IUJ39_RS00025    5372 ..    5387 +  -4.6  -3.01791   CTCTTCCGGCGTACA              CCAGGC TAAT GCCTGA               TGTTCCAGCGCGCGT  48 90
IUJ39_RS00040    8218 ..    8237 +  -2.8  -2.62616   CATTCAAACGGGAGG            CGCATCAT GCGG GTGATTCG             TCCTGTCGAACATGC  40 10
        astA NONE
        astD NONE
        astB NONE
        astE   13041 ..   13070 +    -8  -2.92613   CTTCCCTGATAAATT       TCCCTGTAAGAT CACGTT ATGTTACAGGGA        TGATTTAGGATAGCG  61 32
         spy   14188 ..   14218 +  -8.9  -4.15044   AACCGCTCCAGTGAT       GCCTGCAGACGAA GAAAA TGCGCCTGCGGGC       TTTCTTGCCCGCAAC  78 359
        osmE   16349 ..   16364 +  -7.5  -5.42259   GTACATTCCAGGAAA              CCGGC CAGCGA GCCGG               TTTTTTTGCGCCTGC  95 57
        chbB   16984 ..   17002 + -11.8  -3.38603   TATTTCATACACTAA             CCGCAATA GTT TATTGCGG             TATTTAAGGGTATTT  85 71
        chbC NONE
        chbA NONE
        chbR   19675 ..   19696 +  -2.2  -3.92542   TCACGCTTGCCCCAA           TAGCGCGG GGAACG TCACGCTA            TTATTTACGAGTGGG  53 69
IUJ39_RS00105 NONE
        chbG   21893 ..   21914 + -15.9  -5.06103   TTTAGCTCCTGAGTT           TGCGGCGCA TTCC TGCGCCGCA            TTTTTTGCCGCTTAT 100 36
        cedA   24020 ..   24042 +   -12  -4.25104   TAAGCAAAATTAAAA           GCGCCGGT CTCAAGT ACCGGCGC           TTTTAGTGACAAGCA  95 38
IUJ39_RS00140   28140 ..   28152 +  -4.1  -2.83903   ACAATGGCGTCAATG                TTGCC AAA GGTAA                TGCCTTTTTCCGCGG  45 434
IUJ39_RS00160   31122 ..   31144 + -17.8  -3.62597   AGATGTAATATTGCC           CCGGGTTACG TTG CGTAACCCGG           TTATTCCGCAGTGGC 100 33
IUJ39_RS00170   33848 ..   33859 +    -3    -4.258   GGCGTCGGACGTATT                TATC AGCA GATA                 TTTGTTGATACGTAC  58 440
IUJ39_RS00195 NONE
IUJ39_RS00200   38236 ..   38249 +  -3.9   -3.3782   TACCAGATTGTGTAC               CAATT TAGC AATTG                TTGGTTAGATGGATA  50 281
        thrS NONE
        infC   40837 ..   40862 + -10.5  -4.65916   CCTTCAAGTAACAAT         TCTGTGAAGCT TTCG GGCTTCACAGG          TTTTGTTCGCCTGGG  91 43
        rpmI   41116 ..   41130 +  -2.9  -4.87291   CCGTACGCATAAGCC               GTTAA CGTTT TTAAC               TTTTTAATTAGAATA  68 29
        rplT   41529 ..   41551 + -17.8  -4.43309   GCATAAGCCAGTGAA           GAGAGGGAGC CTG GCTCCCTCTC           TTTTAATTACGGTTC 100 35
        pheM   41735 ..   41750 + -10.4  -5.64274   AACAGCGCAAAAAAA              GCCTCC TGAT GGAGGC               TTTTTTTGTACCTGA 100 51
        pheS NONE
        pheT NONE
        ihfA   45633 ..   45647 + -12.8  -5.64421   GCGTATAACTAAAAA               GGCCGC ATT GCGGCC               TTTTTTCTTTCAAGT 100 146
        btuC NONE
IUJ39_RS00250 NONE
        btuD   48067 ..   48083 +  -2.9  -3.07291   GTCGAGGGCCATCAA              ATGCTCA TAT TGGGCAC              TTAAGTGAAATCGTT  43 5
IUJ39_RS00260   48639 ..   48656 +  -2.1  -3.93817   TTTAATCTCGCAGAC             GA-CATAA TTT TTATGGTC             TATTTTTAGCATATC  53 36
        ydiV   49703 ..   49726 +  -3.1   -4.2558   ACCGTCTACACTGGA          GACAGGAGGC CCTAT GAC-CCTGTC          TTTTACTGCCCACTG  60 74
IUJ39_RS00270   51156 ..   51195 +    -7  -3.91084   GTCAGTTGTTCAAGT  TAGCCTGACGCCAGCAGA ATCG TCCGCTGGCGGAGCGCTA   TTTGGTTAACAGTAG  68 23
        ppsA   56350 ..   56378 +  -9.6  -2.87051   AAACATGTTGTGTAG       GCCGGATA-AGGC CTAA GCCGCTATCCGGC        ATTTGATAATGCCGG  70 83
IUJ39_RS00310 NONE
        menI   62327 ..   62352 +  -3.2  -3.31144   CTGTGCTGTTCTTCA         CGTCTCACTA CTGCGA TTGTGTGACG          TTGTCACCATAAAAG  48 2
IUJ39_RS00320   62861 ..   62891 + -12.7  -5.45802   CGGATGGGGCCGAAG       CCCTTAAGCCTGT ACTGA ACAGCCTTAAGGG       TTTTTCTTTTGCCGG 100 249
        sufA NONE
        sufB NONE
        sufC NONE
        sufD NONE
        sufS NONE
        sufE   69238 ..   69262 +  -9.3  -3.60952   GCCGGACGGCGACGT          CGCTTTATCCA GAG TGGACAGAGCG          TGTATTTTGTTGTTC  75 79
IUJ39_RS00360   70370 ..   70388 + -14.6  -5.06414   TGACAGACAAAAAAA             TGGCGCAC AGA GTGCGCCA             TTTTTATTACGCAGG 100 55
        ttrS NONE
        ttrR   80714 ..   80729 +  -4.8  -4.86731   AAACTACGCTATTGC              TTTGAT TTGG ATCAAA               TTTTGTTTAAGGGCG  75 46
        fumD   81389 ..   81404 +  -3.9  -3.60348   AGCCGAGAATCACTT              CGCGT AATTCC GCGCG               TTGTCTGCTGTTCAG  53 410
        spiC NONE
        spiA NONE
        sctD NONE
        ssaE   90465 ..   90479 +  -2.2  -3.05022   AATTTTTCTATCGTG               TATATA TCG TGTATA               TGTGTATATACAGGA  42 47
        sseA NONE
        sseB NONE
        sscA NONE
IUJ39_RS00475 NONE
        sseD NONE
IUJ39_RS00485 NONE
IUJ39_RS00490 NONE
        sseF NONE
        sseG   96384 ..   96399 +  -7.6  -3.14454   CGTAGTAACCGTTTT              TCAGGT ATAT ACCTGA               TGTTAACTGGTTTCT  62 36
        sctF NONE
IUJ39_RS00510 NONE
        sctI NONE
        ssaJ NONE
IUJ39_RS00525 NONE
        ssaK NONE
IUJ39_RS00535 NONE
IUJ39_RS00540 NONE
        ssaV NONE
IUJ39_RS00550  103927 ..  103937 +  -5.4  -3.30159   AATTACAGCAAATAC                 TCAC CGA GTGA                 TTCTGGAAACCTTGC  56 15
        ssaO NONE
        ssaP NONE
IUJ39_RS00565  105674 ..  105688 +  -3.6  -3.57561   CATGCAGTATCATGA               GATATA AAG TATGTC               TTTACCAGATTCGCC  51 81
        ssaR NONE
        ssas NONE
IUJ39_RS00580 NONE
IUJ39_RS00585  108890 ..  108919 + -13.7  -2.52623   TATGCAATATGTCGA       GAAAATAGCCGCC ATGC GGCAGCTATTTTC        GTATTATCGCGCAGC  86 489
IUJ39_RS00605  111165 ..  111191 +  -8.6  -2.70932   GCTGACGGAGAGTAA         AAGCCCCCGCAT GTA ATGCGGGGGTGG         TGATTAGCGAGGAAC  64 36
IUJ39_RS00620  115065 ..  115079 +    -7   -3.4072   GCCGGGGTAAAGAAA               CGGGCG TTA CGCACG               TTGTCATAACCGATC  59 206
IUJ39_RS00630  116792 ..  116802 +  -3.2  -4.28774   TTTGATAGCGGCATC                 CGTA AAC TGCG                 TTTTAAATTCCGTGA  60 525
        grxD  118787 ..  118804 + -11.3  -5.04385   TGCGCAAAGGGGAAA             GCGACCT ACTA AGGTCGC              TTTTTTACCAGTATA 100 43
IUJ39_RS00670  122201 ..  122213 +  -4.1   -2.5333   TACTCAACCTCATTA                TTCTC TAT GAGGA                ATCTGTTATGGTTCA  44 56
IUJ39_RS00675  123135 ..  123191 +  -2.4  -3.22113   GCTAACACGTTGACT TTCCGTT-CATGTTTTCGCCAGT GGTTTACACTTA ACAGGCGACCACATGTAACGGAG GTTTTATGAAGCGAT  44 43
       sodC2  123697 ..  123707 +  -8.2  -3.67597   CGGCGGGACGCGTTA                 CGCC TGC GGCG                 TTATTAAATAACCCG  69 4
        slyA  127575 ..  127585 +  -4.6  -5.05712   TACACGCTGACCTGC                 CGTG AAA CGCG                 TTTTTCCTTGTTTCT  81 133
        anmK  129436 ..  129454 +  -8.8  -2.75819   GGAAGGGGCGTTTAC             CTCTCCAG AAG CAGGAGAG             CTTTCGGGATATGTC  64 80
        mliC  129803 ..  129834 +  -8.8  -4.47707   GCGTTGAGATTTTTA     GCA-TGGG-GGCGC ACAATA GCGCCACCCACTGC      TTATTTTTGATCAAC  87 34
        pdxH  130540 ..  130553 +  -8.1  -2.57982   GTTTTAAGCACTGGT               GCGGA TGAA TCCGC                CGTTTTATGCTATGT  59 56
        tyrS  131925 ..  131944 + -12.2  -4.53398   AGGCATTAAGTAACG            GGGAGTGA GAAA TCACTCCC             TTATTTTTAATGTTC 100 40
        pdxY  132809 ..  132830 +  -3.7  -3.75024   TAATCCTGAACACTA           TTTCAG-CGC AAC GCGGCTGTAA           TTATTGCTGCTGAAA  55 4
IUJ39_RS00795  144393 ..  144442 + -17.3  -3.39717   GCCTTGCCTGATGTG CGGCATCTCTCCGCCTG-GGAT AGCATTA AACCGCAGGCGGAGAGATGGCG TTAGTGTTGATGAAT 100 30
IUJ39_RS00815  149970 ..  149984 +  -4.2  -3.74345   TTCCGCATCATCCTG               CTGGTA GCC TTCCAG               TTTCGCTATCTGCGT  56 311
        fumB  154377 ..  154398 + -12.3  -2.70268   CTGCGTTAAGTAACG           TTGCCGCCC TGCG GGGCGGTAA            AATTTTTGCTTAACC  82 28
        fumC  155988 ..  156008 + -11.1  -2.90813   CAGTCGCGGAATAAT            CAGTCGCAG CGG CTGCGCCTG            TGGTTTAAAACGGTG  71 58
IUJ39_RS00865  162017 ..  162029 +  -4.7  -4.36914   TAACGACGCAGAAGG                CGCGC CTT GCGCA                TTTTGTCGCGCGAAG  67 485
        pntA NONE
        pntB  167718 ..  167737 + -11.4  -4.65512   GCTTTTAAATATGCG            GCGGCCTT TCTG GAGGCCGC             TTTTATAATTGTTTT 100 41
        mdtJ NONE
        mdtI  169195 ..  169229 + -11.4  -2.77118   CTGATGGGAATAGAG     CGCATTCAGGTGATCC TCC GGATAACCGGACTGCG     TGACTTTTCGGTCTG  73 315
IUJ39_RS00920  170647 ..  170677 + -13.3  -3.90464   TGGAGTGAAAAGCAG       CCCGGCGATAACG TACAT TGCTATCGCCGGG       TTATCTTCTTTCAGG 100 52
IUJ39_RS00930 NONE
IUJ39_RS00935 NONE
        bioD  175171 ..  175199 +  -8.8  -2.73441   CGCAGGCAATCAGCA        GACCGGGGAGCA ACTGA TACTCGCCGGTC        ATTTCACAAATCATC  60 67
IUJ39_RS01000  188683 ..  188710 + -10.5  -2.72144   TGCGACTCTCCGTGA        CTACCGCGCCG CGTTTA CTGCGCGGTGG         GTTTCAGGAGCGTAG  71 52
IUJ39_RS01015  190122 ..  190154 + -19.9  -4.67755   GTACGTAACATTGCC      GCGCGGCCAGAGCAT TTT GTGATCTGGCCGCGC      TTTTTAGATCAATAT 100 33
        rspA NONE
IUJ39_RS01025 NONE
IUJ39_RS01030  193917 ..  193971 + -12.4  -3.93117   CAGACGAGTTAAATC GTG-TC-GACGGTATGGCCGGAA-CGC TAAT GCGGTTTCGGCCATGCTGTCTGGTCAC TTATTGTGTAATTAG 100 29
IUJ39_RS01035  195662 ..  195675 +  -3.1  -3.61178   TTCGACAATCACCGT               TTTGC CGCG GCGAA                TTTGACCTGCATCCA  51 161
         dcp  199874 ..  199887 +  -3.9    -4.183   ATTTTCTGTGATGAC               TTGAT TGCT ATCAA                TTTATTACCGCTTCG  62 174
IUJ39_RS01060  200300 ..  200318 + -12.4  -5.55769   ATATTGCGCATACAA             TGCGGGCC ATA GGCTCGCA             TTTTTTATTCTGACC 100 75
IUJ39_RS01070  201950 ..  201967 + -10.5  -5.81412   CCATGCAAGCATTTA             CCGCTGG TGAA CCGGCGG              TTTTTTTTGCCTGCC 100 259
IUJ39_RS01100  205083 ..  205115 + -17.2  -2.90615   CCACTAAGGCGCTTT     TTCGTCTGCCGGGAA CGCG TTCCCGGCAG-CGAA      TGCTTTAACGCGGCT 100 34
         sad  208814 ..  208854 +   -12  -3.17146   GCCGCGTCGTGCCCT CTGCTATACTCGCAGGTCT TTTC AGACCTGCGAGCA-AGGAG  TATGTTGTGGCCAGG  83 51
        glsB NONE
IUJ39_RS01125  210361 ..  210379 +  -2.3  -3.17622   TATCAGCCCGACGAT             GGCTCGT TTTAT GCGATCC             TATGTTGTGAACCTG  44 240
IUJ39_RS01130  211036 ..  211050 +  -2.1  -4.07687   TATGTAAAAGGGTAT               CACGA ATTAC TTGTG               TTTTCACAAACAGGT  55 61
        spvR  223696 ..  223710 +  -2.8  -2.83112   CGTCAATCTGACACA               GAATCA GTT TGATGC               TCTGGTGAATTACCT  41 164
IUJ39_RS01220  224183 ..  224204 + -10.1  -3.54741   AAGCAGAAAATATAC           CTGGCCATC GTCA GACGGCCAG            TTTCAGGAGATAGTG  77 313
        spvB  226133 ..  226155 +  -2.6  -3.31247   TTACCCTTCTGTAAC           TTTCTGCTCG GAA CGGACCGAAA           TATCATTTTTTTCGC  46 162
        spvC  227014 ..  227050 + -16.8  -3.83756   AGTAAGTACTGCGCT    GACCCACCAACATTCA TCTCT TGAATGTTGGTGGGTA    TTTCGGTTGTCATTT 100 36
IUJ39_RS01245 NONE
IUJ39_RS01250  229088 ..  229109 +    -6  -3.76968   AAAATTATCTATGTA           TCATATAG GTAATA CTATATGA            TTTAATGAGTCGATT  64 14
IUJ39_RS01255  230329 ..  230343 +   -10  -3.81948   GAACGCGACGAAATG               CCGGAA TCA TTCCGG               TGTTTTGTCGGGTTG  80 278
IUJ39_RS01260 NONE
IUJ39_RS01265  231389 ..  231401 +  -3.3  -3.53091   TATTTGCGAAAACAG                GTGGA TGA TCCCC                TTTAAAGGCACAAAT  50 8
IUJ39_RS01270  232448 ..  232459 +  -4.4  -2.81725   TAAATGCGTCGTCAA                CAGT AAAA ACTG                 TGATTGATATCAAAT  47 38
        nhaC NONE
IUJ39_RS01280  235379 ..  235405 + -13.7  -3.66095   CCACCATCGCCCAAA         CCCAACCGGCC ATAAA GACCGGTTGGG         TTTGGATCGCAGTTT 100 159
         bdm  244393 ..  244406 +  -6.7  -4.05714   AGGGGTTACGTTTCT               TTCGC GTAA GCGAA                TTTGTCCTTAAAACT  70 68
         sra  244615 ..  244636 + -13.1  -5.38054   TGAAATGACGTTAAA           CACCATTGC CTCT GCAATGGTG            TTTTTGTTTATAGGA 100 52
IUJ39_RS01325  246465 ..  246497 + -10.6  -4.64024   GTACTTCCATTTAAT     GTG-TACCCGGCGGT AAAT GCCGCCGGATATCAC      TTTCTTCTTTAGTTT  95 27
        adhP  247798 ..  247823 + -17.7  -3.86346   GGCAGCAGATGAAAA         CAAGGCGCTAC CATT GTAGCGCCTTG          TTTATAAGCGACTGA 100 78
        yddG  253982 ..  253998 +  -6.7  -2.80252   GCGATCTTGATCACA              CAAATTA AAA TAATTTG              TAATCTTATGAAACT  55 411
        ompD  255236 ..  255256 + -13.3  -5.13344   TAGTCTGAATACAAA            GCCAGTCCT TTC AGGGCTGGC            TTTTTCTCTTGATGT 100 49
IUJ39_RS01360  256080 ..  256096 +  -7.9  -4.82901   GCCATCGTTTCTATA              GCGCCAG CCG CTGCCGC              TTTTTCTGCCGGCGC  90 369
IUJ39_RS01370  258099 ..  258109 +  -3.2   -5.9667   CTCAAAAGAGCGCGT                 GACG ATC TGTC                 TTTTTTTGTGTTTTT 100 180
IUJ39_RS01385  262109 ..  262123 +  -7.2   -2.6914   TTTAATCGTCGCTAC               GTTTTG TTG CAAAAC               ATTCTGTAAACAGTA  52 106
        mddA NONE
IUJ39_RS01405  265320 ..  265364 +  -9.1  -4.25053   TTTAATGGATTACAG GATCGTGCCGCCTTTCGTGAG CTG CTCGCGGCGCGCGTCCCGATC TTCTTTATATTGTCG  82 36
        srfA NONE
IUJ39_RS01420 NONE
        srfC  272458 ..  272470 +  -3.3  -5.76949   CCAGAGGAAAAACGC                GCGCA ATA TGCTC                TTTTTTTTGAGACTC 100 276
        yncL  272729 ..  272775 + -12.3  -4.79667   TGATGTATTGTATTG CTG-CGCATGTTGGCGAGGAGG TTCC CCTCTTCGCCAACACCCGCCTG TTTTTCGTGACTTTT 100 38
        sifB  279142 ..  279155 +  -3.1  -3.27774   AGTACCCCATTGAGG               GAATG GTAC CGTTC                TTCATGGTTACAATG  48 59
IUJ39_RS01465  279974 ..  279986 +  -4.8  -4.25848   AATTAAACGCCCCTG                CGCT TCGGC AGCG                TTTTCATCAACGCTT  65 39
        ydcK  286927 ..  286939 +  -4.8   -3.5764   GAACATGACTTTCAT                CTGC CGCTC GCAG                TTTCAGCGTAGCGTT  55 513
IUJ39_RS01520  288788 ..  288798 +  -8.2  -2.75844   CGGCTCAATGCCCTT                 CGGC GCG GCCG                 CTTTCAGATCGCCGC  60 377
IUJ39_RS01540  294667 ..  294715 +  -9.6  -3.78934   ACGCGTCGACGGCCT GCGTCAAGCGGGCGGCCTGTTCTT CAA GAGAAACCGCCGC-CGCT-GACGC TTCTTCTACCAGCGA  76 148
IUJ39_RS01565  299438 ..  299450 +  -7.7  -3.54488   AAACAACATAATTAA                CTACC GTC GGTAG                TATTATTTCCCGGCA  67 39
IUJ39_RS01580  302795 ..  302805 +  -2.4  -3.86495   GGATATATTTATCGA                 GGCG CCA CGCA                 TTATCATTTTTTTAC  53 178
IUJ39_RS01595  304204 ..  304237 +  -8.2  -4.61199   AGACCCGTTCTCCTT    CGCCTGCGTC--ACGG GTCT CGGTTAGACGCAGGCG     TTTTCTGTATGGAAT  85 171
        azoR  310566 ..  310585 + -13.6  -2.67316   GCCTAAACATTTTCA            CCTCCCGT TTCG ACGGGAGG             TAGCTTCTTCGGTTC  86 35
IUJ39_RS01650  316695 ..  316718 + -12.4  -4.13767   CTGTTCTAATCCTGT          CGCTCCCCTG CGCA CAGGGGAGCA           TTTTCGGATAACCCC 100 32
        hslJ  317396 ..  317413 +  -6.9   -2.8552   CGCAATTCGCCTCTC             CGGCGCT GGAC ATCGCCG              CTTTCATCCCTGGCG  54 212
        nifJ  321355 ..  321374 + -13.6  -3.50047   CCTGGAAACAAAAAA            GCCCGAAC ATCC GTTCGGGC             TTGTCAATTTATACG 100 60
        uspF  322211 ..  322221 +  -3.2  -2.83822   TGTGCGTCATGCGGA                 GTGC TCC GTAC                 TGGTTGTACGCTAAA  43 1
        ttcA  328344 ..  328368 + -10.1  -4.13014   TGTCGCACAGCGACG          TAAACGTGCAT TGG ATGCACGTTAA          TTTTGCCGATATCCG  83 166
         ogt  334369 ..  334381 +  -4.8  -3.36175   TATTATGAAAATACA                GGCA AAATG TGCC                TTATCGATCACACTT  54 33
         fnr  335333 ..  335383 +  -6.3   -2.5789   TACACTACTGGCGTA ATCTTCTGCCATATCGTTAAATT TTTCT GATTTATTGATGTGGCAGAAGCG CTTCCTACTGTTTCA  53 49
        uspE  336906 ..  336922 +  -7.3  -3.40403   AAAATACCTGTTAAT              CAGTTCA TTC TGAGCTG              TTATCGTAGGAAGGA  63 523
IUJ39_RS01745  338247 ..  338260 +  -3.7  -2.75229   AATTCACAGGTGTCG               GCCGG ATGC CCTGC                TGATTCAAACTTTTC  43 290
IUJ39_RS01755 NONE
IUJ39_RS01760  340006 ..  340017 +    -3  -3.29144   TTGATCTCATTAATT                TTCA GTCC TGAA                 TTATCCAAAAACTGG  46 258
IUJ39_RS01785  345579 ..  345607 +  -4.5  -5.38047   TGCGGTCATACAAAA        CCGGAAACAAG CTTTACA CCTGTTACCGG        TTTTTTATATGCATA  84 181
        mpaA  352193 ..  352203 +  -2.4  -4.44974   TGCCAGCGCCTCTGT                 CAGG CCT CCAG                 TTTTGTCCAGTTTGA  63 204
         tpx  353635 ..  353658 + -13.2  -4.61147   GCTTGTTTGTCACAA          GAAGGCCTCC ATTC GGAGGCTTTC           TTTTCTCTACTCTTC 100 84
IUJ39_RS01850  358976 ..  359003 + -10.6  -2.52946   GCTGGCCTGAATTAA        C-GGCTGCCCG TCAATAT CGGGCAGCCAG        CGTTTTGTCAGAAAG  74 31
        pspF NONE
        sapA NONE
        sapB  377434 ..  377471 +  -7.7   -4.3277   CATTATTTTCTGCTT   TCTCCGGCAGTCCATGT TTCG ATGATGATTGCCGGAGA    TTTATCTTCTCTATC  79 133
IUJ39_RS01950  379392 ..  379408 +  -7.9  -3.53779   GCTTCACGAAGCTGC              GCTGCTG TTT CAGCCGC              TTCGTCTTTTACCCA  64 421
        sapC NONE
        sapD NONE
        sapF  385517 ..  385537 + -11.9  -3.67737   CTCTGAGGGTGTACA            CGCTGCTGT CCA ACAGCAGTG            TTTCAACCTTTTCTA  85 67
        fabI  389540 ..  389563 +    -8  -2.86676   CATTGAGTTTATTAG          CGGGCGACAC GACT GTGCCGCCCC           ATTTCCGTTCATCCC  61 44
IUJ39_RS02020  391916 ..  391942 + -12.4  -5.13722   GTTTAGCGTTCTCAA         CGACCTTTGC CTTTTCA GCAAAGGTCG         TTTTCTTTTACTCCC 100 45
IUJ39_RS02030 NONE
IUJ39_RS02035  394076 ..  394103 + -17.2  -2.99649   GTTTAAAATATTTCC        GGATGATTTGCC CTAT GGCAAATCATCC         TCTCTCTAAGACTCT 100 35
        osmB  394631 ..  394654 +  -6.7   -4.4078   AAAATTGACTTTTAT          GCCACGG TAATTTACAC CCGTGGC           TTTTCATTAACCGCC  74 113
        ribA  399538 ..  399548 +  -8.2  -5.19212   TTTCCCGGCAATCAC                 CGCC AGC GGCG                 TTTTTTCCTGCTGGT 100 463
IUJ39_RS02100  407267 ..  407283 +  -4.3  -4.56597   GCGTTGCGCTTATCA              GGCCTCC GAG GCAGGTC              TTTTTCCAGGCCGGA  69 144
IUJ39_RS02110 NONE
        cobO  409954 ..  409995 + -13.2  -2.73483   TATTAATGTAGGCCG GATAAGGC-GTTTGCGCCG TCATC CGGCATAAACAGCCTTATC TGATTGCGCTACGCT  85 35
        trpL  414984 ..  415002 + -10.2  -5.40072   GCCAAAAGATACCCG             GCCCGCCT GTG AAGCGGGC             TTTTTTTGAACAAAA 100 45
IUJ39_RS02155 NONE
        trpD NONE
       trpCF NONE
        trpB NONE
        trpA  421998 ..  422011 +  -2.3  -5.00616   TAATAGGGTGTCGAC               ACGGT TAAA ACCGA                TTTTTTCAGCAAGCA  69 459
IUJ39_RS02180  422271 ..  422292 + -12.3  -3.63744   CTTTTATCAAGCAAT           CTGCGAGTC TTCT GGCTCGCAG            TATTTTGCCCAGGAG  95 68
IUJ39_RS02185 NONE
IUJ39_RS02190 NONE
IUJ39_RS02195  424337 ..  424355 +   -16   -5.1675   TGTCATGTCCTTTTT             GACCCCGC CTG GCGGGGTC             TTTTTTCGTCACTAC 100 63
IUJ39_RS02205 NONE
IUJ39_RS02210  426549 ..  426564 +    -6  -2.80016   GCAATGCGCCGTTAA              GCGGCG CATT CGACGC               TCGTTGATGATGGAA  53 44
IUJ39_RS02215  427140 ..  427168 + -13.3   -4.6971   AATCCTCCCGTTACT        TATCGCCAGAC CGCGAAC GTCTGGCGATA        TTTTCTTCGCCTTTA 100 39
        yciA  428070 ..  428091 +  -2.2  -4.07568   CGACGCGGTGCTGCT           TATCGGGC GCGCTG GCGCGGTA            TTTTCAAACGGCGAG  56 410
IUJ39_RS02230  429013 ..  429032 +   -15  -2.94912   AAAGGATAGTCTGTT            GGGCACCG TATA CGGTGCCC             TATCTGGCTTACACA  89 41
         cls NONE
IUJ39_RS02245  431188 ..  431219 +  -5.6  -2.56596   GCGAGTAAGCGTTTT      CAGGCCGGATGGCG TTTG CCCCCTCCGGCAAG       TGCGTTAATCAGGGA  50 33
        adhE  442326 ..  442343 + -12.7  -5.56673   CTTACCGTGACAAAA             CGGCCTC AATT GAGGCCG              TTTTTTGTTGTACCT 100 53
         hns  444097 ..  444113 + -13.7  -5.83822   CGCGGTTGCTTAAAA              TCCCGCC GCT GGCGGGA              TTTTTTTTGCCTGTG 100 47
IUJ39_RS02315 NONE
        purU  448791 ..  448807 +  -2.3  -3.30969   ATTATTCTTTAATCG              TCAATAA TAT TAATTGA              TTAGCTTTAATCCGT  45 29
IUJ39_RS02325 NONE
IUJ39_RS02330 NONE
IUJ39_RS02335  449516 ..  449531 +    -9  -3.88731   TCAGGCATAAAAAAA              CCCTAC CGAA GTAGGG               TTTAGTATCCTGTTA  79 215
        narX NONE
        narL  460918 ..  460929 +  -7.2  -2.57132   ACGCCAGCAATTTGT                CGCG TCTT CGCG                 GTTATCCCAGGCCGG  57 170
IUJ39_RS02380  462940 ..  462953 +  -3.7  -4.07562   TAATCGTTTTTAACC               GCCGC CCAG GCGAC                TTTGTGTGCAGTTTC  60 235
        chaA  464921 ..  464939 +  -8.9  -3.05343   TTATCATTGCCGCCC             TCGTGGA ATTTA TCCACGA             TATTGCCCATCTGAC  62 464
        lolB NONE
        ispE  471768 ..  471782 +   -10  -3.62522   GGTAAGCTGAGCTTC               GGTGAC AAC GTCACC               TTGTTCCAGACGTTG  78 160
         prs  472865 ..  472878 +  -9.5  -5.76633   AACCCGGATCTGAAA               CCCGC TGCG GCGGG                TTTTTTTGTCTGTAA 100 44
        dauA  474714 ..  474736 +  -6.3  -3.99324   GGTTAGCTATGACGA          CGATTGTCGC TACG GCGGCAA-CG           TTTGTCATAGTGACG  66 83
         pth  475844 ..  475871 +  -9.8  -2.94099   AGGCGCAATAACCAG        TGATGTGCGGCA TTTT TGCCGCACGCCG         TGTATAATAGGCGAA  70 30
        ychF  477110 ..  477127 +  -9.9  -4.62984   GAAAACCCTATAAAA             TCCATGC TATT GCATGGA              TTTTATGTATCATAG  91 88
IUJ39_RS02515  490120 ..  490132 +  -5.5  -4.45117   AATAGGAATACCATC                GGCTT ACC AGGCC                TTTCTTTGGACTATA  72 308
IUJ39_RS02520 NONE
        hyaB NONE
        hyaC NONE
IUJ39_RS02535 NONE
        hyaE NONE
IUJ39_RS02545  496319 ..  496336 +  -6.3  -2.86773   GCTCTCAACAGGAAC             GTAACCGG TGT CCGG-TAC             TGATTAGCTTTTTAC  55 42
        appC NONE
        appB NONE
        cbdX  499178 ..  499209 +  -6.5  -5.36364   CAACAATAAAGAGGT      AAACCGGGGCCAG CGCCGT CTGACTCCGGTTA       TTTTTATCTTTTTAC  91 32
IUJ39_RS02565  500866 ..  500883 + -11.3   -5.4492   TTTATTGTGCTGAAA             TCCACGC CCCG GCGTGGA              TTTTTTGTCTGTATA 100 50
IUJ39_RS02570  502811 ..  502830 +  -2.1  -2.62192   GCCAGGCCGGGTCAA            CGCTTAA ACATCC TGAAGCG             GTTAGTTGCGTCGCA  39 68
        ycgR  504472 ..  504482 +  -8.2  -4.68593   GGATCAACCCCCCAT                 GCCG CCC CGGC                 TTTTTCACTGATGGG  88 505
        ldcA NONE
IUJ39_RS02595  507930 ..  507947 +  -4.7  -3.75024   ATCGGCATAACCCGC             CGCGACG ATGC CGATGCG              TTGTTCCTGATGCGC  58 354
IUJ39_RS02610  512151 ..  512163 +  -4.8  -3.76492   AGTGGCGGCCAATGC                GGGT GTATA ACCC                TTTCATGCCGTTCAG  58 272
        nhaB NONE
        dsbB  515113 ..  515128 + -10.4  -5.82316   GGTCGTTGATACGCA              CGCTCC TTCG GGAGCG               TTTTTTTTGCCTGAT 100 32
IUJ39_RS02630  515980 ..  515994 +  -5.6  -2.63723   CCCACTAAAATCAGG               CGGCTG CAT CAGGCG               GTTGGTTAGTAGCAC  50 449
        minC  518878 ..  518890 +  -4.9  -3.29973   ACAACGCTTTGACAG                TTCAA CCG TTGAA                TTGATCCCTTTTTAA  54 9
        minD NONE
        minE  520026 ..  520055 + -10.9  -5.54192   GGGAAAATTCCTGGA       TTAAAAAGGCAGA AGAA TCTGCCTTTTTTA        TTTTTTTGCGTTGCT 100 51
IUJ39_RS02700  527226 ..  527251 +  -6.2  -3.30124   GCGCTAATTATTTCA         CGCTACCTGGC GGTAA GCCAG-TAGTG         TTGTAACGAGTCAGG  59 249
        pabB NONE
IUJ39_RS02715 NONE
        sdaA  530861 ..  530889 + -13.9   -5.1615   GCGTTAATTCCCTCC        CTTCGCCCATCTG CTA CGGATGGGCGAAA        TTTTTTGCCTCTTAC 100 53
IUJ39_RS02725  532593 ..  532607 +   -10  -2.68778   ATAAGCCAAAGCAAT               CCTCTG CAT CAGAGG               CTATTATTCCTCTTC  70 37
        manX NONE
IUJ39_RS02740 NONE
IUJ39_RS02745  537342 ..  537359 + -14.1  -6.23317   GCTGTTGTACACTAC             CGGGGCC AAAC GGCCCCG              TTTTTTTATTTTTCT 100 42
IUJ39_RS02750  537893 ..  537908 +  -6.2  -4.19177   TATTTCGAATCATAA              TATAGC TAAG GCTATA               TTTCTATTGACCAAT  70 76
        mntP  539090 ..  539116 +  -5.1  -4.07568   ATGATGCGGCCCCGG         CCTGGCGGT AACGACCCA ACCACCAGG         TTTTACCACGCGCGC  65 298
IUJ39_RS02790  543728 ..  543750 +    -7  -5.44721   ATATGTTATAAAAAA           GCAGATGC ATTTTTC GCGTCTGC           TTTTTTTAACGTCAT  91 183
IUJ39_RS02800  546126 ..  546143 +  -9.1  -4.90906   TCAGGCGTAAAAAAA             GCGCGTT ATTC GACGCGC              TTTTTCATGTTGTCA  93 31
        yebS NONE
IUJ39_RS02830  554613 ..  554638 + -12.5  -4.46926   CCACGTTAAACGCCC         GGCTCCGGCGT ACTC GCGCCGGAGCG          TTTTATGCTACACTG 100 32
        rsmF  556155 ..  556168 +  -3.7  -3.09327   CCGCACTTTTTGACT               GGCGC TTTT GCGCG                TGTTGACTACGCTGA  47 57
IUJ39_RS02840  556489 ..  556504 +  -8.2  -4.34486   CTGACGCGAAAAGAA              CCCGTC GCCA GGCGGG               TTATTTATTCTTCCT  79 37
IUJ39_RS02845  557099 ..  557116 +  -2.7  -3.42197   AAGCCGCTGGCAAAG             GGTGAAA AGCA TTTCAGC              TTGTACAGTTTGTTC  49 345
IUJ39_RS02865 NONE
IUJ39_RS02870  561084 ..  561104 +  -9.7  -3.23572   CACATAGCGGAATGC            CCGGCTACT GTA AGTAGCCCG            TATTATACGATCAGT  72 129
IUJ39_RS02905  567632 ..  567642 +    -4  -3.18433   ACTACATTATAAGGC                 GATT CTT AATC                 TATGCTTTTTAGAAT  48 77
IUJ39_RS02910 NONE
        exoX  569330 ..  569347 +  -5.5  -3.70068   TGTGGTCACTAGCAG             GTGCGGA TAGT TCTGCGC              TTTGACATTGTCATA  58 292
        purT  574158 ..  574171 +  -8.1  -3.30124   CCATAGCCTGATGGC               GACGC TAGC GCGTC                TTATCAGGCCTACAG  65 45
IUJ39_RS02960  579735 ..  579747 +  -3.4  -4.25104   GGATCAATGTTCACG                CAAC ACCAA GTTG                TTTTAGTCAACGGAG  60 114
         pyk  581267 ..  581292 + -14.9  -4.49958   CAGAGGGTGTCGACA         TAAAGCCTCTC TTTC GAGAGGCTTTA          TTTATTTGATAGGAT 100 81
        znuC NONE
        znuB  586286 ..  586313 + -10.6  -3.39668   GAGCTGAAGTTACAA        TGCCGGATAAGCG TAG CGCC-ATCCGGCA        TTATCAAGTTTAAGG  80 34
IUJ39_RS03025 NONE
IUJ39_RS03030 NONE
IUJ39_RS03035  593842 ..  593856 +  -4.2  -3.50746   TTTCTCCCTGTATTA               GCGC ACAATAC GCGC               CTTTATTTTTCCCGG  52 25
        cmoA NONE
        cmoB  595604 ..  595616 +  -3.3   -3.3422   CCGTGAGGGTATGGA                GGGGC TGC GTCTC                ATTTTTCGCCAAATG  48 35
        argS  599157 ..  599185 + -20.4  -5.07486   TCGTTAACTTAATCA        GGCCTGAGTCCG TTACC CGGACTCAGGCC        TTTTTATTGCCACTG 100 49
        mrdA  601239 ..  601250 +  -7.2  -3.30124   GTACTGCCGGATGGC                GGCG TAAA CGCC                 TTGTCAGGCCTGCAC  63 71
IUJ39_RS03175 NONE
        uspC NONE
IUJ39_RS03205  629921 ..  629942 +  -8.8  -2.64616   AACCATTCATCGCCA           GAAACGGT AGCAAC ACCGTTTC            TGGTCTGCATGCCAA  63 410
IUJ39_RS03220  631329 ..  631348 +  -6.4  -4.69048   CGTCTGGTCGCTATT            GCCAGC-CT CTG GGTGCTGGC            TTTCTTTACTTTTAT  78 83
        ftnA  632131 ..  632159 + -12.6  -3.13403   AATCCGACGCTTTCC        TGTACGGTGAGA TGTAC TCTCACTGTACA        TATTAATGGCGGCAG  86 39
        tyrP  634106 ..  634123 +  -2.7  -3.40307   CGCTTCCGGACTCAT             TTTATCC AGCA GGTTAAA              GTTTTCTTCAGTGCC  47 292
IUJ39_RS03290 NONE
IUJ39_RS03295  642024 ..  642048 + -14.3  -2.88054   CCAGTAGTAAAAAAA          CGGCTGTAAGC GTC GCTTTCAGCCG          GTTTCGCTTCTGGCG  89 34
        fliD NONE
        fliS NONE
        fliT  653465 ..  653477 +  -4.7  -3.41726   ATCACATCGAAAATC                CCGAC GAA GACGG                TATTGTTAAGATCTT  52 396
        yedE NONE
        yedF  655861 ..  655887 +   -13  -2.60508   CAGAAATAAGCGCAT         ACTCCCGCTGTA CGT TACGGCGGGAGA         CCTTTTTACGACATA  84 32
IUJ39_RS03380  656602 ..  656635 +  -9.5  -3.11192   TTGCCTTTCCGCGCG     CCCCCAGCCACTTAC TTAT GTAAGCGCCTGGGGA      TTCGCTGCTGATGTG  71 119
        fliF NONE
        fliG NONE
        fliH NONE
        fliI NONE
        fliJ NONE
        fliK  663624 ..  663638 +  -2.8  -3.96148   GTAGCATGATTATCC               GCGT CTTTTCC ACGC               TTTGTCGTGGACAGG  54 49
        fliL NONE
        fliM NONE
        fliN NONE
        fliO  665950 ..  665973 +  -2.2  -2.56982   GAAGAGCTTACTCAA          GCGTTCCGGG AGAT CCTGATGCGC           CGTTTGTTATTCCTT  39 7
        fliP NONE
        fliQ NONE
        fliR NONE
        rcsA  668981 ..  668993 +  -9.1  -3.54516   TTCCGCGTCTGGCAG                CGCCT TGT AGGCG                TGTTTGCTGGTTTTC  73 313
        yodD  669486 ..  669510 +  -6.4  -3.44274   CAACGCATGTGTTGT          CTGGAAGCGA CGGGA TCGGTTCCGG          TTAGTGTTCTACTTC  60 229
IUJ39_RS03470  670862 ..  670874 +  -3.3  -3.28924   AGACGCTTTTTCAAA                CAGTG CGC CACGG                TTATAGAGACGCGTC  47 481
        yedA  674547 ..  674583 + -10.2  -3.02144   ATGAATACCCTGGGT   GTCGATCTGC-GCGCTG GCGC CACCGCCGCAGATCCAC    TCTTCCAGGCGCTCC  69 41
        pipB  681620 ..  681634 +  -5.8  -4.68384   AAGAGTATTGAAACA               GAAAAA TAC TTTTTC               TTTTATTAAATAAAT  74 119
IUJ39_RS03560  685126 ..  685136 +  -6.8  -2.97903   CTTTGCGATCATATA                 CCAG TAC CTGG                 CTTTCCGTTTTATGT  56 184
       sspH2  693401 ..  693428 +  -2.8  -3.86252   GCTTTTTTATCGTTA        GGATATAAATAA GAAA TTATTTAATTCC         TTATGTTTACTAAAA  54 263
IUJ39_RS03630  699247 ..  699263 +  -5.8  -4.40199   TCAGTAATATTTGAG              GCCTTC TTATT GAGGGC              TTTATTCCTATTTTT  70 452
IUJ39_RS03635  701296 ..  701313 +  -9.8   -3.2115   AAAAGTCATCCTCAA             GCCGGG AACTTA CCCGGC              TTGATCGCTGCTTTC  72 54
IUJ39_RS03645  702541 ..  702559 +  -4.4  -3.14132   CGCGTCAGTCTGGGC             GCGTATCC GCT GGTTTCGC             TTGCTGGAGCAAGGC  50 349
IUJ39_RS03655  703558 ..  703588 + -12.6   -4.8143   TCTTTCTGTGAAAAA       GAAAAATCGGCGCA TAA TGCGCCGACTTTCC       TTTTTAAATTGTTCA 100 57
IUJ39_RS03660  705256 ..  705269 +  -5.3  -3.66018   ACGAATGACCTGCGC               GCTTT TCGT AAAGC                TTATTCGGATGCTGC  57 122
IUJ39_RS03665 NONE
IUJ39_RS03670  712439 ..  712467 +  -8.9  -4.57073   AACGTGGGTTATTCT        TGATCAGGCCATG TGT TATGGCCTGAATA        TTTTTAAACCGGATA  88 55
IUJ39_RS03680 NONE
IUJ39_RS03685  718430 ..  718463 +    -3  -4.18644   TATCGCTGATATCTC     CCCGGCGCAG-GTCC TATTC GGAAGCTGCGCCGCA     TTTCGTTTATCTGAT  58 32
IUJ39_RS03690 NONE
IUJ39_RS03695  719383 ..  719411 + -12.4  -5.24129   TTTATGTAACCTGAA        CGGGGGCGCTGT CACAT ACAGCGCCCTCA        TTTTTTATAACGACA 100 46
IUJ39_RS03700  721408 ..  721435 + -11.4  -4.67038   CTTTCAATGCAGAAA        CGCAGATCC-GGT TCA ATCAGGATCTGCG        TTTTCATTTTCAACA 100 488
IUJ39_RS03705 NONE
        tnpB NONE
IUJ39_RS03715  723990 ..  724003 +  -3.8  -3.22476   TGAATATACGCCGCC               CGCA CGCTGT TGCG                TTCCTGATGGCTCAT  47 121
IUJ39_RS03735  727185 ..  727206 +  -8.7  -4.04922   GCCAATTTAAGGGAA           GCAGACGTT CACT GGCGTCTGC            TTTCTGCATTTCTGT  78 37
        pduA NONE
        pduB NONE
        pduC NONE
        pduD  756453 ..  756463 +  -8.2  -3.53444   AAACCCGCAAGAACT                 GCGC GTG GCGC                 TTTAAAAAAGGATAC  67 10
        pduE NONE
IUJ39_RS03890 NONE
IUJ39_RS03895 NONE
        pduJ NONE
IUJ39_RS03905 NONE
IUJ39_RS03910 NONE
        pduM NONE
IUJ39_RS03920 NONE
        pduO NONE
        pduP NONE
IUJ39_RS03935 NONE
IUJ39_RS03940 NONE
        pduT NONE
        pduU NONE
        pduV NONE
        pduW NONE
        pduX  769891 ..  769907 +    -3  -4.30576   GATGTAATCATCAAC             GCGATCT TCAT AG-TCGC              TTTTCATACTGGCGA  62 170
IUJ39_RS04005  778739 ..  778749 +    -4  -3.03124   CAAATATTTGTCAAT                 TAAC GAT GTTA                 TCTTCGCAGGTGAAA  47 229
IUJ39_RS04010  780466 ..  780514 +  -4.6  -4.07885   CCTGCGGCAGTGGTC TCCGGTGTTG-GCGTGCCGGTC AGTGCTG GACTGTCACGCACTGCAC-GGA TTTTGGGCCAGAGTC  61 164
        sbcB  782255 ..  782283 + -16.1  -3.82824   GCCGGATAACAGAGA        AAAAACCGGAGGC ACT GCCTCCGGTTTTG        TTATTGTCGATAATA 100 109
        hisL  786017 ..  786043 + -22.4  -5.75342   TGAACGCATGAGAAA         GCCCCCGGAAGA TCA TCTTCCGGGGGC         TTTTTTTTGGCGCGC 100 66
        hisG NONE
        hisD NONE
        hisC NONE
        hisB  790445 ..  790459 +    -5  -2.71011   TCGAAAGGAGTGCTG               TGATGA ACG TCGTCA               TCCTTGACACCGGCT  49 23
        hisH NONE
        hisA NONE
        hisF NONE
       hisIE  793150 ..  793164 + -12.8  -5.16237   TAAGTGTAAAAAAAA               CCGGGC GTT GCCCGG               TTTTTTGGTGGAATT 100 38
IUJ39_RS04270  837527 ..  837539 +  -7.7  -3.40403   CACGCGGAGGTTAAA                TTGCG TAT CGCAA                TTCTGCTCAACCAGG  62 357
IUJ39_RS04290  844109 ..  844142 +  -7.3  -3.53012   GCGCCAGATGAATCA     GCGCTTCGGCACGCCG ACG CGGCATCCCCA-GCGC     TTTCAGAGCCAACGG  61 319
        yegD  846313 ..  846332 + -11.4  -4.00532   CCCTTTCCTTATTTG            GCCCCTTC CTCG GGAGGGGC             TTTCCTGTTTCAGCG  91 200
        mdtA  847812 ..  847822 +  -6.8  -3.08679   AAAAAGGAGCGCGCG                 CCTG ATG CAGG                 TATTACCTCCGGGCA  58 21
        mdtB  850933 ..  850944 +  -3.6  -4.66264   CGCCATAAAGAGGAG                GCGT AGAT GCGC                 TTTTTCGCCCTTTTC  66 20
        mdtC  854461 ..  854481 +  -5.5  -4.59853   CATGTATGGCGGTTA            TTATCGC GCTACCG GCGATAA            TTTTTGCCCGCTTGC  74 467
        baeS NONE
        baeR  856777 ..  856797 + -13.3  -3.35438   CTCCTCCAGCTCCAG            CCGCCTCAT CAG GTGAGGCGG            TTCTGACCTGTCATC  95 131
        yegQ  858325 ..  858350 + -13.4  -4.62085   GGAACCACCTCATTG         GCCTGCGTAA TCTCCC TTACGCAGGC          TTATTTTTTACGCGT 100 162
        yegS  861209 ..  861232 + -12.4  -3.85698   ATAATACGTATCGCT          GACCGGATGC GCCC GCATCCGGCC           TTTCTCCACCAGGAC 100 40
        rcnB  866165 ..  866185 + -11.2  -2.76225   ATCGATAAAAAAGCA            CACTCTCC GTTAA GGAGAGTG            TGCTTAGCATTGATT  77 33
        metG  875101 ..  875118 + -12.7  -5.27923   TGAAATAAACAACCA             GCCGGAG CATG CTCCGGC              TTTTTTATCAGGTTA 100 33
        mlrA NONE
IUJ39_RS04455  879784 ..  879795 +  -3.6  -2.73364   CGACCTGATACAACT                GCTG GCGA CGGC                 TCATTCCCATACCGC  43 266
         dld  887833 ..  887849 +  -6.5   -5.2197   GCACTGGCGCTGGCT              GCCGC CATTTGC GCGGC              TTTTTGCTTTTTATA  93 127
IUJ39_RS04500  890221 ..  890264 +  -5.8  -4.46233   GAGGCCCGTTAAACC CGATGGTATCCGGATGGC ATAACGCC GCCATCCGGCGCCCGGCG TTTATTTCGCGTTGA  72 29
        yohP  892936 ..  892968 +  -9.8  -2.92102   TGATTTTCTGATGCC     TGCGCCGGGGAG-CG ATAA CGTCTGCCCGGCACA      CTTTCTGGAAGCTGT  70 30
IUJ39_RS04555 NONE
IUJ39_RS04560  899735 ..  899745 +  -6.8  -5.01042   GGTTAAAATTTGCGA                 TGCG TAG CGCA                 TTTTTCATTTAAGTT  82 59
         cdd NONE
IUJ39_RS04570  903038 ..  903048 +  -2.4  -4.90778   ACATCATTGTATCTG                 ACGC AAC GCGC                 TTTTATTTACATAGA  69 43
        sanA NONE
IUJ39_RS04585  905154 ..  905175 +  -6.6  -2.87132   CGGAAAAATAACGCG           CT-TGGCGC CGTCT GCGCCAGAG           TCTGTCCAACGGAAA  56 433
IUJ39_RS04595  906913 ..  906923 +  -2.4  -5.13354   GATGTCACTCTACAG                 GCAG TAG CGGC                 TTTCTTTTTTATAGG  71 516
IUJ39_RS04615  908609 ..  908625 +  -4.3  -2.87931   GAAAAATGCGTCGGC              TGTCTGC TGT GCGGCCA              TGTCTGCCCGGTAGC  48 136
        fghA  916917 ..  916929 +  -9.1  -2.74012   ACATAATGAATTTTC                CAGCG CCG CGCTG                TAATTCACCTCCTCC  66 35
        serB  919740 ..  919751 +    -3  -2.59431   CGAATTGCTTCTTTT                TCTT ATTG AAGA                 TGAATTATAACGCGA  40 4
IUJ39_RS04675  921121 ..  921153 + -19.2  -2.98823   ATCGTTTATAACATT      CTGGCGACAGCGGC AAAAC GCGGCTGTCGCCAG      TCTCTGTCAGAAACG 100 30
IUJ39_RS04695  927239 ..  927249 +  -4.6  -2.72263   TACGTTCGCAATGAA                 CCGT ACA GCGG                 GTTTAACAGGAGTCT  47 75
         nfo  928204 ..  928244 +  -5.4  -2.70298   TCGCAAAACGCAATC ACATGCCGGATGGCAACGC CAAA GCATC-CTATCCGGCATGA  CTTATCATTACGCAA  50 104
IUJ39_RS04715  931697 ..  931712 +  -4.6  -4.07885   CCGCTTTTGCCGCGA              CTTCCG TTTC CGGACG               TTTTACGAAAGCGTA  61 231
        setB  937489 ..  937504 +  -7.6  -4.25859   AAGAAACGACTAAAT              CGGTTA AGGA TAACCG               TTGTTTTACATTGAA  76 515
        yeiP  939472 ..  939491 + -13.6  -3.48671   GAGCGCAACCTGTCT            GGGACAGC GCAT GCTGTCCC             TTAGTCTTTAGTGAT 100 85
IUJ39_RS04760 NONE
IUJ39_RS04765  941795 ..  941830 + -15.7  -4.01853   CCTGTGTAATTAACA    TTACCTTCAGCGATG GTTTTG CATCGTTGAAGGTAA     TTTATGATGATATTC 100 41
        mepS  942817 ..  942834 + -11.3  -3.04089   GAAACGACATAAAAA             GCACTGC TTCG GCAGTGC              GTTTACTTATTACCC  79 77
IUJ39_RS04775  944677 ..  944689 +  -3.3  -2.97902   TAATGGATTCACATC                AGACG CGA CGTCA                CTTATTATTCAGTGA  44 55
IUJ39_RS04780 NONE
IUJ39_RS04785 NONE
IUJ39_RS04790 NONE
        yejF  950430 ..  950448 +  -6.7  -3.36878   AGGAACTTCAATGTC             GCTTAGC GCCTG GCTGAGC             TTATGCATCACTGAC  59 176
IUJ39_RS04815  954907 ..  954936 +  -4.9  -3.61517   GCAAAGCAGATCACT       TACCTGTTGCTGG GTCG CCTGTAGCAGGAA        TTATTAAAGAGAGAT  57 101
        rplY  955250 ..  955289 + -26.8  -5.05782   GCGTAATCGCCAAAA  GGGCATAAAAAACTCCGC TTCG GCGGAGTTTTTTATGCCC   TTTTTTGGCCTCGGT 100 35
IUJ39_RS04830 NONE
        yejM  958626 ..  958657 +    -5  -2.73875   ATGAATCAGTTAGCA      CCACTTCCCCTTGC ATTC GCGATGGAAAGCGG       TAGTATTAGCACCCA  49 47
IUJ39_RS04840  958802 ..  958826 +  -9.9  -5.17353   GAAACCCCTTAAAAA          CCCGCATTCTC TCA GAGTTTGCGGG          TTTTTTAATGCCTGT  93 73
IUJ39_RS04845  959820 ..  959834 +  -2.8  -3.05521   CCCATACCCTAATTA               GGGTAA AAT TTACGC               TCTTGGCAATGTGGT  43 197
        narP  960885 ..  960895 +  -8.2  -4.62069   CCGCATAGCCCAGCG                 CCGC ATC GCGG                 TTTTTCGGATCCAGC  88 354
         eco  973685 ..  973697 +  -4.7  -4.46072   CGCCTCCCAGTTTGT                GCCGC GAT GCGGG                TTTCTGTTTATTGGG  69 73
IUJ39_RS04935  975278 ..  975298 +  -6.9   -4.4715   GATCATCATGGCTGA            TGGCGAAAA TGG TTTTCCCCA            TTTTCTGCATTAACG  77 221
        rcsD NONE
        rcsB  985157 ..  985178 +    -8  -2.90194   CGTGTTTTACGTACC           CGCTCGGCG TACAC CGCC-AGCG           TCTGCTTCAACACAT  61 149
        ubiG  991691 ..  991701 +    -4  -6.24157   GAAATCAGCACTCGA                 TCAA ATT TTGA                 TTTTTTTTTATGAAT 100 105
        nrdA  994279 ..  994319 + -14.2  -2.60496   CCGGGTGGCGCTACG  CTTACCCGGCCTACAA TTGCACGGC TTGTAGGCCGGATAAG  GTGTTTGCACCGCCA  87 50
        nrdB NONE
        yfaE  996214 ..  996225 +  -5.8  -3.06183   ACAGCAGAAAATTAC                TGGC CGCC GCCA                 TTAAATCCAGCTCAC  53 488
IUJ39_RS05010  998041 ..  998075 +  -6.4   -3.2375   GCCGAACATTGCGGT    AGGCCGGATAA-GGC ATTTAC GCCGTCATCCGGCCC     TTCACTTCTACGATG  57 83
        glpA NONE
        glpB NONE
        glpC 1005015 .. 1005044 +  -2.8   -3.5947   GTAGCATGACAGGTA       GCGAAGTGACTG ATTATA CAGTCATATCAC        TTGTATCTACGCGTT  50 171
        sseL 1006389 .. 1006405 +  -6.5  -2.66435   TTCAACCACGTTTAT              CCAGCCA TGC TCGCTGG              TCATATCCTCGCCAT  50 154
IUJ39_RS05065 NONE
        arnT 1013081 .. 1013116 +  -3.8  -4.12532   CTTAGTCTCAGCTAC    GCGCTTGTCAGGGTTG TTAC CCGCTCTGTAAGGCGC     TTTCTGTCTAAAAGC  59 499
         rbn NONE
IUJ39_RS05135 1023618 .. 1023647 + -12.3  -5.00339   TTACATCAGGCAATA       AAAAAACCCGCTT CGTG AAGCGGGTTTTTC        TTTTTACTTATTGCT 100 122
        alaA 1042439 .. 1042462 +   -14  -3.21062   ATCAATAATCTTAAA          TTCAGGCTAC TTCG GTAGCCTGAA           TTGCATCTTCGTCTC  93 33
        yfbR 1043459 .. 1043469 +  -2.4  -3.04144   CGGCGCCATCAGTAC                 CGCC GTT GCCG                 TGTTAGAAATAAACA  42 360
        ackA 1048364 .. 1048391 + -16.4  -4.36914   CTGACTGCCTGATAT        CA-CACCGCCAGC CTA GCTGGCGGTGCTG        TTTTGTAACCCGCCC 100 29
         pta 1050695 .. 1050711 +  -2.1  -5.28481   GGCATTCTGCTATTT              ATCCTGC AAA GCCGGAA              TTTTTTGCTTAACTG  74 139
        yfcC 1052411 .. 1052422 +  -4.4  -4.83615   AATCGCTGCGGCGGT                GAGT CCGT ACTC                 TTTTTGTAAGAAATC  75 116
IUJ39_RS05285 1057654 .. 1057668 +  -6.4  -4.66833   TCTTCCGGTTTCTCC               TGAAGC GCG GCTTCG               TTTTTGGCGTTGCGG  77 56
        yfcG 1060391 .. 1060407 +  -2.2   -2.6381   TAGGGAAGAGGAAAA              CCTCAA TACTC TGGAGG              TCATATGCAGATTCT  39 134
IUJ39_RS05310 1061323 .. 1061340 + -12.7  -3.02684   CCGACGCCTAATCCC             GCCCGGT AAGC ACCGGGC              CTCTTTTATTTCAGC  83 43
IUJ39_RS05365 1073778 .. 1073809 +  -6.4  -3.06501   CGAATTTCCGGCGCG      GCGGACGCCAGGTA AACC TTCTTCGCGCCCGC       TTCCCTGGCCATCTC  53 393
         flk 1083741 .. 1083762 + -14.5  -3.57561   CGCCAAGCGCCGTAC           CGCGTACCT GGGA AGGTACGCG            TTTCACAACTTCCAC 100 192
IUJ39_RS05430 1085851 .. 1085870 +  -3.6  -4.63218   ATACAGTTAAAGCAT            TACGTCAT TGCT ATTACGTA             TTTTATTAACAGGAA  66 154
IUJ39_RS05435 NONE
IUJ39_RS05440 1086886 .. 1086909 +  -7.4  -3.66356   CTACGCACTATTGAC          GAGTGAAGCG ATAT CGCTTTACGC           TTTCAGCTTACGCAT  67 134
        mnmC 1090382 .. 1090417 +  -6.9  -4.60924   CGCTTTGACTAACGC   CTGATC-GCG-CGGCGA CAGT TCGCCGGCGCCGATCGC    TTTTTCCAGACTTTG  81 124
        smrB 1095614 .. 1095625 +  -7.2  -3.30124   AGATCGCCGGATGGC                GGCG CAAG CGCC                 TTATCCAGCCTACGC  63 45
        fadL 1102006 .. 1102024 + -14.6  -5.33405   GAAAAGGATCAAAAA             GGTGAGCG TAA CGCTCACC             TTTTTATTTACTGCC 100 50
IUJ39_RS05520 NONE
IUJ39_RS05525 NONE
IUJ39_RS05530 1105823 .. 1105847 +  -3.5  -4.14627   ATCAGCATTGACTTT          GTAGTCCAG CCAGATA CGGGACTGC          TTGTTTCTGTCGACC  60 349
IUJ39_RS05565 1112566 .. 1112587 + -13.1  -4.31943   CACATCCTTAATCAT           GGGAGTGTT AATA AACACTCCC            TCTTTTTTATCTAAA 100 45
IUJ39_RS05745 NONE
IUJ39_RS05750 1135595 .. 1135612 +  -9.8  -4.88918   CGCCCATAATCTCAA             CCCGGC CACAGT GCCGGG              TTTTCTTTGCCCTAC  93 32
IUJ39_RS05760 NONE
IUJ39_RS05765 NONE
IUJ39_RS05770 1137016 .. 1137030 +  -9.2   -5.4505   CCTCTCATCTAATCA               GGTCGC AAT GCGGCC               TTTTTTATTGCAAAA 100 29
IUJ39_RS05775 1138535 .. 1138555 +  -7.5   -5.0538   CCCTTGATGTTATTT            GCCGCTC GCAGTCA GGGCGGC            TTTTTTCGCATACCA  86 136
IUJ39_RS05780 NONE
         kil NONE
IUJ39_RS05790 NONE
IUJ39_RS05795 NONE
IUJ39_RS05800 NONE
IUJ39_RS05805 NONE
IUJ39_RS05810 NONE
IUJ39_RS05815 NONE
IUJ39_RS05820 NONE
IUJ39_RS05825 NONE
IUJ39_RS05830 NONE
IUJ39_RS05835 NONE
IUJ39_RS05840 NONE
IUJ39_RS05845 1143934 .. 1143947 +  -5.2   -5.4833   CCAGACCTACCATCA               CCGC CATAGA GCGG                TTTTTTATTGCCTGA  93 163
        torI 1144581 .. 1144591 +  -8.2  -3.25823   GTCGTTCCTTCTCCC                 CCGG TTG CCGG                 TTCATGTCAACGCAA  64 407
        lpxP 1157549 .. 1157566 + -11.3  -4.75372   ACTTTTAGCGCCATG             CCTCCTG GTTA CAGGAGG              TTTTTAATGCGTCGT 100 113
        ypdK 1157955 .. 1157973 + -14.6  -4.28487   CAATGCAGAGAAAAA             CAGGAGCC CGG GGCTCCTG             TTTGCTTTTCTACTC 100 43
IUJ39_RS05935 1160671 .. 1160703 +  -8.4  -2.60808   CAATAACAGGCCCCT     CGCCGGATGGCGGCG TAAA CGCC-TTATCCGGCC      TACATTATCACTCGT  63 35
IUJ39_RS05970 1169940 .. 1169957 +  -6.9  -3.34962   ATTATACCGCTGGGC             TGCGCCG TGAA TGGCGCG              TTCTACGGTATAGCC  59 282
        mgrA NONE
IUJ39_RS05985 1172987 .. 1173022 +  -4.1   -3.6422   GAGTTTTCTGCTGAA    TAACAG-CCCGATG ACAGAAACG CATCGGGCCTGCTA    TCTTTTCAGCCGCTA  53 39
        nupC 1175855 .. 1175869 +  -9.2  -5.61596   TTTTTCATTCAGAAA               CCGGGG ATA TCCCGG               TTTTTTTATGCCGCT 100 59
IUJ39_RS06015 NONE
IUJ39_RS06020 1179443 .. 1179471 + -13.3  -3.82946   CAGACTAACAAATAA        TAAACGGCAGG CGTCTTC CCTGCCGTTTA        TTCTGTTTCAGCTCG 100 33
IUJ39_RS06030 NONE
IUJ39_RS06035 1181373 .. 1181383 +    -4  -3.32844   CACTTTCTCACCAGC                 TAAG TTT CTTA                 TTGTGAAGTACCGAA  50 39
IUJ39_RS06040 NONE
IUJ39_RS06045 1181567 .. 1181581 +  -8.5  -5.24989   CACCAATGTAAAAAA               GCGCC CTAAA GGCGC               TTTTTTGCTATCTGC  95 36
IUJ39_RS06055 1183755 .. 1183780 + -11.2  -2.77781   AAAGCGGGCGCTTCA         GGGGCTG-CAC CAGTT GTGTCAGCCCC         TCGGTTTTAATCAGC  77 39
        cysZ 1188037 .. 1188062 +  -6.9  -3.10715   GTAAAAATGTATAAA         TAAGGGATGGC TTAT GCTGTCTCTTA          TTCCATACTGATAAC  58 42
        cysK 1189184 .. 1189199 +  -6.8  -5.26316   AAAATGCGTAAAAAA              GCACCT TTTG GGGTGC               TTTTTTGTGGCCTGC  87 54
        ptsH 1189784 .. 1189811 +    -2  -4.11692   GTCAAACTGATGGCT        GAACTCGAGTAAG ATT TTTTC-CGGGTTC        TTTTAAAAATCAGTC  55 14
        ptsI NONE
         crr 1192141 .. 1192158 + -12.7  -5.66684   TGCCGCAGTGAAGAA             TGGCGCC GATT GGCGCCA              TTTTTTTATCCGTTG 100 45
        ptsJ 1195039 .. 1195059 +  -8.1  -2.87132   GTTCGCAGCTCATTG            GCGAGGCGC TGG GCGCCGCGG            TGTGTCAAAGCCCGG  61 331
IUJ39_RS06155 NONE
IUJ39_RS06160 NONE
        murQ NONE
        murP NONE
       pbp4b 1207919 .. 1207929 +  -8.2  -3.72576   GCAAAATAGTAGCCG                 CCGG TCA CCGG                 TTTGGTGAAGCGCAG  72 128
        amiA NONE
        hemF 1212566 .. 1212592 +  -7.9  -3.53012   GCCAGAATCCCCACT         GCATGGCGGCG TCTTT CACCGTCGTGC         TTTGCGACCAGGGGC  64 243
IUJ39_RS06295 1228740 .. 1228758 + -11.7  -3.80018   GATAAGTAAAATTAG             CCCGCCT CGTAA AGGCGGG             TTATTCATATATCAC  93 32
         tal NONE
         tkt 1236431 .. 1236471 +   -12  -3.05596   ACGTTAGAAAGCAGG  CTTTGCGCAGTCTGCAGA CCTGT TCTGTAGGCTGTGCAAAA  TTACCTCGCAGACTC  81 47
        narQ 1243316 .. 1243343 +  -7.6  -3.01712   AAGAACGGCAAAGCG        CCGGAAGGCCAG ATGT CAGGCTTTCCAG         TGTTGGCACAAAAAG  60 45
        acrD 1246640 .. 1246660 +    -9  -4.78237   ATCGGGCACAAAAAA            GGCGACTT TCGTT GAGTCGCC            TTTTCTTATCCCCTA  90 66
IUJ39_RS06360 NONE
        dapE NONE
IUJ39_RS06370 1248896 .. 1248927 +   -13  -3.28712   AAAAGTAACCAGAGA      CCGTGCCGGAAAGT TATC GCTATCCGGCATGG       TTCTCACCGCCGGGC  95 33
IUJ39_RS06400 NONE
         bcp 1256397 .. 1256415 + -11.6  -3.13343   GCCCATCCCGCCTGC             CGCGCCCG CGC CGGGAGCG             TTAACTACTTCACGT  77 463
        bepA NONE
        arsC 1263096 .. 1263111 + -11.8  -3.12668   CGGTTAACCTCTGAA              CGCCGC CGTC GCGGCG               TATTACAGTTTCAGG  81 34
        purM NONE
        purN NONE
        ppk1 NONE
         ppx 1271807 .. 1271833 + -15.2  -3.78022   CCGCGTAAATCGCGG         TTCAGACGCCGT GTC ACGGCGTCTGAC         TTTACTGAATCTCAG 100 33
IUJ39_RS06485 1274955 .. 1274977 +  -7.1  -2.60763   TGCGCGACTCTGGTA           TACCAGCAA AGCAC TTGTTGGTA           ATTCTGCGATATCCC  52 327
IUJ39_RS06515 NONE
IUJ39_RS06520 1281140 .. 1281157 +  -5.5   -3.1996   ATAGAATAACATCAT             GACTGCT GTAT AGCAGCC              TTAAGTTAGACTTTA  54 32
        tssE 1281829 .. 1281843 +  -2.7   -3.5511   AGTGGGGCACAATAC               GCGCC GGAAA GGGGC               TGTTTGTCAGTGCCG  48 201
IUJ39_RS06535 NONE
IUJ39_RS06540 1284286 .. 1284299 +  -3.1   -2.7806   ATGCAAAAGTCCATC               TGCTT ACAC AGGCA                ATTTGCAAGTTTCCA  43 174
IUJ39_RS06545 NONE
IUJ39_RS06550 1285763 .. 1285784 +    -6  -3.76968   AAAATCGTCTATGTG           TCATATAG GTAATA CTATATGA            TTTAATAAGTCGATT  64 14
        xseA NONE
IUJ39_RS06570 NONE
IUJ39_RS06575 1292691 .. 1292713 +  -4.8  -4.89477   AAGAGGTTGGCCATT          CTGC-GGCG CAACGT CGCCAGCGG           TTTTATTGTTCGGAA  77 277
        sseA 1315346 .. 1315361 + -10.4  -5.67967   CAGGCCACAAAAAAA              CCGCTC AATT GAGCGG               TTTTTTTGTGCTGGT 100 126
        timP 1315620 .. 1315645 + -14.7  -4.66318   AGAGCAGGTAAGCCA         GGAGGCCGCCC TGTT GGGCGGCTTTC          TTTTCTTCAGATGAT 100 30
        suhB 1325786 .. 1325824 +  -7.6  -2.64765   CTGAAGCGTTAATCG  TTCATT-CTGGCGGGAG CGTCTT TTCCCGCCAGAAATAAA   TCCCTTCTATAATTA  57 29
        asrA NONE
        asrB NONE
        asrC 1329014 .. 1329029 +  -3.2  -4.88918   GACCAGCCCACCAGC              CGCC ATAACGCA GGCG               TTTTGTTTCCACTGA  74 144
        csiE 1332352 .. 1332365 +  -2.3  -2.88544   CCGACGCTGAATAGC               CTGCC CCCT GCCAG                TATATGGCGCTAAAA  41 463
        hmpA 1336033 .. 1336060 +  -6.3  -4.43864   GAAATCGACTAAAAA        CGGGCGT-CG TCGTTAATC CGAACGCCCG        TTTTCCTCTCTGTTT  73 47
        cadC 1337754 .. 1337787 + -15.7  -4.37092   CTAAACCATGAAAAA     TAAAAGCGAAAAAAT ATTA ATTTTTTCGCTTTTA      TTTTGTGAAAAACAT 100 49
        cadB 1339472 .. 1339486 +  -2.7  -3.53012   ACCTGCTATAGCGTA               GCGGG AGGGG CCCAC               TTTACCAGGAACAAG  48 75
        cadA 1341658 .. 1341679 + -14.5  -5.00616   GAAATAAGTACCAAA           GGGAAGTGG CAAG CCACTTCCC            TTTTTTCACGCAGCA 100 34
IUJ39_RS06785 1343405 .. 1343430 +    -6  -2.60032   AATCCACCATATATT         CCGCGCCGCG ATACAG CTCGGTGTGG          CCTTTTTGACGGCCA  50 265
IUJ39_RS06815 NONE
        mltF 1353546 .. 1353558 + -10.5  -4.65895   ACATCAATTAGCGAT                CCGGC CGC GCCGG                TTTTTGCATCGCGCG 100 215
IUJ39_RS06845 NONE
IUJ39_RS06850 1357460 .. 1357476 +  -3.5  -4.10161   GTTAACGCCTCTCCC              CACAGCC GCA GGCGGGG              TTTTCCCAACTCATC  60 227
IUJ39_RS06920 1369669 .. 1369692 +    -3  -4.09685   GTTTAAAATCACTGG          CTGCCAG-GCG TCG CGCTCCGACAG          TTTTCGGGAATAGCC  58 257
        nadB 1374444 .. 1374458 +  -4.9  -3.67175   TGCGAGCAGAACCCG               GTGCG GCAAG CGCGC               TTCGTTTTCCGCAAT  55 139
        srmB 1376523 .. 1376541 + -12.4  -3.62746   GAAGAATAATGATGT             TGCCGGGT TCT ACCCGGCG             CTTTTTTCCGATAAA  95 32
         ung 1378025 .. 1378037 +  -2.6  -4.77165   GAGAGTGAATAACGC                TGGC ATCTC GCCG                TTTTATTGTCGGACG  68 29
        trxC 1379807 .. 1379827 + -14.7  -4.16943   GCGTTGTAAACGCTA            CGGGGCGCA TCT TGTGCCCCG            TTTTCACCTCTGCCA 100 32
        tapT NONE
         pat NONE
IUJ39_RS06995 NONE
        pssA 1384742 .. 1384758 +  -6.5  -4.66938   ATCCTGTAATCAAAG              CCCCG TCCTGCT CGGGG              TTTTCTCTTAGGAAT  78 32
IUJ39_RS07005 1385537 .. 1385581 +  -2.8  -3.36341   TGAAAACACACAGCG CAGCCGTCAT-AATGCCGCTG GCGA CATTGGCATGCATACCGGCTG TATTTACCAGATATT  47 459
        bamD 1398108 .. 1398127 +  -9.2  -5.72053   TACAGACAAGCAAAA            CGGCAGCC ATCC GGCTGCCA             TTTTTTATTTGGTTA 100 46
        raiA 1398723 .. 1398738 + -11.8  -4.95484   TGAGTGTATCGCCAA              CGCGCC TTCG GGCGCG               TTTTATTTCATCGTA 100 51
        pheA 1401891 .. 1401907 + -12.3  -3.10732   CCATCGTCGGACAAC              GTACCGG CAA CCGGTAC              TCTTCCAGTTGCTCT  79 195
IUJ39_RS07125 NONE
IUJ39_RS07130 1413560 .. 1413602 +  -4.9  -5.14563   AACACGGCGTCGCGT TCGCGAGTCTGG-GCTTCGG CAAG CTGAACTTCCAGATTCGCAA TTTTTTCATCGCGCG  81 507
        nadK 1414773 .. 1414793 +    -2  -3.28472   TAAAAAACCAGATTA           T-ACTGTAT TTAA ATACAGTCA            TGGTTTTTCATACAG  45 65
        recN NONE
        bamE 1417218 .. 1417235 +  -6.3  -4.07687   AACCCGATCGCCATC             CTGCACCG TAT CGGTG-AG             TTTTACCGGGCGGCT  68 275
        smpB 1418529 .. 1418557 + -13.3  -2.81905   AATATACATTTTTTG        TGACCAGCTTC TCAATAT GAAGCTGGTCA        ATATTTATATCTTAT  85 39
        bapA NONE
IUJ39_RS07175 NONE
IUJ39_RS07180 1434289 .. 1434305 +  -2.2  -2.50016   CAGTCAGCATGATGC              CGCGAT GGACG ATCCCG              ATATTCATCGTGAAC  39 29
IUJ39_RS07185 NONE
        ssrA 1435939 .. 1435964 + -16.1  -5.26316   GATGAAGTCCTAAGA         GCCCGCACGGC GCAA GCCCTGCGGGC          TTTTTTGTGCCCTCA 100 73
IUJ39_RS07210 1438864 .. 1438876 +  -2.7  -2.82529   GCTCAGGAGTAGTCA                GTGAA CAG TTTAC                CTTATATTCCATTAG  41 22
IUJ39_RS07215 1439358 .. 1439374 +  -3.7  -2.62667   AAATGACCTAGTAAG              GATATCA GAA TGAAATC              ATATTTAAGGATTGA  44 13
IUJ39_RS07220 1441342 .. 1441360 + -13.2  -4.59773   ATATTTAGTAAAAGA             CCACCTTC TGA GAAGGTGG             TTTTTGCGAATGCCC 100 33
IUJ39_RS07240 1443846 .. 1443864 +  -3.8  -4.31085   TACCCGGCAGGGTAA             GTCGCATC GGT GATGTCAC             TTTTGAATTAATATA  64 116
IUJ39_RS07245 1445494 .. 1445513 +  -5.1  -3.28712   GCAGCATCATGATAG            CAATTCA CGCTAC TGAATTG             TTATCAAAACCCACG  54 53
IUJ39_RS07255 1447485 .. 1447495 +  -2.6  -3.05384   CATGGCAGGACTGTA                 TTAA TCA TTAA                 TTAACTGAAAGGAAA  43 15
IUJ39_RS07260 1448307 .. 1448320 +  -5.3  -3.36327   CAGTGGGTTCCCAAT               GGTTA TAAA TAACC                TTATCAGTGAGATAA  54 14
IUJ39_RS07265 NONE
IUJ39_RS07270 1449036 .. 1449055 + -11.4  -5.38951   ATTAATAACAGACAG            GGCCATCC TTCG GGGTGGCC             TTTTTTATGTCCATT 100 49
IUJ39_RS07275 1449933 .. 1449958 +  -5.4  -5.07652   CCATCCATCTCTTCA         TGCCCTGC CACTAAGCAA GCGGGGCA          TTTTGTTTTAAGGAG  80 50
        radC NONE
IUJ39_RS07285 NONE
IUJ39_RS07290 NONE
IUJ39_RS07295 1451623 .. 1451648 + -16.1   -5.4492   AATGAAGTCTACTAA         GCCCGCACGGC ACAA GCCCTGCGGGC          TTTTTTGTGTCTGTC 100 218
IUJ39_RS07310 NONE
IUJ39_RS07315 1456714 .. 1456731 +  -3.3  -4.25056   AGCGTATTACGTTGT             AGACCGG TGTT CTGGTCA              TTTGTTGATACGCTC  60 311
        iroB 1458571 .. 1458602 +    -5  -2.97021   GCAGCGTAATGACAA      TATGGCGGCTGAGG CCTG CCGGTGTCGCCATA       TCTCATCTTTCACAG  50 40
        iroC 1462324 .. 1462344 + -11.2  -3.76373   AAGAAAGCCCGCAAG            CGGCTGTT CCTGT AACAGCCG            TTTAGCTATTGAGAC  91 65
IUJ39_RS07335 NONE
IUJ39_RS07340 1464991 .. 1465010 +  -6.4   -4.7254   TATTTCGGGATTATC            GATAACGG ATTA CCGGTATC             TTTTTGCTCGGAGGT  77 398
IUJ39_RS07355 1470491 .. 1470501 +  -6.8  -4.54449   TTGCAGATCCTGCCA                 CCGT TCA ACGG                 TTTTCTCTGACATCT  77 60
IUJ39_RS07360 1471666 .. 1471696 + -12.8  -4.77759   TTGTTAAAAATAAAA       TTAGGACGTAAATA TAT TTTTTACGTCCTAA       TTTTTCATAAATTCT 100 34
IUJ39_RS07380 NONE
IUJ39_RS07385 NONE
IUJ39_RS07390 NONE
        csiD NONE
        lhgO NONE
        gabD NONE
        gabT 1484104 .. 1484115 +  -2.2  -3.15544   GCAGCGTCGGATGGC                GACG TAAA TGTC                 TTACTCGGCCTACAA  44 51
        gabP 1485615 .. 1485632 +  -8.3  -2.82623   CTACGTTAGCGTTAT             GCCCGGC GCCA GCCGGGA              TGCTTCTCAGGAGAA  64 32
        csiR 1486395 .. 1486413 +  -3.1  -4.46112   CCGGATATATTTTTT            CCGG-GCT TTTC AGCATCGG             TTTATTTGCCTCGAA  65 76
IUJ39_RS07435 NONE
IUJ39_RS07440 1488086 .. 1488104 +  -4.5   -3.9712   CCATTAAGCAGTACA             CTCACCG TACGT CGGTAAG             TTTGTAGTAGACTGA  59 34
IUJ39_RS07445 1488507 .. 1488521 +  -2.8  -5.45652   GTTTAGGCGTACGGC               CCTG TCCGGTC CAGG               TTTTTTCTTCGCCAT  85 197
        alaE 1489985 .. 1490009 + -15.7  -4.25848   AAGCGTGAGCCAGCG          TCGCGACTGGC ATT GCCAGTCGCGC          TTTTAATCAGGCGTT 100 33
IUJ39_RS07465 1491075 .. 1491094 +  -2.7  -4.67635   CAGTACTCAACAATC            TGACGCG TATTAT CGCGCCG             TTTTCTCATTTTAAA  65 250
        nrdH 1491357 .. 1491380 +  -5.9  -2.82623   TCCAGCGCCTCACGC          GGCAAGCGC ATGAAC GCGCTCGTC           TACTTCTCCAGCAGC  50 13
        nrdI NONE
        nrdE NONE
        nrdF 1494867 .. 1494906 +   -16  -4.08216   TGGAATTTTTAACCT  TAGTGGCAGGGGAAAT AACATTAC ATTTCCCCTGCCATTA   TTTTAACCAGCATCA 100 29
        proV NONE
        proW NONE
        proX 1498661 .. 1498679 +  -3.2  -3.51924   CAACATCCGCTATGA             TTGTTTTC CCA GGAAATAA             TTATCTGAATCACGA  50 143
IUJ39_RS07505 1500125 .. 1500141 +  -2.9  -4.21194   TGTTGCATTGGGTTT              TAAGGCT GTG AGCCTGG              TTTTCGCTCCTCCCG  58 263
        mprA 1500962 .. 1500985 +  -9.6  -3.85817   ACAGGAAAGCGGACT          GGCCAGCA TGCGTTAC TGCTGGCC           TTTCTGACAACAGGT  79 73
        emrA NONE
        emrB 1503775 .. 1503794 + -12.2  -5.08824   GCGCACTAATAAAAA            GCCAGTTC ATGT GAACTGGC             TTTTTTGCATCAGGG 100 32
        srlA NONE
IUJ39_RS07605 NONE
        srlB NONE
        srlD 1518130 .. 1518141 +  -5.8  -3.30124   AAATTGCCGGATGGC                GACG TAAC CGTC                 TTATCCAGCCTACGG  56 45
        gutM NONE
        srlR NONE
        gutQ 1520363 .. 1520400 +  -7.1  -3.53012   TTAATCCTTCAGTCC  CAGACGTTTCGCCAACC GATGCA GGTTGGCG-A-CGTCGG   TTTCCAGCGCCCGCG  65 37
        norV NONE
        norW 1524871 .. 1524892 +  -6.6  -3.28712   CGGTTGTGTATCACC           CCACCGCTG AAGAC CAGCG-TGG           TTATCCCCCGCGCCG  59 273
        hypA 1536360 .. 1536370 +  -2.4  -3.53811   AGGCAACGCCGCCGT                 CCGG CGA CAGG                 TTTACAGCAAGTAAC  47 89
        hypB NONE
        hypC NONE
        hypD NONE
        hypE 1539782 .. 1539792 +  -8.2  -3.73042   ATAGACCTTTTCGCA                 CCGC GCC GCGG                 TATTTTCCTGGAAAA  71 141
        flhA 1542167 .. 1542182 +    -4  -4.59773   TGTCCTCGCCAAATA              CGCACTT ATC AAG-GCG              TTTTTGCGCGTAGGA  70 301
        sitA NONE
        sitB NONE
        sitC NONE
        sitD 1546346 .. 1546356 +  -5.4  -3.65522   AGTCCATCCCCAAAC                 GATG CAT CATC                 TTCTTGCGATAAATA  58 447
        hilD 1554284 .. 1554316 +  -9.1  -4.81163   GATGAAAGTATCTCC      TTCCGGCTTTAACCC TGT GGACTAAAGCCGGCA      TTTTATTCATGTTTG  90 295
        hilA NONE
        iagB 1557288 .. 1557322 + -10.2  -4.67011   ATAATCTTATAGCAA     TAGCTTACTTTCAGAT GAT ATCCAAAAGTAAGCTA     TTTTTAAATCAACTT  91 37
        invH 1579742 .. 1579762 + -11.1  -5.64421   AAACTGCTTTTTGAT            ACAGCAGCG CCT CGCTGCTGC            TTTTTTATTTGCAAT 100 175
IUJ39_RS07960 NONE
        mutS 1597307 .. 1597318 +  -5.8  -4.79752   TCTTTCCTTTTTTAG                GTGC AAAA GCAC                 TTTTCTATTGTTCAG  76 479
IUJ39_RS08025 1599683 .. 1599694 +  -2.2  -5.72616   CTCCATATTGATTTA                CGTG ATAT TACG                 TTTTTTTATGTGAAT  86 194
IUJ39_RS08045 NONE
IUJ39_RS08050 NONE
IUJ39_RS08055 1603486 .. 1603505 +  -9.2  -5.40072   AACGGTAAAGAAAAA            GGCCAGCC TGAC GACTGGCC             TTTTTTTGACGAAAG 100 33
IUJ39_RS08120 1615025 .. 1615037 +  -7.7  -3.12351   TGCTGACGAAACTGA                TCCAG TTC CTGGA                TTGCATCTGGAGGGC  62 432
        sopD 1617258 .. 1617278 +  -5.3  -3.76373   TGCTCGCGGCGCAGG            CCCGCAAAC CAC GTCTGCGCG            TTTAAGTCTTGCAGC  61 394
        queD 1622562 .. 1622574 +  -9.1  -2.73012   AAGTTTCAATACACA                GACGC GTC GCGTC                CTCTTTCTGGCTAAT  63 400
        barA 1635149 .. 1635161 +  -6.2  -3.63627   AGCAGGCGCTAATGT                GCCG GATGG CGGC                TTTGCCGTATCCGGC  62 51
        queF 1644600 .. 1644620 +  -2.5  -3.43042   ACGGGCAGGCTGGCG            CGTCAGTAA TCT TTTTTGGCG            ATTTTTCGTGCCGGA  48 17
        ppnN 1646093 .. 1646119 +  -9.4  -2.76762   TGCGCTTAACGCTTA         TGCCCGGTTG CCGCCAA CAGCCGGGCG         CTTCTCTCATTCCTT  69 32
        sdaC 1647948 .. 1647966 +   -16  -3.50393   CAGTTAAGTCCTTTA             GCGCCGCA TAC TGCGGCGC             TTCTCTACGATACAA 100 34
IUJ39_RS08250 1649380 .. 1649431 +  -4.4  -4.17316   AGTCCCACCAGGTTT CAGGATATGTAGGCCGGATAAGGCG CTT CGC-TTATCAGGCCTACGGATAGCG TTATTTTGCAAAACT  64 40
         xni 1650660 .. 1650678 +    -8  -3.28712   AAGCAAAATAGCATT             CGCGACGC CGT GCGGCGTG             TTGTAAAACGCGCCC  62 425
        fucP NONE
        fucI 1655919 .. 1655933 +  -4.2  -3.94381   GCCCGATAAGCGCAG               CGCC ATCCGGC GGCG               TTTATGGAGTTATCT  57 99
        fucK NONE
        fucU 1657805 .. 1657823 + -13.1  -3.17212   AACCTCTTGCCGGTG             CGCCCGC ATGAC GCGGGCG             TTCATCGAATGATGG  91 39
        fucR 1658562 .. 1658608 +    -7  -3.09516   AACCGACCTGATAAA CACGGCGCCATCAGGCCGTTAG ACA CACATGGCCGGATAGCGGCGCG TTGCCTCATCCGGCC  58 4
        csdA NONE
        csdE 1663514 .. 1663532 +  -3.1  -2.65046   GACGCTGTCAGGCGA             TGCTGAG AATAA TTCAGCG             ACTTTATTATTTTTG  42 65
        rarD 1664667 .. 1664678 +  -3.6  -2.57344   CAGGGCCGGATAAAA                CGCG TCGG CGTG                 ATTCTCCGCCCCGTC  42 50
IUJ39_RS08340 NONE
IUJ39_RS08345 1667111 .. 1667124 +  -8.1  -6.02919   AACCAATTTAATGAA               CACCC TAAT GGGTG                TTTTTTTGTTTCTGC 100 36
        argA 1670290 .. 1670303 +  -5.9  -3.06796   GTTCCCGCGTTACGA               CCGGC GAAC GCTGG                TTGGGTAAAATCAGC  53 287
        mutH 1689945 .. 1689958 +  -2.3  -4.11484   CGCCCGATGCCCGAT               AAGCG TCTC CGCTA                TTTTACACCGTTCGC  55 41
IUJ39_RS08425 1690776 .. 1690804 +  -9.6  -2.82263   ACCCGCTGTAACTCT       GT-CTCGCTCCCC AGCC GGGGAGCGAATAC        TCACTTTATTTCCTT  69 30
IUJ39_RS08430 1691312 .. 1691327 +  -5.4  -3.21099   TTTTTATTGTCCTTT              GTCAGG AATT TCTGAC               TTCATAATAAAAAGG  54 178
IUJ39_RS08435 1692393 .. 1692416 +  -4.4  -3.15544   ATCCGGCGCCATGAT          GCTCAGTGCC CGGT GGCGCTACGC           TTCCTGAGCCTACAG  50 27
        galR 1697774 .. 1697808 +  -9.2  -3.32963   CTAATAGCTCCTCAA    TGGTCTGGCGACGGC GAATTA GCCG-CGCCTGTCCA     TTGTCAAATAACACT  69 347
IUJ39_RS08470 1700073 .. 1700087 +  -7.1  -2.62184   ATGTCACGGCATCTG               CGGCA TGAAT TGCCG               TAGTATCAAAAACCG  57 41
IUJ39_RS08510 1708075 .. 1708098 + -12.5  -3.83502   GGCTAAAGTAACAGA          TAGCCGGGA TAGTAC TCCCGGCTA           TTTAATATAAGAATC 100 35
IUJ39_RS08520 1709380 .. 1709392 +  -6.2  -3.53563   ATTTGCGCGTCGCTC                CGGC TGATT GCCG                TTTACCACCGACTCT  60 83
IUJ39_RS08525 1711030 .. 1711044 +  -2.8  -2.52775   TTATTATTTCATAGC               GCTGAA TGA TTCAGG               ATGATTTTATGTAAA  40 428
IUJ39_RS08530 1713835 .. 1713862 +  -5.5  -2.57132   GGTAGGCATGTCATG        GTCGTTCTGAG ATGATG CTCGGGGCGGC         ATTCTACCCGCCCCA  50 16
IUJ39_RS08545 1717229 .. 1717241 +  -3.4  -3.09635   ATCAAAAGCAGGGGT                CGAT AGCAG ATCG                TTGGCTGGTAAAACT  45 121
IUJ39_RS08555 1719338 .. 1719355 +  -2.8  -4.68424   CATGAACCATGCGCA             TAAATG TAATTT CATTTA              TTTTTCAATCACTTA  65 279
IUJ39_RS08560 NONE
IUJ39_RS08565 1720356 .. 1720367 +    -3  -2.97588   AACCCCTTTACTGGT                TGTT ACGA AACA                 TAATTTCGCTTAAGT  42 39
IUJ39_RS08570 NONE
IUJ39_RS08575 1722387 .. 1722404 + -11.3  -3.62275   GAGATGACCATCAAA             GGCTGGA GAGA TCCAGCC              TTTCCCCTCCTCCCT  87 293
         idi 1724638 .. 1724650 +  -7.7  -3.34344   AATTATTGAGCGAGT                TTGCC AAC GGCAA                TTGATTGCCGGATGG  65 9
        fldB 1731485 .. 1731517 +  -5.7  -3.02829   CCACTACGCTTGCCT     CTCGACGGAACCGGT TTTGC GCCG-TTCCGTC-AG     TGTTAGCGCGATATC  52 49
        ygfZ 1733435 .. 1733486 + -21.3  -3.28712   GGATCCCCTGATGGC GCAGCATTTATCCGGCCTGCAAGAA TCTG TTCTTGTAGGCCGGATAAA-GC-GC TTGTACCGGCACCAG 100 56
IUJ39_RS08650 NONE
        zapA 1746376 .. 1746397 +  -5.9  -3.28791   TTTGAATAACACTTT           TCGCTTTAC TATG GTAGAGTGA            TTGTGAAAACAGAAT  56 32
        ssrS 1746576 .. 1746596 +  -3.9  -3.35679   GGGTTACAGCCTGCG            GCGGCATCT CGG AGATTCCCC            TTCTGACTGGCGACA  50 7
IUJ39_RS08700 1747316 .. 1747330 +  -7.1  -2.64973   TCAGTACAGCAGACG               GGCAC GAATG GTGCC               TGGTATCGCCTTCAT  57 130
        argP 1750532 .. 1750543 +  -7.2  -3.30243   TTAATGCCGGATGGC                GGCG TGAA CGCC                 TTATCCGGCCTGCAT  63 50
        scpA NONE
        meaB NONE
        scpB 1754773 .. 1754801 +  -6.6  -2.66316   GCCGGTTCGCCCAAA       GCGCTGCCTGCCG CGAT CGCCAGAC-GCGC        TAATGTGCTGCACCA  55 147
IUJ39_RS08775 NONE
IUJ39_RS08780 NONE
IUJ39_RS08785 NONE
IUJ39_RS08790 1766115 .. 1766125 +  -2.6  -3.09968   TGCGCGACGGAGCGC                 TAAT CCC ATTA                 TGTTGACGTTAAATC  43 9
IUJ39_RS08795 1766831 .. 1766846 +  -3.2  -2.78032   CGTCATCTCCAGCAT              CAGATC GGCA GATCGG               CTATTTTCCAGCACC  41 42
IUJ39_RS08835 1775499 .. 1775510 +  -7.2  -3.30124   ACAGTGCCGGATGGC                GGCG TGAA CGCC                 TTATCCGACCTACAG  63 48
        metK 1780732 .. 1780758 +   -16  -2.70932   GCCATGCCGTACTCA         TAAAGGCCAGCG CCA TGCTGGCCTTTA         TCATTGCCGACAGCC 100 76
        galP 1782558 .. 1782584 + -22.4  -5.08601   GACTAAACCCTCCCA         CGCTTCCTCCCG CCA CGGGAGGAAGCG         TTTTTCTTGCAGTCC 100 35
IUJ39_RS08865 1783125 .. 1783145 +  -2.5  -3.72695   GCTGGTCGCCGGGTA            GTCTCCGAA ACG TTTGGGAAC            TTTCCTGAGCGAACT  52 25
        endA 1783976 .. 1783992 +  -3.5  -3.92377   CTGGATATCCAAACG              CCGGGGC CAT GACGCGG              ATTTTTTATTATGCG  55 74
        rsmE NONE
        gshB 1785811 .. 1785833 + -10.6  -3.51924   TTATCCGATAAGGCA           GCCGTCCTTT GGC AAAAGACGGC           TTATATGAGTGACAA  81 135
IUJ39_RS08885 NONE
        ruvX 1787163 .. 1787175 +  -5.5  -2.84732   TGCTCCGGAGTAAAA                CGCTG CAT TAGCG                TCTCATCACTTTCCG  49 295
IUJ39_RS08905 NONE
IUJ39_RS08910 NONE
        yggU NONE
IUJ39_RS08920 NONE
        hemW 1792183 .. 1792197 +  -2.8  -4.10672   ATTAAATATCGTCTG               GATCTG TTT TGGATC               TTTGGTTTGCGTTAA  56 146
        mutY 1796399 .. 1796410 +  -7.2  -3.53224   TACAGCAGTTACGTA                CCGG AGCG CCGG                 TTTAACGCCCCGGTC  65 9
IUJ39_RS08955 NONE
        mltC 1797999 .. 1798011 +  -4.9   -3.6292   CACCCTTTTGATTTG                CAATT AGA AATTG                TTTGCAAATATTTGT  57 108
IUJ39_RS08965 1799770 .. 1799783 +  -2.3  -4.12902   GCGGCAGGCTTTCTT               TGCGA AACA TCGCC                TTTTGCAGATCCTTG  56 406
IUJ39_RS08975 1802705 .. 1802717 +  -3.4  -4.71382   ATACCGATTTCCGCC                GCAT GGGGA ATGC                TTTTTGCCTGATTCT  66 2
IUJ39_RS08980 1802978 .. 1803017 +  -6.4   -2.6176   GTTAGCGTAAAAATC  TTTCCAGATGCGTTTTGA TTTA TCCCTACGCATCCGGAAA   ATTGTGGGTCAGATT  53 94
IUJ39_RS08990 NONE
        tnpB NONE
IUJ39_RS09000 1807129 .. 1807142 +  -3.9  -5.09895   AAACCGTACAAAAAA               TTTCT ACGT AGAAA                TTTTTTCGGTGGATA  76 280
        ripR 1822110 .. 1822142 +  -6.4  -4.26188   CGCATAACCTGCCCG     TGGGAATAGCGT-GA CAAG TCGACGCAATTTCCA      TTTTCCATCTATCCA  70 337
IUJ39_RS09085 1826211 .. 1826250 +  -6.4  -4.08064   AGCAGAAGAATACGC  TGGTGCCGCTCAAGCCG CAGATAA CGGCGT-AGCGGCGGCA  TTTTGCAGACCACTT  68 218
IUJ39_RS09110 1831795 .. 1831834 + -12.3   -2.6186   CGCTGAAAAATGATC  CAGGCAGATCGGCCATAC CGAAA GT-TGGGCGATTTGCCTG  ATTATCGGGTTCGCT  81 111
        uxuA 1838622 .. 1838646 + -16.5  -3.60098   GCAAATAACCTTCTC          TCGCATGGCGC GAC GCGTCATGCGA          TTTCCCCTACGCAAT 100 33
IUJ39_RS09145 NONE
        uxaC 1841656 .. 1841682 +  -4.3  -5.55769   AGCATAACAAACAGA         GTCGCCGTG AATATCCAG CCCGGCGGC         TTTTTTATTCTCACG  90 57
IUJ39_RS09155 1841992 .. 1842003 +  -5.8  -3.27022   ATTCTGTCGAGTTCT                TGCG ACAT CGCA                 TTCATATCGCCTGCG  54 212
        yghU 1846728 .. 1846739 +  -5.8  -4.46212   GATAACAGCAGAAAA                TCGG CAAG CCGA                 TTTTCTGCTACCGAA  72 178
IUJ39_RS09240 NONE
IUJ39_RS09245 NONE
IUJ39_RS09250 1859301 .. 1859331 +  -6.1  -2.88776   GATAATCAGCAGAAC       CAACATGACATCG ATAAA CGGCGTCACGTTG       ATTTCATGCATTTCA  52 479
        metC 1861587 .. 1861615 +  -6.7  -3.89346   GCAGATAGACATATA        TGCAGACAATTTC CGT GGAAAAGTCTGCA        TTTGTAGCGTCCGGG  68 48
IUJ39_RS09270 1862528 .. 1862552 +  -3.3  -3.17212   TGCGCTCTCATAGCC          GACCCGCATCG CCG CGGCGCTGGCC          TTCATACCGTCGTGA  45 191
        yqhD 1864666 .. 1864682 +  -2.1  -3.89215   CAGTCGTCGGATTTA              CGAAGCG GCA CGCTAAG              CTTTTTTTGCCTCTG  53 10
        dkgA 1865636 .. 1865655 +   -15  -5.15969   TTTATCGCGCGTCAT            GCCCGACG ATTT CGTCGGGC             TTTTTTGCATTCCGA 100 47
IUJ39_RS09295 1867820 .. 1867830 +  -8.2  -2.73338   CTGTAAAGCAGTTTA                 GCGC CCC GCGC                 CTTTCCCGCGCTTCT  60 73
        qseB NONE
        qseC 1877511 .. 1877552 +  -5.3  -4.39386   AGGCCGTAGTACGTT GGTAGCAAAGTCTTTTACTT AAA ACGCAAAAGACTTTGC-ACA TTTTGCTAATTTCAC  68 21
IUJ39_RS09335 NONE
IUJ39_RS09340 1879002 .. 1879020 +  -3.9  -3.61398   ATATAGCGGCGGCAG            CGCGACAT AAAC ATGTC-CG             TTCTTCACCAGCGCG  53 477
        tolC 1884798 .. 1884841 +  -3.8  -3.03124   CTTGTCGGTCCTGCT TCATCGTAGGCCGGGT-AAGC GAA GCGTCACCCGGCATGAAATGA TATTCAAACGTAAGA  47 62
IUJ39_RS09375 NONE
IUJ39_RS09380 1886829 .. 1886841 + -10.5  -3.30771   AAAGTGCCGGATGGC                GGCGC AAA GCGCC                TTATCCGGCCTATCC  76 44
        zupT 1888388 .. 1888402 +  -5.6  -2.90496   CGGTTAAGACAAACG               TCGCGC CGG GTGCGG               TCCTTTAGCCAGGCA  51 34
IUJ39_RS09395 NONE
IUJ39_RS09400 NONE
        dsbI 1892219 .. 1892238 +  -9.3  -5.55664   CGTAATAACAAAAAA            CCGAAGC GTTTTA GCTTCGG             TTTTTTTCATCATGA 100 36
        ubiK 1893736 .. 1893747 +    -3   -3.5616   TAAAGGGAGCCGGGG                TTAG TGCT CTAA                 TTCTAACTTTTTCGC  48 99
IUJ39_RS09440 NONE
IUJ39_RS09445 1902927 .. 1902939 +  -7.7  -2.78384   CCAATCATAAACGCC                TGACG GTA CGTCA                TATCATCCAGCCCCG  57 439
        plsY 1904728 .. 1904760 + -24.9  -4.07568   TAGTTTTGCTGTAAC      CCCGTTGGGGCGACG TCA CGCCGCCCCAACGGG      TTTTACACCGCCGGC 100 180
        rpsU 1906269 .. 1906295 + -10.9  -4.40882   AGTTGTAGTTGTAAG        GCCGTGC-TTCC GAAA GGAATGCGCGGC         TTGTTTTCGTTTATG  90 75
        dnaG NONE
        rpoD 1910199 .. 1910216 + -14.1  -5.26316   TCGTACACGCATAAA             CGCCGCC TTAC GGCGGCG              TTTTTTATCAGGTCA 100 45
IUJ39_RS09490 1911038 .. 1911055 + -11.3  -5.60689   GAATCATATAATTAA             GCCACTC GAAA GAGTGGC              TTTTTTGTTATCTCA 100 54
IUJ39_RS09500 1913164 .. 1913182 +  -5.3  -4.67982   CGCGGCGGCAACAGA            CTCCT-CC ACAA GGCAGGAG             TTTTGTTGCGTGGCG  75 121
        ygjG 1918369 .. 1918394 + -11.9  -2.78032   AGGTTTAAAAACGAT         GCCGGATG-GCG CTA CGCTTATCCGGC         CTGTTTTCCCCGGGC  79 33
IUJ39_RS09520 1920584 .. 1920601 +  -6.9  -3.29144   GCTACGCTTATCAAG             CCTACGC CATC GCGCAGG              TTGTAGGCCGGATAA  61 59
IUJ39_RS09530 NONE
IUJ39_RS09535 1923639 .. 1923672 + -18.5  -3.35798   CCGGTCACCGGGCAG     CTATAAAGGAATACG TCAG CGTATTCCTTTATAG      TTGTAAGTGAGACCT 100 164
IUJ39_RS09540 1924772 .. 1924796 +  -8.5  -5.64421   CTCTCTGTCATTAAC          GCCCGGCGG CGCATAC CCGTTGGGC          TTTTTTGTTTAACAT 100 59
        sstT 1926299 .. 1926332 + -16.1  -5.26316   AACATGGTTAATCCT     GGCCGGATAAGACGC TAAA GCATCTTATCCGGTC      TTTTTTATCGCGTAA 100 88
IUJ39_RS09560 NONE
        mzrA 1928193 .. 1928204 +  -4.4  -4.16371   TCCGAATCATATCAC                TCAC TTTG GTGA                 TTTCGTTGTTTAATG  64 51
IUJ39_RS09570 NONE
IUJ39_RS09575 1929014 .. 1929026 +  -4.1  -2.57683   TGTTGGGCGTACTTC                TGACG CGT CGTTA                ATTATGGCGGACTCT  44 12
IUJ39_RS09580 NONE
IUJ39_RS09585 1929741 .. 1929788 +  -7.1  -4.19472   GTCTTTTCTTTTATA GCATCGCGCTATCCGGCTAACA TCCGT TGATATCTG-ATAGCGCGATAC TTTTCAGGTATATTA  74 42
IUJ39_RS09590 1930432 .. 1930446 +  -7.2  -3.14132   AACAGACACCTCAGA               GTCATT TAA AATGAC               TTGATGAGAGGCGCC  62 92
IUJ39_RS09595 NONE
IUJ39_RS09600 1931162 .. 1931172 +  -3.2  -3.23393   GCTGTATCTGGCCGT                 GGTT GTT GACC                 TGTTCTCACGTAAAA  46 75
IUJ39_RS09610 NONE
IUJ39_RS09615 1934121 .. 1934131 +  -2.6  -3.45991   TTAAGGAGAGTTAGG                 TTTT ATG AAAA                 TTAAATTTATTTTGT  48 11
IUJ39_RS09620 1934582 .. 1934631 + -10.8  -3.33003   TCTCCGGCCAGTTTT TGCCTTGCATAGGTAACC-GGCGG TATG CCGCCAGGTGAGCTATGCG-GGCG TTCCTCGTTATATTC  80 126
IUJ39_RS09630 1936202 .. 1936238 + -13.8  -4.41348   AAACGTTTTTCCTGA   TGGCGGCGCGGCGCT GCTTTTAA AGCGCCGCGC-GCTA    TTTATTTCCCGGCGA 100 26
IUJ39_RS09640 NONE
IUJ39_RS09645 1938171 .. 1938201 + -22.7  -3.73936   CGCCATCTGGCGACA       CGAATGCCCCGGC CTCCT GCCGGGGCATTCG       TTATTAATGCGCTTT 100 66
        garD 1955933 .. 1955955 +  -4.8  -4.70266   ACCGTATAATTTGTA           GACCGGGT AAGCGCC ACCCGGTA           TTTTTACGTGCTATT  73 88
        kbaZ NONE
        nagA 1959567 .. 1959592 +  -3.3  -5.04868   ATTGTACGTTATCCT         GGCCTT-CGG TTACCTC TCGCAAGGCC         TTTTCTTTCCTTTCC  74 49
IUJ39_RS09730 NONE
        kbaY 1961939 .. 1961976 + -11.5  -2.69073   TACTTAGTTCTCAAT   TTATGAAGGTCATGATG AACA CCTCATGATCTTCATAG    TACCTTATTGTAAAT  77 76
IUJ39_RS09745 NONE
IUJ39_RS09750 NONE
        diaA 1966190 .. 1966201 +  -4.4  -2.71731   CGATAACACGCTTTT                TCCT CACC AGGA                 TGATTAAGGAGTACA  47 7
        yraP 1966777 .. 1966793 +  -2.3   -2.9914   GCGTTACCACCGCCT              TTACGTA TAT TAAGTAA              TCTGTGTGCCGGGTG  42 9
        yhbO 1968145 .. 1968157 +  -2.6  -3.83963   CTGGGCGCTTGAGTC                GCGT AACCA GCGC                ATTTTTTTACCAAAT  52 29
IUJ39_RS09780 1969271 .. 1969299 +    -3  -3.02144   GGCCTTCATCATCCG        TGGCTACCAGAC CGAGC GTCAGAAAGCCA        TCTTCACGCAAATCG  43 377
IUJ39_RS09795 NONE
IUJ39_RS09800 1972041 .. 1972052 +  -7.2   -3.3164   AAATTGCCGGATGGC                GGCG TGGA CGCC                 TTATAAAGCTCACTT  63 40
IUJ39_RS09805 1973617 .. 1973637 +  -3.9  -3.01712   TGGAGAACACCACCA            GCAGCAG ATCCAGA CTGCGGC            TGTTCAGCACGCCGC  46 501
        argG 1988677 .. 1988692 + -11.8  -5.24531   GAATGATATTTCACA              GGCCGC GCAA GCGGCC               TTTTTTATAGGGGAT 100 43
        yhbY 1994974 .. 1994988 + -12.8  -5.13137   TCTCCGTTGATAAAA               GGCCGC TAT GCGGCC               TTTTTCCTTTCTTTA 100 118
        dacB 1997257 .. 1997276 + -16.4  -3.21726   CGGAACCTAACAAAA            CGGGCCGC AAAT GCGGCCCG             TTGCATATTGTAGGC 100 89
        ispB 2001439 .. 2001464 + -13.3  -2.53876   GTTAATGCCGTTCTC         TTATCCCGCGC TTTC GCGCGGGATAC          TCCATTAAGCTCCAA  84 36
        sfsB 2001956 .. 2001979 +  -9.6  -3.63515   GTGCCCGCAAAGCAA          CCCCCGC-AAT AGC GTTCGCGGGGG          TTATTCAGCGTACAG  77 46
IUJ39_RS09985 NONE
        kdsD 2009041 .. 2009056 +  -4.6  -2.62616   TTACATATGCATGAT              CTCCTG CGTG CAGGCG               TCGTGTAGAAACTCA  46 2
        kdsC NONE
        lptC NONE
        lptA NONE
        lptB NONE
        rpoN NONE
         hpf 2013297 .. 2013323 +   -13  -3.92522   TTAGCCAGTGCAGGA         CGGCCTGTTGTG CGA CACAACGGGCCA         TTTGTACAGTTAGCG 100 53
        ptsN NONE
        rapZ NONE
         npr 2015257 .. 2015270 +  -2.5  -3.84712   TTTGTCCATACTAAA               TTTAT GTGC ATAAA                TTTAGTATGGACTTG  52 235
        yrbL 2016418 .. 2016429 +  -3.6  -4.65895   CTCATTCCGCTCATT                GTGC GCCA GCGC                 TTTTTCAATCGCCAG  70 523
        gltB NONE
        gltD 2027673 .. 2027687 +  -5.7  -3.16191   ATGGATTGATCCGTT               TACGC CTGAA GCGTA               TTGATAGCGCTCTAA  54 171
IUJ39_RS10075 2028951 .. 2028969 +  -2.5  -3.28712   AATTTCAAGGAGGCG            TTG-TGTC GCAA GACAACAA             TTATAGCCAGGGGCC  46 171
        codB NONE
IUJ39_RS10085 2031956 .. 2031967 +  -7.2  -3.96327   GCCCTGCAGTTCATA                GCGC CCCG GCGC                 TTTCTCCTGCGGCCT  68 508
IUJ39_RS10145 2041539 .. 2041559 +  -8.2  -3.16328   CGTTAAGAAATTTTT            CGGGCGCA TCGCT TGCGCCCC            TCTCTATCTTTCCTG  64 49
        degQ 2043051 .. 2043080 +  -7.9  -3.11192   TAACCCTGTCTTAAA       CCGGGCATCAGCCT GCG ATG-TGATGTCCGG       TTAACTCATGGTATG  62 38
        degS 2044236 .. 2044251 + -10.4  -5.93809   GAAGGGATAAAAAAA              CCGGAG TCAG CTCCGG               TTTTTTTTATAGCAA 100 63
        argR 2046106 .. 2046132 +   -13  -2.57982   AACTCTAGCTCCCAT         TTCCTCCGTCGT TGT ACGGCGGAGGCA         CCTTTTATCCTCTCT  84 33
        yhcN NONE
      yhcN-B 2047124 .. 2047142 +  -9.5  -5.28826   CTAACCCGACGACTT             GCCCCCG CCTGT TGGGGGC             TTTTTTATGGCATTT 100 52
        aaeR 2052148 .. 2052166 +  -2.2   -4.1899   TGTCGCGCCCTTCAC             CGGCGTCG TGA CTTTGCCG             TTTTCAATCAGATAC  58 345
IUJ39_RS10245 2065676 .. 2065689 +  -3.8  -3.43492   CTGTCATATTCACAA               CACG CCACTC CGTG                TTGTGGTGGGTATAC  52 101
        msrP NONE
        msrQ 2067358 .. 2067377 +  -7.9  -4.30416   TTGCAAAACGCAAAA            CAGGCAA TGTCCT TTGCCTG             TTTTGGATTGATAAT  79 62
        accB 2068168 .. 2068195 +  -2.7  -3.09803   AATTTGACGAGCCAC        TGGTCGTCATCG AGTAA CGA-GGCGAACA        TGTTGGATAAAATTG  43 9
        accC 2069591 .. 2069618 + -15.6   -4.7373   AGTTATGTGAACTAA        CGCCGGACTTTC TGAC GAAAGGCCGGCG         TTTTTAATGGCCTGA 100 72
IUJ39_RS10270 2071840 .. 2071873 + -10.4  -2.56177   AATAATTGATCTGCC     CTTCCGCTGTATCA CGTCGC TGATGCAGCGGAAA      ATTACTGTCCAATGT  70 32
IUJ39_RS10275 NONE
        panF NONE
        prmA 2074531 .. 2074550 +   -15  -4.37092   AAATAGTTCTTGTCT            GCGTGGCC GCCT GGCCACGC             TTTTCTCCACACAAT 100 35
IUJ39_RS10290 2075409 .. 2075444 +  -9.1  -4.34263   GCGATCCCATTCATT    TGGGGTAATCCGCTT ATAAAA AAGCAGATTATCCCG     TTTATCTTATTCCCG  85 131
        dusB NONE
         fis 2076999 .. 2077024 +  -8.2  -5.24129   CTGCTTGTTTAAAAA         GGCGCTACTC GGCATG GGGAAGCGCC          TTTTTTATACGCACC  91 55
        yhdJ NONE
IUJ39_RS10310 2078286 .. 2078304 +  -3.8   -4.9448   TAAGGATAAAAGAAC             GGATGATA CTG TCTCGTCC             TTTTCTTTCCTGCAT  74 121
IUJ39_RS10325 NONE
IUJ39_RS10330 2084406 .. 2084421 + -10.4  -5.02074   TAATCGGTAAACAGA              GGCGTC TTCG GACGCC               TTTTTTAGACGGTAC  93 38
IUJ39_RS10335 2085305 .. 2085339 + -15.3  -4.55209   CTCACTGTGAAAAAT    GCAAAAAGGCCTAATC TTTC GATTAGGCCTTTT-GC     TTTATTTGATGTCTG 100 477
IUJ39_RS10380 2092236 .. 2092246 +  -6.8  -3.18912   ACGCTAATAATTCCT                 GCTG TAG CAGC                 TTAATCACTGGCTCG  59 272
         def NONE
         fmt 2097378 .. 2097396 + -10.2  -5.54907   GGTCACGTCTTTATA             AGCCCGGT GTT ACCGGGCA             TTTTTATTTTATACA 100 42
        rsmB NONE
        trkA 2100107 .. 2100125 + -11.7  -4.90917   TTCCTCTAATTTAAG             GGGCGCT CATTC AGCGCCC             TTTTTAATTCCCTTT 100 32
        mscL 2100662 .. 2100713 + -10.3  -3.09933   ACCGTTCTTAATAAG CAG-AAGGCCAGTGGTAAAAAAGT CGCTT ACTTTCTTGCCACTGGCCTCCCAG TTCCCTCGATTACCG  73 30
        hopD 2116693 .. 2116707 +  -2.8  -4.59773   TCAACATCATTAAGC               CTGG TCAGCCC CCAG               TTTTTAAACATACGG  68 383
IUJ39_RS10655 2125064 .. 2125078 +  -9.2  -5.24531   TTGAGACGTAAAAAA               GCGGGT TTT GCCCGC               TTTTTTGTGCCGGAT 100 37
IUJ39_RS10680 NONE
IUJ39_RS10685 2131394 .. 2131406 +  -9.1  -3.30124   GTAATTGCCGGATGT                GACGC TTC GCGTC                TTATAGGGCCTACAG  71 37
IUJ39_RS10735 NONE
IUJ39_RS10740 NONE
IUJ39_RS10745 2141752 .. 2141762 +  -2.4  -3.02144   TAATGTGCGTAAACA                 GGCG CGG CGCG                 TCTTCCCGGCGCTCG  42 284
         crp 2142944 .. 2142965 +    -8  -5.42975   TTAATCCCGTCAGAA           TGGCGCGT TTTATC ATGCGCCA            TTTTTGTTTGTATCG  95 37
IUJ39_RS10760 2145174 .. 2145185 +  -4.4  -2.64199   CTCCCCACCGCCTGC                GCAA AGCG TTGC                 ATTCCTTCATCGATC  45 131
        tsgA 2149946 .. 2149981 + -12.6   -4.1821   CTGCGCATTGATAAT    GAGTGCCGGATGGCGGC TTC GCC-TTATCCGGCACGC    TATTTTTTCCCTCCT 100 30
        nirB NONE
        nirD 2153085 .. 2153105 + -12.5  -5.44837   GCGGTTAATTAATTT            TGGGAGGCG CAA CGCCTCCCC            TTTTTGTATTTTTTT 100 33
        nirC NONE
        cysG 2155561 .. 2155575 + -11.4  -4.84359   CGTACATAGAAAAAA               CCGGGA ATT TCCCGG               TTTTTCTAAAGGTCA 100 121
        mrcA 2168580 .. 2168607 + -11.4  -4.87133   ACGAACTGTTCTGAT        CAAAAAAGGCGC TCCG GCGCCTTTTTTA         TTTTGTTTGCCGGAT 100 27
        igaA 2171700 .. 2171734 +  -9.2  -3.18274   TCATCTGATAACGCC     GCCGTGCGACAGGGTA TGC TACCCTGTCGCGCAAA     TTGCGTTACCCTGGA  70 33
        yrfG NONE
        hslR NONE
        hslO 2173931 .. 2173943 +  -7.7  -3.01791   TGCCCGGCAATCGCG                CGCAA AAG TTGCG                TCTTAGAAAACCCGT  59 216
        pckA 2177623 .. 2177640 + -12.7  -4.35091   CGACGTTGAGAAAAA             GGGAGGC TAAT GCCTCCC              TTTCTTATGCCTCTT 100 106
        greB 2180434 .. 2180448 +  -3.4   -2.6933   GAAGAATCCTAAGCC               CCCGCT GAT GGCTGG               CATTTTTGTCAGCCA  43 46
IUJ39_RS10930 2182936 .. 2182969 + -16.9  -4.14739   GGCGACGCTCTCAGC     CCATAGGCCGGATGA AACC TTATCTGGCCTATGG      TTTTACAATACCTCC 100 119
        feoA 2183577 .. 2183589 +  -4.1  -3.14602   GGCGTTAATAGAAGT                GGAAG CGG TTTCC                TGTTAATACAGTGAG  48 7
        feoB NONE
        feoC 2186188 .. 2186218 + -11.3  -3.34715   TTGCGTTAACCTTCG      CCGGATAGAGACGT TAAT GCGTCT-TATCCGG       TCTTTACCCCGCGTG  83 32
        gntX NONE
        nfuA NONE
        gntT 2190820 .. 2190837 + -14.1  -5.39221   TGGCGCCATAAAAAA             GCCGGGG AAAT CCCCGGC              TTTTTTACTTCTTCT 100 134
        malT 2199066 .. 2199090 +  -5.1  -3.18912   CACCAGCATTACGTG         GCGCG-AATT TTCAAT AATTGCGCGC          TTGGTACGTACCTCA  52 278
        glpD 2202870 .. 2202884 +  -6.4  -4.30844   AGTAACCCATATTGG               CGATGT TAA GCATCG               TTTTCGTCGTCCACT  72 199
IUJ39_RS11070 2221202 .. 2221235 + -10.2  -2.72991   GCAGATACAATCCAC     GCCCCAGCGCAGCAG ATCTG CCGCC-CGCTGGGGC     TGATTGACGGTATAA  67 79
        panM 2232472 .. 2232484 +  -4.8  -4.09685   GCCACCCCTTCCGGC                CCCA TAAAC TGGG                TTTTCAGCCCTGCGG  62 433
        rsmD NONE
IUJ39_RS11160 2239047 .. 2239063 +  -6.5  -4.94902   TTTTGCCGTAACGGC              GCCGC ATCATTA GCGGC              TTTTTCTCGTCGTTG  83 312
IUJ39_RS11170 2239936 .. 2239955 + -12.2  -2.95223   AATAATAGTGCTTGA            CTCTGGAG TCCA CTCCAGAG             TGTATCCTCCGGTTA  80 40
        zntA 2242211 .. 2242234 + -16.7  -3.61715   AATAATCTTCTCCCG          CCCGGCGGC ATCGTA GCCGCCGGG           TTCTTCCCCGCAGTA 100 36
IUJ39_RS11180 2244167 .. 2244184 +  -9.1  -2.73735   GAATGTCGCGCGTCG             TCGCCGG ATCG TCGGCGA              TAATTAACAATGTTT  63 153
IUJ39_RS11190 2245147 .. 2245159 +  -5.5  -3.41602   CAGCCAAGTTAAAGG                TTCGG TTT CCGAG                TTGTGATAAGATGAG  56 29
IUJ39_RS11195 2245805 .. 2245817 +  -3.3  -5.40072   CGCCCTCCGGCAGTG                CAGAC GGA GTCCG                TTTTTTTAAGCGCCA  81 57
IUJ39_RS11205 NONE
        acpT NONE
        nikR 2249266 .. 2249283 +  -9.1  -3.17392   AAGATTAACGCCCCT             GCGCCTT GCCG GAGGCGC              TTCGCTTGCCCGGTC  70 33
        pitA 2252840 .. 2252861 + -11.5   -5.4833   GCTTGTCTAACACGA           GCGGGCCAG GAAA CTGGCCAGC            TTTTTTGTTCAGTGC 100 115
        uspA 2254126 .. 2254143 + -10.5   -5.8187   GGCAAGCAACAATAA             CGCCCGC TTAT GTGGGCG              TTTTTTTATTCCCTC 100 120
        dtpB 2255843 .. 2255855 +  -4.7  -3.30124   TTAATGCCGGATGGC                GACGC AAA GCGCC                TTATCCGGCCTACAG  52 44
IUJ39_RS11255 2257945 .. 2257983 +  -8.2  -3.53012   GACGATAGCGTTAGG  CGTCGCGA-TATCCGCC AACGGC GGCGCATAATCGGGACG   TTTAACCACCACGCG  67 110
IUJ39_RS11275 2263207 .. 2263220 +  -3.1  -3.63805   TAATCACAGCCATCG               GTGGA AGCT TTCAC                TTTCAGGTATACAAT  51 38
        gorA 2264654 .. 2264689 + -14.8  -2.57136   GACCATGCGTTAATA    TCTTGTGCGCCCA-CCT TAA AGGATGGGCGCACAGGC    CTTCATGATTAATAC  89 28
IUJ39_RS11310 2271962 .. 2271983 +  -5.9  -4.55093   GAATCGCATCATAAA           TGGCTGA CTGAATTT TCAGCCA            TTTGTTATTGTCTGC  72 58
IUJ39_RS11320 2274345 .. 2274355 +  -8.2  -4.52589   ATTTCCCGCTGGCGG                 GCGC TTA GCGC                 TTTTATATCGCGAGA  85 209
IUJ39_RS11330 NONE
        yhjD NONE
IUJ39_RS11340 2279256 .. 2279287 + -10.1  -4.70659   CCGCGCCGCGCGCAA      TCAGCGGGCCGGGC TTCAC GCCC-GCCTGCGGA      TTTTTAAATGTCCCA  95 259
IUJ39_RS11355 2283302 .. 2283318 +    -8  -3.53012   AATGTCCGACACTTC              CGGATG CGCCT CATCCG              TTTCAACAGCGGCGG  64 107
        bcsE NONE
        bcsF NONE
        bcsG 2303039 .. 2303081 + -12.7  -4.60797   TTGGGTTCAAGTTAG CCCCCGTCAGGTTGCCAGGT TTAT ACCAGTCAACGTG-CGGGGG TTTTCTCTATCCAGC 100 279
IUJ39_RS11430 2304928 .. 2304946 + -13.2  -3.63569   TAGCGACGGAAAGAA             GACCGGAA TGG TTCCGGTC             TTCTTCGGGAATTAC 100 38
         tag NONE
IUJ39_RS11480 2315789 .. 2315828 +  -2.9  -3.34716   TGCGTAACCATAACT GGCAATGCGCGCAGAATAG ATTT CGATTTTGC-CGC-TGGCC  GTTTTTAGCGGATGA  47 504
IUJ39_RS11490 2318773 .. 2318787 +    -7  -2.77899   CCATTTTCATTAATG               CCGGAC GCG GCCCGG               TAGTTGATGAAAACG  55 371
IUJ39_RS11505 2320554 .. 2320572 +  -8.1  -3.53091   CACTTTCTGTTTTAA             CGGTCCT GCGTA GGGACCG             TTTCCCCCACACAAT  67 48
        cspA 2321058 .. 2321077 + -11.4  -5.80364   GCTCAGAATTGAAGA            TCCCTGCC TGAT GGCGGGGA             TTTTTTTATTCCAAT 100 50
        cueP 2321757 .. 2321772 +  -6.1  -5.38326   TTAAAAATAAAAAAA              CCTGC CCGAAA GCAGG               TTTTTGTTTAATTAA  91 37
IUJ39_RS11535 NONE
IUJ39_RS11555 2331686 .. 2331704 +  -7.4  -3.55801   CTTTCACCTTGCCTG             GCGCATTG GCA CAATGCCC             TTTCGCGCACTTCAT  64 353
        avtA 2334650 .. 2334661 +  -5.8  -4.37092   GACCGTCGCCGTGGT                GAGG CTAT CCTC                 TTTTATCACCCGGAT  72 380
IUJ39_RS11590 2337770 .. 2337780 +  -6.8  -2.64472   GCAAAGGCGGTTACA                 TCGC CGC GCGA                 TAAATTTCCACAATC  55 109
        mtlA 2353948 .. 2353969 + -12.3  -3.17075   ATCGGGCCTATGGTT           TCCTCTCCC GCAA GGGAGAGGG            TTAGGTTGAGGGGAA  86 69
        mtlD NONE
        mtlR 2356107 .. 2356117 +  -4.6  -4.86731   TCTTACCAGCAAAAA                 GGCG CTT CGTC                 TTTTCTTTCGAAAAA  73 363
IUJ39_RS11680 2356648 .. 2356672 +  -5.6  -3.77953   AATTCTAAACATTGA         CCGGG-CGGCG CTTT CGCTTACCCGG          TTCTTCCCTTCTTAC  61 33
        lldP 2358554 .. 2358565 +  -2.2  -2.86271   GCCTATGTTTTAACC                TGGA TGAT TCCG                 TGATTGTAATGCCAA  41 11
        lldR NONE
        lldD 2360538 .. 2360551 +  -3.7  -2.73268   GCCTGAACGCCTGGC               GCGTG AGAG CCCGC                TAAATTTCTGCTATT  45 35
        trmL 2361475 .. 2361489 +  -2.1  -4.13945   CGCCCGCGCCAATCA              TCACGC CTTC GCG-GA               TTTTAGGATGGCGAT  56 434
        gpmM NONE
        envC NONE
IUJ39_RS11740 2368575 .. 2368590 +  -4.6  -3.57144   GGAAAGACCAGATCA              GCGTCT GATA AGCCGC               TTTCGCGCTGCGGAC  55 98
        rfaD NONE
        rfaF NONE
        rfaC NONE
        rfaL 2376438 .. 2376477 + -23.9  -2.82987   CTAAGAAATAAATAA  GAAAACGCGCTGATACC TTTCAC GGTATCAGCGCGTTTTC   TATCGTCAGTATTAA 100 26
        waaA NONE
        coaD 2387905 .. 2387917 +  -9.1  -3.91084   GGCAATAGAACGTCG                CACGC TGG GCGTG                TTTGGTTGCGACTAC  78 81
       coaBC NONE
         dut 2391951 .. 2391971 + -11.2  -3.33492   AACGTCATAATACAG            CCGCAAAC GGTGA GTTTGCGG            TTATAGCGTGGGTGC  83 58
        slmA 2392687 .. 2392700 +  -2.3  -3.17075   GGGCAGGTACGCGTC               TCGCC ACCG GGCAA                TTCACTTACACCCCA  44 90
IUJ39_RS11890 2395156 .. 2395172 + -10.8  -3.76534   TCAACATGCCACAGA              GCCCGC ATTAC GCGGGC              TTTCGCGTTTATTGG  85 50
IUJ39_RS11900 2397053 .. 2397072 +  -7.8  -3.65754   ATGTAATGACGAACC            GGCGGC ACGCCCAG GCCGCC             TTTCACATAATTTAT  69 40
IUJ39_RS11905 2397925 .. 2397952 +  -9.2  -2.83522   CCGAATCCGGGAATA        TGCTGAGCAG CCAGCCAT CTGCTCAGCG         CTTTGATCCGGGGAT  66 44
         gmk 2400465 .. 2400480 +  -3.3  -2.78816   CAAATTGTTGGCAGA              CTGAA CCCACT TTCAG               TATCATGCCCAGTCA  43 22
        rpoZ 2400805 .. 2400815 +  -2.4  -2.83082   CGTCGTTAATCACAA                 AGCG GGT CGCC                 CTTGTATCTGTTTGA  40 32
        spoT NONE
        trmH NONE
        recG 2405945 .. 2405982 +  -3.2  -3.61517   CGCTATTCTAACGCC   TAGTGAGCGCGGCGGT TTTGAT GCCGCCGCACAAACCA    TTATTGCGCGAAAAT  51 23
        xanP 2408815 .. 2408840 + -16.2   -2.8789   AACCGTAAACACTAT         GCGGCGACGA CCCGAT TCGTCGCCGC          TGTAATGCTCTTTCA 100 33
IUJ39_RS11950 2410646 .. 2410675 +  -7.3  -3.37912   CCATCAATTTCCATG       TATCCCTTTGG-CT GTA AGATCAAGGGGATA       TCTTCTGTGTCAATC  63 52
IUJ39_RS11955 2416321 .. 2416343 +  -9.1  -4.63184   ACTAAACATGAAAAA           GCCCACCTT ATACC GGGGTGGGC           TTTTTGCGATCCGTT  90 36
IUJ39_RS11970 2420847 .. 2420867 +  -3.2  -3.83026   GGTACCCTTTTTTTA           G-CGATGCC TGGC GGCAGCGGC            TTTCCTCTCGCCAGA  53 396
IUJ39_RS12010 NONE
IUJ39_RS12015 2428690 .. 2428714 +  -7.1  -3.29947   TTCCGGCTGAAAAAA          CGCGTTATAGC GCA GTTGAAACGCG          TTAATCTCCTGCATA  59 340
IUJ39_RS12060 2439123 .. 2439139 +  -2.2  -3.54158   ATGATAGCCTGCAAC              GCCG CCTGCGGAT CGGC              TTCGTTATTCAAATC  47 442
        tisB 2441565 .. 2441586 + -17.3  -3.69354   TCAAGCCGCACCGAA           GGGGAGCGG GCAA CCGCTCCCC            TTTCACCTTATCCGC 100 48
IUJ39_RS12090 2442529 .. 2442548 +  -7.8  -4.92385   AGACACAACATATTC            TCGGCAAC ATTT GTTGCCGC             TTTTGTTTACATATC  87 59
        emrD 2443997 .. 2444015 +  -3.1   -5.0538   GAGTGTCCGCGTTTA             TCGCATA CGGAA TATGCGC             TTTTTTCAGCTCGCA  77 140
        dsdA 2446662 .. 2446677 + -11.8  -3.14132   TAATGGTGCCGTTTC              CGGCGC TTCA GCGCCG               TTCCTGCCGCCGCAC  77 295
IUJ39_RS12140 2452629 .. 2452654 +    -4  -3.62597   TCGCATAAGAGAGCG        CC-GC-CGCG-CC GCT GGTCGCGTGCAGG        TTGTTGGCAAATGCC  53 151
IUJ39_RS12155 2455541 .. 2455551 +    -4  -3.24188   GGTTTTTGTAACAGT                 TATC TTC GATA                 TTACTGATAATGTAC  48 131
IUJ39_RS12170 2457351 .. 2457380 + -10.7   -3.6707   CTTGATTTATCGCCC       GGTTTCCGTCACC CATA GCTGACGGAACCC        TTTCACCTCTTCCAT  83 36
        torR 2472064 .. 2472078 + -11.4  -3.18274   CCGCCTCCGCCGCTA               TCGCCG ACC CGGCGA               TTACATTGGCGTCGG  77 327
        torS 2475698 .. 2475714 +  -2.2  -5.31275   TAAAAGCACGCCAAA              GGATCC TTGCC GAATCC              TTTTTTATAATCGCA  74 130
IUJ39_RS12255 2476397 .. 2476408 +  -5.8  -3.49653   CTACAATATTACCAT                CCTC TGGA GAGG                 TTATATCGCCATGCT  58 396
        rpmH 2487226 .. 2487239 +  -2.3  -3.58343   TCGTGCTAAAGGCCG               CGCTC GTCT GACCG                TTTCCAAGTAATAAA  49 1
        rnpA NONE
        yidD NONE
        yidC 2489553 .. 2489570 + -12.7  -5.46657   GAACAGTAATGACAG             GGCGGTC AGAT GACCGCC              TTTTTTATTGCGATA 100 82
        mnmE 2491089 .. 2491131 +    -2  -4.53163   CATCGCTCCGTTCCC CGTATTCTTAGC-GCCACCC ATTTC GCGAGGCCGCTATGAA-ACG TTTTCTACTGTGTAG  61 150
IUJ39_RS12325 NONE
        yidZ NONE
IUJ39_RS12335 NONE
IUJ39_RS12340 2495004 .. 2495016 +  -4.7  -2.55544   CACGGCGGTAATAAA                GGCCG GGA CGGAC                TCCGTTAAATCCTGC  45 293
        yieH 2497387 .. 2497420 +  -3.8  -4.07885   ACCCAGCGATTCCAG     GCTC-ACCAGCAGCG GCTGG TGCTGCTGGGAGAAC     TTTTCCAGCGCGGTA  60 414
        asnA 2518391 .. 2518402 +  -4.4  -2.99458   GCCCGCACAGGTTCG                GGAA AGCA TTCC                 TGCTATTTTATAATC  49 1
         kup 2523600 .. 2523621 +  -7.2  -3.05343   TATCAACATGCCGGG           GGCCGCGT TGGCTT ACCCGGCC            TATTCAACCTGTAGG  60 46
        rbsD 2524199 .. 2524219 +  -3.2  -3.30159   CGTCATTCTTTGCGC            TGGCGTCA CTTTC TGAGGCCG            TTATGGACGCATTAC  48 10
        rbsA NONE
        rbsC NONE
        rbsB 2527700 .. 2527723 +  -9.5  -2.84878   AAGAAAAGCAGGGCA          CGCGCCACC CTAACC GGTGGCGCA           CTTTGACTTGGAACC  70 112
        rbsK NONE
        rbsR 2529775 .. 2529799 +  -7.9  -2.81547   CCCATCGTGATAAAG          GTATAGTGGAA CTG TTCCACAGTAC          TAGTTCCTGTAAAAC  57 124
IUJ39_RS12515 2533880 .. 2533894 +  -4.2  -2.55351   AGGCGTCTTGCGATT               GAGACT ATG AGTCCC               CTTCGTCTAGAGGCC  44 101
IUJ39_RS12520 2534001 .. 2534036 +  -9.2  -4.00532   AGGCGTTGCCATCAG    TATCTCAAAACTGACT TACG AGTCACGTTTGAGATA     TTTGCTCTTTAAAAA  79 61
IUJ39_RS12525 2537157 .. 2537175 +  -7.4  -2.73903   GGCTTAACCTTACAA             CGCCGAAG ATG TTTTGGCG             GTTTGAGAGAATTTT  58 30
         rrf 2537477 .. 2537491 +  -7.8  -2.82742   AAATTAAGCAGTAGA               CCGGGA TAA TTCCGG               TAGTTGTAAAAGAAT  60 44
IUJ39_RS12535 2537584 .. 2537603 +  -2.8  -2.79684   GAGTCCCGTCCGTTC            CGCCACC CTAATTA GG-GGCG            TAGTTCAATTGGTAG  41 21
IUJ39_RS12540 2537680 .. 2537699 + -10.8  -5.81412   CCCTGCCAGAAATAA            TCCTTAGC AGAT GCTAAGGA             TTTTTTTTGCCTAAA 100 33
        maoP 2539065 .. 2539077 +  -6.9  -5.40072   GACGATTAATAAAAA                GGGCG TAA TGCCC                TTTTTTTACGCCAAC  91 32
        ilvL 2541077 .. 2541098 + -11.5  -6.09133   TTAACGAACTAAGAC           CCCCGCACC GAAA GGTCCGGGG            TTTTTTTTTGGCCTG 100 51
        ilvX NONE
        ilvG NONE
        ilvM NONE
        ilvE NONE
        ilvD NONE
        ilvA 2547532 .. 2547571 + -17.4  -3.53444   AGCGTGATCGCGCTT  CGC-TTATCCGGCCTAC ACGTCTC GTAGGCCGGATAAGGCG  TTTACGCCGCCATCC 100 48
        ilvC 2550138 .. 2550161 + -13.9   -5.1963   CAACCGGCAAAAAAA          GCCCGGAGT TGGAAC ACTCCGGGC           TTTTTATTAGTTACG 100 50
IUJ39_RS12610 NONE
IUJ39_RS12615 NONE
        pnuC 2552855 .. 2552880 + -11.9  -3.34239   GCTGATTTACCTTTT         CCAGGCTGC CCTGAAAA GCAGCCTGG          TCTTCTCTGAGTCTC  85 36
         rep 2555204 .. 2555218 +  -2.7  -4.30576   AGCTGTTCCGCAACA               CGGGG CGGTA CCGCG               TTTTGCTGATGAAGC  62 261
        trxA 2558253 .. 2558266 +  -3.7  -2.71364   GACAAAGGCGCTGTA               CGGTC GGGC GTCCG                TCATTCGACGAATGA  45 60
IUJ39_RS12645 NONE
         rho 2559910 .. 2559941 + -14.6  -4.65446   AACTTGGTCTTTACC      TGAAAACGCCACGT TTTT ACGTGGCGTTTTTG       TTTTATATCTGTAAT 100 39
        wecA NONE
        wzzE 2562309 .. 2562332 + -10.3  -3.06696   TTAGCAGCACCTCTG          CAGTAGGGG GCTGGG CCCCTGCTG           TCTATTCGAAGAGAA  73 37
        wecB NONE
        wecC NONE
        rffG NONE
        rfbA NONE
        rffC NONE
        rffA NONE
        wzxE NONE
IUJ39_RS12700 NONE
        wzyE NONE
        rffM NONE
IUJ39_RS12715 NONE
IUJ39_RS12720 NONE
IUJ39_RS12725 NONE
IUJ39_RS12730 NONE
IUJ39_RS12735 2575064 .. 2575079 + -11.8   -5.8901   CCGACCAATTTTGAA              CCCCGC TTCG GCGGGG               TTTTTTGTTTTCTGT 100 34
        cyaA 2582606 .. 2582618 +  -4.9   -4.3953   ATCATGACGCGCCGC                TATTG CAG CAATA                TTTCTTATAGTTAGC  68 3
IUJ39_RS12770 NONE
        dapF NONE
IUJ39_RS12780 NONE
        xerC NONE
        yigB 2586641 .. 2586666 + -11.1  -2.63579   CCCTACGATAAGTAG         GCCCGGTAAGCG AAG CGCC-ACCGGGC         GGTTTTAGTTTTCAT  74 100
        uvrD 2588883 .. 2588893 +  -3.2  -3.30124   ACTCTCATATTGCCG                 GATG ACG CGTC                 TTATCCGGCCTACGC  48 44
        ysgD 2589210 .. 2589223 +  -4.5  -4.32649   GCTGATAGCCTTAGC               GGTTG TCAG CGACC                TTTCATTTTTCCCGT  66 37
        corA 2590678 .. 2590692 +  -8.6  -4.84918   ATTCTTCCCGGTGCG               TCAGGT ACC ACCTGA               TTTTATCTTTGTCAG  93 418
        pldA 2594380 .. 2594401 + -12.3  -4.63479   TTGCAGTTTCTCTCG           CAGGCGCTG AAAA TAGCGCCTG            TTTTGATTTATGGTG 100 62
        recQ NONE
        rhtC 2596953 .. 2596976 +    -6  -2.62735   GTTAATTTACCTCCT          G-GCCGGATAA ACA TCATCCGGCAC          TACTATCACGCGTGT  53 36
        pldB 2598710 .. 2598720 +  -4.6  -3.91798   AGCCTAATTTATCCA                 GCGG AAA TCGC                 TTTGCTTAGAGGTTA  59 6
        yigL NONE
IUJ39_RS12860 2600827 .. 2600837 +  -3.2  -4.25104   GGCTAAATCTTCCGG                 CGTA ATC TGCG                 TTTTGCTGGCCAGCG  60 327
        metE 2604241 .. 2604258 +    -7   -4.4648   TCTGTTATGTTCCCT             GACGAC GATAAA GTCGTC              TTTTCTCGTGGCGCT  77 386
IUJ39_RS12875 2605615 .. 2605629 +  -2.8  -4.15044   GGTAAAGCATAGCTA               GCGT GGCTATG ACGC               TTTGTTGGGCCAACA  56 29
         udp 2607541 .. 2607557 +  -9.4   -5.2853   CCTCTCTTTTGCAAA              GGCCGA CGCGT TCGGCC              TTTTCTTTTTGCGTG 100 45
        rmuC 2609124 .. 2609141 +  -2.6  -3.11727   AGTCTTGGCGCAGAG             TAGGGC AAATTG GCCCAA              TCTGTTACACTTCTT  43 58
        ubiE NONE
        ubiJ NONE
        ubiB NONE
        tatA NONE
        tatB NONE
        tatC 2613992 .. 2614013 + -15.9  -2.62184   ACTGAAGACTAAACA           CAACCGCCC GTCA GGGCGGTTG            TCATATGGGGGCAAG 100 29
        tatD 2615086 .. 2615099 +  -5.9  -3.48036   GCACGAAATGGCTGA               CGCCG CGCG TGGCG                TTGATTGTAGTGGTA  58 299
        ubiD 2616986 .. 2617027 + -10.4  -3.08679   AATTGAAAGCGAACA CCGACA-TTTT-AGGCTGCG GCGA CGCGGCTTGAAAAATGTCGG TATTGACTCGACACC  73 39
         fre 2618209 .. 2618226 +  -2.5  -5.00616   AAACACATCGATATC             GCTGGCC GACA GTCCCGC              TTTTTTCAACGCCAG  71 475
        pepQ NONE
IUJ39_RS12960 NONE
        trkH NONE
        hemG 2625695 .. 2625721 +  -3.5  -2.85069   TAATATGCACACCCC         GCGCCGCTGAG AAAAG CGAAGCGGCAC         TGCTCTTTAACAATT  44 231
IUJ39_RS12975 2627481 .. 2627495 +  -4.2  -2.55351   AGGCGTCTTGCGATT               GAGACT ATG AGTCCC               CTTCGTCTAGAGGCC  44 101
IUJ39_RS12980 2627602 .. 2627637 +  -9.2  -4.00532   AGGCGTTGCCATCAG    TATCTCAAAACTGACT TACG AGTCACGTTTGAGATA     TTTGCTCTTTAAAAA  79 61
IUJ39_RS12985 2630758 .. 2630776 +  -7.4  -2.73903   GGCTTAACCTTACAA             CGCCGAAG ATG TTTTGGCG             GTTTGAGAGAATTTT  58 30
         rrf 2631077 .. 2631096 + -13.6  -5.15381   CAAACAAGTGAAAGA            GCCCATCC TGAC GGATGGGC             TTTTTTGCATCTGTT 100 43
IUJ39_RS13005 2632600 .. 2632610 +  -8.2  -3.62597   AACGGCGCTTTTACG                 CGCC CGC GGCG                 TTATTAAAGAGTAAA  69 1
IUJ39_RS13010 NONE
        dsbA 2634334 .. 2634352 +   -16  -4.59511   AAAAAATAAAAAGAA             CGCCGGTC ACT GACCGGCG             TTTTTACAAGATGTT 100 32
        polA 2638647 .. 2638673 + -18.1  -5.45652   GCTGAATATTTTAGC         CGCCCCAGTCA GTTTA TGACTGGGGCG         TTTTTTATTGGGCAT 100 250
IUJ39_RS13035 2639879 .. 2639932 + -14.1  -3.99405   AGCTCGTTAAGGGTC ATGAGTCAAGAAAAAAGGCGGCAGA TTAC TCTGTCGCCTTTTTTCTTTGCTTGC TTTCTGCTAGATTCC 100 31
        yihI 2640537 .. 2640555 +  -6.1   -3.3636   TTTGCCCGTCCTGCT             TATAACC CTTCC GGTTATA             TGTTATCTGGTGTGG  59 58
        hemN 2642155 .. 2642166 +  -3.6  -3.91144   CTGCACACAATACTG                CGGC TATC GCTG                 TTTGTGGCGTGTGGC  58 114
        typA 2648728 .. 2648746 + -14.6  -4.77157   TCCGGCACCAAAAAA             GCCGCTGA AAT TCAGCGGC             TTTTTAATACATTCG 100 64
IUJ39_RS13115 NONE
IUJ39_RS13120 2660374 .. 2660400 +    -8   -4.3821   AAAACGGCGCTGTGA         TGCAGGCGATAT TGG ACATCGTCTGCG         TTTCTATTGTCTTTT  79 89
        yihX NONE
IUJ39_RS13130 NONE
         dtd NONE
        fabY 2663417 .. 2663447 +  -4.7  -3.08679   CTGATGCTATTTATT      CACGA-GTGGCC GCGCGCCA GGCCACGTCGCG       TATTGCGTCCCGCGC  49 56
IUJ39_RS13155 2665304 .. 2665315 +  -2.2  -4.77036   GTCGGCGACGGCTTC                GACT TTCG GGTC                 TTTTTCCTGATACAG  68 183
        fdhD 2671947 .. 2671963 + -10.9   -3.6217   CCAATAGCCATTCTA              TCCTGAC CTT GTCAGGA              TCTTTGTAGTTGCAG  83 226
IUJ39_RS13185 2676755 .. 2676776 +  -8.7  -3.73783   CAGTTTTGATAATCA           GGAGTCGGT ATTT GTCGACTCC            TTCTTAAGTTAAATA  75 32
        bamE NONE
IUJ39_RS13195 2678153 .. 2678169 +  -9.4  -3.61654   CACCAGTGAGTCATA              TGGGCC TCAGT GGCCCA              TTTAAGATAAATCTA  77 32
IUJ39_RS13200 2679349 .. 2679360 +  -2.2  -4.91084   AGTTAAACTAAATAT                TCGG TCTA CTGA                 TTTTATTGTTGACTC  69 247
IUJ39_RS13235 2685062 .. 2685076 + -11.4  -4.89233   TATACCGTAGAAAGA               GCGCCT TTG AGGCGC               TTTTTGCTCTTAATG 100 48
IUJ39_RS13275 2689229 .. 2689259 +  -7.5  -2.52464   AGAACTGAGAATGGT      AGGCCCGGTAAGCG TAAG CGCT-ACCGGGCAA       TGGCTTAAGCCAGCC  57 33
        rhaS NONE
        rhaR NONE
        sodA 2702401 .. 2702418 +  -9.1  -5.76633   TGAAGCCCGTGAGAA             GCGAGTC TGAT GGCTCGC              TTTTTTTGTATCTGC 100 49
        yiiM 2703139 .. 2703188 +  -7.1  -3.55548   CGCCTGATAGCGTTG CG-CTTATCAGGCCTACGTACTGC TAT GAAAACCGTAGGCCGGATAAGGCG TTTACGCCGCTATTC  65 46
        cpxP 2705977 .. 2705995 + -14.6  -5.94713   CACCATCCCTGTCTT             CCCCCACA TGA TGTGGGGG             TTTTTTTTATAAAAT 100 65
IUJ39_RS13365 2707378 .. 2707411 +  -3.1   -3.5511   CTTACTGTTTTAAAC     CATCCGTTATACTACC GAC GGAAG-ATAGCGGGAG     TATTTATGAATCAAA  50 347
        fieF 2708411 .. 2708425 +  -2.9  -3.39432   GCAGGAAGGGATTGT               TATAC TATCT GTATA               TTCGTTGGATCGTTT  46 117
        pfkA NONE
IUJ39_RS13380 2710633 .. 2710655 +  -4.8  -5.95539   AAACCGTTTATAAAC           CCGGTAACGT ATT ATGTTGCCAG           TTTTTTTCTTTGCCA 100 39
IUJ39_RS13385 NONE
IUJ39_RS13390 2712946 .. 2712956 +    -4  -3.14881   ATATGCGCTGGAAAC                 TCAA GGA TTGA                 TTCATGGACAGATTG  48 125
IUJ39_RS13395 2714909 .. 2714929 +    -4  -4.11585   CAGTACGGCGAATTT            TTTGGCGA TCAGC TCGTCAGA            TTCTTTGTGATAAGT  60 502
IUJ39_RS13410 2716591 .. 2716620 + -13.7  -2.62396   GGCGCAGCCGTCATC       CGGCAGAACATCA CCAG TAATGTTCTGCCG        TCATATGCCCCGGTC  86 137
        zapB 2721801 .. 2721816 + -11.8   -5.1675   ACAACGCATAAAAAA              GGCGCC TTAC GGCGCC               TTTTTTGATCACTCG 100 223
        rpmE 2730244 .. 2730257 +  -9.5  -5.77988   TCGCCAGAAAAAAAA               GCGCC GCAG GGCGC                TTTTTTTGTATGTGT 100 45
IUJ39_RS13480 NONE
IUJ39_RS13485 2732772 .. 2732809 + -16.5  -2.87931   GTGAGTTCATGAACA   GATAAGAAGAGGTGGAA GCAA TCCCGCCTCTTCTTATC    TGTGTGAGCGGTGGG 100 45
        metB NONE
IUJ39_RS13500 2737069 .. 2737079 +  -3.2  -3.41051   CTGACATCAACCGCC                 TGGC GCA GCTA                 TTGTAATACGCCTGC  48 9
IUJ39_RS13515 2740436 .. 2740468 +  -4.9  -3.95036   TGTCGCGGCGTGACA      TGAAGAAAATTCATC TTT GCTGAATATTCCTCA      TTCTTTGGCGTGATT  61 65
        metF 2741488 .. 2741503 + -10.4  -4.26003   GGTTTATAACCTCCA              GCTCCC TGCC GGGAGC               TTTATTACATCTTAT  85 32
        katG 2743893 .. 2743912 + -11.4   -4.8622   CACCGGGCAAAAAAA            TCCCCGCG CGAT TGCGGGGA             TTTTTCATTGCAAGC 100 92
        argC NONE
        argB 2754972 .. 2754983 +  -3.6  -3.30124   ATTTCTGTGCCCGAT                GGCG ACTA TGCC                 TTATCGGGGCTACGA  48 43
        argH 2756550 .. 2756568 +  -9.5  -5.00616   GCAACGGTCATCAGA             GCCTGGC ATCAC GCCGGGC             TTTTTTACGCAAAAA  93 130
        oxyR 2758007 .. 2758028 +  -5.9   -3.5627   GCTGTTAACTGCTGC           TCGGTTTTG CCGA CAGAACTGA            TTTCCGGAATGGTAT  58 321
        fabR NONE
IUJ39_RS13590 2760325 .. 2760378 +    -9  -3.03865   TAAGGCGTTTACGCC G--CCTCGCCGTATGCCTGATG-GCGC GTT GCGCTTATCGGGCATACGGCGACAAAC ATTTACTTTGCGGTC  68 47
        btuB NONE
        murI 2764714 .. 2764740 +  -3.5  -2.85069   TAATATGCACACCCC         GCGCCGCTGAG AAAAG CGAAGCGGCAC         TGCTCTTTAACAATT  44 233
IUJ39_RS13610 2766445 .. 2766458 +  -2.3  -2.72471   AAGAAACGGTCTTTG               CAGTG CTCA CACAG                ATTGTCTGATGAAAA  40 46
IUJ39_RS13615 2766559 .. 2766572 +  -2.3  -4.20084   GTGGTTCAAGTCCAC               TCAGG CCTA CCAGA                TTTTCCCTGAATACT  57 14
IUJ39_RS13620 2766784 .. 2766817 +  -4.5  -4.49756   CGTTGATAAAAAATA     CTTCAGAGTGTACCT GAAA GGGTTCACTGCGAAG      TTTTGCTCTTTAAAA  69 52
IUJ39_RS13625 NONE
         rrf 2770344 .. 2770361 + -12.7  -3.67602   AAACAAGTGAAGAAG             CCCGTCC ATCA GGACGGG              ATTTTTTGCATCTGT  95 44
        murB NONE
        birA 2772469 .. 2772505 + -12.6  -3.91984   CTGCGAAGCGCCGAA   TAGTAAAAAAGGGGAGT CGGT ACTCCCCTTTTTT-CTG    TTATTTCCGCAATCT 100 23
IUJ39_RS13655 NONE
IUJ39_RS13660 NONE
IUJ39_RS13665 NONE
IUJ39_RS13670 2774348 .. 2774364 +  -6.5   -3.3071   TTAGCATTCAACAAG              TCGGGCA TGT TGCCTGG              TTGATGTGGTGATAT  59 74
         tuf 2775632 .. 2775649 + -11.3  -4.60924   CAATGCGCAATAAAA             GGGCATC ATTT GATGCCC              TTTTTGCACGCTTTC 100 60
        secE NONE
        nusG 2776797 .. 2776825 + -17.6  -5.35224   CTAATCGTTGCATAG        GGCGCGAAATTG ACATA CAATTTCGCGCC        TTTTGTTTTTATGGG 100 65
        rplK NONE
        rplA 2778064 .. 2778099 +  -3.2  -3.72695   TAAGATTAGTCTTTA    CGTGGGAGGTGATTTT GTCT ACAATCTTTGCCCACG     TTTGCTAACGAAGGT  53 38
        rplJ 2778834 .. 2778847 +  -8.1  -3.89695   GCGATGCGAAAGAAG               CTGCG TAAT CGCAG                TTGTCTTTATCAAGC  72 18
        rplL 2779319 .. 2779344 + -17.7  -4.64766   AGACATCAGGCTGAT         GGCTGGTGACT TTTT AGTCACCAGCC          TTTTTGCGCTGTAAG 100 65
        rpoB 2783644 .. 2783673 + -13.6   -3.4252   TCGCTCAAACAGGTC       ACTGGTGTCGGG GTAAAA CCCGACACCAGA        TTGTGCTAACTCCGA 100 44
        rpoC 2787933 .. 2787962 + -12.9  -2.53164   ACGAGTAATCGTTAA       ATGGTGGAGGGGT ATTT ATCCCTCCACCAG        CTTCATGCTGGATAC  84 33
IUJ39_RS13740 2792220 .. 2792232 +  -3.5  -3.54902   GGGAGTAAGAAGAGC                TTAAA TAA TTTAA                TTGGTTATTAAATAA  50 202
IUJ39_RS13745 2793020 .. 2793036 +  -7.3  -3.49077   TTTATACAGATATCG              GTCAGAT TAC ATCTGGC              TTAAATTTTTCTCAG  65 431
        nudC NONE
        hemE NONE
         nfi NONE
IUJ39_RS13805 NONE
        hupA NONE
IUJ39_RS13815 2804300 .. 2804315 +    -4  -3.72588   TGGCGGTCAGCAGCG              CGTTGT ACTC ATAACG               TTTAGATATCAGTTG  56 332
        zraS NONE
        zraR 2807824 .. 2807834 +  -2.4  -4.46212   CGAGGCGCGGCCGTC                 CCAC TCG GAGG                 TTTTCTCATCCAGCC  63 334
IUJ39_RS13845 2812642 .. 2812656 +  -4.2  -2.55351   AGGCGTCTTGCGATT               GAGACT ATG AGTCCC               CTTCGTCTAGAGGCC  44 101
IUJ39_RS13850 2812763 .. 2812798 +  -9.2  -4.00532   AGGCGTTGCCATCAG    TATCTCAAAACTGACT TACG AGTCACGTTTGAGATA     TTTGCTCTTTAAAAA  79 61
IUJ39_RS13855 2816002 .. 2816020 +  -7.4  -2.73903   GGCTTAACCTTACAA             CGCCGAAG ATG TTTTGGCG             GTTTGAGAGAATTTT  58 30
         rrf 2816326 .. 2816345 + -13.6  -5.24449   CAAACAAGTGAAAGA            GCCCATCC TGAC GGATGGGC             TTTTTTGCGTTTGTG 100 43
        metA 2818033 .. 2818048 + -10.4  -5.18355   CAGCATAATGAATCA              GGCACC TTCG GGTGCC               TTTTTCATTTTTGAA 100 71
        aceB NONE
        aceA 2821199 .. 2821210 +  -2.2  -2.64155   GCAGTTTTGATCAAT                GC-CC GAT GGCGC                TACGTTTACCGGACC  39 31
        aceK 2823547 .. 2823578 +  -3.7  -3.24021   GGTCGATAATAATCG      CCTGGTGGTCGCTC TGATC GAGT-ACCGCCAGA      TTGACTGTTTCGCCG  47 501
        metH 2827961 .. 2827983 + -14.2   -3.4214   TTTCCTTACAACATA           CAAGGCACTC ATT GGGTGCCTTG           TCTCTTTCTTACAAT 100 58
IUJ39_RS13900 2829855 .. 2829882 +   -12  -3.12999   TGGCATCGATACGTA        GGCCCGGTACGCG TAG CGC-TACCGGGCA        TTCAATGTGACCTGG  81 54
IUJ39_RS13910 2831345 .. 2831362 +    -2  -2.76418   CCCGACGATTTGATG             TGGTAA GTCACA TTACCG              ATATTTATATAGAAA  40 20
        rluF 2832290 .. 2832317 +  -4.9  -3.13743   GTCTGCCGCGCGTCG        GCGT-ATTCGCC GACCA GGAGAATGACGC        TTCCGTATCAGGTTT  52 42
         pgi 2836049 .. 2836066 +    -7  -5.26316   TAAGATAATAAAAAA             GCCGAT ATTCGC ATCGGC              TTTTTTATAAGATAA  87 73
        yjbE 2836654 .. 2836675 + -11.7  -4.26188   CGGTACGTTTAACCA           TAACCACAC TCCG GTGTGGTTA            TTTTGCCTCTCTGGA  95 44
IUJ39_RS13940 NONE
IUJ39_RS13945 NONE
IUJ39_RS13950 2840147 .. 2840163 +  -3.7  -3.36273   GATATGACCAGCGAC              CGGAA CGTGAAT TTCCG              TTAATATTCAGGCCG  50 5
        psiE 2840775 .. 2840788 +  -3.7  -4.29304   TCAGCTTATTGTATG               GCGGC TTTC GGCGC                TTTCTCTTCTGCTGG  62 81
        malK NONE
IUJ39_RS13985 2849414 .. 2849425 +  -7.2  -2.57581   GGATCAGGCGCCAGC                CGCC ATTC GGCG                 ATATGTTTGGGTTGG  57 113
        malM 2850441 .. 2850460 + -11.4  -5.75599   GATTTTGCAACAACT            GGTGCGTC TCCT GGCGCACC             TTTTTTTATCATTTC 100 59
        ubiC NONE
        ubiA 2852030 .. 2852054 +  -6.4  -2.72511   TACGTCATATCAGTC         GCCCGATAAGC TTAC GCC-ATCGGGC          ATTTCAGGCACTGGC  53 84
IUJ39_RS14010 2855070 .. 2855085 +    -4  -2.84839   TTTTTTGCGCTGTTT              GTGGTT CCAA AATCAC               CTTTAACTGTATATA  46 67
        lexA 2855914 .. 2855929 +  -4.6  -3.77008   TTTAACCTCTTGTCA              GGCTTG TCTC CATGCC               GTTTTTTACTTCCTC  58 194
        dinF NONE
IUJ39_RS14030 2857648 .. 2857675 +  -3.4  -4.71061   GTTTGCTTATGAAAA        TGGGCGGC ACCCTCGCTATC GTCGCCCA         TTTTTCGCTCTGGCT  66 82
IUJ39_RS14040 2859772 .. 2859792 + -10.4  -3.70068   TCTGAGGCGTTTTCA            CCGGAGGT ACTAC GCCTCCGG            TTTAGCGTTATGCTA  78 36
IUJ39_RS14045 2861570 .. 2861580 +    -4  -3.15354   ATTTCAGTCGTTTCT                 CTAT GTT ATAG                 TATTCCATTAAGCTA  48 307
        dusA 2862742 .. 2862765 +  -5.9  -4.77079   TAGTCAATTTCACCA          CGCCCTGCG CAGTGT TGCAGGGCA           TTTTATTGGTATCTC  76 56
        pspG 2863258 .. 2863278 + -12.6  -2.54371   GAACAAAATAAGAAA            GGGCTTCC CAGGT GGAAGCCC            AATTTCTTTGCAGAG  81 161
        dnaB NONE
         alr 2866874 .. 2866900 + -12.3  -3.44527   GTATATCGATTAAGT        GCGCGGAGTGCC GGAT GGCGCTC-GCGC         TTATCCTCCTACATC  93 28
        tyrB 2868345 .. 2868377 +  -2.8  -5.00616   CGCAGATAATTCTTC     CT-TTTGACCGTTAC TGGC GTTATGGTCAGATAG      TTTTTTGAGCAAAGA  70 121
        aphA 2869156 .. 2869174 + -10.3  -5.13521   GAGTACTAAAAACCA             GGAGAGC GACAG GCTCTCC             TTTTTTGCATGATTT  93 32
IUJ39_RS14085 NONE
IUJ39_RS14090 2870261 .. 2870277 +    -3  -3.27784   AAACGCGGCGGACTC             GCGGATG CCTT CATC-GC              TATCTTCTCTTGCCT  47 233
        ssb1 2874709 .. 2874724 +  -3.2  -2.84978   TTTTTTTGCCTCGAC              CACCCT CCGA AGAGTG               CTTGTCTTCCTCTTA  44 167
IUJ39_RS14115 NONE
IUJ39_RS14120 NONE
IUJ39_RS14125 NONE
IUJ39_RS14130 2880768 .. 2880802 +  -3.5  -4.47183   GAATTCTGTGATTGA     CCTTTCCTCTTTGGG AGATG CCAAAGGAGCTAAGG     TTTCTTTGGCTGGTC  64 95
IUJ39_RS14135 2904024 .. 2904049 +  -8.9  -2.83519   CGCATAACATAATGA         GGCCCCTCACC GTCA GGTGAGGGGAA          TGATCTATTTATGGA  66 34
IUJ39_RS14140 2906172 .. 2906202 + -15.6  -4.24963   ATTATTTTTATAAAA       CAGGCCATATCAAT TTT ATTGATCTGGCCTG       TTTTGAATAATTCTA 100 71
        soxR 2910988 .. 2911013 +  -9.8   -4.4572   ATAATCCCCCTAAAA         CTAAAGCGTC GCTAAG GGCGCTTTAG          TTTGTTTCCGGTCTT  89 73
        ghxP 2913626 .. 2913658 + -13.6  -4.07885   GTTCTACCTTCGTTC     TGAAAAACGGGTGGC GTTG GCCGCCCGTTTT-CA      TTTTCAGGACACATC 100 40
IUJ39_RS14185 2915550 .. 2915560 +  -6.8  -3.53012   CATGCCCAACTGCCA                 GCGT AGA ACGC                 TTTCCAGCGGCAGCC  61 168
IUJ39_RS14195 2916837 .. 2916865 +  -2.3  -2.71684   CTATGAGATGAGCAG        GCTAAACCGTGAG TAA CTTTCAGTTAAGC        GTTCTGTGCCTGATT  40 10
IUJ39_RS14200 2917530 .. 2917572 +  -5.7  -3.14132   TGGCGATGGTGATGT TCTGA-T-TTTCCTCCGACCC ACA GGGCCGGAGGAAACGGTAAGA TTAATGCGCCCGCCC  54 21
        nrfA NONE
        nrfB NONE
        nrfC NONE
        nrfD 2925849 .. 2925860 +  -3.6  -3.89501   CTGGACATCTTTCTT                CCTG AAGC CGGG                 TTTCTGGCGCTGTTG  55 42
        nrfG 2928749 .. 2928761 +  -3.4  -3.77722   GAAATAAAAAGCTTT                CCAT AACAA ATGG                TTATTCATCATTAAC  53 142
        gltP 2930417 .. 2930430 +  -3.8  -4.22475   TTAGATTCAACCAGT               GCAG CGCCTT CTGC                TTATTCTTTTCAATA  62 155
        proP 2952169 .. 2952218 +  -6.4  -2.59797   AGGTTCGCTTAATCT CTTGCTGGCACGCTCTCCTCCA TACCTT TGGAGGAGAGCGTCATGAAAAG CTATATTTATACAAG  53 53
        pmrR 2952331 .. 2952346 +  -6.8  -3.64466   TTTTTCAATAGCACC              CAGGCG CGGG TGCCTG               TTCTGTCTGTACAGT  64 56
        melA 2963431 .. 2963451 +  -6.1  -3.64599   GTTAATCTCCAGCCG            CGCTGGA CGGCAGA TCCGGCG            TTTAACCTCTACTAA  62 36
        melB 2964968 .. 2964991 +  -5.2  -4.59773   TGATTGCCTACCTGG          CGGCAGCCTT GACT AACGCTGCCA           TTTTTGCCCCTGGCG  73 59
IUJ39_RS14420 2965662 .. 2965691 +  -7.1  -2.77233   CTGCTAATAAGATCA       TCGGGTTCTGGGG GTAA CCCCAGAACTAAA        ATTTGGAACTTATCG  58 34
IUJ39_RS14425 NONE
IUJ39_RS14430 NONE
IUJ39_RS14435 NONE
IUJ39_RS14440 NONE
IUJ39_RS14445 NONE
IUJ39_RS14450 NONE
IUJ39_RS14455 2973848 .. 2973861 +  -6.7  -3.54424   AAAAGCCAGCATTTT               TCGTC CACG GACGA                TTTGCCCGCGTGCGA  61 500
IUJ39_RS14485 NONE
        dmsB NONE
IUJ39_RS14495 2984673 .. 2984684 +  -2.2  -5.03747   TACAATCTGTGGACG                CTGC CAAT GTAG                 TTTTTTGCCCGCTTT  71 14
IUJ39_RS14500 2985442 .. 2985464 +  -4.1  -3.90048   CGCGCCAGCGGGCAC           CGTCGGA TATTACAGT TCCGGCG           TCTTTTTAAAGCCGG  57 114
IUJ39_RS14510 2988220 .. 2988239 + -10.7  -6.04419   GTCCTCCTCATATTT            GCGGCAG CGTAGT CTGCCGC             TTTTTTTATTCTTTT 100 138
IUJ39_RS14525 2998600 .. 2998611 +    -3  -3.09759   AAGTCTATCTTGTAT                TTAC TGGA GTAA                 TTAAATAAATGTATT  43 10
IUJ39_RS14530 NONE
IUJ39_RS14535 3000870 .. 3000884 +  -7.1  -3.35298   CGCGAAAGATGTTAG               CGGTC TTTAT GACCG               TTGCTGCTTTGATTG  63 61
IUJ39_RS14540 NONE
IUJ39_RS14545 NONE
IUJ39_RS14550 3004534 .. 3004555 +  -9.5  -3.34029   TATACAATATGTAAA           GCGGTGATA TGAA TATTACCGC            TTATAAAACTATTTG  74 111
IUJ39_RS14575 3008298 .. 3008309 +  -4.4  -3.71848   AGGCTGGAAAATTTA                TACC AGTT GGTA                 TTGTTGATCCCGAAA  58 306
IUJ39_RS14585 3014535 .. 3014549 +  -4.9  -5.39721   TTACTGGCGACATAT               GGCGC GCTTA GCGTC               TTTTTTATGTCGTGC  87 137
IUJ39_RS14590 NONE
IUJ39_RS14595 3015794 .. 3015810 +  -2.9   -4.9725   CCGGCTCATCTGTAC              TTGCTGA TTG TCAGCGC              TTTTTATCTGCGCCT  70 420
        fxsA 3025824 .. 3025841 +  -5.5  -3.73873   CCGGAAGATAGTTGA             GCCAGAT AGTG ATCGGGC              TTATATTGCATTTGC  61 408
IUJ39_RS14650 NONE
        groL 3029147 .. 3029182 + -15.6  -4.16146   TATCTCGCGAAAAAT    GAGAAACCTCCGGGCA GAAA TGTCTGGAGGTTTTTC     TTTTGAGCCTCTTTT 100 170
IUJ39_RS14660 3029619 .. 3029667 + -14.7   -4.7373   GCCCGAACTGATATG CCTGAATCGTAACGCCCTCTGAA CGA TTCAGAGGGCGATATGGTTAACG TTTTTCCTGCGATAC 100 30
         efp 3032455 .. 3032476 + -12.3  -3.01831   CGTTATCGCGAAGTA           TGGTGCAGC GTAT GCTGCGCCA            TCGTATTTTTCGCGC  83 45
        ecnB 3032880 .. 3032902 + -17.8  -3.24827   AGCAGTAATCATCAA           CGGTACGGCA TGG TGCCGTACCG           TTAATCAATTCTCTT 100 33
        sugE 3034365 .. 3034375 +  -8.2  -3.42197   TTTTTTGCCACATCC                 CCCG ATC CGGG                 TTATAGCCTTTATTG  67 326
        epmA 3039350 .. 3039366 +  -9.4  -4.43221   TTCTGCGAGATGAAA              TGGCGC AATAA GCGCCA              TTTTGTAGCATCTTT  86 56
        yjeM 3041055 .. 3041087 + -14.1   -4.2123   GGAGTAAAGGCCGTA      TGCCGGATAAGACCC AAC GGGTCGCATCCGGCG      TTTATTGCCTGGATC 100 34
         orn 3047500 .. 3047513 +  -3.7  -4.42748   GCGACATCGCCAAAC               ACGCC TCAA GGCGG                TTATTTTTCAGGTCG  64 307
IUJ39_RS14760 NONE
IUJ39_RS14765 NONE
IUJ39_RS14770 3048766 .. 3048777 +  -4.4   -4.6971   CCACAACGAATATCG                CGTT GGGG AACG                 TTTTGTTCCGCTTTC  71 64
         nnr NONE
        tsaE 3052094 .. 3052110 +  -2.9  -3.12668   TCGGGTCGTTCGTTA              CTGGC GCGTTTA GCCGG              TTAGCTATAAAGGTG  43 5
        amiB NONE
        mutL NONE
        miaA NONE
         hfq 3056665 .. 3056699 +  -7.2   -3.6279   TCACGCGCTGTTTAT    CCATGTCGGGGGCG TCAGATAAT CGCCCCCG-C-TGG    TTATTAAGAGGGTTT  67 43
        hflX 3058116 .. 3058130 +  -3.5  -2.62616   GGCCTGAAAGATGAT              GCCTGC AACG GC-GGC               TCGTCTGAAGCATGG  42 142
        hflK NONE
        hflC 3060514 .. 3060539 +  -9.8  -5.18371   TTTAGACCAACAAAA         CCACC-GCATC CAGAA GATGCCGGTGG         TTTTCTTTTATAAGG 100 56
IUJ39_RS14825 NONE
        purA 3062303 .. 3062325 +  -2.6  -3.97947   CTGAACCGAAATAAA           TTAGCAGCCT GAC AGGTGGCTGG           TTTATCATCAATACA  54 168
        nsrR NONE
         rnr NONE
        rlmB 3066109 .. 3066126 +    -7  -6.60239   TTTTTTTCACAAAAA             CCATCC ATAATC GGATGG              TTTTTTTTTATTTTT 100 52
IUJ39_RS14860 NONE
IUJ39_RS14870 3069103 .. 3069116 +  -3.7  -3.58505   GTATCGCCTGTACGC               GCCAG TTAT CCGGC                TGTTGTTCTTCATAC  53 139
        yjfP 3071028 .. 3071043 +  -6.1  -2.76456   AGACTGTTTTCACTT              CCCTG CGGGCT CAGGG               TAATTGACTGGCTTT  51 308
        ulaA NONE
        ulaB NONE
        ulaC 3075206 .. 3075220 +  -2.7  -2.60496   TGGATTTAATTGATA               ACGCC ACTGC GGCGA               CTGTTTAAGGGAGAA  40 3
        ulaD NONE
IUJ39_RS14920 NONE
IUJ39_RS14925 3077927 .. 3077959 +  -2.5  -3.62522   AATTTTAACCATAAC      CCGCCGCAGAGATGG CGA CCTTTTCTGATGCTG      TTGTTCAAAAAATTA  50 511
IUJ39_RS14935 NONE
        rpsF NONE
        priB NONE
        rpsR 3079268 .. 3079278 +  -2.4  -2.50307   TCGCCATCAGTAATC                 GGTC ACG GTCC                 ATTAATACGACTTTG  39 28
        rplI 3079782 .. 3079812 +  -9.7  -5.45726   TCGTTTTTGCTAGCA       ACGAAACGTCGGC CCAGC GCCGGCGTTTTGC       TTTTTTTACCCTATC 100 51
IUJ39_RS14960 3081238 .. 3081253 +  -3.2  -4.07568   AGGCGCAACAGGCGC              CGC-CTG ATC CGGAGCG              TTTTGCGGCGCGACC  58 432
        fklB 3082363 .. 3082394 + -13.8  -3.36289   TCTCTAAGCAGCGAC      TCCTGTTCCTCTTC TGGT GAAGGGGAACAGGC       TTGATTCGACTAATG 100 34
        cycA 3084368 .. 3084382 +  -2.1  -4.51378   TTTGATCATCGGGAA               GAGGA TCTGT TCTTC               TTTTATCATATGGCT  63 343
IUJ39_RS14995 3087454 .. 3087470 +  -5.8  -3.78934   CCGTATTGCTGTGGA              TTGGCG CCAGA CGCCAG              TTATTATCCGCCGCC  63 230
        cysQ 3090712 .. 3090728 +  -7.9  -3.18199   GATCGGCAATGCCTA              CCGGCGG AAC CCGTTGG              TTAACTTCAAGGTTA  61 479
IUJ39_RS15015 3091378 .. 3091398 + -14.7  -3.50335   AAAAGTAAAAAAAAA            CGGCTCCTG AAT CAGGGGCCG            TTGATGTTTCTGGCA 100 66
        tamA 3095512 .. 3095522 +  -4.6  -2.62316   TTACAGTTTTACATC                 GGTC TGG GGCC                 TGAATTATGAGTTTA  46 5
        tamB NONE
IUJ39_RS15040 3099795 .. 3099812 + -12.7  -4.32067   ACGAGAGGTATAACA             CGCCACC TTCG GGTGGCG              TTGTTTTATGCAGTG 100 165
         hcp 3101244 .. 3101263 +  -2.1  -3.66883   ACTGGAAAGCTAGAG            GAGTACA AATAGA TGAACTC             TTTGACCTATCTTGA  49 14
IUJ39_RS15050 3101554 .. 3101574 + -13.3  -3.10905   GTAGCATCAAAAAAA            GCCCCTCAT AAA GTGAGGGGC            TTCAATAAGTTATGC  86 42
         mpl 3105060 .. 3105075 +    -6  -4.29977   ACTGGAAGATCTGAC              GCGCCG ATTT CGGCGG               TTTGTTGCCTTCTTT  72 177
        pmbA NONE
        cybC 3107531 .. 3107545 +  -2.1  -3.35597   TTTCTCATTTTATAC               GGCAA CGTCA TTGTC               TATTTCAGACATGCC  45 109
IUJ39_RS15085 NONE
IUJ39_RS15090 NONE
IUJ39_RS15095 3108735 .. 3108748 +  -3.1  -5.06414   ACAGAGTGGATTTCG               TC-GCG AAA CGCTGA               TTTTTGTTAAAAAGG  74 12
IUJ39_RS15105 NONE
IUJ39_RS15110 3110108 .. 3110130 +    -4  -2.78495   TGCAACGCGTACCGG           GGCCGTTGAC GAT GTCGACGGGG           TAATATTGGTGATAA  43 457
        mgtA 3120010 .. 3120050 +  -4.5  -4.91712   TGCGCTTACTGGGCC  TACAAATGCCGGATTAGGC GAA GCCGCATCCGGCACTGGCG  TTTTTATCGCTTAGC  75 68
IUJ39_RS15165 3122456 .. 3122472 +  -3.8  -4.48221   AGGGACGCTGCTGGG              GATTTA CGGAA TAAATC              TTTTGTCCCTTCGTA  67 261
        rraB 3130285 .. 3130306 + -10.9  -5.40474   CGCGTAGTATTACGG           TACGGCAGC GTTT GCTGTCGTA            TTTTTTTCAACAGGT 100 44
IUJ39_RS15225 NONE
IUJ39_RS15230 3135508 .. 3135524 +  -7.3  -5.24531   GTACCTAATAAAAAA              GGATCTT CTT GAGATCC              TTTTTTATCGGGCGT  91 50
        lptF NONE
        lptG 3144273 .. 3144285 +  -2.6  -4.50058   CGCCTCTTTGCCTTT                CGCT GCGGG GGCG                TTTTGCTTCTCGGTA  63 317
        idnK 3148477 .. 3148488 +  -7.2  -2.75844   CAGCTTTTAGCACCA                CCCG ATAG CGGG                 CTTTGCCGTCGCGAA  58 76
IUJ39_RS15305 3149886 .. 3149917 +  -4.4  -2.77036   TCTACTTACTTCTAT      CCACATATACCAAC GAAT GATGGTATAACTGG       TGGTATCTTCGGTTC  47 132
IUJ39_RS15310 3151236 .. 3151265 +  -6.6  -5.95539   TTTTTATAAGTAAAA       TGGCGTATTCAAT AACCA ATTGAG-ACGCCA       TTTTTTTATTTGCGA 100 45
IUJ39_RS15315 3152433 .. 3152451 +  -8.9  -5.19819   AAATCTGACAGTAAA             GAGGCTA ATCTA TAGCCTC             TTTTTAATTTTGTTT 100 261
IUJ39_RS15325 3153730 .. 3153749 +  -6.6  -5.01732   TACTAGCCGTACCTG            TTTATTTG ACGT CAAATAAA             TTTTTTCAAGCCATT  82 261
IUJ39_RS15330 NONE
IUJ39_RS15335 NONE
IUJ39_RS15340 NONE
IUJ39_RS15345 3158446 .. 3158468 +  -2.8  -4.92812   ATAGGTTTTAGCTAT           TGACATGGTA AAA TATTATGTTA           TTTATTTTCTTGTCA  70 49
IUJ39_RS15350 3159033 .. 3159048 +  -4.7  -4.43012   AATTAATGCTTAAAA              GCATC CTCTAA GATGC               TTTTACTGTTACCAT  66 125
IUJ39_RS15355 3160493 .. 3160512 +  -5.1  -4.53648   GGCTGAAAAAGATAA            TCACTTT CTTTAA AAAGTGA             TTTATGTTTTCTGTA  71 6
IUJ39_RS15380 NONE
IUJ39_RS15385 3164598 .. 3164614 +    -8  -3.32844   AAGCATTGTTAAATA              GACCAC GATTA GTGGTC              TTATGGCCTCCCCCA  65 86
        hxsD 3165173 .. 3165191 +  -3.1  -3.96148   CATCACTTCATTGAT             GAGCAAG AGCTG CTTGATC             TTTCTGATGAGCAAA  55 112
        hxsC NONE
        hxsA NONE
IUJ39_RS15410 NONE
IUJ39_RS15415 NONE
IUJ39_RS15420 NONE
IUJ39_RS15425 3173288 .. 3173314 +  -6.6  -3.30124   TTTTACACTACCAAT         TCGAAATGACTA ATA TAGTCTGTTCGA         TTATCACCAATAGGG  61 489
IUJ39_RS15430 3175055 .. 3175066 +  -4.4  -3.28522   AAAGTAGATGGTTAG                TCAG ATTT CTGA                 ATTTTGTACTCAATT  52 184
IUJ39_RS15450 3178301 .. 3178311 +  -4.6  -3.35526   ATCAAACAGTTCTGG                 CTGG AGT CCGG                 TTGCGTTTATGGTTA  52 240
IUJ39_RS15460 3180614 .. 3180625 +  -4.4  -5.82172   TCTAATTAAACTTGT                TCAG TCGT CTGA                 TTTTTTTGTCTTGCT 100 226
IUJ39_RS15465 3181385 .. 3181398 +  -3.7  -4.08216   CGTACATTTTACACC               GCACC CGTG GGAGC                TTTTCCAACGCCTGA  60 182
        uxuR 3183106 .. 3183121 +  -6.1  -5.03145   TTTACGTGACTTCAT              GCAGC CCGCCA GCTGC               TTTTTTCAGCAATTC  83 97
IUJ39_RS15485 3184806 .. 3184827 +  -3.1  -3.92522   ACGGCATTTTTTATA           TACAC-ATCA AGT TGATAGTGTG           TTTCTGACCTTGACG  55 208
IUJ39_RS15490 3186026 .. 3186036 +  -5.4  -4.32034   TATTATCAAACGGCG                 TCTG TTG CAGA                 TTTTCATCGTGATAA  70 455
IUJ39_RS15535 3196735 .. 3196747 +  -4.8  -4.26344   TTATTTATCCACGTT                GCAC TAACC GTGC                TTTTGATCCCGATAT  65 149
IUJ39_RS15545 3197298 .. 3197309 +  -5.8  -3.60296   GCGGAAGGCGTCATA                GAGC TTAA GCTC                 TTTAAACTGAACCTC  60 342
         tsr 3205454 .. 3205465 +  -7.2  -3.30124   ACAATGCCGGATGGC                GGCG TAAA CGCC                 TTATCCGGCCTACAG  63 104
IUJ39_RS15585 3208521 .. 3208547 + -10.8  -2.67662   AACCCGATCTTTTTT         CGGCGCGCCA CTTTTTC TGGCACGCCG         CTTGCTCTCTTTTAT  74 56
IUJ39_RS15590 NONE
IUJ39_RS15595 NONE
IUJ39_RS15600 NONE
IUJ39_RS15605 3211100 .. 3211111 +  -2.2  -4.17048   GTGGGGATTTTCGGT                TCCT GGAT AGGG                 TTATTTTAAGAGGGA  57 5
IUJ39_RS15610 NONE
IUJ39_RS15615 3213240 .. 3213251 +  -7.2  -3.42699   CCTGTGCCGGATGTC                GGCG TAAA CGCC                 TTATCATGCCTACGT  65 43
IUJ39_RS15645 NONE
        bglJ 3220833 .. 3220847 +  -2.8  -4.30043   TGTTCAGCATACGGG               CTTTTG CGC CGAAGG               TTGTTTTGAGTTTCT  62 266
IUJ39_RS15670 3224101 .. 3224114 +  -3.9  -3.37522   TCTAGTGGTTTTCAG               CTATT CGTC AATAG                TTAATTGCGTGGGAT  50 436
IUJ39_RS15695 NONE
        rimI NONE
        yjjG 3226964 .. 3226982 + -13.1  -3.14463   TTTCGTATTCAACAT             GCGCGGC CAAAC GCCGCGC             TTACTCAAGAAGATT  91 78
        prfC 3228603 .. 3228622 + -16.4  -4.14725   ACTGATCCCTTTCCG            GGCGCGGC ATCC GCCGCGCC             TTTATACTTTCCCTG 100 36
        osmY 3229624 .. 3229650 + -12.3  -2.62184   TAATTCGTCGTAATT        CGACCTCCCGGC GTTT GTCGGGAGG-CG         TAATGTGCACCACAC  81 38
IUJ39_RS15720 3229932 .. 3229950 + -14.6  -4.28049   ATATATTGCTACCAA             GCCAGTCC AGC GGACTGGC             TTTTACGGTTTTAGC 100 56
IUJ39_RS15725 NONE
IUJ39_RS15730 3231885 .. 3231935 +   -14   -4.1899   TGCCGGATGGCGGCC GCGCCTTATCCGGCCTACAAATGA TGC TGACCCGTAGGCCGGATAAGACGC TTTTGCGTCGCATCC 100 42
        deoC 3235418 .. 3235449 +    -8  -3.23274   CCGGATAAGGCGCTA      GCTGCCATCCGGC AAATTAG GCCTGATGGC-GC      TTCGCTTATCAGGCC  64 63
        deoA 3236835 .. 3236845 +    -4  -3.23855   TGAATAGTTGTATAC                 TGAT CTG ATCA                 ATTATTTTTGAAGCA  48 34
        deoB 3238130 .. 3238162 +  -5.5  -3.33265   ATGGCGCTACGCTTA      TCCGGCCTACGAGGA ACC TTTTTGTCGGCCTGA      TTGCATTTATGCCAT  56 54
        deoD 3239334 .. 3239344 +    -4  -3.55444   TCTGAAGGGCAAAGG                 TTTC GGC GAAA                 TTTGGCAAATCGGGC  51 428
        serB 3241795 .. 3241829 +  -3.5  -3.01712   AATCAGAAATAATGA    CATT-GTCGGCTGGCG GCTT CGTCATCCGGCAAACG     TGTTAACGAAAGAGG  45 29
        radA 3243285 .. 3243297 +  -9.1  -3.30124   GCGTTGTTGGATGGC                GACGC CTG GCGTC                TTATCCGGCCTACAA  71 77
        nadR 3244699 .. 3244711 +  -4.7  -4.39277   GCTCCAGCGCCTCGG                CGCCC AGC GTGCG                TTTCTTGTACTCTTC  67 157
        sltY NONE
        trpR 3249135 .. 3249157 +  -6.8  -4.09685   GCGACATCACCGGGC           CGAGGGCGTC GCC GGCGCGCACG           TTTTCAAGAATAACG  70 284
        gpmB 3250356 .. 3250366 +  -5.4  -2.50816   AAAGTCCTGCACGCC                 GGTT CCT AACC                 CTTCATAAGTGAACA  47 190
        creA 3252132 .. 3252144 +  -3.3   -3.4398   ACGCCGTCGCCGCTG                GTGCG CGC CGGAC                ATTTTTAACTTACCG  50 418
IUJ39_RS15840 3254167 .. 3254184 +  -7.7  -2.84218   AGCAGCAATAGTACA             GCTACGC AATA GTGTAGC              GTCTTTTACTGAATC  61 284
IUJ39_RS15845 NONE
        thrL 3255298 .. 3255320 +   -12  -5.75342   GAAACACAGAAAAAA           GCCCGCAC CTGAACA GTGCGGGC           TTTTTTTTCGACCAG 100 41
        thrA NONE
        thrB NONE
        thrC 3260046 .. 3260072 + -12.3  -3.18239   GCCAATAACCGCTGT        GCCCGGT-GGCG ATAT CGCTTACCGGGC         TTGGTGGCATCTATC  86 33
         tal 3263654 .. 3263682 +   -14  -5.31275   CGGGTTGCATGTTAA        TAGCCTGCTTTC TGGTT GAGAGCAGGCTA        TTTTTTATAGTGAAG 100 47
         mog NONE
IUJ39_RS15895 3266243 .. 3266255 +  -2.7  -4.32035   ATTACAATTTTAATA                TGAAT AAT ATTCG                TTGTTTAATTTTTTT  60 317
        dnaK 3268424 .. 3268466 + -16.2  -3.01924   CTTTGAACGGGTAAT TACTGGCACGGGCGAAGAGG TTT CCTCTCCGCCCGTGCATGCA TGTTAAGGGCAGATA 100 46
        dnaJ 3269643 .. 3269662 + -11.4  -5.33866   TTGTATTTTTCTTCA            GCCCGGGT GTTT ATCCGGGC             TTTTTTCTGCCTTTA 100 52
IUJ39_RS15910 NONE
IUJ39_RS15915 3271324 .. 3271339 +    -9  -4.49781   ATCCTCGCGCTATCA              GGCTCA TCCG TGAGCC               TTTTATGCGTATTTT  88 43
IUJ39_RS15930 3274877 .. 3274894 + -14.1  -4.36914   AGCTTCATGATGCAA             GCCCCGG TTTA CCGGGGC              TTTTCTCCAACAGGG 100 67
IUJ39_RS15935 3275516 .. 3275529 +  -3.7  -4.18018   CTTGTTCGTCAGTTT               GCCCC GGAT GTGGC                TTTTGGCTGGCAGAC  62 309
IUJ39_RS15945 3277525 .. 3277561 +  -4.6  -4.65078   TTTTCGCATAAGAAA   AAGCTGT-GATATTGCT GTGA AGCAATATCCGTAGCTG    TTTTGTTAACAATCT  71 368
IUJ39_RS15950 3278149 .. 3278167 +  -5.3  -5.14563   TTTAGCATGGTTTAT             TCCTGAT TCCTT ATCGGGA             TTTTTTCCTCGCCAG  79 20
IUJ39_RS15955 NONE
IUJ39_RS15960 NONE
IUJ39_RS15965 NONE
IUJ39_RS15970 NONE
IUJ39_RS15975 NONE
IUJ39_RS15980 3284362 .. 3284381 + -11.4  -3.68261   CCTATTTTTACAGGC            GTCTCCCG ATAG CGGGAGGC             TTTCCGATCTTATCG  87 41
IUJ39_RS15985 NONE
IUJ39_RS15990 3286061 .. 3286075 +  -2.9  -4.21773   CCTTGAGCACTTTTT               TATCA CGTAA TGATA               TTATTTCTCTTAACG  60 503
IUJ39_RS16000 3287804 .. 3287822 +    -6  -3.07192   TTATAAATAATCTCT             TGTTGAGC ATG GTTCAGCA             TATATTCCAGACATT  53 330
IUJ39_RS16010 3290193 .. 3290223 +   -17  -3.72242   TTGAATAACAAAACA       TGTTATGCGGCCGA TAA TCGACCGCATAACA       TTATGGTTTATTTAC 100 33
IUJ39_RS16025 3294794 .. 3294823 + -13.7  -4.54026   TTAGGGCGATGCCCA       CCTGATCCGGTCAC TCT GTG-CTGGATCAGG       TTCTTTTATTTCAGG 100 72
IUJ39_RS16030 3296044 .. 3296062 +  -3.9   -3.6543   TTTGTTTGAAGGTAG             TATTCGC AGGGA GTGAATA             TGTTTTCACACATTA  53 32
IUJ39_RS16035 3297371 .. 3297428 +  -7.2  -2.98447   TTGGTCGACATAAAA ATCCAGAGTATTAATTTTCGTGGTCCC CATGA GGGCCGATGAAA-TTAATACACTGGAG ATTTATCATGAATAC  59 87
IUJ39_RS16040 3299187 .. 3299204 + -11.3  -4.49556   GACTACACTAAAGTG             GTCCGGT GTAA ACCGGAC              TTTGTTTCGTAAAAA 100 61
        nhaA 3300498 .. 3300517 + -13.6  -3.14136   GGTACGAAGGAAAGG            GGGAGCGA GACA TCGCTCCC             TTAAGTCATTGATCA  93 43
        nhaR 3301532 .. 3301545 +  -9.5  -5.00616   GCAGGTATAAAAAAA               CCCGC GAAA GCGGG                TTTTTTCACAAAGCG  93 110
IUJ39_RS16060 NONE
        ribF NONE
        ileS NONE
        lspA NONE
        fkpB NONE
        ispH 3308033 .. 3308053 + -14.1  -5.24129   CCGGTTATGCGAAGA            TGCCAGACA CGC TGTCTGGCA            TTTTTTATGGAGCAG 100 53
        rihC 3309004 .. 3309032 +  -7.5  -3.77413   CTCCGCTTATAACCT        CATGACGCTAC TTATTCC GTAACGTCATG        TCTTTTGCTGATATT  68 44
        dapB 3310038 .. 3310056 + -11.8  -5.49579   TTAATTGATTACAAA             GGGCAATA TAT TATTGCCC             TTTTGTTTTTTGTAG 100 80
        carA NONE
        carB 3316772 .. 3316791 +   -10  -5.87688   TATCGCTTGTTTAAA            CGGTTCCT GAAA GGGAACCG             TTTTTTTTACATTAT 100 78
        caiF 3317450 .. 3317463 +  -5.3  -2.87132   ACTGTTTCGGACAGG               CGTAT CAAC ATACG                TCTGTCCGGGAAAAG  50 78
IUJ39_RS16125 3318501 .. 3318520 +  -3.6  -4.42386   TTGTCTTATAGCTTG            TTATAGTC ACCT GTCTATAA             TTTTGTCAATAAAAA  62 456
IUJ39_RS16135 3321208 .. 3321229 +  -4.4  -3.98661   GTAATTTCTTTCAGG          GCGGCGACCG CCAG CGG-CGC-GC           TTTGTACTAGCTGTC  60 275
IUJ39_RS16165 NONE
IUJ39_RS16170 NONE
IUJ39_RS16175 NONE
        fixX 3331413 .. 3331427 +  -9.2  -3.30124   ATTGACTGCCGGATG               GCGCGG TAA CTGCGC               TTATCCGGCCTACGC  71 40
IUJ39_RS16185 NONE
IUJ39_RS16190 NONE
        kefF NONE
        kefC NONE
        folA 3336709 .. 3336736 +  -6.8  -3.85539   CAAACCACGGCTTCA        GCGGCGCAGGGG CATT TTCCGGCGACGC         TTTGCTGTACATATC  66 404
        djlA 3344752 .. 3344785 + -10.9  -2.83403   TTTTTTGGCTCACGT     TCGCGGAACTGGCGT TTCA GCTCCCGTTCCGCGG      CTTTGGTCAGCGCGA  70 495
        araC NONE
IUJ39_RS16285 3357767 .. 3357787 +  -9.6  -2.54298   GGCGACCACAATTGA            GCGGGGCG CAATT CGCGCCGC            ATCTTCTACGCTGTG  62 180
IUJ39_RS16310 3363016 .. 3363038 +   -12  -5.95539   AGCCTAAAATCACCC           GCCAGCAGAT AAT ACCTGCTGGC           TTTTTTTATTTCGGC 100 87
IUJ39_RS16315 3364487 .. 3364532 +  -6.1  -3.54424   CGTTCATCATACAGT GACGGCGGAAAGCGTCGATCTC AAA GGGATA-ACGTTTGTCGCCGGC TTTCACGACCTGCGC  58 261
        leuO 3370842 .. 3370878 + -16.2  -4.86133   AAGCGATAAAGACGG    GCAGAATAAATCAGAA ATGCC TTCTGGTTTATTCTGC    TTTTTAATATATATC 100 32
        ilvI 3373258 .. 3373279 +  -2.3  -4.40358   CCGTTCAACTGGCGG           GCA-CCAG CGATAAA CTGGATGC           TTTTCTGGCCTCGCT  59 404
         cra 3374936 .. 3374953 +  -3.4  -4.10161   ACTTTATATTTTTCT             CGGATT ATATTG AGTCCG              TTTTAAACGGTGGTG  57 393
        mraZ NONE
        rsmH NONE
        ftsL NONE
        ftsI NONE
        murE NONE
        murF NONE
        mraY NONE
        murD NONE
        ftsW NONE
        murG 3386358 .. 3386376 + -10.2  -3.01422   CGTCGCCAGTGAAGT             CATCCGGG TTG CCCGGACG             TAATTTGTAGCGGTG  73 4
        murC NONE
IUJ39_RS16420 NONE
        ftsQ NONE
        ftsA NONE
        ftsZ 3392247 .. 3392268 +  -6.7  -3.12021   TGCTAAACTGGCCCG           CCGAA-TGTA TAG TACACTTCGG           TTGGATAGGTTATTT  58 75
        lpxC 3393239 .. 3393282 + -11.1  -6.09888   GTTGTCGTATAAATT CGACTGGTTAACCTGGC ACTCTCTCCG GCCAGGTGAGCTAGTCG TTTTTTTTATTACCC 100 49
IUJ39_RS16445 3395962 .. 3395975 +  -5.9   -4.6635   GATTAAATCGAAATA               CGGCG CGTT CGCTG                TTTTCTTAGCCATTT  74 245
        secM 3396637 .. 3396653 + -11.5   -2.8704   TTTAACTTTATTGTA              GCTCCGC GGC GCGGGGC              GTTTGAGATTTTATT  78 54
        secA 3399489 .. 3399504 + -10.4  -5.64274   AACACGGATAAAAAG              GCGCAG GCGA CTGCGC               TTTTTTTATGGATAC 100 140
        mutT 3399924 .. 3399944 +  -8.3  -2.68494   ATGTGCGCATTAACT            GGGGATC TCAATAC GATCCCC            GTTGATCTTATTATC  63 28
IUJ39_RS16485 3403398 .. 3403410 +  -5.5  -3.82218   GCCAACCAGACCGGA                TTGCC CGC GGCGA                TTTCCTGATGTACCT  61 327
        ampD NONE
        ampE 3408851 .. 3408875 + -10.1  -3.40403   GAGCGTATCTGCTGG          TGGAATGCC AAAATCA GGCATTCCA          TTCTCATCCCAGCGA  76 109
        pdhR 3414066 .. 3414092 +  -6.6  -3.38812   ACGCAAGAATTAGTT         TTTTCTGGCAGA ACG TTAGCCAGAAGA         TGTTGTTAAAAAAGC  61 28
        aceE NONE
        aceF 3418783 .. 3418813 + -13.5  -3.78877   GTCTGGTGATGTAAA      CAAAAAAGCCGGCC CGAC GGCCGG-TTTTTTG       TCTTTTAATCTCATG 100 27
        lpdA 3420496 .. 3420511 + -10.4  -5.76633   TCCAATACAGAACAA              GCGGCT TTGC AGCCGC               TTTTTTTATGTGTGA 100 113
IUJ39_RS16555 3421335 .. 3421349 +  -3.4  -3.72893   TGGACCTAACGGACT               GGGGGC CTC GCCTGC               TTTCATCGGCCAGTA  53 324
        acnB 3426486 .. 3426505 + -11.4  -6.11229   ACCGGGCCTACAAAA            CCCATCGC AACT GCGGTGGG             TTTTTTTATTTTCAT 100 64
        yacL NONE
IUJ39_RS16580 3428221 .. 3428265 +  -3.2  -3.53563   CATCCTTTACCTAGA TTGTTATTTCGCT-ATATATCT TAA AGAAATGTGAGCGAG-TAACAA TTTGCGGAAGGATAT  50 114
IUJ39_RS16585 3431373 .. 3431393 +  -9.7  -4.72272   AATAAAATACATCGT            CGGGCAG ATTGATC CTGCCCG            TTTTTAATGCAAGGA  91 36
        cueO 3436509 .. 3436528 +   -15  -3.35358   CGCCACCCGGCATAA            TGCCCGGC ATGC GCCGGGCA             TTAATGGTTATTTCG 100 76
         hpt 3439723 .. 3439748 +  -7.4  -3.78124   CCGGGCAAGCAAAGC         GCCCCCCGGC AACCCC GCCGGATGGC          TTATTGATGGTTAAT  68 77
IUJ39_RS16635 NONE
IUJ39_RS16640 3442220 .. 3442248 +   -14  -3.06073   CGTAGCTGATACGGT        TCTCCTCTTCTC CTGGC GGGAAGAGGAGA        CTTTTGACGGCTGTC  87 32
IUJ39_RS16645 NONE
IUJ39_RS16650 3444495 .. 3444512 +  -5.5  -4.59109   GCTTTGAGAAAATTC             TCAGGCA GTAT TGCCCGA              TTTTTACGGGGTGTC  72 472
        hrpB 3454103 .. 3454125 +  -4.2  -3.28368   ACGGCCCCAACGCGG          CG-CACGAA GAAGTA TTCGTGACG           TGTTATACGTTGCCT  50 5
        mrcB 3456772 .. 3456786 +  -3.5  -2.82516   TTAAGGAGATGTTCG               GCGGT AATTA ATCGC               TATAATGGTGCCGGG  43 15
        fhuA 3459328 .. 3459349 + -13.7   -4.1466   TTTCTAATCTCTTTT           TGGGCACGG CTTG CCGTGCCCG            TTTTACAAGTTGGCT 100 34
        fhuC NONE
        fhuD NONE
        fhuB 3463052 .. 3463079 +  -5.7  -3.25823   AAGCCGGATGGCGTA       TGCGCTTATCCGG CCTA CCG-ATA-GCGCA        TTCATATAGGCCGGG  54 42
        clcA 3466055 .. 3466066 +  -4.4  -3.53563   CTGAAATTTACCCAA                TGAC CCAT GTCA                 TTTGGAGCAGAATAT  54 81
        erpA 3466491 .. 3466512 + -12.3  -3.39595   GGTAGGCCCGGTAAG           CGAAGCGCC ACCG GGCGCTTTG            TTATACCTCATTCGG  90 92
         dgt NONE
        degP 3471854 .. 3471886 +  -3.5  -4.53705   GATGCAGTAATCACC     TTGT--CCCCCTTCC ACTAC GGAAGGGGGTAACAC     TTTTCTGTGAACCTT  64 31
        cdaR 3473316 .. 3473331 +  -2.6  -3.61103   CCAGATGGCGCAAAT              CGTCAAG AAT CTT-ACG              TTTGAGATCGAGTTC  49 184
IUJ39_RS16780 3475196 .. 3475209 +  -9.5  -2.95668   TTCAGTTATGCAAAG               GGGGC GGTC GCCCC                GTTTCTCACTCGCTT  70 52
        rpsB 3480877 .. 3480897 +   -14  -4.89729   TATCACGTTTGGTTA            GGGGGCCT GTCTA AGGCCCCC            TTTTTCACTTTTATA 100 202
         tsf 3481822 .. 3481843 + -13.7  -4.72333   TCTTAATCTTCTTTA           GGAGCCGCC TAAG GGCGGCTTC            TTTTTGCGTCTGATT 100 35
        pyrH 3482820 .. 3482842 +   -10  -3.21912   CAGCCTTCAGTTGTT           CAAATTCGTT CCT GACGAATTTG           TTACTCAGTTGCCGC  74 162
         frr 3483707 .. 3483756 + -16.5  -4.89393   GCGGTTGAGTGGTGT ACAAAGCGCCGCGCAGAAGACAT TATC AGGTCTCCTGTGCGGCGTTTTGC TTTTTATCCCGTTTC 100 83
        ispC 3485091 .. 3485108 +  -8.4  -5.28176   TTTTCGGTCAGGTTA             GCCGTG GTTTGA CACGGC              TTTTTTGTGGATACA  95 130
        ispU NONE
        cdsA NONE
        rseP 3488279 .. 3488296 +  -2.7  -3.33696   ACTTTTCAATGATTT             CTCTC GGTTGTAA GAGAG              TTAGTTAGGAAGAAC  46 13
        bamA NONE
         skp NONE
        lpxD 3492422 .. 3492455 + -13.1  -3.57992   GTTGCCATTCTTTTC     CGGCCTGTCACATTC ATAC GATTGCGGCAGGCCG      TGTTATTATTGCCTT 100 55
        fabZ 3492936 .. 3492957 +  -4.3  -2.79098   ACCATGATGTGTGCT           CGTAGCCGG GAGG CCTGATACG            TGATTGATAAATCCG  47 8
        lpxA NONE
        lpxB NONE
        rnhB NONE
        dnaE NONE
        accA 3500127 .. 3500147 + -16.9  -5.75342   TCTCATTTTTCCAAA            GAGGCCGGA TAA TCCGGCCTC            TTTTTTTTGGACGAG 100 188
IUJ39_RS16885 3502057 .. 3502083 +   -21  -3.41013   TTGTAATAAAATAAA         TCCTGTCGGTGC AGA GCACCGACAGGA         TTGTGACTATGCTTA 100 35
IUJ39_RS16895 NONE
        tilS 3506389 .. 3506404 + -10.4  -4.18018   CACCAGTAAGTTCGC              GGCAGC CCAG GCTGCC               TTTTCCCTGACCGAC  85 351
IUJ39_RS16915 NONE
        arfB NONE
        nlpE 3508455 .. 3508475 + -16.9  -3.74077   ACTAACTAAATAAAA            GGCCTCGCA TGG TGCGAGGCC            TTTACATATCTGCCG 100 32
        gmhB 3515010 .. 3515024 +  -6.4  -3.12351   GGTTGAAGAGAAAAA               TCCTGA AAT TCAGGG               TTGACTCTGAAAGAG  56 169
IUJ39_RS16965 3516797 .. 3516810 +  -2.3  -2.72471   AAGAAACGGTCTTTG               CAGTG CTCA CACAG                ATTGTCTGATGAAAA  40 46
IUJ39_RS16970 3516911 .. 3516924 +  -2.3  -4.20084   GTGGTTCAAGTCCAC               TCAGG CCTA CCAGA                TTTTCCCTGAATACT  57 14
IUJ39_RS16975 3517136 .. 3517169 +  -4.5  -4.49756   CGTTGATAAAAAATA     CTTCAGAGTGTACCT GAAA GGGTTCACTGCGAAG      TTTTGCTCTTTAAAA  69 52
IUJ39_RS16980 3520192 .. 3520210 +  -7.4  -2.73903   GGCTTAACCTTACAA             CGCCGAAG ATG TTTTGGCG             GTTTGAGAGAATTTT  58 30
         rrf 3520512 .. 3520527 +  -6.8  -2.82742   AAATTAAGCAGTAGA              CCGGGA TAAA TTCCGG               TAGTTGTAAAAGAAT  55 44
IUJ39_RS16990 3520635 .. 3520656 +  -8.7  -5.39221   CGCCACTTATTAAGA           GCCCTGAGT CTAT GTTCAGGGC            TTTTTTGGTTATTGT 100 36
IUJ39_RS17000 3522687 .. 3522711 + -13.5  -3.54926   GTCAGGTCTGCCGTG          GGGCAGGCCTC AAC GGGGGCTGCCC          TCTATTTTTCCCATA 100 47
IUJ39_RS17020 3526603 .. 3526620 +  -3.3  -4.21989   TACGGGTTTCTTTTC             CGCTGTT TTCC AGCCGCG              TTTCTTCCAGTTATG  60 211
        dnaQ 3527659 .. 3527673 +  -3.5  -2.81186   AAAAAGGGCGGAAGT               TGCCT TTGGC GGGCA               TAATTCATCCCTTTT  43 8
IUJ39_RS17035 3527897 .. 3527921 + -14.4  -5.82036   TCCGCCACTATTTGA          GGCCATGCTA TTGAT TAGCATGGCC          TTTTTTCTTTGTTAT 100 34
IUJ39_RS17045 3529527 .. 3529550 +  -6.1   -2.9911   CAAACGTTCTCTGCC          GGGACATAA AACCGC TTATGTTCC           TGATGTTTTCCTTAT  56 235
        tssB NONE
        tssC NONE
        tssK NONE
        tssL NONE
IUJ39_RS17070 NONE
         hcp 3536268 .. 3536290 + -13.4  -5.80951   CCGCGTAAGTCACGA           GCGGGCGGAG TCT CTCTGTCCGC           TTTTTTGTTTTGCAT 100 33
        tssH NONE
IUJ39_RS17085 NONE
IUJ39_RS17090 NONE
IUJ39_RS17095 NONE
        vgrG 3542924 .. 3542940 +    -3  -2.83403   AGATCAAAGTTGAAC              TTGGAT AAGAA ATCCAG              ATTTAATCAGAACAC  41 18
IUJ39_RS17105 NONE
IUJ39_RS17110 3546059 .. 3546075 +  -2.3  -3.05935   CGTTGTGTAGAGAAT              TAACATT GAA AATGATA              TTAACTGGAGGATAT  42 23
IUJ39_RS17115 NONE
IUJ39_RS17120 3547559 .. 3547569 +  -6.8  -2.66634   GGTCTCGGCTTTACC                 GCGA TAA TCGC                 TGCTATACTGGCATG  55 66
        tssA 3552457 .. 3552469 +  -3.3  -3.05384   ATCCAGCCCGTGCCG                CCGTG CTT TGCGG                TTAAATCCACAGGAA  45 9
        tssF NONE
        tssG NONE
        tssJ NONE
        tssE NONE
IUJ39_RS17155 NONE
IUJ39_RS17160 3557285 .. 3557310 +  -6.1   -3.6849   GGAACCAGTATTAAT         CGGGTACAGGA AAGG TTCTTTGCCCG          TTATTCACATTAAAT  62 27
IUJ39_RS17165 NONE
IUJ39_RS17170 3560237 .. 3560257 +  -2.5  -3.13403   GGGGTATGCAGCCAC            CCTGGTC GGAAAGG GAACAGG            TGTTGATGCAGGCGC  45 227
        lpcA 3567327 .. 3567364 +  -4.1  -2.90496   CAGACCTTTTTTCTG   TGCTTTGCCGGATAAGCG CTG TGCC-ATCCGGCAATGAA   TCATTTAAAGGCAGG  46 42
IUJ39_RS17205 3568510 .. 3568521 +  -4.4  -3.15841   CGCGATCGTAGGCAT                TTGG AAAA CCAA                 TGTTGATGGCCTTAT  49 382
        dinB 3570410 .. 3570433 + -13.8  -2.96899   TTCATCATTAAAAAA          TCCGCGCCCC TGCT GTGGCGCGGA           TATCATTACTTCGCG  87 264
         gpt 3572615 .. 3572639 + -17.1  -4.78572   ATCAGCAGTTTTTCA          GAGCGCCCGGC AAT GCCGGGCGCTG          TTTTATTGGTTACAA 100 40
        frsA NONE
         crl 3574393 .. 3574436 + -13.8  -2.78018   AAATTGTCGGCATAA CCTCATGCCGGATAGCGGCG TTAA CGCCGCTATCCGGCACAACA TGGTTCATCAGAACT  86 26
        proB 3576858 .. 3576871 +  -3.1  -3.18264   CCCGGTCGCTGTCCA               TCGTG ATGA CATGA                TTACTCGATAAGGAA  46 1
        proA 3578204 .. 3578217 +  -5.3  -3.30619   ATTGACGCACCGCCC               GGTTA GTTT TAACC                TTCTACCCCGTGATT  54 85
IUJ39_RS17255 3578764 .. 3578781 +  -8.4  -3.33037   AGGCTGATTCGTTCA             GGGCGA CCCCAA TCGCCC              TTCCTGCTTTCGCGT  69 453
IUJ39_RS17305 3586083 .. 3586103 +  -6.8  -3.21595   AAGGGCAATAAAAAA            CCCGGC ATGGTTGGG GCCGGG            TTAGTAATAAAACTT  59 30
IUJ39_RS17325 NONE
IUJ39_RS17330 3588690 .. 3588714 +  -3.5  -3.97834   ACCAAAAAGGCGAAA         GCCG-CGGTG CTCGAA CACCAACGGC          TTTCTGGTGGAATTA  55 52
IUJ39_RS17335 NONE
IUJ39_RS17340 3590504 .. 3590515 +  -2.2  -3.86897   CTGAATAAGTTCATT                GCAG CGAG TTGC                 TTTGTGCAGGATGGA  53 180
IUJ39_RS17350 NONE
IUJ39_RS17355 NONE
IUJ39_RS17360 NONE
IUJ39_RS17365 NONE
IUJ39_RS17370 NONE
IUJ39_RS17375 3593575 .. 3593585 +  -6.8  -2.77235   CCGATGGTTATAACG                 CTGC CAT GCAG                 TCGTTCGGTAATTAC  55 128
IUJ39_RS17385 3594284 .. 3594297 +  -5.9  -5.09225   AGTGTTGCGTCATAA               CCCGT TGCG GCGGG                TTTTTTGCCTAAAAT  80 367
IUJ39_RS17390 3594688 .. 3594709 +  -2.3  -2.88023   GGCGCGCATTTTTCA           GAATACCGCA ATT TGCG-TATCC           CTTTGATGCTGCTGC  41 57
IUJ39_RS17395 NONE
IUJ39_RS17400 NONE
IUJ39_RS17405 NONE
IUJ39_RS17410 NONE
IUJ39_RS17415 NONE
IUJ39_RS17420 3597378 .. 3597399 +  -7.2  -4.72846   AAACAAACATTCAAA           CCCTGCGG TTAATC CCGTGGGG            TTTTTGCGTATCTGG  82 105
IUJ39_RS17425 3598853 .. 3598870 + -10.5   -4.4267   TCTCATCAACCTAAA             GGCTGCC ATTT GGCGGCC              TTTTAAATTTTCAGG  87 27
IUJ39_RS17430 NONE
IUJ39_RS17435 NONE
IUJ39_RS17440 3600348 .. 3600364 +  -8.1   -3.5362   CGTTACTCAGGTAGT              GATTTCA TTA TGAAATC              TATTTCTCGGCCTTC  67 73
IUJ39_RS17450 3601175 .. 3601190 +    -9  -5.18357   ATAGCCATCACAAAG              GCCACT TTCG AGTGGC               TTTTTTAATGGCTTA 100 66
IUJ39_RS17455 NONE
IUJ39_RS17460 NONE
        terL NONE
IUJ39_RS17470 NONE
IUJ39_RS17475 NONE
IUJ39_RS17480 NONE
IUJ39_RS17485 NONE
IUJ39_RS17490 NONE
IUJ39_RS17495 NONE
IUJ39_RS17500 NONE
IUJ39_RS17505 NONE
IUJ39_RS17510 NONE
IUJ39_RS17515 NONE
IUJ39_RS17520 NONE
IUJ39_RS17525 NONE
IUJ39_RS17530 NONE
IUJ39_RS17535 NONE
IUJ39_RS17540 NONE
IUJ39_RS17545 NONE
IUJ39_RS17550 3616845 .. 3616857 +  -2.7  -5.37345   CGAAGTCTTTTTTTA                TTTTG AGG CAAGA                TTTTTTATCGTTCAA  85 157
IUJ39_RS17560 NONE
IUJ39_RS17565 NONE
IUJ39_RS17570 NONE
IUJ39_RS17575 NONE
IUJ39_RS17580 NONE
IUJ39_RS17585 3621703 .. 3621723 + -10.4  -4.68511   CCTTTATCATAAAAA            TAGGGCGC TTCAC GCGCCCTG            TTTCTTTATCTTGGA  91 268
IUJ39_RS17610 NONE
IUJ39_RS17615 NONE
IUJ39_RS17620 NONE
IUJ39_RS17625 3629527 .. 3629540 +  -3.1  -4.51097   AGAAAGCCAAATATA               CATCT TTTG AGGTG                TTTTATCATCGTTGA  64 16
IUJ39_RS17630 3631486 .. 3631511 +  -4.1  -4.71426   TAACCGGGTAATTTG         TTAAAGCTTCTG GCG CAGA-GCTGTAA         TTTTCTTAATGACCA  70 89
IUJ39_RS17640 3633367 .. 3633382 +  -3.2  -3.29263   GCATCATCCCTCTTT              TGTGAG TCAT CTCTCA               TTCTCACCGAACTGT  48 193
IUJ39_RS17655 3634623 .. 3634637 +    -5  -4.47707   CTCTTCGCCTCGCCG               CGTCAA GGC TTGATG               TTATTTTTGATGCAG  71 285
IUJ39_RS17660 3635922 .. 3635953 +   -13  -2.78547   TCGCACGTAAAAAGT      ACGCTCCTGGCG-CA TAC TGTCGCCGGGAGCGC      TCCTTCCTCCCGTCG  85 31
IUJ39_RS17665 NONE
IUJ39_RS17670 3641095 .. 3641123 +  -8.8   -3.4285   ATAGACATTATAAAA        TGACCGCAACGC AGCGA GCGCTCCGGTCA        TTCTCACTTCGCTCA  71 75
        ssaA NONE
IUJ39_RS17680 NONE
        cydB NONE
IUJ39_RS17690 3644096 .. 3644126 + -17.6  -3.57462   GACTGATACTTCCCT       GGTGCGCTTTCGTC TCT GGCGGAAGCGCGCC       TTTGCCAATGCGCTA 100 39
        yahO 3645297 .. 3645321 + -12.2   -5.7946   GTTGGATCATAAAAA         TACCCGCCTGG ATTT CC-GGCGGGTA          TTTTTTTATTGGCAA 100 45
        prpB 3648140 .. 3648164 +  -5.5  -4.21936   GCCGGATAAACGTAG          TGCCATCCGGC ATT GCCTGGGGGCG          TTTTCGCCTTATCAG  67 41
        prpC NONE
IUJ39_RS17720 NONE
        prpE 3653134 .. 3653149 +  -3.2  -3.53091   GCGCCAAGCGGCAAC              TCTGTG CGCT CGCGGA               TTTCACGCAGCACGT  49 336
        sbmA NONE
        yaiW 3658807 .. 3658820 +  -2.3  -4.08767   GTTTCTCGATGTTTC               CCGCT GAAC AGCGA                TTTTGAGAGAGTGAA  56 334
IUJ39_RS17760 3659319 .. 3659346 +  -6.2  -3.27902   TGATAAGGCAAAAGA        CGCCCGATAAACG TAG CGCT-ACCGGGCG        TGTGTTATTACATCG  59 16
IUJ39_RS17770 3661361 .. 3661377 +  -2.9  -3.68036   CCAGAAAAAAGATAG              CTTGCTA AGC TAGCGCG              TATTTTCAGCTACTT  50 147
IUJ39_RS17775 3662625 .. 3662654 + -13.1   -2.9732   AGCCCAATAGATTTG       TATCGTAACGG-TG CTC CAGCCGTTACGATA       TGGTTTAAATTAAAA  86 31
        iraP 3663230 .. 3663286 + -24.2  -2.82635   TATGAAATAACCATA GCCGCTTCGTTTTTATTTTGCTCTGT ATTAA ACAGAAGAAAATAAAAACGAAGCGGC TATGGTAATAACAGT 100 79
        psiF 3663853 .. 3663886 +  -9.6  -2.83164   AAAGCGGCGTAGTGC     TATCGGGTGAGCCT CGACAA ACGCTCACCCGAAA      TCTCATACTCCCTCC  69 29
IUJ39_RS17800 NONE
        aroL NONE
IUJ39_RS17810 NONE
IUJ39_RS17815 NONE
        ppnP 3669201 .. 3669213 +  -3.3  -5.03314   TACGCAGCAGCGCCA                GCGTA TCT TCCGC                TTTTTTCGCGCTGGC  77 524
         mak 3670919 .. 3670929 +  -8.2  -4.36914   CGCCCAGAAGTTCGC                 CGCC TTT GGCG                 TTTTGTAGCAGCAAG  81 259
        phoB 3677295 .. 3677336 +  -8.2  -3.85389   CGACCCGCTTTTAAT GCCTTTTCCGCCAGCAGATC AGAG GAT-TA-TGGCGGAGAAGGC TTTCCATTCTTGAGG  71 27
        phoR 3678685 .. 3678706 +  -9.5  -4.90525   AAGTATAACTTTCCA           TAAGTCAGC GGAT GCTGGCTTA            TTTTCTTTGCAGTTA  93 52
        brnQ 3680408 .. 3680430 + -16.3  -5.64304   TGACATATGTGTACA           CCACGGGGC TTAAC GCCCCGTGG           TTTTTTATTGTGTTG 100 47
        proY 3681952 .. 3681964 +  -3.3  -2.99257   AGTTATCCTTTAAAT                CCCTG TGG CAAGG                TGGCTTTTTTTCAGC  45 146
        malZ 3683847 .. 3683864 + -12.7   -3.7829   AGCACGCGTAAAAAA             GGCTCGC TATC GCGAGCC              TTTCGTCAATATACT 100 61
        queA 3686444 .. 3686454 +  -8.2  -3.38046   GTCGGGGAATAAGTC                 CGCG ATG CGCG                 TATTTAACGTCAGAC  65 29
         tgt NONE
        yajC NONE
        secD NONE
        secF 3690859 .. 3690878 +  -9.2  -4.65895   ATATAACACTCTACA            TCCCGGCC ATCT GACCGGGA             TTTTTCCATGCGCCA  90 51
        yajD 3691358 .. 3691383 +  -6.1   -4.4767   AAGTGAGAGCAAAGA         TGCCGGAGCGCA GTC TCTGC-CCGGCA         TTTTATCGTGAATAC  76 35
        nrdR NONE
        ribD NONE
        ribE NONE
        nusB 3695847 .. 3695890 +  -3.1  -5.67063   AGTGATTCACAGGCC GGAAAGGTAGCGGGCGAACG ATACC CGT-CGTCTCCGGCCTTTTC TTTTTTTCTGCTGAG  95 36
        thiL NONE
        pgpA 3697844 .. 3697857 +  -5.2  -4.63932   CACCGCTTCCTGCGC               CGCC CATAAT GGCG                TTTTCTTCCAGCGTC  75 484
        thiI 3702570 .. 3702584 +  -9.2  -3.37533   AATCGATAGCAGTGC               CCGGCC CCT GGCTGG               TTAATAATTTTACCC  71 236
IUJ39_RS17990 3704699 .. 3704710 +  -4.4  -4.17657   TACGCCTTTCATTGA                CAAC AGCC GTTG                 TTTTAGCCTGTCGTC  64 189
        bolA 3715760 .. 3715773 +  -9.5  -5.23292   AGAATTATGTGAAAA               CGGCC TGCG GGCCG                TTTTGTTTTGTCTGA 100 86
         tig 3717381 .. 3717402 + -11.6  -5.60993   AAATTCGCACAAGAA           CCCGTCAC CTTCCA GTGACGGG            TTTTTTTGTCACGCA 100 62
        clpP NONE
        clpX 3719645 .. 3719663 +   -11   -4.3623   CAGTTAGCCAAAAAA             GGGGGGAT TTT ATCTCCCC             TTTCGTTTTTCCTGT  90 58
         lon 3722185 .. 3722214 +  -8.6  -5.72616   CGCTAATAAAAACAG       GGCTGGCAGG-CT ATTTC GGACTTGCCAGCC       TTTTTTTGTATAGCT 100 58
        hupB 3722669 .. 3722688 +   -10  -5.45652   GTGACAAAGTACAAG            GGCGCATC AATT GATGTGCC             TTTTTTATTGGCGAT 100 61
        ppiD 3724844 .. 3724859 + -11.8  -4.39571   GTTGTATCCCACAAA              GGCCGC TTTC GCGGCC               TTTTCCATTTCTGAG  95 73
IUJ39_RS18075 3725357 .. 3725379 +  -8.5  -3.00601   TTTGCCAGACTAAGA           GAGGTCATA CCAGT TATGGCCTC           TGTACTTGTCGTTTA  66 62
IUJ39_RS18080 3725869 .. 3725926 +  -4.2  -3.73982   CAGGCCTACAAATGC TTCGGTTTTGTAGGCCGGATA-AGACGC ATCA GCGTCGCTATCCGGCA-ACGTAAGCGGA TTATCTTACTGTAGA  55 71
         cof 3729329 .. 3729347 + -10.3   -5.9003   GATCTCTTCCAGCAA             GCCAGAC GTTCA GTCTGGC             TTTTTTTATTGGTTT 100 43
        decR NONE
IUJ39_RS18110 NONE
IUJ39_RS18115 3734611 .. 3734627 +  -8.7  -5.50723   AAATCTCATCCATCA              TGCACCG TCA TGGTGCA              TTTTTCTTTTCCTGC 100 60
        glnK NONE
        amtB 3736451 .. 3736491 + -15.6  -4.95876   ACGCGTGATTGCGCA CCATGCCGGATGGCGACGC GAAA GCGTT-TTATCCGGCATGG  TTTTTAATTGTGATT 100 33
IUJ39_RS18135 3738151 .. 3738171 + -16.9  -3.14132   TTAATCCTGCGCCAA            CCCTCTCCG TTA CGGAGAGGG            TTAATACACCCAGCG 100 37
         ffs 3738872 .. 3738907 +  -8.2  -3.68619   CCTGACCATAATGCA    CG-CCATGCTGGCGTAG CCA CTGCGCTTGCCTGGTCG    TTTCGATGCCTTCAG  69 155
IUJ39_RS18155 NONE
        ykgO 3740998 .. 3741021 + -10.3   -5.4505   AGTTCAGGGAAAGCA          GTGCGTACC AGGGAG GGTGCGCAC           TTTTTTATTACCGGC 100 50
        acrR 3748633 .. 3748650 +  -9.9  -2.61116   GCCCCCTGATACTAT             TCCAGGA AAAC TCCTGGA              CGTTTTCTGTCTCGC  68 32
        mscK 3752395 .. 3752413 +    -8   -3.8901   CAGTTGACGAATCAG             CGCCCCGG GTT CTGCGGCG             TTTCCTGCTTTCAAC  72 313
IUJ39_RS18220 3754323 .. 3754347 +  -2.8  -4.07568   CGCTGTTGCAATTGT          CGGTCGCA GCCAGTAAA TTCGACCG          TTTTCGAGCACAGGC  56 52
         apt 3755038 .. 3755062 + -16.5  -3.09671   CTTTAGCCAGAGACA          CAACCTCGCTG TAT CGGCGAGGTTG          TGTTAGCATTACCCT 100 63
        dnaX 3757038 .. 3757056 +  -9.6  -3.30124   ATCCGCCCCATTTGA             TCGTAAGC CCG GCTTGCGA             TTGTGAACCATCAAG  74 26
IUJ39_RS18235 3757392 .. 3757405 +  -2.3  -2.64099   ATGCAACTGCCGCCA               GGCTT TAAG ATGCC                GTTCTGATGCAAACC  39 5
        recR 3758093 .. 3758109 +  -3.7  -3.67558   CCCTCAACGTATTTT              TACCATT AAA AATGGCA              TTGTTGAGGTCTATC  53 101
        htpG 3760092 .. 3760103 +  -5.8  -4.44461   ATAAGGTGTTTACAC                TGCC ATCC GGCA                 TTTTCTCGCCTTATT  70 115
         adk 3760890 .. 3760923 +  -3.1  -2.71593   CTCGGTTAATCCGTA     AATTGCCCGATAAGCA TAA TGCC-ATCGGGCAACA     TCGCTTTGTGCCTCT  43 32
        hemH 3762006 .. 3762033 +  -7.6   -4.3534   GCTATAAAAAAGCGC        GCGCCGTC-CTGC AAG GCATCGTCGGCGC        TTTTCATCATTCGCG  78 59
IUJ39_RS18265 3764780 .. 3764804 +  -7.8  -3.14211   CGGCATTGCCCAGCA          CGGCGCGAAT TCCGC GTTCGCGCAG          TTCATCCACGCGGGT  61 408
        ushA 3769712 .. 3769728 +  -5.8  -4.56597   GTTGCGCCACCATCG              GGTCGG CCATA TCGACC              TTTTTCGCGCCCAGA  74 309
        cueR 3774335 .. 3774351 +  -2.1  -4.63218   GCCCGCGCTGGTTAA              GTCGTCT GTC GGTCGGC              TTTTGTTCCCGCACG  66 211
        fetA 3776316 .. 3776334 +    -3  -2.78495   CGGAGAGATGCAGGA             GGCGCGTT ATG AACGAGCA             TAATATTACTAATAC  41 4
        fetB 3777396 .. 3777408 +  -9.1  -2.57344   GTTGCGTCGCCAAAG                CCGCA TCT TGCGG                ATTCTCCGCGACCTG  62 318
IUJ39_RS18340 NONE
IUJ39_RS18345 3782731 .. 3782754 + -12.4  -3.05069   TAATGTGAATAATTT          CGCGCCGGTT TTTA AAGCGGCGCG           TACTTGTTTAGTCGC  83 45
IUJ39_RS18355 NONE
        sfbB NONE
IUJ39_RS18365 3785853 .. 3785876 +   -11  -5.27923   AACTTCTTGCCATGT          GCCGCGAAAA ACGA TATTCGCGGC           TTTTTTCTCCAGTTG 100 103
        cysS 3791819 .. 3791833 +  -7.1  -4.18494   TCGTGATATTCAGTG               CACGC CTGCA GCGTG               TTTTCGATAAGCGTG  72 381
        fimA NONE
        fimI 3794354 .. 3794369 +  -2.4  -3.63367   CAGAAGTGTGGTTTA              CGCTGG TTTA CCCGTG               ATTTTTCTTGCCGAC  49 9
        fimC NONE
IUJ39_RS18425 NONE
        fimH NONE
        sfmF 3799458 .. 3799468 +  -5.4  -4.67607   ATTACTCAATAAAAG                 TTGC TCA GCAA                 TTTCTTTGTTAGACA  75 185
IUJ39_RS18455 3802853 .. 3802902 + -10.8  -3.33003   TCTCCGGCCAGTTTT TGCCTTGCATAGGTAACC-GGCGG TATG CCGCCAGGTGAGCTATGCG-GGCG TTCCTCGTTATATTC  80 274
        rclA 3817821 .. 3817837 +  -9.4  -5.85178   AACATAGATAGCGTA              GCCCTG TTAAT CAGGGC              TTTTTTTTGCCTGTT 100 41
        rclB NONE
        rclC 3818800 .. 3818832 + -12.8  -5.28176   TCTTGATGCCGCGAT     TCGTCGGATGGCTGC GTAG GC-GCCATCCGACAA      TTTTTTATGGCTGAC 100 55
        pheP 3821762 .. 3821792 + -11.9  -2.57721   GGCCTCTTAATTTTT       TTGCCCGATCCCG GATCA TGCGATCGGGCAA       TCCATTAATGCGTTA  79 31
IUJ39_RS18560 3825335 .. 3825349 +  -2.8  -2.63723   TTTGATGAGACGCCA               GGGA AGGCCAA TCCC               GTTCGTTCGTGACAC  40 36
IUJ39_RS18565 3828647 .. 3828669 +    -7   -3.1706   GTCCGTGGAAATACT           CTCCGCTA TGTATGC TGGCGGAG           TTGATCCACTGCATT  57 452
IUJ39_RS18615 3835918 .. 3835930 +  -4.8  -2.60571   TCGGCAATAAATTCC                CGCA TATAT TGCG                CTTCATTACCGCCTT  45 379
         fes 3841393 .. 3841411 +    -3  -3.13475   CACGCTTTAACCGGG             CACATGTC CAC GACAGGAG             TTGAGTATGGAATTC  45 31
IUJ39_RS18645 NONE
        entF 3845557 .. 3845578 + -10.3  -5.10208   AATTAAATCGCGAAA           CCTCATAAT AATT ATTATGAGG            TTTTTATTGCAATTA  93 65
   wzz(fepE) 3846902 .. 3846940 + -18.4  -2.92091   GATTAGCCTGATTTA   CACGAAAAAGCCGGATAG CGA TTATCCGGCTTTTTCGTA   TGTATGGGTAACTAT 100 30
        entS 3851396 .. 3851409 +  -2.3  -3.53012   ATCGTGGCGCTTACC               CTGGC TTTT GCTGG                TTTGCAGCCCACGGG  47 328
        entC NONE
        entE NONE
IUJ39_RS18695 NONE
        entA NONE
        entH 3857310 .. 3857321 +  -4.4  -2.62616   AAAAAGGAAGTGATC                CAGT TAAC ACTG                 TAATGTAAAAAATGA  46 77
        cstA 3859561 .. 3859589 +  -3.7  -3.05816   ATCTTTTTTCATTAA        TAGCCCTCTCC AGGACAA GGGGAGGGCGC        TTGAATGACAGGTGA  47 40
IUJ39_RS18715 3860119 .. 3860131 +  -3.4  -4.02132   CATAAGCCACTTTCG                TTCC GTGCA GGAA                TTTCTCCGTTTGCGG  58 337
IUJ39_RS18725 3862260 .. 3862292 +  -7.8  -2.54325   CACGCTCTGGAGAAG      CGACGGTTTGCA AAAAGCTCC TGCAGACCGTTG      ATCTGTTTCAGGCGC  59 54
        ahpC 3867264 .. 3867283 + -10.7  -4.63218   CCATCCGGCATCCTA            CAGGCGC TAATTT GCGCCTG             TTTTATTCCGCACCA  95 95
        ahpF 3868967 .. 3868988 +  -8.7  -5.72616   ACCTGCGATATAAAA           CCGCCTG TTTACTGT CAGGCGG            TTTTTTTCTGTCAAT 100 57
IUJ39_RS18765 3870991 .. 3871010 + -12.2  -2.87881   AAGGGCTAACGGAAA            GAGGATGC GTAG GCATCCTC             TGTGTAAACGCATTA  80 56
        dpiA 3882189 .. 3882211 +  -3.5  -4.14392   CGGAACGGACGTTCG           TTTCACC ACTTCAAAC GGTGAAA           TTTTCGCCATTCCGG  57 175
        pagP 3884566 .. 3884602 +  -8.7  -3.59508   CTGGACAAAATGCAC    CACAATTGCTGTACTGG TAC CCGACACAGCATTTGTG    TCTATTTTTCATGTA  72 149
        cspE 3884864 .. 3884880 + -10.8  -5.43866   AGCAAGATTTCAAAA              CCCGCC CTCCT GGCGGG              TTTTTTTGGCGCTTA 100 50
IUJ39_RS18845 3886132 .. 3886145 +  -6.7  -3.91801   TGCAGCAGCGACGAT               TTGCG CCAC CGCAA                TTATTATGATGTTTT  68 3
        tatE 3886520 .. 3886534 + -11.4   -5.1675   CTGCAGAGTAAAAAA               CCGGCA ATT TGCCGG               TTTTTTACTGCCTGA 100 59
        cobD 3898688 .. 3898701 +  -8.1  -3.04461   GGGTCAGATGCTGTT               CCAGC CACT GCTGG                TGTTGCGCCTGCGTC  59 191
IUJ39_RS18935 3904217 .. 3904236 +  -5.7  -3.85389   ACCCTTCGCGATCCA            CGTCCACC ATTAC GGTGG-CG            TTTGGCTTATTCCCC  61 177
        ubiF 3915853 .. 3915883 + -12.6  -4.07568   CCTGATGGCGCTGCT       CTTATCAGGCCTGC CTT GTAGGCCGGGTAAG       TTTTACCACCCCCGG 100 52
        nagE 3925149 .. 3925172 +   -11  -5.75342   TCACAGGAAACATAA          GCGGCAGAGGG AAA CCTTC-GCCGC          TTTTTTTTACCGCAA 100 84
        glnS 3927013 .. 3927029 + -13.7  -5.38951   TAAATCCCTTCCAAA              CGCCGCA ATC TGCGGCG              TTTTTTCTCTGCATT 100 70
        chiP 3928824 .. 3928850 +  -8.6  -3.01712   ATTTTCTGATGTCCG         ATGCGGCAGGCT GCC GGTCTGCCGCGC         TGTTGAGGAACGACC  66 32
        chiQ 3929221 .. 3929237 + -12.3  -2.62111   GCCTTGCCGCCCACG              GGGGGAA CGT TTCCCCC              ATGCTTTTTTCAGGC  81 47
        seqA NONE
         pgm 3936890 .. 3936905 + -10.4  -5.47159   GATATGGAAGAAAAA              GGAGCC GTAA GGCTCC               TTTTTTGTATTAACG 100 46
IUJ39_RS19170 3950162 .. 3950176 + -11.4  -5.03994   CTGAAAAACCGTCAG               CCGCCA CGC TGGCGG               TTTTTGTCTATGAGC 100 52
         hcp NONE
IUJ39_RS19180 3953150 .. 3953166 + -10.1  -5.60993   GGCGCTTCTGAAAAA              CCGTCAG CCG CTGGCGG              TTTTTTTATGCGCCA 100 49
        phrB 3954848 .. 3954860 +  -6.9  -3.56821   TTAACCGCGCCGCTG                GCGTC AAA GGCGC                TTTGCGAGGTCTGGT  63 215
        ybgI 3957266 .. 3957278 +  -2.6  -2.97503   CTGAGGGGGAATAAA                GTGC AGCGA GCGC                GTTGTTATCTGTTAG  42 41
        pxpB NONE
IUJ39_RS19205 NONE
        pxpA 3959906 .. 3959959 +  -4.4  -2.76815   TGAAAGCCGTCGTCA GGCCAGAGTCACCCGCTTTCTGCAG CAGTC CAGCGATAAGTGGATGAC-CGGGCC CTTGTTGGAAAAACT  47 359
         nei 3961264 .. 3961278 +  -8.5  -2.70932   GCATTGCCATGATTA               GCGCC ATATC GGCGC               TGCTTCCGACCGCGA  60 133
IUJ39_RS19240 3964002 .. 3964016 +  -7.2  -4.59293   TATGCTTTTTCTGGT               GTTGTT TGT AACAAC               TTTGTTTAATGTTTG  82 54
        sdhC 3964750 .. 3964763 +  -3.1  -2.78384   CGTGCTTTCACTTCT               CGCAGG AGT CCT-CG               TATGGTAAGCAACGC  43 4
        sdhD NONE
        sdhA NONE
        sdhB 3967746 .. 3967766 + -14.1  -2.55351   ACAAGTGAACCCCGG            CACGCATAC GGC GTATGCGTG            GTTAGTATCCACGGC  87 160
        sucA NONE
        odhB 3971932 .. 3971943 +  -7.2  -3.30124   TCATTGCCGTATGGC                GGCG TAAA CGCC                 TTATCCGGCCTAAAG  63 107
        sucC NONE
        sucD 3974083 .. 3974101 + -14.6    -5.252   GTTTTCGACATGGTT             GGCCACCT TTA AGGTGGCC             TTTTTTATGGCGATA 100 76
IUJ39_RS19285 3975425 .. 3975435 +  -2.6   -3.8615   CCTGAGTGATTATAT                 TAAT TTT ATTA                 TTTAAACTTTTTTTG  54 323
IUJ39_RS19290 3976652 .. 3976671 +    -5  -3.25823   CCACAAGATCGTAGC            GCGGAT CGGCCAGC ATCCGC             TTACTCTCCAGCCAA  49 299
IUJ39_RS19340 3987640 .. 3987657 +  -3.3  -3.86822   AAATAAATTTGTATT             GGGGCAT GCGT GTGACCC              TTTCTAACGGGGTTC  55 360
        cydA NONE
        cydB NONE
        cydX NONE
        ybgE 3990875 .. 3990900 +   -12  -4.82154   AAACCTCCTTAAAAA         TATAGGGGCT TGCATC AGCCCCTATA          TTTTTACTCTCCCTT 100 46
        ybgC NONE
        tolQ NONE
        tolR NONE
        tolA NONE
        tolB NONE
         pal 3995842 .. 3995853 +  -2.2  -2.52896   GGTTTACTAAGAGAA                TTGC ATGA GCAG                 TAACTTCAGACATCA  39 31
        cpoB 3996641 .. 3996678 + -13.6  -2.93723   GCGATGTAATGCGTA   CCATGCGACCAGAAAA CGCCTT TTTTCTGGTCGCGTCG    TGTGATTCCTAAGCA  87 32
IUJ39_RS19400 NONE
IUJ39_RS19405 3997080 .. 3997092 +  -4.8  -2.76189   TCGATCCCGTCATCA                CCCA CCACT TGGG                TCGTTAGCTCAGTTG  49 19
IUJ39_RS19410 3997212 .. 3997227 +  -2.4  -3.14881   CAGGTAATACCCGAA              CGGGGC GTTA GCTCAG               TTGGTAGAGCAGTTG  44 72
IUJ39_RS19415 3997282 .. 3997301 +  -6.4  -3.14211   TCGAATCCTGCACGC            CCCACC AATACCGC GGTGGG             TTCCTGAAAAAGAGT  57 19
IUJ39_RS19420 3997415 .. 3997445 + -16.3  -3.08344   GCACGACCCACCAGT       GTAAAAAGGCGCC CTAAA GGCGCCTTTTTGC       TATCTGTGATTTAAG 100 28
        nadA NONE
        pnuC 3999653 .. 3999669 +  -2.1   -3.1875   GTGTACGTTGCGAAC              TTCGGGG ATT TCCCGGC              TTAAATTGCGCTGTA  43 259
        aroG 4002244 .. 4002260 + -13.7  -5.64274   TCATAACGTGTTAAA              CCGGCCT GCA AGGCCGG              TTTTTTTATCGCTGG 100 44
        chbC NONE
        chbR NONE
IUJ39_RS19470 NONE
        chbG 4008194 .. 4008218 +   -10  -2.52623   GATCTGTAATAAATA         GCCCGGCAGAT TAGC GTC-GCCGGGC          ATATTGTCAGAACGG  70 32
IUJ39_RS19510 4015313 .. 4015330 +  -9.8   -5.1356   GCTGATTTCCGCAAA             CGCCCG CTCAGT CGGGCG              TTTTTGTTACTCAAG  93 36
        modA NONE
        modB NONE
        modC 4018182 .. 4018205 +  -4.6  -3.88823   CATTGACCCTCCCTG          CGCTTCTATCC ACT GGGTA-AGGCG          TTTGCCTTTGCTGTT  60 215
         pgl 4020063 .. 4020101 + -15.3  -3.53224   TAAGTGAACTGCAAT  CTGCGAG-TTTGCCCGGC GCCA GCCGGGCAAGGCGCGCGG   TTTAGAACAGAACTG 100 118
IUJ39_RS19565 4029533 .. 4029545 +  -4.9  -2.94416   GCCCAGAAACAGGGT                GAAAT AAG ATTTC                TGTCTCGTGGACATG  50 141
IUJ39_RS19580 4032255 .. 4032267 +  -3.3  -3.17392   TGCAGTCTTTCATAA                CGGAA TTA TACCG                TTCAGTTAGCCACTG  46 26
IUJ39_RS19585 4032904 .. 4032924 +  -2.4  -4.18018   TCTGGAACGGATCGA            GCCGGCGA CAATT TCACCGTC            TTTTCCATAAAAACC  58 264
        hutI NONE
        hutG 4040237 .. 4040251 +  -2.1  -3.53031   GCTTGGCTGGCAAAT              CGCGCA CTGG TG-GCG               TTAATTTGCCATCCG  47 7
IUJ39_RS19615 4041105 .. 4041122 +  -7.1  -3.08176   CACTTTTCTTGTGCT             TACTTGT ATAG ACAAGTA              TATATCTGGTTCTTA  60 105
        hutU NONE
        hutH 4044449 .. 4044488 +  -7.2  -3.53444   TGCCGGATGGCGCGG  CG-CTTATTCGGCCTGC AAAACCC GCAGGCAGGGTAAGACG  TTTACGCCGCCATCC  65 45
        bioB NONE
        bioF NONE
        bioC NONE
        bioD 4050059 .. 4050078 + -12.2  -3.31726   AAAAATTGCCTTTTT            GCAGGATC AGAC GATCCTGC             TGTTCTCTCGCCAGA  85 49
        uvrB 4053024 .. 4053034 +  -6.8  -3.21276   AACCTTATATTAGCT                 CGCT GAA AGCG                 TGTTATGGCAACAGA  59 342
        slrP 4055562 .. 4055574 +  -7.7  -3.34517   TAGCAGAGGGGAGAA                GGCTT GGG AAGCC                TGTTTGCCAGGGGCT  65 56
        moaA 4057926 .. 4057940 +  -2.8  -2.76492   CTACATTGGCGGTTA               ATCCTT AAT AAGGAG               ATTTCAGATGAGTCA  41 25
        moaB NONE
        moaC NONE
        moaD NONE
        moaE 4059648 .. 4059667 +    -5  -3.85817   GTTGGTAGTAGAATG            TGATACGC TTTA GGGTATCA             TTTCTACACAGGAGT  59 33
IUJ39_RS19700 4060401 .. 4060412 +  -5.8  -3.78775   CCGCTAATGTTGTTG                TGCC GGAT GGCA                 TTTCGTCATCCGGCC  61 34
IUJ39_RS19720 4064355 .. 4064365 +  -2.4  -3.53091   GTGGCGACAATCAGC                 GCAG GCA CCGC                 TTTACCGACGAAAAT  47 417
        rhlE 4071191 .. 4071217 +  -7.3  -2.65354   TTATTCCGCAAAAAT        G-CCCGGTG-GCG CTG CGCTTACCGGGTC        TGCATTTCGCGTGGC  57 44
        dinG 4073505 .. 4073518 +  -9.5  -3.24747   AAAGCAAAACCTGCA               CGCCG CCGA CGGCG                TTAATGCTGTGAGCA  72 8
        ybiB 4074755 .. 4074769 +  -3.5  -4.58685   GTTATAAGCGATTGC              GCCAGC GGCG GC-GGC               TTTTTCGGCCAGTTT  70 260
        rlmF 4077122 .. 4077135 +  -2.3  -4.19953   TGGTGACTAAATCGC               CGGTA TTCA TCCCG                TTTTCAAATTGGATA  58 522
        ompX 4084327 .. 4084344 +  -9.1  -5.81412   GGTGAAAATGAAAAA             TCCGCCT TTCG GGGCGGA              TTTTTTTTGCCTGGA 100 48
        mntR 4086992 .. 4087004 +  -3.4  -2.75708   AGCATGGAGCGCCCG                CAGA ATGAA TCTG                GCTTTTTTACGGGCG  43 18
IUJ39_RS19830 4088114 .. 4088134 + -11.1  -3.21099   GGTGTCGTGAGAGAA            GCCCGACAG TGT CTATCGGGC            TTCGTAGTCCGGGGA  78 31
IUJ39_RS19840 4090901 .. 4090934 +  -9.7  -4.19177   GATCGCGTAATTCAC     T-CGCTACAGGCGC AGTCAAC GCGTCTGTAGCGCA     TTTATCTTACGCCAT  84 31
IUJ39_RS19850 4093282 .. 4093295 +  -8.1  -3.04144   CCCTTCTGATTAACA               GGCCT GCGT AGGCC                TGTTAAGCGTAGCGC  62 32
        gsiA 4101076 .. 4101087 +  -7.2  -3.36492   CCGCTGCAGGATAAT                GCGC TCTC GCGC                 TTATAACATTCAGAC  63 8
        gsiB NONE
        gsiC NONE
        gsiD 4104883 .. 4104898 +  -6.8  -3.36878   TTTCCTGTAAACGCT              CAGCGG AGAT CTGCTG               TTGTAGCTGCATAAA  59 349
        bssR 4106618 .. 4106635 + -12.7  -4.56597   TACAGGTCTGAACAA             GGGGGAG GCGA CTCCCCC              TTTTTACCGGACCGC 100 30
IUJ39_RS19905 4108207 .. 4108224 +  -7.7  -3.29511   ATCCATTTTTCGCCC             TCCGCGCG CCG CGC-CGGA             TTATCAACCCATAGC  62 368
        dacC 4109942 .. 4109971 +  -9.3  -2.64472   TCGTAAAATAACCTC       G-TTGCCGGGAGAG CGT CTCATCCGGCAATC       TGCGTTTAAAACATC  66 35
IUJ39_RS19930 4113024 .. 4113037 +  -3.1  -5.14563   GCATCCGCTAAACGT               TGAAC GGCG GTTCG                TTTTTTAATACGCCA  74 23
IUJ39_RS19945 4115865 .. 4115884 +  -2.1  -3.53761   CAAAGAAAAGCAGTG            GCAATAG GTATGA CTAATGC             TTTAACGAAAAGTTC  47 64
IUJ39_RS19955 4118643 .. 4118655 +  -5.5  -3.58564   AAGGCGGTTGAAAAG                CAGGT TAC GCCTG                TTCCTTTGATAATCT  59 391
IUJ39_RS19965 NONE
        nfsA 4119748 .. 4119768 +  -7.5  -4.14472   CGCTAAAACCTGCGG            GCCAGTGTA TGA TACGCGGGC            TTTTCAGGGTCTTCA  72 35
        rimK 4120689 .. 4120707 +  -2.3  -2.52896   ATTTTGCCTTAAAAT             CGGTGGC TAATC GCAATCG             TGGATTCCGCCGTAG  39 16
IUJ39_RS19980 4121289 .. 4121311 +  -8.4  -3.48617   CCTTCCGATAATCAG           GCAGTCGC TACCAGC GCGGCTGC           TGTTTACGCTTTTTT  71 43
        potF 4122770 .. 4122780 +  -2.4  -3.37344   AAGTGTGCGTTATCG                 GGCG TTC CACC                 GTTTGTTTGTGTGAT  45 63
        potG NONE
        potH NONE
        potI 4125790 .. 4125808 + -11.7  -3.08032   ACTATGGCAATGCGT             TGCCGCG CGGGT CGCGGCA             TCATTTTCAGGGAAG  81 58
IUJ39_RS20005 NONE
        rlmC 4127535 .. 4127573 + -10.6  -3.10901   ATCCATAAATAATAA   TAACCATGATCGAT AAAAAACTCCG ATCGATCATGGTTA   TATATTACCCTGTTT  76 86
IUJ39_RS20065 4135804 .. 4135816 +  -2.7  -3.44792   ACGCGTTTGGTTAGT                TCATT CAG GATGA                TGTCTTTTGCCTTGG  48 229
IUJ39_RS20075 4136520 .. 4136535 +  -3.2   -2.6574   AACGGCGGTGAAAAC              GCGC CGATGAGA GCGC               TACTGTGGCTGGTTG  42 16
IUJ39_RS20080 4137412 .. 4137456 +  -7.8  -2.62616   GCTCAATGCCTTCGT CCAGCGTG-ACGATGGGCTGG TAGC CCAGCTCATCCTGCGCGCGAG TCGTATCGAGCGTAA  56 81
IUJ39_RS20120 4148801 .. 4148812 +  -3.6  -4.07877   GTCGCGAACAACAAT                GGTG CTTT CGCC                 TTCTTTATCCAGTGA  60 508
        macA NONE
        macB 4152568 .. 4152588 + -12.6  -4.21462   AGCCAGAAATAAAAA            TGCCAGCC GATCG GGCTGGCA            TTTTGCCTCCTGGAT 100 121
        clpS NONE
        clpA 4155821 .. 4155838 +  -9.8  -5.60993   TCACTATCGTACAAG             CCGGGC CTTAGC GCCCGG              TTTTTTTATGCCGGA 100 49
IUJ39_RS20175 4159156 .. 4159172 +  -7.9  -4.36914   AACGGACGCAAAAAA              GGCCGGT TAA ACCGACC              TTTTATCCAGCCGCC  79 64
         lrp 4166158 .. 4166187 + -16.5  -2.75577   TGTTAATCCATACAG       CAACGGTGCCGGG TTAA CCCGGTACTGTTG        TCCGTTTTAGCATCG 100 82
        ftsK 4170012 .. 4170023 +  -7.2  -4.18018   TAATCGTGAGGTACT                GGCG CCTC CGCC                 TTTTGAGTAAACCAG  74 4
        lolA 4170784 .. 4170805 +  -2.3  -3.37634   CGTAAGTAGAGGCGA           TGAGTGAGCA ACC TG-TCGCTCG           ATTTTTCGGATAGTA  45 32
        rarA 4172327 .. 4172347 +  -5.4  -4.36716   ATCAATACAATCAGA            TGCGATCG TCAAT TGATCGCG            TTTCCTTTTATTATT  70 222
        serS 4173700 .. 4173713 +  -9.5  -5.61596   CTCCTCTTCTAAAAA               GCGCC TTCG GGCGC                TTTTTTTATGCCAAT 100 51
        dmsA NONE
        dmsB NONE
IUJ39_RS20245 4177880 .. 4177897 + -14.1  -4.95843   GGCTGTGGAATACAA             CCGGGGC GAAA GCCCCGG              TTTTCTATTTTCTGT 100 58
IUJ39_RS20255 4179896 .. 4179921 + -12.7  -3.86254   ATTGTTCTCTGAATT         GTATGCAGGAC GTGA GTCTTGCATAC          TCTTTGTTTACGTTT 100 40
IUJ39_RS20260 4181537 .. 4181559 +  -5.5  -3.95051   GGGAGTCTTTTTAAC           GGCGCTC CTTATATGC GGGCGCC           TTTATAAAATTATTA  63 42
       sopD2 4184583 .. 4184602 +  -9.2  -4.33851   AAAAGCTGTTAAAAA            GGCCCCAC TGAC GTGGAGCC             TTTATTGTACGCTTT  85 41
IUJ39_RS20295 4190850 .. 4190863 +  -2.3  -3.34192   TTAACAGCGAAAATA               CCGGA TTTA TACGG                TTAATTCGGAAGATT  45 37
        serC 4192133 .. 4192155 +  -9.1  -5.15682   TCGTTTCTTTTTTCA           TCCCCACGG TCAGT CTGTGGGGG           TTTTATTTCTGTTTT  93 42
        aroA 4193867 .. 4193891 +  -9.2  -2.90571   AATCATTGTCATCTT          TCGGGCTGGT TCCTC GCCAGCCCGC          TATAATTGCGCAATT  67 422
         cmk 4194731 .. 4194755 +  -7.9  -3.06696   CGAATTTGCAGTACC         CCCGCTG-CA AGGGAA TGACAGCGGG          TATGTTAAACAACCC  62 48
        rpsA 4196581 .. 4196598 + -14.1  -3.20382   GTAATCAAGCACTAA             GGGCGGC TACG GCCGCCC              TTAATCAATCTCACG  95 111
        ihfB 4196967 .. 4196981 +   -10  -5.42514   TGAACCCGAAAAAAA               GCACCT TCA AGGTGC               TTTTTTCATTTATAG 100 57
IUJ39_RS20330 NONE
        msbA 4201189 .. 4201201 +  -6.3  -2.73619   GCGTTTATGCTCAAC                TGCAT AAG ATGCA                ATTTGGCCAATGATT  53 0
        lpxK 4202339 .. 4202357 +    -6  -3.16921   TGGCGATATTCTAGC             CGCCAT ATCACGC ATGGCG             TTGCTGCAAATTGAT  57 176
        ycaR NONE
        kdsB 4204071 .. 4204084 +  -5.3  -4.45077   CTAGTGGCGACTTTC               TCGTA CCGT TACGA                TTTTCCTCATTTTTC  71 122
IUJ39_RS20360 4205508 .. 4205523 +  -6.1  -3.83675   CCGAATACCTTCCGC              CAGCC GCGGCA GGCTG               TTGTTAATTAAATTA  63 455
        cmoM NONE
        mukF NONE
        mukE NONE
        mukB 4213390 .. 4213405 + -11.8  -5.38054   TTATCATCAGGCATG              GGCGGC GAAA GCCGCC               TTTTTCTTTATCCGA 100 176
        ldtD 4215528 .. 4215557 +    -7  -3.14132   CCTAATGTTTAGCTT       CAACGGGGGCGT TTCGCT GCGACCCCGTCG        TTGCTGGGGGAGGGC  59 68
IUJ39_RS20395 NONE
IUJ39_RS20400 4216982 .. 4216998 + -12.3  -5.28176   AGCCGAATGAAAAAA              GCCTGCA AAT TGCAGGC              TTTTTTGTCGGTCAC 100 40
        pepN 4228485 .. 4228513 + -13.2  -5.47218   TAAAAATGTAAGACA       TGCCCGGTAAGCG TTAA CGCT-GCCGGGCA        TTTTTTTGCCTGACG 100 53
        pyrD 4229702 .. 4229731 +  -5.7  -4.84918   ATCAGATTTATCAGA       CAACCAGGGCT TTATTTCC GGCGCTGGTTG        TTTTATATTTCTCCA  76 53
        zapC 4230450 .. 4230463 +  -3.1  -5.00884   AGAATCGTACCATCG               TC-GCC AAT GGCCGA               TTTTTTCAGCGGGCT  74 83
       rlmKL NONE
IUJ39_RS20475 NONE
        pqiA NONE
        pqiB NONE
        pqiC 4239121 .. 4239147 + -12.3  -5.00616   GTAATGTAAATTTAA         CCGCTTCAGGC CGTGC GACTGAAGCGG         TTTTTTAACGCCGGA 100 48
         rmf 4239537 .. 4239553 + -13.7  -3.62591   CTTTAGAAAAAGAAA              CCTCCGC AGT GCGGAGG              TTTCGCCGTTATCGA 100 49
        matP 4242621 .. 4242638 +  -9.8  -5.24129   AATAAACACAAAAAA             CCCCGC GATGAG GCGGGG              TTTTTTATCAGACGG 100 48
IUJ39_RS20525 4245517 .. 4245536 +  -3.5  -3.76641   TGTCCGGGCGTGTTT            CCAGCGA CTGAAC TCGCTGC             TTTAAATCTTCCAGT  56 134
        helD 4250207 .. 4250217 +  -8.2   -3.9693   GGTCCAGCATCCCGC                 CCGC ACA GCGG                 TTATTTCAGTCGCTC  72 50
IUJ39_RS20555 4252031 .. 4252062 +  -5.8  -3.13299   AATAAGCGTTAAAAT      GGCCGGATAAGG CAGTGTAT CGCTATCCGGCC       TGTTAAATATAATCA  54 36
        yccX 4254476 .. 4254507 +  -5.8  -5.06414   TTTGCCGGACCTTTT      GGAAACAGACGATA CAGA TAGCGGCTGTTGCC       TTTTTCTTCGCCGAA  86 86
IUJ39_RS20590 4255989 .. 4256010 + -12.3  -4.85782   CGCCAGATTAAACAA           GGGGTTACC GAAA GGTAGCCCC            TTTGTTTTTAAGGCG 100 36
IUJ39_RS20605 4257600 .. 4257610 +  -3.2  -4.58283   TTATTGATAACGCTT                 GCGT AGA ATGC                 TTTTTAGAAGCGTTA  64 44
        arsC 4259510 .. 4259531 +  -3.1  -2.75528   TTGCAATCAAATAAT           TAAGAATAT AGTT ATATTCTCA            TGATGTGTTACAGAT  43 264
IUJ39_RS20630 4261127 .. 4261139 +  -2.7  -4.25848   GACTGGCGGCGACTT                CTTTT TTT AAGAG                TTTTGGTACGCCCTT  58 92
IUJ39_RS20640 4263400 .. 4263433 + -11.7  -2.53715   TCTTATCACCTCGTT     AGCGTCAGAGGAGGA ATTT TCCCCCTCTGATGCC      CTTCGTCATCATGCA  79 270
IUJ39_RS20655 4267313 .. 4267361 + -19.1  -3.51365   TTCCCTCATATTTCC ACCAAAGATAACCCCCAACGAAT GTT ATTCTCTGGGGGTTATCTTTGGG TTATATAGACTCTGG 100 143
IUJ39_RS20670 4270408 .. 4270424 +    -3  -4.09511   ATGTTGCTGCTTAGC              CGTTTG CTGTT CAAATG              TTTTCCAGGCGTGTT  58 449
        hiuH 4274504 .. 4274548 + -10.8  -2.70932   TCTTCAGAGTATCGA GCACT-ATCCCCCAGGCGGTGG TTA TC-CCGCCTGGGGCATGAGTGG TGATTAAACCGGCGC  74 100
        hpaG NONE
        hpaE 4280307 .. 4280324 +  -2.7  -2.85351   CAATGGGCGGCCATC             CTATCCCA AAA TGGGG-AG             TCTGATATGGGCAAG  42 3
        hpaD NONE
IUJ39_RS20730 NONE
        hpaH NONE
        hpaI NONE
        hpaX NONE
        hpaA NONE
IUJ39_RS20755 4286632 .. 4286660 + -16.1  -3.08032   AGGGTAGGGGTAAAT        CAACGGGCTGGCA TTA TGTTAGCCCGTTG        TGCTTTTGGCGCCCA 100 46
IUJ39_RS20775 NONE
IUJ39_RS20780 NONE
IUJ39_RS20785 NONE
IUJ39_RS20790 4292967 .. 4292981 +  -2.8   -4.0492   TTGCGAAATCGTTCC               CGGA AAAATGA TCCG               TTTCTGTCACACTTG  56 95
         agp 4294276 .. 4294297 + -15.1  -3.81741   CGCAAAATAGCAACC           TGCCCCCGC GCAG GCGGGGGCG            TTTGCCTTATACGTT 100 31
IUJ39_RS20810 4295761 .. 4295778 + -14.1  -5.04601   CGTCATGCGCCACCG             CCGCCGG ATTT CCGGCGG              TTTTTGGTTTATAAG 100 85
        rutR 4296949 .. 4296971 +  -9.8  -3.59979   TTGTCATCAGGCTGG           CATTACCGCC AGC GGCGGCAGTG           TTTACACTCAGCGAA  77 499
        putP 4302823 .. 4302851 +  -8.2  -3.63744   GCGGAATAGCCGACA       TGCCCGATAACGT TATT GCGTT-TCGGGCG        TATTTTACCAGGCGG  69 32
        phoH 4308524 .. 4308547 +   -11  -3.59966   TATAACGTTGACTTT          CAGAGCCTGG GAGA CCGGGCTTTG           TTGTCTATAGAATGT  83 41
IUJ39_RS20865 NONE
IUJ39_RS20870 4314766 .. 4314790 +  -2.2  -3.71517   TAATCCTATAACCCG         TGGCT-ACGTT ACAG AACGTTAGACA          TTGTGTTGAGTATTC  51 90
IUJ39_RS20875 NONE
IUJ39_RS20880 4317619 .. 4317631 +  -9.1  -3.28791   TCGTCGTCTGTCCAA                CTGGC TGC GCCAG                TTGTCGAACCCCGGT  69 263
        ghrA 4318996 .. 4319011 + -11.8  -3.64703   GGGTATTGACATCAA              CCCGGC GCGG GCCGGG               TTTCACTAAAAAAGG  89 32
IUJ39_RS20900 NONE
IUJ39_RS20905 4320391 .. 4320404 +  -5.3  -2.82803   AAGATGAAGAATAAT               GTGAT TTTA ATCAC                CTTTAACTGTAACTC  49 27
IUJ39_RS20910 4320977 .. 4320997 +  -9.6  -4.89233   TCACAAAATAAAAAA            GCGAGGGG TTCTT CCCCACGC            TTTTTCGTATTCATC  93 30
        csgB 4324503 .. 4324522 +  -2.1  -2.53392   AGTCGCATATGGCTA            TTCGCGT AACTCA ACGCTAA             TACCTTGACGACTTT  39 6
        csgA 4325020 .. 4325035 + -10.4  -5.40072   CTGCGCTAATAAAAA              CAGGGC GTAA GCCCTG               TTTTTTTCGGGAGGA 100 49
IUJ39_RS20950 NONE
        ymdB NONE
IUJ39_RS20960 4327920 .. 4327930 +  -6.8  -4.51196   CGGAAAACTATCCGA                 TCGC GGC GCGA                 TTTTCTCGCTTTACA  77 50
        mdoG NONE
        mdoH 4333463 .. 4333481 + -10.3  -4.83169   GAGTAATGTGAAAAA             TACCGGC CTGGC GCCGGTA             TTTTTATACAGAAAT  91 79
IUJ39_RS20980 4333838 .. 4333856 +  -5.3  -4.15632   TGTAATGTATTCTCT            TCCTGCCA TTCC TGGC-GGA             TTTCTATCTCATCAT  67 129
IUJ39_RS21000 4337753 .. 4337786 +   -19  -3.53343   GACAGAGTGAGGTTT     TGCCGGATAGCGGC GTAAAG GTCGCTATCCGGCA      TTTCGCCAGGGGGTT 100 31
        rimJ NONE
IUJ39_RS21060 4346692 .. 4346705 +  -2.3  -2.62515   TGGATTCTTTGTTAG               CTCAC CTGG GAGAG                TAATGTGAGAACATT  39 9
IUJ39_RS21065 4347881 .. 4347935 +  -3.4  -3.34962   GTAGGCCTGACAAGA CGTTCTGACGTCGCCGTCAGGC GCGGTGATACA GCCGGATGGCGGCGTAAATGCG TTATCCGGTCTGGGG  48 273
        murJ 4349772 .. 4349784 +  -9.1  -5.11613   TGCTGGTTGAGGTCG                CGCAG ATG CTGCG                TTTTTTCGGTGATCT  95 265
        flgB NONE
        flgC 4352073 .. 4352084 +  -2.2  -3.06671   TAGGCCAGTAAAGGA                GACG CGTA TGTC                 TATTGCCGTAAATAT  42 30
        flgD NONE
        flgE NONE
IUJ39_RS21110 NONE
        flgG 4355588 .. 4355621 +  -9.4  -3.09004   GACGCAACTCTAAGG     GGCTGCCGGTGGGG TGAAGT CGCCACCGGCTCCC      TGATTTTGAAGATGA  71 28
        flgH NONE
IUJ39_RS21125 NONE
        flgJ NONE
        flgK NONE
        flgL 4361137 .. 4361165 + -14.6  -5.55664   TGGATATGTTTTGTC        TGCCCGCGCC ATCCACCCC GGCGCGGGCA        TTTTTTTAGTCGTCG 100 69
        rluC 4366077 .. 4366126 +   -11  -3.32343   GTAATCCTGCCTGAC GTGTTTGTAGACCGGAT-GGCG CTGTTTGC CGCTTATCCGGTCTAC-AACGC TTATCCGGCTATGCG  80 27
        yceD NONE
        rpmF 4367693 .. 4367704 +  -5.8  -2.62983   ATGCCTTTTGCATCA                CAGG CGCG CCTG                 TAGTGTAAAAGTCGA  50 55
        plsX NONE
        fabH 4369886 .. 4369896 +  -2.4  -2.98982   GGGTGGATTCACCTG                 GGGC TCC GCGC                 TGATTCGTTTTTAGT  42 1
        fabD NONE
        fabG 4371720 .. 4371733 +  -2.3  -4.25848   TACACTACGAAAACC               ATCGC GAAA GCGAG                TTTTGATAGGAAATT  57 143
        acpP 4372001 .. 4372027 + -13.1  -5.02287   GGCGTAAGTGAACAT        CTCCAGGCGGTC ATTC GACCGCCTG-AG         TTTTATCTTTTTGTC 100 34
        fabF 4373336 .. 4373376 + -17.1  -5.45652   ACCGGCACGTGCATG  AAAATAAAAAACCTCCGGC TAT GCCGGAGGTTTTTTATTCC  TTTTTTCTTCGAAAT 100 42
        pabC NONE
        yceG NONE
         tmk NONE
        holB NONE
IUJ39_RS21250 4384356 .. 4384372 +  -7.9  -3.30124   AAGGGCACTTAGATG              CCCTGTC CAC GGCGGGG              TTCTCCCCCCTCGCC  65 238
        ptsG 4385897 .. 4385913 + -13.7  -5.52986   GTTGGGGAGAACTAA              GGCAGCC TTC GGCTGCC              TTTTTTTAATGACGT 100 52
        hinT NONE
IUJ39_RS21270 NONE
        lpoB NONE
        thiK NONE
        nagZ NONE
        ycfP 4392289 .. 4392304 + -10.4  -5.67063   TCAATTACGGGATAA              CCAGCC TTGC GGCTGG               TTTTTTTATGCTCAA 100 57
         ndh 4393818 .. 4393847 + -11.5  -4.33803   GCATTAATTTCTCTG       CGACTCACCGGC TGTTAGC GCCGGTGAG-CG       TTTCTTCGTATCTTT  93 34
IUJ39_RS21300 4394550 .. 4394574 +  -7.8  -5.93809   TACTCTGCAAGTTAG          CCCCTCATTC GCTCA GGCTGAGGGG          TTTTTTTTATCCGAC 100 49
        bhsA 4395775 .. 4395796 + -10.1  -5.28176   TTGCCACAATAAAAA           GCCTCACGA TTGA TCGCGAGGC            TTTTTTGTCGGTCGG 100 69
        lolC NONE
        lolD NONE
        lolE NONE
        nagK NONE
        cobB 4405786 .. 4405805 +  -3.4  -4.11394   ACTCTTCATAAATTG            CGCTGGCG TCGC CGACATCG             TTTTGCCACTCGCCT  58 151
        pepT 4413003 .. 4413022 +  -2.8  -4.09864   CGAGGAAGGACGGAT            CTTCCAGCG CAT CGCCG-AAG            TTTTCGGCGGTCAGT  58 196
         icd 4422931 .. 4422942 +  -5.8  -5.20633   ATTTACAGACAAGCC                CGCT ACTA AGCG                 TTTTTATGTGTTTTT  83 408
IUJ39_RS21440 4425782 .. 4425811 +  -6.5  -3.70902   CAAATAAGTATTTTA       CCGACTATAAC ATGTTTTG GTAATAGTCGG        TTTGAATCTAAAAAA  62 234
IUJ39_RS21465 4436706 .. 4436723 +  -8.4  -5.02476   TTATATCGTCACAGA             CAGCGC CTTAGC GCGCTG              TTTTTTCCCGGATAT  91 55
IUJ39_RS21490 NONE
IUJ39_RS21495 4440502 .. 4440522 +  -3.3  -3.16191   AACTAACAAGAGGTA            TCCATAAAA ATT TTCTGTGGA            TTAATCACAATGTCA  46 228
IUJ39_RS21500 4441180 .. 4441212 +  -9.8  -3.10894   GGCCTGAAGATTTAA     CCGCGCCAGAG-CGT ATGC AAGACCCTGGCGCGG      TTGGCTGGTGATCGT  71 473
IUJ39_RS21515 4443410 .. 4443435 + -14.8  -3.12351   TCATAATCACGTTAA         TGAAGGCCCG ATTAGA CGGGCCTTCA          TTGCCTGTGGCGAAA  89 35
IUJ39_RS21520 4444840 .. 4444850 +  -2.4  -2.94218   AATAATAATGTCTTG                 CCAG GTG CGGG                 TCTATCATGCGAGAT  41 82
IUJ39_RS21535 NONE
IUJ39_RS21540 4449170 .. 4449185 +  -5.4  -2.78384   CTCAATCGATCGCTG              GAGCGT CCCG ATGCTC               TATAATCCCGCCCAG  50 5
IUJ39_RS21545 NONE
IUJ39_RS21550 NONE
IUJ39_RS21555 4451410 .. 4451431 + -11.5  -3.22475   GTCGCAGTTAACGCG           CCGGGAACC GGCC GGCTCCCGG            TATTGTCGGCATAGC  81 68
IUJ39_RS21565 NONE
IUJ39_RS21570 4453215 .. 4453225 +  -8.2  -3.69341   AAAGGCCACCTGCGC                 GCGG TGG CCGC                 TTAGTTTCTGTTGAA  69 53
        zinT 4453968 .. 4453987 +  -9.3  -5.34555   AATCGTTGTATTAAA            GCTCGCT ATTCAC AGCGAGC             TTTTTTCTGCTGTGA 100 45
IUJ39_RS21585 4454993 .. 4455006 +  -2.5  -3.05266   ATGTAAATAGTGAGG               TTATT GCTT AATAA                TGATTTGCTTCTGAT  43 15
IUJ39_RS21590 4455945 .. 4455962 +  -8.3  -4.68511   ATTATTAACGAAAAA             GGGAGGG TTAA CCCCCCC              TTTGTTTATATTAGA  89 50
IUJ39_RS21600 4457066 .. 4457078 +  -2.6  -3.14132   CTGCGTTGTCTCTGG                TGCG ACGAG CGCG                TTAATGCCACAAGAA  45 9
IUJ39_RS21605 NONE
        leuE 4458706 .. 4458722 +  -2.3  -5.03314   ATAGTAACCAATAAA              TGGTATT TAA AATACTG              TTTTTTGGGCGTAAC  71 110
        yeaR NONE
IUJ39_RS21620 4459389 .. 4459417 +  -6.7  -4.93365   TTTTTAAAACAGATA        CCGCATCGCAC GTGGCCA GTGTAATGCGG        TTTTTGCTTATCGGG  82 73
IUJ39_RS21625 4460355 .. 4460375 +  -5.5  -3.18264   TCAATCGCTTGGTAT            TGATAAAGA TAA TCGTTATCA            TTAATGAATGCAACC  54 169
IUJ39_RS21630 4460790 .. 4460814 +  -9.4   -3.6849   AATCTTCAGATATAA          TAAAGGCTGC GACAG GTAGCCTTTA          TTATTCAAATTGGAT  77 47
IUJ39_RS21640 4461477 .. 4461490 +  -5.3  -3.45776   GGTCCGACGGAATAT               GATTG AGAA CAATC                TTATAATCAGTTTCA  56 49
IUJ39_RS21645 4462332 .. 4462345 +  -9.5  -2.92951   ATAAGCGAAGCCGGG               GGGCC ATCA GGCCC                GTTTATGAGGCTATC  70 524
IUJ39_RS21660 4464499 .. 4464529 +  -9.7  -2.75844   CGCCCAGTACCGTAC      CGACCAGCAGCCCG GCGA CGAGCTGC-GGTTG       ATTTCCCATCAGCGC  69 118
IUJ39_RS21670 4465217 .. 4465232 +  -6.8  -3.17051   TCCGGCCGGGCGATT              CGCAGG TAGT CCTGTG               TATTCATAATGACCG  57 80
IUJ39_RS21695 4472407 .. 4472423 + -12.3  -3.96327   GGAAAACTGCTACAA              GCCTGCA TTA TGCAGGC              TTTGTACTGACGGAT 100 52
IUJ39_RS21705 4474538 .. 4474552 +  -2.8  -4.84311   ACGCAGATAGTTTGC               GCCA GACGAGA TGGC               TTTTCTTCTGTGGCG  71 171
        msrB NONE
IUJ39_RS21725 4477980 .. 4478004 +  -7.9   -4.1552   CCGGCCCCGGAAATC          TACGCAATGGT CTC ATCGTTGCGTG          TTTATTGGCCGGATA  76 219
        sppA 4479767 .. 4479799 - -14.3  -2.55896   CGTATTAATGAATAT     CGGATGGCGGC-TA TCACTG TACGCCGCCATCCG      GCATGGCTATTGAGG  87 46
        ansA NONE
        pncA 4477629 .. 4477656 -  -3.3  -4.15514   AACAGAAAGAAAACA        GCCTGCAACTG GTGATG CTATGGCAGGC         GCGGCACAATACCGA  60 403
        gapA 4475673 .. 4475690 - -11.3  -5.81412   TTTAGGCAAAAAAAA             GAGCGAC CAGA GTCGCTC              TTACCAATGACTGTT 100 51
IUJ39_RS21710 4474434 .. 4474464 - -11.1  -2.75229   TAAAATGCGTAAGCA       TCGCCATCCGGCA AGCAA TGCCTGATGGCGG       CTGGCACCTTATCGG  74 71
        yeaG NONE
IUJ39_RS21685 4467839 .. 4467864 -  -8.3  -3.91897   CTTGGTAGTTATAAA         TCAGCCCGTTA TATA TTACAGGCTGA          TTTATGGTTATGCGC  76 33
IUJ39_RS21680 NONE
IUJ39_RS21675 4464932 .. 4464961 -  -7.1  -2.56164   TTTTTAACGATTAAT       GCGGTTTTCAGGC AAAC GCCTGAAAGACAC        TCTCGACGCGAAAAA  57 223
IUJ39_RS21655 4462222 .. 4462233 -  -5.8  -2.78672   GTTAAATATATACCA                CGCT GACT AGCG                 TTTAAGGGGCTCATT  50 140
IUJ39_RS21650 4461571 .. 4461583 -  -6.9  -4.08216   TTATTGGCGCTAAAA                CGCCC GCC GGACG                GCGGAATATTGGTAA  70 261
IUJ39_RS21635 4460787 .. 4460817 -  -9.9  -2.90219   CAGAATCTTCAGATA       TAATAAAGGCTGC GACAG GTAGCCTTTATTA       TTCAAATTGGATTTA  70 115
IUJ39_RS21595 4455945 .. 4455962 - -10.5  -4.90869   ATTATTAACGAAAAA             GGGAGGG TTAA CCCCCCC              TTTGTTTATATTAGA  93 36
IUJ39_RS21560 4451406 .. 4451423 -  -9.1  -3.05596   CATGGTCGCAGTTAA             CGCGCCGG GAA CCGGC-CG             GCTCCCGGTATTGTC  68 51
IUJ39_RS21530 4445525 .. 4445542 -  -9.8  -4.97402   TAAAATGGATAAAAA             GCCGGC TGTATC GCCGGC              TTCACGTTGTTATTG  93 35
IUJ39_RS21525 4444784 .. 4444811 -  -5.5  -3.52317   TTACAAACTAAGTAA        GGCGCTATAAG GCGAAA CCGACAGCGCC         TGGCAAAATTTGGAA  57 90
IUJ39_RS21505 4441180 .. 4441212 - -13.4   -3.1855   GGCCTGAAGATTTAA      CCGCGCCAGAGCGT ATGCA AGACCCTGGCGCGG      TTGGCTGGTGATCGT  91 275
        pagD 4438505 .. 4438515 -  -2.4  -3.27129   CAAGACAAACACATA                 CCTC AAA GGGG                 ATAACGAGGCGCACT  44 138
        cspF 4437854 .. 4437864 -    -4  -4.04474   ATAGTCTTACATAAA                 TAAC TCG GTTA                 AACGCACGCAGCCAG  59 446
IUJ39_RS21475 4437149 .. 4437184 -  -7.5  -3.71645   AACGTGAGAGTGAAA    GCCGCCAACCCGTTG CTGTGT CATGAGGTTAGCGGC     ATGAGTCTCACAGTG  68 58
IUJ39_RS21470 4436535 .. 4436553 -  -7.4  -4.09685   TTTTACCGGTGAAAA             GGACAGCA GAA TGCTGTAC             AACGTGGGCCTGAAT  74 239
IUJ39_RS21460 4431134 .. 4431165 - -11.6  -3.21595   AATGGGCATGAGCAA      CCTGGAACGGGTGA GGCG TCACACGTCCCAAG       GACAGTGACCTGCGG  81 287
IUJ39_RS21455 4430313 .. 4430328 -  -8.2  -3.34398   GTTTTTTCTTAAATA              GCCCGC CTGC ACGGGC               CGCAATGTTAGTTTG  65 33
IUJ39_RS21450 4428858 .. 4428883 -  -4.6  -3.23598   TAATCAATCGATTAA         TTTGTCGGGC TTAGTG GCCCGACGGA          AGTGTTTAGAATGTA  50 31
IUJ39_RS21445 4426087 .. 4426126 -   -13  -3.43217   TTTAAACTCAATGAA  TTGTAAAGAACGGGAGCC GATA GATTCCCGTTCTTTACGA   CTTATGAAAAGCGTT 100 94
IUJ39_RS21430 4422574 .. 4422592 -  -7.3  -3.46509   TGTTAATAACATTAA             CGGGGGC TTAAC GTCCCCG             GTTTTATTATTAGCT  65 407
        rluE NONE
IUJ39_RS21415 NONE
IUJ39_RS21410 NONE
        mnmA 4418505 .. 4418521 -  -2.1  -2.94872   TGCATTGAATAATCA              GACCGTC AGC GGCAGCC              GCTGCTCAATAATAC  41 6
        hflD NONE
        purB 4416363 .. 4416392 -    -8  -3.67724   TAAACCAGACAAATA       GTCACCCTCTTTC TGAAG AAAAGAGGGTG-C       GGCCCGCATTATTTA  69 34
        phoP NONE
        phoQ 4414089 .. 4414101 -  -3.3  -2.94099   GGCTGGTATCAGATA                CCGAT TAT AACGG                ATGCTTAACGAGATG  44 64
IUJ39_RS21380 4412900 .. 4412916 -  -5.7  -3.30124   TCGTAGGCCTGATAA              GACGCGG TAG CGGCGCC              ATCAGGCACAACATC  56 47
        potA NONE
        potB 4409189 .. 4409200 -  -2.2  -4.13648   AAGTTCATATATAAA                CGCA TCAC TGCA                 TATGATAGTTCCGAT  55 197
        sifA 4407712 .. 4407725 -  -8.1  -4.55689   AGCAGCCAGAGAAAA               CAGGC TGCC GCCTG                AAGTCACGAATTTTA  82 332
        potC 4406807 .. 4406823 -    -5  -2.71011   ACGTCCCCTGAATTA              CGGGCC TTATC GGCCCT              TGGTTTTATCACGAG  49 15
        potD 4405530 .. 4405542 -  -5.5  -3.26844   TGCATGAAGCAAAAC                TGCAC GGC GCGCA                TACGGTGGAACTGAA  52 225
         mfd 4396910 .. 4396922 -  -4.9   -3.6715   GCAGGGAAGTGCAAA                TCTTT TGT AAAGA                TTAGGCCGGGCGCAG  57 64
IUJ39_RS21315 4395775 .. 4395796 - -12.3  -5.18726   TTGCCACAATAAAAA           GCCTCACGA TTGA TCGCGAGGC            TTTTTTGTCGGTCGG 100 82
        comR 4394341 .. 4394358 -  -4.1  -3.22884   GGAGCAATGCAGGAA             GGTGATA CTTA CACCACC              ACGCAGCAGCGCTGT  47 267
        fhuE 4385897 .. 4385913 - -13.7  -3.44146   GTTGGGGAGAACTAA              GGCAGCC TTC GGCTGCC              TTTTTTTAATGACGT 100 67
IUJ39_RS21225 4378806 .. 4378822 - -12.3   -4.1552   CATCTCTGGAATAAA              GCTGGAG CTA CTCCAGC              TTTATAAGTAGTAAC 100 173
IUJ39_RS21220 4378103 .. 4378113 -  -3.2  -3.60006   AATCAGAGGGCTAAA                 CCGT ATT ACAG                 GTGGCTGGAGTGTTT  51 20
IUJ39_RS21215 4375459 .. 4375477 -  -3.2  -3.41878   GCGTGCAAGCGATAA             TTGATG TTTTATT CATCAA             GCATCATCCTTAATA  48 55
IUJ39_RS21210 NONE
IUJ39_RS21205 NONE
IUJ39_RS21200 4373347 .. 4373365 -   -16  -5.83211   CATGAAAATAAAAAA             CCTCCGGC TAT GCCGGAGG             TTTTTTATTCCTTTT 100 54
IUJ39_RS21155 4365981 .. 4366002 -  -4.3  -2.71712   CCGCCGCGCTGAAAT           TCACCCACC CGGG GACGGGGGA            CGTGTTGCGCATTGA  46 158
         rne 4361303 .. 4361320 - -12.7    -5.626   GAGGGGATAAAAAAA             GCCGACC TGGC GGTCGGC              TTTTTATCAGCGGTT 100 44
        flgA NONE
        flgM NONE
        flgN 4349589 .. 4349602 -  -9.5  -3.55761   CATTCAGGCCGGAAA               GGCGG AGCG CCGCC                ATCCGGCAATCCTTA  75 38
        grxB 4343252 .. 4343274 - -10.6   -4.7657   GAAAAAGCTGAAAAA           GGCGGCAA GAGAGGG TTGCCGCC           AGGCGGGCGTTAGAT  95 35
IUJ39_RS21040 4342577 .. 4342590 -  -9.5  -5.08824   TTTGCACGTAAAAAA               GGCGC GAGT GCGCC                CTCAAATATTAATTG  93 34
        pyrC NONE
        dinI 4341090 .. 4341105 - -11.8  -5.63517   TGCGCAAATAAAAAA              GCCGGG GCGA CCCGGC               AAAACTTACATCACT 100 53
        bssS 4340548 .. 4340569 -  -8.7  -4.59089   CAAGCCAGAAATAAA           TGAGGCACC TTAC GGTGCCTGA            GAGAGGGGAGCGCGT  87 45
        solA 4339336 .. 4339352 -  -7.2  -2.61274   CTTACCTTAATCAAT              GACCCC TTTAC GGGGCC              GACAAATTATTGGCT  57 32
IUJ39_RS21010 NONE
IUJ39_RS21005 4337319 .. 4337331 -  -3.3  -3.85817   ATTCGTTGTGAGAAA                GCCAG CGC CTGGA                TGAAACACAACGGTT  55 494
IUJ39_RS20995 4335528 .. 4335547 -  -7.8  -2.96611   AAAAAAGGGGAGAGA            GTGCAGCC TGAC GGCTGCAA             TCCTGTCAATAGCGC  61 31
        mdtG 4334153 .. 4334163 -  -2.4  -3.57185   TTTAGGGAAAGAATA                 GCTG ATT CTGC                 GATATTGCAAGTATG  49 53
IUJ39_RS20985 4333463 .. 4333481 - -10.3  -4.67904   GAGTAATGTGAAAAA             TACCGGC CTGGC GCCGGTA             TTTTTATACAGAAAT  91 279
        mdoC 4327821 .. 4327851 - -11.8  -4.41616   AGGGTGTTAAAGAAA       GAACCCGCTACACG TTT CTGGCAGCGGGTTC       TGGTACGGTTGGCGG  95 86
        csgE 4321975 .. 4321990 -    -4  -3.21034   TATCGATAGTAAAAT              CGT-TGG TCA CCATACG              TCCTGGTTTTCCGGT  48 330
IUJ39_RS20890 4317695 .. 4317714 -   -10   -4.9755   ACATATAAGCAAAAA            GCCCGTAC TTTC GTACGAGC             TCTTTCTTGAATATG  93 39
IUJ39_RS20885 4317513 .. 4317532 -  -2.8  -5.81032   TAATGCGAAAAAAAA            GCCCGT GCTTTCAT ACGAGC             TCTTCTTTGAAGATG  93 39
IUJ39_RS20860 4311392 .. 4311412 -  -2.6  -3.53563   ATAGTTTCTGTTAAA           CCCAATGAC GCTC ATCAT-GGG            ATGTAAAAGGCGCAG  48 229
IUJ39_RS20855 4309532 .. 4309557 -  -3.3  -4.63527   TGATTACGGCAAAAA         GC-CTGCAATAT CGA ACAGTGCAGAGC         CTATCAAGTCTGCGG  66 251
IUJ39_RS20850 4308586 .. 4308597 -  -5.8  -4.82901   GTCTGGGGACAAAAA                GCGT AATG ACGC                 CGGTACGAGAATGGA  76 42
IUJ39_RS20840 4304653 .. 4304663 -    -4  -3.18681   TGTTAATGGCATCAA                 TATC GTT GATA                 TATCGATGCCAGTGA  48 110
IUJ39_RS20835 4302766 .. 4302793 -  -8.5  -4.07885   GAGCGCTTTGCAAAA       GCGGACGC-GCAT TATC ATGCAGCG-CCGC        CGTCGAAGCTACAGG  78 101
        putA 4296892 .. 4296909 -  -9.1   -4.7373   TGACGCGAGTAAAAA             GGCTCCA TTGA CGGAGCC              TTAATTAACCACAGT  90 42
IUJ39_RS20820 4296260 .. 4296277 -  -3.4  -4.84527   TTGATAGATGAAAAA             TCCGCGC TGATT GC-CGGA             TGGGTGCACAGCGGG  71 220
        wrbA NONE
IUJ39_RS20800 4294270 .. 4294302 - -15.6  -3.65542   TGCAGCCGCAAAATA     GCAACCTGCCCCCGC GCAG GCGGGGGC-GTTTGC      CTTATACGTTCTTAC 100 27
        cbpA NONE
        cbpM 4287977 .. 4288004 - -14.2  -3.01726   CGGGCGCATATAAAT        CCGA-GGCGGGCT GAT AGCCCACCTTCGG        TTTATTACTTTTATT  89 47
        iraM 4286632 .. 4286660 - -11.7  -2.74263   AGGGTAGGGGTAAAT        CAACGGGCTGGCA TTA TGTTAGCCCGTTG        TGCTTTTGGCGCCCA  79 385
        hpaR 4276818 .. 4276833 -  -5.4  -3.36492   CCGTCAACGTTATAA              GCGGGAG GGG CTCCC-C              ACGTCGGCGGCGTGG  56 54
        hpaB NONE
IUJ39_RS20700 4274250 .. 4274262 -  -4.7  -4.56597   CTGTGGCCCGAAAAA                CCTGC CGC GCCGG                GCGATTACCGCGTTG  70 315
        hprR NONE
IUJ39_RS20685 4271802 .. 4271812 -  -2.4   -3.8211   TTGTATTGATAACAA                 CAGC CCT GCAG                 CAGGAAAGGGAAAAT  51 64
IUJ39_RS20680 4270202 .. 4270223 -  -2.4  -3.57144   TGGGTTATCGTTAAA           TTTCATGGT TGCGT ACC-TGAAA           AGTGATATTTCATAT  49 6
IUJ39_RS20675 4269777 .. 4269789 -  -6.3  -3.53444   TTACTCCTGCGTAAA                GTAAC GCT GTTAC                ATCAAATGTTATACA  60 229
IUJ39_RS20665 NONE
IUJ39_RS20660 4267319 .. 4267355 - -17.5  -3.74251   CATATTTCCACCAAA    GATAACCCCCAACGAAT GTT ATTCTCTGGGGGTTATC    TTTGGGTTATATAGA 100 113
IUJ39_RS20650 4263721 .. 4263731 -  -5.4  -3.64703   TCTTTTCCATTGAAA                 CTCA CTG TGAG                 CAGTAACCATCTAAG  59 259
IUJ39_RS20635 4260884 .. 4260910 -  -5.1  -3.65001   GATATGATAGAAAGA         GCAGGCTGGAT TCTAT ATCCAGGCTTC         TTTTCTCTCTATGGT  58 316
        pipB 4259513 .. 4259528 -  -4.8  -3.65446   CAATCAAATAATTAA              GAATAT AGTT ATATTC               TCATGATGTGTTACA  57 61
        yccA 4254791 .. 4254808 - -10.5   -5.0917   GTAGCAAAAAATAAA             GCCCCGC ATAA GCAGGGC              TGGAAGAGGGGAATT  93 45
        tusE 4254323 .. 4254339 -  -7.9  -3.59627   ATCAAATGGCTGAAA              GAGGGCG GGC CGCGCTC              TGCTCGTGTGGACAA  66 98
        rlmI 4252414 .. 4252432 -  -3.9  -3.24232   CTCCCGGGAAATAGA             TACCCTT TATAT AAGGATA             CTATTCCACTTTTCA  48 43
        hspQ 4252030 .. 4252063 -  -4.5  -4.17523   AAATAAGCGTTAAAA     TGGCCGGATAAGG CAGTGTAT CGCTATCCGGCCT      GTTAAATATAATCAG  64 37
IUJ39_RS20550 4250749 .. 4250762 -  -3.8  -5.90231   AGAAAGACAAAAAAA               GTGC GCGCTG GCAC                AACTCGTATCAAGAG 100 34
        mgsA 4250185 .. 4250211 - -10.1  -4.29656   GAGAAAACCCTAAAA         CGCGGGCGG TCCAGCATC CCGCCCGCA         CAGCGGTTATTTCAG  85 32
IUJ39_RS20535 NONE
        yccS 4245334 .. 4245368 -  -8.5  -3.25823   GTTGGCGTACATGAA    GCGGCGCTCCCGGCGA GCCG TCGCCAGGAGCTT-GC     GGACTGGGCTCATTC  63 43
        sulA 4243967 .. 4243977 -  -8.2  -2.68202   TGTACAGCAAAAATC                 GCGG AAA CCGC                 TTCTGGCAAGCTTTC  59 116
        ompA 4242614 .. 4242645 - -13.9   -3.7642   TGTAATGAATAAACA      CAAAAAACCCCGC GATGAG GCGGGGTTTTTTA       TCAGACGGAAACTTA 100 38
IUJ39_RS20505 4240195 .. 4240209 -  -5.7  -2.77895   TGTACGCTGAACAAG               TCCGA TCAGT TCGGA               ATAAAATAGTTCAGC  50 16
        fabA 4239533 .. 4239557 - -18.7  -4.82901   GTCTCTTTAGAAAAA          GAAACCTCCGC AGT GCGGAGGTTTC          GCCGTTATCGATTTT 100 81
IUJ39_RS20465 4230338 .. 4230377 - -10.1  -2.84344   TAAAATTATGAACGA  CAGGCTGAAACCGCAGGC TTACT GCC-ACAGTTTTAGCCTG  GAACAGGCGGTTTAA  72 37
IUJ39_RS20440 4224482 .. 4224506 -  -2.1  -3.63805   AGTGGATACGTCAAA          TCCTGACTG GCCTGAA CAGCCAGTA          GTCGTTACTGTGGTA  49 204
        pncB 4222251 .. 4222268 -  -8.4   -4.7339   AATAAACCTGAAAAA             GGAGCC CTGGCT GGCTCC              CTGGGTAGAGTTAAC  89 36
        asnS 4220644 .. 4220669 - -16.3  -2.60508   CAGCCCCGAAAAAGG         GCCAGTCAGTT GTTT AACTGACTGGC          ATTACAGCATAGCTG 100 66
        ompF 4218357 .. 4218372 -    -9  -5.77988   AGAGACATAAAAAAA              CAGGAC CGAA GTCCTG               TTTTTGGGCATAAAA 100 57
        aspC 4216982 .. 4216998 - -12.3  -5.27477   AGCCGAATGAAAAAA              GCCTGCA AAT TGCAGGC              TTTTTTGTCGGTCAC 100 57
        elyC 4204898 .. 4204909 -  -2.2  -3.35679   TCGCCTGATGGATAA                TCCA TTGG CGGA                 GGGATTGCTTTGGCA  45 174
        ycaO 4188177 .. 4188197 - -10.3  -5.26247   CGAAAATAAATAAAA            CGGGGCCCC AAA GGCGCCCCA            TAATATAACGCAGCC 100 77
        focA 4186932 .. 4186949 -    -2   -3.1247   AGCTCGGACATGTAA             CACCTA CCTTCT TAAGTG              GATTTTTTATTTACT  42 64
        pflB 4184583 .. 4184602 - -11.4  -4.61527   AAAAGCTGTTAAAAA            GGCCCCAC TGAC GTGGAGCC             TTTATTGTACGCTTT 100 68
        pflA 4182199 .. 4182219 -  -7.6  -5.19275   ATCCAGAAAACAAAA           CGGCTACCA TTAT TGG-AGCCG            TTCAAAAGCGGATAA  91 53
        trxB 4164044 .. 4164060 - -12.3  -4.89063   CGACGCAAAAATAAA              GGCGACT TAT AGTCGCC              TTTTTTTACTTTTGT 100 57
        cydD NONE
        cydC NONE
         aat 4159500 .. 4159527 -    -5  -4.07618   CTTTTAATAAGTAAA        GATTTG-TGCGTT TAA AACACAGCAAACC        AGATTTAGCGCATGA  63 237
        infA 4159156 .. 4159172 - -10.1  -5.10497   AACGGACGCAAAAAA              GGCCGGT TAA ACCGACC              TTTTATCCAGCCGCC  93 63
IUJ39_RS20170 NONE
IUJ39_RS20165 4156510 .. 4156533 -  -7.4  -2.76242   ATGCAATAGACATCA          TCCCTGC-CTG AAC CAGCGCGGGGA          AGCAAATTAGCGTTG  58 32
IUJ39_RS20160 4156272 .. 4156291 -   -10  -5.81032   TAATGCGAAAAAAAA            GCCCGTAC TTTC GTACGAGC             TCTTCTTTGAAGATG 100 39
IUJ39_RS20155 4156091 .. 4156110 -   -10  -5.81032   TAATGCGAAAAAAAA            GCCCGTAC TTTC GTACGAGC             TCTTCTTTGAAGATG 100 39
        cspD 4152568 .. 4152588 - -12.6  -5.38958   AGCCAGAAATAAAAA            TGCCAGCC GATCG GGCTGGCA            TTTTGCCTCCTGGAT 100 62
IUJ39_RS20125 4148042 .. 4148056 -  -6.4  -3.39784   CGATCGTGAAGAAGA               GCGAGA ACA TCTCAC               CGCGCTGCCTGCGCT  56 284
IUJ39_RS20115 NONE
         hcp NONE
         hcr 4142756 .. 4142777 - -10.2   -4.7373   GCAGGGCAGGAAAAA           TGCCGGAT AAGTGG ATCCGGCA            AAGAGATTATGCGAG  91 32
        poxB NONE
        ltaE NONE
IUJ39_RS20090 NONE
IUJ39_RS20085 4136891 .. 4136903 -  -4.8  -4.11692   CATTGAGCTGGAAAA                TCGC GGCTG GCGA                ATGTCCGGCGGGGTG  62 475
IUJ39_RS20050 4132637 .. 4132667 -  -9.9  -3.37513   AGATGGTAAGACGAA      TTGTC-GGCATTCC GTAC AGAATGCCAGACAA       TTTACGGGTGGTATG  74 65
        artP NONE
        artJ NONE
        artQ NONE
        artM 4129492 .. 4129518 - -10.9  -5.63504   AAGTGGATAAAAAAA         GACGGACAGGT TAACC ACTTGTCCGTC         GGATTTATTCAATAT 100 118
        artJ 4128379 .. 4128393 -   -10  -3.34291   GATGAAAGAAAATGA               TGCTCC GGC GGAGCA               GTATCGCCGTCTGGG  76 275
IUJ39_RS19960 4118277 .. 4118297 - -14.7   -3.4093   AAAAAAACACCAATA            GCGCCCTCC GGC AGAGGGCGC            AGCCAAGGCAATCAG 100 37
IUJ39_RS19950 4115794 .. 4115830 -  -3.7   -5.4833   TCAGGCAACAAAAAA    CCCATCAACCTTG AACCGAAATGG CGGGGTTGATGGG    CTCCACAAAATGGGG  88 138
IUJ39_RS19940 NONE
IUJ39_RS19935 4112955 .. 4112979 -  -5.6  -3.57144   GCGGGGATTCGCAAA          CAGGCTAAGC GAGCG GCTATGCCTG          ATAAGCCTTCAGTTA  58 62
        ybjG 4110756 .. 4110784 - -14.7  -3.70902   CCCTGGAGAGTTAAA        TAAGCGCTCCGCA CCA TACAGAGCGCTTA        ATATTACTCTTTTTT 100 48
        deoR 4109606 .. 4109633 -  -3.2  -3.73775   GTCACGCCGATTAAA        CCTGACGCGACA TTTG TGACGCAACGGG         TCTGGTTTGGCGACC  53 369
IUJ39_RS19910 4107429 .. 4107448 -  -5.6  -3.13522   ATGGCTGCATGAACA            CGGC-CCGC GCG GCGGCGACG            AAATTAACATCCCGG  52 438
        rimO NONE
        moeA NONE
        moeB 4096725 .. 4096744 -  -3.6  -4.06185   CATATAAAGATTAAA            TTACTTTC GAAT GAAAGTTA             TCTTGATGTGCGTCA  57 268
IUJ39_RS19860 NONE
IUJ39_RS19855 4093280 .. 4093297 - -11.3  -3.14211   ATCCCTTCTGATTAA             CAGGCCT GCGT AGGCCTG              TTAAGCGTAGCGCCA  81 82
IUJ39_RS19845 4090445 .. 4090468 -  -7.4  -4.10453   CAAATGGTCGGAAAA          CGCGCGTATT GGCT ACTACGCGCA           AGACCATGAATACGA  74 498
        ldtB 4088114 .. 4088134 - -13.3  -3.48276   GGTGTCGTGAGAGAA            GCCCGACAG TGT CTATCGGGC            TTCGTAGTCCGGGGA 100 54
        mntS 4086190 .. 4086203 -  -9.5  -4.03167   TGAGAATGCAAATAA               CGCGG TGTA CCGCG                ACGCCGCGTTATTTC  81 34
IUJ39_RS19815 4084327 .. 4084344 -  -8.4   -5.0925   GGTGAAAATGAAAAA             TCCGCC TTTCGG GGCGGA              TTTTTTTTGCCTGGA  91 48
        rhtA 4082511 .. 4082543 -  -8.7  -2.78606   TGAATCAAGAGATGA      TATTCTGCATGAT TATGCAC ATCATGCAAAATA      AGCAACTATTTTACA  64 31
         dps 4081576 .. 4081594 - -11.7  -4.19953   TATTTAAGTGCAAAA             CCCCTGC GACAG GCAGGGG             TTATAGGGATTATTT  95 176
        glnH 4080408 .. 4080428 -  -5.3  -4.09243   GATATGGTGTGAAAA            CCGCAGGCA TAT TGCCTGATG            GCGACGCTGTGGTGT  63 106
        glnP 4079687 .. 4079698 -  -4.4  -2.95448   TTAAATTCAATCACA                GGAT TTTC ATCC                 TTCTTTCAAGACGAC  48 9
        glnQ 4078930 .. 4078955 - -16.1  -2.80113   GATTATTCCATGATA         CCCTCCCTGCC GCAG GGCCGGGAGGG          CGATATATCAGGAGA 100 33
        ybiO 4076150 .. 4076164 -    -7  -3.41569   TCATTCAGGCAAATA               CGGGGC TAA GCCGCG               CGATTCGTCTGCGTC  59 483
IUJ39_RS19770 4075170 .. 4075181 -  -2.2  -3.35679   TTTTGCGACGCAGAA                CGCT AAAA AGCA                 TGAGAGTAAAGGAAT  45 72
        ybiJ 4074533 .. 4074554 - -15.9   -5.8187   TAGCGAATAAAAAAA           GCCCGTCCA GAGG TGGACGGGC            AAATAAGGGTAACAA 100 154
        cecR NONE
        hlyD 4067910 .. 4067926 -  -3.6  -3.65046   CGTGCAGCGTAATAA              CGGCCT CACTC ATGCCG              TGCCTCGTCATTAAA  51 14
IUJ39_RS19735 NONE
IUJ39_RS19730 NONE
IUJ39_RS19725 4063550 .. 4063562 -  -4.8  -4.46212   TGCTTCAGGAGAAAA                GCCA TGAAG TGGC                AACAACGCGTTCGTG  70 388
IUJ39_RS19715 NONE
        clsB NONE
IUJ39_RS19705 4060090 .. 4060102 -  -3.3  -3.81951   GGGTATACCACTAAA                CGCGA TCT TAGCG                GTTTCGGCAACATGC  53 385
        yvcK 4055562 .. 4055574 -  -7.7  -3.35438   TAGCAGAGGGGAGAA                GGCTT GGG AAGCC                TGTTTGCCAGGGGCT  65 84
        bioA 4045028 .. 4045044 -  -2.2  -3.36803   GAAGTGTAGCCAGAA              GCAGCA TCGCT TACCGC              TGATTAATGGCTAAA  45 29
IUJ39_RS19630 4044100 .. 4044122 -  -5.5  -4.33417   GCCAGCGAGAATAAA          GCGCTG-GCG CACC CGCACAGCGT           GGATAGCCTGCCGAC  70 417
IUJ39_RS19600 4035650 .. 4035683 - -14.7   -4.3534   GGCGAAGCAGTAAAA     CAACGGGACGCTGCAT TTG ATGC-GCGTCCCGTTT     ATAAGCATGAACCGG 100 49
IUJ39_RS19595 NONE
IUJ39_RS19590 4032799 .. 4032823 - -11.4  -3.09004   GCACCTCTAAAACTA          CCGGAGGTGG ATCTA CCACCTCCTG          AAATTAAGTCCGTTT  79 43
        iucA NONE
        iucB NONE
        iucC NONE
        iucD NONE
        iutA 4020114 .. 4020126 -  -6.3   -3.7511   CGGTTTAGAACAGAA                CTGAA TAG TTCAG                TCCAAAGGTGCGACC  64 2
IUJ39_RS19530 4017508 .. 4017526 -  -3.8  -3.72695   ATTCTCTCGACGAAA             TTCTCCAC CTG GCGGATAA             AGTCATGGTGCTGGA  56 492
        modE NONE
        modF 4012671 .. 4012685 -  -4.9  -5.25656   AAAAGCACGAAAAAA               GGCGC TTTAC ACGCC               CGGAGTGGCATTAAG  82 36
        galE NONE
        galT NONE
        galK NONE
        galM 4008194 .. 4008218 -  -9.3  -3.68324   GATCTGTAATAAATA         GCCCGGCAGA TTAGCG TC-GCCGGGC          ATATTGTCAGAACGG  75 32
        gpmA 4002244 .. 4002260 - -13.7  -3.58533   TCATAACGTGTTAAA              CCGGCCT GCA AGGCCGG              TTTTTTTATCGCTGG 100 425
IUJ39_RS19440 4000428 .. 4000445 - -11.3  -5.54907   CTGACAAAATAAAAA             GGAGAGC GAAA GCTCTCC              CGTTATCAGACTTTT 100 48
        zitB 3999382 .. 3999408 - -13.6  -3.35046   GCATGTGGGTAAATA         GCGCGCGGGAGC GAG GGTCGCGCGCGC         TTTCCCATTAATGGT 100 33
        glmS 3986045 .. 3986061 -  -3.7  -4.07868   CGATATCGACAGAAA              CTATCTG CAT CACATAG              CCTCTTCAAGACAAT  59 18
        glmL NONE
IUJ39_RS19325 NONE
IUJ39_RS19320 NONE
IUJ39_RS19315 NONE
IUJ39_RS19310 3980236 .. 3980248 -  -3.4  -2.81413   TACGAAGTAACAGCA                GAGT CCTGT ACTC                CAATGGATGTTGTTA  43 50
IUJ39_RS19305 3978772 .. 3978818 -  -5.1  -3.30124   GCGTAGGCCGGATAA GCAGTGGCGCTATCCGGA-ATC ATGC GTTATCAGGACATCGCCACTTC TGAGTTTTCGGAGGC  54 8
IUJ39_RS19300 NONE
        cobO 3976379 .. 3976416 -  -9.3  -2.59431   TCCCGGGAGAACTGA   GTTCTGTAAGCCGGATAA GCG CTATCCGGC-TACAATAC   GTCTACCAGTCAATA  66 28
IUJ39_RS19235 3962308 .. 3962335 - -12.8  -3.29613   AAAGGGGAAATGTAA        CGGATGGCGA TGGTTGTG TCGCCATCCG         GTTTTCAATTAACGC  90 34
IUJ39_RS19230 3960696 .. 3960706 -  -5.4  -3.70902   CGTCTGATATCGAAA                 TGCT GAC AGCA                 GAGCAGCTCACGACG  58 482
IUJ39_RS19190 3954605 .. 3954633 -  -5.9  -3.96327   ATTGTGGATCACAAA        CAGGCGAGAATCG CGA CGCTTTCCGCCTA        TGAGGCGGCGAGAAA  63 89
        kdpF NONE
        kdpA NONE
        kdpB NONE
        kdpC NONE
        kdpD NONE
        kdpE 3941796 .. 3941809 -  -3.9  -4.44608   TTTATTTAAAAATAA               TGAAT AGCT ATTCA                TGGCATAAAGCGATA  66 23
       speFL 3941385 .. 3941397 -  -4.8  -2.75647   CCTGAATGACATAAG                GGTC GGAAA GACC                TGTATGCTGAAGTAC  49 55
        speF NONE
        potE 3937497 .. 3937527 - -14.6  -3.81539   ATTCAAAGAGTGAAA       TGCCCGGACTGCCG TTG CCGCAGCCCGGGCG       CGCCATCAGCCGTGT 100 31
IUJ39_RS19120 3936890 .. 3936905 - -10.4  -5.12068   GATATGGAAGAAAAA              GGAGCC GTAA GGCTCC               TTTTTTGTATTAACG  93 104
        ybfF 3933657 .. 3933695 - -13.1  -2.71325   TCAGCGAGAAAGCGA  CGCCAACGCCCGCGCGCG TAAT CGCGCACAGGCGATGA-G   TTTTTAATCAGTTAG  85 37
        ybfE 3933264 .. 3933283 -    -3   -3.5032   CTGCTACACGAAATA            TG-AAACAA AAC TTGTTTTCA            GACTAAACCTGGCCG  48 28
        fldA 3932424 .. 3932440 -  -2.9  -4.55128   ATGCCGAAATGAAAA              CCGCAAG TAT CTCGCAA              GAGTTAATAAAACGA  63 185
         fur 3931830 .. 3931847 - -11.3  -5.40625   AGAGGATATAAAAAA             GCCAACC GGGC GGTTGGC              TCTTCGAAAGATTTA 100 44
        nagB 3921977 .. 3922002 -  -5.3  -2.87672   GATATCAAAAATTTA         CTGCCCCGC GTTGACTG GCAGGGCGG          AGACAACATTACAGA  50 34
        nagA NONE
IUJ39_RS19040 3919512 .. 3919528 -  -3.7  -2.86177   ATATCGCAGATTACA              TTCTTGA TGG TCATGAA              CTACCCAGGGAATTT  46 69
        nagD 3918665 .. 3918679 -  -2.8  -5.64274   TGATTGATAAAAAAA               GCATAT GTA ATGTGC               TTTTTTATTAAATAA  89 119
        asnB 3916831 .. 3916846 -  -6.8  -5.60993   TTTGTCATAAAAAAA              GAGCCC CTAA GAGCTC               TTTCGTCATGGTTAT 100 41
IUJ39_RS19025 NONE
IUJ39_RS19020 NONE
IUJ39_RS19015 NONE
IUJ39_RS19010 NONE
IUJ39_RS19005 NONE
IUJ39_RS19000 NONE
IUJ39_RS18995 3915922 .. 3915937 - -10.4  -5.15526   ACAGAAAAGCAAAAA              GCTCGC CGAA GCGAGC               TTTTTTAAGTTGGCT  93 36
        miaB 3912999 .. 3913031 -  -4.8  -4.29325   GATGAAGAGGGAAAA     TTG-CAAGGCCCGTC GGGC AACGGGCCATGACCA      GTAGGCCCGATAAGC  65 77
IUJ39_RS18980 NONE
        ybeY 3911331 .. 3911367 -    -8  -3.19848   CAAAATGCATGAACA   CAGGCGGGATAA-GGCG CATG CGCCGCTATCCGGCATG    CTATTCCTTCTCGGC  64 26
        corC NONE
         lnt NONE
IUJ39_RS18960 3907373 .. 3907389 - -12.3  -5.76949   TACTCCGAAAAAAAA              GGGTAGC AGC GCTACCC              TCGAAGATTATTGCC 100 149
IUJ39_RS18955 NONE
        gltK NONE
        gltL 3905183 .. 3905204 -   -13  -2.90714   GTAAAGCGTGAGATA           GCGCGCAC TTTGAT GTGCGCGC            CGGGAATGTTAGTGC  86 34
        rihA 3903742 .. 3903758 -  -2.2  -3.15663   ACCGAGTTGGATGAA              TTGACG CGCGC CGTCAG              ACGCGATCTGGAAGA  43 428
        leuS NONE
        lptE 3900164 .. 3900182 -  -2.5  -2.72471   TGTTCAGGATACAAC            CTG-ATCA TTAG TGATTCAG             CGTAGTGGAGACGCG  41 14
        holA NONE
        nadD 3898381 .. 3898396 -  -3.2  -2.87211   ACGGTTGCTGACACA              GCGGAT TTTA ATCCGT               AGCTGCGCTAACTAC  42 126
IUJ39_RS18905 3896662 .. 3896678 -  -5.1  -3.78934   GGCTGCGGAGAATAA              CAGCC TGTCGGG GGCTG              TCAATGGGCGAAACC  59 69
        rsfS NONE
        rlmH NONE
        mrdA NONE
        mrdB NONE
        rlpA 3891437 .. 3891456 -  -6.4  -2.73797   ATTTACAGAAATTGA            CAGTACGG ACGC CCGCACTA             GGTTACTGCGCGCTG  53 28
        dacA 3890027 .. 3890057 -  -9.9  -5.48825   CATTACGTAAAAAAA      TAATAACTCCCGCC AAAG GACGGGAGTT-TTA       CTGATGCATAGTATA 100 76
        ybeD 3889701 .. 3889724 - -12.5  -3.84246   CGGGGAAGGAGGAAA          GTTACCCGG ACAAGG CCGGGTAAC           CGTCTGGATGTATTA 100 38
        lipB 3888849 .. 3888863 -  -8.6  -3.10597   TTGCTTACGGAAAAT               TCCTCA TCA TGAGGA               CTGAAGAGGCCATAC  66 159
IUJ39_RS18860 3887646 .. 3887670 -  -4.9  -3.38768   GTATATCATTGATAA          GGGCCATAAAG CAG CCTGACAGCCC          GGCAAAATGTAAAAT  54 98
        lipA 3886520 .. 3886534 - -11.4  -5.21709   CTGCAGAGTAAAAAA               CCGGCA ATT TGCCGG               TTTTTTACTGCCTGA 100 63
        crcB 3884864 .. 3884880 - -10.8  -4.20042   AGCAAGATTTCAAAA              CCCGCC CTCCT GGCGGG              TTTTTTTGGCGCTTA  88 38
        citC NONE
        citD NONE
        citE NONE
        citF NONE
        citX NONE
        citG NONE
        citT 3872552 .. 3872577 - -17.7  -5.37345   TTTAATCATAAAAAA         TGCCGTTCAGG CGGA CCTGAACGGCA          TCATTTTTAACCTGC 100 54
         rna 3871514 .. 3871536 - -12.7  -5.07652   GGTCCCAAAAGAAAA           CCCTCACCG TCTGG CGGCGAGGG           TTTAACTCTCATGAT 100 179
         rnk 3870991 .. 3871010 - -12.2  -3.75897   AAGGGCTAACGGAAA            GAGGATGC GTAG GCATCCTC             TGTGTAAACGCATTA  93 60
        uspG 3869019 .. 3869046 - -15.6   -5.1356   TCTTAGTAACAAAAA        GCCCTGTCAGGA TTGC TCCTGGCAGGGC         TGTTGTCGTTCCGGG 100 50
        dsbG 3865231 .. 3865259 -  -4.8  -3.66378   TAGAGTTTATTCAAA       CTAAAATA-CCAC AGTT GTGAATATTTTAG        CGAGTAAATAATTAC  57 210
IUJ39_RS18740 3864170 .. 3864183 -  -3.9  -3.33901   ATCAAGTAAATAAAT               CATAT TGAA ATATG                CGTTAAATTTATATT  50 65
IUJ39_RS18735 NONE
IUJ39_RS18730 3861882 .. 3861904 -  -8.3  -3.01712   CGTTTTGCGTCAATA           CGCCGGCGC AGTTG GCACTGGCG           GATATGCTGCGCGCC  62 353
IUJ39_RS18720 3859563 .. 3859587 -  -8.5  -3.13403   CTTTTTTCATTAATA          GCCCTCTCC AGGACAA GGGGAGGGC          GCTTGAATGACAGGT  67 294
        fepB 3850916 .. 3850929 -  -3.8  -4.09685   GTGGACCGCGCAAAA               CGTC ACGGGA GACG                CTATCGGCGCGGCGC  60 252
        fepD NONE
        fepG NONE
        fepC 3846911 .. 3846931 - -11.2  -4.81551   GATTTACACGAAAAA            GCCGGATA GCGAT TATCCGGC            TTTTTCGTATGTATG 100 46
IUJ39_RS18635 3837694 .. 3837719 - -13.3   -3.5393   ATGATCTCTTTCAAA         CTCCCTCCCCC GAAT GAGGGAGGGAA          GGTTGGCATCAGAAA 100 34
IUJ39_RS18625 NONE
IUJ39_RS18620 3835507 .. 3835519 -  -5.5  -4.88918   TTACCGTAAAGAAAA                GCATG GCG CACGC                ATTGAAATGCTTAAT  80 36
IUJ39_RS18610 3834262 .. 3834272 -  -4.6  -3.04517   AGTGTTCGGTAAAAG                 GCCG TTC CAGC                 GCAAAGCGTTTTGCG  49 66
        nfsB 3833159 .. 3833176 - -12.7   -5.1361   AGAAAGGTGAAAAAA             GCCGGAC GGGC GTCCGGC              TTAGGCAGGGGATTA 100 38
IUJ39_RS18595 NONE
IUJ39_RS18590 NONE
IUJ39_RS18585 NONE
IUJ39_RS18580 NONE
IUJ39_RS18575 NONE
IUJ39_RS18570 3828242 .. 3828257 - -11.8  -4.66609   TAGTTCAGGGAAAAA              GGGGCG CTAG CGCCCC               GCAGAAGAAAGGTCT 100 116
IUJ39_RS18555 3821320 .. 3821336 -    -8  -3.40597   GTGTTTATTCAAATA              GCCGAA TGCTG TTCGGC              CTGTCCATACAAGGC  62 486
IUJ39_RS18545 3818610 .. 3818626 -  -7.9  -2.71144   TATCGTTTTTAATCA              CCACGCC GGA GGCCTGG              GTTATGCCGCTGGGC  57 260
        rclR 3815367 .. 3815399 -  -6.8  -4.60041   ATCGATCGGTAAAAA      TGCCCGCCTGCGGC GTCAA ACTGTAGGCGGGCC      CGGCGTACGTTTATT  79 36
IUJ39_RS18515 NONE
IUJ39_RS18510 3811296 .. 3811345 -  -4.5   -3.2592   AGAGAAATGAAGAGA GGCGATA-CCCATCGGGATAAAG GTCATG CTGTATCCCGATGCGTTAT-ACC TACAAAAGAGTTCTG  50 52
IUJ39_RS18505 3808053 .. 3808076 - -16.8  -5.08011   AAAAGGTTCAAAAAA          TCCCCCGACA ATAT TGTCGGGGGA           TTTGTGTATAAGAGG 100 86
IUJ39_RS18495 3806312 .. 3806325 -  -8.1  -2.99649   ACATGTGCATATAGA               GCGAC TGTA GTCGC                CACCCTGTTAGTACT  62 511
        cdtB NONE
IUJ39_RS18470 3803862 .. 3803872 -  -5.4  -3.75115   GCCTGAGAAAATTAA                 TCAC ACT GTGA                 AATATGAGAATTGTA  61 11
        fimW 3801493 .. 3801503 -  -3.2  -2.89881   TATGCAGCTCAGATA                 CAAG GTT CCTG                 GATGTCCTTTCAAAT  44 200
        fimY 3800368 .. 3800379 -    -3  -3.71819   AAATAATATAAAAAG                CTAA TTGT TTAG                 TGTTTGTTATGTAAA  52 225
        fimZ 3798962 .. 3799004 - -12.6  -3.79419   CTGGCCGACAAAACA GCTTCACGCCGCCGGTGACG CCA CACCACCGGTGGCATTTAGC CTGAAACTTGAAGGC  91 365
        folD NONE
        ybcJ 3791537 .. 3791549 -  -6.2  -3.30441   TAGTAGGCCGGATAA                GGCG TTAGC CGCC                ATCCGGCGCATTCAC  59 50
        ppiB NONE
        lpxH 3788580 .. 3788590 -  -2.4  -4.08394   ACATGTGTCTTAAAA                 CTCC TGT GGTG                 CGGGACACGCTGCTT  55 121
        purE NONE
        purK 3786964 .. 3786980 -  -2.2  -3.56092   GGAGGAGCCGGGAAA              GGGGAA GATCA TTCACC              CGGCATTTTATGTGT  47 40
        mnmH 3785540 .. 3785556 -  -9.4  -2.52464   TGTTGCCGGAAGCCA              GCGCAG GGCTG CTGCGC              GGCCTGACGATTACG  62 283
        tesA NONE
IUJ39_RS18330 NONE
        cnoX 3777062 .. 3777088 -  -4.3  -2.59742   CGGAAGTTCTATAAT         TCGCGTCACCA GTTAG CGGCGACGCAG         CTCAAGAAATCATGA  46 127
IUJ39_RS18310 NONE
IUJ39_RS18305 3773975 .. 3773995 -  -3.9  -5.08824   CGCTGATGTAAAAAA            GCGGACTTT AGA AAAGGTCGC            GGAGATAGAGCGCCA  79 168
        copA 3771046 .. 3771080 -  -9.3  -4.09685   CGCGAGGTGGGAAAA    GGCCGGATAGTAACGC GAAA GCGTCT-TACCCGGCC     TGGTTAAATTCTGCC  80 64
IUJ39_RS18290 3770101 .. 3770120 -  -3.4  -3.11291   GCGACAATCTGAAGA            TCCGAAGC GAAA GCGTCGGG             ATAATAATAACGATG  45 83
        ybaK 3769138 .. 3769148 -  -8.2  -3.83026   GTGGCGCAGATGAAA                 CCGG ACT CCGG                 CGCCTATCCACAGTT  72 374
IUJ39_RS18275 3766351 .. 3766377 -  -8.8  -2.99471   GTATCGGGATAGACA         GGCGGCTAAA GCATAAT TTTAACCGCC         ATGAGATCAGGCTTT  66 32
IUJ39_RS18270 3764003 .. 3764024 -  -7.9   -4.4518   AAGCAAAACGTAAAA           CCCAGCATC CGTT GCTGCCGGG            GGCTATCGCTGAATT  82 494
         aes 3761897 .. 3761926 -  -2.1  -4.13561   GGGCGGCAAAAAATA       CGCGT-ACATTCCG GCG CTGAATGCGACGCC       GGAACACATTGATAT  56 68
        priC NONE
        rsmS NONE
IUJ39_RS18205 3751805 .. 3751818 -  -3.1  -5.24449   GAGAAAGTCAAAAAA               GTCCTG CTA CAGG-C               GGCGATGGAGCATCC  82 356
        acrA 3746644 .. 3746658 -  -2.8  -3.14878   CTGTTTAAGTTAAGA               CCTG GGCTGAG CAGG               CTGATTACCGCTTGC  45 5
        acrB 3743432 .. 3743447 - -11.8  -5.47218   TTTTACGCAAAAAAA              GGCCGC TTGC GCGGCC               TTATCAACAATCAGT 100 44
        tomB 3742563 .. 3742579 -  -2.3  -2.79133   TAATGGTTTATCAGA              CATAAAT TCT ACCTATG              ATTGTAATAATTTTT  40 39
         hha NONE
         maa 3741553 .. 3741563 -  -2.4   -2.7634   AAGCCTATTTTAAAT                 GCAG TCA CAGC                 GTGAAAAAAAGTAAC  40 79
IUJ39_RS18165 3740998 .. 3741021 -  -8.1  -2.94322   AGTTCAGGGAAAGCA          GTGCGTACC AGGGAG GGTGCGCAC           TTTTTTATTACCGGC  61 33
IUJ39_RS18150 3738555 .. 3738571 -  -2.9  -4.16842   CGGATGCGCAAGAAA              CCAGCAT CCG ATGCCTG              ATGGGTTGCAATTGC  58 246
IUJ39_RS18140 3737831 .. 3737844 -  -2.3  -4.56597   GTGCTGTCGCAAAAA               GCGGT ACGT ACCGA                AGGTAAACAGGCGCC  63 353
        tesB 3736428 .. 3736440 -  -9.1  -3.31461   CAGCCACGGTGAGAA                CGCGT ATA ACGCG                TGATTGCGCACCATG  71 80
        cdsH 3729329 .. 3729347 - -10.3  -3.14344   GATCTCTTCCAGCAA             GCCAGAC GTTCA GTCTGGC             TTTTTTTATTGGTTT  74 41
IUJ39_RS18090 3726643 .. 3726654 -  -2.2  -3.87994   AGTTATCCTGATAAA                TGAC GAAA GCCA                 ATATGGTAACGCGTG  53 63
        queC 3725891 .. 3725904 -  -8.1  -3.30124   TTGTAGGCCGGATAA               GACGC ATCA GCGTC                GCTATCCGGCAACGT  65 53
IUJ39_RS18035 NONE
        ampG 3712784 .. 3712798 -  -2.2  -3.71255   ACAATTACTTAACAA               TTTATT ATC AACAAA               AAGACAATCGGCGTC  49 210
        cyoA NONE
        cyoB NONE
IUJ39_RS18015 NONE
IUJ39_RS18010 NONE
        cyoE 3707662 .. 3707692 - -10.7  -4.39568   ATTGAGACAGTAAAA      TAACAGGATTCATC TCTC GATGA-TCCTGTTA       TTTTTATATCACGTG  90 70
IUJ39_RS18000 3706228 .. 3706254 - -16.7  -3.37796   TTGCAGTATTGAGAA         CACCTTCACCC GGTCT GGGTGAAGGTG         GCTATTTATAGCAAC 100 51
IUJ39_RS17995 3704106 .. 3704116 -  -8.2  -3.29461   TAACGGCGTGGATAA                 CGCG GTC CGCG                 AGGTTGAGTCACGTT  65 491
        panE NONE
        yajL 3702046 .. 3702064 -  -3.8   -2.8789   AAGTGGTAGAAGAAG             CGAACAAC GTT GATATTCG             TGAAATCGCCCAGCA  45 415
        xseB NONE
        ispA NONE
         dxs 3697452 .. 3697464 -  -5.5  -3.65351   CGACCGTTATTTAAA                TCCGA CCA CCGGA                TGCTGCTTGTACGGC  59 232
IUJ39_RS17920 3692333 .. 3692343 -  -6.8  -5.47218   CGGGAGTGAAAAAAA                 CGCA ATT TGCG                 TTTCTAAATATTTCG 100 272
IUJ39_RS17915 3691398 .. 3691415 - -10.5  -3.04263   ATTTTATCGTGAATA             CGCCGGA GATT CCCGGCG              TATTACGCGAATCAG  73 37
        acpH 3684700 .. 3684710 -  -2.4   -3.6502   TATCTGGCAGTCAAA                 GCGC TTT GCGG                 GCGGCCTGTGCCATC  49 10
IUJ39_RS17875 3683847 .. 3683864 - -12.7  -5.03715   AGCACGCGTAAAAAA             GGCTCGC TATC GCGAGCC              TTTCGTCAATATACT 100 44
        sbcD NONE
        sbcC 3671900 .. 3671914 -  -7.8  -4.19735   CTGCCGAAAATGAAA               GCGCAT GTT ACGCGC               CGTGGCTGTGAACCG  76 163
        araJ 3670562 .. 3670573 -  -5.8  -3.29144   TGAGCGCCTGTACAA                GACG GTTC CGTC                 GCTGATGAAATCGTT  56 159
        rdgC 3668706 .. 3668735 -  -4.3  -2.72344   CGCTATTTGTAAGGA       TGAGTCCCCTCT TCGACAG AGAGGGG-CTCT       CTTATTAGCGTTGCG  47 30
        proC 3665018 .. 3665060 -  -2.8  -4.18676   TTATAAAGCAAAGAA TGCCGGACGT-A-ACCGC-AC CGAA GTAGCGGCATGACGTCCAGCC GGGCCTCAGGATTTA  58 31
        ddlA 3659319 .. 3659346 - -10.6  -3.76167   TGATAAGGCAAAAGA        CGCCCGATAAACG TAG CGCT-ACCGGGCG        TGTGTTATTACATCG  85 33
IUJ39_RS17755 3658326 .. 3658346 -  -2.5  -5.00616   TGGCGTTTGAAAAAA            CGACGCTCT ACA AAAACGTCT            ATAAACTGGCCGAGG  71 215
        ampH 3654627 .. 3654662 - -14.8  -4.78753   CGAATATTAACAAAA    TGTCGCGCCTCATC TGATATGC GGTGAGGCGCGACA     ACTCAGGATGCAGGA 100 28
        hemB 3652921 .. 3652939 - -13.8  -3.95219   TGTAAAGTCGAGAAA             GGGCGGCA GAG CGCCGCCC             TGTGACAGAATTAAC 100 36
        prpR 3645297 .. 3645321 - -12.2  -4.91109   GTTGGATCATAAAAA         TACCCGCCTGG ATTT CC-GGCGGGTA          TTTTTTTATTGGCAA 100 53
IUJ39_RS17695 NONE
IUJ39_RS17635 3631296 .. 3631311 -  -2.6  -4.78848   TGGTGAAACACAAAA              TATTCG TCTA CAAATA               AATTCGCAGAACTGT  68 139
IUJ39_RS17590 3621703 .. 3621723 -  -8.2  -4.91109   CCTTTATCATAAAAA            TAGGGCGC TTCAC GCGCCCTG            TTTCTTTATCTTGGA  87 31
IUJ39_RS17555 3616446 .. 3616463 -  -8.4  -2.79291   AAAGCCTACTAACGA             CCCGGA GACTGA TCCGGG              GGGGAGTAATAAAGA  60 276
IUJ39_RS17445 3600134 .. 3600145 -  -3.6  -4.48987   CCGTCAGAAGCAAAA                CAGC CGGA GCCG                 ACGCCGCTATGCTCG  67 215
IUJ39_RS17320 NONE
IUJ39_RS17315 NONE
IUJ39_RS17310 3586083 .. 3586103 -  -6.8   -5.4756   AAGGGCAATAAAAAA            CCCGGC ATGGTTGGG GCCGGG            TTAGTAATAAAACTT 100 39
IUJ39_RS17300 NONE
IUJ39_RS17290 3584978 .. 3584992 -  -4.2  -3.12327   TTTTTAGATGTAAGA               TCCCCG GGC CAGAGA               TAGCGCCCATTGGGT  47 124
IUJ39_RS17285 3581747 .. 3581757 -  -5.4  -3.33696   GTGCTTCGTAACCAA                 GAAC GCC GTTC                 ACCAGGTGTGTTTTC  56 279
IUJ39_RS17275 NONE
IUJ39_RS17270 NONE
IUJ39_RS17265 NONE
IUJ39_RS17260 3578249 .. 3578261 -  -4.8  -3.12895   CTCCGTATGAACACA                CCCT TATTC AGGG                CCGATATAGCTCAGT  51 115
        phoE 3574393 .. 3574436 - -20.4   -3.2964   AAATTGTCGGCATAA CCTCATGCCGGATAGCGGCG TTAA CGCCGCTATCCGGCACAACA TGGTTCATCAGAACT 100 33
        pepD 3570410 .. 3570433 - -13.8   -5.1861   TTCATCATTAAAAAA          TCCGCGCCCC TGCT GTGGCGCGGA           TATCATTACTTCGCG 100 31
        dpaA 3568092 .. 3568113 -  -8.7  -3.91084   TGACGGGGAATGAAA           CCTGGCAAA AGAT TATGCCAGG            CGAATGGGCGTTATT  74 36
        fadE 3564010 .. 3564028 - -13.1  -5.08088   AAGCGGCAAGAAAAA             GCCCCGC GAAAA GCGGGGC             AGGAAAGACGCGAGA 100 45
IUJ39_RS17190 3563146 .. 3563159 -  -4.5  -2.97676   ACGGAGTGAAACAAT               CCCAC AGCA GTGAG                TGGCAGGCTGGTTAC  48 37
IUJ39_RS17185 3562570 .. 3562593 - -11.8  -3.99405   CTAACCCAGGATAAA          GCCCGTCATT CATG AATAACGGGC           AAAAATATTTACTCA  93 34
        pagN 3560591 .. 3560607 -  -7.9  -3.49653   ATTATGCCCAGAGAA              CAGGCGC GCG GCGGCTG              AACGCAGACGGCCCT  67 282
        rnhA 3526361 .. 3526386 -  -3.3   -4.3295   CTTAATAAAAGTAAA         GCGCCAA TTCGCCAGACCG TTGGCGC          CACCCGGCAATATCG  62 53
        gloB 3524863 .. 3524875 -  -3.3  -2.93623   TTGCTTAAAAGACGA                CCGAT CAT AACGG                CGAAGTTAACGAATG  44 55
        mltD 3523421 .. 3523441 -  -7.5  -5.56112   ATAAAAATTAAAAAA            GGCACCG GGGGAAG CGGCGCC            TTTTGGCTTTTCCGT 100 50
IUJ39_RS16995 3520635 .. 3520656 -  -7.3   -3.1552   CGCCACTTATTAAGA           GCCCTGA GTCTATGT TCAGGGC            TTTTTTGGTTATTGT  62 79
        metN NONE
IUJ39_RS16950 NONE
        metQ 3511524 .. 3511541 - -12.7  -3.64915   TTGCATAAATGACAA             GACGGGC AATA GCCCGTC              CTGAATAATATTACA  95 63
        rcsF 3511052 .. 3511076 -  -2.1  -2.90349   TGCTCAAACTGAAAG          CTGCTCATTTC GCC GAAATATTCAG          GGCAGAACCGATACA  41 5
        tsaA 3510271 .. 3510289 - -13.2  -3.13343   AGTTGAACGATCGAA             CAGGCTCA ATG TGAGCCTG             ATACAAAAAAAGTGA  91 88
        proS 3508455 .. 3508475 - -16.9  -5.00851   ACTAACTAAATAAAA            GGCCTCGCA TGG TGCGAGGCC            TTTACATATCTGCCG 100 73
IUJ39_RS16910 NONE
         rof 3506066 .. 3506080 -  -7.1   -4.4727   GGAAGACGCATAAAA               TGCCG GATTG CGGCA               AAAATGCCTTATCCG  80 51
         map 3478770 .. 3478798 - -10.4   -5.1675   CCACCCATTAAAAAA       CCGGATGAAAGCG CGAA CGCCTT-ATCCGG        CCTACGGGATAATGC  93 84
        glnD NONE
        dapD 3475196 .. 3475209 -  -9.5  -2.79878   TTCAGTTATGCAAAG               GGGGC GGTC GCCCC                GTTTCTCACTCGCTT  69 39
IUJ39_RS16775 3472780 .. 3472796 -  -6.5  -2.78384   GGGCCGGGCAGTATA              GCGCGAT CAT ACCGCAC              GGCGCGCACCACGAT  51 465
        mtnN NONE
        btuF NONE
IUJ39_RS16745 3466272 .. 3466286 -  -5.6  -4.68994   ATGACCATCGAAAAA               CAGGGC GTT GGCCTG               GTGGTTGACCCGATG  75 282
        hemL 3463039 .. 3463065 -  -8.7   -4.8667   CAGAGCCGATAAAAA        GCCGGAT-GGCG TATG CGCTTATCCGGC         CTACCGATAGCGCAT  89 88
        thpR NONE
        sfsA 3450320 .. 3450331 -  -5.8  -4.25283   ACCCTGTGAGGAAAA                GCGT ATTT ACGC                 ACGCGGCCAGAATAC  67 64
        dksA 3449691 .. 3449708 - -12.7  -4.24183   GACAATAAAGAATAA             GGCGGGA AAAC TCCCGCC              TGTCATAAATAGGGT 100 55
      gluQRS 3448689 .. 3448701 -  -3.3  -4.10657   GCAGACGGGCTAAAA                GAACG ACG CGCCC                CAAGGCTGTAAGCAT  57 97
        pcnB NONE
        folK NONE
        panB 3445750 .. 3445778 -  -4.4  -2.96274   GGCCTGATAAGCATA        GCGCCATCAGGC ATTTG GGCTGGTGGCGA        CGCAAAAGCATCCTG  48 71
        panC 3444463 .. 3444485 -  -8.4  -3.72592   AACTCTTATCAATAA           CGAAGCAGGC GGC ACCTGCTTTG           AGAAAATTCTCAGGC  75 390
        panD 3443904 .. 3443922 -  -4.4  -5.07107   CAAAGCGGCAAAAAA             TGCCGGGT TTC ACCTGGCG             GTGACAACGGTGAAA  81 157
         can 3439379 .. 3439394 -  -3.2  -4.13767   CCCGCGACGTGAAAA              TCCTGA AAGA TCTGGA               TGAGGATATTCGTGG  58 380
IUJ39_RS16620 3436509 .. 3436528 -   -15  -3.30124   CGCCACCCGGCATAA            TGCCCGGC ATGC GCCGGGCA             TTAATGGTTATTTCG 100 33
IUJ39_RS16610 3434132 .. 3434151 -  -8.6  -3.71487   CATCATAGCTAACAA            TGACCGTA GATG CACGGTCA             TTATTTCAGCAATAT  72 174
        speE NONE
        speD 3432370 .. 3432389 - -10.7   -4.7254   ATTTTGCAGCAAAAA            CCGGAGC TTCCTT GCTCCGG             TATTAATTTACACGG  95 33
IUJ39_RS16565 NONE
IUJ39_RS16560 3420912 .. 3420941 -  -8.6  -4.49981   CACAGCATCAGAAAA       TCACCCACACGC GTGAAG GCATATGGGCGA        CCAATTCCGGCAGCA  85 158
        aroP 3411314 .. 3411333 -   -15  -3.33525   GTGAGGCAGATAACA            CCCTCCCC GGGC GGGGAGGG             AAGGCATAATGCATA 100 55
IUJ39_RS16525 NONE
IUJ39_RS16520 3408676 .. 3408686 -  -8.2  -3.74347   CTGACAAAGTGGAAA                 CGCC AAA GGCG                 GCGGTGTCGATGGCG  72 172
        nadC 3406340 .. 3406362 - -13.4  -2.92091   ATAGGGATTTATAGA           CCCGACGGCA TAG CGCCATCGGG           TGGAGAGGATCAGCG  86 35
        ppdD NONE
        gspE NONE
        hofC 3402627 .. 3402656 -  -4.1  -4.57569   CGACGCGTGTAAAAA       CCGGCGTCGGTTA TCCG CAACTGTCGGCGG        TTATCGAATGTGCTG  67 496
        coaE NONE
        zapD NONE
        yacG 3399922 .. 3399945 -  -4.6  -3.14881   CAATGTGCGCATTAA          CTGGGGATC TCAATAC GATCCCC-G          TTGATCTTATTATCG  50 343
        leuL 3369118 .. 3369135 - -14.1  -5.64274   TCAGGCATAAAAAAA             CCCGCGC AACG GCGCGGG              TTTTTGTTTGACTTC 100 49
        leuA NONE
        leuB NONE
        leuC NONE
        leuD 3364256 .. 3364274 -  -4.4  -4.56961   AAGACGTATAGAAAA             TGCCGGAA TAT CCCCGGCG             CTGGAGACCGATGAC  69 140
        sgrR 3360944 .. 3360968 -  -7.2  -3.62518   TTAAAGAGTGGCAAA          GGACTTGAGA GGTAG CCTCAAATCC          CTTCGCCGGCATTAT  67 138
        thiB NONE
        thiP NONE
        thiQ NONE
        araB 3353816 .. 3353826 -  -2.4  -3.48529   ATAATTATCAAAAAT                 CGTC ATT GTCG                 TGTCCTTAATGAGTC  47 31
        araA 3352234 .. 3352257 -  -8.9  -3.04501   ACTAACTCCTGAATA          CCGGATG-GC GCTTT GCTCATCCGG          CCTACGAGGTTGGTG  68 87
        araD 3351492 .. 3351511 -  -9.2  -3.17941   ATCAGACTTCATCAA            CGCGCCCC AAAT GGGACGCA             CCTTTAGGGAATTAC  70 37
        polB 3348018 .. 3348047 -  -3.5  -2.70143   ATTGCAAGTATACGA       CCCCGCTACCA GGCTAATG TGGTAGTGGCG        TTAATTAGGTCCAGG  43 88
        rapA NONE
        rluA 3344307 .. 3344349 - -12.9  -3.06183   CGGATGGCGACGCAA GCGTCTTATCCGGCCTAC GAAGATGT GTAGGCCGGATAAG-CGA AGCACCATCTAAAAA  86 34
        lptD 3340832 .. 3340842 -  -8.2  -3.35813   TTCCATTTCAATTAA                 CCGC AAT GCGG                 ATTACGTGGTAAATC  65 48
        surA NONE
        pdxA NONE
        rsmA NONE
        apaG NONE
        apaH 3336355 .. 3336399 -  -5.2  -4.08767   GGTATGTTGCCAAAA CGCTTTATCAGGTCTACAA CATTAAGT TTGTAGGTCTGATA-AGCG CAGCGCCATCAGGCG  63 105
        caiT NONE
        caiA 3324843 .. 3324881 -  -3.1  -2.65894   TACAATATGCACAAT  CCGTAG-GCCCGGTAAGCG CAA CG-TCACCGGGCGCTTCAC  TTAGCGGTACTGTTT  42 26
        caiB 3323518 .. 3323564 -  -7.3  -3.78022   TCCACATCCACTAAA TCAGGCGTGA-GCGCTAACCGG AAAA CCGATTAGCGCATCGCGTTTAA TCCTCAACTTTGGCC  68 22
        caiC NONE
        caiD 3321000 .. 3321030 -  -9.1  -5.00884   ATGTTCCGGAAAAAA       GCCTTAAACCGCT TTGTC ATCAGTTTAAGGC       TACTGGCATCAATGG  93 34
IUJ39_RS16105 3310850 .. 3310873 -  -2.5  -4.24342   GTGCTTACTAATAAA          TGAATAAGC GTGGTG GGTTATTCA           ATATTGAACACGCCG  58 19
IUJ39_RS16100 3310038 .. 3310056 - -11.8  -3.99405   TTAATTGATTACAAA             GGGCAATA TAT TATTGCCC             TTTTGTTTTTTGTAG  93 48
        rpsT 3301532 .. 3301545 -  -9.5  -5.64274   GCAGGTATAAAAAAA               CCCGC GAAA GCGGG                TTTTTTCACAAAGCG 100 55
IUJ39_RS16020 3291832 .. 3291862 -    -4  -3.41991   TTAAAGAAAAACAAC       GCCTGTAGTCGT GTCATTA ACGTCTACAAAC       TGGGGAAATTAAGTA  50 64
IUJ39_RS16015 3290191 .. 3290225 - -16.6  -4.89477   GTTTGAATAACAAAA     CATGTTATGCGGCCGA TAA TCGACCGCATAACATT     ATGGTTTATTTACTA 100 31
IUJ39_RS16005 3287045 .. 3287059 -  -7.1  -3.63744   TTTGTGGTGAAAAGA               GCCCA CTGGT TGGGC               TTGAACAAATTTCGT  63 478
IUJ39_RS15995 3285365 .. 3285376 -  -2.2  -4.01939   GAAGGGAGAACGAAA                CCGA CCGC TCAG                 ATTCATTTTATGGGA  56 333
IUJ39_RS15925 NONE
IUJ39_RS15920 3271120 .. 3271132 -  -3.4  -3.62411   TGAAAATATTAAATA                TTGC TTAAC GCAA                ATCATTATCTCCTGC  51 259
        satP 3264703 .. 3264713 -  -2.4  -4.07568   CTTTCCGCCCGAAAA                 GCGC AAG GCGT                 GAGAATATATCGGCC  55 126
IUJ39_RS15875 3260921 .. 3260943 -  -4.2  -3.05463   AGTCCTTGCAGGTAA           TTTTCTGCGA CTT TAGCAAAAAA           ACGCCACAGAGTTGA  47 62
        yaaA 3260102 .. 3260113 -  -7.2  -3.30124   CTGTAGGCTGGATAA                GGCG GAGC CGCC                 ATCTGGCAATGTTGT  63 40
        arcA 3252902 .. 3252928 - -13.1  -3.91196   GGGAGACATATGAAA         CAGCCAGTAAG AGTAA CTTACCGGCTG         TTTTTACGGATCGGC 100 53
        robA 3249724 .. 3249754 -    -6  -4.37886   TTAGGCCGCACAAAA       CGCACGGCGGAG ATCATCG CCCAGGCGTGCG       GTTGTGATATCACCT  72 459
        yjjX 3248769 .. 3248779 -  -2.4   -3.3692   CGTGAGCTTAAAAAT                 GAGC TGG GCGC                 CGGGATCGCGACGAT  45 226
        ettA 3244194 .. 3244213 -    -5   -4.4891   CCGACTACGATAAAA            TCGCGC-TG GGC CATGCGCAA            TATATTGATTTTGCA  70 461
IUJ39_RS15770 NONE
        lplA 3238641 .. 3238651 -  -2.4  -4.09685   GTTGACGCGGCAAAA                 GCGC TGG GCGT                 TGACGCGCGCGTGGG  56 394
IUJ39_RS15740 NONE
IUJ39_RS15735 3231529 .. 3231545 - -10.1   -3.6682   GGCGATGCATTTAAA              GCGGCAG GAC CTGCCAC              GAACCGGCGTGGTGC  77 436
        rsmC 3224222 .. 3224242 -  -3.1  -4.07133   CAGGCCGACAAATAA            CCTCACCGC AGG GCGGATAAG            CGCTGGTGAATTATT  57 36
IUJ39_RS15685 NONE
IUJ39_RS15680 NONE
IUJ39_RS15675 3223277 .. 3223289 -  -4.8  -3.79687   ACGTGCGAGAAAAGA                TCGC ATAAA GCGA                GGTTTTGTTGTTTTT  59 460
IUJ39_RS15665 3222053 .. 3222063 -  -2.6  -2.76885   AATCTAAATGATAAT                 TATT TCC AATA                 CTATCGATAGAGATA  41 101
        fhuF NONE
IUJ39_RS15655 3220593 .. 3220603 -  -4.6  -3.30441   CAGCACCGGGTATAA                 CCCG CGC CAGG                 GCACGTTATTGACAC  52 31
IUJ39_RS15640 NONE
IUJ39_RS15635 3217255 .. 3217271 -  -5.1   -3.0371   ATAGTACCACACAGA              CCTGC AAGAACA GCAGG              AAGGCGTTCCACTGA  51 41
        dnaT NONE
        dnaC 3215631 .. 3215646 -  -4.6   -4.1711   ACGATCCTCAATAAA              CCAGGC TTAT GGCTGG               CAGGAAAATTTTTCT  64 293
        opgB 3213248 .. 3213285 - -18.7  -3.53444   GGATGTCGGCGTAAA   CGCCTTATCATGCCTAC GTTT GTAGGCATGATAAGACA    CGTCAGCATCTCCAT 100 61
        btsT 3201113 .. 3201141 -  -9.6  -3.84246   CCTGTAATGATTAAA       GCCGGATGACGGC TAGC GCCTT-ATCCGGC        CTACATTAATACACA  79 81
IUJ39_RS15570 NONE
        yjiA 3199861 .. 3199871 -    -4  -3.29511   GGCAGTTGTGGAGAA                 TATC TCG GATA                 AGAGGCATAAAGTCT  50 72
IUJ39_RS15555 3198240 .. 3198263 -   -14  -3.40522   ATTTGGTGATGAGAA          TAAAGCGGCT ATTT AGCCGCTTTA           TTGGTGTCCGAGAGC 100 154
IUJ39_RS15550 3197001 .. 3197037 -    -6  -4.30809   TAAGAGTCAGTAAAA   CTGGAAAGGCT-GGATA ATCT TATCTTAACCTCTCCAG    TAGGCGGGTATCCTG  73 46
        mdtM 3192353 .. 3192386 -  -4.5  -2.73364   AAAAACATCAGATTA     TCCTGTGCCGGATAA GCCT CTATCCGGCAGAGTG      TTTACTTCTCAGCGG  47 27
IUJ39_RS15520 3190847 .. 3190858 -  -5.8  -3.51232   TCGCTGCTAAATTAA                GGCA GGAA TGCC                 GGATTAGTGCTAAAG  57 197
IUJ39_RS15515 3189504 .. 3189520 -  -5.2   -4.7373   TGATGCCATTAAAAA              CCATAA AATAA TTATGG              TTTTTAATGGCATCT  73 144
IUJ39_RS15510 NONE
IUJ39_RS15505 NONE
        iadA 3186595 .. 3186609 -  -2.8  -3.28712   CGTCCTCTTTCAGAA               TGCC GTGACGG GGCA               GCCTGAAGTTAGCGG  46 44
        hypT 3185363 .. 3185393 -  -6.2   -3.8709   AAACGCGGCGATAAA      CCTGCGGC-GCAA GCGCTG TTGCTGCCGCAAA       TCGATAGCCTTGTTG  65 233
IUJ39_RS15470 3180993 .. 3181003 -  -3.2  -4.19506   ATGTTAACCTGAAAA                 TGCC GCC GACA                 ACGGTTCTGGTTTTT  60 267
IUJ39_RS15440 NONE
IUJ39_RS15435 3175021 .. 3175033 -  -4.1  -2.78073   ATCATCGGTAAGAAC                GATCC ACG AGATC                TTTCACAAAGTAGAT  45 232
IUJ39_RS15375 NONE
IUJ39_RS15370 3161961 .. 3161972 -  -5.8  -5.17353   ATATTTATCAAAAAA                GGCT TGCC AGCC                 TTACATCGAAAGCGA  80 26
IUJ39_RS15365 3160919 .. 3160931 -  -3.3  -2.97902   CTACTGAAGAACAAC                CTGCC AAG GCCAG                AAAAACGAATCCTAC  44 88
IUJ39_RS15360 3160533 .. 3160555 -  -7.6  -5.00616   GTTTTCTGTAAAAAA           GCCCGTAGGT TTC AACTGCGGGC           TAAATTTTCACTTGA  84 60
IUJ39_RS15320 3152433 .. 3152451 -  -8.9  -3.85114   AAATCTGACAGTAAA             GAGGCTA ATCTA TAGCCTC             TTTTTAATTTTGTTT  77 16
IUJ39_RS15300 3148287 .. 3148297 -  -5.4  -3.74251   CAGACCTGCAGCAAA                 GTCA GTT TGAC                 GCGTTGGAGCGACCG  61 182
IUJ39_RS15280 3146481 .. 3146510 -  -3.5  -4.62069   GGCCCAGCGTAAAAA       TGGCGATGATAAT GGCA ATAAACAACGCCA        CTGCTGGATTACCGA  66 125
IUJ39_RS15265 3144050 .. 3144061 -  -7.2  -3.30124   TTGTAGGCCGGATAA                GGCG TTTA CGCC                 GCCATCCGGCACATT  63 45
        pepA 3139820 .. 3139834 -  -3.6   -3.6715   CGATGCAACTCGAAA               TCCATA GGG TATAGA               ATTCTTATTGCTCGT  51 86
        holC NONE
        valS 3136351 .. 3136370 - -16.4  -4.66609   TATCTGATGCAAAAA            GGCCGGCG TAAA CGCCGGCC             CAAACCTGAATTTAT 100 59
        argF 3128456 .. 3128480 -  -6.4   -3.8647   ATTGAGCATATCAAA         GCGCATGTCGC AGCA ACGAC-CGCGC          CAGATAAGTATGACA  66 225
        arcA NONE
        arcC 3125362 .. 3125373 -  -7.2  -3.30243   ATGTAGGCCGGATAA                GGCG AAGC CGCC                 GTCCGGCAACGAATT  63 63
        argF 3124289 .. 3124317 - -13.2  -2.62184   TCTCTCCTGATATCA        CGGATATGCGCC GCGAG GGCGCATATCCT        GTGGGATTAGTCGCC  84 32
IUJ39_RS15175 3122844 .. 3122854 -  -4.6  -3.30243   AGCCATGTCGGATAA                 GACG CGT CGCC                 ATCCGGCTCGTTACA  52 36
IUJ39_RS15170 NONE
        pyrL 3121994 .. 3122011 - -12.7  -5.75342   CCTGGGCAAAAAAAA             GCCCCTC AATT GAGGGGC              TTGGGATTGGTTTTC 100 13
        pyrB NONE
        pyrI 3120495 .. 3120514 -  -2.8  -3.22298   TGCATCTATGATTAA            GGGAC-GCA GCC TGATGTCCC            GTCATTATAGGGAGC  45 64
        ridA 3120016 .. 3120044 - -13.1  -3.86015   TACTGGGCCTACAAA        TGCCGGATTAGGC GAA GCCGCATCCGGCA        CTGGCGTTTTTATCG 100 42
        treR 3115719 .. 3115731 -  -7.7  -3.17319   CGCAAGCGAGTAATA                CAGTG GCT CACTG                TGGCGATGTTGTCGC  64 222
        nrdD 3110274 .. 3110286 -  -4.7  -3.04398   TTGCTTTGCGAAAAG                CGTCG CAT CGCCG                GGCAATAATACTGTC  49 45
        nrdG 3109466 .. 3109479 -  -3.1  -4.36993   AACGGTAAAAAAACA               GTTCC GCAA GAAAC                TTGTCGACGTGTTGT  62 232
IUJ39_RS15070 3104914 .. 3104925 -  -7.2  -5.53991   TACGGAGTAAAAAAA                CGCC CGGT GGCG                 CTACGCTTACCGGCC 100 113
         fbp 3102294 .. 3102337 - -19.7  -2.57463   AACCGGTCTGATAAG GCAAAGCCGCCATCCGGCA TTTCAT TGCCCGATGGCGGCTTCAC ATTTTATCCCGCCAG 100 50
         ppa 3101554 .. 3101574 - -12.6  -5.55664   GTAGCATCAAAAAAA            GCCCCTCA TAAAG TGAGGGGC            TTCAATAAGTTATGC 100 59
        msrA 3092837 .. 3092858 -  -7.3  -4.41895   AATGTTTAATGAAAA           TCGGCTC GTAGCAGT GAGCCGA            TAAGTTCAGGGCTAG  77 115
IUJ39_RS15020 3091378 .. 3091398 - -12.5  -6.31682   AAAAGTAAAAAAAAA            CGGCTCCTG AAT CAGGGGCCG            TTGATGTTTCTGGCA 100 49
IUJ39_RS15010 3090024 .. 3090034 -  -3.2  -3.06315   CGAATATCTCCAACA                 GCTC GGC GAAC                 ATCAGACGACCTCTA  43 239
        cpdB 3087169 .. 3087186 -  -3.4  -3.92373   CAGGTGAGCGATAAA             GT-CGCC GCGCT GGCGGAC             TGGATAGAACTGAAT  55 141
IUJ39_RS14990 NONE
IUJ39_RS14985 NONE
        ytfE 3083661 .. 3083675 -  -3.5  -4.11484   GCTAAGCTGTCAAAA              CGCGCG GTAC CG-GCG               AAAGGGCTGACCTTC  60 466
IUJ39_RS14965 3080816 .. 3080843 - -14.3  -3.53224   GATCTGGTGGGTAAA        TCAGGTGAAGC GGTAAT GCTTCACCTGA         ACGAATGCGGTGTAG 100 63
        yjfY 3077516 .. 3077533 - -12.7  -5.36441   CTTTCAGAGAAAAAA             GCCCCCT GTTC AGGGGGC              AAATCAAACTATGGC 100 63
        ulaG 3071575 .. 3071592 - -12.7  -5.12707   GTAAATGGGAAAAAA             TGCCGGG TAAT CCCGGCA              TGATATCGACTCACA 100 36
        ulaR 3070301 .. 3070311 -  -2.4  -4.11692   GATTCAGGCGGAAAA                 CTGG CTG CCTG                 ACGATCGTCTGGCGG  56 456
        bsmA 3069462 .. 3069474 -  -2.7    -3.192   AAAGCAATGTAAAAC                TGACT AAA AATCA                ATCTACTGTTATTGA  45 34
        yjfN 3068619 .. 3068633 -  -3.5  -3.57144   GTCTGTACCGTGAAA               TGCCG GTGAA CAGCA               TCTGGGAAGGTTCCG  53 469
        queG 3048625 .. 3048639 -  -8.6  -3.71649   GCTCCAAATTTGAAA               GTGCTT GTT AAGCAC               AGACGCACCCAAGCG  75 382
        rsgA NONE
         asd NONE
        mscM 3041065 .. 3041077 -  -9.1  -3.30124   CCGTATGCCGGATAA                GACCC AAC GGGTC                GCATCCGGCGTTTAT  71 56
        frdA NONE
        frdB NONE
        frdC NONE
        frdD 3034687 .. 3034715 -   -14   -5.2197   CAGAAAAAGTAAAAA        CGCCTTCTTACC GGGTA GATAAGAAGGCG        GAGCAGCAACTTAGA 100 36
IUJ39_RS14700 3033702 .. 3033722 -  -3.1  -2.74792   GGACGACCTGTAAAC            GCCATTCTC ACC GGGGACGGC            CCCATTAATTATCTG  43 384
IUJ39_RS14690 3032876 .. 3032906 - -19.2  -2.80016   GCTCAGCAGTAATCA       TCAACGGTACGGCA TGG TGCCGTACCGTTAA       TCAATTCTCTTCGGG 100 22
        epmB 3030625 .. 3030651 -  -5.8  -4.22338   AGTATAATTCGAAAA         TGCAGTACTCGC TAA GCGAGTCCTAAA         ACGGACTTTTTTGAA  67 174
IUJ39_RS14670 NONE
IUJ39_RS14665 3029146 .. 3029183 -  -5.5  -4.57569   GTATCTCGCGAAAAA   TGAGAAACCTCCGGGCA GAAA TGTCTGGAGGTTTTTCT    TTTGAGCCTCTTTTT  72 488
        yjeH 3025126 .. 3025148 -  -6.4  -4.59853   CCAAGGTTTTAAAAA           CTTTTTGCTG ATG CAACAAAAAA           TGGCGGCCGGTGAGA  77 379
        aspA 3023145 .. 3023165 - -15.5  -5.46657   TATTGCAAGAAAAAA            GGCACGTCA TCG TGACGTGCC            TCTTTGGTACTACCC 100 48
        dcuA 3021740 .. 3021760 - -14.7   -2.5806   AAAGGGCGGGAGAAT            GCGAGGCGT AAT ACGCCCCGC            GGGTGAAACACTTAC  89 37
        cutA NONE
IUJ39_RS14620 NONE
IUJ39_RS14615 NONE
IUJ39_RS14610 3018730 .. 3018757 - -13.5  -5.05782   ACGGATGTCAAAAAA        CCCGGTAGTAC TTTACT GCACTACCGGG         TTTGATTAACTTACT 100 89
IUJ39_RS14605 3017366 .. 3017385 -  -8.6  -5.65927   GATGCAAATAAAAAA            GCAGATCC CCTG AGATCTGC             TTTCCTGCGTGACTC 100 51
IUJ39_RS14560 NONE
        rtsB 3004534 .. 3004555 -  -7.3  -3.80142   TATACAATATGTAAA           GCGGTGATA TGAA TATTACCGC            TTATAAAACTATTTG  68 235
IUJ39_RS14505 2985414 .. 2985443 -  -9.2  -3.14211   ATGCTTGTGTAGCAA       TCGTGCCCGCTG TCGCGC CAGCGGGCACCG        TCGGATATTACAGTT  70 33
IUJ39_RS14480 NONE
        dcuR 2977850 .. 2977871 -  -7.3  -3.07994   CGTAATTTTATTTAA           GTGTCAGGA AAAT TCCTGACAT            ATCCATTTTTTAATA  60 276
        dcuB 2976018 .. 2976046 - -14.6  -2.52759   AATAGATGTATTAAG       GCGCGCG-CCGCT CGTA AACGGGCGCGCGC        TGCTCTTACAGAAAT  89 31
        fumA NONE
IUJ39_RS14460 2973523 .. 2973535 -  -7.7  -3.44848   GCTGGTGATGAAATA                TCACC AGG GGTGA                ATTACCTGGTCGCTT  67 98
        melR 2960691 .. 2960720 -  -6.5  -3.14344   GACCCGCCGTATGAA       TGTGACGTGGGCAA GTA TTACCC-CGTCAAA       TAGGGGGTGTAAAGT  57 169
        adiA 2958266 .. 2958285 - -12.1  -5.60993   TTTTGTATAAAAAAA            GCGCGGG ATGGGG CCCGCGC             AAAAAGGTATGACAG 100 104
IUJ39_RS14395 NONE
        adiC 2955745 .. 2955759 -  -2.9  -4.61873   CGTGACAAAGTAAAA               TTAAG CAAAC CTTAA               GAACTTAATGTTGGT  65 95
        eptA 2954048 .. 2954059 -    -3  -2.93073   CGTCTTCAACAATCA                GAAT CTTC ATTC                 GCTTAGTCTCCTGCA  42 20
        pmrA NONE
        pmrB 2951980 .. 2951990 -  -8.2  -4.08064   AATCGTCCGCTAAAA                 GGCG CAA CGCC                 AGCGGCGTCGGACAT  77 344
IUJ39_RS14360 2949774 .. 2949787 -  -5.2  -2.78384   TTTTGTGGGAGGAGA               GGGC GCTCAG GCCC                GGTAAACGTAGTGTC  49 62
        yjdN 2949234 .. 2949258 - -13.5  -2.80443   GGAGATTTGATGACA          CCGCGGGAGGC TGC GCCTCCCAGGG          AGTTAGGTGGCAGGT  86 28
        phnC NONE
        phnD NONE
        phnE 2946414 .. 2946424 -  -2.6  -2.90075   GCCTCGTTAATTAGA                 TAAA GTG TTTA                 CGTAAACGTTGAGAG  42 10
        phnG NONE
        phnH 2945351 .. 2945365 -  -2.7  -2.84812   ACGTACATCAGCACA               CCTCC ACGTG GGTGG               TTCGCGGGATGGCCA  42 3
IUJ39_RS14325 NONE
        phnJ NONE
        phnK NONE
        phnL NONE
        phnM NONE
        phnN NONE
        phnO 2939780 .. 2939791 -  -2.2  -3.25088   GCTCAAACTCATCAA                TGCC TCAC AGCA                 TTTTGGTAAAGCGGA  44 18
        phnP 2938762 .. 2938784 -  -4.3  -3.42658   TATCATAAAACCGAA           TCTGTTATT TTTAG AATAACAAA           TGTGATCTGGATAAC  54 259
IUJ39_RS14285 2936655 .. 2936684 - -12.2  -3.80858   TAATATGAATTGAAA       TGCGCCCGAAGA TGATTT TCTCCGGACGCA        AGCGCCATTAATTTG  93 33
IUJ39_RS14280 2935766 .. 2935783 -  -4.1  -4.11394   AGGGCATGGCGAAAA             TGGCGACC AGC AG-CGCCA             GTAGCGCGCCGCAAA  59 445
IUJ39_RS14265 2933530 .. 2933554 -  -6.4  -4.86731   CGTGTCGAAAGAAAA          TGCCACATGA CATTT TCATGCGGCC          TGATAGCCGCCCCCC  80 16
        fdhF 2931092 .. 2931112 - -10.4  -5.64274   GTATGGATAAAAAAA            CAGCCTCC GCGAG GGAGGCCG            TTGACAGGAAAATGC 100 130
IUJ39_RS14255 2929846 .. 2929876 - -10.4  -3.37975   ACGCATTATCGAGAA       GATGGAGGCTTACG GCG CGCCAGCCTCGATC       ACCAGCTTCGTGGTG  72 492
         acs 2919538 .. 2919553 -  -3.2  -2.80816   TGGTCATTCATCACA              GAGCTC TCCA GAGGTC               CCCCTGCGTCTTTCG  43 246
IUJ39_RS14210 NONE
        actP NONE
IUJ39_RS14190 2915337 .. 2915351 -  -8.6  -3.01918   CCACGCGAGAAATCA               GCAATG AAA CATTGC               AAAAGCTGCTGCATG  62 128
        soxS 2910038 .. 2910065 - -11.2  -4.30719   TCTGGCTACAACAAA        CGCCCGCGCCTC TGAC GATACGCGGGCA         GATGCCCTACAGGCG  93 32
IUJ39_RS14155 2908995 .. 2909007 -  -9.1  -3.13899   AACTGTGCATGAACA                GCCTG TTT CAGGC                TCACCATAAAAATAT  70 319
IUJ39_RS14150 2907551 .. 2907561 -  -2.6  -5.05079   AGAAGGACATAAAAA                 TATA AAA TATA                 GACATCTAAAAAAGC  73 479
IUJ39_RS14145 2906172 .. 2906202 - -15.6   -4.3898   ATTATTTTTATAAAA       CAGGCCATATCAAT TTT ATTGATCTGGCCTG       TTTTGAATAATTCTA 100 197
        uvrA 2870925 .. 2870960 - -11.9  -3.59627   ATGAAATGGGGCAAA    TGATGCCGCTTTCCG GTGAGT CGGAAAGCGGCGTGA     AGATTATTTGAGCAT  89 29
IUJ39_RS14100 NONE
IUJ39_RS14095 2869851 .. 2869865 -  -4.2  -4.07885   CAGCCTCTCTCAAAA               CCAGCC CGG AACTGG               CAGAGTTGTTACGCC  60 214
IUJ39_RS14060 2863258 .. 2863278 - -12.6  -4.76233   GAACAAAATAAGAAA            GGGCTTCC CAGGT GGAAGCCC            AATTTCTTTGCAGAG 100 44
         zur 2857595 .. 2857614 -  -4.2  -3.65522   TATCGATGGTAATAA            GTTCTCCC CACC AGGAGTAC             AAGGATGTGCTTCCC  53 100
        plsB 2851652 .. 2851662 -  -6.8  -2.78384   CGGTGGCTTACGACA                 CGCA ATA TGCG                 ATGGTCGACAGAGAT  53 433
        malE 2845214 .. 2845234 -  -4.7  -3.96481   AAAAAATAAGGGAAA            CCGTATTAC TTG GTGATACGA            CCTTGTGCATCTTTC  59 10
        malF NONE
        malG 2842489 .. 2842506 - -12.7  -5.37345   GTGAAGCATAAAAAA             GGCGCTC CGAA GAGCGCC              GAAATACGACCATAA 100 102
        xylE 2840720 .. 2840758 -  -7.4  -2.54794   CTAAGGCGAGAATAG   GCGTCGCCACACCGTA ACGGACG TACGGCGTGGCGATAA   ATCAGCTTATTGTAT  57 32
        lysC NONE
IUJ39_RS13920 2832161 .. 2832181 -  -2.4  -4.25676   AACCAAAGCCGAAAA            CCGCAGGC ATTAA GCGTCCGG            TCGTTGCGATCGAAA  58 114
        pepE NONE
        iclR 2823029 .. 2823040 -  -7.2  -3.30124   TCGTAGGCTGGATAA                GGCG CCTG CGCC                 GCCATCCGGCAATGT  59 101
IUJ39_RS13865 2816326 .. 2816345 - -13.6   -3.5256   CAAACAAGTGAAAGA            GCCCATCC TGAC GGATGGGC             TTTTTTGCGTTTGTG 100 152
        purH NONE
        purD 2807439 .. 2807466 -  -8.4  -5.00616   CGGCGCTGGAAAAAA        CGGGCGGC AATAAAACGGAA GCCGCCCG         CCAGTTAGGGATTAC  93 71
        zraP 2803880 .. 2803901 -  -2.2  -2.57344   GAGCGCCGCCAGAAC           CACTCATC GGTAGA GGTGAGCG            TGGCATGGCTGGAGG  38 203
         rsd 2799058 .. 2799074 -  -5.1  -3.06569   TTAACGGCGTAAAAC              TCAAGCG GGA CGTTTGA              CTCTGGCGCCGTCGT  51 9
        thiC NONE
        thiE NONE
IUJ39_RS13770 NONE
        thiS NONE
        thiG NONE
        thiH 2793377 .. 2793400 -  -8.8  -6.14618   GACAAAATAAAAAAA          CGGGAGGTCG ATAA CAATCTCCCG           TTTTTCACATTACGT 100 80
IUJ39_RS13650 2773501 .. 2773516 -  -6.8  -3.18582   CAGTTCAGCGATGAA              CCAGGG CCAT CCCTGA               CATGTAACGGCACGT  59 174
        coaA 2772479 .. 2772496 - -11.3  -5.27779   CCGAATAGTAAAAAA             GGGGAGT CGGT ACTCCCC              TTTTTTCTGTTATTT 100 35
        trmA 2760313 .. 2760324 -  -7.2  -3.30441   GAGTAGGCCGGATAA                GGCG TTTA CGCC                 GCCTCGCCGTATGCC  63 82
        sthA 2757647 .. 2757658 -  -5.8  -2.52516   GCCGTTATGAGCAAC                TGGC AGAG GCCA                 TCCGCGGTGCAATGG  49 61
        argE 2751722 .. 2751740 -  -7.4  -3.85698   GCCGTCTTTTATAAA             GCCACG TAAAACC CGTGGC             GTCAATTACTGCGAA  68 211
         ppc 2748804 .. 2748816 -  -6.3   -4.0056   AGAAAGATTTATAAA                TGCAT AAA ATGCA                GACAGGAATATATTG  66 115
IUJ39_RS13545 2746807 .. 2746831 -  -2.1  -3.49777   CGTGATACATGATAA          TCCCCTGCC GATCGCA AACAGAGGA          AACAGTAACGTCGAA  47 156
IUJ39_RS13540 2745821 .. 2745836 -  -3.3  -2.83522   ATGCGCTGAGTAAAG              TGTGA TTCACT TCACA               AGTTGGCGTTATTTA  43 154
         fsa NONE
IUJ39_RS13530 2743893 .. 2743912 - -10.7  -5.41143   CACCGGGCAAAAAAA            TCCCCGC GCGATT GCGGGGA             TTTTTCATTGCAAGC 100 46
        metJ 2732770 .. 2732811 - -19.7  -3.16564   CTGTGAGTTCATGAA CAGATAAGAAGAGGTGGAA GCAA TCCCGCCTCTTCTTATCTG  TGTGAGCGGTGGGGG 100 122
        priA 2727553 .. 2727563 -  -2.6    -3.494   GAAGCGGTTACAGAA                 TTTT CAT AAAA                 AGTGTGATGGATCTT  48 72
        cytR NONE
        ftsN 2725300 .. 2725329 - -11.5  -3.43676   GTTATTAATGCAGAA       TTCCGGCCCCGTAC TGC GTACGGGG-CGTAA       TGCAAGTATAGATGG  85 58
        hslV NONE
        hslU 2723351 .. 2723368 - -11.3  -5.07486   TAGCGCCAATAAAAA             TGGGGCT TTTC AGCCCCA              TCAACAGTGATGAAA 100 56
        menA 2722378 .. 2722392 -  -5.8  -3.08032   CTGTTGGCAAAATCA               TCAATT GTT AATTGA               TATTTGTCAGTTAAA  52 36
        rraA 2721801 .. 2721816 - -11.8   -5.3236   ACAACGCATAAAAAA              GGCGCC TTAC GGCGCC               TTTTTTGATCACTCG 100 34
IUJ39_RS13430 NONE
        glpK 2718548 .. 2718587 - -13.6  -2.98823   GCCCCCGCACACAGA  GTTTGCCGGATAAGACGC ATTA GCGTCTTATCCGGCATGG   CAACCTTACTTGTCG  87 31
        glpX 2717402 .. 2717423 - -10.9  -2.74122   CTTCAGGAGAAAGAT           TTCCAGCCC CGTG AGGCTGGAA            GGCTCTAACTAACAA  74 46
         fpr 2716515 .. 2716543 -  -6.6  -2.73124   TGTCACCTGGTAAAT       TGCCCGGT-GGCG CTGG CGCTTACCGGGCC        TGCGGATTGATGATG  55 83
IUJ39_RS13405 NONE
        tpiA 2714434 .. 2714473 -  -5.5  -3.59262   TGGGATACTGGTAAA  GCGAGAGTGACGGGAGG AGAGCG CCTCCCGTCGCGACAGC   TTAAGCCTGTTTAGC  59 26
        cpxR 2704581 .. 2704595 -  -2.8  -3.53091   ATGCGCGCGGTTAAA               CTTCCT ATC ATGAAG               CGGAAACCATCAGAT  48 18
        cpxA 2703170 .. 2703213 -  -7.5  -4.26076   GTACTGCTATGAAAA CCGTAG-GCCGGATAA-GGCG TTTA CGCCGCTATTCGGCGCCACGA TTCATTACGAACGTT  74 30
        rhaT 2696586 .. 2696619 - -10.3  -3.55444   TGTTCACGCGGGAAA     CCGGGATGACGCC GAGCCAAT GGCGTCATCTCAG      TAATCAGAGTGATTA  77 38
        rhaB NONE
        rhaA 2691676 .. 2691723 -  -8.7  -3.86897   TGTAGGCCGGATAAA CGTTGCGCCATCCGGCAAT GGTGTTTCGTTT ATTGCCGGATGGCG--ACG CTGACGCGCCTTATC  76 61
        rhaD 2690727 .. 2690743 -  -2.3  -3.96291   CATAAAGCTCATAAA              CATTCTC CTT GAAAATA              GATCCCTGTAGGCTG  53 74
        fucO NONE
        rhaM 2688893 .. 2688910 -  -3.3  -5.28176   CGCAGGTACAAAAAA             CGCAGGTG ATT CGCC-GCG             GGGAAGGCACCAAAG  82 379
IUJ39_RS13270 NONE
IUJ39_RS13265 2687551 .. 2687581 -  -3.5  -2.85606   CTATACAGCATTATA      TAACCCTG--ATGAA TTT TCCATGTCAGGGTTA      CGATAGGTTCAATGT  44 34
IUJ39_RS13260 2686452 .. 2686477 -  -5.4  -3.37464   TGACGAACGGGATAA         GCATCGAGCCG AGCAG CGGCT-GAAGC         GCTTTGCCGAGACGG  56 507
IUJ39_RS13220 2683539 .. 2683553 -  -4.3  -3.60737   GAGAAAGATTAAAGA               GAAGA GGTCA TCTTC               AATCTACCTGTAAGT  55 224
IUJ39_RS13215 2682812 .. 2682826 -  -2.9  -3.62354   GGGTGAAATGAAATA               TATCT TCATT AGATA               AGATTATCACTCTAT  50 78
IUJ39_RS13210 NONE
IUJ39_RS13205 2679043 .. 2679059 -    -3  -4.62069   GTTTTATTTCAAAAA              GGAATA TGGTT TATCCC              CTCTAAAGATGCGTA  68 297
        fdnG NONE
        fdoH NONE
        fdoI NONE
        fdhE 2664687 .. 2664701 -  -5.6  -4.82901   GCGGCCTGAGAAAAA               TGCGCT GGG AGCGCG               AGGCAAAGGAAAGCG  76 517
IUJ39_RS13145 2663016 .. 2663030 -  -5.6  -3.44794   AATTTATTACCACAA               TGCCGG AAA CCGGTA               ATCAAAATCCGCATC  56 407
        yihU NONE
        yihT 2656619 .. 2656631 -  -3.3  -3.14564   TCATCCTCGTATTAA                CGACG TTT CGCCA                TCATTTCATCGACGA  46 9
        yihS NONE
IUJ39_RS13095 NONE
IUJ39_RS13090 NONE
IUJ39_RS13085 2650959 .. 2650972 -  -9.5  -4.08064   AATCGCCTCTCAAAA               CGCCC GGCA GGGCG                TTATATTTTATTGTT  81 42
        ompL 2648728 .. 2648746 - -14.6  -5.14563   TCCGGCACCAAAAAA             GCCGCTGA AAT TCAGCGGC             TTTTTAATACATTCG 100 42
        glnA 2644903 .. 2644920 - -11.3  -5.28176   TTGATGGAGAAAAAA             GCCCATC GTGC GATGGGC              TACAGATGAATAGCA 100 187
        glnL NONE
        glnG 2642297 .. 2642307 -  -6.8  -2.94739   AAGTGCAAAATAGCA                 GCGT TTT ACGC                 TCAATTATTAATCTT  56 59
IUJ39_RS13050 2642076 .. 2642115 - -19.4  -3.12036   ATATAGTACGGAATA  GGGTAGGCCGGATAA-GGC GAA GCCACCACCCGGCCTACCC  GCTAGCTGAACAGCT 100 27
        yihA 2638334 .. 2638349 -  -7.6  -2.77781   CGGTATCAAAACGTA              TCCATC AGTT GATGGA               AAACTGTACGCGTAT  57 453
IUJ39_RS13020 2634331 .. 2634355 - -14.3   -5.8096   GATAAAAAATAAAAA          GAACGCCGGTC ACT GACCGGCGTTT          TTACAAGATGTTTTA 100 10
        mobA NONE
        mobB 2631165 .. 2631196 - -15.8  -3.06129   AGAACAGCACACATA      GCCCGGAGCAGGCG TTTA CGCCCACTCCGGGG       CGGCAGTTAACCCTA 100 9
        fadB NONE
        fadA 2617771 .. 2617789 -  -9.5  -5.31456   TTAAGCCATAAAAAA             CCCGCCC CTGAC AGGCGGG             AAGAACGGCAACTAA 100 181
        rfaH 2614676 .. 2614688 -  -4.7  -2.74263   ACCTTACGCCGAAAC                CGACG TCA CGACG                CAACGAGCCCGCTTA  46 157
IUJ39_RS12880 2605607 .. 2605625 -    -6  -2.72043   AATGCTGCGGTAAAG             CATAGCTA GCG TGGCTATG             ACGCTTTGTTGGGCC  53 88
        metR 2600297 .. 2600319 -  -5.5  -2.72344   CTTTATGTGGAACTA          CGGC-GCCAC CCAG GTGGATGCCG           GAACGCTGGGCATTA  50 119
        rhtB 2596750 .. 2596767 -  -3.3  -3.28712   GTTCGTCGGCGATAA             CGTCGGCG CTG CGGCG-CG             CTGGGGTATTTTCGC  47 240
IUJ39_RS12825 NONE
        rarD 2591848 .. 2591899 -  -9.6  -2.54617   GAGGTTAAAAAGCAG GCGCTACGCCTTATCAGGCCTAC GGAATTT ATAGGCCTGATAAG-CAAACCGC AATCACAATCCTTTA  68 28
IUJ39_RS12815 NONE
IUJ39_RS12810 NONE
        cyaY 2582697 .. 2582713 -  -2.1  -3.30124   CGGTAGGCCCGATAA              GCGCAGC GCT ACCGGGC              AATAAAGCACTTAGC  45 36
        hemC NONE
        hemD NONE
        hemX 2576813 .. 2576841 -  -2.5   -4.3587   GAGCAACAACACAAA        GAGCAATAATACT TTT AGCATCATTATTC        TCCTTGCGGCGCGGC  60 20
        hemY 2575335 .. 2575351 -  -2.2  -3.35046   TTAGCGGTGCAAAGA              TGGCAC GTTAT GTGCAA              TAATATACGGGTAGA  45 311
        rhlB NONE
        gppA 2554936 .. 2554946 -  -6.8  -3.66178   CTGGCGAATCTGAAA                 GCCA TGA TGGC                 GGCAAAGCGAGCGAA  64 63
        ppiC 2550138 .. 2550161 - -13.9  -5.43866   CAACCGGCAAAAAAA          GCCCGGAGT TGGAAC ACTCCGGGC           TTTTTATTAGTTACG 100 32
        ilvY 2547568 .. 2547579 -  -7.2  -3.30124   TCGTAGGCCGGATAA                GGCG TTTA CGCC                 GCCATCCGGCATTAG  63 37
IUJ39_RS12555 2539065 .. 2539077 -  -6.2  -5.15167   GACGATTAATAAAAA                GGGC GTAAT GCCC                TTTTTTTACGCCAAC  83 31
        hdfR 2537680 .. 2537699 - -10.8  -4.06419   CCCTGCCAGAAATAA            TCCTTAGC AGAT GCTAAGGA             TTTTTTTTGCCTAAA  86 91
IUJ39_RS12510 NONE
        mdtD 2529296 .. 2529308 -  -3.3  -3.72576   CGGGCGGCGATGAAA                CGAGC AAG GCTGG                CTATTCCGAAAGGCT  53 359
        ravA NONE
        viaA 2518283 .. 2518301 - -10.2  -2.71712   GTTGCGCGGCGAAAT             GCCGCAGA CCA TCGGCGGC             GGGATTGGCCAGTCG  67 144
        asnC 2516808 .. 2516819 -  -7.2  -5.14563   TGTGGGATTAAAAAA                GCCG CTCA CGGC                 CTTATAGTACGCATG  86 19
        mioC 2516173 .. 2516188 -    -4  -3.44672   TGGGATCAAAACAGA              GAGTTA TGCA CAACTC               AAAAAGTGAGCAACG  52 118
        mnmG 2514018 .. 2514029 -  -3.6  -3.40371   TATTCGATGAATTAA                GCGC TACG ACGC                 AGCATACCTTGTTTT  48 10
        rsmG 2513184 .. 2513200 -  -3.7  -3.60792   GTTGTAATGTTGAAA              CGAAACC GTA AATTTCG              AGTTAAATGTAACAA  53 114
        atpI NONE
        atpB NONE
        atpE 2511177 .. 2511189 -  -3.3   -3.4052   TCTTAATTCAAGCAA                CGCTT ACT ACGCG                ACAGCGAACATCACG  48 19
        atpF NONE
        atpH NONE
        atpA NONE
        atpG 2507629 .. 2507639 -    -4  -3.73968   AAATCCTCTACGAAA                 TAAC CTG GTTA                 AACCGCGGCGGCCCC  55 23
        atpD NONE
IUJ39_RS12390 2505747 .. 2505766 -   -10     -6.13   ACAGGTAAAAAAAAA            CCAGCCTG AGAT CAGACTGG             TTTTATGCTTTCAAG 100 47
        glmU 2503924 .. 2503936 -  -6.9  -3.02263   ATACTGTGGGTAATA                CCCGA ATT CCGGG                CACCCCGAGCCTTGT  58 199
        glmS 2501954 .. 2501973 - -10.6  -5.20154   AGACAATGCAAAAAA            TGCCCCGC TTCT GCGGGGCC             TTGAGGGTGTTACTC 100 35
        pstS 2500633 .. 2500648 -  -2.5  -3.29558   GAATACTAATTAATA              CAACG CATTAC CGCTG               TTGTCTTTTATGCTG  46 4
        pstC NONE
        pstA 2498620 .. 2498634 -  -8.5  -3.30124   CGGTAGGCCGGATAA               GGCGG TTACG CCGCC               ATCCGGCAATTTAAA  69 43
        pstB NONE
        phoU 2497007 .. 2497035 -  -7.4  -4.64763   CCACTGAAAAAACAA       GGGCGGATAAGCG TTAG CGCC-ATCCGCCA        CAAACATCACTCTTT  82 32
        adeP 2494497 .. 2494516 -    -5  -2.74144   CCGCTAGCCGGAAAG            CCGGTGCTG ATC CAG-ACCAG            TTCCATGGGCGCCAT  46 336
        dnaA NONE
        dnaN NONE
        recF NONE
        gyrB 2480162 .. 2480179 -  -9.9  -4.86033   AAAGGGGGATAAAAA             GGGGAAT CGCG ATTCCCC              TTTTGTCGATCGGTT  91 136
        yidA 2479182 .. 2479198 -  -9.4  -5.82281   AAAGACATAAAAAAA              CCCGCA GCAAG TGCGGG              CCATTAAGCGCGTAT 100 87
IUJ39_RS12265 2476831 .. 2476843 -  -7.7  -2.87881   TAATGTCTGTATATA                GTCCA TAT TGGAC                TGAAGTAGACCATAT  61 350
IUJ39_RS12260 2475726 .. 2475742 -  -6.6  -2.57211   ATCCTTTTTTATAAT              CGCATT TTTAT AATGCG              CATTACAAAAACCCC  55 495
        torT 2471507 .. 2471553 -  -8.6  -3.18681   TCTGAACGTGATGAA CCACACGCTGGAGCATAACGGT GAA ACCATTAAGCTTACGCGCGCGG AGTACGAGCTGCTGC  63 207
        torC NONE
        torA NONE
        torD 2466483 .. 2466493 -  -3.2  -4.39414   AATACTAAATACAAA                 CCCA TCG TGGA                 TATTGATTGGTATCA  62 121
IUJ39_RS12220 NONE
        ccmA NONE
        ccmB 2463714 .. 2463740 -  -5.2  -2.57298   AAACGAATGAAAACC        GCGCTACTGCA GACTGA TGC-GTAACGC         TGCCGCCGTCGCAAA  48 2
IUJ39_RS12205 2462930 .. 2462944 -  -2.1  -2.80796   CTCCACGATGCAAAT              GCC-GT ACTC ACTGGC               GCCCCCTTTTCAGTA  40 18
        ccmD NONE
        ccmE NONE
IUJ39_RS12190 NONE
        dsbE NONE
IUJ39_RS12180 2458701 .. 2458726 -    -9  -3.14931   TGCAGGGTTTATCAA         GGCCCGGTAA GCCGCG TCACCGGACC          GTCAGGGCATTATTT  70 35
IUJ39_RS12175 2457160 .. 2457171 -  -2.2  -4.11235   TAACGATGAGACAAA                CTGG GGCA CCAA                 ATCGTTGGCCATCCT  56 196
        ibpA 2456259 .. 2456275 - -15.1  -2.80113   GAGCATGGGATGACA              GGCCGCG CAA CGCGGCC              CGACGGAATTAGTTA  89 34
        ibpB 2455710 .. 2455731 - -13.7    -5.252   TACGCGCACAAAAAA           GCCCCACCA TCTC TGGCGGGGC            AAGGCAAGGAGCTAA 100 41
IUJ39_RS12145 2452234 .. 2452249 -    -6  -3.33162   CACGCCAGCCTACAA              CGGCGC TGGA GCGTCG               CGGAAATGGCAGCGG  56 313
IUJ39_RS12135 NONE
IUJ39_RS12130 2447950 .. 2447960 -  -8.2  -4.07687   ATTGCCGGCTTAAAA                 GGGG AGA CCCC                 CTCCGTGGCCGCGCA  74 332
IUJ39_RS12120 NONE
IUJ39_RS12115 NONE
IUJ39_RS12110 2446413 .. 2446424 -  -5.8  -3.54424   GCTCAGTGCCGGAAA                GACG GCAG CGTC                 ATCCGGCACATTAGC  57 50
IUJ39_RS12100 2443302 .. 2443319 -  -5.5  -3.24924   TCGCCAGCTATAAGA             CGCTGTT TGGC AACGGCG              CATTTAACTGTTACC  54 515
        ivbL 2440746 .. 2440770 - -10.7  -4.98531   GTCTTAAACGAAAAA         CCCCGCCCGG TTTGCG CCG-GCGGGG          TTTTGGAATCGTGTG 100 53
        ilvB NONE
        ilvN 2438700 .. 2438714 -  -3.6  -2.74144   GCCTGATTCGGAAAG               TGAATA ATT TACTCA               AAAAAGACGGCAATT  43 19
        rbsK NONE
        fucP NONE
IUJ39_RS12045 2434257 .. 2434281 - -12.2  -5.76949   GATGGGTAAAAAAAA          CGCGCTTACC TTAAC GATAAGCGCG          CGGCTGTTCAAGCCT 100 48
        uhpA NONE
        uhpB 2432147 .. 2432159 -  -5.5  -3.27525   CTTCCTTAAACGTAA                CGCTG GGG CAACG                AGACGCTTATCCGCG  54 3
IUJ39_RS12030 2430720 .. 2430735 -  -4.6  -3.87956   AAAATCCACAGGAAA              GCTGGC CTGC GACAGC               GTCCAGGCAAAACCG  59 89
        uhpT 2429223 .. 2429241 - -13.1  -5.37345   GCGAAGCATAAAAAA             GCCCGGC GTTAA GCCGGGC             AAAACGTTACCAAAT 100 49
IUJ39_RS12020 2428564 .. 2428586 - -15.6  -2.83012   AAGCGCAGCACCATA           CGGCAGGCAA ACG TTGCCCGCCG           CCCCTGCCAACCTCA  93 90
IUJ39_RS12005 2426559 .. 2426573 -  -9.2  -3.72893   TACTGCCGGATGAAA               GGCCGC AAT GCAGCC               TTTTAAGGCTTTATC  77 87
IUJ39_RS11990 2424319 .. 2424331 -    -2  -4.46854   CCATGGAATAATAAA                TTCA CGGTT TGAA                GGTGAATGCCCTGGG  61 170
        mgtA NONE
        mgtR 2421285 .. 2421305 -  -8.3  -3.63627   GCTTCACATGGCAAA            CACCGCT TTTGTTT AGCGGTG            TTTGCCAGTGCGCGT  72 139
        cigR 2420498 .. 2420518 -  -2.5   -3.5393   ATTATTTTTCTGAAA            GACTCCCCA AAG TAGAGACTC            GTTCTGGTAACCCTT  48 212
IUJ39_RS11965 NONE
        yicI 2416321 .. 2416343 -  -7.7    -4.946   ACTAAACATGAAAAA           GCCCACC TTATACCGG GGTGGGC           TTTTTGCGATCCGTT  87 64
        gltS 2405572 .. 2405612 -  -4.5  -4.21908   GATGATTATTGAAAA  CCCGGAGCGGCTGGGACTG GCG CAGTTACACCAGCTCAGAG  GACGCGTTGGCCGTG  64 396
        ligB 2397908 .. 2397921 -  -8.1  -2.59534   ATGAAGGACACTAAG               TCCCG AATC CGGGA                ATATGCTGAGCAGCC  59 7
IUJ39_RS11895 2394973 .. 2394991 -  -6.7  -5.45652   ATCCTGAAGAAAAAA            GA-GGCGG TAGG CCGCCGTC             TGGACTTCATGATGC  95 215
         rph 2393402 .. 2393419 -  -9.1  -5.96219   CACGGACAAAAAAAA             GGCGACC TCTC AGTCGCC              TTAAAATCAATTTTC 100 32
        pyrE 2392565 .. 2392579 -  -7.8  -3.46783   TAGCGAATTTAAATA               CCGTCC AAC GGACGA               TTTCGATGCCCGCTG  64 152
        radC 2389395 .. 2389408 -  -6.7   -4.2074   TCCCGAACAGACAAA               GATCC CGAT GGATC                GCCCAAAGTACCTTA  72 38
        rpmB NONE
        rpmG 2388741 .. 2388756 -  -8.2  -5.86976   CCAGAAAACAAAAAA              CCCCGC CGAA GCGAGG               TTTTTGTTACATCAA 100 49
        mutM 2387772 .. 2387801 -  -4.3  -3.90744   TCGCTGGTCAAAGAA       GTGGCGCGACATCA GGG CGATGTGAC-CCAC       TTTCTACCGGACAAT  60 97
IUJ39_RS11830 NONE
        rfaQ NONE
IUJ39_RS11820 NONE
        rfaP 2382689 .. 2382699 -  -2.6  -2.53921   ATTATAAATACAGAG                 TTTA TAT TAAA                 GATTTTTCCTTATTG  40 21
IUJ39_RS11810 NONE
        waaB NONE
        waaO NONE
        rfaJ NONE
        rfaY NONE
        waaZ 2376435 .. 2376479 - -19.7  -4.67607   GCGCTAAGAAATAAA TAAGAAAACGCGCTGATACC TTTCAC GGTATCAGCGCGTTTTCT-A TCGTCAGTATTAAAT 100 372
         kbl NONE
         tdh 2369739 .. 2369759 -    -9   -5.4505   TTCCCTAATAAAAAA            GGTTGGCG AATGA CACCAACC            TTTTACGATGAAACG 100 81
IUJ39_RS11745 2368356 .. 2368368 -  -3.3  -5.09426   TGCAAGCCGAAAAAA                CCGCT GCA ACCGG                TCTACGCTACACGCT  77 146
IUJ39_RS11725 2364013 .. 2364031 -  -3.9  -3.13504   GCGTCATGAAAACGA            CG-GGTAA TCAC TTACCGCG             CACCAGAGGCAGATT  48 14
        grxC 2363694 .. 2363708 -  -3.5  -3.14878   CGCCTTAACGCAACA               GCGGA TCCAG TCCAC               CACGCGCATCCAGCG  46 0
        secB NONE
        gpsA 2362100 .. 2362129 - -14.4  -4.53303   CAGGCGGACAGAAAA       CGA-CCAACCCGC TCTGT GCGGGTTGGGTCG       TTTATGCAAACAGTT 100 49
        cysE 2360835 .. 2360848 -  -5.9  -3.96148   TGCGTTGACGACAAA               GGGCA CGCC CGCCC                ATAGCGCCGTAAGCT  65 431
IUJ39_RS11675 2355385 .. 2355395 -  -4.6  -3.34398   GGTGTTTCGCAAAGA                 CGAC TAT GCCG                 TGAAATACGCTGTGG  51 409
IUJ39_RS11650 2349485 .. 2349499 -  -2.8    -3.492   AAAGTAAGCCAAATA               GGGA GAAAACA TCCC               GGTTCGATTAAGCAG  48 33
IUJ39_RS11640 NONE
IUJ39_RS11635 NONE
IUJ39_RS11630 NONE
IUJ39_RS11625 NONE
IUJ39_RS11620 2343343 .. 2343363 -  -2.5  -3.12663   ATCAGCATCGAAAAT            GCTGTAC GTCGCCA GGACAGC            TCGGTACGTTCAGGC  43 72
IUJ39_RS11615 2343085 .. 2343107 -  -8.5  -4.21644   AAAAATTAAACGAAA           CCTTACCCA GCAGG TGAGTAAGG           GTCTTCAGCAAGTAT  80 44
IUJ39_RS11610 NONE
        selA NONE
        selB 2339013 .. 2339051 - -13.4  -4.94222   AAGAAGCCAGAAAAA   TAAAAAGCACATCAGG TTCATTC CCTGATGTGCTTTATA   TAAATCAACCCAATA 100 77
        yiaY 2337671 .. 2337688 -  -4.1  -4.25104   GCTGGCGCAGCAAAA             GCTCAAC CGAA GCTAAGC              TAAAGTGTTTACGCC  62 102
        aldB 2335059 .. 2335093 -  -8.6  -2.63102   AGCACTGTTATACCA    GCTAT-CTGCCGGGC GCTACT GCCCGGCAGGAGAAC     ACCATTAAAACAGTC  63 30
IUJ39_RS11575 2334255 .. 2334265 -    -4  -4.56775   AGGCGGGGGTAAAAA                 TTCT GGC AGAA                 GAGATAGAATGCGCC  67 92
IUJ39_RS11560 2331089 .. 2331106 -  -5.5  -3.76492   TGTAAGGGCATTAAA             GTCGAGC AGGT GCTGGAC              GCGGTTGGGATTTCA  61 348
        xylA 2328419 .. 2328446 -  -9.8  -2.78679   TTCCTTTACTGAAAG        CGCCCGGC-AGCG CTA CGCTTACCGGGCT        ATCAACCACCACTGG  69 74
        xylB 2326908 .. 2326933 - -10.5  -4.83593   AATAATTATGAAAAA         TGCCTTTCAGC CAAA ACCGAAAGGCA          TTCTGACTTATGACA  91 33
IUJ39_RS11540 2326398 .. 2326415 -  -9.9  -3.03829   TCAGCTAAACAACGA             TGATGGC TCCG GCCATCA              TGCATCATCACTATA  71 23
IUJ39_RS11530 2324906 .. 2324917 -  -5.8  -2.78463   ATTCGCGGTATCACA                CCTC ACCA GAGG                 CGGCTTTTACCGCAT  50 32
        glyQ NONE
        glyS 2321757 .. 2321772 -  -6.8  -6.20267   TTAAAAATAAAAAAA              CCTGCC CGAA AGCAGG               TTTTTGTTTAATTAA 100 49
IUJ39_RS11500 2319051 .. 2319084 - -16.8   -2.9155   CGGGTTAATACTACA     GGCCCGATAAGCGC TGGCTT GCGCTTATCGGGCA      GAGTGTCATTACTGG 100 34
IUJ39_RS11485 2314872 .. 2314883 -    -3  -3.01915   CCGGGAGAAAAACAT                GATT CGCA AATC                 CCAGAGTGAGGACAT  43 421
IUJ39_RS11470 2313312 .. 2313335 -  -6.8  -3.91144   TGCAGATGTGAGAAA          GTCTAC-CAGC GCG GCTAAGTAGAC          CACAGGAAGCGCAAA  68 140
        eptB 2311496 .. 2311506 -  -5.4  -3.65542   CTTAGTCGCAAAATA                 CGAT TTA ATCG                 GCGAGAAAGTCGGCA  59 47
IUJ39_RS11460 2311331 .. 2311349 - -14.6  -5.33848   ACTACAACGAAAAAA             CCCTGCTC ACT GAGCAGGG             TTTCTGAATTTGGTC 100 36
IUJ39_RS11455 2308991 .. 2309023 -  -3.4  -2.92668   GAGGAGCGAAGCATA     GTTG-CCGGAT-GGCG CTA CGCTTATCCGGTCGAC     AAAGGCCGGGGCGTA  44 53
        dppB NONE
        dppC NONE
        dppD NONE
        dppF 2304925 .. 2304949 - -17.3  -3.68506   GAATAGCGACGGAAA          GAAGACCGGAA TGG TTCCGGTCTTC          TTCGGGAATTACAGT 100 34
IUJ39_RS11420 2302787 .. 2302826 - -18.6  -3.73775   CTTACCCGCAGTAAA  CCGAAAAAGGCCGCAAGG TTTC CCCTGCGGCCTGGTTCGG   GCGCATGTTGCCATT 100 66
        bcsR 2298900 .. 2298913 -  -2.3  -2.61681   CTGCAATCCCAGAAT               CGCCA TTCA TGGCT                TCCTTAATGTTGTTG  39 29
        bcsQ 2298147 .. 2298167 -  -4.5  -3.57792   GCAGCCACCGGGAAA            GGGCGCTCA TAA CGGGCTCCC            GGCGGACGTTTTGTC  55 11
        bcsA NONE
        bcsB NONE
        bcsZ NONE
        bcsC 2288539 .. 2288552 -  -9.5  -2.95409   TAACGATTAATTATA               GCGCC TGAT GGCGC                TGCGCTTATCGATGC  70 63
        hmsP NONE
        dctA 2284940 .. 2284965 - -12.6  -3.37259   AATTATGCGCAAACA         CCCGCAGTCC TGGAAG GGACTACGGG          CATAAGTGGCGAGAT  90 40
IUJ39_RS11360 2283224 .. 2283268 -  -9.4  -2.78018   ATGCCGCAGTAAGTA TTTGCTTT-TGCCCGGTG-GCG CTG CGCTCCCCGGGCATAAAACAAC AGGTTACTGCGCTGT  69 29
        pdeH 2281248 .. 2281294 -    -5  -3.30658   CCAGACGAAAAAGGA GGATGACCGCGCCTCGTAATAC CAC GTATTACGGGGAACAGTCTGGC GTTACAGGGTCAGAA  54 27
IUJ39_RS11345 2279089 .. 2279101 -  -9.1  -3.30243   ACGTAGGCCGGATAA                GACGC TTT GCGTC                GCCATCCAGCGATAC  71 49
IUJ39_RS11325 2273862 .. 2273882 -  -5.3  -3.72695   ATCGCGTTTATTAAA            CAGGGGCAG GGT CTGTCGCTG            GAAAAGTATCGCGAC  61 316
IUJ39_RS11315 2271570 .. 2271584 -  -7.1  -3.27476   ATGGCGAATCATGAA               CAGGC CGACC GCCTG               GCAAATGTGGTACGC  59 383
IUJ39_RS11305 2269176 .. 2269200 - -11.5  -6.07969   GAAAACCAAAAAAAA          TCGGGATCC GCGATCT GGATCCCGA          TTCAGCCTGCTCTCC 100 59
        fraB NONE
        fraD NONE
IUJ39_RS11290 NONE
        fraE 2264654 .. 2264689 - -12.6  -3.03441   GACCATGCGTTAATA    TCTTGTGCGCCCA-CCT TAA AGGATGGGCGCACAGGC    CTTCATGATTAATAC  83 34
IUJ39_RS11270 NONE
        prlC NONE
        rsmJ 2257621 .. 2257632 -  -5.8  -2.76696   TTTGCCGGTAATAAC                GCTG CTGC CAGC                 CTGCTCAAAGTCACG  51 281
IUJ39_RS11250 2255851 .. 2255896 - -11.9  -3.65351   GGATGGCGACGCAAA GCGCCTTATCCGGCCTACAGGC ACC GATCGTAGGCCCGATAAG-CGC AGCGCCATCCGGCAT  89 51
        uspB 2252840 .. 2252861 - -11.5  -2.73875   GCTTGTCTAACACGA           GCGGGCCAG GAAA CTGGCCAGC            TTTTTTGTTCAGTGC  77 34
IUJ39_RS11225 2249574 .. 2249584 -  -6.8  -3.86194   AATGCGTGTCACAAA                 GTCC GCC GGAC                 ACGCGCTCAGCGGAG  68 268
        tusA 2243950 .. 2243982 -  -3.4  -4.70659   TTCCACATCCAAAAA     CAGCCGCGTC-GTGA GGCA TCACCGACGCCGTTA      AGCAAGGGCTTAACG  68 106
IUJ39_RS11165 2238390 .. 2238428 -  -4.5   -4.1196   AAGCGAGGTGGAAAA  CGGTCTGCCGCCC-GTTC CGGC GAACTGGGCATTATACCG   TGAAAAGGTGGCCGG  62 379
        ftsY NONE
        ftsE NONE
        ftsX 2234515 .. 2234557 - -10.6  -2.66335   GTAAGAGACAACTGA GACTCTTTCCCTGCAAACGG AAG CCCATTGCAGGGAAAGATTA TACCACGCTTTTATC  74 39
        rpoH 2233421 .. 2233454 - -11.1  -4.91511   AGGGGATGACAAAAA     CAAAAAACCCCGGAT TTAC ATCCAGGGTTTTACG      GGTCGCGAAGGGGAA 100 42
IUJ39_RS11130 2232069 .. 2232101 -  -7.7  -5.06103   AGAAGCGCTAAAAAA      GCTGGATGGCG GCTACTGAATG CGCCATCCGGC      AAACCACTATTTGGC  87 32
        livK NONE
        livH NONE
        livM 2227881 .. 2227894 -  -3.1  -2.78867   TTAACCGTTAATAAT               GGC-TG ACT CATGCC               TGCTCTCCTTTCGCC  43 19
        livG NONE
        livF 2226189 .. 2226215 -  -2.4  -5.04175   CGAATGACAGAAAAA         TAACTTTTTTAT TAC AAAAAAAAGATA         GTAAGCAGTCAGGGA  71 219
        ugpB 2224704 .. 2224716 - -10.5  -3.01712   TGTGTTTCCTGAACA                GCGCC GGC GGCGC                TCTGCTTATCCGGAC  73 92
        ugpA NONE
        ugpE NONE
IUJ39_RS11080 NONE
        ugpQ 2221100 .. 2221130 - -12.6  -3.29043   AATGTCGCCGCAGAA       CAGCGGAACGCC GCAACCT GGCATCCCGCTG       AAAACCATCAGTCCT  90 40
         ggt 2218436 .. 2218451 - -10.4  -5.91981   AAAACCCAAAAAAAA              GCCAGC AAAA GCTGGC               TAAAGTAATACTGGA 100 437
IUJ39_RS11060 NONE
IUJ39_RS11055 2216208 .. 2216220 -  -5.5    -2.954   GAGTGAGCGATAAAT                CTGCC GGG AGCAG                GTTTGAACGCAACTT  51 125
        gntR 2214887 .. 2214898 -  -3.6  -3.53444   TTAGTCGTGCTCAAA                GCGG GCCC CCAC                 TCTACAAGTTGCAAA  50 149
        gntK 2213952 .. 2213979 -   -12   -5.4505   CGCGTCAACAAAAAA        GCCGGGTAGCGGC GAC GCCT-TACCCGGC        TTACGGTGTGGATAT 100 398
         asd 2212389 .. 2212404 -  -6.1  -5.48825   TATTACGCAAAAAAA              GGGTG ACGATG CACCC               TTGGTTCAACACGAA 100 133
        glgB NONE
        glgX NONE
        glgC NONE
        glgA NONE
        glgP 2202673 .. 2202690 -  -9.1  -3.59738   GAGTATATTGGCAAA             CGCCAGC TTTC ACTGGCG              TCGTAATAAAATGCC  75 122
        glpE 2200579 .. 2200595 -  -5.1  -2.69998   AGCAAAGGAAGTAAT              CATCAAC ATT GTTGCTG              TCGCTTAGTCCATAC  49 93
        glpG 2199731 .. 2199752 -  -5.9  -4.56597   TCCGGCCTGGAAAAA           TATCCCGACC ACC GGCCG-GATA           CGCCTCAAGTTCGTT  72 30
IUJ39_RS10990 2198877 .. 2198891 -  -5.6  -3.63515   TGGTAGGCCGAATAA               GGCGTT CAT ACCGCC               ATCCAGCAATCATCT  59 41
        malP NONE
        malQ 2190820 .. 2190837 - -14.1  -5.24129   TGGCGCCATAAAAAA             GCCGGGG AAAT CCCCGGC              TTTTTTACTTCTTCT 100 30
        bioH 2186725 .. 2186748 -  -5.2  -3.87364   GCTACAACAAGACAA          GCAGGAAAGCC AGC GGCTCGCC-GC          ATTGCGCATTGCCCG  61 169
        ompR 2178952 .. 2178999 -  -4.8  -3.30783   TGACGATAAGCAACA GCGTGCGGGCAAATGAACTTCGC GGC GAGAAGCGCATTCGC-CTCATGC TTTAGAACCGTCCGG  54 20
        envZ 2177623 .. 2177640 - -12.7  -4.84359   CGACGTTGAGAAAAA             GGGAGGC TAAT GCCTCCC              TTTCTTATGCCTCTT 100 30
IUJ39_RS10905 2173354 .. 2173364 -  -2.4  -3.60296   GATGTCGACGGTAAA                 CCAG CGG CAGG                 TGGAATGTTGCTCCA  49 495
        nudE 2168587 .. 2168600 -  -9.5  -5.14563   GTTCTGATCAAAAAA               GGCGC TCCG GCGCC                TTTTTTATTTTGTTT  93 100
IUJ39_RS10870 NONE
IUJ39_RS10865 2164594 .. 2164607 -  -3.7  -3.53419   ACCAGATATCAAAGA               GCGCG TTCA CGTGC                GACACTCCTCGTTAA  52 5
IUJ39_RS10860 NONE
IUJ39_RS10855 NONE
        hofQ 2162457 .. 2162472 -  -7.6  -4.27316   TTCGGCAAGGCAAAA              CGCATT TATC AATGCG               TAAGCAACGAAAAGC  74 139
        aroK NONE
        aroB 2160417 .. 2160437 -  -6.2  -5.15969   CCTGAAGCTAAAAAA            CTGACATC TACGC GATATCAG            TCTGACCTTTCTTGT  83 43
        damX 2159011 .. 2159025 -  -2.7  -4.15044   TTTGGCGGTAACAAA               TGCGC CCCTC GCGCC               TGTCCTGAACAAAAA  56 86
         dam NONE
         rpe NONE
         gph NONE
        trpS 2155561 .. 2155575 - -11.4   -5.4251   CGTACATAGAAAAAA               CCGGGA ATT TCCCGG               TTTTTCTAAAGGTCA 100 76
        ppiA 2147881 .. 2147901 - -11.8  -4.46155   GAGACAGGGAGAAAA            CGCGGGCG ACTCG CACCCGCG            CAGGCATGTTTTATG 100 36
IUJ39_RS10780 NONE
IUJ39_RS10775 NONE
        pabA 2146407 .. 2146419 -  -2.7  -3.61609   CCAGTGAAATTATAA                TCACA AAA TATGA                ATAAAAAATCACTTA  50 55
IUJ39_RS10765 2144712 .. 2144728 -  -6.5  -3.83026   CTGTCGGATATGAAA              CTGTGGG TCA CGCACAG              CCAGTTTATTGTCGA  63 443
IUJ39_RS10750 2141506 .. 2141531 -  -9.7  -2.72461   TAACCGCGTTGAAAT         GCCCGAT-GGCG CTA CGCTTATCGGGC         CTACGAGATAAAAAC  69 82
IUJ39_RS10730 NONE
        mdcA NONE
IUJ39_RS10720 NONE
        mdcC NONE
IUJ39_RS10710 NONE
        mdcE 2134021 .. 2134037 -  -2.1  -3.33696   CGCGGGCGCAACGAA              TGCGCCC ATG GGCCGAA              CATCCGGCAGGTCTC  45 48
IUJ39_RS10700 NONE
IUJ39_RS10695 NONE
        mdcH 2131321 .. 2131336 -    -6  -3.06183   GCGAGCGCGATCCAA              GCCTGC TGGC GCTGGC               CGCCGAAGGGCGGAT  53 151
        kefG NONE
        kefB NONE
IUJ39_RS10665 NONE
        slyD 2125064 .. 2125078 -  -8.5   -5.1287   TTGAGACGTAAAAAA               GCGGG TTTTG CCCGC               TTTTTTGTGCCGGAT  91 84
        fkpA 2123764 .. 2123785 -   -13  -5.93809   CCTGCATAAAAAAAA           CCGCCGCT ATAACA AGCGGCGG            CTCTCAGTTTTTATT 100 36
IUJ39_RS10645 NONE
        tusD 2122438 .. 2122450 -  -2.7  -2.53748   AGACAAATGCAATAC                GTTTC ATT AAAAC                TGCACCACCCGATCG  40 19
        tusC NONE
        tusB 2121715 .. 2121737 - -10.6   -4.7268   AAACACGTAATAAAA           CGCCCTCACA CAA TATGAGGACG           CCGAATTTTAGGGCG  95 81
        rpsL NONE
        rpsG 2120678 .. 2120701 -  -8.9  -4.21275   TTAAGTTATCCAAAA          CGGGCGACTT ATCTG AAG-CGCCCG          TCTGGTGACTATGAC  82 51
        fusA 2118464 .. 2118489 - -13.3  -2.78935   ATATTCCTTACTATA         GCGCTCTCCCC TTCA GGAGAGAGCAC          GGGATTTTGGTTTTT  85 52
         tuf 2117215 .. 2117230 - -11.8  -5.11063   AGCAGGCAACAAAAA              GGGCGC CGAA GCGCCC               TCTTCAATTCAAAAC 100 55
         bfd 2116872 .. 2116882 -  -5.4  -5.78622   GGATGTCAAAAAAAA                 GAGT GTG ACTC                 AGGCGATCTCTTTAA 100 24
         bfr 2116307 .. 2116328 -  -2.9  -2.52623   CGGGTTTCATAACAG           GCTGGAATG ATTT CTTTCCAGA            TGGTTAATCGGTAAC  40 29
        rpsJ NONE
        rplC NONE
        rplD NONE
        rplW NONE
        rplB NONE
        rpsS NONE
        rplV NONE
        rpsC NONE
        rplP NONE
        rpmC NONE
        rpsQ 2110484 .. 2110509 - -14.9    -5.252   TATGGGTAGAAAAAA         TAAACGGCTCA TCGC TGAGCCGTTTA          TTCGTTGAGAATGCG 100 48
        rplN NONE
        rplX NONE
        rplE NONE
        rpsN NONE
        rpsH NONE
        rplF NONE
        rplR 2107469 .. 2107479 -  -3.2  -3.32963   ACCTCTACCTTAGAA                 CTGA AGG CCAG                 CTTCACGGGCAGCAT  48 9
        rpsE NONE
        rpmD NONE
        rplO NONE
        secY NONE
        rpmJ 2104778 .. 2104807 - -12.3   -4.6645   TACAGACATACAAAA       GATTG-GCTGGCTA ATC TAGCCAGCTCAACC       CAACTTTGCAAGAAA 100 55
        rpsM NONE
        rpsK 2103921 .. 2103939 -  -4.4  -4.18763   AACAAACCTGGAAAA             CGAAGCGT TAT ACGCGACG             TTTTTTCGGCGGACG  64 14
        rpsD 2103271 .. 2103289 - -10.4  -3.14132   TCTCTTTGGTACTAA             GCTTTACT TGG AGTAAAGC             TCGACGATCAGGTGT  74 10
        rpoA NONE
        rplQ 2101798 .. 2101811 -  -9.5    -5.626   GAGGGTATAAAAAAA               CCCGC CGAA GCGGG                TTTTTTTACGTTACT 100 46
IUJ39_RS10450 NONE
        zntR 2100661 .. 2100713 - -13.6  -3.61894   AACCGTTCTTAATAA GCAGAAGGCCAGTGGTAAAAAAGT CGCTT ACTTTCTTGCCACTGGCCTCCCAG TTCCCTCGATTACCG 100 232
        dprA NONE
         smg NONE
IUJ39_RS10400 NONE
        tsaC NONE
        aroE NONE
IUJ39_RS10385 2091879 .. 2091903 -  -4.1  -4.08767   GGCAGTCCGGTAAAA          CAGATCCGCCC CCT GAGCGATGCTG          AGAGATTGGGCCTGC  60 87
IUJ39_RS10375 NONE
IUJ39_RS10370 2089387 .. 2089400 -  -2.3  -2.72471   TTTTCATCAGACAAT               CTGTG TGAG CACTG                CAAAGACCGTTTCTT  40 46
IUJ39_RS10365 2089273 .. 2089286 -  -2.3  -4.20084   AGTATTCAGGGAAAA               TCTGG TAGG CCTGA                GTGGACTTGAACCAC  57 14
IUJ39_RS10360 2089028 .. 2089061 -  -4.5  -4.49756   TTTTAAAGAGCAAAA     CTTCGCAGTGAACCC TTTC AGGTACACTCTGAAG      TATTTTTTATCAACG  69 52
IUJ39_RS10355 2085878 .. 2085896 -  -7.4  -2.73903   AAAATTCTCTCAAAC             CGCCAAAA CAT CTTCGGCG             TTGTAAGGTTAAGCC  58 30
         rrf NONE
IUJ39_RS10345 NONE
         rrf 2085305 .. 2085339 - -15.3  -3.35542   CTCACTGTGAAAAAT    GCAAAAAGGCCTAATC TTTC GATTAGGCCTTTT-GC     TTTATTTGATGTCTG 100 36
        envR 2078756 .. 2078768 -  -6.2  -3.61715   TATCGTCTGGAATAA                CGCG TGGAT CGCG                CTTTCGTGAATGAAC  62 292
        csrD 2062423 .. 2062441 -  -5.9  -3.54475   CTGGCGAGCAGACAA             GCACCCC CCCAT GAGGCGC             AGCGCGCGTTATTCT  57 66
        mreB 2061134 .. 2061148 -  -2.8  -2.75064   GCCTGCATCCAACTA               CTCTTC GCT GAACAG               GTCGCCGCCGTGCAT  41 8
        mreC NONE
        mreD NONE
IUJ39_RS10220 NONE
         rng NONE
        yhdP 2053500 .. 2053511 -  -3.6  -2.60065   ACCGGATAAACACAG                CGCC GTCC GGCA                 TGACTATTTACTGAG  42 69
        tldD 2051832 .. 2051857 -  -4.7  -5.19819   AAAGAAAAGTAAAAA         CGACGGGTT ATTGCTGG AAACCGTCG          TGGGCCGGATAAAGA  80 133
        aaeX NONE
        aaeA NONE
        aaeB 2047572 .. 2047590 -  -5.2  -5.77988   ATAGACATAAAAAAA             CCCACGCT TTT AGCATCGG             TTCTTGTGAATTAGC 100 36
IUJ39_RS10180 2047095 .. 2047111 -  -2.3  -3.87815   GCCGAGTTGTATAAA              TAGAC CCTCGTC GTCTA              ACCCGACGACTTGCC  53 71
         mdh 2044236 .. 2044251 - -10.4  -5.66684   GAAGGGATAAAAAAA              CCGGAG TCAG CTCCGG               TTTTTTTTATAGCAA 100 49
        zapE 2039621 .. 2039642 -  -3.8  -2.87132   TTTGGCCGGCACAGA           GAAAGTTT GGGAAA AAACTCTC            TTGTAACGTGGGGTC  46 183
        rplM NONE
        rpsI 2038612 .. 2038625 -  -9.5  -5.60993   TCGCCCATAAAAAAA               CCCGC CGAA GCGGG                TTTTTCGCTAACAGT 100 63
        sspA 2037716 .. 2037727 -  -3.6  -3.35465   ATCCATACAGATTAA                CCCC GACC GAGG                 CGCATTTCACGTTCA  48 10
        sspB 2037184 .. 2037201 - -12.7  -5.18643   GTAACCAAAACAAAA             CAGGCCC TTTT GGGCCTG              TTGATTATTTTACCA 100 30
        nanR 2036288 .. 2036303 -  -4.7  -4.49556   GCTTCACTAAATAAA              GATCG AATGCG CGATC               GCTAGCGCGTTTTTT  69 27
        nanA NONE
        nanT 2033643 .. 2033665 - -16.4  -3.52113   ACTCCCTTACAAATA           TTGCCCGGTT TAA AACCGGGCAA           GCGGATTAACTTTTC 100 31
IUJ39_RS10100 NONE
        nanK NONE
IUJ39_RS10090 2031584 .. 2031613 -  -2.7   -3.4529   ACAGGAGGATGAGAA       CTGCCCGCTGC GATTTTAG GCCGCCAGCAG        ACTAGCGCGCACCTT  48 11
IUJ39_RS10060 2020019 .. 2020044 -  -8.3  -2.60813   TATTGTGCGAAATAT         GCGTAGCGC CCCTCATC GCGCTACAC          TATGGGTGGGATCCA  63 20
        arcB 2017514 .. 2017560 -  -3.6  -4.07568   CGTGCGGCCTGAAAA TAGGGCTGCGCCTTTTACATCA TCA TAATAAGCACGGCGCAGCCATA ATTTCCCTGGTGTTG  57 74
        elbB NONE
        mtgA 2015978 .. 2015992 -  -8.5  -3.30771   TCATAGGTCGGATAA               GGCGG TTACG CCGCC               ATCCGGCAAAATCAA  69 37
        mlaF NONE
        mlaE NONE
        mlaD NONE
        mlaC NONE
        mlaB 2003657 .. 2003677 -  -3.2  -4.18934   GATCACGCTAATAAA            TCAGCGCT ATAAA AGTGCCGA            ATAGCGCCGCTAACG  60 114
        ibaG NONE
        murA 2001956 .. 2001979 - -11.7  -3.51232   GTGCCCGCAAAGCAA          CCCCCGCAA TAGCGT TCGCGGGGG           TTATTCAGCGTACAG  88 45
        rplU NONE
        rpmA 1999561 .. 1999581 -   -14  -4.75174   CATCGAATGTAAAAA            GCCCCGCA ACAGG TGCGGGGC            TTTCATCCGTTACCG 100 54
IUJ39_RS09925 NONE
        cgtA 1997257 .. 1997276 - -16.4  -4.72029   CGGAACCTAACAAAA            CGGGCCGC AAAT GCGGCCCG             TTGCATATTGTAGGC 100 73
        greA 1994974 .. 1994988 - -12.8  -4.36914   TCTCCGTTGATAAAA               GGCCGC TAT GCGGCC               TTTTTCCTTTCTTTA 100 74
        rlmE 1993762 .. 1993776 -  -2.8  -3.40899   AACCTCTTATTACAA               CTGTGT TAA AAACAG               CGTCAGGATACTCTA  46 84
        ftsH 1991738 .. 1991757 - -12.8  -5.75538   GTTAAAAAAGAAAAA            CCCCGGGG CAAG CCCCAGGG             TTTCGGTGAGCGCTA 100 65
        folP NONE
        glmM 1989480 .. 1989495 - -11.8  -3.25823   TTTTGCGGACAGTAA              GGCGGC AACC GCCGCC               TTTTTAGTCACTTAA  83 45
        secG NONE
IUJ39_RS09875 1988823 .. 1988838 -    -9  -5.60864   CACAGACGAAAAAAA              GACGCT TTTC AGCGTC               TTTTTTCTGGAATAT 100 41
IUJ39_RS09865 1986751 .. 1986766 - -10.4  -5.60689   TCAGATAACAAAAAA              CCCCGA TAAA TCGGGG               CTTTATATAACTGAA 100 152
        rimP 1986241 .. 1986257 -  -6.5  -2.51207   CAGACTATTAAAAGT              GGGGAAC CAG GTTCGCC              TTCTGGATATTACTC  53 1
        nusA NONE
        infB 1981870 .. 1981884 -  -8.5  -5.61913   AATAAAGACAAAAAA               GGGGC ATTCA GCCCC               TTTTGAAATTCATGC 100 138
        rbfA NONE
        truB 1980431 .. 1980445 -  -2.8  -5.07107   TAAACTGTTAAAAAA               TTTACG CGA CGTTAA               GCGGCAGTATTCTAC  73 75
        rpsO 1980037 .. 1980053 - -10.8   -5.0538   GTCCACTTGAAAAAA              GGGGCC ATGAA GGCCCC              CTTTTTCTGAAACTC 100 48
         pnp 1977665 .. 1977685 - -18.3  -3.57792   CCAGCCAGGTCTAAA            GCCCTCCGC AAT GCGGAGGGC            AGATGGCAACCTTAC 100 37
        nlpI 1976644 .. 1976663 -  -6.4  -4.04023   ATTAACGAACAACAA            CACCCTCA CCCG CGAAGGTG             ATGGCAATCAAAAAG  68 65
        yrbN NONE
        deaD 1974560 .. 1974582 - -10.6  -6.11392   AAAGAAATAAAAAAA           GCCCCGAT GATTACG ATCGGGGC           TGTATATTTTACTTT 100 69
         mtr 1972998 .. 1973009 -  -3.6  -3.85698   CTGGTCGGTGATAAA                GCGA AGGT CCGC                 CACGGGCTGGAATCT  56 244
IUJ39_RS09790 NONE
IUJ39_RS09785 1968821 .. 1968857 -  -5.9  -3.75169   GAGTATCGCATCAAA   CAGCTCACAAAGCGCC AGAAGG AGCGCCTTGTGA-CGG    AACAAGAGGCGTTTG  63 74
IUJ39_RS09775 1967764 .. 1967781 -  -3.3  -5.22039   GTGAAAGGGAAAAAA             GGCGAGG CCAG CGTCACC              ATTGATAAGGCGATC  82 365
IUJ39_RS09765 1966656 .. 1966666 -  -5.4  -2.79518   GTAAAATCGTCAAAT                 GTGA AAG TCAC                 CACCGAAAACGGCGA  48 219
        rsmI 1962198 .. 1962226 - -11.1  -2.82432   AAACGAGTTAATAAC        CTCAGCAGATAAC TCA GTTACCTGCCGAA        TATATATCATCGTGA  74 65
IUJ39_RS09715 1955520 .. 1955540 -  -8.2  -3.72893   CAGCGCCCCACCAAA            CGCGGCCT GATTT ACGCCGCG            ACGCCCGCCAGCGAT  72 459
        garL NONE
        garR 1952010 .. 1952021 -  -7.2  -3.32844   CCTGTTACTGCACAA                CGCC GGAC GGCG                 TTTCTCTTATCCAGC  63 88
        garK NONE
        rnpB 1950288 .. 1950301 -  -9.5  -4.93365   CCTGATAAGCAAAAA               CCCGC CGAA GCGGG                TTTTATGAAGAGGTG  93 155
        tdcA NONE
        tdcB NONE
        tdcC NONE
        tdcD NONE
        pflB 1942584 .. 1942623 -  -2.7  -3.08798   ACCGTTCAGTGAAGA  TCCGT-CGCGGGGCGATC CACAC GATCGCCCCGTTCACGTT  ACATCGCCTGAGTAA  43 24
        tdcG 1941107 .. 1941126 - -10.7  -5.58179   GATCACAACAAAAAA            GGGCGCA TTTTAG TGCGCCC             TTTTCCCATGCTTCT 100 87
IUJ39_RS09655 NONE
IUJ39_RS09650 1938175 .. 1938197 - -16.3  -3.25942   ATCTGGCGACACGAA           TGCCCCGGC CTCCT GCCGGGGCA           TTCGTTATTAATGCG 100 33
        yhaJ 1936226 .. 1936236 -  -8.2  -3.53012   GGCGCTGCTTTTAAA                 GCGC CGC GCGC                 TATTTATTTCCCGGC  67 29
        rlmG 1920225 .. 1920236 -  -7.2  -4.27316   TGCTGCAACGCAAAA                CCGG TAAA CCGG                 GGGAAGGGTTAGGCA  72 446
IUJ39_RS09510 1914881 .. 1914891 -    -4  -4.01137   AAAGCAACACAATAA                 CAAT TAC ATTG                 AAATTTATTTACATG  59 167
IUJ39_RS09505 1912927 .. 1912979 -  -4.9  -4.67353   GGAGTTACGTAAAAA TCCGCAGATGAAGC-GGGCGCTGGA TAACT TCAAG-GCCGTGCTGGATCTGCGGA TAAACCACAGCGATA  72 111
IUJ39_RS09495 1911255 .. 1911280 - -11.3  -4.67635   TTTAAAATCATAAAA         TTAAGCCACTC AAAA GAGTAGCTTAA          TTGTTTCTATAATGC 100 139
         mug 1910199 .. 1910216 - -14.1  -3.95073   TCGTACACGCATAAA             CGCCGCC TTAC GGCGGCG              TTTTTTATCAGGTCA 100 111
        tsaD 1904265 .. 1904297 -  -3.3  -3.53012   TTTTTTGGCTTTAAA      GGCGGGAAAGGCG TAGCGAC CGCGTTTGGCGCC      ATTGCGCCCATCGGC  49 491
        folB 1903428 .. 1903448 -    -4  -3.27715   AAAACACAGCAAAAG            TGGATCTC GCGTT AAGACCCA            TATATAACCCTTTGG  50 67
        bacA 1902540 .. 1902553 -  -9.5  -3.30124   CTGTAGGCCGGATAA               GGCGG AACG CCGCC                ATCCGGCACGGTCAA  74 44
IUJ39_RS09435 1898957 .. 1898986 - -10.7  -2.94708   TATCCTTTAAATAAT       GCCGGATGGCGACG TTT CGCCTC-ATCCGGC       CTACAAAATCCGCAT  75 91
        glnE NONE
        hldE 1894513 .. 1894526 -  -2.3  -5.42259   TTAGGTCGAAAAAAA               GCAGC GTCA ACCGC                GAGATACGCGTCGAA  77 107
        glgS 1893665 .. 1893692 -  -9.8  -4.46656   CCCACAAGAGTAAAA        CGTGAACGGGCC TGAC GGCCCGCTCATA         CAAGATCTGAATAAT  89 69
        ribB 1892219 .. 1892238 -  -9.3  -5.64873   CGTAATAACAAAAAA            CCGAAGC GTTTTA GCTTCGG             TTTTTTTCATCATGA 100 61
        ygiD 1886817 .. 1886851 -  -7.1   -4.1347   GTCGAATGATAGAAA    GTGCCGGATGGCGGCGC AAA GCGCCTT-ATCCGGC-C    TATCCCACCTGCACC  72 25
        nudF NONE
IUJ39_RS09360 NONE
        cpdA NONE
        yqiA NONE
        parE 1878583 .. 1878596 -  -6.7  -3.30243   ACGTAGCCCTGATAA               GATGC GTAA GCATC                GCCATCAGGCTACGG  61 104
IUJ39_RS09320 1874939 .. 1874956 - -14.1   -5.0065   GAGTCACAAAGAAAA             GGGCCGC GAAC GCGGCCC              TGATGGGGTTTATTT 100 35
        parC 1872498 .. 1872550 -    -9   -2.5294   TAGGCCGGATAAGAC GCTACCGCGTCGCCTTCCGGCAACG GCAG CGT-GCCGGAAGGCGGCATAAATGC CTTATTCGGCCTATG  65 53
        plsC NONE
        ftsP 1870065 .. 1870096 - -10.8   -2.6993   AGAAATCGAAAGGTA      TTCACCTCTCGCCC TGAC GGGCGAGAAGAGGA       TTACGGCGCCGGATT  74 26
IUJ39_RS09300 1867731 .. 1867750 -   -15  -5.31275   GCGGATGATAAAAAA            CTGGCCGC GCTG GCGGCCAG             AATTCGGGATGTCCA 100 92
IUJ39_RS09275 1862385 .. 1862413 -  -4.3   -2.5805   ATGATCGGCCAGAAT        GGCCCGGTTGCGC TTC GCTGATCCGTGCC        GGGATAACCAACTTA  46 38
        exbB NONE
        exbD 1858911 .. 1858938 -  -6.3  -5.10461   CTTAGGCAATAAAAA       GCCGGAT--GGCG GTTG CGCCTTACCCGGC        CTACAGCGTCAGCAG  83 46
IUJ39_RS09235 1856024 .. 1856048 -  -7.1  -3.41738   CAGGTGAATAGAAGA          GATGGCGAC TATCGAT GCCGCCACC          TATTTTTTAGCGACG  63 409
IUJ39_RS09225 NONE
IUJ39_RS09220 NONE
        hybO NONE
        hybA NONE
        hybB NONE
        hybC NONE
IUJ39_RS09195 NONE
        hybE NONE
        hypA NONE
        hybG 1846718 .. 1846749 - -16.8  -3.28712   CCTCGCCCGTGATAA      CAGCAGAAAATCGG CAAG CCGATTTTCTGCTA       CCGAACAGACAAAGC 100 82
         gss 1843575 .. 1843613 - -13.3  -3.50853   TTTCGTCAAGCACAA  CCGCCCAGGATATCGGCA CCCA TGCCGATATCCCGA-CGA   GAAAGACCCCGTTAC 100 37
IUJ39_RS09160 1841853 .. 1841881 -  -8.1   -2.7224   TCATACCAGACAGGA       GCGTGACCCGGC GTAAAT GCCGGGTC-CGG        TGGGTCAGCGCTTAA  60 45
IUJ39_RS09135 1835649 .. 1835668 -   -15  -3.20078   CAGGTCAGATGAAGA            CGGCCACC CTAC GGTGGCCG             TTAGAGCCTGATGGC  95 76
IUJ39_RS09130 NONE
IUJ39_RS09125 1833089 .. 1833100 -    -3  -5.27779   GCGAACACTAAAAAA                TGAT TTAA ATCA                 AAAAAAACAAACAAT  76 205
IUJ39_RS09120 NONE
        iraD 1831749 .. 1831769 -  -8.3  -3.39449   TCGTAGCAATATTAA            GCGAATCGA CGT TCTATTCGC            GTCAATAATGCGCTG  69 181
IUJ39_RS09105 NONE
IUJ39_RS09100 1828316 .. 1828336 -  -5.4  -3.26318   GCGGTAATAACAAAT            GGGGAG CGGGTTATT CTCCCC            TGGAATACCAACGGT  54 62
IUJ39_RS09095 NONE
IUJ39_RS09090 1825968 .. 1825984 -  -6.6  -3.09234   ATAAATCGCACGGAA              CTGGTT TCCCG AACCAG              AATGTCCTCGGTACA  56 170
IUJ39_RS09080 1823636 .. 1823646 -  -6.8  -2.78088   AAATGCGGCAAGAAC                 GGCT ATC AGCC                 CGGAAACCTGCTCAG  55 20
IUJ39_RS09075 1821440 .. 1821450 -  -6.8  -3.85698   TTGTGCTGGCAGAAA                 CGCA TCC TGCG                 GCGGCATGTGACCAG  66 409
        ripC 1819988 .. 1820003 -    -4  -2.97029   CTCTATTAATGAAAT              CAAGAA AAGA TTCCTG               CCCGGGCGAGTAATT  46 9
        ripB NONE
        ripA 1817620 .. 1817641 -  -2.2  -3.50447   CCAATCCCGACAGAA           CGAAAACC GGGTCT GGCCTCCG            TAAGAAGTAAGCTTT  47 470
IUJ39_RS09045 1815784 .. 1815807 -   -14  -4.87133   ATTCCTTAAATAAAA          CCGGAATCTA TTAA TAGATTCCGG           ATAGGCTAACTTTTA 100 52
IUJ39_RS09040 1811832 .. 1811852 -    -4  -3.01712   TTTTCTCCCTTAACA            GTACCGCT GACAA AACAGTAC            TGTTCTGTTTAATAT  47 42
IUJ39_RS09035 1810281 .. 1810304 -  -3.7  -2.73124   TGTCATTGTGGAAAG          GCCGGCATC CATAGC GCTGGCGGC           ATCTGCCACGGTGTA  45 311
IUJ39_RS09015 NONE
IUJ39_RS09010 1808433 .. 1808459 - -12.3  -3.73995   GTCGTTATAAAAAAT         GAGGGCGCTGT ATGTG ATAGCGCCCTC         GTTCAGGTTACATAA 100 47
IUJ39_RS08970 1799257 .. 1799267 -  -4.6  -4.24948   GTATTACACTCAAAA                 CGGC ATT ACCG                 ACTGGCAGACTGTGT  64 220
        trmB NONE
IUJ39_RS08940 1794134 .. 1794155 - -12.9  -3.11024   TTCCTCAAGACAAAG           CGGGCCGGC ATAT GCCGGCCCT            GTACTCATTAGTCCC  86 33
IUJ39_RS08935 1793355 .. 1793375 - -11.9   -5.0095   AAAAACAGAATAAAA            GGCGCAGAT GCG ATCTACGCC            ATTGTTTAAAAAGGG 100 45
        ansB 1791818 .. 1791833 -  -5.4  -3.57144   GGCGTTACCTGGAAA              GCCAACG TGA CGT-GGC              GCAGGCCGATAAACC  58 351
IUJ39_RS08900 1787659 .. 1787675 -  -2.1  -3.60048   GTGGTCTTAAAAAAG              CTGCGAT TTT AACGCCG              GCTCGCCAGGATACA  49 99
IUJ39_RS08895 1786517 .. 1786529 -  -3.3  -4.83169   ACTTCGGCACAAAAA                GCATC GGC GTTGC                AATAGGACAACGCAT  71 436
        yqgB NONE
        speA 1776594 .. 1776628 - -13.6   -5.6473   ATAAGATGAAAAAAA     TCCCCTCCGCGTCG TTAAACC CGACGAGGAAGGGA     TTGATTTGTAAATCG 100 157
        speB 1775252 .. 1775274 -  -2.6  -4.57073   GATCTTGGCGAAAAA           CTGGTGAACT CGC AGTTCTCCCA           ACGTCAGGAGTCCGA  63 379
         tkt 1772413 .. 1772432 -   -15  -5.63236   ATCTAAAAATAAAAA            CGGGTCGC CGAA GCGACCCG             TTTTATGCCGTATTA 100 45
        cmtB 1771674 .. 1771685 -  -4.4   -3.4811   TGTTCCATAATAATA                TCCT GTAA AGGA                 GAGAATAATTATGCG  54 34
IUJ39_RS08820 NONE
IUJ39_RS08815 1768971 .. 1768997 -  -2.3  -3.41222   CCGTAATGCGAAATA        GCGGC-C-ATGCC AGA GACATCATGCCGC        CTCCCCGATATCCAC  45 17
        glpX NONE
IUJ39_RS08805 NONE
IUJ39_RS08800 1766687 .. 1766711 -  -9.2  -2.70932   GGGCGCGGGGAACCA          GCGTCGCGGC GATTA GCCATGACGC          TGCGTTTACTCGGCG  63 97
         epd NONE
         pgk 1761097 .. 1761116 -   -15   -3.6053   TCGGCGATAAATCAA            CGGGCAGG AATC CCTGCCCG             TAACGATTACTTCTT 100 32
        fbaA 1759903 .. 1759922 - -12.2  -5.61596   ATGGGGATAAAAAAA            TGGCTTCC CAAG GGAAGCCA             TTTCAATCAGCAGAC 100 45
IUJ39_RS08755 1758832 .. 1758843 -  -3.6  -2.70532   AGTCGGATAAACGCA                GCGC CAAC ACGC                 ATCACGGGATGAAAA  43 41
        argO 1758017 .. 1758029 -  -3.4  -2.78384   CTGTTGTCCATCAGA                CAAC GCTTA GTTG                AAAAGTGCGTAAATA  43 19
IUJ39_RS08745 1757152 .. 1757177 - -16.9  -3.55548   GAACATTGGGGGAAA         CACGGCCTGGA AGCG CCCAGGCCGTG          CGAGATTACTGCGCG 100 31
IUJ39_RS08740 1755934 .. 1755944 -  -5.4  -3.59738   GAGCACAGCGTTAAA                 GTGA TCA TCAC                 CGAACAGGGCATTGC  59 213
        rpiA 1748611 .. 1748623 -  -2.7  -4.12962   CATATCAAAAAAAAT                TATCG CGG CAATA                CGAACGTTTGCGTCA  56 202
        serA 1747082 .. 1747100 -  -4.4   -4.4009   CCGCACGCTACAAAA             CTGGCCGT CAC ATGGCCTG             ACACCGGTTGGCTAT  67 226
IUJ39_RS08685 NONE
        pepP NONE
        ubiH 1742722 .. 1742744 -  -4.1  -3.30124   TCGTAGGCCTGATAA          GCGAAGCGCC AGCA GGC-CTTTGC           GCAGCTCCTGCCGGA  50 59
        ubiI 1741405 .. 1741431 -  -5.8   -3.8901   TTTCAAATGAGGAAA        GCCC-CCCGGC GCGATG GCCGGGAAAGC         AAAGTGTGACGGGTT  63 71
        gcvT 1739931 .. 1739951 -  -8.9  -2.84946   AAAAAGGATGAATCA            CGCGACGGC TTT GCCGTTACG            CACAAAAACAGGTTT  67 2
        gcvH 1739408 .. 1739428 - -15.5  -3.08679   TGGGGTGAGCGAAGA            CAAACCGGC TAC GCCGGTTTG            AACAGCGCTTGCGCT  93 110
        gcvP 1736295 .. 1736324 -  -6.4  -3.58522   ACTATCAGGCCGAAA      GGCCGGGT--GGCG ACTA CGCCTTACCCGGTC       TACAGAACTTTGCTA  62 53
        yqfB 1734184 .. 1734199 -  -6.2  -2.91924   TTACTCCGGAGAAAC              GTTCAT AGTG ATGAAC               TGCGCCTCTAGCGTA  55 154
IUJ39_RS08640 1733124 .. 1733153 -  -3.6  -3.73402   ACACCGGCCAGGAAA      TGGTCG-CGCGG GCAAAATT CCGCGGCG-CCA       ATAAACGCGCGCTTT  56 378
        sdhE NONE
IUJ39_RS08625 1731319 .. 1731342 -  -2.5  -2.57092   AAGGCTACGAATTTA          CCAGCAATAA ACCTG TCATTGC-GG          ATGGACAACTGTTTG  38 203
        xerD NONE
        dsbC NONE
        recJ 1727393 .. 1727418 -  -9.1  -3.30903   AAAATGCGGTTATAA         GGGCGAAAT ATTAGCGG ATTTCGCCC          CTTAATTACAGCGAA  71 62
        prfB NONE
        lysS 1724687 .. 1724717 -  -8.3  -3.18366   GCCTGAACGAAGAGA      TGCCGGATGGCAGC TAAT GCC-CAATCCGGCA       ATTCACACTTATTTC  67 34
IUJ39_RS08585 1723065 .. 1723082 -  -3.4  -3.14683   AGACTGGCTGACCAA             CTGGCGA TTAAT TCGCC-G             TCAGCATTTCGGTTT  46 26
IUJ39_RS08580 1722891 .. 1722903 -  -9.1  -3.42659   AGCTAAACACATTAA                GCCAG TTA CTGGC                GGTGTTTTGCAACAA  73 51
        sodC 1713803 .. 1713818 -  -4.6  -3.40403   GGGGCCGGAGTACAA              TCCCCC TGGC GGGCGA               CGGTAGGCATGTCAT  51 289
        rcnR 1708075 .. 1708098 - -12.5   -3.2313   GGCTAAAGTAACAGA          TAGCCGGGA TAGTAC TCCCGGCTA           TTTAATATAAGAATC  86 23
IUJ39_RS08500 1704428 .. 1704444 -  -8.1  -4.91109   TCGCGACGACAAAAA              TCAAAAC GAC GTTTTGA              TTTATTTAACGGCAT  87 437
        kduI NONE
        kduD NONE
IUJ39_RS08485 1702285 .. 1702299 -  -2.8  -2.50074   CCTGCCACAACAGAG               TAAGAC ATA GTCTGA               AATTACGGGATACTC  40 239
        araE 1700390 .. 1700417 -  -5.4  -3.06796   CGCCACGCGACGTAA        CCCCTGACGAGC GATA GCTCGCCCGGTA         GCATCCGCGATGTGC  52 455
        lysA 1697561 .. 1697583 -  -4.8  -2.50589   GGTGAAAGAAAGTAC           GCGCCAGAAA GTG TTTATGGCGA           TGCAGGCGCAGAACT  48 184
IUJ39_RS08450 1695931 .. 1695948 - -12.7  -5.75945   AGGGGCGAAAAAAAA             CCTGCGC ATCC GCGCAGG              TTGGTGCAAGAGATA 100 66
         aas NONE
        lplT 1692167 .. 1692192 -  -5.3  -4.62302   GAACAGGCGCAAAAA         GCCGTTGCCGCC TAC GTCGGCATC-GC         GAAACGTCACAACCT  75 318
        rppH NONE
        ptsP 1685596 .. 1685620 -  -9.2  -3.74361   GATAGCGATTAATAA          GCGCGCCTGC GTGTT GCAGACGCTC          CAAAGGTGCGAATAA  77 167
         lgt NONE
        thyA 1683829 .. 1683848 - -10.7  -5.82388   AAAGGGCAAAAAAAA            CCGACGC GCAATG GCGTCGG             TTATGGCAGGATCAT 100 47
IUJ39_RS08395 1683224 .. 1683236 -  -4.8  -3.16492   GCATAGTTATTAACA                CGAG CCAGC CTCG                TTATGCTCGCATAGC  52 7
IUJ39_RS08390 NONE
IUJ39_RS08385 NONE
IUJ39_RS08380 NONE
        recC 1678447 .. 1678460 -  -2.3  -3.06418   TGGTCACATAAACCA               TCGGC CTGA GCAGA                ACGGGATATTGCGCT  42 130
        ptrA NONE
        recB NONE
        recD 1669651 .. 1669662 -  -5.8  -3.61398   CGCCCGCTGGAACAA                CAGG GTAT CCTG                 GTACGTCGCTCCCGC  60 495
        amiC 1667111 .. 1667124 -  -8.1  -3.41636   AACCAATTTAATGAA               CACCC TAAT GGGTG                TTTTTTTGTTTCTGC  65 112
        mltA 1665524 .. 1665542 - -10.3  -5.55769   CCTCAGAATAAAAAA             GGTGAGG TCATC CCTCACC             CCTGCTCACTATTTT 100 97
        tcdA 1664667 .. 1664691 -  -2.6   -4.3739   CAGGGCCGGATAAAA          CGCGTCGGCG TGATT CTCCGCCCCG          TCCCTTTTAACCCTG  60 32
IUJ39_RS08310 1661366 .. 1661385 - -10.7  -2.57423   ATAGTGATTAATGTA            GCACCGC CATATT GCGGTGC             TTTTTTTTGCAAATA  74 46
        gcvA NONE
IUJ39_RS08300 NONE
        rlmM 1658591 .. 1658624 - -13.2  -3.05022   GCCGTTAGACACACA     TGGCCGGATAGCGGC GCGTT GCCTC-ATCCGGCCA     GTGAAAATGCATTAT  86 37
        fucA NONE
        fucO 1650036 .. 1650056 -  -4.5  -3.58522   ATCAGCAGTTCGAAA            GTCCCCGGC GTC GCCGGTATC            GGCCCCAAAAGCGCG  55 317
         syd 1642867 .. 1642879 -  -6.2  -3.05463   AGCCTTTCCATGTAA                CGCC CTCCT GGCG                TGTCCTGCAGAAGCG  56 292
IUJ39_RS08225 NONE
        truC NONE
IUJ39_RS08215 1640626 .. 1640638 -  -6.9  -5.01535   GGAGAAGTATAAAAA                GCGCG TCA CGCAC                ACTCACCGTGCAACA  82 341
        gudP 1639124 .. 1639135 -  -4.4  -2.64099   CCTTGTCATGATAAT                TGTC CTGC GACA                 GGTTTCAGTTCAATA  46 4
IUJ39_RS08205 NONE
        gudD 1636389 .. 1636408 -  -5.6  -2.83449   ACACCCTGAGAAGTA            CCGGCTCC TTAC GGAACTGG             CTCTGCCTTAACGCA  50 33
IUJ39_RS08195 1634722 .. 1634759 -  -9.7  -3.85698   TTGCTGCGCTATAAA   CCCGGCGCCAAC-GTAGC AGC GCGTCTGATGGCGCCGGA   ACCGGCTGAGTTTAT  79 462
        rlmD NONE
        relA 1628689 .. 1628719 - -12.5  -3.78775   GGCCCGATGAGTAAA       GCGCCATCGGGCG AAAAA CGCCGGATGGCGT       ACACGTTATTAATTC 100 34
        mazG 1627777 .. 1627787 -  -4.6  -2.88788   GGAGTGAGAAAATAG                 CCCC TTT GAGG                 TAAATGTTTTTGACG  48 100
        pyrG 1625959 .. 1625982 - -13.9  -4.08164   AAAACTTCAGACAAA          CGGTGCACC GCTGAG GGTGCACCG           CCGTTCTAACTTTTT 100 40
         eno NONE
IUJ39_RS08160 1623253 .. 1623271 -  -2.2  -5.61913   AACAAACACAAAAAA             CCCCGCCG AAG CGCTGAGG             GATCCCCATAAATCT  86 44
        queE 1622153 .. 1622165 -  -4.7  -4.42806   TCATGGTGAAAGAAA                CCTGC ACA GCCGG                CTGCGTCTACCGAGG  66 348
        cysJ NONE
        cysI 1617793 .. 1617804 -  -5.8  -3.30243   ACGTAGGCCGGATAA                GGCA TTGT TGCC                 GCCATCCGGCAGTTT  56 45
        cysH 1616920 .. 1616939 -  -3.4  -3.11569   TGACTGATTTAAAAT            CCAGCAGC GTTG GCAGCTTG             CGGAAATTTTTCATG  45 73
        cysD NONE
        cysN NONE
        cysC 1610346 .. 1610363 -  -6.2  -2.79831   GTAACCTTGACCATA             CCGGGC ATACAA GCCCGA              TGGTGCCTTAGGAAC  53 33
IUJ39_RS08100 1609885 .. 1609912 - -13.6  -3.29144   GGATTGCCGCGACAA        CGCCGGCAAATGT ACC ACATTTGCCGG-G        TGTTACGTATACCCG 100 110
        ftsB NONE
        ispD NONE
        ispF NONE
        truD NONE
        surE NONE
IUJ39_RS08070 1605764 .. 1605787 -  -6.8  -3.23711   CGTACAACGCATTAA          GTGAACAC TGGAAAAT GTGTTCAC           GATACGCTTAACCCA  59 117
        nlpD 1604520 .. 1604532 -  -3.3  -3.35996   TATTCTGACTCATAA                GGTGG CTC CTACC                CGTGATCCCTTGACG  48 74
        rpoS 1603486 .. 1603505 - -11.4  -5.29846   AACGGTAAAGAAAAA            GGCCAGCC TGAC GACTGGCC             TTTTTTTGACGAAAG 100 45
IUJ39_RS08040 1600616 .. 1600644 -  -9.6  -5.03314   CTGATGGCTAAAAAA       TAGCGCA-GCGGC GCAA GCCGCTTACGCCA        TCATCTTGCGTACCA  93 18
IUJ39_RS08020 NONE
IUJ39_RS08015 1596855 .. 1596894 -   -15   -3.5394   AAAGTCTGGTGTAAA  CGTGTCAGGCCCGATAGCG CCG CGCTATCGGGTCCG-CGCG  CCGGAACAGGCTTTT 100 40
IUJ39_RS07990 NONE
        vgrG NONE
IUJ39_RS07980 NONE
IUJ39_RS07975 NONE
IUJ39_RS07970 1583613 .. 1583637 -  -8.6  -2.79796   TGCGATTTGACGACA          TTTGGCTTCG ACCCA CGAAGCCAGA          CCGTACGCTATGTAT  64 96
IUJ39_RS07945 NONE
IUJ39_RS07940 1579745 .. 1579759 - -11.4  -2.87132   CTGCTTTTTGATACA               GCAGCG CCT CGCTGC               TGCTTTTTTATTTGC  78 203
        invF NONE
        invG NONE
        invE NONE
        invA 1573117 .. 1573133 -  -2.3  -3.23598   GAACTAACTCAGCAA              TATCCAA ATG TTGCATA              GATCTTTTCCTTAAT  44 48
        spaK 1572716 .. 1572731 -  -3.2  -2.96366   GATACTGAAGTAAAC              GAGGTG TTTT CATCTC               ATTAGCGACCGACTA  44 19
        invC NONE
        spaM NONE
        spaN 1570000 .. 1570014 -  -2.1  -3.12351   CTGTCTCACACGCAA               TGACA TCAGG CGTCA               TCCTCCTCGCCAGAT  42 16
IUJ39_RS07885 NONE
        spaP NONE
        spaQ 1568133 .. 1568146 -  -2.5  -2.64805   TCAAAGTACAACGCA               TAAAA CATT TTTTA                CCCCTTAGCCAACGC  40 23
        spaR NONE
        spaS 1566226 .. 1566236 -  -2.4    -3.767   GATGCAGTTATTAAA                 CCCC GAC GGTG                 GTTAGTGAACATTCA  51 81
        sicA NONE
IUJ39_RS07855 NONE
IUJ39_RS07850 1562618 .. 1562634 -  -6.5  -3.29947   GACCTATCAGATTAA              GCGCGAA TAT TTCCCGC              GATAGCGGCGAATGC  59 5
        sipD NONE
        sipA 1559491 .. 1559504 -  -6.7  -2.66899   TCCTAACTAATTAAT               TCTGC ATAT GCAGA                CCATCAACAGTAGTA  55 7
IUJ39_RS07835 NONE
IUJ39_RS07830 NONE
        sicP 1558179 .. 1558205 -  -4.4  -4.26903   CTGACTGGAGTAAAA         GGCTTGATCGAA TCA TTTAATCCAGCC         ATGAGGGTTATTGCA  64 317
        prgH NONE
IUJ39_RS07795 NONE
        prgJ NONE
        prgK NONE
        orgA NONE
        orgB NONE
IUJ39_RS07770 1548263 .. 1548282 -  -2.2  -4.32804   ATAAGGAACTTAAAA            TCGTTATA TTCT TATAAAGA             AATAATTAAAACTCA  59 320
        hilC 1547274 .. 1547286 -  -6.3  -3.16604   ATACCATAATATATA                CTCTT ATT AAGAG                ATATATTTTCGCATC  57 81
IUJ39_RS07760 1545927 .. 1545944 -  -4.1  -4.11216   GGCGCACGGTTAAAA             GCAGCTT TCAG AAGATGC              AATATGGTTGTTGAA  59 287
IUJ39_RS07735 1541566 .. 1541583 -  -6.9  -3.53444   GTATTCCCGCCGAAA             CGCTGCG CACG CTCAGCG              GCATGGAATGGCCGG  61 409
        hycA 1535200 .. 1535230 - -12.6  -3.65542   CCCATCCCCAAAACA       TTCATGACGTGGCG CAA CGCCACATCGCGAA       TCAAAGCAGGCAACG  95 43
        hycB NONE
        hycC NONE
IUJ39_RS07685 1531751 .. 1531769 -  -3.7  -2.90992   AACTCTCTTAAATCA             CGCCGCC AGCAA GGAGACG             AAGGCTAAAAACGCA  46 4
        hycE NONE
        hycF NONE
        hycG NONE
IUJ39_RS07665 NONE
        hycI 1527746 .. 1527762 -  -2.9  -4.81212   CTCAGGAGAACAAAA              GCGTGTC ATC GACACAA              GTGACGATGACGGAT  68 95
        hydN 1527031 .. 1527057 -  -2.2  -3.75766   CCTACAACCGAACAA        GCCGTA-GGCC GGGTAA AGCCATCCGGC         AATGCTTTGTGGCGT  51 63
        hypF 1524698 .. 1524716 -  -4.4  -3.30124   TGGTAGGCCGGATAA             GGCGCAGC CGC GATCCGCC             CCCCTACGCTTCACT  52 29
        norR 1520294 .. 1520307 -  -2.3  -4.25283   AGTGGTCGATGAAAA               CGGCA AACT CACCG                GCGCCATTAACCTGC  58 66
        mltB 1514012 .. 1514052 -  -3.3  -4.13767   TTGGTCAGCGGAAAA CATTGCCGGAT-GGCGAT ACTTAG ATAGCTTATCCGGCAGTG  AAGAAAGCTGGATAA  57 53
        pncC 1513377 .. 1513396 -    -8  -2.84098   CTCTTGAAGCAATTA            TACTGTAT GCTC ATACAGTA             TCAAGTGTTTTGTAG  61 26
        recA 1512165 .. 1512184 - -11.4  -4.24002   GGGTAAATGCCAAAA            GGGCCGCA TAAA TGCAGCCC             TTGATAGTAATTTAA  93 92
        recX 1511533 .. 1511546 -  -3.1  -3.25652   TGTATTTAAGGAATA               GTCGTC GCA GACG-C               TGCTCGCCGTTAAGC  46 113
        alaS 1508719 .. 1508740 - -17.3   -3.6502   TAGCGTCGACGTAAA           CGCCGCAGC ATGG GCTGCGGCG            TTTACGAACGCTTAT 100 43
        csrA 1508299 .. 1508313 -  -4.2   -5.1356   GTTGACGAACAAAAA               GAGAGG CTG CGTCTC               ACCCGAACGTGAGAC  76 50
IUJ39_RS07565 NONE
IUJ39_RS07560 1507849 .. 1507859 -  -5.4  -3.27029   CCGTATCAAGTAAGA                 GATG GTG CATC                 CGGGAGGATTCGAAC  54 17
IUJ39_RS07555 1507710 .. 1507720 -  -5.4  -3.27029   CCGTATCAAGTAAGA                 GATG GTG CATC                 CGGGAGGATTCGAAC  54 17
IUJ39_RS07550 1507571 .. 1507581 -  -5.4  -3.27029   CCGTATCAAGTAAGA                 GATG GTG CATC                 CGGGAGGATTCGAAC  54 17
IUJ39_RS07545 1507175 .. 1507197 -  -2.6  -3.50326   ATCAAACCAGCATAA           CGTGCGTACA TCG TGTTCTCACA           AACCGAATAACCAGA  48 262
        yqaB NONE
IUJ39_RS07535 NONE
        gshA 1504446 .. 1504462 -  -2.2  -4.85782   TTTTTTAAAAATAAA              CTGAAC TCTTT GTTCCG              GGGCGAGTCTGAGTA  66 126
        luxS 1503775 .. 1503794 - -12.2   -5.1356   GCGCACTAATAAAAA            GCCAGTTC ATGT GAACTGGC             TTTTTTGCATCAGGG 100 129
IUJ39_RS07460 1489972 .. 1490021 -  -6.3  -3.62572   TATCATCAGGCTAAA GCGTGAGCCAGCGTCGCGACTGGC ATT GCCAGTCGCG-CTTTTAATCAGGC GTTACGTCGCCGAAT  62 16
        stpA 1488273 .. 1488283 -    -4  -4.62302   GAACAGGGCGAAAAA                 TTGA CCC TCAA                 AGCGGCTGATGTCAC  70 181
IUJ39_RS07430 1486869 .. 1486886 - -10.5  -3.31263   AGGTTATCCTGATAA             GCGGCGC TTAT GCACCGC              CAGTGACAGATAATT  76 39
        lysM 1486268 .. 1486289 - -10.1  -3.07816   GCGCCAGCGAGTTAA           TGCGTCAGC ATTT GCTGACGCC            GATTCCCATTATTCG  69 87
        tctD NONE
IUJ39_RS07370 NONE
IUJ39_RS07365 1472285 .. 1472321 -  -3.7  -4.50218   AAGCATGAAAAATAA    CGTACTTACCGCGAG AAATACA CTCTCAGGAAATACG    ATTCTTCGGCAATGA  66 81
       pipB2 1467588 .. 1467599 -    -3  -3.40403   GTTGTCTTACCATAA                CTAA ATCT TTAG                 CTGACATTTTTTTCT  46 446
IUJ39_RS07345 1464634 .. 1464652 -   -16  -4.36914   CCCGTCGCCAGAAAA             TGCCCGCC AGC GGCGGGCA             TAACCCATCAAAACG 100 33
IUJ39_RS07300 1451623 .. 1451648 - -16.1  -3.19425   AATGAAGTCTACTAA         GCCCGCACGGC ACAA GCCCTGCGGGC          TTTTTTGTGTCTGTC 100 421
IUJ39_RS07250 1445723 .. 1445733 -  -5.4  -3.62046   TCACCCTGTTAACAA                 GTTG CTA CAAC                 GCGCAGCTCCTGTCG  59 138
IUJ39_RS07235 NONE
IUJ39_RS07230 1441973 .. 1441995 - -13.5  -4.29325   GATTAACAGTTAAAA           TGCCGCCTT GTATG AAGGCGGCA           TTGATTTCATATTTA 100 178
IUJ39_RS07160 NONE
IUJ39_RS07155 1416885 .. 1416910 -  -4.7  -2.68719   CCAGGACATGAGAAC         GTGACGCAACAG ACT CTGACGC-TCAC         CTTTAACAGCAGCGG  45 243
        grpE 1412765 .. 1412800 - -12.6  -3.07522   ATATTCTCGAAGAGA    TCGTCGGCGACTTC-AC CAC GTCGATGTCGCCGACGC    TGGCGGAAGAGGTCA  79 364
         ffh 1409226 .. 1409257 - -14.4  -4.63218   CTTGTGTGAATAAAA      CACCGGGCCCCATC GAGG AACGGAGCCCGGCG       TCATATTAAAAGCCC 100 222
        rpsP NONE
        rimM 1408395 .. 1408405 -  -2.4  -3.33744   CGGTGGTTTAAAAAC                 CAGG ATC CCAG                 TCTACTTCGATAGTA  45 7
        trmD NONE
        rplS 1407124 .. 1407146 - -13.4  -4.93547   GCAACCAATTAAAAA           GGGGCCAGCA TAA TGCCAGCCCC           TTGTTTTCTACAAGC 100 66
        aroF 1403767 .. 1403783 -  -2.3  -2.52933   GGTCAATTCAGCAAC              CATAACA ACC TCTTATG              CGACACGCACCGCCA  39 21
        tyrA 1402613 .. 1402627 -  -7.8  -5.37593   CCTTAAACGAAAAAA               GCCAGC AGT GCTGAC               TTTCAGTATATACAT  95 46
IUJ39_RS07075 1401281 .. 1401307 -  -5.7  -4.67353   GCAGCGATGGAAAAA        GTCGCGCAGGCG AACT CTCC-GCGCGTC         GCGGCGCTCGGCAGT  75 400
IUJ39_RS07065 1399076 .. 1399092 -  -7.2  -3.74347   CTTATAAATTTTAAA              GCCCCG GTTAA CGAGGC              TCTAATTTCCTGGTT  68 118
        rluD NONE
        pgeF 1395423 .. 1395437 -  -5.7  -3.83998   CTACTGGAGATTAAA               TGAGG TCATC CCTCA               ATTATTCAAGGTAAA  61 98
        clpB 1392770 .. 1392787 - -10.5  -5.27335   GTTTTTAAACAAAAA             CGAGCCC ATCA GGGCCCG              TTTTATTCAAATTTG 100 45
IUJ39_RS07035 1390722 .. 1390736 -  -4.2  -2.55351   GGCCTCTAGACGAAG               GGGACT CAT AGTCTC               AATCGCAAGACGCCT  44 101
IUJ39_RS07030 1390580 .. 1390615 -  -9.2  -4.00532   TTTTTAAAGAGCAAA    TATCTCAAACGTGACT CGTA AGTCAGTTTTGAGATA     CTGATAGCAACGCCT  79 61
IUJ39_RS07025 1387546 .. 1387556 -  -4.6  -4.11484   CTCAATCCGCCAAAA                 CACC TTC GGCG                 TTGTAAGGTTAAGCC  61 30
         rrf 1387211 .. 1387230 - -13.6  -5.14477   CACAGACGCAAAAAA            GCCCATCC GTCA GGATGGGC             TCTTTCACTTGTTTG 100 43
IUJ39_RS07015 NONE
IUJ39_RS07010 1384742 .. 1384758 -  -6.5  -2.94032   ATCCTGTAATCAAAG              CCCCG TCCTGCT CGGGG              TTTTCTCTTAGGAAT  55 367
IUJ39_RS06975 1377845 .. 1377869 -    -5  -4.31433   CACGCCCAGAAGAAA          GGCGCAAT TATTGATCC ACTGCGCC          ACCATATTCTGAAAG  67 296
        grcA 1376559 .. 1376607 - -15.7  -3.51934   TTTTTCCGATAAAGA GACGTA-AAAAAACGGAAGACG TATAAG CGCCTTCCGTTTTTTATACATC AAGCCGATGTAATTC 100 48
        trmN 1374128 .. 1374146 -  -2.4  -4.44667   TGTTGCAACAAGAAA             TTGACG AGTATTA CGCCAA             CTTTCGCGTCTCGAA  63 194
        rseD NONE
        rpoE NONE
        rseA NONE
        rseB NONE
        rseC 1369506 .. 1369516 -  -6.8  -3.63744   TTTCCCTGTAAAACA                 CTGC AAC GCAG                 GAAAAGCGCAAGCTT  64 103
IUJ39_RS06915 1368207 .. 1368223 -  -3.1  -4.89339   AACCATTTAGAAAAA              TTTTACT TTA AATAAAA              ATGATAAGCTATATT  72 449
IUJ39_RS06895 1364089 .. 1364101 -  -5.5  -3.61232   GTCCTGATATAAACA                GCAGG CAG CCTAC                CAAAGCATGTTCTTG  59 467
        lepA 1362036 .. 1362048 -  -3.4  -3.64609   CAGAATCAGGGCAAA                CATG TTCGC CATG                CCAACTCCTTAGGGA  51 41
        lepB 1361023 .. 1361055 - -13.6    -4.015   TTATCGAGGAAATAA     TTCACGCTGCCG-CT AAAA AGACGACAGCGTGAA      CGATCATTTCGCCAC 100 43
         rnc NONE
         era NONE
        recO NONE
        pdxJ NONE
        acpS 1357216 .. 1357244 -  -6.7  -3.29263   ACAGTTGTGGGATAA        GTTTGTCCTCATG CAT CACGCGGATAAAC        TCCAGGCCAGTTAAC  61 120
        murQ 1354702 .. 1354725 -  -2.4  -3.91798   CAATTGTTAAGGAAA          TGCCAAAGGT AATT ACCTTCACCA           CCTTCCAGTAGCTGA  53 376
        yfhb 1353927 .. 1353939 -  -4.1  -2.78384   GCGGGCGGCATTATA                CACAG ACG CTATG                CTTTTCACTATTCGA  45 33
        tadA 1353075 .. 1353085 -  -3.2   -4.7629   CTATTAAGTCAAAAA                 CCGT ATT ACAG                 TAAGTTAACCTACGG  71 332
        purL 1347212 .. 1347242 - -19.9  -2.88544   GGGGAGCGCCAGATA       CAACAAAGCCGGG TTTAG CCCGGCTTTGTTG       TGGAATAAGGCGGTG 100 452
        qseE NONE
        qseG NONE
        glrR NONE
        glnB 1343005 .. 1343015 -  -3.2  -4.15044   TCGTCGCGCAACAAA                 CAAC GGA GTCG                 CAAATTAGTGATACG  60 224
IUJ39_RS06760 1333140 .. 1333177 - -12.7  -2.73441   CAGGAGCGCTCAAAC   CGCAACGCCGCCGGA TAATGGCT TCCGGCGGCGTCATG    CTATTGTGCGTTCAG  82 91
IUJ39_RS06755 1331774 .. 1331786 -  -4.7  -4.56597   CTGGCGTTTCAAAAA                GAGGG ATG CCCGC                GCGGCGTCGCACTCA  70 148
IUJ39_RS06745 1329877 .. 1329892 -  -3.3  -2.62111   TGGGGAAAAAATTAC              TGACA TTGCAG TGTCA               CCGTTTGGGCAAACT  42 6
IUJ39_RS06740 1328674 .. 1328691 -  -4.1  -4.42619   GAAGAGGTGATAAAA             CAGGTGA TCGT TAACCTG              TATGAGTTTGAAAAA  65 230
        trmJ NONE
        iscR 1323253 .. 1323276 -  -2.4  -2.72144   TCATTGCTCTTAAAC          TCCGTACATC ACTC AATGCAAGGA           ATCAGGCAACCGGCT  40 171
        iscS NONE
        iscU NONE
        iscA 1321026 .. 1321052 -  -8.7  -4.32177   GCATGTCAGAACAAA        CCCCACACGCAG GCGA CCACG-GTGGGG         TTATACCTTCTTACT  84 234
        hscB NONE
        hscA NONE
         fdx NONE
        iscX 1317841 .. 1317862 - -15.1  -3.72576   TTCCTTCTTAGCAAA           CGGGCCGCC GTAT GGCAGCCCG            TCAAAACTCTTTGCT 100 230
        pepB 1316472 .. 1316510 - -11.6  -3.30124   GTGTAGGCCTGATAA   GCGAAGTGTCATCAGGCA AAA TGCCGGGTGGCGCTTCGC   TTACCCGGCCTACAA  83 50
        sseB 1315346 .. 1315361 - -10.4    -5.626   CAGGCCACAAAAAAA              CCGCTC AATT GAGCGG               TTTTTTTGTGCTGGT 100 316
IUJ39_RS06650 NONE
        pbpC 1306799 .. 1306822 -  -5.4  -3.55563   ATCCGACTCGTCAAA          TAAAAACACA TTCT CGCGTTTTTA           TGCGCAGGCTCTCTT  57 147
IUJ39_RS06640 NONE
        dmsB NONE
IUJ39_RS06630 NONE
IUJ39_RS06625 1302078 .. 1302088 -  -2.6  -3.09878   TGGATGCAGGTAACA                 TTTT TTT AAAA                 TAAAATGAGTATTAG  43 50
         ndk 1301449 .. 1301481 -  -3.4  -5.04249   GGTTGAAAAAAGAAA     CGCCC-CGG-TGAG TTTGCTG CTCGTCCGGGGGCG     CTGCATTGTACAAAT  74 105
IUJ39_RS06615 1300183 .. 1300222 - -12.3  -2.55544   GCATTATTCAACTGA  CA-TTGCGCCACGGTATA ATGAA TGCACCGTGGCGCAACTG  CTATCAAATAGCCTT  81 29
        rodZ NONE
        ispG 1297739 .. 1297785 -  -5.8   -5.0916   TTCTGAATATAAAAA TGAACCCTCAGCGCTTCCCCG AACGAA CCGGG-AGCCATGCGGGTTCA ATCATACACGGGAAG  80 63
        hisS NONE
IUJ39_RS06595 NONE
        bamB 1294568 .. 1294588 - -14.7  -4.60746   TTAAAAACAGGAAAA            CGGCCCCTA CAC CAGGGGCCG            TTTTTTAAAACGCAC 100 52
         der 1292976 .. 1293005 -  -7.9  -3.17723   CCACGTTTAATCTAA       TGGCCTGA-AAACG CTA CGCTTATCAGGCCT       GGAATATTACTGAAA  64 46
IUJ39_RS06580 1292605 .. 1292618 -  -6.7  -5.14949   AATAAAACAATAAAA               TACCC CGCC GGGTA                GAACGACTATGCTGA  84 123
        guaB 1287964 .. 1287987 - -13.9  -4.56113   AACAGATTAAATAAA          TCGCCCGAC GCGAAG GTCGGGCGA           AGAAAATCAGGAGCC 100 32
        guaA 1286279 .. 1286298 - -12.2  -5.42975   GTACATAAAGAAAAA            CCCTCTGT AAGA ACAGAGGG             TTAAATTCACTTTTA 100 74
IUJ39_RS06505 1275893 .. 1275904 -  -5.8  -3.59738   TATCAGACGCTTAAA                CAGC AGTT GCTG                 GACGTCCTGCCGGTG  59 353
IUJ39_RS06495 NONE
IUJ39_RS06490 1274637 .. 1274649 -  -6.9  -3.01712   CGCTTTCGGTCAACA                CGCCG GGA CAGCG                TTAACTAGCTGTTAT  58 293
IUJ39_RS06480 1274139 .. 1274150 -  -4.4  -2.90797   GCGATATACATCATA                CGAT AGTC ATCG                 ATTGTAATTATTAAA  48 20
IUJ39_RS06475 1271725 .. 1271735 -  -3.2  -4.41633   GATCTGGAAAAAGAA                 CAGC AGT ACTG                 GGGAGCGGTGACTGG  62 125
         upp 1265250 .. 1265268 -   -11  -5.81412   TTTATTCAAAAAAAA             GCCGACTC TTA AAGTCGGC             TCTTAATTATTTATT 100 44
        uraA 1263882 .. 1263902 - -18.3  -3.70722   TCCATCAAGATAGAA            CCGGGCAGC ATC GCTGCCCGG            CAACCTGTTACTGAT 100 33
IUJ39_RS06440 1262805 .. 1262817 -  -2.6  -3.36823   CCTGCTAAAATCTAA                CGGC GTGGA ACCG                GAAGTGGTGCTTTAT  45 322
IUJ39_RS06425 1259822 .. 1259841 -  -9.3  -5.29445   TTCCAACAATAAAAA            TGCCGCA ATACGG TGCGGCA             TTAAAAAAAAGATCG 100 134
IUJ39_RS06420 1258423 .. 1258447 -  -2.8  -3.00022   TCGACGTCATATACA         GCGC-CTCCTT TAAC ATGGAACGCGC          AGTATGGGAAAGCCA  43 63
IUJ39_RS06415 NONE
IUJ39_RS06410 1255953 .. 1256003 - -18.4  -5.07652   CTGGCTAAAAGAAAA CGCGTAACACCTCTCAGGCCGCG TATCAG CGCGACCTGAGAGGTGA-AGGCG TCAGGCTTGCCGCGC 100 26
        dapA NONE
        bamC 1252815 .. 1252834 - -11.4  -5.31275   TCTTATCAGAAAAAA            GGGCCGGA TTGT TCCAGCCC             TGTTAAATTACTTGT 100 33
IUJ39_RS06385 1251909 .. 1251930 - -11.5  -2.90054   GAGGAAAGGATGATA           CCGGAGAGC GGTT GCCCCCCGG            TCAGAAGCGGAATTA  78 38
IUJ39_RS06380 1250929 .. 1250940 -  -2.2  -2.64735   AGCGCATCGATATCA                GACA TCCT TGCC                 CCGATTGATCAAAAG  39 34
        tmcA 1248896 .. 1248927 - -10.1  -3.05228   AAAAGTAACCAGAGA      CCGTGCCGGAAAG TTATCG CTATCCGGCATGG       TTCTCACCGCCGGGC  73 13
        ypfM 1246640 .. 1246660 -  -8.3  -5.24531   ATCGGGCACAAAAAA            GGCGACT TTCGTTG AGTCGCC            TTTTCTTATCCCCTA  95 51
        aegA 1239365 .. 1239391 -  -3.8  -3.64755   ATATATTCTGAATAA         TTCAATTTGC CGCATAT GCAAGTTGAA         GTATGAGGAGTATAG  53 87
        nudK 1237980 .. 1237991 -    -3  -3.53012   TCTTTTTTGTGTAAA                GAAA TATA TTTC                 TTTTTTTTCAGTCCA  48 33
IUJ39_RS06325 1236835 .. 1236850 -  -5.4   -3.0701   ACAACCGTGATTCAA              CGC-GTG ATC CACAGCG              TGGGCCAGGCATCCG  52 6
IUJ39_RS06320 1236380 .. 1236397 -  -3.4  -4.87273   AATATTGTAGAAAAA             GCTC-GC CGGGT GCTGAGC             ATGAAAGGCTAAGAA  69 100
        maeB 1230849 .. 1230866 - -12.7  -5.24129   GCGGCGCATAAAAAA             GCGCAGG AGAA CCTGCGC              CAGAAGAGAGTAATG 100 46
IUJ39_RS06300 1228740 .. 1228758 - -12.4   -2.5155   GATAAGTAAAATTAG             CCCGCCTC GTA AAGGCGGG             TTATTCATATATCAC  81 44
        eutS 1226843 .. 1226857 -  -2.9  -3.15861   CATTACCGCCACCAA               TTAAC TTTTT GTTAA               CTCACACAGGGTGAA  45 11
        eutP NONE
        eutQ NONE
        eutT NONE
         pta 1223852 .. 1223869 -  -2.6  -2.83403   TTCCTCTCATTAAAG             GGGTCC AGAACG GGACCG              TTCATTCAACCAGTG  41 42
        eutM NONE
        eutN NONE
IUJ39_RS06255 1221733 .. 1221743 -  -6.8  -3.48924   TCATCCCTTATACAA                 TGCG AAA CGCA                 TCCACCAATACACAA  62 7
        eutJ NONE
        eutG NONE
        eutH NONE
        eutA 1217018 .. 1217035 -  -4.1  -2.58544   CTTTAGTTTCATAAG             TCGTTCC CTCA GGAAGGA              AATGCGAGTGATTTC  44 16
        eutB NONE
        eutC NONE
        eutL NONE
        eutK NONE
        eutR 1211970 .. 1211988 -  -5.9  -3.14564   CTACTTCTTCATTAA             GCACCGC AACGA GCAGCGC             GGCATTGGCGGATTA  54 499
IUJ39_RS06195 NONE
IUJ39_RS06190 NONE
IUJ39_RS06185 1208794 .. 1208811 - -11.3  -3.68359   TCCTGAAAATGAGAA             TGCCACG CAGT CGTGGCA              TTAATGGAGGCTATT  87 81
IUJ39_RS06180 1207752 .. 1207773 -  -4.4  -4.14472   CCAATATGTTTAAAA           GTGGCC TGATGCCTGT GGCCAC            TTACGGTTGGGTAGT  62 125
        murR 1201305 .. 1201321 -  -6.6  -3.01712   GTCTCCTTTTGAATA              TGGAGT CTTAC ACTCCA              TTAACACTGAAAATA  58 104
        ucpA 1200453 .. 1200479 - -10.9  -3.84992   AAGGGAATAAGAGAA         TCCCTCCCCAC GCTGA GTGAGGAGGAA         ACCGACATCAATCAG  85 37
IUJ39_RS06140 NONE
        cysT NONE
        cysW NONE
        cysA 1196479 .. 1196502 -  -7.4  -2.62244   CTGTCCAACAAAATT          CCCGGTGACGC TTC GCTT-ACCGGG          CGAGAAACAGGAAAA  57 49
        cysM 1195530 .. 1195546 -  -7.3   -4.4017   GTAAGCCTGATAAAA              CGCCATA TAA TATAGCG              TTAAATTCCTGCCCC  77 26
        pdxK 1192482 .. 1192497 -    -4  -2.56164   TGGCGAACCACCAAC              CGATAA CTCT TCATCG               CGCCTCCCCTGCCGG  44 20
IUJ39_RS06100 1192141 .. 1192158 - -12.7  -3.67597   TGCCGCAGTGAAGAA             TGGCGCC GATT GGCGCCA              TTTTTTTATCCGTTG  95 123
        zipA 1185997 .. 1186013 - -10.8  -5.38249   ATCAATGATAAAAAA              CCCCCG ACAGG CGGGGG              TTACGTTAAAAATGT 100 57
        ligA NONE
IUJ39_RS06060 1183557 .. 1183586 -  -4.1  -5.40072   GCGGTTCGAAAAAAA       GTCTGGCCAACGG GATT CCGATGGCCAATA        TCCTGTTTCCGACGT  86 177
IUJ39_RS06050 1181567 .. 1181581 -  -9.2  -5.17576   CACCAATGTAAAAAA               GCGCCC TAA AGGCGC               TTTTTTGCTATCTGC  93 171
        gltX 1179443 .. 1179471 - -13.3   -4.2602   CAGACTAACAAATAA        TAAACGGCAGG CGTCTTC CCTGCCGTTTA        TTCTGTTTCAGCTCG 100 43
IUJ39_RS06010 NONE
IUJ39_RS06005 1178235 .. 1178254 -  -8.5  -5.31158   GAAAAAAAGCAAAAA            CCCCCGC GTTACA GCGAGGG             TTTGAATGTTGGTGG  95 35
IUJ39_RS06000 1175855 .. 1175869 -  -8.5  -3.91897   TTTTTCATTCAGAAA               CCGGG GATAT CCCGG               TTTTTTTATGCCGCT  76 40
IUJ39_RS05990 1172992 .. 1173016 -  -8.6  -3.38812   TTCTGCTGAATAACA         GCCCGATGACA GAAA CG-CATCGGGC          CTGCTATCTTTTCAG  69 44
IUJ39_RS05975 1169316 .. 1169328 -  -4.8  -4.29929   ACGAAATGCAACAAA                TGGC GTTTA GCCA                GACGCTGGGCGCGGG  67 400
         glk 1167168 .. 1167184 -  -9.4  -5.79526   ACAGGCGAAAAAAAA              CCGCGT AAGGG ACGCGG              TTTGAGGTTACTAAT 100 119
IUJ39_RS05960 NONE
IUJ39_RS05955 NONE
        ypdF NONE
        ypdE 1163283 .. 1163293 -  -5.4  -3.57144   TCCTTTAGCGCGAAA                 TCAG CAC CTGA                 AATCCGTCAGGCGAG  59 15
        ptsP 1160690 .. 1160739 - -12.3  -3.53444   GGATGGCGGCGTAAA CGCCTTATCCGGCCTACAT TATCACTCGTGC GTGTAGGCCTGATAAGGCG TAGCGCCATCAGTCT  93 52
        alaC 1157955 .. 1157973 - -14.6  -5.00642   CAATGCAGAGAAAAA             CAGGAGCC CGG GGCTCCTG             TTTGCTTTTCTACTC 100 35
IUJ39_RS05915 1155661 .. 1155679 - -12.4  -4.21812   TCCCAGGGAAAATAA             GCGCCGAC GTT ATCGGCGC             TATCTATTTACTGAC 100 51
        pgtE 1151351 .. 1151386 -  -7.5  -3.54424   TTGCAGGTTCGCAAA    GAGTGGTCATCGGCC TGTTTT GACCGATGACATCCC     TCTGTGGTCTAGAAG  65 34
IUJ39_RS05875 1147762 .. 1147774 -  -7.7  -4.17316   ATGGCGTTAAAATAA                CGACT ATG AGTCG                ACCGGGGGTTGCGCC  76 16
IUJ39_RS05865 1145285 .. 1145300 -  -3.2  -4.62872   ATCAATCGGGAAAAA              GCTACG CCGC CGCAAC               AGTCAGGTAATTCGT  66 318
        fumD 1135270 .. 1135295 -  -2.5  -3.86346   TGATGGTGCGACAAA         GCTCAACCTTT CTCA AAAAGATGTGC          ATGAAATAATCAAAA  54 354
IUJ39_RS05740 1133499 .. 1133513 -  -2.8   -3.1247   AGCGTTGATACTTAA               CTTGCT GCC AGTAAG               TCGGCTAAATCAGGA  43 7
IUJ39_RS05735 NONE
IUJ39_RS05730 NONE
IUJ39_RS05725 NONE
IUJ39_RS05720 1130693 .. 1130714 -  -5.1  -5.27335   TCCCCCAAATAAAAA           GGCCTGC-GA TTA CCAGCAGACC           TGTTACTAACTCAAT  82 52
IUJ39_RS05715 NONE
IUJ39_RS05710 NONE
IUJ39_RS05705 NONE
IUJ39_RS05700 NONE
IUJ39_RS05695 NONE
IUJ39_RS05690 NONE
IUJ39_RS05685 NONE
IUJ39_RS05680 1127970 .. 1128020 -    -7  -5.65927   GACCCAAATAAAAAA TCCCGAAACCGTTATGCAGGC TCTAACTATT ACCTGCG-AACTGTTTCGGGA TTGCATTTTGCAGAC 100 239
IUJ39_RS05675 1127875 .. 1127887 -  -4.8   -3.6608   ACCATTGGAGCTAAA                CCAG CATAT CTGG                CGGGACAGCGTGGAC  57 23
IUJ39_RS05670 1127759 .. 1127771 -  -4.1  -3.51597   AAGGCCGAAGCATAA                CCATC ACT GATGA                ATTCAGGATAACCAG  52 58
IUJ39_RS05665 1127094 .. 1127131 - -10.7  -2.75382   CATCGCATTTAACGA   CCATTAATGGATGCACT CATA AATGCATCCTGTAATGG    GAGTTCTTAATTAAT  74 44
IUJ39_RS05660 NONE
IUJ39_RS05655 1126186 .. 1126196 -  -3.2  -3.42996   TACGACTCACGATAA                 GAAC AGC GCTC                 TTTCTCGCCGCCTCC  50 6
IUJ39_RS05650 1125651 .. 1125667 -  -2.1  -3.57627   TGCGGATATAAAAAC              GCCCAGC ATT ACGAGGC              ATTTTCCTGAAAGTC  49 68
IUJ39_RS05645 1125245 .. 1125255 -  -6.8  -2.71364   TTATCGTCTGAACCA                 GTGC GAT GCAC                 GGTCAAGTGGAATAC  55 0
IUJ39_RS05640 NONE
IUJ39_RS05635 NONE
IUJ39_RS05630 NONE
IUJ39_RS05625 NONE
IUJ39_RS05620 1119524 .. 1119539 - -11.8   -4.2123   TATTCACCCAATAAA              GCGGCC CGCA GGCCGC               AGCAGGTTTTATGCG  95 34
IUJ39_RS05615 NONE
IUJ39_RS05610 NONE
IUJ39_RS05605 NONE
IUJ39_RS05600 NONE
IUJ39_RS05595 1117830 .. 1117843 -  -9.5  -5.63517   TCCTGAAATAAAAAA               CCCGC CGGA GCGGG                TGGTATGGTTTAGGT 100 45
IUJ39_RS05590 1117102 .. 1117117 -  -3.2   -2.9138   GATTAAAGAAGATGA              GTTACG CCAC CGTTAC               TGTACAGGTTGATGA  44 11
IUJ39_RS05585 NONE
IUJ39_RS05580 1116359 .. 1116373 -  -2.1  -3.34517   ACCTTCCCCTAAACA               TCACC AATGA GGTAA               ATCCTATTATCTTAC  45 51
IUJ39_RS05575 1115986 .. 1115997 -  -7.2  -6.02919   CCAGAAACAAAAAAA                CCGC CGAA GCGG                 TTTGTATTATTATTT 100 35
IUJ39_RS05570 1112565 .. 1112588 -  -9.6  -2.72991   TCACATCCTTAATCA          TGGGAGTGTT AATA AACACTCCCT           CTTTTTTATCTAAAG  69 86
IUJ39_RS05560 1111536 .. 1111547 -  -4.4  -2.80575   AAAAGGGGGAGTACA                GCAT TAAA ATGC                 CTCCTCAAGCTCCAG  47 17
IUJ39_RS05555 NONE
IUJ39_RS05550 NONE
IUJ39_RS05545 NONE
IUJ39_RS05540 1106858 .. 1106871 -  -3.1  -3.07013   TATTTCCTCAATACA               TATCC GGAA GGACA                AGAATTGGCATATTG  45 4
IUJ39_RS05535 1105490 .. 1105506 - -12.3  -3.46602   CTGGTTAGATGATAA              GGTGGCA TGA TGCCACC              AAAGCAAATTATGAA  93 90
        mlaA 1102006 .. 1102024 - -14.6  -4.86773   GAAAAGGATCAAAAA             GGTGAGCG TAA CGCTCACC             TTTTTATTTACTGCC 100 43
IUJ39_RS05505 1099971 .. 1100009 - -10.3  -5.56264   GGGAAACATAAAAAA   TGAAAACGCCTCCGCCA GACGA TGACGGAGGCGTCGTTA   ATGAACGGATTAACG 100 35
        fadI NONE
        fadJ 1096250 .. 1096263 -  -3.1  -4.56597   TGGCTGTGGCAAAAA               TG-CGG TGG CCGGCA               TTGTGCCTTATCCAT  64 151
        sixA 1095525 .. 1095547 -  -7.6  -2.71364   TCAGGCGCCGAAGGA           GTACGGCGGC GAC GCCGCGCTAC           TGGTGCTGATTGAAG  57 173
        prmB NONE
        aroC NONE
        mepA NONE
IUJ39_RS05465 NONE
IUJ39_RS05460 NONE
IUJ39_RS05455 1090295 .. 1090320 - -12.5  -2.77256   GTAACGAAACAATAG         CGGAAGGCGGC GAGC GTCGCCCTCCG          GCTTACGGCGTTATT  82 39
        fabB 1086781 .. 1086798 - -12.7   -4.8269   GAGAAGTATTAAAAA             GGGAGCC GACA GGCTCCC              TCGAAGATTGGTCAG 100 131
IUJ39_RS05425 1084774 .. 1084790 -  -2.9  -3.30453   CAGAATGCAGAGTAA              GGCGG GGAAATG CCACC              CCCCTCTACCTGAAC  46 162
IUJ39_RS05420 1083325 .. 1083339 -  -8.6  -3.45324   CACGGCGATCAAAGA               GTATGC GCA GCATAC               GTATCAGATTCAACC  67 257
        pdxB 1081292 .. 1081308 -  -4.3   -4.4009   GTTTACTCCAGAAAA              GCGTGAG CTC CCCACTC              AGGCAGGGAGCGATA  66 50
IUJ39_RS05405 1080262 .. 1080279 -  -4.1  -2.62184   TCTGTCCGGACATCA             GTACAGA TACT CCTGCAC              CAGCTTCTCCGCAGT  44 5
        truA NONE
IUJ39_RS05395 1078631 .. 1078657 -    -3  -3.51825   TCAGCTTAATTATAA        GGGGCGCATAA TGCCAT TTTTGC-CCCC         AACAGACCATGAATG  48 107
        accD 1077637 .. 1077669 - -17.1  -3.06515   CTTTACGGTGAAAAG      CAAAAGGGCAGAGCC TGT GGCCCTGCCCTTTTC      AGTTATCAGGCCTCA 100 31
        folC NONE
        dedD 1075593 .. 1075617 - -10.8  -5.27335   GCGCGTAAATAAAAA          TGGCGCTGAA AAATA TTCAACGCCA          TCACACTTTTTATCT 100 107
        cvpA NONE
        purF 1073413 .. 1073441 - -14.5  -3.75153   GGTGCGTAATTGAAA        CCGGCCAGCGGCG CGA CGCCGCTGGCAAA        ACCTATTAACCTTCG 100 31
IUJ39_RS05360 NONE
IUJ39_RS05355 NONE
IUJ39_RS05350 1067727 .. 1067752 -  -7.4  -2.84192   GACATCAGCAGCAGA         TGCCGCCGCG ACACAG CGCGGCGGTT          ATGCGTTAACGCGTA  59 31
IUJ39_RS05345 NONE
IUJ39_RS05340 1065744 .. 1065762 - -13.2  -4.37092   ATCGCGGTTACAAAA             TTGCCCTG AAA CAGGGCAA             CAGGGACAACATTGC 100 58
        argT 1064667 .. 1064686 -  -2.2  -5.53991   TATGCACCAAAAAAA            TGCAAAAT ATCT ATTTTGTA             CCGTGATAGTTCCCA  81 65
        hisJ NONE
IUJ39_RS05325 NONE
        hisM NONE
        hisP 1061234 .. 1061246 -  -9.1  -4.07568   CGGGCGTTGCCAAAA                CGGCT TGA AGCCG                CCGGATTCGCGTTTC  81 125
        yfcF NONE
        yfcE 1058252 .. 1058266 -  -3.5  -3.44222   TAAATTACGAATTAA               TCGCG ACCTG CGCAA               TGATACTTTGATCAT  50 0
        yfcD 1057569 .. 1057598 - -12.3  -3.74626   ATTAAATCAGGGAAA       CTGGA-GCGATAGA AAA TCCATCGCTTCCAG       TTTATGTATGCGGGA 100 56
IUJ39_RS05280 NONE
IUJ39_RS05275 NONE
IUJ39_RS05270 NONE
IUJ39_RS05265 NONE
IUJ39_RS05260 1052328 .. 1052356 -   -14  -4.20084   ATCATTGATCCAAAA       TGCCGGATGA-GC ATCA GCGTCATCCGGCA        ATATCTCCATGATTA 100 38
IUJ39_RS05240 1046318 .. 1046337 - -10.8  -5.53991   TAGCGATGAAAAAAA            GAAGGCAT TGGT ATGCCTTC             TTTTATATGCGTAAT 100 51
IUJ39_RS05235 NONE
IUJ39_RS05230 1045088 .. 1045105 - -14.1  -2.70946   TTCTGCCATAAATAT             GCCCCGC CAGA GCGGGGC              GATATCATGATCAGG  87 36
IUJ39_RS05225 1042820 .. 1042830 -  -3.2  -5.10497   AAGCCATTGAAAAAA                 TCGC TCA GCAA                 AAGTTGGTTGATATG  77 408
        lrhA 1039280 .. 1039313 -  -8.2  -5.47821   ATGGACGCAAAAAAA     GAGCCGCTAAACGTT TTTTC ATCGTC-AGCGGCTC     TTTTTTACATTTACG 100 64
IUJ39_RS05205 1038963 .. 1038975 -  -2.6  -4.37886   CCATCCTGGAGAAAA                GGCC TACCC GACC                AGGAGGAATTTTATG  60 158
        nuoA NONE
        nuoB 1037583 .. 1037597 -  -3.5  -2.95093   ATAGGCGAAGTAAAG               TGCCG CTGCC CGACA               GGCGCAAATTAAATC  44 34
        nuoC NONE
        nuoE NONE
        nuoF NONE
        nuoG NONE
        nuoH NONE
        nuoI NONE
        nuoJ NONE
        nuoK 1028718 .. 1028733 -  -2.5  -3.18199   TAATGGTTAAGGCAA              GCATG TTCATC CACGC               ATCTCACTTACTGAA  45 16
        nuoL 1026848 .. 1026864 - -15.1  -2.89564   TTCTTAGTTCACAGA              CCCGGCG CAA CGCCGGG              TATATTCACTCAGCC  89 47
        nuoM NONE
        nuoN 1023624 .. 1023641 - -11.3   -5.8187   CAGGCAATAAAAAAA             CCCGCTT CGTG AAGCGGG              TTTTTCTTTTTACTT 100 46
IUJ39_RS05125 NONE
        elaB 1020571 .. 1020587 -  -6.5  -4.56597   CCTCCCTGTTAAAAA              CCCCACA TTA TACGGGG              TACTGCCCTAAAAAA  76 90
        menF NONE
        menD NONE
        menH 1016757 .. 1016767 -  -5.4  -3.41125   GTCAGAGACGCAGAA                 TCTG AGC CAGA                 CTGTCTACTACGCCA  56 1
        menB NONE
        menC NONE
        menE 1013481 .. 1013495 -  -2.1  -3.28447   TTATTGATCACAACA               CGTTA CACAT CAACG               GGTAAACAAAACGGC  45 75
        pmrD 1013056 .. 1013070 -  -4.2  -3.24146   CGCGTTAAGCAAAAC               CTATGC GCT GCTTAG               TCTCAGCTACGCGCT  48 145
        pmrG 1008919 .. 1008946 -  -8.5  -3.41795   AAAGGGCTATTATAA        TAACGACAGCC GCCTCA GGCTGTCTTTA         CACTTTTATCATTCC  69 43
IUJ39_RS05050 1007643 .. 1007662 - -12.8  -2.52529   GAGAAGGAGGAATAT            GGCGCGAC GATG GCCGCGCC             GTTAGCATCAGAAGC  81 33
IUJ39_RS05045 1006329 .. 1006349 - -11.2    -3.762   AAACCAATTTAAGAA            TGGGAAGG TCAGG CCTTCCCA            CTGAAAATTCTATGC  91 35
        glpT NONE
        glpQ  997985 ..  998004 -  -7.8  -3.85817   AGGGCTTGCTATAAA            GCACCACC GCCT GATGGCGC             TACGCTTATCAGGCC  71 120
IUJ39_RS05005  995702 ..  995727 - -16.3  -3.86897   TCCAGCCGGGAGAAA         TTTTGCCCTGC TGCT GCAGGGCAAAA          GGCGATATCGAAATT 100 51
        gyrA  988066 ..  988083 - -14.1  -5.64421   ACGGCAAAGAAAAAA             GGGCCGG ATAT CCGGCCC              TCGCACAGCAATAGC 100 42
        rcsC  984804 ..  984842 -  -6.7  -4.36914   GTCTGCTGGAGAAAA  TCAGCG-CAGGCGGCTAC GGCG ACAAACGCCTGTCGCCGA   AAGAGAGCGAAGTAT  75 318
IUJ39_RS04960  979796 ..  979809 -  -9.5  -5.18357   CAAGGTATGAAAAAA               GGGCC CGCA GGCCC                TTTTAGCAACATCTT 100 49
        apbE NONE
         ada NONE
        alkB NONE
IUJ39_RS04940  974738 ..  974764 -  -6.6  -3.63968   GTTGAAATGGGCAAA        GGCC-GCAGTCG CGTCT CGAC-GCTGGCC        GCCGGCGTAGTGTTG  63 360
        napF NONE
        napD NONE
        napA NONE
        napG NONE
        napH NONE
        napB NONE
        napC NONE
        ccmA NONE
        ccmB  965600 ..  965626 -  -5.2  -2.57298   AAACGAATGAAAACC        GCGCTACTGCA GACTGA TGC-GTAACGC         TGCCGCCGTCGCAAA  48 2
IUJ39_RS04880  964816 ..  964830 -  -2.1  -2.80796   CTCCACGATGCAAAT              GCC-GT ACTC ACTGGC               GCCCCCTTTTCAGTA  40 18
        ccmD NONE
        ccmE NONE
IUJ39_RS04865 NONE
        dsbE NONE
IUJ39_RS04855  960560 ..  960610 - -18.4  -3.73068   CGCGGAATGTAATAA CCGCGGCGACGCGGCTTATCGGA TCAAGG CCCGGTAAGCCGCGTCACCG-GA CCGTCAGGGCATTAT 100 37
        yejK  955250 ..  955289 - -26.8  -4.14392   GCGTAATCGCCAAAA  GGGCATAAAAAACTCCGC TTCG GCGGAGTTTTTTATGCCC   TTTTTTGGCCTCGGT 100 134
        rsuA NONE
IUJ39_RS04805  951000 ..  951030 -  -6.7  -2.64933   CATTGAGGGACACTA       CGCCAGTCACCGC TTTTT GGGACGGCTGGCG       TGGAGATAAAACAGA  55 1
IUJ39_RS04800  950252 ..  950285 -  -6.8  -3.02013   ACCGCAACAAGCATA     TACGCGTCAGCT ACTTGCGTTA AGCTGACGCTTA      AAAAGGATTATTGTT  58 23
IUJ39_RS04750  937971 ..  937996 -  -4.9  -3.96337   TCAAAAACTATTAAA         TTATTTATATC GATC GTTATAAATAA          TTAAAATCGATCAAA  61 294
IUJ39_RS04745 NONE
IUJ39_RS04740  936661 ..  936674 -  -2.3   -3.5394   AAACGGCTGGGGAAA               CGCCT GTTA ATGCG                CATCGCCGTTGTCGC  47 416
        fruB NONE
        fruK NONE
        fruA  931531 ..  931541 -  -6.8   -4.7189   AAAAGACAGAGAAAA                 TCCC TCC GGGA                 GCAGTGATCAATCAG  79 161
        rihB NONE
IUJ39_RS04705  928205 ..  928243 - -11.1  -2.84586   CGCAAAACGCAATCA  CATGCCGGATGGCAACGC CAAA GCATC-CTATCCGGCATG   ACTTATCATTACGCA  75 14
IUJ39_RS04690  925121 ..  925134 -  -3.7  -4.80882   AGCGGAGACTAAAAA               TGGCG ATAC CGCCG                GGGCTGCCCTTCTCT  71 47
        lysP  923402 ..  923419 - -11.3   -5.8901   AGATAAAACAAAAAA             CCCTCTC GAAT GAGAGGG              TTAGAAGGGTCAGGT 100 103
        cirA  921120 ..  921154 - -16.4   -2.5294   CATCGTTTATAACAT     TCTGGCGACAGCGGCA AAA CGCGGCTGTCGCCAGT     CTCTGTCAGAAACGG 100 31
IUJ39_RS04665 NONE
IUJ39_RS04660  916774 ..  916784 -  -2.4  -3.86194   AAGCCGCGCGACAAA                 CCGC CTG GCCG                 ATGACGCTACGAATC  54 137
        folE NONE
IUJ39_RS04645  913838 ..  913850 -  -3.4  -3.86346   GGACTGCGTGAGAAA                CATC ACAGG GATG                GAAACGGTTACAGCC  55 69
        galS  912676 ..  912693 -  -6.3  -4.21989   CACAATGTTAATAAA             CTGTGAA TTTA CTCACAG              ATTGAAAACGGTTAC  70 54
        mglB  911327 ..  911349 -  -6.2  -2.70932   CGGCCTTTTTAATTA           TTGCTATCCG TGC CGGATGGCAG           AGGAAATACCTTATC  53 108
        mglA NONE
        mglC  908412 ..  908461 - -10.8  -3.33003   GAATATAACGAGGAA CGCC-CGCATAGCTCACCTGGCGG CATA CCGCC-GGTTACCTATGCAAGGCA AAAACTGGCCGGAGA  76 316
        ccdA NONE
        dusC  892768 ..  892784 -  -2.9  -3.55444   CCTTCATCGGTTAAA              CGCCG CCGTGTC CAGCG              AAACAGCAGATGGCT  48 230
        mdtQ  891083 ..  891098 -  -3.2  -2.71011   ACCCTGTCTGAATCA              TCCGGA AAAA TCAGGA               ATGATAACCGCCGCC  43 20
IUJ39_RS04505  890243 ..  890257 -  -8.5  -3.32963   ATCCGGATGGCATAA               CGCCG CCATC CGGCG               CCCGGCGTTTATTTC  69 34
IUJ39_RS04495  888823 ..  888843 -    -9  -2.79302   AGCAGTGGCATCATA           GCGGC-ACG CCAG CGTTGCCGC            TACAGAAGAATCGTC  66 84
        pbpG  887609 ..  887627 -  -3.7  -3.88787   GGACATCTGTATAAA             GCGCCGG AAACG CTGACGC             GTTTTTATCGGCAAA  58 188
        bglX  883412 ..  883434 -  -6.2  -4.15854   AAAGTCATTGCAAAA           CAGGGCGC CGATATC GTGCCCTG           TTGACGGCAGGCTTA  70 38
IUJ39_RS04475 NONE
IUJ39_RS04470 NONE
IUJ39_RS04465 NONE
IUJ39_RS04460  879301 ..  879311 -  -6.8  -4.37092   ATGGTGCGGAGAAAA                 CCAG ACG CTGG                 CGCAGCAGCAGCAAC  75 238
IUJ39_RS04445 NONE
        btsR NONE
IUJ39_RS04435  875101 ..  875118 - -12.7  -3.14462   TGAAATAAACAACCA             GCCGGAG CATG CTCCGGC              TTTTTTATCAGGTTA  86 411
        apbC  871760 ..  871792 - -15.1  -2.89564   TTTCCATTCCATATA      TTCACCACATCAATA TAT CATTGATGCGGTGAA      TAAGATTTAACGCCA  89 45
IUJ39_RS04415  871214 ..  871243 - -14.5  -5.64421   ATCGCAAATAAAAAA       GCCTCTATCATTC ATTA AAATGATAGAGGC        TTAATAAACAATATA 100 46
        yehD  870415 ..  870435 - -15.5  -2.81547   CCTTCAGATTAACTA            CCGGCAGTA CAA TACTGCCGG            TTATAATTTATTCCT  93 33
IUJ39_RS04405 NONE
IUJ39_RS04400 NONE
IUJ39_RS04395  866162 ..  866188 - -16.7  -5.28778   ATCATCGATAAAAAA         GCACACTCTCC GTTAA GGAGAGTGTGC         TTAGCATTGATTACT 100 36
        thiM NONE
        thiD NONE
IUJ39_RS04375  862648 ..  862660 -  -9.1  -4.87803   TATGGCTAAATAAAA                GCGGA TTT TCCGC                CAGTGAAATAGGCTG  90 431
        fbaB  860764 ..  860776 -  -6.2   -2.9916   CGGAAAAACTCAAAG                CCGC GCTGG GCGG                TGTCTCCTATCTTAT  53 497
IUJ39_RS04350  859171 ..  859201 -  -3.3  -4.21194   TCTGAGCACTTAAAA       GCATAGACTCATC TCCTG AATGAGTCTTTTC       TCTATTAATGTTAAA  60 153
IUJ39_RS04345  858624 ..  858642 -    -3  -3.44527   GAGGGAGTATGAGAA             CCAGCTGT TTA ACTGCCAG             CTCCTGCAGGAAACC  48 74
IUJ39_RS04305  845822 ..  845838 -  -2.2  -4.43213   CGGAAGAGAGCAAAA              TCGCCC TTTCC GGACAA              GCGGATGTGACGGCG  60 408
        alkA  843452 ..  843464 - -10.5  -2.72344   CGTTATCGTTAAGCA                GGCGG AGA CCGCC                GTTGCGACTCTGCAA  70 344
         udk  839788 ..  839813 -  -2.6  -3.14132   CCTTTCGCGCATCAA         GCCCTTAA ATCATGCACA TCAAGGGC          TAACCAGGTTATCAC  45 65
         dcd NONE
        asmA  837241 ..  837254 -  -8.1  -3.33261   CCGGAAGCCGGATAA               GACGC GTCG GCGTC                GCCATCCGGCACTCC  65 55
IUJ39_RS04265 NONE
         wzb NONE
         wzc NONE
        wcaA NONE
        wcaB NONE
        wcaC NONE
        wcaD NONE
        wcaE NONE
        wcaF  826029 ..  826046 -  -4.1  -3.54424   TTTCATTTCCTCAAA             TAGTCCC GTTA GGGAGTA              ACTTTCTGAACGCGC  52 16
         gmd NONE
IUJ39_RS04215 NONE
IUJ39_RS04210 NONE
        wcaI NONE
        cpsB  820737 ..  820752 -  -4.6  -5.24531   AGGCCGGATAAAAAA              CGCGCT ATCC AGCGCT               CATTGCCTGATGGCG  80 62
        cpsG NONE
        wcaJ  817698 ..  817710 -  -4.7  -2.57881   GAACCTGTTCACAAG                GCGTC ATT GGCGC                AGCCAGATTGAACAC  46 141
        wzxC  816165 ..  816177 -  -6.2  -3.72788   CCGGAGAAGACATAA                GCCG CCATC CGGC                AAAAAATGGGGGGAC  64 41
        wcaK NONE
        wcaL NONE
        wcaM NONE
IUJ39_RS04165  810864 ..  810884 -  -3.1  -3.05997   GGCTGATAAAGTATA            GACTTTCGC CAC GCGTTAGCC            ACTTTATATAAATCT  45 213
        galF  809841 ..  809891 -  -3.3  -4.68645   TATCCAAAACTAAAA CGGCAGTAAACACCCT-TTCAGCA ACCA TGCCATTTAGAATGTTCACCGCCG TTATTATTTTTATAA  66 68
        galE NONE
IUJ39_RS04145 NONE
IUJ39_RS04140 NONE
IUJ39_RS04135 NONE
IUJ39_RS04130 NONE
IUJ39_RS04125 NONE
IUJ39_RS04120 NONE
IUJ39_RS04115 NONE
        cpsG  797166 ..  797178 -  -3.3  -2.97747   CTTGGACATTACATA                CTCCT GTC AGGTG                TGGTCACCGCGCGAC  44 178
        gndA  795715 ..  795733 - -13.1  -6.06529   TATAGATAAAAAAAA             GCCCGGC ATTAA GCCGGGC             TTAAACAAGCTGGCA 100 45
         ugd  794323 ..  794343 - -13.3  -2.84098   TTGGTCAATGAATCA            CCGGGACTT ATC AAGCCCCGG            TTCTTTATTAGTCAC  86 33
        wzzB  793150 ..  793164 - -12.8  -5.81032   TAAGTGTAAAAAAAA               CCGGGC GTT GCCCGG               TTTTTTGGTGGAATT 100 83
IUJ39_RS04045  784562 ..  784577 -  -3.3    -2.706   GAAAAGGGAAAGGTA              TCATC CACACT GATGA               CCGGTTCGTTCTCCC  43 363
        yoeI NONE
        plaP  782260 ..  782278 -   -16  -5.48787   ATAACAGAGAAAAAA             CCGGAGGC ACT GCCTCCGG             TTTTGTTATTGTCGA 100 53
        phsA NONE
        phsB NONE
IUJ39_RS03990  773386 ..  773421 -   -12  -2.99251   CAAACATGGATAAAT    TGCAAGAAAATGTGAC ACAA GGCACATTTTCTTGCT     GACTTTATTTTATGG  81 47
        dacD NONE
        sbmC NONE
IUJ39_RS03975  770215 ..  770227 -  -4.7  -4.30987   AGCCGTCAGAAGAAA                CGCCG TTA CGTCG                CCGCCTGCGGGAACC  66 156
IUJ39_RS03970  769738 ..  769772 - -10.7  -3.53091   ACTGGCGGGGTCAAA     CTGCAGTGAGAGCCT GATAT ACGCTCCCACTGCCG     TAGCGCATTATTCGG  81 33
        pduF  751581 ..  751600 -  -9.3  -4.47259   ATGACAATACCAAAA            GTCTCCC ATTGCA GGGAGAC             GTTTTGATCAGTTCG  88 74
        pocR  750419 ..  750451 -  -2.8  -4.91511   ACCTCATCACAAAAA      TAAAAACTGGTGCA GTTTA TGCCCTAATTTTTA      TTATTTTGTTGCGCT  70 134
IUJ39_RS03850  748572 ..  748601 -  -5.6  -2.69799   CCAGGCGATACACCA       GGCAAGGATCGT CATGAT ACGCGCCTCGCC        GCCGCCAGCCAGTGC  50 7
        cbiB NONE
IUJ39_RS03840 NONE
        cbiD NONE
IUJ39_RS03830 NONE
IUJ39_RS03825 NONE
IUJ39_RS03820 NONE
        cbiG NONE
IUJ39_RS03810 NONE
IUJ39_RS03805 NONE
IUJ39_RS03800 NONE
IUJ39_RS03795 NONE
        cbiM NONE
IUJ39_RS03785 NONE
IUJ39_RS03780 NONE
IUJ39_RS03775 NONE
IUJ39_RS03770 NONE
        cobU NONE
        cobS  734558 ..  734573 -  -6.1  -3.38812   TCGCTCGTAATAACA              GGCTC ATAACA GAGCC               AGCAGAAAGATCAGT  59 13
        cobT NONE
        ldtA  732323 ..  732340 -  -3.4  -4.62069   GGGGCAGTTCAAAAA             GCCTGT GTTTAA ACAGAC              TTCAAATTGCTGACA  66 144
IUJ39_RS03745  728465 ..  728483 -   -16  -4.13014   CTGACAGGCTCAAAA             CCTCCGGC GAT GCCGGAGG             ATATTTATTTAAACA 100 386
IUJ39_RS03730 NONE
IUJ39_RS03725  725173 ..  725206 -  -3.7  -3.58162   TGACCACCAAATTAA     CCGGATGCGGAGGCA AAAC TGAGTACGCATCGGG      AAAGATTTTTACGCT  53 97
IUJ39_RS03720  723556 ..  723578 -  -7.7  -3.87815   TCGCAGGCGCAGAAA          TGC-GCGCCG GGTT CAGCGCTGCA           TAAGGCGATAAAATA  72 376
IUJ39_RS03675  712174 ..  712188 -  -7.2  -2.55361   TTATTGAAAAACGAG               GTAATG AAG CATTAC               TTTTTTGTACTAAAA  52 337
IUJ39_RS03625 NONE
IUJ39_RS03620 NONE
IUJ39_RS03615  693485 ..  693497 -  -4.9  -4.07877   CTACGTTACAAATAA                TAACA TCA TGTTA                TCTTTAAGATTACTG  63 46
        gogB  688372 ..  688383 -    -3  -4.11751   AGGAAGTTTTTAAAA                GATT TTTC AATC                 TCTTAAATATCAAGG  56 161
IUJ39_RS03585  686563 ..  686587 - -13.7  -2.87598   AGCCTGATAAAATAG          TGCCACTGATT TCT AACCAGTGGCA          AATTAATTAGTTAAA  87 55
        mtfA NONE
IUJ39_RS03550  683478 ..  683494 -  -8.7  -3.48657   TTAAACAGGGAAACA              TCCGGTC AGG GACCAGA              AAGCCTGCTTTTTCT  71 348
IUJ39_RS03525 NONE
IUJ39_RS03520  679452 ..  679466 -   -10  -5.24129   TCCGGGCATAAAAAA               GCTCCT GTA AGGAGC               TAATATGAATTATTT 100 35
        drpB  676722 ..  676749 -  -5.4  -4.04806   GTCGACATCAAACAA        CGCGACGCCCAG CGCG CCGGAAACCGCG         AAGACCCGCGCTAAC  65 523
IUJ39_RS03500 NONE
IUJ39_RS03495 NONE
IUJ39_RS03485  672467 ..  672479 -  -4.9  -2.78384   GCCTCCTGTATCAGA                TGAAA CGT TTTCA                CCTTAGACGAGGATA  49 70
IUJ39_RS03480  672237 ..  672256 -   -15  -4.34402   TTCTCCACAGCAAAA            CGCCCGGT GTTA ACCGGGCG             TTTTGTCATCGGGCT 100 31
        yedQ  670206 ..  670217 -  -5.8  -2.88861   CAGCAGTGGCACACA                CGTC CCCT GACG                 TTCGGACTGGGAGAC  52 193
        dsrB  668628 ..  668639 -  -4.4  -4.28115   ACGCATAATAAACAA                GTGA TTTA TCAC                 GTAGTGCGGCTGACA  64 118
        fliE  656571 ..  656581 -  -5.4   -4.1337   TTATATTATAAATAA                 TGCA AGC TGCA                 TGACGTTGCCTTTCC  65 109
IUJ39_RS03365  653785 ..  653816 - -10.8   -3.1505   AGGACGTGTGATTAA      CGCT-CCCGGCGGCA GAA CACTGCCGGGAAGCG      AAATTACGGCAGCGG  78 29
IUJ39_RS03340  649317 ..  649332 - -10.4  -5.26875   TCCGGAATTAAAAAA              GGCAGC TTTC GCTGCC               TTGATTGTGTACCAC 100 64
        fliB  648056 ..  648079 - -10.2  -4.42974   GCCAGATAGAATAAA          CGGGATGCGC AAGA GCCCACCCCG           AACAAAATTATGTCA  87 33
IUJ39_RS03330 NONE
        fliZ NONE
        tcyJ  645527 ..  645544 -  -5.5  -5.63517   GCCGGAAATAAAAAA             GGCGC CGATGAAC GCGCC              TCCGTTTGCGGACAG 100 95
        dcyD NONE
        tcyL NONE
        yecC  642907 ..  642919 -    -2  -3.36202   AGATAGATCGCAGAA                TACT TGAGC AGTA                TTACAGTTTTTATGC  45 142
        sdiA  642024 ..  642048 - -14.3  -5.55664   CCAGTAGTAAAAAAA          CGGCTGTAAGC GTC GCTTTCAGCCG          GTTTCGCTTCTGGCG 100 59
        uvrY NONE
        uvrC NONE
        pgsA  638235 ..  638247 -  -4.1   -3.5394   AAATTTGCGGCGAAA                CGATC ACT GATCA                AGCAAATCTCCACGT  52 16
IUJ39_RS03270 NONE
IUJ39_RS03265 NONE
IUJ39_RS03260  637727 ..  637740 -  -8.1  -5.82281   AAAGACACAAAAAAA               CCACC CGTA GGTGG                TTTCACGACACTGCT 100 70
IUJ39_RS03255  637165 ..  637179 -  -2.8  -2.90723   TTACCTTTAATTATA               TTGCTT AAA AAGCAT               CGTTTGCACAATCAT  42 49
IUJ39_RS03250  635470 ..  635505 -  -4.8  -2.98942   ACTTTTTCAGACACA    GTGTACAG-GGATACCA TCT TTATATCCACCGCACAC    AGTTGCCTTACTCAC  51 69
IUJ39_RS03245  634872 ..  634882 -  -6.8  -3.60098   ATTCCTCATCGCAAA                 GTGG GCA CCAC                 TGTCATATATGAGTA  64 163
IUJ39_RS03240  633851 ..  633887 -  -8.7   -2.9818   TTAATACCCAGAAAG    GGTTATCGGGCCCGG CCTCTAT CCAGCCCCGATAATC    ATCACGCGATGGTCG  65 52
IUJ39_RS03230  631929 ..  631951 -  -4.2  -3.55784   CAGAAAATTAATGAA          CTGGCTCAT GCCGCA ATG-GCCAG           CCAGGATTATCCGAC  51 236
IUJ39_RS03215  629925 ..  629938 -  -4.5  -3.87994   ATTCATCGCCAGAAA               CGGTA GCAA CACCG                TTTCTGGTCTGCATG  59 129
IUJ39_RS03210  629274 ..  629301 - -12.9  -3.09516   CTGGTGATGAGCTAA        GTTCTCTGGAA GATCTG TTCCAGAGAAC         TCTCGAGGATTACCA  83 347
IUJ39_RS03200  627497 ..  627533 - -20.3  -3.35679   GCTCGCCATTTAGAA   CGGCCATCGCCAGCCG AGGTAG CGGCTGGCGATGGC-G    TGGAGCTATACTGTT 100 420
        otsB NONE
        otsA  624984 ..  624996 -  -3.3  -4.15222   ATGCTTGGGAAGAAA                GCGGA TTA TCCGA                TTGAACAAACCTTCA  60 234
        flhD NONE
        flhC  623000 ..  623023 - -15.4  -5.86332   GTAAGGCAAAAAAAA          GCAGCGGTAA TGAC TTACCGCTGC           TGGAGTGTTTGTCCA 100 52
        motA NONE
        motB NONE
        cheA  619086 ..  619101 -  -3.2  -2.75064   CTTCTCACTCAATCA              GGCG GCTGTGAT CGCC               ATACGTTGTTCGCGG  43 7
        cheW  618525 ..  618553 - -19.7  -3.06261   GCTTAACGGTTAATA        TTGCCGGATGACG CGA CGCCATCCGGCAA        CGCCATTATGCGACG 100 31
IUJ39_RS03140  617609 ..  617622 -  -5.3  -2.78384   TTTTCTGTCAGTAGA               TAACG CTGA CGTTA                ATGGTGTCGGTATAG  49 4
IUJ39_RS03135 NONE
IUJ39_RS03130 NONE
IUJ39_RS03125 NONE
IUJ39_RS03120  612960 ..  612973 -  -2.3  -3.64465   GCGAAAAGGAAAAAC               CCTGC GCTA GAAGG                TGATATCGACTACAA  49 18
         tar  611189 ..  611199 -  -3.2  -3.51232   TGGTTCGCAAATTAA                 TCGA TAA CCGA                 CAGCACATCGCGCAC  50 46
        cheR NONE
IUJ39_RS03105 NONE
        cheY NONE
        cheZ  607998 ..  608033 - -12.7  -3.09273   TGGCGTTAATATAGA    TGGCCGGATACGATA AGAATG TATCGTATCCAGCCT     GGTTGATGGGTTCGG  83 76
        flhB NONE
        flhA NONE
        flhe  604229 ..  604266 -  -6.9  -4.85433   AGACAAAGCCAAAAA   TGCGGGCCAGGCAGCAA TTTT CTGCTGCCTGGCGAAAA    GATGAGGGATTAGCG  80 35
IUJ39_RS03075 NONE
IUJ39_RS03070  601091 ..  601116 -  -4.5  -4.11484   CTTAATTCTGGAAAA         CGGCGGGAGCG ACGG CGTTACCGCAG          CGCCCGTAATGCGAA  62 202
IUJ39_RS03055 NONE
        cutC  595756 ..  595780 -   -10  -5.90231   AGAAAGAGAAAAAAA          GGCCCCTG TTGAATTGG CAGGGGCC          TGGTACGAGCAAGCA 100 73
        aspS  589860 ..  589873 -  -3.7  -2.80816   CCTCCATTTATGAGA               CTCGC CCTT GCGGG                CCGCCGCGATATCAC  45 69
        nudB  589353 ..  589373 -  -3.2   -5.0133   TATTTCCTCAAAAAA           GCG-CGCCT TTTC AGGCGACGT            TAATTACAAACTCTT  72 15
IUJ39_RS03010  588586 ..  588604 -    -6  -3.05596   TATGTTCGGATTCAA             CCACCTCA TTC TAAGGTAG             CGGCAACCTCATCAG  56 12
        ruvC  588005 ..  588024 - -12.2  -5.67063   CGTATCATAAAAAAA            GGCTGGAT AGAT ATCCAGCC             TCATTTGTCATTAGC 100 36
        ruvA NONE
        ruvB  586286 ..  586313 - -12.8  -3.42354   GAGCTGAAGTTACAA        TGCCGGATAAGCG TAG CGC-CATCCGGCA        TTATCAAGTTTAAGG  93 35
        znuA NONE
        mepM  582343 ..  582365 - -13.4   -5.8901   ACACAAAATAAAAAA           GCCGGCACAC ATC GCGTACCGGC           TCTGTCAGCACATTT 100 42
        lpxM  581214 ..  581258 - -11.6   -4.2558   GACCGTTGAGTAAAA CCCGCC-CATGCCTGATAAGCG CTG CGCT-ATCAGGCATACAGAGGG TGTCGACATAAAGCC  93 61
         zwf  576855 ..  576880 -    -9  -5.80364   AGTGTAATAAAAAAA         GCCTCGCG-GG TGAAT CCACACGAGGC         TTAAAAGTGCAAAAA 100 105
         edd NONE
        kdgA  574109 ..  574120 -  -3.6  -3.44703   ATAAGAGCGAAAAAG                GCCG TCAG CAGC                 GTGATAGTAAAAGAA  50 140
        yebG  572518 ..  572528 -  -4.6  -4.41206   AAGCATGGTACAAAA                 CGCC GGG AGCG                 CAAGTGTGGGTCAGG  66 36
IUJ39_RS02930  572114 ..  572127 -  -3.7  -2.95527   AAGAAGCGCAAATTA               CACCG CTAG CGGGG                CCTATATTCCGCCGT  46 17
IUJ39_RS02925  571326 ..  571340 -  -5.6  -3.39908   GGGTGGCAAAAGACA               CGCATG ATG CAAGCG               AAACATGTTACTTAA  56 51
        ptrB  568902 ..  568919 -    -7  -3.53012   TTCCCTTTCGGCAAA             TACCGC GGTAAG GCGGTA              TCTGAAATAGCAAAA  61 208
        yobA NONE
        copD NONE
IUJ39_RS02890  565545 ..  565572 -  -8.5  -5.76633   TCAGAGATAAAAAAA        CCGTAACCCTT TTCGTG AAGGTTTACGG         TTTTTTATTAAAAAT 100 48
IUJ39_RS02885 NONE
       sspH2  561711 ..  561731 -  -7.6  -3.28712   CCCGTTTTTGCATAA           GACGTGGCT GCGG AGCC-CGTC            ATACCGGGCAGTCGT  63 332
       sopE2  558025 ..  558056 - -14.6  -4.94262   TATATTAAAAATAAA      GATGGCGACGTTTT ATTA AAAACGTCGCCATA       AAAACGAGCATATGG 100 98
IUJ39_RS02855  557606 ..  557650 - -12.9  -3.94438   CATCGGAATAAAATA TAACTGACTGCGCCAGGGG GCGTTAT CCCCTGACGCTGCGAGTTA CTCAATATCGCCTGT 100 61
        pphA  556489 ..  556504 -    -6  -4.19746   CTGACGCGAAAAGAA              CCCGTC GCCA GGCGGG               TTATTTATTCTTCCT  70 329
IUJ39_RS02820  550048 ..  550067 - -12.2   -3.1552   CCGCAGGCATGAACA            GGCGTCAT TATA ATGACGCC             ATCAGTAATTGCTAC  83 53
        proQ NONE
         prc  547214 ..  547235 - -13.1  -5.75342   GCTTGTTAAAAAAAA           CAGGCACAA TTTC TTGTGCCTG            TTTAGCGTTACTTAC 100 33
        htpX  546126 ..  546143 -  -8.4  -5.42259   TCAGGCGTAAAAAAA             GCGCGT TATTCG ACGCGC              TTTTTCATGTTGTCA 100 50
        kdgR  543728 ..  543750 -  -5.5  -5.26918   ATATGTTATAAAAAA           GCAGATGCA TTTTT CGCGTCTGC           TTTTTTTAACGTCAT  83 55
        mgrB  543013 ..  543039 -  -3.7  -3.92625   TACACGGGAAGGAAA         TCTCTGGTATA AAACG TTTACCAGGGA         ATAAATTTATTGATG  57 16
IUJ39_RS02780  542368 ..  542380 -  -4.9  -3.75762   TTAATCAAAATAATA                GAAAA GGG TTTTC                CGATACCGCTTCCTG  59 317
IUJ39_RS02775 NONE
        cspE  541588 ..  541607 - -11.4  -4.89009   ATATTGAATTAAAAA            GCCCCGCT TTTT AGCGAGGC             TTTATATCTGAGGCT 100 75
        ftsI  539650 ..  539677 -    -7  -3.59979   GCTGGGGACGCTAAA        GGGCGCAAGT GTAACGCG AATTGCGCCC         AGGGAAAATCCTTTA  64 38
        rlmA  538597 ..  538612 -  -5.4  -2.73364   CGGCTATCGCAACCA              GCC-TCG ATG CGATGGC              GGTTGGCGTCGGTCT  48 227
        yoaE  532593 ..  532607 -   -10  -2.74183   ATAAGCCAAAGCAAT               CCTCTG CAT CAGAGG               CTATTATTCCTCTTC  71 29
IUJ39_RS02705  526868 ..  526881 -  -5.2  -3.91897   TTTCTGAGCGATAAA               GCGG ATTTTG CCGC                CATGAATAAGGCGTG  63 152
IUJ39_RS02695 NONE
        tsaB NONE
IUJ39_RS02685  523165 ..  523189 - -14.4  -2.56596   GTCTCTATGAATGCA          GAAACAGCGG ACCAG CCGCTGTTTC          TTTTACTGATAAAAC  87 47
        fadD  521281 ..  521297 - -11.5  -5.75342   TCGCGCCAAAAAAAA              CGCCGGC TTA ACCGGCG              TCTCTCGTTAGCTGA 100 49
         rnd  520033 ..  520048 -    -9  -4.72272   TTCCTGGATTAAAAA              GGCAGA AGAA TCTGCC               TTTTTTATTTTTTTG  90 98
IUJ39_RS02655  517728 ..  517761 -  -4.5  -3.79519   AAGGTCATCATGAAA     TTCAGGCGCAGCGTCA TGT CGACGCGAAGCC-GAA     TAGCGTTTAACGGTC  58 32
IUJ39_RS02650  517011 ..  517037 -  -5.9  -3.12351   GGCCTGCAGATGCAA        GTTTTACCGCCT CTGA AGGCGGT-AAGC         AGATTTTACAGAACG  52 31
IUJ39_RS02645  516344 ..  516365 -  -6.5  -3.05769   CTTTGAAAGTATAGA           GTCGC-CGCC ATA GGCGCGCGAG           CGCAGCGACAAGGAG  56 164
IUJ39_RS02640 NONE
IUJ39_RS02635  515578 ..  515603 - -14.7  -2.78712   TCTGTAACCCAATCA         CCACCGGGCGA CGTC CCGCCCGGTAG          CCAGGGGGTCAATGG  89 54
        fadR  511445 ..  511455 -  -6.8  -3.71627   TGATGAAGATAAATA                 CTGG TTT CCAG                 ATATTGCCGGTTCCG  66 521
IUJ39_RS02605 NONE
        dadX  507467 ..  507478 -  -5.8  -3.00525   CTGGGTGAAATCATA                CAGC AACT GCTG                 GGCGCCGCGCCGGTC  53 213
        emtA  503868 ..  503925 - -10.7  -3.14257   GGAAAAATGAAACGA TCACCACTCC-CCGCCTGAGCTTTCGTT TCCTT AACGTTAGCCC-GGCGGTGGAGCGG-GA GTTACAGCGGATTAT  74 106
IUJ39_RS02575  502328 ..  502351 - -14.6  -2.60496   GCCGCCGCGAAAGAG          CGC-GCCGCGA AAG TCGCGGCAGCG          ACCCAGGCGCATCTG  90 506
        agaR NONE
IUJ39_RS02505 NONE
IUJ39_RS02500 NONE
        agaW NONE
IUJ39_RS02490  483851 ..  483883 -  -5.6  -2.64735   ATGTTACTTACACCA     TATCCGCATGCTGCG ATTG CCCA-CAGGCGGATA      CGGCGACACAAATCA  50 46
        agaF NONE
IUJ39_RS02480 NONE
IUJ39_RS02475  482106 ..  482118 -  -7.7  -2.95298   GTTATTCACTACAGA                CCGTA AAA TACGG                GCAGTTTTTGTCTCT  61 85
IUJ39_RS02470 NONE
IUJ39_RS02465  478930 ..  478968 -  -3.1  -5.27938   ATGGGTAAATAAAAA   TCATCAGAGTTTAGAAC TTGAT GTCCTTCCCTCTGACGA   TTAGTAGTTCATTTT  77 34
IUJ39_RS02460  477110 ..  477127 -  -9.9  -4.46581   GAAAACCCTATAAAA             TCCATGC TATT GCATGGA              TTTTATGTATCATAG  89 205
        ychH  474450 ..  474464 -  -4.2  -3.53091   ATTGTCGTTCTGAAA               TGGGAC GCA GTGCCA               GTGCTGGATGCAGGC  51 262
        hemA  468552 ..  468564 -  -2.7  -3.59262   CTTCATAGGCGTAAA                TTCAC CCT GTAAA                AAAGTGTGGTGTGTG  50 44
        prfA NONE
        prmC NONE
       sirB2 NONE
       sirB1 NONE
        kdsA  464492 ..  464513 - -13.1  -5.36441   GCCTGAGACAAAAAA           GCCGGATAA CGTC TTATCCGGC            CTATCCAAGCAAAAA 100 48
        chaB  462436 ..  462452 -  -6.5  -3.11687   CGAATCATTATTTAA              TAGCCTG CGT CTGGCTA              TTGCGCTGCGTGAGC  53 458
IUJ39_RS02360  456564 ..  456582 -  -8.8   -6.0427   AGCAGATAAAAAAAA             GCGCGG TCTAACG CCGCGC             AAAGGATAATCAAAT 100 42
IUJ39_RS02355 NONE
        narH NONE
        narJ NONE
        narI  449516 ..  449531 -    -9  -5.64274   TCAGGCATAAAAAAA              CCCTAC CGAA GTAGGG               TTTAGTATCCTGTTA 100 48
        rssA  446360 ..  446377 -    -7  -3.13403   TGGCTTTGATCAATA             GTGGCA TGGTAT TGCCAC              TCGCGCCTGTCAGAA  59 68
        rssB  445289 ..  445299 -  -3.2  -3.56594   GGAAAGGCCGGTAAA                 GCAA TTT TCGC                 CCGCTCTCCCGTTTG  50 42
        galU  444160 ..  444178 - -10.2  -5.90231   ATAAACATAAAAAAA             GCGCCGGA TAT CCCAGCGC             TTCTGTTAAAAATTT 100 52
         tdk  442326 ..  442343 - -12.7  -4.38712   CTTACCGTGACAAAA             CGGCCTC AATT GAGGCCG              TTTTTTGTTGTACCT 100 189
        ychE  438452 ..  438473 - -12.3  -3.34043   GTGAGGATGTCACAA           GGCGGC-TCC TTA GGACGCCGCC           TGTAAATCAATGGGT  90 47
        oppA  436066 ..  436091 - -14.9   -2.7404   GATAAGAAAAGACAC         CATGGGATAAC CGTT GTTATCCCATG          TATTGCCATTAATGT  89 34
        oppB NONE
        oppC NONE
IUJ39_RS02260 NONE
        oppF  432081 ..  432101 - -12.6   -3.9392   CCTCACCTGAAAGAA            GGGCTGAC AAATG GTCAGCCC            TTGCGATTATAACGG 100 32
IUJ39_RS02250  430982 ..  430993 -  -7.2  -3.05343   TTTACAGTTCGAAGA                GCGC GGCG GCGC                 GGAGTTGTTTGATCC  56 256
IUJ39_RS02235  429006 ..  429040 -  -6.3  -3.18031   TTTTTAAAAAGGATA    GTCTG-TTGGGCACCG TATA CGGTGCCCTATCTGGC     TTACACACCGTGAAT  57 26
        tonB  427429 ..  427462 -  -4.6  -3.24708   TACTGGCCAAAGAGA    TCGCACACGGTCGTGT GGTA AC-CGTCCGCGTG-GA     AGGAATGACATTTCT  49 318
        ompW  424071 ..  424083 -  -9.1  -2.56271   CGTGTACTACAACAT                GTCGC AAG GCGAC                GACCCGCGAGGTAGC  62 323
        yciV NONE
IUJ39_RS02140  412817 ..  412828 -  -7.2  -3.72576   CTGTTCGCCAGGAAA                CCGG TGGG CCGG                 GCAATGTTGTTCTCA  68 459
IUJ39_RS02125  411085 ..  411098 -  -2.5  -3.21747   TTAGCCTATGATTAA               TTTTT AAGC AAAAA                AAAACGTAAGCCCCT  45 49
        rluB  409949 ..  409981 - -10.6  -2.57795   TTGATTATTAATGTA     GGCCGGATAA-GGCG TTTG CGCCGTCATCCGGCA      TAAACAGCCTTATCT  74 83
        sohB  407149 ..  407159 -  -6.8  -3.18582   CACCTGATTGATTAA                 TCCG TGC CGGA                 TGGCGGCCTACATTG  59 178
        topA  403850 ..  403867 - -14.1  -4.83169   AGTGCGCTATAAAAA             GGGCCGC TTAT GCGGCCC              GGTTTACTATTGCGG 100 55
        cysB  402555 ..  402566 -    -3  -4.20516   TTTCCAGCGAATAAA                TCAA TCTT TTGA                 CTCAAGATAACTATT  58 171
IUJ39_RS02085  402130 ..  402148 -  -5.3  -3.33815   ACTGTGTTTAATCAA             TACTGAG AGGCG CTCAGCA             CACGGCTGCTGCGGT  54 166
IUJ39_RS02080  401979 ..  402004 -  -9.1  -4.88711   ACAAGACATGAAAAA         GCCCGATAA ATAACGCA TTATCGGGC          TTCTGATTAGACGGC  93 32
        acnA  399079 ..  399103 - -14.3  -3.07283   TAAAGCCGCCAAAAT          GGGCCACCTGC TAA GCAAGTAGCCC          CCGCGATTAAAGCGG  89 79
        pgpB  397470 ..  397495 -  -9.1  -2.90813   CAGCCTTCTAAATTA         CCATTTTCACGC CTC GCGCGA-AATGG         AAAAGCGCCCGCCAT  67 80
        lapA NONE
        lapB  395810 ..  395829 -  -3.6  -3.54676   ACGCAGTGAAATTAA            CAGGTT CGATTGAC AACCTG             CCAGGCCTTAGTCGA  50 112
        pyrF NONE
        yciH  394198 ..  394208 -  -5.4  -3.50555   GCGAAATAACAGTAA                 GTGA CTA TCAC                 ACGCGTGATATATCC  57 478
IUJ39_RS02005  386233 ..  386247 -  -6.4  -3.30159   TTAACTCCCTGATAA               TGCGCT TTT AACGCA               AATCAATCAATAAAA  59 441
IUJ39_RS02000  385488 ..  385510 -  -9.2   -3.3568   TAACCCAAACCAATA           CCCTCAGA TCGATTC TCTGAGGG           TGTACACGCTGCTGT  71 6
IUJ39_RS01955  379140 ..  379165 - -11.9  -2.91027   TTACCAAAGTAATTA         TTCAGGCCATC TCGC GATGGCCTGAG          CTGTCCAAAAAATGC  80 71
        pspA  372765 ..  372775 -  -4.6  -3.60098   AGCGGCGACGCGAAA                 CGGC GCC GCCA                 TTGTCTCGTTATTGG  55 34
        pspB NONE
        pspC NONE
        pspD  371795 ..  371816 -  -8.1  -5.03747   AAAGCCGCTAAAAAA           GACTTTTGG CAGC CCAAAAATC            ATATTTGTGAGCTGC  87 96
IUJ39_RS01905 NONE
IUJ39_RS01900  368682 ..  368694 -  -2.7  -3.85748   CGACCGGAAAAAAAC                CTATT CAT AACAG                CTTTCCACGTCCGTG  52 41
IUJ39_RS01895 NONE
IUJ39_RS01890  366972 ..  366984 -  -2.6  -3.14848   CTCCTTGATTAAAAT                GGCC GCCTT AGCC                CTTCACGCCGCCAGC  45 20
IUJ39_RS01885 NONE
IUJ39_RS01880 NONE
IUJ39_RS01875 NONE
IUJ39_RS01870 NONE
        pgmB NONE
IUJ39_RS01860  359961 ..  359985 -  -5.8  -2.55392   AACGCACCTAACCTA         TACCGGAGAAA TGCC TTCCTCCGG-A          TTCTTTAGTTATTGA  50 34
IUJ39_RS01855  358976 ..  359002 -   -13  -3.33696   GCTGGCCTGAATTAA         CGGCTGCCCG TCAATAT CGGGCAGCCA         GCGTTTTGTCAGAAA  95 34
IUJ39_RS01845 NONE
IUJ39_RS01840  355249 ..  355261 -  -2.6  -3.54662   TTAAATAGATGATAA                GCCA CTATT CGGC                TGTCAGGAAGGATTC  48 118
        tyrR  353635 ..  353658 -   -11  -3.28712   GCTTGTTTGTCACAA          GAAGGCCTCC ATTC GGAGGCTTTC           TTTTCTCTACTCTTC  80 32
        ycjG  351698 ..  351742 -  -2.8  -3.69354   GCTCAGAACCGGAAA CCCAGGCGCTTTGCCAGTTAA TACA TCGACTT-CAACCCGCCTGGG TAGTCTCTTTTCACG  51 272
IUJ39_RS01815 NONE
IUJ39_RS01810 NONE
IUJ39_RS01805  348496 ..  348512 -  -3.7  -4.14158   GACATAAAGAAAACA              GCTTTAA GTA TGAAAGC              GAGAGTCCGCAGCAA  59 247
IUJ39_RS01800  346445 ..  346472 -  -9.8  -3.35813   TCTGATTTTAAGGAA        GATCTGGCGCTG TAAA CCGTGCCAGATC         TGAGTTTAGCCGTAG  74 72
IUJ39_RS01790  345579 ..  345607 -  -7.4  -4.52589   TGCGGTCATACAAAA        CCGGAAACAAGC TTTAC ACCTGTTACCGG        TTTTTTATATGCATA  80 113
        zirU NONE
        zirT NONE
IUJ39_RS01770  340532 ..  340550 -  -9.6  -3.56445   AATATAACATTACAA             CCTCCCTA TAA TAGGGAGA             TACTTTTTAAAAAAA  75 1
IUJ39_RS01750  337702 ..  337723 -  -3.7  -4.09511   AAGATGCCGGCAAAA           TTAGCATCA TCGT TGACGCTAT            CAGAAACATGCTGCA  60 368
IUJ39_RS01740  336286 ..  336321 -  -5.4  -2.64735   ATTGGACGTACAGGA    CT-CTCGGCCGCGTTTC TGG GTAACACGGCAGAACAG    GTTATTGACCATTTG  47 156
        smrA  332646 ..  332662 -  -3.7  -3.93256   TACACGCTTAAATAA              GCGAA TTGGTGT TTCGC              TGGAGACGCCGTATT  57 183
IUJ39_RS01715  331200 ..  331218 -  -7.4  -4.58283   GAAGGTGCGGAAAAA             GCGCCT TCGCAAC AGGCGC             TTACCAAAATGTATT  80 39
        zntB  329898 ..  329917 -  -7.1  -5.83822   TACAGGCAAAAAAAA            GCCGACT AATCTA AGCCGGC             GTCGTACGAATCAAT 100 215
IUJ39_RS01705 NONE
        dbpA  327921 ..  327934 -  -8.1  -3.18274   CGGATCGCAACCCAA               CCTGC AACG GCAGG                TGATTGCCGACATGC  61 338
IUJ39_RS01685  322858 ..  322871 -  -5.9  -2.90615   AGCCCCCCTAAAGGA               GCCCG CAAG CAGGC                GTAGCGCGTTTTTGC  51 271
IUJ39_RS01680  322040 ..  322062 -    -9  -3.38832   TATCAAGAAATTCAA           CCTTCCCGCG GAC CGCGTGCAGG           CGCACGTTGCAGAAG  69 251
IUJ39_RS01660  317154 ..  317167 -  -3.7   -3.5013   CCGCAAACCAATTAA               CGCTG GCGA CGGCG                AAAACAACGCTGATG  51 111
IUJ39_RS01645 NONE
IUJ39_RS01640 NONE
IUJ39_RS01635  312147 ..  312163 -  -2.9  -5.02476   ATATTCTCTAAAAAA              TGACTCA ACG CGAGACA              CTCCATCAGAGATGA  70 136
IUJ39_RS01630  311267 ..  311287 -  -5.4  -2.56426   GAATATCCACAACAG            CGGCATTC GGTCA GAATGACG            GGAGGGAACCAGCGT  50 271
IUJ39_RS01620  310323 ..  310336 -  -2.3  -4.70659   CGCTATACCGAAAAA               GGACC AGAA GGTCT                GGTAACCGGCAAACG  66 242
        hrpA  305829 ..  305840 -  -3.6  -3.53811   CGGATCTCGTCGAAA                GGCA CCGT CGCC                 TGGCTTTTTAGGCCG  50 33
IUJ39_RS01605 NONE
        cybB  303887 ..  303897 -  -6.8  -3.36505   AGAGGTTACTCACAA                 TGCC TTT GGCA                 AGAAATTGATGGCTG  59 453
IUJ39_RS01575  299717 ..  299743 - -12.2  -3.57792   GCATTCACCCGTAAA         CGGCGGTTACGC CAG GCGTACCAGCCG         CTACAGGCAACACGG  89 507
IUJ39_RS01555 NONE
IUJ39_RS01550  296370 ..  296394 - -15.7   -4.5538   AGAAAATTCAGAAAA          GCGCCAGCGGA ACA TCCGCTGGCGG          ATACATCATTTATCG 100 31
IUJ39_RS01545  294242 ..  294252 -  -6.8  -4.07568   GTCGTCTCGCCAAAA                 GGCA CAG TGCC                 GCGCCAGAATGCGGA  70 378
IUJ39_RS01535 NONE
IUJ39_RS01530  290339 ..  290349 -  -2.6  -2.60776   AACTGCGCAAAAACG                 TAAA TAT TTTA                 TGTCGATAAGAACCG  40 90
IUJ39_RS01525  288125 ..  288140 - -10.4  -3.80573   GCGAGGAGTACCAAA              GGAGGC AATT GCCTCC               TTTGGCTCTAACGAG  80 424
        rimL  286053 ..  286064 -  -4.4  -4.25681   ATCGAAGGCAACAAA                GACA ATAA TGTC                 TGGATCTGTGACTGC  64 397
        tehA NONE
        tehB  283646 ..  283663 -  -7.1  -2.90316   CAAAGAAAATAATAG             CAAAATG AAAC CATTTTG              GATGAACTAAAAATG  59 118
IUJ39_RS01485  282624 ..  282640 -  -2.2  -3.02166   CCCCGAACCAAAGCA              TCGCTG GTTAG CAGCTA              CCGCCACAGGAGTTT  42 317
IUJ39_RS01470  279464 ..  279481 -  -5.7  -3.13403   GCGGTTGGACGAATA             TTACAAT GAGC ATTGTAA              TTAACAGGCCTATAC  54 505
IUJ39_RS01455  277051 ..  277077 -  -4.5  -3.56099   GACAACGTGTTGAAA        CGACGATTTTCC GTAA AGAAAA-CGCCG         AGGAGTATCCAATTA  54 248
        ycdR  274301 ..  274328 -  -9.8  -2.71831   TTCCTAAAAATAGAC        GGCGCGCCAGAT GCTC ACCCGACACGCC         CGGGAAATTTAGCCA  69 81
        patD NONE
IUJ39_RS01430  272220 ..  272248 -  -5.2  -4.08216   TGATCTGGTGGAAAA        CCATGCCCGGTA ACGAA TATCGGGCTTGA        CGTCAGAAAAGCGAA  63 28
IUJ39_RS01410  264865 ..  264875 -  -3.2  -3.28119   ACGTATGCAGATGAA                 CCAG TCC CTGA                 CGCTTATCTTTTTGA  47 464
IUJ39_RS01395  263058 ..  263076 -   -11  -2.70532   ATGGCGACAAATTTA             TGGCGACA AAA TGCCGCCA             TTTTTTCTTTACGCA  74 34
        mcbR  262042 ..  262058 - -11.5  -3.04515   AAACATCCGGCAATA              GCGGGGA GAG CCCCCGC              TATAAGGTAAGCCAT  79 43
IUJ39_RS01380  258547 ..  258582 - -14.8  -3.53091   ATCGGTGCGTTTAAA    GAGATGACTGGAGGGG GCTT CCCCTCCAGTCATATT     TACAGAGCAATGCGG 100 25
        smvA  255592 ..  255606 -  -4.9  -3.18274   CTTACTGGAACTGAA               CGACG TTGAT CGCCG               TCGGCTGATTCTGGC  49 180
        fdnG NONE
        fdxH NONE
        fdnI  247798 ..  247823 - -17.7    -4.371   GGCAGCAGATGAAAA         CAAGGCGCTAC CATT GTAGCGCCTTG          TTTATAAGCGACTGA 100 46
IUJ39_RS01310  243355 ..  243367 -  -4.1  -3.72374   TCTGAGGAATAAAGA                TCACG ACG CGTAA                TATGGCTATTATTGA  55 255
        hdeB  242878 ..  242911 - -16.2  -4.16016   TGACGTTGTAACAAA     TAGCAAAACCCGAC ATATTG GCCGGGTTTTGCTA      TCAGTTTACTCTTAT 100 37
IUJ39_RS01300  241914 ..  241926 -  -4.1   -3.9461   GCCTCCGAAGAACAA                GCATA GAC CATGC                GGCTAATCTTTACGT  57 96
        treZ NONE
        treY NONE
        glgX  235379 ..  235405 - -15.9  -3.56092   CCACCATCGCCCAAA         CCCAACCGGCC ATAAA GACCGGTTGGG         TTTGGATCGCAGTTT 100 46
IUJ39_RS01210  221744 ..  221768 -  -3.5  -5.06414   TCCGCCCAATAAAAA          TTGGTATCACC AGG GATGTTACCGA          CTTTATTGCACAGAA  74 479
IUJ39_RS01185 NONE
IUJ39_RS01180 NONE
        cybH NONE
        hybD NONE
        hypC NONE
IUJ39_RS01160 NONE
IUJ39_RS01155 NONE
IUJ39_RS01150 NONE
        hypA  211803 ..  211816 -  -6.7  -4.20042   ATTAATATGCTAAAA               GATGG CAAT CCATC                GAATTCTAATACAGA  72 207
IUJ39_RS01110 NONE
IUJ39_RS01105  204971 ..  204991 -  -3.9  -3.04398   GGCTGGTGGGAAAAG            GGGGGATTG AAG CAATTTCCC            GCTTAATGGGATTCC  46 154
        marR NONE
        marA  203309 ..  203321 -  -6.3  -2.90763   TGCATAGCGCATATA                CAACT AGC AGTTG                CCATGATTCAGCGGC  55 16
IUJ39_RS01085  202909 ..  202933 -  -9.3  -4.21908   CAGCATGATTCAAAA          GCCCGATGA ACTGGCG CCATCGGGC          GTGTTGCGGTTGGCT  82 42
        mgtS  201995 ..  202029 - -16.5  -4.55287   GCCATCCAGACAAAA    GCGGCCCCTTGC-GCA ACGA TGCAGCAAGGGGCCGG     CTCTGCGAGGGATTA 100 51
IUJ39_RS01065  200300 ..  200318 - -10.2  -3.49102   ATATTGCGCATACAA             TGCGGGCC ATA GGCTCGCA             TTTTTTATTCTGACC  77 76
        ydfG NONE
IUJ39_RS01045  195950 ..  195962 -  -6.2  -3.41126   TGAGAAAGCGGAGAA                GGGG GCTCA CCCC                GAAGTTAAAGGGGGT  59 40
        ydfZ  195538 ..  195560 - -17.8  -3.10513   ATAGCGCAACAGAGA           CCCGGTAGCA TTA TGCTACCGGG           AAGGCCGGGGCGGAT 100 58
IUJ39_RS01010 NONE
        speG  188490 ..  188502 -  -6.2  -2.80575   AAAAGCTGGATTATA                CGGC AGTCA GCCG                GGTAGATGATCGGCA  51 220
IUJ39_RS00995  187500 ..  187526 -  -7.3  -2.62792   ATCCATGTCAAAGAG        CGTTACCCTCCG GACC CGGAGGGTAG-G         AGGCGTTTATTGCGG  57 32
IUJ39_RS00990  184923 ..  184933 -  -4.6  -2.93708   GGCGCGTAAAAACAT                 CCCG GAG CAGG                 CGGCTTAGATTTTTT  48 30
IUJ39_RS00985 NONE
        dmsB NONE
IUJ39_RS00975  180892 ..  180909 - -12.7  -2.78349   AAACAATCCCGAAAG             GTGCGGG TCGC CCCGCAC              GCACAAATTAACCTG  82 33
        dmsD  180231 ..  180248 -  -4.1  -4.11484   CGCAATGGGTGAAAA             GGCAG TTAAAATC CTGCC              TTTTGTGGGGATTAA  59 37
        osmY NONE
        osmX NONE
        osmW NONE
        osmV  176476 ..  176504 - -10.2  -3.50808   CGCAGGATAATAATA        TTGCCGGAGGGC AAGAG GCCATCCGGCGA        CGCGTTAGCTGCTTT  77 30
        clcB  174596 ..  174619 -  -6.7  -4.16842   GGGATGCGCAACAAA          GACGCTGTG GTATTG CAAAGCGTC           TCTTCACTGGAATTG  72 491
IUJ39_RS00925  170646 ..  170678 - -11.3  -3.11208   GTGGAGTGAAAAGCA      GCCCGGCGATAAC GTACATT GCTATCGCCGGGT      TATCTTCTTTCAGGC  79 35
         asr  170012 ..  170030 -  -8.1  -4.57569   TTAGCGCCGTAAAAA            CGGGCGCG GGGG CGCGCC-G             CAGCATGTTACGACT  82 40
IUJ39_RS00910  168911 ..  168936 - -13.3  -2.62263   ACTTGCCTGATATGA         TCGCTGCCTGC CAGT GCAGGCAGAGA          TTCCCGCTATTCACC  84 44
        ydgH  163146 ..  163166 -  -2.5  -5.03314   TTTATCGCTAAAAAA            GCGAAAAGT GAG ATTTATCGC            GATATTTGCCAGAAT  73 162
IUJ39_RS00870  161240 ..  161255 -  -6.8  -3.73224   GGACTCGTGATTAAA              GCTGCCC TCG GGGC-GC              TGGTCGTCGTACTGA  66 391
        rstA  160300 ..  160322 -  -6.9  -3.01712   GTCTTTTTTTGAACA           GTGGCGGCG GCGTG CATCGCCAC           GATAACTCGAAAAAA  58 64
       ompS2  158693 ..  158711 -   -16  -6.04324   CGAAAAAACAAAAAA             GCCCGCCA AAA TGGCGGGC             TGACGATCGTGATGG 100 46
        rstB  156907 ..  156922 -  -2.6  -3.25102   ACTTTAGTTACAACA              TACTAT CTGT ATAGCA               CAGTTCCCGCAGCTC  45 60
         tus  155845 ..  155869 -  -8.5  -4.07535   AAGGCGCATAAAGAA          GGGCTGACGCT CAA AGCCTCAGCCG          TGGCATTAGGATACC  77 108
        manA  151274 ..  151295 -   -13  -4.38116   TCCATAAAAATGAAA           CCAGGCGG ATTAAA CCGCCTGG            AGGAGTTTTACGTCT 100 83
IUJ39_RS00820  149230 ..  149272 -  -4.7  -3.59979   GGCTGGGAGGGCAAA GCGC-ATCGTTGACCCGCGCG GAG CGCGTGGG-CGGCTATTGCGC GACGTTGTTAAAATA  55 495
        malX NONE
IUJ39_RS00805  145509 ..  145519 -    -4  -2.87944   CACCATTATACTACA                 GATT GGT AATC                 CTCTGGACATTTTGG  46 215
         add  144130 ..  144145 -  -3.2  -4.57569   GGAGCGGCTCAAAAA              CGGTGA GCGC TTACCG               CAGGAAGACTGGGGA  65 343
         blr  142807 ..  142823 -  -2.2  -4.52589   GGGGCGCAGATAAAA              CGGGAA TATTC TTACCG              GTAAGCGTCTGGCGC  61 209
        ydgT NONE
IUJ39_RS00780 NONE
        rsxA NONE
        rsxB NONE
        rsxC NONE
        rsxD NONE
        rsxG NONE
IUJ39_RS00750 NONE
         nth  135526 ..  135539 -  -5.3  -3.80114   CATGAAGTTATCAAA               GTGAT CTTG ATCAC                GTATAGATAGAAATT  59 189
        dtpA  133554 ..  133576 - -13.5  -6.07627   ATGCGCAAAAAAAAA           GCCGCTAAC GCACA GTTAGCGGC           CTGAATGTTGTTTCT 100 48
        gstA  132849 ..  132880 - -11.6  -3.63744   TTGCTGCTGAAAAGA      TGCCGGATGGCG GTAAAGCG CGCTATCCGGCA       AAATGATATTACTTC  87 34
        slyB  127195 ..  127219 -  -3.6  -3.54543   ATTCAGTTGGCTAAA         GCGATAGGC ATTGAGCA GCC-ATCGC          TGGTACGCACGTTGG  51 321
IUJ39_RS00695 NONE
IUJ39_RS00690 NONE
IUJ39_RS00685  123671 ..  123681 -  -8.2  -3.62096   TCCGATCAGCCGAAA                 CCGC TCG GCGG                 CGGCGGGACGCGTTA  69 38
IUJ39_RS00665  121223 ..  121242 -  -6.4  -5.67283   AACGGAAATAAAAAA            CGCCTG TTACTGCT CAGGCG             TTGTAAGGATGGTCT 100 12
IUJ39_RS00660 NONE
        gloA  119566 ..  119587 - -10.1  -4.26327   GATGCAGTAAAACAA           CGGGCACAA TGAC CTGCGCCCG            GCGGGAGATCAGTTA  85 34
         rnt  118787 ..  118804 - -11.3  -3.71649   TGCGCAAAGGGGAAA             GCGACCT ACTA AGGTCGC              TTTTTTACCAGTATA  91 69
IUJ39_RS00640  117223 ..  117249 -   -11  -3.11798   GCGCAAAAGAAGAAG         TTATCCTTTCGT TAA ACGACAGGATAA         AATATTATCGAATTG  76 30
        sodB  116515 ..  116536 - -14.5  -4.16943   TTGCACATTGTAAAA           CGCAGAAGG CGAA CCTTCTGCG            GACTCAGACTTATGC 100 35
        purR  114885 ..  114899 -  -5.6  -3.27498   GACAGCGCAGATTAA               CGGCGA TAG TCGCGG               AACGGGCCGTCAGCG  54 7
IUJ39_RS00615  112415 ..  112434 -   -10  -2.91276   GGCTTTGTGAGAAAT            CCCACGGA CAAT TCCGTGAG             CCAGTTATCCGACGT  72 225
         cfa  111167 ..  111189 - -13.4   -4.3586   TGACGGAGAGTAAAA           GCCCCCGCAT GTA ATGCGGGGGT           GGTGATTAGCGAGGA 100 31
        mdtK  108895 ..  108914 -   -10  -4.39828   AATATGTCGAGAAAA            TAGCCGCC ATGC GGCAGCTA             TTTTCGTATTATCGC  87 34
IUJ39_RS00595 NONE
IUJ39_RS00590  108161 ..  108171 -  -6.8  -3.17392   TAGTGCGTAATCCAA                 CGCA TAT TGCG                 GTTTGTCTTGGCTAT  57 462
IUJ39_RS00435   83926 ..   83937 -    -3  -3.83375   CGAAAATTAAGATAA                CATT AAGT AATG                 GTGTAGTTGTTAAAA  52 16
IUJ39_RS00430   83243 ..   83258 -    -4  -3.09919   ACAAAATGCTCAATA              CCATAGG ATG CCT-TGG              TTAATACTCTATTAA  47 26
IUJ39_RS00425   82211 ..   82225 -  -4.9  -2.75064   CCCCTTATTGAAGCA               CGACG ACTGA CGCCG               AATGGCGCAAAACGT  49 162
IUJ39_RS00420   80919 ..   80930 -  -3.6  -3.61715   CAGGGGTGTTAAGAA                CCGC GCTG GCGA                 ATCAACGTATCCAAC  53 326
        ttrB NONE
        ttrC NONE
        ttrA   73121 ..   73136 -  -2.5  -4.58395   CTGATCGCGTAAAAA              CGC-GC TTATT GCTGCG              AAGCAGGGCGCGATA  63 215
IUJ39_RS00375 NONE
        pykF   70908 ..   70922 -  -8.5  -5.99154   GATTAAATAAAAAAA               GCGCC GCGAG GGCGC               TCTTCTAAACAAATT 100 58
IUJ39_RS00365   70370 ..   70388 - -14.6  -5.76633   TGACAGACAAAAAAA             TGGCGCAC AGA GTGCGCCA             TTTTTATTACGCAGG 100 46
        ydiK   57476 ..   57502 -   -13  -3.56862   ATAAACTTTGCTAAA         GCATTGGGCGGC ATC GCCGCCCAATAT         GGTTATGACTGCTTG 100 28
        rprA NONE
        aroD   55894 ..   55905 -  -5.8  -3.61398   GCGGTCGTCGAAGAA                CTGG CGCG CCAG                 GGCCTAAAACGCGGC  60 515
        ppsR NONE
        aroH   51514 ..   51537 - -14.6  -4.21631   AACGCATCGAAGAAA          CGCCCATCCC CGGC AGGATGGGCG           GGGTATTAAAAGCGG 100 31
        hemP   51158 ..   51193 -  -6.9  -2.52676   CAGTTGTTCAAGTTA   GC-CTGACGCCAGCAGA ATCG TCCGCTGGCGG-AGCGC    TATTTGGTTAACAGT  54 25
IUJ39_RS00190   35887 ..   35900 -  -9.5  -4.60487   TATCACCTGTAAAAA               GCCCC TACC GGGGC                TTAAATTGTTAAATC  91 34
IUJ39_RS00185   35543 ..   35553 -  -2.6  -4.08216   TGATTTGCCTCAAAA                 TATT TAT AATA                 TGTTCTTATCCTAAT  56 73
IUJ39_RS00180   34316 ..   34332 -  -7.3  -3.49077   CTGAGAAAAAGTTAA              GCCAGAT GTA ATCTGAC              AGATACCTGTATAAA  65 79
IUJ39_RS00165   30864 ..   30876 -  -3.3  -3.70417   ACGATACCACTGAAA                CGCAG CCG CTGGG                TTATGCCTCCGGCAG  51 312
        pfkB   29077 ..   29091 -  -8.5  -3.63744   TCTGTTTCTAAAAGA               GGCGG ATACG CCGCC               CGTCAACCGATTTTC  72 70
        ghoS   28718 ..   28738 -    -6  -2.55722   ATACGAGCTAACGCA            CATCGCGG ACGCG CCGCGGCG            GGAATGGCACTTATT  53 36
IUJ39_RS00145   27740 ..   27769 -    -8  -4.19953   TATGTAAGCTGAAAA       TGCCGGATAA CGTGCGCAGC TTATCCGGCA        TGGGCGGTGTAGCTA  76 38
        hxpB   26322 ..   26346 - -12.2  -3.53012   TTTGTCTCTGTCAAA         GCCGCTT-GCC GTCT GGCTAAGCGGC          TAATCGCCTGTTTGC  88 58
IUJ39_RS00130   25536 ..   25550 -  -2.8  -3.78775   TTTTTTATTATGAAA               CGCT CTGTTTT AGCG               ATTCTGTTGCCGCAA  52 117
        tcyP   24014 ..   24048 -   -13  -4.45544   GCTGACTAAGCAAAA     TTAAAAGCGCCGGT CTCAAGT ACCGGCGCTTTTAG     TGACAAGCAATCTTT 100 91
        nadE   14888 ..   14912 -  -7.2  -2.64912   CGGGTAAGTGAGAAG          GCCGGATA GGCGAGTGA TATCCGGC          ACAACGGTAGAAGTA  57 44
         cho   13835 ..   13848 -  -8.1  -4.36127   CGCAAGAAGGTAAAA               TGCCG GCTG CGGCA                GAATAATTTTCCGCA  79 106
        xthA    5761 ..    5774 -  -2.3  -3.90112   GGCGGCTGAATCAAA               CGCGA AACG TCGCC                CAGACCGGCGCATGG  53 7
IUJ39_RS00030    4797 ..    4813 -  -3.1  -2.91264   TGTCTGATCCATAGA              TATAAAA ACC TCTTATA              TATTAATGTGGTTGT  44 479
        gdhA    3422 ..    3443 -  -4.3  -2.88945   GTCAGGCAGAATAAG           CGCAAAGCC ATCT GGCCTGACG            ACGGGATTAAATGAC   0 32
