA:2.20.25.10 216 251 4.2E-4 T 22-04-2016 SRM_RS07930 19cb5353ab2aa2a955c8259a8cda7998 199 Pfam PF00156 Phosphoribosyl transferase domain 23 153 7.7E-14 T 22-04-2016 IPR000836 Phosphoribosyltransferase domain GO:0009116 SRM_RS07930 19cb5353ab2aa2a955c8259a8cda7998 199 Gene3D G3DSA:3.40.50.2020 10 179 1.3E-41 T 22-04-2016 IPR029057 Phosphoribosyltransferase-like SRM_RS07930 19cb5353ab2aa2a955c8259a8cda7998 199 Hamap MF_01219 Bifunctional protein PyrR [pyrR]. 8 187 31.009 T 22-04-2016 IPR023050 Bifunctional protein PyrR KEGG: 00240+2.4.2.9|MetaCyc: PWY-7183 SRM_RS07930 19cb5353ab2aa2a955c8259a8cda7998 199 SUPERFAMILY SSF53271 10 180 1.06E-37 T 22-04-2016 IPR029057 Phosphoribosyltransferase-like SRM_RS07930 19cb5353ab2aa2a955c8259a8cda7998 199 PANTHER PTHR11608 5 189 1.7E-64 T 22-04-2016 SRM_RS12915 c96689df7cb5529523ff746cb0a5297a 556 SUPERFAMILY SSF49384 30 141 2.42E-6 T 22-04-2016 IPR008965 Carbohydrate-binding domain GO:0030246 SRM_RS12915 c96689df7cb5529523ff746cb0a5297a 556 Pfam PF00963 Cohesin domain 33 131 2.1E-5 T 22-04-2016 IPR002102 Cellulosome anchoring protein, cohesin domain GO:0000272|GO:0030246 SRM_RS12915 c96689df7cb5529523ff746cb0a5297a 556 Gene3D G3DSA:2.60.40.680 29 133 1.5E-5 T 22-04-2016 IPR002102 Cellulosome anchoring protein, cohesin domain GO:0000272|GO:0030246 SRM_RS12915 c96689df7cb5529523ff746cb0a5297a 556 TIGRFAM TIGR04183 Por_Secre_tail: Por secretion system C-terminal sorting domain 478 554 8.0E-10 T 22-04-2016 IPR026444 Secretion system C-terminal sorting domain SRM_RS12445 13bbad5080e8604f2a4caa767d4e263f 235 ProSitePatterns PS00211 ABC transporters family signature. 145 159 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 SRM_RS12445 13bbad5080e8604f2a4caa767d4e263f 235 Pfam PF00005 ABC transporter 27 172 1.0E-32 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 SRM_RS12445 13bbad5080e8604f2a4caa767d4e263f 235 PANTHER PTHR24220 8 230 1.1E-94 T 22-04-2016 SRM_RS12445 13bbad5080e8604f2a4caa767d4e263f 235 PANTHER PTHR24220:SF578 8 230 1.1E-94 T 22-04-2016 SRM_RS12445 13bbad5080e8604f2a4caa767d4e263f 235 SUPERFAMILY SSF52540 6 230 4.31E-70 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SRM_RS12445 13bbad5080e8604f2a4caa767d4e263f 235 SMART SM00382 35 220 3.6E-14 T 22-04-2016 IPR003593 AAA+ ATPase domain SRM_RS12445 13bbad5080e8604f2a4caa767d4e263f 235 Gene3D G3DSA:3.40.50.300 6 229 4.0E-71 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SRM_RS08310 1a5a8b4f3e56b855d43f46963e0348cf 284 PANTHER PTHR23309 1 284 3.0E-135 T 22-04-2016 SRM_RS08310 1a5a8b4f3e56b855d43f46963e0348cf 284 ProSitePatterns PS00067 3-hydroxyacyl-CoA dehydrogenase signature. 184 209 - T 22-04-2016 IPR006180 3-hydroxyacyl-CoA dehydrogenase, conserved site GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+5.1.2.3+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+5.1.2.3+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7726|UniPathway: UPA00659 SRM_RS08310 1a5a8b4f3e56b855d43f46963e0348cf 284 SUPERFAMILY SSF48179 186 284 1.19E-34 T 22-04-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 SRM_RS08310 1a5a8b4f3e56b855d43f46963e0348cf 284 SUPERFAMILY SSF51735 2 186 4.52E-56 T 22-04-2016 IPR016040 NAD(P)-binding domain SRM_RS08310 1a5a8b4f3e56b855d43f46963e0348cf 284 Gene3D G3DSA:3.40.50.720 3 188 3.3E-60 T 22-04-2016 IPR016040 NAD(P)-binding domain SRM_RS08310 1a5a8b4f3e56b855d43f46963e0348cf 284 Gene3D G3DSA:1.10.1040.10 189 284 1.6E-37 T 22-04-2016 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 SRM_RS08310 1a5a8b4f3e56b855d43f46963e0348cf 284 PIRSF PIRSF000105 1 284 5.7E-92 T 22-04-2016 IPR022694 3-hydroxyacyl-CoA dehydrogenase GO:0003857|GO:0006631|GO:0055114|GO:0070403 SRM_RS08310 1a5a8b4f3e56b855d43f46963e0348cf 284 Pfam PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain 187 283 1.2E-36 T 22-04-2016 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7726|UniPathway: UPA00659 SRM_RS08310 1a5a8b4f3e56b855d43f46963e0348cf 284 Pfam PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain 6 184 2.8E-61 T 22-04-2016 IPR006176 3-hydroxyacyl-CoA dehydrogenase, NAD binding GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7726|UniPathway: UPA00659 SRM_RS14805 4db92aea1d2d78df5e572afa61698d2b 462 Hamap MF_00303 Trigger factor [tig]. 1 440 16.851 T 22-04-2016 IPR005215 Trigger factor GO:0015031 SRM_RS14805 4db92aea1d2d78df5e572afa61698d2b 462 Gene3D G3DSA:3.30.70.1050 1 119 1.9E-25 T 22-04-2016 IPR008881 Trigger factor, ribosome-binding, bacterial GO:0006457|GO:0015031 SRM_RS14805 4db92aea1d2d78df5e572afa61698d2b 462 SUPERFAMILY SSF102735 1 130 1.83E-28 T 22-04-2016 IPR008881 Trigger factor, ribosome-binding, bacterial GO:0006457|GO:0015031 SRM_RS14805 4db92aea1d2d78df5e572afa61698d2b 462 SUPERFAMILY SSF54534 133 259 1.12E-13 T 22-04-2016 SRM_RS14805 4db92aea1d2d78df5e572afa61698d2b 462 PIRSF PIRSF003095 1 453 1.4E-74 T 22-04-2016 IPR005215 Trigger factor GO:0015031 SRM_RS14805 4db92aea1d2d78df5e572afa61698d2b 462 Gene3D G3DSA:1.10.3120.10 207 396 3.7E-35 T 22-04-2016 IPR008880 Trigger factor, C-terminal GO:0006457|GO:0015031 SRM_RS14805 4db92aea1d2d78df5e572afa61698d2b 462 Pfam PF05697 Bacterial trigger factor protein (TF) 1 145 9.0E-33 T 22-04-2016 IPR008881 Trigger factor, ribosome-binding, bacterial GO:0006457|GO:0015031 SRM_RS14805 4db92aea1d2d78df5e572afa61698d2b 462 SUPERFAMILY SSF109998 261 440 3.92E-29 T 22-04-2016 IPR027304 Trigger factor/SurA domain SRM_RS14805 4db92aea1d2d78df5e572afa61698d2b 462 TIGRFAM TIGR00115 tig: trigger factor 13 429 7.4E-86 T 22-04-2016 IPR005215 Trigger factor GO:0015031 SRM_RS14805 4db92aea1d2d78df5e572afa61698d2b 462 Pfam PF05698 Bacterial trigger factor protein (TF) C-terminus 277 430 3.9E-25 T 22-04-2016 IPR008880 Trigger factor, C-terminal GO:0006457|GO:0015031 SRM_RS14805 4db92aea1d2d78df5e572afa61698d2b 462 PANTHER PTHR30560 1 449 6.4E-47 T 22-04-2016 SRM_RS11090 1f84a48295d9d054267e44391fac55a1 485 SUPERFAMILY SSF51161 260 436 9.63E-15 T 22-04-2016 IPR011004 Trimeric LpxA-like SRM_RS11090 1f84a48295d9d054267e44391fac55a1 485 PANTHER PTHR22572 255 432 3.0E-34 T 22-04-2016 SRM_RS11090 1f84a48295d9d054267e44391fac55a1 485 Gene3D G3DSA:2.160.10.10 246 431 6.2E-12 T 22-04-2016 SRM_RS11090 1f84a48295d9d054267e44391fac55a1 485 TIGRFAM TIGR03991 alt_bact_glmU: UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase 57 473 8.2E-140 T 22-04-2016 IPR023917 UDP-GlcNAc diphosphorylase/GlcNAc-1-P N-acetyltransferase, GlmU, bacterial-type SRM_RS11090 1f84a48295d9d054267e44391fac55a1 485 Pfam PF13562 Sugar nucleotidyl transferase 59 230 1.7E-22 T 22-04-2016 IPR023917 UDP-GlcNAc diphosphorylase/GlcNAc-1-P N-acetyltransferase, GlmU, bacterial-type SRM_RS11090 1f84a48295d9d054267e44391fac55a1 485 PANTHER PTHR22572:SF99 255 432 3.0E-34 T 22-04-2016 SRM_RS05765 1798deb61e7954141543db7be20886d1 507 PANTHER PTHR11616 430 503 3.6E-146 T 22-04-2016 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 SRM_RS05765 1798deb61e7954141543db7be20886d1 507 SUPERFAMILY SSF161070 59 503 1.44E-132 T 22-04-2016 SRM_RS05765 1798deb61e7954141543db7be20886d1 507 PANTHER PTHR11616:SF167 56 405 3.6E-146 T 22-04-2016 SRM_RS05765 1798deb61e7954141543db7be20886d1 507 PANTHER PTHR11616:SF167 430 503 3.6E-146 T 22-04-2016 SRM_RS05765 1798deb61e7954141543db7be20886d1 507 PRINTS PR00176 Sodium/chloride neurotransmitter symporter signature 143 169 1.7E-14 T 22-04-2016 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 SRM_RS05765 1798deb61e7954141543db7be20886d1 507 PRINTS PR00176 Sodium/chloride neurotransmitter symporter signature 441 461 1.7E-14 T 22-04-2016 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 SRM_RS05765 1798deb61e7954141543db7be20886d1 507 PRINTS PR00176 Sodium/chloride neurotransmitter symporter signature 67 88 1.7E-14 T 22-04-2016 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 SRM_RS05765 1798deb61e7954141543db7be20886d1 507 Pfam PF00209 Sodium:neurotransmitter symporter family 59 172 3.8E-25 T 22-04-2016 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 SRM_RS05765 1798deb61e7954141543db7be20886d1 507 Pfam PF00209 Sodium:neurotransmitter symporter family 196 500 2.0E-32 T 22-04-2016 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 SRM_RS05765 1798deb61e7954141543db7be20886d1 507 PANTHER PTHR11616 56 405 3.6E-146 T 22-04-2016 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 SRM_RS15535 f34c3b6d084faeaa1b863f37c027348f 76 TIGRFAM TIGR02609 doc_partner: putative addiction module antidote 6 75 3.4E-18 T 22-04-2016 IPR013432 Putative addiction module antidote SRM_RS15535 f34c3b6d084faeaa1b863f37c027348f 76 SUPERFAMILY SSF89447 4 65 1.92E-15 T 22-04-2016 SRM_RS15535 f34c3b6d084faeaa1b863f37c027348f 76 Pfam PF04014 Antidote-toxin recognition MazE, bacterial antitoxin 8 50 4.1E-7 T 22-04-2016 IPR007159 SpoVT-AbrB domain GO:0003677 SRM_RS15535 f34c3b6d084faeaa1b863f37c027348f 76 Gene3D G3DSA:2.10.260.10 4 61 1.1E-13 T 22-04-2016 SRM_RS15535 f34c3b6d084faeaa1b863f37c027348f 76 SMART SM00966 8 53 2.4E-10 T 22-04-2016 IPR007159 SpoVT-AbrB domain GO:0003677 SRM_RS09830 e665e8175695e567f99a3562424711f7 336 SUPERFAMILY SSF53474 78 296 1.22E-25 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold SRM_RS09830 e665e8175695e567f99a3562424711f7 336 PANTHER PTHR11440:SF45 106 192 1.5E-16 T 22-04-2016 SRM_RS09830 e665e8175695e567f99a3562424711f7 336 PANTHER PTHR11440:SF45 219 301 1.5E-16 T 22-04-2016 SRM_RS09830 e665e8175695e567f99a3562424711f7 336 Gene3D G3DSA:3.40.50.1820 78 334 6.6E-46 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold SRM_RS09830 e665e8175695e567f99a3562424711f7 336 Pfam PF07819 PGAP1-like protein 142 187 1.5E-6 T 22-04-2016 IPR012908 GPI inositol-deacylase PGAP1-like GO:0016788 SRM_RS09830 e665e8175695e567f99a3562424711f7 336 PANTHER PTHR11440 106 192 1.5E-16 T 22-04-2016 SRM_RS09830 e665e8175695e567f99a3562424711f7 336 PANTHER PTHR11440 219 301 1.5E-16 T 22-04-2016 SRM_RS02575 0312b9ca9b33ff84f40bb532db2d0c9a 249 Pfam PF02535 ZIP Zinc transporter 91 222 3.9E-13 T 22-04-2016 IPR003689 Zinc/iron permease GO:0016020|GO:0030001|GO:0046873|GO:0055085 SRM_RS02575 0312b9ca9b33ff84f40bb532db2d0c9a 249 PANTHER PTHR11040 9 249 2.7E-85 T 22-04-2016 SRM_RS02575 0312b9ca9b33ff84f40bb532db2d0c9a 249 PANTHER PTHR11040:SF68 9 249 2.7E-85 T 22-04-2016 SRM_RS10975 79dcb2716edf405fde0972b436d855dc 376 SUPERFAMILY SSF50956 89 304 2.22E-6 T 22-04-2016 SRM_RS01225 b7575d545a78fa98d1406c5bf091a378 380 Pfam PF11376 Protein of unknown function (DUF3179) 58 373 3.7E-86 T 22-04-2016 IPR021516 Protein of unknown function DUF3179 SRM_RS10095 4a4af5b4ce7a178d50f976f47055d919 505 PANTHER PTHR11014:SF16 1 495 9.7E-139 T 22-04-2016 SRM_RS10095 4a4af5b4ce7a178d50f976f47055d919 505 Gene3D G3DSA:3.30.70.360 338 389 2.0E-17 T 22-04-2016 IPR011650 Peptidase M20, dimerisation domain SRM_RS10095 4a4af5b4ce7a178d50f976f47055d919 505 Gene3D G3DSA:3.30.70.360 256 295 2.0E-17 T 22-04-2016 IPR011650 Peptidase M20, dimerisation domain SRM_RS10095 4a4af5b4ce7a178d50f976f47055d919 505 SUPERFAMILY SSF53187 401 489 1.61E-48 T 22-04-2016 SRM_RS10095 4a4af5b4ce7a178d50f976f47055d919 505 SUPERFAMILY SSF53187 52 231 1.61E-48 T 22-04-2016 SRM_RS10095 4a4af5b4ce7a178d50f976f47055d919 505 SUPERFAMILY SSF55031 247 288 2.62E-10 T 22-04-2016 IPR011650 Peptidase M20, dimerisation domain SRM_RS10095 4a4af5b4ce7a178d50f976f47055d919 505 SUPERFAMILY SSF55031 339 389 2.62E-10 T 22-04-2016 IPR011650 Peptidase M20, dimerisation domain SRM_RS10095 4a4af5b4ce7a178d50f976f47055d919 505 Gene3D G3DSA:3.40.630.10 427 490 9.0E-53 T 22-04-2016 SRM_RS10095 4a4af5b4ce7a178d50f976f47055d919 505 Gene3D G3DSA:3.40.630.10 56 255 9.0E-53 T 22-04-2016 SRM_RS10095 4a4af5b4ce7a178d50f976f47055d919 505 Pfam PF01546 Peptidase family M20/M25/M40 123 489 3.8E-38 T 22-04-2016 IPR002933 Peptidase M20 GO:0008152|GO:0016787 SRM_RS10095 4a4af5b4ce7a178d50f976f47055d919 505 Pfam PF07687 Peptidase dimerisation domain 245 386 2.3E-16 T 22-04-2016 IPR011650 Peptidase M20, dimerisation domain SRM_RS10095 4a4af5b4ce7a178d50f976f47055d919 505 PANTHER PTHR11014 1 495 9.7E-139 T 22-04-2016 SRM_RS05435 0d7ddd3c054bfa9a20066c1c9412b0cb 161 Gene3D G3DSA:3.40.930.10 4 155 4.6E-39 T 22-04-2016 IPR002178 PTS EIIA type-2 domain KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- SRM_RS05435 0d7ddd3c054bfa9a20066c1c9412b0cb 161 PANTHER PTHR30505 5 161 1.9E-32 T 22-04-2016 SRM_RS05435 0d7ddd3c054bfa9a20066c1c9412b0cb 161 Pfam PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 12 154 5.2E-33 T 22-04-2016 IPR002178 PTS EIIA type-2 domain KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- SRM_RS05435 0d7ddd3c054bfa9a20066c1c9412b0cb 161 SUPERFAMILY SSF55804 8 153 1.2E-34 T 22-04-2016 IPR016152 Phosphotransferase/anion transporter GO:0005215|GO:0006810 Reactome: REACT_15518 SRM_RS05435 0d7ddd3c054bfa9a20066c1c9412b0cb 161 PANTHER PTHR30505:SF5 5 161 1.9E-32 T 22-04-2016 SRM_RS05940 43487e8f91f48dbac76831e95b5605c0 143 PANTHER PTHR33303 8 142 3.0E-35 T 22-04-2016 SRM_RS05940 43487e8f91f48dbac76831e95b5605c0 143 Gene3D G3DSA:3.40.50.720 9 141 3.7E-41 T 22-04-2016 IPR016040 NAD(P)-binding domain SRM_RS05940 43487e8f91f48dbac76831e95b5605c0 143 SUPERFAMILY SSF51735 8 140 1.58E-34 T 22-04-2016 IPR016040 NAD(P)-binding domain SRM_RS05940 43487e8f91f48dbac76831e95b5605c0 143 SMART SM00881 13 112 3.3E-17 T 22-04-2016 IPR003781 CoA-binding GO:0048037 SRM_RS05940 43487e8f91f48dbac76831e95b5605c0 143 Pfam PF13380 CoA binding domain 18 138 3.1E-37 T 22-04-2016 IPR003781 CoA-binding GO:0048037 SRM_RS13320 0e5fb5928729af876f6b8aeb91bf5a2b 366 SUPERFAMILY SSF51395 1 364 4.89E-92 T 22-04-2016 SRM_RS13320 0e5fb5928729af876f6b8aeb91bf5a2b 366 TIGRFAM TIGR01036 pyrD_sub2: dihydroorotate dehydrogenase (fumarate) 2 365 5.4E-103 T 22-04-2016 IPR005719 Dihydroorotate dehydrogenase, class 2 GO:0004152|GO:0006207|GO:0016020|GO:0055114 KEGG: 00240+1.3.5.2|MetaCyc: PWY-5686|UniPathway: UPA00070 SRM_RS13320 0e5fb5928729af876f6b8aeb91bf5a2b 366 Pfam PF01180 Dihydroorotate dehydrogenase 47 350 3.8E-81 T 22-04-2016 IPR005720 Dihydroorotate dehydrogenase domain GO:0005737|GO:0016627|GO:0055114 SRM_RS13320 0e5fb5928729af876f6b8aeb91bf5a2b 366 ProSitePatterns PS00912 Dihydroorotate dehydrogenase signature 2. 302 322 - T 22-04-2016 IPR001295 Dihydroorotate dehydrogenase, conserved site GO:0004152|GO:0006207|GO:0055114 SRM_RS13320 0e5fb5928729af876f6b8aeb91bf5a2b 366 PANTHER PTHR11938 1 365 1.6E-74 T 22-04-2016 SRM_RS13320 0e5fb5928729af876f6b8aeb91bf5a2b 366 Gene3D G3DSA:3.20.20.70 1 365 1.9E-118 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 SRM_RS13620 9dbd34b3e207fe9e68bf0aa0f26047b0 314 SUPERFAMILY SSF49329 55 161 4.25E-7 T 22-04-2016 IPR001424 Superoxide dismutase, copper/zinc binding domain GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 SRM_RS01030 a97de4068fb45d12894c1ef281644e5d 285 Pfam PF12773 Double zinc ribbon 234 277 2.4E-7 T 22-04-2016 IPR025874 Double zinc ribbon SRM_RS09975 618dc4924633d325259b21bec19944fa 352 Gene3D G3DSA:3.40.630.10 25 199 2.3E-18 T 22-04-2016 SRM_RS09975 618dc4924633d325259b21bec19944fa 352 Pfam PF00246 Zinc carboxypeptidase 30 148 7.6E-11 T 22-04-2016 IPR000834 Peptidase M14, carboxypeptidase A GO:0004181|GO:0006508|GO:0008270 SRM_RS09975 618dc4924633d325259b21bec19944fa 352 SUPERFAMILY SSF53187 18 236 1.75E-24 T 22-04-2016 SRM_RS13355 bbb3e15deca2325e5a4447691f92cb76 140 PANTHER PTHR31503:SF17 1 132 4.3E-41 T 22-04-2016 SRM_RS13355 bbb3e15deca2325e5a4447691f92cb76 140 Pfam PF03733 Inner membrane component domain 76 126 1.7E-18 T 22-04-2016 IPR005185 Inner membrane component domain SRM_RS13355 bbb3e15deca2325e5a4447691f92cb76 140 Pfam PF03733 Inner membrane component domain 4 54 3.0E-16 T 22-04-2016 IPR005185 Inner membrane component domain SRM_RS13355 bbb3e15deca2325e5a4447691f92cb76 140 PIRSF PIRSF028777 1 138 9.4E-52 T 22-04-2016 IPR031308 Uncharacterised conserved protein UCP028777 SRM_RS13355 bbb3e15deca2325e5a4447691f92cb76 140 PANTHER PTHR31503 1 132 4.3E-41 T 22-04-2016 SRM_RS11850 3a008aaae2af15318d18655e3f57661b 216 SMART SM00849 12 194 4.9E-33 T 22-04-2016 IPR001279 Metallo-beta-lactamase SRM_RS11850 3a008aaae2af15318d18655e3f57661b 216 PANTHER PTHR11935 1 215 1.9E-56 T 22-04-2016 SRM_RS11850 3a008aaae2af15318d18655e3f57661b 216 Pfam PF00753 Metallo-beta-lactamase superfamily 12 194 2.0E-23 T 22-04-2016 IPR001279 Metallo-beta-lactamase SRM_RS11850 3a008aaae2af15318d18655e3f57661b 216 Gene3D G3DSA:3.60.15.10 1 211 2.3E-48 T 22-04-2016 IPR001279 Metallo-beta-lactamase SRM_RS11850 3a008aaae2af15318d18655e3f57661b 216 SUPERFAMILY SSF56281 10 209 2.88E-48 T 22-04-2016 IPR001279 Metallo-beta-lactamase SRM_RS11850 3a008aaae2af15318d18655e3f57661b 216 PANTHER PTHR11935:SF115 1 215 1.9E-56 T 22-04-2016 SRM_RS12410 9d133c4ad214475f76f5a328232ab2d6 409 SUPERFAMILY SSF48452 247 299 1.23E-8 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 SRM_RS12410 9d133c4ad214475f76f5a328232ab2d6 409 SUPERFAMILY SSF48452 118 202 1.23E-8 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 SRM_RS12410 9d133c4ad214475f76f5a328232ab2d6 409 Gene3D G3DSA:1.25.40.10 165 212 3.1E-10 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 SRM_RS12410 9d133c4ad214475f76f5a328232ab2d6 409 Gene3D G3DSA:1.25.40.10 255 407 3.1E-10 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 SRM_RS12410 9d133c4ad214475f76f5a328232ab2d6 409 SUPERFAMILY SSF48452 269 390 4.11E-10 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 SRM_RS10730 19581cffacb7df5d0061c471ccb43e28 332 ProSitePatterns PS00444 Polyprenyl synthases signature 2. 211 223 - T 22-04-2016 IPR000092 Polyprenyl synthetase GO:0008299 SRM_RS10730 19581cffacb7df5d0061c471ccb43e28 332 Pfam PF00348 Polyprenyl synthetase 36 266 8.3E-58 T 22-04-2016 IPR000092 Polyprenyl synthetase GO:0008299 SRM_RS10730 19581cffacb7df5d0061c471ccb43e28 332 ProSitePatterns PS00723 Polyprenyl synthases signature 1. 86 100 - T 22-04-2016 IPR000092 Polyprenyl synthetase GO:0008299 SRM_RS10730 19581cffacb7df5d0061c471ccb43e28 332 SUPERFAMILY SSF48576 29 330 2.24E-81 T 22-04-2016 IPR008949 Isoprenoid synthase domain SRM_RS10730 19581cffacb7df5d0061c471ccb43e28 332 PANTHER PTHR12001 11 332 3.2E-87 T 22-04-2016 IPR017446 Polyprenyl synthetase-related SRM_RS10730 19581cffacb7df5d0061c471ccb43e28 332 PANTHER PTHR12001:SF23 11 332 3.2E-87 T 22-04-2016 SRM_RS10730 19581cffacb7df5d0061c471ccb43e28 332 Gene3D G3DSA:1.10.600.10 12 330 7.3E-87 T 22-04-2016 IPR008949 Isoprenoid synthase domain SRM_RS07895 c90b1e835eace97a54421c35367d6e6a 389 Pfam PF17186 Lipocalin-like domain 254 380 2.8E-47 T 22-04-2016 IPR033451 AttH, lipocalin-like domain SRM_RS07895 c90b1e835eace97a54421c35367d6e6a 389 Gene3D G3DSA:2.40.370.10 62 252 1.4E-68 T 22-04-2016 IPR023374 AttH-like domain SRM_RS07895 c90b1e835eace97a54421c35367d6e6a 389 Pfam PF07143 CrtC N-terminal lipocalin domain 74 251 4.2E-60 T 22-04-2016 IPR010791 AttH domain SRM_RS07895 c90b1e835eace97a54421c35367d6e6a 389 PANTHER PTHR38591 1 385 7.9E-113 T 22-04-2016 SRM_RS07895 c90b1e835eace97a54421c35367d6e6a 389 Gene3D G3DSA:2.40.370.10 256 380 2.3E-44 T 22-04-2016 IPR023374 AttH-like domain SRM_RS07895 c90b1e835eace97a54421c35367d6e6a 389 SUPERFAMILY SSF159245 51 380 4.84E-106 T 22-04-2016 SRM_RS02775 1fecb6f27616ed8ef6e93851e71b6ef2 979 Gene3D G3DSA:3.20.20.300 71 408 6.2E-100 T 22-04-2016 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 SRM_RS02775 1fecb6f27616ed8ef6e93851e71b6ef2 979 PANTHER PTHR30480:SF5 53 595 5.0E-140 T 22-04-2016 SRM_RS02775 1fecb6f27616ed8ef6e93851e71b6ef2 979 Pfam PF01915 Glycosyl hydrolase family 3 C-terminal domain 423 592 8.3E-11 T 22-04-2016 IPR002772 Glycoside hydrolase family 3 C-terminal domain GO:0004553|GO:0005975 SRM_RS02775 1fecb6f27616ed8ef6e93851e71b6ef2 979 SUPERFAMILY SSF52279 422 589 7.72E-12 T 22-04-2016 IPR002772 Glycoside hydrolase family 3 C-terminal domain GO:0004553|GO:0005975 SRM_RS02775 1fecb6f27616ed8ef6e93851e71b6ef2 979 Pfam PF00933 Glycosyl hydrolase family 3 N terminal domain 65 384 3.7E-90 T 22-04-2016 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 SRM_RS02775 1fecb6f27616ed8ef6e93851e71b6ef2 979 Gene3D G3DSA:3.40.50.1700 409 592 3.7E-17 T 22-04-2016 IPR002772 Glycoside hydrolase family 3 C-terminal domain GO:0004553|GO:0005975 SRM_RS02775 1fecb6f27616ed8ef6e93851e71b6ef2 979 PANTHER PTHR30480 53 595 5.0E-140 T 22-04-2016 SRM_RS02775 1fecb6f27616ed8ef6e93851e71b6ef2 979 SUPERFAMILY SSF51445 54 421 3.26E-99 T 22-04-2016 IPR017853 Glycoside hydrolase superfamily SRM_RS02775 1fecb6f27616ed8ef6e93851e71b6ef2 979 ProSitePatterns PS00775 Glycosyl hydrolases family 3 active site. 305 322 - T 22-04-2016 IPR019800 Glycoside hydrolase, family 3, active site GO:0004553|GO:0005975 SRM_RS02775 1fecb6f27616ed8ef6e93851e71b6ef2 979 PRINTS PR00133 Glycosyl hydrolase family 3 signature 305 323 4.7E-6 T 22-04-2016 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 SRM_RS02775 1fecb6f27616ed8ef6e93851e71b6ef2 979 PRINTS PR00133 Glycosyl hydrolase family 3 signature 228 244 4.7E-6 T 22-04-2016 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 SRM_RS02775 1fecb6f27616ed8ef6e93851e71b6ef2 979 PRINTS PR00133 Glycosyl hydrolase family 3 signature 150 169 4.7E-6 T 22-04-2016 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 SRM_RS02775 1fecb6f27616ed8ef6e93851e71b6ef2 979 SUPERFAMILY SSF56601 613 950 2.94E-88 T 22-04-2016 IPR012338 Beta-lactamase/transpeptidase-like SRM_RS02775 1fecb6f27616ed8ef6e93851e71b6ef2 979 Pfam PF00144 Beta-lactamase 623 953 6.3E-70 T 22-04-2016 IPR001466 Beta-lactamase-related SRM_RS02775 1fecb6f27616ed8ef6e93851e71b6ef2 979 Gene3D G3DSA:3.40.710.10 608 951 1.6E-88 T 22-04-2016 IPR012338 Beta-lactamase/transpeptidase-like SRM_RS05510 111969e191360d6de920cb3677755d4e 943 SUPERFAMILY SSF52317 741 933 5.27E-13 T 22-04-2016 IPR029062 Class I glutamine amidotransferase-like SRM_RS05510 111969e191360d6de920cb3677755d4e 943 Gene3D G3DSA:3.40.630.10 121 324 9.0E-26 T 22-04-2016 SRM_RS05510 111969e191360d6de920cb3677755d4e 943 Pfam PF00246 Zinc carboxypeptidase 126 299 3.9E-20 T 22-04-2016 IPR000834 Peptidase M14, carboxypeptidase A GO:0004181|GO:0006508|GO:0008270 SRM_RS05510 111969e191360d6de920cb3677755d4e 943 SMART SM00631 118 372 0.0013 T 22-04-2016 IPR000834 Peptidase M14, carboxypeptidase A GO:0004181|GO:0006508|GO:0008270 SRM_RS05510 111969e191360d6de920cb3677755d4e 943 SUPERFAMILY SSF53187 110 160 9.11E-45 T 22-04-2016 SRM_RS05510 111969e191360d6de920cb3677755d4e 943 SUPERFAMILY SSF53187 192 403 9.11E-45 T 22-04-2016 SRM_RS02825 6e2c165ebc0cc890359dcd2b0359030b 397 Gene3D G3DSA:3.40.640.10 62 278 2.6E-85 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 SRM_RS02825 6e2c165ebc0cc890359dcd2b0359030b 397 Gene3D G3DSA:3.90.1150.10 279 392 2.6E-32 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 SRM_RS02825 6e2c165ebc0cc890359dcd2b0359030b 397 SUPERFAMILY SSF53383 7 395 1.45E-120 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase SRM_RS02825 6e2c165ebc0cc890359dcd2b0359030b 397 TIGRFAM TIGR01822 2am3keto_CoA: glycine C-acetyltransferase 11 397 1.2E-193 T 22-04-2016 IPR011282 2-amino-3-ketobutyrate coenzyme A ligase GO:0006567|GO:0008890 KEGG: 00260+2.3.1.29|UniPathway: UPA00046 SRM_RS02825 6e2c165ebc0cc890359dcd2b0359030b 397 Hamap MF_00985 2-amino-3-ketobutyrate coenzyme A ligase [kbl]. 4 395 52.287 T 22-04-2016 IPR011282 2-amino-3-ketobutyrate coenzyme A ligase GO:0006567|GO:0008890 KEGG: 00260+2.3.1.29|UniPathway: UPA00046 SRM_RS02825 6e2c165ebc0cc890359dcd2b0359030b 397 Pfam PF00155 Aminotransferase class I and II 45 387 4.9E-69 T 22-04-2016 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 SRM_RS04965 3a7c6f79c5f9162e3e6420d5d49d8695 379 PANTHER PTHR34220 39 379 3.1E-63 T 22-04-2016 SRM_RS04965 3a7c6f79c5f9162e3e6420d5d49d8695 379 SUPERFAMILY SSF55874 234 372 1.11E-12 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SRM_RS04965 3a7c6f79c5f9162e3e6420d5d49d8695 379 Gene3D G3DSA:3.30.565.10 230 373 1.8E-12 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SRM_RS04965 3a7c6f79c5f9162e3e6420d5d49d8695 379 Pfam PF06580 Histidine kinase 180 258 3.4E-28 T 22-04-2016 IPR010559 Signal transduction histidine kinase, internal region GO:0000155|GO:0000160|GO:0016021 SRM_RS08885 e19ceaf3435f76f2788b2924e1566e92 367 Pfam PF01761 3-dehydroquinate synthase 73 330 1.0E-92 T 22-04-2016 IPR030960 3-dehydroquinate synthase domain KEGG: 00400+4.2.3.4|MetaCyc: PWY-6164|UniPathway: UPA00053 SRM_RS08885 e19ceaf3435f76f2788b2924e1566e92 367 TIGRFAM TIGR01357 aroB: 3-dehydroquinate synthase 36 359 3.0E-108 T 22-04-2016 IPR016037 3-dehydroquinate synthase AroB GO:0003856|GO:0005737|GO:0009073 KEGG: 00400+4.2.3.4|MetaCyc: PWY-6164|UniPathway: UPA00053 SRM_RS08885 e19ceaf3435f76f2788b2924e1566e92 367 Gene3D G3DSA:3.40.50.1970 10 178 3.1E-60 T 22-04-2016 SRM_RS08885 e19ceaf3435f76f2788b2924e1566e92 367 PANTHER PTHR21090 2 355 2.4E-142 T 22-04-2016 SRM_RS08885 e19ceaf3435f76f2788b2924e1566e92 367 PIRSF PIRSF001455 12 365 8.2E-102 T 22-04-2016 IPR030963 3-dehydroquinate synthase family GO:0009073|GO:0016838 KEGG: 00400+4.2.3.4|MetaCyc: PWY-6164|UniPathway: UPA00053 SRM_RS08885 e19ceaf3435f76f2788b2924e1566e92 367 Hamap MF_00110 3-dehydroquinate synthase [aroB]. 8 363 38.118 T 22-04-2016 IPR016037 3-dehydroquinate synthase AroB GO:0003856|GO:0005737|GO:0009073 KEGG: 00400+4.2.3.4|MetaCyc: PWY-6164|UniPathway: UPA00053 SRM_RS08885 e19ceaf3435f76f2788b2924e1566e92 367 Gene3D G3DSA:1.20.1090.10 179 361 2.4E-56 T 22-04-2016 SRM_RS08885 e19ceaf3435f76f2788b2924e1566e92 367 SUPERFAMILY SSF56796 17 360 5.36E-99 T 22-04-2016 SRM_RS15085 b72f3d5037ef395be3206728a02ddfb4 273 Gene3D G3DSA:3.40.50.300 3 233 1.5E-58 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SRM_RS15085 b72f3d5037ef395be3206728a02ddfb4 273 SMART SM00382 26 219 4.8E-13 T 22-04-2016 IPR003593 AAA+ ATPase domain SRM_RS15085 b72f3d5037ef395be3206728a02ddfb4 273 Pfam PF00005 ABC transporter 18 171 5.0E-26 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 SRM_RS15085 b72f3d5037ef395be3206728a02ddfb4 273 SUPERFAMILY SSF52540 2 233 5.09E-55 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SRM_RS10695 b25ba536f52b0058db096fdbc013f6dc 134 Gene3D G3DSA:1.10.1660.10 34 132 1.7E-17 T 22-04-2016 SRM_RS10695 b25ba536f52b0058db096fdbc013f6dc 134 PANTHER PTHR30204 26 134 7.4E-22 T 22-04-2016 SRM_RS10695 b25ba536f52b0058db096fdbc013f6dc 134 PANTHER PTHR30204:SF15 26 134 7.4E-22 T 22-04-2016 SRM_RS10695 b25ba536f52b0058db096fdbc013f6dc 134 Pfam PF13411 MerR HTH family regulatory protein 34 102 1.8E-21 T 22-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 SRM_RS10695 b25ba536f52b0058db096fdbc013f6dc 134 SUPERFAMILY SSF46955 34 133 1.51E-17 T 22-04-2016 IPR009061 Putative DNA-binding domain SRM_RS10695 b25ba536f52b0058db096fdbc013f6dc 134 SMART SM00422 34 104 1.7E-6 T 22-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 SRM_RS08180 6cbef0f91a7b283525f79f0be909a55f 487 PANTHER PTHR30508 39 482 7.9E-116 T 22-04-2016 SRM_RS08180 6cbef0f91a7b283525f79f0be909a55f 487 PANTHER PTHR30508:SF0 39 482 7.9E-116 T 22-04-2016 SRM_RS08180 6cbef0f91a7b283525f79f0be909a55f 487 SUPERFAMILY SSF101960 68 482 3.01E-103 T 22-04-2016 SRM_RS08180 6cbef0f91a7b283525f79f0be909a55f 487 Pfam PF01458 Uncharacterized protein family (UPF0051) 234 457 4.9E-69 T 22-04-2016 IPR000825 SUF system FeS cluster assembly, SufBD GO:0016226 SRM_RS08180 6cbef0f91a7b283525f79f0be909a55f 487 TIGRFAM TIGR01981 sufD: FeS assembly protein SufD 199 473 1.8E-75 T 22-04-2016 IPR011542 SUF system FeS cluster assembly, SufD GO:0016226 SRM_RS10560 6f28798d78386d98c0c9949aaba150d2 139 TIGRFAM TIGR00149 TIGR00149_YjbQ: secondary thiamine-phosphate synthase enzyme 8 139 6.7E-26 T 22-04-2016 IPR001602 Uncharacterised protein family UPF0047 SRM_RS10560 6f28798d78386d98c0c9949aaba150d2 139 SUPERFAMILY SSF111038 1 139 2.88E-37 T 22-04-2016 IPR001602 Uncharacterised protein family UPF0047 SRM_RS10560 6f28798d78386d98c0c9949aaba150d2 139 PANTHER PTHR30615 1 139 3.9E-26 T 22-04-2016 SRM_RS10560 6f28798d78386d98c0c9949aaba150d2 139 ProSitePatterns PS01314 Uncharacterized protein family UPF0047 signature. 100 118 - T 22-04-2016 IPR001602 Uncharacterised protein family UPF0047 SRM_RS10560 6f28798d78386d98c0c9949aaba150d2 139 PIRSF PIRSF004681 1 139 4.6E-31 T 22-04-2016 IPR001602 Uncharacterised protein family UPF0047 SRM_RS10560 6f28798d78386d98c0c9949aaba150d2 139 Pfam PF01894 Uncharacterised protein family UPF0047 20 136 4.5E-29 T 22-04-2016 IPR001602 Uncharacterised protein family UPF0047 SRM_RS10560 6f28798d78386d98c0c9949aaba150d2 139 Gene3D G3DSA:2.60.120.460 1 138 1.0E-35 T 22-04-2016 IPR001602 Uncharacterised protein family UPF0047 SRM_RS15750 715873cb40edd64ff8abc3d8cc80a6c1 506 Pfam PF00801 PKD domain 317 380 4.1E-16 T 22-04-2016 IPR000601 PKD domain SRM_RS15750 715873cb40edd64ff8abc3d8cc80a6c1 506 Pfam PF00801 PKD domain 233 296 1.3E-13 T 22-04-2016 IPR000601 PKD domain SRM_RS15750 715873cb40edd64ff8abc3d8cc80a6c1 506 Pfam PF05036 Sporulation related domain 426 490 2.9E-4 T 22-04-2016 IPR007730 Sporulation-related domain GO:0042834 SRM_RS15750 715873cb40edd64ff8abc3d8cc80a6c1 506 SUPERFAMILY SSF56925 42 214 9.68E-7 T 22-04-2016 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 SRM_RS15750 715873cb40edd64ff8abc3d8cc80a6c1 506 SUPERFAMILY SSF49299 306 390 6.28E-22 T 22-04-2016 IPR000601 PKD domain SRM_RS15750 715873cb40edd64ff8abc3d8cc80a6c1 506 SMART SM00089 225 306 1.9E-13 T 22-04-2016 IPR022409 PKD/Chitinase domain SRM_RS15750 715873cb40edd64ff8abc3d8cc80a6c1 506 SMART SM00089 312 391 5.5E-20 T 22-04-2016 IPR022409 PKD/Chitinase domain SRM_RS15750 715873cb40edd64ff8abc3d8cc80a6c1 506 Pfam PF13505 Outer membrane protein beta-barrel domain 27 194 8.1E-9 T 22-04-2016 IPR027385 Outer membrane protein beta-barrel SRM_RS15750 715873cb40edd64ff8abc3d8cc80a6c1 506 SUPERFAMILY SSF49299 215 308 1.96E-16 T 22-04-2016 IPR000601 PKD domain SRM_RS15750 715873cb40edd64ff8abc3d8cc80a6c1 506 Gene3D G3DSA:2.40.160.20 28 221 2.3E-6 T 22-04-2016 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 SRM_RS15750 715873cb40edd64ff8abc3d8cc80a6c1 506 PANTHER PTHR10877 231 388 5.9E-12 T 22-04-2016 SRM_RS15750 715873cb40edd64ff8abc3d8cc80a6c1 506 Gene3D G3DSA:2.60.40.670 316 388 6.3E-23 T 22-04-2016 IPR000601 PKD domain SRM_RS15750 715873cb40edd64ff8abc3d8cc80a6c1 506 Gene3D G3DSA:2.60.40.670 229 301 5.3E-18 T 22-04-2016 IPR000601 PKD domain SRM_RS07410 06562f9e8dff6d59572e4d909a710003 379 PANTHER PTHR13847:SF180 2 369 2.8E-100 T 22-04-2016 SRM_RS07410 06562f9e8dff6d59572e4d909a710003 379 Gene3D G3DSA:3.50.50.60 145 223 9.9E-56 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SRM_RS07410 06562f9e8dff6d59572e4d909a710003 379 Gene3D G3DSA:3.50.50.60 3 83 9.9E-56 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SRM_RS07410 06562f9e8dff6d59572e4d909a710003 379 Gene3D G3DSA:3.50.50.60 313 371 9.9E-56 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SRM_RS07410 06562f9e8dff6d59572e4d909a710003 379 SUPERFAMILY SSF54373 225 311 1.44E-17 T 22-04-2016 SRM_RS07410 06562f9e8dff6d59572e4d909a710003 379 SUPERFAMILY SSF51905 4 224 4.4E-54 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SRM_RS07410 06562f9e8dff6d59572e4d909a710003 379 SUPERFAMILY SSF51905 313 370 4.4E-54 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SRM_RS07410 06562f9e8dff6d59572e4d909a710003 379 Gene3D G3DSA:3.30.9.10 93 144 5.5E-13 T 22-04-2016 SRM_RS07410 06562f9e8dff6d59572e4d909a710003 379 Gene3D G3DSA:3.30.9.10 224 310 5.5E-13 T 22-04-2016 SRM_RS07410 06562f9e8dff6d59572e4d909a710003 379 Pfam PF01266 FAD dependent oxidoreductase 4 351 2.0E-70 T 22-04-2016 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 SRM_RS07410 06562f9e8dff6d59572e4d909a710003 379 TIGRFAM TIGR02352 thiamin_ThiO: glycine oxidase ThiO 5 355 5.1E-107 T 22-04-2016 IPR012727 Glycine oxidase ThiO GO:0016491|GO:0050660 UniPathway: UPA00060 SRM_RS07410 06562f9e8dff6d59572e4d909a710003 379 PANTHER PTHR13847 2 369 2.8E-100 T 22-04-2016 SRM_RS09835 58bbd30ed4b44ac753b75e39e12f137c 437 SUPERFAMILY SSF109604 4 352 2.97E-83 T 22-04-2016 SRM_RS09835 58bbd30ed4b44ac753b75e39e12f137c 437 PANTHER PTHR11373:SF4 2 351 1.0E-68 T 22-04-2016 SRM_RS09835 58bbd30ed4b44ac753b75e39e12f137c 437 SMART SM00471 53 178 1.7E-8 T 22-04-2016 IPR003607 HD/PDEase domain SRM_RS09835 58bbd30ed4b44ac753b75e39e12f137c 437 Pfam PF01966 HD domain 57 146 1.3E-6 T 22-04-2016 IPR006674 HD domain SRM_RS09835 58bbd30ed4b44ac753b75e39e12f137c 437 Gene3D G3DSA:1.10.3210.10 5 254 3.0E-73 T 22-04-2016 IPR006674 HD domain SRM_RS09835 58bbd30ed4b44ac753b75e39e12f137c 437 PANTHER PTHR11373 2 351 1.0E-68 T 22-04-2016 SRM_RS09000 1254ea3694f301998d78f07d30a58d26 907 SUPERFAMILY SSF52317 669 903 8.01E-15 T 22-04-2016 IPR029062 Class I glutamine amidotransferase-like SRM_RS09000 1254ea3694f301998d78f07d30a58d26 907 SMART SM00631 107 394 0.0041 T 22-04-2016 IPR000834 Peptidase M14, carboxypeptidase A GO:0004181|GO:0006508|GO:0008270 SRM_RS09000 1254ea3694f301998d78f07d30a58d26 907 Pfam PF00246 Zinc carboxypeptidase 115 385 1.4E-19 T 22-04-2016 IPR000834 Peptidase M14, carboxypeptidase A GO:0004181|GO:0006508|GO:0008270 SRM_RS09000 1254ea3694f301998d78f07d30a58d26 907 Gene3D G3DSA:3.40.630.10 105 374 4.9E-34 T 22-04-2016 SRM_RS09000 1254ea3694f301998d78f07d30a58d26 907 SUPERFAMILY SSF53187 178 388 1.92E-54 T 22-04-2016 SRM_RS09000 1254ea3694f301998d78f07d30a58d26 907 SUPERFAMILY SSF53187 101 149 1.92E-54 T 22-04-2016 SRM_RS06785 5f1297f7b1bd6dadd5212f73b9009923 324 PANTHER PTHR32120 3 319 1.9E-104 T 22-04-2016 SRM_RS06785 5f1297f7b1bd6dadd5212f73b9009923 324 PANTHER PTHR32120:SF2 3 319 1.9E-104 T 22-04-2016 SRM_RS06785 5f1297f7b1bd6dadd5212f73b9009923 324 Gene3D G3DSA:1.10.40.50 257 319 3.5E-23 T 22-04-2016 SRM_RS06785 5f1297f7b1bd6dadd5212f73b9009923 324 Pfam PF16745 RsgA N-terminal domain 16 74 1.2E-13 T 22-04-2016 IPR031944 Ribosome biogenesis GTPase RsgA, N-terminal SRM_RS06785 5f1297f7b1bd6dadd5212f73b9009923 324 SUPERFAMILY SSF52540 95 317 2.58E-52 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SRM_RS06785 5f1297f7b1bd6dadd5212f73b9009923 324 Gene3D G3DSA:2.40.50.140 15 79 3.4E-13 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold SRM_RS06785 5f1297f7b1bd6dadd5212f73b9009923 324 Pfam PF03193 Protein of unknown function, DUF258 77 255 2.2E-48 T 22-04-2016 IPR010914 RsgA type GTPase domain GO:0003924|GO:0005525 SRM_RS06785 5f1297f7b1bd6dadd5212f73b9009923 324 Hamap MF_01820 Putative ribosome biogenesis GTPase RsgA [rsgA]. 15 320 34.338 T 22-04-2016 IPR004881 Ribosome biogenesis GTPase RsgA, putative GO:0003924|GO:0005525 SRM_RS06785 5f1297f7b1bd6dadd5212f73b9009923 324 SUPERFAMILY SSF50249 15 80 9.94E-9 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold SRM_RS06785 5f1297f7b1bd6dadd5212f73b9009923 324 Gene3D G3DSA:3.40.50.300 95 254 4.6E-44 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SRM_RS06785 5f1297f7b1bd6dadd5212f73b9009923 324 TIGRFAM TIGR00157 TIGR00157: ribosome small subunit-dependent GTPase A 57 313 5.9E-62 T 22-04-2016 IPR004881 Ribosome biogenesis GTPase RsgA, putative GO:0003924|GO:0005525 SRM_RS11720 591dd496f9f86ba387f1bd6bc29efe99 267 TIGRFAM TIGR04183 Por_Secre_tail: Por secretion system C-terminal sorting domain 191 265 1.1E-10 T 22-04-2016 IPR026444 Secretion system C-terminal sorting domain SRM_RS11835 71c3c4f220de8681251944bde765ec0e 243 Pfam PF07486 Cell Wall Hydrolase 117 218 4.7E-8 T 22-04-2016 IPR011105 Cell wall hydrolase, SleB GO:0016787 SRM_RS08105 f0cde0e785f98f7a5c4e6f974d0ae929 381 Pfam PF14696 Hydroxyphenylpyruvate dioxygenase, HPPD, N-terminal 20 154 2.4E-8 T 22-04-2016 SRM_RS08105 f0cde0e785f98f7a5c4e6f974d0ae929 381 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 184 335 1.1E-15 T 22-04-2016 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain SRM_RS08105 f0cde0e785f98f7a5c4e6f974d0ae929 381 Gene3D G3DSA:3.10.180.10 17 184 1.9E-48 T 22-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase SRM_RS08105 f0cde0e785f98f7a5c4e6f974d0ae929 381 Gene3D G3DSA:3.10.180.10 185 381 8.4E-83 T 22-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase SRM_RS08105 f0cde0e785f98f7a5c4e6f974d0ae929 381 SUPERFAMILY SSF54593 15 368 3.52E-95 T 22-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase SRM_RS08105 f0cde0e785f98f7a5c4e6f974d0ae929 381 PANTHER PTHR11959 1 381 6.5E-177 T 22-04-2016 IPR005956 4-hydroxyphenylpyruvate dioxygenase GO:0003868|GO:0009072|GO:0016701|GO:0055114 SRM_RS08105 f0cde0e785f98f7a5c4e6f974d0ae929 381 TIGRFAM TIGR01263 4HPPD: 4-hydroxyphenylpyruvate dioxygenase 23 381 2.1E-139 T 22-04-2016 IPR005956 4-hydroxyphenylpyruvate dioxygenase GO:0003868|GO:0009072|GO:0016701|GO:0055114 SRM_RS08105 f0cde0e785f98f7a5c4e6f974d0ae929 381 PIRSF PIRSF009283 11 381 1.5E-139 T 22-04-2016 IPR005956 4-hydroxyphenylpyruvate dioxygenase GO:0003868|GO:0009072|GO:0016701|GO:0055114 SRM_RS07810 16203ec0416d1246099597956f7d0a6a 119 Pfam PF11009 Protein of unknown function (DUF2847) 8 106 7.0E-29 T 22-04-2016 IPR022551 Protein of unknown function DUF2847 SRM_RS07810 16203ec0416d1246099597956f7d0a6a 119 Gene3D G3DSA:3.40.30.10 10 114 1.2E-4 T 22-04-2016 IPR012336 Thioredoxin-like fold SRM_RS07810 16203ec0416d1246099597956f7d0a6a 119 TIGRFAM TIGR04019 B_thiol_YtxJ: bacillithiol system protein YtxJ 8 108 1.4E-31 T 22-04-2016 IPR022551 Protein of unknown function DUF2847 SRM_RS07810 16203ec0416d1246099597956f7d0a6a 119 SUPERFAMILY SSF52833 8 95 2.75E-6 T 22-04-2016 IPR012336 Thioredoxin-like fold SRM_RS01215 e9e66d7aec6fbe4ba74416e894b5801c 569 SUPERFAMILY SSF55874 262 409 5.5E-16 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SRM_RS01215 e9e66d7aec6fbe4ba74416e894b5801c 569 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 305 405 6.4E-9 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SRM_RS01215 e9e66d7aec6fbe4ba74416e894b5801c 569 Gene3D G3DSA:3.30.565.10 263 408 5.0E-17 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SRM_RS01215 e9e66d7aec6fbe4ba74416e894b5801c 569 SMART SM00387 301 409 2.0E-9 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SRM_RS07165 4521300abf4c03ebffb2586a8a67717b 379 SUPERFAMILY SSF55174 39 125 3.36E-12 T 22-04-2016 SRM_RS07165 4521300abf4c03ebffb2586a8a67717b 379 Pfam PF01479 S4 domain 40 85 3.2E-9 T 22-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 SRM_RS07165 4521300abf4c03ebffb2586a8a67717b 379 Pfam PF00849 RNA pseudouridylate synthase 112 293 6.5E-34 T 22-04-2016 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 SRM_RS07165 4521300abf4c03ebffb2586a8a67717b 379 TIGRFAM TIGR00005 rluA_subfam: pseudouridine synthase, RluA family 36 368 4.4E-84 T 22-04-2016 IPR006225 Pseudouridine synthase, RluC/RluD GO:0001522|GO:0003723|GO:0009451|GO:0009982 SRM_RS07165 4521300abf4c03ebffb2586a8a67717b 379 SUPERFAMILY SSF55120 98 142 5.55E-71 T 22-04-2016 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 SRM_RS07165 4521300abf4c03ebffb2586a8a67717b 379 SUPERFAMILY SSF55120 173 369 5.55E-71 T 22-04-2016 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 SRM_RS07165 4521300abf4c03ebffb2586a8a67717b 379 Gene3D G3DSA:3.10.290.10 40 88 3.4E-12 T 22-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 SRM_RS07165 4521300abf4c03ebffb2586a8a67717b 379 PANTHER PTHR11079:SF73 180 379 6.8E-113 T 22-04-2016 SRM_RS07165 4521300abf4c03ebffb2586a8a67717b 379 PANTHER PTHR11079:SF73 1 147 6.8E-113 T 22-04-2016 SRM_RS07165 4521300abf4c03ebffb2586a8a67717b 379 ProSitePatterns PS01129 Rlu family of pseudouridine synthase signature. 184 198 - T 22-04-2016 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0009982 SRM_RS07165 4521300abf4c03ebffb2586a8a67717b 379 SMART SM00363 39 100 7.6E-10 T 22-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 SRM_RS07165 4521300abf4c03ebffb2586a8a67717b 379 PANTHER PTHR11079 180 379 6.8E-113 T 22-04-2016 SRM_RS07165 4521300abf4c03ebffb2586a8a67717b 379 PANTHER PTHR11079 1 147 6.8E-113 T 22-04-2016 SRM_RS09185 bb602af1661e3b513644b14607dfb162 575 Gene3D G3DSA:2.40.170.20 118 575 4.9E-7 T 22-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 SRM_RS09185 bb602af1661e3b513644b14607dfb162 575 SUPERFAMILY SSF56935 114 547 2.06E-9 T 22-04-2016 SRM_RS12570 214679ab568059bcfc85435801a03f37 258 Gene3D G3DSA:3.40.50.150 81 244 7.6E-28 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SRM_RS12570 214679ab568059bcfc85435801a03f37 258 SUPERFAMILY SSF53335 59 249 3.25E-39 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SRM_RS12570 214679ab568059bcfc85435801a03f37 258 Pfam PF13649 Methyltransferase domain 105 200 1.9E-15 T 22-04-2016 SRM_RS12570 214679ab568059bcfc85435801a03f37 258 PANTHER PTHR10108 91 251 3.4E-25 T 22-04-2016 SRM_RS14400 626cf4520f5d73258f6f48beb7ded47d 236 Pfam PF01052 Type III flagellar switch regulator (C-ring) FliN C-term 157 225 6.6E-23 T 22-04-2016 IPR001543 Surface presentation of antigen (SpoA) SRM_RS14400 626cf4520f5d73258f6f48beb7ded47d 236 PANTHER PTHR30034:SF1 157 231 9.8E-20 T 22-04-2016 SRM_RS14400 626cf4520f5d73258f6f48beb7ded47d 236 PANTHER PTHR30034 157 231 9.8E-20 T 22-04-2016 SRM_RS14400 626cf4520f5d73258f6f48beb7ded47d 236 PRINTS PR00956 Flagellar motor switch protein FliN signature 202 217 8.4E-22 T 22-04-2016 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb GO:0003774|GO:0006935|GO:0009425|GO:0071973 SRM_RS14400 626cf4520f5d73258f6f48beb7ded47d 236 PRINTS PR00956 Flagellar motor switch protein FliN signature 173 189 8.4E-22 T 22-04-2016 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb GO:0003774|GO:0006935|GO:0009425|GO:0071973 SRM_RS14400 626cf4520f5d73258f6f48beb7ded47d 236 PRINTS PR00956 Flagellar motor switch protein FliN signature 189 202 8.4E-22 T 22-04-2016 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb GO:0003774|GO:0006935|GO:0009425|GO:0071973 SRM_RS14400 626cf4520f5d73258f6f48beb7ded47d 236 PRINTS PR00956 Flagellar motor switch protein FliN signature 156 172 8.4E-22 T 22-04-2016 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb GO:0003774|GO:0006935|GO:0009425|GO:0071973 SRM_RS14400 626cf4520f5d73258f6f48beb7ded47d 236 Gene3D G3DSA:2.30.330.10 150 232 2.0E-28 T 22-04-2016 SRM_RS14400 626cf4520f5d73258f6f48beb7ded47d 236 SUPERFAMILY SSF101801 154 230 5.62E-21 T 22-04-2016 IPR001543 Surface presentation of antigen (SpoA) SRM_RS14400 626cf4520f5d73258f6f48beb7ded47d 236 TIGRFAM TIGR02480 fliN: flagellar motor switch protein FliN 155 227 3.1E-27 T 22-04-2016 IPR012826 Flagellar motor switch FliN GO:0006935|GO:0009288|GO:0016020|GO:0071973 SRM_RS08835 532d48f6d1c7ec76c3d38c6380b0c8a2 408 PANTHER PTHR30489 1 408 8.1E-58 T 22-04-2016 SRM_RS08835 532d48f6d1c7ec76c3d38c6380b0c8a2 408 Pfam PF02687 FtsX-like permease family 276 401 1.2E-14 T 22-04-2016 IPR003838 ABC transporter permease protein domain GO:0016020 SRM_RS08835 532d48f6d1c7ec76c3d38c6380b0c8a2 408 Pfam PF12704 MacB-like periplasmic core domain 26 245 4.1E-17 T 22-04-2016 IPR025857 MacB-like periplasmic core domain SRM_RS02920 e25a1ff78252dcb4af271d36bb0d4679 127 Pfam PF04239 Protein of unknown function (DUF421) 43 108 4.8E-8 T 22-04-2016 IPR007353 Protein of unknown function DUF421 SRM_RS02920 e25a1ff78252dcb4af271d36bb0d4679 127 PANTHER PTHR34582:SF1 11 108 5.9E-24 T 22-04-2016 SRM_RS02920 e25a1ff78252dcb4af271d36bb0d4679 127 PANTHER PTHR34582 11 108 5.9E-24 T 22-04-2016 SRM_RS02920 e25a1ff78252dcb4af271d36bb0d4679 127 Gene3D G3DSA:3.30.240.20 38 104 2.2E-11 T 22-04-2016 IPR023090 Uncharacterised domain UPF0702, alpha/beta domain SRM_RS06875 98d56b7f1d4fda12232169c1c9d77b67 537 PANTHER PTHR33451:SF7 65 534 3.4E-108 T 22-04-2016 SRM_RS06875 98d56b7f1d4fda12232169c1c9d77b67 537 Pfam PF03553 Na+/H+ antiporter family 228 532 3.1E-40 T 22-04-2016 IPR018461 Na+/H+ antiporter, NhaC-like, C-terminal GO:0016021 SRM_RS06875 98d56b7f1d4fda12232169c1c9d77b67 537 PANTHER PTHR33451 65 534 3.4E-108 T 22-04-2016 SRM_RS08080 5c7eb7c6d45d19fd7bf9c4e4b38974aa 140 Pfam PF01250 Ribosomal protein S6 19 108 5.5E-26 T 22-04-2016 IPR000529 Ribosomal protein S6 GO:0003735|GO:0005840|GO:0006412|GO:0019843 SRM_RS08080 5c7eb7c6d45d19fd7bf9c4e4b38974aa 140 PANTHER PTHR21011 19 140 1.2E-20 T 22-04-2016 SRM_RS08080 5c7eb7c6d45d19fd7bf9c4e4b38974aa 140 Gene3D G3DSA:3.30.70.60 19 115 1.8E-30 T 22-04-2016 IPR014717 Translation elongation factor EF1B/ribosomal protein S6 SRM_RS08080 5c7eb7c6d45d19fd7bf9c4e4b38974aa 140 Hamap MF_00360 30S ribosomal protein S6 [rpsF]. 17 111 18.973 T 22-04-2016 IPR020814 Ribosomal protein S6, plastid/chloroplast GO:0003735|GO:0005840|GO:0006412|GO:0019843 SRM_RS08080 5c7eb7c6d45d19fd7bf9c4e4b38974aa 140 SUPERFAMILY SSF54995 19 113 2.49E-27 T 22-04-2016 IPR000529 Ribosomal protein S6 GO:0003735|GO:0005840|GO:0006412|GO:0019843 SRM_RS08080 5c7eb7c6d45d19fd7bf9c4e4b38974aa 140 TIGRFAM TIGR00166 S6: ribosomal protein bS6 19 109 1.0E-19 T 22-04-2016 IPR000529 Ribosomal protein S6 GO:0003735|GO:0005840|GO:0006412|GO:0019843 SRM_RS09625 221db02784c9380f028385b74dc9376c 344 Hamap MF_00211 Anthranilate phosphoribosyltransferase [trpD]. 3 337 36.495 T 22-04-2016 IPR005940 Anthranilate phosphoribosyl transferase GO:0000162|GO:0004048 KEGG: 00400+2.4.2.18|UniPathway: UPA00035 SRM_RS09625 221db02784c9380f028385b74dc9376c 344 PANTHER PTHR11922 20 32 4.8E-102 T 22-04-2016 SRM_RS09625 221db02784c9380f028385b74dc9376c 344 SUPERFAMILY SSF52418 71 334 1.96E-87 T 22-04-2016 IPR000312 Glycosyl transferase, family 3 GO:0008152|GO:0016757 SRM_RS09625 221db02784c9380f028385b74dc9376c 344 Gene3D G3DSA:1.20.970.10 2 64 9.7E-21 T 22-04-2016 SRM_RS09625 221db02784c9380f028385b74dc9376c 344 SUPERFAMILY SSF47648 3 67 5.89E-18 T 22-04-2016 IPR017459 Glycosyl transferase family 3, N-terminal domain SRM_RS09625 221db02784c9380f028385b74dc9376c 344 PANTHER PTHR11922:SF5 20 32 4.8E-102 T 22-04-2016 SRM_RS09625 221db02784c9380f028385b74dc9376c 344 PANTHER PTHR11922 67 342 4.8E-102 T 22-04-2016 SRM_RS09625 221db02784c9380f028385b74dc9376c 344 Pfam PF00591 Glycosyl transferase family, a/b domain 72 328 1.3E-86 T 22-04-2016 IPR000312 Glycosyl transferase, family 3 GO:0008152|GO:0016757 SRM_RS09625 221db02784c9380f028385b74dc9376c 344 PANTHER PTHR11922:SF5 67 342 4.8E-102 T 22-04-2016 SRM_RS09625 221db02784c9380f028385b74dc9376c 344 TIGRFAM TIGR01245 trpD: anthranilate phosphoribosyltransferase 5 335 1.6E-114 T 22-04-2016 IPR005940 Anthranilate phosphoribosyl transferase GO:0000162|GO:0004048 KEGG: 00400+2.4.2.18|UniPathway: UPA00035 SRM_RS09625 221db02784c9380f028385b74dc9376c 344 Gene3D G3DSA:3.40.1030.10 71 339 5.1E-101 T 22-04-2016 IPR000312 Glycosyl transferase, family 3 GO:0008152|GO:0016757 SRM_RS09625 221db02784c9380f028385b74dc9376c 344 Pfam PF02885 Glycosyl transferase family, helical bundle domain 4 64 4.6E-17 T 22-04-2016 IPR017459 Glycosyl transferase family 3, N-terminal domain SRM_RS11965 c27fa9c468cce004a0ee28f946d01a37 185 SUPERFAMILY SSF51316 52 177 4.81E-52 T 22-04-2016 IPR011057 Mss4-like SRM_RS11965 c27fa9c468cce004a0ee28f946d01a37 185 Pfam PF01641 SelR domain 57 175 3.9E-44 T 22-04-2016 IPR002579 Peptide methionine sulphoxide reductase MrsB GO:0033743|GO:0055114 SRM_RS11965 c27fa9c468cce004a0ee28f946d01a37 185 PANTHER PTHR10173:SF18 50 179 5.8E-42 T 22-04-2016 SRM_RS11965 c27fa9c468cce004a0ee28f946d01a37 185 Gene3D G3DSA:2.170.150.20 51 178 3.4E-51 T 22-04-2016 IPR002579 Peptide methionine sulphoxide reductase MrsB GO:0033743|GO:0055114 SRM_RS11965 c27fa9c468cce004a0ee28f946d01a37 185 PANTHER PTHR10173 50 179 5.8E-42 T 22-04-2016 IPR028427 Peptide methionine sulfoxide reductase GO:0006979|GO:0016671|GO:0030091 SRM_RS11965 c27fa9c468cce004a0ee28f946d01a37 185 TIGRFAM TIGR00357 TIGR00357: methionine-R-sulfoxide reductase 53 177 5.8E-44 T 22-04-2016 IPR002579 Peptide methionine sulphoxide reductase MrsB GO:0033743|GO:0055114 SRM_RS04585 fdf11dd7bcbd6f0b6871e1ab3ad2f005 430 Gene3D G3DSA:3.65.10.10 21 229 1.7E-50 T 22-04-2016 IPR001986 Enolpyruvate transferase domain GO:0016765 SRM_RS04585 fdf11dd7bcbd6f0b6871e1ab3ad2f005 430 Pfam PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) 6 424 8.4E-117 T 22-04-2016 IPR001986 Enolpyruvate transferase domain GO:0016765 SRM_RS04585 fdf11dd7bcbd6f0b6871e1ab3ad2f005 430 Hamap MF_00210 3-phosphoshikimate 1-carboxyvinyltransferase [aroA]. 9 430 33.209 T 22-04-2016 IPR006264 3-phosphoshikimate 1-carboxyvinyltransferase GO:0003866 KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163|UniPathway: UPA00053 SRM_RS04585 fdf11dd7bcbd6f0b6871e1ab3ad2f005 430 SUPERFAMILY SSF55205 8 427 1.64E-122 T 22-04-2016 IPR013792 RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta GO:0003824 SRM_RS04585 fdf11dd7bcbd6f0b6871e1ab3ad2f005 430 ProSitePatterns PS00104 EPSP synthase signature 1. 88 102 - T 22-04-2016 IPR023193 3-phosphoshikimate 1-carboxyvinyltransferase, conserved site KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163|UniPathway: UPA00053 SRM_RS04585 fdf11dd7bcbd6f0b6871e1ab3ad2f005 430 PIRSF PIRSF000505 1 430 5.0E-119 T 22-04-2016 IPR006264 3-phosphoshikimate 1-carboxyvinyltransferase GO:0003866 KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163|UniPathway: UPA00053 SRM_RS04585 fdf11dd7bcbd6f0b6871e1ab3ad2f005 430 PANTHER PTHR21090 4 429 1.1E-166 T 22-04-2016 SRM_RS04585 fdf11dd7bcbd6f0b6871e1ab3ad2f005 430 TIGRFAM TIGR01356 aroA: 3-phosphoshikimate 1-carboxyvinyltransferase 13 427 1.6E-120 T 22-04-2016 IPR006264 3-phosphoshikimate 1-carboxyvinyltransferase GO:0003866 KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163|UniPathway: UPA00053 SRM_RS04585 fdf11dd7bcbd6f0b6871e1ab3ad2f005 430 PANTHER PTHR21090:SF5 4 429 1.1E-166 T 22-04-2016 SRM_RS04585 fdf11dd7bcbd6f0b6871e1ab3ad2f005 430 Gene3D G3DSA:3.65.10.10 230 426 3.0E-53 T 22-04-2016 IPR001986 Enolpyruvate transferase domain GO:0016765 SRM_RS04585 fdf11dd7bcbd6f0b6871e1ab3ad2f005 430 ProSitePatterns PS00885 EPSP synthase signature 2. 340 358 - T 22-04-2016 IPR023193 3-phosphoshikimate 1-carboxyvinyltransferase, conserved site KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163|UniPathway: UPA00053 SRM_RS13935 982b6715e37c99839cfce02cf6956d88 250 PANTHER PTHR30188:SF4 1 250 1.7E-72 T 22-04-2016 SRM_RS13935 982b6715e37c99839cfce02cf6956d88 250 Pfam PF02405 Permease MlaE 38 247 1.4E-68 T 22-04-2016 IPR030802 ABC transporter permease MalE GO:0006810|GO:0043190 SRM_RS13935 982b6715e37c99839cfce02cf6956d88 250 PANTHER PTHR30188 1 250 1.7E-72 T 22-04-2016 IPR030802 ABC transporter permease MalE GO:0006810|GO:0043190 SRM_RS08380 3d3c2f0dadda61193a97d2099f7974e6 366 PANTHER PTHR10859:SF75 32 242 7.1E-27 T 22-04-2016 SRM_RS08380 3d3c2f0dadda61193a97d2099f7974e6 366 Gene3D G3DSA:3.90.550.10 44 246 9.6E-25 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases SRM_RS08380 3d3c2f0dadda61193a97d2099f7974e6 366 SUPERFAMILY SSF53448 33 306 2.01E-34 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases SRM_RS08380 3d3c2f0dadda61193a97d2099f7974e6 366 PANTHER PTHR10859 32 242 7.1E-27 T 22-04-2016 SRM_RS08380 3d3c2f0dadda61193a97d2099f7974e6 366 Pfam PF00535 Glycosyl transferase family 2 47 154 4.1E-19 T 22-04-2016 IPR001173 Glycosyltransferase 2-like SRM_RS07150 22569df7b25a5320869ce430dcedc3c8 331 Gene3D G3DSA:3.40.50.450 71 221 3.3E-15 T 22-04-2016 SRM_RS07150 22569df7b25a5320869ce430dcedc3c8 331 PANTHER PTHR32039 24 330 1.2E-106 T 22-04-2016 SRM_RS07150 22569df7b25a5320869ce430dcedc3c8 331 TIGRFAM TIGR00732 dprA: DNA protecting protein DprA 35 247 2.3E-72 T 22-04-2016 IPR003488 DNA recombination-mediator protein A GO:0009294 SRM_RS07150 22569df7b25a5320869ce430dcedc3c8 331 SUPERFAMILY SSF102405 41 247 1.45E-45 T 22-04-2016 SRM_RS07150 22569df7b25a5320869ce430dcedc3c8 331 PANTHER PTHR32039:SF8 24 330 1.2E-106 T 22-04-2016 SRM_RS07150 22569df7b25a5320869ce430dcedc3c8 331 Pfam PF02481 DNA recombination-mediator protein A 35 238 8.0E-77 T 22-04-2016 IPR003488 DNA recombination-mediator protein A GO:0009294 SRM_RS07900 3bfae0e3640236e761677045ee09a3b8 405 PANTHER PTHR32468:SF4 15 399 9.0E-50 T 22-04-2016 SRM_RS07900 3bfae0e3640236e761677045ee09a3b8 405 PANTHER PTHR32468 15 399 9.0E-50 T 22-04-2016 SRM_RS07900 3bfae0e3640236e761677045ee09a3b8 405 Pfam PF00999 Sodium/hydrogen exchanger family 19 395 1.5E-43 T 22-04-2016 IPR006153 Cation/H+ exchanger GO:0006812|GO:0015299|GO:0016021|GO:0055085 SRM_RS05375 239678f589279a8887a9b0dfb99cdfa2 226 Hamap MF_00688 Leucyl/phenylalanyl-tRNA--protein transferase [aat]. 1 226 78.112 T 22-04-2016 IPR004616 Leucyl/phenylalanyl-tRNA-protein transferase GO:0008914|GO:0030163 SRM_RS05375 239678f589279a8887a9b0dfb99cdfa2 226 SUPERFAMILY SSF55729 3 194 5.93E-73 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase SRM_RS05375 239678f589279a8887a9b0dfb99cdfa2 226 Pfam PF03588 Leucyl/phenylalanyl-tRNA protein transferase 8 173 4.9E-66 T 22-04-2016 IPR004616 Leucyl/phenylalanyl-tRNA-protein transferase GO:0008914|GO:0030163 SRM_RS05375 239678f589279a8887a9b0dfb99cdfa2 226 TIGRFAM TIGR00667 aat: leucyl/phenylalanyl-tRNA--protein transferase 11 187 4.1E-57 T 22-04-2016 IPR004616 Leucyl/phenylalanyl-tRNA-protein transferase GO:0008914|GO:0030163 SRM_RS05375 239678f589279a8887a9b0dfb99cdfa2 226 PANTHER PTHR30098 4 219 6.5E-73 T 22-04-2016 SRM_RS11340 dcfaeeb461b9a246983f25247ba62b3c 741 Gene3D G3DSA:2.40.10.10 657 709 2.5E-6 T 22-04-2016 SRM_RS11340 dcfaeeb461b9a246983f25247ba62b3c 741 PANTHER PTHR38469:SF1 51 740 4.0E-94 T 22-04-2016 SRM_RS11340 dcfaeeb461b9a246983f25247ba62b3c 741 PANTHER PTHR38469 51 740 4.0E-94 T 22-04-2016 SRM_RS11340 dcfaeeb461b9a246983f25247ba62b3c 741 SUPERFAMILY SSF50494 267 339 4.76E-17 T 22-04-2016 IPR009003 Peptidase S1, PA clan SRM_RS11340 dcfaeeb461b9a246983f25247ba62b3c 741 SUPERFAMILY SSF50494 660 695 4.76E-17 T 22-04-2016 IPR009003 Peptidase S1, PA clan SRM_RS11340 dcfaeeb461b9a246983f25247ba62b3c 741 SUPERFAMILY SSF50494 105 131 4.76E-17 T 22-04-2016 IPR009003 Peptidase S1, PA clan SRM_RS11340 dcfaeeb461b9a246983f25247ba62b3c 741 SUPERFAMILY SSF50494 227 239 4.76E-17 T 22-04-2016 IPR009003 Peptidase S1, PA clan SRM_RS11340 dcfaeeb461b9a246983f25247ba62b3c 741 Pfam PF10459 Peptidase S46 70 733 1.2E-187 T 22-04-2016 IPR019500 Peptidase S46 GO:0008239|GO:0070009 SRM_RS12115 5f7c3ca32081fb412284776b89940ece 879 Pfam PF13715 CarboxypepD_reg-like domain 115 199 2.4E-17 T 22-04-2016 SRM_RS12115 5f7c3ca32081fb412284776b89940ece 879 Gene3D G3DSA:2.40.170.20 334 849 1.1E-34 T 22-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 SRM_RS12115 5f7c3ca32081fb412284776b89940ece 879 Gene3D G3DSA:2.60.40.1120 115 183 6.7E-15 T 22-04-2016 IPR014766 Carboxypeptidase, regulatory domain SRM_RS12115 5f7c3ca32081fb412284776b89940ece 879 SUPERFAMILY SSF49464 114 181 3.53E-15 T 22-04-2016 IPR008969 Carboxypeptidase-like, regulatory domain SRM_RS12115 5f7c3ca32081fb412284776b89940ece 879 PANTHER PTHR30069 79 306 1.0E-14 T 22-04-2016 SRM_RS12115 5f7c3ca32081fb412284776b89940ece 879 Gene3D G3DSA:2.170.130.10 216 306 3.9E-5 T 22-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 SRM_RS12115 5f7c3ca32081fb412284776b89940ece 879 Pfam PF07715 TonB-dependent Receptor Plug Domain 224 307 9.6E-9 T 22-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 SRM_RS12115 5f7c3ca32081fb412284776b89940ece 879 Pfam PF00593 TonB dependent receptor 628 852 3.5E-11 T 22-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 SRM_RS12115 5f7c3ca32081fb412284776b89940ece 879 SUPERFAMILY SSF56935 223 859 1.95E-57 T 22-04-2016 SRM_RS12230 241f055de43198ed09a29768dbc141fd 1035 Gene3D G3DSA:2.40.170.20 954 1035 6.5E-41 T 22-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 SRM_RS12230 241f055de43198ed09a29768dbc141fd 1035 Gene3D G3DSA:2.40.170.20 258 265 6.5E-41 T 22-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 SRM_RS12230 241f055de43198ed09a29768dbc141fd 1035 Gene3D G3DSA:2.40.170.20 561 672 6.5E-41 T 22-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 SRM_RS12230 241f055de43198ed09a29768dbc141fd 1035 Gene3D G3DSA:2.40.170.20 710 909 6.5E-41 T 22-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 SRM_RS12230 241f055de43198ed09a29768dbc141fd 1035 Gene3D G3DSA:2.40.170.20 299 509 6.5E-41 T 22-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 SRM_RS12230 241f055de43198ed09a29768dbc141fd 1035 Gene3D G3DSA:2.170.130.10 130 257 7.6E-11 T 22-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 SRM_RS12230 241f055de43198ed09a29768dbc141fd 1035 Pfam PF07715 TonB-dependent Receptor Plug Domain 156 252 3.2E-11 T 22-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 SRM_RS12230 241f055de43198ed09a29768dbc141fd 1035 SUPERFAMILY SSF56935 132 498 1.65E-72 T 22-04-2016 SRM_RS12230 241f055de43198ed09a29768dbc141fd 1035 SUPERFAMILY SSF56935 544 654 1.65E-72 T 22-04-2016 SRM_RS12230 241f055de43198ed09a29768dbc141fd 1035 SUPERFAMILY SSF56935 796 911 1.65E-72 T 22-04-2016 SRM_RS12230 241f055de43198ed09a29768dbc141fd 1035 SUPERFAMILY SSF56935 946 1035 1.65E-72 T 22-04-2016 SRM_RS12230 241f055de43198ed09a29768dbc141fd 1035 SUPERFAMILY SSF56935 705 755 1.65E-72 T 22-04-2016 SRM_RS05960 79016da9a5ae84a3577661bba6974d86 210 PRINTS PR01071 Acetyl-CoA biotin carboxyl carrier protein signature 137 150 1.67E-18 T 22-04-2016 IPR001249 Acetyl-CoA biotin carboxyl carrier GO:0003989|GO:0006633|GO:0009317 UniPathway: UPA00094 SRM_RS05960 79016da9a5ae84a3577661bba6974d86 210 PRINTS PR01071 Acetyl-CoA biotin carboxyl carrier protein signature 169 182 1.67E-18 T 22-04-2016 IPR001249 Acetyl-CoA biotin carboxyl carrier GO:0003989|GO:0006633|GO:0009317 UniPathway: UPA00094 SRM_RS05960 79016da9a5ae84a3577661bba6974d86 210 PRINTS PR01071 Acetyl-CoA biotin carboxyl carrier protein signature 154 168 1.67E-18 T 22-04-2016 IPR001249 Acetyl-CoA biotin carboxyl carrier GO:0003989|GO:0006633|GO:0009317 UniPathway: UPA00094 SRM_RS05960 79016da9a5ae84a3577661bba6974d86 210 PANTHER PTHR23151 131 210 8.9E-42 T 22-04-2016 SRM_RS05960 79016da9a5ae84a3577661bba6974d86 210 PANTHER PTHR23151 1 91 8.9E-42 T 22-04-2016 SRM_RS05960 79016da9a5ae84a3577661bba6974d86 210 TIGRFAM TIGR00531 BCCP: acetyl-CoA carboxylase, biotin carboxyl carrier protein 107 208 4.5E-40 T 22-04-2016 IPR001249 Acetyl-CoA biotin carboxyl carrier GO:0003989|GO:0006633|GO:0009317 UniPathway: UPA00094 SRM_RS05960 79016da9a5ae84a3577661bba6974d86 210 Gene3D G3DSA:2.40.50.100 131 207 1.3E-30 T 22-04-2016 SRM_RS05960 79016da9a5ae84a3577661bba6974d86 210 Pfam PF00364 Biotin-requiring enzyme 134 207 1.4E-21 T 22-04-2016 IPR000089 Biotin/lipoyl attachment SRM_RS05960 79016da9a5ae84a3577661bba6974d86 210 SUPERFAMILY SSF51230 133 207 1.02E-23 T 22-04-2016 IPR011053 Single hybrid motif SRM_RS15895 d742edb00219bc032cfc004db4b05f99 532 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 298 495 3.6E-54 T 22-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 SRM_RS15895 d742edb00219bc032cfc004db4b05f99 532 SMART SM00065 16 163 5.6E-11 T 22-04-2016 IPR003018 GAF domain GO:0005515 SRM_RS15895 d742edb00219bc032cfc004db4b05f99 532 SUPERFAMILY SSF55781 2 174 8.94E-21 T 22-04-2016 IPR029016 GAF domain-like SRM_RS15895 d742edb00219bc032cfc004db4b05f99 532 Gene3D G3DSA:3.30.450.40 2 154 5.6E-23 T 22-04-2016 IPR029016 GAF domain-like SRM_RS15895 d742edb00219bc032cfc004db4b05f99 532 PANTHER PTHR32089 174 499 1.2E-106 T 22-04-2016 SRM_RS15895 d742edb00219bc032cfc004db4b05f99 532 Gene3D G3DSA:1.10.287.950 249 466 2.2E-58 T 22-04-2016 SRM_RS15895 d742edb00219bc032cfc004db4b05f99 532 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 333 360 8.1E-20 T 22-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 SRM_RS15895 d742edb00219bc032cfc004db4b05f99 532 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 256 285 8.1E-20 T 22-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 SRM_RS15895 d742edb00219bc032cfc004db4b05f99 532 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 362 391 8.1E-20 T 22-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 SRM_RS15895 d742edb00219bc032cfc004db4b05f99 532 SUPERFAMILY SSF58104 187 498 1.83E-75 T 22-04-2016 SRM_RS15895 d742edb00219bc032cfc004db4b05f99 532 Pfam PF13185 GAF domain 15 153 1.5E-13 T 22-04-2016 IPR003018 GAF domain GO:0005515 SRM_RS15895 d742edb00219bc032cfc004db4b05f99 532 SMART SM00283 235 496 1.5E-82 T 22-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 SRM_RS12770 195769ba36feaf62ad437bc52b2054c8 491 Pfam PF02386 Cation transport protein 70 471 4.7E-56 T 22-04-2016 IPR003445 Cation transporter GO:0006812|GO:0008324|GO:0055085 SRM_RS12770 195769ba36feaf62ad437bc52b2054c8 491 PANTHER PTHR32024:SF1 40 491 1.6E-145 T 22-04-2016 SRM_RS12770 195769ba36feaf62ad437bc52b2054c8 491 TIGRFAM TIGR00933 2a38: potassium uptake protein, TrkH family 66 460 1.2E-102 T 22-04-2016 IPR004772 TrkH potassium transport family GO:0016021|GO:0022820|GO:0071805 SRM_RS12770 195769ba36feaf62ad437bc52b2054c8 491 PANTHER PTHR32024 40 491 1.6E-145 T 22-04-2016 SRM_RS08250 512f8c5883de5c38099521c2fac50164 718 Gene3D G3DSA:3.40.50.880 285 530 7.6E-14 T 22-04-2016 IPR029062 Class I glutamine amidotransferase-like SRM_RS08250 512f8c5883de5c38099521c2fac50164 718 SUPERFAMILY SSF53300 74 217 8.7E-9 T 22-04-2016 IPR002035 von Willebrand factor, type A SRM_RS08250 512f8c5883de5c38099521c2fac50164 718 Gene3D G3DSA:2.60.40.920 534 615 2.9E-5 T 22-04-2016 IPR003344 Big-1 (bacterial Ig-like domain 1) domain SRM_RS08250 512f8c5883de5c38099521c2fac50164 718 PANTHER PTHR37947 1 718 4.9E-30 T 22-04-2016 SRM_RS08250 512f8c5883de5c38099521c2fac50164 718 SUPERFAMILY SSF52317 290 530 4.35E-13 T 22-04-2016 IPR029062 Class I glutamine amidotransferase-like SRM_RS01945 4190158fcdd5156f67cb6208c176a1a5 189 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 130 159 7.6E-4 T 22-04-2016 IPR001451 Hexapeptide repeat SRM_RS01945 4190158fcdd5156f67cb6208c176a1a5 189 PANTHER PTHR23416:SF36 28 181 9.3E-43 T 22-04-2016 SRM_RS01945 4190158fcdd5156f67cb6208c176a1a5 189 SUPERFAMILY SSF51161 17 182 3.47E-37 T 22-04-2016 IPR011004 Trimeric LpxA-like SRM_RS01945 4190158fcdd5156f67cb6208c176a1a5 189 PANTHER PTHR23416 28 181 9.3E-43 T 22-04-2016 SRM_RS01945 4190158fcdd5156f67cb6208c176a1a5 189 Gene3D G3DSA:2.160.10.10 32 182 8.5E-39 T 22-04-2016 SRM_RS03575 a26dc605352ba012634d8d97252e45fd 278 SUPERFAMILY SSF51735 8 258 2.03E-48 T 22-04-2016 IPR016040 NAD(P)-binding domain SRM_RS03575 a26dc605352ba012634d8d97252e45fd 278 PANTHER PTHR24322 163 195 3.5E-30 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SRM_RS03575 a26dc605352ba012634d8d97252e45fd 278 PANTHER PTHR24322 16 147 3.5E-30 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SRM_RS03575 a26dc605352ba012634d8d97252e45fd 278 PIRSF PIRSF000094 4 263 6.9E-57 T 22-04-2016 IPR014358 Enoyl-[acyl-carrier-protein] reductase (NADH) GO:0004318|GO:0006633|GO:0055114 KEGG: 00061+1.3.1.9|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWYG-321|UniPathway: UPA00094 SRM_RS03575 a26dc605352ba012634d8d97252e45fd 278 Gene3D G3DSA:3.40.50.720 7 256 7.7E-50 T 22-04-2016 IPR016040 NAD(P)-binding domain SRM_RS03575 a26dc605352ba012634d8d97252e45fd 278 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 16 255 4.4E-63 T 22-04-2016 SRM_RS03575 a26dc605352ba012634d8d97252e45fd 278 PANTHER PTHR24322:SF317 163 195 3.5E-30 T 22-04-2016 IPR014358 Enoyl-[acyl-carrier-protein] reductase (NADH) GO:0004318|GO:0006633|GO:0055114 KEGG: 00061+1.3.1.9|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWYG-321|UniPathway: UPA00094 SRM_RS03575 a26dc605352ba012634d8d97252e45fd 278 PANTHER PTHR24322:SF317 16 147 3.5E-30 T 22-04-2016 IPR014358 Enoyl-[acyl-carrier-protein] reductase (NADH) GO:0004318|GO:0006633|GO:0055114 KEGG: 00061+1.3.1.9|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWYG-321|UniPathway: UPA00094 SRM_RS00790 3ce16576d1860629c3ccc397dc3f2218 415 Pfam PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase 20 211 2.7E-80 T 22-04-2016 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB GO:0008686|GO:0009231 KEGG: 00740+4.1.99.12|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 SRM_RS00790 3ce16576d1860629c3ccc397dc3f2218 415 TIGRFAM TIGR00506 ribB: 3,4-dihydroxy-2-butanone-4-phosphate synthase 16 212 1.6E-70 T 22-04-2016 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB GO:0008686|GO:0009231 KEGG: 00740+4.1.99.12|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 SRM_RS00790 3ce16576d1860629c3ccc397dc3f2218 415 SUPERFAMILY SSF142695 217 386 2.09E-51 T 22-04-2016 IPR032677 GTP cyclohydrolase II KEGG: 00740+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|UniPathway: UPA00275 SRM_RS00790 3ce16576d1860629c3ccc397dc3f2218 415 Hamap MF_00180 3,4-dihydroxy-2-butanone 4-phosphate synthase [ribB]. 14 216 38.841 T 22-04-2016 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB GO:0008686|GO:0009231 KEGG: 00740+4.1.99.12|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 SRM_RS00790 3ce16576d1860629c3ccc397dc3f2218 415 PANTHER PTHR21327 1 394 7.6E-168 T 22-04-2016 SRM_RS00790 3ce16576d1860629c3ccc397dc3f2218 415 SUPERFAMILY SSF55821 14 216 8.93E-82 T 22-04-2016 IPR017945 DHBP synthase RibB-like alpha/beta domain SRM_RS00790 3ce16576d1860629c3ccc397dc3f2218 415 PANTHER PTHR21327:SF6 1 394 7.6E-168 T 22-04-2016 SRM_RS00790 3ce16576d1860629c3ccc397dc3f2218 415 Pfam PF00925 GTP cyclohydrolase II 220 384 1.3E-49 T 22-04-2016 IPR032677 GTP cyclohydrolase II KEGG: 00740+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|UniPathway: UPA00275 SRM_RS00790 3ce16576d1860629c3ccc397dc3f2218 415 PIRSF PIRSF001259 14 404 4.0E-135 T 22-04-2016 SRM_RS00790 3ce16576d1860629c3ccc397dc3f2218 415 Gene3D G3DSA:3.90.870.10 12 224 4.8E-93 T 22-04-2016 IPR017945 DHBP synthase RibB-like alpha/beta domain SRM_RS15150 42597eb85f0656742bd2d65f75a8100e 218 SUPERFAMILY SSF53474 17 211 2.3E-41 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold SRM_RS15150 42597eb85f0656742bd2d65f75a8100e 218 Pfam PF02230 Phospholipase/Carboxylesterase 19 211 1.4E-26 T 22-04-2016 IPR003140 Phospholipase/carboxylesterase/thioesterase GO:0016787 SRM_RS15150 42597eb85f0656742bd2d65f75a8100e 218 Gene3D G3DSA:3.40.50.1820 20 213 1.9E-40 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold SRM_RS15150 42597eb85f0656742bd2d65f75a8100e 218 PANTHER PTHR10655 18 207 5.8E-33 T 22-04-2016 SRM_RS12890 a37228450fa8dd147bf5556bcab8d308 355 PANTHER PTHR30570:SF1 40 341 1.8E-87 T 22-04-2016 SRM_RS12890 a37228450fa8dd147bf5556bcab8d308 355 Pfam PF12849 PBP superfamily domain 35 288 5.6E-32 T 22-04-2016 IPR024370 PBP domain SRM_RS12890 a37228450fa8dd147bf5556bcab8d308 355 PANTHER PTHR30570 40 341 1.8E-87 T 22-04-2016 SRM_RS12890 a37228450fa8dd147bf5556bcab8d308 355 SUPERFAMILY SSF53850 39 315 4.65E-71 T 22-04-2016 SRM_RS12890 a37228450fa8dd147bf5556bcab8d308 355 TIGRFAM TIGR02136 ptsS_2: phosphate binding protein 35 302 4.3E-85 T 22-04-2016 IPR011862 Phosphate binding protein GO:0006810 SRM_RS12890 a37228450fa8dd147bf5556bcab8d308 355 Gene3D G3DSA:3.40.190.10 39 181 1.6E-35 T 22-04-2016 SRM_RS15215 267ef1459f432131bedc46340e02ba1a 78 Pfam PF00550 Phosphopantetheine attachment site 8 74 2.0E-16 T 22-04-2016 IPR009081 Phosphopantetheine binding ACP domain SRM_RS15215 267ef1459f432131bedc46340e02ba1a 78 Hamap MF_01217 Acyl carrier protein [acpP]. 4 78 21.715 T 22-04-2016 IPR003231 Acyl carrier protein (ACP) GO:0006633 UniPathway: UPA00094 SRM_RS15215 267ef1459f432131bedc46340e02ba1a 78 SMART SM00823 Phosphopantetheine attachment site 6 78 0.0022 T 22-04-2016 IPR020806 Polyketide synthase, phosphopantetheine-binding domain GO:0031177 SRM_RS15215 267ef1459f432131bedc46340e02ba1a 78 SUPERFAMILY SSF47336 3 77 4.06E-24 T 22-04-2016 IPR009081 Phosphopantetheine binding ACP domain SRM_RS15215 267ef1459f432131bedc46340e02ba1a 78 Gene3D G3DSA:1.10.1200.10 4 77 5.0E-31 T 22-04-2016 IPR009081 Phosphopantetheine binding ACP domain SRM_RS15215 267ef1459f432131bedc46340e02ba1a 78 TIGRFAM TIGR00517 acyl_carrier: acyl carrier protein 3 77 1.2E-32 T 22-04-2016 IPR003231 Acyl carrier protein (ACP) GO:0006633 UniPathway: UPA00094 SRM_RS15215 267ef1459f432131bedc46340e02ba1a 78 ProDom PD000887 CARRIER ACYL PHOSPHOPANTETHEINE ACP ACID FATTY BIOSYNTHESIS LIPID SYNTHESIS CHLOROPLAST 36 76 2.0E-8 T 22-04-2016 IPR003231 Acyl carrier protein (ACP) GO:0006633 UniPathway: UPA00094 SRM_RS15215 267ef1459f432131bedc46340e02ba1a 78 ProSitePatterns PS00012 Phosphopantetheine attachment site. 33 48 - T 22-04-2016 IPR006162 Phosphopantetheine attachment site SRM_RS10915 9de5be780bf95667f087498bea5e7a6c 603 PANTHER PTHR23077 52 69 2.3E-15 T 22-04-2016 SRM_RS10915 9de5be780bf95667f087498bea5e7a6c 603 PANTHER PTHR23077 313 533 2.3E-15 T 22-04-2016 SRM_RS10915 9de5be780bf95667f087498bea5e7a6c 603 SMART SM00382 346 481 3.4E-6 T 22-04-2016 IPR003593 AAA+ ATPase domain SRM_RS10915 9de5be780bf95667f087498bea5e7a6c 603 Gene3D G3DSA:3.40.50.300 316 489 1.2E-27 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SRM_RS10915 9de5be780bf95667f087498bea5e7a6c 603 SUPERFAMILY SSF52540 317 555 3.92E-34 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SRM_RS10915 9de5be780bf95667f087498bea5e7a6c 603 Gene3D G3DSA:1.10.8.60 490 552 1.9E-5 T 22-04-2016 SRM_RS10915 9de5be780bf95667f087498bea5e7a6c 603 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 351 475 6.8E-21 T 22-04-2016 IPR003959 ATPase, AAA-type, core GO:0005524 SRM_RS13340 206761ffac8512ef6957b907d3d4e40b 420 PANTHER PTHR30474 249 418 5.1E-112 T 22-04-2016 IPR001182 Cell cycle protein FtsW/RodA GO:0016021|GO:0051301 SRM_RS13340 206761ffac8512ef6957b907d3d4e40b 420 PANTHER PTHR30474 5 205 5.1E-112 T 22-04-2016 IPR001182 Cell cycle protein FtsW/RodA GO:0016021|GO:0051301 SRM_RS13340 206761ffac8512ef6957b907d3d4e40b 420 TIGRFAM TIGR02210 rodA_shape: rod shape-determining protein RodA 9 412 7.8E-110 T 22-04-2016 IPR011923 Rod shape-determining protein RodA GO:0008360|GO:0016021 SRM_RS13340 206761ffac8512ef6957b907d3d4e40b 420 Pfam PF01098 Cell cycle protein 14 200 1.9E-27 T 22-04-2016 IPR001182 Cell cycle protein FtsW/RodA GO:0016021|GO:0051301 SRM_RS13340 206761ffac8512ef6957b907d3d4e40b 420 Pfam PF01098 Cell cycle protein 221 412 9.8E-56 T 22-04-2016 IPR001182 Cell cycle protein FtsW/RodA GO:0016021|GO:0051301 SRM_RS13340 206761ffac8512ef6957b907d3d4e40b 420 ProSitePatterns PS00428 Cell cycle proteins ftsW / rodA / spoVE signature. 370 394 - T 22-04-2016 IPR018365 Cell cycle, FtsW / RodA / SpoVE, conserved site GO:0007049|GO:0016021 SRM_RS03390 2fbfb9e5165ffc8f00060ce75efac928 188 Pfam PF02622 Uncharacterized ACR, COG1678 19 172 1.5E-46 T 22-04-2016 IPR003774 Protein of unknown function UPF0301 SRM_RS03390 2fbfb9e5165ffc8f00060ce75efac928 188 PANTHER PTHR30327:SF1 1 188 1.5E-50 T 22-04-2016 SRM_RS03390 2fbfb9e5165ffc8f00060ce75efac928 188 SUPERFAMILY SSF143456 10 182 1.2E-54 T 22-04-2016 SRM_RS03390 2fbfb9e5165ffc8f00060ce75efac928 188 Gene3D G3DSA:3.40.1740.10 129 175 1.1E-29 T 22-04-2016 SRM_RS03390 2fbfb9e5165ffc8f00060ce75efac928 188 Gene3D G3DSA:3.40.1740.10 7 48 1.1E-29 T 22-04-2016 SRM_RS03390 2fbfb9e5165ffc8f00060ce75efac928 188 Gene3D G3DSA:3.30.70.1300 49 128 9.5E-8 T 22-04-2016 SRM_RS03390 2fbfb9e5165ffc8f00060ce75efac928 188 Hamap MF_00758 UPF0301 protein YqgE [yqgE]. 8 185 26.253 T 22-04-2016 IPR003774 Protein of unknown function UPF0301 SRM_RS03390 2fbfb9e5165ffc8f00060ce75efac928 188 PANTHER PTHR30327 1 188 1.5E-50 T 22-04-2016 SRM_RS10640 7b2c0d7208829d143e4af47c694af47f 222 SUPERFAMILY SSF53448 7 201 2.01E-37 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases SRM_RS10640 7b2c0d7208829d143e4af47c694af47f 222 Pfam PF09837 Uncharacterized protein conserved in bacteria (DUF2064) 47 158 6.3E-28 T 22-04-2016 IPR018641 Transferase 1, rSAM/selenodomain-associated SRM_RS10640 7b2c0d7208829d143e4af47c694af47f 222 TIGRFAM TIGR04282 glyco_like_cofC: transferase 1, rSAM/selenodomain-associated 5 192 4.6E-56 T 22-04-2016 IPR018641 Transferase 1, rSAM/selenodomain-associated SRM_RS10640 7b2c0d7208829d143e4af47c694af47f 222 Gene3D G3DSA:3.90.550.10 5 184 2.3E-25 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases SRM_RS10640 7b2c0d7208829d143e4af47c694af47f 222 PANTHER PTHR36529 1 222 5.8E-41 T 22-04-2016 SRM_RS09305 ba68c6c93e3320010071faf3ad06a4c0 183 SUPERFAMILY SSF46565 3 64 5.23E-16 T 22-04-2016 IPR001623 DnaJ domain SRM_RS09305 ba68c6c93e3320010071faf3ad06a4c0 183 PRINTS PR00625 DnaJ domain signature 5 23 5.4E-12 T 22-04-2016 IPR001623 DnaJ domain SRM_RS09305 ba68c6c93e3320010071faf3ad06a4c0 183 PRINTS PR00625 DnaJ domain signature 42 62 5.4E-12 T 22-04-2016 IPR001623 DnaJ domain SRM_RS09305 ba68c6c93e3320010071faf3ad06a4c0 183 PRINTS PR00625 DnaJ domain signature 23 38 5.4E-12 T 22-04-2016 IPR001623 DnaJ domain SRM_RS09305 ba68c6c93e3320010071faf3ad06a4c0 183 PANTHER PTHR24078 3 61 2.7E-15 T 22-04-2016 SRM_RS09305 ba68c6c93e3320010071faf3ad06a4c0 183 SMART SM00271 2 62 3.6E-17 T 22-04-2016 IPR001623 DnaJ domain SRM_RS09305 ba68c6c93e3320010071faf3ad06a4c0 183 Pfam PF00226 DnaJ domain 3 62 5.7E-17 T 22-04-2016 IPR001623 DnaJ domain SRM_RS09305 ba68c6c93e3320010071faf3ad06a4c0 183 Gene3D G3DSA:1.10.287.110 3 62 2.0E-17 T 22-04-2016 IPR001623 DnaJ domain SRM_RS09305 ba68c6c93e3320010071faf3ad06a4c0 183 PANTHER PTHR24078:SF166 3 61 2.7E-15 T 22-04-2016 SRM_RS05245 e292ecae7a0e52c41366f5837774d0f7 315 Pfam PF00589 Phage integrase family 125 299 8.7E-22 T 22-04-2016 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 SRM_RS05245 e292ecae7a0e52c41366f5837774d0f7 315 Pfam PF02899 Phage integrase, N-terminal SAM-like domain 23 98 4.7E-8 T 22-04-2016 IPR004107 Integrase, SAM-like, N-terminal GO:0003677|GO:0015074 SRM_RS05245 e292ecae7a0e52c41366f5837774d0f7 315 Gene3D G3DSA:1.10.150.130 24 112 4.5E-11 T 22-04-2016 IPR023109 Integrase/recombinase, N-terminal SRM_RS05245 e292ecae7a0e52c41366f5837774d0f7 315 PANTHER PTHR30349 19 296 5.9E-42 T 22-04-2016 SRM_RS05245 e292ecae7a0e52c41366f5837774d0f7 315 SUPERFAMILY SSF56349 20 305 1.29E-37 T 22-04-2016 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 SRM_RS05245 e292ecae7a0e52c41366f5837774d0f7 315 PANTHER PTHR30349:SF5 19 296 5.9E-42 T 22-04-2016 SRM_RS05245 e292ecae7a0e52c41366f5837774d0f7 315 Gene3D G3DSA:1.10.443.10 125 298 1.7E-36 T 22-04-2016 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 SRM_RS08190 6af0271b26d8a1014662494cb5d46270 487 PANTHER PTHR30508 2 487 3.4E-278 T 22-04-2016 SRM_RS08190 6af0271b26d8a1014662494cb5d46270 487 SUPERFAMILY SSF101960 37 81 5.1E-127 T 22-04-2016 SRM_RS08190 6af0271b26d8a1014662494cb5d46270 487 SUPERFAMILY SSF101960 112 484 5.1E-127 T 22-04-2016 SRM_RS08190 6af0271b26d8a1014662494cb5d46270 487 TIGRFAM TIGR01980 sufB: FeS assembly protein SufB 16 478 1.9E-180 T 22-04-2016 IPR010231 SUF system FeS cluster assembly, SufB GO:0016226 SRM_RS08190 6af0271b26d8a1014662494cb5d46270 487 PANTHER PTHR30508:SF1 2 487 3.4E-278 T 22-04-2016 SRM_RS08190 6af0271b26d8a1014662494cb5d46270 487 Pfam PF01458 Uncharacterized protein family (UPF0051) 224 458 2.1E-65 T 22-04-2016 IPR000825 SUF system FeS cluster assembly, SufBD GO:0016226 SRM_RS09785 3ee829973f7aa3dc01586d51e7655a5d 103 Pfam PF04066 Multiple resistance and pH regulation protein F (MrpF / PhaF) 37 89 3.8E-21 T 22-04-2016 IPR007208 Na(+)/H(+) antiporter subunit F-like GO:0015075|GO:0016021|GO:0034220 SRM_RS09785 3ee829973f7aa3dc01586d51e7655a5d 103 PIRSF PIRSF028784 4 98 7.5E-33 T 22-04-2016 IPR007208 Na(+)/H(+) antiporter subunit F-like GO:0015075|GO:0016021|GO:0034220 SRM_RS09785 3ee829973f7aa3dc01586d51e7655a5d 103 PANTHER PTHR34702 1 102 6.0E-25 T 22-04-2016 SRM_RS09785 3ee829973f7aa3dc01586d51e7655a5d 103 PANTHER PTHR34702:SF1 1 102 6.0E-25 T 22-04-2016 SRM_RS05805 10cb32c318c4943984e7d370c3be92e6 84 Pfam PF01649 Ribosomal protein S20 2 80 1.2E-24 T 22-04-2016 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 SRM_RS05805 10cb32c318c4943984e7d370c3be92e6 84 ProDom PD004231 RIBOSOMAL S20 30S RRNA-BINDING RNA-BINDING RIBONUCLEOPROTEIN S20P SUBUNIT CHLOROPLAST DIRECT 32 83 6.0E-7 T 22-04-2016 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 SRM_RS05805 10cb32c318c4943984e7d370c3be92e6 84 PANTHER PTHR33398 1 84 5.1E-23 T 22-04-2016 SRM_RS05805 10cb32c318c4943984e7d370c3be92e6 84 Gene3D G3DSA:1.20.58.110 1 83 6.3E-26 T 22-04-2016 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 SRM_RS05805 10cb32c318c4943984e7d370c3be92e6 84 TIGRFAM TIGR00029 S20: ribosomal protein bS20 1 82 1.0E-22 T 22-04-2016 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 SRM_RS05805 10cb32c318c4943984e7d370c3be92e6 84 Hamap MF_00500 30S ribosomal protein S20 [rpsT]. 1 82 16.293 T 22-04-2016 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 SRM_RS05805 10cb32c318c4943984e7d370c3be92e6 84 SUPERFAMILY SSF46992 3 83 1.44E-23 T 22-04-2016 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 SRM_RS08245 a859cd46235296efb5bfa53dd32318cc 431 PANTHER PTHR11014:SF63 13 409 7.8E-120 T 22-04-2016 SRM_RS08245 a859cd46235296efb5bfa53dd32318cc 431 Gene3D G3DSA:3.40.630.10 316 406 4.7E-85 T 22-04-2016 SRM_RS08245 a859cd46235296efb5bfa53dd32318cc 431 Gene3D G3DSA:3.40.630.10 18 195 4.7E-85 T 22-04-2016 SRM_RS08245 a859cd46235296efb5bfa53dd32318cc 431 TIGRFAM TIGR01891 amidohydrolases: amidohydrolase 31 390 4.5E-98 T 22-04-2016 IPR017439 Amidohydrolase GO:0016787 SRM_RS08245 a859cd46235296efb5bfa53dd32318cc 431 SUPERFAMILY SSF53187 316 405 1.16E-68 T 22-04-2016 SRM_RS08245 a859cd46235296efb5bfa53dd32318cc 431 SUPERFAMILY SSF53187 21 216 1.16E-68 T 22-04-2016 SRM_RS08245 a859cd46235296efb5bfa53dd32318cc 431 PANTHER PTHR11014 13 409 7.8E-120 T 22-04-2016 SRM_RS08245 a859cd46235296efb5bfa53dd32318cc 431 Pfam PF07687 Peptidase dimerisation domain 212 296 4.1E-11 T 22-04-2016 IPR011650 Peptidase M20, dimerisation domain SRM_RS08245 a859cd46235296efb5bfa53dd32318cc 431 PIRSF PIRSF005962 17 409 5.4E-131 T 22-04-2016 IPR017439 Amidohydrolase GO:0016787 SRM_RS08245 a859cd46235296efb5bfa53dd32318cc 431 Pfam PF01546 Peptidase family M20/M25/M40 91 401 5.8E-27 T 22-04-2016 IPR002933 Peptidase M20 GO:0008152|GO:0016787 SRM_RS08245 a859cd46235296efb5bfa53dd32318cc 431 Gene3D G3DSA:3.30.70.360 198 315 1.4E-30 T 22-04-2016 IPR011650 Peptidase M20, dimerisation domain SRM_RS08245 a859cd46235296efb5bfa53dd32318cc 431 SUPERFAMILY SSF55031 212 313 3.59E-21 T 22-04-2016 IPR011650 Peptidase M20, dimerisation domain SRM_RS08360 d353a704d9051b064f3972cd52e3ece8 348 Gene3D G3DSA:3.90.1150.10 251 339 1.0E-25 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 SRM_RS08360 d353a704d9051b064f3972cd52e3ece8 348 SUPERFAMILY SSF53383 4 340 6.05E-115 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase SRM_RS08360 d353a704d9051b064f3972cd52e3ece8 348 PANTHER PTHR10289:SF5 4 336 1.1E-138 T 22-04-2016 SRM_RS08360 d353a704d9051b064f3972cd52e3ece8 348 Gene3D G3DSA:3.40.640.10 2 249 1.1E-81 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 SRM_RS08360 d353a704d9051b064f3972cd52e3ece8 348 PIRSF PIRSF017617 1 348 9.1E-124 T 22-04-2016 IPR023603 Threonine aldolase SRM_RS08360 d353a704d9051b064f3972cd52e3ece8 348 Pfam PF01212 Beta-eliminating lyase 5 286 4.9E-90 T 22-04-2016 IPR001597 Aromatic amino acid beta-eliminating lyase/threonine aldolase GO:0006520|GO:0016829 SRM_RS08360 d353a704d9051b064f3972cd52e3ece8 348 PANTHER PTHR10289 4 336 1.1E-138 T 22-04-2016 SRM_RS09075 5b2e91a93a4b22ed83fa7719d07ef4a4 258 Hamap MF_01014 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase [hisA]. 3 241 34.159 T 22-04-2016 IPR023016 Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase GO:0000105|GO:0003949 KEGG: 00340+5.3.1.16|UniPathway: UPA00031 SRM_RS09075 5b2e91a93a4b22ed83fa7719d07ef4a4 258 Gene3D G3DSA:3.20.20.70 4 238 1.5E-82 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 SRM_RS09075 5b2e91a93a4b22ed83fa7719d07ef4a4 258 TIGRFAM TIGR00007 TIGR00007: 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide isomerase 4 237 1.1E-82 T 22-04-2016 IPR006063 Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase HisA GO:0000105|GO:0003949 KEGG: 00340+5.3.1.16|UniPathway: UPA00031 SRM_RS09075 5b2e91a93a4b22ed83fa7719d07ef4a4 258 PANTHER PTHR21235:SF15 3 253 7.0E-94 T 22-04-2016 SRM_RS09075 5b2e91a93a4b22ed83fa7719d07ef4a4 258 SUPERFAMILY SSF51366 4 241 7.4E-68 T 22-04-2016 IPR011060 Ribulose-phosphate binding barrel GO:0003824|GO:0008152 SRM_RS09075 5b2e91a93a4b22ed83fa7719d07ef4a4 258 Pfam PF00977 Histidine biosynthesis protein 4 233 2.4E-79 T 22-04-2016 IPR006062 Histidine biosynthesis GO:0000105 SRM_RS09075 5b2e91a93a4b22ed83fa7719d07ef4a4 258 PANTHER PTHR21235 3 253 7.0E-94 T 22-04-2016 SRM_RS02815 cb1299f38f3898abd468da2b89013089 156 PANTHER PTHR11911 98 153 2.1E-22 T 22-04-2016 SRM_RS02815 cb1299f38f3898abd468da2b89013089 156 PANTHER PTHR11911 3 57 2.1E-22 T 22-04-2016 SRM_RS02815 cb1299f38f3898abd468da2b89013089 156 SUPERFAMILY SSF54631 3 154 3.79E-30 T 22-04-2016 SRM_RS02815 cb1299f38f3898abd468da2b89013089 156 Gene3D G3DSA:3.10.580.10 6 153 7.2E-27 T 22-04-2016 SRM_RS02815 cb1299f38f3898abd468da2b89013089 156 SMART SM00116 107 154 3.8E-6 T 22-04-2016 IPR000644 CBS domain SRM_RS02815 cb1299f38f3898abd468da2b89013089 156 SMART SM00116 13 60 6.9E-7 T 22-04-2016 IPR000644 CBS domain SRM_RS02815 cb1299f38f3898abd468da2b89013089 156 Pfam PF00571 CBS domain 101 153 9.8E-10 T 22-04-2016 IPR000644 CBS domain SRM_RS02815 cb1299f38f3898abd468da2b89013089 156 Pfam PF00571 CBS domain 6 57 5.3E-13 T 22-04-2016 IPR000644 CBS domain SRM_RS12595 14d5d4534cd9d389177bd1de5d3f4560 347 Gene3D G3DSA:3.40.50.1820 73 327 1.1E-30 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold SRM_RS12595 14d5d4534cd9d389177bd1de5d3f4560 347 PIRSF PIRSF005211 7 346 5.7E-89 T 22-04-2016 IPR012020 AB hydrolase 4 family KEGG: 00051+3.1.1.-|KEGG: 00053+3.1.1.-|KEGG: 00363+3.1.1.-|KEGG: 00365+3.1.1.-|KEGG: 00534+3.1.1.-|KEGG: 00564+3.1.1.-|KEGG: 00623+3.1.1.-|KEGG: 00640+3.1.1.-|KEGG: 00830+3.1.1.-|KEGG: 00900+3.1.1.-|KEGG: 00940+3.1.1.-|KEGG: 00960+3.1.1.- SRM_RS12595 14d5d4534cd9d389177bd1de5d3f4560 347 SUPERFAMILY SSF53474 62 326 1.23E-41 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold SRM_RS12595 14d5d4534cd9d389177bd1de5d3f4560 347 Pfam PF00561 alpha/beta hydrolase fold 88 324 4.2E-15 T 22-04-2016 IPR000073 Alpha/beta hydrolase fold-1 SRM_RS12595 14d5d4534cd9d389177bd1de5d3f4560 347 PANTHER PTHR10794 30 346 5.9E-50 T 22-04-2016 SRM_RS12595 14d5d4534cd9d389177bd1de5d3f4560 347 PANTHER PTHR10794:SF46 30 346 5.9E-50 T 22-04-2016 SRM_RS09195 b33c2cd2a03c890b19acc16b7a7dc3a1 278 SUPERFAMILY SSF110997 203 266 1.26E-7 T 22-04-2016 IPR007730 Sporulation-related domain GO:0042834 SRM_RS09195 b33c2cd2a03c890b19acc16b7a7dc3a1 278 Pfam PF05036 Sporulation related domain 202 262 1.7E-10 T 22-04-2016 IPR007730 Sporulation-related domain GO:0042834 SRM_RS09195 b33c2cd2a03c890b19acc16b7a7dc3a1 278 Gene3D G3DSA:3.30.70.1070 199 262 1.4E-5 T 22-04-2016 IPR007730 Sporulation-related domain GO:0042834 SRM_RS15700 cf439c4c810b4d54bb406a78eb1ba304 454 PANTHER PTHR32347 379 441 1.8E-48 T 22-04-2016 SRM_RS15700 cf439c4c810b4d54bb406a78eb1ba304 454 PANTHER PTHR32347 50 303 1.8E-48 T 22-04-2016 SRM_RS15700 cf439c4c810b4d54bb406a78eb1ba304 454 PANTHER PTHR32347 327 356 1.8E-48 T 22-04-2016 SRM_RS15700 cf439c4c810b4d54bb406a78eb1ba304 454 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 69 275 1.2E-17 T 22-04-2016 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain SRM_RS15700 cf439c4c810b4d54bb406a78eb1ba304 454 Gene3D G3DSA:2.40.50.100 191 217 6.4E-16 T 22-04-2016 SRM_RS15700 cf439c4c810b4d54bb406a78eb1ba304 454 Gene3D G3DSA:2.40.50.100 69 102 6.4E-16 T 22-04-2016 SRM_RS15700 cf439c4c810b4d54bb406a78eb1ba304 454 PANTHER PTHR32347:SF12 379 441 1.8E-48 T 22-04-2016 SRM_RS15700 cf439c4c810b4d54bb406a78eb1ba304 454 PANTHER PTHR32347:SF12 50 303 1.8E-48 T 22-04-2016 SRM_RS15700 cf439c4c810b4d54bb406a78eb1ba304 454 PANTHER PTHR32347:SF12 327 356 1.8E-48 T 22-04-2016 SRM_RS15700 cf439c4c810b4d54bb406a78eb1ba304 454 SUPERFAMILY SSF111369 58 253 7.32E-23 T 22-04-2016 SRM_RS15700 cf439c4c810b4d54bb406a78eb1ba304 454 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 44 313 6.2E-41 T 22-04-2016 IPR006143 RND efflux pump, membrane fusion protein GO:0016020|GO:0055085 SRM_RS11605 aa28f7d5fa02b7ca6c69b36d2b2e4b05 145 Gene3D G3DSA:3.40.140.10 4 126 5.0E-26 T 22-04-2016 SRM_RS11605 aa28f7d5fa02b7ca6c69b36d2b2e4b05 145 SUPERFAMILY SSF102712 5 130 2.35E-27 T 22-04-2016 SRM_RS11605 aa28f7d5fa02b7ca6c69b36d2b2e4b05 145 SMART SM00232 1 128 2.0E-6 T 22-04-2016 IPR000555 JAB1/MPN/MOV34 metalloenzyme domain GO:0005515 SRM_RS11605 aa28f7d5fa02b7ca6c69b36d2b2e4b05 145 Pfam PF14464 Prokaryotic homologs of the JAB domain 6 123 5.9E-24 T 22-04-2016 IPR028090 JAB domain, prokaryotic SRM_RS14570 79c551d4563197438a272cb148139363 135 Pfam PF05400 Flagellar protein FliT 18 111 1.2E-13 T 22-04-2016 IPR008622 Flagellar protein FliT SRM_RS02690 74c31bbb82637d4e9463f7db9ada0c17 174 PANTHER PTHR38465 1 169 2.7E-22 T 22-04-2016 SRM_RS02690 74c31bbb82637d4e9463f7db9ada0c17 174 PIRSF PIRSF006707 1 172 6.3E-27 T 22-04-2016 IPR026282 DNA-binding protein, MJ1563 type SRM_RS02690 74c31bbb82637d4e9463f7db9ada0c17 174 SUPERFAMILY SSF46785 11 143 2.42E-16 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SRM_RS02690 74c31bbb82637d4e9463f7db9ada0c17 174 Pfam PF13463 Winged helix DNA-binding domain 40 85 1.1E-4 T 22-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 SRM_RS02690 74c31bbb82637d4e9463f7db9ada0c17 174 Gene3D G3DSA:1.10.10.10 10 88 7.0E-17 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SRM_RS04030 571c9e9bfbc4fd26b0da1b8170998b42 419 PANTHER PTHR12526 8 415 5.9E-44 T 22-04-2016 SRM_RS04030 571c9e9bfbc4fd26b0da1b8170998b42 419 Gene3D G3DSA:3.40.50.2000 197 392 2.4E-8 T 22-04-2016 SRM_RS04030 571c9e9bfbc4fd26b0da1b8170998b42 419 Pfam PF13579 Glycosyl transferase 4-like domain 23 207 5.1E-13 T 22-04-2016 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain SRM_RS04030 571c9e9bfbc4fd26b0da1b8170998b42 419 PANTHER PTHR12526:SF301 8 415 5.9E-44 T 22-04-2016 SRM_RS04030 571c9e9bfbc4fd26b0da1b8170998b42 419 SUPERFAMILY SSF53756 8 414 7.53E-43 T 22-04-2016 SRM_RS04030 571c9e9bfbc4fd26b0da1b8170998b42 419 Pfam PF00534 Glycosyl transferases group 1 229 393 1.4E-18 T 22-04-2016 IPR001296 Glycosyl transferase, family 1 SRM_RS13365 9e347fef7a95d85f42e2eb9a2990e1fd 372 Gene3D G3DSA:2.130.10.10 39 363 8.7E-45 T 22-04-2016 IPR015943 WD40/YVTN repeat-like-containing domain GO:0005515 SRM_RS13365 9e347fef7a95d85f42e2eb9a2990e1fd 372 SUPERFAMILY SSF50974 18 362 3.14E-46 T 22-04-2016 IPR011045 Nitrous oxide reductase, N-terminal SRM_RS06355 b454f912e804b0c7f1bf9138a1ddfff2 172 Pfam PF00730 HhH-GPD superfamily base excision DNA repair protein 51 132 2.6E-6 T 22-04-2016 IPR003265 HhH-GPD domain GO:0006284 Reactome: REACT_216 SRM_RS06355 b454f912e804b0c7f1bf9138a1ddfff2 172 SUPERFAMILY SSF48150 38 156 9.62E-8 T 22-04-2016 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: REACT_216 SRM_RS06355 b454f912e804b0c7f1bf9138a1ddfff2 172 Gene3D G3DSA:1.10.340.30 39 154 1.1E-7 T 22-04-2016 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: REACT_216 SRM_RS10295 0744c0cf96f0cb5087af33ad074e1492 242 SUPERFAMILY SSF117070 119 225 4.84E-7 T 22-04-2016 SRM_RS11545 5d2819440c4831b53207159f08994843 332 SUPERFAMILY SSF52540 113 327 6.34E-22 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SRM_RS11545 5d2819440c4831b53207159f08994843 332 PANTHER PTHR13696 53 326 1.6E-19 T 22-04-2016 SRM_RS11545 5d2819440c4831b53207159f08994843 332 PANTHER PTHR13696:SF54 53 326 1.6E-19 T 22-04-2016 SRM_RS11545 5d2819440c4831b53207159f08994843 332 Pfam PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain 121 267 3.9E-15 T 22-04-2016 IPR002586 CobQ/CobB/MinD/ParA nucleotide binding domain SRM_RS11545 5d2819440c4831b53207159f08994843 332 Gene3D G3DSA:3.40.50.300 121 327 1.7E-19 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SRM_RS12225 4d05ac9a1124b43880a457ca41fecc48 263 SUPERFAMILY SSF53167 1 249 2.22E-34 T 22-04-2016 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 SRM_RS12225 4d05ac9a1124b43880a457ca41fecc48 263 Gene3D G3DSA:3.40.50.1580 2 249 1.6E-35 T 22-04-2016 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 SRM_RS12225 4d05ac9a1124b43880a457ca41fecc48 263 Pfam PF01048 Phosphorylase superfamily 15 247 3.4E-27 T 22-04-2016 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 SRM_RS03645 59ed2940eb11a4661be81b19831d9605 279 PANTHER PTHR11825 3 277 7.2E-87 T 22-04-2016 IPR001544 Aminotransferase class IV GO:0003824|GO:0008152 Reactome: REACT_13 SRM_RS03645 59ed2940eb11a4661be81b19831d9605 279 SUPERFAMILY SSF56752 3 274 2.88E-75 T 22-04-2016 IPR001544 Aminotransferase class IV GO:0003824|GO:0008152 Reactome: REACT_13 SRM_RS03645 59ed2940eb11a4661be81b19831d9605 279 Gene3D G3DSA:3.30.470.10 2 116 4.3E-30 T 22-04-2016 SRM_RS03645 59ed2940eb11a4661be81b19831d9605 279 PANTHER PTHR11825:SF38 3 277 7.2E-87 T 22-04-2016 SRM_RS03645 59ed2940eb11a4661be81b19831d9605 279 Pfam PF01063 Amino-transferase class IV 29 251 1.8E-45 T 22-04-2016 IPR001544 Aminotransferase class IV GO:0003824|GO:0008152 Reactome: REACT_13 SRM_RS03645 59ed2940eb11a4661be81b19831d9605 279 Gene3D G3DSA:3.20.10.10 122 275 2.1E-46 T 22-04-2016 SRM_RS08830 f9265347a530cb0fcab3c8cb774ef117 168 PANTHER PTHR10681 10 160 5.7E-33 T 22-04-2016 SRM_RS08830 f9265347a530cb0fcab3c8cb774ef117 168 Gene3D G3DSA:3.40.30.10 5 159 5.9E-42 T 22-04-2016 IPR012336 Thioredoxin-like fold SRM_RS08830 f9265347a530cb0fcab3c8cb774ef117 168 PANTHER PTHR10681:SF121 10 160 5.7E-33 T 22-04-2016 SRM_RS08830 f9265347a530cb0fcab3c8cb774ef117 168 SUPERFAMILY SSF52833 6 159 2.06E-35 T 22-04-2016 IPR012336 Thioredoxin-like fold SRM_RS08830 f9265347a530cb0fcab3c8cb774ef117 168 Pfam PF00578 AhpC/TSA family 10 136 2.8E-28 T 22-04-2016 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15 SRM_RS05965 d3c559117567878b71a8e1659a1831c1 455 SUPERFAMILY SSF51246 332 445 4.81E-46 T 22-04-2016 IPR011054 Rudiment single hybrid motif SRM_RS05965 d3c559117567878b71a8e1659a1831c1 455 SUPERFAMILY SSF52440 4 115 5.47E-49 T 22-04-2016 IPR016185 Pre-ATP-grasp domain SRM_RS05965 d3c559117567878b71a8e1659a1831c1 455 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 288 295 - T 22-04-2016 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 SRM_RS05965 d3c559117567878b71a8e1659a1831c1 455 SUPERFAMILY SSF56059 85 353 1.06E-66 T 22-04-2016 SRM_RS05965 d3c559117567878b71a8e1659a1831c1 455 Pfam PF02785 Biotin carboxylase C-terminal domain 337 443 3.5E-43 T 22-04-2016 IPR005482 Biotin carboxylase, C-terminal SRM_RS05965 d3c559117567878b71a8e1659a1831c1 455 Gene3D G3DSA:3.30.1490.20 131 204 7.4E-28 T 22-04-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 SRM_RS05965 d3c559117567878b71a8e1659a1831c1 455 Gene3D G3DSA:3.30.470.20 205 444 3.0E-101 T 22-04-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 SRM_RS05965 d3c559117567878b71a8e1659a1831c1 455 Gene3D G3DSA:3.40.50.20 4 130 1.8E-50 T 22-04-2016 IPR016185 Pre-ATP-grasp domain SRM_RS05965 d3c559117567878b71a8e1659a1831c1 455 SMART SM00878 337 443 3.5E-66 T 22-04-2016 IPR005482 Biotin carboxylase, C-terminal SRM_RS05965 d3c559117567878b71a8e1659a1831c1 455 PANTHER PTHR18866 4 446 2.0E-279 T 22-04-2016 SRM_RS05965 d3c559117567878b71a8e1659a1831c1 455 TIGRFAM TIGR00514 accC: acetyl-CoA carboxylase, biotin carboxylase subunit 4 446 2.2E-213 T 22-04-2016 IPR004549 Acetyl-CoA carboxylase, biotin carboxylase GO:0016874 SRM_RS05965 d3c559117567878b71a8e1659a1831c1 455 Pfam PF00289 Biotin carboxylase, N-terminal domain 4 112 1.2E-44 T 22-04-2016 IPR005481 Biotin carboxylase-like, N-terminal domain SRM_RS05965 d3c559117567878b71a8e1659a1831c1 455 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 118 324 2.3E-74 T 22-04-2016 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 SRM_RS09290 07a8c922dc3678e19f71368320ae708d 472 SUPERFAMILY SSF55424 349 471 7.22E-38 T 22-04-2016 IPR016156 FAD/NAD-linked reductase, dimerisation domain GO:0016491|GO:0050660|GO:0055114 SRM_RS09290 07a8c922dc3678e19f71368320ae708d 472 PANTHER PTHR22912 1 120 3.9E-188 T 22-04-2016 SRM_RS09290 07a8c922dc3678e19f71368320ae708d 472 PANTHER PTHR22912 142 465 3.9E-188 T 22-04-2016 SRM_RS09290 07a8c922dc3678e19f71368320ae708d 472 PIRSF PIRSF000350 1 465 4.8E-82 T 22-04-2016 SRM_RS09290 07a8c922dc3678e19f71368320ae708d 472 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 7 26 3.3E-35 T 22-04-2016 SRM_RS09290 07a8c922dc3678e19f71368320ae708d 472 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 183 201 3.3E-35 T 22-04-2016 SRM_RS09290 07a8c922dc3678e19f71368320ae708d 472 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 270 286 3.3E-35 T 22-04-2016 SRM_RS09290 07a8c922dc3678e19f71368320ae708d 472 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 144 162 3.3E-35 T 22-04-2016 SRM_RS09290 07a8c922dc3678e19f71368320ae708d 472 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 298 320 3.3E-35 T 22-04-2016 SRM_RS09290 07a8c922dc3678e19f71368320ae708d 472 Gene3D G3DSA:3.50.50.60 148 340 2.2E-53 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SRM_RS09290 07a8c922dc3678e19f71368320ae708d 472 SUPERFAMILY SSF51905 2 343 1.48E-61 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SRM_RS09290 07a8c922dc3678e19f71368320ae708d 472 PANTHER PTHR22912:SF125 1 120 3.9E-188 T 22-04-2016 SRM_RS09290 07a8c922dc3678e19f71368320ae708d 472 PANTHER PTHR22912:SF125 142 465 3.9E-188 T 22-04-2016 SRM_RS09290 07a8c922dc3678e19f71368320ae708d 472 Pfam PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain 353 461 5.1E-34 T 22-04-2016 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 SRM_RS09290 07a8c922dc3678e19f71368320ae708d 472 TIGRFAM TIGR01350 lipoamide_DH: dihydrolipoyl dehydrogenase 5 471 1.1E-168 T 22-04-2016 IPR006258 Dihydrolipoamide dehydrogenase GO:0004148|GO:0050660|GO:0055114 KEGG: 00010+1.8.1.4|KEGG: 00020+1.8.1.4|KEGG: 00260+1.8.1.4|KEGG: 00280+1.8.1.4|KEGG: 00620+1.8.1.4|KEGG: 00640+1.8.1.4|MetaCyc: PWY-5046|MetaCyc: PWY-5084 SRM_RS09290 07a8c922dc3678e19f71368320ae708d 472 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 5 333 4.3E-70 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SRM_RS09290 07a8c922dc3678e19f71368320ae708d 472 Gene3D G3DSA:3.50.50.60 4 147 9.3E-40 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SRM_RS09290 07a8c922dc3678e19f71368320ae708d 472 Gene3D G3DSA:3.30.390.30 341 469 4.8E-47 T 22-04-2016 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 SRM_RS09290 07a8c922dc3678e19f71368320ae708d 472 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 349 370 3.8E-63 T 22-04-2016 SRM_RS09290 07a8c922dc3678e19f71368320ae708d 472 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 6 28 3.8E-63 T 22-04-2016 SRM_RS09290 07a8c922dc3678e19f71368320ae708d 472 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 313 320 3.8E-63 T 22-04-2016 SRM_RS09290 07a8c922dc3678e19f71368320ae708d 472 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 414 429 3.8E-63 T 22-04-2016 SRM_RS09290 07a8c922dc3678e19f71368320ae708d 472 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 183 208 3.8E-63 T 22-04-2016 SRM_RS09290 07a8c922dc3678e19f71368320ae708d 472 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 147 156 3.8E-63 T 22-04-2016 SRM_RS09290 07a8c922dc3678e19f71368320ae708d 472 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 271 285 3.8E-63 T 22-04-2016 SRM_RS09290 07a8c922dc3678e19f71368320ae708d 472 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 38 53 3.8E-63 T 22-04-2016 SRM_RS09290 07a8c922dc3678e19f71368320ae708d 472 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 436 456 3.8E-63 T 22-04-2016 SRM_RS09290 07a8c922dc3678e19f71368320ae708d 472 ProSitePatterns PS00076 Pyridine nucleotide-disulphide oxidoreductases class-I active site. 39 49 - T 22-04-2016 IPR012999 Pyridine nucleotide-disulphide oxidoreductase, class I, active site GO:0016668|GO:0055114 SRM_RS06100 836a9375d7d39d91cb9eb4ee09b05fa4 92 Gene3D G3DSA:3.30.1280.10 1 81 3.0E-31 T 22-04-2016 IPR003850 Phosphoribosylformylglycinamidine synthase subunit PurS KEGG: 00230+6.3.5.3|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|UniPathway: UPA00074 SRM_RS06100 836a9375d7d39d91cb9eb4ee09b05fa4 92 Hamap MF_01926 Phosphoribosylformylglycinamidine synthase subunit PurS [purS]. 2 79 22.139 T 22-04-2016 IPR003850 Phosphoribosylformylglycinamidine synthase subunit PurS KEGG: 00230+6.3.5.3|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|UniPathway: UPA00074 SRM_RS06100 836a9375d7d39d91cb9eb4ee09b05fa4 92 SUPERFAMILY SSF82697 2 78 1.74E-26 T 22-04-2016 SRM_RS06100 836a9375d7d39d91cb9eb4ee09b05fa4 92 Pfam PF02700 Phosphoribosylformylglycinamidine (FGAM) synthase 3 79 6.8E-30 T 22-04-2016 IPR003850 Phosphoribosylformylglycinamidine synthase subunit PurS KEGG: 00230+6.3.5.3|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|UniPathway: UPA00074 SRM_RS06100 836a9375d7d39d91cb9eb4ee09b05fa4 92 TIGRFAM TIGR00302 TIGR00302: phosphoribosylformylglycinamidine synthase, purS protein 2 80 1.4E-26 T 22-04-2016 IPR003850 Phosphoribosylformylglycinamidine synthase subunit PurS KEGG: 00230+6.3.5.3|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|UniPathway: UPA00074 SRM_RS06100 836a9375d7d39d91cb9eb4ee09b05fa4 92 ProDom PD010362 PHOSPHORIBOSYLFORMYLGLYCINAMIDINE PURS SYNTHETASE SYNTHASE COMPONENT SYNTHASE LIGASE FGAM UPF0062 I 10 80 7.0E-18 T 22-04-2016 IPR003850 Phosphoribosylformylglycinamidine synthase subunit PurS KEGG: 00230+6.3.5.3|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|UniPathway: UPA00074 SRM_RS06100 836a9375d7d39d91cb9eb4ee09b05fa4 92 PANTHER PTHR34696 1 85 1.1E-33 T 22-04-2016 SRM_RS09735 73ba34c12114ff6487a7a3ebe0343ae2 257 PANTHER PTHR13903 14 248 8.0E-72 T 22-04-2016 IPR012093 Pirin SRM_RS09735 73ba34c12114ff6487a7a3ebe0343ae2 257 SUPERFAMILY SSF51182 14 248 2.59E-56 T 22-04-2016 IPR011051 RmlC-like cupin domain SRM_RS09735 73ba34c12114ff6487a7a3ebe0343ae2 257 Gene3D G3DSA:2.60.120.10 16 248 7.1E-54 T 22-04-2016 IPR014710 RmlC-like jelly roll fold SRM_RS09735 73ba34c12114ff6487a7a3ebe0343ae2 257 PANTHER PTHR13903:SF7 14 248 8.0E-72 T 22-04-2016 SRM_RS09735 73ba34c12114ff6487a7a3ebe0343ae2 257 Pfam PF02678 Pirin 23 131 2.3E-22 T 22-04-2016 IPR003829 Pirin, N-terminal domain SRM_RS07720 d8ff50f3ecefe4162f5fc8398895467d 436 SUPERFAMILY SSF51261 142 376 1.15E-57 T 22-04-2016 IPR011055 Duplicated hybrid motif SRM_RS07720 d8ff50f3ecefe4162f5fc8398895467d 436 Pfam PF01551 Peptidase family M23 281 375 5.4E-31 T 22-04-2016 IPR016047 Peptidase M23 SRM_RS07720 d8ff50f3ecefe4162f5fc8398895467d 436 Gene3D G3DSA:2.70.70.10 238 377 4.5E-45 T 22-04-2016 SRM_RS07720 d8ff50f3ecefe4162f5fc8398895467d 436 PANTHER PTHR21666 175 396 1.4E-54 T 22-04-2016 SRM_RS07720 d8ff50f3ecefe4162f5fc8398895467d 436 PANTHER PTHR21666:SF221 175 396 1.4E-54 T 22-04-2016 SRM_RS05535 5fa797673bb72815cd3bbf62ca96a89f 395 PANTHER PTHR11669:SF8 134 254 3.0E-57 T 22-04-2016 SRM_RS05535 5fa797673bb72815cd3bbf62ca96a89f 395 PANTHER PTHR11669:SF8 1 87 3.0E-57 T 22-04-2016 SRM_RS05535 5fa797673bb72815cd3bbf62ca96a89f 395 Gene3D G3DSA:1.10.8.60 201 260 1.4E-8 T 22-04-2016 SRM_RS05535 5fa797673bb72815cd3bbf62ca96a89f 395 SUPERFAMILY SSF52540 127 251 4.0E-46 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SRM_RS05535 5fa797673bb72815cd3bbf62ca96a89f 395 SUPERFAMILY SSF52540 3 83 4.0E-46 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SRM_RS05535 5fa797673bb72815cd3bbf62ca96a89f 395 PANTHER PTHR11669 134 254 3.0E-57 T 22-04-2016 SRM_RS05535 5fa797673bb72815cd3bbf62ca96a89f 395 PANTHER PTHR11669 1 87 3.0E-57 T 22-04-2016 SRM_RS05535 5fa797673bb72815cd3bbf62ca96a89f 395 Gene3D G3DSA:3.40.50.300 4 82 2.3E-51 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SRM_RS05535 5fa797673bb72815cd3bbf62ca96a89f 395 Gene3D G3DSA:3.40.50.300 126 200 2.3E-51 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SRM_RS05535 5fa797673bb72815cd3bbf62ca96a89f 395 Pfam PF13177 DNA polymerase III, delta subunit 9 212 8.6E-47 T 22-04-2016 SRM_RS06180 556095dff9005e09be9eff4679119231 1166 Pfam PF01336 OB-fold nucleic acid binding domain 1003 1077 3.1E-7 T 22-04-2016 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type GO:0003676 SRM_RS06180 556095dff9005e09be9eff4679119231 1166 SUPERFAMILY SSF89550 5 262 8.63E-34 T 22-04-2016 IPR016195 Polymerase/histidinol phosphatase-like GO:0003824 SRM_RS06180 556095dff9005e09be9eff4679119231 1166 SMART SM00481 5 72 4.0E-26 T 22-04-2016 IPR003141 Polymerase/histidinol phosphatase, N-terminal GO:0003677|GO:0003887|GO:0006260 SRM_RS06180 556095dff9005e09be9eff4679119231 1166 PANTHER PTHR32294 1 1166 0.0 T 22-04-2016 SRM_RS06180 556095dff9005e09be9eff4679119231 1166 PANTHER PTHR32294:SF0 1 1166 0.0 T 22-04-2016 SRM_RS06180 556095dff9005e09be9eff4679119231 1166 Gene3D G3DSA:3.20.20.140 5 250 1.9E-48 T 22-04-2016 SRM_RS06180 556095dff9005e09be9eff4679119231 1166 Pfam PF02811 PHP domain 6 174 1.6E-52 T 22-04-2016 IPR004013 PHP domain GO:0003824 SRM_RS06180 556095dff9005e09be9eff4679119231 1166 TIGRFAM TIGR00594 polc: DNA polymerase III, alpha subunit 4 1039 0.0 T 22-04-2016 IPR004805 DNA polymerase III, alpha subunit GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 SRM_RS06180 556095dff9005e09be9eff4679119231 1166 Pfam PF14579 Helix-hairpin-helix motif 800 894 1.7E-27 T 22-04-2016 IPR029460 DNA polymerase, helix-hairpin-helix motif KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 SRM_RS06180 556095dff9005e09be9eff4679119231 1166 Pfam PF07733 Bacterial DNA polymerase III alpha subunit 299 725 6.7E-177 T 22-04-2016 IPR011708 Bacterial DNA polymerase III, alpha subunit GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 SRM_RS06180 556095dff9005e09be9eff4679119231 1166 Gene3D G3DSA:2.40.50.140 999 1074 1.4E-4 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold SRM_RS06180 556095dff9005e09be9eff4679119231 1166 Gene3D G3DSA:1.10.150.280 831 881 1.2E-5 T 22-04-2016 SRM_RS02880 20907f0631ef58d84a5afc7fe1a02dfe 124 Pfam PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 21 121 1.0E-29 T 22-04-2016 IPR000440 NADH:ubiquinone/plastoquinone oxidoreductase, chain 3 GO:0008137|GO:0055114 SRM_RS02880 20907f0631ef58d84a5afc7fe1a02dfe 124 PANTHER PTHR11058 5 121 2.1E-35 T 22-04-2016 IPR000440 NADH:ubiquinone/plastoquinone oxidoreductase, chain 3 GO:0008137|GO:0055114 SRM_RS02880 20907f0631ef58d84a5afc7fe1a02dfe 124 PANTHER PTHR11058:SF5 5 121 2.1E-35 T 22-04-2016 SRM_RS02880 20907f0631ef58d84a5afc7fe1a02dfe 124 Hamap MF_01394 NAD(P)H-quinone oxidoreductase subunit 3, chloroplastic [ndhC]. 1 123 17.261 T 22-04-2016 IPR023043 NAD(P)H-quinone oxidoreductase subunit 3, bacterial/plastid GO:0016651|GO:0055114 SRM_RS15920 be4225a2c55a53ed71cfd2288cf44746 665 TIGRFAM TIGR04183 Por_Secre_tail: Por secretion system C-terminal sorting domain 585 663 3.8E-9 T 22-04-2016 IPR026444 Secretion system C-terminal sorting domain SRM_RS12035 aaad5c418553beac8e524d54c7973278 96 SUPERFAMILY SSF50129 2 95 4.12E-32 T 22-04-2016 IPR011032 GroES-like SRM_RS12035 aaad5c418553beac8e524d54c7973278 96 PANTHER PTHR10772 1 95 2.6E-44 T 22-04-2016 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 SRM_RS12035 aaad5c418553beac8e524d54c7973278 96 Pfam PF00166 Chaperonin 10 Kd subunit 4 94 3.6E-34 T 22-04-2016 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 SRM_RS12035 aaad5c418553beac8e524d54c7973278 96 Hamap MF_00580 10 kDa chaperonin [groS]. 3 95 24.883 T 22-04-2016 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 SRM_RS12035 aaad5c418553beac8e524d54c7973278 96 Gene3D G3DSA:2.30.33.40 3 95 1.3E-37 T 22-04-2016 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 SRM_RS12035 aaad5c418553beac8e524d54c7973278 96 PRINTS PR00297 10kDa chaperonin signature 26 47 1.2E-29 T 22-04-2016 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 SRM_RS12035 aaad5c418553beac8e524d54c7973278 96 PRINTS PR00297 10kDa chaperonin signature 60 72 1.2E-29 T 22-04-2016 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 SRM_RS12035 aaad5c418553beac8e524d54c7973278 96 PRINTS PR00297 10kDa chaperonin signature 81 94 1.2E-29 T 22-04-2016 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 SRM_RS12035 aaad5c418553beac8e524d54c7973278 96 PRINTS PR00297 10kDa chaperonin signature 4 19 1.2E-29 T 22-04-2016 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 SRM_RS12035 aaad5c418553beac8e524d54c7973278 96 SMART SM00883 3 94 1.7E-52 T 22-04-2016 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 SRM_RS12035 aaad5c418553beac8e524d54c7973278 96 ProSitePatterns PS00681 Chaperonins cpn10 signature. 4 28 - T 22-04-2016 IPR018369 Chaperonin GroES, conserved site GO:0005524|GO:0006457 SRM_RS11365 f6d5dc05be3fc6a8f7d00e4d60eed4d2 144 Pfam PF13426 PAS domain 36 115 2.5E-11 T 22-04-2016 IPR000014 PAS domain SRM_RS11365 f6d5dc05be3fc6a8f7d00e4d60eed4d2 144 SUPERFAMILY SSF55785 38 113 1.74E-17 T 22-04-2016 IPR000014 PAS domain SRM_RS11365 f6d5dc05be3fc6a8f7d00e4d60eed4d2 144 Gene3D G3DSA:3.30.450.20 36 116 4.0E-22 T 22-04-2016 SRM_RS11365 f6d5dc05be3fc6a8f7d00e4d60eed4d2 144 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 36 116 4.3E-14 T 22-04-2016 IPR000014 PAS domain SRM_RS14490 0e51fb74ff9058ed2ed71c1c24bf7a5b 133 TIGRFAM TIGR02530 flg_new: flagellar operon protein 37 131 3.5E-26 T 22-04-2016 IPR013367 Flagellar, putative SRM_RS14490 0e51fb74ff9058ed2ed71c1c24bf7a5b 133 Pfam PF12611 Protein of unknown function (DUF3766) 109 130 2.6E-11 T 22-04-2016 IPR013367 Flagellar, putative SRM_RS16025 266045f0412e70375fd65a0a4f7db44b 213 Pfam PF16156 Domain of unknown function (DUF4864) 91 190 1.3E-7 T 22-04-2016 IPR032347 Protein of unknown function DUF4864 SRM_RS16025 266045f0412e70375fd65a0a4f7db44b 213 PANTHER PTHR35716:SF1 83 198 2.6E-13 T 22-04-2016 SRM_RS16025 266045f0412e70375fd65a0a4f7db44b 213 PANTHER PTHR35716 83 198 2.6E-13 T 22-04-2016 SRM_RS14525 47de9ddca8566add4db646411dc0b314 349 Pfam PF14842 FliG N-terminal domain 20 122 6.7E-30 T 22-04-2016 IPR028263 Flagellar motor switch protein FliG, N-terminal domain SRM_RS14525 47de9ddca8566add4db646411dc0b314 349 PANTHER PTHR30534:SF0 7 348 3.6E-88 T 22-04-2016 SRM_RS14525 47de9ddca8566add4db646411dc0b314 349 PRINTS PR00954 Flagellar motor switch protein FliG signature 129 152 2.6E-60 T 22-04-2016 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 SRM_RS14525 47de9ddca8566add4db646411dc0b314 349 PRINTS PR00954 Flagellar motor switch protein FliG signature 287 313 2.6E-60 T 22-04-2016 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 SRM_RS14525 47de9ddca8566add4db646411dc0b314 349 PRINTS PR00954 Flagellar motor switch protein FliG signature 210 235 2.6E-60 T 22-04-2016 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 SRM_RS14525 47de9ddca8566add4db646411dc0b314 349 PRINTS PR00954 Flagellar motor switch protein FliG signature 241 261 2.6E-60 T 22-04-2016 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 SRM_RS14525 47de9ddca8566add4db646411dc0b314 349 PRINTS PR00954 Flagellar motor switch protein FliG signature 263 283 2.6E-60 T 22-04-2016 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 SRM_RS14525 47de9ddca8566add4db646411dc0b314 349 PRINTS PR00954 Flagellar motor switch protein FliG signature 49 75 2.6E-60 T 22-04-2016 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 SRM_RS14525 47de9ddca8566add4db646411dc0b314 349 PRINTS PR00954 Flagellar motor switch protein FliG signature 20 36 2.6E-60 T 22-04-2016 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 SRM_RS14525 47de9ddca8566add4db646411dc0b314 349 SUPERFAMILY SSF48029 21 115 3.14E-20 T 22-04-2016 IPR011002 Flagellar motor switch protein FliG, alpha-helical SRM_RS14525 47de9ddca8566add4db646411dc0b314 349 Pfam PF01706 FliG C-terminal domain 233 339 3.9E-33 T 22-04-2016 IPR023087 Flagellar motor switch protein FliG, C-terminal SRM_RS14525 47de9ddca8566add4db646411dc0b314 349 PIRSF PIRSF003161 14 349 4.7E-121 T 22-04-2016 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 SRM_RS14525 47de9ddca8566add4db646411dc0b314 349 TIGRFAM TIGR00207 fliG: flagellar motor switch protein FliG 17 348 1.2E-101 T 22-04-2016 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 SRM_RS14525 47de9ddca8566add4db646411dc0b314 349 SUPERFAMILY SSF48029 130 339 3.14E-59 T 22-04-2016 IPR011002 Flagellar motor switch protein FliG, alpha-helical SRM_RS14525 47de9ddca8566add4db646411dc0b314 349 Pfam PF14841 FliG middle domain 131 201 4.7E-27 T 22-04-2016 IPR032779 Flagellar motor switch protein FliG, middle domain SRM_RS14525 47de9ddca8566add4db646411dc0b314 349 Gene3D G3DSA:1.10.220.30 88 201 7.8E-28 T 22-04-2016 IPR011002 Flagellar motor switch protein FliG, alpha-helical SRM_RS14525 47de9ddca8566add4db646411dc0b314 349 Gene3D G3DSA:1.10.220.30 210 348 1.2E-35 T 22-04-2016 IPR011002 Flagellar motor switch protein FliG, alpha-helical SRM_RS14525 47de9ddca8566add4db646411dc0b314 349 PANTHER PTHR30534 7 348 3.6E-88 T 22-04-2016 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 SRM_RS14525 47de9ddca8566add4db646411dc0b314 349 Gene3D G3DSA:1.10.220.30 22 82 5.1E-13 T 22-04-2016 IPR011002 Flagellar motor switch protein FliG, alpha-helical SRM_RS02355 fe0895470fef94d7d733e140f9f24d0d 105 Pfam PF10825 Protein of unknown function (DUF2752) 46 91 3.7E-11 T 22-04-2016 IPR021215 Protein of unknown function DUF2752 SRM_RS07445 9f7d423a12dafcba8e38fede61384af3 746 PANTHER PTHR24423 188 328 5.2E-89 T 22-04-2016 SRM_RS07445 9f7d423a12dafcba8e38fede61384af3 746 PANTHER PTHR24423 497 728 5.2E-89 T 22-04-2016 SRM_RS07445 9f7d423a12dafcba8e38fede61384af3 746 PRINTS PR00344 Bacterial sensor protein C-terminal signature 674 684 6.4E-16 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SRM_RS07445 9f7d423a12dafcba8e38fede61384af3 746 PRINTS PR00344 Bacterial sensor protein C-terminal signature 691 709 6.4E-16 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SRM_RS07445 9f7d423a12dafcba8e38fede61384af3 746 PRINTS PR00344 Bacterial sensor protein C-terminal signature 656 670 6.4E-16 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SRM_RS07445 9f7d423a12dafcba8e38fede61384af3 746 PRINTS PR00344 Bacterial sensor protein C-terminal signature 715 728 6.4E-16 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SRM_RS07445 9f7d423a12dafcba8e38fede61384af3 746 Pfam PF00512 His Kinase A (phospho-acceptor) domain 499 574 9.4E-14 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SRM_RS07445 9f7d423a12dafcba8e38fede61384af3 746 SMART SM00388 499 574 2.0E-14 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SRM_RS07445 9f7d423a12dafcba8e38fede61384af3 746 Gene3D G3DSA:3.30.450.40 312 474 4.1E-12 T 22-04-2016 IPR029016 GAF domain-like SRM_RS07445 9f7d423a12dafcba8e38fede61384af3 746 SUPERFAMILY SSF55874 565 729 2.49E-40 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SRM_RS07445 9f7d423a12dafcba8e38fede61384af3 746 Pfam PF13426 PAS domain 214 310 2.4E-9 T 22-04-2016 IPR000014 PAS domain SRM_RS07445 9f7d423a12dafcba8e38fede61384af3 746 SMART SM00387 620 731 1.2E-33 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SRM_RS07445 9f7d423a12dafcba8e38fede61384af3 746 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 621 728 4.7E-24 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SRM_RS07445 9f7d423a12dafcba8e38fede61384af3 746 Gene3D G3DSA:3.30.565.10 575 731 2.0E-41 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SRM_RS07445 9f7d423a12dafcba8e38fede61384af3 746 SUPERFAMILY SSF55785 188 309 2.44E-18 T 22-04-2016 IPR000014 PAS domain SRM_RS07445 9f7d423a12dafcba8e38fede61384af3 746 SMART SM00091 197 265 5.7E-5 T 22-04-2016 IPR000014 PAS domain SRM_RS07445 9f7d423a12dafcba8e38fede61384af3 746 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 194 318 2.5E-17 T 22-04-2016 IPR000014 PAS domain SRM_RS07445 9f7d423a12dafcba8e38fede61384af3 746 Gene3D G3DSA:1.10.287.130 492 570 3.1E-13 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SRM_RS07445 9f7d423a12dafcba8e38fede61384af3 746 SUPERFAMILY SSF55781 306 472 1.66E-13 T 22-04-2016 IPR029016 GAF domain-like SRM_RS07445 9f7d423a12dafcba8e38fede61384af3 746 SMART SM00086 269 311 1.5E-6 T 22-04-2016 IPR001610 PAC motif SRM_RS07445 9f7d423a12dafcba8e38fede61384af3 746 Gene3D G3DSA:3.30.450.20 191 309 6.5E-20 T 22-04-2016 SRM_RS07445 9f7d423a12dafcba8e38fede61384af3 746 SUPERFAMILY SSF47384 487 575 8.63E-15 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SRM_RS07445 9f7d423a12dafcba8e38fede61384af3 746 SMART SM00065 340 480 0.0071 T 22-04-2016 IPR003018 GAF domain GO:0005515 SRM_RS04385 17f0b062fca0236bfff9c57812d0abe4 81 Pfam PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system 1 62 8.6E-9 T 22-04-2016 IPR006442 Type II toxin-antitoxin system, antitoxin Phd/YefM SRM_RS04385 17f0b062fca0236bfff9c57812d0abe4 81 TIGRFAM TIGR01552 phd_fam: prevent-host-death family protein 4 46 3.0E-7 T 22-04-2016 IPR006442 Type II toxin-antitoxin system, antitoxin Phd/YefM SRM_RS04385 17f0b062fca0236bfff9c57812d0abe4 81 Gene3D G3DSA:3.40.1620.10 1 38 2.0E-5 T 22-04-2016 IPR006442 Type II toxin-antitoxin system, antitoxin Phd/YefM SRM_RS04385 17f0b062fca0236bfff9c57812d0abe4 81 SUPERFAMILY SSF143120 1 45 1.26E-7 T 22-04-2016 SRM_RS05925 eec4efa4d56cccf1d724dfd78387bdfe 499 Pfam PF03109 ABC1 family 168 271 3.9E-27 T 22-04-2016 IPR004147 UbiB domain SRM_RS05925 eec4efa4d56cccf1d724dfd78387bdfe 499 Gene3D G3DSA:3.90.1200.10 300 375 4.0E-8 T 22-04-2016 SRM_RS05925 eec4efa4d56cccf1d724dfd78387bdfe 499 PANTHER PTHR10566 47 481 2.0E-72 T 22-04-2016 SRM_RS05925 eec4efa4d56cccf1d724dfd78387bdfe 499 Pfam PF01636 Phosphotransferase enzyme family 280 359 5.5E-7 T 22-04-2016 IPR002575 Aminoglycoside phosphotransferase SRM_RS05925 eec4efa4d56cccf1d724dfd78387bdfe 499 SUPERFAMILY SSF56112 246 394 9.98E-27 T 22-04-2016 IPR011009 Protein kinase-like domain SRM_RS05925 eec4efa4d56cccf1d724dfd78387bdfe 499 SUPERFAMILY SSF56112 149 212 9.98E-27 T 22-04-2016 IPR011009 Protein kinase-like domain SRM_RS02750 14bd8e8743c930e61aee809e66ec8aae 568 SUPERFAMILY SSF48452 60 560 1.77E-116 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 SRM_RS02750 14bd8e8743c930e61aee809e66ec8aae 568 Pfam PF12771 Starch-binding associating with outer membrane 47 557 3.0E-66 T 22-04-2016 SRM_RS02750 14bd8e8743c930e61aee809e66ec8aae 568 PANTHER PTHR35148 36 564 1.6E-66 T 22-04-2016 SRM_RS05045 02ce9d2c47c5a8e1bb2a8047aee7e438 238 Hamap MF_00528 Septum formation protein Maf [maf]. 44 232 29.554 T 22-04-2016 IPR003697 Maf-like protein GO:0005737 SRM_RS05045 02ce9d2c47c5a8e1bb2a8047aee7e438 238 PANTHER PTHR11746 164 224 5.7E-17 T 22-04-2016 SRM_RS05045 02ce9d2c47c5a8e1bb2a8047aee7e438 238 Gene3D G3DSA:3.90.950.10 44 227 2.4E-65 T 22-04-2016 IPR029001 Inosine triphosphate pyrophosphatase-like SRM_RS05045 02ce9d2c47c5a8e1bb2a8047aee7e438 238 Pfam PF02545 Maf-like protein 45 226 3.7E-54 T 22-04-2016 IPR003697 Maf-like protein GO:0005737 SRM_RS05045 02ce9d2c47c5a8e1bb2a8047aee7e438 238 TIGRFAM TIGR00172 maf: septum formation protein Maf 44 226 3.7E-54 T 22-04-2016 IPR003697 Maf-like protein GO:0005737 SRM_RS05045 02ce9d2c47c5a8e1bb2a8047aee7e438 238 SUPERFAMILY SSF52972 43 226 2.29E-60 T 22-04-2016 IPR029001 Inosine triphosphate pyrophosphatase-like SRM_RS14380 47be923539f21e69375394db0f906b74 258 TIGRFAM TIGR01400 fliR: flagellar biosynthetic protein FliR 10 252 2.5E-55 T 22-04-2016 IPR006303 Flagellar biosynthesis protein FliR GO:0016021|GO:0044780 SRM_RS14380 47be923539f21e69375394db0f906b74 258 Pfam PF01311 Bacterial export proteins, family 1 11 242 2.5E-63 T 22-04-2016 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 SRM_RS14380 47be923539f21e69375394db0f906b74 258 PANTHER PTHR30065:SF1 1 258 4.1E-53 T 22-04-2016 SRM_RS14380 47be923539f21e69375394db0f906b74 258 PANTHER PTHR30065 1 258 4.1E-53 T 22-04-2016 SRM_RS14380 47be923539f21e69375394db0f906b74 258 PRINTS PR00953 Type III secretion system inner membrane R protein family signature 78 97 4.3E-27 T 22-04-2016 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 SRM_RS14380 47be923539f21e69375394db0f906b74 258 PRINTS PR00953 Type III secretion system inner membrane R protein family signature 177 199 4.3E-27 T 22-04-2016 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 SRM_RS14380 47be923539f21e69375394db0f906b74 258 PRINTS PR00953 Type III secretion system inner membrane R protein family signature 18 39 4.3E-27 T 22-04-2016 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 SRM_RS14380 47be923539f21e69375394db0f906b74 258 PRINTS PR00953 Type III secretion system inner membrane R protein family signature 199 218 4.3E-27 T 22-04-2016 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 SRM_RS11930 b4b5965e3218b77aa7aeea456f2dfc4f 420 PANTHER PTHR34856:SF4 18 411 4.1E-82 T 22-04-2016 SRM_RS11930 b4b5965e3218b77aa7aeea456f2dfc4f 420 PANTHER PTHR34856 18 411 4.1E-82 T 22-04-2016 SRM_RS08930 62f0112384f4c63a810361fe22ca2cf2 127 SMART SM00448 7 120 2.0E-25 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SRM_RS08930 62f0112384f4c63a810361fe22ca2cf2 127 Pfam PF00072 Response regulator receiver domain 9 121 1.2E-18 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SRM_RS08930 62f0112384f4c63a810361fe22ca2cf2 127 SUPERFAMILY SSF52172 6 125 1.57E-27 T 22-04-2016 IPR011006 CheY-like superfamily SRM_RS08930 62f0112384f4c63a810361fe22ca2cf2 127 Gene3D G3DSA:3.40.50.2300 3 125 2.2E-30 T 22-04-2016 SRM_RS08930 62f0112384f4c63a810361fe22ca2cf2 127 PANTHER PTHR26402 7 121 2.0E-23 T 22-04-2016 SRM_RS11615 61f9aac7e8a0ed34358cb9fa489a5caf 405 Pfam PF00581 Rhodanese-like domain 305 396 9.0E-9 T 22-04-2016 IPR001763 Rhodanese-like domain SRM_RS11615 61f9aac7e8a0ed34358cb9fa489a5caf 405 Pfam PF00899 ThiF family 23 257 1.1E-68 T 22-04-2016 IPR000594 THIF-type NAD/FAD binding fold GO:0008641 SRM_RS11615 61f9aac7e8a0ed34358cb9fa489a5caf 405 Gene3D G3DSA:3.40.250.10 299 404 3.3E-24 T 22-04-2016 IPR001763 Rhodanese-like domain SRM_RS11615 61f9aac7e8a0ed34358cb9fa489a5caf 405 Gene3D G3DSA:3.40.50.720 15 260 3.5E-80 T 22-04-2016 IPR016040 NAD(P)-binding domain SRM_RS11615 61f9aac7e8a0ed34358cb9fa489a5caf 405 PANTHER PTHR10953 8 405 2.1E-159 T 22-04-2016 SRM_RS11615 61f9aac7e8a0ed34358cb9fa489a5caf 405 SUPERFAMILY SSF69572 8 373 1.96E-107 T 22-04-2016 IPR000594 THIF-type NAD/FAD binding fold GO:0008641 SRM_RS11615 61f9aac7e8a0ed34358cb9fa489a5caf 405 SMART SM00450 304 400 3.4E-22 T 22-04-2016 IPR001763 Rhodanese-like domain SRM_RS11615 61f9aac7e8a0ed34358cb9fa489a5caf 405 PANTHER PTHR10953:SF153 8 405 2.1E-159 T 22-04-2016 SRM_RS07175 7db5c20794d4862478e45a4d756fe70e 137 Pfam PF13586 Transposase DDE domain 47 132 9.4E-22 T 22-04-2016 IPR025668 Transposase DDE domain SRM_RS07175 7db5c20794d4862478e45a4d756fe70e 137 PANTHER PTHR30007:SF22 1 137 1.4E-27 T 22-04-2016 SRM_RS07175 7db5c20794d4862478e45a4d756fe70e 137 PANTHER PTHR30007 1 137 1.4E-27 T 22-04-2016 SRM_RS15715 00b33116a429b51f1ed83dbd0da177f7 414 PANTHER PTHR30572:SF7 1 414 5.7E-77 T 22-04-2016 SRM_RS15715 00b33116a429b51f1ed83dbd0da177f7 414 PANTHER PTHR30572 1 414 5.7E-77 T 22-04-2016 SRM_RS15715 00b33116a429b51f1ed83dbd0da177f7 414 Pfam PF02687 FtsX-like permease family 296 407 1.7E-20 T 22-04-2016 IPR003838 ABC transporter permease protein domain GO:0016020 SRM_RS15715 00b33116a429b51f1ed83dbd0da177f7 414 Pfam PF12704 MacB-like periplasmic core domain 26 253 8.6E-36 T 22-04-2016 IPR025857 MacB-like periplasmic core domain SRM_RS16060 e9d12ba2480b554b39aba463b95c1404 134 Pfam PF03600 Citrate transporter 17 111 4.5E-15 T 22-04-2016 IPR004680 Citrate transporter-like domain GO:0016021|GO:0055085 SRM_RS16060 e9d12ba2480b554b39aba463b95c1404 134 PANTHER PTHR10283:SF100 1 113 1.9E-17 T 22-04-2016 SRM_RS16060 e9d12ba2480b554b39aba463b95c1404 134 PANTHER PTHR10283 1 113 1.9E-17 T 22-04-2016 SRM_RS15340 8e148375a56b8d26fef676b064d199dc 477 Pfam PF03553 Na+/H+ antiporter family 169 474 1.3E-41 T 22-04-2016 IPR018461 Na+/H+ antiporter, NhaC-like, C-terminal GO:0016021 SRM_RS15340 8e148375a56b8d26fef676b064d199dc 477 PANTHER PTHR33451:SF7 3 474 4.8E-113 T 22-04-2016 SRM_RS15340 8e148375a56b8d26fef676b064d199dc 477 PANTHER PTHR33451 3 474 4.8E-113 T 22-04-2016 SRM_RS00835 19bc96dfb6f90d93b6c01ac997310692 78 Gene3D G3DSA:2.30.170.40 2 77 1.8E-29 T 22-04-2016 SRM_RS00835 19bc96dfb6f90d93b6c01ac997310692 78 Pfam PF00830 Ribosomal L28 family 3 62 5.4E-22 T 22-04-2016 IPR026569 Ribosomal protein L28/L24 GO:0003735 SRM_RS00835 19bc96dfb6f90d93b6c01ac997310692 78 Hamap MF_00373 50S ribosomal protein L28 [rpmB]. 1 71 17.814 T 22-04-2016 IPR001383 Ribosomal protein L28 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SRM_RS00835 19bc96dfb6f90d93b6c01ac997310692 78 TIGRFAM TIGR00009 L28: ribosomal protein bL28 1 58 7.5E-21 T 22-04-2016 IPR001383 Ribosomal protein L28 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SRM_RS00835 19bc96dfb6f90d93b6c01ac997310692 78 SUPERFAMILY SSF143800 2 77 4.32E-24 T 22-04-2016 SRM_RS08145 2db951c0b1c9c050e6f26bd8a878b1db 437 Gene3D G3DSA:1.25.40.10 322 399 6.2E-10 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 SRM_RS08145 2db951c0b1c9c050e6f26bd8a878b1db 437 Pfam PF13240 zinc-ribbon domain 78 99 7.2E-7 T 22-04-2016 IPR026870 Zinc-ribbon domain SRM_RS08145 2db951c0b1c9c050e6f26bd8a878b1db 437 SUPERFAMILY SSF48452 281 404 2.46E-10 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 SRM_RS05440 1b0d84355738bfa5af8ff046b5692db6 437 Hamap MF_00127 Histidine--tRNA ligase [hisS]. 5 432 32.174 T 22-04-2016 IPR015807 Histidine-tRNA ligase GO:0004821|GO:0005524|GO:0006427 KEGG: 00970+6.1.1.21|Reactome: REACT_71 SRM_RS05440 1b0d84355738bfa5af8ff046b5692db6 437 Gene3D G3DSA:3.30.930.10 7 197 7.3E-88 T 22-04-2016 SRM_RS05440 1b0d84355738bfa5af8ff046b5692db6 437 Gene3D G3DSA:3.30.930.10 233 332 7.3E-88 T 22-04-2016 SRM_RS05440 1b0d84355738bfa5af8ff046b5692db6 437 PIRSF PIRSF001549 4 433 9.8E-117 T 22-04-2016 IPR004516 Histidine-tRNA ligase/ATP phosphoribosyltransferase regulatory subunit GO:0005737 Reactome: REACT_71 SRM_RS05440 1b0d84355738bfa5af8ff046b5692db6 437 PANTHER PTHR11476 6 437 2.4E-181 T 22-04-2016 IPR004516 Histidine-tRNA ligase/ATP phosphoribosyltransferase regulatory subunit GO:0005737 Reactome: REACT_71 SRM_RS05440 1b0d84355738bfa5af8ff046b5692db6 437 Gene3D G3DSA:3.40.50.800 340 430 1.6E-31 T 22-04-2016 IPR004154 Anticodon-binding SRM_RS05440 1b0d84355738bfa5af8ff046b5692db6 437 TIGRFAM TIGR00442 hisS: histidine--tRNA ligase 8 422 7.2E-142 T 22-04-2016 IPR015807 Histidine-tRNA ligase GO:0004821|GO:0005524|GO:0006427 KEGG: 00970+6.1.1.21|Reactome: REACT_71 SRM_RS05440 1b0d84355738bfa5af8ff046b5692db6 437 PANTHER PTHR11476:SF9 6 437 2.4E-181 T 22-04-2016 SRM_RS05440 1b0d84355738bfa5af8ff046b5692db6 437 SUPERFAMILY SSF52954 340 431 4.53E-26 T 22-04-2016 IPR004154 Anticodon-binding SRM_RS05440 1b0d84355738bfa5af8ff046b5692db6 437 Pfam PF03129 Anticodon binding domain 343 431 2.1E-16 T 22-04-2016 IPR004154 Anticodon-binding SRM_RS05440 1b0d84355738bfa5af8ff046b5692db6 437 SUPERFAMILY SSF55681 8 336 3.58E-92 T 22-04-2016 SRM_RS05440 1b0d84355738bfa5af8ff046b5692db6 437 Pfam PF13393 Histidyl-tRNA synthetase 32 325 3.8E-46 T 22-04-2016 SRM_RS04580 76d8832ac7c229a88b9b2cf6e2066c73 363 TIGRFAM TIGR01430 aden_deam: adenosine deaminase 23 347 1.4E-91 T 22-04-2016 IPR006330 Adenosine/adenine deaminase GO:0019239 SRM_RS04580 76d8832ac7c229a88b9b2cf6e2066c73 363 SUPERFAMILY SSF51556 14 351 2.9E-81 T 22-04-2016 IPR032466 Metal-dependent hydrolase SRM_RS04580 76d8832ac7c229a88b9b2cf6e2066c73 363 Gene3D G3DSA:3.20.20.140 19 350 8.7E-109 T 22-04-2016 SRM_RS04580 76d8832ac7c229a88b9b2cf6e2066c73 363 PANTHER PTHR11409:SF43 7 350 3.3E-114 T 22-04-2016 SRM_RS04580 76d8832ac7c229a88b9b2cf6e2066c73 363 Pfam PF00962 Adenosine/AMP deaminase 23 345 1.1E-82 T 22-04-2016 IPR001365 Adenosine/AMP deaminase domain GO:0019239 SRM_RS04580 76d8832ac7c229a88b9b2cf6e2066c73 363 PANTHER PTHR11409 7 350 3.3E-114 T 22-04-2016 SRM_RS14465 0dd30285155325167f803f77e758b8a8 329 Gene3D G3DSA:1.10.287.500 51 201 5.0E-11 T 22-04-2016 SRM_RS14465 0dd30285155325167f803f77e758b8a8 329 Pfam PF04344 Chemotaxis phosphatase, CheZ 50 218 9.4E-7 T 22-04-2016 IPR007439 Chemotaxis phosphatase, CheZ GO:0003824|GO:0009288|GO:0050920 KEGG: 00051+3.1.3.-|KEGG: 00332+3.1.3.-|KEGG: 00565+3.1.3.-|KEGG: 00600+3.1.3.-|KEGG: 00730+3.1.3.-|KEGG: 00740+3.1.3.-|KEGG: 00760+3.1.3.- SRM_RS14465 0dd30285155325167f803f77e758b8a8 329 SUPERFAMILY SSF75708 24 223 2.75E-20 T 22-04-2016 SRM_RS08370 529a30353c2b91ef244bfe011b3923b8 309 PANTHER PTHR30237 2 309 2.7E-81 T 22-04-2016 SRM_RS08370 529a30353c2b91ef244bfe011b3923b8 309 SUPERFAMILY SSF141986 162 295 6.15E-39 T 22-04-2016 IPR027461 LD-carboxypeptidase A, C-terminal domain SRM_RS08370 529a30353c2b91ef244bfe011b3923b8 309 Pfam PF02016 LD-carboxypeptidase 14 291 1.5E-75 T 22-04-2016 IPR003507 Peptidase family S66 SRM_RS08370 529a30353c2b91ef244bfe011b3923b8 309 SUPERFAMILY SSF52317 3 158 5.04E-39 T 22-04-2016 IPR029062 Class I glutamine amidotransferase-like SRM_RS08370 529a30353c2b91ef244bfe011b3923b8 309 PANTHER PTHR30237:SF2 2 309 2.7E-81 T 22-04-2016 SRM_RS08370 529a30353c2b91ef244bfe011b3923b8 309 Gene3D G3DSA:3.50.30.60 167 298 1.6E-40 T 22-04-2016 IPR027461 LD-carboxypeptidase A, C-terminal domain SRM_RS08370 529a30353c2b91ef244bfe011b3923b8 309 PIRSF PIRSF028757 3 304 1.4E-75 T 22-04-2016 IPR003507 Peptidase family S66 SRM_RS08370 529a30353c2b91ef244bfe011b3923b8 309 Gene3D G3DSA:3.40.50.10740 3 156 2.9E-45 T 22-04-2016 IPR027478 Murein tetrapeptide carboxypeptidase, N-terminal domain SRM_RS07325 46e4227289dcc73c6a85123733e688ce 129 PANTHER PTHR30007:SF22 4 123 7.8E-23 T 22-04-2016 SRM_RS07325 46e4227289dcc73c6a85123733e688ce 129 Pfam PF13586 Transposase DDE domain 39 123 8.5E-22 T 22-04-2016 IPR025668 Transposase DDE domain SRM_RS07325 46e4227289dcc73c6a85123733e688ce 129 PANTHER PTHR30007 4 123 7.8E-23 T 22-04-2016 SRM_RS02685 f60e04f5834ed5dc716469d7f281a1c9 972 Gene3D G3DSA:3.40.390.10 539 620 5.9E-16 T 22-04-2016 IPR024079 Metallopeptidase, catalytic domain GO:0008237 SRM_RS02685 f60e04f5834ed5dc716469d7f281a1c9 972 Gene3D G3DSA:3.40.390.10 306 469 5.9E-16 T 22-04-2016 IPR024079 Metallopeptidase, catalytic domain GO:0008237 SRM_RS02685 f60e04f5834ed5dc716469d7f281a1c9 972 SUPERFAMILY SSF55486 292 449 2.19E-21 T 22-04-2016 SRM_RS02685 f60e04f5834ed5dc716469d7f281a1c9 972 SUPERFAMILY SSF55486 532 618 2.19E-21 T 22-04-2016 SRM_RS02685 f60e04f5834ed5dc716469d7f281a1c9 972 Pfam PF16313 Met-zincin 529 871 2.2E-101 T 22-04-2016 IPR032534 Domian of unknown function DUF4953 SRM_RS02685 f60e04f5834ed5dc716469d7f281a1c9 972 PANTHER PTHR38478 102 965 1.3E-154 T 22-04-2016 SRM_RS02685 f60e04f5834ed5dc716469d7f281a1c9 972 Pfam PF17148 Domain of unknown function (DUF5117) 158 344 5.5E-34 T 22-04-2016 IPR033413 Domain of unknown function DUF5117 SRM_RS03710 b359605c41e0f586fba31997023d63bb 650 SUPERFAMILY SSF54184 597 642 2.88E-6 T 22-04-2016 SRM_RS03710 b359605c41e0f586fba31997023d63bb 650 SUPERFAMILY SSF56519 53 223 1.16E-38 T 22-04-2016 IPR005311 Penicillin-binding protein, dimerisation domain GO:0008658 SRM_RS03710 b359605c41e0f586fba31997023d63bb 650 Pfam PF00905 Penicillin binding protein transpeptidase domain 249 553 2.7E-71 T 22-04-2016 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 SRM_RS03710 b359605c41e0f586fba31997023d63bb 650 SUPERFAMILY SSF56601 175 570 1.22E-93 T 22-04-2016 IPR012338 Beta-lactamase/transpeptidase-like SRM_RS03710 b359605c41e0f586fba31997023d63bb 650 Gene3D G3DSA:3.40.710.10 231 558 5.4E-89 T 22-04-2016 IPR012338 Beta-lactamase/transpeptidase-like SRM_RS03710 b359605c41e0f586fba31997023d63bb 650 PANTHER PTHR30627 1 592 1.6E-157 T 22-04-2016 SRM_RS03710 b359605c41e0f586fba31997023d63bb 650 Pfam PF03717 Penicillin-binding Protein dimerisation domain 56 205 4.8E-21 T 22-04-2016 IPR005311 Penicillin-binding protein, dimerisation domain GO:0008658 SRM_RS03710 b359605c41e0f586fba31997023d63bb 650 PANTHER PTHR30627:SF1 1 592 1.6E-157 T 22-04-2016 SRM_RS03710 b359605c41e0f586fba31997023d63bb 650 Gene3D G3DSA:3.90.1310.10 130 230 8.2E-26 T 22-04-2016 SRM_RS03710 b359605c41e0f586fba31997023d63bb 650 Pfam PF03793 PASTA domain 597 641 2.6E-5 T 22-04-2016 IPR005543 PASTA domain SRM_RS09970 259a93c2a30275a2ed607ba0d29d3be0 354 PANTHER PTHR12286 4 335 2.6E-54 T 22-04-2016 SRM_RS09970 259a93c2a30275a2ed607ba0d29d3be0 354 Gene3D G3DSA:3.40.50.720 2 143 1.4E-19 T 22-04-2016 IPR016040 NAD(P)-binding domain SRM_RS09970 259a93c2a30275a2ed607ba0d29d3be0 354 SUPERFAMILY SSF51735 1 141 7.32E-18 T 22-04-2016 IPR016040 NAD(P)-binding domain SRM_RS09970 259a93c2a30275a2ed607ba0d29d3be0 354 Pfam PF03435 Saccharopine dehydrogenase NADP binding domain 4 98 1.1E-10 T 22-04-2016 IPR005097 Saccharopine dehydrogenase, NADP binding domain GO:0016491|GO:0055114 SRM_RS09970 259a93c2a30275a2ed607ba0d29d3be0 354 PANTHER PTHR12286:SF4 4 335 2.6E-54 T 22-04-2016 SRM_RS10600 40e83fa37b24d68b9e5d318f5eae0cab 401 SUPERFAMILY SSF55347 139 277 1.57E-58 T 22-04-2016 SRM_RS10600 40e83fa37b24d68b9e5d318f5eae0cab 401 Gene3D G3DSA:3.40.50.720 10 163 9.9E-55 T 22-04-2016 IPR016040 NAD(P)-binding domain SRM_RS10600 40e83fa37b24d68b9e5d318f5eae0cab 401 Pfam PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase 18 145 2.4E-44 T 22-04-2016 IPR013512 1-deoxy-D-xylulose 5-phosphate reductoisomerase, N-terminal GO:0055114|GO:0070402 KEGG: 00630+1.1.1.26|KEGG: 00900+1.1.1.267|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7560|UniPathway: UPA00056 SRM_RS10600 40e83fa37b24d68b9e5d318f5eae0cab 401 Gene3D G3DSA:1.10.1740.10 316 395 4.8E-31 T 22-04-2016 SRM_RS10600 40e83fa37b24d68b9e5d318f5eae0cab 401 Pfam PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal 159 242 1.0E-39 T 22-04-2016 IPR013644 1-deoxy-D-xylulose 5-phosphate reductoisomerase, C-terminal GO:0005515 KEGG: 00630+1.1.1.26|KEGG: 00900+1.1.1.267|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7560|UniPathway: UPA00056 SRM_RS10600 40e83fa37b24d68b9e5d318f5eae0cab 401 PIRSF PIRSF006205 14 399 2.2E-155 T 22-04-2016 IPR003821 1-deoxy-D-xylulose 5-phosphate reductoisomerase GO:0008299|GO:0030604|GO:0046872|GO:0055114 KEGG: 00630+1.1.1.26|KEGG: 00900+1.1.1.267|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7560|UniPathway: UPA00056 SRM_RS10600 40e83fa37b24d68b9e5d318f5eae0cab 401 Pfam PF13288 DXP reductoisomerase C-terminal domain 274 390 2.3E-42 T 22-04-2016 IPR026877 DXP reductoisomerase C-terminal domain KEGG: 00630+1.1.1.26|KEGG: 00900+1.1.1.267|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7560|UniPathway: UPA00056 SRM_RS10600 40e83fa37b24d68b9e5d318f5eae0cab 401 SUPERFAMILY SSF51735 14 163 1.94E-41 T 22-04-2016 IPR016040 NAD(P)-binding domain SRM_RS10600 40e83fa37b24d68b9e5d318f5eae0cab 401 Hamap MF_00183 1-deoxy-D-xylulose 5-phosphate reductoisomerase [dxr]. 17 395 47.979 T 22-04-2016 IPR003821 1-deoxy-D-xylulose 5-phosphate reductoisomerase GO:0008299|GO:0030604|GO:0046872|GO:0055114 KEGG: 00630+1.1.1.26|KEGG: 00900+1.1.1.267|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7560|UniPathway: UPA00056 SRM_RS10600 40e83fa37b24d68b9e5d318f5eae0cab 401 PANTHER PTHR30525 11 395 1.1E-218 T 22-04-2016 IPR003821 1-deoxy-D-xylulose 5-phosphate reductoisomerase GO:0008299|GO:0030604|GO:0046872|GO:0055114 KEGG: 00630+1.1.1.26|KEGG: 00900+1.1.1.267|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7560|UniPathway: UPA00056 SRM_RS10600 40e83fa37b24d68b9e5d318f5eae0cab 401 SUPERFAMILY SSF69055 304 395 3.79E-32 T 22-04-2016 IPR026877 DXP reductoisomerase C-terminal domain KEGG: 00630+1.1.1.26|KEGG: 00900+1.1.1.267|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7560|UniPathway: UPA00056 SRM_RS10600 40e83fa37b24d68b9e5d318f5eae0cab 401 TIGRFAM TIGR00243 Dxr: 1-deoxy-D-xylulose 5-phosphate reductoisomerase 16 392 2.3E-148 T 22-04-2016 IPR003821 1-deoxy-D-xylulose 5-phosphate reductoisomerase GO:0008299|GO:0030604|GO:0046872|GO:0055114 KEGG: 00630+1.1.1.26|KEGG: 00900+1.1.1.267|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7560|UniPathway: UPA00056 SRM_RS07360 69c4f67857da6cd0107ea83e008a4fe7 341 PANTHER PTHR30472:SF32 9 341 6.4E-115 T 22-04-2016 SRM_RS07360 69c4f67857da6cd0107ea83e008a4fe7 341 SUPERFAMILY SSF81345 2 336 1.57E-79 T 22-04-2016 IPR029022 ABC transporter, BtuC-like SRM_RS07360 69c4f67857da6cd0107ea83e008a4fe7 341 PANTHER PTHR30472 9 341 6.4E-115 T 22-04-2016 IPR000522 ABC transporter, permease protein GO:0005215|GO:0016020 SRM_RS07360 69c4f67857da6cd0107ea83e008a4fe7 341 Pfam PF01032 FecCD transport family 15 335 2.6E-92 T 22-04-2016 IPR000522 ABC transporter, permease protein GO:0005215|GO:0016020 SRM_RS07360 69c4f67857da6cd0107ea83e008a4fe7 341 Gene3D G3DSA:1.10.3470.10 2 337 2.4E-107 T 22-04-2016 IPR029022 ABC transporter, BtuC-like SRM_RS02725 010655fd96bf87a6e18fac28d841018f 536 Gene3D G3DSA:1.25.40.10 231 474 1.7E-45 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 SRM_RS02725 010655fd96bf87a6e18fac28d841018f 536 Pfam PF14322 Starch-binding associating with outer membrane 115 251 1.7E-7 T 22-04-2016 SRM_RS02725 010655fd96bf87a6e18fac28d841018f 536 Pfam PF07980 SusD family 379 533 1.7E-32 T 22-04-2016 IPR012944 RagB/SusD domain SRM_RS02725 010655fd96bf87a6e18fac28d841018f 536 SUPERFAMILY SSF48452 29 533 6.57E-105 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 SRM_RS15175 91b58b1094a6578a99c76b8a62f31241 166 PANTHER PTHR30265 2 160 9.5E-21 T 22-04-2016 SRM_RS15175 91b58b1094a6578a99c76b8a62f31241 166 SUPERFAMILY SSF82679 2 94 6.41E-18 T 22-04-2016 IPR006645 NusG, N-terminal GO:0006355 SRM_RS15175 91b58b1094a6578a99c76b8a62f31241 166 Pfam PF02357 Transcription termination factor nusG 2 92 2.0E-15 T 22-04-2016 IPR006645 NusG, N-terminal GO:0006355 SRM_RS15175 91b58b1094a6578a99c76b8a62f31241 166 PANTHER PTHR30265:SF3 2 160 9.5E-21 T 22-04-2016 SRM_RS15175 91b58b1094a6578a99c76b8a62f31241 166 Gene3D G3DSA:3.30.70.940 2 94 8.8E-10 T 22-04-2016 IPR006645 NusG, N-terminal GO:0006355 SRM_RS05400 583d267b4767a6679001bf58ec0ef3a9 217 SUPERFAMILY SSF53335 22 163 7.03E-17 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SRM_RS05400 583d267b4767a6679001bf58ec0ef3a9 217 PANTHER PTHR10108:SF788 1 190 3.7E-81 T 22-04-2016 SRM_RS05400 583d267b4767a6679001bf58ec0ef3a9 217 PANTHER PTHR10108 1 190 3.7E-81 T 22-04-2016 SRM_RS05400 583d267b4767a6679001bf58ec0ef3a9 217 Pfam PF08241 Methyltransferase domain 87 145 2.2E-10 T 22-04-2016 IPR013216 Methyltransferase type 11 GO:0008152|GO:0008168 SRM_RS05400 583d267b4767a6679001bf58ec0ef3a9 217 Gene3D G3DSA:3.40.50.150 34 167 3.5E-16 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SRM_RS02905 e53d42a45f123031ffc81cbe2ad374ab 453 PANTHER PTHR11780:SF10 34 432 1.1E-183 T 22-04-2016 SRM_RS02905 e53d42a45f123031ffc81cbe2ad374ab 453 ProSitePatterns PS00645 Respiratory-chain NADH dehydrogenase 51 Kd subunit signature 2. 356 367 - T 22-04-2016 IPR001949 NADH:ubiquinone oxidoreductase, 51kDa subunit, conserved site GO:0008137|GO:0010181|GO:0051539|GO:0055114 SRM_RS02905 e53d42a45f123031ffc81cbe2ad374ab 453 SUPERFAMILY SSF140490 340 436 2.88E-32 T 22-04-2016 SRM_RS02905 e53d42a45f123031ffc81cbe2ad374ab 453 SUPERFAMILY SSF142984 255 338 2.22E-17 T 22-04-2016 SRM_RS02905 e53d42a45f123031ffc81cbe2ad374ab 453 ProSitePatterns PS00644 Respiratory-chain NADH dehydrogenase 51 Kd subunit signature 1. 180 195 - T 22-04-2016 IPR001949 NADH:ubiquinone oxidoreductase, 51kDa subunit, conserved site GO:0008137|GO:0010181|GO:0051539|GO:0055114 SRM_RS02905 e53d42a45f123031ffc81cbe2ad374ab 453 SUPERFAMILY SSF142019 26 247 9.81E-80 T 22-04-2016 SRM_RS02905 e53d42a45f123031ffc81cbe2ad374ab 453 Pfam PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region 346 428 1.4E-28 T 22-04-2016 IPR019575 NADH-ubiquinone oxidoreductase 51 kDa subunit, iron-sulphur binding domain GO:0051539 SRM_RS02905 e53d42a45f123031ffc81cbe2ad374ab 453 Pfam PF10531 SLBB domain 258 304 2.0E-10 T 22-04-2016 IPR019554 Soluble ligand binding domain SRM_RS02905 e53d42a45f123031ffc81cbe2ad374ab 453 Pfam PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit 61 232 5.9E-48 T 22-04-2016 IPR011538 NADH-ubiquinone oxidoreductase 51 kDa subunit, FMN-binding domain SRM_RS02905 e53d42a45f123031ffc81cbe2ad374ab 453 PANTHER PTHR11780 34 432 1.1E-183 T 22-04-2016 SRM_RS02905 e53d42a45f123031ffc81cbe2ad374ab 453 SMART SM00928 343 388 5.4E-24 T 22-04-2016 IPR019575 NADH-ubiquinone oxidoreductase 51 kDa subunit, iron-sulphur binding domain GO:0051539 SRM_RS11915 8c6d02436eabeddd0663eaf6d47dc55a 581 SUPERFAMILY SSF81442 28 534 1.57E-160 T 22-04-2016 IPR023616 Cytochrome c oxidase, subunit I domain GO:0004129|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 SRM_RS11915 8c6d02436eabeddd0663eaf6d47dc55a 581 PANTHER PTHR10422:SF6 17 535 5.0E-259 T 22-04-2016 SRM_RS11915 8c6d02436eabeddd0663eaf6d47dc55a 581 TIGRFAM TIGR02891 CtaD_CoxA: cytochrome c oxidase, subunit I 32 532 5.7E-212 T 22-04-2016 IPR014241 Cytochrome c oxidase, subunit I bacterial type GO:0004129|GO:0005507|GO:0005886|GO:0006810|GO:0022900|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 SRM_RS11915 8c6d02436eabeddd0663eaf6d47dc55a 581 ProSitePatterns PS00077 Heme-copper oxidase catalytic subunit, copper B binding region signature. 258 312 - T 22-04-2016 IPR023615 Cytochrome c oxidase, subunit I, copper-binding site GO:0004129|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 SRM_RS11915 8c6d02436eabeddd0663eaf6d47dc55a 581 PANTHER PTHR10422 17 535 5.0E-259 T 22-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 SRM_RS11915 8c6d02436eabeddd0663eaf6d47dc55a 581 Pfam PF00115 Cytochrome C and Quinol oxidase polypeptide I 40 479 1.4E-137 T 22-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 SRM_RS11915 8c6d02436eabeddd0663eaf6d47dc55a 581 Gene3D G3DSA:1.20.210.10 22 538 3.8E-174 T 22-04-2016 IPR023616 Cytochrome c oxidase, subunit I domain GO:0004129|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 SRM_RS11915 8c6d02436eabeddd0663eaf6d47dc55a 581 PRINTS PR01165 Cytochrome c oxidase subunit I signature 31 56 1.3E-95 T 22-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 SRM_RS11915 8c6d02436eabeddd0663eaf6d47dc55a 581 PRINTS PR01165 Cytochrome c oxidase subunit I signature 256 277 1.3E-95 T 22-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 SRM_RS11915 8c6d02436eabeddd0663eaf6d47dc55a 581 PRINTS PR01165 Cytochrome c oxidase subunit I signature 147 159 1.3E-95 T 22-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 SRM_RS11915 8c6d02436eabeddd0663eaf6d47dc55a 581 PRINTS PR01165 Cytochrome c oxidase subunit I signature 439 460 1.3E-95 T 22-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 SRM_RS11915 8c6d02436eabeddd0663eaf6d47dc55a 581 PRINTS PR01165 Cytochrome c oxidase subunit I signature 302 317 1.3E-95 T 22-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 SRM_RS11915 8c6d02436eabeddd0663eaf6d47dc55a 581 PRINTS PR01165 Cytochrome c oxidase subunit I signature 205 224 1.3E-95 T 22-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 SRM_RS11915 8c6d02436eabeddd0663eaf6d47dc55a 581 PRINTS PR01165 Cytochrome c oxidase subunit I signature 78 101 1.3E-95 T 22-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 SRM_RS11915 8c6d02436eabeddd0663eaf6d47dc55a 581 PRINTS PR01165 Cytochrome c oxidase subunit I signature 176 194 1.3E-95 T 22-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 SRM_RS11915 8c6d02436eabeddd0663eaf6d47dc55a 581 PRINTS PR01165 Cytochrome c oxidase subunit I signature 361 379 1.3E-95 T 22-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 SRM_RS11915 8c6d02436eabeddd0663eaf6d47dc55a 581 PRINTS PR01165 Cytochrome c oxidase subunit I signature 389 408 1.3E-95 T 22-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 SRM_RS11915 8c6d02436eabeddd0663eaf6d47dc55a 581 PRINTS PR01165 Cytochrome c oxidase subunit I signature 106 130 1.3E-95 T 22-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 SRM_RS11915 8c6d02436eabeddd0663eaf6d47dc55a 581 PRINTS PR01165 Cytochrome c oxidase subunit I signature 326 347 1.3E-95 T 22-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 SRM_RS02050 77cc2dc7a3ef999ab68c12826d37ab8b 133 Gene3D G3DSA:3.40.50.1010 4 130 9.1E-6 T 22-04-2016 IPR029060 PIN domain-like SRM_RS02050 77cc2dc7a3ef999ab68c12826d37ab8b 133 SUPERFAMILY SSF88723 3 126 1.57E-18 T 22-04-2016 IPR029060 PIN domain-like SRM_RS02050 77cc2dc7a3ef999ab68c12826d37ab8b 133 Pfam PF01850 PIN domain 4 126 3.2E-11 T 22-04-2016 IPR002716 PIN domain SRM_RS04010 ee95c1276b4980808a107877269a1b2c 361 Gene3D G3DSA:3.40.50.2000 145 333 1.9E-15 T 22-04-2016 SRM_RS04010 ee95c1276b4980808a107877269a1b2c 361 PANTHER PTHR12526 118 358 1.4E-25 T 22-04-2016 SRM_RS04010 ee95c1276b4980808a107877269a1b2c 361 Pfam PF00534 Glycosyl transferases group 1 173 326 3.9E-18 T 22-04-2016 IPR001296 Glycosyl transferase, family 1 SRM_RS04010 ee95c1276b4980808a107877269a1b2c 361 SUPERFAMILY SSF53756 12 358 4.08E-39 T 22-04-2016 SRM_RS02235 c56704a6cc943657cb9d530974246c80 420 Pfam PF00953 Glycosyl transferase family 4 85 247 3.9E-34 T 22-04-2016 IPR000715 Glycosyl transferase, family 4 GO:0008963|GO:0016021 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 SRM_RS02235 c56704a6cc943657cb9d530974246c80 420 ProSitePatterns PS01348 MraY family signature 2. 168 179 - T 22-04-2016 IPR018480 Phospho-N-acetylmuramoyl-pentapeptide transferase, conserved site KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 SRM_RS02235 c56704a6cc943657cb9d530974246c80 420 PANTHER PTHR22926 17 352 1.4E-66 T 22-04-2016 IPR000715 Glycosyl transferase, family 4 GO:0008963|GO:0016021 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 SRM_RS02235 c56704a6cc943657cb9d530974246c80 420 PANTHER PTHR22926:SF3 17 352 1.4E-66 T 22-04-2016 SRM_RS01775 33e89fbdaabacd48b573af52273b41f3 98 Pfam PF03683 Uncharacterised protein family (UPF0175) 11 83 1.3E-21 T 22-04-2016 IPR005368 Uncharacterised protein family UPF0175 SRM_RS08395 84f0447d63a188480f3bba3b10bc8fca 307 PANTHER PTHR31480 20 305 3.2E-63 T 22-04-2016 SRM_RS08395 84f0447d63a188480f3bba3b10bc8fca 307 SUPERFAMILY SSF48576 14 295 1.7E-67 T 22-04-2016 IPR008949 Isoprenoid synthase domain SRM_RS08395 84f0447d63a188480f3bba3b10bc8fca 307 Gene3D G3DSA:1.10.600.10 12 289 2.8E-65 T 22-04-2016 IPR008949 Isoprenoid synthase domain SRM_RS08395 84f0447d63a188480f3bba3b10bc8fca 307 PANTHER PTHR31480:SF0 20 305 3.2E-63 T 22-04-2016 SRM_RS08395 84f0447d63a188480f3bba3b10bc8fca 307 ProSitePatterns PS01045 Squalene and phytoene synthases signature 2. 168 194 - T 22-04-2016 IPR019845 Squalene/phytoene synthase, conserved site GO:0016765 SRM_RS08395 84f0447d63a188480f3bba3b10bc8fca 307 Pfam PF00494 Squalene/phytoene synthase 21 282 5.9E-62 T 22-04-2016 IPR002060 Squalene/phytoene synthase GO:0009058|GO:0016740 SRM_RS15640 9954eae0959f9a2cd05449007bbc5cb9 601 Pfam PF00664 ABC transporter transmembrane region 39 300 9.3E-62 T 22-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 SRM_RS15640 9954eae0959f9a2cd05449007bbc5cb9 601 PANTHER PTHR24221 14 597 2.0E-267 T 22-04-2016 SRM_RS15640 9954eae0959f9a2cd05449007bbc5cb9 601 Gene3D G3DSA:3.40.50.300 353 582 1.6E-86 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SRM_RS15640 9954eae0959f9a2cd05449007bbc5cb9 601 SMART SM00382 378 564 1.4E-17 T 22-04-2016 IPR003593 AAA+ ATPase domain SRM_RS15640 9954eae0959f9a2cd05449007bbc5cb9 601 Gene3D G3DSA:1.20.1560.10 23 341 5.8E-88 T 22-04-2016 SRM_RS15640 9954eae0959f9a2cd05449007bbc5cb9 601 ProSitePatterns PS00211 ABC transporters family signature. 490 504 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 SRM_RS15640 9954eae0959f9a2cd05449007bbc5cb9 601 Pfam PF00005 ABC transporter 369 518 1.5E-36 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 SRM_RS15640 9954eae0959f9a2cd05449007bbc5cb9 601 SUPERFAMILY SSF52540 342 589 1.02E-94 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SRM_RS15640 9954eae0959f9a2cd05449007bbc5cb9 601 SUPERFAMILY SSF90123 23 341 1.09E-85 T 22-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 SRM_RS14955 94e8cc04bc3f6d5c38332881a30aa1dc 198 Pfam PF14343 PrcB C-terminal 117 174 2.6E-15 T 22-04-2016 IPR025748 PrcB C-terminal domain SRM_RS15240 6e124f1f080954704f74bc6efa56b45a 397 Gene3D G3DSA:2.60.40.10 325 380 4.2E-4 T 22-04-2016 IPR013783 Immunoglobulin-like fold SRM_RS15240 6e124f1f080954704f74bc6efa56b45a 397 SUPERFAMILY SSF81296 312 396 1.82E-10 T 22-04-2016 IPR014756 Immunoglobulin E-set SRM_RS02930 97707cc8b602b6991751b2999f75987a 567 Pfam PF00795 Carbon-nitrogen hydrolase 3 154 1.7E-12 T 22-04-2016 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 SRM_RS02930 97707cc8b602b6991751b2999f75987a 567 Pfam PF02540 NAD synthase 277 527 6.4E-73 T 22-04-2016 IPR022310 NAD/GMP synthase SRM_RS02930 97707cc8b602b6991751b2999f75987a 567 SUPERFAMILY SSF52402 271 535 2.87E-71 T 22-04-2016 SRM_RS02930 97707cc8b602b6991751b2999f75987a 567 Gene3D G3DSA:3.60.110.10 1 271 1.7E-51 T 22-04-2016 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 SRM_RS02930 97707cc8b602b6991751b2999f75987a 567 PANTHER PTHR23090 1 546 1.5E-128 T 22-04-2016 SRM_RS02930 97707cc8b602b6991751b2999f75987a 567 TIGRFAM TIGR00552 nadE: NAD+ synthetase 282 531 5.8E-62 T 22-04-2016 IPR003694 NAD(+) synthetase GO:0003952|GO:0005524|GO:0009435 KEGG: 00760+6.3.1.5|UniPathway: UPA00253 SRM_RS02930 97707cc8b602b6991751b2999f75987a 567 Gene3D G3DSA:3.40.50.620 272 535 3.8E-74 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold SRM_RS02930 97707cc8b602b6991751b2999f75987a 567 SUPERFAMILY SSF56317 1 257 2.75E-50 T 22-04-2016 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 SRM_RS14965 0a572e0493cf8a39fd262afd5f778f94 321 Pfam PF16363 GDP-mannose 4,6 dehydratase 5 304 1.8E-54 T 22-04-2016 IPR016040 NAD(P)-binding domain SRM_RS14965 0a572e0493cf8a39fd262afd5f778f94 321 PRINTS PR01713 Nucleotide sugar epimerase signature 214 229 9.0E-5 T 22-04-2016 IPR008089 Nucleotide sugar epimerase GO:0005975|GO:0016857 SRM_RS14965 0a572e0493cf8a39fd262afd5f778f94 321 PRINTS PR01713 Nucleotide sugar epimerase signature 235 250 9.0E-5 T 22-04-2016 IPR008089 Nucleotide sugar epimerase GO:0005975|GO:0016857 SRM_RS14965 0a572e0493cf8a39fd262afd5f778f94 321 PRINTS PR01713 Nucleotide sugar epimerase signature 274 291 9.0E-5 T 22-04-2016 IPR008089 Nucleotide sugar epimerase GO:0005975|GO:0016857 SRM_RS14965 0a572e0493cf8a39fd262afd5f778f94 321 Gene3D G3DSA:3.40.50.720 3 173 1.1E-52 T 22-04-2016 IPR016040 NAD(P)-binding domain SRM_RS14965 0a572e0493cf8a39fd262afd5f778f94 321 Gene3D G3DSA:3.90.25.10 174 313 1.5E-55 T 22-04-2016 SRM_RS14965 0a572e0493cf8a39fd262afd5f778f94 321 SUPERFAMILY SSF51735 1 311 3.05E-88 T 22-04-2016 IPR016040 NAD(P)-binding domain SRM_RS14965 0a572e0493cf8a39fd262afd5f778f94 321 PANTHER PTHR10366 3 313 5.1E-131 T 22-04-2016 SRM_RS14965 0a572e0493cf8a39fd262afd5f778f94 321 PANTHER PTHR10366:SF399 3 313 5.1E-131 T 22-04-2016 SRM_RS05975 985c0509b6ab4b707823299ab151e1fe 415 PANTHER PTHR31412:SF6 361 414 7.7E-43 T 22-04-2016 SRM_RS05975 985c0509b6ab4b707823299ab151e1fe 415 PANTHER PTHR31412:SF6 33 296 7.7E-43 T 22-04-2016 SRM_RS05975 985c0509b6ab4b707823299ab151e1fe 415 PANTHER PTHR31412 361 414 7.7E-43 T 22-04-2016 SRM_RS05975 985c0509b6ab4b707823299ab151e1fe 415 PANTHER PTHR31412 33 296 7.7E-43 T 22-04-2016 SRM_RS09250 89b3d19c772f58061bb2f580ac010f6f 385 Gene3D G3DSA:3.30.9.10 156 313 3.7E-12 T 22-04-2016 SRM_RS09250 89b3d19c772f58061bb2f580ac010f6f 385 Pfam PF01494 FAD binding domain 4 306 1.2E-15 T 22-04-2016 IPR002938 FAD-binding domain GO:0071949 SRM_RS09250 89b3d19c772f58061bb2f580ac010f6f 385 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 142 157 3.2E-8 T 22-04-2016 SRM_RS09250 89b3d19c772f58061bb2f580ac010f6f 385 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 271 286 3.2E-8 T 22-04-2016 SRM_RS09250 89b3d19c772f58061bb2f580ac010f6f 385 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 4 26 3.2E-8 T 22-04-2016 SRM_RS09250 89b3d19c772f58061bb2f580ac010f6f 385 PANTHER PTHR10617:SF101 1 347 2.5E-22 T 22-04-2016 SRM_RS09250 89b3d19c772f58061bb2f580ac010f6f 385 PANTHER PTHR10617 1 347 2.5E-22 T 22-04-2016 SRM_RS09250 89b3d19c772f58061bb2f580ac010f6f 385 Gene3D G3DSA:3.50.50.60 3 155 1.5E-16 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SRM_RS09250 89b3d19c772f58061bb2f580ac010f6f 385 SUPERFAMILY SSF51905 2 163 3.53E-39 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SRM_RS09250 89b3d19c772f58061bb2f580ac010f6f 385 SUPERFAMILY SSF51905 258 358 3.53E-39 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SRM_RS12125 6c0ec4aa14e9a8404bb7d8336589d8d4 184 SUPERFAMILY SSF88659 109 173 5.23E-11 T 22-04-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 SRM_RS12125 6c0ec4aa14e9a8404bb7d8336589d8d4 184 PANTHER PTHR30173 1 172 4.4E-23 T 22-04-2016 SRM_RS12125 6c0ec4aa14e9a8404bb7d8336589d8d4 184 SUPERFAMILY SSF88946 8 108 3.73E-16 T 22-04-2016 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 SRM_RS12125 6c0ec4aa14e9a8404bb7d8336589d8d4 184 Gene3D G3DSA:1.10.1740.10 10 112 1.6E-17 T 22-04-2016 SRM_RS12125 6c0ec4aa14e9a8404bb7d8336589d8d4 184 Pfam PF08281 Sigma-70, region 4 118 167 1.3E-9 T 22-04-2016 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 SRM_RS12125 6c0ec4aa14e9a8404bb7d8336589d8d4 184 Gene3D G3DSA:1.10.10.10 113 172 1.5E-12 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SRM_RS12125 6c0ec4aa14e9a8404bb7d8336589d8d4 184 Pfam PF04542 Sigma-70 region 2 25 90 4.7E-8 T 22-04-2016 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 SRM_RS12125 6c0ec4aa14e9a8404bb7d8336589d8d4 184 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 21 172 1.6E-21 T 22-04-2016 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 SRM_RS13915 7fec8abf6528e4ad675907b33b483e39 428 SMART SM00646 259 414 2.0E-37 T 22-04-2016 IPR002508 Cell wall hydrolase/autolysin, catalytic GO:0008745|GO:0009253 SRM_RS13915 7fec8abf6528e4ad675907b33b483e39 428 PANTHER PTHR30404 186 419 2.8E-67 T 22-04-2016 SRM_RS13915 7fec8abf6528e4ad675907b33b483e39 428 PANTHER PTHR30404:SF0 186 419 2.8E-67 T 22-04-2016 SRM_RS13915 7fec8abf6528e4ad675907b33b483e39 428 SUPERFAMILY SSF53187 341 416 1.41E-53 T 22-04-2016 SRM_RS13915 7fec8abf6528e4ad675907b33b483e39 428 SUPERFAMILY SSF53187 199 293 1.41E-53 T 22-04-2016 SRM_RS13915 7fec8abf6528e4ad675907b33b483e39 428 Gene3D G3DSA:3.40.630.40 199 294 1.5E-59 T 22-04-2016 IPR002508 Cell wall hydrolase/autolysin, catalytic GO:0008745|GO:0009253 SRM_RS13915 7fec8abf6528e4ad675907b33b483e39 428 Gene3D G3DSA:3.40.630.40 342 418 1.5E-59 T 22-04-2016 IPR002508 Cell wall hydrolase/autolysin, catalytic GO:0008745|GO:0009253 SRM_RS13915 7fec8abf6528e4ad675907b33b483e39 428 Pfam PF01520 N-acetylmuramoyl-L-alanine amidase 200 414 3.9E-49 T 22-04-2016 IPR002508 Cell wall hydrolase/autolysin, catalytic GO:0008745|GO:0009253 SRM_RS08875 d403e7cd50efa05992564cea0203523b 259 PANTHER PTHR17985:SF8 2 256 5.4E-80 T 22-04-2016 SRM_RS08875 d403e7cd50efa05992564cea0203523b 259 PANTHER PTHR17985 2 256 5.4E-80 T 22-04-2016 IPR008551 Transport and Golgi organisation protein 2 SRM_RS08875 d403e7cd50efa05992564cea0203523b 259 Pfam PF05742 Transport and Golgi organisation 2 1 238 7.7E-71 T 22-04-2016 IPR008551 Transport and Golgi organisation protein 2 SRM_RS12180 e257759565fce7073d35eeda918b73c4 160 Gene3D G3DSA:1.20.1440.60 23 99 3.2E-14 T 22-04-2016 IPR012657 23S rRNA-intervening sequence protein SRM_RS12180 e257759565fce7073d35eeda918b73c4 160 SUPERFAMILY SSF158446 21 128 1.11E-19 T 22-04-2016 SRM_RS12180 e257759565fce7073d35eeda918b73c4 160 TIGRFAM TIGR02436 TIGR02436: four helix bundle protein 33 126 3.6E-19 T 22-04-2016 IPR012657 23S rRNA-intervening sequence protein SRM_RS12180 e257759565fce7073d35eeda918b73c4 160 Pfam PF05635 23S rRNA-intervening sequence protein 34 98 9.3E-14 T 22-04-2016 IPR012657 23S rRNA-intervening sequence protein SRM_RS11315 b315be778940ebc150197b089c743a5a 209 PANTHER PTHR10108:SF838 11 169 5.6E-36 T 22-04-2016 SRM_RS11315 b315be778940ebc150197b089c743a5a 209 Pfam PF13649 Methyltransferase domain 44 135 6.5E-15 T 22-04-2016 SRM_RS11315 b315be778940ebc150197b089c743a5a 209 PANTHER PTHR10108 11 169 5.6E-36 T 22-04-2016 SRM_RS11315 b315be778940ebc150197b089c743a5a 209 Gene3D G3DSA:3.40.50.150 9 198 2.8E-30 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SRM_RS11315 b315be778940ebc150197b089c743a5a 209 SUPERFAMILY SSF53335 4 195 3.73E-31 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SRM_RS14495 80bbd97677eda4c19c6e8739d1434a0d 260 Pfam PF13861 FlgD Tudor-like domain 127 254 3.1E-6 T 22-04-2016 IPR025963 FlgD Tudor-like domain SRM_RS14495 80bbd97677eda4c19c6e8739d1434a0d 260 PANTHER PTHR30435:SF15 54 235 3.0E-31 T 22-04-2016 SRM_RS14495 80bbd97677eda4c19c6e8739d1434a0d 260 Pfam PF03963 Flagellar hook capping protein - N-terminal region 50 108 1.0E-20 T 22-04-2016 IPR005648 Flagellar hook capping protein SRM_RS14495 80bbd97677eda4c19c6e8739d1434a0d 260 Pfam PF13860 FlgD Ig-like domain 139 215 1.4E-20 T 22-04-2016 IPR025965 FlgD Ig-like domain SRM_RS14495 80bbd97677eda4c19c6e8739d1434a0d 260 PANTHER PTHR30435 54 235 3.0E-31 T 22-04-2016 SRM_RS14290 a01e5ff6f82576e9fff13d91b88e1cbb 358 SMART SM00327 88 276 1.4E-13 T 22-04-2016 IPR002035 von Willebrand factor, type A SRM_RS14290 a01e5ff6f82576e9fff13d91b88e1cbb 358 PANTHER PTHR22550 1 182 1.6E-42 T 22-04-2016 SRM_RS14290 a01e5ff6f82576e9fff13d91b88e1cbb 358 PANTHER PTHR22550 199 335 1.6E-42 T 22-04-2016 SRM_RS14290 a01e5ff6f82576e9fff13d91b88e1cbb 358 SUPERFAMILY SSF53300 85 238 2.82E-22 T 22-04-2016 IPR002035 von Willebrand factor, type A SRM_RS14290 a01e5ff6f82576e9fff13d91b88e1cbb 358 PANTHER PTHR22550:SF8 1 182 1.6E-42 T 22-04-2016 SRM_RS14290 a01e5ff6f82576e9fff13d91b88e1cbb 358 PANTHER PTHR22550:SF8 199 335 1.6E-42 T 22-04-2016 SRM_RS14290 a01e5ff6f82576e9fff13d91b88e1cbb 358 Pfam PF13519 von Willebrand factor type A domain 91 210 4.8E-17 T 22-04-2016 IPR002035 von Willebrand factor, type A SRM_RS14290 a01e5ff6f82576e9fff13d91b88e1cbb 358 Gene3D G3DSA:3.40.50.410 85 239 8.0E-15 T 22-04-2016 IPR002035 von Willebrand factor, type A SRM_RS08595 4b0e05c19954251cffc4131614822822 371 Pfam PF00005 ABC transporter 18 162 2.4E-25 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 SRM_RS08595 4b0e05c19954251cffc4131614822822 371 Gene3D G3DSA:3.40.50.300 3 227 1.6E-58 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SRM_RS08595 4b0e05c19954251cffc4131614822822 371 SMART SM00382 27 211 6.5E-7 T 22-04-2016 IPR003593 AAA+ ATPase domain SRM_RS08595 4b0e05c19954251cffc4131614822822 371 PANTHER PTHR24220:SF282 4 244 7.9E-83 T 22-04-2016 SRM_RS08595 4b0e05c19954251cffc4131614822822 371 SUPERFAMILY SSF52540 3 244 1.27E-63 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SRM_RS08595 4b0e05c19954251cffc4131614822822 371 PANTHER PTHR24220 4 244 7.9E-83 T 22-04-2016 SRM_RS08595 4b0e05c19954251cffc4131614822822 371 Gene3D G3DSA:2.40.50.140 285 346 7.5E-7 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold SRM_RS08595 4b0e05c19954251cffc4131614822822 371 SUPERFAMILY SSF50331 238 361 2.02E-19 T 22-04-2016 IPR008995 Molybdate/tungstate binding, C-terminal SRM_RS12280 0a6226edd8f6fe0f0dbcd25509e7e89c 307 PANTHER PTHR11138 1 307 1.2E-97 T 22-04-2016 SRM_RS12280 0a6226edd8f6fe0f0dbcd25509e7e89c 307 SUPERFAMILY SSF50486 204 305 8.63E-30 T 22-04-2016 IPR011034 Formyl transferase, C-terminal-like GO:0003824 SRM_RS12280 0a6226edd8f6fe0f0dbcd25509e7e89c 307 Pfam PF02911 Formyl transferase, C-terminal domain 203 297 5.5E-27 T 22-04-2016 IPR005793 Formyl transferase, C-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 SRM_RS12280 0a6226edd8f6fe0f0dbcd25509e7e89c 307 TIGRFAM TIGR00460 fmt: methionyl-tRNA formyltransferase 1 299 5.9E-75 T 22-04-2016 IPR005794 Methionyl-tRNA formyltransferase GO:0004479|GO:0071951 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 SRM_RS12280 0a6226edd8f6fe0f0dbcd25509e7e89c 307 Gene3D G3DSA:3.40.50.170 1 204 2.6E-64 T 22-04-2016 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 SRM_RS12280 0a6226edd8f6fe0f0dbcd25509e7e89c 307 Hamap MF_00182 Methionyl-tRNA formyltransferase [fmt]. 1 300 34.077 T 22-04-2016 IPR005794 Methionyl-tRNA formyltransferase GO:0004479|GO:0071951 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 SRM_RS12280 0a6226edd8f6fe0f0dbcd25509e7e89c 307 SUPERFAMILY SSF53328 1 205 9.16E-58 T 22-04-2016 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 SRM_RS12280 0a6226edd8f6fe0f0dbcd25509e7e89c 307 Pfam PF00551 Formyl transferase 1 180 4.3E-36 T 22-04-2016 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 SRM_RS12280 0a6226edd8f6fe0f0dbcd25509e7e89c 307 Gene3D G3DSA:3.10.25.10 207 306 1.2E-31 T 22-04-2016 IPR005793 Formyl transferase, C-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 SRM_RS07035 fdb352fec6b62f9c2a41ba7adf642e6b 170 Pfam PF01967 MoaC family 18 153 4.1E-49 T 22-04-2016 IPR002820 Molybdopterin cofactor biosynthesis C (MoaC) domain GO:0006777 UniPathway: UPA00344 SRM_RS07035 fdb352fec6b62f9c2a41ba7adf642e6b 170 PANTHER PTHR22960 7 161 1.2E-79 T 22-04-2016 SRM_RS07035 fdb352fec6b62f9c2a41ba7adf642e6b 170 Hamap MF_01224_B Cyclic pyranopterin monophosphate synthase accessory protein [moaC]. 5 161 32.183 T 22-04-2016 IPR023046 Molybdenum cofactor biosynthesis C, bacterial-type UniPathway: UPA00344 SRM_RS07035 fdb352fec6b62f9c2a41ba7adf642e6b 170 Gene3D G3DSA:3.30.70.640 6 161 5.5E-60 T 22-04-2016 IPR002820 Molybdopterin cofactor biosynthesis C (MoaC) domain GO:0006777 UniPathway: UPA00344 SRM_RS07035 fdb352fec6b62f9c2a41ba7adf642e6b 170 TIGRFAM TIGR00581 moaC: molybdenum cofactor biosynthesis protein C 7 155 3.3E-54 T 22-04-2016 IPR023045 Molybdenum cofactor biosynthesis C GO:0006777 UniPathway: UPA00344 SRM_RS07035 fdb352fec6b62f9c2a41ba7adf642e6b 170 SUPERFAMILY SSF55040 14 158 1.96E-54 T 22-04-2016 IPR002820 Molybdopterin cofactor biosynthesis C (MoaC) domain GO:0006777 UniPathway: UPA00344 SRM_RS15195 3e3a2c0c15f2967b74606a015794c14c 211 PANTHER PTHR36573 5 211 1.1E-13 T 22-04-2016 SRM_RS15195 3e3a2c0c15f2967b74606a015794c14c 211 Gene3D G3DSA:3.10.450.50 119 171 3.7E-9 T 22-04-2016 IPR032710 NTF2-like domain SRM_RS15195 3e3a2c0c15f2967b74606a015794c14c 211 Gene3D G3DSA:3.10.450.50 39 76 3.7E-9 T 22-04-2016 IPR032710 NTF2-like domain SRM_RS15195 3e3a2c0c15f2967b74606a015794c14c 211 Pfam PF05494 MlaC protein 50 198 5.6E-31 T 22-04-2016 IPR008869 Toluene tolerance Ttg2/phospholipid-binding protein MlaC SRM_RS15195 3e3a2c0c15f2967b74606a015794c14c 211 Gene3D G3DSA:1.10.10.640 77 117 2.1E-12 T 22-04-2016 IPR023094 Toluene tolerance protein, alpha-helical SRM_RS15195 3e3a2c0c15f2967b74606a015794c14c 211 Gene3D G3DSA:1.10.10.640 172 205 2.1E-12 T 22-04-2016 IPR023094 Toluene tolerance protein, alpha-helical SRM_RS02640 4fa5b5a25bd3d77aacc60aa21d8892b0 259 PIRSF PIRSF000851 11 259 9.0E-77 T 22-04-2016 IPR026027 Phosphatidylcholine synthase Pcs KEGG: 00564+2.7.8.24|MetaCyc: PWY-6826 SRM_RS06305 a497d0389c537a04d814f34d2637a3e3 320 Pfam PF13469 Sulfotransferase family 7 221 2.1E-42 T 22-04-2016 SRM_RS06305 a497d0389c537a04d814f34d2637a3e3 320 PANTHER PTHR10704:SF43 134 304 1.3E-16 T 22-04-2016 SRM_RS06305 a497d0389c537a04d814f34d2637a3e3 320 PANTHER PTHR10704 134 304 1.3E-16 T 22-04-2016 SRM_RS06305 a497d0389c537a04d814f34d2637a3e3 320 Gene3D G3DSA:3.40.50.300 117 284 4.7E-19 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SRM_RS06305 a497d0389c537a04d814f34d2637a3e3 320 Gene3D G3DSA:3.40.50.300 3 66 4.7E-19 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SRM_RS06305 a497d0389c537a04d814f34d2637a3e3 320 SUPERFAMILY SSF52540 3 60 3.64E-37 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SRM_RS06305 a497d0389c537a04d814f34d2637a3e3 320 SUPERFAMILY SSF52540 107 283 3.64E-37 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SRM_RS03005 965ed0641ce98d79ed838ba458bc9834 419 SUPERFAMILY SSF56935 56 390 3.48E-5 T 22-04-2016 SRM_RS03005 965ed0641ce98d79ed838ba458bc9834 419 Pfam PF07396 Phosphate-selective porin O and P 59 389 1.8E-9 T 22-04-2016 IPR010870 Phosphate-selective porin O/P SRM_RS03005 965ed0641ce98d79ed838ba458bc9834 419 Gene3D G3DSA:2.40.160.10 39 419 1.9E-73 T 22-04-2016 IPR023614 Porin domain SRM_RS08095 f07a99f052097800904093158c350c4c 382 PANTHER PTHR11808 4 381 2.3E-145 T 22-04-2016 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 SRM_RS08095 f07a99f052097800904093158c350c4c 382 PIRSF PIRSF001434 1 379 1.3E-121 T 22-04-2016 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 SRM_RS08095 f07a99f052097800904093158c350c4c 382 ProSitePatterns PS00868 Cys/Met metabolism enzymes pyridoxal-phosphate attachment site. 188 202 - T 22-04-2016 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 SRM_RS08095 f07a99f052097800904093158c350c4c 382 SUPERFAMILY SSF53383 6 377 2.13E-95 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase SRM_RS08095 f07a99f052097800904093158c350c4c 382 Gene3D G3DSA:3.90.1150.10 245 378 3.0E-39 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 SRM_RS08095 f07a99f052097800904093158c350c4c 382 Gene3D G3DSA:3.40.640.10 4 244 8.0E-77 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 SRM_RS08095 f07a99f052097800904093158c350c4c 382 Pfam PF01053 Cys/Met metabolism PLP-dependent enzyme 5 376 3.9E-113 T 22-04-2016 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 SRM_RS11060 42b4b0d2a4fe9726edc03f8e3b434c80 191 Gene3D G3DSA:1.10.10.10 122 185 2.7E-20 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SRM_RS11060 42b4b0d2a4fe9726edc03f8e3b434c80 191 Pfam PF04542 Sigma-70 region 2 28 95 8.4E-15 T 22-04-2016 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 SRM_RS11060 42b4b0d2a4fe9726edc03f8e3b434c80 191 Gene3D G3DSA:1.10.1740.10 14 113 3.9E-26 T 22-04-2016 SRM_RS11060 42b4b0d2a4fe9726edc03f8e3b434c80 191 PANTHER PTHR30173 14 185 6.7E-41 T 22-04-2016 SRM_RS11060 42b4b0d2a4fe9726edc03f8e3b434c80 191 SUPERFAMILY SSF88659 120 185 6.35E-16 T 22-04-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 SRM_RS11060 42b4b0d2a4fe9726edc03f8e3b434c80 191 SUPERFAMILY SSF88946 14 110 5.49E-23 T 22-04-2016 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 SRM_RS11060 42b4b0d2a4fe9726edc03f8e3b434c80 191 Pfam PF08281 Sigma-70, region 4 129 181 5.4E-17 T 22-04-2016 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 SRM_RS11060 42b4b0d2a4fe9726edc03f8e3b434c80 191 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 23 185 1.2E-29 T 22-04-2016 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 SRM_RS03980 1628c1bb513b985ccbfa37f0957cceeb 349 Gene3D G3DSA:3.10.580.10 2 113 9.3E-28 T 22-04-2016 SRM_RS03980 1628c1bb513b985ccbfa37f0957cceeb 349 PANTHER PTHR22572:SF114 121 348 7.3E-111 T 22-04-2016 SRM_RS03980 1628c1bb513b985ccbfa37f0957cceeb 349 SMART SM00116 69 119 0.015 T 22-04-2016 IPR000644 CBS domain SRM_RS03980 1628c1bb513b985ccbfa37f0957cceeb 349 SMART SM00116 5 53 0.031 T 22-04-2016 IPR000644 CBS domain SRM_RS03980 1628c1bb513b985ccbfa37f0957cceeb 349 PANTHER PTHR22572 121 348 7.3E-111 T 22-04-2016 SRM_RS03980 1628c1bb513b985ccbfa37f0957cceeb 349 Gene3D G3DSA:3.90.550.10 122 345 1.3E-65 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases SRM_RS03980 1628c1bb513b985ccbfa37f0957cceeb 349 Pfam PF00483 Nucleotidyl transferase 123 345 8.7E-39 T 22-04-2016 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 Reactome: REACT_17015 SRM_RS03980 1628c1bb513b985ccbfa37f0957cceeb 349 Pfam PF00571 CBS domain 62 106 9.4E-8 T 22-04-2016 IPR000644 CBS domain SRM_RS03980 1628c1bb513b985ccbfa37f0957cceeb 349 Pfam PF00571 CBS domain 7 53 9.2E-7 T 22-04-2016 IPR000644 CBS domain SRM_RS03980 1628c1bb513b985ccbfa37f0957cceeb 349 SUPERFAMILY SSF54631 5 55 1.17E-7 T 22-04-2016 SRM_RS03980 1628c1bb513b985ccbfa37f0957cceeb 349 SUPERFAMILY SSF53448 47 346 1.96E-68 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases SRM_RS04620 d5b5412d0e5d146c27f81a3ee5eb99ac 304 SUPERFAMILY SSF49265 155 245 2.54E-6 T 22-04-2016 IPR003961 Fibronectin type III GO:0005515 SRM_RS04620 d5b5412d0e5d146c27f81a3ee5eb99ac 304 Gene3D G3DSA:2.60.40.10 153 245 1.4E-4 T 22-04-2016 IPR013783 Immunoglobulin-like fold SRM_RS06070 e9278fa8125d0dbedeb1d4db054b5446 304 PRINTS PR01374 Gram-negative bacterial tonB protein signature 146 156 7.0E-5 T 22-04-2016 IPR003538 Gram-negative bacterial TonB protein GO:0015343|GO:0015891|GO:0030288|GO:0031992 SRM_RS06070 e9278fa8125d0dbedeb1d4db054b5446 304 PRINTS PR01374 Gram-negative bacterial tonB protein signature 207 228 7.0E-5 T 22-04-2016 IPR003538 Gram-negative bacterial TonB protein GO:0015343|GO:0015891|GO:0030288|GO:0031992 SRM_RS06070 e9278fa8125d0dbedeb1d4db054b5446 304 PRINTS PR01374 Gram-negative bacterial tonB protein signature 228 246 7.0E-5 T 22-04-2016 IPR003538 Gram-negative bacterial TonB protein GO:0015343|GO:0015891|GO:0030288|GO:0031992 SRM_RS06070 e9278fa8125d0dbedeb1d4db054b5446 304 Pfam PF03544 Gram-negative bacterial TonB protein C-terminal 212 247 9.7E-6 T 22-04-2016 IPR006260 TonB, C-terminal GO:0006810 SRM_RS06070 e9278fa8125d0dbedeb1d4db054b5446 304 Pfam PF03544 Gram-negative bacterial TonB protein C-terminal 265 300 1.2E-5 T 22-04-2016 IPR006260 TonB, C-terminal GO:0006810 SRM_RS06070 e9278fa8125d0dbedeb1d4db054b5446 304 Gene3D G3DSA:3.30.1150.10 196 300 9.0E-7 T 22-04-2016 SRM_RS06070 e9278fa8125d0dbedeb1d4db054b5446 304 SUPERFAMILY SSF74653 206 300 9.03E-15 T 22-04-2016 SRM_RS11475 3cc6dc575ecfacc19ab2a237b2316797 1012 Gene3D G3DSA:2.130.10.10 483 614 1.7E-26 T 22-04-2016 IPR015943 WD40/YVTN repeat-like-containing domain GO:0005515 SRM_RS11475 3cc6dc575ecfacc19ab2a237b2316797 1012 Gene3D G3DSA:2.130.10.10 338 447 1.7E-26 T 22-04-2016 IPR015943 WD40/YVTN repeat-like-containing domain GO:0005515 SRM_RS11475 3cc6dc575ecfacc19ab2a237b2316797 1012 SUPERFAMILY SSF82171 334 591 3.73E-24 T 22-04-2016 SRM_RS07730 a50b18c74fb1760b537e895127ab9358 680 Pfam PF00593 TonB dependent receptor 432 678 2.3E-26 T 22-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 SRM_RS07730 a50b18c74fb1760b537e895127ab9358 680 PANTHER PTHR32552:SF13 4 680 9.0E-54 T 22-04-2016 SRM_RS07730 a50b18c74fb1760b537e895127ab9358 680 SUPERFAMILY SSF56935 30 680 3.4E-82 T 22-04-2016 SRM_RS07730 a50b18c74fb1760b537e895127ab9358 680 Pfam PF07715 TonB-dependent Receptor Plug Domain 55 164 5.3E-13 T 22-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 SRM_RS07730 a50b18c74fb1760b537e895127ab9358 680 Gene3D G3DSA:2.40.170.20 173 680 2.9E-63 T 22-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 SRM_RS07730 a50b18c74fb1760b537e895127ab9358 680 Gene3D G3DSA:2.170.130.10 39 164 5.4E-18 T 22-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 SRM_RS07730 a50b18c74fb1760b537e895127ab9358 680 PANTHER PTHR32552 4 680 9.0E-54 T 22-04-2016 SRM_RS04640 7ff843e57ee2858217c08edeca8172c8 221 Pfam PF01694 Rhomboid family 68 209 4.6E-35 T 22-04-2016 IPR022764 Peptidase S54, rhomboid domain GO:0004252|GO:0016021 SRM_RS04640 7ff843e57ee2858217c08edeca8172c8 221 Gene3D G3DSA:1.20.1540.10 17 208 4.7E-42 T 22-04-2016 IPR022764 Peptidase S54, rhomboid domain GO:0004252|GO:0016021 SRM_RS04640 7ff843e57ee2858217c08edeca8172c8 221 SUPERFAMILY SSF144091 16 211 1.31E-43 T 22-04-2016 SRM_RS04640 7ff843e57ee2858217c08edeca8172c8 221 PANTHER PTHR22936 3 203 4.2E-34 T 22-04-2016 IPR002610 Peptidase S54, rhomboid GO:0004252|GO:0006508|GO:0016021 SRM_RS05515 7e34f57c00592e6ae3937fce293d6e39 133 SUPERFAMILY SSF52172 11 130 2.56E-30 T 22-04-2016 IPR011006 CheY-like superfamily SRM_RS05515 7e34f57c00592e6ae3937fce293d6e39 133 PANTHER PTHR24423 4 130 3.4E-29 T 22-04-2016 SRM_RS05515 7e34f57c00592e6ae3937fce293d6e39 133 Gene3D G3DSA:3.40.50.2300 10 130 1.3E-32 T 22-04-2016 SRM_RS05515 7e34f57c00592e6ae3937fce293d6e39 133 Pfam PF00072 Response regulator receiver domain 15 126 4.0E-20 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SRM_RS05515 7e34f57c00592e6ae3937fce293d6e39 133 SMART SM00448 13 126 4.1E-27 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SRM_RS02445 3e678f73bd626f0a437245ffd44d7e88 548 PANTHER PTHR15239 1 386 1.4E-52 T 22-04-2016 SRM_RS02445 3e678f73bd626f0a437245ffd44d7e88 548 PANTHER PTHR15239 404 544 1.4E-52 T 22-04-2016 SRM_RS02445 3e678f73bd626f0a437245ffd44d7e88 548 Pfam PF05833 Fibronectin-binding protein A N-terminus (FbpA) 5 413 2.1E-42 T 22-04-2016 SRM_RS02445 3e678f73bd626f0a437245ffd44d7e88 548 PANTHER PTHR15239:SF1 404 544 1.4E-52 T 22-04-2016 SRM_RS02445 3e678f73bd626f0a437245ffd44d7e88 548 PANTHER PTHR15239:SF1 1 386 1.4E-52 T 22-04-2016 SRM_RS02445 3e678f73bd626f0a437245ffd44d7e88 548 Pfam PF05670 Domain of unknown function (DUF814) 438 522 5.0E-18 T 22-04-2016 IPR008532 Domain of unknown function DUF814 SRM_RS02445 3e678f73bd626f0a437245ffd44d7e88 548 Gene3D G3DSA:2.30.310.10 5 135 0.001 T 22-04-2016 SRM_RS08155 1496b87e4413f0e12f24580bba45af21 138 Pfam PF13669 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 21 98 7.1E-7 T 22-04-2016 SRM_RS08155 1496b87e4413f0e12f24580bba45af21 138 Gene3D G3DSA:3.10.180.10 19 135 4.9E-16 T 22-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase SRM_RS08155 1496b87e4413f0e12f24580bba45af21 138 SUPERFAMILY SSF54593 19 135 1.65E-18 T 22-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase SRM_RS09520 0ed77e9e0279dcdfbd3bb90557fff559 181 SUPERFAMILY SSF51161 5 165 3.88E-42 T 22-04-2016 IPR011004 Trimeric LpxA-like SRM_RS09520 0ed77e9e0279dcdfbd3bb90557fff559 181 PANTHER PTHR13061 12 167 3.9E-64 T 22-04-2016 SRM_RS09520 0ed77e9e0279dcdfbd3bb90557fff559 181 Gene3D G3DSA:2.160.10.10 5 164 2.3E-38 T 22-04-2016 SRM_RS09520 0ed77e9e0279dcdfbd3bb90557fff559 181 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 88 123 7.9E-7 T 22-04-2016 IPR001451 Hexapeptide repeat SRM_RS07345 04c278e24b4a99eb24f455e07d04cd87 212 TIGRFAM TIGR01065 hlyIII: channel protein, hemolysin III family 11 211 1.0E-56 T 22-04-2016 IPR005744 Hly-III GO:0016021|GO:0019835 SRM_RS07345 04c278e24b4a99eb24f455e07d04cd87 212 PANTHER PTHR20855:SF3 10 212 3.3E-55 T 22-04-2016 IPR005744 Hly-III GO:0016021|GO:0019835 SRM_RS07345 04c278e24b4a99eb24f455e07d04cd87 212 Pfam PF03006 Haemolysin-III related 8 204 5.2E-39 T 22-04-2016 IPR004254 AdipoR/Haemolysin-III-related GO:0016021 SRM_RS07345 04c278e24b4a99eb24f455e07d04cd87 212 PANTHER PTHR20855 10 212 3.3E-55 T 22-04-2016 IPR004254 AdipoR/Haemolysin-III-related GO:0016021 SRM_RS14090 5abaf189c4c75f59b6ffa44d054dd856 655 SUPERFAMILY SSF102588 451 650 3.27E-35 T 22-04-2016 IPR024078 Putative deacetylase LmbE-like domain SRM_RS14090 5abaf189c4c75f59b6ffa44d054dd856 655 SUPERFAMILY SSF102588 353 394 3.27E-35 T 22-04-2016 IPR024078 Putative deacetylase LmbE-like domain SRM_RS14090 5abaf189c4c75f59b6ffa44d054dd856 655 TIGRFAM TIGR00502 nagB: glucosamine-6-phosphate deaminase 31 272 1.2E-75 T 22-04-2016 IPR004547 Glucosamine-6-phosphate isomerase GO:0004342|GO:0006044 KEGG: 00520+3.5.99.6|MetaCyc: PWY-5514|MetaCyc: PWY-6855|MetaCyc: PWY-6906|UniPathway: UPA00629 SRM_RS14090 5abaf189c4c75f59b6ffa44d054dd856 655 Pfam PF02585 GlcNAc-PI de-N-acetylase 355 535 3.0E-18 T 22-04-2016 IPR003737 N-acetylglucosaminyl phosphatidylinositol deacetylase-related SRM_RS14090 5abaf189c4c75f59b6ffa44d054dd856 655 Gene3D G3DSA:3.40.50.1360 25 287 1.5E-99 T 22-04-2016 SRM_RS14090 5abaf189c4c75f59b6ffa44d054dd856 655 PANTHER PTHR11280 561 655 8.6E-272 T 22-04-2016 IPR004547 Glucosamine-6-phosphate isomerase GO:0004342|GO:0006044 KEGG: 00520+3.5.99.6|MetaCyc: PWY-5514|MetaCyc: PWY-6855|MetaCyc: PWY-6906|UniPathway: UPA00629 SRM_RS14090 5abaf189c4c75f59b6ffa44d054dd856 655 PANTHER PTHR11280 8 544 8.6E-272 T 22-04-2016 IPR004547 Glucosamine-6-phosphate isomerase GO:0004342|GO:0006044 KEGG: 00520+3.5.99.6|MetaCyc: PWY-5514|MetaCyc: PWY-6855|MetaCyc: PWY-6906|UniPathway: UPA00629 SRM_RS14090 5abaf189c4c75f59b6ffa44d054dd856 655 PANTHER PTHR11280:SF7 561 655 8.6E-272 T 22-04-2016 SRM_RS14090 5abaf189c4c75f59b6ffa44d054dd856 655 PANTHER PTHR11280:SF7 8 544 8.6E-272 T 22-04-2016 SRM_RS14090 5abaf189c4c75f59b6ffa44d054dd856 655 SUPERFAMILY SSF100950 26 282 6.8E-88 T 22-04-2016 SRM_RS14090 5abaf189c4c75f59b6ffa44d054dd856 655 Pfam PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase 31 253 9.7E-24 T 22-04-2016 IPR006148 Glucosamine/galactosamine-6-phosphate isomerase GO:0005975 KEGG: 00520+3.5.99.6|MetaCyc: PWY-5514|MetaCyc: PWY-6855|MetaCyc: PWY-6906 SRM_RS14090 5abaf189c4c75f59b6ffa44d054dd856 655 Gene3D G3DSA:3.40.50.10320 439 650 1.1E-50 T 22-04-2016 IPR024078 Putative deacetylase LmbE-like domain SRM_RS14090 5abaf189c4c75f59b6ffa44d054dd856 655 Gene3D G3DSA:3.40.50.10320 352 391 1.1E-50 T 22-04-2016 IPR024078 Putative deacetylase LmbE-like domain SRM_RS15775 cbfceeca03cd508bf48ce7d5ebd47805 345 Gene3D G3DSA:3.90.660.10 46 113 3.0E-23 T 22-04-2016 SRM_RS15775 cbfceeca03cd508bf48ce7d5ebd47805 345 Gene3D G3DSA:3.90.660.10 196 295 3.0E-23 T 22-04-2016 SRM_RS15775 cbfceeca03cd508bf48ce7d5ebd47805 345 Gene3D G3DSA:3.50.50.60 301 342 4.0E-34 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SRM_RS15775 cbfceeca03cd508bf48ce7d5ebd47805 345 Gene3D G3DSA:3.50.50.60 4 43 4.0E-34 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SRM_RS15775 cbfceeca03cd508bf48ce7d5ebd47805 345 Gene3D G3DSA:3.50.50.60 114 195 4.0E-34 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SRM_RS15775 cbfceeca03cd508bf48ce7d5ebd47805 345 Pfam PF01593 Flavin containing amine oxidoreductase 106 334 1.7E-6 T 22-04-2016 IPR002937 Amine oxidase GO:0016491|GO:0055114 SRM_RS15775 cbfceeca03cd508bf48ce7d5ebd47805 345 SUPERFAMILY SSF51905 302 340 1.17E-21 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SRM_RS15775 cbfceeca03cd508bf48ce7d5ebd47805 345 SUPERFAMILY SSF51905 4 205 1.17E-21 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SRM_RS15775 cbfceeca03cd508bf48ce7d5ebd47805 345 PANTHER PTHR16128:SF5 4 343 3.9E-52 T 22-04-2016 SRM_RS15775 cbfceeca03cd508bf48ce7d5ebd47805 345 Pfam PF13450 NAD(P)-binding Rossmann-like domain 8 72 8.1E-12 T 22-04-2016 SRM_RS15775 cbfceeca03cd508bf48ce7d5ebd47805 345 PANTHER PTHR16128 4 343 3.9E-52 T 22-04-2016 SRM_RS07870 5385eb3cff3300237cabc712e67e9a2f 237 Pfam PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region 84 182 1.4E-21 T 22-04-2016 IPR002125 Cytidine and deoxycytidylate deaminases, zinc-binding GO:0008270 SRM_RS07870 5385eb3cff3300237cabc712e67e9a2f 237 SUPERFAMILY SSF53927 77 231 3.9E-45 T 22-04-2016 IPR016193 Cytidine deaminase-like GO:0003824 SRM_RS07870 5385eb3cff3300237cabc712e67e9a2f 237 PANTHER PTHR11079 87 237 1.1E-42 T 22-04-2016 SRM_RS07870 5385eb3cff3300237cabc712e67e9a2f 237 Gene3D G3DSA:3.40.140.10 78 229 5.3E-48 T 22-04-2016 SRM_RS07870 5385eb3cff3300237cabc712e67e9a2f 237 PANTHER PTHR11079:SF25 87 237 1.1E-42 T 22-04-2016 SRM_RS03395 de39e03a9bf735e275cd9a2ae133ab42 239 Pfam PF12838 4Fe-4S dicluster domain 73 128 1.5E-10 T 22-04-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain SRM_RS03395 de39e03a9bf735e275cd9a2ae133ab42 239 PANTHER PTHR10849:SF13 20 166 2.6E-38 T 22-04-2016 SRM_RS03395 de39e03a9bf735e275cd9a2ae133ab42 239 SUPERFAMILY SSF54862 48 157 1.07E-22 T 22-04-2016 SRM_RS03395 de39e03a9bf735e275cd9a2ae133ab42 239 TIGRFAM TIGR01971 NuoI: NADH-quinone oxidoreductase, chain I 39 152 1.3E-34 T 22-04-2016 IPR010226 NADH-quinone oxidoreductase, chain I GO:0016020|GO:0016651|GO:0051539|GO:0055114 SRM_RS03395 de39e03a9bf735e275cd9a2ae133ab42 239 Hamap MF_01351 NAD(P)H-quinone oxidoreductase subunit I, chloroplastic [ndhI]. 21 161 24.498 T 22-04-2016 IPR010226 NADH-quinone oxidoreductase, chain I GO:0016020|GO:0016651|GO:0051539|GO:0055114 SRM_RS03395 de39e03a9bf735e275cd9a2ae133ab42 239 PANTHER PTHR10849 20 166 2.6E-38 T 22-04-2016 SRM_RS03395 de39e03a9bf735e275cd9a2ae133ab42 239 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 74 85 - T 22-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site SRM_RS03395 de39e03a9bf735e275cd9a2ae133ab42 239 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 114 125 - T 22-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site SRM_RS03395 de39e03a9bf735e275cd9a2ae133ab42 239 Gene3D G3DSA:3.30.70.20 38 132 3.3E-17 T 22-04-2016 SRM_RS09205 94f91ffa6a44b2fc5716526ddc15df87 135 PANTHER PTHR30558 9 129 7.6E-21 T 22-04-2016 SRM_RS09205 94f91ffa6a44b2fc5716526ddc15df87 135 PANTHER PTHR30558:SF3 9 129 7.6E-21 T 22-04-2016 SRM_RS09205 94f91ffa6a44b2fc5716526ddc15df87 135 Pfam PF02472 Biopolymer transport protein ExbD/TolR 11 123 5.2E-21 T 22-04-2016 IPR003400 Biopolymer transport protein ExbD/TolR GO:0005215|GO:0006810|GO:0016020 SRM_RS05365 8209a5be3adc2df1934a26ed878f76dd 324 Pfam PF00365 Phosphofructokinase 4 280 2.9E-99 T 22-04-2016 IPR000023 Phosphofructokinase domain GO:0003872|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: REACT_474|UniPathway: UPA00109 SRM_RS05365 8209a5be3adc2df1934a26ed878f76dd 324 Gene3D G3DSA:3.40.50.450 4 211 5.1E-71 T 22-04-2016 SRM_RS05365 8209a5be3adc2df1934a26ed878f76dd 324 PIRSF PIRSF000532 1 323 3.4E-117 T 22-04-2016 IPR012003 ATP-dependent 6-phosphofructokinase, prokaryotic-type GO:0005524|GO:0006002|GO:0006096|GO:0008443 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|UniPathway: UPA00109 SRM_RS05365 8209a5be3adc2df1934a26ed878f76dd 324 PANTHER PTHR13697:SF4 3 313 1.8E-117 T 22-04-2016 SRM_RS05365 8209a5be3adc2df1934a26ed878f76dd 324 PANTHER PTHR13697 3 313 1.8E-117 T 22-04-2016 SRM_RS05365 8209a5be3adc2df1934a26ed878f76dd 324 Hamap MF_00339 ATP-dependent 6-phosphofructokinase [pfkA]. 1 324 43.403 T 22-04-2016 IPR012828 ATP-dependent 6-phosphofructokinase, prokaryotic GO:0003872|GO:0005524|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|UniPathway: UPA00109 SRM_RS05365 8209a5be3adc2df1934a26ed878f76dd 324 TIGRFAM TIGR02482 PFKA_ATP: 6-phosphofructokinase 3 305 1.6E-120 T 22-04-2016 IPR012828 ATP-dependent 6-phosphofructokinase, prokaryotic GO:0003872|GO:0005524|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|UniPathway: UPA00109 SRM_RS05365 8209a5be3adc2df1934a26ed878f76dd 324 ProSitePatterns PS00433 Phosphofructokinase signature. 249 267 - T 22-04-2016 IPR015912 Phosphofructokinase, conserved site GO:0003872|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: REACT_474|UniPathway: UPA00109 SRM_RS05365 8209a5be3adc2df1934a26ed878f76dd 324 SUPERFAMILY SSF53784 4 320 6.15E-107 T 22-04-2016 IPR000023 Phosphofructokinase domain GO:0003872|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: REACT_474|UniPathway: UPA00109 SRM_RS05365 8209a5be3adc2df1934a26ed878f76dd 324 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 159 175 4.9E-75 T 22-04-2016 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: REACT_474|UniPathway: UPA00109 SRM_RS05365 8209a5be3adc2df1934a26ed878f76dd 324 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 31 44 4.9E-75 T 22-04-2016 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: REACT_474|UniPathway: UPA00109 SRM_RS05365 8209a5be3adc2df1934a26ed878f76dd 324 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 177 194 4.9E-75 T 22-04-2016 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: REACT_474|UniPathway: UPA00109 SRM_RS05365 8209a5be3adc2df1934a26ed878f76dd 324 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 6 25 4.9E-75 T 22-04-2016 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: REACT_474|UniPathway: UPA00109 SRM_RS05365 8209a5be3adc2df1934a26ed878f76dd 324 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 245 267 4.9E-75 T 22-04-2016 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: REACT_474|UniPathway: UPA00109 SRM_RS05365 8209a5be3adc2df1934a26ed878f76dd 324 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 213 225 4.9E-75 T 22-04-2016 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: REACT_474|UniPathway: UPA00109 SRM_RS05365 8209a5be3adc2df1934a26ed878f76dd 324 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 93 109 4.9E-75 T 22-04-2016 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: REACT_474|UniPathway: UPA00109 SRM_RS05365 8209a5be3adc2df1934a26ed878f76dd 324 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 139 157 4.9E-75 T 22-04-2016 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: REACT_474|UniPathway: UPA00109 SRM_RS05365 8209a5be3adc2df1934a26ed878f76dd 324 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 121 138 4.9E-75 T 22-04-2016 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: REACT_474|UniPathway: UPA00109 SRM_RS08555 683fe5d2db2867cf2fe6c0875b486573 649 SUPERFAMILY SSF58104 299 601 1.22E-66 T 22-04-2016 SRM_RS08555 683fe5d2db2867cf2fe6c0875b486573 649 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 391 599 4.4E-51 T 22-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 SRM_RS08555 683fe5d2db2867cf2fe6c0875b486573 649 Gene3D G3DSA:1.10.287.950 359 570 1.5E-55 T 22-04-2016 SRM_RS08555 683fe5d2db2867cf2fe6c0875b486573 649 Gene3D G3DSA:1.10.287.950 290 358 3.5E-4 T 22-04-2016 SRM_RS08555 683fe5d2db2867cf2fe6c0875b486573 649 SMART SM00283 333 600 1.7E-76 T 22-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 SRM_RS08555 683fe5d2db2867cf2fe6c0875b486573 649 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 354 383 2.1E-10 T 22-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 SRM_RS08555 683fe5d2db2867cf2fe6c0875b486573 649 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 431 458 2.1E-10 T 22-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 SRM_RS08555 683fe5d2db2867cf2fe6c0875b486573 649 PANTHER PTHR32089 301 603 6.6E-90 T 22-04-2016 SRM_RS01555 52996a6d53d8ba6979cfc58a7bf23fe5 292 ProSitePatterns PS00211 ABC transporters family signature. 134 148 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 SRM_RS01555 52996a6d53d8ba6979cfc58a7bf23fe5 292 PANTHER PTHR24220 4 279 1.2E-105 T 22-04-2016 SRM_RS01555 52996a6d53d8ba6979cfc58a7bf23fe5 292 SMART SM00382 27 210 1.6E-9 T 22-04-2016 IPR003593 AAA+ ATPase domain SRM_RS01555 52996a6d53d8ba6979cfc58a7bf23fe5 292 Gene3D G3DSA:3.40.50.300 2 224 1.2E-64 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SRM_RS01555 52996a6d53d8ba6979cfc58a7bf23fe5 292 PANTHER PTHR24220:SF331 4 279 1.2E-105 T 22-04-2016 SRM_RS01555 52996a6d53d8ba6979cfc58a7bf23fe5 292 SUPERFAMILY SSF52540 3 223 2.02E-58 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SRM_RS01555 52996a6d53d8ba6979cfc58a7bf23fe5 292 Pfam PF00005 ABC transporter 20 161 3.5E-29 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 SRM_RS14865 1e91e453a744f33f4d94574ff27287ed 460 Pfam PF01734 Patatin-like phospholipase 41 253 3.5E-22 T 22-04-2016 IPR002641 Patatin/Phospholipase A2-related GO:0006629 SRM_RS14865 1e91e453a744f33f4d94574ff27287ed 460 Gene3D G3DSA:3.40.1090.10 41 113 4.4E-10 T 22-04-2016 SRM_RS14865 1e91e453a744f33f4d94574ff27287ed 460 Gene3D G3DSA:3.40.1090.10 157 250 4.4E-10 T 22-04-2016 SRM_RS14865 1e91e453a744f33f4d94574ff27287ed 460 SUPERFAMILY SSF52151 38 114 3.66E-38 T 22-04-2016 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase GO:0008152 SRM_RS14865 1e91e453a744f33f4d94574ff27287ed 460 SUPERFAMILY SSF52151 162 376 3.66E-38 T 22-04-2016 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase GO:0008152 SRM_RS11595 08ffeb61783c1944ec11b56113d1afe2 514 Gene3D G3DSA:1.10.579.10 315 417 1.3E-5 T 22-04-2016 SRM_RS11595 08ffeb61783c1944ec11b56113d1afe2 514 Pfam PF04244 Deoxyribodipyrimidine photo-lyase-related protein 5 230 1.5E-66 T 22-04-2016 IPR007357 Deoxyribodipyrimidine photolyase-related protein SRM_RS11595 08ffeb61783c1944ec11b56113d1afe2 514 Gene3D G3DSA:1.25.40.80 151 162 6.8E-11 T 22-04-2016 SRM_RS11595 08ffeb61783c1944ec11b56113d1afe2 514 Gene3D G3DSA:1.25.40.80 230 314 6.8E-11 T 22-04-2016 SRM_RS11595 08ffeb61783c1944ec11b56113d1afe2 514 SUPERFAMILY SSF48173 229 486 4.97E-54 T 22-04-2016 IPR005101 Cryptochrome/DNA photolyase, FAD-binding domain SRM_RS11595 08ffeb61783c1944ec11b56113d1afe2 514 PANTHER PTHR38657 1 514 9.5E-201 T 22-04-2016 SRM_RS11595 08ffeb61783c1944ec11b56113d1afe2 514 PANTHER PTHR38657:SF1 1 514 9.5E-201 T 22-04-2016 SRM_RS03680 8104eda262326d14ba77dae048e41ea5 207 SMART SM00116 82 129 7.3E-6 T 22-04-2016 IPR000644 CBS domain SRM_RS03680 8104eda262326d14ba77dae048e41ea5 207 SMART SM00116 156 203 6.4E-11 T 22-04-2016 IPR000644 CBS domain SRM_RS03680 8104eda262326d14ba77dae048e41ea5 207 SUPERFAMILY SSF54631 72 204 4.01E-32 T 22-04-2016 SRM_RS03680 8104eda262326d14ba77dae048e41ea5 207 PANTHER PTHR11911 72 199 7.4E-27 T 22-04-2016 SRM_RS03680 8104eda262326d14ba77dae048e41ea5 207 Pfam PF00571 CBS domain 77 129 2.4E-12 T 22-04-2016 IPR000644 CBS domain SRM_RS03680 8104eda262326d14ba77dae048e41ea5 207 Pfam PF00571 CBS domain 149 202 3.5E-12 T 22-04-2016 IPR000644 CBS domain SRM_RS03680 8104eda262326d14ba77dae048e41ea5 207 Gene3D G3DSA:3.10.580.10 73 203 1.9E-31 T 22-04-2016 SRM_RS05660 8537e442e89155d714821dca4723d09a 793 SUPERFAMILY SSF48452 438 469 7.97E-5 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 SRM_RS05660 8537e442e89155d714821dca4723d09a 793 SUPERFAMILY SSF48452 298 351 7.97E-5 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 SRM_RS05660 8537e442e89155d714821dca4723d09a 793 Gene3D G3DSA:1.25.40.10 680 760 5.5E-6 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 SRM_RS05660 8537e442e89155d714821dca4723d09a 793 SUPERFAMILY SSF48452 619 756 3.16E-10 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 SRM_RS05660 8537e442e89155d714821dca4723d09a 793 Gene3D G3DSA:1.25.40.10 622 679 1.7E-5 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 SRM_RS05660 8537e442e89155d714821dca4723d09a 793 Gene3D G3DSA:1.25.40.10 299 330 1.7E-5 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 SRM_RS13975 99e35a5870d0a8b9c721214a4569a09b 176 Pfam PF05597 Poly(hydroxyalcanoate) granule associated protein (phasin) 61 168 1.0E-18 T 22-04-2016 IPR008769 Poly granule associated SRM_RS02710 157c2c713804228cb30359f622b1dace 648 PANTHER PTHR11819 117 615 3.2E-133 T 22-04-2016 IPR001734 Sodium/solute symporter GO:0005215|GO:0006810|GO:0016020|GO:0055085 SRM_RS02710 157c2c713804228cb30359f622b1dace 648 TIGRFAM TIGR00813 sss: transporter, solute:sodium symporter (SSS) family 148 550 2.2E-98 T 22-04-2016 IPR001734 Sodium/solute symporter GO:0005215|GO:0006810|GO:0016020|GO:0055085 SRM_RS02710 157c2c713804228cb30359f622b1dace 648 Pfam PF00474 Sodium:solute symporter family 149 550 6.0E-75 T 22-04-2016 IPR001734 Sodium/solute symporter GO:0005215|GO:0006810|GO:0016020|GO:0055085 SRM_RS02710 157c2c713804228cb30359f622b1dace 648 PANTHER PTHR11819:SF7 117 615 3.2E-133 T 22-04-2016 SRM_RS04345 fd1685edd1e14af6ab709314c7e24dda 77 Gene3D G3DSA:1.10.150.20 14 48 5.8E-4 T 22-04-2016 SRM_RS03300 f9ea7c5940c2cc31127cf07e647061e7 162 PANTHER PTHR11071 23 153 7.5E-65 T 22-04-2016 IPR024936 Cyclophilin-type peptidyl-prolyl cis-trans isomerase GO:0003755|GO:0006457 SRM_RS03300 f9ea7c5940c2cc31127cf07e647061e7 162 SUPERFAMILY SSF50891 23 155 7.31E-58 T 22-04-2016 IPR029000 Cyclophilin-like domain SRM_RS03300 f9ea7c5940c2cc31127cf07e647061e7 162 ProSitePatterns PS00170 Cyclophilin-type peptidyl-prolyl cis-trans isomerase signature. 57 74 - T 22-04-2016 IPR020892 Cyclophilin-type peptidyl-prolyl cis-trans isomerase, conserved site GO:0003755|GO:0006457 SRM_RS03300 f9ea7c5940c2cc31127cf07e647061e7 162 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 102 117 3.0E-32 T 22-04-2016 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755|GO:0006457 SRM_RS03300 f9ea7c5940c2cc31127cf07e647061e7 162 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 130 145 3.0E-32 T 22-04-2016 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755|GO:0006457 SRM_RS03300 f9ea7c5940c2cc31127cf07e647061e7 162 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 62 74 3.0E-32 T 22-04-2016 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755|GO:0006457 SRM_RS03300 f9ea7c5940c2cc31127cf07e647061e7 162 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 36 51 3.0E-32 T 22-04-2016 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755|GO:0006457 SRM_RS03300 f9ea7c5940c2cc31127cf07e647061e7 162 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 117 129 3.0E-32 T 22-04-2016 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755|GO:0006457 SRM_RS03300 f9ea7c5940c2cc31127cf07e647061e7 162 PIRSF PIRSF001467 12 162 1.4E-53 T 22-04-2016 IPR024936 Cyclophilin-type peptidyl-prolyl cis-trans isomerase GO:0003755|GO:0006457 SRM_RS03300 f9ea7c5940c2cc31127cf07e647061e7 162 Gene3D G3DSA:2.40.100.10 19 153 8.3E-59 T 22-04-2016 IPR029000 Cyclophilin-like domain SRM_RS03300 f9ea7c5940c2cc31127cf07e647061e7 162 Pfam PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 24 155 2.4E-50 T 22-04-2016 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755|GO:0006457 SRM_RS01655 23287dd249568ad46147be90ce01b8be 295 Gene3D G3DSA:3.40.50.1000 130 293 1.3E-31 T 22-04-2016 IPR023214 HAD-like domain SRM_RS01655 23287dd249568ad46147be90ce01b8be 295 Pfam PF13242 HAD-hyrolase-like 219 289 1.9E-6 T 22-04-2016 SRM_RS01655 23287dd249568ad46147be90ce01b8be 295 SUPERFAMILY SSF56784 21 46 8.11E-16 T 22-04-2016 IPR023214 HAD-like domain SRM_RS01655 23287dd249568ad46147be90ce01b8be 295 SUPERFAMILY SSF56784 89 293 8.11E-16 T 22-04-2016 IPR023214 HAD-like domain SRM_RS02645 bc5e2ab2040db2547f8ad21588ae25bd 234 Pfam PF03886 ABC-type transport auxiliary lipoprotein component 51 224 7.4E-30 T 22-04-2016 IPR005586 ABC-type transport auxiliary lipoprotein component SRM_RS02645 bc5e2ab2040db2547f8ad21588ae25bd 234 Gene3D G3DSA:3.40.50.10610 39 226 4.0E-12 T 22-04-2016 IPR005586 ABC-type transport auxiliary lipoprotein component SRM_RS02645 bc5e2ab2040db2547f8ad21588ae25bd 234 SUPERFAMILY SSF159594 42 232 9.42E-26 T 22-04-2016 SRM_RS08060 fcaa2708806ccd74a639b76f90bf8e80 715 Gene3D G3DSA:2.60.450.10 124 213 3.4E-17 T 22-04-2016 SRM_RS08060 fcaa2708806ccd74a639b76f90bf8e80 715 Gene3D G3DSA:2.60.450.10 214 252 1.2E-6 T 22-04-2016 SRM_RS08060 fcaa2708806ccd74a639b76f90bf8e80 715 Gene3D G3DSA:2.60.450.10 328 345 1.2E-6 T 22-04-2016 SRM_RS08060 fcaa2708806ccd74a639b76f90bf8e80 715 Pfam PF13100 OstA-like protein 92 230 2.2E-14 T 22-04-2016 IPR005653 Organic solvent tolerance-like, N-terminal SRM_RS01875 295731eaee344a7d1a74e155dfdd35b1 254 Pfam PF13469 Sulfotransferase family 58 197 2.8E-7 T 22-04-2016 SRM_RS01875 295731eaee344a7d1a74e155dfdd35b1 254 Gene3D G3DSA:3.40.50.300 66 205 5.0E-9 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SRM_RS01875 295731eaee344a7d1a74e155dfdd35b1 254 Gene3D G3DSA:3.40.50.300 6 27 5.0E-9 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SRM_RS01875 295731eaee344a7d1a74e155dfdd35b1 254 SUPERFAMILY SSF52540 3 245 3.47E-22 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SRM_RS03355 04d79ced82fd6c149f1b1b610d0d339d 596 Pfam PF10150 Ribonuclease E/G family 138 407 1.4E-93 T 22-04-2016 IPR019307 RNA-binding protein AU-1/Ribonuclease E/G GO:0003723 SRM_RS03355 04d79ced82fd6c149f1b1b610d0d339d 596 PANTHER PTHR30001 1 417 2.0E-144 T 22-04-2016 SRM_RS03355 04d79ced82fd6c149f1b1b610d0d339d 596 SMART SM00316 37 136 5.4E-8 T 22-04-2016 IPR022967 RNA-binding domain, S1 SRM_RS03355 04d79ced82fd6c149f1b1b610d0d339d 596 SUPERFAMILY SSF50249 39 142 7.58E-17 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold SRM_RS03355 04d79ced82fd6c149f1b1b610d0d339d 596 TIGRFAM TIGR00757 RNaseEG: ribonuclease, Rne/Rng family 14 417 7.8E-131 T 22-04-2016 IPR004659 Ribonuclease E/G GO:0003723|GO:0004540|GO:0006396 SRM_RS03355 04d79ced82fd6c149f1b1b610d0d339d 596 Gene3D G3DSA:2.40.50.140 30 142 8.1E-28 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold SRM_RS03355 04d79ced82fd6c149f1b1b610d0d339d 596 Pfam PF00575 S1 RNA binding domain 38 124 2.4E-4 T 22-04-2016 IPR003029 S1 domain GO:0003676 SRM_RS04205 5b4c2ff0fcffe1f39972dc24f5672960 197 Pfam PF13338 Transcriptional regulator, AbiEi antitoxin 26 97 1.7E-21 T 22-04-2016 IPR025159 Transcriptional regulator, AbiEi antitoxin SRM_RS04875 5cc324f1a6cd0909e49b2eab8a7625b9 64 TIGRFAM TIGR01552 phd_fam: prevent-host-death family protein 12 59 2.2E-10 T 22-04-2016 IPR006442 Type II toxin-antitoxin system, antitoxin Phd/YefM SRM_RS04875 5cc324f1a6cd0909e49b2eab8a7625b9 64 Gene3D G3DSA:3.40.1620.10 12 57 1.2E-6 T 22-04-2016 IPR006442 Type II toxin-antitoxin system, antitoxin Phd/YefM SRM_RS04875 5cc324f1a6cd0909e49b2eab8a7625b9 64 SUPERFAMILY SSF143120 11 62 1.83E-12 T 22-04-2016 SRM_RS04875 5cc324f1a6cd0909e49b2eab8a7625b9 64 Pfam PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system 11 63 1.8E-11 T 22-04-2016 IPR006442 Type II toxin-antitoxin system, antitoxin Phd/YefM SRM_RS03115 f743d01244ba5fc129f17a6ad9f6a7df 393 Gene3D G3DSA:3.40.50.2000 15 128 2.2E-4 T 22-04-2016 SRM_RS03115 f743d01244ba5fc129f17a6ad9f6a7df 393 Pfam PF13528 Glycosyl transferase family 1 14 336 5.4E-38 T 22-04-2016 SRM_RS03115 f743d01244ba5fc129f17a6ad9f6a7df 393 Gene3D G3DSA:3.40.50.2000 276 346 4.6E-8 T 22-04-2016 SRM_RS03115 f743d01244ba5fc129f17a6ad9f6a7df 393 SUPERFAMILY SSF53756 11 364 1.28E-20 T 22-04-2016 SRM_RS15835 873b2e4428e21c5f6ee682ebbac51183 224 TIGRFAM TIGR03593 yidC_nterm: membrane protein insertase, YidC/Oxa1 family, N-terminal domain 16 174 2.9E-17 T 22-04-2016 IPR028053 Membrane insertase YidC, N-terminal SRM_RS15835 873b2e4428e21c5f6ee682ebbac51183 224 Pfam PF14849 YidC periplasmic domain 63 215 2.2E-17 T 22-04-2016 IPR028053 Membrane insertase YidC, N-terminal SRM_RS11080 38948840dc5f5bae3ee8f5de42b6bcf0 174 TIGRFAM TIGR00040 yfcE: phosphodiesterase, MJ0936 family 4 156 2.9E-22 T 22-04-2016 IPR000979 Phosphodiesterase MJ0936/Vps29 SRM_RS11080 38948840dc5f5bae3ee8f5de42b6bcf0 174 Pfam PF12850 Calcineurin-like phosphoesterase superfamily domain 4 151 2.4E-28 T 22-04-2016 IPR024654 Calcineurin-like phosphoesterase domain, lpxH type SRM_RS11080 38948840dc5f5bae3ee8f5de42b6bcf0 174 SUPERFAMILY SSF56300 4 165 1.1E-30 T 22-04-2016 IPR029052 Metallo-dependent phosphatase-like SRM_RS11080 38948840dc5f5bae3ee8f5de42b6bcf0 174 PANTHER PTHR11124 4 134 2.0E-19 T 22-04-2016 IPR000979 Phosphodiesterase MJ0936/Vps29 SRM_RS11080 38948840dc5f5bae3ee8f5de42b6bcf0 174 Gene3D G3DSA:3.60.21.10 4 154 1.6E-27 T 22-04-2016 IPR029052 Metallo-dependent phosphatase-like SRM_RS14345 458bbad3b2bdd9cad3dbd511b91f81c9 525 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 264 467 6.6E-55 T 22-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 SRM_RS14345 458bbad3b2bdd9cad3dbd511b91f81c9 525 SUPERFAMILY SSF158472 55 99 3.14E-5 T 22-04-2016 SRM_RS14345 458bbad3b2bdd9cad3dbd511b91f81c9 525 SMART SM00283 201 468 2.4E-81 T 22-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 SRM_RS14345 458bbad3b2bdd9cad3dbd511b91f81c9 525 Gene3D G3DSA:1.10.287.950 216 438 1.5E-56 T 22-04-2016 SRM_RS14345 458bbad3b2bdd9cad3dbd511b91f81c9 525 SMART SM00304 129 186 0.0023 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 SRM_RS14345 458bbad3b2bdd9cad3dbd511b91f81c9 525 SMART SM00304 193 246 81.0 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 SRM_RS14345 458bbad3b2bdd9cad3dbd511b91f81c9 525 SMART SM00304 49 101 1.5E-5 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 SRM_RS14345 458bbad3b2bdd9cad3dbd511b91f81c9 525 Pfam PF00672 HAMP domain 32 96 2.5E-6 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 SRM_RS14345 458bbad3b2bdd9cad3dbd511b91f81c9 525 PANTHER PTHR32089 169 471 2.4E-102 T 22-04-2016 SRM_RS14345 458bbad3b2bdd9cad3dbd511b91f81c9 525 PANTHER PTHR32089 18 83 2.4E-102 T 22-04-2016 SRM_RS14345 458bbad3b2bdd9cad3dbd511b91f81c9 525 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 299 326 1.1E-10 T 22-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 SRM_RS14345 458bbad3b2bdd9cad3dbd511b91f81c9 525 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 222 251 1.1E-10 T 22-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 SRM_RS14345 458bbad3b2bdd9cad3dbd511b91f81c9 525 SUPERFAMILY SSF58104 159 469 2.27E-72 T 22-04-2016 SRM_RS10530 b2bf61055f615b796afa236c70ddc510 535 SUPERFAMILY SSF53795 214 529 2.04E-130 T 22-04-2016 SRM_RS10530 b2bf61055f615b796afa236c70ddc510 535 PANTHER PTHR30031 21 531 1.8E-283 T 22-04-2016 SRM_RS10530 b2bf61055f615b796afa236c70ddc510 535 Gene3D G3DSA:3.40.449.10 20 212 2.1E-75 T 22-04-2016 IPR008210 Phosphoenolpyruvate carboxykinase, N-terminal GO:0004611|GO:0006094|GO:0017076 Reactome: REACT_474|UniPathway: UPA00138 SRM_RS10530 b2bf61055f615b796afa236c70ddc510 535 Pfam PF01293 Phosphoenolpyruvate carboxykinase 20 482 1.3E-212 T 22-04-2016 IPR001272 Phosphoenolpyruvate carboxykinase, ATP-utilising GO:0004612|GO:0005524|GO:0006094 KEGG: 00010+4.1.1.49|KEGG: 00020+4.1.1.49|KEGG: 00620+4.1.1.49|KEGG: 00710+4.1.1.49|MetaCyc: PWY-561|MetaCyc: PWY-7117|UniPathway: UPA00138 SRM_RS10530 b2bf61055f615b796afa236c70ddc510 535 PIRSF PIRSF006294 4 530 2.5E-223 T 22-04-2016 IPR001272 Phosphoenolpyruvate carboxykinase, ATP-utilising GO:0004612|GO:0005524|GO:0006094 KEGG: 00010+4.1.1.49|KEGG: 00020+4.1.1.49|KEGG: 00620+4.1.1.49|KEGG: 00710+4.1.1.49|MetaCyc: PWY-561|MetaCyc: PWY-7117|UniPathway: UPA00138 SRM_RS10530 b2bf61055f615b796afa236c70ddc510 535 SUPERFAMILY SSF68923 17 213 1.6E-75 T 22-04-2016 IPR008210 Phosphoenolpyruvate carboxykinase, N-terminal GO:0004611|GO:0006094|GO:0017076 Reactome: REACT_474|UniPathway: UPA00138 SRM_RS10530 b2bf61055f615b796afa236c70ddc510 535 Gene3D G3DSA:3.90.228.20 214 276 5.6E-117 T 22-04-2016 IPR013035 Phosphoenolpyruvate carboxykinase, C-terminal GO:0004611|GO:0006094|GO:0017076 Reactome: REACT_474|UniPathway: UPA00138 SRM_RS10530 b2bf61055f615b796afa236c70ddc510 535 Gene3D G3DSA:3.90.228.20 338 528 5.6E-117 T 22-04-2016 IPR013035 Phosphoenolpyruvate carboxykinase, C-terminal GO:0004611|GO:0006094|GO:0017076 Reactome: REACT_474|UniPathway: UPA00138 SRM_RS10530 b2bf61055f615b796afa236c70ddc510 535 TIGRFAM TIGR00224 pckA: phosphoenolpyruvate carboxykinase (ATP) 19 529 7.6E-202 T 22-04-2016 IPR001272 Phosphoenolpyruvate carboxykinase, ATP-utilising GO:0004612|GO:0005524|GO:0006094 KEGG: 00010+4.1.1.49|KEGG: 00020+4.1.1.49|KEGG: 00620+4.1.1.49|KEGG: 00710+4.1.1.49|MetaCyc: PWY-561|MetaCyc: PWY-7117|UniPathway: UPA00138 SRM_RS10530 b2bf61055f615b796afa236c70ddc510 535 ProSitePatterns PS00532 Phosphoenolpyruvate carboxykinase (ATP) signature. 251 266 - T 22-04-2016 IPR015994 Phosphoenolpyruvate carboxykinase (ATP), conserved site GO:0004612|GO:0005524|GO:0006094 KEGG: 00010+4.1.1.49|KEGG: 00020+4.1.1.49|KEGG: 00620+4.1.1.49|KEGG: 00710+4.1.1.49|MetaCyc: PWY-561|MetaCyc: PWY-7117|UniPathway: UPA00138 SRM_RS10530 b2bf61055f615b796afa236c70ddc510 535 Hamap MF_00453 Phosphoenolpyruvate carboxykinase [ATP] [pckA]. 15 530 52.241 T 22-04-2016 IPR001272 Phosphoenolpyruvate carboxykinase, ATP-utilising GO:0004612|GO:0005524|GO:0006094 KEGG: 00010+4.1.1.49|KEGG: 00020+4.1.1.49|KEGG: 00620+4.1.1.49|KEGG: 00710+4.1.1.49|MetaCyc: PWY-561|MetaCyc: PWY-7117|UniPathway: UPA00138 SRM_RS10530 b2bf61055f615b796afa236c70ddc510 535 PANTHER PTHR30031:SF0 21 531 1.8E-283 T 22-04-2016 SRM_RS06865 f922eaa607cbfb61ddca914062a2248e 333 Gene3D G3DSA:3.30.470.20 195 330 2.0E-24 T 22-04-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 SRM_RS06865 f922eaa607cbfb61ddca914062a2248e 333 PANTHER PTHR23132 64 329 1.0E-44 T 22-04-2016 SRM_RS06865 f922eaa607cbfb61ddca914062a2248e 333 Gene3D G3DSA:3.30.1490.20 102 193 3.8E-11 T 22-04-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 SRM_RS06865 f922eaa607cbfb61ddca914062a2248e 333 SUPERFAMILY SSF56059 109 321 1.1E-34 T 22-04-2016 SRM_RS06865 f922eaa607cbfb61ddca914062a2248e 333 Pfam PF07478 D-ala D-ala ligase C-terminus 144 318 5.8E-23 T 22-04-2016 IPR011095 D-alanine--D-alanine ligase, C-terminal GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 SRM_RS12525 337888bb6b576adf97bc1c7b9d848446 352 Pfam PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain 204 347 2.9E-34 T 22-04-2016 IPR006131 Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain GO:0006520|GO:0016597|GO:0016743 SRM_RS12525 337888bb6b576adf97bc1c7b9d848446 352 Pfam PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain 20 178 7.5E-26 T 22-04-2016 IPR006132 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding GO:0006520|GO:0016743 SRM_RS12525 337888bb6b576adf97bc1c7b9d848446 352 PANTHER PTHR11405:SF1 20 349 4.1E-57 T 22-04-2016 SRM_RS12525 337888bb6b576adf97bc1c7b9d848446 352 Gene3D G3DSA:3.40.50.1370 19 176 9.7E-37 T 22-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 SRM_RS12525 337888bb6b576adf97bc1c7b9d848446 352 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 62 81 7.3E-11 T 22-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 SRM_RS12525 337888bb6b576adf97bc1c7b9d848446 352 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 315 338 7.3E-11 T 22-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 SRM_RS12525 337888bb6b576adf97bc1c7b9d848446 352 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 303 312 7.3E-11 T 22-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 SRM_RS12525 337888bb6b576adf97bc1c7b9d848446 352 SUPERFAMILY SSF53671 18 350 8.64E-60 T 22-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 SRM_RS12525 337888bb6b576adf97bc1c7b9d848446 352 PANTHER PTHR11405 20 349 4.1E-57 T 22-04-2016 SRM_RS12525 337888bb6b576adf97bc1c7b9d848446 352 PRINTS PR00101 Aspartate carbamoyltransferase signature 52 74 5.5E-6 T 22-04-2016 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|UniPathway: UPA00070 SRM_RS12525 337888bb6b576adf97bc1c7b9d848446 352 PRINTS PR00101 Aspartate carbamoyltransferase signature 331 345 5.5E-6 T 22-04-2016 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|UniPathway: UPA00070 SRM_RS12525 337888bb6b576adf97bc1c7b9d848446 352 PRINTS PR00101 Aspartate carbamoyltransferase signature 165 182 5.5E-6 T 22-04-2016 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|UniPathway: UPA00070 SRM_RS12525 337888bb6b576adf97bc1c7b9d848446 352 Gene3D G3DSA:3.40.50.1370 177 336 4.1E-43 T 22-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 SRM_RS15695 8ff5c624b20388b734872834cacd3604 287 Pfam PF00005 ABC transporter 71 219 3.1E-31 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 SRM_RS15695 8ff5c624b20388b734872834cacd3604 287 SMART SM00382 80 267 1.0E-12 T 22-04-2016 IPR003593 AAA+ ATPase domain SRM_RS15695 8ff5c624b20388b734872834cacd3604 287 SUPERFAMILY SSF52540 51 276 7.66E-75 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SRM_RS15695 8ff5c624b20388b734872834cacd3604 287 PANTHER PTHR24220 53 286 5.7E-121 T 22-04-2016 SRM_RS15695 8ff5c624b20388b734872834cacd3604 287 PANTHER PTHR24220:SF578 53 286 5.7E-121 T 22-04-2016 SRM_RS15695 8ff5c624b20388b734872834cacd3604 287 Gene3D G3DSA:3.40.50.300 51 276 1.1E-70 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SRM_RS12730 af4bb2b12f38674ae6d70bc5ab53bb6f 754 Pfam PF03522 Solute carrier family 12 617 680 3.6E-7 T 22-04-2016 IPR018491 SLC12A transporter, C-terminal GO:0005215|GO:0006811|GO:0016020 Reactome: REACT_15518 SRM_RS12730 af4bb2b12f38674ae6d70bc5ab53bb6f 754 Pfam PF03522 Solute carrier family 12 495 610 3.8E-10 T 22-04-2016 IPR018491 SLC12A transporter, C-terminal GO:0005215|GO:0006811|GO:0016020 Reactome: REACT_15518 SRM_RS12730 af4bb2b12f38674ae6d70bc5ab53bb6f 754 PANTHER PTHR11827 22 690 3.5E-197 T 22-04-2016 SRM_RS12730 af4bb2b12f38674ae6d70bc5ab53bb6f 754 Pfam PF00324 Amino acid permease 34 471 2.1E-51 T 22-04-2016 IPR004841 Amino acid permease/ SLC12A domain GO:0006810|GO:0016020|GO:0055085 SRM_RS07560 891b07e19a76a9d059aa3b816ae5bc7e 369 TIGRFAM TIGR00765 yihY_not_rbn: YihY family inner membrane protein 30 296 3.1E-26 T 22-04-2016 IPR017039 Virulence factor BrkB SRM_RS07560 891b07e19a76a9d059aa3b816ae5bc7e 369 PANTHER PTHR30213 29 300 4.8E-28 T 22-04-2016 SRM_RS07560 891b07e19a76a9d059aa3b816ae5bc7e 369 Pfam PF03631 Virulence factor BrkB 35 300 4.5E-47 T 22-04-2016 IPR017039 Virulence factor BrkB SRM_RS09070 87b0ba24c82c8a1e1a218dae94f3c9dc 69 PIRSF PIRSF002599 1 68 2.3E-19 T 22-04-2016 IPR012156 Cold shock, CspA GO:0003676 SRM_RS09070 87b0ba24c82c8a1e1a218dae94f3c9dc 69 ProSitePatterns PS00352 'Cold-shock' domain signature. 15 34 - T 22-04-2016 IPR019844 Cold-shock conserved site SRM_RS09070 87b0ba24c82c8a1e1a218dae94f3c9dc 69 PRINTS PR00050 Cold shock protein signature 25 34 5.2E-13 T 22-04-2016 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 SRM_RS09070 87b0ba24c82c8a1e1a218dae94f3c9dc 69 PRINTS PR00050 Cold shock protein signature 41 59 5.2E-13 T 22-04-2016 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 SRM_RS09070 87b0ba24c82c8a1e1a218dae94f3c9dc 69 PRINTS PR00050 Cold shock protein signature 4 19 5.2E-13 T 22-04-2016 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 SRM_RS09070 87b0ba24c82c8a1e1a218dae94f3c9dc 69 SUPERFAMILY SSF50249 1 67 2.36E-20 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold SRM_RS09070 87b0ba24c82c8a1e1a218dae94f3c9dc 69 Gene3D G3DSA:2.40.50.140 1 68 2.7E-26 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold SRM_RS09070 87b0ba24c82c8a1e1a218dae94f3c9dc 69 SMART SM00357 3 68 7.4E-20 T 22-04-2016 IPR011129 Cold shock protein GO:0003676 SRM_RS09070 87b0ba24c82c8a1e1a218dae94f3c9dc 69 Pfam PF00313 'Cold-shock' DNA-binding domain 3 64 4.6E-22 T 22-04-2016 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 SRM_RS09070 87b0ba24c82c8a1e1a218dae94f3c9dc 69 PANTHER PTHR11544 1 64 2.7E-18 T 22-04-2016 SRM_RS06320 b63cb24ac2d1450bc32be022ef442487 357 Pfam PF02272 DHHA1 domain 262 318 3.5E-10 T 22-04-2016 IPR003156 DHHA1 domain GO:0003676 KEGG: 00970+6.1.1.7 SRM_RS06320 b63cb24ac2d1450bc32be022ef442487 357 Gene3D G3DSA:3.90.1640.10 13 202 4.8E-25 T 22-04-2016 SRM_RS06320 b63cb24ac2d1450bc32be022ef442487 357 SUPERFAMILY SSF64182 12 317 2.22E-56 T 22-04-2016 SRM_RS06320 b63cb24ac2d1450bc32be022ef442487 357 Pfam PF01368 DHH family 14 163 2.7E-13 T 22-04-2016 IPR001667 DDH domain SRM_RS09885 f8d716581aae8389538588d68684f6c0 334 PANTHER PTHR10794 180 281 2.6E-14 T 22-04-2016 SRM_RS09885 f8d716581aae8389538588d68684f6c0 334 Pfam PF02517 CAAX protease self-immunity 185 272 4.1E-20 T 22-04-2016 IPR003675 CAAX amino terminal protease GO:0016020 SRM_RS03900 c18312c9c15285faa851a65704d12ebc 139 Gene3D G3DSA:1.20.120.330 9 130 4.2E-32 T 22-04-2016 SRM_RS03900 c18312c9c15285faa851a65704d12ebc 139 SUPERFAMILY SSF81593 11 129 6.28E-25 T 22-04-2016 SRM_RS03900 c18312c9c15285faa851a65704d12ebc 139 PANTHER PTHR15600 13 133 4.5E-19 T 22-04-2016 SRM_RS03900 c18312c9c15285faa851a65704d12ebc 139 SMART SM00748 16 122 2.9E-11 T 22-04-2016 IPR007842 HEPN domain SRM_RS03900 c18312c9c15285faa851a65704d12ebc 139 Pfam PF05168 HEPN domain 14 128 6.1E-29 T 22-04-2016 IPR007842 HEPN domain SRM_RS05880 65927a13bb6d2ff7d5685fa31a04254d 268 PANTHER PTHR30535 6 254 5.5E-36 T 22-04-2016 SRM_RS05880 65927a13bb6d2ff7d5685fa31a04254d 268 Gene3D G3DSA:3.40.50.1980 145 254 2.2E-15 T 22-04-2016 SRM_RS05880 65927a13bb6d2ff7d5685fa31a04254d 268 Gene3D G3DSA:3.40.50.1980 18 134 2.3E-21 T 22-04-2016 SRM_RS05880 65927a13bb6d2ff7d5685fa31a04254d 268 PANTHER PTHR30535:SF6 6 254 5.5E-36 T 22-04-2016 SRM_RS05880 65927a13bb6d2ff7d5685fa31a04254d 268 SUPERFAMILY SSF53807 5 251 4.32E-45 T 22-04-2016 SRM_RS05880 65927a13bb6d2ff7d5685fa31a04254d 268 Pfam PF01497 Periplasmic binding protein 23 214 2.8E-22 T 22-04-2016 IPR002491 ABC transporter periplasmic binding domain GO:0005488 SRM_RS12505 811b7560247185c469d97c8509066acc 413 PANTHER PTHR11587:SF2 3 401 1.3E-126 T 22-04-2016 SRM_RS12505 811b7560247185c469d97c8509066acc 413 ProSitePatterns PS00564 Argininosuccinate synthase signature 1. 6 14 - T 22-04-2016 IPR018223 Argininosuccinate synthase, conserved site GO:0004055|GO:0005524|GO:0006526 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 SRM_RS12505 811b7560247185c469d97c8509066acc 413 Gene3D G3DSA:3.90.1260.10 172 396 3.8E-63 T 22-04-2016 IPR024074 Argininosuccinate synthetase, catalytic/multimerisation domain body GO:0004055 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 SRM_RS12505 811b7560247185c469d97c8509066acc 413 Pfam PF00764 Arginosuccinate synthase 4 388 6.8E-97 T 22-04-2016 IPR001518 Argininosuccinate synthase GO:0004055|GO:0005524|GO:0006526 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 SRM_RS12505 811b7560247185c469d97c8509066acc 413 TIGRFAM TIGR00032 argG: argininosuccinate synthase 3 388 1.8E-98 T 22-04-2016 IPR001518 Argininosuccinate synthase GO:0004055|GO:0005524|GO:0006526 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 SRM_RS12505 811b7560247185c469d97c8509066acc 413 SUPERFAMILY SSF69864 172 394 7.72E-63 T 22-04-2016 SRM_RS12505 811b7560247185c469d97c8509066acc 413 PANTHER PTHR11587 3 401 1.3E-126 T 22-04-2016 SRM_RS12505 811b7560247185c469d97c8509066acc 413 Gene3D G3DSA:3.40.50.620 2 170 2.0E-35 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold SRM_RS12505 811b7560247185c469d97c8509066acc 413 SUPERFAMILY SSF52402 3 184 4.89E-33 T 22-04-2016 SRM_RS15090 e9d7d43584e1a980def927f7b37c6a6b 355 SUPERFAMILY SSF144064 11 352 2.06E-119 T 22-04-2016 SRM_RS15090 e9d7d43584e1a980def927f7b37c6a6b 355 Pfam PF05171 Haemin-degrading HemS.ChuX domain 220 351 9.6E-39 T 22-04-2016 IPR007845 Haemin-degrading HemS/ChuX domain GO:0006826 SRM_RS15090 e9d7d43584e1a980def927f7b37c6a6b 355 Pfam PF05171 Haemin-degrading HemS.ChuX domain 36 167 1.5E-40 T 22-04-2016 IPR007845 Haemin-degrading HemS/ChuX domain GO:0006826 SRM_RS15090 e9d7d43584e1a980def927f7b37c6a6b 355 Gene3D G3DSA:3.40.1570.10 216 353 7.8E-8 T 22-04-2016 SRM_RS02955 4c86698c212578a585134642d95e9e6b 325 Pfam PF03734 L,D-transpeptidase catalytic domain 140 247 1.2E-17 T 22-04-2016 IPR005490 L,D-transpeptidase catalytic domain GO:0016740 UniPathway: UPA00219 SRM_RS02955 4c86698c212578a585134642d95e9e6b 325 Gene3D G3DSA:2.40.440.10 138 245 1.2E-13 T 22-04-2016 SRM_RS02955 4c86698c212578a585134642d95e9e6b 325 SUPERFAMILY SSF141523 140 245 2.22E-16 T 22-04-2016 SRM_RS12475 ba55bb5e491d3063c7205d6fdb9d9676 161 Gene3D G3DSA:3.10.50.40 123 140 4.9E-33 T 22-04-2016 SRM_RS12475 ba55bb5e491d3063c7205d6fdb9d9676 161 Gene3D G3DSA:3.10.50.40 4 69 4.9E-33 T 22-04-2016 SRM_RS12475 ba55bb5e491d3063c7205d6fdb9d9676 161 PANTHER PTHR10516 7 71 2.5E-25 T 22-04-2016 IPR023566 Peptidyl-prolyl cis-trans isomerase, FKBP-type SRM_RS12475 ba55bb5e491d3063c7205d6fdb9d9676 161 PANTHER PTHR10516 130 151 2.5E-25 T 22-04-2016 IPR023566 Peptidyl-prolyl cis-trans isomerase, FKBP-type SRM_RS12475 ba55bb5e491d3063c7205d6fdb9d9676 161 Pfam PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase 3 138 4.6E-28 T 22-04-2016 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain GO:0006457 SRM_RS12475 ba55bb5e491d3063c7205d6fdb9d9676 161 SUPERFAMILY SSF54534 4 140 1.71E-43 T 22-04-2016 SRM_RS12535 fc913c003552bc2570d602bb6371a035 361 SUPERFAMILY SSF53187 281 356 2.31E-47 T 22-04-2016 SRM_RS12535 fc913c003552bc2570d602bb6371a035 361 SUPERFAMILY SSF53187 8 171 2.31E-47 T 22-04-2016 SRM_RS12535 fc913c003552bc2570d602bb6371a035 361 ProSitePatterns PS00758 ArgE / dapE / ACY1 / CPG2 / yscS family signature 1. 63 72 - T 22-04-2016 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site GO:0006508|GO:0008237 SRM_RS12535 fc913c003552bc2570d602bb6371a035 361 SUPERFAMILY SSF55031 172 270 1.5E-23 T 22-04-2016 IPR011650 Peptidase M20, dimerisation domain SRM_RS12535 fc913c003552bc2570d602bb6371a035 361 PANTHER PTHR11014 10 361 7.0E-72 T 22-04-2016 SRM_RS12535 fc913c003552bc2570d602bb6371a035 361 Gene3D G3DSA:3.40.630.10 300 357 1.2E-55 T 22-04-2016 SRM_RS12535 fc913c003552bc2570d602bb6371a035 361 Gene3D G3DSA:3.40.630.10 8 180 1.2E-55 T 22-04-2016 SRM_RS12535 fc913c003552bc2570d602bb6371a035 361 Gene3D G3DSA:3.30.70.360 181 269 2.9E-27 T 22-04-2016 IPR011650 Peptidase M20, dimerisation domain SRM_RS12535 fc913c003552bc2570d602bb6371a035 361 Pfam PF01546 Peptidase family M20/M25/M40 64 354 2.4E-29 T 22-04-2016 IPR002933 Peptidase M20 GO:0008152|GO:0016787 SRM_RS12535 fc913c003552bc2570d602bb6371a035 361 Pfam PF07687 Peptidase dimerisation domain 168 270 6.0E-22 T 22-04-2016 IPR011650 Peptidase M20, dimerisation domain SRM_RS01960 d255d47cb80a1b4ea9e185404f8aa0b6 96 Pfam PF05402 Coenzyme PQQ synthesis protein D (PqqD) 26 92 1.1E-19 T 22-04-2016 IPR008792 Coenzyme PQQ synthesis D UniPathway: UPA00539 SRM_RS01865 3b8fc0b34dcc31ea7b10a000915e5343 600 SMART SM00382 382 588 4.5E-11 T 22-04-2016 IPR003593 AAA+ ATPase domain SRM_RS01865 3b8fc0b34dcc31ea7b10a000915e5343 600 SUPERFAMILY SSF90123 9 330 1.16E-26 T 22-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 SRM_RS01865 3b8fc0b34dcc31ea7b10a000915e5343 600 PANTHER PTHR24221 3 59 3.7E-119 T 22-04-2016 SRM_RS01865 3b8fc0b34dcc31ea7b10a000915e5343 600 PANTHER PTHR24221 79 600 3.7E-119 T 22-04-2016 SRM_RS01865 3b8fc0b34dcc31ea7b10a000915e5343 600 Pfam PF00005 ABC transporter 373 527 4.9E-32 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 SRM_RS01865 3b8fc0b34dcc31ea7b10a000915e5343 600 Gene3D G3DSA:1.20.1560.10 7 335 1.7E-22 T 22-04-2016 SRM_RS01865 3b8fc0b34dcc31ea7b10a000915e5343 600 PANTHER PTHR24221:SF138 3 59 3.7E-119 T 22-04-2016 SRM_RS01865 3b8fc0b34dcc31ea7b10a000915e5343 600 PANTHER PTHR24221:SF138 79 600 3.7E-119 T 22-04-2016 SRM_RS01865 3b8fc0b34dcc31ea7b10a000915e5343 600 Pfam PF00664 ABC transporter transmembrane region 65 279 4.5E-11 T 22-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 SRM_RS01865 3b8fc0b34dcc31ea7b10a000915e5343 600 SUPERFAMILY SSF52540 346 598 6.89E-80 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SRM_RS01865 3b8fc0b34dcc31ea7b10a000915e5343 600 ProSitePatterns PS00211 ABC transporters family signature. 499 513 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 SRM_RS01865 3b8fc0b34dcc31ea7b10a000915e5343 600 Gene3D G3DSA:3.40.50.300 356 588 1.5E-72 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SRM_RS12835 282fdf3d6e44116f892683dae31bf0e5 234 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 156 175 2.45E-9 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SRM_RS12835 282fdf3d6e44116f892683dae31bf0e5 234 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 80 91 2.45E-9 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SRM_RS12835 282fdf3d6e44116f892683dae31bf0e5 234 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 133 141 2.45E-9 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SRM_RS12835 282fdf3d6e44116f892683dae31bf0e5 234 PANTHER PTHR24320 3 232 3.1E-49 T 22-04-2016 SRM_RS12835 282fdf3d6e44116f892683dae31bf0e5 234 Gene3D G3DSA:3.40.50.720 4 227 9.4E-66 T 22-04-2016 IPR016040 NAD(P)-binding domain SRM_RS12835 282fdf3d6e44116f892683dae31bf0e5 234 SUPERFAMILY SSF51735 3 226 6.67E-59 T 22-04-2016 IPR016040 NAD(P)-binding domain SRM_RS12835 282fdf3d6e44116f892683dae31bf0e5 234 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 156 175 2.57E-26 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SRM_RS12835 282fdf3d6e44116f892683dae31bf0e5 234 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 6 23 2.57E-26 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SRM_RS12835 282fdf3d6e44116f892683dae31bf0e5 234 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 127 143 2.57E-26 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SRM_RS12835 282fdf3d6e44116f892683dae31bf0e5 234 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 178 195 2.57E-26 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SRM_RS12835 282fdf3d6e44116f892683dae31bf0e5 234 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 80 91 2.57E-26 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SRM_RS12835 282fdf3d6e44116f892683dae31bf0e5 234 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 5 192 0.0057 T 22-04-2016 SRM_RS12835 282fdf3d6e44116f892683dae31bf0e5 234 Pfam PF00106 short chain dehydrogenase 6 198 7.2E-42 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SRM_RS10685 91e1bd328078528686a95570bb1c0d66 215 Gene3D G3DSA:3.20.20.370 17 213 4.3E-52 T 22-04-2016 IPR002509 NodB homology domain GO:0005975|GO:0016810 SRM_RS10685 91e1bd328078528686a95570bb1c0d66 215 PANTHER PTHR10587 32 212 1.4E-39 T 22-04-2016 SRM_RS10685 91e1bd328078528686a95570bb1c0d66 215 Pfam PF01522 Polysaccharide deacetylase 30 143 1.0E-28 T 22-04-2016 IPR002509 NodB homology domain GO:0005975|GO:0016810 SRM_RS10685 91e1bd328078528686a95570bb1c0d66 215 SUPERFAMILY SSF88713 22 212 7.91E-53 T 22-04-2016 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 SRM_RS07180 081f08190dce333dc9c49357c5116e42 134 PANTHER PTHR30007 5 113 6.2E-32 T 22-04-2016 SRM_RS07180 081f08190dce333dc9c49357c5116e42 134 PANTHER PTHR30007:SF18 5 113 6.2E-32 T 22-04-2016 SRM_RS07180 081f08190dce333dc9c49357c5116e42 134 Pfam PF13340 Putative transposase of IS4/5 family (DUF4096) 8 79 2.5E-28 T 22-04-2016 IPR025161 Putative transposase IS4/IS5 family SRM_RS11230 cf931b5abaaee38c82ae0f1897270766 237 Gene3D G3DSA:3.30.1150.10 126 237 1.1E-10 T 22-04-2016 SRM_RS11230 cf931b5abaaee38c82ae0f1897270766 237 Pfam PF03544 Gram-negative bacterial TonB protein C-terminal 171 236 3.7E-7 T 22-04-2016 IPR006260 TonB, C-terminal GO:0006810 SRM_RS11230 cf931b5abaaee38c82ae0f1897270766 237 SUPERFAMILY SSF74653 127 237 1.01E-10 T 22-04-2016 SRM_RS11230 cf931b5abaaee38c82ae0f1897270766 237 TIGRFAM TIGR01352 tonB_Cterm: TonB family C-terminal domain 166 236 2.0E-11 T 22-04-2016 IPR006260 TonB, C-terminal GO:0006810 SRM_RS04395 a0b6cbc6d1d887e9f704f6e4cd3de6e7 377 Pfam PF01385 Probable transposase 161 274 1.5E-25 T 22-04-2016 IPR001959 Probable transposase, IS891/IS1136/IS1341 SRM_RS04395 a0b6cbc6d1d887e9f704f6e4cd3de6e7 377 PANTHER PTHR30405 1 358 5.0E-76 T 22-04-2016 SRM_RS04395 a0b6cbc6d1d887e9f704f6e4cd3de6e7 377 PANTHER PTHR30405:SF4 1 358 5.0E-76 T 22-04-2016 SRM_RS04395 a0b6cbc6d1d887e9f704f6e4cd3de6e7 377 Pfam PF07282 Putative transposase DNA-binding domain 285 355 1.5E-20 T 22-04-2016 IPR010095 Transposase IS605, OrfB, C-terminal SRM_RS15115 2396b891b355057f9a2bc766a005a365 800 PANTHER PTHR30069 66 293 1.6E-38 T 22-04-2016 SRM_RS15115 2396b891b355057f9a2bc766a005a365 800 Pfam PF13715 CarboxypepD_reg-like domain 65 151 2.6E-24 T 22-04-2016 SRM_RS15115 2396b891b355057f9a2bc766a005a365 800 Pfam PF07715 TonB-dependent Receptor Plug Domain 183 258 4.3E-10 T 22-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 SRM_RS15115 2396b891b355057f9a2bc766a005a365 800 Gene3D G3DSA:2.40.170.20 303 797 1.9E-34 T 22-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 SRM_RS15115 2396b891b355057f9a2bc766a005a365 800 SUPERFAMILY SSF56935 147 784 9.46E-67 T 22-04-2016 SRM_RS15115 2396b891b355057f9a2bc766a005a365 800 Pfam PF00593 TonB dependent receptor 508 798 6.7E-10 T 22-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 SRM_RS15115 2396b891b355057f9a2bc766a005a365 800 Gene3D G3DSA:2.60.40.1120 64 141 2.2E-20 T 22-04-2016 IPR014766 Carboxypeptidase, regulatory domain SRM_RS15115 2396b891b355057f9a2bc766a005a365 800 PANTHER PTHR30069:SF1 66 293 1.6E-38 T 22-04-2016 SRM_RS15115 2396b891b355057f9a2bc766a005a365 800 Gene3D G3DSA:2.170.130.10 148 265 2.5E-9 T 22-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 SRM_RS15115 2396b891b355057f9a2bc766a005a365 800 SUPERFAMILY SSF49464 64 149 3.53E-18 T 22-04-2016 IPR008969 Carboxypeptidase-like, regulatory domain SRM_RS04090 6ddc91754c193468d3ceaa3cb6f43d0b 68 ProDom PD030562 SUPPRESSOR HTRA PROTEASE TRANSCRIPTIONAL REGULATOR HTAR SOHA ABRB YDCA BLL1688 4 44 1.0E-5 T 22-04-2016 SRM_RS04090 6ddc91754c193468d3ceaa3cb6f43d0b 68 Pfam PF15937 prlF antitoxin for toxin YhaV_toxin 4 46 4.3E-9 T 22-04-2016 IPR031848 PrlF antitoxin GO:0001558|GO:0003700|GO:0097351 SRM_RS04090 6ddc91754c193468d3ceaa3cb6f43d0b 68 Gene3D G3DSA:2.10.260.10 5 43 6.4E-10 T 22-04-2016 SRM_RS04090 6ddc91754c193468d3ceaa3cb6f43d0b 68 SMART SM00966 4 49 1.2E-9 T 22-04-2016 IPR007159 SpoVT-AbrB domain GO:0003677 SRM_RS04090 6ddc91754c193468d3ceaa3cb6f43d0b 68 SUPERFAMILY SSF89447 2 44 6.63E-12 T 22-04-2016 SRM_RS04090 6ddc91754c193468d3ceaa3cb6f43d0b 68 TIGRFAM TIGR01439 lp_hng_hel_AbrB: transcriptional regulator, AbrB family 4 44 5.2E-13 T 22-04-2016 IPR007159 SpoVT-AbrB domain GO:0003677 SRM_RS15055 196aa865e8954e9702192b3134582199 379 Pfam PF06580 Histidine kinase 184 262 2.8E-24 T 22-04-2016 IPR010559 Signal transduction histidine kinase, internal region GO:0000155|GO:0000160|GO:0016021 SRM_RS15055 196aa865e8954e9702192b3134582199 379 PANTHER PTHR34220 138 376 2.5E-53 T 22-04-2016 SRM_RS15055 196aa865e8954e9702192b3134582199 379 Gene3D G3DSA:3.30.565.10 238 370 4.3E-7 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SRM_RS15055 196aa865e8954e9702192b3134582199 379 SUPERFAMILY SSF55874 239 346 1.31E-9 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SRM_RS02990 296092e7842acb3a09bf9f4a0fafdd3c 377 PANTHER PTHR34220:SF3 158 364 1.2E-57 T 22-04-2016 SRM_RS02990 296092e7842acb3a09bf9f4a0fafdd3c 377 Gene3D G3DSA:3.30.565.10 223 312 1.1E-6 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SRM_RS02990 296092e7842acb3a09bf9f4a0fafdd3c 377 Pfam PF06580 Histidine kinase 173 252 1.2E-25 T 22-04-2016 IPR010559 Signal transduction histidine kinase, internal region GO:0000155|GO:0000160|GO:0016021 SRM_RS02990 296092e7842acb3a09bf9f4a0fafdd3c 377 PANTHER PTHR34220 158 364 1.2E-57 T 22-04-2016 SRM_RS02990 296092e7842acb3a09bf9f4a0fafdd3c 377 SUPERFAMILY SSF55874 228 357 9.41E-10 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SRM_RS14210 d341b322704cb02e34c2534cb6359324 2597 TIGRFAM TIGR04189 surface_SprA: cell surface protein SprA 131 2593 0.0 T 22-04-2016 IPR026377 Cell surface SprA SRM_RS14210 d341b322704cb02e34c2534cb6359324 2597 Pfam PF14349 Motility related/secretion protein 1201 1720 1.1E-85 T 22-04-2016 IPR025684 Gliding motility protein SprA N-terminal domain SRM_RS14210 d341b322704cb02e34c2534cb6359324 2597 Pfam PF14349 Motility related/secretion protein 223 418 1.2E-14 T 22-04-2016 IPR025684 Gliding motility protein SprA N-terminal domain SRM_RS13255 3825d8b49ed85258c69d209dad6da7da 330 PANTHER PTHR35457 1 318 2.1E-32 T 22-04-2016 SRM_RS13255 3825d8b49ed85258c69d209dad6da7da 330 Pfam PF02628 Cytochrome oxidase assembly protein 16 202 1.8E-15 T 22-04-2016 IPR003780 COX15/CtaA family GO:0006784|GO:0016021|GO:0016627|GO:0055114 UniPathway: UPA00269 SRM_RS13255 3825d8b49ed85258c69d209dad6da7da 330 PANTHER PTHR35457:SF1 1 318 2.1E-32 T 22-04-2016 SRM_RS02525 fa5f206c0e23ce52e735d8edea4efac7 306 Pfam PF07849 Protein of unknown function (DUF1641) 270 301 9.1E-13 T 22-04-2016 IPR012440 Protein of unknown function DUF1641 SRM_RS02525 fa5f206c0e23ce52e735d8edea4efac7 306 PANTHER PTHR39180 51 306 1.2E-18 T 22-04-2016 SRM_RS08185 07a1d74ee857fd5a544001cc156d5a9a 256 SUPERFAMILY SSF52540 3 234 1.45E-42 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SRM_RS08185 07a1d74ee857fd5a544001cc156d5a9a 256 Pfam PF00005 ABC transporter 21 176 1.3E-22 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 SRM_RS08185 07a1d74ee857fd5a544001cc156d5a9a 256 PANTHER PTHR24220:SF85 5 252 7.0E-119 T 22-04-2016 SRM_RS08185 07a1d74ee857fd5a544001cc156d5a9a 256 SMART SM00382 30 229 3.8E-7 T 22-04-2016 IPR003593 AAA+ ATPase domain SRM_RS08185 07a1d74ee857fd5a544001cc156d5a9a 256 TIGRFAM TIGR01978 sufC: FeS assembly ATPase SufC 4 248 1.8E-106 T 22-04-2016 IPR010230 FeS cluster assembly SUF system, ATPase SufC GO:0005524|GO:0006810 SRM_RS08185 07a1d74ee857fd5a544001cc156d5a9a 256 PANTHER PTHR24220 5 252 7.0E-119 T 22-04-2016 SRM_RS08185 07a1d74ee857fd5a544001cc156d5a9a 256 Gene3D G3DSA:3.40.50.300 3 236 1.9E-46 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SRM_RS09280 ad55f890f78dbd0d08d234b0410a4631 263 Pfam PF14125 Domain of unknown function (DUF4292) 58 259 2.3E-42 T 22-04-2016 IPR025634 Protein of unknown function DUF4292 SRM_RS09280 ad55f890f78dbd0d08d234b0410a4631 263 Gene3D G3DSA:2.50.20.10 19 235 1.4E-6 T 22-04-2016 SRM_RS15955 4a58dfbf89dc215f9e9c3ed5447a5119 62 Pfam PF09722 Protein of unknown function (DUF2384) 10 59 1.2E-11 T 22-04-2016 IPR024467 Domain of unknown function DUF2384 SRM_RS04630 062f30d87978b12f3ac94512706779d2 362 SUPERFAMILY SSF56014 261 359 2.29E-11 T 22-04-2016 SRM_RS04630 062f30d87978b12f3ac94512706779d2 362 Pfam PF04551 GcpE protein 9 351 4.3E-133 T 22-04-2016 IPR004588 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial-type GO:0016114|GO:0046429|GO:0055114 KEGG: 00900+1.17.7.3|UniPathway: UPA00056 SRM_RS04630 062f30d87978b12f3ac94512706779d2 362 Gene3D G3DSA:3.20.20.70 35 139 1.2E-7 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 SRM_RS04630 062f30d87978b12f3ac94512706779d2 362 PIRSF PIRSF004640 1 360 6.9E-141 T 22-04-2016 IPR016425 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial GO:0005506|GO:0008299|GO:0046429|GO:0055114 KEGG: 00900+1.17.7.3|UniPathway: UPA00056 SRM_RS04630 062f30d87978b12f3ac94512706779d2 362 SUPERFAMILY SSF51717 33 204 5.26E-13 T 22-04-2016 IPR011005 Dihydropteroate synthase-like GO:0044237 SRM_RS04630 062f30d87978b12f3ac94512706779d2 362 Hamap MF_00159 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (ferredoxin) [ispG]. 3 355 33.175 T 22-04-2016 IPR004588 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial-type GO:0016114|GO:0046429|GO:0055114 KEGG: 00900+1.17.7.3|UniPathway: UPA00056 SRM_RS04630 062f30d87978b12f3ac94512706779d2 362 PANTHER PTHR30454 5 358 4.6E-176 T 22-04-2016 SRM_RS04630 062f30d87978b12f3ac94512706779d2 362 TIGRFAM TIGR00612 ispG_gcpE: 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase 5 350 2.5E-125 T 22-04-2016 IPR004588 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial-type GO:0016114|GO:0046429|GO:0055114 KEGG: 00900+1.17.7.3|UniPathway: UPA00056 SRM_RS03580 3ecad0b6e37823bf7df769d95c7dea49 262 PANTHER PTHR10000 155 258 2.4E-16 T 22-04-2016 SRM_RS03580 3ecad0b6e37823bf7df769d95c7dea49 262 Gene3D G3DSA:3.40.50.1000 20 95 5.2E-30 T 22-04-2016 IPR023214 HAD-like domain SRM_RS03580 3ecad0b6e37823bf7df769d95c7dea49 262 Gene3D G3DSA:3.40.50.1000 175 254 5.2E-30 T 22-04-2016 IPR023214 HAD-like domain SRM_RS03580 3ecad0b6e37823bf7df769d95c7dea49 262 SUPERFAMILY SSF56784 20 258 7.24E-29 T 22-04-2016 IPR023214 HAD-like domain SRM_RS03580 3ecad0b6e37823bf7df769d95c7dea49 262 Pfam PF08282 haloacid dehalogenase-like hydrolase 143 252 1.0E-15 T 22-04-2016 IPR023214 HAD-like domain SRM_RS12740 a9768cc5889346f53bf9333e83138595 254 PRINTS PR01438 Universal stress protein signature 216 238 2.1E-5 T 22-04-2016 IPR006015 Universal stress protein A SRM_RS12740 a9768cc5889346f53bf9333e83138595 254 PRINTS PR01438 Universal stress protein signature 199 211 2.1E-5 T 22-04-2016 IPR006015 Universal stress protein A SRM_RS12740 a9768cc5889346f53bf9333e83138595 254 PRINTS PR01438 Universal stress protein signature 113 131 2.1E-5 T 22-04-2016 IPR006015 Universal stress protein A SRM_RS12740 a9768cc5889346f53bf9333e83138595 254 SUPERFAMILY SSF52402 113 240 1.17E-13 T 22-04-2016 SRM_RS12740 a9768cc5889346f53bf9333e83138595 254 Gene3D G3DSA:3.40.50.620 110 238 1.4E-15 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold SRM_RS12740 a9768cc5889346f53bf9333e83138595 254 Gene3D G3DSA:3.40.50.620 46 106 6.4E-4 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold SRM_RS12740 a9768cc5889346f53bf9333e83138595 254 Pfam PF00582 Universal stress protein family 114 238 2.9E-8 T 22-04-2016 IPR006016 UspA GO:0006950 SRM_RS03045 ae714963abc1cb0aad87189237b858c8 144 Pfam PF07681 DoxX 12 95 2.8E-10 T 22-04-2016 IPR032808 DoxX family SRM_RS08285 e798340b4ca763e5a3fafcce9aff1525 498 PANTHER PTHR30203 48 498 1.6E-34 T 22-04-2016 SRM_RS08285 e798340b4ca763e5a3fafcce9aff1525 498 Pfam PF02321 Outer membrane efflux protein 300 474 1.9E-20 T 22-04-2016 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 SRM_RS08285 e798340b4ca763e5a3fafcce9aff1525 498 Pfam PF02321 Outer membrane efflux protein 50 270 5.0E-13 T 22-04-2016 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 SRM_RS08285 e798340b4ca763e5a3fafcce9aff1525 498 SUPERFAMILY SSF56954 2 101 1.31E-55 T 22-04-2016 SRM_RS08285 e798340b4ca763e5a3fafcce9aff1525 498 SUPERFAMILY SSF56954 131 480 1.31E-55 T 22-04-2016 SRM_RS08285 e798340b4ca763e5a3fafcce9aff1525 498 Gene3D G3DSA:1.20.1600.10 48 480 2.8E-43 T 22-04-2016 SRM_RS08565 6903b958d94ec430c1022b8828770370 483 SUPERFAMILY SSF56935 141 483 2.2E-11 T 22-04-2016 SRM_RS11075 5364fc2bdf59461cb091f3cf332e2df5 226 Hamap MF_00457 UPF0173 metal-dependent hydrolase . 1 226 31.694 T 22-04-2016 IPR022877 Protein of unknown funcion UPF0173 SRM_RS11075 5364fc2bdf59461cb091f3cf332e2df5 226 Gene3D G3DSA:3.60.15.10 1 223 1.1E-46 T 22-04-2016 IPR001279 Metallo-beta-lactamase SRM_RS11075 5364fc2bdf59461cb091f3cf332e2df5 226 Pfam PF13483 Beta-lactamase superfamily domain 3 190 7.8E-25 T 22-04-2016 SRM_RS11075 5364fc2bdf59461cb091f3cf332e2df5 226 SUPERFAMILY SSF56281 1 219 6.16E-30 T 22-04-2016 IPR001279 Metallo-beta-lactamase SRM_RS11075 5364fc2bdf59461cb091f3cf332e2df5 226 PANTHER PTHR15032:SF12 1 222 2.3E-43 T 22-04-2016 SRM_RS11075 5364fc2bdf59461cb091f3cf332e2df5 226 SMART SM00849 7 190 2.8E-6 T 22-04-2016 IPR001279 Metallo-beta-lactamase SRM_RS11075 5364fc2bdf59461cb091f3cf332e2df5 226 PANTHER PTHR15032 1 222 2.3E-43 T 22-04-2016 SRM_RS02595 929d663d512afa8e1ff6ee6abcee483b 237 Pfam PF03070 TENA/THI-4/PQQC family 24 231 7.0E-34 T 22-04-2016 IPR004305 Thiaminase-2/PQQC SRM_RS02595 929d663d512afa8e1ff6ee6abcee483b 237 Gene3D G3DSA:1.20.910.10 16 236 1.1E-61 T 22-04-2016 IPR016084 Haem oxygenase-like, multi-helical Reactome: REACT_9431 SRM_RS02595 929d663d512afa8e1ff6ee6abcee483b 237 SUPERFAMILY SSF48613 13 230 3.42E-61 T 22-04-2016 IPR016084 Haem oxygenase-like, multi-helical Reactome: REACT_9431 SRM_RS02595 929d663d512afa8e1ff6ee6abcee483b 237 PANTHER PTHR20858 25 196 1.2E-40 T 22-04-2016 SRM_RS02595 929d663d512afa8e1ff6ee6abcee483b 237 TIGRFAM TIGR04306 salvage_TenA: thiaminase II 26 231 3.6E-40 T 22-04-2016 IPR027574 Thiaminase II GO:0006772|GO:0050334 KEGG: 00730+3.5.99.2|MetaCyc: PWY-6899|MetaCyc: PWY-7356|UniPathway: UPA00060 SRM_RS03905 17b8a0fde81a4d90178172064c129875 353 Gene3D G3DSA:3.40.50.720 3 190 3.7E-66 T 22-04-2016 IPR016040 NAD(P)-binding domain SRM_RS03905 17b8a0fde81a4d90178172064c129875 353 Pfam PF16363 GDP-mannose 4,6 dehydratase 6 326 2.0E-97 T 22-04-2016 IPR016040 NAD(P)-binding domain SRM_RS03905 17b8a0fde81a4d90178172064c129875 353 PANTHER PTHR10366:SF41 4 353 8.7E-166 T 22-04-2016 IPR005888 dTDP-glucose 4,6-dehydratase GO:0008460|GO:0009225 KEGG: 00521+4.2.1.46|KEGG: 00523+4.2.1.46|MetaCyc: PWY-3221|MetaCyc: PWY-6808|MetaCyc: PWY-6942|MetaCyc: PWY-6953|MetaCyc: PWY-6973|MetaCyc: PWY-6974|MetaCyc: PWY-6976|MetaCyc: PWY-7104|MetaCyc: PWY-7301|MetaCyc: PWY-7312|MetaCyc: PWY-7315|MetaCyc: PWY-7316|MetaCyc: PWY-7318|MetaCyc: PWY-7413|MetaCyc: PWY-7414|MetaCyc: PWY-7440|MetaCyc: PWY-7657|MetaCyc: PWY-7688 SRM_RS03905 17b8a0fde81a4d90178172064c129875 353 PANTHER PTHR10366 4 353 8.7E-166 T 22-04-2016 SRM_RS03905 17b8a0fde81a4d90178172064c129875 353 TIGRFAM TIGR01181 dTDP_gluc_dehyt: dTDP-glucose 4,6-dehydratase 5 339 8.6E-147 T 22-04-2016 IPR005888 dTDP-glucose 4,6-dehydratase GO:0008460|GO:0009225 KEGG: 00521+4.2.1.46|KEGG: 00523+4.2.1.46|MetaCyc: PWY-3221|MetaCyc: PWY-6808|MetaCyc: PWY-6942|MetaCyc: PWY-6953|MetaCyc: PWY-6973|MetaCyc: PWY-6974|MetaCyc: PWY-6976|MetaCyc: PWY-7104|MetaCyc: PWY-7301|MetaCyc: PWY-7312|MetaCyc: PWY-7315|MetaCyc: PWY-7316|MetaCyc: PWY-7318|MetaCyc: PWY-7413|MetaCyc: PWY-7414|MetaCyc: PWY-7440|MetaCyc: PWY-7657|MetaCyc: PWY-7688 SRM_RS03905 17b8a0fde81a4d90178172064c129875 353 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 145 173 - T 22-04-2016 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 SRM_RS03905 17b8a0fde81a4d90178172064c129875 353 Gene3D G3DSA:3.90.25.10 191 339 4.2E-53 T 22-04-2016 SRM_RS03905 17b8a0fde81a4d90178172064c129875 353 SUPERFAMILY SSF51735 1 337 5.63E-93 T 22-04-2016 IPR016040 NAD(P)-binding domain SRM_RS08515 9d00a85d020870a5bd06848d45d7397d 672 Gene3D G3DSA:2.60.40.10 22 109 1.7E-10 T 22-04-2016 IPR013783 Immunoglobulin-like fold SRM_RS14555 0c01e34067183122d5ddd1894c907f24 253 SUPERFAMILY SSF55874 93 252 5.37E-27 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SRM_RS14555 0c01e34067183122d5ddd1894c907f24 253 SMART SM00387 148 253 1.7E-14 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SRM_RS14555 0c01e34067183122d5ddd1894c907f24 253 Gene3D G3DSA:3.30.565.10 109 252 3.1E-25 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SRM_RS14555 0c01e34067183122d5ddd1894c907f24 253 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 149 252 3.6E-10 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SRM_RS14555 0c01e34067183122d5ddd1894c907f24 253 PRINTS PR00344 Bacterial sensor protein C-terminal signature 241 253 7.0E-6 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SRM_RS14555 0c01e34067183122d5ddd1894c907f24 253 PRINTS PR00344 Bacterial sensor protein C-terminal signature 215 233 7.0E-6 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SRM_RS14555 0c01e34067183122d5ddd1894c907f24 253 PRINTS PR00344 Bacterial sensor protein C-terminal signature 204 214 7.0E-6 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SRM_RS14555 0c01e34067183122d5ddd1894c907f24 253 PANTHER PTHR24423 60 253 1.6E-31 T 22-04-2016 SRM_RS14310 36373e528a659a87752bfa188ccfa4d7 291 PANTHER PTHR33608 1 290 1.4E-78 T 22-04-2016 SRM_RS14310 36373e528a659a87752bfa188ccfa4d7 291 SUPERFAMILY SSF53300 73 189 9.58E-16 T 22-04-2016 IPR002035 von Willebrand factor, type A SRM_RS14310 36373e528a659a87752bfa188ccfa4d7 291 Pfam PF01882 Protein of unknown function DUF58 37 122 2.1E-25 T 22-04-2016 IPR002881 Domain of unknown function DUF58 SRM_RS14310 36373e528a659a87752bfa188ccfa4d7 291 PANTHER PTHR33608:SF5 1 290 1.4E-78 T 22-04-2016 SRM_RS11160 c10a0686c8cecdd6c5fb0e8569301952 323 Pfam PF13349 Putative adhesin 158 271 9.5E-8 T 22-04-2016 IPR025164 Putative adhesin SRM_RS05265 4b547d3d8dc583e0b760a0699580ec43 348 Pfam PF07396 Phosphate-selective porin O and P 58 253 2.2E-12 T 22-04-2016 IPR010870 Phosphate-selective porin O/P SRM_RS05265 4b547d3d8dc583e0b760a0699580ec43 348 SUPERFAMILY SSF56935 42 339 2.75E-11 T 22-04-2016 SRM_RS05265 4b547d3d8dc583e0b760a0699580ec43 348 Gene3D G3DSA:2.40.160.10 45 257 2.8E-30 T 22-04-2016 IPR023614 Porin domain SRM_RS04335 d18ce2558b36210e8c48b1190c37efcd 94 Gene3D G3DSA:1.10.260.40 1 91 4.8E-28 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 SRM_RS04335 d18ce2558b36210e8c48b1190c37efcd 94 Pfam PF01381 Helix-turn-helix 18 53 3.5E-6 T 22-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 SRM_RS04335 d18ce2558b36210e8c48b1190c37efcd 94 SUPERFAMILY SSF47413 8 90 2.02E-19 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 SRM_RS04335 d18ce2558b36210e8c48b1190c37efcd 94 PANTHER PTHR36924:SF2 1 90 1.9E-17 T 22-04-2016 SRM_RS04335 d18ce2558b36210e8c48b1190c37efcd 94 TIGRFAM TIGR02607 antidote_HigA: addiction module antidote protein, HigA family 3 82 1.5E-23 T 22-04-2016 IPR013430 Toxin-antitoxin system, antidote protein, HigA GO:0003677 SRM_RS04335 d18ce2558b36210e8c48b1190c37efcd 94 PANTHER PTHR36924 1 90 1.9E-17 T 22-04-2016 SRM_RS05110 04f0332e97d03e7f818e98fd4e010549 199 PANTHER PTHR19278 47 186 6.4E-16 T 22-04-2016 SRM_RS05110 04f0332e97d03e7f818e98fd4e010549 199 Gene3D G3DSA:3.40.50.2020 46 187 4.0E-24 T 22-04-2016 IPR029057 Phosphoribosyltransferase-like SRM_RS05110 04f0332e97d03e7f818e98fd4e010549 199 SUPERFAMILY SSF53271 41 187 2.13E-22 T 22-04-2016 IPR029057 Phosphoribosyltransferase-like SRM_RS05110 04f0332e97d03e7f818e98fd4e010549 199 PANTHER PTHR19278:SF9 47 186 6.4E-16 T 22-04-2016 SRM_RS01575 2bafd0332d91dc4dae83a040e8de7963 542 SUPERFAMILY SSF53795 370 427 5.49E-10 T 22-04-2016 SRM_RS01575 2bafd0332d91dc4dae83a040e8de7963 542 Gene3D G3DSA:3.40.50.300 369 422 3.0E-11 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SRM_RS02785 6939745646914d98ffe065aeba0720ec 517 PANTHER PTHR11819 3 503 1.2E-86 T 22-04-2016 IPR001734 Sodium/solute symporter GO:0005215|GO:0006810|GO:0016020|GO:0055085 SRM_RS02785 6939745646914d98ffe065aeba0720ec 517 Pfam PF00474 Sodium:solute symporter family 34 435 1.4E-30 T 22-04-2016 IPR001734 Sodium/solute symporter GO:0005215|GO:0006810|GO:0016020|GO:0055085 SRM_RS07155 f5bc0971ceee1f7662db9a89412e91f3 383 PANTHER PTHR11601:SF31 1 378 4.0E-78 T 22-04-2016 SRM_RS07155 f5bc0971ceee1f7662db9a89412e91f3 383 SUPERFAMILY SSF53383 6 379 4.79E-80 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase SRM_RS07155 f5bc0971ceee1f7662db9a89412e91f3 383 Pfam PF00266 Aminotransferase class-V 21 332 4.0E-47 T 22-04-2016 IPR000192 Aminotransferase class V domain SRM_RS07155 f5bc0971ceee1f7662db9a89412e91f3 383 Gene3D G3DSA:3.90.1150.10 277 378 8.9E-8 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 SRM_RS07155 f5bc0971ceee1f7662db9a89412e91f3 383 Gene3D G3DSA:3.40.640.10 32 276 3.8E-60 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 SRM_RS07155 f5bc0971ceee1f7662db9a89412e91f3 383 ProSitePatterns PS00595 Aminotransferases class-V pyridoxal-phosphate attachment site. 206 226 - T 22-04-2016 IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site SRM_RS07155 f5bc0971ceee1f7662db9a89412e91f3 383 PANTHER PTHR11601 1 378 4.0E-78 T 22-04-2016 SRM_RS15800 4dcf5cc5007f0a246b3f30a13e6966dd 322 Gene3D G3DSA:3.10.180.10 150 321 9.3E-39 T 22-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase SRM_RS15800 4dcf5cc5007f0a246b3f30a13e6966dd 322 Gene3D G3DSA:3.10.180.10 4 146 1.6E-29 T 22-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase SRM_RS15800 4dcf5cc5007f0a246b3f30a13e6966dd 322 PANTHER PTHR36110 5 322 4.6E-99 T 22-04-2016 SRM_RS15800 4dcf5cc5007f0a246b3f30a13e6966dd 322 PANTHER PTHR36110:SF2 5 322 4.6E-99 T 22-04-2016 SRM_RS15800 4dcf5cc5007f0a246b3f30a13e6966dd 322 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 182 280 2.3E-12 T 22-04-2016 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain SRM_RS15800 4dcf5cc5007f0a246b3f30a13e6966dd 322 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 7 136 1.1E-13 T 22-04-2016 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain SRM_RS15800 4dcf5cc5007f0a246b3f30a13e6966dd 322 SUPERFAMILY SSF54593 5 311 7.49E-43 T 22-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase SRM_RS02455 d55a39aa13da78ef6617b97b3e5ea17e 694 PANTHER PTHR22888:SF3 418 694 3.2E-16 T 22-04-2016 SRM_RS02455 d55a39aa13da78ef6617b97b3e5ea17e 694 SUPERFAMILY SSF49503 596 693 5.82E-26 T 22-04-2016 IPR008972 Cupredoxin SRM_RS02455 d55a39aa13da78ef6617b97b3e5ea17e 694 SUPERFAMILY SSF50974 112 569 5.36E-89 T 22-04-2016 IPR011045 Nitrous oxide reductase, N-terminal SRM_RS02455 d55a39aa13da78ef6617b97b3e5ea17e 694 Pfam PF13473 Cupredoxin-like domain 598 687 1.9E-11 T 22-04-2016 IPR028096 EfeO-type cupredoxin-like domain SRM_RS02455 d55a39aa13da78ef6617b97b3e5ea17e 694 TIGRFAM TIGR04246 nitrous_NosZ_Gp: nitrous-oxide reductase, Sec-dependent 110 693 4.3E-242 T 22-04-2016 IPR026468 Nitrous-oxide reductase, Sec-dependent SRM_RS02455 d55a39aa13da78ef6617b97b3e5ea17e 694 Gene3D G3DSA:2.130.10.10 169 578 4.5E-119 T 22-04-2016 IPR015943 WD40/YVTN repeat-like-containing domain GO:0005515 SRM_RS02455 d55a39aa13da78ef6617b97b3e5ea17e 694 PANTHER PTHR22888 418 694 3.2E-16 T 22-04-2016 SRM_RS02455 d55a39aa13da78ef6617b97b3e5ea17e 694 Gene3D G3DSA:2.60.40.420 579 691 9.3E-37 T 22-04-2016 IPR008972 Cupredoxin SRM_RS08530 4cc04654e208206e8cc02e75f77e074a 208 Pfam PF00857 Isochorismatase family 3 200 1.5E-36 T 22-04-2016 IPR000868 Isochorismatase-like GO:0003824|GO:0008152 SRM_RS08530 4cc04654e208206e8cc02e75f77e074a 208 Gene3D G3DSA:3.40.50.850 2 203 8.1E-73 T 22-04-2016 IPR000868 Isochorismatase-like GO:0003824|GO:0008152 SRM_RS08530 4cc04654e208206e8cc02e75f77e074a 208 PANTHER PTHR11080:SF2 3 205 1.1E-73 T 22-04-2016 SRM_RS08530 4cc04654e208206e8cc02e75f77e074a 208 PANTHER PTHR11080 3 205 1.1E-73 T 22-04-2016 SRM_RS08530 4cc04654e208206e8cc02e75f77e074a 208 SUPERFAMILY SSF52499 3 204 9.03E-55 T 22-04-2016 IPR000868 Isochorismatase-like GO:0003824|GO:0008152 SRM_RS10280 61c5e5e5cf4f41f43d4fe2d980ccb3c5 473 SMART SM00919 242 464 3.0E-114 T 22-04-2016 IPR012302 Malic enzyme, NAD-binding GO:0004471|GO:0051287|GO:0055114 SRM_RS10280 61c5e5e5cf4f41f43d4fe2d980ccb3c5 473 Pfam PF03949 Malic enzyme, NAD binding domain 244 463 3.9E-24 T 22-04-2016 IPR012302 Malic enzyme, NAD-binding GO:0004471|GO:0051287|GO:0055114 SRM_RS10280 61c5e5e5cf4f41f43d4fe2d980ccb3c5 473 SUPERFAMILY SSF55021 15 87 1.2E-11 T 22-04-2016 SRM_RS10280 61c5e5e5cf4f41f43d4fe2d980ccb3c5 473 SUPERFAMILY SSF51735 242 471 1.39E-74 T 22-04-2016 IPR016040 NAD(P)-binding domain SRM_RS10280 61c5e5e5cf4f41f43d4fe2d980ccb3c5 473 Pfam PF00390 Malic enzyme, N-terminal domain 99 230 1.3E-26 T 22-04-2016 IPR012301 Malic enzyme, N-terminal domain GO:0004471|GO:0055114 SRM_RS10280 61c5e5e5cf4f41f43d4fe2d980ccb3c5 473 PANTHER PTHR23406 1 470 8.2E-168 T 22-04-2016 SRM_RS10280 61c5e5e5cf4f41f43d4fe2d980ccb3c5 473 Gene3D G3DSA:3.40.50.720 240 471 3.1E-76 T 22-04-2016 IPR016040 NAD(P)-binding domain SRM_RS10280 61c5e5e5cf4f41f43d4fe2d980ccb3c5 473 PANTHER PTHR23406:SF23 1 470 8.2E-168 T 22-04-2016 SRM_RS10280 61c5e5e5cf4f41f43d4fe2d980ccb3c5 473 PIRSF PIRSF000106 37 473 3.0E-82 T 22-04-2016 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471|GO:0006108|GO:0055114 SRM_RS10280 61c5e5e5cf4f41f43d4fe2d980ccb3c5 473 SMART SM01274 97 230 2.3E-76 T 22-04-2016 IPR012301 Malic enzyme, N-terminal domain GO:0004471|GO:0055114 SRM_RS10280 61c5e5e5cf4f41f43d4fe2d980ccb3c5 473 Gene3D G3DSA:3.30.70.260 14 85 3.6E-15 T 22-04-2016 SRM_RS10280 61c5e5e5cf4f41f43d4fe2d980ccb3c5 473 Pfam PF13291 ACT domain 15 85 3.7E-10 T 22-04-2016 IPR002912 ACT domain GO:0008152|GO:0016597 SRM_RS10280 61c5e5e5cf4f41f43d4fe2d980ccb3c5 473 ProSitePatterns PS00331 Malic enzymes signature. 238 254 - T 22-04-2016 IPR015884 Malic enzyme, conserved site GO:0004471|GO:0055114 SRM_RS10280 61c5e5e5cf4f41f43d4fe2d980ccb3c5 473 SUPERFAMILY SSF53223 91 240 1.87E-53 T 22-04-2016 SRM_RS10280 61c5e5e5cf4f41f43d4fe2d980ccb3c5 473 Gene3D G3DSA:3.40.50.10380 97 239 6.4E-51 T 22-04-2016 IPR012301 Malic enzyme, N-terminal domain GO:0004471|GO:0055114 SRM_RS04120 7adc8391e3aba8885dc47dd38a05bfcb 285 Pfam PF08843 Nucleotidyl transferase AbiEii toxin, Type IV TA system 24 215 4.7E-8 T 22-04-2016 IPR014942 Nucleotidyl transferase AbiEii toxin, Type IV TA system SRM_RS04120 7adc8391e3aba8885dc47dd38a05bfcb 285 SUPERFAMILY SSF81301 16 168 8.18E-5 T 22-04-2016 SRM_RS08375 42b7a5487f22a3515c934c2bcdac929a 105 Pfam PF06305 Protein of unknown function (DUF1049) 21 78 1.4E-16 T 22-04-2016 IPR010445 Lipopolysaccharide assembly protein A domain GO:0005887 SRM_RS08375 42b7a5487f22a3515c934c2bcdac929a 105 PANTHER PTHR41335 1 77 2.2E-13 T 22-04-2016 SRM_RS07490 fc827753ab6a462537221012df77fa27 241 PANTHER PTHR30294:SF5 1 220 6.2E-47 T 22-04-2016 SRM_RS07490 fc827753ab6a462537221012df77fa27 241 Pfam PF12679 ABC-2 family transporter protein 65 216 2.4E-14 T 22-04-2016 IPR032688 ABC-2 family transporter protein GO:0006810 SRM_RS07490 fc827753ab6a462537221012df77fa27 241 PANTHER PTHR30294 1 220 6.2E-47 T 22-04-2016 SRM_RS16020 9e4e388b24c27e175d5889ba32f935be 324 SUPERFAMILY SSF102405 136 314 3.21E-55 T 22-04-2016 SRM_RS16020 9e4e388b24c27e175d5889ba32f935be 324 Gene3D G3DSA:3.40.50.450 140 321 1.2E-58 T 22-04-2016 SRM_RS16020 9e4e388b24c27e175d5889ba32f935be 324 Pfam PF03641 Possible lysine decarboxylase 183 312 2.7E-36 T 22-04-2016 IPR031100 LOG family SRM_RS16020 9e4e388b24c27e175d5889ba32f935be 324 TIGRFAM TIGR00730 TIGR00730: TIGR00730 family protein 140 314 1.1E-55 T 22-04-2016 IPR005269 Cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG SRM_RS16020 9e4e388b24c27e175d5889ba32f935be 324 PANTHER PTHR31223 138 319 1.1E-68 T 22-04-2016 SRM_RS16020 9e4e388b24c27e175d5889ba32f935be 324 PANTHER PTHR31223:SF0 138 319 1.1E-68 T 22-04-2016 SRM_RS09490 d4cb81c8fb3281bbeb1f7cf72887af2e 273 PIRSF PIRSF038471 6 271 2.7E-37 T 22-04-2016 IPR007221 Rod shape-determining protein MreC GO:0008360 SRM_RS09490 d4cb81c8fb3281bbeb1f7cf72887af2e 273 PANTHER PTHR34138 44 273 8.3E-42 T 22-04-2016 SRM_RS09490 d4cb81c8fb3281bbeb1f7cf72887af2e 273 Pfam PF04085 rod shape-determining protein MreC 110 256 2.5E-28 T 22-04-2016 IPR007221 Rod shape-determining protein MreC GO:0008360 SRM_RS09490 d4cb81c8fb3281bbeb1f7cf72887af2e 273 PANTHER PTHR34138:SF1 44 273 8.3E-42 T 22-04-2016 SRM_RS12745 7003b58b7fca848fc57bd416c062a2c2 220 SUPERFAMILY SSF51735 9 145 1.81E-29 T 22-04-2016 IPR016040 NAD(P)-binding domain SRM_RS12745 7003b58b7fca848fc57bd416c062a2c2 220 Gene3D G3DSA:3.40.50.720 9 145 7.7E-34 T 22-04-2016 IPR016040 NAD(P)-binding domain SRM_RS12745 7003b58b7fca848fc57bd416c062a2c2 220 Gene3D G3DSA:3.30.70.1450 152 218 5.4E-4 T 22-04-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 SRM_RS12745 7003b58b7fca848fc57bd416c062a2c2 220 Pfam PF02080 TrkA-C domain 153 218 6.4E-8 T 22-04-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 SRM_RS12745 7003b58b7fca848fc57bd416c062a2c2 220 SUPERFAMILY SSF116726 137 218 6.67E-7 T 22-04-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 SRM_RS12745 7003b58b7fca848fc57bd416c062a2c2 220 PANTHER PTHR16254:SF19 9 163 5.3E-47 T 22-04-2016 SRM_RS12745 7003b58b7fca848fc57bd416c062a2c2 220 Pfam PF02254 TrkA-N domain 10 124 3.1E-23 T 22-04-2016 IPR003148 Regulator of K+ conductance, N-terminal GO:0006813 SRM_RS12745 7003b58b7fca848fc57bd416c062a2c2 220 PRINTS PR00335 TrkA potassium uptake protein signature 26 40 3.2E-10 T 22-04-2016 IPR006036 Potassium uptake protein TrkA GO:0005886|GO:0006813|GO:0015079 SRM_RS12745 7003b58b7fca848fc57bd416c062a2c2 220 PRINTS PR00335 TrkA potassium uptake protein signature 80 94 3.2E-10 T 22-04-2016 IPR006036 Potassium uptake protein TrkA GO:0005886|GO:0006813|GO:0015079 SRM_RS12745 7003b58b7fca848fc57bd416c062a2c2 220 PRINTS PR00335 TrkA potassium uptake protein signature 67 77 3.2E-10 T 22-04-2016 IPR006036 Potassium uptake protein TrkA GO:0005886|GO:0006813|GO:0015079 SRM_RS12745 7003b58b7fca848fc57bd416c062a2c2 220 PRINTS PR00335 TrkA potassium uptake protein signature 56 66 3.2E-10 T 22-04-2016 IPR006036 Potassium uptake protein TrkA GO:0005886|GO:0006813|GO:0015079 SRM_RS12745 7003b58b7fca848fc57bd416c062a2c2 220 PRINTS PR00335 TrkA potassium uptake protein signature 9 23 3.2E-10 T 22-04-2016 IPR006036 Potassium uptake protein TrkA GO:0005886|GO:0006813|GO:0015079 SRM_RS12745 7003b58b7fca848fc57bd416c062a2c2 220 PANTHER PTHR16254 9 163 5.3E-47 T 22-04-2016 SRM_RS09255 c9b0be28204881ac9bbb1488baa27af9 315 PANTHER PTHR17490 3 315 7.1E-96 T 22-04-2016 SRM_RS09255 c9b0be28204881ac9bbb1488baa27af9 315 Pfam PF03481 Putative GTP-binding controlling metal-binding 192 314 9.0E-22 T 22-04-2016 IPR005145 Putative GTP-binding controlling metal-binding domain SRM_RS09255 c9b0be28204881ac9bbb1488baa27af9 315 Gene3D G3DSA:3.90.870.10 9 197 3.7E-73 T 22-04-2016 IPR017945 DHBP synthase RibB-like alpha/beta domain SRM_RS09255 c9b0be28204881ac9bbb1488baa27af9 315 SUPERFAMILY SSF55821 9 196 5.8E-62 T 22-04-2016 IPR017945 DHBP synthase RibB-like alpha/beta domain SRM_RS09255 c9b0be28204881ac9bbb1488baa27af9 315 Pfam PF01300 Telomere recombination 15 190 3.5E-56 T 22-04-2016 IPR006070 YrdC-like domain GO:0003725 SRM_RS09255 c9b0be28204881ac9bbb1488baa27af9 315 PIRSF PIRSF004930 2 315 6.3E-110 T 22-04-2016 IPR010923 tRNA threonylcarbamoyladenosine biosynthesis protein SUA5 SRM_RS09255 c9b0be28204881ac9bbb1488baa27af9 315 TIGRFAM TIGR00057 TIGR00057: tRNA threonylcarbamoyl adenosine modification protein, Sua5/YciO/YrdC/YwlC family 11 198 1.6E-60 T 22-04-2016 IPR006070 YrdC-like domain GO:0003725 SRM_RS09255 c9b0be28204881ac9bbb1488baa27af9 315 PANTHER PTHR17490:SF3 3 315 7.1E-96 T 22-04-2016 SRM_RS12120 3aa700ce182eae9930eeb0d76decbabc 400 Pfam PF04773 FecR protein 188 283 1.6E-20 T 22-04-2016 IPR006860 FecR protein SRM_RS12120 3aa700ce182eae9930eeb0d76decbabc 400 PANTHER PTHR30273:SF2 51 392 1.4E-48 T 22-04-2016 SRM_RS12120 3aa700ce182eae9930eeb0d76decbabc 400 PANTHER PTHR30273 51 392 1.4E-48 T 22-04-2016 IPR012373 Fe(2+)-dicitrate sensor, transmembrane component SRM_RS12120 3aa700ce182eae9930eeb0d76decbabc 400 Pfam PF16344 Domain of unknown function (DUF4974) 298 392 2.0E-10 T 22-04-2016 IPR032508 Protein FecR, C-terminal SRM_RS02960 56bf2be6e8ffb7df17d5b90e864718d1 411 PANTHER PTHR16254:SF21 60 346 1.8E-71 T 22-04-2016 SRM_RS02960 56bf2be6e8ffb7df17d5b90e864718d1 411 Pfam PF02080 TrkA-C domain 338 407 3.9E-14 T 22-04-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 SRM_RS02960 56bf2be6e8ffb7df17d5b90e864718d1 411 Pfam PF02254 TrkA-N domain 187 302 1.7E-32 T 22-04-2016 IPR003148 Regulator of K+ conductance, N-terminal GO:0006813 SRM_RS02960 56bf2be6e8ffb7df17d5b90e864718d1 411 Pfam PF07885 Ion channel 93 163 1.5E-13 T 22-04-2016 IPR013099 Potassium channel domain SRM_RS02960 56bf2be6e8ffb7df17d5b90e864718d1 411 SUPERFAMILY SSF51735 183 324 1.65E-38 T 22-04-2016 IPR016040 NAD(P)-binding domain SRM_RS02960 56bf2be6e8ffb7df17d5b90e864718d1 411 PANTHER PTHR16254 60 346 1.8E-71 T 22-04-2016 SRM_RS02960 56bf2be6e8ffb7df17d5b90e864718d1 411 Gene3D G3DSA:3.30.70.1450 335 407 8.2E-19 T 22-04-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 SRM_RS02960 56bf2be6e8ffb7df17d5b90e864718d1 411 Gene3D G3DSA:1.10.287.70 84 159 1.1E-14 T 22-04-2016 SRM_RS02960 56bf2be6e8ffb7df17d5b90e864718d1 411 SUPERFAMILY SSF116726 334 407 2.75E-15 T 22-04-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 SRM_RS02960 56bf2be6e8ffb7df17d5b90e864718d1 411 SUPERFAMILY SSF81324 77 207 3.79E-21 T 22-04-2016 SRM_RS02960 56bf2be6e8ffb7df17d5b90e864718d1 411 Gene3D G3DSA:3.40.50.720 183 324 8.8E-43 T 22-04-2016 IPR016040 NAD(P)-binding domain SRM_RS13785 d563f1535402e1ff2efb7ed5a5262fa4 164 SUPERFAMILY SSF52091 19 138 5.89E-29 T 22-04-2016 IPR002645 STAS domain SRM_RS13785 d563f1535402e1ff2efb7ed5a5262fa4 164 Gene3D G3DSA:3.40.50.10600 22 139 5.1E-31 T 22-04-2016 IPR021866 SpoIIAA-like SRM_RS13785 d563f1535402e1ff2efb7ed5a5262fa4 164 Pfam PF11964 SpoIIAA-like 35 139 5.3E-17 T 22-04-2016 IPR021866 SpoIIAA-like SRM_RS13540 a403e1257ff5854b7d12e44b8cc21303 284 Gene3D G3DSA:1.25.40.10 10 86 3.1E-13 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 SRM_RS13540 a403e1257ff5854b7d12e44b8cc21303 284 Gene3D G3DSA:1.25.40.10 231 268 3.1E-13 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 SRM_RS13540 a403e1257ff5854b7d12e44b8cc21303 284 SUPERFAMILY SSF48452 219 271 8.44E-12 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 SRM_RS13540 a403e1257ff5854b7d12e44b8cc21303 284 SUPERFAMILY SSF48452 11 94 8.44E-12 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 SRM_RS09095 4ed3678ea2d5769a99d23989d2336043 225 PANTHER PTHR35561 9 225 9.8E-35 T 22-04-2016 SRM_RS09095 4ed3678ea2d5769a99d23989d2336043 225 Pfam PF02834 LigT like Phosphoesterase 54 132 5.0E-11 T 22-04-2016 IPR014051 Phosphoesterase, HXTX SRM_RS09095 4ed3678ea2d5769a99d23989d2336043 225 Pfam PF02834 LigT like Phosphoesterase 138 215 6.5E-12 T 22-04-2016 IPR014051 Phosphoesterase, HXTX SRM_RS09095 4ed3678ea2d5769a99d23989d2336043 225 TIGRFAM TIGR02258 2_5_ligase: 2'-5' RNA ligase 47 219 3.8E-42 T 22-04-2016 IPR004175 RNA 2',3'-cyclic phosphodiesterase GO:0004113|GO:0008664 SRM_RS09095 4ed3678ea2d5769a99d23989d2336043 225 Hamap MF_01940 RNA 2',3'-cyclic phosphodiesterase [thpR]. 47 223 22.995 T 22-04-2016 IPR004175 RNA 2',3'-cyclic phosphodiesterase GO:0004113|GO:0008664 SRM_RS09095 4ed3678ea2d5769a99d23989d2336043 225 PANTHER PTHR35561:SF1 9 225 9.8E-35 T 22-04-2016 SRM_RS09095 4ed3678ea2d5769a99d23989d2336043 225 Gene3D G3DSA:3.90.1140.10 47 225 3.5E-48 T 22-04-2016 IPR009097 RNA ligase/cyclic nucleotide phosphodiesterase SRM_RS09095 4ed3678ea2d5769a99d23989d2336043 225 SUPERFAMILY SSF55144 47 224 7.67E-41 T 22-04-2016 IPR009097 RNA ligase/cyclic nucleotide phosphodiesterase SRM_RS14105 2d1cd7455e2eaedef1d4cf60e85bfc4c 294 Pfam PF06439 Domain of Unknown Function (DUF1080) 87 292 2.5E-52 T 22-04-2016 IPR010496 Domain of unknown function DUF1080 SRM_RS11885 2c01231d4dd5ce9aca9aa6fbe7ead3bd 132 SUPERFAMILY SSF69754 31 129 8.5E-22 T 22-04-2016 IPR003489 Ribosomal protein S30Ae/sigma 54 modulation protein GO:0044238 SRM_RS11885 2c01231d4dd5ce9aca9aa6fbe7ead3bd 132 TIGRFAM TIGR00741 yfiA: ribosomal subunit interface protein 31 129 2.3E-14 T 22-04-2016 IPR003489 Ribosomal protein S30Ae/sigma 54 modulation protein GO:0044238 SRM_RS11885 2c01231d4dd5ce9aca9aa6fbe7ead3bd 132 Gene3D G3DSA:3.30.160.100 30 126 5.5E-23 T 22-04-2016 IPR003489 Ribosomal protein S30Ae/sigma 54 modulation protein GO:0044238 SRM_RS11885 2c01231d4dd5ce9aca9aa6fbe7ead3bd 132 Pfam PF02482 Sigma 54 modulation protein / S30EA ribosomal protein 32 124 7.6E-18 T 22-04-2016 IPR003489 Ribosomal protein S30Ae/sigma 54 modulation protein GO:0044238 SRM_RS01695 ddd86e7cb9e41fbc335b0380de1344a9 346 PANTHER PTHR33055:SF3 4 144 3.4E-15 T 22-04-2016 SRM_RS01695 ddd86e7cb9e41fbc335b0380de1344a9 346 PANTHER PTHR33055:SF3 169 270 3.4E-15 T 22-04-2016 SRM_RS01695 ddd86e7cb9e41fbc335b0380de1344a9 346 Pfam PF02371 Transposase IS116/IS110/IS902 family 220 292 5.7E-11 T 22-04-2016 IPR003346 Transposase, IS116/IS110/IS902 GO:0003677|GO:0004803|GO:0006313 SRM_RS01695 ddd86e7cb9e41fbc335b0380de1344a9 346 PANTHER PTHR33055 4 144 3.4E-15 T 22-04-2016 SRM_RS01695 ddd86e7cb9e41fbc335b0380de1344a9 346 PANTHER PTHR33055 169 270 3.4E-15 T 22-04-2016 SRM_RS01695 ddd86e7cb9e41fbc335b0380de1344a9 346 Pfam PF01548 Transposase 8 153 8.3E-9 T 22-04-2016 IPR002525 Transposase, IS111A/IS1328/IS1533, N-terminal GO:0003677|GO:0004803|GO:0006313 SRM_RS15205 1915717903a95e5427202fd990f94f90 96 Pfam PF05258 Protein of unknown function (DUF721) 8 95 2.5E-19 T 22-04-2016 IPR007922 Protein of unknown function DUF721/UPF0232 SRM_RS15205 1915717903a95e5427202fd990f94f90 96 PANTHER PTHR36456 5 96 1.5E-12 T 22-04-2016 SRM_RS11400 389249c8eef1c909d3b29e98e03fe1c3 500 PANTHER PTHR11819 259 484 3.5E-55 T 22-04-2016 IPR001734 Sodium/solute symporter GO:0005215|GO:0006810|GO:0016020|GO:0055085 SRM_RS11400 389249c8eef1c909d3b29e98e03fe1c3 500 PANTHER PTHR11819 4 243 3.5E-55 T 22-04-2016 IPR001734 Sodium/solute symporter GO:0005215|GO:0006810|GO:0016020|GO:0055085 SRM_RS11400 389249c8eef1c909d3b29e98e03fe1c3 500 Pfam PF00474 Sodium:solute symporter family 36 436 1.5E-31 T 22-04-2016 IPR001734 Sodium/solute symporter GO:0005215|GO:0006810|GO:0016020|GO:0055085 SRM_RS05230 4c72de1de74be0fb343faad4e64e451e 572 PIRSF PIRSF003128 1 571 1.8E-203 T 22-04-2016 IPR004604 DNA recombination/repair protein RecN GO:0005524|GO:0006281|GO:0006310 SRM_RS05230 4c72de1de74be0fb343faad4e64e451e 572 SUPERFAMILY SSF52540 1 218 9.62E-54 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SRM_RS05230 4c72de1de74be0fb343faad4e64e451e 572 SUPERFAMILY SSF52540 257 315 7.06E-27 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SRM_RS05230 4c72de1de74be0fb343faad4e64e451e 572 SUPERFAMILY SSF52540 344 527 7.06E-27 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SRM_RS05230 4c72de1de74be0fb343faad4e64e451e 572 Gene3D G3DSA:3.40.50.300 445 528 6.1E-7 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SRM_RS05230 4c72de1de74be0fb343faad4e64e451e 572 Gene3D G3DSA:3.40.50.300 1 207 2.0E-56 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SRM_RS05230 4c72de1de74be0fb343faad4e64e451e 572 TIGRFAM TIGR00634 recN: DNA repair protein RecN 1 566 7.9E-157 T 22-04-2016 IPR004604 DNA recombination/repair protein RecN GO:0005524|GO:0006281|GO:0006310 SRM_RS05230 4c72de1de74be0fb343faad4e64e451e 572 Pfam PF02463 RecF/RecN/SMC N terminal domain 2 521 1.2E-15 T 22-04-2016 IPR003395 RecF/RecN/SMC, N-terminal SRM_RS05230 4c72de1de74be0fb343faad4e64e451e 572 PANTHER PTHR11059 2 572 1.8E-148 T 22-04-2016 IPR004604 DNA recombination/repair protein RecN GO:0005524|GO:0006281|GO:0006310 SRM_RS04560 9ca597f582e63ed62674f0a7c6968176 446 SUPERFAMILY SSF51735 115 314 6.53E-37 T 22-04-2016 IPR016040 NAD(P)-binding domain SRM_RS04560 9ca597f582e63ed62674f0a7c6968176 446 Gene3D G3DSA:3.40.50.720 15 126 4.2E-17 T 22-04-2016 IPR016040 NAD(P)-binding domain SRM_RS04560 9ca597f582e63ed62674f0a7c6968176 446 Gene3D G3DSA:3.40.50.720 127 317 7.1E-44 T 22-04-2016 IPR016040 NAD(P)-binding domain SRM_RS04560 9ca597f582e63ed62674f0a7c6968176 446 PANTHER PTHR10996 4 345 1.5E-56 T 22-04-2016 SRM_RS04560 9ca597f582e63ed62674f0a7c6968176 446 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 124 314 2.4E-34 T 22-04-2016 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 SRM_RS04560 9ca597f582e63ed62674f0a7c6968176 446 PANTHER PTHR10996:SF20 4 345 1.5E-56 T 22-04-2016 SRM_RS04560 9ca597f582e63ed62674f0a7c6968176 446 Pfam PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain 23 339 3.0E-13 T 22-04-2016 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GO:0008152|GO:0016616|GO:0051287|GO:0055114 SRM_RS04560 9ca597f582e63ed62674f0a7c6968176 446 SUPERFAMILY SSF52283 15 149 8.93E-18 T 22-04-2016 SRM_RS07780 db66408473a33bbc85e755052cdffe0d 308 SUPERFAMILY SSF82861 49 133 1.14E-14 T 22-04-2016 IPR011014 Mechanosensitive ion channel MscS, transmembrane-2 GO:0016020 SRM_RS07780 db66408473a33bbc85e755052cdffe0d 308 SUPERFAMILY SSF82689 202 299 6.28E-25 T 22-04-2016 IPR011066 Mechanosensitive ion channel MscS, C-terminal GO:0016020 SRM_RS07780 db66408473a33bbc85e755052cdffe0d 308 Gene3D G3DSA:2.30.30.60 150 198 5.3E-18 T 22-04-2016 SRM_RS07780 db66408473a33bbc85e755052cdffe0d 308 Gene3D G3DSA:3.30.70.100 204 287 4.6E-18 T 22-04-2016 SRM_RS07780 db66408473a33bbc85e755052cdffe0d 308 ProSitePatterns PS01246 Uncharacterized protein family UPF0003 signature. 164 198 - T 22-04-2016 IPR006686 Mechanosensitive ion channel MscS, conserved site GO:0016020 SRM_RS07780 db66408473a33bbc85e755052cdffe0d 308 SUPERFAMILY SSF50182 135 199 7.52E-18 T 22-04-2016 IPR010920 LSM domain SRM_RS07780 db66408473a33bbc85e755052cdffe0d 308 Pfam PF00924 Mechanosensitive ion channel 93 289 1.7E-47 T 22-04-2016 IPR006685 Mechanosensitive ion channel MscS GO:0016020|GO:0055085 SRM_RS07780 db66408473a33bbc85e755052cdffe0d 308 PANTHER PTHR30221 39 300 1.1E-76 T 22-04-2016 SRM_RS07780 db66408473a33bbc85e755052cdffe0d 308 PANTHER PTHR30221:SF7 39 300 1.1E-76 T 22-04-2016 SRM_RS07780 db66408473a33bbc85e755052cdffe0d 308 Pfam PF05552 Conserved TM helix 42 85 5.5E-8 T 22-04-2016 IPR008910 Conserved TM helix SRM_RS12810 d4d6ef2c87b9642137bde2eb9bc9c2ec 285 TIGRFAM TIGR00507 aroE: shikimate dehydrogenase 9 278 4.0E-65 T 22-04-2016 IPR011342 Shikimate dehydrogenase GO:0004764|GO:0019632|GO:0050661|GO:0055114 KEGG: 00400+1.1.1.25|MetaCyc: PWY-6163|UniPathway: UPA00053 SRM_RS12810 d4d6ef2c87b9642137bde2eb9bc9c2ec 285 PANTHER PTHR21089:SF1 3 285 1.6E-87 T 22-04-2016 SRM_RS12810 d4d6ef2c87b9642137bde2eb9bc9c2ec 285 Gene3D G3DSA:3.40.50.720 112 283 1.3E-45 T 22-04-2016 IPR016040 NAD(P)-binding domain SRM_RS12810 d4d6ef2c87b9642137bde2eb9bc9c2ec 285 Hamap MF_00222 Shikimate dehydrogenase (NADP(+)) [aroE]. 7 284 32.829 T 22-04-2016 IPR022893 Shikimate dehydrogenase family GO:0004764|GO:0055114 KEGG: 00400+1.1.1.25|MetaCyc: PWY-6163|UniPathway: UPA00053 SRM_RS12810 d4d6ef2c87b9642137bde2eb9bc9c2ec 285 SUPERFAMILY SSF51735 107 283 8.02E-36 T 22-04-2016 IPR016040 NAD(P)-binding domain SRM_RS12810 d4d6ef2c87b9642137bde2eb9bc9c2ec 285 PANTHER PTHR21089 3 285 1.6E-87 T 22-04-2016 SRM_RS12810 d4d6ef2c87b9642137bde2eb9bc9c2ec 285 Gene3D G3DSA:3.40.192.10 5 111 3.6E-42 T 22-04-2016 SRM_RS12810 d4d6ef2c87b9642137bde2eb9bc9c2ec 285 SUPERFAMILY SSF53223 3 106 4.03E-35 T 22-04-2016 SRM_RS12810 d4d6ef2c87b9642137bde2eb9bc9c2ec 285 Pfam PF08501 Shikimate dehydrogenase substrate binding domain 12 94 8.4E-30 T 22-04-2016 IPR013708 Shikimate dehydrogenase substrate binding, N-terminal GO:0004764|GO:0055114 KEGG: 00400+1.1.1.25|MetaCyc: PWY-6163|UniPathway: UPA00053 SRM_RS07955 69659ab4341d7ed2c535a9a8fe042676 107 SMART SM01103 5 89 9.6E-29 T 22-04-2016 IPR001890 RNA-binding, CRM domain GO:0003723 SRM_RS07955 69659ab4341d7ed2c535a9a8fe042676 107 ProDom PD010559 RNA-BINDING YHBY UPF0044 PREDICTED RNA RIBOSOMAL CONTAINING KH BINDING DOMAIN 13 100 3.0E-7 T 22-04-2016 IPR001890 RNA-binding, CRM domain GO:0003723 SRM_RS07955 69659ab4341d7ed2c535a9a8fe042676 107 PANTHER PTHR31846 5 97 1.4E-14 T 22-04-2016 SRM_RS07955 69659ab4341d7ed2c535a9a8fe042676 107 Gene3D G3DSA:3.30.110.60 5 98 1.0E-22 T 22-04-2016 IPR001890 RNA-binding, CRM domain GO:0003723 SRM_RS07955 69659ab4341d7ed2c535a9a8fe042676 107 Pfam PF01985 CRS1 / YhbY (CRM) domain 5 89 2.7E-16 T 22-04-2016 IPR001890 RNA-binding, CRM domain GO:0003723 SRM_RS07955 69659ab4341d7ed2c535a9a8fe042676 107 SUPERFAMILY SSF75471 5 96 1.28E-21 T 22-04-2016 IPR001890 RNA-binding, CRM domain GO:0003723 SRM_RS12860 0727928d0f2925b400dbfb3a0aef1caf 199 SUPERFAMILY SSF48498 78 190 9.46E-21 T 22-04-2016 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal SRM_RS12860 0727928d0f2925b400dbfb3a0aef1caf 199 PANTHER PTHR30055 1 184 2.2E-50 T 22-04-2016 SRM_RS12860 0727928d0f2925b400dbfb3a0aef1caf 199 Pfam PF00440 Bacterial regulatory proteins, tetR family 14 58 6.0E-13 T 22-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 SRM_RS12860 0727928d0f2925b400dbfb3a0aef1caf 199 Gene3D G3DSA:1.10.10.60 1 64 2.0E-21 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 SRM_RS12860 0727928d0f2925b400dbfb3a0aef1caf 199 PANTHER PTHR30055:SF44 1 184 2.2E-50 T 22-04-2016 SRM_RS12860 0727928d0f2925b400dbfb3a0aef1caf 199 Gene3D G3DSA:1.10.357.10 71 190 3.9E-20 T 22-04-2016 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 SRM_RS12860 0727928d0f2925b400dbfb3a0aef1caf 199 SUPERFAMILY SSF46689 2 73 8.98E-17 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 SRM_RS14840 0b061f3225dbaeceac9d10d19995d09d 395 Pfam PF11141 Protein of unknown function (DUF2914) 312 378 2.3E-15 T 22-04-2016 IPR022606 Protein of unknown function DUF2914 SRM_RS11385 7395307e71a3ae8cccbe93d3d1e227f7 676 Pfam PF13598 Domain of unknown function (DUF4139) 213 508 3.8E-15 T 22-04-2016 IPR011935 Conserved hypothetical protein CHP02231 SRM_RS11385 7395307e71a3ae8cccbe93d3d1e227f7 676 SUPERFAMILY SSF57997 585 673 1.57E-5 T 22-04-2016 SRM_RS11855 4ac38763d39908be6d5722af8a771426 473 PANTHER PTHR33529 1 263 6.6E-70 T 22-04-2016 SRM_RS11855 4ac38763d39908be6d5722af8a771426 473 PANTHER PTHR33529 343 448 6.6E-70 T 22-04-2016 SRM_RS11855 4ac38763d39908be6d5722af8a771426 473 Pfam PF03739 Predicted permease YjgP/YjgQ family 8 448 4.4E-117 T 22-04-2016 IPR005495 Permease LptG/LptF-related GO:0016021 SRM_RS11855 4ac38763d39908be6d5722af8a771426 473 PANTHER PTHR33529:SF2 1 263 6.6E-70 T 22-04-2016 SRM_RS11855 4ac38763d39908be6d5722af8a771426 473 PANTHER PTHR33529:SF2 343 448 6.6E-70 T 22-04-2016 SRM_RS01980 aea62345c7d75e0f5e0d05d297588710 151 Pfam PF13471 Transglutaminase-like superfamily 10 122 5.7E-19 T 22-04-2016 IPR032708 Microcin J25-processing protein McjB, C-terminal SRM_RS02830 ff56f4d1837e8b17ca2f3889703daadb 335 PANTHER PTHR10366:SF12 9 321 5.1E-99 T 22-04-2016 SRM_RS02830 ff56f4d1837e8b17ca2f3889703daadb 335 Pfam PF01370 NAD dependent epimerase/dehydratase family 10 250 1.1E-33 T 22-04-2016 IPR001509 NAD-dependent epimerase/dehydratase, N-terminal domain GO:0003824|GO:0050662 SRM_RS02830 ff56f4d1837e8b17ca2f3889703daadb 335 SUPERFAMILY SSF51735 5 322 2.7E-66 T 22-04-2016 IPR016040 NAD(P)-binding domain SRM_RS02830 ff56f4d1837e8b17ca2f3889703daadb 335 PANTHER PTHR10366 9 321 5.1E-99 T 22-04-2016 SRM_RS02830 ff56f4d1837e8b17ca2f3889703daadb 335 Gene3D G3DSA:3.40.50.720 8 228 3.6E-53 T 22-04-2016 IPR016040 NAD(P)-binding domain SRM_RS13095 6c0000eb81a12a30aa752e9667adb70d 454 Gene3D G3DSA:3.40.50.10540 59 275 5.2E-84 T 22-04-2016 IPR023606 CoA-transferase family III domain SRM_RS13095 6c0000eb81a12a30aa752e9667adb70d 454 Gene3D G3DSA:3.40.50.10540 366 452 5.2E-84 T 22-04-2016 IPR023606 CoA-transferase family III domain SRM_RS13095 6c0000eb81a12a30aa752e9667adb70d 454 PANTHER PTHR24023:SF593 141 341 8.6E-22 T 22-04-2016 SRM_RS13095 6c0000eb81a12a30aa752e9667adb70d 454 Gene3D G3DSA:3.30.1540.10 281 365 3.8E-30 T 22-04-2016 SRM_RS13095 6c0000eb81a12a30aa752e9667adb70d 454 SUPERFAMILY SSF89796 59 452 3.4E-106 T 22-04-2016 IPR023606 CoA-transferase family III domain SRM_RS13095 6c0000eb81a12a30aa752e9667adb70d 454 Pfam PF02515 CoA-transferase family III 61 428 3.0E-102 T 22-04-2016 IPR003673 CoA-transferase family III GO:0003824 SRM_RS13095 6c0000eb81a12a30aa752e9667adb70d 454 PANTHER PTHR24023 141 341 8.6E-22 T 22-04-2016 SRM_RS06110 6480cbfc2134363160d029a23c2a5dd3 400 Pfam PF07676 WD40-like Beta Propeller Repeat 310 330 0.0087 T 22-04-2016 IPR011659 WD40-like Beta Propeller SRM_RS06110 6480cbfc2134363160d029a23c2a5dd3 400 Gene3D G3DSA:2.120.10.60 58 219 4.2E-12 T 22-04-2016 SRM_RS06110 6480cbfc2134363160d029a23c2a5dd3 400 Gene3D G3DSA:2.130.10.10 220 335 1.1E-7 T 22-04-2016 IPR015943 WD40/YVTN repeat-like-containing domain GO:0005515 SRM_RS06110 6480cbfc2134363160d029a23c2a5dd3 400 SUPERFAMILY SSF82171 37 145 1.94E-18 T 22-04-2016 SRM_RS06110 6480cbfc2134363160d029a23c2a5dd3 400 SUPERFAMILY SSF82171 192 356 1.94E-18 T 22-04-2016 SRM_RS11875 30cb45a652d2535ffa26eef46486c1d8 110 PANTHER PTHR11544 5 83 1.6E-22 T 22-04-2016 SRM_RS11875 30cb45a652d2535ffa26eef46486c1d8 110 SMART SM00357 3 68 8.3E-20 T 22-04-2016 IPR011129 Cold shock protein GO:0003676 SRM_RS11875 30cb45a652d2535ffa26eef46486c1d8 110 ProSitePatterns PS00352 'Cold-shock' domain signature. 15 34 - T 22-04-2016 IPR019844 Cold-shock conserved site SRM_RS11875 30cb45a652d2535ffa26eef46486c1d8 110 Pfam PF00313 'Cold-shock' DNA-binding domain 3 66 6.5E-24 T 22-04-2016 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 SRM_RS11875 30cb45a652d2535ffa26eef46486c1d8 110 PRINTS PR00050 Cold shock protein signature 25 34 3.0E-13 T 22-04-2016 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 SRM_RS11875 30cb45a652d2535ffa26eef46486c1d8 110 PRINTS PR00050 Cold shock protein signature 41 59 3.0E-13 T 22-04-2016 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 SRM_RS11875 30cb45a652d2535ffa26eef46486c1d8 110 PRINTS PR00050 Cold shock protein signature 4 19 3.0E-13 T 22-04-2016 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 SRM_RS11875 30cb45a652d2535ffa26eef46486c1d8 110 SUPERFAMILY SSF50249 2 68 7.07E-19 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold SRM_RS11875 30cb45a652d2535ffa26eef46486c1d8 110 Gene3D G3DSA:2.40.50.140 1 66 5.2E-24 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold SRM_RS02130 e63480c053d0ddc4f2a45019799f26b6 378 Pfam PF10437 Bacterial lipoate protein ligase C-terminus 289 374 1.9E-20 T 22-04-2016 IPR019491 Lipoate protein ligase, C-terminal UniPathway: UPA00537|UniPathway: UPA00537 SRM_RS02130 e63480c053d0ddc4f2a45019799f26b6 378 Pfam PF03099 Biotin/lipoate A/B protein ligase family 92 201 4.3E-10 T 22-04-2016 IPR004143 Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL), catalytic domain GO:0006464 SRM_RS02130 e63480c053d0ddc4f2a45019799f26b6 378 PANTHER PTHR12561 12 377 2.5E-98 T 22-04-2016 SRM_RS02130 e63480c053d0ddc4f2a45019799f26b6 378 SUPERFAMILY SSF55681 49 287 1.33E-70 T 22-04-2016 SRM_RS02130 e63480c053d0ddc4f2a45019799f26b6 378 Gene3D G3DSA:3.30.390.50 288 375 2.6E-22 T 22-04-2016 SRM_RS02130 e63480c053d0ddc4f2a45019799f26b6 378 Gene3D G3DSA:3.90.1550.10 51 286 1.6E-71 T 22-04-2016 SRM_RS02130 e63480c053d0ddc4f2a45019799f26b6 378 TIGRFAM TIGR00545 lipoyltrans: lipoyltransferase and lipoate-protein ligase 48 358 5.4E-92 T 22-04-2016 IPR004562 Lipoyltransferase/lipoate-protein ligase GO:0009249 UniPathway: UPA00537|UniPathway: UPA00537 SRM_RS02130 e63480c053d0ddc4f2a45019799f26b6 378 SUPERFAMILY SSF82649 289 376 4.13E-18 T 22-04-2016 SRM_RS02130 e63480c053d0ddc4f2a45019799f26b6 378 PANTHER PTHR12561:SF3 12 377 2.5E-98 T 22-04-2016 SRM_RS12220 ad2e30523d915d4300947d3307a0485f 374 Pfam PF01636 Phosphotransferase enzyme family 44 301 6.4E-15 T 22-04-2016 IPR002575 Aminoglycoside phosphotransferase SRM_RS12220 ad2e30523d915d4300947d3307a0485f 374 SUPERFAMILY SSF56112 20 324 2.19E-37 T 22-04-2016 IPR011009 Protein kinase-like domain SRM_RS12220 ad2e30523d915d4300947d3307a0485f 374 Gene3D G3DSA:3.90.1200.10 151 313 2.0E-13 T 22-04-2016 SRM_RS12640 afaad5c83e94c977761475d0f2761371 224 SUPERFAMILY SSF109854 81 220 2.93E-14 T 22-04-2016 SRM_RS12640 afaad5c83e94c977761475d0f2761371 224 Pfam PF12867 DinB superfamily 83 207 1.7E-8 T 22-04-2016 IPR024775 DinB-like domain SRM_RS12640 afaad5c83e94c977761475d0f2761371 224 Gene3D G3DSA:1.20.120.450 79 216 7.9E-5 T 22-04-2016 IPR027369 DinB/YfiT-like putative metal-dependent hydrolase SRM_RS11980 4f29af2e95e4d45c5c9ef61f1a2248a5 429 Gene3D G3DSA:3.40.1390.30 51 160 9.0E-39 T 22-04-2016 SRM_RS11980 4f29af2e95e4d45c5c9ef61f1a2248a5 429 SUPERFAMILY SSF102705 51 416 6.8E-108 T 22-04-2016 IPR002678 GTP cyclohydrolase 1 type 2/Nif3 SRM_RS11980 4f29af2e95e4d45c5c9ef61f1a2248a5 429 Pfam PF01784 NIF3 (NGG1p interacting factor 3) 53 402 7.5E-73 T 22-04-2016 IPR002678 GTP cyclohydrolase 1 type 2/Nif3 SRM_RS11980 4f29af2e95e4d45c5c9ef61f1a2248a5 429 Gene3D G3DSA:3.40.1390.30 161 177 5.2E-33 T 22-04-2016 SRM_RS11980 4f29af2e95e4d45c5c9ef61f1a2248a5 429 Gene3D G3DSA:3.40.1390.30 285 366 5.2E-33 T 22-04-2016 SRM_RS11980 4f29af2e95e4d45c5c9ef61f1a2248a5 429 PANTHER PTHR13799 40 181 7.4E-90 T 22-04-2016 IPR002678 GTP cyclohydrolase 1 type 2/Nif3 SRM_RS11980 4f29af2e95e4d45c5c9ef61f1a2248a5 429 PANTHER PTHR13799 203 418 7.4E-90 T 22-04-2016 IPR002678 GTP cyclohydrolase 1 type 2/Nif3 SRM_RS11980 4f29af2e95e4d45c5c9ef61f1a2248a5 429 TIGRFAM TIGR00486 YbgI_SA1388: dinuclear metal center protein, YbgI/SA1388 family 51 387 2.2E-47 T 22-04-2016 IPR002678 GTP cyclohydrolase 1 type 2/Nif3 SRM_RS11980 4f29af2e95e4d45c5c9ef61f1a2248a5 429 Gene3D G3DSA:3.30.70.830 178 283 5.3E-35 T 22-04-2016 SRM_RS09555 7908d22e6c60f10e47383f554d7efc2d 318 SUPERFAMILY SSF53807 2 294 5.1E-39 T 22-04-2016 SRM_RS09555 7908d22e6c60f10e47383f554d7efc2d 318 PANTHER PTHR30535 2 295 1.3E-60 T 22-04-2016 SRM_RS09555 7908d22e6c60f10e47383f554d7efc2d 318 Pfam PF01497 Periplasmic binding protein 3 269 5.9E-13 T 22-04-2016 IPR002491 ABC transporter periplasmic binding domain GO:0005488 SRM_RS09555 7908d22e6c60f10e47383f554d7efc2d 318 Gene3D G3DSA:3.40.50.1980 171 295 2.0E-19 T 22-04-2016 SRM_RS09555 7908d22e6c60f10e47383f554d7efc2d 318 Gene3D G3DSA:3.40.50.1980 2 151 4.9E-22 T 22-04-2016 SRM_RS09555 7908d22e6c60f10e47383f554d7efc2d 318 PANTHER PTHR30535:SF2 2 295 1.3E-60 T 22-04-2016 SRM_RS04555 45176a8f2413f31d3f7b01934ddf1885 204 Pfam PF16267 Domain of unknown function (DUF4920) 107 185 9.4E-14 T 22-04-2016 IPR032577 Protein of unknown function DUF4920 SRM_RS15365 6e1eda5afa254b3c649a5ef28701fe29 122 PANTHER PTHR36974 5 115 2.6E-32 T 22-04-2016 SRM_RS15365 6e1eda5afa254b3c649a5ef28701fe29 122 Pfam PF13564 DoxX-like family 7 86 8.2E-7 T 22-04-2016 IPR032808 DoxX family SRM_RS10835 55f79ec467523984ac246e91e275bdf7 171 SUPERFAMILY SSF54427 34 158 4.97E-19 T 22-04-2016 IPR032710 NTF2-like domain SRM_RS10835 55f79ec467523984ac246e91e275bdf7 171 Gene3D G3DSA:3.10.450.50 36 151 1.5E-11 T 22-04-2016 IPR032710 NTF2-like domain SRM_RS10835 55f79ec467523984ac246e91e275bdf7 171 Pfam PF12893 Putative lumazine-binding 36 123 2.5E-6 T 22-04-2016 SRM_RS14095 95aadf09e8f0fe4ed2faae663bdb0853 322 SUPERFAMILY SSF51658 49 307 3.67E-44 T 22-04-2016 IPR013022 Xylose isomerase-like, TIM barrel domain SRM_RS14095 95aadf09e8f0fe4ed2faae663bdb0853 322 Pfam PF01261 Xylose isomerase-like TIM barrel 94 256 1.2E-15 T 22-04-2016 IPR013022 Xylose isomerase-like, TIM barrel domain SRM_RS14095 95aadf09e8f0fe4ed2faae663bdb0853 322 Gene3D G3DSA:3.20.20.150 55 301 1.8E-39 T 22-04-2016 IPR013022 Xylose isomerase-like, TIM barrel domain SRM_RS14095 95aadf09e8f0fe4ed2faae663bdb0853 322 PANTHER PTHR12110 49 319 1.4E-20 T 22-04-2016 SRM_RS08455 69188e5b66ae462137d050433f5cfb5e 535 Pfam PF02541 Ppx/GppA phosphatase family 23 308 5.8E-58 T 22-04-2016 IPR003695 Ppx/GppA phosphatase KEGG: 00230+3.6.1.40|UniPathway: UPA00908 SRM_RS08455 69188e5b66ae462137d050433f5cfb5e 535 SUPERFAMILY SSF109604 323 513 4.35E-46 T 22-04-2016 SRM_RS08455 69188e5b66ae462137d050433f5cfb5e 535 PANTHER PTHR30005 3 461 1.7E-106 T 22-04-2016 SRM_RS08455 69188e5b66ae462137d050433f5cfb5e 535 SUPERFAMILY SSF53067 6 127 3.24E-33 T 22-04-2016 SRM_RS08455 69188e5b66ae462137d050433f5cfb5e 535 Gene3D G3DSA:3.30.420.40 5 126 1.2E-38 T 22-04-2016 SRM_RS08455 69188e5b66ae462137d050433f5cfb5e 535 Pfam PF01966 HD domain 355 460 6.6E-9 T 22-04-2016 IPR006674 HD domain SRM_RS08455 69188e5b66ae462137d050433f5cfb5e 535 Gene3D G3DSA:1.10.3210.10 341 460 1.1E-7 T 22-04-2016 IPR006674 HD domain SRM_RS08455 69188e5b66ae462137d050433f5cfb5e 535 Gene3D G3DSA:3.30.420.150 130 309 8.2E-45 T 22-04-2016 SRM_RS08455 69188e5b66ae462137d050433f5cfb5e 535 PIRSF PIRSF001267 2 505 2.0E-109 T 22-04-2016 IPR030673 Pyrophosphatase, GppA/Ppx-type KEGG: 00230+3.6.1.40|UniPathway: UPA00908 SRM_RS08455 69188e5b66ae462137d050433f5cfb5e 535 SUPERFAMILY SSF53067 132 309 4.45E-36 T 22-04-2016 SRM_RS06625 f90f8949cad91a790f0316691de2cf7d 346 Gene3D G3DSA:3.20.20.410 22 337 1.2E-22 T 22-04-2016 IPR002763 Protein of unknown function DUF72 SRM_RS06625 f90f8949cad91a790f0316691de2cf7d 346 Pfam PF01904 Protein of unknown function DUF72 72 335 1.0E-30 T 22-04-2016 IPR002763 Protein of unknown function DUF72 SRM_RS06625 f90f8949cad91a790f0316691de2cf7d 346 SUPERFAMILY SSF117396 22 43 1.11E-18 T 22-04-2016 IPR002763 Protein of unknown function DUF72 SRM_RS06625 f90f8949cad91a790f0316691de2cf7d 346 SUPERFAMILY SSF117396 71 329 1.11E-18 T 22-04-2016 IPR002763 Protein of unknown function DUF72 SRM_RS04500 73bc5166354437747355c2e43fbc3b39 97 Pfam PF13744 Helix-turn-helix domain 12 93 5.7E-22 T 22-04-2016 SRM_RS04500 73bc5166354437747355c2e43fbc3b39 97 SMART SM00530 27 91 0.0044 T 22-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 SRM_RS04500 73bc5166354437747355c2e43fbc3b39 97 Gene3D G3DSA:1.10.260.40 22 85 8.7E-25 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 SRM_RS04500 73bc5166354437747355c2e43fbc3b39 97 SUPERFAMILY SSF47413 22 96 2.76E-19 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 SRM_RS06160 062fe2a216e511347f298c95be455498 245 SUPERFAMILY SSF52317 1 233 4.05E-47 T 22-04-2016 IPR029062 Class I glutamine amidotransferase-like SRM_RS06160 062fe2a216e511347f298c95be455498 245 PANTHER PTHR11922 46 188 4.4E-35 T 22-04-2016 SRM_RS06160 062fe2a216e511347f298c95be455498 245 PRINTS PR00097 Anthranilate synthase component II signature 137 149 1.5E-5 T 22-04-2016 SRM_RS06160 062fe2a216e511347f298c95be455498 245 PRINTS PR00097 Anthranilate synthase component II signature 93 104 1.5E-5 T 22-04-2016 SRM_RS06160 062fe2a216e511347f298c95be455498 245 PRINTS PR00097 Anthranilate synthase component II signature 177 190 1.5E-5 T 22-04-2016 SRM_RS06160 062fe2a216e511347f298c95be455498 245 ProDom PD037892 HOMOSERINE O-SUCCINYLTRANSFERASE TRANSFERASE ACYLTRANSFERASE BIOSYNTHESIS TRANSSUCCINYLASE HTS METHIONINE O- AMINO-ACID 56 188 4.0E-4 T 22-04-2016 SRM_RS06160 062fe2a216e511347f298c95be455498 245 Pfam PF00117 Glutamine amidotransferase class-I 55 193 1.3E-18 T 22-04-2016 IPR017926 Glutamine amidotransferase Reactome: REACT_1698 SRM_RS06160 062fe2a216e511347f298c95be455498 245 Gene3D G3DSA:3.40.50.880 3 229 1.8E-46 T 22-04-2016 IPR029062 Class I glutamine amidotransferase-like SRM_RS08580 2c73b541e03ff327968c21e38f871987 264 PANTHER PTHR32243:SF18 7 264 3.4E-76 T 22-04-2016 SRM_RS08580 2c73b541e03ff327968c21e38f871987 264 SUPERFAMILY SSF161098 6 263 8.6E-62 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 SRM_RS08580 2c73b541e03ff327968c21e38f871987 264 PANTHER PTHR32243 7 264 3.4E-76 T 22-04-2016 SRM_RS08580 2c73b541e03ff327968c21e38f871987 264 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 83 257 1.3E-13 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 SRM_RS08580 2c73b541e03ff327968c21e38f871987 264 Gene3D G3DSA:1.10.3720.10 6 251 8.8E-57 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 SRM_RS02015 157655d15526bd78d448792e9f7d118c 922 SUPERFAMILY SSF51126 214 501 3.93E-23 T 22-04-2016 IPR011050 Pectin lyase fold/virulence factor SRM_RS02015 157655d15526bd78d448792e9f7d118c 922 Pfam PF13229 Right handed beta helix region 565 671 1.8E-7 T 22-04-2016 SRM_RS02015 157655d15526bd78d448792e9f7d118c 922 SMART SM00710 318 349 5800.0 T 22-04-2016 IPR006626 Parallel beta-helix repeat SRM_RS02015 157655d15526bd78d448792e9f7d118c 922 SMART SM00710 640 662 430.0 T 22-04-2016 IPR006626 Parallel beta-helix repeat SRM_RS02015 157655d15526bd78d448792e9f7d118c 922 SMART SM00710 564 590 6.5 T 22-04-2016 IPR006626 Parallel beta-helix repeat SRM_RS02015 157655d15526bd78d448792e9f7d118c 922 SMART SM00710 617 638 1100.0 T 22-04-2016 IPR006626 Parallel beta-helix repeat SRM_RS02015 157655d15526bd78d448792e9f7d118c 922 SMART SM00710 356 385 23.0 T 22-04-2016 IPR006626 Parallel beta-helix repeat SRM_RS02015 157655d15526bd78d448792e9f7d118c 922 SMART SM00710 387 415 540.0 T 22-04-2016 IPR006626 Parallel beta-helix repeat SRM_RS02015 157655d15526bd78d448792e9f7d118c 922 TIGRFAM TIGR04183 Por_Secre_tail: Por secretion system C-terminal sorting domain 840 918 7.5E-9 T 22-04-2016 IPR026444 Secretion system C-terminal sorting domain SRM_RS02015 157655d15526bd78d448792e9f7d118c 922 SUPERFAMILY SSF51126 517 672 2.09E-19 T 22-04-2016 IPR011050 Pectin lyase fold/virulence factor SRM_RS02015 157655d15526bd78d448792e9f7d118c 922 SUPERFAMILY SSF51126 739 757 2.09E-19 T 22-04-2016 IPR011050 Pectin lyase fold/virulence factor SRM_RS02015 157655d15526bd78d448792e9f7d118c 922 Gene3D G3DSA:2.160.20.10 501 665 7.8E-13 T 22-04-2016 IPR012334 Pectin lyase fold SRM_RS02015 157655d15526bd78d448792e9f7d118c 922 Gene3D G3DSA:2.160.20.10 215 470 3.7E-16 T 22-04-2016 IPR012334 Pectin lyase fold SRM_RS02015 157655d15526bd78d448792e9f7d118c 922 Pfam PF13860 FlgD Ig-like domain 846 910 1.9E-10 T 22-04-2016 IPR025965 FlgD Ig-like domain SRM_RS04920 3db90bb862964f9bd9353a01e51ab826 103 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 21 95 3.2E-8 T 22-04-2016 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 SRM_RS04920 3db90bb862964f9bd9353a01e51ab826 103 Gene3D G3DSA:3.10.20.30 13 101 3.0E-13 T 22-04-2016 IPR012675 Beta-grasp domain SRM_RS04920 3db90bb862964f9bd9353a01e51ab826 103 SUPERFAMILY SSF54292 13 102 2.62E-15 T 22-04-2016 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 SRM_RS04105 a905f8182c66f5820407c3266d718108 413 PANTHER PTHR30349:SF26 41 407 1.1E-44 T 22-04-2016 SRM_RS04105 a905f8182c66f5820407c3266d718108 413 PANTHER PTHR30349 41 407 1.1E-44 T 22-04-2016 SRM_RS04105 a905f8182c66f5820407c3266d718108 413 Gene3D G3DSA:1.10.150.130 126 207 2.8E-6 T 22-04-2016 IPR023109 Integrase/recombinase, N-terminal SRM_RS04105 a905f8182c66f5820407c3266d718108 413 SUPERFAMILY SSF56349 112 403 3.83E-37 T 22-04-2016 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 SRM_RS04105 a905f8182c66f5820407c3266d718108 413 Gene3D G3DSA:1.10.443.10 221 404 9.4E-27 T 22-04-2016 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 SRM_RS04105 a905f8182c66f5820407c3266d718108 413 Pfam PF00589 Phage integrase family 221 397 9.3E-20 T 22-04-2016 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 SRM_RS04105 a905f8182c66f5820407c3266d718108 413 Pfam PF13102 Phage integrase SAM-like domain 7 170 2.4E-29 T 22-04-2016 IPR025269 Phage integrase SAM-like domain SRM_RS13780 af974e8dec7387bb279654b2c6b70f2c 69 Gene3D G3DSA:1.20.120.450 3 67 1.3E-8 T 22-04-2016 IPR027369 DinB/YfiT-like putative metal-dependent hydrolase SRM_RS13780 af974e8dec7387bb279654b2c6b70f2c 69 Pfam PF05163 DinB family 35 68 1.7E-7 T 22-04-2016 IPR007837 DNA damage-inducible protein DinB SRM_RS13780 af974e8dec7387bb279654b2c6b70f2c 69 SUPERFAMILY SSF109854 2 61 3.66E-10 T 22-04-2016 SRM_RS02400 81436ea35cd7b590856548fedcd048b3 144 PANTHER PTHR34134 1 133 4.6E-25 T 22-04-2016 SRM_RS02400 81436ea35cd7b590856548fedcd048b3 144 PIRSF PIRSF019455 1 133 1.1E-20 T 22-04-2016 IPR005650 BlaI transcriptional regulatory family GO:0003677|GO:0045892 SRM_RS02400 81436ea35cd7b590856548fedcd048b3 144 PANTHER PTHR34134:SF2 1 133 4.6E-25 T 22-04-2016 SRM_RS02400 81436ea35cd7b590856548fedcd048b3 144 SUPERFAMILY SSF46785 8 124 1.87E-20 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SRM_RS02400 81436ea35cd7b590856548fedcd048b3 144 Gene3D G3DSA:1.10.10.10 8 80 1.7E-15 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SRM_RS02400 81436ea35cd7b590856548fedcd048b3 144 Pfam PF03965 Penicillinase repressor 9 122 1.2E-23 T 22-04-2016 IPR005650 BlaI transcriptional regulatory family GO:0003677|GO:0045892 SRM_RS14485 ac557370da19480dfe1382986d409e90 432 Pfam PF00460 Flagella basal body rod protein 6 36 5.3E-9 T 22-04-2016 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 SRM_RS14485 ac557370da19480dfe1382986d409e90 432 PANTHER PTHR30435 3 140 2.7E-70 T 22-04-2016 SRM_RS14485 ac557370da19480dfe1382986d409e90 432 PANTHER PTHR30435 309 432 2.7E-70 T 22-04-2016 SRM_RS14485 ac557370da19480dfe1382986d409e90 432 Pfam PF07559 Flagellar basal body protein FlaE 190 311 3.7E-11 T 22-04-2016 IPR011491 Flagellar hook protein FlgE SRM_RS14485 ac557370da19480dfe1382986d409e90 432 SUPERFAMILY SSF117143 92 392 5.75E-58 T 22-04-2016 SRM_RS14485 ac557370da19480dfe1382986d409e90 432 Pfam PF06429 Flagellar basal body rod FlgEFG protein C-terminal 352 430 2.5E-20 T 22-04-2016 IPR010930 Flagellar basal-body/hook protein, C-terminal domain SRM_RS14485 ac557370da19480dfe1382986d409e90 432 TIGRFAM TIGR03506 FlgEFG_subfam: flagellar hook-basal body protein 5 413 2.1E-82 T 22-04-2016 IPR020013 Fagellar hook-basal body protein, FlgE/F/G SRM_RS14485 ac557370da19480dfe1382986d409e90 432 PANTHER PTHR30435:SF1 3 140 2.7E-70 T 22-04-2016 SRM_RS14485 ac557370da19480dfe1382986d409e90 432 PANTHER PTHR30435:SF1 309 432 2.7E-70 T 22-04-2016 SRM_RS10290 a26a6fd6f1c56f38a88cb2feea9e6770 227 Gene3D G3DSA:3.40.50.300 2 220 1.2E-62 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SRM_RS10290 a26a6fd6f1c56f38a88cb2feea9e6770 227 PANTHER PTHR21299 2 221 8.2E-54 T 22-04-2016 SRM_RS10290 a26a6fd6f1c56f38a88cb2feea9e6770 227 Pfam PF02224 Cytidylate kinase 3 220 1.0E-61 T 22-04-2016 IPR011994 Cytidylate kinase domain GO:0004127|GO:0005524|GO:0006139 MetaCyc: PWY-7205 SRM_RS10290 a26a6fd6f1c56f38a88cb2feea9e6770 227 SUPERFAMILY SSF52540 2 219 9.16E-36 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SRM_RS10290 a26a6fd6f1c56f38a88cb2feea9e6770 227 Hamap MF_00238 Cytidylate kinase [cmk]. 1 223 31.754 T 22-04-2016 IPR003136 Cytidylate kinase GO:0004127|GO:0005524|GO:0006139 MetaCyc: PWY-7205 SRM_RS10290 a26a6fd6f1c56f38a88cb2feea9e6770 227 TIGRFAM TIGR00017 cmk: cytidylate kinase 2 217 4.4E-60 T 22-04-2016 IPR003136 Cytidylate kinase GO:0004127|GO:0005524|GO:0006139 MetaCyc: PWY-7205 SRM_RS04680 7f64e0aee0a6be518dd284b96332f46d 285 Pfam PF01048 Phosphorylase superfamily 47 276 4.2E-35 T 22-04-2016 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 SRM_RS04680 7f64e0aee0a6be518dd284b96332f46d 285 PANTHER PTHR11904 48 243 1.2E-64 T 22-04-2016 IPR001369 PNP/MTAP phosphorylase SRM_RS04680 7f64e0aee0a6be518dd284b96332f46d 285 SUPERFAMILY SSF53167 17 243 5.42E-54 T 22-04-2016 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 SRM_RS04680 7f64e0aee0a6be518dd284b96332f46d 285 Gene3D G3DSA:3.40.50.1580 17 251 8.3E-63 T 22-04-2016 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 SRM_RS04680 7f64e0aee0a6be518dd284b96332f46d 285 TIGRFAM TIGR01697 PNPH-PUNA-XAPA: inosine/guanosine/xanthosine phosphorylase family 54 250 5.3E-62 T 22-04-2016 IPR011268 Purine nucleoside phosphorylase GO:0004731|GO:0006139 KEGG: 00230+2.4.2.1|KEGG: 00240+2.4.2.1|KEGG: 00760+2.4.2.1|MetaCyc: PWY-4202|MetaCyc: PWY-5695|MetaCyc: PWY-6608|MetaCyc: PWY-6609|MetaCyc: PWY-6611|MetaCyc: PWY-6620|MetaCyc: PWY-6627|MetaCyc: PWY-6644|MetaCyc: PWY-7179|MetaCyc: PWY-7179-1|UniPathway: UPA00606 SRM_RS04680 7f64e0aee0a6be518dd284b96332f46d 285 PANTHER PTHR11904:SF9 48 243 1.2E-64 T 22-04-2016 IPR011268 Purine nucleoside phosphorylase GO:0004731|GO:0006139 KEGG: 00230+2.4.2.1|KEGG: 00240+2.4.2.1|KEGG: 00760+2.4.2.1|MetaCyc: PWY-4202|MetaCyc: PWY-5695|MetaCyc: PWY-6608|MetaCyc: PWY-6609|MetaCyc: PWY-6611|MetaCyc: PWY-6620|MetaCyc: PWY-6627|MetaCyc: PWY-6644|MetaCyc: PWY-7179|MetaCyc: PWY-7179-1|UniPathway: UPA00606 SRM_RS08575 55831eecf289782256752b505a0b4501 96 Pfam PF09928 Predicted small integral membrane protein (DUF2160) 8 87 4.1E-23 T 22-04-2016 IPR018678 Protein of unknown function DUF2160, transmembrane SRM_RS07575 6956ccd80c15e06cd12994f2f368690b 174 PANTHER PTHR13194 10 172 1.5E-42 T 22-04-2016 SRM_RS07575 6956ccd80c15e06cd12994f2f368690b 174 Pfam PF08547 Complex I intermediate-associated protein 30 (CIA30) 11 163 1.2E-42 T 22-04-2016 IPR013857 NADH:ubiquinone oxidoreductase intermediate-associated protein 30 SRM_RS07575 6956ccd80c15e06cd12994f2f368690b 174 SUPERFAMILY SSF49785 10 167 8.5E-36 T 22-04-2016 IPR008979 Galactose-binding domain-like SRM_RS05070 ed03725da55df05a85ed71afe3f2aab1 218 Pfam PF02230 Phospholipase/Carboxylesterase 32 213 8.1E-7 T 22-04-2016 IPR003140 Phospholipase/carboxylesterase/thioesterase GO:0016787 SRM_RS05070 ed03725da55df05a85ed71afe3f2aab1 218 Gene3D G3DSA:3.40.50.1820 27 213 8.1E-24 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold SRM_RS05070 ed03725da55df05a85ed71afe3f2aab1 218 SUPERFAMILY SSF53474 25 210 7.6E-25 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold SRM_RS05000 65da061b88865304d73c97f1a552b4b1 359 PIRSF PIRSF001619 1 326 1.5E-112 T 22-04-2016 IPR024177 Biotin synthase KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380|UniPathway: UPA00078 SRM_RS05000 65da061b88865304d73c97f1a552b4b1 359 Gene3D G3DSA:3.20.20.70 17 321 5.9E-82 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 SRM_RS05000 65da061b88865304d73c97f1a552b4b1 359 PANTHER PTHR22976:SF1 4 321 2.5E-136 T 22-04-2016 SRM_RS05000 65da061b88865304d73c97f1a552b4b1 359 SMART SM00729 55 263 3.2E-30 T 22-04-2016 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 SRM_RS05000 65da061b88865304d73c97f1a552b4b1 359 SMART SM00876 231 321 3.6E-32 T 22-04-2016 IPR010722 Biotin and thiamin synthesis-associated domain KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380|UniPathway: UPA00078 SRM_RS05000 65da061b88865304d73c97f1a552b4b1 359 TIGRFAM TIGR00433 bioB: biotin synthase 28 320 5.4E-114 T 22-04-2016 IPR002684 Biotin synthase/Biotin biosynthesis bifunctional protein BioAB GO:0004076|GO:0009102 KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380|UniPathway: UPA00078 SRM_RS05000 65da061b88865304d73c97f1a552b4b1 359 Pfam PF06968 Biotin and Thiamin Synthesis associated domain 231 320 1.7E-13 T 22-04-2016 IPR010722 Biotin and thiamin synthesis-associated domain KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380|UniPathway: UPA00078 SRM_RS05000 65da061b88865304d73c97f1a552b4b1 359 Hamap MF_01694 Biotin synthase [bioB]. 15 322 40.369 T 22-04-2016 IPR002684 Biotin synthase/Biotin biosynthesis bifunctional protein BioAB GO:0004076|GO:0009102 KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380|UniPathway: UPA00078 SRM_RS05000 65da061b88865304d73c97f1a552b4b1 359 Pfam PF04055 Radical SAM superfamily 64 219 3.9E-15 T 22-04-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 SRM_RS05000 65da061b88865304d73c97f1a552b4b1 359 PANTHER PTHR22976 4 321 2.5E-136 T 22-04-2016 SRM_RS05000 65da061b88865304d73c97f1a552b4b1 359 SUPERFAMILY SSF102114 16 322 1.2E-68 T 22-04-2016 SRM_RS09420 16e4869d18f2afd1ad53a8b9796355bd 241 SUPERFAMILY SSF75217 5 235 2.42E-90 T 22-04-2016 IPR029028 Alpha/beta knot methyltransferases SRM_RS09420 16e4869d18f2afd1ad53a8b9796355bd 241 Pfam PF01746 tRNA (Guanine-1)-methyltransferase 27 225 1.9E-59 T 22-04-2016 IPR016009 tRNA methyltransferase TRMD/TRM10-type domain KEGG: 00340+2.1.1.22|MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 SRM_RS09420 16e4869d18f2afd1ad53a8b9796355bd 241 PANTHER PTHR32125:SF1 4 232 9.6E-98 T 22-04-2016 SRM_RS09420 16e4869d18f2afd1ad53a8b9796355bd 241 Gene3D G3DSA:3.40.1280.10 5 164 2.7E-62 T 22-04-2016 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal SRM_RS09420 16e4869d18f2afd1ad53a8b9796355bd 241 PANTHER PTHR32125 4 232 9.6E-98 T 22-04-2016 SRM_RS09420 16e4869d18f2afd1ad53a8b9796355bd 241 Gene3D G3DSA:1.10.1270.20 165 236 2.9E-27 T 22-04-2016 IPR023148 tRNA (guanine-N1-)-methyltransferase, C-terminal GO:0008033|GO:0052906 KEGG: 00340+2.1.1.22|MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 SRM_RS09420 16e4869d18f2afd1ad53a8b9796355bd 241 Hamap MF_00605 tRNA (guanine-N(1)-)-methyltransferase [trmD]. 1 241 97.67 T 22-04-2016 IPR002649 tRNA (guanine-N1-)-methyltransferase, bacteria GO:0008033|GO:0052906 KEGG: 00340+2.1.1.22|MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 SRM_RS09420 16e4869d18f2afd1ad53a8b9796355bd 241 TIGRFAM TIGR00088 trmD: tRNA (guanine(37)-N(1))-methyltransferase 6 233 1.8E-86 T 22-04-2016 IPR002649 tRNA (guanine-N1-)-methyltransferase, bacteria GO:0008033|GO:0052906 KEGG: 00340+2.1.1.22|MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 SRM_RS09420 16e4869d18f2afd1ad53a8b9796355bd 241 PIRSF PIRSF000386 5 241 2.9E-91 T 22-04-2016 IPR002649 tRNA (guanine-N1-)-methyltransferase, bacteria GO:0008033|GO:0052906 KEGG: 00340+2.1.1.22|MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 SRM_RS13740 bbd44f2c248dc02ea37f378c3a88a9f1 386 Pfam PF01758 Sodium Bile acid symporter family 88 284 6.2E-50 T 22-04-2016 IPR002657 Bile acid:sodium symporter/arsenical resistance protein Acr3 GO:0016020 SRM_RS13740 bbd44f2c248dc02ea37f378c3a88a9f1 386 PANTHER PTHR10361 16 382 1.2E-133 T 22-04-2016 IPR002657 Bile acid:sodium symporter/arsenical resistance protein Acr3 GO:0016020 SRM_RS13740 bbd44f2c248dc02ea37f378c3a88a9f1 386 TIGRFAM TIGR00832 acr3: arsenical-resistance protein 42 372 2.5E-123 T 22-04-2016 IPR004706 Arsenical-resistance protein Acr3 GO:0015103|GO:0015297|GO:0016021 SRM_RS13740 bbd44f2c248dc02ea37f378c3a88a9f1 386 PIRSF PIRSF005508 29 386 4.5E-135 T 22-04-2016 IPR004706 Arsenical-resistance protein Acr3 GO:0015103|GO:0015297|GO:0016021 SRM_RS13740 bbd44f2c248dc02ea37f378c3a88a9f1 386 PANTHER PTHR10361:SF31 16 382 1.2E-133 T 22-04-2016 IPR004706 Arsenical-resistance protein Acr3 GO:0015103|GO:0015297|GO:0016021 SRM_RS09545 e52bf3c5f107043c6625b7ebc0b5d476 250 SUPERFAMILY SSF53448 13 232 8.34E-51 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases SRM_RS09545 e52bf3c5f107043c6625b7ebc0b5d476 250 Pfam PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase 13 231 4.6E-56 T 22-04-2016 IPR001228 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase GO:0008299|GO:0050518 KEGG: 00900+2.7.7.60|MetaCyc: PWY-7560|UniPathway: UPA00056 SRM_RS09545 e52bf3c5f107043c6625b7ebc0b5d476 250 Gene3D G3DSA:3.90.550.10 12 232 1.7E-60 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases SRM_RS09545 e52bf3c5f107043c6625b7ebc0b5d476 250 PANTHER PTHR32125 9 247 7.9E-57 T 22-04-2016 SRM_RS09545 e52bf3c5f107043c6625b7ebc0b5d476 250 TIGRFAM TIGR00453 ispD: 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase 15 231 4.4E-59 T 22-04-2016 IPR001228 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase GO:0008299|GO:0050518 KEGG: 00900+2.7.7.60|MetaCyc: PWY-7560|UniPathway: UPA00056 SRM_RS09545 e52bf3c5f107043c6625b7ebc0b5d476 250 Hamap MF_00108 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase [ispD]. 12 235 28.078 T 22-04-2016 IPR001228 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase GO:0008299|GO:0050518 KEGG: 00900+2.7.7.60|MetaCyc: PWY-7560|UniPathway: UPA00056 SRM_RS09545 e52bf3c5f107043c6625b7ebc0b5d476 250 ProSitePatterns PS01295 4-diphosphocytidyl-2C-methyl-D-erythritol synthase signature. 110 117 - T 22-04-2016 IPR018294 4-diphosphocytidyl-2C-methyl-D-erythritol synthase, conserved site GO:0003824|GO:0008299 KEGG: 00900+2.7.7.60|MetaCyc: PWY-7560|UniPathway: UPA00056 SRM_RS09545 e52bf3c5f107043c6625b7ebc0b5d476 250 PANTHER PTHR32125:SF4 9 247 7.9E-57 T 22-04-2016 SRM_RS04915 bf7b6db8d3e27fa51c25f92aa0a598c5 290 Pfam PF03881 Fructosamine kinase 16 286 7.1E-82 T 22-04-2016 IPR016477 Fructosamine/Ketosamine-3-kinase SRM_RS04915 bf7b6db8d3e27fa51c25f92aa0a598c5 290 PANTHER PTHR12149 1 287 7.4E-94 T 22-04-2016 SRM_RS04915 bf7b6db8d3e27fa51c25f92aa0a598c5 290 PIRSF PIRSF006221 2 289 4.7E-79 T 22-04-2016 IPR016477 Fructosamine/Ketosamine-3-kinase SRM_RS04915 bf7b6db8d3e27fa51c25f92aa0a598c5 290 Gene3D G3DSA:3.90.1200.10 95 265 2.7E-13 T 22-04-2016 SRM_RS04915 bf7b6db8d3e27fa51c25f92aa0a598c5 290 PANTHER PTHR12149:SF8 1 287 7.4E-94 T 22-04-2016 SRM_RS04915 bf7b6db8d3e27fa51c25f92aa0a598c5 290 SUPERFAMILY SSF56112 4 286 4.67E-44 T 22-04-2016 IPR011009 Protein kinase-like domain SRM_RS01890 8326e4280f2823bb9828a49d126c35da 316 Gene3D G3DSA:3.90.550.10 3 235 8.7E-57 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases SRM_RS01890 8326e4280f2823bb9828a49d126c35da 316 Pfam PF00535 Glycosyl transferase family 2 3 165 1.5E-31 T 22-04-2016 IPR001173 Glycosyltransferase 2-like SRM_RS01890 8326e4280f2823bb9828a49d126c35da 316 SUPERFAMILY SSF53448 3 207 3.84E-56 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases SRM_RS01890 8326e4280f2823bb9828a49d126c35da 316 PANTHER PTHR22916 3 283 8.0E-55 T 22-04-2016 SRM_RS13090 6b716f0c121331dd61b1ac613a6a457a 224 SUPERFAMILY SSF53335 24 201 4.14E-36 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SRM_RS13090 6b716f0c121331dd61b1ac613a6a457a 224 PANTHER PTHR10108 13 154 5.7E-28 T 22-04-2016 SRM_RS13090 6b716f0c121331dd61b1ac613a6a457a 224 Pfam PF08241 Methyltransferase domain 60 151 4.8E-21 T 22-04-2016 IPR013216 Methyltransferase type 11 GO:0008152|GO:0008168 SRM_RS13090 6b716f0c121331dd61b1ac613a6a457a 224 Gene3D G3DSA:3.40.50.150 22 161 4.6E-34 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SRM_RS03320 2540f2390244ba7bfa03d41d9c77b6a1 375 PANTHER PTHR21499:SF29 105 367 3.1E-52 T 22-04-2016 SRM_RS03320 2540f2390244ba7bfa03d41d9c77b6a1 375 PANTHER PTHR21499 105 367 3.1E-52 T 22-04-2016 SRM_RS03320 2540f2390244ba7bfa03d41d9c77b6a1 375 SUPERFAMILY SSF55347 167 349 2.75E-41 T 22-04-2016 SRM_RS03320 2540f2390244ba7bfa03d41d9c77b6a1 375 Gene3D G3DSA:3.40.50.720 23 188 6.6E-46 T 22-04-2016 IPR016040 NAD(P)-binding domain SRM_RS03320 2540f2390244ba7bfa03d41d9c77b6a1 375 Pfam PF00742 Homoserine dehydrogenase 167 362 9.7E-45 T 22-04-2016 IPR001342 Homoserine dehydrogenase, catalytic GO:0006520|GO:0055114 KEGG: 00260+1.1.1.3|KEGG: 00270+1.1.1.3|KEGG: 00300+1.1.1.3|UniPathway: UPA00050|UniPathway: UPA00051 SRM_RS03320 2540f2390244ba7bfa03d41d9c77b6a1 375 SUPERFAMILY SSF51735 22 189 6.67E-27 T 22-04-2016 IPR016040 NAD(P)-binding domain SRM_RS03320 2540f2390244ba7bfa03d41d9c77b6a1 375 Pfam PF03447 Homoserine dehydrogenase, NAD binding domain 30 159 7.1E-18 T 22-04-2016 IPR005106 Aspartate/homoserine dehydrogenase, NAD-binding GO:0016491|GO:0050661|GO:0055114 SRM_RS03320 2540f2390244ba7bfa03d41d9c77b6a1 375 PIRSF PIRSF036497 21 370 2.2E-68 T 22-04-2016 IPR022697 Homoserine dehydrogenase lacking ACT domain GO:0004412 KEGG: 00260+1.1.1.3|KEGG: 00270+1.1.1.3|KEGG: 00300+1.1.1.3|UniPathway: UPA00050|UniPathway: UPA00051 SRM_RS03320 2540f2390244ba7bfa03d41d9c77b6a1 375 Gene3D G3DSA:3.30.360.10 189 344 2.3E-44 T 22-04-2016 SRM_RS02260 0fa6d6f64fc63318509a2066a0f50e1f 504 PANTHER PTHR22953:SF27 118 339 1.2E-17 T 22-04-2016 SRM_RS02260 0fa6d6f64fc63318509a2066a0f50e1f 504 Pfam PF00149 Calcineurin-like phosphoesterase 132 337 1.8E-8 T 22-04-2016 IPR004843 Calcineurin-like phosphoesterase domain, apaH type GO:0016787 SRM_RS02260 0fa6d6f64fc63318509a2066a0f50e1f 504 SUPERFAMILY SSF56300 132 388 1.33E-37 T 22-04-2016 IPR029052 Metallo-dependent phosphatase-like SRM_RS02260 0fa6d6f64fc63318509a2066a0f50e1f 504 TIGRFAM TIGR01409 TAT_signal_seq: Tat (twin-arginine translocation) pathway signal sequence 4 22 6.9E-5 T 22-04-2016 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal SRM_RS02260 0fa6d6f64fc63318509a2066a0f50e1f 504 Gene3D G3DSA:3.60.21.10 126 395 2.6E-36 T 22-04-2016 IPR029052 Metallo-dependent phosphatase-like SRM_RS02260 0fa6d6f64fc63318509a2066a0f50e1f 504 Pfam PF16371 N terminal of Calcineurin-like phosphoesterase 42 119 1.5E-19 T 22-04-2016 IPR032285 Calcineurin-like phosphoesterase, N-terminal SRM_RS02260 0fa6d6f64fc63318509a2066a0f50e1f 504 Pfam PF16370 C terminal of Calcineurin-like phosphoesterase 348 495 3.4E-44 T 22-04-2016 IPR032288 Calcineurin-like phosphoesterase, C-terminal SRM_RS02260 0fa6d6f64fc63318509a2066a0f50e1f 504 PANTHER PTHR22953 118 339 1.2E-17 T 22-04-2016 SRM_RS04720 4aec5e747fe472e6a8dd854c888e2a6e 88 Pfam PF10571 Uncharacterised protein family UPF0547 6 29 9.9E-8 T 22-04-2016 IPR018886 Uncharacterised domain UPF0547 SRM_RS04720 4aec5e747fe472e6a8dd854c888e2a6e 88 ProDom PD057827 ZN-RIBBON HI1126 PM0127 TRANSMEMBRANE ORF196EGC129 MEMBRANE SO2423 GLL0157 1 28 7.0E-5 T 22-04-2016 SRM_RS04320 442f13c46e70a4da9c6395c79f48d44e 141 Gene3D G3DSA:3.90.350.10 24 58 3.0E-7 T 22-04-2016 IPR014736 Transposase, Tn5-like, core SRM_RS04320 442f13c46e70a4da9c6395c79f48d44e 141 Pfam PF01609 Transposase DDE domain 27 75 1.6E-8 T 22-04-2016 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 SRM_RS04320 442f13c46e70a4da9c6395c79f48d44e 141 SUPERFAMILY SSF53098 26 88 2.88E-12 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 SRM_RS16090 c6c8d2007f9a8f0b181999976531e094 204 PANTHER PTHR35091 114 204 3.6E-19 T 22-04-2016 SRM_RS16090 c6c8d2007f9a8f0b181999976531e094 204 Pfam PF03748 Flagellar basal body-associated protein FliL 111 204 1.8E-21 T 22-04-2016 IPR005503 Flagellar basal body-associated protein FliL GO:0006935|GO:0009425|GO:0071973 SRM_RS05240 0c78eb9f064114d4d90635d3e16d8127 416 PANTHER PTHR31964:SF26 264 405 6.0E-34 T 22-04-2016 SRM_RS05240 0c78eb9f064114d4d90635d3e16d8127 416 Gene3D G3DSA:3.40.50.620 116 251 1.5E-29 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold SRM_RS05240 0c78eb9f064114d4d90635d3e16d8127 416 Pfam PF00582 Universal stress protein family 121 252 5.8E-26 T 22-04-2016 IPR006016 UspA GO:0006950 SRM_RS05240 0c78eb9f064114d4d90635d3e16d8127 416 Pfam PF00582 Universal stress protein family 264 405 2.1E-34 T 22-04-2016 IPR006016 UspA GO:0006950 SRM_RS05240 0c78eb9f064114d4d90635d3e16d8127 416 PRINTS PR01438 Universal stress protein signature 365 377 6.7E-17 T 22-04-2016 IPR006015 Universal stress protein A SRM_RS05240 0c78eb9f064114d4d90635d3e16d8127 416 PRINTS PR01438 Universal stress protein signature 383 405 6.7E-17 T 22-04-2016 IPR006015 Universal stress protein A SRM_RS05240 0c78eb9f064114d4d90635d3e16d8127 416 PRINTS PR01438 Universal stress protein signature 265 283 6.7E-17 T 22-04-2016 IPR006015 Universal stress protein A SRM_RS05240 0c78eb9f064114d4d90635d3e16d8127 416 PANTHER PTHR31964 264 405 6.0E-34 T 22-04-2016 SRM_RS05240 0c78eb9f064114d4d90635d3e16d8127 416 Gene3D G3DSA:3.40.50.620 261 406 2.7E-41 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold SRM_RS05240 0c78eb9f064114d4d90635d3e16d8127 416 SUPERFAMILY SSF52402 264 405 7.2E-37 T 22-04-2016 SRM_RS05240 0c78eb9f064114d4d90635d3e16d8127 416 SUPERFAMILY SSF52402 121 253 1.12E-27 T 22-04-2016 SRM_RS02915 407718d67be72c80fd8d19de834d0415 579 SUPERFAMILY SSF54862 100 236 3.47E-29 T 22-04-2016 SRM_RS02915 407718d67be72c80fd8d19de834d0415 579 ProSitePatterns PS00643 Respiratory-chain NADH dehydrogenase 75 Kd subunit signature 3. 170 180 - T 22-04-2016 IPR000283 NADH:ubiquinone oxidoreductase, 75kDa subunit, conserved site GO:0008137|GO:0016020|GO:0042773|GO:0055114 SRM_RS02915 407718d67be72c80fd8d19de834d0415 579 SUPERFAMILY SSF53706 514 563 2.73E-43 T 22-04-2016 SRM_RS02915 407718d67be72c80fd8d19de834d0415 579 SUPERFAMILY SSF53706 238 482 2.73E-43 T 22-04-2016 SRM_RS02915 407718d67be72c80fd8d19de834d0415 579 Pfam PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region 109 146 3.2E-14 T 22-04-2016 IPR019574 NADH:ubiquinone oxidoreductase, subunit G, iron-sulphur binding GO:0016491|GO:0055114 SRM_RS02915 407718d67be72c80fd8d19de834d0415 579 SUPERFAMILY SSF54292 1 96 8.76E-17 T 22-04-2016 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 SRM_RS02915 407718d67be72c80fd8d19de834d0415 579 SMART SM00929 107 147 1.9E-16 T 22-04-2016 IPR019574 NADH:ubiquinone oxidoreductase, subunit G, iron-sulphur binding GO:0016491|GO:0055114 SRM_RS02915 407718d67be72c80fd8d19de834d0415 579 PANTHER PTHR11615:SF38 3 51 2.1E-69 T 22-04-2016 SRM_RS02915 407718d67be72c80fd8d19de834d0415 579 PANTHER PTHR11615:SF38 521 558 2.1E-69 T 22-04-2016 SRM_RS02915 407718d67be72c80fd8d19de834d0415 579 PANTHER PTHR11615:SF38 74 489 2.1E-69 T 22-04-2016 SRM_RS02915 407718d67be72c80fd8d19de834d0415 579 Gene3D G3DSA:3.40.50.740 298 358 2.6E-6 T 22-04-2016 SRM_RS02915 407718d67be72c80fd8d19de834d0415 579 Gene3D G3DSA:3.40.50.740 403 482 4.3E-16 T 22-04-2016 SRM_RS02915 407718d67be72c80fd8d19de834d0415 579 Gene3D G3DSA:3.40.50.740 514 565 4.3E-16 T 22-04-2016 SRM_RS02915 407718d67be72c80fd8d19de834d0415 579 Gene3D G3DSA:3.10.20.30 7 104 9.4E-6 T 22-04-2016 IPR012675 Beta-grasp domain SRM_RS02915 407718d67be72c80fd8d19de834d0415 579 ProSitePatterns PS00641 Respiratory-chain NADH dehydrogenase 75 Kd subunit signature 1. 31 48 - T 22-04-2016 IPR000283 NADH:ubiquinone oxidoreductase, 75kDa subunit, conserved site GO:0008137|GO:0016020|GO:0042773|GO:0055114 SRM_RS02915 407718d67be72c80fd8d19de834d0415 579 Pfam PF13510 2Fe-2S iron-sulfur cluster binding domain 4 97 2.7E-8 T 22-04-2016 SRM_RS02915 407718d67be72c80fd8d19de834d0415 579 PANTHER PTHR11615 3 51 2.1E-69 T 22-04-2016 SRM_RS02915 407718d67be72c80fd8d19de834d0415 579 PANTHER PTHR11615 521 558 2.1E-69 T 22-04-2016 SRM_RS02915 407718d67be72c80fd8d19de834d0415 579 PANTHER PTHR11615 74 489 2.1E-69 T 22-04-2016 SRM_RS06185 1fbdbc5bee6b145eeb0d08b7ea2a07ee 380 Gene3D G3DSA:3.20.20.150 1 375 3.5E-59 T 22-04-2016 IPR013022 Xylose isomerase-like, TIM barrel domain SRM_RS06185 1fbdbc5bee6b145eeb0d08b7ea2a07ee 380 SUPERFAMILY SSF51658 5 366 2.05E-44 T 22-04-2016 IPR013022 Xylose isomerase-like, TIM barrel domain SRM_RS04240 e7669d3c6443c9bd6f344d8afdd27128 123 SUPERFAMILY SSF50118 4 113 8.28E-11 T 22-04-2016 IPR011067 Plasmid maintenance toxin/Cell growth inhibitor SRM_RS04240 e7669d3c6443c9bd6f344d8afdd27128 123 Gene3D G3DSA:2.30.30.110 5 112 2.3E-4 T 22-04-2016 IPR011067 Plasmid maintenance toxin/Cell growth inhibitor SRM_RS04240 e7669d3c6443c9bd6f344d8afdd27128 123 Pfam PF02452 PemK-like, MazF-like toxin of type II toxin-antitoxin system 4 110 7.4E-10 T 22-04-2016 IPR003477 mRNA interferase PemK-like protein GO:0003677 SRM_RS03540 887ba3a4dc581c131777a581100838fa 109 Pfam PF12732 YtxH-like protein 16 92 4.6E-13 T 22-04-2016 IPR024623 Uncharacterised protein family YtxH SRM_RS01740 fe8ec1c6976b6c4af56c03422184102f 129 PANTHER PTHR30007 5 113 2.1E-39 T 22-04-2016 SRM_RS01740 fe8ec1c6976b6c4af56c03422184102f 129 Pfam PF13340 Putative transposase of IS4/5 family (DUF4096) 8 79 5.5E-30 T 22-04-2016 IPR025161 Putative transposase IS4/IS5 family SRM_RS01740 fe8ec1c6976b6c4af56c03422184102f 129 PANTHER PTHR30007:SF18 5 113 2.1E-39 T 22-04-2016 SRM_RS05350 e22fdbc96c80365460edeb556794fad5 280 SUPERFAMILY SSF53335 50 260 6.37E-42 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SRM_RS05350 e22fdbc96c80365460edeb556794fad5 280 PANTHER PTHR18895:SF3 71 271 1.2E-46 T 22-04-2016 SRM_RS05350 e22fdbc96c80365460edeb556794fad5 280 Gene3D G3DSA:3.40.50.150 108 269 9.4E-36 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SRM_RS05350 e22fdbc96c80365460edeb556794fad5 280 Hamap MF_00735 Ribosomal protein L11 methyltransferase [prmA]. 3 276 27.536 T 22-04-2016 IPR004498 Ribosomal protein L11 methyltransferase GO:0006479|GO:0008276 SRM_RS05350 e22fdbc96c80365460edeb556794fad5 280 PANTHER PTHR18895 71 271 1.2E-46 T 22-04-2016 SRM_RS05350 e22fdbc96c80365460edeb556794fad5 280 Pfam PF06325 Ribosomal protein L11 methyltransferase (PrmA) 27 271 2.7E-54 T 22-04-2016 SRM_RS04655 2b6244cc1b07154764be2fcb68f532dc 453 SUPERFAMILY SSF56300 214 371 1.22E-47 T 22-04-2016 IPR029052 Metallo-dependent phosphatase-like SRM_RS04655 2b6244cc1b07154764be2fcb68f532dc 453 SUPERFAMILY SSF56300 25 183 1.22E-47 T 22-04-2016 IPR029052 Metallo-dependent phosphatase-like SRM_RS04655 2b6244cc1b07154764be2fcb68f532dc 453 PANTHER PTHR30337:SF0 23 451 8.3E-49 T 22-04-2016 SRM_RS04655 2b6244cc1b07154764be2fcb68f532dc 453 Gene3D G3DSA:3.60.21.10 24 318 2.6E-49 T 22-04-2016 IPR029052 Metallo-dependent phosphatase-like SRM_RS04655 2b6244cc1b07154764be2fcb68f532dc 453 PANTHER PTHR30337 23 451 8.3E-49 T 22-04-2016 SRM_RS04655 2b6244cc1b07154764be2fcb68f532dc 453 TIGRFAM TIGR00619 sbcd: exonuclease SbcCD, D subunit 25 303 8.7E-39 T 22-04-2016 IPR004593 Nuclease SbcCD subunit D GO:0004519|GO:0006259|GO:0008408 SRM_RS04655 2b6244cc1b07154764be2fcb68f532dc 453 Pfam PF00149 Calcineurin-like phosphoesterase 24 273 9.9E-13 T 22-04-2016 IPR004843 Calcineurin-like phosphoesterase domain, apaH type GO:0016787 SRM_RS04700 9849bb998c06aa97191848d40ac5644c 848 PANTHER PTHR30287 3 848 2.1E-99 T 22-04-2016 SRM_RS04700 9849bb998c06aa97191848d40ac5644c 848 Pfam PF02687 FtsX-like permease family 726 838 3.2E-14 T 22-04-2016 IPR003838 ABC transporter permease protein domain GO:0016020 SRM_RS04700 9849bb998c06aa97191848d40ac5644c 848 Pfam PF02687 FtsX-like permease family 260 378 4.7E-15 T 22-04-2016 IPR003838 ABC transporter permease protein domain GO:0016020 SRM_RS04700 9849bb998c06aa97191848d40ac5644c 848 Pfam PF12704 MacB-like periplasmic core domain 24 196 1.9E-11 T 22-04-2016 IPR025857 MacB-like periplasmic core domain SRM_RS05545 be6cc9de030df6a2f14dd337fa0a5fab 288 SMART SM00327 12 244 8.8E-8 T 22-04-2016 IPR002035 von Willebrand factor, type A SRM_RS05545 be6cc9de030df6a2f14dd337fa0a5fab 288 SUPERFAMILY SSF53300 14 242 8.41E-14 T 22-04-2016 IPR002035 von Willebrand factor, type A SRM_RS05545 be6cc9de030df6a2f14dd337fa0a5fab 288 Gene3D G3DSA:3.40.50.410 10 94 3.6E-10 T 22-04-2016 IPR002035 von Willebrand factor, type A SRM_RS05545 be6cc9de030df6a2f14dd337fa0a5fab 288 Gene3D G3DSA:3.40.50.410 128 194 3.6E-10 T 22-04-2016 IPR002035 von Willebrand factor, type A SRM_RS06005 006161a946c732c669bc4fef625b8795 167 SUPERFAMILY SSF56925 76 165 1.73E-12 T 22-04-2016 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 SRM_RS06005 006161a946c732c669bc4fef625b8795 167 Pfam PF09411 Lipid A 3-O-deacylase (PagL) 79 163 2.6E-10 T 22-04-2016 IPR018550 Lipid A 3-O-deacylase-related SRM_RS06005 006161a946c732c669bc4fef625b8795 167 Gene3D G3DSA:2.40.160.20 61 164 3.5E-16 T 22-04-2016 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 SRM_RS06930 3430e7f307090a31f860aabcb2f03029 504 TIGRFAM TIGR02395 rpoN_sigma: RNA polymerase sigma-54 factor 12 492 1.2E-135 T 22-04-2016 IPR000394 RNA polymerase sigma factor 54 GO:0003677|GO:0003700|GO:0003899|GO:0006352|GO:0006355|GO:0016987 SRM_RS06930 3430e7f307090a31f860aabcb2f03029 504 Pfam PF04963 Sigma-54 factor, core binding domain 119 310 2.9E-53 T 22-04-2016 IPR007046 RNA polymerase sigma factor 54, core-binding GO:0003677|GO:0006352 SRM_RS06930 3430e7f307090a31f860aabcb2f03029 504 Pfam PF04552 Sigma-54, DNA binding domain 335 492 5.3E-58 T 22-04-2016 IPR007634 RNA polymerase sigma factor 54, DNA-binding SRM_RS06930 3430e7f307090a31f860aabcb2f03029 504 PANTHER PTHR32248 3 495 7.5E-142 T 22-04-2016 SRM_RS06930 3430e7f307090a31f860aabcb2f03029 504 Pfam PF00309 Sigma-54 factor, Activator interacting domain (AID) 8 52 2.9E-15 T 22-04-2016 IPR000394 RNA polymerase sigma factor 54 GO:0003677|GO:0003700|GO:0003899|GO:0006352|GO:0006355|GO:0016987 SRM_RS06930 3430e7f307090a31f860aabcb2f03029 504 PRINTS PR00045 Sigma-54 factor signature 192 209 4.1E-24 T 22-04-2016 IPR000394 RNA polymerase sigma factor 54 GO:0003677|GO:0003700|GO:0003899|GO:0006352|GO:0006355|GO:0016987 SRM_RS06930 3430e7f307090a31f860aabcb2f03029 504 PRINTS PR00045 Sigma-54 factor signature 410 421 4.1E-24 T 22-04-2016 IPR000394 RNA polymerase sigma factor 54 GO:0003677|GO:0003700|GO:0003899|GO:0006352|GO:0006355|GO:0016987 SRM_RS06930 3430e7f307090a31f860aabcb2f03029 504 PRINTS PR00045 Sigma-54 factor signature 394 406 4.1E-24 T 22-04-2016 IPR000394 RNA polymerase sigma factor 54 GO:0003677|GO:0003700|GO:0003899|GO:0006352|GO:0006355|GO:0016987 SRM_RS06930 3430e7f307090a31f860aabcb2f03029 504 PRINTS PR00045 Sigma-54 factor signature 468 486 4.1E-24 T 22-04-2016 IPR000394 RNA polymerase sigma factor 54 GO:0003677|GO:0003700|GO:0003899|GO:0006352|GO:0006355|GO:0016987 SRM_RS06930 3430e7f307090a31f860aabcb2f03029 504 PIRSF PIRSF000774 2 495 3.7E-170 T 22-04-2016 IPR000394 RNA polymerase sigma factor 54 GO:0003677|GO:0003700|GO:0003899|GO:0006352|GO:0006355|GO:0016987 SRM_RS06930 3430e7f307090a31f860aabcb2f03029 504 PANTHER PTHR32248:SF4 3 495 7.5E-142 T 22-04-2016 SRM_RS03090 7b74e969a99b9ca1dc8229ae2344b0d5 431 SUPERFAMILY SSF56935 61 343 2.2E-8 T 22-04-2016 SRM_RS06010 bc3530c761b1bfbf15c08e12cd20be89 258 PRINTS PR00412 Epoxide hydrolase signature 96 109 3.4E-6 T 22-04-2016 IPR000639 Epoxide hydrolase-like GO:0003824 SRM_RS06010 bc3530c761b1bfbf15c08e12cd20be89 258 PRINTS PR00412 Epoxide hydrolase signature 39 54 3.4E-6 T 22-04-2016 IPR000639 Epoxide hydrolase-like GO:0003824 SRM_RS06010 bc3530c761b1bfbf15c08e12cd20be89 258 PRINTS PR00412 Epoxide hydrolase signature 230 252 3.4E-6 T 22-04-2016 IPR000639 Epoxide hydrolase-like GO:0003824 SRM_RS06010 bc3530c761b1bfbf15c08e12cd20be89 258 SUPERFAMILY SSF53474 4 254 4.9E-52 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold SRM_RS06010 bc3530c761b1bfbf15c08e12cd20be89 258 PANTHER PTHR10992:SF768 1 255 8.0E-84 T 22-04-2016 SRM_RS06010 bc3530c761b1bfbf15c08e12cd20be89 258 PRINTS PR00111 Alpha/beta hydrolase fold signature 82 95 4.8E-7 T 22-04-2016 IPR000073 Alpha/beta hydrolase fold-1 SRM_RS06010 bc3530c761b1bfbf15c08e12cd20be89 258 PRINTS PR00111 Alpha/beta hydrolase fold signature 39 54 4.8E-7 T 22-04-2016 IPR000073 Alpha/beta hydrolase fold-1 SRM_RS06010 bc3530c761b1bfbf15c08e12cd20be89 258 PRINTS PR00111 Alpha/beta hydrolase fold signature 96 109 4.8E-7 T 22-04-2016 IPR000073 Alpha/beta hydrolase fold-1 SRM_RS06010 bc3530c761b1bfbf15c08e12cd20be89 258 PANTHER PTHR10992 1 255 8.0E-84 T 22-04-2016 SRM_RS06010 bc3530c761b1bfbf15c08e12cd20be89 258 Gene3D G3DSA:3.40.50.1820 3 255 1.5E-52 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold SRM_RS06010 bc3530c761b1bfbf15c08e12cd20be89 258 Pfam PF00561 alpha/beta hydrolase fold 13 137 5.8E-23 T 22-04-2016 IPR000073 Alpha/beta hydrolase fold-1 SRM_RS09940 b21d4ca701f3eb7111df3ddf55ec35e2 810 PANTHER PTHR30572:SF4 287 354 2.8E-43 T 22-04-2016 SRM_RS09940 b21d4ca701f3eb7111df3ddf55ec35e2 810 PANTHER PTHR30572:SF4 421 810 2.8E-43 T 22-04-2016 SRM_RS09940 b21d4ca701f3eb7111df3ddf55ec35e2 810 PANTHER PTHR30572 287 354 2.8E-43 T 22-04-2016 SRM_RS09940 b21d4ca701f3eb7111df3ddf55ec35e2 810 PANTHER PTHR30572 421 810 2.8E-43 T 22-04-2016 SRM_RS09940 b21d4ca701f3eb7111df3ddf55ec35e2 810 Pfam PF02687 FtsX-like permease family 290 406 7.6E-19 T 22-04-2016 IPR003838 ABC transporter permease protein domain GO:0016020 SRM_RS09940 b21d4ca701f3eb7111df3ddf55ec35e2 810 Pfam PF02687 FtsX-like permease family 691 799 5.1E-13 T 22-04-2016 IPR003838 ABC transporter permease protein domain GO:0016020 SRM_RS09940 b21d4ca701f3eb7111df3ddf55ec35e2 810 Pfam PF12704 MacB-like periplasmic core domain 20 240 7.8E-19 T 22-04-2016 IPR025857 MacB-like periplasmic core domain SRM_RS14700 4d12fb4187740142affbd95074f9dc19 361 Pfam PF01112 Asparaginase 59 302 1.0E-60 T 22-04-2016 IPR000246 Peptidase T2, asparaginase 2 GO:0016787 SRM_RS14700 4d12fb4187740142affbd95074f9dc19 361 SUPERFAMILY SSF56235 53 303 1.03E-63 T 22-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal SRM_RS14700 4d12fb4187740142affbd95074f9dc19 361 TIGRFAM TIGR01409 TAT_signal_seq: Tat (twin-arginine translocation) pathway signal sequence 11 33 2.7E-4 T 22-04-2016 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal SRM_RS14700 4d12fb4187740142affbd95074f9dc19 361 PANTHER PTHR10188 59 301 4.2E-64 T 22-04-2016 IPR000246 Peptidase T2, asparaginase 2 GO:0016787 SRM_RS06050 62cf7def4f48fbe3252f221d03893c4d 361 Gene3D G3DSA:3.60.10.10 65 356 3.9E-12 T 22-04-2016 IPR005135 Endonuclease/exonuclease/phosphatase SRM_RS06050 62cf7def4f48fbe3252f221d03893c4d 361 Pfam PF03372 Endonuclease/Exonuclease/phosphatase family 70 349 9.2E-18 T 22-04-2016 IPR005135 Endonuclease/exonuclease/phosphatase SRM_RS06050 62cf7def4f48fbe3252f221d03893c4d 361 SUPERFAMILY SSF56219 66 356 4.58E-35 T 22-04-2016 IPR005135 Endonuclease/exonuclease/phosphatase SRM_RS03970 a3a4d25c7a5bae91cb2c818d2ae76ab5 358 PANTHER PTHR23416 4 301 2.6E-126 T 22-04-2016 SRM_RS03970 a3a4d25c7a5bae91cb2c818d2ae76ab5 358 SUPERFAMILY SSF51569 4 301 1.65E-86 T 22-04-2016 SRM_RS03970 a3a4d25c7a5bae91cb2c818d2ae76ab5 358 SMART SM00858 292 350 1.7E-9 T 22-04-2016 IPR013974 SAF domain SRM_RS03970 a3a4d25c7a5bae91cb2c818d2ae76ab5 358 Gene3D G3DSA:3.20.20.70 7 276 2.3E-102 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 SRM_RS03970 a3a4d25c7a5bae91cb2c818d2ae76ab5 358 Pfam PF03102 NeuB family 37 276 2.0E-90 T 22-04-2016 IPR013132 N-acetylneuraminic acid synthase, N-terminal GO:0016051 SRM_RS03970 a3a4d25c7a5bae91cb2c818d2ae76ab5 358 Gene3D G3DSA:3.90.1210.10 293 352 3.0E-13 T 22-04-2016 IPR006190 Antifreeze-like/N-acetylneuraminic acid synthase C-terminal SRM_RS03970 a3a4d25c7a5bae91cb2c818d2ae76ab5 358 SUPERFAMILY SSF51269 284 349 4.71E-13 T 22-04-2016 IPR006190 Antifreeze-like/N-acetylneuraminic acid synthase C-terminal SRM_RS03970 a3a4d25c7a5bae91cb2c818d2ae76ab5 358 PANTHER PTHR23416:SF62 4 301 2.6E-126 T 22-04-2016 SRM_RS03970 a3a4d25c7a5bae91cb2c818d2ae76ab5 358 Pfam PF08666 SAF domain 293 349 9.4E-10 T 22-04-2016 IPR013974 SAF domain SRM_RS04435 780a7f84fca5c65777dba09d5b5ab9f4 168 SUPERFAMILY SSF52980 29 163 2.68E-19 T 22-04-2016 IPR011335 Restriction endonuclease type II-like SRM_RS04435 780a7f84fca5c65777dba09d5b5ab9f4 168 Pfam PF05685 Putative restriction endonuclease 29 144 2.0E-15 T 22-04-2016 IPR008538 Domain of unknown function DUF820 SRM_RS04435 780a7f84fca5c65777dba09d5b5ab9f4 168 Gene3D G3DSA:3.90.1570.10 29 146 1.3E-18 T 22-04-2016 IPR012296 Nuclease, putative, TT1808 SRM_RS02070 a22daa610fac773f9ae56d1f0fd539a1 540 Gene3D G3DSA:3.40.720.10 453 528 2.2E-142 T 22-04-2016 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 SRM_RS02070 a22daa610fac773f9ae56d1f0fd539a1 540 Gene3D G3DSA:3.40.720.10 66 396 2.2E-142 T 22-04-2016 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 SRM_RS02070 a22daa610fac773f9ae56d1f0fd539a1 540 PANTHER PTHR11596:SF47 475 537 1.7E-145 T 22-04-2016 SRM_RS02070 a22daa610fac773f9ae56d1f0fd539a1 540 PANTHER PTHR11596:SF47 99 451 1.7E-145 T 22-04-2016 SRM_RS02070 a22daa610fac773f9ae56d1f0fd539a1 540 SMART SM00098 98 525 2.8E-102 T 22-04-2016 IPR001952 Alkaline phosphatase GO:0008152|GO:0016791 KEGG: 00627+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 SRM_RS02070 a22daa610fac773f9ae56d1f0fd539a1 540 ProSitePatterns PS00123 Alkaline phosphatase active site. 148 156 - T 22-04-2016 IPR018299 Alkaline phosphatase, active site GO:0016791 KEGG: 00627+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 SRM_RS02070 a22daa610fac773f9ae56d1f0fd539a1 540 Pfam PF00245 Alkaline phosphatase 99 522 2.5E-105 T 22-04-2016 IPR001952 Alkaline phosphatase GO:0008152|GO:0016791 KEGG: 00627+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 SRM_RS02070 a22daa610fac773f9ae56d1f0fd539a1 540 PANTHER PTHR11596 475 537 1.7E-145 T 22-04-2016 SRM_RS02070 a22daa610fac773f9ae56d1f0fd539a1 540 PANTHER PTHR11596 99 451 1.7E-145 T 22-04-2016 SRM_RS02070 a22daa610fac773f9ae56d1f0fd539a1 540 PRINTS PR00113 Alkaline phosphatase signature 148 163 6.4E-39 T 22-04-2016 IPR001952 Alkaline phosphatase GO:0008152|GO:0016791 KEGG: 00627+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 SRM_RS02070 a22daa610fac773f9ae56d1f0fd539a1 540 PRINTS PR00113 Alkaline phosphatase signature 310 339 6.4E-39 T 22-04-2016 IPR001952 Alkaline phosphatase GO:0008152|GO:0016791 KEGG: 00627+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 SRM_RS02070 a22daa610fac773f9ae56d1f0fd539a1 540 PRINTS PR00113 Alkaline phosphatase signature 229 239 6.4E-39 T 22-04-2016 IPR001952 Alkaline phosphatase GO:0008152|GO:0016791 KEGG: 00627+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 SRM_RS02070 a22daa610fac773f9ae56d1f0fd539a1 540 PRINTS PR00113 Alkaline phosphatase signature 185 205 6.4E-39 T 22-04-2016 IPR001952 Alkaline phosphatase GO:0008152|GO:0016791 KEGG: 00627+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 SRM_RS02070 a22daa610fac773f9ae56d1f0fd539a1 540 PRINTS PR00113 Alkaline phosphatase signature 97 117 6.4E-39 T 22-04-2016 IPR001952 Alkaline phosphatase GO:0008152|GO:0016791 KEGG: 00627+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 SRM_RS02070 a22daa610fac773f9ae56d1f0fd539a1 540 SUPERFAMILY SSF53649 466 528 1.61E-129 T 22-04-2016 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 SRM_RS02070 a22daa610fac773f9ae56d1f0fd539a1 540 SUPERFAMILY SSF53649 76 430 1.61E-129 T 22-04-2016 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 SRM_RS09855 d5850f5c4f80a300248ca7af87f9be9e 199 PANTHER PTHR22573 34 198 8.0E-61 T 22-04-2016 SRM_RS09855 d5850f5c4f80a300248ca7af87f9be9e 199 SUPERFAMILY SSF53271 27 197 9.31E-46 T 22-04-2016 IPR029057 Phosphoribosyltransferase-like SRM_RS09855 d5850f5c4f80a300248ca7af87f9be9e 199 Gene3D G3DSA:3.40.50.2020 9 198 8.8E-67 T 22-04-2016 IPR029057 Phosphoribosyltransferase-like SRM_RS09855 d5850f5c4f80a300248ca7af87f9be9e 199 Pfam PF00156 Phosphoribosyl transferase domain 32 183 1.0E-20 T 22-04-2016 IPR000836 Phosphoribosyltransferase domain GO:0009116 SRM_RS09855 d5850f5c4f80a300248ca7af87f9be9e 199 TIGRFAM TIGR01203 HGPRTase: hypoxanthine phosphoribosyltransferase 34 196 3.9E-55 T 22-04-2016 IPR005904 Hypoxanthine phosphoribosyl transferase GO:0004422|GO:0005737|GO:0006166 KEGG: 00230+2.4.2.8|KEGG: 00983+2.4.2.8|MetaCyc: PWY-6599|MetaCyc: PWY-6609|MetaCyc: PWY-6610|MetaCyc: PWY-6620|UniPathway: UPA00591 SRM_RS09855 d5850f5c4f80a300248ca7af87f9be9e 199 PANTHER PTHR22573:SF56 34 198 8.0E-61 T 22-04-2016 SRM_RS12825 282bf430f5852930f65850a33df602a9 140 Pfam PF02566 OsmC-like protein 35 128 2.3E-16 T 22-04-2016 IPR003718 OsmC/Ohr family SRM_RS12825 282bf430f5852930f65850a33df602a9 140 PANTHER PTHR39624 1 131 7.9E-27 T 22-04-2016 SRM_RS12825 282bf430f5852930f65850a33df602a9 140 SUPERFAMILY SSF82784 1 131 1.57E-32 T 22-04-2016 IPR003718 OsmC/Ohr family SRM_RS12825 282bf430f5852930f65850a33df602a9 140 PANTHER PTHR39624:SF2 1 131 7.9E-27 T 22-04-2016 SRM_RS12825 282bf430f5852930f65850a33df602a9 140 Gene3D G3DSA:3.30.300.20 1 134 3.2E-54 T 22-04-2016 IPR015946 K homology domain-like, alpha/beta SRM_RS04530 99d1202eb1d66fcebc1f49d546ed2ea7 179 PANTHER PTHR21087:SF0 1 177 1.9E-48 T 22-04-2016 SRM_RS04530 99d1202eb1d66fcebc1f49d546ed2ea7 179 PANTHER PTHR21087 1 177 1.9E-48 T 22-04-2016 SRM_RS04530 99d1202eb1d66fcebc1f49d546ed2ea7 179 ProSitePatterns PS01128 Shikimate kinase signature. 56 81 - T 22-04-2016 IPR023000 Shikimate kinase, conserved site KEGG: 00400+2.7.1.71|MetaCyc: PWY-6163|UniPathway: UPA00053 SRM_RS04530 99d1202eb1d66fcebc1f49d546ed2ea7 179 Pfam PF01202 Shikimate kinase 9 172 2.9E-40 T 22-04-2016 IPR031322 Shikimate kinase/gluconokinase KEGG: 00400+2.7.1.71|MetaCyc: PWY-6163|UniPathway: UPA00053 SRM_RS04530 99d1202eb1d66fcebc1f49d546ed2ea7 179 Hamap MF_00109 Shikimate kinase [aroK]. 1 173 24.994 T 22-04-2016 IPR000623 Shikimate kinase/Threonine synthase-like 1 KEGG: 00400+2.7.1.71|MetaCyc: PWY-6163|UniPathway: UPA00053 SRM_RS04530 99d1202eb1d66fcebc1f49d546ed2ea7 179 SUPERFAMILY SSF52540 1 173 1.01E-24 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SRM_RS04530 99d1202eb1d66fcebc1f49d546ed2ea7 179 PRINTS PR01100 Shikimate kinase family signature 3 18 4.9E-21 T 22-04-2016 SRM_RS04530 99d1202eb1d66fcebc1f49d546ed2ea7 179 PRINTS PR01100 Shikimate kinase family signature 55 63 4.9E-21 T 22-04-2016 SRM_RS04530 99d1202eb1d66fcebc1f49d546ed2ea7 179 PRINTS PR01100 Shikimate kinase family signature 94 111 4.9E-21 T 22-04-2016 SRM_RS04530 99d1202eb1d66fcebc1f49d546ed2ea7 179 PRINTS PR01100 Shikimate kinase family signature 27 40 4.9E-21 T 22-04-2016 SRM_RS04530 99d1202eb1d66fcebc1f49d546ed2ea7 179 PRINTS PR01100 Shikimate kinase family signature 73 82 4.9E-21 T 22-04-2016 SRM_RS04530 99d1202eb1d66fcebc1f49d546ed2ea7 179 Gene3D G3DSA:3.40.50.300 1 173 1.2E-45 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SRM_RS12650 e0926676ab0ee84d751b87ad19a8270a 847 SUPERFAMILY SSF53187 40 327 1.98E-54 T 22-04-2016 SRM_RS12650 e0926676ab0ee84d751b87ad19a8270a 847 Gene3D G3DSA:3.40.630.10 46 276 1.1E-25 T 22-04-2016 SRM_RS12650 e0926676ab0ee84d751b87ad19a8270a 847 SMART SM00631 46 317 0.0029 T 22-04-2016 IPR000834 Peptidase M14, carboxypeptidase A GO:0004181|GO:0006508|GO:0008270 SRM_RS12650 e0926676ab0ee84d751b87ad19a8270a 847 Pfam PF00246 Zinc carboxypeptidase 54 219 2.8E-19 T 22-04-2016 IPR000834 Peptidase M14, carboxypeptidase A GO:0004181|GO:0006508|GO:0008270 SRM_RS12650 e0926676ab0ee84d751b87ad19a8270a 847 SUPERFAMILY SSF52317 607 843 4.32E-16 T 22-04-2016 IPR029062 Class I glutamine amidotransferase-like SRM_RS01090 ae5225d347a9a7707d37e0e9e1212114 192 SUPERFAMILY SSF55729 8 177 3.06E-14 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase SRM_RS01090 ae5225d347a9a7707d37e0e9e1212114 192 Gene3D G3DSA:3.40.630.30 7 165 3.4E-13 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase SRM_RS03085 310ffcbb2e39d6a4f0ce3612f088a8d5 339 Gene3D G3DSA:3.40.190.100 136 252 1.7E-21 T 22-04-2016 SRM_RS03085 310ffcbb2e39d6a4f0ce3612f088a8d5 339 PANTHER PTHR30177:SF0 57 306 3.2E-35 T 22-04-2016 SRM_RS03085 310ffcbb2e39d6a4f0ce3612f088a8d5 339 SUPERFAMILY SSF53850 46 314 3.04E-52 T 22-04-2016 SRM_RS03085 310ffcbb2e39d6a4f0ce3612f088a8d5 339 PANTHER PTHR30177 57 306 3.2E-35 T 22-04-2016 SRM_RS03085 310ffcbb2e39d6a4f0ce3612f088a8d5 339 Pfam PF04069 Substrate binding domain of ABC-type glycine betaine transport system 50 301 6.8E-41 T 22-04-2016 IPR007210 ABC-type glycine betaine transport system, substrate-binding domain GO:0005215|GO:0006810 SRM_RS03085 310ffcbb2e39d6a4f0ce3612f088a8d5 339 Gene3D G3DSA:3.40.190.10 51 132 5.3E-28 T 22-04-2016 SRM_RS03085 310ffcbb2e39d6a4f0ce3612f088a8d5 339 Gene3D G3DSA:3.40.190.10 253 316 5.3E-28 T 22-04-2016 SRM_RS08470 310fb22f910a4a4f05147543d5ea904f 665 PRINTS PR01435 NADH-plastoquinone oxidoreductase chain 5 signature 63 87 2.6E-13 T 22-04-2016 IPR018393 NADH-plastoquinone oxidoreductase, chain 5 subgroup GO:0008137|GO:0042773|GO:0055114 SRM_RS08470 310fb22f910a4a4f05147543d5ea904f 665 PRINTS PR01435 NADH-plastoquinone oxidoreductase chain 5 signature 479 500 2.6E-13 T 22-04-2016 IPR018393 NADH-plastoquinone oxidoreductase, chain 5 subgroup GO:0008137|GO:0042773|GO:0055114 SRM_RS08470 310fb22f910a4a4f05147543d5ea904f 665 PRINTS PR01435 NADH-plastoquinone oxidoreductase chain 5 signature 603 629 2.6E-13 T 22-04-2016 IPR018393 NADH-plastoquinone oxidoreductase, chain 5 subgroup GO:0008137|GO:0042773|GO:0055114 SRM_RS08470 310fb22f910a4a4f05147543d5ea904f 665 PRINTS PR01435 NADH-plastoquinone oxidoreductase chain 5 signature 89 109 2.6E-13 T 22-04-2016 IPR018393 NADH-plastoquinone oxidoreductase, chain 5 subgroup GO:0008137|GO:0042773|GO:0055114 SRM_RS08470 310fb22f910a4a4f05147543d5ea904f 665 PRINTS PR01435 NADH-plastoquinone oxidoreductase chain 5 signature 267 289 2.6E-13 T 22-04-2016 IPR018393 NADH-plastoquinone oxidoreductase, chain 5 subgroup GO:0008137|GO:0042773|GO:0055114 SRM_RS08470 310fb22f910a4a4f05147543d5ea904f 665 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 115 135 1.5E-60 T 22-04-2016 SRM_RS08470 310fb22f910a4a4f05147543d5ea904f 665 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 249 275 1.5E-60 T 22-04-2016 SRM_RS08470 310fb22f910a4a4f05147543d5ea904f 665 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 162 183 1.5E-60 T 22-04-2016 SRM_RS08470 310fb22f910a4a4f05147543d5ea904f 665 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 87 112 1.5E-60 T 22-04-2016 SRM_RS08470 310fb22f910a4a4f05147543d5ea904f 665 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 441 460 1.5E-60 T 22-04-2016 SRM_RS08470 310fb22f910a4a4f05147543d5ea904f 665 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 227 248 1.5E-60 T 22-04-2016 SRM_RS08470 310fb22f910a4a4f05147543d5ea904f 665 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 317 329 1.5E-60 T 22-04-2016 SRM_RS08470 310fb22f910a4a4f05147543d5ea904f 665 PANTHER PTHR22773:SF50 1 615 5.8E-221 T 22-04-2016 SRM_RS08470 310fb22f910a4a4f05147543d5ea904f 665 PANTHER PTHR22773 1 615 5.8E-221 T 22-04-2016 SRM_RS08470 310fb22f910a4a4f05147543d5ea904f 665 TIGRFAM TIGR01974 NDH_I_L: proton-translocating NADH-quinone oxidoreductase, chain L 6 661 2.2E-201 T 22-04-2016 IPR003945 NADH-plastoquinone oxidoreductase, chain 5 GO:0008137|GO:0042773|GO:0055114 SRM_RS08470 310fb22f910a4a4f05147543d5ea904f 665 Pfam PF00361 Proton-conducting membrane transporter 138 428 1.1E-83 T 22-04-2016 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit Reactome: REACT_6305 SRM_RS08470 310fb22f910a4a4f05147543d5ea904f 665 Pfam PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus 70 126 4.8E-23 T 22-04-2016 IPR001516 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminal SRM_RS07690 bf35ad5498dfc23840d43afabef2406c 650 PANTHER PTHR33451 105 649 1.6E-180 T 22-04-2016 SRM_RS07690 bf35ad5498dfc23840d43afabef2406c 650 PANTHER PTHR33451:SF7 105 649 1.6E-180 T 22-04-2016 SRM_RS07690 bf35ad5498dfc23840d43afabef2406c 650 Pfam PF03553 Na+/H+ antiporter family 274 605 3.2E-68 T 22-04-2016 IPR018461 Na+/H+ antiporter, NhaC-like, C-terminal GO:0016021 SRM_RS14430 dc05d37c58447709989b34279f625fc4 226 SUPERFAMILY SSF52833 74 214 1.21E-11 T 22-04-2016 IPR012336 Thioredoxin-like fold SRM_RS05500 b67448a03732f708851fc33821983d6a 365 Gene3D G3DSA:3.40.50.720 35 178 8.4E-39 T 22-04-2016 IPR016040 NAD(P)-binding domain SRM_RS05500 b67448a03732f708851fc33821983d6a 365 SUPERFAMILY SSF55347 167 330 8.01E-27 T 22-04-2016 SRM_RS05500 b67448a03732f708851fc33821983d6a 365 PANTHER PTHR22604:SF125 1 365 1.6E-120 T 22-04-2016 SRM_RS05500 b67448a03732f708851fc33821983d6a 365 Pfam PF02894 Oxidoreductase family, C-terminal alpha/beta domain 181 273 2.6E-7 T 22-04-2016 IPR004104 Oxidoreductase, C-terminal GO:0008152|GO:0016491|GO:0055114 SRM_RS05500 b67448a03732f708851fc33821983d6a 365 SUPERFAMILY SSF51735 29 187 1.64E-41 T 22-04-2016 IPR016040 NAD(P)-binding domain SRM_RS05500 b67448a03732f708851fc33821983d6a 365 PANTHER PTHR22604 1 365 1.6E-120 T 22-04-2016 SRM_RS05500 b67448a03732f708851fc33821983d6a 365 PRINTS PR01775 Bacterial glucose-fructose oxidoreductase signature 35 48 2.8E-12 T 22-04-2016 IPR008354 Glucose-fructose oxidoreductase, bacterial MetaCyc: PWY-5530|UniPathway: UPA00815 SRM_RS05500 b67448a03732f708851fc33821983d6a 365 PRINTS PR01775 Bacterial glucose-fructose oxidoreductase signature 89 105 2.8E-12 T 22-04-2016 IPR008354 Glucose-fructose oxidoreductase, bacterial MetaCyc: PWY-5530|UniPathway: UPA00815 SRM_RS05500 b67448a03732f708851fc33821983d6a 365 PRINTS PR01775 Bacterial glucose-fructose oxidoreductase signature 331 347 2.8E-12 T 22-04-2016 IPR008354 Glucose-fructose oxidoreductase, bacterial MetaCyc: PWY-5530|UniPathway: UPA00815 SRM_RS05500 b67448a03732f708851fc33821983d6a 365 PRINTS PR01775 Bacterial glucose-fructose oxidoreductase signature 151 165 2.8E-12 T 22-04-2016 IPR008354 Glucose-fructose oxidoreductase, bacterial MetaCyc: PWY-5530|UniPathway: UPA00815 SRM_RS05500 b67448a03732f708851fc33821983d6a 365 Gene3D G3DSA:3.30.360.10 179 358 1.2E-36 T 22-04-2016 SRM_RS05500 b67448a03732f708851fc33821983d6a 365 Pfam PF01408 Oxidoreductase family, NAD-binding Rossmann fold 38 161 7.0E-24 T 22-04-2016 IPR000683 Oxidoreductase, N-terminal GO:0016491 SRM_RS01465 8aeefbbbd5a982533dbfc20fc9d6edbe 324 Gene3D G3DSA:1.10.620.20 7 281 7.5E-52 T 22-04-2016 IPR012348 Ribonucleotide reductase-related GO:0016491|GO:0055114 Reactome: REACT_1698 SRM_RS01465 8aeefbbbd5a982533dbfc20fc9d6edbe 324 Pfam PF00268 Ribonucleotide reductase, small chain 7 281 5.9E-45 T 22-04-2016 IPR000358 Ribonucleotide reductase small subunit GO:0009186|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: REACT_1698|UniPathway: UPA00326 SRM_RS01465 8aeefbbbd5a982533dbfc20fc9d6edbe 324 SUPERFAMILY SSF47240 6 324 1.97E-64 T 22-04-2016 IPR009078 Ferritin-like superfamily SRM_RS07385 437630cd809a349821e6e366dae0b484 296 SUPERFAMILY SSF53720 11 252 2.49E-41 T 22-04-2016 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 SRM_RS07385 437630cd809a349821e6e366dae0b484 296 PANTHER PTHR11699:SF165 1 235 1.0E-52 T 22-04-2016 SRM_RS07385 437630cd809a349821e6e366dae0b484 296 Pfam PF00171 Aldehyde dehydrogenase family 29 258 3.4E-37 T 22-04-2016 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 SRM_RS07385 437630cd809a349821e6e366dae0b484 296 Gene3D G3DSA:3.40.605.10 11 253 2.8E-48 T 22-04-2016 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 SRM_RS07385 437630cd809a349821e6e366dae0b484 296 PANTHER PTHR11699 1 235 1.0E-52 T 22-04-2016 SRM_RS13015 38140d66ece404bed7015e0febd65b84 313 Gene3D G3DSA:3.30.470.10 5 125 2.9E-40 T 22-04-2016 SRM_RS13015 38140d66ece404bed7015e0febd65b84 313 SUPERFAMILY SSF56752 5 297 2.22E-98 T 22-04-2016 IPR001544 Aminotransferase class IV GO:0003824|GO:0008152 Reactome: REACT_13 SRM_RS13015 38140d66ece404bed7015e0febd65b84 313 TIGRFAM TIGR01122 ilvE_I: branched-chain amino acid aminotransferase 6 301 2.5E-127 T 22-04-2016 IPR005785 Branched-chain amino acid aminotransferase I GO:0004084|GO:0009081 KEGG: 00270+2.6.1.42|KEGG: 00280+2.6.1.42|KEGG: 00290+2.6.1.42|KEGG: 00770+2.6.1.42|KEGG: 00966+2.6.1.42|MetaCyc: PWY-5057|MetaCyc: PWY-5076|MetaCyc: PWY-5078|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5108|UniPathway: UPA00047|UniPathway: UPA00048|UniPathway: UPA00049 SRM_RS13015 38140d66ece404bed7015e0febd65b84 313 Pfam PF01063 Amino-transferase class IV 32 262 1.0E-46 T 22-04-2016 IPR001544 Aminotransferase class IV GO:0003824|GO:0008152 Reactome: REACT_13 SRM_RS13015 38140d66ece404bed7015e0febd65b84 313 ProSitePatterns PS00770 Aminotransferases class-IV signature. 189 218 - T 22-04-2016 IPR018300 Aminotransferase, class IV, conserved site GO:0003824|GO:0008152 Reactome: REACT_13 SRM_RS13015 38140d66ece404bed7015e0febd65b84 313 PANTHER PTHR11825:SF7 5 300 5.6E-118 T 22-04-2016 SRM_RS13015 38140d66ece404bed7015e0febd65b84 313 PANTHER PTHR11825 5 300 5.6E-118 T 22-04-2016 IPR001544 Aminotransferase class IV GO:0003824|GO:0008152 Reactome: REACT_13 SRM_RS13015 38140d66ece404bed7015e0febd65b84 313 Gene3D G3DSA:3.20.10.10 129 289 1.1E-54 T 22-04-2016 SRM_RS11285 9038ef9f0ef6644ec79ec47848deabf4 470 Gene3D G3DSA:1.20.1600.10 53 463 2.0E-61 T 22-04-2016 SRM_RS11285 9038ef9f0ef6644ec79ec47848deabf4 470 PANTHER PTHR30026 1 464 6.3E-42 T 22-04-2016 SRM_RS11285 9038ef9f0ef6644ec79ec47848deabf4 470 Pfam PF02321 Outer membrane efflux protein 56 261 8.2E-15 T 22-04-2016 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 SRM_RS11285 9038ef9f0ef6644ec79ec47848deabf4 470 Pfam PF02321 Outer membrane efflux protein 286 464 5.7E-28 T 22-04-2016 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 SRM_RS11285 9038ef9f0ef6644ec79ec47848deabf4 470 SUPERFAMILY SSF56954 22 464 1.96E-66 T 22-04-2016 SRM_RS15165 de6bc9566f3c9ac92054d6b808803763 559 Gene3D G3DSA:2.60.40.60 473 549 9.5E-4 T 22-04-2016 IPR002126 Cadherin GO:0005509|GO:0007156|GO:0016020 SRM_RS01855 3bf003ee99e416f136fc02ddf5114a8a 433 PANTHER PTHR12526 155 411 8.2E-35 T 22-04-2016 SRM_RS01855 3bf003ee99e416f136fc02ddf5114a8a 433 PANTHER PTHR12526 11 132 8.2E-35 T 22-04-2016 SRM_RS01855 3bf003ee99e416f136fc02ddf5114a8a 433 Pfam PF13579 Glycosyl transferase 4-like domain 27 204 1.0E-16 T 22-04-2016 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain SRM_RS01855 3bf003ee99e416f136fc02ddf5114a8a 433 PANTHER PTHR12526:SF320 155 411 8.2E-35 T 22-04-2016 SRM_RS01855 3bf003ee99e416f136fc02ddf5114a8a 433 PANTHER PTHR12526:SF320 11 132 8.2E-35 T 22-04-2016 SRM_RS01855 3bf003ee99e416f136fc02ddf5114a8a 433 Gene3D G3DSA:3.40.50.2000 196 392 1.7E-10 T 22-04-2016 SRM_RS01855 3bf003ee99e416f136fc02ddf5114a8a 433 SUPERFAMILY SSF53756 12 411 1.15E-41 T 22-04-2016 SRM_RS01855 3bf003ee99e416f136fc02ddf5114a8a 433 Pfam PF00534 Glycosyl transferases group 1 223 392 3.3E-12 T 22-04-2016 IPR001296 Glycosyl transferase, family 1 SRM_RS14670 be38c2cb267aa21252498e8572ccf644 241 TIGRFAM TIGR03506 FlgEFG_subfam: flagellar hook-basal body protein 5 122 5.6E-30 T 22-04-2016 IPR020013 Fagellar hook-basal body protein, FlgE/F/G SRM_RS14670 be38c2cb267aa21252498e8572ccf644 241 TIGRFAM TIGR03506 FlgEFG_subfam: flagellar hook-basal body protein 135 220 6.5E-22 T 22-04-2016 IPR020013 Fagellar hook-basal body protein, FlgE/F/G SRM_RS14670 be38c2cb267aa21252498e8572ccf644 241 SUPERFAMILY SSF117143 77 199 5.49E-21 T 22-04-2016 SRM_RS14670 be38c2cb267aa21252498e8572ccf644 241 Pfam PF06429 Flagellar basal body rod FlgEFG protein C-terminal 167 236 3.6E-19 T 22-04-2016 IPR010930 Flagellar basal-body/hook protein, C-terminal domain SRM_RS14670 be38c2cb267aa21252498e8572ccf644 241 Pfam PF00460 Flagella basal body rod protein 5 35 1.9E-6 T 22-04-2016 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 SRM_RS14670 be38c2cb267aa21252498e8572ccf644 241 PANTHER PTHR30435 1 236 1.4E-49 T 22-04-2016 SRM_RS14670 be38c2cb267aa21252498e8572ccf644 241 PANTHER PTHR30435:SF16 1 236 1.4E-49 T 22-04-2016 SRM_RS14670 be38c2cb267aa21252498e8572ccf644 241 TIGRFAM TIGR02490 flgF: flagellar basal-body rod protein FlgF 7 218 1.1E-59 T 22-04-2016 IPR012836 Flagellar basal-body rod FlgF GO:0030694|GO:0071973 SRM_RS08065 1f740f0b3a6a55935fbf9d9ba830644d 251 PANTHER PTHR24220:SF497 13 244 7.1E-135 T 22-04-2016 SRM_RS08065 1f740f0b3a6a55935fbf9d9ba830644d 251 Gene3D G3DSA:3.40.50.300 9 241 2.5E-70 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SRM_RS08065 1f740f0b3a6a55935fbf9d9ba830644d 251 SMART SM00382 36 220 3.5E-9 T 22-04-2016 IPR003593 AAA+ ATPase domain SRM_RS08065 1f740f0b3a6a55935fbf9d9ba830644d 251 TIGRFAM TIGR04406 LPS_export_lptB: LPS export ABC transporter ATP-binding protein 12 248 1.4E-109 T 22-04-2016 IPR030921 LPS export ABC transporter, ATP-binding protein LptB GO:0043190|GO:0055085 SRM_RS08065 1f740f0b3a6a55935fbf9d9ba830644d 251 SUPERFAMILY SSF52540 12 244 1.82E-65 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SRM_RS08065 1f740f0b3a6a55935fbf9d9ba830644d 251 PANTHER PTHR24220 13 244 7.1E-135 T 22-04-2016 SRM_RS08065 1f740f0b3a6a55935fbf9d9ba830644d 251 Pfam PF00005 ABC transporter 28 173 1.3E-35 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 SRM_RS05060 ec4b1a14df8c02307b4de3f7d7779774 465 SUPERFAMILY SSF161070 1 424 4.58E-106 T 22-04-2016 SRM_RS05060 ec4b1a14df8c02307b4de3f7d7779774 465 PRINTS PR00176 Sodium/chloride neurotransmitter symporter signature 73 99 1.2E-7 T 22-04-2016 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 SRM_RS05060 ec4b1a14df8c02307b4de3f7d7779774 465 PRINTS PR00176 Sodium/chloride neurotransmitter symporter signature 27 46 1.2E-7 T 22-04-2016 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 SRM_RS05060 ec4b1a14df8c02307b4de3f7d7779774 465 ProSitePatterns PS00610 Sodium:neurotransmitter symporter family signature 1. 14 28 - T 22-04-2016 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 SRM_RS05060 ec4b1a14df8c02307b4de3f7d7779774 465 PANTHER PTHR11616 1 421 7.3E-85 T 22-04-2016 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 SRM_RS05060 ec4b1a14df8c02307b4de3f7d7779774 465 PANTHER PTHR11616:SF167 1 421 7.3E-85 T 22-04-2016 SRM_RS05060 ec4b1a14df8c02307b4de3f7d7779774 465 Pfam PF00209 Sodium:neurotransmitter symporter family 1 105 2.4E-25 T 22-04-2016 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 SRM_RS05060 ec4b1a14df8c02307b4de3f7d7779774 465 Pfam PF00209 Sodium:neurotransmitter symporter family 134 420 6.7E-29 T 22-04-2016 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 SRM_RS08645 0028e01499f382f629d57a96527310eb 229 Hamap MF_01043 Glycerol-3-phosphate acyltransferase [plsY]. 6 215 19.075 T 22-04-2016 IPR003811 Glycerol-3-phosphate acyltransferase, PlsY GO:0005886|GO:0008654|GO:0043772 UniPathway: UPA00085 SRM_RS08645 0028e01499f382f629d57a96527310eb 229 TIGRFAM TIGR00023 TIGR00023: acyl-phosphate glycerol 3-phosphate acyltransferase 6 215 9.0E-48 T 22-04-2016 IPR003811 Glycerol-3-phosphate acyltransferase, PlsY GO:0005886|GO:0008654|GO:0043772 UniPathway: UPA00085 SRM_RS08645 0028e01499f382f629d57a96527310eb 229 PANTHER PTHR30309 1 214 3.9E-56 T 22-04-2016 SRM_RS08645 0028e01499f382f629d57a96527310eb 229 Pfam PF02660 Glycerol-3-phosphate acyltransferase 10 206 3.6E-52 T 22-04-2016 IPR003811 Glycerol-3-phosphate acyltransferase, PlsY GO:0005886|GO:0008654|GO:0043772 UniPathway: UPA00085 SRM_RS08645 0028e01499f382f629d57a96527310eb 229 SMART SM01207 9 207 6.9E-71 T 22-04-2016 IPR003811 Glycerol-3-phosphate acyltransferase, PlsY GO:0005886|GO:0008654|GO:0043772 UniPathway: UPA00085 SRM_RS08645 0028e01499f382f629d57a96527310eb 229 PANTHER PTHR30309:SF0 1 214 3.9E-56 T 22-04-2016 IPR003811 Glycerol-3-phosphate acyltransferase, PlsY GO:0005886|GO:0008654|GO:0043772 UniPathway: UPA00085 SRM_RS15915 826a57146afe9293272d0e18faaec277 301 Pfam PF00534 Glycosyl transferases group 1 108 265 4.0E-31 T 22-04-2016 IPR001296 Glycosyl transferase, family 1 SRM_RS15915 826a57146afe9293272d0e18faaec277 301 SUPERFAMILY SSF53756 5 287 9.11E-55 T 22-04-2016 SRM_RS15915 826a57146afe9293272d0e18faaec277 301 Gene3D G3DSA:3.40.50.2000 109 264 6.9E-30 T 22-04-2016 SRM_RS15915 826a57146afe9293272d0e18faaec277 301 PANTHER PTHR12526 6 287 2.5E-40 T 22-04-2016 SRM_RS11435 f484e55d96e8b43461bd471164f500d1 370 SUPERFAMILY SSF53474 263 366 2.06E-41 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold SRM_RS11435 f484e55d96e8b43461bd471164f500d1 370 SUPERFAMILY SSF53474 47 216 2.06E-41 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold SRM_RS11435 f484e55d96e8b43461bd471164f500d1 370 Gene3D G3DSA:3.40.50.1820 285 365 4.7E-55 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold SRM_RS11435 f484e55d96e8b43461bd471164f500d1 370 Gene3D G3DSA:3.40.50.1820 27 216 4.7E-55 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold SRM_RS11435 f484e55d96e8b43461bd471164f500d1 370 Pfam PF00756 Putative esterase 72 347 2.5E-29 T 22-04-2016 IPR000801 Putative esterase SRM_RS04175 3f2eb0a32e999e7c69d26f8166f5e8cc 396 PANTHER PTHR30405 1 358 1.3E-64 T 22-04-2016 SRM_RS04175 3f2eb0a32e999e7c69d26f8166f5e8cc 396 Pfam PF01385 Probable transposase 158 269 4.4E-15 T 22-04-2016 IPR001959 Probable transposase, IS891/IS1136/IS1341 SRM_RS04175 3f2eb0a32e999e7c69d26f8166f5e8cc 396 TIGRFAM TIGR01766 tspaseT_teng_C: transposase, IS605 OrfB family 237 316 1.3E-22 T 22-04-2016 IPR010095 Transposase IS605, OrfB, C-terminal SRM_RS04175 3f2eb0a32e999e7c69d26f8166f5e8cc 396 Pfam PF07282 Putative transposase DNA-binding domain 289 354 4.4E-25 T 22-04-2016 IPR010095 Transposase IS605, OrfB, C-terminal SRM_RS13590 7b6a553b0595805a7e8c1f128997cb3a 342 SUPERFAMILY SSF53067 152 311 2.73E-9 T 22-04-2016 SRM_RS13590 7b6a553b0595805a7e8c1f128997cb3a 342 SUPERFAMILY SSF53067 3 142 2.72E-10 T 22-04-2016 SRM_RS03930 11ba394ce611d6cda9d764c43097d2fe 435 Pfam PF02706 Chain length determinant protein 28 240 6.5E-9 T 22-04-2016 IPR003856 Lipopolysaccharide biosynthesis GO:0009103|GO:0016020 SRM_RS03930 11ba394ce611d6cda9d764c43097d2fe 435 PANTHER PTHR32309 183 354 6.1E-15 T 22-04-2016 SRM_RS03930 11ba394ce611d6cda9d764c43097d2fe 435 PANTHER PTHR32309 7 147 6.1E-15 T 22-04-2016 SRM_RS03930 11ba394ce611d6cda9d764c43097d2fe 435 Pfam PF13807 G-rich domain on putative tyrosine kinase 314 388 7.9E-11 T 22-04-2016 IPR032807 Tyrosine kinase, G-rich domain SRM_RS05840 85963bd07593e4370284766afc87cb8b 169 TIGRFAM TIGR01144 ATP_synt_b: ATP synthase F0, B subunit 21 165 2.3E-34 T 22-04-2016 IPR005864 ATPase, F0 complex, subunit B, bacterial GO:0015078|GO:0015986|GO:0045263 SRM_RS05840 85963bd07593e4370284766afc87cb8b 169 SUPERFAMILY SSF81573 76 131 6.93E-7 T 22-04-2016 IPR028987 F-type ATP synthase subunit B-like, membrane domain SRM_RS05840 85963bd07593e4370284766afc87cb8b 169 Gene3D G3DSA:1.20.5.620 76 131 5.8E-5 T 22-04-2016 IPR028987 F-type ATP synthase subunit B-like, membrane domain SRM_RS05840 85963bd07593e4370284766afc87cb8b 169 PANTHER PTHR33445 15 169 2.0E-38 T 22-04-2016 SRM_RS05840 85963bd07593e4370284766afc87cb8b 169 Pfam PF00430 ATP synthase B/B' CF(0) 17 147 9.4E-35 T 22-04-2016 IPR002146 ATPase, F0 complex, subunit B/B', bacterial/chloroplast GO:0015078|GO:0015986|GO:0045263 SRM_RS05840 85963bd07593e4370284766afc87cb8b 169 Hamap MF_01398 ATP synthase subunit b [atpF]. 10 166 14.468 T 22-04-2016 IPR002146 ATPase, F0 complex, subunit B/B', bacterial/chloroplast GO:0015078|GO:0015986|GO:0045263 SRM_RS07950 e541ec41b6ca07afecf2f828f16b95f7 471 PANTHER PTHR12260 38 463 6.9E-111 T 22-04-2016 SRM_RS07950 e541ec41b6ca07afecf2f828f16b95f7 471 PANTHER PTHR12260:SF6 38 463 6.9E-111 T 22-04-2016 SRM_RS07950 e541ec41b6ca07afecf2f828f16b95f7 471 SUPERFAMILY SSF111321 115 436 1.83E-51 T 22-04-2016 IPR002791 Domain of unknown function DUF89 SRM_RS07950 e541ec41b6ca07afecf2f828f16b95f7 471 Pfam PF01937 Protein of unknown function DUF89 78 436 5.3E-89 T 22-04-2016 IPR002791 Domain of unknown function DUF89 SRM_RS05620 bdbd4479046e9fc19f2635f5534e8c73 319 Pfam PF13280 WYL domain 142 307 3.3E-30 T 22-04-2016 IPR026881 WYL domain SRM_RS05620 bdbd4479046e9fc19f2635f5534e8c73 319 SUPERFAMILY SSF46785 1 60 3.92E-11 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SRM_RS05620 bdbd4479046e9fc19f2635f5534e8c73 319 Gene3D G3DSA:1.10.10.10 9 62 7.5E-15 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SRM_RS05620 bdbd4479046e9fc19f2635f5534e8c73 319 PANTHER PTHR34580 22 317 5.8E-43 T 22-04-2016 SRM_RS05620 bdbd4479046e9fc19f2635f5534e8c73 319 PIRSF PIRSF016838 12 316 2.6E-19 T 22-04-2016 IPR028349 Protein PafC SRM_RS05620 bdbd4479046e9fc19f2635f5534e8c73 319 Pfam PF08279 HTH domain 20 59 3.7E-11 T 22-04-2016 IPR013196 Helix-turn-helix, type 11 SRM_RS05620 bdbd4479046e9fc19f2635f5534e8c73 319 PANTHER PTHR34580:SF3 22 317 5.8E-43 T 22-04-2016 SRM_RS06605 ebc03371d4fc9413fb1bc99d0909c1b6 197 Gene3D G3DSA:3.90.1030.10 1 117 8.8E-43 T 22-04-2016 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SRM_RS06605 ebc03371d4fc9413fb1bc99d0909c1b6 197 ProSitePatterns PS01167 Ribosomal protein L17 signature. 34 56 - T 22-04-2016 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SRM_RS06605 ebc03371d4fc9413fb1bc99d0909c1b6 197 Hamap MF_01368 50S ribosomal protein L17 [rplQ]. 5 116 25.562 T 22-04-2016 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SRM_RS06605 ebc03371d4fc9413fb1bc99d0909c1b6 197 SUPERFAMILY SSF64263 1 119 4.19E-42 T 22-04-2016 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SRM_RS06605 ebc03371d4fc9413fb1bc99d0909c1b6 197 TIGRFAM TIGR00059 L17: ribosomal protein bL17 8 117 2.8E-37 T 22-04-2016 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SRM_RS06605 ebc03371d4fc9413fb1bc99d0909c1b6 197 PANTHER PTHR14413 1 180 4.4E-49 T 22-04-2016 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SRM_RS06605 ebc03371d4fc9413fb1bc99d0909c1b6 197 Pfam PF01196 Ribosomal protein L17 21 116 2.5E-30 T 22-04-2016 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SRM_RS03460 176a1832b9639b89d7d2e5461607ede9 219 SUPERFAMILY SSF74653 140 216 1.31E-21 T 22-04-2016 SRM_RS03460 176a1832b9639b89d7d2e5461607ede9 219 PRINTS PR01374 Gram-negative bacterial tonB protein signature 65 75 2.5E-7 T 22-04-2016 IPR003538 Gram-negative bacterial TonB protein GO:0015343|GO:0015891|GO:0030288|GO:0031992 SRM_RS03460 176a1832b9639b89d7d2e5461607ede9 219 PRINTS PR01374 Gram-negative bacterial tonB protein signature 137 158 2.5E-7 T 22-04-2016 IPR003538 Gram-negative bacterial TonB protein GO:0015343|GO:0015891|GO:0030288|GO:0031992 SRM_RS03460 176a1832b9639b89d7d2e5461607ede9 219 PRINTS PR01374 Gram-negative bacterial tonB protein signature 158 176 2.5E-7 T 22-04-2016 IPR003538 Gram-negative bacterial TonB protein GO:0015343|GO:0015891|GO:0030288|GO:0031992 SRM_RS03460 176a1832b9639b89d7d2e5461607ede9 219 PANTHER PTHR33446:SF2 49 219 3.0E-25 T 22-04-2016 SRM_RS03460 176a1832b9639b89d7d2e5461607ede9 219 Pfam PF03544 Gram-negative bacterial TonB protein C-terminal 143 218 1.5E-22 T 22-04-2016 IPR006260 TonB, C-terminal GO:0006810 SRM_RS03460 176a1832b9639b89d7d2e5461607ede9 219 Gene3D G3DSA:3.30.1150.10 137 219 1.8E-10 T 22-04-2016 SRM_RS03460 176a1832b9639b89d7d2e5461607ede9 219 TIGRFAM TIGR01352 tonB_Cterm: TonB family C-terminal domain 144 218 7.6E-17 T 22-04-2016 IPR006260 TonB, C-terminal GO:0006810 SRM_RS03460 176a1832b9639b89d7d2e5461607ede9 219 PANTHER PTHR33446 49 219 3.0E-25 T 22-04-2016 SRM_RS13625 7540230afb4ed4ffa2bc99651cddbbb4 237 Pfam PF00571 CBS domain 101 141 5.7E-6 T 22-04-2016 IPR000644 CBS domain SRM_RS13625 7540230afb4ed4ffa2bc99651cddbbb4 237 Pfam PF00571 CBS domain 159 213 9.9E-14 T 22-04-2016 IPR000644 CBS domain SRM_RS13625 7540230afb4ed4ffa2bc99651cddbbb4 237 SMART SM00116 100 147 19.0 T 22-04-2016 IPR000644 CBS domain SRM_RS13625 7540230afb4ed4ffa2bc99651cddbbb4 237 SMART SM00116 165 213 5.8E-11 T 22-04-2016 IPR000644 CBS domain SRM_RS13625 7540230afb4ed4ffa2bc99651cddbbb4 237 Gene3D G3DSA:3.20.20.70 96 217 7.6E-31 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 SRM_RS13625 7540230afb4ed4ffa2bc99651cddbbb4 237 SUPERFAMILY SSF54631 100 215 7.33E-30 T 22-04-2016 SRM_RS13625 7540230afb4ed4ffa2bc99651cddbbb4 237 PANTHER PTHR11911:SF68 102 231 2.4E-26 T 22-04-2016 SRM_RS13625 7540230afb4ed4ffa2bc99651cddbbb4 237 PANTHER PTHR11911 102 231 2.4E-26 T 22-04-2016 SRM_RS10080 248622f667d00c8936047e0cd8b03e59 389 PANTHER PTHR35793:SF1 205 362 7.3E-54 T 22-04-2016 SRM_RS10080 248622f667d00c8936047e0cd8b03e59 389 Pfam PF07670 Nucleoside recognition 225 329 1.1E-6 T 22-04-2016 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain Reactome: REACT_15518|Reactome: REACT_1698 SRM_RS10080 248622f667d00c8936047e0cd8b03e59 389 PANTHER PTHR35793 205 362 7.3E-54 T 22-04-2016 SRM_RS13010 803fecbfe202ae1f5ea6f1f432301c3b 286 Pfam PF02592 Putative vitamin uptake transporter 93 263 2.9E-52 T 22-04-2016 IPR003744 Protein of unknown function DUF165 SRM_RS13010 803fecbfe202ae1f5ea6f1f432301c3b 286 PANTHER PTHR34300:SF2 58 286 1.0E-56 T 22-04-2016 SRM_RS13010 803fecbfe202ae1f5ea6f1f432301c3b 286 PANTHER PTHR34300 58 286 1.0E-56 T 22-04-2016 SRM_RS13010 803fecbfe202ae1f5ea6f1f432301c3b 286 TIGRFAM TIGR00697 TIGR00697: conserved hypothetical integral membrane protein 68 268 6.1E-52 T 22-04-2016 IPR003744 Protein of unknown function DUF165 SRM_RS12100 0f3b23b039d3cb01f96753a460a6b482 413 PANTHER PTHR21716 63 400 3.5E-47 T 22-04-2016 IPR002549 Transmembrane protein TqsA-like SRM_RS12100 0f3b23b039d3cb01f96753a460a6b482 413 Pfam PF01594 Domain of unknown function DUF20 78 400 1.6E-48 T 22-04-2016 IPR002549 Transmembrane protein TqsA-like SRM_RS16055 95f748d521a7fb941d10a2433ada79c1 180 PANTHER PTHR30336 20 162 4.3E-31 T 22-04-2016 SRM_RS16055 95f748d521a7fb941d10a2433ada79c1 180 PANTHER PTHR30336:SF1 20 162 4.3E-31 T 22-04-2016 SRM_RS16055 95f748d521a7fb941d10a2433ada79c1 180 Pfam PF02698 DUF218 domain 21 145 5.9E-24 T 22-04-2016 IPR003848 Domain of unknown function DUF218 SRM_RS16055 95f748d521a7fb941d10a2433ada79c1 180 Gene3D G3DSA:3.40.50.620 20 114 1.2E-23 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold SRM_RS09930 22f09ddb9106d43d05f191b0a3d74f72 792 Pfam PF12704 MacB-like periplasmic core domain 21 235 7.7E-18 T 22-04-2016 IPR025857 MacB-like periplasmic core domain SRM_RS09930 22f09ddb9106d43d05f191b0a3d74f72 792 PANTHER PTHR30572:SF4 268 340 8.5E-56 T 22-04-2016 SRM_RS09930 22f09ddb9106d43d05f191b0a3d74f72 792 PANTHER PTHR30572:SF4 403 792 8.5E-56 T 22-04-2016 SRM_RS09930 22f09ddb9106d43d05f191b0a3d74f72 792 PANTHER PTHR30572 268 340 8.5E-56 T 22-04-2016 SRM_RS09930 22f09ddb9106d43d05f191b0a3d74f72 792 PANTHER PTHR30572 403 792 8.5E-56 T 22-04-2016 SRM_RS09930 22f09ddb9106d43d05f191b0a3d74f72 792 Pfam PF02687 FtsX-like permease family 279 383 1.6E-18 T 22-04-2016 IPR003838 ABC transporter permease protein domain GO:0016020 SRM_RS09930 22f09ddb9106d43d05f191b0a3d74f72 792 Pfam PF02687 FtsX-like permease family 673 781 2.2E-12 T 22-04-2016 IPR003838 ABC transporter permease protein domain GO:0016020 SRM_RS04000 196832f527c9d44156db34c65c34bcda 293 Pfam PF13613 Helix-turn-helix of DDE superfamily endonuclease 68 113 1.6E-8 T 22-04-2016 IPR027805 Transposase, Helix-turn-helix domain SRM_RS04000 196832f527c9d44156db34c65c34bcda 293 Pfam PF13359 DDE superfamily endonuclease 170 221 2.4E-8 T 22-04-2016 IPR027806 Harbinger transposase-derived nuclease domain SRM_RS06855 136a317a5f9e1309ba8d1e2cd26050ef 72 Pfam PF04255 Protein of unknown function (DUF433) 6 51 5.8E-16 T 22-04-2016 IPR007367 Protein of unknown function DUF433 SRM_RS06855 136a317a5f9e1309ba8d1e2cd26050ef 72 SUPERFAMILY SSF46689 3 46 1.06E-12 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 SRM_RS06855 136a317a5f9e1309ba8d1e2cd26050ef 72 Gene3D G3DSA:1.10.10.10 6 47 2.3E-14 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SRM_RS03670 43456eaa2bfd8e124f35b797460f5cc1 181 Gene3D G3DSA:3.40.220.10 8 175 6.6E-51 T 22-04-2016 SRM_RS03670 43456eaa2bfd8e124f35b797460f5cc1 181 PANTHER PTHR11106 4 173 9.9E-57 T 22-04-2016 SRM_RS03670 43456eaa2bfd8e124f35b797460f5cc1 181 SMART SM00506 9 138 4.9E-37 T 22-04-2016 IPR002589 Macro domain SRM_RS03670 43456eaa2bfd8e124f35b797460f5cc1 181 SUPERFAMILY SSF52949 5 172 4.88E-51 T 22-04-2016 SRM_RS03670 43456eaa2bfd8e124f35b797460f5cc1 181 Pfam PF01661 Macro domain 27 138 2.8E-33 T 22-04-2016 IPR002589 Macro domain SRM_RS05185 657ed88351db7ebd36927298e0822ee2 263 SUPERFAMILY SSF53756 8 161 6.36E-13 T 22-04-2016 SRM_RS05185 657ed88351db7ebd36927298e0822ee2 263 Pfam PF08323 Starch synthase catalytic domain 9 178 5.2E-30 T 22-04-2016 IPR013534 Starch synthase, catalytic domain KEGG: 00500+2.4.1.21|MetaCyc: PWY-622|UniPathway: UPA00164 SRM_RS07310 ea065cd0b773912a59d9d6b6a04aeffa 461 SUPERFAMILY SSF54373 294 402 3.53E-27 T 22-04-2016 SRM_RS07310 ea065cd0b773912a59d9d6b6a04aeffa 461 Gene3D G3DSA:1.10.3110.10 98 193 2.1E-28 T 22-04-2016 SRM_RS07310 ea065cd0b773912a59d9d6b6a04aeffa 461 PANTHER PTHR10742:SF229 3 451 4.2E-103 T 22-04-2016 SRM_RS07310 ea065cd0b773912a59d9d6b6a04aeffa 461 TIGRFAM TIGR00562 proto_IX_ox: protoporphyrinogen oxidase 3 451 1.9E-76 T 22-04-2016 IPR004572 Protoporphyrinogen oxidase GO:0004729|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.4|MetaCyc: PWY-7159|UniPathway: UPA00251 SRM_RS07310 ea065cd0b773912a59d9d6b6a04aeffa 461 SUPERFAMILY SSF51905 419 451 4.66E-53 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SRM_RS07310 ea065cd0b773912a59d9d6b6a04aeffa 461 SUPERFAMILY SSF51905 3 309 4.66E-53 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SRM_RS07310 ea065cd0b773912a59d9d6b6a04aeffa 461 Gene3D G3DSA:3.40.50.720 200 230 2.5E-12 T 22-04-2016 IPR016040 NAD(P)-binding domain SRM_RS07310 ea065cd0b773912a59d9d6b6a04aeffa 461 Gene3D G3DSA:3.40.50.720 2 42 2.5E-12 T 22-04-2016 IPR016040 NAD(P)-binding domain SRM_RS07310 ea065cd0b773912a59d9d6b6a04aeffa 461 Gene3D G3DSA:3.90.660.20 231 402 1.7E-46 T 22-04-2016 IPR027418 Protoporphyrinogen oxidase, C-terminal domain KEGG: 00860+1.3.3.4|MetaCyc: PWY-7159|UniPathway: UPA00251 SRM_RS07310 ea065cd0b773912a59d9d6b6a04aeffa 461 PANTHER PTHR10742 3 451 4.2E-103 T 22-04-2016 SRM_RS07310 ea065cd0b773912a59d9d6b6a04aeffa 461 Pfam PF01593 Flavin containing amine oxidoreductase 11 451 2.5E-71 T 22-04-2016 IPR002937 Amine oxidase GO:0016491|GO:0055114 SRM_RS14800 f591da7337ff9b74b886ad15dc8a6928 433 Pfam PF12698 ABC-2 family transporter protein 21 406 4.0E-51 T 22-04-2016 SRM_RS14800 f591da7337ff9b74b886ad15dc8a6928 433 PANTHER PTHR41312 4 433 3.8E-48 T 22-04-2016 SRM_RS14800 f591da7337ff9b74b886ad15dc8a6928 433 Gene3D G3DSA:3.40.190.10 49 150 1.7E-8 T 22-04-2016 SRM_RS14800 f591da7337ff9b74b886ad15dc8a6928 433 SUPERFAMILY SSF53850 52 185 1.09E-12 T 22-04-2016 SRM_RS11695 7bd0d10654579c00cdc8c6a95a95c6cf 817 Pfam PF10070 Uncharacterized protein conserved in bacteria (DUF2309) 12 773 4.2E-269 T 22-04-2016 IPR018752 Uncharacterised protein family UPF0753 SRM_RS11695 7bd0d10654579c00cdc8c6a95a95c6cf 817 PANTHER PTHR38344:SF1 1 817 6.2E-220 T 22-04-2016 SRM_RS11695 7bd0d10654579c00cdc8c6a95a95c6cf 817 Hamap MF_01871 UPF0753 protein . 7 788 23.919 T 22-04-2016 IPR018752 Uncharacterised protein family UPF0753 SRM_RS11695 7bd0d10654579c00cdc8c6a95a95c6cf 817 PANTHER PTHR38344 1 817 6.2E-220 T 22-04-2016 SRM_RS11445 5e527df2067564ce70fa0be2844a0617 435 PANTHER PTHR30337 6 289 3.2E-23 T 22-04-2016 SRM_RS11445 5e527df2067564ce70fa0be2844a0617 435 Pfam PF12850 Calcineurin-like phosphoesterase superfamily domain 8 221 5.1E-11 T 22-04-2016 IPR024654 Calcineurin-like phosphoesterase domain, lpxH type SRM_RS11445 5e527df2067564ce70fa0be2844a0617 435 SUPERFAMILY SSF56300 7 291 4.7E-37 T 22-04-2016 IPR029052 Metallo-dependent phosphatase-like SRM_RS11445 5e527df2067564ce70fa0be2844a0617 435 Gene3D G3DSA:3.60.21.10 7 241 5.4E-35 T 22-04-2016 IPR029052 Metallo-dependent phosphatase-like SRM_RS02255 8bfbe850833360c83d46df55e7b89fed 235 Pfam PF01169 Uncharacterized protein family UPF0016 21 83 6.8E-9 T 22-04-2016 IPR001727 Uncharacterised protein family UPF0016 GO:0016020 SRM_RS02255 8bfbe850833360c83d46df55e7b89fed 235 Pfam PF01169 Uncharacterized protein family UPF0016 130 203 1.8E-14 T 22-04-2016 IPR001727 Uncharacterised protein family UPF0016 GO:0016020 SRM_RS04250 24c854de0a2c870a33b15068b4718550 79 Pfam PF05534 HicB family 1 34 7.8E-9 T 22-04-2016 IPR008651 Uncharacterised protein family HicB SRM_RS04250 24c854de0a2c870a33b15068b4718550 79 SUPERFAMILY SSF47598 4 54 4.11E-9 T 22-04-2016 IPR010985 Ribbon-helix-helix GO:0006355 SRM_RS04250 24c854de0a2c870a33b15068b4718550 79 Gene3D G3DSA:1.10.1220.10 5 64 2.9E-8 T 22-04-2016 IPR013321 Arc-type ribbon-helix-helix GO:0006355 SRM_RS15375 4f1dbc2630453fea75eec4de3f068f19 345 Hamap MF_01350 NAD(P)H-quinone oxidoreductase subunit 1, chloroplastic [ndhA]. 4 340 24.748 T 22-04-2016 IPR001694 NADH:ubiquinone oxidoreductase, subunit 1/F420H2 oxidoreductase subunit H GO:0016020|GO:0055114 SRM_RS15375 4f1dbc2630453fea75eec4de3f068f19 345 PANTHER PTHR11432 1 345 3.4E-149 T 22-04-2016 IPR001694 NADH:ubiquinone oxidoreductase, subunit 1/F420H2 oxidoreductase subunit H GO:0016020|GO:0055114 SRM_RS15375 4f1dbc2630453fea75eec4de3f068f19 345 ProSitePatterns PS00668 Respiratory-chain NADH dehydrogenase subunit 1 signature 2. 210 223 - T 22-04-2016 IPR018086 NADH:ubiquinone oxidoreductase, subunit 1, conserved site GO:0016020|GO:0055114 SRM_RS15375 4f1dbc2630453fea75eec4de3f068f19 345 PANTHER PTHR11432:SF3 1 345 3.4E-149 T 22-04-2016 SRM_RS15375 4f1dbc2630453fea75eec4de3f068f19 345 Pfam PF00146 NADH dehydrogenase 13 333 5.1E-122 T 22-04-2016 IPR001694 NADH:ubiquinone oxidoreductase, subunit 1/F420H2 oxidoreductase subunit H GO:0016020|GO:0055114 SRM_RS10585 908b26792c868b153b5f664911bba263 844 PANTHER PTHR12815 42 479 2.0E-110 T 22-04-2016 SRM_RS10585 908b26792c868b153b5f664911bba263 844 PANTHER PTHR12815 495 843 2.0E-110 T 22-04-2016 SRM_RS10585 908b26792c868b153b5f664911bba263 844 Pfam PF07244 Surface antigen variable number repeat 375 451 1.6E-12 T 22-04-2016 IPR010827 Surface antigen variable number GO:0019867 SRM_RS10585 908b26792c868b153b5f664911bba263 844 Pfam PF07244 Surface antigen variable number repeat 289 372 1.9E-11 T 22-04-2016 IPR010827 Surface antigen variable number GO:0019867 SRM_RS10585 908b26792c868b153b5f664911bba263 844 Pfam PF07244 Surface antigen variable number repeat 200 286 3.5E-9 T 22-04-2016 IPR010827 Surface antigen variable number GO:0019867 SRM_RS10585 908b26792c868b153b5f664911bba263 844 Pfam PF07244 Surface antigen variable number repeat 133 194 5.9E-9 T 22-04-2016 IPR010827 Surface antigen variable number GO:0019867 SRM_RS10585 908b26792c868b153b5f664911bba263 844 PIRSF PIRSF006076 5 839 7.4E-191 T 22-04-2016 IPR023707 Outer membrane protein assembly factor BamA GO:0071709 SRM_RS10585 908b26792c868b153b5f664911bba263 844 Pfam PF01103 Surface antigen 496 839 7.2E-29 T 22-04-2016 IPR000184 Bacterial surface antigen (D15) GO:0019867 SRM_RS10585 908b26792c868b153b5f664911bba263 844 PANTHER PTHR12815:SF11 42 479 2.0E-110 T 22-04-2016 SRM_RS10585 908b26792c868b153b5f664911bba263 844 PANTHER PTHR12815:SF11 495 843 2.0E-110 T 22-04-2016 SRM_RS10585 908b26792c868b153b5f664911bba263 844 TIGRFAM TIGR03303 OM_YaeT: outer membrane protein assembly complex, YaeT protein 43 839 6.7E-117 T 22-04-2016 IPR023707 Outer membrane protein assembly factor BamA GO:0071709 SRM_RS15540 3a8bd90dcaa2aeaa08fa142851296fd4 132 PANTHER PTHR39426 1 122 9.8E-22 T 22-04-2016 SRM_RS15540 3a8bd90dcaa2aeaa08fa142851296fd4 132 PIRSF PIRSF018297 3 129 4.1E-43 T 22-04-2016 IPR006440 Death on curing protein GO:0016301 SRM_RS15540 3a8bd90dcaa2aeaa08fa142851296fd4 132 PANTHER PTHR39426:SF1 1 122 9.8E-22 T 22-04-2016 SRM_RS15540 3a8bd90dcaa2aeaa08fa142851296fd4 132 TIGRFAM TIGR01550 DOC_P1: death-on-curing family protein 15 122 1.1E-15 T 22-04-2016 IPR006440 Death on curing protein GO:0016301 SRM_RS15540 3a8bd90dcaa2aeaa08fa142851296fd4 132 Pfam PF02661 Fic/DOC family 6 87 5.7E-12 T 22-04-2016 IPR003812 Fido domain SRM_RS15540 3a8bd90dcaa2aeaa08fa142851296fd4 132 SUPERFAMILY SSF140931 35 96 2.88E-5 T 22-04-2016 IPR003812 Fido domain SRM_RS15655 27def583ddec9cd7469d910803d92506 513 Pfam PF00474 Sodium:solute symporter family 38 431 2.9E-72 T 22-04-2016 IPR001734 Sodium/solute symporter GO:0005215|GO:0006810|GO:0016020|GO:0055085 SRM_RS15655 27def583ddec9cd7469d910803d92506 513 PANTHER PTHR11819:SF7 7 471 1.5E-133 T 22-04-2016 SRM_RS15655 27def583ddec9cd7469d910803d92506 513 PANTHER PTHR11819 7 471 1.5E-133 T 22-04-2016 IPR001734 Sodium/solute symporter GO:0005215|GO:0006810|GO:0016020|GO:0055085 SRM_RS15655 27def583ddec9cd7469d910803d92506 513 TIGRFAM TIGR00813 sss: transporter, solute:sodium symporter (SSS) family 38 431 9.9E-95 T 22-04-2016 IPR001734 Sodium/solute symporter GO:0005215|GO:0006810|GO:0016020|GO:0055085 SRM_RS06060 81fcbddc78903e63eef5727de486d70f 217 PANTHER PTHR10513:SF16 12 203 1.1E-51 T 22-04-2016 SRM_RS06060 81fcbddc78903e63eef5727de486d70f 217 PANTHER PTHR10513 12 203 1.1E-51 T 22-04-2016 SRM_RS06060 81fcbddc78903e63eef5727de486d70f 217 Pfam PF01712 Deoxynucleoside kinase 14 203 2.4E-41 T 22-04-2016 IPR031314 Deoxynucleoside kinase domain SRM_RS06060 81fcbddc78903e63eef5727de486d70f 217 PIRSF PIRSF000705 3 212 4.1E-55 T 22-04-2016 IPR002624 Deoxynucleoside kinase GO:0005524|GO:0006139|GO:0019206 SRM_RS06060 81fcbddc78903e63eef5727de486d70f 217 Gene3D G3DSA:3.40.50.300 12 203 9.3E-49 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SRM_RS06060 81fcbddc78903e63eef5727de486d70f 217 SUPERFAMILY SSF52540 12 204 3.94E-43 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SRM_RS13515 48e459700d4cc20f97612a457643bb16 163 TIGRFAM TIGR00150 T6A_YjeE: tRNA threonylcarbamoyl adenosine modification protein YjeE 24 152 3.8E-32 T 22-04-2016 IPR003442 tRNA threonylcarbamoyl adenosine modification protein TsaE GO:0002949 SRM_RS13515 48e459700d4cc20f97612a457643bb16 163 Gene3D G3DSA:3.40.50.300 19 156 7.4E-41 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SRM_RS13515 48e459700d4cc20f97612a457643bb16 163 Pfam PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE 21 141 7.5E-34 T 22-04-2016 IPR003442 tRNA threonylcarbamoyl adenosine modification protein TsaE GO:0002949 SRM_RS13515 48e459700d4cc20f97612a457643bb16 163 PANTHER PTHR33540 18 149 9.5E-36 T 22-04-2016 SRM_RS13515 48e459700d4cc20f97612a457643bb16 163 SUPERFAMILY SSF52540 35 132 5.01E-16 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SRM_RS11020 30f85690275215f181892360516d51d1 75 Pfam PF11146 Protein of unknown function (DUF2905) 7 69 8.1E-20 T 22-04-2016 IPR021320 Protein of unknown function DUF2905 SRM_RS11020 30f85690275215f181892360516d51d1 75 PANTHER PTHR36443:SF1 3 75 1.6E-13 T 22-04-2016 SRM_RS11020 30f85690275215f181892360516d51d1 75 PANTHER PTHR36443 3 75 1.6E-13 T 22-04-2016 SRM_RS08410 817a58db40578589fe0c940f3fd4ca85 185 Hamap MF_00146 Deoxycytidine triphosphate deaminase [dcd]. 1 184 28.793 T 22-04-2016 IPR011962 Deoxycytidine triphosphate deaminase GO:0006229|GO:0008829 KEGG: 00240+3.5.4.13|MetaCyc: PWY-7187|UniPathway: UPA00610 SRM_RS08410 817a58db40578589fe0c940f3fd4ca85 185 TIGRFAM TIGR02274 dCTP_deam: deoxycytidine triphosphate deaminase 3 183 8.2E-46 T 22-04-2016 IPR011962 Deoxycytidine triphosphate deaminase GO:0006229|GO:0008829 KEGG: 00240+3.5.4.13|MetaCyc: PWY-7187|UniPathway: UPA00610 SRM_RS08410 817a58db40578589fe0c940f3fd4ca85 185 Gene3D G3DSA:2.70.40.10 1 183 2.1E-55 T 22-04-2016 IPR029054 dUTPase-like SRM_RS08410 817a58db40578589fe0c940f3fd4ca85 185 PANTHER PTHR11241:SF1 1 185 1.0E-61 T 22-04-2016 SRM_RS08410 817a58db40578589fe0c940f3fd4ca85 185 SUPERFAMILY SSF51283 1 183 3.4E-44 T 22-04-2016 IPR029054 dUTPase-like SRM_RS08410 817a58db40578589fe0c940f3fd4ca85 185 PANTHER PTHR11241 1 185 1.0E-61 T 22-04-2016 SRM_RS08410 817a58db40578589fe0c940f3fd4ca85 185 Pfam PF00692 dUTPase 67 179 1.1E-10 T 22-04-2016 IPR008180 Deoxyuridine triphosphate nucleotidohydrolase/Deoxycytidine triphosphate deaminase GO:0016787|GO:0046080 SRM_RS10300 cf45f41bfa43883ec3a0e6a1ddc6770a 187 SUPERFAMILY SSF75217 10 173 5.56E-34 T 22-04-2016 IPR029028 Alpha/beta knot methyltransferases SRM_RS10300 cf45f41bfa43883ec3a0e6a1ddc6770a 187 PANTHER PTHR12029:SF60 1 174 1.3E-43 T 22-04-2016 SRM_RS10300 cf45f41bfa43883ec3a0e6a1ddc6770a 187 Gene3D G3DSA:3.40.1280.10 21 174 7.9E-35 T 22-04-2016 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal SRM_RS10300 cf45f41bfa43883ec3a0e6a1ddc6770a 187 PANTHER PTHR12029 1 174 1.3E-43 T 22-04-2016 SRM_RS10300 cf45f41bfa43883ec3a0e6a1ddc6770a 187 Pfam PF00588 SpoU rRNA Methylase family 25 167 1.3E-28 T 22-04-2016 IPR001537 tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008173 SRM_RS10740 fff70b47870f89e148804cd427b24831 173 Gene3D G3DSA:1.10.357.10 10 108 6.7E-5 T 22-04-2016 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 SRM_RS12490 024ac1eedc449f930a773b8d3de72dcd 451 Gene3D G3DSA:3.50.50.60 12 115 2.8E-24 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SRM_RS12490 024ac1eedc449f930a773b8d3de72dcd 451 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 15 34 1.3E-13 T 22-04-2016 SRM_RS12490 024ac1eedc449f930a773b8d3de72dcd 451 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 166 184 1.3E-13 T 22-04-2016 SRM_RS12490 024ac1eedc449f930a773b8d3de72dcd 451 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 107 125 1.3E-13 T 22-04-2016 SRM_RS12490 024ac1eedc449f930a773b8d3de72dcd 451 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 288 310 1.3E-13 T 22-04-2016 SRM_RS12490 024ac1eedc449f930a773b8d3de72dcd 451 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 166 191 3.3E-10 T 22-04-2016 SRM_RS12490 024ac1eedc449f930a773b8d3de72dcd 451 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 249 263 3.3E-10 T 22-04-2016 SRM_RS12490 024ac1eedc449f930a773b8d3de72dcd 451 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 14 36 3.3E-10 T 22-04-2016 SRM_RS12490 024ac1eedc449f930a773b8d3de72dcd 451 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 303 310 3.3E-10 T 22-04-2016 SRM_RS12490 024ac1eedc449f930a773b8d3de72dcd 451 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 14 330 3.9E-59 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SRM_RS12490 024ac1eedc449f930a773b8d3de72dcd 451 PANTHER PTHR22912 202 337 2.7E-29 T 22-04-2016 SRM_RS12490 024ac1eedc449f930a773b8d3de72dcd 451 PANTHER PTHR22912 1 146 2.7E-29 T 22-04-2016 SRM_RS12490 024ac1eedc449f930a773b8d3de72dcd 451 PANTHER PTHR22912 168 186 2.7E-29 T 22-04-2016 SRM_RS12490 024ac1eedc449f930a773b8d3de72dcd 451 Gene3D G3DSA:3.50.50.60 116 337 1.3E-32 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SRM_RS12490 024ac1eedc449f930a773b8d3de72dcd 451 SUPERFAMILY SSF51905 4 342 4.99E-40 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SRM_RS11710 e4836568f0f1ee339dbd17af99e71578 256 SMART SM00271 10 68 4.5E-25 T 22-04-2016 IPR001623 DnaJ domain SRM_RS11710 e4836568f0f1ee339dbd17af99e71578 256 PRINTS PR00625 DnaJ domain signature 48 68 1.4E-16 T 22-04-2016 IPR001623 DnaJ domain SRM_RS11710 e4836568f0f1ee339dbd17af99e71578 256 PRINTS PR00625 DnaJ domain signature 31 46 1.4E-16 T 22-04-2016 IPR001623 DnaJ domain SRM_RS11710 e4836568f0f1ee339dbd17af99e71578 256 PRINTS PR00625 DnaJ domain signature 13 31 1.4E-16 T 22-04-2016 IPR001623 DnaJ domain SRM_RS11710 e4836568f0f1ee339dbd17af99e71578 256 SUPERFAMILY SSF46565 10 113 3.4E-25 T 22-04-2016 IPR001623 DnaJ domain SRM_RS11710 e4836568f0f1ee339dbd17af99e71578 256 Pfam PF00226 DnaJ domain 11 73 2.5E-24 T 22-04-2016 IPR001623 DnaJ domain SRM_RS11710 e4836568f0f1ee339dbd17af99e71578 256 Gene3D G3DSA:1.10.287.110 9 79 2.7E-25 T 22-04-2016 IPR001623 DnaJ domain SRM_RS11710 e4836568f0f1ee339dbd17af99e71578 256 ProSitePatterns PS00636 Nt-dnaJ domain signature. 53 72 - T 22-04-2016 IPR018253 DnaJ domain, conserved site SRM_RS11505 ec0ffac1ec1d6998df5b94bb9a13e08c 148 Pfam PF03703 Bacterial PH domain 70 143 1.3E-17 T 22-04-2016 IPR005182 Domain of unknown function DUF304 SRM_RS11505 ec0ffac1ec1d6998df5b94bb9a13e08c 148 PANTHER PTHR37938 34 146 1.2E-17 T 22-04-2016 SRM_RS12055 42bc8d7c753e0dcc2d2d87c1b1773db5 561 Pfam PF01935 Domain of unknown function DUF87 151 394 8.3E-37 T 22-04-2016 IPR002789 Helicase HerA, central domain SRM_RS12055 42bc8d7c753e0dcc2d2d87c1b1773db5 561 PANTHER PTHR30121:SF3 9 539 1.9E-144 T 22-04-2016 SRM_RS12055 42bc8d7c753e0dcc2d2d87c1b1773db5 561 SUPERFAMILY SSF52540 143 533 1.32E-27 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SRM_RS12055 42bc8d7c753e0dcc2d2d87c1b1773db5 561 Gene3D G3DSA:3.40.50.300 354 527 3.4E-20 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SRM_RS12055 42bc8d7c753e0dcc2d2d87c1b1773db5 561 Gene3D G3DSA:3.40.50.300 156 256 3.4E-20 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SRM_RS12055 42bc8d7c753e0dcc2d2d87c1b1773db5 561 PANTHER PTHR30121 9 539 1.9E-144 T 22-04-2016 SRM_RS10185 4717966749969fc945587435028aff4b 457 Gene3D G3DSA:3.30.70.1450 179 251 8.4E-14 T 22-04-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 SRM_RS10185 4717966749969fc945587435028aff4b 457 Gene3D G3DSA:3.30.70.1450 90 168 4.4E-10 T 22-04-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 SRM_RS10185 4717966749969fc945587435028aff4b 457 Pfam PF03600 Citrate transporter 1 400 2.7E-23 T 22-04-2016 IPR004680 Citrate transporter-like domain GO:0016021|GO:0055085 SRM_RS10185 4717966749969fc945587435028aff4b 457 SUPERFAMILY SSF116726 168 246 1.06E-13 T 22-04-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 SRM_RS10185 4717966749969fc945587435028aff4b 457 SUPERFAMILY SSF116726 90 164 8.11E-9 T 22-04-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 SRM_RS10185 4717966749969fc945587435028aff4b 457 PANTHER PTHR10283 297 455 2.2E-46 T 22-04-2016 SRM_RS10185 4717966749969fc945587435028aff4b 457 PANTHER PTHR10283 104 208 2.2E-46 T 22-04-2016 SRM_RS10185 4717966749969fc945587435028aff4b 457 PANTHER PTHR10283 1 70 2.2E-46 T 22-04-2016 SRM_RS10185 4717966749969fc945587435028aff4b 457 PANTHER PTHR10283:SF100 297 455 2.2E-46 T 22-04-2016 SRM_RS10185 4717966749969fc945587435028aff4b 457 PANTHER PTHR10283:SF100 104 208 2.2E-46 T 22-04-2016 SRM_RS10185 4717966749969fc945587435028aff4b 457 PANTHER PTHR10283:SF100 1 70 2.2E-46 T 22-04-2016 SRM_RS10185 4717966749969fc945587435028aff4b 457 Pfam PF02080 TrkA-C domain 180 246 1.0E-6 T 22-04-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 SRM_RS12555 9318bffc5ca7e003efecdb58d076ce57 156 Pfam PF00989 PAS fold 55 140 1.4E-5 T 22-04-2016 IPR013767 PAS fold GO:0006355 SRM_RS12555 9318bffc5ca7e003efecdb58d076ce57 156 Gene3D G3DSA:3.30.450.20 33 154 1.5E-37 T 22-04-2016 SRM_RS12555 9318bffc5ca7e003efecdb58d076ce57 156 SUPERFAMILY SSF55785 52 148 8.9E-20 T 22-04-2016 IPR000014 PAS domain SRM_RS08055 dc0956cf1b6354d0e755237759957572 206 Gene3D G3DSA:2.60.450.10 109 185 1.3E-5 T 22-04-2016 SRM_RS08055 dc0956cf1b6354d0e755237759957572 206 Pfam PF06835 Lipopolysaccharide-assembly, LptC-related 59 187 7.1E-13 T 22-04-2016 IPR010664 Lipopolysaccharide assembly, LptC-related SRM_RS08055 dc0956cf1b6354d0e755237759957572 206 TIGRFAM TIGR04409 LptC_YrbK: LPS export ABC transporter periplasmic protein LptC 15 187 2.2E-18 T 22-04-2016 IPR026265 Lipopolysaccharide export system protein LptC GO:0005887|GO:0015221|GO:0015920 SRM_RS03210 5759c35a0de17574c8dce4061053e466 98 Pfam PF08447 PAS fold 13 94 5.9E-6 T 22-04-2016 IPR013655 PAS fold-3 GO:0005515 SRM_RS03210 5759c35a0de17574c8dce4061053e466 98 SUPERFAMILY SSF55785 2 88 2.9E-11 T 22-04-2016 IPR000014 PAS domain SRM_RS03210 5759c35a0de17574c8dce4061053e466 98 Gene3D G3DSA:3.30.450.20 2 85 3.3E-9 T 22-04-2016 SRM_RS09590 9e9c6270f6378ab53c37f1dd9c60eba7 424 Pfam PF02308 MgtC family 13 138 6.7E-16 T 22-04-2016 IPR003416 MgtC/SapB/SrpB/YhiD family GO:0016020 SRM_RS09590 9e9c6270f6378ab53c37f1dd9c60eba7 424 Pfam PF13194 Domain of unknown function (DUF4010) 189 398 5.8E-70 T 22-04-2016 IPR025105 Domain of unknown function DUF4010 SRM_RS08405 91b8abbdc51f612ed723ef3d7d65e69a 293 Pfam PF08889 WbqC-like protein family 72 277 1.3E-47 T 22-04-2016 IPR014985 WbqC-like protein family SRM_RS13580 2b61eab094b2b0959bb76a02a742279b 207 ProSitePatterns PS00194 Thioredoxin family active site. 89 107 - T 22-04-2016 IPR017937 Thioredoxin, conserved site GO:0045454 SRM_RS13580 2b61eab094b2b0959bb76a02a742279b 207 SUPERFAMILY SSF52833 73 193 9.71E-22 T 22-04-2016 IPR012336 Thioredoxin-like fold SRM_RS13580 2b61eab094b2b0959bb76a02a742279b 207 Gene3D G3DSA:3.40.30.10 76 192 1.2E-26 T 22-04-2016 IPR012336 Thioredoxin-like fold SRM_RS13580 2b61eab094b2b0959bb76a02a742279b 207 Pfam PF13098 Thioredoxin-like domain 81 185 6.0E-14 T 22-04-2016 IPR012336 Thioredoxin-like fold SRM_RS12210 e7b282109e46bc6b7530380a066e1702 270 PANTHER PTHR10438:SF264 3 117 4.9E-33 T 22-04-2016 SRM_RS12210 e7b282109e46bc6b7530380a066e1702 270 Gene3D G3DSA:1.25.40.10 205 270 1.0E-14 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 SRM_RS12210 e7b282109e46bc6b7530380a066e1702 270 Pfam PF14561 Tetratricopeptide repeat 203 270 7.2E-14 T 22-04-2016 SRM_RS12210 e7b282109e46bc6b7530380a066e1702 270 Gene3D G3DSA:3.40.30.10 6 104 1.2E-31 T 22-04-2016 IPR012336 Thioredoxin-like fold SRM_RS12210 e7b282109e46bc6b7530380a066e1702 270 Gene3D G3DSA:1.25.40.10 105 164 1.1E-7 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 SRM_RS12210 e7b282109e46bc6b7530380a066e1702 270 ProSitePatterns PS00194 Thioredoxin family active site. 22 40 - T 22-04-2016 IPR017937 Thioredoxin, conserved site GO:0045454 SRM_RS12210 e7b282109e46bc6b7530380a066e1702 270 SUPERFAMILY SSF52833 6 106 2.9E-35 T 22-04-2016 IPR012336 Thioredoxin-like fold SRM_RS12210 e7b282109e46bc6b7530380a066e1702 270 PANTHER PTHR10438 3 117 4.9E-33 T 22-04-2016 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 SRM_RS12210 e7b282109e46bc6b7530380a066e1702 270 PRINTS PR00421 Thioredoxin family signature 29 38 1.1E-6 T 22-04-2016 SRM_RS12210 e7b282109e46bc6b7530380a066e1702 270 PRINTS PR00421 Thioredoxin family signature 21 29 1.1E-6 T 22-04-2016 SRM_RS12210 e7b282109e46bc6b7530380a066e1702 270 PRINTS PR00421 Thioredoxin family signature 68 79 1.1E-6 T 22-04-2016 SRM_RS12210 e7b282109e46bc6b7530380a066e1702 270 Pfam PF00085 Thioredoxin 5 103 2.0E-26 T 22-04-2016 IPR013766 Thioredoxin domain GO:0045454 SRM_RS12655 7921bf369f555f87e9edf5f50c7b15e6 92 PANTHER PTHR30154:SF12 1 86 8.6E-16 T 22-04-2016 SRM_RS12655 7921bf369f555f87e9edf5f50c7b15e6 92 Pfam PF01037 Lrp/AsnC ligand binding domain 6 74 1.3E-14 T 22-04-2016 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain SRM_RS12655 7921bf369f555f87e9edf5f50c7b15e6 92 Gene3D G3DSA:3.30.70.920 3 76 2.6E-22 T 22-04-2016 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain SRM_RS12655 7921bf369f555f87e9edf5f50c7b15e6 92 PANTHER PTHR30154 1 86 8.6E-16 T 22-04-2016 SRM_RS12655 7921bf369f555f87e9edf5f50c7b15e6 92 SUPERFAMILY SSF54909 1 76 4.83E-17 T 22-04-2016 IPR011008 Dimeric alpha-beta barrel SRM_RS05130 1a1e5d80b231965db89b5ad0ad4e81e9 203 PANTHER PTHR10108:SF827 27 201 1.3E-37 T 22-04-2016 SRM_RS05130 1a1e5d80b231965db89b5ad0ad4e81e9 203 Pfam PF08241 Methyltransferase domain 40 133 2.1E-19 T 22-04-2016 IPR013216 Methyltransferase type 11 GO:0008152|GO:0008168 SRM_RS05130 1a1e5d80b231965db89b5ad0ad4e81e9 203 SUPERFAMILY SSF53335 28 187 1.26E-32 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SRM_RS05130 1a1e5d80b231965db89b5ad0ad4e81e9 203 PANTHER PTHR10108 27 201 1.3E-37 T 22-04-2016 SRM_RS05130 1a1e5d80b231965db89b5ad0ad4e81e9 203 Gene3D G3DSA:3.40.50.150 26 194 1.6E-26 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SRM_RS01910 8bbffb9e7e9d4733de7ae80235850d91 165 SUPERFAMILY SSF52540 111 152 4.91E-15 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SRM_RS01910 8bbffb9e7e9d4733de7ae80235850d91 165 SUPERFAMILY SSF52540 7 74 4.91E-15 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SRM_RS01910 8bbffb9e7e9d4733de7ae80235850d91 165 Pfam PF00685 Sulfotransferase domain 8 57 3.1E-5 T 22-04-2016 IPR000863 Sulfotransferase domain GO:0008146 SRM_RS01910 8bbffb9e7e9d4733de7ae80235850d91 165 Gene3D G3DSA:3.40.50.300 6 149 3.1E-18 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SRM_RS10965 ae342c6e2f1746cde167d27194f90665 330 SUPERFAMILY SSF141072 41 160 1.7E-8 T 22-04-2016 SRM_RS10965 ae342c6e2f1746cde167d27194f90665 330 Pfam PF16409 Domain of unknown function (DUF5017) 229 310 2.3E-13 T 22-04-2016 IPR032185 Domain of unknown function DUF5017 SRM_RS05715 da2d239641b7c71e90a584d35eee2ac8 371 PANTHER PTHR30566:SF10 90 354 7.9E-75 T 22-04-2016 SRM_RS05715 da2d239641b7c71e90a584d35eee2ac8 371 PANTHER PTHR30566 90 354 7.9E-75 T 22-04-2016 SRM_RS05715 da2d239641b7c71e90a584d35eee2ac8 371 Pfam PF00924 Mechanosensitive ion channel 162 345 1.6E-26 T 22-04-2016 IPR006685 Mechanosensitive ion channel MscS GO:0016020|GO:0055085 SRM_RS05715 da2d239641b7c71e90a584d35eee2ac8 371 SUPERFAMILY SSF50182 193 258 6.54E-14 T 22-04-2016 IPR010920 LSM domain SRM_RS05715 da2d239641b7c71e90a584d35eee2ac8 371 Gene3D G3DSA:2.30.30.60 208 257 8.9E-8 T 22-04-2016 SRM_RS12390 334a0d8cdd12d371b4ae0de1bd47c10e 145 Pfam PF07386 Protein of unknown function (DUF1499) 30 133 4.0E-18 T 22-04-2016 IPR010865 Protein of unknown function DUF1499 SRM_RS03825 a40003f665c1bed467e91b678511479f 455 PANTHER PTHR30511 56 430 5.5E-132 T 22-04-2016 SRM_RS03825 a40003f665c1bed467e91b678511479f 455 Gene3D G3DSA:2.40.37.10 278 425 2.0E-53 T 22-04-2016 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 Reactome: REACT_13 SRM_RS03825 a40003f665c1bed467e91b678511479f 455 SMART SM01005 295 425 4.2E-66 T 22-04-2016 IPR011079 Alanine racemase, C-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 SRM_RS03825 a40003f665c1bed467e91b678511479f 455 TIGRFAM TIGR00492 alr: alanine racemase 59 425 6.6E-93 T 22-04-2016 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 SRM_RS03825 a40003f665c1bed467e91b678511479f 455 SUPERFAMILY SSF50621 288 426 5.93E-46 T 22-04-2016 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 Reactome: REACT_13 SRM_RS03825 a40003f665c1bed467e91b678511479f 455 Pfam PF01168 Alanine racemase, N-terminal domain 63 280 3.5E-64 T 22-04-2016 IPR001608 Alanine racemase, N-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 SRM_RS03825 a40003f665c1bed467e91b678511479f 455 ProSitePatterns PS00395 Alanine racemase pyridoxal-phosphate attachment site. 86 96 - T 22-04-2016 IPR020622 Alanine racemase, pyridoxal-phosphate attachment site KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 SRM_RS03825 a40003f665c1bed467e91b678511479f 455 PANTHER PTHR30511:SF0 56 430 5.5E-132 T 22-04-2016 SRM_RS03825 a40003f665c1bed467e91b678511479f 455 Gene3D G3DSA:3.20.20.10 65 277 7.8E-67 T 22-04-2016 IPR029066 PLP-binding barrel SRM_RS03825 a40003f665c1bed467e91b678511479f 455 Pfam PF00842 Alanine racemase, C-terminal domain 295 423 1.9E-42 T 22-04-2016 IPR011079 Alanine racemase, C-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 SRM_RS03825 a40003f665c1bed467e91b678511479f 455 Hamap MF_01201 Alanine racemase. 56 425 32.544 T 22-04-2016 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 SRM_RS03825 a40003f665c1bed467e91b678511479f 455 SUPERFAMILY SSF51419 63 296 8.29E-62 T 22-04-2016 IPR029066 PLP-binding barrel SRM_RS03825 a40003f665c1bed467e91b678511479f 455 PRINTS PR00992 Alanine racemase signature 177 189 8.1E-50 T 22-04-2016 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 SRM_RS03825 a40003f665c1bed467e91b678511479f 455 PRINTS PR00992 Alanine racemase signature 311 326 8.1E-50 T 22-04-2016 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 SRM_RS03825 a40003f665c1bed467e91b678511479f 455 PRINTS PR00992 Alanine racemase signature 349 366 8.1E-50 T 22-04-2016 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 SRM_RS03825 a40003f665c1bed467e91b678511479f 455 PRINTS PR00992 Alanine racemase signature 117 135 8.1E-50 T 22-04-2016 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 SRM_RS03825 a40003f665c1bed467e91b678511479f 455 PRINTS PR00992 Alanine racemase signature 211 222 8.1E-50 T 22-04-2016 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 SRM_RS03825 a40003f665c1bed467e91b678511479f 455 PRINTS PR00992 Alanine racemase signature 255 282 8.1E-50 T 22-04-2016 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 SRM_RS03825 a40003f665c1bed467e91b678511479f 455 PRINTS PR00992 Alanine racemase signature 407 420 8.1E-50 T 22-04-2016 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 SRM_RS03825 a40003f665c1bed467e91b678511479f 455 PRINTS PR00992 Alanine racemase signature 328 343 8.1E-50 T 22-04-2016 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 SRM_RS03825 a40003f665c1bed467e91b678511479f 455 PRINTS PR00992 Alanine racemase signature 81 97 8.1E-50 T 22-04-2016 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 SRM_RS14565 e0fd5b890213b33d65b695b904a1c06b 119 SUPERFAMILY SSF101498 25 103 3.4E-5 T 22-04-2016 IPR007412 Anti-sigma-28 factor, FlgM GO:0045892 SRM_RS12990 e55ddd32097feef6c2e100ab7e795e6f 445 PIRSF PIRSF006060 3 435 2.1E-62 T 22-04-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 SRM_RS12990 e55ddd32097feef6c2e100ab7e795e6f 445 PANTHER PTHR11785 12 428 4.1E-80 T 22-04-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 SRM_RS12990 e55ddd32097feef6c2e100ab7e795e6f 445 Pfam PF13520 Amino acid permease 12 406 2.9E-55 T 22-04-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 SRM_RS12990 e55ddd32097feef6c2e100ab7e795e6f 445 PANTHER PTHR11785:SF261 12 428 4.1E-80 T 22-04-2016 SRM_RS02170 a31da4ecf1d83912bd35918a282141d7 390 Pfam PF12412 Protein of unknown function (DUF3667) 120 162 2.5E-10 T 22-04-2016 IPR022134 Protein of unknown function DUF3667 SRM_RS02415 f1e6e469e11d05df6adef891998469a6 908 Pfam PF02867 Ribonucleotide reductase, barrel domain 146 713 1.7E-109 T 22-04-2016 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227 SRM_RS02415 f1e6e469e11d05df6adef891998469a6 908 PANTHER PTHR11573:SF3 645 740 2.0E-129 T 22-04-2016 SRM_RS02415 f1e6e469e11d05df6adef891998469a6 908 PANTHER PTHR11573:SF3 65 613 2.0E-129 T 22-04-2016 SRM_RS02415 f1e6e469e11d05df6adef891998469a6 908 PANTHER PTHR11573:SF3 769 859 2.0E-129 T 22-04-2016 SRM_RS02415 f1e6e469e11d05df6adef891998469a6 908 PANTHER PTHR11573 645 740 2.0E-129 T 22-04-2016 SRM_RS02415 f1e6e469e11d05df6adef891998469a6 908 PANTHER PTHR11573 65 613 2.0E-129 T 22-04-2016 SRM_RS02415 f1e6e469e11d05df6adef891998469a6 908 PANTHER PTHR11573 769 859 2.0E-129 T 22-04-2016 SRM_RS02415 f1e6e469e11d05df6adef891998469a6 908 Gene3D G3DSA:3.20.70.20 337 492 2.0E-113 T 22-04-2016 SRM_RS02415 f1e6e469e11d05df6adef891998469a6 908 Gene3D G3DSA:3.20.70.20 51 277 2.0E-113 T 22-04-2016 SRM_RS02415 f1e6e469e11d05df6adef891998469a6 908 Gene3D G3DSA:3.20.70.20 527 573 2.0E-113 T 22-04-2016 SRM_RS02415 f1e6e469e11d05df6adef891998469a6 908 Gene3D G3DSA:3.20.70.20 671 718 2.0E-113 T 22-04-2016 SRM_RS02415 f1e6e469e11d05df6adef891998469a6 908 TIGRFAM TIGR02504 NrdJ_Z: ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent 84 719 7.8E-131 T 22-04-2016 IPR013344 Ribonucleotide reductase, adenosylcobalamin-dependent GO:0000166|GO:0004748|GO:0031419|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227 SRM_RS02415 f1e6e469e11d05df6adef891998469a6 908 PRINTS PR01183 Ribonucleotide reductase large chain signature 472 495 1.1E-22 T 22-04-2016 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227 SRM_RS02415 f1e6e469e11d05df6adef891998469a6 908 PRINTS PR01183 Ribonucleotide reductase large chain signature 527 554 1.1E-22 T 22-04-2016 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227 SRM_RS02415 f1e6e469e11d05df6adef891998469a6 908 PRINTS PR01183 Ribonucleotide reductase large chain signature 406 429 1.1E-22 T 22-04-2016 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227 SRM_RS02415 f1e6e469e11d05df6adef891998469a6 908 PRINTS PR01183 Ribonucleotide reductase large chain signature 371 382 1.1E-22 T 22-04-2016 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227 SRM_RS02415 f1e6e469e11d05df6adef891998469a6 908 PRINTS PR01183 Ribonucleotide reductase large chain signature 444 466 1.1E-22 T 22-04-2016 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227 SRM_RS02415 f1e6e469e11d05df6adef891998469a6 908 PRINTS PR01183 Ribonucleotide reductase large chain signature 235 254 1.1E-22 T 22-04-2016 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227 SRM_RS02415 f1e6e469e11d05df6adef891998469a6 908 SUPERFAMILY SSF51998 143 566 4.27E-112 T 22-04-2016 SRM_RS02415 f1e6e469e11d05df6adef891998469a6 908 SUPERFAMILY SSF51998 645 715 4.27E-112 T 22-04-2016 SRM_RS04930 c35a1a06b36711bc147ad255799663b9 349 TIGRFAM TIGR03753 blh_monoox: beta-carotene 15,15'-monooxygenase, Brp/Blh family 59 336 4.7E-56 T 22-04-2016 IPR022270 Beta-carotene 15,15'-monooxygenase, Brp/Blh family GO:0016702|GO:0055114 KEGG: 00830+1.13.11.63|MetaCyc: PWY-6857 SRM_RS04930 c35a1a06b36711bc147ad255799663b9 349 Pfam PF15461 Beta-carotene 15,15'-dioxygenase 61 340 8.4E-68 T 22-04-2016 IPR022270 Beta-carotene 15,15'-monooxygenase, Brp/Blh family GO:0016702|GO:0055114 KEGG: 00830+1.13.11.63|MetaCyc: PWY-6857 SRM_RS15385 7a1d3087295ba86c086b1edff4a26809 223 SUPERFAMILY SSF46689 14 95 3.25E-17 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 SRM_RS15385 7a1d3087295ba86c086b1edff4a26809 223 PANTHER PTHR30055 6 188 2.2E-30 T 22-04-2016 SRM_RS15385 7a1d3087295ba86c086b1edff4a26809 223 Pfam PF13305 WHG domain 99 190 9.5E-12 T 22-04-2016 IPR025996 WHG domain SRM_RS15385 7a1d3087295ba86c086b1edff4a26809 223 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 47 70 9.0E-6 T 22-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 SRM_RS15385 7a1d3087295ba86c086b1edff4a26809 223 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 26 39 9.0E-6 T 22-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 SRM_RS15385 7a1d3087295ba86c086b1edff4a26809 223 Gene3D G3DSA:1.10.357.10 14 213 3.8E-41 T 22-04-2016 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 SRM_RS15385 7a1d3087295ba86c086b1edff4a26809 223 Pfam PF00440 Bacterial regulatory proteins, tetR family 26 72 1.5E-13 T 22-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 SRM_RS15385 7a1d3087295ba86c086b1edff4a26809 223 SUPERFAMILY SSF48498 92 189 2.81E-14 T 22-04-2016 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal SRM_RS05810 598ad2f007ad69866e1e627f7bf82dfb 298 PANTHER PTHR21666 174 295 4.7E-29 T 22-04-2016 SRM_RS05810 598ad2f007ad69866e1e627f7bf82dfb 298 Pfam PF01551 Peptidase family M23 196 289 3.7E-23 T 22-04-2016 IPR016047 Peptidase M23 SRM_RS05810 598ad2f007ad69866e1e627f7bf82dfb 298 Gene3D G3DSA:2.70.70.10 160 295 7.5E-32 T 22-04-2016 SRM_RS05810 598ad2f007ad69866e1e627f7bf82dfb 298 SUPERFAMILY SSF51261 166 295 1.52E-35 T 22-04-2016 IPR011055 Duplicated hybrid motif SRM_RS08050 037fd38a8b86ab5f1bcd1643452479cf 113 PANTHER PTHR33495 13 113 9.1E-19 T 22-04-2016 SRM_RS08050 037fd38a8b86ab5f1bcd1643452479cf 113 Pfam PF01740 STAS domain 11 107 1.4E-14 T 22-04-2016 IPR002645 STAS domain SRM_RS08050 037fd38a8b86ab5f1bcd1643452479cf 113 SUPERFAMILY SSF52091 11 111 1.12E-21 T 22-04-2016 IPR002645 STAS domain SRM_RS08050 037fd38a8b86ab5f1bcd1643452479cf 113 Gene3D G3DSA:3.30.750.24 9 111 3.9E-24 T 22-04-2016 IPR002645 STAS domain SRM_RS01460 296e4885ad245f48e1e1911147df11f2 308 Pfam PF01963 TraB family 44 307 8.1E-73 T 22-04-2016 IPR002816 Pheromone shutdown, TraB SRM_RS01460 296e4885ad245f48e1e1911147df11f2 308 PANTHER PTHR40590 17 308 2.2E-44 T 22-04-2016 SRM_RS06405 446cf84f394b679f9eafec7a0952fead 164 PIRSF PIRSF005859 8 164 1.1E-44 T 22-04-2016 IPR004307 TspO/MBR-related protein GO:0016021 SRM_RS06405 446cf84f394b679f9eafec7a0952fead 164 Pfam PF03073 TspO/MBR family 18 161 1.8E-44 T 22-04-2016 IPR004307 TspO/MBR-related protein GO:0016021 SRM_RS06405 446cf84f394b679f9eafec7a0952fead 164 PANTHER PTHR10057 5 164 2.5E-44 T 22-04-2016 IPR004307 TspO/MBR-related protein GO:0016021 SRM_RS05345 761faeb9ef9e073fa48728c27abfe03b 335 Gene3D G3DSA:3.30.420.150 139 328 1.1E-40 T 22-04-2016 SRM_RS05345 761faeb9ef9e073fa48728c27abfe03b 335 SUPERFAMILY SSF53067 144 328 2.94E-29 T 22-04-2016 SRM_RS05345 761faeb9ef9e073fa48728c27abfe03b 335 PANTHER PTHR30005 6 327 1.8E-59 T 22-04-2016 SRM_RS05345 761faeb9ef9e073fa48728c27abfe03b 335 SUPERFAMILY SSF53067 17 138 1.49E-29 T 22-04-2016 SRM_RS05345 761faeb9ef9e073fa48728c27abfe03b 335 Gene3D G3DSA:3.30.420.40 14 136 3.5E-36 T 22-04-2016 SRM_RS05345 761faeb9ef9e073fa48728c27abfe03b 335 Pfam PF02541 Ppx/GppA phosphatase family 32 328 2.4E-49 T 22-04-2016 IPR003695 Ppx/GppA phosphatase KEGG: 00230+3.6.1.40|UniPathway: UPA00908 SRM_RS14385 182790033577fdd3cb997d218de7760d 89 PIRSF PIRSF004669 1 89 3.4E-32 T 22-04-2016 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 SRM_RS14385 182790033577fdd3cb997d218de7760d 89 PANTHER PTHR34040 1 89 9.3E-32 T 22-04-2016 SRM_RS14385 182790033577fdd3cb997d218de7760d 89 TIGRFAM TIGR01402 fliQ: flagellar biosynthetic protein FliQ 1 87 1.3E-28 T 22-04-2016 IPR006305 Flagellar biosynthesis protein FliQ GO:0016021|GO:0044780 SRM_RS14385 182790033577fdd3cb997d218de7760d 89 Pfam PF01313 Bacterial export proteins, family 3 7 77 4.7E-26 T 22-04-2016 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 SRM_RS14385 182790033577fdd3cb997d218de7760d 89 PANTHER PTHR34040:SF2 1 89 9.3E-32 T 22-04-2016 SRM_RS14385 182790033577fdd3cb997d218de7760d 89 PRINTS PR00952 Type III secretion system inner membrane Q protein family signature 54 76 1.5E-17 T 22-04-2016 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 SRM_RS14385 182790033577fdd3cb997d218de7760d 89 PRINTS PR00952 Type III secretion system inner membrane Q protein family signature 18 39 1.5E-17 T 22-04-2016 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 SRM_RS14385 182790033577fdd3cb997d218de7760d 89 PRINTS PR00952 Type III secretion system inner membrane Q protein family signature 39 54 1.5E-17 T 22-04-2016 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 SRM_RS07255 23be157d68098ead89edda8e46279e68 285 SMART SM00849 48 258 8.3E-12 T 22-04-2016 IPR001279 Metallo-beta-lactamase SRM_RS07255 23be157d68098ead89edda8e46279e68 285 SUPERFAMILY SSF56281 3 277 2.36E-33 T 22-04-2016 IPR001279 Metallo-beta-lactamase SRM_RS07255 23be157d68098ead89edda8e46279e68 285 Gene3D G3DSA:3.60.15.10 4 274 1.0E-40 T 22-04-2016 IPR001279 Metallo-beta-lactamase SRM_RS07255 23be157d68098ead89edda8e46279e68 285 PANTHER PTHR23200 3 284 4.3E-66 T 22-04-2016 SRM_RS07255 23be157d68098ead89edda8e46279e68 285 PANTHER PTHR23200:SF41 3 284 4.3E-66 T 22-04-2016 SRM_RS07255 23be157d68098ead89edda8e46279e68 285 Pfam PF00753 Metallo-beta-lactamase superfamily 51 258 3.1E-17 T 22-04-2016 IPR001279 Metallo-beta-lactamase SRM_RS09380 f1a7a4973bed7d8de3d199dfab6d3daf 941 Pfam PF13491 4TM region of DNA translocase FtsK/SpoIIIE 42 222 2.6E-26 T 22-04-2016 IPR025199 DNA translocase FtsK, 4TM region SRM_RS09380 f1a7a4973bed7d8de3d199dfab6d3daf 941 Pfam PF01580 FtsK/SpoIIIE family 553 758 2.7E-48 T 22-04-2016 IPR002543 FtsK domain GO:0000166|GO:0003677|GO:0005524 SRM_RS09380 f1a7a4973bed7d8de3d199dfab6d3daf 941 SMART SM00843 856 921 1.2E-33 T 22-04-2016 IPR018541 FtsK gamma domain SRM_RS09380 f1a7a4973bed7d8de3d199dfab6d3daf 941 Pfam PF09397 Ftsk gamma domain 858 918 3.7E-26 T 22-04-2016 IPR018541 FtsK gamma domain SRM_RS09380 f1a7a4973bed7d8de3d199dfab6d3daf 941 PANTHER PTHR22683 380 924 5.6E-182 T 22-04-2016 SRM_RS09380 f1a7a4973bed7d8de3d199dfab6d3daf 941 Gene3D G3DSA:3.40.50.300 528 822 6.7E-73 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SRM_RS09380 f1a7a4973bed7d8de3d199dfab6d3daf 941 SUPERFAMILY SSF46785 857 921 3.26E-19 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SRM_RS09380 f1a7a4973bed7d8de3d199dfab6d3daf 941 SUPERFAMILY SSF52540 527 828 3.04E-40 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SRM_RS09380 f1a7a4973bed7d8de3d199dfab6d3daf 941 PANTHER PTHR22683:SF41 380 924 5.6E-182 T 22-04-2016 SRM_RS05555 a0cc8cdcbe5a450434ad9905b0684ec4 609 SUPERFAMILY SSF56112 37 205 2.63E-14 T 22-04-2016 IPR011009 Protein kinase-like domain SRM_RS05555 a0cc8cdcbe5a450434ad9905b0684ec4 609 Pfam PF00069 Protein kinase domain 44 228 6.9E-7 T 22-04-2016 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 SRM_RS05555 a0cc8cdcbe5a450434ad9905b0684ec4 609 Gene3D G3DSA:1.10.510.10 106 228 4.2E-4 T 22-04-2016 SRM_RS07570 22459d5433d43d8971696255aa3f7db9 219 PIRSF PIRSF000705 2 215 5.6E-66 T 22-04-2016 IPR002624 Deoxynucleoside kinase GO:0005524|GO:0006139|GO:0019206 SRM_RS07570 22459d5433d43d8971696255aa3f7db9 219 PANTHER PTHR10513:SF17 1 210 8.5E-77 T 22-04-2016 SRM_RS07570 22459d5433d43d8971696255aa3f7db9 219 Pfam PF01712 Deoxynucleoside kinase 16 210 3.3E-62 T 22-04-2016 IPR031314 Deoxynucleoside kinase domain SRM_RS07570 22459d5433d43d8971696255aa3f7db9 219 Gene3D G3DSA:3.40.50.300 13 210 1.1E-61 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SRM_RS07570 22459d5433d43d8971696255aa3f7db9 219 SUPERFAMILY SSF52540 12 213 2.08E-48 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SRM_RS07570 22459d5433d43d8971696255aa3f7db9 219 PANTHER PTHR10513 1 210 8.5E-77 T 22-04-2016 SRM_RS11055 84dd3d561e7fc6a01be06b8cc677e1ee 394 Gene3D G3DSA:3.60.70.12 26 382 1.0E-129 T 22-04-2016 IPR016117 ArgJ-like domain KEGG: 00220+2.3.1.35+2.3.1.1|MetaCyc: PWY-5154|UniPathway: UPA00068|UniPathway: UPA00068 SRM_RS11055 84dd3d561e7fc6a01be06b8cc677e1ee 394 Pfam PF03576 Peptidase family S58 44 365 1.4E-115 T 22-04-2016 IPR005321 Peptidase S58, DmpA SRM_RS11055 84dd3d561e7fc6a01be06b8cc677e1ee 394 SUPERFAMILY SSF56266 27 384 5.49E-103 T 22-04-2016 IPR016117 ArgJ-like domain KEGG: 00220+2.3.1.35+2.3.1.1|MetaCyc: PWY-5154|UniPathway: UPA00068|UniPathway: UPA00068 SRM_RS11055 84dd3d561e7fc6a01be06b8cc677e1ee 394 PANTHER PTHR36512 26 381 1.6E-88 T 22-04-2016 SRM_RS11055 84dd3d561e7fc6a01be06b8cc677e1ee 394 PANTHER PTHR36512:SF1 26 381 1.6E-88 T 22-04-2016 SRM_RS07040 812afb385b25a9f2cbb57f91e87eefbc 546 PANTHER PTHR22642:SF2 26 537 4.0E-184 T 22-04-2016 SRM_RS07040 812afb385b25a9f2cbb57f91e87eefbc 546 SUPERFAMILY SSF51338 496 540 1.63E-22 T 22-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 SRM_RS07040 812afb385b25a9f2cbb57f91e87eefbc 546 SUPERFAMILY SSF51338 5 65 1.63E-22 T 22-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 SRM_RS07040 812afb385b25a9f2cbb57f91e87eefbc 546 Gene3D G3DSA:2.30.40.10 483 526 8.1E-5 T 22-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 SRM_RS07040 812afb385b25a9f2cbb57f91e87eefbc 546 Pfam PF07969 Amidohydrolase family 55 537 9.1E-107 T 22-04-2016 IPR013108 Amidohydrolase 3 SRM_RS07040 812afb385b25a9f2cbb57f91e87eefbc 546 SUPERFAMILY SSF51556 64 127 8.85E-36 T 22-04-2016 IPR032466 Metal-dependent hydrolase SRM_RS07040 812afb385b25a9f2cbb57f91e87eefbc 546 SUPERFAMILY SSF51556 206 497 8.85E-36 T 22-04-2016 IPR032466 Metal-dependent hydrolase SRM_RS07040 812afb385b25a9f2cbb57f91e87eefbc 546 Gene3D G3DSA:3.20.20.140 208 482 6.5E-35 T 22-04-2016 SRM_RS07040 812afb385b25a9f2cbb57f91e87eefbc 546 Gene3D G3DSA:2.30.40.10 2 96 1.5E-21 T 22-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 SRM_RS07040 812afb385b25a9f2cbb57f91e87eefbc 546 PANTHER PTHR22642 26 537 4.0E-184 T 22-04-2016 SRM_RS10205 93f6c92ef7407185936a97bc59939088 273 Hamap MF_01805 Segregation and condensation protein A [scpA]. 2 240 21.362 T 22-04-2016 IPR003768 Segregation and condensation protein A SRM_RS10205 93f6c92ef7407185936a97bc59939088 273 PANTHER PTHR33969:SF2 1 259 1.5E-63 T 22-04-2016 SRM_RS10205 93f6c92ef7407185936a97bc59939088 273 PANTHER PTHR33969 1 259 1.5E-63 T 22-04-2016 SRM_RS10205 93f6c92ef7407185936a97bc59939088 273 Pfam PF02616 Segregation and condensation protein ScpA 20 236 4.9E-33 T 22-04-2016 IPR003768 Segregation and condensation protein A SRM_RS13135 d276d405eccc40ec2a8f246f8c874a1a 130 SUPERFAMILY SSF54593 3 129 2.01E-27 T 22-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase SRM_RS13135 d276d405eccc40ec2a8f246f8c874a1a 130 Gene3D G3DSA:3.10.180.10 1 129 1.0E-37 T 22-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase SRM_RS13135 d276d405eccc40ec2a8f246f8c874a1a 130 PANTHER PTHR36113:SF1 3 130 1.2E-46 T 22-04-2016 SRM_RS13135 d276d405eccc40ec2a8f246f8c874a1a 130 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 4 128 2.2E-15 T 22-04-2016 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain SRM_RS13135 d276d405eccc40ec2a8f246f8c874a1a 130 PANTHER PTHR36113 3 130 1.2E-46 T 22-04-2016 SRM_RS01815 d70825b99866bd36b0b24567e8e83049 152 TIGRFAM TIGR02293 TAS_TIGR02293: putative toxin-antitoxin system antitoxin component, TIGR02293 family 23 152 3.9E-29 T 22-04-2016 IPR011979 Conserved hypothetical protein CHP02293 SRM_RS01815 d70825b99866bd36b0b24567e8e83049 152 Pfam PF09722 Protein of unknown function (DUF2384) 102 149 6.7E-16 T 22-04-2016 IPR024467 Domain of unknown function DUF2384 SRM_RS08390 b3f7a55f788fd8ad405722008d746d84 225 SUPERFAMILY SSF69593 3 127 7.06E-7 T 22-04-2016 SRM_RS08390 b3f7a55f788fd8ad405722008d746d84 225 SMART SM00563 38 150 0.0061 T 22-04-2016 IPR002123 Phospholipid/glycerol acyltransferase GO:0008152|GO:0016746 SRM_RS11425 733942ee8d5b4882873a659b86dbf106 283 Gene3D G3DSA:3.40.50.720 11 231 1.9E-19 T 22-04-2016 IPR016040 NAD(P)-binding domain SRM_RS11425 733942ee8d5b4882873a659b86dbf106 283 Pfam PF13460 NAD(P)H-binding 12 188 1.3E-7 T 22-04-2016 IPR016040 NAD(P)-binding domain SRM_RS11425 733942ee8d5b4882873a659b86dbf106 283 PANTHER PTHR10366:SF289 5 249 8.3E-26 T 22-04-2016 SRM_RS11425 733942ee8d5b4882873a659b86dbf106 283 SUPERFAMILY SSF51735 10 275 3.1E-26 T 22-04-2016 IPR016040 NAD(P)-binding domain SRM_RS11425 733942ee8d5b4882873a659b86dbf106 283 PANTHER PTHR10366 5 249 8.3E-26 T 22-04-2016 SRM_RS02570 80ff7ab660d13945893536cecc13876b 254 PANTHER PTHR30269:SF14 1 253 1.9E-44 T 22-04-2016 SRM_RS02570 80ff7ab660d13945893536cecc13876b 254 PANTHER PTHR30269 1 253 1.9E-44 T 22-04-2016 IPR002781 Transmembrane protein TauE-like GO:0016021 SRM_RS02570 80ff7ab660d13945893536cecc13876b 254 Pfam PF01925 Sulfite exporter TauE/SafE 6 243 3.4E-46 T 22-04-2016 IPR002781 Transmembrane protein TauE-like GO:0016021 SRM_RS03010 ad1c8538240d380441448238f54670a5 294 SUPERFAMILY SSF55831 1 294 2.09E-105 T 22-04-2016 IPR023451 Thymidylate synthase/dCMP hydroxymethylase domain KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|UniPathway: UPA00575 SRM_RS03010 ad1c8538240d380441448238f54670a5 294 Pfam PF00303 Thymidylate synthase 3 294 1.4E-104 T 22-04-2016 IPR023451 Thymidylate synthase/dCMP hydroxymethylase domain KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|UniPathway: UPA00575 SRM_RS03010 ad1c8538240d380441448238f54670a5 294 PANTHER PTHR11548 1 88 4.0E-122 T 22-04-2016 SRM_RS03010 ad1c8538240d380441448238f54670a5 294 PANTHER PTHR11548 116 294 4.0E-122 T 22-04-2016 SRM_RS03010 ad1c8538240d380441448238f54670a5 294 PRINTS PR00108 Thymidylate synthase family signature 168 183 1.0E-37 T 22-04-2016 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|UniPathway: UPA00575 SRM_RS03010 ad1c8538240d380441448238f54670a5 294 PRINTS PR00108 Thymidylate synthase family signature 190 216 1.0E-37 T 22-04-2016 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|UniPathway: UPA00575 SRM_RS03010 ad1c8538240d380441448238f54670a5 294 PRINTS PR00108 Thymidylate synthase family signature 42 63 1.0E-37 T 22-04-2016 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|UniPathway: UPA00575 SRM_RS03010 ad1c8538240d380441448238f54670a5 294 PRINTS PR00108 Thymidylate synthase family signature 142 161 1.0E-37 T 22-04-2016 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|UniPathway: UPA00575 SRM_RS03010 ad1c8538240d380441448238f54670a5 294 PRINTS PR00108 Thymidylate synthase family signature 228 245 1.0E-37 T 22-04-2016 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|UniPathway: UPA00575 SRM_RS03010 ad1c8538240d380441448238f54670a5 294 TIGRFAM TIGR03284 thym_sym: thymidylate synthase 2 294 1.0E-108 T 22-04-2016 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|UniPathway: UPA00575 SRM_RS03010 ad1c8538240d380441448238f54670a5 294 Hamap MF_00008 Thymidylate synthase [thyA]. 1 294 40.685 T 22-04-2016 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|UniPathway: UPA00575 SRM_RS03010 ad1c8538240d380441448238f54670a5 294 Gene3D G3DSA:3.30.572.10 1 294 2.1E-110 T 22-04-2016 IPR023451 Thymidylate synthase/dCMP hydroxymethylase domain KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|UniPathway: UPA00575 SRM_RS14715 230b97c6219ca3877dc94fdd74ec0005 164 SMART SM00953 18 144 2.9E-27 T 22-04-2016 IPR014914 RES domain SRM_RS14715 230b97c6219ca3877dc94fdd74ec0005 164 Pfam PF08808 RES domain 6 151 2.6E-21 T 22-04-2016 IPR014914 RES domain SRM_RS04885 7ce78d1665de33ab6ab3a07fdba6ea73 148 Pfam PF08308 PEGA domain 37 98 1.1E-12 T 22-04-2016 IPR013229 PEGA SRM_RS02765 0ae0abe9e8ad1ccb8591daab7c3ea25d 450 PANTHER PTHR35532 119 242 2.2E-36 T 22-04-2016 SRM_RS02765 0ae0abe9e8ad1ccb8591daab7c3ea25d 450 Pfam PF06452 Carbohydrate family 9 binding domain-like 133 287 1.6E-14 T 22-04-2016 IPR010502 Carbohydrate-binding domain, family 9 GO:0004553|GO:0016052|GO:0030246 MetaCyc: PWY-6784 SRM_RS02765 0ae0abe9e8ad1ccb8591daab7c3ea25d 450 Gene3D G3DSA:2.60.40.1190 123 355 3.9E-55 T 22-04-2016 IPR010502 Carbohydrate-binding domain, family 9 GO:0004553|GO:0016052|GO:0030246 MetaCyc: PWY-6784 SRM_RS02765 0ae0abe9e8ad1ccb8591daab7c3ea25d 450 SUPERFAMILY SSF49344 122 354 1.33E-45 T 22-04-2016 SRM_RS02765 0ae0abe9e8ad1ccb8591daab7c3ea25d 450 ProDom PD004647 DEGRADATION HYDROLASE GLYCOSIDASE XYLAN A XYLANASE PRECURSOR SIGNAL REPEAT 14- 132 284 4.0E-4 T 22-04-2016 SRM_RS02765 0ae0abe9e8ad1ccb8591daab7c3ea25d 450 PANTHER PTHR35532:SF1 119 242 2.2E-36 T 22-04-2016 SRM_RS10860 5530123c3f0f19ebf646e966b01657ee 371 Pfam PF01609 Transposase DDE domain 138 305 2.3E-15 T 22-04-2016 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 SRM_RS10860 5530123c3f0f19ebf646e966b01657ee 371 Gene3D G3DSA:3.90.350.10 258 286 1.1E-5 T 22-04-2016 IPR014736 Transposase, Tn5-like, core SRM_RS10860 5530123c3f0f19ebf646e966b01657ee 371 SUPERFAMILY SSF53098 23 311 3.87E-26 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 SRM_RS06920 8f831513a1197ece0351b58cb1e6821c 114 SUPERFAMILY SSF54862 1 83 2.43E-23 T 22-04-2016 SRM_RS06920 8f831513a1197ece0351b58cb1e6821c 114 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 40 51 - T 22-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site SRM_RS06920 8f831513a1197ece0351b58cb1e6821c 114 Pfam PF00037 4Fe-4S binding domain 35 56 1.5E-7 T 22-04-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain SRM_RS06920 8f831513a1197ece0351b58cb1e6821c 114 PRINTS PR00354 7Fe ferredoxin signature 35 52 3.1E-17 T 22-04-2016 IPR000813 7Fe ferredoxin GO:0009055 SRM_RS06920 8f831513a1197ece0351b58cb1e6821c 114 PRINTS PR00354 7Fe ferredoxin signature 9 19 3.1E-17 T 22-04-2016 IPR000813 7Fe ferredoxin GO:0009055 SRM_RS06920 8f831513a1197ece0351b58cb1e6821c 114 PRINTS PR00354 7Fe ferredoxin signature 19 29 3.1E-17 T 22-04-2016 IPR000813 7Fe ferredoxin GO:0009055 SRM_RS06920 8f831513a1197ece0351b58cb1e6821c 114 PANTHER PTHR11938 1 114 2.3E-30 T 22-04-2016 SRM_RS06920 8f831513a1197ece0351b58cb1e6821c 114 Gene3D G3DSA:3.30.70.20 3 83 9.9E-21 T 22-04-2016 SRM_RS06920 8f831513a1197ece0351b58cb1e6821c 114 Pfam PF11953 Domain of unknown function (DUF3470) 66 109 1.8E-14 T 22-04-2016 IPR022569 Ferredoxin, C-terminal SRM_RS06920 8f831513a1197ece0351b58cb1e6821c 114 PANTHER PTHR11938:SF101 1 114 2.3E-30 T 22-04-2016 SRM_RS13775 4931891fe43564bea880b7d759bcae28 420 Gene3D G3DSA:2.120.10.10 51 191 9.0E-5 T 22-04-2016 IPR011040 Sialidases SRM_RS13775 4931891fe43564bea880b7d759bcae28 420 Gene3D G3DSA:2.120.10.10 227 331 4.6E-4 T 22-04-2016 IPR011040 Sialidases SRM_RS13775 4931891fe43564bea880b7d759bcae28 420 SUPERFAMILY SSF50939 68 193 2.33E-7 T 22-04-2016 IPR011040 Sialidases SRM_RS13775 4931891fe43564bea880b7d759bcae28 420 SUPERFAMILY SSF50939 252 348 2.33E-7 T 22-04-2016 IPR011040 Sialidases SRM_RS12135 5548459b37cb0283b8e00a89ea6d685c 166 PANTHER PTHR34183:SF2 43 139 3.9E-39 T 22-04-2016 SRM_RS12135 5548459b37cb0283b8e00a89ea6d685c 166 TIGRFAM TIGR00413 rlpA: rare lipoprotein A 46 142 2.7E-39 T 22-04-2016 IPR012997 Rare lipoprotein A SRM_RS12135 5548459b37cb0283b8e00a89ea6d685c 166 PANTHER PTHR34183 43 139 3.9E-39 T 22-04-2016 SRM_RS12135 5548459b37cb0283b8e00a89ea6d685c 166 SUPERFAMILY SSF50685 47 138 1.46E-9 T 22-04-2016 IPR009009 RlpA-like protein, double-psi beta-barrel domain SRM_RS12135 5548459b37cb0283b8e00a89ea6d685c 166 Pfam PF03330 Lytic transglycolase 44 134 3.0E-24 T 22-04-2016 IPR009009 RlpA-like protein, double-psi beta-barrel domain SRM_RS01485 a2a059de1d25910c22a8e7cff49dc4de 567 Pfam PF07452 CHRD domain 341 563 1.0E-7 T 22-04-2016 IPR010895 CHRD SRM_RS13770 c2f633c9e5a0d918df9b482915823a0d 297 Gene3D G3DSA:2.40.160.20 129 261 3.5E-4 T 22-04-2016 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 SRM_RS13770 c2f633c9e5a0d918df9b482915823a0d 297 SUPERFAMILY SSF56925 129 265 3.14E-5 T 22-04-2016 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 SRM_RS05875 c5083b4169b87fc4ea383ac16217a48d 406 PANTHER PTHR10443 27 278 3.0E-115 T 22-04-2016 IPR008257 Renal dipeptidase family GO:0006508|GO:0016805 MetaCyc: PWY-7533 SRM_RS05875 c5083b4169b87fc4ea383ac16217a48d 406 PANTHER PTHR10443 318 403 3.0E-115 T 22-04-2016 IPR008257 Renal dipeptidase family GO:0006508|GO:0016805 MetaCyc: PWY-7533 SRM_RS05875 c5083b4169b87fc4ea383ac16217a48d 406 Pfam PF01244 Membrane dipeptidase (Peptidase family M19) 39 396 2.0E-96 T 22-04-2016 IPR008257 Renal dipeptidase family GO:0006508|GO:0016805 MetaCyc: PWY-7533 SRM_RS05875 c5083b4169b87fc4ea383ac16217a48d 406 Gene3D G3DSA:3.20.20.140 31 403 2.8E-122 T 22-04-2016 SRM_RS05875 c5083b4169b87fc4ea383ac16217a48d 406 SUPERFAMILY SSF51556 33 278 1.26E-92 T 22-04-2016 IPR032466 Metal-dependent hydrolase SRM_RS05875 c5083b4169b87fc4ea383ac16217a48d 406 SUPERFAMILY SSF51556 318 401 1.26E-92 T 22-04-2016 IPR032466 Metal-dependent hydrolase SRM_RS04070 b21d8aff3cb4000613a59c9b3da907ea 109 Pfam PF01934 Protein of unknown function DUF86 6 99 1.1E-23 T 22-04-2016 IPR008201 Protein of unknown function DUF86 SRM_RS04070 b21d8aff3cb4000613a59c9b3da907ea 109 Gene3D G3DSA:1.20.120.580 61 102 2.0E-6 T 22-04-2016 SRM_RS04070 b21d8aff3cb4000613a59c9b3da907ea 109 PANTHER PTHR34139 3 108 3.3E-32 T 22-04-2016 SRM_RS09750 db197f2d1dac0ce0de6188b8764579c4 307 Gene3D G3DSA:3.40.50.720 49 257 7.3E-30 T 22-04-2016 IPR016040 NAD(P)-binding domain SRM_RS09750 db197f2d1dac0ce0de6188b8764579c4 307 PANTHER PTHR12126:SF1 49 267 7.6E-47 T 22-04-2016 SRM_RS09750 db197f2d1dac0ce0de6188b8764579c4 307 PANTHER PTHR12126 49 267 7.6E-47 T 22-04-2016 SRM_RS09750 db197f2d1dac0ce0de6188b8764579c4 307 Pfam PF01370 NAD dependent epimerase/dehydratase family 51 207 1.2E-11 T 22-04-2016 IPR001509 NAD-dependent epimerase/dehydratase, N-terminal domain GO:0003824|GO:0050662 SRM_RS09750 db197f2d1dac0ce0de6188b8764579c4 307 SUPERFAMILY SSF51735 49 256 5.48E-31 T 22-04-2016 IPR016040 NAD(P)-binding domain SRM_RS06295 a3e69b6145fcf3e015bf459f7e26ec7c 296 Gene3D G3DSA:3.90.550.10 1 188 9.3E-43 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases SRM_RS06295 a3e69b6145fcf3e015bf459f7e26ec7c 296 SUPERFAMILY SSF53448 1 227 1.25E-46 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases SRM_RS06295 a3e69b6145fcf3e015bf459f7e26ec7c 296 PANTHER PTHR22916 1 188 1.2E-41 T 22-04-2016 SRM_RS06295 a3e69b6145fcf3e015bf459f7e26ec7c 296 Pfam PF00535 Glycosyl transferase family 2 4 167 7.2E-28 T 22-04-2016 IPR001173 Glycosyltransferase 2-like SRM_RS12375 28a03c526934aade8e37599e2062c8fc 250 Pfam PF01578 Cytochrome C assembly protein 23 174 6.1E-16 T 22-04-2016 IPR002541 Cytochrome c assembly protein GO:0017004|GO:0020037 SRM_RS12375 28a03c526934aade8e37599e2062c8fc 250 PANTHER PTHR30071 22 225 2.0E-24 T 22-04-2016 SRM_RS13945 593b9490b3fcb0052d4b7556a6e04ff7 310 Pfam PF02470 MlaD protein 35 113 2.9E-18 T 22-04-2016 IPR003399 Mce/MlaD SRM_RS13945 593b9490b3fcb0052d4b7556a6e04ff7 310 PANTHER PTHR33371:SF4 1 304 1.2E-26 T 22-04-2016 SRM_RS13945 593b9490b3fcb0052d4b7556a6e04ff7 310 PANTHER PTHR33371 1 304 1.2E-26 T 22-04-2016 SRM_RS03365 a3b6b5c298a1aa65fa1b26cb8061cdd6 281 Gene3D G3DSA:3.60.15.10 20 275 1.6E-71 T 22-04-2016 IPR001279 Metallo-beta-lactamase SRM_RS03365 a3b6b5c298a1aa65fa1b26cb8061cdd6 281 PANTHER PTHR12553 20 275 4.0E-64 T 22-04-2016 SRM_RS03365 a3b6b5c298a1aa65fa1b26cb8061cdd6 281 SUPERFAMILY SSF56281 20 275 1.44E-41 T 22-04-2016 IPR001279 Metallo-beta-lactamase SRM_RS03365 a3b6b5c298a1aa65fa1b26cb8061cdd6 281 Pfam PF12706 Beta-lactamase superfamily domain 63 246 1.3E-38 T 22-04-2016 IPR001279 Metallo-beta-lactamase SRM_RS03365 a3b6b5c298a1aa65fa1b26cb8061cdd6 281 PANTHER PTHR12553:SF7 20 275 4.0E-64 T 22-04-2016 SRM_RS11775 352ac7ab8a275a84157e894f44acbc14 195 Pfam PF01467 Cytidylyltransferase-like 5 166 1.6E-31 T 22-04-2016 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 SRM_RS11775 352ac7ab8a275a84157e894f44acbc14 195 Hamap MF_00244 Probable nicotinate-nucleotide adenylyltransferase [nadD]. 1 192 31.338 T 22-04-2016 IPR005248 Probable nicotinate-nucleotide adenylyltransferase GO:0009435|GO:0016779 KEGG: 00760+2.7.7.18|MetaCyc: PWY-5381|MetaCyc: PWY-5653|Reactome: REACT_11193|UniPathway: UPA00253 SRM_RS11775 352ac7ab8a275a84157e894f44acbc14 195 SUPERFAMILY SSF52374 3 193 1.06E-50 T 22-04-2016 SRM_RS11775 352ac7ab8a275a84157e894f44acbc14 195 Gene3D G3DSA:3.40.50.620 1 193 1.0E-61 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold SRM_RS11775 352ac7ab8a275a84157e894f44acbc14 195 TIGRFAM TIGR00482 TIGR00482: nicotinate (nicotinamide) nucleotide adenylyltransferase 5 191 7.4E-57 T 22-04-2016 IPR005248 Probable nicotinate-nucleotide adenylyltransferase GO:0009435|GO:0016779 KEGG: 00760+2.7.7.18|MetaCyc: PWY-5381|MetaCyc: PWY-5653|Reactome: REACT_11193|UniPathway: UPA00253 SRM_RS11775 352ac7ab8a275a84157e894f44acbc14 195 TIGRFAM TIGR00125 cyt_tran_rel: cytidyltransferase-like domain 3 67 1.2E-7 T 22-04-2016 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 SRM_RS12590 d143e45790edaa4ba7fd1124e3863509 319 PANTHER PTHR30616 88 319 1.9E-80 T 22-04-2016 SRM_RS12590 d143e45790edaa4ba7fd1124e3863509 319 SUPERFAMILY SSF64438 83 317 3.3E-75 T 22-04-2016 IPR011324 Cytotoxic necrotizing factor-like, catalytic SRM_RS12590 d143e45790edaa4ba7fd1124e3863509 319 Gene3D G3DSA:3.60.140.10 81 318 1.8E-80 T 22-04-2016 IPR003730 Multi-copper polyphenol oxidoreductase, laccase SRM_RS12590 d143e45790edaa4ba7fd1124e3863509 319 TIGRFAM TIGR00726 TIGR00726: YfiH family protein 98 317 2.7E-49 T 22-04-2016 IPR003730 Multi-copper polyphenol oxidoreductase, laccase SRM_RS12590 d143e45790edaa4ba7fd1124e3863509 319 Pfam PF02578 Multi-copper polyphenol oxidoreductase laccase 93 314 2.5E-74 T 22-04-2016 IPR003730 Multi-copper polyphenol oxidoreductase, laccase SRM_RS07550 3aaa6f9adad25b1a620cb0fda0683fed 1726 PANTHER PTHR36985 991 1725 1.6E-22 T 22-04-2016 SRM_RS07550 3aaa6f9adad25b1a620cb0fda0683fed 1726 Pfam PF04357 TamB, inner membrane protein subunit of TAM complex 1353 1726 2.0E-77 T 22-04-2016 IPR007452 Translocation and assembly module TamB SRM_RS15145 9b20d2b1421553845f4775444804d1e1 316 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 8 265 3.7E-28 T 22-04-2016 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain SRM_RS15145 9b20d2b1421553845f4775444804d1e1 316 SUPERFAMILY SSF54593 4 289 2.0E-48 T 22-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase SRM_RS15145 9b20d2b1421553845f4775444804d1e1 316 Gene3D G3DSA:3.10.180.10 5 134 3.1E-34 T 22-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase SRM_RS15145 9b20d2b1421553845f4775444804d1e1 316 Gene3D G3DSA:3.10.180.10 139 314 8.8E-39 T 22-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase SRM_RS15145 9b20d2b1421553845f4775444804d1e1 316 PANTHER PTHR36110:SF2 4 313 9.5E-117 T 22-04-2016 SRM_RS15145 9b20d2b1421553845f4775444804d1e1 316 PANTHER PTHR36110 4 313 9.5E-117 T 22-04-2016 SRM_RS03875 cfbaa4d8a3ff15d7e97814853f84a528 137 Pfam PF01934 Protein of unknown function DUF86 16 128 7.4E-26 T 22-04-2016 IPR008201 Protein of unknown function DUF86 SRM_RS03875 cfbaa4d8a3ff15d7e97814853f84a528 137 Gene3D G3DSA:1.20.120.580 1 137 1.4E-30 T 22-04-2016 SRM_RS14950 d47e20cbe35ccded238c3c4634491c70 180 SUPERFAMILY SSF46785 17 145 3.01E-34 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SRM_RS14950 d47e20cbe35ccded238c3c4634491c70 180 Pfam PF01475 Ferric uptake regulator family 24 142 2.3E-31 T 22-04-2016 IPR002481 Ferric-uptake regulator GO:0003700|GO:0006355 SRM_RS14950 d47e20cbe35ccded238c3c4634491c70 180 Gene3D G3DSA:1.10.10.10 16 92 2.9E-22 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SRM_RS15070 9fd080d1d3aa59ef1d7feedf3b2cefcd 391 Pfam PF01497 Periplasmic binding protein 125 353 9.0E-41 T 22-04-2016 IPR002491 ABC transporter periplasmic binding domain GO:0005488 SRM_RS15070 9fd080d1d3aa59ef1d7feedf3b2cefcd 391 Gene3D G3DSA:3.40.50.1980 123 242 4.0E-28 T 22-04-2016 SRM_RS15070 9fd080d1d3aa59ef1d7feedf3b2cefcd 391 Gene3D G3DSA:3.40.50.1980 250 377 6.9E-20 T 22-04-2016 SRM_RS15070 9fd080d1d3aa59ef1d7feedf3b2cefcd 391 PANTHER PTHR30535:SF4 123 380 8.7E-93 T 22-04-2016 SRM_RS15070 9fd080d1d3aa59ef1d7feedf3b2cefcd 391 PANTHER PTHR30535 123 380 8.7E-93 T 22-04-2016 SRM_RS15070 9fd080d1d3aa59ef1d7feedf3b2cefcd 391 SUPERFAMILY SSF53807 119 375 1.45E-55 T 22-04-2016 SRM_RS11520 b957496397b5ecc6ef4e0f9980de50ed 994 Gene3D G3DSA:2.60.40.1120 33 123 3.4E-21 T 22-04-2016 IPR014766 Carboxypeptidase, regulatory domain SRM_RS11520 b957496397b5ecc6ef4e0f9980de50ed 994 Pfam PF07715 TonB-dependent Receptor Plug Domain 135 237 4.1E-14 T 22-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 SRM_RS11520 b957496397b5ecc6ef4e0f9980de50ed 994 SUPERFAMILY SSF56935 642 992 2.97E-91 T 22-04-2016 SRM_RS11520 b957496397b5ecc6ef4e0f9980de50ed 994 SUPERFAMILY SSF56935 350 481 2.97E-91 T 22-04-2016 SRM_RS11520 b957496397b5ecc6ef4e0f9980de50ed 994 SUPERFAMILY SSF56935 111 314 2.97E-91 T 22-04-2016 SRM_RS11520 b957496397b5ecc6ef4e0f9980de50ed 994 SUPERFAMILY SSF56935 509 572 2.97E-91 T 22-04-2016 SRM_RS11520 b957496397b5ecc6ef4e0f9980de50ed 994 PANTHER PTHR40980:SF3 665 973 2.8E-34 T 22-04-2016 SRM_RS11520 b957496397b5ecc6ef4e0f9980de50ed 994 Pfam PF13715 CarboxypepD_reg-like domain 33 120 1.7E-24 T 22-04-2016 SRM_RS11520 b957496397b5ecc6ef4e0f9980de50ed 994 TIGRFAM TIGR01782 TonB-Xanth-Caul: TonB-dependent receptor 117 992 7.8E-175 T 22-04-2016 IPR010104 Bacterial TonB-dependent receptor SRM_RS11520 b957496397b5ecc6ef4e0f9980de50ed 994 Gene3D G3DSA:2.170.130.10 124 237 3.3E-16 T 22-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 SRM_RS11520 b957496397b5ecc6ef4e0f9980de50ed 994 SUPERFAMILY SSF49464 31 117 2.94E-20 T 22-04-2016 IPR008969 Carboxypeptidase-like, regulatory domain SRM_RS11520 b957496397b5ecc6ef4e0f9980de50ed 994 PANTHER PTHR40980 665 973 2.8E-34 T 22-04-2016 SRM_RS11520 b957496397b5ecc6ef4e0f9980de50ed 994 Gene3D G3DSA:2.40.170.20 238 310 4.3E-70 T 22-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 SRM_RS11520 b957496397b5ecc6ef4e0f9980de50ed 994 Gene3D G3DSA:2.40.170.20 509 591 4.3E-70 T 22-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 SRM_RS11520 b957496397b5ecc6ef4e0f9980de50ed 994 Gene3D G3DSA:2.40.170.20 656 993 4.3E-70 T 22-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 SRM_RS11520 b957496397b5ecc6ef4e0f9980de50ed 994 Gene3D G3DSA:2.40.170.20 346 464 4.3E-70 T 22-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 SRM_RS11520 b957496397b5ecc6ef4e0f9980de50ed 994 Pfam PF14905 Outer membrane protein beta-barrel family 654 965 1.3E-27 T 22-04-2016 SRM_RS05745 12872e300ec20a7c73ed046cf86997e6 608 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 409 427 2.6E-66 T 22-04-2016 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 SRM_RS05745 12872e300ec20a7c73ed046cf86997e6 608 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 160 178 2.6E-66 T 22-04-2016 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 SRM_RS05745 12872e300ec20a7c73ed046cf86997e6 608 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 499 516 2.6E-66 T 22-04-2016 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 SRM_RS05745 12872e300ec20a7c73ed046cf86997e6 608 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 278 294 2.6E-66 T 22-04-2016 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 SRM_RS05745 12872e300ec20a7c73ed046cf86997e6 608 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 87 112 2.6E-66 T 22-04-2016 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 SRM_RS05745 12872e300ec20a7c73ed046cf86997e6 608 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 178 197 2.6E-66 T 22-04-2016 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 SRM_RS05745 12872e300ec20a7c73ed046cf86997e6 608 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 308 327 2.6E-66 T 22-04-2016 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 SRM_RS05745 12872e300ec20a7c73ed046cf86997e6 608 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 474 489 2.6E-66 T 22-04-2016 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 SRM_RS05745 12872e300ec20a7c73ed046cf86997e6 608 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 433 451 2.6E-66 T 22-04-2016 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 SRM_RS05745 12872e300ec20a7c73ed046cf86997e6 608 TIGRFAM TIGR00066 g_glut_trans: gamma-glutamyltransferase 65 600 1.1E-155 T 22-04-2016 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 SRM_RS05745 12872e300ec20a7c73ed046cf86997e6 608 SUPERFAMILY SSF56235 60 608 5.21E-170 T 22-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal SRM_RS05745 12872e300ec20a7c73ed046cf86997e6 608 Pfam PF01019 Gamma-glutamyltranspeptidase 80 603 5.6E-159 T 22-04-2016 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 SRM_RS03545 4f06331e3b7fcddc25f1b69b76b5153c 274 PANTHER PTHR30283 6 262 5.3E-13 T 22-04-2016 SRM_RS03545 4f06331e3b7fcddc25f1b69b76b5153c 274 Pfam PF03883 Protein of unknown function (DUF328) 5 246 4.4E-34 T 22-04-2016 IPR005583 Peroxide stress protein YaaA SRM_RS03545 4f06331e3b7fcddc25f1b69b76b5153c 274 PANTHER PTHR30283:SF3 6 262 5.3E-13 T 22-04-2016 SRM_RS15005 c843544d092251954c4311294f673ac9 256 SUPERFAMILY SSF53187 13 248 1.55E-36 T 22-04-2016 SRM_RS15005 c843544d092251954c4311294f673ac9 256 Gene3D G3DSA:3.40.630.10 8 145 3.7E-8 T 22-04-2016 SRM_RS15005 c843544d092251954c4311294f673ac9 256 Pfam PF04952 Succinylglutamate desuccinylase / Aspartoacylase family 13 110 1.2E-13 T 22-04-2016 IPR007036 Succinylglutamate desuccinylase/aspartoacylase GO:0008152|GO:0016788 SRM_RS12295 cc43dd9854f02da4824a62a90d47bf7d 303 Pfam PF14054 Domain of unknown function (DUF4249) 20 155 6.8E-7 T 22-04-2016 IPR025345 Protein of unknown function DUF4249 SRM_RS03695 76d59fd3f53f6230c3a5be4dbe43ca48 145 PANTHER PTHR34701 3 141 9.7E-43 T 22-04-2016 SRM_RS03695 76d59fd3f53f6230c3a5be4dbe43ca48 145 Hamap MF_01008 Transcriptional regulator MraZ [mraZ]. 1 145 45.04 T 22-04-2016 IPR003444 Transcriptional regulator MraZ GO:0003700|GO:0006355 SRM_RS03695 76d59fd3f53f6230c3a5be4dbe43ca48 145 ProDom PD006745 MRAZ YABB DIVISION CELL 3D-STRUCTURE UNCHARACTERIZED BCR SIMILAR PROTEIN 3 143 3.0E-26 T 22-04-2016 IPR003444 Transcriptional regulator MraZ GO:0003700|GO:0006355 SRM_RS03695 76d59fd3f53f6230c3a5be4dbe43ca48 145 Gene3D G3DSA:2.10.260.10 11 28 7.7E-4 T 22-04-2016 SRM_RS03695 76d59fd3f53f6230c3a5be4dbe43ca48 145 TIGRFAM TIGR00242 TIGR00242: division/cell wall cluster transcriptional repressor MraZ 3 142 8.6E-40 T 22-04-2016 IPR003444 Transcriptional regulator MraZ GO:0003700|GO:0006355 SRM_RS03695 76d59fd3f53f6230c3a5be4dbe43ca48 145 SUPERFAMILY SSF89447 2 141 1.07E-43 T 22-04-2016 SRM_RS03695 76d59fd3f53f6230c3a5be4dbe43ca48 145 Pfam PF02381 MraZ protein, putative antitoxin-like 79 132 1.3E-13 T 22-04-2016 IPR020603 MraZ domain SRM_RS03695 76d59fd3f53f6230c3a5be4dbe43ca48 145 Pfam PF02381 MraZ protein, putative antitoxin-like 3 75 6.2E-15 T 22-04-2016 IPR020603 MraZ domain SRM_RS15635 415622627acb9530d0827b76c9be1f44 197 Gene3D G3DSA:1.25.40.10 119 190 2.3E-4 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 SRM_RS12710 30e7a37eb93c266826f767ba66149b75 486 SMART SM00839 200 483 1.3E-86 T 22-04-2016 IPR006096 Glutamate/phenylalanine/leucine/valine dehydrogenase, C-terminal GO:0006520|GO:0016491|GO:0055114 SRM_RS12710 30e7a37eb93c266826f767ba66149b75 486 SUPERFAMILY SSF53223 19 200 4.8E-60 T 22-04-2016 SRM_RS12710 30e7a37eb93c266826f767ba66149b75 486 Gene3D G3DSA:3.40.192.10 51 195 9.6E-59 T 22-04-2016 SRM_RS12710 30e7a37eb93c266826f767ba66149b75 486 SUPERFAMILY SSF51735 202 485 1.45E-64 T 22-04-2016 IPR016040 NAD(P)-binding domain SRM_RS12710 30e7a37eb93c266826f767ba66149b75 486 PANTHER PTHR11606 39 484 2.1E-218 T 22-04-2016 SRM_RS12710 30e7a37eb93c266826f767ba66149b75 486 PRINTS PR00082 Glutamate/leucine/phenylalanine/valine dehydrogenase signature 367 378 3.4E-32 T 22-04-2016 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase GO:0006520|GO:0016491|GO:0055114 SRM_RS12710 30e7a37eb93c266826f767ba66149b75 486 PRINTS PR00082 Glutamate/leucine/phenylalanine/valine dehydrogenase signature 189 211 3.4E-32 T 22-04-2016 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase GO:0006520|GO:0016491|GO:0055114 SRM_RS12710 30e7a37eb93c266826f767ba66149b75 486 PRINTS PR00082 Glutamate/leucine/phenylalanine/valine dehydrogenase signature 239 259 3.4E-32 T 22-04-2016 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase GO:0006520|GO:0016491|GO:0055114 SRM_RS12710 30e7a37eb93c266826f767ba66149b75 486 PRINTS PR00082 Glutamate/leucine/phenylalanine/valine dehydrogenase signature 105 119 3.4E-32 T 22-04-2016 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase GO:0006520|GO:0016491|GO:0055114 SRM_RS12710 30e7a37eb93c266826f767ba66149b75 486 PIRSF PIRSF000185 15 486 3.3E-146 T 22-04-2016 IPR014362 Glutamate dehydrogenase GO:0016639|GO:0055114 SRM_RS12710 30e7a37eb93c266826f767ba66149b75 486 Gene3D G3DSA:3.40.50.720 198 485 8.5E-92 T 22-04-2016 IPR016040 NAD(P)-binding domain SRM_RS12710 30e7a37eb93c266826f767ba66149b75 486 PANTHER PTHR11606:SF13 39 484 2.1E-218 T 22-04-2016 SRM_RS12710 30e7a37eb93c266826f767ba66149b75 486 Pfam PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain 50 177 1.1E-56 T 22-04-2016 IPR006097 Glutamate/phenylalanine/leucine/valine dehydrogenase, dimerisation domain GO:0006520|GO:0016491|GO:0055114 SRM_RS12710 30e7a37eb93c266826f767ba66149b75 486 Pfam PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase 198 408 8.8E-53 T 22-04-2016 IPR006096 Glutamate/phenylalanine/leucine/valine dehydrogenase, C-terminal GO:0006520|GO:0016491|GO:0055114 SRM_RS02485 a72b106de0e27dc8a14f2689abf37d01 159 SUPERFAMILY SSF51206 11 130 1.31E-28 T 22-04-2016 IPR018490 Cyclic nucleotide-binding-like SRM_RS02485 a72b106de0e27dc8a14f2689abf37d01 159 Gene3D G3DSA:2.60.120.10 13 130 1.8E-27 T 22-04-2016 IPR014710 RmlC-like jelly roll fold SRM_RS02485 a72b106de0e27dc8a14f2689abf37d01 159 SMART SM00100 17 138 2.2E-15 T 22-04-2016 IPR000595 Cyclic nucleotide-binding domain SRM_RS02485 a72b106de0e27dc8a14f2689abf37d01 159 PANTHER PTHR24567 6 132 1.6E-20 T 22-04-2016 SRM_RS02485 a72b106de0e27dc8a14f2689abf37d01 159 PANTHER PTHR24567:SF30 6 132 1.6E-20 T 22-04-2016 SRM_RS02485 a72b106de0e27dc8a14f2689abf37d01 159 Pfam PF00027 Cyclic nucleotide-binding domain 37 125 6.7E-19 T 22-04-2016 IPR000595 Cyclic nucleotide-binding domain SRM_RS07645 283e27b6822fd72636a6052914c3d00c 266 Gene3D G3DSA:3.20.20.150 13 254 4.1E-35 T 22-04-2016 IPR013022 Xylose isomerase-like, TIM barrel domain SRM_RS07645 283e27b6822fd72636a6052914c3d00c 266 Pfam PF01261 Xylose isomerase-like TIM barrel 25 213 7.9E-21 T 22-04-2016 IPR013022 Xylose isomerase-like, TIM barrel domain SRM_RS07645 283e27b6822fd72636a6052914c3d00c 266 PANTHER PTHR12110 13 237 1.9E-23 T 22-04-2016 SRM_RS07645 283e27b6822fd72636a6052914c3d00c 266 SUPERFAMILY SSF51658 13 262 2.76E-35 T 22-04-2016 IPR013022 Xylose isomerase-like, TIM barrel domain SRM_RS01785 44a7e29d72b669a7ae9fd3a61430c429 399 TIGRFAM TIGR01766 tspaseT_teng_C: transposase, IS605 OrfB family 237 316 3.9E-21 T 22-04-2016 IPR010095 Transposase IS605, OrfB, C-terminal SRM_RS01785 44a7e29d72b669a7ae9fd3a61430c429 399 Pfam PF01385 Probable transposase 158 269 2.8E-14 T 22-04-2016 IPR001959 Probable transposase, IS891/IS1136/IS1341 SRM_RS01785 44a7e29d72b669a7ae9fd3a61430c429 399 Pfam PF07282 Putative transposase DNA-binding domain 289 355 2.4E-25 T 22-04-2016 IPR010095 Transposase IS605, OrfB, C-terminal SRM_RS01785 44a7e29d72b669a7ae9fd3a61430c429 399 PANTHER PTHR30405 1 361 9.8E-65 T 22-04-2016 SRM_RS04480 a92fe08b7e742aa8604242e4b5805780 418 PANTHER PTHR10120 2 413 6.4E-128 T 22-04-2016 SRM_RS04480 a92fe08b7e742aa8604242e4b5805780 418 PANTHER PTHR10120:SF24 2 413 6.4E-128 T 22-04-2016 IPR027057 CAAX prenyl protease 1 GO:0008233|GO:0071586 KEGG: 00900+3.4.24.84 SRM_RS04480 a92fe08b7e742aa8604242e4b5805780 418 Pfam PF16491 CAAX prenyl protease N-terminal, five membrane helices 32 200 9.1E-50 T 22-04-2016 IPR032456 CAAX prenyl protease 1, N-terminal KEGG: 00900+3.4.24.84 SRM_RS04480 a92fe08b7e742aa8604242e4b5805780 418 Pfam PF01435 Peptidase family M48 204 409 1.9E-38 T 22-04-2016 IPR001915 Peptidase M48 GO:0004222|GO:0006508 SRM_RS04480 a92fe08b7e742aa8604242e4b5805780 418 Gene3D G3DSA:3.30.2010.10 198 287 1.7E-18 T 22-04-2016 SRM_RS01510 90b571cd8fb659e3feb5a3086a195fa2 347 SUPERFAMILY SSF109604 182 277 2.61E-7 T 22-04-2016 SRM_RS01510 90b571cd8fb659e3feb5a3086a195fa2 347 Gene3D G3DSA:1.10.3150.10 14 126 1.9E-23 T 22-04-2016 IPR013976 Metal-dependent hydrolase HDOD SRM_RS01510 90b571cd8fb659e3feb5a3086a195fa2 347 Gene3D G3DSA:1.10.3150.10 169 284 1.9E-23 T 22-04-2016 IPR013976 Metal-dependent hydrolase HDOD SRM_RS01510 90b571cd8fb659e3feb5a3086a195fa2 347 SUPERFAMILY SSF109604 14 127 1.48E-9 T 22-04-2016 SRM_RS01510 90b571cd8fb659e3feb5a3086a195fa2 347 Pfam PF08668 HDOD domain 182 256 3.7E-6 T 22-04-2016 IPR013976 Metal-dependent hydrolase HDOD SRM_RS08745 06b5e50040d793ea223cb3941f8ca11e 273 Pfam PF01036 Bacteriorhodopsin-like protein 21 257 5.2E-20 T 22-04-2016 IPR001425 Archaeal/bacterial/fungal rhodopsins GO:0005216|GO:0006811|GO:0016020 SRM_RS08745 06b5e50040d793ea223cb3941f8ca11e 273 SUPERFAMILY SSF81321 15 255 6.72E-51 T 22-04-2016 SRM_RS08745 06b5e50040d793ea223cb3941f8ca11e 273 PIRSF PIRSF038142 1 262 5.7E-90 T 22-04-2016 IPR017402 Proteorhodopsin GO:0006811|GO:0010461|GO:0016020 SRM_RS08745 06b5e50040d793ea223cb3941f8ca11e 273 Gene3D G3DSA:1.20.1070.10 4 265 1.1E-82 T 22-04-2016 SRM_RS08745 06b5e50040d793ea223cb3941f8ca11e 273 SMART SM01021 16 266 9.9E-74 T 22-04-2016 IPR001425 Archaeal/bacterial/fungal rhodopsins GO:0005216|GO:0006811|GO:0016020 SRM_RS08745 06b5e50040d793ea223cb3941f8ca11e 273 PRINTS PR00251 Bacterial opsin signature 91 112 2.8E-12 T 22-04-2016 IPR001425 Archaeal/bacterial/fungal rhodopsins GO:0005216|GO:0006811|GO:0016020 SRM_RS08745 06b5e50040d793ea223cb3941f8ca11e 273 PRINTS PR00251 Bacterial opsin signature 151 172 2.8E-12 T 22-04-2016 IPR001425 Archaeal/bacterial/fungal rhodopsins GO:0005216|GO:0006811|GO:0016020 SRM_RS08745 06b5e50040d793ea223cb3941f8ca11e 273 PRINTS PR00251 Bacterial opsin signature 230 248 2.8E-12 T 22-04-2016 IPR001425 Archaeal/bacterial/fungal rhodopsins GO:0005216|GO:0006811|GO:0016020 SRM_RS11250 893efd8ba94af03aacd1b23686942f53 470 PANTHER PTHR11516 142 464 6.9E-127 T 22-04-2016 SRM_RS11250 893efd8ba94af03aacd1b23686942f53 470 Gene3D G3DSA:3.40.50.970 139 464 3.4E-117 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold SRM_RS11250 893efd8ba94af03aacd1b23686942f53 470 SUPERFAMILY SSF52518 139 463 2.31E-92 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold SRM_RS11250 893efd8ba94af03aacd1b23686942f53 470 PANTHER PTHR11516:SF25 142 464 6.9E-127 T 22-04-2016 SRM_RS11250 893efd8ba94af03aacd1b23686942f53 470 Pfam PF00676 Dehydrogenase E1 component 156 451 1.5E-82 T 22-04-2016 IPR001017 Dehydrogenase, E1 component GO:0008152|GO:0016624 SRM_RS11250 893efd8ba94af03aacd1b23686942f53 470 TIGRFAM TIGR03182 PDH_E1_alph_y: pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit 148 462 1.2E-125 T 22-04-2016 IPR017597 Pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit, subgroup y GO:0004739|GO:0006086|GO:0043231 KEGG: 00010+1.2.4.1|KEGG: 00020+1.2.4.1|KEGG: 00620+1.2.4.1 SRM_RS08790 8fead7e458abdcc5c0087cde13b2e9df 306 SUPERFAMILY SSF53335 21 257 1.03E-14 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SRM_RS08790 8fead7e458abdcc5c0087cde13b2e9df 306 Pfam PF08242 Methyltransferase domain 47 167 2.2E-7 T 22-04-2016 IPR013217 Methyltransferase type 12 SRM_RS08790 8fead7e458abdcc5c0087cde13b2e9df 306 Gene3D G3DSA:3.40.50.150 33 176 9.1E-10 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SRM_RS04590 839b6bb0ff5da4bba3ebd37aca548339 99 SUPERFAMILY SSF54909 8 98 1.12E-24 T 22-04-2016 IPR011008 Dimeric alpha-beta barrel SRM_RS04590 839b6bb0ff5da4bba3ebd37aca548339 99 Gene3D G3DSA:3.30.70.900 5 95 2.3E-33 T 22-04-2016 SRM_RS13160 92fb0aafd0cbf46425acb1318cb5a1d0 280 TIGRFAM TIGR02757 TIGR02757: TIGR02757 family protein 23 256 4.3E-53 T 22-04-2016 IPR014127 Conserved hypothetical protein CHP02757 SRM_RS13160 92fb0aafd0cbf46425acb1318cb5a1d0 280 Pfam PF09674 Protein of unknown function (DUF2400) 27 256 9.6E-69 T 22-04-2016 IPR014127 Conserved hypothetical protein CHP02757 SRM_RS07485 73ed26475ed59773de708cf8d0ceeaa6 529 Pfam PF09822 ABC-type uncharacterized transport system 39 295 8.6E-69 T 22-04-2016 IPR019196 ABC-type uncharacterised transport system SRM_RS08740 573c02abdcc5a1d7c83d18d9c750ff0a 324 Gene3D G3DSA:3.40.50.300 11 179 6.0E-47 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SRM_RS08740 573c02abdcc5a1d7c83d18d9c750ff0a 324 TIGRFAM TIGR00174 miaA: tRNA dimethylallyltransferase 14 293 5.5E-88 T 22-04-2016 IPR018022 tRNA dimethylallyltransferase GO:0008033 KEGG: 00908+2.5.1.75|MetaCyc: PWY-2781 SRM_RS08740 573c02abdcc5a1d7c83d18d9c750ff0a 324 Gene3D G3DSA:1.10.287.890 206 287 5.5E-29 T 22-04-2016 SRM_RS08740 573c02abdcc5a1d7c83d18d9c750ff0a 324 Hamap MF_00185 tRNA dimethylallyltransferase [miaA]. 13 306 29.288 T 22-04-2016 IPR018022 tRNA dimethylallyltransferase GO:0008033 KEGG: 00908+2.5.1.75|MetaCyc: PWY-2781 SRM_RS08740 573c02abdcc5a1d7c83d18d9c750ff0a 324 Pfam PF01715 IPP transferase 46 290 2.0E-75 T 22-04-2016 IPR018022 tRNA dimethylallyltransferase GO:0008033 KEGG: 00908+2.5.1.75|MetaCyc: PWY-2781 SRM_RS08740 573c02abdcc5a1d7c83d18d9c750ff0a 324 SUPERFAMILY SSF52540 13 163 2.55E-21 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SRM_RS08740 573c02abdcc5a1d7c83d18d9c750ff0a 324 PANTHER PTHR11088 1 293 4.9E-97 T 22-04-2016 SRM_RS04705 99acdcdbf712192d76ce1ca26273fef0 170 PANTHER PTHR21021 11 158 9.6E-36 T 22-04-2016 SRM_RS04705 99acdcdbf712192d76ce1ca26273fef0 170 Pfam PF13185 GAF domain 41 161 2.4E-9 T 22-04-2016 IPR003018 GAF domain GO:0005515 SRM_RS04705 99acdcdbf712192d76ce1ca26273fef0 170 Gene3D G3DSA:3.30.450.40 10 161 3.8E-44 T 22-04-2016 IPR029016 GAF domain-like SRM_RS04705 99acdcdbf712192d76ce1ca26273fef0 170 SUPERFAMILY SSF55781 10 162 1.54E-35 T 22-04-2016 IPR029016 GAF domain-like SRM_RS11155 b618c34e7b4a39dafc89f326c2dae2fb 456 Gene3D G3DSA:3.40.50.1110 344 442 2.5E-6 T 22-04-2016 IPR013830 SGNH hydrolase-type esterase domain SRM_RS11155 b618c34e7b4a39dafc89f326c2dae2fb 456 Pfam PF00657 GDSL-like Lipase/Acylhydrolase 47 433 1.2E-9 T 22-04-2016 IPR001087 GDSL lipase/esterase GO:0016788 SRM_RS11155 b618c34e7b4a39dafc89f326c2dae2fb 456 Gene3D G3DSA:3.40.50.1110 131 253 6.3E-6 T 22-04-2016 IPR013830 SGNH hydrolase-type esterase domain SRM_RS11155 b618c34e7b4a39dafc89f326c2dae2fb 456 Gene3D G3DSA:3.40.50.1110 47 89 6.3E-6 T 22-04-2016 IPR013830 SGNH hydrolase-type esterase domain SRM_RS11155 b618c34e7b4a39dafc89f326c2dae2fb 456 SUPERFAMILY SSF52266 47 89 6.29E-19 T 22-04-2016 IPR013830 SGNH hydrolase-type esterase domain SRM_RS11155 b618c34e7b4a39dafc89f326c2dae2fb 456 SUPERFAMILY SSF52266 352 439 6.29E-19 T 22-04-2016 IPR013830 SGNH hydrolase-type esterase domain SRM_RS11155 b618c34e7b4a39dafc89f326c2dae2fb 456 SUPERFAMILY SSF52266 131 244 6.29E-19 T 22-04-2016 IPR013830 SGNH hydrolase-type esterase domain SRM_RS13440 8ad107a24ee701292ef72c5cc6da5e4e 390 PANTHER PTHR12526 138 373 7.1E-35 T 22-04-2016 SRM_RS13440 8ad107a24ee701292ef72c5cc6da5e4e 390 PANTHER PTHR12526 10 120 7.1E-35 T 22-04-2016 SRM_RS13440 8ad107a24ee701292ef72c5cc6da5e4e 390 Gene3D G3DSA:3.40.50.2000 191 366 3.2E-27 T 22-04-2016 SRM_RS13440 8ad107a24ee701292ef72c5cc6da5e4e 390 Pfam PF13692 Glycosyl transferases group 1 212 352 1.0E-22 T 22-04-2016 SRM_RS13440 8ad107a24ee701292ef72c5cc6da5e4e 390 Pfam PF13439 Glycosyltransferase Family 4 22 188 4.6E-11 T 22-04-2016 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain SRM_RS13440 8ad107a24ee701292ef72c5cc6da5e4e 390 SUPERFAMILY SSF53756 10 373 1.75E-57 T 22-04-2016 SRM_RS05035 d8a7cb9bcd7201be39dac61d598e0d92 142 Gene3D G3DSA:3.30.1130.10 23 136 8.4E-35 T 22-04-2016 SRM_RS05035 d8a7cb9bcd7201be39dac61d598e0d92 142 TIGRFAM TIGR00526 folB_dom: FolB domain 24 129 4.6E-23 T 22-04-2016 IPR006157 Dihydroneopterin aldolase/epimerase domain GO:0004150|GO:0006760 KEGG: 00790+4.1.2.25|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|UniPathway: UPA00077 SRM_RS05035 d8a7cb9bcd7201be39dac61d598e0d92 142 Pfam PF02152 Dihydroneopterin aldolase 25 135 2.0E-29 T 22-04-2016 IPR006157 Dihydroneopterin aldolase/epimerase domain GO:0004150|GO:0006760 KEGG: 00790+4.1.2.25|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|UniPathway: UPA00077 SRM_RS05035 d8a7cb9bcd7201be39dac61d598e0d92 142 TIGRFAM TIGR00525 folB: dihydroneopterin aldolase 24 133 5.2E-32 T 22-04-2016 IPR006156 Dihydroneopterin aldolase GO:0004150|GO:0006760 KEGG: 00790+4.1.2.25|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|UniPathway: UPA00077 SRM_RS05035 d8a7cb9bcd7201be39dac61d598e0d92 142 PANTHER PTHR20941 31 129 1.7E-16 T 22-04-2016 SRM_RS05035 d8a7cb9bcd7201be39dac61d598e0d92 142 SMART SM00905 24 137 6.1E-38 T 22-04-2016 IPR006157 Dihydroneopterin aldolase/epimerase domain GO:0004150|GO:0006760 KEGG: 00790+4.1.2.25|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|UniPathway: UPA00077 SRM_RS05035 d8a7cb9bcd7201be39dac61d598e0d92 142 SUPERFAMILY SSF55620 23 136 1.33E-32 T 22-04-2016 SRM_RS08900 1f4f4240477218ae48d22fe51e8ad714 420 PANTHER PTHR36454 1 409 1.3E-114 T 22-04-2016 SRM_RS08900 1f4f4240477218ae48d22fe51e8ad714 420 PIRSF PIRSF033563 1 408 1.0E-108 T 22-04-2016 IPR008323 Uncharacterised conserved protein UCP033563 SRM_RS08900 1f4f4240477218ae48d22fe51e8ad714 420 Pfam PF06245 Protein of unknown function (DUF1015) 4 404 1.2E-112 T 22-04-2016 IPR008323 Uncharacterised conserved protein UCP033563 SRM_RS08900 1f4f4240477218ae48d22fe51e8ad714 420 PANTHER PTHR36454:SF1 1 409 1.3E-114 T 22-04-2016 SRM_RS12790 42fdb491633ca17047a489662abf7c85 525 PANTHER PTHR16254:SF14 1 469 5.3E-56 T 22-04-2016 SRM_RS12790 42fdb491633ca17047a489662abf7c85 525 PANTHER PTHR16254 1 469 5.3E-56 T 22-04-2016 SRM_RS12790 42fdb491633ca17047a489662abf7c85 525 Gene3D G3DSA:3.40.50.720 384 492 3.7E-21 T 22-04-2016 IPR016040 NAD(P)-binding domain SRM_RS12790 42fdb491633ca17047a489662abf7c85 525 SUPERFAMILY SSF51735 384 492 2.41E-18 T 22-04-2016 IPR016040 NAD(P)-binding domain SRM_RS12790 42fdb491633ca17047a489662abf7c85 525 Pfam PF02254 TrkA-N domain 387 486 1.8E-14 T 22-04-2016 IPR003148 Regulator of K+ conductance, N-terminal GO:0006813 SRM_RS12790 42fdb491633ca17047a489662abf7c85 525 Pfam PF00999 Sodium/hydrogen exchanger family 7 358 1.2E-33 T 22-04-2016 IPR006153 Cation/H+ exchanger GO:0006812|GO:0015299|GO:0016021|GO:0055085 SRM_RS12755 c74d7d55390d66520f0854da9e41f5c1 237 Pfam PF11322 Protein of unknown function (DUF3124) 98 218 2.9E-47 T 22-04-2016 IPR021471 Protein of unknown function DUF3124 SRM_RS13980 d5664e62e65ef7f0fa87c9e9f5c5ea94 147 Pfam PF02036 SCP-2 sterol transfer family 65 133 2.9E-5 T 22-04-2016 IPR003033 SCP2 sterol-binding domain SRM_RS13980 d5664e62e65ef7f0fa87c9e9f5c5ea94 147 Gene3D G3DSA:3.30.1050.10 12 136 1.0E-8 T 22-04-2016 IPR003033 SCP2 sterol-binding domain SRM_RS13980 d5664e62e65ef7f0fa87c9e9f5c5ea94 147 SUPERFAMILY SSF55718 5 144 4.24E-16 T 22-04-2016 IPR003033 SCP2 sterol-binding domain SRM_RS06435 9bc03bed6479d179ea5d6ef86c82bf20 476 TIGRFAM TIGR01064 pyruv_kin: pyruvate kinase 3 475 5.4E-165 T 22-04-2016 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 SRM_RS06435 9bc03bed6479d179ea5d6ef86c82bf20 476 Pfam PF00224 Pyruvate kinase, barrel domain 3 339 7.2E-126 T 22-04-2016 IPR015793 Pyruvate kinase, barrel GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 SRM_RS06435 9bc03bed6479d179ea5d6ef86c82bf20 476 Pfam PF02887 Pyruvate kinase, alpha/beta domain 361 472 2.0E-24 T 22-04-2016 IPR015795 Pyruvate kinase, C-terminal KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 SRM_RS06435 9bc03bed6479d179ea5d6ef86c82bf20 476 PANTHER PTHR11817 1 475 1.2E-199 T 22-04-2016 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 SRM_RS06435 9bc03bed6479d179ea5d6ef86c82bf20 476 SUPERFAMILY SSF52935 324 475 6.02E-33 T 22-04-2016 IPR015795 Pyruvate kinase, C-terminal KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 SRM_RS06435 9bc03bed6479d179ea5d6ef86c82bf20 476 SUPERFAMILY SSF51621 167 342 4.0E-98 T 22-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 SRM_RS06435 9bc03bed6479d179ea5d6ef86c82bf20 476 SUPERFAMILY SSF51621 2 76 4.0E-98 T 22-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 SRM_RS06435 9bc03bed6479d179ea5d6ef86c82bf20 476 Gene3D G3DSA:3.20.20.60 168 325 2.7E-102 T 22-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 SRM_RS06435 9bc03bed6479d179ea5d6ef86c82bf20 476 Gene3D G3DSA:3.20.20.60 3 73 2.7E-102 T 22-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 SRM_RS06435 9bc03bed6479d179ea5d6ef86c82bf20 476 SUPERFAMILY SSF50800 71 164 5.58E-24 T 22-04-2016 IPR011037 Pyruvate kinase-like, insert domain SRM_RS06435 9bc03bed6479d179ea5d6ef86c82bf20 476 Gene3D G3DSA:3.40.1380.20 326 475 2.1E-38 T 22-04-2016 IPR015794 Pyruvate kinase, alpha/beta GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 SRM_RS06435 9bc03bed6479d179ea5d6ef86c82bf20 476 PRINTS PR01050 Pyruvate kinase family signature 60 76 8.0E-66 T 22-04-2016 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 SRM_RS06435 9bc03bed6479d179ea5d6ef86c82bf20 476 PRINTS PR01050 Pyruvate kinase family signature 293 311 8.0E-66 T 22-04-2016 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 SRM_RS06435 9bc03bed6479d179ea5d6ef86c82bf20 476 PRINTS PR01050 Pyruvate kinase family signature 216 242 8.0E-66 T 22-04-2016 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 SRM_RS06435 9bc03bed6479d179ea5d6ef86c82bf20 476 PRINTS PR01050 Pyruvate kinase family signature 186 200 8.0E-66 T 22-04-2016 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 SRM_RS06435 9bc03bed6479d179ea5d6ef86c82bf20 476 PRINTS PR01050 Pyruvate kinase family signature 268 292 8.0E-66 T 22-04-2016 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 SRM_RS06435 9bc03bed6479d179ea5d6ef86c82bf20 476 PRINTS PR01050 Pyruvate kinase family signature 312 328 8.0E-66 T 22-04-2016 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 SRM_RS06435 9bc03bed6479d179ea5d6ef86c82bf20 476 PRINTS PR01050 Pyruvate kinase family signature 243 267 8.0E-66 T 22-04-2016 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 SRM_RS06435 9bc03bed6479d179ea5d6ef86c82bf20 476 Gene3D G3DSA:2.40.33.10 74 166 1.4E-27 T 22-04-2016 IPR015806 Pyruvate kinase, beta-barrel insert domain GO:0004743|GO:0006096 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 SRM_RS07215 b29a89a9ad67367534a402811a0adf50 314 Gene3D G3DSA:3.40.50.300 2 233 7.0E-63 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SRM_RS07215 b29a89a9ad67367534a402811a0adf50 314 PANTHER PTHR24220:SF160 5 226 4.7E-100 T 22-04-2016 SRM_RS07215 b29a89a9ad67367534a402811a0adf50 314 PANTHER PTHR24220 5 226 4.7E-100 T 22-04-2016 SRM_RS07215 b29a89a9ad67367534a402811a0adf50 314 ProSitePatterns PS00211 ABC transporters family signature. 140 154 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 SRM_RS07215 b29a89a9ad67367534a402811a0adf50 314 SUPERFAMILY SSF52540 3 233 4.28E-56 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SRM_RS07215 b29a89a9ad67367534a402811a0adf50 314 Pfam PF00005 ABC transporter 26 167 1.4E-27 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 SRM_RS07215 b29a89a9ad67367534a402811a0adf50 314 SMART SM00382 35 215 1.0E-10 T 22-04-2016 IPR003593 AAA+ ATPase domain SRM_RS09615 665c46e4254105e5eba5d11c07169410 344 TIGRFAM TIGR00233 trpS: tryptophan--tRNA ligase 18 340 2.2E-81 T 22-04-2016 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2|Reactome: REACT_71 SRM_RS09615 665c46e4254105e5eba5d11c07169410 344 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 80 99 6.0E-25 T 22-04-2016 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2|Reactome: REACT_71 SRM_RS09615 665c46e4254105e5eba5d11c07169410 344 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 155 176 6.0E-25 T 22-04-2016 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2|Reactome: REACT_71 SRM_RS09615 665c46e4254105e5eba5d11c07169410 344 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 30 46 6.0E-25 T 22-04-2016 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2|Reactome: REACT_71 SRM_RS09615 665c46e4254105e5eba5d11c07169410 344 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 210 220 6.0E-25 T 22-04-2016 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2|Reactome: REACT_71 SRM_RS09615 665c46e4254105e5eba5d11c07169410 344 SUPERFAMILY SSF52374 19 340 1.2E-82 T 22-04-2016 SRM_RS09615 665c46e4254105e5eba5d11c07169410 344 Pfam PF00579 tRNA synthetases class I (W and Y) 18 295 3.1E-57 T 22-04-2016 IPR002305 Aminoacyl-tRNA synthetase, class Ic GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 SRM_RS09615 665c46e4254105e5eba5d11c07169410 344 Hamap MF_00140_B Tryptophan--tRNA ligase [trpS]. 17 341 35.436 T 22-04-2016 IPR024109 Tryptophan-tRNA ligase, bacterial-type GO:0004830 KEGG: 00970+6.1.1.2 SRM_RS09615 665c46e4254105e5eba5d11c07169410 344 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 26 35 - T 22-04-2016 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 SRM_RS09615 665c46e4254105e5eba5d11c07169410 344 Gene3D G3DSA:1.10.240.10 220 307 1.9E-31 T 22-04-2016 SRM_RS09615 665c46e4254105e5eba5d11c07169410 344 Gene3D G3DSA:3.40.50.620 17 219 2.5E-73 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold SRM_RS06950 03038cbfe8adcf024d60bbc0b82ee0a0 163 Pfam PF04214 Protein of unknown function, DUF 67 135 1.7E-30 T 22-04-2016 IPR007332 Protein of unknown function DUF411 SRM_RS09635 4070799a3410a3128d09e80c47215351 221 PANTHER PTHR22854 3 215 8.8E-58 T 22-04-2016 SRM_RS09635 4070799a3410a3128d09e80c47215351 221 Pfam PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase 6 204 7.6E-41 T 22-04-2016 IPR001240 N-(5'phosphoribosyl) anthranilate isomerase (PRAI) GO:0004640|GO:0006568 KEGG: 00400+5.3.1.24|UniPathway: UPA00035 SRM_RS09635 4070799a3410a3128d09e80c47215351 221 PANTHER PTHR22854:SF6 3 215 8.8E-58 T 22-04-2016 SRM_RS09635 4070799a3410a3128d09e80c47215351 221 SUPERFAMILY SSF51366 5 205 9.42E-54 T 22-04-2016 IPR011060 Ribulose-phosphate binding barrel GO:0003824|GO:0008152 SRM_RS09635 4070799a3410a3128d09e80c47215351 221 Hamap MF_00135 N-(5'-phosphoribosyl)anthranilate isomerase [trpF]. 3 209 36.096 T 22-04-2016 IPR001240 N-(5'phosphoribosyl) anthranilate isomerase (PRAI) GO:0004640|GO:0006568 KEGG: 00400+5.3.1.24|UniPathway: UPA00035 SRM_RS09635 4070799a3410a3128d09e80c47215351 221 Gene3D G3DSA:3.20.20.70 5 207 8.1E-63 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 SRM_RS08750 fadf9d5b2e65ef4da19e105bd9f63035 251 TIGRFAM TIGR03462 CarR_dom_SF: lycopene cyclase domain 1 95 4.2E-21 T 22-04-2016 IPR017825 Lycopene cyclase domain GO:0016872 KEGG: 00906+2.5.1.32+5.5.1.19|MetaCyc: PWY-5943|MetaCyc: PWY-5947|MetaCyc: PWY-7591|UniPathway: UPA00799|UniPathway: UPA00802 SRM_RS08750 fadf9d5b2e65ef4da19e105bd9f63035 251 TIGRFAM TIGR03462 CarR_dom_SF: lycopene cyclase domain 140 228 3.0E-17 T 22-04-2016 IPR017825 Lycopene cyclase domain GO:0016872 KEGG: 00906+2.5.1.32+5.5.1.19|MetaCyc: PWY-5943|MetaCyc: PWY-5947|MetaCyc: PWY-7591|UniPathway: UPA00799|UniPathway: UPA00802 SRM_RS15285 d6ff6bac3e093faf9ca635df1f02d3f5 365 SUPERFAMILY SSF51445 92 337 1.39E-29 T 22-04-2016 IPR017853 Glycoside hydrolase superfamily SRM_RS15285 d6ff6bac3e093faf9ca635df1f02d3f5 365 Gene3D G3DSA:3.20.20.80 115 332 5.0E-7 T 22-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 SRM_RS01950 34dd334132655abd2860b47be9c218a9 290 SUPERFAMILY SSF53448 1 134 4.41E-22 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases SRM_RS01950 34dd334132655abd2860b47be9c218a9 290 PANTHER PTHR10859 1 95 7.2E-17 T 22-04-2016 SRM_RS01950 34dd334132655abd2860b47be9c218a9 290 PANTHER PTHR10859:SF99 1 95 7.2E-17 T 22-04-2016 SRM_RS01950 34dd334132655abd2860b47be9c218a9 290 Gene3D G3DSA:3.90.550.10 2 89 5.2E-10 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases SRM_RS01950 34dd334132655abd2860b47be9c218a9 290 Pfam PF00535 Glycosyl transferase family 2 3 120 5.9E-13 T 22-04-2016 IPR001173 Glycosyltransferase 2-like SRM_RS04645 ada3beb49a9c1e57a9ad32d5bbdba4a4 277 PANTHER PTHR34990 13 265 7.7E-32 T 22-04-2016 SRM_RS04645 ada3beb49a9c1e57a9ad32d5bbdba4a4 277 Gene3D G3DSA:3.60.21.10 28 150 3.4E-20 T 22-04-2016 IPR029052 Metallo-dependent phosphatase-like SRM_RS04645 ada3beb49a9c1e57a9ad32d5bbdba4a4 277 Gene3D G3DSA:3.60.21.10 209 258 3.4E-20 T 22-04-2016 IPR029052 Metallo-dependent phosphatase-like SRM_RS04645 ada3beb49a9c1e57a9ad32d5bbdba4a4 277 Pfam PF00149 Calcineurin-like phosphoesterase 28 228 3.8E-8 T 22-04-2016 IPR004843 Calcineurin-like phosphoesterase domain, apaH type GO:0016787 SRM_RS04645 ada3beb49a9c1e57a9ad32d5bbdba4a4 277 SUPERFAMILY SSF56300 28 152 7.08E-21 T 22-04-2016 IPR029052 Metallo-dependent phosphatase-like SRM_RS04645 ada3beb49a9c1e57a9ad32d5bbdba4a4 277 SUPERFAMILY SSF56300 205 255 7.08E-21 T 22-04-2016 IPR029052 Metallo-dependent phosphatase-like SRM_RS07835 e57340c4820eef4ea0e210ed67d642b0 230 SUPERFAMILY SSF52402 10 222 1.68E-53 T 22-04-2016 SRM_RS07835 e57340c4820eef4ea0e210ed67d642b0 230 Gene3D G3DSA:3.40.50.620 10 149 5.0E-25 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold SRM_RS07835 e57340c4820eef4ea0e210ed67d642b0 230 Gene3D G3DSA:3.90.1490.10 151 220 9.4E-14 T 22-04-2016 SRM_RS07835 e57340c4820eef4ea0e210ed67d642b0 230 Pfam PF01902 Diphthamide synthase 11 212 1.1E-28 T 22-04-2016 IPR002761 Diphthamide synthase domain MetaCyc: PWY-6482|MetaCyc: PWY-7546|UniPathway: UPA00559 SRM_RS06965 bcc4d7a3efca6f94d2d818d6606d8157 233 Gene3D G3DSA:3.30.420.40 2 134 3.2E-40 T 22-04-2016 SRM_RS06965 bcc4d7a3efca6f94d2d818d6606d8157 233 TIGRFAM TIGR03725 T6A_YeaZ: tRNA threonylcarbamoyl adenosine modification protein YeaZ 3 221 1.7E-53 T 22-04-2016 IPR022496 tRNA threonylcarbamoyl adenosine modification protein YeaZ GO:0002949 SRM_RS06965 bcc4d7a3efca6f94d2d818d6606d8157 233 PANTHER PTHR11735 1 138 7.7E-42 T 22-04-2016 SRM_RS06965 bcc4d7a3efca6f94d2d818d6606d8157 233 PANTHER PTHR11735:SF11 1 138 7.7E-42 T 22-04-2016 SRM_RS06965 bcc4d7a3efca6f94d2d818d6606d8157 233 Pfam PF00814 Glycoprotease family 33 147 1.1E-25 T 22-04-2016 IPR000905 Gcp-like domain KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 SRM_RS06965 bcc4d7a3efca6f94d2d818d6606d8157 233 SUPERFAMILY SSF53067 2 103 3.84E-26 T 22-04-2016 SRM_RS06965 bcc4d7a3efca6f94d2d818d6606d8157 233 SUPERFAMILY SSF53067 111 219 8.29E-13 T 22-04-2016 SRM_RS11070 7b8fa4b1152c7f8e149083cb65754a93 586 SMART SM00282 194 332 0.0076 T 22-04-2016 IPR001791 Laminin G domain SRM_RS11070 7b8fa4b1152c7f8e149083cb65754a93 586 Gene3D G3DSA:2.60.120.200 168 340 9.2E-23 T 22-04-2016 IPR013320 Concanavalin A-like lectin/glucanase domain SRM_RS11070 7b8fa4b1152c7f8e149083cb65754a93 586 TIGRFAM TIGR04183 Por_Secre_tail: Por secretion system C-terminal sorting domain 508 583 8.1E-9 T 22-04-2016 IPR026444 Secretion system C-terminal sorting domain SRM_RS11070 7b8fa4b1152c7f8e149083cb65754a93 586 Pfam PF13385 Concanavalin A-like lectin/glucanases superfamily 183 339 8.1E-24 T 22-04-2016 SRM_RS11070 7b8fa4b1152c7f8e149083cb65754a93 586 SUPERFAMILY SSF49899 169 344 3.26E-28 T 22-04-2016 IPR013320 Concanavalin A-like lectin/glucanase domain SRM_RS11070 7b8fa4b1152c7f8e149083cb65754a93 586 SMART SM00560 194 337 2.0E-7 T 22-04-2016 IPR006558 LamG-like jellyroll fold SRM_RS01975 0ed16332f5d76635f162f0da2ee46d30 97 Pfam PF05402 Coenzyme PQQ synthesis protein D (PqqD) 22 92 5.0E-11 T 22-04-2016 IPR008792 Coenzyme PQQ synthesis D UniPathway: UPA00539 SRM_RS09770 3fc57082b2775e19451f81c4170d95b8 144 PANTHER PTHR33932 4 136 2.7E-28 T 22-04-2016 SRM_RS09770 3fc57082b2775e19451f81c4170d95b8 144 Pfam PF04039 Domain related to MnhB subunit of Na+/H+ antiporter 6 123 2.1E-32 T 22-04-2016 IPR007182 Na+/H+ antiporter MnhB subunit-related protein SRM_RS09770 3fc57082b2775e19451f81c4170d95b8 144 PANTHER PTHR33932:SF4 4 136 2.7E-28 T 22-04-2016 SRM_RS07090 1cb24234f9a4a695c871d37ad42587a8 145 Gene3D G3DSA:1.10.150.320 70 138 4.9E-18 T 22-04-2016 SRM_RS07090 1cb24234f9a4a695c871d37ad42587a8 145 PANTHER PTHR21180 70 137 4.9E-20 T 22-04-2016 SRM_RS07090 1cb24234f9a4a695c871d37ad42587a8 145 SUPERFAMILY SSF47781 61 139 8.78E-23 T 22-04-2016 IPR010994 RuvA domain 2-like Reactome: REACT_216 SRM_RS07090 1cb24234f9a4a695c871d37ad42587a8 145 Pfam PF12836 Helix-hairpin-helix motif 74 136 2.5E-19 T 22-04-2016 SRM_RS01265 f3ecdd2e11783586179f265165702e9b 109 SMART SM00028 20 53 26.0 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 SRM_RS01265 f3ecdd2e11783586179f265165702e9b 109 SMART SM00028 54 87 0.021 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 SRM_RS01265 f3ecdd2e11783586179f265165702e9b 109 SUPERFAMILY SSF48452 6 86 3.0E-15 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 SRM_RS01265 f3ecdd2e11783586179f265165702e9b 109 Gene3D G3DSA:1.25.40.10 10 83 1.5E-13 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 SRM_RS01265 f3ecdd2e11783586179f265165702e9b 109 Pfam PF13432 Tetratricopeptide repeat 24 78 5.4E-7 T 22-04-2016 SRM_RS15435 87e2e81b65233bc7678cd5d095261215 232 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 124 140 3.7E-24 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SRM_RS15435 87e2e81b65233bc7678cd5d095261215 232 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 171 188 3.7E-24 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SRM_RS15435 87e2e81b65233bc7678cd5d095261215 232 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 77 88 3.7E-24 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SRM_RS15435 87e2e81b65233bc7678cd5d095261215 232 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 2 19 3.7E-24 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SRM_RS15435 87e2e81b65233bc7678cd5d095261215 232 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 150 169 3.7E-24 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SRM_RS15435 87e2e81b65233bc7678cd5d095261215 232 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 1 191 4.2E-5 T 22-04-2016 SRM_RS15435 87e2e81b65233bc7678cd5d095261215 232 SUPERFAMILY SSF51735 2 216 2.01E-66 T 22-04-2016 IPR016040 NAD(P)-binding domain SRM_RS15435 87e2e81b65233bc7678cd5d095261215 232 Pfam PF00106 short chain dehydrogenase 2 188 1.0E-49 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SRM_RS15435 87e2e81b65233bc7678cd5d095261215 232 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 137 165 - T 22-04-2016 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 SRM_RS15435 87e2e81b65233bc7678cd5d095261215 232 Gene3D G3DSA:3.40.50.720 2 216 1.1E-67 T 22-04-2016 IPR016040 NAD(P)-binding domain SRM_RS15435 87e2e81b65233bc7678cd5d095261215 232 PANTHER PTHR24322 5 134 3.4E-50 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SRM_RS15435 87e2e81b65233bc7678cd5d095261215 232 PANTHER PTHR24322 150 186 3.4E-50 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SRM_RS04525 82e83104dd7fd697448e68ddef96c223 160 Pfam PF03703 Bacterial PH domain 67 146 2.5E-19 T 22-04-2016 IPR005182 Domain of unknown function DUF304 SRM_RS04525 82e83104dd7fd697448e68ddef96c223 160 PANTHER PTHR34473 1 152 3.5E-29 T 22-04-2016 SRM_RS13465 833219b3cc9ff75fb97fb499c0c55830 337 PANTHER PTHR10859 4 310 6.9E-120 T 22-04-2016 SRM_RS13465 833219b3cc9ff75fb97fb499c0c55830 337 PANTHER PTHR10859:SF100 4 310 6.9E-120 T 22-04-2016 SRM_RS13465 833219b3cc9ff75fb97fb499c0c55830 337 SUPERFAMILY SSF53448 5 273 4.08E-46 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases SRM_RS13465 833219b3cc9ff75fb97fb499c0c55830 337 Pfam PF00535 Glycosyl transferase family 2 19 176 2.6E-31 T 22-04-2016 IPR001173 Glycosyltransferase 2-like SRM_RS13465 833219b3cc9ff75fb97fb499c0c55830 337 Gene3D G3DSA:3.90.550.10 15 187 7.8E-27 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases SRM_RS05630 84636d78fdf56fd301fa456055033313 233 PIRSF PIRSF028451 10 232 1.2E-56 T 22-04-2016 IPR015996 Uncharacterised conserved protein UCP028451 SRM_RS05630 84636d78fdf56fd301fa456055033313 233 PANTHER PTHR36452:SF1 13 229 1.2E-24 T 22-04-2016 SRM_RS05630 84636d78fdf56fd301fa456055033313 233 PANTHER PTHR36452 13 229 1.2E-24 T 22-04-2016 SRM_RS05630 84636d78fdf56fd301fa456055033313 233 Pfam PF09365 Conserved hypothetical protein (DUF2461) 16 225 8.7E-54 T 22-04-2016 IPR012808 Conserved hypothetical protein CHP02453 SRM_RS05630 84636d78fdf56fd301fa456055033313 233 TIGRFAM TIGR02453 TIGR02453: TIGR02453 family protein 13 228 1.1E-57 T 22-04-2016 IPR012808 Conserved hypothetical protein CHP02453 SRM_RS10000 9eb7c7a43ce5d70b022a45820db207ab 63 Pfam PF07432 Histone H1-like protein Hc1 7 54 2.1E-5 T 22-04-2016 IPR010886 Histone H1-like Hc1 GO:0003677 SRM_RS06980 5a40d8b665c7fc631ee5b881034bf7ea 346 Gene3D G3DSA:2.130.10.10 17 335 1.3E-38 T 22-04-2016 IPR015943 WD40/YVTN repeat-like-containing domain GO:0005515 SRM_RS06980 5a40d8b665c7fc631ee5b881034bf7ea 346 SUPERFAMILY SSF51004 7 335 8.11E-41 T 22-04-2016 IPR011048 Cytochrome cd1-nitrite reductase-like, haem d1 domain SRM_RS01255 35676fa9b0b7c6a5b160450ba6823fee 202 PANTHER PTHR34478:SF2 3 201 7.5E-81 T 22-04-2016 SRM_RS01255 35676fa9b0b7c6a5b160450ba6823fee 202 PANTHER PTHR34478 3 201 7.5E-81 T 22-04-2016 SRM_RS01255 35676fa9b0b7c6a5b160450ba6823fee 202 SUPERFAMILY SSF140478 30 187 6.54E-54 T 22-04-2016 IPR023353 LemA-like domain SRM_RS01255 35676fa9b0b7c6a5b160450ba6823fee 202 Pfam PF04011 LemA family 9 198 1.3E-70 T 22-04-2016 IPR007156 LemA SRM_RS01255 35676fa9b0b7c6a5b160450ba6823fee 202 Gene3D G3DSA:1.20.1440.20 22 198 5.8E-64 T 22-04-2016 IPR023353 LemA-like domain SRM_RS12365 5829767a99fbd408071421b42979ec7e 325 Pfam PF03747 ADP-ribosylglycohydrolase 13 301 1.2E-51 T 22-04-2016 IPR005502 ADP-ribosylation/Crystallin J1 SRM_RS12365 5829767a99fbd408071421b42979ec7e 325 SUPERFAMILY SSF101478 7 322 2.35E-50 T 22-04-2016 IPR005502 ADP-ribosylation/Crystallin J1 SRM_RS12365 5829767a99fbd408071421b42979ec7e 325 PANTHER PTHR16222:SF12 9 321 1.1E-35 T 22-04-2016 SRM_RS12365 5829767a99fbd408071421b42979ec7e 325 PANTHER PTHR16222 9 321 1.1E-35 T 22-04-2016 SRM_RS10990 b8bb430f424f9c0dd194d2169256c0e4 160 Pfam PF13358 DDE superfamily endonuclease 9 118 1.3E-22 T 22-04-2016 SRM_RS10990 b8bb430f424f9c0dd194d2169256c0e4 160 SUPERFAMILY SSF53098 24 149 3.03E-10 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 SRM_RS10990 b8bb430f424f9c0dd194d2169256c0e4 160 Gene3D G3DSA:3.30.420.10 27 139 3.4E-5 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 SRM_RS02120 725455c817c9878d12c5f87f1e2c51c7 219 Pfam PF02517 CAAX protease self-immunity 123 208 1.0E-9 T 22-04-2016 IPR003675 CAAX amino terminal protease GO:0016020 SRM_RS06630 ef1666657f487c4ae6316d7896f9fdf8 179 PANTHER PTHR23089:SF16 1 163 2.6E-62 T 22-04-2016 SRM_RS06630 ef1666657f487c4ae6316d7896f9fdf8 179 Pfam PF01230 HIT domain 41 130 2.7E-12 T 22-04-2016 IPR001310 Histidine triad (HIT) protein SRM_RS06630 ef1666657f487c4ae6316d7896f9fdf8 179 SUPERFAMILY SSF54197 1 156 4.33E-36 T 22-04-2016 IPR011146 HIT-like domain GO:0003824 SRM_RS06630 ef1666657f487c4ae6316d7896f9fdf8 179 PANTHER PTHR23089 1 163 2.6E-62 T 22-04-2016 IPR001310 Histidine triad (HIT) protein SRM_RS06630 ef1666657f487c4ae6316d7896f9fdf8 179 Gene3D G3DSA:3.30.428.10 28 163 5.4E-34 T 22-04-2016 IPR011146 HIT-like domain GO:0003824 SRM_RS05655 efa4d044f9fa90723282aa03d120ef5b 258 PANTHER PTHR12029 36 235 1.9E-80 T 22-04-2016 SRM_RS05655 efa4d044f9fa90723282aa03d120ef5b 258 SUPERFAMILY SSF75217 51 226 2.09E-40 T 22-04-2016 IPR029028 Alpha/beta knot methyltransferases SRM_RS05655 efa4d044f9fa90723282aa03d120ef5b 258 PANTHER PTHR12029:SF45 36 235 1.9E-80 T 22-04-2016 SRM_RS05655 efa4d044f9fa90723282aa03d120ef5b 258 Pfam PF00588 SpoU rRNA Methylase family 71 208 7.0E-30 T 22-04-2016 IPR001537 tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008173 SRM_RS05655 efa4d044f9fa90723282aa03d120ef5b 258 Gene3D G3DSA:3.40.1280.10 52 221 2.2E-41 T 22-04-2016 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal SRM_RS06240 8014e7c53cab2328608968502178a57c 187 PANTHER PTHR35011:SF4 9 187 1.3E-49 T 22-04-2016 SRM_RS06240 8014e7c53cab2328608968502178a57c 187 Pfam PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component 29 166 2.8E-23 T 22-04-2016 IPR007387 Tripartite ATP-independent periplasmic transporter, DctQ component SRM_RS06240 8014e7c53cab2328608968502178a57c 187 PANTHER PTHR35011 9 187 1.3E-49 T 22-04-2016 SRM_RS14255 547c38d3b0d5a0a2bcd49b1de5461b4e 198 Pfam PF01914 MarC family integral membrane protein 2 195 1.9E-50 T 22-04-2016 IPR002771 Multiple antibiotic resistance (MarC)-related GO:0016021 SRM_RS14255 547c38d3b0d5a0a2bcd49b1de5461b4e 198 TIGRFAM TIGR00427 TIGR00427: membrane protein, MarC family 4 192 7.6E-32 T 22-04-2016 IPR002771 Multiple antibiotic resistance (MarC)-related GO:0016021 SRM_RS14255 547c38d3b0d5a0a2bcd49b1de5461b4e 198 PANTHER PTHR33508:SF4 1 196 1.1E-71 T 22-04-2016 SRM_RS14255 547c38d3b0d5a0a2bcd49b1de5461b4e 198 PANTHER PTHR33508 1 196 1.1E-71 T 22-04-2016 SRM_RS15260 9323accfe7c34433732a4d446086eecb 107 Pfam PF06155 Protein of unknown function (DUF971) 10 99 7.8E-23 T 22-04-2016 IPR010376 Domain of unknown function DUF971 Reactome: REACT_13|UniPathway: UPA00118 SRM_RS09200 259ed402b3aa179c3a5b27186715bc53 230 PANTHER PTHR30625:SF0 19 221 2.7E-53 T 22-04-2016 SRM_RS09200 259ed402b3aa179c3a5b27186715bc53 230 Pfam PF01618 MotA/TolQ/ExbB proton channel family 85 206 3.4E-34 T 22-04-2016 IPR002898 MotA/TolQ/ExbB proton channel GO:0006810|GO:0008565|GO:0016020 SRM_RS09200 259ed402b3aa179c3a5b27186715bc53 230 PANTHER PTHR30625 19 221 2.7E-53 T 22-04-2016 SRM_RS09020 5f33f16dc696a9cc29a625b271dfd613 247 SUPERFAMILY SSF69618 7 240 1.02E-47 T 22-04-2016 IPR003754 Tetrapyrrole biosynthesis, uroporphyrinogen III synthase GO:0004852|GO:0033014 KEGG: 00860+4.2.1.75|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 SRM_RS09020 5f33f16dc696a9cc29a625b271dfd613 247 Pfam PF02602 Uroporphyrinogen-III synthase HemD 19 237 2.6E-44 T 22-04-2016 IPR003754 Tetrapyrrole biosynthesis, uroporphyrinogen III synthase GO:0004852|GO:0033014 KEGG: 00860+4.2.1.75|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 SRM_RS09020 5f33f16dc696a9cc29a625b271dfd613 247 PANTHER PTHR12390 1 247 2.4E-58 T 22-04-2016 SRM_RS09020 5f33f16dc696a9cc29a625b271dfd613 247 Gene3D G3DSA:3.40.50.10090 136 241 2.9E-22 T 22-04-2016 SRM_RS09020 5f33f16dc696a9cc29a625b271dfd613 247 Gene3D G3DSA:3.40.50.10090 15 127 2.3E-18 T 22-04-2016 SRM_RS13850 56bd1bc12db401e0857a883c6693e013 325 Pfam PF02517 CAAX protease self-immunity 175 255 6.5E-13 T 22-04-2016 IPR003675 CAAX amino terminal protease GO:0016020 SRM_RS06955 d4b2fec65e620eb7e3cfc57a8895e88c 211 PANTHER PTHR41913 16 211 7.4E-36 T 22-04-2016 SRM_RS06955 d4b2fec65e620eb7e3cfc57a8895e88c 211 Pfam PF07920 Protein of unknown function (DUF1684) 66 205 4.2E-45 T 22-04-2016 IPR012467 Protein of unknown function DUF1684 SRM_RS06955 d4b2fec65e620eb7e3cfc57a8895e88c 211 PANTHER PTHR41913:SF1 16 211 7.4E-36 T 22-04-2016 SRM_RS01410 0aa2ae5f58570898d9308402f5e2b8e3 157 PIRSF PIRSF026509 1 155 2.2E-30 T 22-04-2016 IPR005134 Uncharacterised protein family UPF0114 SRM_RS01410 0aa2ae5f58570898d9308402f5e2b8e3 157 Pfam PF03350 Uncharacterized protein family, UPF0114 10 117 2.7E-18 T 22-04-2016 IPR005134 Uncharacterised protein family UPF0114 SRM_RS01755 dc7c4fd5503f39714d1202f03e7de6c1 368 Pfam PF04773 FecR protein 128 214 1.4E-11 T 22-04-2016 IPR006860 FecR protein SRM_RS01755 dc7c4fd5503f39714d1202f03e7de6c1 368 PANTHER PTHR30273 232 366 2.9E-41 T 22-04-2016 IPR012373 Fe(2+)-dicitrate sensor, transmembrane component SRM_RS01755 dc7c4fd5503f39714d1202f03e7de6c1 368 PANTHER PTHR30273 76 214 2.9E-41 T 22-04-2016 IPR012373 Fe(2+)-dicitrate sensor, transmembrane component SRM_RS01755 dc7c4fd5503f39714d1202f03e7de6c1 368 PANTHER PTHR30273:SF2 232 366 2.9E-41 T 22-04-2016 SRM_RS01755 dc7c4fd5503f39714d1202f03e7de6c1 368 PANTHER PTHR30273:SF2 76 214 2.9E-41 T 22-04-2016 SRM_RS14170 7ede672736fe0dfe05dae4156980a823 155 Pfam PF13399 LytR cell envelope-related transcriptional attenuator 57 145 7.1E-17 T 22-04-2016 IPR027381 Putative LytR/CpsA/Psr regulator, C-terminal domain SRM_RS09360 2be6b2c56d19f9045fd798f11560b5be 99 Gene3D G3DSA:2.60.40.10 28 94 1.3E-6 T 22-04-2016 IPR013783 Immunoglobulin-like fold SRM_RS09360 2be6b2c56d19f9045fd798f11560b5be 99 SUPERFAMILY SSF81296 11 97 3.83E-12 T 22-04-2016 IPR014756 Immunoglobulin E-set SRM_RS08330 cbca19591164d27d3c169f7981162149 359 PANTHER PTHR30164 83 357 8.1E-51 T 22-04-2016 SRM_RS08330 cbca19591164d27d3c169f7981162149 359 Gene3D G3DSA:3.40.390.10 130 337 4.5E-30 T 22-04-2016 IPR024079 Metallopeptidase, catalytic domain GO:0008237 SRM_RS08330 cbca19591164d27d3c169f7981162149 359 Pfam PF06167 Glucose-regulated metallo-peptidase M90 108 337 3.3E-59 T 22-04-2016 IPR010384 MtfA family SRM_RS08330 cbca19591164d27d3c169f7981162149 359 SUPERFAMILY SSF55486 143 338 2.2E-29 T 22-04-2016 SRM_RS06045 2180a2487c419e4105b2ff6e34fe4df1 279 SUPERFAMILY SSF52540 1 273 1.31E-48 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SRM_RS06045 2180a2487c419e4105b2ff6e34fe4df1 279 Gene3D G3DSA:3.40.50.300 3 273 2.9E-52 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SRM_RS06045 2180a2487c419e4105b2ff6e34fe4df1 279 PANTHER PTHR13696:SF52 1 274 1.2E-41 T 22-04-2016 SRM_RS06045 2180a2487c419e4105b2ff6e34fe4df1 279 PANTHER PTHR13696 1 274 1.2E-41 T 22-04-2016 SRM_RS06045 2180a2487c419e4105b2ff6e34fe4df1 279 Pfam PF13614 AAA domain 3 198 1.4E-36 T 22-04-2016 IPR025669 AAA domain SRM_RS05725 a05a5414ac99b5f853ee1c71714eefd8 139 Gene3D G3DSA:3.40.190.10 24 136 8.6E-12 T 22-04-2016 SRM_RS05725 a05a5414ac99b5f853ee1c71714eefd8 139 SUPERFAMILY SSF53850 21 136 2.42E-10 T 22-04-2016 SRM_RS13085 8da96e65483ecc9033e4e9ae937b8392 147 PANTHER PTHR11527:SF122 9 147 8.2E-37 T 22-04-2016 SRM_RS13085 8da96e65483ecc9033e4e9ae937b8392 147 Gene3D G3DSA:2.60.40.790 3 147 4.7E-48 T 22-04-2016 IPR008978 HSP20-like chaperone SRM_RS13085 8da96e65483ecc9033e4e9ae937b8392 147 SUPERFAMILY SSF49764 13 146 4.49E-40 T 22-04-2016 IPR008978 HSP20-like chaperone SRM_RS13085 8da96e65483ecc9033e4e9ae937b8392 147 PANTHER PTHR11527 9 147 8.2E-37 T 22-04-2016 IPR031107 Small heat shock protein HSP20 SRM_RS13085 8da96e65483ecc9033e4e9ae937b8392 147 Pfam PF00011 Hsp20/alpha crystallin family 48 147 8.2E-26 T 22-04-2016 IPR002068 Alpha crystallin/Hsp20 domain SRM_RS13680 a4a7e279139d6d36871c3c017abfc9b0 350 Pfam PF13905 Thioredoxin-like 205 301 1.7E-13 T 22-04-2016 IPR012336 Thioredoxin-like fold SRM_RS13680 a4a7e279139d6d36871c3c017abfc9b0 350 PANTHER PTHR10681 175 308 4.0E-19 T 22-04-2016 SRM_RS13680 a4a7e279139d6d36871c3c017abfc9b0 350 PANTHER PTHR10681:SF68 175 308 4.0E-19 T 22-04-2016 SRM_RS13680 a4a7e279139d6d36871c3c017abfc9b0 350 SUPERFAMILY SSF52833 177 324 2.05E-28 T 22-04-2016 IPR012336 Thioredoxin-like fold SRM_RS13680 a4a7e279139d6d36871c3c017abfc9b0 350 Gene3D G3DSA:3.40.30.10 23 45 2.3E-40 T 22-04-2016 IPR012336 Thioredoxin-like fold SRM_RS13680 a4a7e279139d6d36871c3c017abfc9b0 350 Gene3D G3DSA:3.40.30.10 176 325 2.3E-40 T 22-04-2016 IPR012336 Thioredoxin-like fold SRM_RS07425 46159e1626f51a109d214c7f488e061d 210 Gene3D G3DSA:3.20.20.70 6 208 2.3E-48 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 SRM_RS07425 46159e1626f51a109d214c7f488e061d 210 Pfam PF02581 Thiamine monophosphate synthase/TENI 20 189 2.8E-37 T 22-04-2016 IPR003733 Thiamine phosphate synthase GO:0004789|GO:0009228 KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357|UniPathway: UPA00060 SRM_RS07425 46159e1626f51a109d214c7f488e061d 210 SUPERFAMILY SSF51391 4 205 3.14E-44 T 22-04-2016 IPR022998 Thiamin phosphate synthase superfamily KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357|UniPathway: UPA00060 SRM_RS07425 46159e1626f51a109d214c7f488e061d 210 PANTHER PTHR20857 2 208 7.6E-30 T 22-04-2016 SRM_RS03220 da92f8a0643b735c132e083bf72cacb4 265 Gene3D G3DSA:1.10.8.50 133 261 4.9E-28 T 22-04-2016 SRM_RS03220 da92f8a0643b735c132e083bf72cacb4 265 SUPERFAMILY SSF81624 2 136 2.62E-23 T 22-04-2016 IPR012319 Formamidopyrimidine-DNA glycosylase, catalytic domain GO:0003684|GO:0003906|GO:0006284|GO:0008270|GO:0016799 SRM_RS03220 da92f8a0643b735c132e083bf72cacb4 265 PANTHER PTHR22993 1 264 4.2E-52 T 22-04-2016 SRM_RS03220 da92f8a0643b735c132e083bf72cacb4 265 Gene3D G3DSA:3.20.190.10 2 129 5.4E-24 T 22-04-2016 SRM_RS03220 da92f8a0643b735c132e083bf72cacb4 265 Pfam PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain 1 118 9.0E-21 T 22-04-2016 IPR012319 Formamidopyrimidine-DNA glycosylase, catalytic domain GO:0003684|GO:0003906|GO:0006284|GO:0008270|GO:0016799 SRM_RS03220 da92f8a0643b735c132e083bf72cacb4 265 SMART SM00898 2 119 5.1E-23 T 22-04-2016 IPR012319 Formamidopyrimidine-DNA glycosylase, catalytic domain GO:0003684|GO:0003906|GO:0006284|GO:0008270|GO:0016799 SRM_RS03220 da92f8a0643b735c132e083bf72cacb4 265 SUPERFAMILY SSF46946 133 215 7.98E-22 T 22-04-2016 IPR010979 Ribosomal protein S13-like, H2TH GO:0003676 SRM_RS03220 da92f8a0643b735c132e083bf72cacb4 265 SMART SM01232 133 219 7.5E-28 T 22-04-2016 IPR015886 DNA glycosylase/AP lyase, H2TH DNA-binding GO:0003684|GO:0003906|GO:0006289|GO:0008270|GO:0016799 SRM_RS03220 da92f8a0643b735c132e083bf72cacb4 265 Pfam PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain 134 216 5.3E-22 T 22-04-2016 IPR015886 DNA glycosylase/AP lyase, H2TH DNA-binding GO:0003684|GO:0003906|GO:0006289|GO:0008270|GO:0016799 SRM_RS12290 2fc789ec69606cf66c157dd1bb084689 200 PIRSF PIRSF000847 11 193 2.1E-30 T 22-04-2016 IPR004570 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase GO:0008444|GO:0008654|GO:0016021 KEGG: 00564+2.7.8.5|MetaCyc: PWY-5269|MetaCyc: PWY-5668|UniPathway: UPA00084 SRM_RS12290 2fc789ec69606cf66c157dd1bb084689 200 PANTHER PTHR14269 8 181 2.2E-15 T 22-04-2016 SRM_RS12290 2fc789ec69606cf66c157dd1bb084689 200 ProSitePatterns PS00379 CDP-alcohol phosphatidyltransferases signature. 58 80 - T 22-04-2016 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 SRM_RS12290 2fc789ec69606cf66c157dd1bb084689 200 Pfam PF01066 CDP-alcohol phosphatidyltransferase 16 80 6.5E-15 T 22-04-2016 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 SRM_RS14285 84e1e829f254a17702a7935f1ee3b903 213 SMART SM00028 19 52 84.0 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 SRM_RS14285 84e1e829f254a17702a7935f1ee3b903 213 SMART SM00028 58 91 40.0 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 SRM_RS14285 84e1e829f254a17702a7935f1ee3b903 213 SMART SM00028 95 128 0.16 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 SRM_RS14285 84e1e829f254a17702a7935f1ee3b903 213 SUPERFAMILY SSF48452 26 143 4.85E-14 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 SRM_RS14285 84e1e829f254a17702a7935f1ee3b903 213 Gene3D G3DSA:1.25.40.10 25 191 1.9E-14 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 SRM_RS09610 ec2f2ca6c46223f07d45ab72b7fc2c28 159 SUPERFAMILY SSF47240 40 155 8.69E-5 T 22-04-2016 IPR009078 Ferritin-like superfamily SRM_RS13025 7907fb5d0df4e4f61418bb1efc80698b 169 PANTHER PTHR10545 1 166 4.7E-54 T 22-04-2016 SRM_RS13025 7907fb5d0df4e4f61418bb1efc80698b 169 Pfam PF00583 Acetyltransferase (GNAT) family 64 143 2.4E-15 T 22-04-2016 IPR000182 GNAT domain GO:0008080 SRM_RS13025 7907fb5d0df4e4f61418bb1efc80698b 169 Gene3D G3DSA:3.40.630.30 4 163 1.1E-52 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase SRM_RS13025 7907fb5d0df4e4f61418bb1efc80698b 169 SUPERFAMILY SSF55729 7 157 3.71E-34 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase SRM_RS15575 e047ec8c4e307c255af7a999266cb2d3 451 Gene3D G3DSA:1.20.1600.10 41 436 3.0E-50 T 22-04-2016 SRM_RS15575 e047ec8c4e307c255af7a999266cb2d3 451 PANTHER PTHR30203 43 451 8.4E-42 T 22-04-2016 SRM_RS15575 e047ec8c4e307c255af7a999266cb2d3 451 SUPERFAMILY SSF56954 38 435 5.62E-60 T 22-04-2016 SRM_RS15575 e047ec8c4e307c255af7a999266cb2d3 451 Pfam PF02321 Outer membrane efflux protein 251 430 1.8E-17 T 22-04-2016 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 SRM_RS15575 e047ec8c4e307c255af7a999266cb2d3 451 Pfam PF02321 Outer membrane efflux protein 46 222 4.9E-20 T 22-04-2016 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 SRM_RS15015 c4344628e719f3c35d0225f796243184 612 PANTHER PTHR11206:SF153 140 578 2.0E-114 T 22-04-2016 SRM_RS15015 c4344628e719f3c35d0225f796243184 612 TIGRFAM TIGR00797 matE: MATE efflux family protein 151 556 5.7E-79 T 22-04-2016 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: REACT_15518|Reactome: REACT_20633 SRM_RS15015 c4344628e719f3c35d0225f796243184 612 PANTHER PTHR11206 140 578 2.0E-114 T 22-04-2016 SRM_RS15015 c4344628e719f3c35d0225f796243184 612 Pfam PF01554 MatE 377 543 6.6E-30 T 22-04-2016 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: REACT_15518|Reactome: REACT_20633 SRM_RS15015 c4344628e719f3c35d0225f796243184 612 Pfam PF01554 MatE 151 308 3.4E-29 T 22-04-2016 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: REACT_15518|Reactome: REACT_20633 SRM_RS14120 e80af33fedf5d1f75ad50711c7de6bf6 103 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 51 66 5.7E-10 T 22-04-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 SRM_RS14120 e80af33fedf5d1f75ad50711c7de6bf6 103 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 66 81 5.7E-10 T 22-04-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 SRM_RS14120 e80af33fedf5d1f75ad50711c7de6bf6 103 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 18 33 5.7E-10 T 22-04-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 SRM_RS14120 e80af33fedf5d1f75ad50711c7de6bf6 103 SUPERFAMILY SSF46785 5 90 8.76E-24 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SRM_RS14120 e80af33fedf5d1f75ad50711c7de6bf6 103 Pfam PF12840 Helix-turn-helix domain 16 74 1.7E-12 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SRM_RS14120 e80af33fedf5d1f75ad50711c7de6bf6 103 Gene3D G3DSA:1.10.10.10 5 96 9.2E-27 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SRM_RS14120 e80af33fedf5d1f75ad50711c7de6bf6 103 SMART SM00418 16 95 3.1E-23 T 22-04-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 SRM_RS14120 e80af33fedf5d1f75ad50711c7de6bf6 103 PANTHER PTHR33154 1 102 2.9E-20 T 22-04-2016 SRM_RS04795 838f9ebcfa64de31943c162cc0930526 273 SUPERFAMILY SSF54999 172 268 2.22E-11 T 22-04-2016 IPR027486 Ribosomal protein S10 domain SRM_RS04795 838f9ebcfa64de31943c162cc0930526 273 Hamap MF_00508 30S ribosomal protein S10 [rpsJ]. 169 270 13.255 T 22-04-2016 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 SRM_RS04795 838f9ebcfa64de31943c162cc0930526 273 Gene3D G3DSA:3.30.70.600 172 269 4.1E-13 T 22-04-2016 IPR027486 Ribosomal protein S10 domain SRM_RS04795 838f9ebcfa64de31943c162cc0930526 273 Pfam PF00338 Ribosomal protein S10p/S20e 173 268 2.2E-11 T 22-04-2016 IPR027486 Ribosomal protein S10 domain SRM_RS04795 838f9ebcfa64de31943c162cc0930526 273 SMART SM01403 173 269 6.8E-7 T 22-04-2016 IPR027486 Ribosomal protein S10 domain SRM_RS14575 b54fcc4113c3beef8aa47121caf1a215 493 Pfam PF02465 Flagellar hook-associated protein 2 N-terminus 15 108 1.2E-13 T 22-04-2016 IPR003481 Flagellar hook-associated protein 2, N-terminal GO:0009424 SRM_RS14575 b54fcc4113c3beef8aa47121caf1a215 493 Pfam PF07195 Flagellar hook-associated protein 2 C-terminus 264 481 6.8E-47 T 22-04-2016 IPR010809 Flagellar hook-associated 2, C-terminal GO:0007155|GO:0009288 SRM_RS14575 b54fcc4113c3beef8aa47121caf1a215 493 PANTHER PTHR30288 1 492 5.2E-38 T 22-04-2016 SRM_RS14575 b54fcc4113c3beef8aa47121caf1a215 493 PANTHER PTHR30288:SF0 1 492 5.2E-38 T 22-04-2016 SRM_RS10905 38ddcaf3dcbc8a1184b828175b20d595 360 Gene3D G3DSA:3.20.20.70 52 247 2.1E-97 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 SRM_RS10905 38ddcaf3dcbc8a1184b828175b20d595 360 Gene3D G3DSA:3.20.20.70 281 355 2.1E-97 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 SRM_RS10905 38ddcaf3dcbc8a1184b828175b20d595 360 SMART SM01133 73 336 4.9E-37 T 22-04-2016 IPR002915 DeoC/FbaB/ lacD aldolase GO:0016829 SRM_RS10905 38ddcaf3dcbc8a1184b828175b20d595 360 Pfam PF01791 DeoC/LacD family aldolase 73 336 2.3E-63 T 22-04-2016 IPR002915 DeoC/FbaB/ lacD aldolase GO:0016829 SRM_RS10905 38ddcaf3dcbc8a1184b828175b20d595 360 SUPERFAMILY SSF51569 281 354 8.42E-65 T 22-04-2016 SRM_RS10905 38ddcaf3dcbc8a1184b828175b20d595 360 SUPERFAMILY SSF51569 63 247 8.42E-65 T 22-04-2016 SRM_RS06615 131fe1dc052130f424fbe685df7b08e8 126 SUPERFAMILY SSF47729 8 101 1.77E-14 T 22-04-2016 IPR010992 Integration host factor (IHF)-like DNA-binding domain GO:0003677 SRM_RS06615 131fe1dc052130f424fbe685df7b08e8 126 Gene3D G3DSA:4.10.520.10 9 101 4.9E-16 T 22-04-2016 IPR010992 Integration host factor (IHF)-like DNA-binding domain GO:0003677 SRM_RS06615 131fe1dc052130f424fbe685df7b08e8 126 PANTHER PTHR33175 8 98 1.3E-13 T 22-04-2016 SRM_RS06615 131fe1dc052130f424fbe685df7b08e8 126 SMART SM00411 8 101 2.6E-9 T 22-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 SRM_RS06615 131fe1dc052130f424fbe685df7b08e8 126 Pfam PF00216 Bacterial DNA-binding protein 9 100 9.1E-19 T 22-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 SRM_RS06615 131fe1dc052130f424fbe685df7b08e8 126 PANTHER PTHR33175:SF5 8 98 1.3E-13 T 22-04-2016 SRM_RS06615 131fe1dc052130f424fbe685df7b08e8 126 PRINTS PR01727 Prokaryotic integration host factor signature 69 82 4.0E-7 T 22-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 SRM_RS06615 131fe1dc052130f424fbe685df7b08e8 126 PRINTS PR01727 Prokaryotic integration host factor signature 50 65 4.0E-7 T 22-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 SRM_RS06615 131fe1dc052130f424fbe685df7b08e8 126 PRINTS PR01727 Prokaryotic integration host factor signature 85 99 4.0E-7 T 22-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 SRM_RS13430 97a7b22978d69ff725af8cdfc6f6f23e 360 Pfam PF13531 Bacterial extracellular solute-binding protein 29 306 3.3E-16 T 22-04-2016 SRM_RS13430 97a7b22978d69ff725af8cdfc6f6f23e 360 SUPERFAMILY SSF53850 27 344 2.97E-52 T 22-04-2016 SRM_RS13430 97a7b22978d69ff725af8cdfc6f6f23e 360 PANTHER PTHR30006:SF6 3 348 1.9E-44 T 22-04-2016 SRM_RS13430 97a7b22978d69ff725af8cdfc6f6f23e 360 Gene3D G3DSA:3.40.190.10 291 335 7.3E-28 T 22-04-2016 SRM_RS13430 97a7b22978d69ff725af8cdfc6f6f23e 360 Gene3D G3DSA:3.40.190.10 1 121 7.3E-28 T 22-04-2016 SRM_RS13430 97a7b22978d69ff725af8cdfc6f6f23e 360 PANTHER PTHR30006 3 348 1.9E-44 T 22-04-2016 SRM_RS13430 97a7b22978d69ff725af8cdfc6f6f23e 360 Gene3D G3DSA:3.40.190.10 126 290 1.0E-48 T 22-04-2016 SRM_RS06395 73380dcff67d0a7111a5e806ef3216de 206 Gene3D G3DSA:3.40.50.150 57 182 2.6E-23 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SRM_RS06395 73380dcff67d0a7111a5e806ef3216de 206 Pfam PF13847 Methyltransferase domain 74 135 1.1E-10 T 22-04-2016 IPR025714 Methyltransferase domain SRM_RS06395 73380dcff67d0a7111a5e806ef3216de 206 PANTHER PTHR13610:SF9 47 206 1.5E-58 T 22-04-2016 SRM_RS06395 73380dcff67d0a7111a5e806ef3216de 206 SUPERFAMILY SSF53335 32 200 4.22E-32 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SRM_RS06395 73380dcff67d0a7111a5e806ef3216de 206 PANTHER PTHR13610 47 206 1.5E-58 T 22-04-2016 IPR026170 FAM173 family SRM_RS15960 47272038139bd9540de12b0f6f411677 414 Pfam PF00534 Glycosyl transferases group 1 217 375 5.9E-34 T 22-04-2016 IPR001296 Glycosyl transferase, family 1 SRM_RS15960 47272038139bd9540de12b0f6f411677 414 SUPERFAMILY SSF53756 16 392 7.85E-61 T 22-04-2016 SRM_RS15960 47272038139bd9540de12b0f6f411677 414 PANTHER PTHR12526 73 392 1.4E-46 T 22-04-2016 SRM_RS15960 47272038139bd9540de12b0f6f411677 414 PANTHER PTHR12526 1 40 1.4E-46 T 22-04-2016 SRM_RS15960 47272038139bd9540de12b0f6f411677 414 Gene3D G3DSA:3.40.50.2000 216 376 2.4E-26 T 22-04-2016 SRM_RS15960 47272038139bd9540de12b0f6f411677 414 PANTHER PTHR12526:SF375 73 392 1.4E-46 T 22-04-2016 SRM_RS15960 47272038139bd9540de12b0f6f411677 414 PANTHER PTHR12526:SF375 1 40 1.4E-46 T 22-04-2016 SRM_RS07265 69659fa38b285904ab699a7a213e1f86 385 SUPERFAMILY SSF56935 41 374 1.19E-11 T 22-04-2016 SRM_RS07265 69659fa38b285904ab699a7a213e1f86 385 Gene3D G3DSA:2.40.160.60 310 374 8.5E-7 T 22-04-2016 SRM_RS07265 69659fa38b285904ab699a7a213e1f86 385 Gene3D G3DSA:2.40.160.60 43 183 3.1E-10 T 22-04-2016 SRM_RS14830 5d3c10911c6c71dd82db7cc147e86254 218 SUPERFAMILY SSF109604 11 215 8.48E-61 T 22-04-2016 SRM_RS14830 5d3c10911c6c71dd82db7cc147e86254 218 PANTHER PTHR33594 13 216 3.6E-57 T 22-04-2016 SRM_RS14830 5d3c10911c6c71dd82db7cc147e86254 218 Pfam PF01966 HD domain 34 134 8.8E-8 T 22-04-2016 IPR006674 HD domain SRM_RS14830 5d3c10911c6c71dd82db7cc147e86254 218 Gene3D G3DSA:1.10.3210.10 13 148 6.0E-43 T 22-04-2016 IPR006674 HD domain SRM_RS14830 5d3c10911c6c71dd82db7cc147e86254 218 Gene3D G3DSA:1.10.3210.10 187 216 6.0E-43 T 22-04-2016 IPR006674 HD domain SRM_RS14830 5d3c10911c6c71dd82db7cc147e86254 218 PANTHER PTHR33594:SF1 13 216 3.6E-57 T 22-04-2016 SRM_RS09825 1f7fe28324ecda4ad36c282baf95ddc2 217 PANTHER PTHR31303 7 158 2.5E-13 T 22-04-2016 SRM_RS03860 e1b8a4ba8fe4ab2e1cb689d291db0e3a 221 Pfam PF13358 DDE superfamily endonuclease 31 177 6.8E-29 T 22-04-2016 SRM_RS04125 e4ad6af746ecb7845d8f2dc4998f06bd 349 SUPERFAMILY SSF46785 139 195 2.05E-6 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SRM_RS04125 e4ad6af746ecb7845d8f2dc4998f06bd 349 Pfam PF09952 Transcriptional regulator, AbiEi antitoxin, Type IV TA system 197 344 1.8E-24 T 22-04-2016 IPR019238 Transcriptional regulator, AbiEi_2 antitoxin, Type IV TA system SRM_RS04125 e4ad6af746ecb7845d8f2dc4998f06bd 349 Gene3D G3DSA:1.10.10.10 146 193 1.3E-5 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SRM_RS07405 043ff2ede961b85f4f25ffb4d4966ffa 408 Pfam PF01266 FAD dependent oxidoreductase 56 386 3.8E-46 T 22-04-2016 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 SRM_RS07405 043ff2ede961b85f4f25ffb4d4966ffa 408 Gene3D G3DSA:3.50.50.60 182 266 1.3E-34 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SRM_RS07405 043ff2ede961b85f4f25ffb4d4966ffa 408 Gene3D G3DSA:3.50.50.60 353 389 1.3E-34 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SRM_RS07405 043ff2ede961b85f4f25ffb4d4966ffa 408 Gene3D G3DSA:3.50.50.60 51 131 1.3E-34 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SRM_RS07405 043ff2ede961b85f4f25ffb4d4966ffa 408 SUPERFAMILY SSF51905 55 330 6.91E-38 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SRM_RS07405 043ff2ede961b85f4f25ffb4d4966ffa 408 PANTHER PTHR13847 50 386 3.0E-33 T 22-04-2016 SRM_RS07405 043ff2ede961b85f4f25ffb4d4966ffa 408 Gene3D G3DSA:3.30.9.10 267 348 1.1E-8 T 22-04-2016 SRM_RS14995 fe90199a456634a168c22283a5f98543 1066 PANTHER PTHR15036 177 483 8.9E-23 T 22-04-2016 SRM_RS14995 fe90199a456634a168c22283a5f98543 1066 SUPERFAMILY SSF49313 296 384 5.14E-6 T 22-04-2016 IPR015919 Cadherin-like GO:0005509|GO:0016020 SRM_RS14995 fe90199a456634a168c22283a5f98543 1066 Gene3D G3DSA:2.60.40.60 295 394 2.6E-7 T 22-04-2016 IPR002126 Cadherin GO:0005509|GO:0007156|GO:0016020 SRM_RS14995 fe90199a456634a168c22283a5f98543 1066 TIGRFAM TIGR04183 Por_Secre_tail: Por secretion system C-terminal sorting domain 988 1064 1.0E-11 T 22-04-2016 IPR026444 Secretion system C-terminal sorting domain SRM_RS14995 fe90199a456634a168c22283a5f98543 1066 Pfam PF16184 Cadherin-like 182 275 2.2E-19 T 22-04-2016 SRM_RS14995 fe90199a456634a168c22283a5f98543 1066 Pfam PF16184 Cadherin-like 359 485 3.0E-22 T 22-04-2016 SRM_RS13030 accd937112de977a8d67a22e0bfb53ab 518 Gene3D G3DSA:3.40.50.300 41 247 2.4E-20 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SRM_RS13030 accd937112de977a8d67a22e0bfb53ab 518 SUPERFAMILY SSF52540 42 91 2.11E-16 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SRM_RS13030 accd937112de977a8d67a22e0bfb53ab 518 SUPERFAMILY SSF52540 136 348 2.11E-16 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SRM_RS13030 accd937112de977a8d67a22e0bfb53ab 518 PANTHER PTHR30267:SF3 8 478 1.9E-142 T 22-04-2016 SRM_RS13030 accd937112de977a8d67a22e0bfb53ab 518 PANTHER PTHR30267 8 478 1.9E-142 T 22-04-2016 SRM_RS03185 cb838c56814a98982a2f513f1e6c3ea3 348 SUPERFAMILY SSF52540 152 318 6.38E-8 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SRM_RS03185 cb838c56814a98982a2f513f1e6c3ea3 348 Gene3D G3DSA:3.40.50.300 149 279 4.4E-5 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SRM_RS01730 7e1e0cadcca451d30965ab02c6e396a7 487 PANTHER PTHR33627 35 434 1.4E-62 T 22-04-2016 SRM_RS01730 7e1e0cadcca451d30965ab02c6e396a7 487 PANTHER PTHR33627:SF1 35 434 1.4E-62 T 22-04-2016 SRM_RS01730 7e1e0cadcca451d30965ab02c6e396a7 487 SUPERFAMILY SSF53098 48 438 1.44E-13 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 SRM_RS01730 7e1e0cadcca451d30965ab02c6e396a7 487 Pfam PF13546 DDE superfamily endonuclease 36 322 3.5E-62 T 22-04-2016 SRM_RS09090 c11b40fba0f718d2e9e3dc77806c38f6 152 Gene3D G3DSA:3.40.50.450 5 102 3.7E-6 T 22-04-2016 SRM_RS09090 c11b40fba0f718d2e9e3dc77806c38f6 152 SUPERFAMILY SSF102405 4 103 1.31E-7 T 22-04-2016 SRM_RS09090 c11b40fba0f718d2e9e3dc77806c38f6 152 Pfam PF12694 Putative molybdenum carrier 6 149 4.7E-59 T 22-04-2016 IPR024755 Molybdenum cofactor carrier, putative SRM_RS15200 990782a1cbe1fe0fe9371f4f11c78124 538 Gene3D G3DSA:1.20.1600.10 92 522 2.1E-49 T 22-04-2016 SRM_RS15200 990782a1cbe1fe0fe9371f4f11c78124 538 Pfam PF02321 Outer membrane efflux protein 93 297 6.9E-17 T 22-04-2016 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 SRM_RS15200 990782a1cbe1fe0fe9371f4f11c78124 538 Pfam PF02321 Outer membrane efflux protein 329 519 8.3E-30 T 22-04-2016 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 SRM_RS15200 990782a1cbe1fe0fe9371f4f11c78124 538 PANTHER PTHR30026 83 526 3.2E-43 T 22-04-2016 SRM_RS15200 990782a1cbe1fe0fe9371f4f11c78124 538 SUPERFAMILY SSF56954 55 522 4.45E-60 T 22-04-2016 SRM_RS00875 530e7351b49ba551bd37e5c13e0b7c19 97 SUPERFAMILY SSF63562 7 94 6.54E-6 T 22-04-2016 IPR006110 RNA polymerase, subunit omega/K/RPB6 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 SRM_RS00875 530e7351b49ba551bd37e5c13e0b7c19 97 Pfam PF01192 RNA polymerase Rpb6 11 89 4.7E-6 T 22-04-2016 IPR006110 RNA polymerase, subunit omega/K/RPB6 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 SRM_RS00875 530e7351b49ba551bd37e5c13e0b7c19 97 Gene3D G3DSA:3.90.940.10 7 93 3.5E-6 T 22-04-2016 IPR012293 RNA polymerase subunit, RPB6/omega GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 SRM_RS00875 530e7351b49ba551bd37e5c13e0b7c19 97 SMART SM01409 10 91 1.8E-7 T 22-04-2016 IPR006110 RNA polymerase, subunit omega/K/RPB6 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 SRM_RS03445 9e22d9f079c7c135448b17abee20fc8b 682 SUPERFAMILY SSF49452 180 251 3.73E-5 T 22-04-2016 IPR013784 Carbohydrate-binding-like fold GO:0030246 SRM_RS03445 9e22d9f079c7c135448b17abee20fc8b 682 Pfam PF13205 Bacterial Ig-like domain 74 175 6.8E-14 T 22-04-2016 IPR032812 SbsA, Ig-like domain SRM_RS03400 94a2d2338a3933ea3efdb64e03342693 183 SUPERFAMILY SSF109854 27 157 1.83E-9 T 22-04-2016 SRM_RS03400 94a2d2338a3933ea3efdb64e03342693 183 Gene3D G3DSA:1.20.120.450 32 153 2.4E-14 T 22-04-2016 IPR027369 DinB/YfiT-like putative metal-dependent hydrolase SRM_RS03400 94a2d2338a3933ea3efdb64e03342693 183 Pfam PF12867 DinB superfamily 32 154 1.5E-5 T 22-04-2016 IPR024775 DinB-like domain SRM_RS13415 35380a204b2fdc02a42eca153abd0a3e 175 Pfam PF07853 Protein of unknown function (DUF1648) 12 48 3.1E-7 T 22-04-2016 IPR012867 Domain of unknown function DUF1648 SRM_RS15450 6d8e7c21146ed3e3e061cd6cf2b29415 152 Pfam PF00583 Acetyltransferase (GNAT) family 58 140 5.4E-14 T 22-04-2016 IPR000182 GNAT domain GO:0008080 SRM_RS15450 6d8e7c21146ed3e3e061cd6cf2b29415 152 PANTHER PTHR23091 7 141 1.2E-20 T 22-04-2016 SRM_RS15450 6d8e7c21146ed3e3e061cd6cf2b29415 152 SUPERFAMILY SSF55729 7 143 1.72E-28 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase SRM_RS15450 6d8e7c21146ed3e3e061cd6cf2b29415 152 Gene3D G3DSA:3.40.630.30 3 103 9.2E-34 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase SRM_RS15450 6d8e7c21146ed3e3e061cd6cf2b29415 152 PANTHER PTHR23091:SF255 7 141 1.2E-20 T 22-04-2016 SRM_RS02770 fec8511ab51b8ae8cc96027cb6282982 616 PANTHER PTHR11819:SF77 4 556 6.3E-171 T 22-04-2016 SRM_RS02770 fec8511ab51b8ae8cc96027cb6282982 616 PANTHER PTHR11819:SF77 590 616 6.3E-171 T 22-04-2016 SRM_RS02770 fec8511ab51b8ae8cc96027cb6282982 616 Pfam PF00474 Sodium:solute symporter family 36 458 1.1E-25 T 22-04-2016 IPR001734 Sodium/solute symporter GO:0005215|GO:0006810|GO:0016020|GO:0055085 SRM_RS02770 fec8511ab51b8ae8cc96027cb6282982 616 PANTHER PTHR11819 4 556 6.3E-171 T 22-04-2016 IPR001734 Sodium/solute symporter GO:0005215|GO:0006810|GO:0016020|GO:0055085 SRM_RS02770 fec8511ab51b8ae8cc96027cb6282982 616 PANTHER PTHR11819 590 616 6.3E-171 T 22-04-2016 IPR001734 Sodium/solute symporter GO:0005215|GO:0006810|GO:0016020|GO:0055085 SRM_RS11635 775907efbedc8a0c64c9586eff2ea9b6 455 Pfam PF11449 Putative, 10TM heavy-metal exporter 6 444 1.1E-120 T 22-04-2016 IPR021552 Putative, 10TM heavy-metal exporter SRM_RS03855 1076c3d0226b4fdb268b2ae0626a13ce 158 Pfam PF13565 Homeodomain-like domain 65 145 2.7E-12 T 22-04-2016 SRM_RS03855 1076c3d0226b4fdb268b2ae0626a13ce 158 SUPERFAMILY SSF46689 18 147 4.24E-9 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 SRM_RS09220 97d04581c592076258a05fce56fefc65 269 Pfam PF11249 Protein of unknown function (DUF3047) 50 250 1.3E-69 T 22-04-2016 IPR021409 Protein of unknown function DUF3047 SRM_RS12955 a2cc8df7bc3241877de594362b911323 236 Pfam PF09972 Predicted membrane protein (DUF2207) 31 210 3.2E-9 T 22-04-2016 IPR018702 Protein of unknown function DUF2207, membrane SRM_RS11490 6956df7ebcf181277f26c206c702198a 433 Pfam PF08013 Tagatose 6 phosphate kinase 40 394 4.6E-29 T 22-04-2016 IPR012062 D-tagatose-bisphosphate aldolase, non-catalytic subunit GatZ/KbaZ GO:0019402 UniPathway: UPA00704 SRM_RS11490 6956df7ebcf181277f26c206c702198a 433 SUPERFAMILY SSF51569 40 415 2.56E-84 T 22-04-2016 SRM_RS11490 6956df7ebcf181277f26c206c702198a 433 Gene3D G3DSA:3.20.20.70 40 312 1.6E-59 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 SRM_RS03660 f78f3b98fb17de1b7c60c5090ba9d1dd 277 Pfam PF04250 Protein of unknown function (DUF429) 43 261 1.7E-48 T 22-04-2016 IPR007362 Protein of unknown function DUF429 SRM_RS14250 05742e5c8f730cf37f77edd7c93ae798 377 PANTHER PTHR23501 6 377 9.3E-36 T 22-04-2016 SRM_RS14250 05742e5c8f730cf37f77edd7c93ae798 377 Gene3D G3DSA:1.20.1250.20 187 360 2.5E-23 T 22-04-2016 SRM_RS14250 05742e5c8f730cf37f77edd7c93ae798 377 SUPERFAMILY SSF103473 3 366 1.09E-58 T 22-04-2016 IPR020846 Major facilitator superfamily domain SRM_RS14250 05742e5c8f730cf37f77edd7c93ae798 377 Pfam PF07690 Major Facilitator Superfamily 3 223 1.5E-30 T 22-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 SRM_RS14250 05742e5c8f730cf37f77edd7c93ae798 377 Gene3D G3DSA:1.20.1250.20 3 170 4.7E-25 T 22-04-2016 SRM_RS01905 826fcb71a4239f86f45565ac82c0d457 277 Pfam PF00685 Sulfotransferase domain 12 228 4.2E-12 T 22-04-2016 IPR000863 Sulfotransferase domain GO:0008146 SRM_RS01905 826fcb71a4239f86f45565ac82c0d457 277 Gene3D G3DSA:3.40.50.300 1 223 4.7E-32 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SRM_RS01905 826fcb71a4239f86f45565ac82c0d457 277 SUPERFAMILY SSF52540 1 219 9.49E-31 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SRM_RS14660 2f888254ae846e02d0de33e2a8340d44 242 TIGRFAM TIGR03170 flgA_cterm: flagella basal body P-ring formation protein FlgA 101 237 3.7E-16 T 22-04-2016 IPR017585 Flagella basal body P-ring formation protein FlgA, C-terminal SRM_RS14660 2f888254ae846e02d0de33e2a8340d44 242 Pfam PF13144 Chaperone for flagella basal body P-ring formation 32 236 6.0E-15 T 22-04-2016 IPR017585 Flagella basal body P-ring formation protein FlgA, C-terminal SRM_RS06390 c8445a8b5fd1e982c4254428b5f8b45a 478 PANTHER PTHR11819 2 472 1.2E-54 T 22-04-2016 IPR001734 Sodium/solute symporter GO:0005215|GO:0006810|GO:0016020|GO:0055085 SRM_RS06390 c8445a8b5fd1e982c4254428b5f8b45a 478 ProSitePatterns PS00456 Sodium:solute symporter family signature 1. 158 183 - T 22-04-2016 IPR018212 Sodium/solute symporter, conserved site GO:0005215|GO:0006810|GO:0016020 SRM_RS06390 c8445a8b5fd1e982c4254428b5f8b45a 478 Pfam PF00474 Sodium:solute symporter family 35 433 5.7E-53 T 22-04-2016 IPR001734 Sodium/solute symporter GO:0005215|GO:0006810|GO:0016020|GO:0055085 SRM_RS14235 52160be22eb9c7b34117dedcfb650c4b 158 Pfam PF06271 RDD family 16 146 5.7E-8 T 22-04-2016 IPR010432 RDD SRM_RS07210 0c6c1fd34ca18945234a94a199fb6e92 282 Pfam PF12679 ABC-2 family transporter protein 73 251 2.6E-6 T 22-04-2016 IPR032688 ABC-2 family transporter protein GO:0006810 SRM_RS13950 ac820728765e643e21198f1b5ede9909 397 Pfam PF04286 Protein of unknown function (DUF445) 122 255 4.0E-16 T 22-04-2016 IPR007383 Protein of unknown function DUF445 SRM_RS13895 68a5c959847b1ee3dca180813f0ee8ba 476 SUPERFAMILY SSF103365 6 476 5.89E-124 T 22-04-2016 IPR001233 tRNA-splicing ligase, RtcB GO:0006396|GO:0008452 SRM_RS13895 68a5c959847b1ee3dca180813f0ee8ba 476 Pfam PF01139 tRNA-splicing ligase RtcB 48 476 3.6E-116 T 22-04-2016 IPR001233 tRNA-splicing ligase, RtcB GO:0006396|GO:0008452 SRM_RS13895 68a5c959847b1ee3dca180813f0ee8ba 476 PANTHER PTHR11118:SF1 5 476 1.5E-163 T 22-04-2016 SRM_RS13895 68a5c959847b1ee3dca180813f0ee8ba 476 PANTHER PTHR11118 5 476 1.5E-163 T 22-04-2016 IPR001233 tRNA-splicing ligase, RtcB GO:0006396|GO:0008452 SRM_RS07600 9ab9d22fe59e050096bf9e6def113b3d 501 Pfam PF04932 O-Antigen ligase 220 350 3.4E-12 T 22-04-2016 IPR007016 O-antigen ligase-related SRM_RS10805 12cb9e8676667a273eb57f1d90b33867 204 Pfam PF00293 NUDIX domain 59 181 8.4E-17 T 22-04-2016 IPR000086 NUDIX hydrolase domain GO:0016787 SRM_RS10805 12cb9e8676667a273eb57f1d90b33867 204 Gene3D G3DSA:3.90.79.10 57 191 2.5E-23 T 22-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 SRM_RS10805 12cb9e8676667a273eb57f1d90b33867 204 SUPERFAMILY SSF55811 56 190 2.98E-25 T 22-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 SRM_RS10805 12cb9e8676667a273eb57f1d90b33867 204 ProSitePatterns PS00893 Nudix box signature. 94 115 - T 22-04-2016 IPR020084 NUDIX hydrolase, conserved site GO:0016787 SRM_RS10805 12cb9e8676667a273eb57f1d90b33867 204 PANTHER PTHR21340 73 196 5.4E-13 T 22-04-2016 SRM_RS01745 4d46ce563c4e5845371c63273bfd137e 138 Pfam PF13586 Transposase DDE domain 49 133 8.6E-19 T 22-04-2016 IPR025668 Transposase DDE domain SRM_RS01745 4d46ce563c4e5845371c63273bfd137e 138 PANTHER PTHR30007 1 130 3.1E-26 T 22-04-2016 SRM_RS01745 4d46ce563c4e5845371c63273bfd137e 138 PANTHER PTHR30007:SF22 1 130 3.1E-26 T 22-04-2016 SRM_RS05865 256017a81cde0b29176001fd2b4eb27a 492 Pfam PF13460 NAD(P)H-binding 15 159 1.7E-8 T 22-04-2016 IPR016040 NAD(P)-binding domain SRM_RS05865 256017a81cde0b29176001fd2b4eb27a 492 Gene3D G3DSA:3.40.50.720 7 242 4.0E-28 T 22-04-2016 IPR016040 NAD(P)-binding domain SRM_RS05865 256017a81cde0b29176001fd2b4eb27a 492 SUPERFAMILY SSF51735 5 283 4.77E-36 T 22-04-2016 IPR016040 NAD(P)-binding domain SRM_RS05865 256017a81cde0b29176001fd2b4eb27a 492 PANTHER PTHR10366:SF401 10 289 5.3E-53 T 22-04-2016 SRM_RS05865 256017a81cde0b29176001fd2b4eb27a 492 PANTHER PTHR10366 10 289 5.3E-53 T 22-04-2016 SRM_RS01370 22be4b4a1046e23885b5d223924148aa 539 PANTHER PTHR11365 1 372 4.2E-197 T 22-04-2016 SRM_RS01370 22be4b4a1046e23885b5d223924148aa 539 PANTHER PTHR11365 390 538 4.2E-197 T 22-04-2016 SRM_RS01370 22be4b4a1046e23885b5d223924148aa 539 Pfam PF02538 Hydantoinase B/oxoprolinase 5 533 3.6E-196 T 22-04-2016 IPR003692 Hydantoinase B/oxoprolinase GO:0003824 SRM_RS12785 abaf4da719e9c13b88ad874afbb9049b 542 PANTHER PTHR16254 1 541 3.2E-111 T 22-04-2016 SRM_RS12785 abaf4da719e9c13b88ad874afbb9049b 542 Pfam PF00999 Sodium/hydrogen exchanger family 13 371 4.2E-59 T 22-04-2016 IPR006153 Cation/H+ exchanger GO:0006812|GO:0015299|GO:0016021|GO:0055085 SRM_RS12785 abaf4da719e9c13b88ad874afbb9049b 542 Gene3D G3DSA:3.40.50.720 406 535 5.0E-20 T 22-04-2016 IPR016040 NAD(P)-binding domain SRM_RS12785 abaf4da719e9c13b88ad874afbb9049b 542 Pfam PF02254 TrkA-N domain 413 522 6.7E-13 T 22-04-2016 IPR003148 Regulator of K+ conductance, N-terminal GO:0006813 SRM_RS12785 abaf4da719e9c13b88ad874afbb9049b 542 SUPERFAMILY SSF51735 409 537 8.18E-17 T 22-04-2016 IPR016040 NAD(P)-binding domain SRM_RS07985 bc02a765e7b2f61aa3c937eb7aa72434 310 SUPERFAMILY SSF103481 56 138 7.06E-5 T 22-04-2016 SRM_RS07985 bc02a765e7b2f61aa3c937eb7aa72434 310 SUPERFAMILY SSF103481 214 308 8.5E-7 T 22-04-2016 SRM_RS07910 ff542a77875561bc91b818cc28d65e2a 238 Gene3D G3DSA:3.40.50.300 7 230 7.1E-69 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SRM_RS07910 ff542a77875561bc91b818cc28d65e2a 238 SUPERFAMILY SSF52540 8 229 9.58E-69 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SRM_RS07910 ff542a77875561bc91b818cc28d65e2a 238 Pfam PF00005 ABC transporter 28 176 9.6E-34 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 SRM_RS07910 ff542a77875561bc91b818cc28d65e2a 238 ProSitePatterns PS00211 ABC transporters family signature. 149 163 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 SRM_RS07910 ff542a77875561bc91b818cc28d65e2a 238 PANTHER PTHR24220:SF430 10 229 1.5E-99 T 22-04-2016 SRM_RS07910 ff542a77875561bc91b818cc28d65e2a 238 PANTHER PTHR24220 10 229 1.5E-99 T 22-04-2016 SRM_RS07910 ff542a77875561bc91b818cc28d65e2a 238 SMART SM00382 37 225 8.3E-13 T 22-04-2016 IPR003593 AAA+ ATPase domain SRM_RS16070 632e35b160e06ac2ab0435da19f20870 267 Pfam PF08547 Complex I intermediate-associated protein 30 (CIA30) 110 257 2.7E-33 T 22-04-2016 IPR013857 NADH:ubiquinone oxidoreductase intermediate-associated protein 30 SRM_RS16070 632e35b160e06ac2ab0435da19f20870 267 PANTHER PTHR13194 103 265 1.6E-28 T 22-04-2016 SRM_RS16070 632e35b160e06ac2ab0435da19f20870 267 SUPERFAMILY SSF49785 105 261 1.79E-23 T 22-04-2016 IPR008979 Galactose-binding domain-like SRM_RS04400 a7b91c4b18e2d986c8c2a4d5201df4bb 75 SUPERFAMILY SSF88723 4 58 5.23E-5 T 22-04-2016 IPR029060 PIN domain-like SRM_RS04400 a7b91c4b18e2d986c8c2a4d5201df4bb 75 Pfam PF01850 PIN domain 8 57 2.2E-5 T 22-04-2016 IPR002716 PIN domain SRM_RS09790 70d78d2a5713042e9da98d88486dc8b8 120 TIGRFAM TIGR04354 amphi-Trp: amphi-Trp domain 33 103 3.8E-18 T 22-04-2016 IPR027598 Amphi-Trp domain SRM_RS15140 a787e5987b7f738e34c6108b384adbec 136 PANTHER PTHR12418 11 129 7.8E-50 T 22-04-2016 SRM_RS15140 a787e5987b7f738e34c6108b384adbec 136 PANTHER PTHR12418:SF33 11 129 7.8E-50 T 22-04-2016 SRM_RS15140 a787e5987b7f738e34c6108b384adbec 136 Gene3D G3DSA:3.10.129.10 9 130 8.4E-49 T 22-04-2016 IPR029069 HotDog domain SRM_RS15140 a787e5987b7f738e34c6108b384adbec 136 TIGRFAM TIGR00369 unchar_dom_1: uncharacterized domain 1 12 125 1.3E-38 T 22-04-2016 IPR003736 Phenylacetic acid degradation-related domain SRM_RS15140 a787e5987b7f738e34c6108b384adbec 136 Pfam PF03061 Thioesterase superfamily 41 118 9.6E-20 T 22-04-2016 IPR006683 Thioesterase domain SRM_RS15140 a787e5987b7f738e34c6108b384adbec 136 SUPERFAMILY SSF54637 10 129 4.49E-33 T 22-04-2016 IPR029069 HotDog domain SRM_RS05675 141aa84f4485d0ae0dbf81877461c921 397 Gene3D G3DSA:2.40.160.60 40 168 2.8E-6 T 22-04-2016 SRM_RS05675 141aa84f4485d0ae0dbf81877461c921 397 SUPERFAMILY SSF56935 38 194 1.19E-8 T 22-04-2016 SRM_RS10895 e5259943df26ac21c6ce3b2ddaa4f463 219 PANTHER PTHR11727 40 155 5.8E-19 T 22-04-2016 IPR001737 Ribosomal RNA adenine methyltransferase KsgA/Erm SRM_RS10895 e5259943df26ac21c6ce3b2ddaa4f463 219 PANTHER PTHR11727:SF14 40 155 5.8E-19 T 22-04-2016 SRM_RS10895 e5259943df26ac21c6ce3b2ddaa4f463 219 SUPERFAMILY SSF53335 53 192 9.96E-19 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SRM_RS10895 e5259943df26ac21c6ce3b2ddaa4f463 219 Gene3D G3DSA:3.40.50.150 59 197 1.0E-13 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SRM_RS10895 e5259943df26ac21c6ce3b2ddaa4f463 219 Pfam PF00398 Ribosomal RNA adenine dimethylase 38 127 1.9E-6 T 22-04-2016 IPR001737 Ribosomal RNA adenine methyltransferase KsgA/Erm SRM_RS15900 358aca938614abe0dccc733b8d1da102 73 Pfam PF08808 RES domain 6 54 9.2E-12 T 22-04-2016 IPR014914 RES domain SRM_RS05915 2cd06e44cf1fc42dcb1843eebfb1e036 580 SUPERFAMILY SSF56954 29 140 1.06E-79 T 22-04-2016 SRM_RS05915 2cd06e44cf1fc42dcb1843eebfb1e036 580 SUPERFAMILY SSF56954 199 565 1.06E-79 T 22-04-2016 SRM_RS05915 2cd06e44cf1fc42dcb1843eebfb1e036 580 Gene3D G3DSA:1.20.1600.10 199 564 1.2E-72 T 22-04-2016 SRM_RS05915 2cd06e44cf1fc42dcb1843eebfb1e036 580 Gene3D G3DSA:1.20.1600.10 79 140 1.2E-72 T 22-04-2016 SRM_RS05915 2cd06e44cf1fc42dcb1843eebfb1e036 580 Pfam PF02321 Outer membrane efflux protein 85 329 7.9E-25 T 22-04-2016 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 SRM_RS05915 2cd06e44cf1fc42dcb1843eebfb1e036 580 Pfam PF02321 Outer membrane efflux protein 356 563 4.1E-32 T 22-04-2016 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 SRM_RS05915 2cd06e44cf1fc42dcb1843eebfb1e036 580 PANTHER PTHR30203 189 411 3.5E-43 T 22-04-2016 SRM_RS05915 2cd06e44cf1fc42dcb1843eebfb1e036 580 PANTHER PTHR30203 429 563 3.5E-43 T 22-04-2016 SRM_RS05915 2cd06e44cf1fc42dcb1843eebfb1e036 580 PANTHER PTHR30203 6 137 3.5E-43 T 22-04-2016 SRM_RS01605 cd8964fe5232aba7f5d14c55ae9e7917 192 PANTHER PTHR10681 14 178 2.0E-14 T 22-04-2016 SRM_RS01605 cd8964fe5232aba7f5d14c55ae9e7917 192 Pfam PF00578 AhpC/TSA family 42 172 5.9E-13 T 22-04-2016 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15 SRM_RS01605 cd8964fe5232aba7f5d14c55ae9e7917 192 SUPERFAMILY SSF52833 13 182 2.01E-23 T 22-04-2016 IPR012336 Thioredoxin-like fold SRM_RS01605 cd8964fe5232aba7f5d14c55ae9e7917 192 PANTHER PTHR10681:SF68 14 178 2.0E-14 T 22-04-2016 SRM_RS01605 cd8964fe5232aba7f5d14c55ae9e7917 192 Gene3D G3DSA:3.40.30.10 40 188 4.0E-32 T 22-04-2016 IPR012336 Thioredoxin-like fold SRM_RS12950 a32da4c8df871f47edef062b1fd99f5f 289 Pfam PF09972 Predicted membrane protein (DUF2207) 9 181 4.8E-13 T 22-04-2016 IPR018702 Protein of unknown function DUF2207, membrane SRM_RS06260 8f263ebc3b6f466bdb6883d7c6fe3ec5 214 SUPERFAMILY SSF51735 1 202 4.37E-42 T 22-04-2016 IPR016040 NAD(P)-binding domain SRM_RS06260 8f263ebc3b6f466bdb6883d7c6fe3ec5 214 Pfam PF13460 NAD(P)H-binding 7 190 7.3E-42 T 22-04-2016 IPR016040 NAD(P)-binding domain SRM_RS06260 8f263ebc3b6f466bdb6883d7c6fe3ec5 214 Gene3D G3DSA:3.40.50.720 1 204 5.3E-50 T 22-04-2016 IPR016040 NAD(P)-binding domain SRM_RS05385 1e332d816174ff36f65d05f41d4d1423 334 PANTHER PTHR10366:SF124 288 327 4.9E-62 T 22-04-2016 SRM_RS05385 1e332d816174ff36f65d05f41d4d1423 334 PANTHER PTHR10366:SF124 6 264 4.9E-62 T 22-04-2016 SRM_RS05385 1e332d816174ff36f65d05f41d4d1423 334 PANTHER PTHR10366 288 327 4.9E-62 T 22-04-2016 SRM_RS05385 1e332d816174ff36f65d05f41d4d1423 334 PANTHER PTHR10366 6 264 4.9E-62 T 22-04-2016 SRM_RS05385 1e332d816174ff36f65d05f41d4d1423 334 SUPERFAMILY SSF51735 4 324 2.76E-62 T 22-04-2016 IPR016040 NAD(P)-binding domain SRM_RS05385 1e332d816174ff36f65d05f41d4d1423 334 Gene3D G3DSA:3.40.50.720 7 323 1.6E-57 T 22-04-2016 IPR016040 NAD(P)-binding domain SRM_RS05385 1e332d816174ff36f65d05f41d4d1423 334 Pfam PF01370 NAD dependent epimerase/dehydratase family 7 235 1.3E-28 T 22-04-2016 IPR001509 NAD-dependent epimerase/dehydratase, N-terminal domain GO:0003824|GO:0050662 SRM_RS10710 8aedf0fee7f344f52f4c418a1ca86042 197 Pfam PF02674 Colicin V production protein 5 146 6.4E-23 T 22-04-2016 IPR003825 Colicin V production, CvpA GO:0009403|GO:0016020 SRM_RS00830 3ce7e749afda9707084b0a2de3f9f8ce 273 Pfam PF02679 (2R)-phospho-3-sulfolactate synthase (ComA) 13 248 1.9E-81 T 22-04-2016 IPR003830 (2R)-phospho-3-sulpholactate synthase, ComA KEGG: 00680+4.4.1.19 SRM_RS00830 3ce7e749afda9707084b0a2de3f9f8ce 273 SUPERFAMILY SSF102110 8 250 3.14E-82 T 22-04-2016 IPR003830 (2R)-phospho-3-sulpholactate synthase, ComA KEGG: 00680+4.4.1.19 SRM_RS00830 3ce7e749afda9707084b0a2de3f9f8ce 273 Gene3D G3DSA:3.20.20.70 11 251 3.2E-78 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 SRM_RS12460 838079dc05f2bc7b0ec063423810ac28 106 Pfam PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch 5 88 1.2E-32 T 22-04-2016 IPR024605 NAD(P) transhydrogenase, alpha subunit, C-terminal KEGG: 00760+1.6.1.2 SRM_RS12460 838079dc05f2bc7b0ec063423810ac28 106 PANTHER PTHR10160 2 86 1.8E-18 T 22-04-2016 SRM_RS00200 3334dd8485c483a003ddd97b34718dbb 109 SUPERFAMILY SSF51735 1 108 1.34E-30 T 22-04-2016 IPR016040 NAD(P)-binding domain SRM_RS00200 3334dd8485c483a003ddd97b34718dbb 109 PANTHER PTHR24322 31 105 3.5E-25 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SRM_RS00200 3334dd8485c483a003ddd97b34718dbb 109 Pfam PF00106 short chain dehydrogenase 1 108 4.8E-26 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SRM_RS00200 3334dd8485c483a003ddd97b34718dbb 109 Gene3D G3DSA:3.40.50.720 1 108 2.4E-32 T 22-04-2016 IPR016040 NAD(P)-binding domain SRM_RS00200 3334dd8485c483a003ddd97b34718dbb 109 PANTHER PTHR24322 1 12 3.5E-25 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SRM_RS00200 3334dd8485c483a003ddd97b34718dbb 109 PANTHER PTHR24322:SF328 31 105 3.5E-25 T 22-04-2016 SRM_RS00200 3334dd8485c483a003ddd97b34718dbb 109 PANTHER PTHR24322:SF328 1 12 3.5E-25 T 22-04-2016 SRM_RS13595 300e0914c269da8f02b8388f86ca2513 239 Pfam PF04519 Polymer-forming cytoskeletal 22 118 7.9E-21 T 22-04-2016 IPR007607 Protein of unknown function DUF583 SRM_RS13595 300e0914c269da8f02b8388f86ca2513 239 PANTHER PTHR35024 22 153 3.9E-18 T 22-04-2016 SRM_RS10870 bcab59791f6835414f96f0f49568c1d2 127 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 15 84 8.7E-8 T 22-04-2016 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 SRM_RS10870 bcab59791f6835414f96f0f49568c1d2 127 Gene3D G3DSA:3.10.20.30 15 89 2.5E-16 T 22-04-2016 IPR012675 Beta-grasp domain SRM_RS10870 bcab59791f6835414f96f0f49568c1d2 127 SUPERFAMILY SSF54292 15 92 1.03E-16 T 22-04-2016 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 SRM_RS04485 8d140b08a427f80fd26b561d30f98002 76 Pfam PF03683 Uncharacterised protein family (UPF0175) 15 72 8.0E-12 T 22-04-2016 IPR005368 Uncharacterised protein family UPF0175 SRM_RS06590 95b77ba80cc391541483cf50a1e560d7 134 SUPERFAMILY SSF53137 24 134 4.8E-46 T 22-04-2016 SRM_RS06590 95b77ba80cc391541483cf50a1e560d7 134 TIGRFAM TIGR03632 uS11_bact: ribosomal protein uS11 16 131 1.0E-54 T 22-04-2016 IPR019981 Ribosomal protein S11, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 SRM_RS06590 95b77ba80cc391541483cf50a1e560d7 134 Hamap MF_01310 30S ribosomal protein S11 [rpsK]. 10 134 32.098 T 22-04-2016 IPR001971 Ribosomal protein S11 GO:0003735|GO:0005840|GO:0006412 SRM_RS06590 95b77ba80cc391541483cf50a1e560d7 134 Gene3D G3DSA:3.30.420.80 15 134 5.7E-51 T 22-04-2016 IPR001971 Ribosomal protein S11 GO:0003735|GO:0005840|GO:0006412 SRM_RS06590 95b77ba80cc391541483cf50a1e560d7 134 PANTHER PTHR11759 23 134 3.7E-58 T 22-04-2016 IPR001971 Ribosomal protein S11 GO:0003735|GO:0005840|GO:0006412 SRM_RS06590 95b77ba80cc391541483cf50a1e560d7 134 Pfam PF00411 Ribosomal protein S11 24 133 5.7E-45 T 22-04-2016 IPR001971 Ribosomal protein S11 GO:0003735|GO:0005840|GO:0006412 SRM_RS06590 95b77ba80cc391541483cf50a1e560d7 134 PIRSF PIRSF002131 5 134 5.1E-50 T 22-04-2016 IPR001971 Ribosomal protein S11 GO:0003735|GO:0005840|GO:0006412 SRM_RS06590 95b77ba80cc391541483cf50a1e560d7 134 ProSitePatterns PS00054 Ribosomal protein S11 signature. 102 124 - T 22-04-2016 IPR018102 Ribosomal S11, conserved site SRM_RS06545 f7a8b90c6373bf99ee61a437b04fc7d7 133 ProSitePatterns PS00053 Ribosomal protein S8 signature. 103 120 - T 22-04-2016 IPR000630 Ribosomal protein S8 GO:0003735|GO:0005840|GO:0006412 SRM_RS06545 f7a8b90c6373bf99ee61a437b04fc7d7 133 Gene3D G3DSA:3.30.1490.10 77 133 1.3E-26 T 22-04-2016 SRM_RS06545 f7a8b90c6373bf99ee61a437b04fc7d7 133 Hamap MF_01302_B 30S ribosomal protein S8 [rpsH]. 3 133 28.887 T 22-04-2016 IPR000630 Ribosomal protein S8 GO:0003735|GO:0005840|GO:0006412 SRM_RS06545 f7a8b90c6373bf99ee61a437b04fc7d7 133 Gene3D G3DSA:3.30.1370.30 5 69 5.6E-21 T 22-04-2016 SRM_RS06545 f7a8b90c6373bf99ee61a437b04fc7d7 133 Pfam PF00410 Ribosomal protein S8 6 133 8.0E-45 T 22-04-2016 IPR000630 Ribosomal protein S8 GO:0003735|GO:0005840|GO:0006412 SRM_RS06545 f7a8b90c6373bf99ee61a437b04fc7d7 133 SUPERFAMILY SSF56047 5 133 1.31E-41 T 22-04-2016 IPR000630 Ribosomal protein S8 GO:0003735|GO:0005840|GO:0006412 SRM_RS01790 d610d8aa1fe4fada08eab30cf6c7f6c2 99 Pfam PF01402 Ribbon-helix-helix protein, copG family 5 40 2.9E-5 T 22-04-2016 IPR002145 Ribbon-helix-helix protein, CopG GO:0006355 SRM_RS01790 d610d8aa1fe4fada08eab30cf6c7f6c2 99 SUPERFAMILY SSF47598 3 41 1.73E-6 T 22-04-2016 IPR010985 Ribbon-helix-helix GO:0006355 SRM_RS02275 45109cd8764a1f959baca55fe7136fb9 156 Pfam PF13847 Methyltransferase domain 9 72 3.2E-11 T 22-04-2016 IPR025714 Methyltransferase domain SRM_RS02275 45109cd8764a1f959baca55fe7136fb9 156 Gene3D G3DSA:3.40.50.150 1 119 9.7E-24 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SRM_RS02275 45109cd8764a1f959baca55fe7136fb9 156 PANTHER PTHR13610:SF9 1 154 1.2E-48 T 22-04-2016 SRM_RS02275 45109cd8764a1f959baca55fe7136fb9 156 SUPERFAMILY SSF53335 1 110 1.51E-28 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SRM_RS02275 45109cd8764a1f959baca55fe7136fb9 156 PANTHER PTHR13610 1 154 1.2E-48 T 22-04-2016 IPR026170 FAM173 family SRM_RS04200 1aafc65af054ea05474d942c90afe5a4 150 Pfam PF12728 Helix-turn-helix domain 80 129 3.6E-11 T 22-04-2016 SRM_RS04200 1aafc65af054ea05474d942c90afe5a4 150 TIGRFAM TIGR01764 excise: DNA binding domain, excisionase family 80 126 1.7E-17 T 22-04-2016 IPR010093 SinI-like, DNA-binding domain GO:0003677 SRM_RS03885 a8affebab3cf518fcbda15b41503242c 120 PIRSF PIRSF020217 1 120 4.8E-36 T 22-04-2016 IPR024700 Uncharacterised conserved protein, UCP020217 SRM_RS03885 a8affebab3cf518fcbda15b41503242c 120 SUPERFAMILY SSF81301 26 119 3.66E-6 T 22-04-2016 SRM_RS03885 a8affebab3cf518fcbda15b41503242c 120 Gene3D G3DSA:3.30.460.10 29 119 8.2E-9 T 22-04-2016 SRM_RS09525 07b3d04030a721fb5ed651c32735685b 363 Pfam PF01594 Domain of unknown function DUF20 36 347 1.3E-46 T 22-04-2016 IPR002549 Transmembrane protein TqsA-like SRM_RS09525 07b3d04030a721fb5ed651c32735685b 363 PANTHER PTHR21716:SF7 36 356 4.6E-67 T 22-04-2016 SRM_RS09525 07b3d04030a721fb5ed651c32735685b 363 PANTHER PTHR21716 36 356 4.6E-67 T 22-04-2016 IPR002549 Transmembrane protein TqsA-like SRM_RS09495 19c98939aa03d0554532f8330b953af8 187 TIGRFAM TIGR03692 ATP_dep_HslV: ATP-dependent protease HslVU, peptidase subunit 11 181 8.8E-80 T 22-04-2016 IPR022281 ATP-dependent protease, HslV subunit GO:0004298|GO:0006508|GO:0009376 SRM_RS09495 19c98939aa03d0554532f8330b953af8 187 PANTHER PTHR32194 9 187 7.3E-103 T 22-04-2016 SRM_RS09495 19c98939aa03d0554532f8330b953af8 187 Pfam PF00227 Proteasome subunit 9 179 1.4E-23 T 22-04-2016 IPR001353 Proteasome, subunit alpha/beta GO:0004298|GO:0005839|GO:0051603 Reactome: REACT_11045|Reactome: REACT_13|Reactome: REACT_13635|Reactome: REACT_152|Reactome: REACT_1538|Reactome: REACT_383|Reactome: REACT_578|Reactome: REACT_6185|Reactome: REACT_6850 SRM_RS09495 19c98939aa03d0554532f8330b953af8 187 SUPERFAMILY SSF56235 8 182 2.85E-55 T 22-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal SRM_RS09495 19c98939aa03d0554532f8330b953af8 187 Gene3D G3DSA:3.60.20.10 11 183 3.0E-75 T 22-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal SRM_RS09495 19c98939aa03d0554532f8330b953af8 187 PIRSF PIRSF039093 4 185 1.0E-88 T 22-04-2016 IPR022281 ATP-dependent protease, HslV subunit GO:0004298|GO:0006508|GO:0009376 SRM_RS09495 19c98939aa03d0554532f8330b953af8 187 Hamap MF_00248 ATP-dependent protease subunit HslV [hslV]. 10 182 38.713 T 22-04-2016 IPR022281 ATP-dependent protease, HslV subunit GO:0004298|GO:0006508|GO:0009376 SRM_RS01125 9d415f2f89f6bd7fb866faa05bead954 130 Gene3D G3DSA:3.40.50.1010 1 128 1.4E-29 T 22-04-2016 IPR029060 PIN domain-like SRM_RS01125 9d415f2f89f6bd7fb866faa05bead954 130 Pfam PF01850 PIN domain 3 121 3.0E-13 T 22-04-2016 IPR002716 PIN domain SRM_RS01125 9d415f2f89f6bd7fb866faa05bead954 130 SUPERFAMILY SSF88723 2 122 1.57E-20 T 22-04-2016 IPR029060 PIN domain-like SRM_RS03965 9c152f198b66f1eae161993c5c72343e 248 Pfam PF02348 Cytidylyltransferase 1 110 1.2E-9 T 22-04-2016 IPR003329 Acylneuraminate cytidylyltransferase KEGG: 00540+2.7.7.38|MetaCyc: PWY-1269|UniPathway: UPA00030|UniPathway: UPA00358 SRM_RS03965 9c152f198b66f1eae161993c5c72343e 248 SUPERFAMILY SSF53448 1 185 3.52E-20 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases SRM_RS03965 9c152f198b66f1eae161993c5c72343e 248 Gene3D G3DSA:3.90.550.10 1 184 2.5E-19 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases SRM_RS14695 318165e32c40cc15841897e2e61bf6aa 187 Pfam PF04390 Lipopolysaccharide-assembly 28 181 3.4E-16 T 22-04-2016 IPR007485 LPS-assembly lipoprotein LptE GO:0019867|GO:0043165 SRM_RS06150 ad6141dfaf9427ec05e63a0dc46ad263 109 Pfam PF01713 Smr domain 15 70 1.3E-8 T 22-04-2016 IPR002625 Smr domain SRM_RS06150 ad6141dfaf9427ec05e63a0dc46ad263 109 SUPERFAMILY SSF160443 14 72 1.31E-8 T 22-04-2016 IPR002625 Smr domain SRM_RS05150 aa690b32213044f8790655a82cb0e50e 986 PANTHER PTHR30189 838 924 4.2E-12 T 22-04-2016 SRM_RS05150 aa690b32213044f8790655a82cb0e50e 986 PANTHER PTHR30189 174 489 4.2E-12 T 22-04-2016 SRM_RS05150 aa690b32213044f8790655a82cb0e50e 986 PANTHER PTHR30189 562 807 4.2E-12 T 22-04-2016 SRM_RS11910 f09088d8b17ca6bed67ce3012bff40ab 233 PANTHER PTHR11403:SF6 1 145 1.1E-84 T 22-04-2016 SRM_RS11910 f09088d8b17ca6bed67ce3012bff40ab 233 PANTHER PTHR11403:SF6 164 233 1.1E-84 T 22-04-2016 SRM_RS11910 f09088d8b17ca6bed67ce3012bff40ab 233 Gene3D G3DSA:1.20.120.80 34 233 7.4E-55 T 22-04-2016 IPR013833 Cytochrome c oxidase, subunit III, 4-helical bundle GO:0004129|GO:0016020|GO:0022904 SRM_RS11910 f09088d8b17ca6bed67ce3012bff40ab 233 PANTHER PTHR11403 1 145 1.1E-84 T 22-04-2016 IPR024791 Cytochrome c oxidase subunit III GO:0015002|GO:0016020|GO:0019646 SRM_RS11910 f09088d8b17ca6bed67ce3012bff40ab 233 PANTHER PTHR11403 164 233 1.1E-84 T 22-04-2016 IPR024791 Cytochrome c oxidase subunit III GO:0015002|GO:0016020|GO:0019646 SRM_RS11910 f09088d8b17ca6bed67ce3012bff40ab 233 Pfam PF00510 Cytochrome c oxidase subunit III 167 231 1.4E-10 T 22-04-2016 IPR000298 Cytochrome c oxidase subunit III domain GO:0015002|GO:0016020 SRM_RS11910 f09088d8b17ca6bed67ce3012bff40ab 233 Pfam PF00510 Cytochrome c oxidase subunit III 37 157 1.9E-8 T 22-04-2016 IPR000298 Cytochrome c oxidase subunit III domain GO:0015002|GO:0016020 SRM_RS11910 f09088d8b17ca6bed67ce3012bff40ab 233 SUPERFAMILY SSF81452 32 232 1.2E-51 T 22-04-2016 IPR000298 Cytochrome c oxidase subunit III domain GO:0015002|GO:0016020 SRM_RS14025 f82749a4fa330fcee7efea4e23040516 451 Pfam PF01145 SPFH domain / Band 7 family 125 293 3.4E-9 T 22-04-2016 IPR001107 Band 7 domain SRM_RS14025 f82749a4fa330fcee7efea4e23040516 451 SUPERFAMILY SSF117892 162 268 5.1E-5 T 22-04-2016 IPR001107 Band 7 domain SRM_RS12205 d6c0e650a54cf8c7df16714c41507be0 92 SUPERFAMILY SSF50475 8 87 1.1E-12 T 22-04-2016 IPR012349 FMN-binding split barrel GO:0010181|GO:0016491|GO:0055114 UniPathway: UPA00647 SRM_RS12205 d6c0e650a54cf8c7df16714c41507be0 92 Gene3D G3DSA:3.20.180.10 8 89 1.2E-24 T 22-04-2016 IPR019595 Domain of unknown function DUF2470 SRM_RS12205 d6c0e650a54cf8c7df16714c41507be0 92 PANTHER PTHR13343 5 92 6.4E-12 T 22-04-2016 SRM_RS12205 d6c0e650a54cf8c7df16714c41507be0 92 Pfam PF10615 Protein of unknown function (DUF2470) 8 82 1.6E-23 T 22-04-2016 IPR019595 Domain of unknown function DUF2470 SRM_RS11145 0fb0c461b62973eecf329feb3c1a55fd 278 Pfam PF09844 Uncharacterized conserved protein (COG2071) 49 247 8.2E-31 T 22-04-2016 IPR018644 Protein of unknown function DUF2071 SRM_RS11145 0fb0c461b62973eecf329feb3c1a55fd 278 SUPERFAMILY SSF160104 39 139 8.37E-5 T 22-04-2016 SRM_RS00340 dda329324056a7dec6fd25a3ade57e30 62 SUPERFAMILY SSF102110 1 62 2.88E-14 T 22-04-2016 IPR003830 (2R)-phospho-3-sulpholactate synthase, ComA KEGG: 00680+4.4.1.19 SRM_RS00340 dda329324056a7dec6fd25a3ade57e30 62 Pfam PF02679 (2R)-phospho-3-sulfolactate synthase (ComA) 1 62 1.1E-13 T 22-04-2016 IPR003830 (2R)-phospho-3-sulpholactate synthase, ComA KEGG: 00680+4.4.1.19 SRM_RS00340 dda329324056a7dec6fd25a3ade57e30 62 Gene3D G3DSA:3.20.20.70 1 62 1.6E-12 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 SRM_RS10440 61eed55f76eb7496812c661b339ad913 350 PANTHER PTHR10846:SF8 146 344 2.1E-41 T 22-04-2016 SRM_RS10440 61eed55f76eb7496812c661b339ad913 350 PANTHER PTHR10846:SF8 3 126 2.1E-41 T 22-04-2016 SRM_RS10440 61eed55f76eb7496812c661b339ad913 350 Pfam PF01699 Sodium/calcium exchanger protein 10 168 7.6E-21 T 22-04-2016 IPR004837 Sodium/calcium exchanger membrane region GO:0016021|GO:0055085 Reactome: REACT_15518 SRM_RS10440 61eed55f76eb7496812c661b339ad913 350 Pfam PF01699 Sodium/calcium exchanger protein 192 328 1.6E-20 T 22-04-2016 IPR004837 Sodium/calcium exchanger membrane region GO:0016021|GO:0055085 Reactome: REACT_15518 SRM_RS10440 61eed55f76eb7496812c661b339ad913 350 PANTHER PTHR10846 146 344 2.1E-41 T 22-04-2016 IPR004481 Sodium/potassium/calcium exchanger Reactome: REACT_15518 SRM_RS10440 61eed55f76eb7496812c661b339ad913 350 PANTHER PTHR10846 3 126 2.1E-41 T 22-04-2016 IPR004481 Sodium/potassium/calcium exchanger Reactome: REACT_15518 SRM_RS14765 330decb1f6645f0cfd0972ef07d9a80a 594 SUPERFAMILY SSF53649 298 433 6.54E-5 T 22-04-2016 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 SRM_RS14835 9dbc062b91449b7859661e6beb7ce865 191 Pfam PF10652 Protein of unknown function (DUF2480) 2 165 3.4E-66 T 22-04-2016 IPR018914 Protein of unknown function DUF2480 SRM_RS08965 6a5f5c4c959c726cf2b6a60e814b5fbb 487 Gene3D G3DSA:2.130.10.10 155 474 2.3E-7 T 22-04-2016 IPR015943 WD40/YVTN repeat-like-containing domain GO:0005515 SRM_RS08965 6a5f5c4c959c726cf2b6a60e814b5fbb 487 SUPERFAMILY SSF51004 138 466 1.28E-9 T 22-04-2016 IPR011048 Cytochrome cd1-nitrite reductase-like, haem d1 domain SRM_RS12545 50d4a6fc2b754d790767965e285c926e 265 Pfam PF03741 Integral membrane protein TerC family 15 202 1.9E-49 T 22-04-2016 IPR005496 Integral membrane protein TerC GO:0016021 SRM_RS12545 50d4a6fc2b754d790767965e285c926e 265 PANTHER PTHR30060:SF1 1 245 3.4E-111 T 22-04-2016 SRM_RS12545 50d4a6fc2b754d790767965e285c926e 265 PANTHER PTHR30060 1 245 3.4E-111 T 22-04-2016 SRM_RS09655 140979b417f134e9e64144df354a086a 141 Pfam PF14129 Domain of unknown function (DUF4296) 41 113 2.7E-11 T 22-04-2016 IPR025381 Domain of unknown function DUF4296 SRM_RS03470 f0a58937caab1946660610a9dedd89cd 163 Pfam PF00583 Acetyltransferase (GNAT) family 69 128 2.4E-6 T 22-04-2016 IPR000182 GNAT domain GO:0008080 SRM_RS03470 f0a58937caab1946660610a9dedd89cd 163 SUPERFAMILY SSF55729 21 127 2.4E-12 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase SRM_RS03470 f0a58937caab1946660610a9dedd89cd 163 Gene3D G3DSA:3.40.630.30 23 126 4.4E-12 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase SRM_RS07340 2a96991d5cbf5eed18c0e77c738cab85 225 Pfam PF06803 Protein of unknown function (DUF1232) 154 186 5.8E-13 T 22-04-2016 IPR010652 Protein of unknown function DUF1232 UniPathway: UPA00143 SRM_RS09500 ddf188ba2c48381611c4d35eeee29b9c 369 Pfam PF01936 NYN domain 15 160 5.7E-11 T 22-04-2016 IPR021139 NYN domain, limkain-b1-type SRM_RS09500 ddf188ba2c48381611c4d35eeee29b9c 369 Gene3D G3DSA:3.40.50.1010 12 159 3.4E-12 T 22-04-2016 IPR029060 PIN domain-like SRM_RS05695 d16b2cf8c6ad1fdc57efad43ef665cac 151 Pfam PF09832 Uncharacterized protein conserved in bacteria (DUF2059) 83 134 1.2E-11 T 22-04-2016 IPR018637 Domain of unknown function DUF2059 SRM_RS11705 dcf34f61ddbd1eda40d21c40296978db 143 Pfam PF10057 Uncharacterized conserved protein (DUF2294) 24 133 3.2E-34 T 22-04-2016 IPR018745 Domain of unknown function DUF2294 SRM_RS03665 ea8611f20925ecee10465e1051d6cd97 286 Gene3D G3DSA:3.20.20.220 13 281 7.7E-63 T 22-04-2016 IPR029041 FAD-linked oxidoreductase-like SRM_RS03665 ea8611f20925ecee10465e1051d6cd97 286 Pfam PF01619 Proline dehydrogenase 22 279 2.8E-29 T 22-04-2016 IPR002872 Proline dehydrogenase domain KEGG: 00330+1.5.5.2|MetaCyc: PWY-5737|MetaCyc: PWY-6922|UniPathway: UPA00261 SRM_RS03665 ea8611f20925ecee10465e1051d6cd97 286 PIRSF PIRSF000196 2 286 5.6E-100 T 22-04-2016 IPR008219 Proline dehydrogenase GO:0004657|GO:0010133 KEGG: 00330+1.5.5.2|MetaCyc: PWY-5737|MetaCyc: PWY-6922|UniPathway: UPA00261 SRM_RS03665 ea8611f20925ecee10465e1051d6cd97 286 SUPERFAMILY SSF51730 14 283 1.92E-65 T 22-04-2016 IPR029041 FAD-linked oxidoreductase-like SRM_RS04260 86adf79a7775defb2cbeaf1b12c59906 72 Gene3D G3DSA:3.40.50.1010 6 66 1.5E-13 T 22-04-2016 IPR029060 PIN domain-like SRM_RS04260 86adf79a7775defb2cbeaf1b12c59906 72 SUPERFAMILY SSF88723 8 67 1.28E-7 T 22-04-2016 IPR029060 PIN domain-like SRM_RS07470 9ba5db7bf2df2ec763a6ec20a0b96470 307 Gene3D G3DSA:3.20.20.70 5 287 1.1E-67 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 SRM_RS07470 9ba5db7bf2df2ec763a6ec20a0b96470 307 Pfam PF00682 HMGL-like 7 277 1.7E-47 T 22-04-2016 IPR000891 Pyruvate carboxyltransferase GO:0003824 SRM_RS07470 9ba5db7bf2df2ec763a6ec20a0b96470 307 PANTHER PTHR10277:SF1 1 307 1.2E-98 T 22-04-2016 SRM_RS07470 9ba5db7bf2df2ec763a6ec20a0b96470 307 SUPERFAMILY SSF51569 2 289 1.45E-65 T 22-04-2016 SRM_RS07470 9ba5db7bf2df2ec763a6ec20a0b96470 307 PANTHER PTHR10277 1 307 1.2E-98 T 22-04-2016 SRM_RS13705 7e8c37f05d39ecd76f5c93010abefb13 268 Pfam PF03649 Uncharacterised protein family (UPF0014) 19 253 6.4E-56 T 22-04-2016 IPR005226 UPF0014 family SRM_RS13705 7e8c37f05d39ecd76f5c93010abefb13 268 PANTHER PTHR30028 1 263 1.2E-41 T 22-04-2016 SRM_RS13705 7e8c37f05d39ecd76f5c93010abefb13 268 PANTHER PTHR30028:SF0 1 263 1.2E-41 T 22-04-2016 IPR005226 UPF0014 family SRM_RS15890 6af47d63c78c5131610f9b1522d08257 161 PANTHER PTHR33677 47 158 2.0E-28 T 22-04-2016 SRM_RS15890 6af47d63c78c5131610f9b1522d08257 161 Pfam PF02583 Metal-sensitive transcriptional repressor 77 158 2.2E-27 T 22-04-2016 IPR003735 Metal-sensitive transcriptional repressor GO:0003677|GO:0006355|GO:0046872 SRM_RS15890 6af47d63c78c5131610f9b1522d08257 161 PANTHER PTHR33677:SF3 47 158 2.0E-28 T 22-04-2016 SRM_RS12795 35876441abaee3e3bf1a232ce19a6157 736 PANTHER PTHR11785 4 453 2.3E-95 T 22-04-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 SRM_RS12795 35876441abaee3e3bf1a232ce19a6157 736 Pfam PF13520 Amino acid permease 9 393 1.2E-44 T 22-04-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 SRM_RS15940 ed97be185f14e2383eb0f24e4ef0ab87 174 SUPERFAMILY SSF56300 9 149 3.11E-9 T 22-04-2016 IPR029052 Metallo-dependent phosphatase-like SRM_RS15940 ed97be185f14e2383eb0f24e4ef0ab87 174 PANTHER PTHR33987 7 148 2.2E-47 T 22-04-2016 SRM_RS09945 7979368ae6986a626905cca6d0d267fc 269 Pfam PF00805 Pentapeptide repeats (8 copies) 158 195 8.1E-10 T 22-04-2016 IPR001646 Pentapeptide repeat SRM_RS09945 7979368ae6986a626905cca6d0d267fc 269 SUPERFAMILY SSF141571 135 230 4.71E-18 T 22-04-2016 SRM_RS09945 7979368ae6986a626905cca6d0d267fc 269 PANTHER PTHR14136 135 223 6.2E-17 T 22-04-2016 SRM_RS09945 7979368ae6986a626905cca6d0d267fc 269 PANTHER PTHR14136:SF0 135 223 6.2E-17 T 22-04-2016 SRM_RS04245 f487d46eff4b5a9573f7d2130edb1adf 123 Gene3D G3DSA:3.30.460.10 10 113 1.1E-17 T 22-04-2016 SRM_RS04245 f487d46eff4b5a9573f7d2130edb1adf 123 Pfam PF01909 Nucleotidyltransferase domain 18 62 4.8E-7 T 22-04-2016 IPR002934 Polymerase, nucleotidyl transferase domain GO:0016779 SRM_RS04245 f487d46eff4b5a9573f7d2130edb1adf 123 PANTHER PTHR33933 1 113 1.6E-15 T 22-04-2016 SRM_RS04245 f487d46eff4b5a9573f7d2130edb1adf 123 PANTHER PTHR33933:SF1 1 113 1.6E-15 T 22-04-2016 SRM_RS04245 f487d46eff4b5a9573f7d2130edb1adf 123 SUPERFAMILY SSF81301 5 113 5.14E-15 T 22-04-2016 SRM_RS11455 7e66a84edbe3b0e10196c03f1cc2e03d 133 Gene3D G3DSA:2.160.20.10 20 119 1.9E-4 T 22-04-2016 IPR012334 Pectin lyase fold SRM_RS11455 7e66a84edbe3b0e10196c03f1cc2e03d 133 SUPERFAMILY SSF51126 20 121 1.91E-5 T 22-04-2016 IPR011050 Pectin lyase fold/virulence factor SRM_RS11265 e39eeb16532ea3e0ab6a031dc68c224a 215 SUPERFAMILY SSF55811 45 200 2.84E-30 T 22-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 SRM_RS11265 e39eeb16532ea3e0ab6a031dc68c224a 215 Gene3D G3DSA:3.90.79.10 42 207 2.3E-36 T 22-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 SRM_RS11265 e39eeb16532ea3e0ab6a031dc68c224a 215 Pfam PF00293 NUDIX domain 50 135 9.2E-12 T 22-04-2016 IPR000086 NUDIX hydrolase domain GO:0016787 SRM_RS11265 e39eeb16532ea3e0ab6a031dc68c224a 215 PANTHER PTHR12992 48 207 2.8E-42 T 22-04-2016 SRM_RS11265 e39eeb16532ea3e0ab6a031dc68c224a 215 ProSitePatterns PS00893 Nudix box signature. 86 107 - T 22-04-2016 IPR020084 NUDIX hydrolase, conserved site GO:0016787 SRM_RS11470 ac430d0aaca01372ae79bcf6b4116ea3 378 Gene3D G3DSA:2.60.40.670 54 131 2.1E-5 T 22-04-2016 IPR000601 PKD domain SRM_RS11470 ac430d0aaca01372ae79bcf6b4116ea3 378 SUPERFAMILY SSF49299 46 130 1.96E-7 T 22-04-2016 IPR000601 PKD domain SRM_RS04710 d0fb2337449c75d270d1ecf25770588d 94 PANTHER PTHR34310:SF1 1 94 1.0E-40 T 22-04-2016 SRM_RS04710 d0fb2337449c75d270d1ecf25770588d 94 Pfam PF04248 Domain of unknown function (DUF427) 1 87 3.6E-33 T 22-04-2016 IPR007361 Domain of unknown function DUF427 SRM_RS04710 d0fb2337449c75d270d1ecf25770588d 94 PANTHER PTHR34310 1 94 1.0E-40 T 22-04-2016 SRM_RS10760 19cf1189629dc7d76a55f5b65f7578e7 413 TIGRFAM TIGR00216 ispH_lytB: 4-hydroxy-3-methylbut-2-enyl diphosphate reductase 46 389 3.2E-68 T 22-04-2016 IPR003451 4-hydroxy-3-methylbut-2-enyl diphosphate reductase GO:0019288|GO:0046872|GO:0050992|GO:0051745 UniPathway: UPA00056|UniPathway: UPA00059 SRM_RS10760 19cf1189629dc7d76a55f5b65f7578e7 413 Pfam PF02401 LytB protein 46 389 1.5E-76 T 22-04-2016 IPR003451 4-hydroxy-3-methylbut-2-enyl diphosphate reductase GO:0019288|GO:0046872|GO:0050992|GO:0051745 UniPathway: UPA00056|UniPathway: UPA00059 SRM_RS10760 19cf1189629dc7d76a55f5b65f7578e7 413 PANTHER PTHR31619 37 403 1.5E-88 T 22-04-2016 SRM_RS14450 188c7fdcc6bfdcfdd471aaf15672db8a 227 ProSitePatterns PS00922 Prokaryotic transglycosylases signature. 96 124 - T 22-04-2016 IPR000189 Prokaryotic transglycosylase, active site GO:0000270|GO:0008933|GO:0016020 SRM_RS14450 188c7fdcc6bfdcfdd471aaf15672db8a 227 PANTHER PTHR21666 150 227 6.2E-20 T 22-04-2016 SRM_RS14450 188c7fdcc6bfdcfdd471aaf15672db8a 227 PANTHER PTHR21666 52 133 6.2E-20 T 22-04-2016 SRM_RS14450 188c7fdcc6bfdcfdd471aaf15672db8a 227 SUPERFAMILY SSF53955 54 222 1.6E-27 T 22-04-2016 IPR023346 Lysozyme-like domain SRM_RS14450 188c7fdcc6bfdcfdd471aaf15672db8a 227 Gene3D G3DSA:1.10.530.10 87 222 1.1E-29 T 22-04-2016 SRM_RS14450 188c7fdcc6bfdcfdd471aaf15672db8a 227 Pfam PF01464 Transglycosylase SLT domain 87 199 2.1E-17 T 22-04-2016 IPR008258 Transglycosylase SLT domain 1 SRM_RS07565 cf213e5bd61b86b56b8011096b52566e 705 Pfam PF14121 Putative porin 651 705 1.5E-8 T 22-04-2016 IPR025631 Putative porin-10 SRM_RS07565 cf213e5bd61b86b56b8011096b52566e 705 Gene3D G3DSA:2.40.170.20 210 426 1.1E-6 T 22-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 SRM_RS07565 cf213e5bd61b86b56b8011096b52566e 705 SUPERFAMILY SSF56935 92 699 6.87E-14 T 22-04-2016 SRM_RS01105 ea07dd5c45145256a9856b3784644632 148 Gene3D G3DSA:3.10.129.10 4 133 4.7E-38 T 22-04-2016 IPR029069 HotDog domain SRM_RS01105 ea07dd5c45145256a9856b3784644632 148 Pfam PF01575 MaoC like domain 16 116 2.1E-22 T 22-04-2016 IPR002539 MaoC-like domain SRM_RS01105 ea07dd5c45145256a9856b3784644632 148 PANTHER PTHR13078 5 130 9.2E-36 T 22-04-2016 SRM_RS01105 ea07dd5c45145256a9856b3784644632 148 SUPERFAMILY SSF54637 4 141 3.74E-38 T 22-04-2016 IPR029069 HotDog domain SRM_RS14510 5f9db0f73ff14a7152394d7a289cfaba 206 Pfam PF02050 Flagellar FliJ protein 75 195 1.9E-9 T 22-04-2016 IPR012823 Flagellar export FliJ GO:0009288|GO:0071973 SRM_RS12670 dc3a12cc4d4a6f558ed5a9e127538069 334 SUPERFAMILY SSF49329 202 318 6.63E-7 T 22-04-2016 IPR001424 Superoxide dismutase, copper/zinc binding domain GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 SRM_RS12670 dc3a12cc4d4a6f558ed5a9e127538069 334 SUPERFAMILY SSF49329 65 172 9.96E-10 T 22-04-2016 IPR001424 Superoxide dismutase, copper/zinc binding domain GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 SRM_RS03075 d79eaf615d90d37cc19810a6bbf9775d 294 SUPERFAMILY SSF161098 94 278 1.44E-40 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 SRM_RS03075 d79eaf615d90d37cc19810a6bbf9775d 294 PANTHER PTHR30177 1 285 6.9E-119 T 22-04-2016 SRM_RS03075 d79eaf615d90d37cc19810a6bbf9775d 294 Gene3D G3DSA:1.10.3720.10 41 278 7.8E-38 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 SRM_RS03075 d79eaf615d90d37cc19810a6bbf9775d 294 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 117 274 6.6E-27 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 SRM_RS03075 d79eaf615d90d37cc19810a6bbf9775d 294 PANTHER PTHR30177:SF2 1 285 6.9E-119 T 22-04-2016 SRM_RS14900 9b9ddf267306cc62bd96e2aa84e86508 288 Pfam PF03793 PASTA domain 125 188 1.2E-9 T 22-04-2016 IPR005543 PASTA domain SRM_RS14900 9b9ddf267306cc62bd96e2aa84e86508 288 Pfam PF03793 PASTA domain 56 118 4.8E-10 T 22-04-2016 IPR005543 PASTA domain SRM_RS14900 9b9ddf267306cc62bd96e2aa84e86508 288 SMART SM00740 121 188 2.2E-5 T 22-04-2016 IPR005543 PASTA domain SRM_RS14900 9b9ddf267306cc62bd96e2aa84e86508 288 SMART SM00740 52 119 3.0E-8 T 22-04-2016 IPR005543 PASTA domain SRM_RS14900 9b9ddf267306cc62bd96e2aa84e86508 288 SMART SM00740 191 269 26.0 T 22-04-2016 IPR005543 PASTA domain SRM_RS05175 a56a602781c4233fa882134785edf06a 461 Gene3D G3DSA:2.40.160.60 66 410 2.2E-15 T 22-04-2016 SRM_RS07860 d271026c11b5aa6db51e6c8c9339252d 450 SUPERFAMILY SSF63829 94 187 4.05E-7 T 22-04-2016 SRM_RS07860 d271026c11b5aa6db51e6c8c9339252d 450 SUPERFAMILY SSF63829 291 414 4.05E-7 T 22-04-2016 SRM_RS07860 d271026c11b5aa6db51e6c8c9339252d 450 Gene3D G3DSA:2.120.10.30 96 190 6.1E-5 T 22-04-2016 IPR011042 Six-bladed beta-propeller, TolB-like SRM_RS07860 d271026c11b5aa6db51e6c8c9339252d 450 Gene3D G3DSA:2.120.10.30 294 414 6.1E-5 T 22-04-2016 IPR011042 Six-bladed beta-propeller, TolB-like SRM_RS07860 d271026c11b5aa6db51e6c8c9339252d 450 Pfam PF14269 Arylsulfotransferase (ASST) 142 410 1.1E-33 T 22-04-2016 SRM_RS04165 0376f43f300351064a16b1f31f186ae8 165 Pfam PF11848 Domain of unknown function (DUF3368) 120 163 1.1E-7 T 22-04-2016 IPR021799 Protein of unknown function DUF3368 SRM_RS04165 0376f43f300351064a16b1f31f186ae8 165 PANTHER PTHR39550 2 161 8.2E-25 T 22-04-2016 SRM_RS14610 eba936d11f8abab80b97d8258ed1f386 144 Pfam PF03400 IS1 transposase 10 127 6.7E-12 T 22-04-2016 IPR005063 Transposase, IS1 GO:0003677|GO:0004803|GO:0006313 SRM_RS14620 17fe84f88775ca11687d1f1b810e843e 288 SUPERFAMILY SSF52540 3 30 1.71E-42 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SRM_RS14620 17fe84f88775ca11687d1f1b810e843e 288 SUPERFAMILY SSF52540 83 288 1.71E-42 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SRM_RS14620 17fe84f88775ca11687d1f1b810e843e 288 Gene3D G3DSA:3.40.50.300 3 287 2.8E-41 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SRM_RS14620 17fe84f88775ca11687d1f1b810e843e 288 Pfam PF00685 Sulfotransferase domain 3 285 2.1E-26 T 22-04-2016 IPR000863 Sulfotransferase domain GO:0008146 SRM_RS14440 4ac3f8dfa488a8fdc7e154a9bf798c27 224 Gene3D G3DSA:3.40.50.2300 70 187 4.2E-10 T 22-04-2016 SRM_RS14440 4ac3f8dfa488a8fdc7e154a9bf798c27 224 Pfam PF04392 ABC transporter substrate binding protein 62 187 1.4E-10 T 22-04-2016 IPR007487 ABC transporter, substrate-binding protein SRM_RS12930 4bbff80564a9596d8d1225473b6a4677 305 SMART SM00563 83 196 1.0E-34 T 22-04-2016 IPR002123 Phospholipid/glycerol acyltransferase GO:0008152|GO:0016746 SRM_RS12930 4bbff80564a9596d8d1225473b6a4677 305 SUPERFAMILY SSF69593 16 248 8.89E-46 T 22-04-2016 SRM_RS12930 4bbff80564a9596d8d1225473b6a4677 305 Gene3D G3DSA:3.40.1130.10 81 248 2.8E-25 T 22-04-2016 SRM_RS12930 4bbff80564a9596d8d1225473b6a4677 305 PANTHER PTHR10434 3 256 9.2E-55 T 22-04-2016 SRM_RS12930 4bbff80564a9596d8d1225473b6a4677 305 Pfam PF01553 Acyltransferase 80 193 5.7E-25 T 22-04-2016 IPR002123 Phospholipid/glycerol acyltransferase GO:0008152|GO:0016746 SRM_RS10880 289d97d5aae0ef182806205786381248 271 Pfam PF04784 Protein of unknown function, DUF547 74 186 3.6E-27 T 22-04-2016 IPR006869 Domain of unknown function DUF547 SRM_RS11195 0e7c1149143809afa45c01c9cf9e6dad 432 Pfam PF01103 Surface antigen 258 399 1.5E-7 T 22-04-2016 IPR000184 Bacterial surface antigen (D15) GO:0019867 SRM_RS11195 0e7c1149143809afa45c01c9cf9e6dad 432 Gene3D G3DSA:2.40.160.50 269 428 1.1E-15 T 22-04-2016 SRM_RS05930 b090cca6454d8e4b51ba4a9b425ad347 212 SUPERFAMILY SSF48498 67 179 6.23E-10 T 22-04-2016 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal SRM_RS05930 b090cca6454d8e4b51ba4a9b425ad347 212 Gene3D G3DSA:1.10.357.10 2 173 1.4E-8 T 22-04-2016 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 SRM_RS07945 9f769b0b633d774367eae1f002ea4a2e 442 PANTHER PTHR21716 105 436 4.2E-53 T 22-04-2016 IPR002549 Transmembrane protein TqsA-like SRM_RS07945 9f769b0b633d774367eae1f002ea4a2e 442 Pfam PF01594 Domain of unknown function DUF20 105 426 2.5E-51 T 22-04-2016 IPR002549 Transmembrane protein TqsA-like SRM_RS10515 54530b0b0c26f4678aeb6d6dfca56c84 247 Pfam PF04402 Protein of unknown function (DUF541) 33 239 2.2E-46 T 22-04-2016 IPR007497 Protein of unknown function DUF541 SRM_RS10515 54530b0b0c26f4678aeb6d6dfca56c84 247 PANTHER PTHR34387 1 247 8.7E-43 T 22-04-2016 SRM_RS10515 54530b0b0c26f4678aeb6d6dfca56c84 247 PANTHER PTHR34387:SF1 1 247 8.7E-43 T 22-04-2016 SRM_RS01525 c11aaab7aeabaf8a0e158be974d7580a 345 PANTHER PTHR31964 12 171 1.4E-29 T 22-04-2016 SRM_RS01525 c11aaab7aeabaf8a0e158be974d7580a 345 SUPERFAMILY SSF52402 27 169 1.55E-32 T 22-04-2016 SRM_RS01525 c11aaab7aeabaf8a0e158be974d7580a 345 PRINTS PR01438 Universal stress protein signature 27 45 2.5E-17 T 22-04-2016 IPR006015 Universal stress protein A SRM_RS01525 c11aaab7aeabaf8a0e158be974d7580a 345 PRINTS PR01438 Universal stress protein signature 127 139 2.5E-17 T 22-04-2016 IPR006015 Universal stress protein A SRM_RS01525 c11aaab7aeabaf8a0e158be974d7580a 345 PRINTS PR01438 Universal stress protein signature 145 167 2.5E-17 T 22-04-2016 IPR006015 Universal stress protein A SRM_RS01525 c11aaab7aeabaf8a0e158be974d7580a 345 PANTHER PTHR31964:SF26 12 171 1.4E-29 T 22-04-2016 SRM_RS01525 c11aaab7aeabaf8a0e158be974d7580a 345 SUPERFAMILY SSF52402 198 335 1.05E-27 T 22-04-2016 SRM_RS01525 c11aaab7aeabaf8a0e158be974d7580a 345 Gene3D G3DSA:3.40.50.620 192 334 3.7E-29 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold SRM_RS01525 c11aaab7aeabaf8a0e158be974d7580a 345 Gene3D G3DSA:3.40.50.620 17 167 5.5E-35 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold SRM_RS01525 c11aaab7aeabaf8a0e158be974d7580a 345 Pfam PF00582 Universal stress protein family 27 167 1.6E-30 T 22-04-2016 IPR006016 UspA GO:0006950 SRM_RS01525 c11aaab7aeabaf8a0e158be974d7580a 345 Pfam PF00582 Universal stress protein family 198 334 9.9E-23 T 22-04-2016 IPR006016 UspA GO:0006950 SRM_RS10400 c12a9d7ca37b2c2da6a9031d321e9a6c 463 Pfam PF11013 Protein of unknown function (DUF2851) 26 416 2.5E-99 T 22-04-2016 IPR021272 Protein of unknown function DUF2851 SRM_RS05270 c4aab1ff9c39db45c073ca9833a63651 246 Pfam PF13557 Putative MetA-pathway of phenol degradation 32 246 8.9E-20 T 22-04-2016 IPR025737 MetA-pathway of phenol degradation, putative SRM_RS02655 0d0845a18343bc9e3c135ebf6a3cc2f4 255 Gene3D G3DSA:3.40.50.300 3 248 2.4E-64 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SRM_RS02655 0d0845a18343bc9e3c135ebf6a3cc2f4 255 SUPERFAMILY SSF52540 8 248 4.65E-62 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SRM_RS02655 0d0845a18343bc9e3c135ebf6a3cc2f4 255 PANTHER PTHR24220 11 219 4.5E-82 T 22-04-2016 SRM_RS02655 0d0845a18343bc9e3c135ebf6a3cc2f4 255 SMART SM00382 34 223 5.0E-15 T 22-04-2016 IPR003593 AAA+ ATPase domain SRM_RS02655 0d0845a18343bc9e3c135ebf6a3cc2f4 255 Pfam PF00005 ABC transporter 26 174 9.5E-29 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 SRM_RS02655 0d0845a18343bc9e3c135ebf6a3cc2f4 255 ProSitePatterns PS00211 ABC transporters family signature. 146 160 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 SRM_RS02655 0d0845a18343bc9e3c135ebf6a3cc2f4 255 PANTHER PTHR24220:SF483 11 219 4.5E-82 T 22-04-2016 SRM_RS13610 869d609f27c5e45d1affe9810c0517ee 571 Gene3D G3DSA:3.40.720.10 260 485 2.1E-7 T 22-04-2016 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 SRM_RS13610 869d609f27c5e45d1affe9810c0517ee 571 SUPERFAMILY SSF53649 445 485 3.74E-12 T 22-04-2016 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 SRM_RS13610 869d609f27c5e45d1affe9810c0517ee 571 SUPERFAMILY SSF53649 254 416 3.74E-12 T 22-04-2016 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 SRM_RS13610 869d609f27c5e45d1affe9810c0517ee 571 Pfam PF00884 Sulfatase 263 485 1.3E-6 T 22-04-2016 IPR000917 Sulfatase, N-terminal GO:0008152|GO:0008484 SRM_RS15740 7bbec003cae1b03fa1b29870dd53c289 423 PRINTS PR00344 Bacterial sensor protein C-terminal signature 386 399 7.6E-5 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SRM_RS15740 7bbec003cae1b03fa1b29870dd53c289 423 PRINTS PR00344 Bacterial sensor protein C-terminal signature 359 377 7.6E-5 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SRM_RS15740 7bbec003cae1b03fa1b29870dd53c289 423 PRINTS PR00344 Bacterial sensor protein C-terminal signature 338 352 7.6E-5 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SRM_RS15740 7bbec003cae1b03fa1b29870dd53c289 423 SUPERFAMILY SSF55874 258 399 4.32E-17 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SRM_RS15740 7bbec003cae1b03fa1b29870dd53c289 423 Gene3D G3DSA:3.30.565.10 254 402 4.1E-15 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SRM_RS15740 7bbec003cae1b03fa1b29870dd53c289 423 SMART SM00387 297 402 1.3E-6 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SRM_RS15740 7bbec003cae1b03fa1b29870dd53c289 423 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 301 399 4.9E-5 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SRM_RS15740 7bbec003cae1b03fa1b29870dd53c289 423 Pfam PF06580 Histidine kinase 202 282 2.9E-24 T 22-04-2016 IPR010559 Signal transduction histidine kinase, internal region GO:0000155|GO:0000160|GO:0016021 SRM_RS15740 7bbec003cae1b03fa1b29870dd53c289 423 PANTHER PTHR34220:SF3 184 406 1.3E-61 T 22-04-2016 SRM_RS15740 7bbec003cae1b03fa1b29870dd53c289 423 PANTHER PTHR34220 184 406 1.3E-61 T 22-04-2016 SRM_RS14395 4302271248d2ef3016d0fe85af0898f9 220 Pfam PF04347 Flagellar biosynthesis protein, FliO 122 213 2.1E-11 T 22-04-2016 IPR022781 Flagellar biosynthesis protein, FliO GO:0016021|GO:0044781 SRM_RS13685 743f090de0211b820046cf15d63889f4 273 Pfam PF11306 Protein of unknown function (DUF3108) 120 222 1.2E-6 T 22-04-2016 IPR021457 Protein of unknown function DUF3108 SRM_RS02530 19147ac265986c837f0bdaf3d41c3ecb 198 Pfam PF11845 Protein of unknown function (DUF3365) 27 190 4.3E-26 T 22-04-2016 IPR021796 Protein of unknown function DUF3365 SRM_RS01435 453db8ea7597a1f998629d984ed4d673 397 Gene3D G3DSA:1.50.10.10 78 213 9.1E-7 T 22-04-2016 IPR012341 Six-hairpin glycosidase GO:0003824 SRM_RS01435 453db8ea7597a1f998629d984ed4d673 397 SUPERFAMILY SSF48208 71 373 1.7E-21 T 22-04-2016 IPR008928 Six-hairpin glycosidase-like GO:0003824 SRM_RS11770 3d7d974395038aabc88fecaeeca717b4 199 SUPERFAMILY SSF52833 6 194 7.4E-52 T 22-04-2016 IPR012336 Thioredoxin-like fold SRM_RS11770 3d7d974395038aabc88fecaeeca717b4 199 PANTHER PTHR10681 4 190 1.8E-57 T 22-04-2016 SRM_RS11770 3d7d974395038aabc88fecaeeca717b4 199 Pfam PF00578 AhpC/TSA family 12 142 7.7E-22 T 22-04-2016 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15 SRM_RS11770 3d7d974395038aabc88fecaeeca717b4 199 PANTHER PTHR10681:SF91 4 190 1.8E-57 T 22-04-2016 SRM_RS11770 3d7d974395038aabc88fecaeeca717b4 199 Gene3D G3DSA:3.40.30.10 11 181 2.1E-29 T 22-04-2016 IPR012336 Thioredoxin-like fold SRM_RS09285 86610c0f90ee8c5a53e5e933a6b28923 412 PANTHER PTHR21666 50 409 6.1E-35 T 22-04-2016 SRM_RS09285 86610c0f90ee8c5a53e5e933a6b28923 412 SUPERFAMILY SSF57997 38 123 2.09E-5 T 22-04-2016 SRM_RS09285 86610c0f90ee8c5a53e5e933a6b28923 412 Gene3D G3DSA:2.70.70.10 267 410 7.7E-33 T 22-04-2016 SRM_RS09285 86610c0f90ee8c5a53e5e933a6b28923 412 PANTHER PTHR21666:SF213 50 409 6.1E-35 T 22-04-2016 SRM_RS09285 86610c0f90ee8c5a53e5e933a6b28923 412 SUPERFAMILY SSF51261 222 409 1.57E-32 T 22-04-2016 IPR011055 Duplicated hybrid motif SRM_RS09285 86610c0f90ee8c5a53e5e933a6b28923 412 Pfam PF01551 Peptidase family M23 310 396 7.7E-18 T 22-04-2016 IPR016047 Peptidase M23 SRM_RS01780 61621c64b5d969cc7d4960e1eb4858a9 137 SUPERFAMILY SSF88723 1 128 6.45E-14 T 22-04-2016 IPR029060 PIN domain-like SRM_RS01780 61621c64b5d969cc7d4960e1eb4858a9 137 Pfam PF13470 PIN domain 3 115 3.7E-8 T 22-04-2016 IPR002716 PIN domain SRM_RS01290 c1c04b9c3d594cc384957f30b47efc0d 202 Pfam PF04191 Phospholipid methyltransferase 81 177 1.5E-14 T 22-04-2016 IPR007318 Phospholipid methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825|UniPathway: UPA00753 SRM_RS10065 d4837c726da28c844311a5ef0328e7e7 232 Pfam PF00849 RNA pseudouridylate synthase 9 159 7.4E-30 T 22-04-2016 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 SRM_RS10065 d4837c726da28c844311a5ef0328e7e7 232 SUPERFAMILY SSF55120 2 213 1.26E-48 T 22-04-2016 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 SRM_RS10065 d4837c726da28c844311a5ef0328e7e7 232 PANTHER PTHR11079 3 227 8.1E-38 T 22-04-2016 SRM_RS05815 518b5747065b769b783f334ce2895700 166 PANTHER PTHR35024 14 157 2.0E-28 T 22-04-2016 SRM_RS05815 518b5747065b769b783f334ce2895700 166 PANTHER PTHR35024:SF2 14 157 2.0E-28 T 22-04-2016 SRM_RS05815 518b5747065b769b783f334ce2895700 166 Pfam PF04519 Polymer-forming cytoskeletal 29 124 3.1E-25 T 22-04-2016 IPR007607 Protein of unknown function DUF583 SRM_RS06300 8849e2f57257b4b2f72cee846d354e7d 393 Pfam PF13439 Glycosyltransferase Family 4 17 188 3.8E-18 T 22-04-2016 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain SRM_RS06300 8849e2f57257b4b2f72cee846d354e7d 393 Gene3D G3DSA:3.40.50.2000 202 360 4.9E-18 T 22-04-2016 SRM_RS06300 8849e2f57257b4b2f72cee846d354e7d 393 SUPERFAMILY SSF53756 17 385 8.52E-70 T 22-04-2016 SRM_RS06300 8849e2f57257b4b2f72cee846d354e7d 393 Pfam PF00534 Glycosyl transferases group 1 202 350 2.0E-28 T 22-04-2016 IPR001296 Glycosyl transferase, family 1 SRM_RS06300 8849e2f57257b4b2f72cee846d354e7d 393 PANTHER PTHR12526 22 387 2.9E-55 T 22-04-2016 SRM_RS14275 db2db7464179d66cc925832f94fc05a1 623 Pfam PF13584 Oxygen tolerance 34 520 7.9E-94 T 22-04-2016 IPR025738 Aerotolerance-related protein BatD SRM_RS04195 a0423cb582e87de18162782c4d26f407 190 SUPERFAMILY SSF88723 10 121 6.87E-5 T 22-04-2016 IPR029060 PIN domain-like SRM_RS04195 a0423cb582e87de18162782c4d26f407 190 Pfam PF13470 PIN domain 8 113 7.6E-12 T 22-04-2016 IPR002716 PIN domain SRM_RS16105 d72cfde9e079d49171211c857310f323 232 Gene3D G3DSA:2.60.40.10 150 218 1.2E-7 T 22-04-2016 IPR013783 Immunoglobulin-like fold SRM_RS16105 d72cfde9e079d49171211c857310f323 232 SUPERFAMILY SSF81296 150 230 2.1E-18 T 22-04-2016 IPR014756 Immunoglobulin E-set SRM_RS16105 d72cfde9e079d49171211c857310f323 232 Pfam PF16561 Glycogen recognition site of AMP-activated protein kinase 150 229 2.8E-10 T 22-04-2016 IPR032640 AMP-activated protein kinase, glycogen-binding domain SRM_RS08240 7b9961284283307b301c4e9f60c26027 840 Pfam PF00932 Lamin Tail Domain 27 139 6.4E-15 T 22-04-2016 IPR001322 Lamin Tail Domain SRM_RS08240 7b9961284283307b301c4e9f60c26027 840 Pfam PF00932 Lamin Tail Domain 289 399 3.6E-14 T 22-04-2016 IPR001322 Lamin Tail Domain SRM_RS08240 7b9961284283307b301c4e9f60c26027 840 Pfam PF00932 Lamin Tail Domain 540 677 2.3E-8 T 22-04-2016 IPR001322 Lamin Tail Domain SRM_RS08240 7b9961284283307b301c4e9f60c26027 840 Pfam PF13860 FlgD Ig-like domain 750 820 2.2E-6 T 22-04-2016 IPR025965 FlgD Ig-like domain SRM_RS11640 497cda2d7c1c018059516f910bacb23b 140 Pfam PF06155 Protein of unknown function (DUF971) 45 134 1.2E-23 T 22-04-2016 IPR010376 Domain of unknown function DUF971 Reactome: REACT_13|UniPathway: UPA00118 SRM_RS01990 27594cfa02cf02e885373a19b88d7a56 280 SUPERFAMILY SSF53795 87 142 1.04E-6 T 22-04-2016 SRM_RS01990 27594cfa02cf02e885373a19b88d7a56 280 Gene3D G3DSA:3.40.50.300 86 154 1.6E-9 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SRM_RS09150 8a2af3ec07e43247a4ef78e07c80a4da 86 SUPERFAMILY SSF47598 3 41 7.12E-5 T 22-04-2016 IPR010985 Ribbon-helix-helix GO:0006355 SRM_RS09150 8a2af3ec07e43247a4ef78e07c80a4da 86 Gene3D G3DSA:1.10.1220.10 3 38 3.6E-4 T 22-04-2016 IPR013321 Arc-type ribbon-helix-helix GO:0006355 SRM_RS12945 9c91275f308a8c9bf4f8e243136eb32f 73 Pfam PF09413 Putative prokaryotic signal transducing protein 7 70 1.8E-6 T 22-04-2016 IPR018551 Domain of unknown function DUF2007 SRM_RS12945 9c91275f308a8c9bf4f8e243136eb32f 73 SUPERFAMILY SSF54913 7 70 8.45E-5 T 22-04-2016 IPR011322 Nitrogen regulatory PII-like, alpha/beta SRM_RS09315 a2f34a1169c8908e6ae18513ee6cd4ca 221 SUPERFAMILY SSF46565 18 126 1.96E-7 T 22-04-2016 IPR001623 DnaJ domain SRM_RS09315 a2f34a1169c8908e6ae18513ee6cd4ca 221 Gene3D G3DSA:1.10.287.110 85 126 7.5E-6 T 22-04-2016 IPR001623 DnaJ domain SRM_RS09010 604a7de61777c80541008a1ed21c35fe 346 Pfam PF12412 Protein of unknown function (DUF3667) 71 114 1.2E-12 T 22-04-2016 IPR022134 Protein of unknown function DUF3667 SRM_RS13130 e173594ee868666352fa4ab05bdb1a08 232 Pfam PF07486 Cell Wall Hydrolase 106 207 4.2E-8 T 22-04-2016 IPR011105 Cell wall hydrolase, SleB GO:0016787 SRM_RS02115 aa64774bfcd886f825411977642d7249 276 Gene3D G3DSA:1.25.40.10 68 264 1.4E-13 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 SRM_RS02115 aa64774bfcd886f825411977642d7249 276 Pfam PF07719 Tetratricopeptide repeat 229 262 3.2E-6 T 22-04-2016 IPR013105 Tetratricopeptide repeat 2 SRM_RS02115 aa64774bfcd886f825411977642d7249 276 SUPERFAMILY SSF48452 95 263 5.41E-12 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 SRM_RS03615 40520749aac9d23d7ec15fff28d974da 156 SUPERFAMILY SSF88723 5 119 1.24E-6 T 22-04-2016 IPR029060 PIN domain-like SRM_RS11685 bed5548ad4429687d3e1a02c282e4e89 208 Pfam PF10634 Fe2+ transport protein 46 196 8.1E-33 T 22-04-2016 IPR018470 Periplasmic metal-binding protein Tp34-type SRM_RS02540 02080944576d6abe01d9fb682048adda 72 Pfam PF03597 Cytochrome oxidase maturation protein cbb3-type 8 47 1.7E-5 T 22-04-2016 IPR004714 Cytochrome oxidase maturation protein cbb3-type SRM_RS06725 84e8d81327b458b01af4748ab08a9550 289 Pfam PF12412 Protein of unknown function (DUF3667) 14 57 8.7E-10 T 22-04-2016 IPR022134 Protein of unknown function DUF3667 SRM_RS02490 44b116bd874dda76b744f0e406f35041 102 Pfam PF10006 Uncharacterized conserved protein (DUF2249) 9 77 9.7E-15 T 22-04-2016 IPR018720 Domain of unknown function DUF2249 SRM_RS11430 f0f03dba8812561c59c8f4ed16edd98c 266 Pfam PF13588 Type I restriction enzyme R protein N terminus (HSDR_N) 33 122 2.9E-7 T 22-04-2016 IPR029464 Type I restriction enzyme R protein, N-terminal domain SRM_RS11430 f0f03dba8812561c59c8f4ed16edd98c 266 PANTHER PTHR41907 1 241 3.3E-18 T 22-04-2016 SRM_RS04170 02af9b52d92348463fc8b408272ed869 87 Pfam PF03683 Uncharacterised protein family (UPF0175) 7 79 7.4E-17 T 22-04-2016 IPR005368 Uncharacterised protein family UPF0175 SRM_RS13790 9c3688914fd16976a22d0b95e7225abe 81 Gene3D G3DSA:1.10.10.10 13 77 1.0E-6 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SRM_RS13790 9c3688914fd16976a22d0b95e7225abe 81 SUPERFAMILY SSF46785 17 74 3.06E-6 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SRM_RS04325 127b3ecf892fd6f6f815367f5686b2ff 169 SUPERFAMILY SSF53098 4 160 9.1E-8 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 SRM_RS15225 8f3d2a46629bf4b8383e18b8fea19bd2 227 Pfam PF14321 Domain of unknown function (DUF4382) 52 214 3.1E-35 T 22-04-2016 IPR025491 Domain of unknown function DUF4382 SRM_RS01545 aa4037fd819a0a3cf6b82c1634f906e7 69 Gene3D G3DSA:1.10.357.20 3 67 1.8E-4 T 22-04-2016 IPR006667 SLC41 divalent cation transporters, integral membrane domain GO:0006812|GO:0008324 SRM_RS08915 743879a9fc6fcadb705fbc3e2050d803 302 Pfam PF16119 Domain of unknown function (DUF4835) 26 299 2.1E-84 T 22-04-2016 IPR032274 Protein of unknown function DUF4835 SRM_RS08860 cce9ca1d29a42619da23067df0511a3d 446 Pfam PF13413 Helix-turn-helix domain 17 78 2.1E-10 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 SRM_RS04695 02e5dd5e76db3dced5f46617114795b4 61 SUPERFAMILY SSF57783 5 45 6.29E-5 T 22-04-2016 SRM_RS04695 02e5dd5e76db3dced5f46617114795b4 61 Pfam PF14255 Cysteine-rich CPXCG 9 48 2.8E-17 T 22-04-2016 IPR025990 Cysteine-rich CPXCG protein SRM_RS02970 75435669f21d87f8e6e50f58fc7e1dea 290 PANTHER PTHR33452 26 190 3.3E-20 T 22-04-2016 SRM_RS02970 75435669f21d87f8e6e50f58fc7e1dea 290 Pfam PF07681 DoxX 47 128 7.3E-8 T 22-04-2016 IPR032808 DoxX family SRM_RS04270 a110da3807ec528d289c746d250ed737 80 Pfam PF07362 Post-segregation antitoxin CcdA 5 55 8.0E-5 T 22-04-2016 IPR009956 Post-segregation antitoxin CcdA SRM_RS01660 f2e516eb73e799369853a27cf2c12eda 323 Pfam PF14054 Domain of unknown function (DUF4249) 8 304 6.0E-33 T 22-04-2016 IPR025345 Protein of unknown function DUF4249 SRM_RS15905 50e0908bcc1917fb25748c8de246bb1d 338 Pfam PF00535 Glycosyl transferase family 2 9 123 9.7E-20 T 22-04-2016 IPR001173 Glycosyltransferase 2-like SRM_RS15905 50e0908bcc1917fb25748c8de246bb1d 338 SUPERFAMILY SSF53448 2 230 1.63E-37 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases SRM_RS15905 50e0908bcc1917fb25748c8de246bb1d 338 PANTHER PTHR22916 5 289 1.5E-29 T 22-04-2016 SRM_RS15905 50e0908bcc1917fb25748c8de246bb1d 338 Gene3D G3DSA:3.90.550.10 5 233 3.1E-33 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases SRM_RS09985 30df9c3638d709375ea1d12fe0cd49ab 434 Pfam PF17116 Domain of unknown function (DUF5103) 54 335 2.0E-39 T 22-04-2016 IPR031345 Protein of unknown function DUF5103 SRM_RS06810 e9b5e92dfec54bc328d95efe3f806baa 410 PANTHER PTHR33529:SF1 48 410 2.3E-57 T 22-04-2016 SRM_RS06810 e9b5e92dfec54bc328d95efe3f806baa 410 Pfam PF03739 Predicted permease YjgP/YjgQ family 55 406 3.4E-81 T 22-04-2016 IPR005495 Permease LptG/LptF-related GO:0016021 SRM_RS06810 e9b5e92dfec54bc328d95efe3f806baa 410 PANTHER PTHR33529 48 410 2.3E-57 T 22-04-2016 SRM_RS02360 9a17a9c5c96eda67edf13b5a74b8b0cc 124 Pfam PF05154 TM2 domain 50 92 1.5E-6 T 22-04-2016 IPR007829 TM2 domain SRM_RS16100 e203d912fab88e5a379a7033030cef8a 500 Pfam PF14054 Domain of unknown function (DUF4249) 11 298 7.4E-30 T 22-04-2016 IPR025345 Protein of unknown function DUF4249 SRM_RS11905 1472377dd91db9ffa6da886829e31789 149 TIGRFAM TIGR02229 caa3_sub_IV: caa(3)-type oxidase, subunit IV 6 94 1.0E-22 T 22-04-2016 IPR011743 Caa(3)-type oxidase, subunit IV SRM_RS11905 1472377dd91db9ffa6da886829e31789 149 Pfam PF03626 Prokaryotic Cytochrome C oxidase subunit IV 16 84 2.1E-14 T 22-04-2016 IPR005171 Cytochrome C oxidase subunit IV, prokaryotes GO:0016021 SRM_RS09880 2b96796853e92b520c1b0104df42b178 131 Pfam PF09413 Putative prokaryotic signal transducing protein 7 71 3.1E-8 T 22-04-2016 IPR018551 Domain of unknown function DUF2007 SRM_RS03610 c9c4d56a511856a4d52daff58c483ec1 60 Pfam PF09722 Protein of unknown function (DUF2384) 14 57 1.6E-11 T 22-04-2016 IPR024467 Domain of unknown function DUF2384 SRM_RS05705 87e450d1408b21c468ae8542ec6eac3a 213 Pfam PF13568 Outer membrane protein beta-barrel domain 22 182 4.2E-14 T 22-04-2016 IPR025665 Outer membrane protein beta-barrel domain SRM_RS07915 69fae29de1668d311568159cc734cf90 479 Gene3D G3DSA:2.40.160.60 35 295 6.3E-7 T 22-04-2016 SRM_RS08125 f753dfde7095f59e5c0c6f7b61c8b16e 183 Pfam PF13778 Domain of unknown function (DUF4174) 54 174 4.3E-33 T 22-04-2016 IPR025232 Domain of unknown function DUF4174 SRM_RS03380 1d3850824f1e5cf803f6553bc60f217a 158 Pfam PF04307 LexA-binding, inner membrane-associated putative hydrolase 4 158 9.3E-10 T 22-04-2016 IPR007404 LexA-binding, inner membrane-associated putative hydrolase SRM_RS02100 1f9df2f89d76eeb8f5091d21834f9ccb 174 Pfam PF13211 Protein of unknown function (DUF4019) 62 167 1.2E-17 T 22-04-2016 IPR025091 Protein of unknown function DUF4019 SRM_RS04255 84cecf20207381a7d9a68cc3f5d9d537 57 Pfam PF13470 PIN domain 3 31 2.8E-7 T 22-04-2016 IPR002716 PIN domain SRM_RS05580 51f5b6d4569944579da8c973c415ca19 70 Pfam PF04324 BFD-like [2Fe-2S] binding domain 6 53 8.0E-6 T 22-04-2016 IPR007419 BFD-like [2Fe-2S]-binding domain SRM_RS03340 cf4701c4b3a5375ffc49ca2cf0c3ac1d 150 Gene3D G3DSA:1.20.1300.10 72 147 4.6E-22 T 22-04-2016 SRM_RS03340 cf4701c4b3a5375ffc49ca2cf0c3ac1d 150 Gene3D G3DSA:1.20.1300.10 3 35 4.6E-22 T 22-04-2016 SRM_RS03340 cf4701c4b3a5375ffc49ca2cf0c3ac1d 150 SUPERFAMILY SSF81343 73 147 3.49E-15 T 22-04-2016 SRM_RS03340 cf4701c4b3a5375ffc49ca2cf0c3ac1d 150 SUPERFAMILY SSF81343 6 33 3.49E-15 T 22-04-2016 SRM_RS01710 5124c78064fcd33c494db4e1917329e4 99 Pfam PF05402 Coenzyme PQQ synthesis protein D (PqqD) 30 96 3.6E-14 T 22-04-2016 IPR008792 Coenzyme PQQ synthesis D UniPathway: UPA00539 SRM_RS04420 a80ee8c948c498fb95f9770ec0c4e807 125 Pfam PF01927 Mut7-C RNAse domain 2 91 4.3E-5 T 22-04-2016 IPR002782 Mut7-C RNAse domain SRM_RS12030 c6edf4fad428985ceeec66f6f41cd1e5 159 Pfam PF09858 Predicted membrane protein (DUF2085) 47 139 2.8E-21 T 22-04-2016 IPR019206 Protein of unknown function DUF2085, transmembrane SRM_RS00925 55dc70f35959b95dc7acf8d569790c0a 173 Pfam PF02620 Uncharacterized ACR, COG1399 56 170 3.8E-21 T 22-04-2016 IPR003772 Protein of unknown function DUF177 SRM_RS04765 2ba1400f2fe3fff9683ad62631606b6a 130 Pfam PF10985 Protein of unknown function (DUF2805) 16 75 9.4E-24 T 22-04-2016 IPR019882 Conserved hypothetical protein CHP03643 SRM_RS04765 2ba1400f2fe3fff9683ad62631606b6a 130 TIGRFAM TIGR03643 TIGR03643: TIGR03643 family protein 13 75 4.5E-30 T 22-04-2016 IPR019882 Conserved hypothetical protein CHP03643 SRM_RS03420 3b0c9c73295a853c1e61a44e607ff1e0 186 Pfam PF11375 Protein of unknown function (DUF3177) 5 178 6.7E-45 T 22-04-2016 IPR021515 Protein of unknown function DUF3177 SRM_RS10985 af6e0b2fa84001a6e25126c1dc56ff53 219 Pfam PF07758 Protein of unknown function (DUF1614) 40 214 2.6E-47 T 22-04-2016 IPR011672 Protein of unknown function DUF1614 SRM_RS03110 1ce9eb927ad398e4e0b19f1d2c2dce84 543 PANTHER PTHR41339 27 497 6.4E-32 T 22-04-2016 SRM_RS05650 e7cf7e39826f8cd885e14eade0f053dd 264 Gene3D G3DSA:2.50.20.10 105 195 1.8E-4 T 22-04-2016 SRM_RS14050 d31b5b4ef6ff0d6bceb51a5cb8433675 95 Pfam PF13396 Phospholipase_D-nuclease N-terminal 51 94 1.1E-13 T 22-04-2016 IPR027379 Cardiolipin synthase N-terminal SRM_RS14150 1a644127eb81f66a8a72a5f8ae5c02e5 537 Gene3D G3DSA:2.40.160.60 42 176 1.1E-41 T 22-04-2016 SRM_RS14150 1a644127eb81f66a8a72a5f8ae5c02e5 537 Gene3D G3DSA:2.40.160.60 220 513 1.1E-41 T 22-04-2016 SRM_RS14150 1a644127eb81f66a8a72a5f8ae5c02e5 537 SUPERFAMILY SSF56935 217 493 4.39E-15 T 22-04-2016 SRM_RS14150 1a644127eb81f66a8a72a5f8ae5c02e5 537 SUPERFAMILY SSF56935 43 113 4.39E-15 T 22-04-2016 SRM_RS14150 1a644127eb81f66a8a72a5f8ae5c02e5 537 Pfam PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) 232 491 1.5E-10 T 22-04-2016 IPR005017 Outer membrane protein transport protein (OMPP1/FadL/TodX) SRM_RS09700 5effde17db939d65762282783a2be96b 248 PANTHER PTHR30625:SF8 28 247 5.4E-64 T 22-04-2016 SRM_RS09700 5effde17db939d65762282783a2be96b 248 Pfam PF01618 MotA/TolQ/ExbB proton channel family 95 214 2.8E-30 T 22-04-2016 IPR002898 MotA/TolQ/ExbB proton channel GO:0006810|GO:0008565|GO:0016020 SRM_RS09700 5effde17db939d65762282783a2be96b 248 PANTHER PTHR30625 28 247 5.4E-64 T 22-04-2016 SRM_RS10745 0a59b4fec805673010f5fb590d3992e7 170 Pfam PF07332 Putative Actinobacterial Holin-X, holin superfamily III 35 116 2.3E-9 T 22-04-2016 IPR009937 Putative Actinobacterial Holin-X, holin superfamily III SRM_RS11970 8be8908a31b06ce0b2ac8926d27ec916 134 Pfam PF09996 Uncharacterized protein conserved in bacteria (DUF2237) 7 121 1.7E-53 T 22-04-2016 IPR018714 Protein of unknown function DUF2237 SRM_RS11970 8be8908a31b06ce0b2ac8926d27ec916 134 PANTHER PTHR37466 1 133 3.6E-46 T 22-04-2016 SRM_RS08890 3e9d09922cb4d3ae6b79f9a024892e40 1613 Pfam PF04357 TamB, inner membrane protein subunit of TAM complex 1098 1555 2.1E-64 T 22-04-2016 IPR007452 Translocation and assembly module TamB SRM_RS09675 0362f6aac8eeee8f94bad1fdd3964805 141 Pfam PF14126 Domain of unknown function (DUF4293) 2 140 1.7E-21 T 22-04-2016 IPR025635 Protein of unknown function DUF4293 SRM_RS09995 5b00df15d6ec9357b561a3266e442a7e 319 Pfam PF11276 Protein of unknown function (DUF3078) 58 150 4.3E-19 T 22-04-2016 IPR021428 Protein of unknown function DUF3078 SRM_RS12645 a9721d521c1abb7f15eb87db650ffb96 112 TIGRFAM TIGR02610 PHA_gran_rgn: putative polyhydroxyalkanoic acid system protein 19 108 4.8E-20 T 22-04-2016 IPR013433 Putative polyhydroxyalkanoic acid system protein SRM_RS12645 a9721d521c1abb7f15eb87db650ffb96 112 Pfam PF09650 Putative polyhydroxyalkanoic acid system protein (PHA_gran_rgn) 22 108 4.3E-27 T 22-04-2016 IPR013433 Putative polyhydroxyalkanoic acid system protein SRM_RS03230 20c291ef1184e02d6f288306cee9138a 341 Gene3D G3DSA:3.40.50.300 3 174 6.7E-23 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SRM_RS03230 20c291ef1184e02d6f288306cee9138a 341 Pfam PF03969 AFG1-like ATPase 15 197 1.5E-23 T 22-04-2016 IPR005654 ATPase, AFG1-like GO:0005524 SRM_RS03230 20c291ef1184e02d6f288306cee9138a 341 Pfam PF03969 AFG1-like ATPase 214 329 1.9E-4 T 22-04-2016 IPR005654 ATPase, AFG1-like GO:0005524 SRM_RS03230 20c291ef1184e02d6f288306cee9138a 341 SUPERFAMILY SSF52540 54 168 2.27E-14 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SRM_RS15930 c0bf9e3a2d17c5cbb0654aae71a05394 162 Pfam PF13471 Transglutaminase-like superfamily 38 147 5.7E-17 T 22-04-2016 IPR032708 Microcin J25-processing protein McjB, C-terminal SRM_RS14330 7f724aed7a28289a1951daea88f745b0 150 Pfam PF14114 Domain of unknown function (DUF4286) 42 144 3.8E-21 T 22-04-2016 IPR025563 Protein of unknown function DUF4286 SRM_RS02000 46f3c9210ec0619d3990358742dd7bf3 99 Pfam PF05402 Coenzyme PQQ synthesis protein D (PqqD) 19 85 3.4E-15 T 22-04-2016 IPR008792 Coenzyme PQQ synthesis D UniPathway: UPA00539 SRM_RS13825 5528e257ac6a1ae64c57173526b9b014 502 SUPERFAMILY SSF103473 248 483 1.91E-5 T 22-04-2016 IPR020846 Major facilitator superfamily domain SRM_RS15000 083b6b0b081999ad6e2206fe45830596 477 Pfam PF14052 Capsule assembly protein Wzi 58 444 1.5E-41 T 22-04-2016 IPR026950 Capsule assembly protein Wzi SRM_RS04115 52bc2851e444deb983d4a0bce349024b 88 Pfam PF03683 Uncharacterised protein family (UPF0175) 7 80 1.3E-17 T 22-04-2016 IPR005368 Uncharacterised protein family UPF0175 SRM_RS01925 d5b2bfbc70fbe28814916f161d6968a4 436 Pfam PF04932 O-Antigen ligase 197 297 5.9E-7 T 22-04-2016 IPR007016 O-antigen ligase-related SRM_RS14080 0aeb8587dcf3f848223e04a497c6357b 208 Pfam PF13618 Gluconate 2-dehydrogenase subunit 3 58 186 2.1E-32 T 22-04-2016 IPR027056 Gluconate 2-dehydrogenase subunit 3 KEGG: 00030+1.1.99.3|MetaCyc: PWY-7165 SRM_RS12635 94c7b8f94ae5e03b45d1a9c6159e5560 223 Pfam PF09601 Protein of unknown function (DUF2459) 43 203 5.7E-36 T 22-04-2016 IPR011727 Conserved hypothetical protein CHP02117 SRM_RS09795 2727f4c4aa4d8f0dbbe35e177bf319fb 186 Pfam PF11138 Protein of unknown function (DUF2911) 39 181 9.5E-54 T 22-04-2016 IPR021314 Protein of unknown function DUF2911 SRM_RS05095 fd87076385ed4bd66e1cbb456152ff28 229 Pfam PF13709 Domain of unknown function (DUF4159) 36 227 1.4E-63 T 22-04-2016 IPR025297 Domain of unknown function DUF4159 SRM_RS11275 eaf02a0c4716db8b84ff26a8a3556831 69 Pfam PF11127 Protein of unknown function (DUF2892) 1 66 4.6E-17 T 22-04-2016 IPR021309 Protein of unknown function DUF2892 SRM_RS01240 056d3585dced9bd1cc26afb322eb8a0a 168 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 58 152 1.6E-4 T 22-04-2016 IPR003959 ATPase, AAA-type, core GO:0005524 SRM_RS11550 bec7d19afcd1c92e84b510b1e9b14bd0 141 Pfam PF13564 DoxX-like family 10 117 2.0E-23 T 22-04-2016 IPR032808 DoxX family SRM_RS02205 dd67ab4cf40b41d380ba1f019dc9852e 96 Pfam PF08808 RES domain 32 82 2.6E-7 T 22-04-2016 IPR014914 RES domain SRM_RS04750 22bc1a5d8e8bf138b19a67e4432a5967 174 Pfam PF09980 Predicted membrane protein (DUF2214) 19 174 2.6E-51 T 22-04-2016 IPR018706 Protein of unknown function DUF2214, membrane SRM_RS01065 fd93ee7a42902011ae8829b27d8f7fad 127 Gene3D G3DSA:3.40.50.150 21 102 1.1E-4 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SRM_RS01065 fd93ee7a42902011ae8829b27d8f7fad 127 SUPERFAMILY SSF53335 19 115 8.62E-7 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SRM_RS01560 9f17e9b8dc6a81662e217f5dbde7fcdd 306 Pfam PF02517 CAAX protease self-immunity 146 242 6.7E-10 T 22-04-2016 IPR003675 CAAX amino terminal protease GO:0016020 SRM_RS11535 d0a571d2736caf1e9275ff3689f5a32c 344 Pfam PF01699 Sodium/calcium exchanger protein 197 335 3.0E-10 T 22-04-2016 IPR004837 Sodium/calcium exchanger membrane region GO:0016021|GO:0055085 Reactome: REACT_15518 SRM_RS11535 d0a571d2736caf1e9275ff3689f5a32c 344 Pfam PF01699 Sodium/calcium exchanger protein 17 100 1.4E-6 T 22-04-2016 IPR004837 Sodium/calcium exchanger membrane region GO:0016021|GO:0055085 Reactome: REACT_15518 SRM_RS12355 ce1a424949e1ec418780a60f5ce400a9 258 SUPERFAMILY SSF53098 25 227 3.64E-14 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 SRM_RS12875 120205c23b13e008ad5b15a94d1a3e60 289 Pfam PF13568 Outer membrane protein beta-barrel domain 69 246 2.8E-20 T 22-04-2016 IPR025665 Outer membrane protein beta-barrel domain SRM_RS02240 179e124b1deff3402ccd2dc2812fb0c6 539 TIGRFAM TIGR04183 Por_Secre_tail: Por secretion system C-terminal sorting domain 461 536 1.6E-8 T 22-04-2016 IPR026444 Secretion system C-terminal sorting domain SRM_RS02030 deaf6e6545ddb94a9bd4a23c6c2bb90d 624 Pfam PF13148 Protein of unknown function (DUF3987) 92 493 1.3E-35 T 22-04-2016 IPR025048 Protein of unknown function DUF3987) SRM_RS04430 43be96d0c1074d35efe6272d4c437ce7 534 Pfam PF14052 Capsule assembly protein Wzi 105 475 2.0E-32 T 22-04-2016 IPR026950 Capsule assembly protein Wzi SRM_RS09685 9f1bf8141141442c26b6244393edfc4e 153 Pfam PF02472 Biopolymer transport protein ExbD/TolR 13 144 1.5E-16 T 22-04-2016 IPR003400 Biopolymer transport protein ExbD/TolR GO:0005215|GO:0006810|GO:0016020 SRM_RS12330 7ac9b8f4ce136fd5cc9dd98c36cdb07f 731 TIGRFAM TIGR04514 GWxTD_dom: GWxTD domain 203 294 7.5E-13 T 22-04-2016 IPR030959 GWxTD domain