locus-tag class description LFZ55_RS00005 PF11638 DnaA N-terminal domain LFZ55_RS00005 PF08299 Bacterial dnaA protein helix-turn-helix LFZ55_RS00005 PF00308 Bacterial dnaA protein LFZ55_RS00010 PF00712 DNA polymerase III beta subunit, N-terminal domain LFZ55_RS00010 PF02768 DNA polymerase III beta subunit, C-terminal domain LFZ55_RS00010 PF02767 DNA polymerase III beta subunit, central domain LFZ55_RS00015 PF02463 RecF/RecN/SMC N terminal domain LFZ55_RS00020 PF00204 DNA gyrase B LFZ55_RS00020 PF00986 DNA gyrase B subunit, carboxyl terminus LFZ55_RS00020 PF18053 DNA gyrase B subunit insert domain LFZ55_RS00020 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LFZ55_RS00020 PF01751 Toprim domain LFZ55_RS00040 PF06178 Oligogalacturonate-specific porin protein (KdgM) LFZ55_RS00045 PF07690 Major Facilitator Superfamily LFZ55_RS00060 PF07729 FCD domain LFZ55_RS00060 PF00392 Bacterial regulatory proteins, gntR family LFZ55_RS00065 PF05035 2-keto-3-deoxy-galactonokinase LFZ55_RS00070 PF01081 KDPG and KHG aldolase LFZ55_RS00075 PF13378 Enolase C-terminal domain-like LFZ55_RS00075 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain LFZ55_RS00080 PF07690 Major Facilitator Superfamily LFZ55_RS00085 PF00072 Response regulator receiver domain LFZ55_RS00085 PF01627 Hpt domain LFZ55_RS00085 PF00512 His Kinase A (phospho-acceptor) domain LFZ55_RS00085 PF00672 HAMP domain LFZ55_RS00085 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LFZ55_RS00090 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family LFZ55_RS00095 PF00072 Response regulator receiver domain LFZ55_RS00095 PF00486 Transcriptional regulatory protein, C terminal LFZ55_RS00100 PF03264 NapC/NirT cytochrome c family, N-terminal region LFZ55_RS00105 PF00384 Molybdopterin oxidoreductase LFZ55_RS00105 PF18364 Molybdopterin oxidoreductase N-terminal domain LFZ55_RS00105 PF01568 Molydopterin dinucleotide binding domain LFZ55_RS00110 PF02613 Nitrate reductase delta subunit LFZ55_RS00115 PF03150 Di-haem cytochrome c peroxidase LFZ55_RS00115 PF00034 Cytochrome c LFZ55_RS00115 PF14376 Haem-binding domain LFZ55_RS00120 PF00005 ABC transporter LFZ55_RS00125 PF03379 CcmB protein LFZ55_RS00130 PF01578 Cytochrome C assembly protein LFZ55_RS00135 PF04995 Heme exporter protein D (CcmD) LFZ55_RS00140 PF03100 CcmE LFZ55_RS00145 PF01578 Cytochrome C assembly protein LFZ55_RS00145 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal LFZ55_RS00150 PF08534 Redoxin LFZ55_RS00155 PF03918 Cytochrome C biogenesis protein LFZ55_RS00160 PF07676 WD40-like Beta Propeller Repeat LFZ55_RS00160 PF12566 Protein of unknown function (DUF3748) LFZ55_RS00165 PF07119 Protein of unknown function (DUF1375) LFZ55_RS00175 PF00011 Hsp20/alpha crystallin family LFZ55_RS00180 PF00011 Hsp20/alpha crystallin family LFZ55_RS00185 PF02080 TrkA-C domain LFZ55_RS00185 PF06826 Predicted Permease Membrane Region LFZ55_RS00190 PF02656 Domain of unknown function (DUF202) LFZ55_RS00195 PF02656 Domain of unknown function (DUF202) LFZ55_RS00205 PF00291 Pyridoxal-phosphate dependent enzyme LFZ55_RS00210 PF02447 GntP family permease LFZ55_RS00215 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LFZ55_RS00215 PF03466 LysR substrate binding domain LFZ55_RS00225 PF07690 Major Facilitator Superfamily LFZ55_RS00230 PF07282 Putative transposase DNA-binding domain LFZ55_RS00230 PF01385 Probable transposase LFZ55_RS00230 PF12323 Helix-turn-helix domain LFZ55_RS00240 PF13939 Toxin TisB, type I toxin-antitoxin system LFZ55_RS00250 PF08049 IlvB leader peptide LFZ55_RS00255 PF00205 Thiamine pyrophosphate enzyme, central domain LFZ55_RS00255 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain LFZ55_RS00255 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain LFZ55_RS00260 PF01842 ACT domain LFZ55_RS00265 PF00455 DeoR C terminal sensor domain LFZ55_RS00265 PF08220 DeoR-like helix-turn-helix domain LFZ55_RS00270 PF00294 pfkB family carbohydrate kinase LFZ55_RS00275 PF07690 Major Facilitator Superfamily LFZ55_RS00285 PF00072 Response regulator receiver domain LFZ55_RS00285 PF00196 Bacterial regulatory proteins, luxR family LFZ55_RS00290 PF05231 MASE1 LFZ55_RS00290 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LFZ55_RS00290 PF07730 Histidine kinase LFZ55_RS00295 PF07690 Major Facilitator Superfamily LFZ55_RS00300 PF07690 Major Facilitator Superfamily LFZ55_RS00305 PF06711 Protein of unknown function (DUF1198) LFZ55_RS00310 PF07690 Major Facilitator Superfamily LFZ55_RS00315 PF00232 Glycosyl hydrolase family 1 LFZ55_RS00325 PF00158 Sigma-54 interaction domain LFZ55_RS00325 PF00874 PRD domain LFZ55_RS00325 PF00158 Sigma-54 interaction domain LFZ55_RS00325 PF00874 PRD domain LFZ55_RS00330 PF03841 L-seryl-tRNA selenium transferase LFZ55_RS00340 PF04754 Putative transposase, YhgA-like LFZ55_RS00345 PF00892 EamA-like transporter family LFZ55_RS00350 PF02308 MgtC family LFZ55_RS00355 PF00690 Cation transporter/ATPase, N-terminus LFZ55_RS00355 PF00689 Cation transporting ATPase, C-terminus LFZ55_RS00365 PF00857 Isochorismatase family LFZ55_RS00375 PF00486 Transcriptional regulatory protein, C terminal LFZ55_RS00385 PF03797 Autotransporter beta-domain LFZ55_RS00390 PF00196 Bacterial regulatory proteins, luxR family LFZ55_RS00405 PF13304 AAA domain, putative AbiEii toxin, Type IV TA system LFZ55_RS00430 PF17345 Family of unknown function (DUF5375) LFZ55_RS00455 PF04606 Ogr/Delta-like zinc finger LFZ55_RS00480 PF14659 Phage integrase, N-terminal SAM-like domain LFZ55_RS00480 PF13356 Arm DNA-binding domain LFZ55_RS00480 PF00589 Phage integrase family LFZ55_RS00495 PF13802 Galactose mutarotase-like LFZ55_RS00495 PF01055 Glycosyl hydrolases family 31 LFZ55_RS00500 PF05170 AsmA family LFZ55_RS00505 PF00860 Permease family LFZ55_RS00510 PF03616 Sodium/glutamate symporter LFZ55_RS00515 PF00270 DEAD/DEAH box helicase LFZ55_RS00515 PF00271 Helicase conserved C-terminal domain LFZ55_RS00515 PF17191 RecG wedge domain LFZ55_RS00520 PF12105 SpoU, rRNA methylase, C-terminal LFZ55_RS00520 PF00588 SpoU rRNA Methylase family LFZ55_RS00525 PF13291 ACT domain LFZ55_RS00525 PF04607 Region found in RelA / SpoT proteins LFZ55_RS00525 PF02824 TGS domain LFZ55_RS00530 PF01192 RNA polymerase Rpb6 LFZ55_RS00535 PF00625 Guanylate kinase LFZ55_RS00540 PF01653 NAD-dependent DNA ligase adenylation domain LFZ55_RS00540 PF03120 NAD-dependent DNA ligase OB-fold domain LFZ55_RS00545 PF03458 UPF0126 domain LFZ55_RS00555 PF03466 LysR substrate binding domain LFZ55_RS00555 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LFZ55_RS00560 PF08340 Domain of unknown function (DUF1732) LFZ55_RS00560 PF03755 YicC-like family, N-terminal region LFZ55_RS00570 PF03725 3' exoribonuclease family, domain 2 LFZ55_RS00570 PF01138 3' exoribonuclease family, domain 1 LFZ55_RS00575 PF00156 Phosphoribosyl transferase domain LFZ55_RS00580 PF00440 Bacterial regulatory proteins, tetR family LFZ55_RS00585 PF00692 dUTPase LFZ55_RS00590 PF04127 DNA / pantothenate metabolism flavoprotein LFZ55_RS00590 PF02441 Flavoprotein LFZ55_RS00595 PF04002 RadC-like JAB domain LFZ55_RS00600 PF00830 Ribosomal L28 family LFZ55_RS00605 PF00471 Ribosomal protein L33 LFZ55_RS00610 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain LFZ55_RS00610 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain LFZ55_RS00610 PF06827 Zinc finger found in FPG and IleRS LFZ55_RS00615 PF01467 Cytidylyltransferase-like LFZ55_RS00620 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) LFZ55_RS00625 PF01075 Glycosyltransferase family 9 (heptosyltransferase) LFZ55_RS00630 PF13439 Glycosyltransferase Family 4 LFZ55_RS00630 PF00534 Glycosyl transferases group 1 LFZ55_RS00645 PF00534 Glycosyl transferases group 1 LFZ55_RS00645 PF13439 Glycosyltransferase Family 4 LFZ55_RS00650 PF08437 Glycosyl transferase family 8 C-terminal LFZ55_RS00650 PF01501 Glycosyl transferase family 8 LFZ55_RS00655 PF08437 Glycosyl transferase family 8 C-terminal LFZ55_RS00655 PF01501 Glycosyl transferase family 8 LFZ55_RS00660 PF06176 Lipopolysaccharide core biosynthesis protein (WaaY) LFZ55_RS00670 PF00534 Glycosyl transferases group 1 LFZ55_RS00675 PF04932 O-Antigen ligase LFZ55_RS00680 PF01075 Glycosyltransferase family 9 (heptosyltransferase) LFZ55_RS00685 PF01075 Glycosyltransferase family 9 (heptosyltransferase) LFZ55_RS00690 PF01370 NAD dependent epimerase/dehydratase family LFZ55_RS00695 PF00155 Aminotransferase class I and II LFZ55_RS00700 PF08240 Alcohol dehydrogenase GroES-like domain LFZ55_RS00700 PF00107 Zinc-binding dehydrogenase LFZ55_RS00710 PF00535 Glycosyl transferase family 2 LFZ55_RS00715 PF04748 Divergent polysaccharide deacetylase LFZ55_RS00720 PF01551 Peptidase family M23 LFZ55_RS00725 PF01676 Metalloenzyme superfamily LFZ55_RS00725 PF06415 BPG-independent PGAM N-terminus (iPGM_N) LFZ55_RS00730 PF00581 Rhodanese-like domain LFZ55_RS00735 PF00462 Glutaredoxin LFZ55_RS00740 PF02556 Preprotein translocase subunit SecB LFZ55_RS00745 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus LFZ55_RS00745 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus LFZ55_RS00750 PF00132 Bacterial transferase hexapeptide (six repeats) LFZ55_RS00750 PF06426 Serine acetyltransferase, N-terminal LFZ55_RS00755 PF00588 SpoU rRNA Methylase family LFZ55_RS00760 PF01070 FMN-dependent dehydrogenase LFZ55_RS00765 PF07729 FCD domain LFZ55_RS00765 PF00392 Bacterial regulatory proteins, gntR family LFZ55_RS00770 PF02652 L-lactate permease LFZ55_RS00775 PF10928 Protein of unknown function (DUF2810) LFZ55_RS00785 PF05068 Mannitol repressor LFZ55_RS00790 PF01232 Mannitol dehydrogenase Rossmann domain LFZ55_RS00790 PF08125 Mannitol dehydrogenase C-terminal domain LFZ55_RS00795 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit LFZ55_RS00795 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 LFZ55_RS00795 PF02378 Phosphotransferase system, EIIC LFZ55_RS00800 PF00043 Glutathione S-transferase, C-terminal domain LFZ55_RS00800 PF13417 Glutathione S-transferase, N-terminal domain LFZ55_RS00805 PF12390 Selenocysteine synthase N terminal LFZ55_RS00805 PF03841 L-seryl-tRNA selenium transferase LFZ55_RS00810 PF09107 Elongation factor SelB, winged helix LFZ55_RS00810 PF00009 Elongation factor Tu GTP binding domain LFZ55_RS00810 PF03144 Elongation factor Tu domain 2 LFZ55_RS00810 PF09106 Elongation factor SelB, winged helix LFZ55_RS00815 PF00465 Iron-containing alcohol dehydrogenase LFZ55_RS00820 PF00480 ROK family LFZ55_RS00825 PF00171 Aldehyde dehydrogenase family LFZ55_RS00830 PF00596 Class II Aldolase and Adducin N-terminal domain LFZ55_RS00835 PF01261 Xylose isomerase-like TIM barrel LFZ55_RS00840 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family LFZ55_RS00845 PF00370 FGGY family of carbohydrate kinases, N-terminal domain LFZ55_RS00845 PF02782 FGGY family of carbohydrate kinases, C-terminal domain LFZ55_RS00850 PF07690 Major Facilitator Superfamily LFZ55_RS00855 PF16154 Domain of unknown function (DUF4862) LFZ55_RS00860 PF04074 YhcH/YjgK/YiaL LFZ55_RS00865 PF02615 Malate/L-lactate dehydrogenase LFZ55_RS00870 PF01614 Bacterial transcriptional regulator LFZ55_RS00870 PF09339 IclR helix-turn-helix domain LFZ55_RS00875 PF13247 4Fe-4S dicluster domain LFZ55_RS00880 PF00155 Aminotransferase class I and II LFZ55_RS00885 PF00128 Alpha amylase, catalytic domain LFZ55_RS00890 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase LFZ55_RS00895 PF12833 Helix-turn-helix domain LFZ55_RS00910 PF02782 FGGY family of carbohydrate kinases, C-terminal domain LFZ55_RS00910 PF00370 FGGY family of carbohydrate kinases, N-terminal domain LFZ55_RS00915 PF05360 yiaA/B two helix domain LFZ55_RS00920 PF01757 Acyltransferase family LFZ55_RS00930 PF13983 YsaB-like lipoprotein LFZ55_RS00935 PF02091 Glycyl-tRNA synthetase alpha subunit LFZ55_RS00940 PF02092 Glycyl-tRNA synthetase beta subunit LFZ55_RS00940 PF05746 DALR anticodon binding domain LFZ55_RS00950 PF00313 'Cold-shock' DNA-binding domain LFZ55_RS00955 PF01381 Helix-turn-helix LFZ55_RS00960 PF11254 Protein of unknown function (DUF3053) LFZ55_RS00965 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain LFZ55_RS00965 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain LFZ55_RS00985 PF13488 Glycine zipper LFZ55_RS00985 PF00691 OmpA family LFZ55_RS00990 PF01568 Molydopterin dinucleotide binding domain LFZ55_RS00990 PF18364 Molybdopterin oxidoreductase N-terminal domain LFZ55_RS00990 PF00384 Molybdopterin oxidoreductase LFZ55_RS00995 PF00583 Acetyltransferase (GNAT) family LFZ55_RS01000 PF03352 Methyladenine glycosylase LFZ55_RS01005 PF03797 Autotransporter beta-domain LFZ55_RS01010 PF08019 Phosphoethanolamine transferase EptA/EptB LFZ55_RS01010 PF00884 Sulfatase LFZ55_RS01035 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle LFZ55_RS01040 PF00528 Binding-protein-dependent transport system inner membrane component LFZ55_RS01045 PF12911 N-terminal TM domain of oligopeptide transport permease C LFZ55_RS01045 PF00528 Binding-protein-dependent transport system inner membrane component LFZ55_RS01050 PF08352 Oligopeptide/dipeptide transporter, C-terminal region LFZ55_RS01050 PF00005 ABC transporter LFZ55_RS01055 PF08352 Oligopeptide/dipeptide transporter, C-terminal region LFZ55_RS01055 PF00005 ABC transporter LFZ55_RS01060 PF03222 Tryptophan/tyrosine permease family LFZ55_RS01065 PF01053 Cys/Met metabolism PLP-dependent enzyme LFZ55_RS01070 PF13940 Toxin Ldr, type I toxin-antitoxin system LFZ55_RS01075 PF11658 Cellulose biosynthesis protein BcsG LFZ55_RS01080 PF11120 Cellulose biosynthesis protein BcsF LFZ55_RS01085 PF10995 Cellulose biosynthesis GIL LFZ55_RS01090 PF10945 Cellulose biosynthesis protein BcsR LFZ55_RS01095 PF06564 Cellulose biosynthesis protein BcsQ LFZ55_RS01100 PF07238 PilZ domain LFZ55_RS01100 PF00535 Glycosyl transferase family 2 LFZ55_RS01100 PF03552 Cellulose synthase LFZ55_RS01105 PF03170 Bacterial cellulose synthase subunit LFZ55_RS01110 PF01270 Glycosyl hydrolases family 8 LFZ55_RS01115 PF05420 Cellulose synthase operon protein C C-terminus (BCSC_C) LFZ55_RS01115 PF13176 Tetratricopeptide repeat LFZ55_RS01125 PF17154 Gammaproteobacterial periplasmic sensor domain LFZ55_RS01125 PF00563 EAL domain LFZ55_RS01125 PF00672 HAMP domain LFZ55_RS01125 PF00990 Diguanylate cyclase, GGDEF domain LFZ55_RS01130 PF00375 Sodium:dicarboxylate symporter family LFZ55_RS01135 PF05193 Peptidase M16 inactive domain LFZ55_RS01135 PF00675 Insulinase (Peptidase family M16) LFZ55_RS01140 PF00294 pfkB family carbohydrate kinase LFZ55_RS01145 PF00563 EAL domain LFZ55_RS01150 PF05170 AsmA family LFZ55_RS01155 PF07690 Major Facilitator Superfamily LFZ55_RS01155 PF00083 Sugar (and other) transporter LFZ55_RS01160 PF03631 Virulence factor BrkB LFZ55_RS01165 PF03466 LysR substrate binding domain LFZ55_RS01165 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LFZ55_RS01175 PF00196 Bacterial regulatory proteins, luxR family LFZ55_RS01190 PF01204 Trehalase LFZ55_RS01195 PF07702 UTRA domain LFZ55_RS01195 PF00392 Bacterial regulatory proteins, gntR family LFZ55_RS01205 PF00710 Asparaginase, N-terminal LFZ55_RS01205 PF17763 Glutaminase/Asparaginase C-terminal domain LFZ55_RS01210 PF07992 Pyridine nucleotide-disulphide oxidoreductase LFZ55_RS01210 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain LFZ55_RS01215 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ LFZ55_RS01220 PF01569 PAP2 superfamily LFZ55_RS01225 PF01432 Peptidase family M3 LFZ55_RS01230 PF04445 Putative SAM-dependent methyltransferase LFZ55_RS01235 PF00834 Ribulose-phosphate 3 epimerase family LFZ55_RS01240 PF01380 SIS domain LFZ55_RS01245 PF13419 Haloacid dehalogenase-like hydrolase LFZ55_RS01250 PF00465 Iron-containing alcohol dehydrogenase LFZ55_RS01255 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 LFZ55_RS01255 PF00381 PTS HPr component phosphorylation site LFZ55_RS01260 PF01232 Mannitol dehydrogenase Rossmann domain LFZ55_RS01260 PF08125 Mannitol dehydrogenase C-terminal domain LFZ55_RS01265 PF08220 DeoR-like helix-turn-helix domain LFZ55_RS01265 PF00455 DeoR C terminal sensor domain LFZ55_RS01270 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 LFZ55_RS01275 PF02378 Phosphotransferase system, EIIC LFZ55_RS01275 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 LFZ55_RS01275 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit LFZ55_RS01280 PF00106 short chain dehydrogenase LFZ55_RS01290 PF07992 Pyridine nucleotide-disulphide oxidoreductase LFZ55_RS01295 PF02082 Transcriptional regulator LFZ55_RS01300 PF00854 POT family LFZ55_RS01305 PF00582 Universal stress protein family LFZ55_RS01310 PF10625 Universal stress protein B (UspB) LFZ55_RS01315 PF01384 Phosphate transporter family LFZ55_RS01325 PF13533 Biotin-lipoyl like LFZ55_RS01330 PF00005 ABC transporter LFZ55_RS01340 PF08753 NikR C terminal nickel binding domain LFZ55_RS01340 PF01402 Ribbon-helix-helix protein, copG family LFZ55_RS01345 PF01648 4'-phosphopantetheinyl transferase superfamily LFZ55_RS01350 PF01594 AI-2E family transporter LFZ55_RS01355 PF07690 Major Facilitator Superfamily LFZ55_RS01360 PF08786 DcrB LFZ55_RS01365 PF02592 Putative vitamin uptake transporter LFZ55_RS01370 PF01206 Sulfurtransferase TusA LFZ55_RS01375 PF02203 Tar ligand binding domain homologue LFZ55_RS01375 PF00672 HAMP domain LFZ55_RS01375 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain LFZ55_RS01380 PF00403 Heavy-metal-associated domain LFZ55_RS01385 PF07947 YhhN family LFZ55_RS01390 PF10694 Protein of unknown function (DUF2500) LFZ55_RS01395 PF06611 Protein of unknown function (DUF1145) LFZ55_RS01405 PF00448 SRP54-type protein, GTPase domain LFZ55_RS01405 PF02881 SRP54-type protein, helical bundle domain LFZ55_RS01410 PF00005 ABC transporter LFZ55_RS01415 PF18075 FtsX extracellular domain LFZ55_RS01415 PF02687 FtsX-like permease family LFZ55_RS01420 PF04545 Sigma-70, region 4 LFZ55_RS01420 PF04542 Sigma-70 region 2 LFZ55_RS01425 PF13458 Periplasmic binding protein LFZ55_RS01430 PF12568 Acetyltransferase (GNAT) domain, PanZ LFZ55_RS01435 PF13458 Periplasmic binding protein LFZ55_RS01440 PF02653 Branched-chain amino acid transport system / permease component LFZ55_RS01445 PF02653 Branched-chain amino acid transport system / permease component LFZ55_RS01445 PF11862 Domain of unknown function (DUF3382) LFZ55_RS01450 PF00005 ABC transporter LFZ55_RS01450 PF12399 Branched-chain amino acid ATP-binding cassette transporter LFZ55_RS01455 PF00005 ABC transporter LFZ55_RS01460 PF13416 Bacterial extracellular solute-binding protein LFZ55_RS01465 PF00528 Binding-protein-dependent transport system inner membrane component LFZ55_RS01470 PF00528 Binding-protein-dependent transport system inner membrane component LFZ55_RS01475 PF17912 MalK OB fold domain LFZ55_RS01475 PF00005 ABC transporter LFZ55_RS01480 PF03009 Glycerophosphoryl diester phosphodiesterase family LFZ55_RS01485 PF10956 Protein of unknown function (DUF2756) LFZ55_RS01495 PF02126 Phosphotriesterase family LFZ55_RS01510 PF00294 pfkB family carbohydrate kinase LFZ55_RS01515 PF00583 Acetyltransferase (GNAT) family LFZ55_RS01525 PF01408 Oxidoreductase family, NAD-binding Rossmann fold LFZ55_RS01525 PF02894 Oxidoreductase family, C-terminal alpha/beta domain LFZ55_RS01530 PF17954 Quercetinase C-terminal cupin domain LFZ55_RS01530 PF02678 Pirin LFZ55_RS01535 PF00356 Bacterial regulatory proteins, lacI family LFZ55_RS01535 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family LFZ55_RS01540 PF01202 Shikimate kinase LFZ55_RS01545 PF02447 GntP family permease LFZ55_RS01550 PF01914 MarC family integral membrane protein LFZ55_RS01555 PF01118 Semialdehyde dehydrogenase, NAD binding domain LFZ55_RS01555 PF02774 Semialdehyde dehydrogenase, dimerisation domain LFZ55_RS01560 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) LFZ55_RS01560 PF02806 Alpha amylase, C-terminal all-beta domain LFZ55_RS01560 PF00128 Alpha amylase, catalytic domain LFZ55_RS01565 PF18390 Glycogen debranching enzyme C-terminal domain LFZ55_RS01565 PF00128 Alpha amylase, catalytic domain LFZ55_RS01565 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) LFZ55_RS01570 PF00483 Nucleotidyl transferase LFZ55_RS01575 PF08323 Starch synthase catalytic domain LFZ55_RS01575 PF00534 Glycosyl transferases group 1 LFZ55_RS01580 PF00343 Carbohydrate phosphorylase LFZ55_RS01585 PF01266 FAD dependent oxidoreductase LFZ55_RS01585 PF16901 C-terminal domain of alpha-glycerophosphate oxidase LFZ55_RS01590 PF00581 Rhodanese-like domain LFZ55_RS01595 PF01694 Rhomboid family LFZ55_RS01595 PF12122 Cytoplasmic N-terminal domain of rhomboid serine protease LFZ55_RS01600 PF08220 DeoR-like helix-turn-helix domain LFZ55_RS01600 PF00455 DeoR C terminal sensor domain LFZ55_RS01605 PF00196 Bacterial regulatory proteins, luxR family LFZ55_RS01605 PF17874 MalT-like TPR region LFZ55_RS01610 PF00343 Carbohydrate phosphorylase LFZ55_RS01615 PF02446 4-alpha-glucanotransferase LFZ55_RS01620 PF02447 GntP family permease LFZ55_RS01625 PF01521 Iron-sulphur cluster biosynthesis LFZ55_RS01625 PF01106 NifU-like domain LFZ55_RS01630 PF00156 Phosphoribosyl transferase domain LFZ55_RS01635 PF00561 alpha/beta hydrolase fold LFZ55_RS01640 PF04754 Putative transposase, YhgA-like LFZ55_RS01645 PF09012 FeoC like transcriptional regulator LFZ55_RS01650 PF02421 Ferrous iron transport protein B LFZ55_RS01650 PF07664 Ferrous iron transport protein B C terminus LFZ55_RS01650 PF07670 Nucleoside recognition LFZ55_RS01650 PF17910 FeoB cytosolic helical domain LFZ55_RS01655 PF04023 FeoA domain LFZ55_RS01665 PF00575 S1 RNA binding domain LFZ55_RS01665 PF17674 HHH domain LFZ55_RS01665 PF09371 Tex-like protein N-terminal domain LFZ55_RS01665 PF16921 Tex protein YqgF-like domain LFZ55_RS01670 PF01272 Transcription elongation factor, GreA/GreB, C-term LFZ55_RS01670 PF03449 Transcription elongation factor, N-terminal LFZ55_RS01675 PF00072 Response regulator receiver domain LFZ55_RS01675 PF00486 Transcriptional regulatory protein, C terminal LFZ55_RS01680 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LFZ55_RS01680 PF00672 HAMP domain LFZ55_RS01680 PF00512 His Kinase A (phospho-acceptor) domain LFZ55_RS01685 PF01293 Phosphoenolpyruvate carboxykinase LFZ55_RS01690 PF13687 Domain of unknown function (DUF4153) LFZ55_RS01695 PF01430 Hsp33 protein LFZ55_RS01700 PF01479 S4 domain LFZ55_RS01705 PF13419 Haloacid dehalogenase-like hydrolase LFZ55_RS01710 PF07095 Intracellular growth attenuator protein IgaA LFZ55_RS01715 PF00293 NUDIX domain LFZ55_RS01720 PF17092 Penicillin-binding protein OB-like domain LFZ55_RS01720 PF00905 Penicillin binding protein transpeptidase domain LFZ55_RS01720 PF00912 Transglycosylase LFZ55_RS01730 PF05137 Fimbrial assembly protein (PilN) LFZ55_RS01740 PF10748 DNA utilization proteins HofP LFZ55_RS01745 PF03958 Bacterial type II/III secretion system short domain LFZ55_RS01745 PF00263 Bacterial type II and III secretion system protein LFZ55_RS01755 PF01202 Shikimate kinase LFZ55_RS01760 PF01761 3-dehydroquinate synthase LFZ55_RS01765 PF05036 Sporulation related domain LFZ55_RS01770 PF02086 D12 class N6 adenine-specific DNA methyltransferase LFZ55_RS01775 PF00834 Ribulose-phosphate 3 epimerase family LFZ55_RS01780 PF13419 Haloacid dehalogenase-like hydrolase LFZ55_RS01785 PF00579 tRNA synthetases class I (W and Y) LFZ55_RS01790 PF13978 Protein of unknown function (DUF4223) LFZ55_RS01800 PF14824 Sirohaem biosynthesis protein central LFZ55_RS01800 PF10414 Sirohaem synthase dimerisation region LFZ55_RS01800 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases LFZ55_RS01805 PF01226 Formate/nitrite transporter LFZ55_RS01810 PF13806 Rieske-like [2Fe-2S] domain LFZ55_RS01815 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain LFZ55_RS01815 PF04324 BFD-like [2Fe-2S] binding domain LFZ55_RS01815 PF18267 Rubredoxin NAD+ reductase C-terminal domain LFZ55_RS01815 PF07992 Pyridine nucleotide-disulphide oxidoreductase LFZ55_RS01815 PF01077 Nitrite and sulphite reductase 4Fe-4S domain LFZ55_RS01825 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD LFZ55_RS01830 PF10832 Protein of unknown function (DUF2559) LFZ55_RS01835 PF02661 Fic/DOC family LFZ55_RS01840 PF00117 Glutamine amidotransferase class-I LFZ55_RS01845 PF00202 Aminotransferase class-III LFZ55_RS01850 PF12805 FUSC-like inner membrane protein yccS LFZ55_RS01855 PF13545 Crp-like helix-turn-helix domain LFZ55_RS01855 PF00027 Cyclic nucleotide-binding domain LFZ55_RS01860 PF02566 OsmC-like protein LFZ55_RS01865 PF00485 Phosphoribulokinase / Uridine kinase family LFZ55_RS01870 PF06794 Uncharacterised protein family (UPF0270) LFZ55_RS01875 PF00561 alpha/beta hydrolase fold LFZ55_RS01880 PF08803 Putative mono-oxygenase ydhR LFZ55_RS01885 PF16957 Malonate decarboxylase, alpha subunit, transporter LFZ55_RS01890 PF01874 ATP:dephospho-CoA triphosphoribosyl transferase LFZ55_RS01895 PF06857 Malonate decarboxylase delta subunit (MdcD) LFZ55_RS01900 PF01039 Carboxyl transferase domain LFZ55_RS01910 PF03547 Membrane transport protein LFZ55_RS01915 PF10620 Phosphoribosyl-dephospho-CoA transferase MdcG LFZ55_RS01920 PF00698 Acyl transferase domain LFZ55_RS01925 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LFZ55_RS01925 PF03466 LysR substrate binding domain LFZ55_RS01930 PF00005 ABC transporter LFZ55_RS01930 PF12848 ABC transporter LFZ55_RS01935 PF02525 Flavodoxin-like fold LFZ55_RS01940 PF02254 TrkA-N domain LFZ55_RS01940 PF00999 Sodium/hydrogen exchanger family LFZ55_RS01945 PF09526 Probable metal-binding protein (DUF2387) LFZ55_RS01950 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase LFZ55_RS01955 PF04102 SlyX LFZ55_RS01960 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase LFZ55_RS01960 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase LFZ55_RS01965 PF08348 YheO-like PAS domain LFZ55_RS01965 PF13309 HTH domain LFZ55_RS01970 PF02635 DsrE/DsrF-like family LFZ55_RS01975 PF02635 DsrE/DsrF-like family LFZ55_RS01980 PF04077 DsrH like protein LFZ55_RS01985 PF00164 Ribosomal protein S12/S23 LFZ55_RS01990 PF00177 Ribosomal protein S7p/S5e LFZ55_RS01995 PF00679 Elongation factor G C-terminus LFZ55_RS01995 PF00009 Elongation factor Tu GTP binding domain LFZ55_RS01995 PF03764 Elongation factor G, domain IV LFZ55_RS01995 PF14492 Elongation Factor G, domain II LFZ55_RS01995 PF03144 Elongation factor Tu domain 2 LFZ55_RS02000 PF00009 Elongation factor Tu GTP binding domain LFZ55_RS02000 PF03144 Elongation factor Tu domain 2 LFZ55_RS02000 PF03143 Elongation factor Tu C-terminal domain LFZ55_RS02015 PF04324 BFD-like [2Fe-2S] binding domain LFZ55_RS02020 PF00210 Ferritin-like domain LFZ55_RS02025 PF01478 Type IV leader peptidase family LFZ55_RS02035 PF00338 Ribosomal protein S10p/S20e LFZ55_RS02040 PF00297 Ribosomal protein L3 LFZ55_RS02045 PF00573 Ribosomal protein L4/L1 family LFZ55_RS02050 PF00276 Ribosomal protein L23 LFZ55_RS02055 PF03947 Ribosomal Proteins L2, C-terminal domain LFZ55_RS02055 PF00181 Ribosomal Proteins L2, RNA binding domain LFZ55_RS02060 PF00203 Ribosomal protein S19 LFZ55_RS02065 PF00237 Ribosomal protein L22p/L17e LFZ55_RS02070 PF00189 Ribosomal protein S3, C-terminal domain LFZ55_RS02070 PF07650 KH domain LFZ55_RS02075 PF00252 Ribosomal protein L16p/L10e LFZ55_RS02080 PF00831 Ribosomal L29 protein LFZ55_RS02085 PF00366 Ribosomal protein S17 LFZ55_RS02090 PF00238 Ribosomal protein L14p/L23e LFZ55_RS02095 PF00467 KOW motif LFZ55_RS02095 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 LFZ55_RS02100 PF00281 Ribosomal protein L5 LFZ55_RS02100 PF00673 ribosomal L5P family C-terminus LFZ55_RS02105 PF00253 Ribosomal protein S14p/S29e LFZ55_RS02110 PF00410 Ribosomal protein S8 LFZ55_RS02115 PF00347 Ribosomal protein L6 LFZ55_RS02120 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast LFZ55_RS02125 PF00333 Ribosomal protein S5, N-terminal domain LFZ55_RS02125 PF03719 Ribosomal protein S5, C-terminal domain LFZ55_RS02130 PF00327 Ribosomal protein L30p/L7e LFZ55_RS02135 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A LFZ55_RS02140 PF00344 SecY translocase LFZ55_RS02145 PF00444 Ribosomal protein L36 LFZ55_RS02150 PF00416 Ribosomal protein S13/S18 LFZ55_RS02155 PF00411 Ribosomal protein S11 LFZ55_RS02160 PF01479 S4 domain LFZ55_RS02160 PF00163 Ribosomal protein S4/S9 N-terminal domain LFZ55_RS02165 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain LFZ55_RS02165 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain LFZ55_RS02165 PF01000 RNA polymerase Rpb3/RpoA insert domain LFZ55_RS02170 PF01196 Ribosomal protein L17 LFZ55_RS02175 PF09350 Domain of unknown function (DUF1992) LFZ55_RS02180 PF13411 MerR HTH family regulatory protein LFZ55_RS02185 PF03889 Alternative ribosome-rescue factor A LFZ55_RS02190 PF01741 Large-conductance mechanosensitive channel, MscL LFZ55_RS02195 PF02254 TrkA-N domain LFZ55_RS02195 PF02080 TrkA-C domain LFZ55_RS02200 PF01189 16S rRNA methyltransferase RsmB/F LFZ55_RS02200 PF01029 NusB family LFZ55_RS02205 PF00551 Formyl transferase LFZ55_RS02205 PF02911 Formyl transferase, C-terminal domain LFZ55_RS02210 PF01327 Polypeptide deformylase LFZ55_RS02215 PF02481 DNA recombination-mediator protein A LFZ55_RS02215 PF17782 DprA winged helix domain LFZ55_RS02220 PF04361 Protein of unknown function (DUF494) LFZ55_RS02225 PF01396 Topoisomerase DNA binding C4 zinc finger LFZ55_RS02230 PF01300 Telomere recombination LFZ55_RS02235 PF18317 Shikimate 5'-dehydrogenase C-terminal domain LFZ55_RS02235 PF01488 Shikimate / quinate 5-dehydrogenase LFZ55_RS02235 PF08501 Shikimate dehydrogenase substrate binding domain LFZ55_RS02240 PF07369 Protein of unknown function (DUF1488) LFZ55_RS02245 PF00132 Bacterial transferase hexapeptide (six repeats) LFZ55_RS02290 PF00873 AcrB/AcrD/AcrF family LFZ55_RS02295 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion LFZ55_RS02295 PF00529 HlyD membrane-fusion protein of T1SS LFZ55_RS02300 PF00440 Bacterial regulatory proteins, tetR family LFZ55_RS02300 PF08361 MAATS-type transcriptional repressor, C-terminal region LFZ55_RS02310 PF10831 Protein of unknown function (DUF2556) LFZ55_RS02315 PF01555 DNA methylase LFZ55_RS02320 PF02954 Bacterial regulatory protein, Fis family LFZ55_RS02325 PF01207 Dihydrouridine synthase (Dus) LFZ55_RS02335 PF00474 Sodium:solute symporter family LFZ55_RS02340 PF06196 Protein of unknown function (DUF997) LFZ55_RS02345 PF00289 Biotin carboxylase, N-terminal domain LFZ55_RS02345 PF02785 Biotin carboxylase C-terminal domain LFZ55_RS02345 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain LFZ55_RS02350 PF00364 Biotin-requiring enzyme LFZ55_RS02355 PF01794 Ferric reductase like transmembrane component LFZ55_RS02360 PF00174 Oxidoreductase molybdopterin binding domain LFZ55_RS02365 PF08240 Alcohol dehydrogenase GroES-like domain LFZ55_RS02365 PF00107 Zinc-binding dehydrogenase LFZ55_RS02370 PF17157 Gammaproteobacterial periplasmic sensor domain LFZ55_RS02370 PF00990 Diguanylate cyclase, GGDEF domain LFZ55_RS02370 PF00563 EAL domain LFZ55_RS02390 PF04085 rod shape-determining protein MreC LFZ55_RS02395 PF04093 rod shape-determining protein MreD LFZ55_RS02400 PF02545 Maf-like protein LFZ55_RS02405 PF10150 Ribonuclease E/G family LFZ55_RS02405 PF00575 S1 RNA binding domain LFZ55_RS02410 PF13502 AsmA-like C-terminal region LFZ55_RS02410 PF13116 Protein of unknown function LFZ55_RS02415 PF01523 Putative modulator of DNA gyrase LFZ55_RS02420 PF03466 LysR substrate binding domain LFZ55_RS02420 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LFZ55_RS02425 PF07869 Protein of unknown function (DUF1656) LFZ55_RS02430 PF13533 Biotin-lipoyl like LFZ55_RS02435 PF04632 Fusaric acid resistance protein family LFZ55_RS02440 PF01337 Barstar (barnase inhibitor) LFZ55_RS02445 PF07338 Protein of unknown function (DUF1471) LFZ55_RS02450 PF07338 Protein of unknown function (DUF1471) LFZ55_RS02455 PF01316 Arginine repressor, DNA binding domain LFZ55_RS02455 PF02863 Arginine repressor, C-terminal domain LFZ55_RS02460 PF00056 lactate/malate dehydrogenase, NAD binding domain LFZ55_RS02460 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain LFZ55_RS02465 PF13180 PDZ domain LFZ55_RS02470 PF00595 PDZ domain LFZ55_RS02470 PF13180 PDZ domain LFZ55_RS02475 PF06295 Protein of unknown function (DUF1043) LFZ55_RS02480 PF03969 AFG1-like ATPase LFZ55_RS02485 PF00572 Ribosomal protein L13 LFZ55_RS02490 PF00380 Ribosomal protein S9/S16 LFZ55_RS02500 PF00043 Glutathione S-transferase, C-terminal domain LFZ55_RS02500 PF02798 Glutathione S-transferase, N-terminal domain LFZ55_RS02505 PF04386 Stringent starvation protein B LFZ55_RS02510 PF00392 Bacterial regulatory proteins, gntR family LFZ55_RS02510 PF07729 FCD domain LFZ55_RS02515 PF00701 Dihydrodipicolinate synthetase family LFZ55_RS02520 PF07690 Major Facilitator Superfamily LFZ55_RS02525 PF04131 Putative N-acetylmannosamine-6-phosphate epimerase LFZ55_RS02530 PF00480 ROK family LFZ55_RS02535 PF04074 YhcH/YjgK/YiaL LFZ55_RS02540 PF07969 Amidohydrolase family LFZ55_RS02545 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin LFZ55_RS02555 PF07992 Pyridine nucleotide-disulphide oxidoreductase LFZ55_RS02555 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster LFZ55_RS02560 PF04898 Glutamate synthase central domain LFZ55_RS02560 PF01493 GXGXG motif LFZ55_RS02560 PF01645 Conserved region in glutamate synthase LFZ55_RS02560 PF00310 Glutamine amidotransferases class-II LFZ55_RS02575 PF04055 Radical SAM superfamily LFZ55_RS02575 PF16199 Radical_SAM C-terminal domain LFZ55_RS02580 PF01627 Hpt domain LFZ55_RS02580 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LFZ55_RS02580 PF00072 Response regulator receiver domain LFZ55_RS02580 PF00989 PAS fold LFZ55_RS02580 PF18415 Histidine kinase receptor ArcB trans-membrane domain LFZ55_RS02580 PF00512 His Kinase A (phospho-acceptor) domain LFZ55_RS02590 PF00912 Transglycosylase LFZ55_RS02595 PF10707 PhoP regulatory network protein YrbL LFZ55_RS02600 PF00381 PTS HPr component phosphorylation site LFZ55_RS02605 PF03668 P-loop ATPase protein family LFZ55_RS02610 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 LFZ55_RS02615 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein LFZ55_RS02620 PF04552 Sigma-54, DNA binding domain LFZ55_RS02620 PF04963 Sigma-54 factor, core binding domain LFZ55_RS02620 PF00309 Sigma-54 factor, Activator interacting domain (AID) LFZ55_RS02625 PF00005 ABC transporter LFZ55_RS02625 PF12399 Branched-chain amino acid ATP-binding cassette transporter LFZ55_RS02630 PF03968 OstA-like protein LFZ55_RS02635 PF06835 Lipopolysaccharide-assembly, LptC-related LFZ55_RS02645 PF01380 SIS domain LFZ55_RS02645 PF00571 CBS domain LFZ55_RS02650 PF01699 Sodium/calcium exchanger protein LFZ55_RS02655 PF00005 ABC transporter LFZ55_RS02660 PF02405 Permease MlaE LFZ55_RS02665 PF02470 MlaD protein LFZ55_RS02670 PF05494 MlaC protein LFZ55_RS02675 PF13466 STAS domain LFZ55_RS02680 PF01722 BolA-like protein LFZ55_RS02685 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) LFZ55_RS02690 PF13693 Winged helix-turn-helix DNA-binding LFZ55_RS02695 PF00348 Polyprenyl synthetase LFZ55_RS02700 PF00829 Ribosomal prokaryotic L21 protein LFZ55_RS02705 PF01016 Ribosomal L27 protein LFZ55_RS02710 PF00892 EamA-like transporter family LFZ55_RS02715 PF01926 50S ribosome-binding GTPase LFZ55_RS02715 PF01018 GTP1/OBG LFZ55_RS02720 PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family LFZ55_RS02725 PF01272 Transcription elongation factor, GreA/GreB, C-term LFZ55_RS02725 PF03449 Transcription elongation factor, N-terminal LFZ55_RS02730 PF01985 CRS1 / YhbY (CRM) domain LFZ55_RS02735 PF01728 FtsJ-like methyltransferase LFZ55_RS02745 PF00004 ATPase family associated with various cellular activities (AAA) LFZ55_RS02745 PF17862 AAA+ lid domain LFZ55_RS02745 PF01434 Peptidase family M41 LFZ55_RS02745 PF06480 FtsH Extracellular LFZ55_RS02750 PF00809 Pterin binding enzyme LFZ55_RS02755 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain LFZ55_RS02755 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III LFZ55_RS02755 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I LFZ55_RS02755 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II LFZ55_RS02760 PF03840 Preprotein translocase SecG subunit LFZ55_RS02770 PF00764 Arginosuccinate synthase LFZ55_RS02780 PF17384 RimP C-terminal SH3 domain LFZ55_RS02780 PF02576 RimP N-terminal domain LFZ55_RS02785 PF13184 NusA-like KH domain LFZ55_RS02785 PF08529 NusA N-terminal domain LFZ55_RS02790 PF11987 Translation-initiation factor 2 LFZ55_RS02790 PF08364 Bacterial translation initiation factor IF-2 associated region LFZ55_RS02790 PF04760 Translation initiation factor IF-2, N-terminal region LFZ55_RS02790 PF00009 Elongation factor Tu GTP binding domain LFZ55_RS02795 PF02033 Ribosome-binding factor A LFZ55_RS02800 PF01509 TruB family pseudouridylate synthase (N terminal domain) LFZ55_RS02800 PF16198 tRNA pseudouridylate synthase B C-terminal domain LFZ55_RS02800 PF09157 Pseudouridine synthase II TruB, C-terminal LFZ55_RS02805 PF00312 Ribosomal protein S15 LFZ55_RS02810 PF01138 3' exoribonuclease family, domain 1 LFZ55_RS02810 PF00575 S1 RNA binding domain LFZ55_RS02810 PF03725 3' exoribonuclease family, domain 2 LFZ55_RS02810 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain LFZ55_RS02810 PF00013 KH domain LFZ55_RS02815 PF07719 Tetratricopeptide repeat LFZ55_RS02815 PF13181 Tetratricopeptide repeat LFZ55_RS02820 PF00271 Helicase conserved C-terminal domain LFZ55_RS02820 PF12343 Cold shock protein DEAD box A LFZ55_RS02820 PF00270 DEAD/DEAH box helicase LFZ55_RS02820 PF03880 DbpA RNA binding domain LFZ55_RS02825 PF03222 Tryptophan/tyrosine permease family LFZ55_RS02830 PF00296 Luciferase-like monooxygenase LFZ55_RS02835 PF01136 Peptidase family U32 LFZ55_RS02840 PF01136 Peptidase family U32 LFZ55_RS02845 PF02036 SCP-2 sterol transfer family LFZ55_RS02850 PF13508 Acetyltransferase (GNAT) domain LFZ55_RS02855 PF01541 GIY-YIG catalytic domain LFZ55_RS02865 PF01965 DJ-1/PfpI family LFZ55_RS02870 PF13460 NAD(P)H-binding LFZ55_RS02875 PF04972 BON domain LFZ55_RS02880 PF13580 SIS domain LFZ55_RS02885 PF02021 Uncharacterised protein family UPF0102 LFZ55_RS02890 PF04348 LppC putative lipoprotein LFZ55_RS02895 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases LFZ55_RS02900 PF01116 Fructose-bisphosphate aldolase class-II LFZ55_RS02905 PF01380 SIS domain LFZ55_RS02910 PF01979 Amidohydrolase family LFZ55_RS02915 PF08013 Tagatose 6 phosphate kinase LFZ55_RS02920 PF00455 DeoR C terminal sensor domain LFZ55_RS02920 PF08220 DeoR-like helix-turn-helix domain LFZ55_RS02925 PF08666 SAF domain LFZ55_RS02925 PF04295 D-galactarate dehydratase / Altronate hydrolase, C terminus LFZ55_RS02930 PF03328 HpcH/HpaI aldolase/citrate lyase family LFZ55_RS02935 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase LFZ55_RS02935 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase LFZ55_RS02950 PF00486 Transcriptional regulatory protein, C terminal LFZ55_RS02970 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain LFZ55_RS02970 PF02753 Pili assembly chaperone PapD, C-terminal domain LFZ55_RS02975 PF13954 PapC N-terminal domain LFZ55_RS02975 PF13953 PapC C-terminal domain LFZ55_RS02975 PF00577 Outer membrane usher protein LFZ55_RS02990 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LFZ55_RS02990 PF03466 LysR substrate binding domain LFZ55_RS02995 PF00291 Pyridoxal-phosphate dependent enzyme LFZ55_RS03000 PF03222 Tryptophan/tyrosine permease family LFZ55_RS03005 PF00871 Acetokinase family LFZ55_RS03010 PF02901 Pyruvate formate lyase-like LFZ55_RS03010 PF01228 Glycine radical LFZ55_RS03015 PF03313 Serine dehydratase alpha chain LFZ55_RS03015 PF03315 Serine dehydratase beta chain LFZ55_RS03025 PF03313 Serine dehydratase alpha chain LFZ55_RS03035 PF17954 Quercetinase C-terminal cupin domain LFZ55_RS03035 PF02678 Pirin LFZ55_RS03040 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LFZ55_RS03040 PF03466 LysR substrate binding domain LFZ55_RS03045 PF05656 Protein of unknown function (DUF805) LFZ55_RS03050 PF13409 Glutathione S-transferase, N-terminal domain LFZ55_RS03055 PF07681 DoxX LFZ55_RS03060 PF13997 YqjK-like protein LFZ55_RS03065 PF07332 Putative Actinobacterial Holin-X, holin superfamily III LFZ55_RS03070 PF05957 Bacterial protein of unknown function (DUF883) LFZ55_RS03075 PF06476 Protein of unknown function (DUF1090) LFZ55_RS03080 PF13721 SecD export protein N-terminal TM region LFZ55_RS03085 PF09335 SNARE associated Golgi protein LFZ55_RS03090 PF07729 FCD domain LFZ55_RS03090 PF00392 Bacterial regulatory proteins, gntR family LFZ55_RS03095 PF07690 Major Facilitator Superfamily LFZ55_RS03100 PF02614 Glucuronate isomerase LFZ55_RS03105 PF04295 D-galactarate dehydratase / Altronate hydrolase, C terminus LFZ55_RS03105 PF08666 SAF domain LFZ55_RS03110 PF00375 Sodium:dicarboxylate symporter family LFZ55_RS03115 PF03741 Integral membrane protein TerC family LFZ55_RS03120 PF01408 Oxidoreductase family, NAD-binding Rossmann fold LFZ55_RS03125 PF01863 Protein of unknown function DUF45 LFZ55_RS03130 PF05175 Methyltransferase small domain LFZ55_RS03135 PF00724 NADH:flavin oxidoreductase / NADH oxidase family LFZ55_RS03135 PF07992 Pyridine nucleotide-disulphide oxidoreductase LFZ55_RS03140 PF00202 Aminotransferase class-III LFZ55_RS03145 PF08447 PAS fold LFZ55_RS03145 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain LFZ55_RS03150 PF02203 Tar ligand binding domain homologue LFZ55_RS03150 PF00672 HAMP domain LFZ55_RS03150 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain LFZ55_RS03155 PF03551 Transcriptional regulator PadR-like family LFZ55_RS03160 PF04954 Siderophore-interacting protein LFZ55_RS03160 PF08021 Siderophore-interacting FAD-binding domain LFZ55_RS03170 PF03167 Uracil DNA glycosylase superfamily LFZ55_RS03175 PF04545 Sigma-70, region 4 LFZ55_RS03175 PF04539 Sigma-70 region 3 LFZ55_RS03175 PF04542 Sigma-70 region 2 LFZ55_RS03175 PF04546 Sigma-70, non-essential region LFZ55_RS03175 PF03979 Sigma-70 factor, region 1.1 LFZ55_RS03175 PF00140 Sigma-70 factor, region 1.2 LFZ55_RS03180 PF10410 DnaB-helicase binding domain of primase LFZ55_RS03180 PF01807 CHC2 zinc finger LFZ55_RS03180 PF08275 DNA primase catalytic core, N-terminal domain LFZ55_RS03180 PF08278 DNA primase DnaG DnaB-binding LFZ55_RS03185 PF01165 Ribosomal protein S21 LFZ55_RS03195 PF00814 Glycoprotease family LFZ55_RS03205 PF00939 Sodium:sulfate symporter transmembrane region LFZ55_RS03210 PF05683 Fumarase C-terminus LFZ55_RS03215 PF05681 Fumarate hydratase (Fumerase) LFZ55_RS03220 PF03466 LysR substrate binding domain LFZ55_RS03220 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LFZ55_RS03225 PF02660 Glycerol-3-phosphate acyltransferase LFZ55_RS03230 PF02152 Dihydroneopterin aldolase LFZ55_RS03235 PF02673 Bacitracin resistance protein BacA LFZ55_RS03240 PF12627 Probable RNA and SrmB- binding site of polymerase A LFZ55_RS03240 PF01743 Poly A polymerase head domain LFZ55_RS03240 PF01966 HD domain LFZ55_RS03245 PF08239 Bacterial SH3 domain LFZ55_RS03250 PF01928 CYTH domain LFZ55_RS03255 PF03710 Glutamate-ammonia ligase adenylyltransferase LFZ55_RS03255 PF08335 GlnD PII-uridylyltransferase LFZ55_RS03260 PF01467 Cytidylyltransferase-like LFZ55_RS03260 PF00294 pfkB family carbohydrate kinase LFZ55_RS03265 PF08971 Glycogen synthesis protein LFZ55_RS03270 PF04380 Membrane fusogenic activity LFZ55_RS03275 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase LFZ55_RS03280 PF02600 Disulfide bond formation protein DsbB LFZ55_RS03295 PF02535 ZIP Zinc transporter LFZ55_RS03300 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase LFZ55_RS03305 PF03738 Glutathionylspermidine synthase preATP-grasp LFZ55_RS03310 PF06693 Protein of unknown function (DUF1190) LFZ55_RS03320 PF02321 Outer membrane efflux protein LFZ55_RS03325 PF00293 NUDIX domain LFZ55_RS03330 PF06853 Protein of unknown function (DUF1249) LFZ55_RS03335 PF00149 Calcineurin-like phosphoesterase LFZ55_RS03340 PF05728 Uncharacterised protein family (UPF0227) LFZ55_RS03345 PF01751 Toprim domain LFZ55_RS03345 PF00204 DNA gyrase B LFZ55_RS03345 PF00986 DNA gyrase B subunit, carboxyl terminus LFZ55_RS03345 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LFZ55_RS03350 PF03992 Antibiotic biosynthesis monooxygenase LFZ55_RS03355 PF02525 Flavodoxin-like fold LFZ55_RS03360 PF08521 Two-component sensor kinase N-terminal LFZ55_RS03360 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LFZ55_RS03360 PF00512 His Kinase A (phospho-acceptor) domain LFZ55_RS03365 PF00072 Response regulator receiver domain LFZ55_RS03365 PF00486 Transcriptional regulatory protein, C terminal LFZ55_RS03370 PF04076 Bacterial OB fold (BOF) protein LFZ55_RS03375 PF00521 DNA gyrase/topoisomerase IV, subunit A LFZ55_RS03375 PF03989 DNA gyrase C-terminal domain, beta-propeller LFZ55_RS03380 PF01553 Acyltransferase LFZ55_RS03385 PF07731 Multicopper oxidase LFZ55_RS03385 PF00394 Multicopper oxidase LFZ55_RS03385 PF07732 Multicopper oxidase LFZ55_RS03390 PF04055 Radical SAM superfamily LFZ55_RS03390 PF08497 Radical SAM N-terminal LFZ55_RS03390 PF11842 Domain of unknown function (DUF3362) LFZ55_RS03400 PF00939 Sodium:sulfate symporter transmembrane region LFZ55_RS03405 PF00248 Aldo/keto reductase family LFZ55_RS03410 PF00465 Iron-containing alcohol dehydrogenase LFZ55_RS03415 PF12833 Helix-turn-helix domain LFZ55_RS03415 PF06719 AraC-type transcriptional regulator N-terminus LFZ55_RS03420 PF09335 SNARE associated Golgi protein LFZ55_RS03425 PF01053 Cys/Met metabolism PLP-dependent enzyme LFZ55_RS03435 PF01618 MotA/TolQ/ExbB proton channel family LFZ55_RS03440 PF02472 Biopolymer transport protein ExbD/TolR LFZ55_RS03465 PF03350 Uncharacterized protein family, UPF0114 LFZ55_RS03470 PF00672 HAMP domain LFZ55_RS03470 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain LFZ55_RS03470 PF02203 Tar ligand binding domain homologue LFZ55_RS03475 PF11115 Protein of unknown function (DUF2623) LFZ55_RS03485 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit LFZ55_RS03485 PF14720 NiFe/NiFeSe hydrogenase small subunit C-terminal LFZ55_RS03490 PF13247 4Fe-4S dicluster domain LFZ55_RS03495 PF03916 Polysulphide reductase, NrfD LFZ55_RS03500 PF00374 Nickel-dependent hydrogenase LFZ55_RS03505 PF01750 Hydrogenase maturation protease LFZ55_RS03510 PF11939 [NiFe]-hydrogenase assembly, chaperone, HybE LFZ55_RS03515 PF01155 Hydrogenase/urease nickel incorporation, metallochaperone, hypA LFZ55_RS03520 PF01455 HupF/HypC family LFZ55_RS03525 PF01497 Periplasmic binding protein LFZ55_RS03535 PF02798 Glutathione S-transferase, N-terminal domain LFZ55_RS03540 PF05257 CHAP domain LFZ55_RS03540 PF03738 Glutathionylspermidine synthase preATP-grasp LFZ55_RS03550 PF02614 Glucuronate isomerase LFZ55_RS03555 PF08125 Mannitol dehydrogenase C-terminal domain LFZ55_RS03555 PF01232 Mannitol dehydrogenase Rossmann domain LFZ55_RS03560 PF03786 D-mannonate dehydratase (UxuA) LFZ55_RS03570 PF07690 Major Facilitator Superfamily LFZ55_RS03575 PF03573 outer membrane porin, OprD family LFZ55_RS03585 PF02837 Glycosyl hydrolases family 2, sugar binding domain LFZ55_RS03585 PF00703 Glycosyl hydrolases family 2 LFZ55_RS03585 PF02836 Glycosyl hydrolases family 2, TIM barrel domain LFZ55_RS03590 PF00440 Bacterial regulatory proteins, tetR family LFZ55_RS03600 PF01522 Polysaccharide deacetylase LFZ55_RS03610 PF04965 Gene 25-like lysozyme LFZ55_RS03615 PF00171 Aldehyde dehydrogenase family LFZ55_RS03620 PF01266 FAD dependent oxidoreductase LFZ55_RS03630 PF13520 Amino acid permease LFZ55_RS03640 PF00196 Bacterial regulatory proteins, luxR family LFZ55_RS03645 PF04055 Radical SAM superfamily LFZ55_RS03650 PF00884 Sulfatase LFZ55_RS03655 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LFZ55_RS03655 PF03466 LysR substrate binding domain LFZ55_RS03660 PF03328 HpcH/HpaI aldolase/citrate lyase family LFZ55_RS03665 PF01575 MaoC like domain LFZ55_RS03670 PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain LFZ55_RS03670 PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain LFZ55_RS03675 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily LFZ55_RS03715 PF13693 Winged helix-turn-helix DNA-binding LFZ55_RS03735 PF13356 Arm DNA-binding domain LFZ55_RS03735 PF00589 Phage integrase family LFZ55_RS03745 PF04474 Protein of unknown function (DUF554) LFZ55_RS03755 PF01276 Orn/Lys/Arg decarboxylase, major domain LFZ55_RS03755 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain LFZ55_RS03755 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain LFZ55_RS03760 PF03825 Nucleoside H+ symporter LFZ55_RS03765 PF01464 Transglycosylase SLT domain LFZ55_RS03765 PF11873 Membrane-bound lytic murein transglycosylase C, N-terminal domain LFZ55_RS03770 PF04362 Bacterial Fe(2+) trafficking LFZ55_RS03775 PF14815 NUDIX domain LFZ55_RS03775 PF00730 HhH-GPD superfamily base excision DNA repair protein LFZ55_RS03775 PF00633 Helix-hairpin-helix motif LFZ55_RS03785 PF02390 Putative methyltransferase LFZ55_RS03790 PF04320 Protein with unknown function (DUF469) LFZ55_RS03795 PF11101 Protein of unknown function (DUF2884) LFZ55_RS03800 PF17763 Glutaminase/Asparaginase C-terminal domain LFZ55_RS03800 PF00710 Asparaginase, N-terminal LFZ55_RS03805 PF04055 Radical SAM superfamily LFZ55_RS03805 PF06969 HemN C-terminal domain LFZ55_RS03810 PF01725 Ham1 family LFZ55_RS03815 PF02594 Uncharacterised ACR, YggU family COG1872 LFZ55_RS03820 PF02325 YGGT family LFZ55_RS03825 PF01168 Alanine racemase, N-terminal domain LFZ55_RS03830 PF00437 Type II/IV secretion system protein LFZ55_RS03840 PF03652 Holliday junction resolvase LFZ55_RS03845 PF02622 Uncharacterized ACR, COG1678 LFZ55_RS03850 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain LFZ55_RS03850 PF02951 Prokaryotic glutathione synthetase, N-terminal domain LFZ55_RS03855 PF04452 RNA methyltransferase LFZ55_RS03860 PF04231 Endonuclease I LFZ55_RS03865 PF10263 SprT-like family LFZ55_RS03865 PF17283 SprT-like zinc ribbon domain LFZ55_RS03870 PF00083 Sugar (and other) transporter LFZ55_RS03875 PF02772 S-adenosylmethionine synthetase, central domain LFZ55_RS03875 PF02773 S-adenosylmethionine synthetase, C-terminal domain LFZ55_RS03875 PF00438 S-adenosylmethionine synthetase, N-terminal domain LFZ55_RS03890 PF11036 Virulence promoting factor LFZ55_RS03895 PF17810 Arginine decarboxylase helical bundle domain LFZ55_RS03895 PF17944 Arginine decarboxylase C-terminal helical extension LFZ55_RS03895 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain LFZ55_RS03900 PF00491 Arginase family LFZ55_RS03905 PF01435 Peptidase family M48 LFZ55_RS03910 PF02779 Transketolase, pyrimidine binding domain LFZ55_RS03910 PF02780 Transketolase, C-terminal domain LFZ55_RS03910 PF00456 Transketolase, thiamine diphosphate binding domain LFZ55_RS03915 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 LFZ55_RS03920 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit LFZ55_RS03920 PF02378 Phosphotransferase system, EIIC LFZ55_RS03925 PF00107 Zinc-binding dehydrogenase LFZ55_RS03925 PF08240 Alcohol dehydrogenase GroES-like domain LFZ55_RS03930 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded LFZ55_RS03935 PF05068 Mannitol repressor LFZ55_RS03945 PF00005 ABC transporter LFZ55_RS03950 PF00005 ABC transporter LFZ55_RS03975 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain LFZ55_RS03975 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain LFZ55_RS03980 PF00162 Phosphoglycerate kinase LFZ55_RS03985 PF01116 Fructose-bisphosphate aldolase class-II LFZ55_RS03990 PF05552 Conserved TM helix LFZ55_RS03990 PF00924 Mechanosensitive ion channel LFZ55_RS03995 PF01810 LysE type translocator LFZ55_RS04000 PF04402 Protein of unknown function (DUF541) LFZ55_RS04005 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LFZ55_RS04005 PF03466 LysR substrate binding domain LFZ55_RS04010 PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain LFZ55_RS04010 PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain LFZ55_RS04015 PF00378 Enoyl-CoA hydratase/isomerase LFZ55_RS04025 PF01642 Methylmalonyl-CoA mutase LFZ55_RS04025 PF02310 B12 binding domain LFZ55_RS04035 PF03466 LysR substrate binding domain LFZ55_RS04035 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LFZ55_RS04040 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) LFZ55_RS04045 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain LFZ55_RS04045 PF01842 ACT domain LFZ55_RS04045 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain LFZ55_RS04050 PF01812 5-formyltetrahydrofolate cyclo-ligase family LFZ55_RS04060 PF05164 Cell division protein ZapA LFZ55_RS04070 PF03695 Uncharacterised protein family (UPF0149) LFZ55_RS04075 PF00557 Metallopeptidase family M24 LFZ55_RS04075 PF05195 Aminopeptidase P, N-terminal domain LFZ55_RS04080 PF01494 FAD binding domain LFZ55_RS04085 PF01494 FAD binding domain LFZ55_RS04090 PF08669 Glycine cleavage T-protein C-terminal barrel domain LFZ55_RS04090 PF01571 Aminomethyltransferase folate-binding domain LFZ55_RS04095 PF01597 Glycine cleavage H-protein LFZ55_RS04100 PF02347 Glycine cleavage system P-protein LFZ55_RS04105 PF00232 Glycosyl hydrolase family 1 LFZ55_RS04110 PF04266 ASCH domain LFZ55_RS04115 PF03006 Haemolysin-III related LFZ55_RS04120 PF01571 Aminomethyltransferase folate-binding domain LFZ55_RS04130 PF03937 Flavinator of succinate dehydrogenase LFZ55_RS04135 PF07254 Membrane-bound toxin component of toxin-antitoxin system LFZ55_RS04140 PF00258 Flavodoxin LFZ55_RS04145 PF00589 Phage integrase family LFZ55_RS04145 PF02899 Phage integrase, N-terminal SAM-like domain LFZ55_RS04150 PF13098 Thioredoxin-like domain LFZ55_RS04150 PF10411 Disulfide bond isomerase protein N-terminus LFZ55_RS04155 PF01368 DHH family LFZ55_RS04155 PF17768 RecJ OB domain LFZ55_RS04155 PF02272 DHHA1 domain LFZ55_RS04165 PF01336 OB-fold nucleic acid binding domain LFZ55_RS04165 PF00152 tRNA synthetases class II (D, K and N) LFZ55_RS04170 PF00293 NUDIX domain LFZ55_RS04175 PF01551 Peptidase family M23 LFZ55_RS04175 PF01476 LysM domain LFZ55_RS04240 PF13505 Outer membrane protein beta-barrel domain LFZ55_RS04250 PF16970 Type-1 fimbrial protein, A LFZ55_RS04255 PF13954 PapC N-terminal domain LFZ55_RS04255 PF00577 Outer membrane usher protein LFZ55_RS04255 PF13953 PapC C-terminal domain LFZ55_RS04260 PF02753 Pili assembly chaperone PapD, C-terminal domain LFZ55_RS04260 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain LFZ55_RS04280 PF00080 Copper/zinc superoxide dismutase (SODC) LFZ55_RS04285 PF03212 Pertactin LFZ55_RS04285 PF03797 Autotransporter beta-domain LFZ55_RS04285 PF16168 Adhesin of bacterial autotransporter system, probable stalk LFZ55_RS04290 PF06445 GyrI-like small molecule binding domain LFZ55_RS04290 PF12833 Helix-turn-helix domain LFZ55_RS04295 PF03824 High-affinity nickel-transport protein LFZ55_RS04300 PF02583 Metal-sensitive transcriptional repressor LFZ55_RS04305 PF03222 Tryptophan/tyrosine permease family LFZ55_RS04315 PF03466 LysR substrate binding domain LFZ55_RS04315 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LFZ55_RS04320 PF02803 Thiolase, C-terminal domain LFZ55_RS04320 PF00108 Thiolase, N-terminal domain LFZ55_RS04330 PF04962 KduI/IolB family LFZ55_RS04340 PF00083 Sugar (and other) transporter LFZ55_RS04345 PF01177 Asp/Glu/Hydantoin racemase LFZ55_RS04350 PF03466 LysR substrate binding domain LFZ55_RS04350 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LFZ55_RS04355 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain LFZ55_RS04355 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain LFZ55_RS04360 PF00356 Bacterial regulatory proteins, lacI family LFZ55_RS04365 PF00356 Bacterial regulatory proteins, lacI family LFZ55_RS04375 PF00501 AMP-binding enzyme LFZ55_RS04375 PF01553 Acyltransferase LFZ55_RS04380 PF07690 Major Facilitator Superfamily LFZ55_RS04385 PF00248 Aldo/keto reductase family LFZ55_RS04390 PF06004 Bacterial protein of unknown function (DUF903) LFZ55_RS04395 PF03741 Integral membrane protein TerC family LFZ55_RS04405 PF02976 DNA mismatch repair enzyme MutH LFZ55_RS04410 PF00293 NUDIX domain LFZ55_RS04415 PF00391 PEP-utilising enzyme, mobile domain LFZ55_RS04415 PF01590 GAF domain LFZ55_RS04415 PF05524 PEP-utilising enzyme, N-terminal LFZ55_RS04415 PF02896 PEP-utilising enzyme, TIM barrel domain LFZ55_RS04425 PF01790 Prolipoprotein diacylglyceryl transferase LFZ55_RS04430 PF00303 Thymidylate synthase LFZ55_RS04440 PF07963 Prokaryotic N-terminal methylation motif LFZ55_RS04445 PF07963 Prokaryotic N-terminal methylation motif LFZ55_RS04450 PF10713 Protein of unknown function (DUF2509) LFZ55_RS04455 PF07963 Prokaryotic N-terminal methylation motif LFZ55_RS04455 PF12528 Type II secretion prepilin peptidase dependent protein C LFZ55_RS04460 PF17946 RecC C-terminal domain LFZ55_RS04465 PF16187 Middle or third domain of peptidase_M16 LFZ55_RS04465 PF05193 Peptidase M16 inactive domain LFZ55_RS04465 PF00675 Insulinase (Peptidase family M16) LFZ55_RS04470 PF12705 PD-(D/E)XK nuclease superfamily LFZ55_RS04470 PF13361 UvrD-like helicase C-terminal domain LFZ55_RS04470 PF00580 UvrD/REP helicase N-terminal domain LFZ55_RS04475 PF13538 UvrD-like helicase C-terminal domain LFZ55_RS04480 PF00696 Amino acid kinase family LFZ55_RS04480 PF00583 Acetyltransferase (GNAT) family LFZ55_RS04485 PF01520 N-acetylmuramoyl-L-alanine amidase LFZ55_RS04485 PF11741 AMIN domain LFZ55_RS04500 PF03562 MltA specific insert domain LFZ55_RS04500 PF06725 3D domain LFZ55_RS04505 PF00899 ThiF family LFZ55_RS04510 PF00892 EamA-like transporter family LFZ55_RS04515 PF02657 Fe-S metabolism associated domain LFZ55_RS04520 PF00266 Aminotransferase class-V LFZ55_RS04525 PF06004 Bacterial protein of unknown function (DUF903) LFZ55_RS04530 PF03466 LysR substrate binding domain LFZ55_RS04530 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LFZ55_RS04535 PF04241 Protein of unknown function (DUF423) LFZ55_RS04540 PF01728 FtsJ-like methyltransferase LFZ55_RS04540 PF18125 RlmM ferredoxin-like domain LFZ55_RS04545 PF08220 DeoR-like helix-turn-helix domain LFZ55_RS04545 PF00455 DeoR C terminal sensor domain LFZ55_RS04550 PF05025 RbsD / FucU transport protein family LFZ55_RS04555 PF00370 FGGY family of carbohydrate kinases, N-terminal domain LFZ55_RS04555 PF02782 FGGY family of carbohydrate kinases, C-terminal domain LFZ55_RS04560 PF02952 L-fucose isomerase, C-terminal domain LFZ55_RS04560 PF07881 L-fucose isomerase, first N-terminal domain LFZ55_RS04560 PF07882 L-fucose isomerase, second N-terminal domain LFZ55_RS04565 PF07690 Major Facilitator Superfamily LFZ55_RS04570 PF00596 Class II Aldolase and Adducin N-terminal domain LFZ55_RS04575 PF00465 Iron-containing alcohol dehydrogenase LFZ55_RS04580 PF01367 5'-3' exonuclease, C-terminal SAM fold LFZ55_RS04580 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain LFZ55_RS04585 PF03313 Serine dehydratase alpha chain LFZ55_RS04585 PF03315 Serine dehydratase beta chain LFZ55_RS04595 PF03641 Possible lysine decarboxylase LFZ55_RS04595 PF14793 Pyrimidine/purine nucleotide 5'-monophosphate nucleosidases LFZ55_RS04595 PF11892 Domain of unknown function (DUF3412) LFZ55_RS04600 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term LFZ55_RS04600 PF14489 QueF-like protein LFZ55_RS04605 PF07348 Syd protein (SUKH-2) LFZ55_RS04610 PF04287 tRNA pseudouridine synthase C LFZ55_RS04615 PF00849 RNA pseudouridylate synthase LFZ55_RS04620 PF00258 Flavodoxin LFZ55_RS04630 PF07690 Major Facilitator Superfamily LFZ55_RS04635 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain LFZ55_RS04635 PF13378 Enolase C-terminal domain-like LFZ55_RS04640 PF13378 Enolase C-terminal domain-like LFZ55_RS04645 PF02595 Glycerate kinase family LFZ55_RS04650 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) LFZ55_RS04650 PF00072 Response regulator receiver domain LFZ55_RS04650 PF01627 Hpt domain LFZ55_RS04650 PF00672 HAMP domain LFZ55_RS04650 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LFZ55_RS04650 PF00512 His Kinase A (phospho-acceptor) domain LFZ55_RS04655 PF01938 TRAM domain LFZ55_RS04655 PF05958 tRNA (Uracil-5-)-methyltransferase LFZ55_RS04660 PF13291 ACT domain LFZ55_RS04660 PF04607 Region found in RelA / SpoT proteins LFZ55_RS04660 PF02824 TGS domain LFZ55_RS04665 PF03819 MazG nucleotide pyrophosphohydrolase domain LFZ55_RS04670 PF00117 Glutamine amidotransferase class-I LFZ55_RS04670 PF06418 CTP synthase N-terminus LFZ55_RS04675 PF03952 Enolase, N-terminal domain LFZ55_RS04675 PF00113 Enolase, C-terminal TIM barrel domain LFZ55_RS04680 PF04055 Radical SAM superfamily LFZ55_RS04685 PF03099 Biotin/lipoate A/B protein ligase family LFZ55_RS04685 PF12706 Beta-lactamase superfamily domain LFZ55_RS04690 PF01242 6-pyruvoyl tetrahydropterin synthase LFZ55_RS04700 PF00258 Flavodoxin LFZ55_RS04700 PF00175 Oxidoreductase NAD-binding domain LFZ55_RS04700 PF00667 FAD binding domain LFZ55_RS04705 PF01077 Nitrite and sulphite reductase 4Fe-4S domain LFZ55_RS04705 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain LFZ55_RS04715 PF01507 Phosphoadenosine phosphosulfate reductase family LFZ55_RS04720 PF11047 Salmonella outer protein D LFZ55_RS04730 PF18019 HD domain LFZ55_RS04730 PF00271 Helicase conserved C-terminal domain LFZ55_RS04730 PF00270 DEAD/DEAH box helicase LFZ55_RS04735 PF09481 CRISPR-associated protein Cse1 (CRISPR_cse1) LFZ55_RS04745 PF09344 CT1975-like protein LFZ55_RS04750 PF09704 CRISPR-associated protein (Cas_Cas5) LFZ55_RS04760 PF01867 CRISPR associated protein Cas1 LFZ55_RS04765 PF09707 CRISPR-associated protein (Cas_Cas2CT1978) LFZ55_RS04770 PF04389 Peptidase family M28 LFZ55_RS04775 PF01507 Phosphoadenosine phosphosulfate reductase family LFZ55_RS04780 PF00009 Elongation factor Tu GTP binding domain LFZ55_RS04790 PF12084 Protein of unknown function (DUF3561) LFZ55_RS04795 PF04977 Septum formation initiator LFZ55_RS04800 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase LFZ55_RS04805 PF02542 YgbB family LFZ55_RS04810 PF01142 tRNA pseudouridine synthase D (TruD) LFZ55_RS04815 PF01975 Survival protein SurE LFZ55_RS04825 PF01551 Peptidase family M23 LFZ55_RS04825 PF01476 LysM domain LFZ55_RS04830 PF04539 Sigma-70 region 3 LFZ55_RS04830 PF04545 Sigma-70, region 4 LFZ55_RS04830 PF00140 Sigma-70 factor, region 1.2 LFZ55_RS04830 PF04542 Sigma-70 region 2 LFZ55_RS04840 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase LFZ55_RS04845 PF02441 Flavoprotein LFZ55_RS04850 PF01047 MarR family LFZ55_RS04855 PF08220 DeoR-like helix-turn-helix domain LFZ55_RS04855 PF00455 DeoR C terminal sensor domain LFZ55_RS04860 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase LFZ55_RS04860 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase LFZ55_RS04865 PF07005 Sugar-binding N-terminal domain LFZ55_RS04865 PF17042 Nucleotide-binding C-terminal domain LFZ55_RS04870 PF00596 Class II Aldolase and Adducin N-terminal domain LFZ55_RS04875 PF01261 Xylose isomerase-like TIM barrel LFZ55_RS04880 PF01370 NAD dependent epimerase/dehydratase family LFZ55_RS04885 PF02447 GntP family permease LFZ55_RS04890 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LFZ55_RS04890 PF03466 LysR substrate binding domain LFZ55_RS04895 PF07690 Major Facilitator Superfamily LFZ55_RS04905 PF05188 MutS domain II LFZ55_RS04905 PF00488 MutS domain V LFZ55_RS04905 PF05190 MutS family domain IV LFZ55_RS04905 PF05192 MutS domain III LFZ55_RS04905 PF01624 MutS domain I LFZ55_RS04910 PF04741 InvH outer membrane lipoprotein LFZ55_RS04915 PF12833 Helix-turn-helix domain LFZ55_RS04920 PF00263 Bacterial type II and III secretion system protein LFZ55_RS04920 PF03958 Bacterial type II/III secretion system short domain LFZ55_RS04925 PF07201 HrpJ-like domain LFZ55_RS04930 PF00771 FHIPEP family LFZ55_RS04935 PF03519 Invasion protein B family LFZ55_RS04940 PF18269 T3SS EscN ATPase C-terminal domain LFZ55_RS04940 PF02874 ATP synthase alpha/beta family, beta-barrel domain LFZ55_RS04940 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain LFZ55_RS04945 PF02090 Salmonella surface presentation of antigen gene type M protein LFZ55_RS04950 PF02510 Surface presentation of antigens protein LFZ55_RS04955 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term LFZ55_RS04960 PF00813 FliP family LFZ55_RS04965 PF01313 Bacterial export proteins, family 3 LFZ55_RS04970 PF01311 Bacterial export proteins, family 1 LFZ55_RS04975 PF01312 FlhB HrpN YscU SpaS Family LFZ55_RS04980 PF07720 Tetratricopeptide repeat LFZ55_RS04985 PF04888 Secretion system effector C (SseC) like family LFZ55_RS04985 PF16535 Type III cell invasion protein SipB LFZ55_RS04990 PF09599 Salmonella-Shigella invasin protein C (IpaC_SipC) LFZ55_RS04995 PF06511 Type III secretion systems tip complex components LFZ55_RS05000 PF09052 SipA N-terminal domain LFZ55_RS05005 PF00550 Phosphopantetheine attachment site LFZ55_RS05020 PF03545 Yersinia virulence determinant (YopE) LFZ55_RS05020 PF09119 SicP binding LFZ55_RS05020 PF00102 Protein-tyrosine phosphatase LFZ55_RS05025 PF01464 Transglycosylase SLT domain LFZ55_RS05030 PF00486 Transcriptional regulatory protein, C terminal LFZ55_RS05035 PF12833 Helix-turn-helix domain LFZ55_RS05040 PF09480 Type III secretion system protein PrgH-EprH (PrgH) LFZ55_RS05045 PF09392 Type III secretion needle MxiH, YscF, SsaG, EprI, PscF, EscF LFZ55_RS05055 PF01514 Secretory protein of YscJ/FliF family LFZ55_RS05060 PF09482 Bacterial type III secretion apparatus protein (OrgA_MxiK) LFZ55_RS05075 PF12833 Helix-turn-helix domain LFZ55_RS05085 PF03421 YopJ Serine/Threonine acetyltransferase LFZ55_RS05090 PF00950 ABC 3 transport family LFZ55_RS05095 PF00950 ABC 3 transport family LFZ55_RS05100 PF00005 ABC transporter LFZ55_RS05105 PF01297 Zinc-uptake complex component A periplasmic LFZ55_RS05110 PF11756 Nitrous oxide-stimulated promoter LFZ55_RS05115 PF02954 Bacterial regulatory protein, Fis family LFZ55_RS05115 PF00158 Sigma-54 interaction domain LFZ55_RS05115 PF01590 GAF domain LFZ55_RS05120 PF00586 AIR synthase related protein, N-terminal domain LFZ55_RS05120 PF02769 AIR synthase related protein, C-terminal domain LFZ55_RS05125 PF01924 Hydrogenase formation hypA family LFZ55_RS05130 PF01455 HupF/HypC family LFZ55_RS05135 PF02492 CobW/HypB/UreG, nucleotide-binding domain LFZ55_RS05140 PF01155 Hydrogenase/urease nickel incorporation, metallochaperone, hypA LFZ55_RS05145 PF11046 Transcriptional repressor of hyc and hyp operons LFZ55_RS05150 PF13247 4Fe-4S dicluster domain LFZ55_RS05155 PF00361 Proton-conducting membrane transporter LFZ55_RS05160 PF00146 NADH dehydrogenase LFZ55_RS05165 PF00374 Nickel-dependent hydrogenase LFZ55_RS05165 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit LFZ55_RS05165 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit LFZ55_RS05170 PF12838 4Fe-4S dicluster domain LFZ55_RS05175 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit LFZ55_RS05180 PF07450 Formate hydrogenlyase maturation protein HycH LFZ55_RS05185 PF01750 Hydrogenase maturation protease LFZ55_RS05190 PF12800 4Fe-4S binding domain LFZ55_RS05190 PF13247 4Fe-4S dicluster domain LFZ55_RS05195 PF00708 Acylphosphatase LFZ55_RS05195 PF07503 HypF finger LFZ55_RS05195 PF01300 Telomere recombination LFZ55_RS05195 PF17788 HypF Kae1-like domain LFZ55_RS05200 PF18113 Rubredoxin binding C-terminal domain LFZ55_RS05200 PF07992 Pyridine nucleotide-disulphide oxidoreductase LFZ55_RS05205 PF00753 Metallo-beta-lactamase superfamily LFZ55_RS05205 PF00301 Rubredoxin LFZ55_RS05205 PF00258 Flavodoxin LFZ55_RS05210 PF00158 Sigma-54 interaction domain LFZ55_RS05210 PF01590 GAF domain LFZ55_RS05215 PF00571 CBS domain LFZ55_RS05215 PF01380 SIS domain LFZ55_RS05220 PF08220 DeoR-like helix-turn-helix domain LFZ55_RS05220 PF00455 DeoR C terminal sensor domain LFZ55_RS05225 PF06923 Glucitol operon activator protein (GutM) LFZ55_RS05230 PF00106 short chain dehydrogenase LFZ55_RS05235 PF03829 PTS system glucitol/sorbitol-specific IIA component LFZ55_RS05240 PF03612 Sorbitol phosphotransferase enzyme II N-terminus LFZ55_RS05240 PF07663 Sorbitol phosphotransferase enzyme II C-terminus LFZ55_RS05245 PF03608 PTS system enzyme II sorbitol-specific factor LFZ55_RS05250 PF13406 Transglycosylase SLT domain LFZ55_RS05255 PF02464 Competence-damaged protein LFZ55_RS05260 PF00154 recA bacterial DNA recombination protein LFZ55_RS05265 PF02631 RecX family LFZ55_RS05275 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain LFZ55_RS05275 PF02272 DHHA1 domain LFZ55_RS05275 PF01411 tRNA synthetases class II (A) LFZ55_RS05280 PF02599 Global regulator protein family LFZ55_RS05315 PF13419 Haloacid dehalogenase-like hydrolase LFZ55_RS05320 PF09335 SNARE associated Golgi protein LFZ55_RS05325 PF04262 Glutamate-cysteine ligase LFZ55_RS05330 PF02664 S-Ribosylhomocysteinase (LuxS) LFZ55_RS05335 PF07690 Major Facilitator Superfamily LFZ55_RS05340 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion LFZ55_RS05340 PF00529 HlyD membrane-fusion protein of T1SS LFZ55_RS05345 PF01047 MarR family LFZ55_RS05350 PF07690 Major Facilitator Superfamily LFZ55_RS05355 PF04069 Substrate binding domain of ABC-type glycine betaine transport system LFZ55_RS05360 PF00528 Binding-protein-dependent transport system inner membrane component LFZ55_RS05365 PF00571 CBS domain LFZ55_RS05365 PF00005 ABC transporter LFZ55_RS05375 PF00268 Ribonucleotide reductase, small chain LFZ55_RS05380 PF08343 Ribonucleotide reductase N-terminal LFZ55_RS05380 PF02867 Ribonucleotide reductase, barrel domain LFZ55_RS05380 PF00317 Ribonucleotide reductase, all-alpha domain LFZ55_RS05385 PF07972 NrdI Flavodoxin like LFZ55_RS05390 PF00462 Glutaredoxin LFZ55_RS05400 PF02627 Carboxymuconolactone decarboxylase family LFZ55_RS05405 PF00155 Aminotransferase class I and II LFZ55_RS05405 PF00392 Bacterial regulatory proteins, gntR family LFZ55_RS05410 PF05957 Bacterial protein of unknown function (DUF883) LFZ55_RS05415 PF09400 Protein of unknown function (DUF2002) LFZ55_RS05420 PF06610 L-alanine exporter LFZ55_RS05425 PF00816 H-NS histone family LFZ55_RS05435 PF00581 Rhodanese-like domain LFZ55_RS05435 PF11127 Protein of unknown function (DUF2892) LFZ55_RS05440 PF01022 Bacterial regulatory protein, arsR family LFZ55_RS05445 PF01679 Proteolipid membrane potential modulator LFZ55_RS05450 PF01476 LysM domain LFZ55_RS05450 PF04972 BON domain LFZ55_RS05455 PF00392 Bacterial regulatory proteins, gntR family LFZ55_RS05455 PF07729 FCD domain LFZ55_RS05460 PF00324 Amino acid permease LFZ55_RS05465 PF00202 Aminotransferase class-III LFZ55_RS05470 PF00171 Aldehyde dehydrogenase family LFZ55_RS05475 PF01266 FAD dependent oxidoreductase LFZ55_RS05480 PF08943 CsiD LFZ55_RS05485 PF01970 Tripartite tricarboxylate transporter TctA family LFZ55_RS05500 PF00072 Response regulator receiver domain LFZ55_RS05500 PF00486 Transcriptional regulatory protein, C terminal LFZ55_RS05505 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LFZ55_RS05505 PF00512 His Kinase A (phospho-acceptor) domain LFZ55_RS05510 PF03824 High-affinity nickel-transport protein LFZ55_RS05530 PF04393 Protein of unknown function (DUF535) LFZ55_RS05540 PF00593 TonB dependent receptor LFZ55_RS05540 PF07715 TonB-dependent Receptor Plug Domain LFZ55_RS05545 PF00756 Putative esterase LFZ55_RS05555 PF00664 ABC transporter transmembrane region LFZ55_RS05555 PF00005 ABC transporter LFZ55_RS05560 PF06722 Protein of unknown function (DUF1205) LFZ55_RS05580 PF02796 Helix-turn-helix domain of resolvase LFZ55_RS05580 PF00239 Resolvase, N terminal domain LFZ55_RS05585 PF00669 Bacterial flagellin N-terminal helical region LFZ55_RS05585 PF00700 Bacterial flagellin C-terminal helical region LFZ55_RS05585 PF08884 Flagellin D3 domain LFZ55_RS05590 PF03614 Repressor of phase-1 flagellin LFZ55_RS05605 PF00419 Fimbrial protein LFZ55_RS05610 PF00419 Fimbrial protein LFZ55_RS05615 PF00577 Outer membrane usher protein LFZ55_RS05615 PF13954 PapC N-terminal domain LFZ55_RS05615 PF13953 PapC C-terminal domain LFZ55_RS05620 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain LFZ55_RS05620 PF02753 Pili assembly chaperone PapD, C-terminal domain LFZ55_RS05625 PF00419 Fimbrial protein LFZ55_RS05650 PF17345 Family of unknown function (DUF5375) LFZ55_RS05675 PF04606 Ogr/Delta-like zinc finger LFZ55_RS05695 PF13356 Arm DNA-binding domain LFZ55_RS05695 PF00589 Phage integrase family LFZ55_RS05705 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion LFZ55_RS05705 PF00529 HlyD membrane-fusion protein of T1SS LFZ55_RS05710 PF00664 ABC transporter transmembrane region LFZ55_RS05710 PF00005 ABC transporter LFZ55_RS05725 PF01668 SmpB protein LFZ55_RS05730 PF03364 Polyketide cyclase / dehydrase and lipid transport LFZ55_RS05735 PF03658 RnfH family Ubiquitin LFZ55_RS05740 PF04355 SmpA / OmlA family LFZ55_RS05745 PF02463 RecF/RecN/SMC N terminal domain LFZ55_RS05750 PF01513 ATP-NAD kinase LFZ55_RS05760 PF01025 GrpE LFZ55_RS05765 PF00571 CBS domain LFZ55_RS05765 PF03471 Transporter associated domain LFZ55_RS05765 PF01595 Cyclin M transmembrane N-terminal domain LFZ55_RS05770 PF01578 Cytochrome C assembly protein LFZ55_RS05780 PF02978 Signal peptide binding domain LFZ55_RS05780 PF00448 SRP54-type protein, GTPase domain LFZ55_RS05780 PF02881 SRP54-type protein, helical bundle domain LFZ55_RS05785 PF00886 Ribosomal protein S16 LFZ55_RS05790 PF01782 RimM N-terminal domain LFZ55_RS05790 PF05239 PRC-barrel domain LFZ55_RS05795 PF01746 tRNA (Guanine-1)-methyltransferase LFZ55_RS05800 PF01245 Ribosomal protein L19 LFZ55_RS05805 PF00990 Diguanylate cyclase, GGDEF domain LFZ55_RS05805 PF17152 Periplasmic sensor domain LFZ55_RS05810 PF13689 YfiR/HmsC-like LFZ55_RS05815 PF00793 DAHP synthetase I family LFZ55_RS05820 PF01817 Chorismate mutase type II LFZ55_RS05820 PF02153 Prephenate dehydrogenase LFZ55_RS05825 PF08450 SMP-30/Gluconolactonase/LRE-like region LFZ55_RS05830 PF00800 Prephenate dehydratase LFZ55_RS05830 PF01817 Chorismate mutase type II LFZ55_RS05835 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein LFZ55_RS05840 PF13525 Outer membrane lipoprotein LFZ55_RS05845 PF01479 S4 domain LFZ55_RS05845 PF00849 RNA pseudouridylate synthase LFZ55_RS05850 PF02578 Multi-copper polyphenol oxidoreductase laccase LFZ55_RS05855 PF17871 AAA lid domain LFZ55_RS05855 PF07724 AAA domain (Cdc48 subfamily) LFZ55_RS05855 PF10431 C-terminal, D2-small domain, of ClpB protein LFZ55_RS05855 PF02861 Clp amino terminal domain, pathogenicity island component LFZ55_RS05855 PF00004 ATPase family associated with various cellular activities (AAA) LFZ55_RS05890 PF10043 Predicted periplasmic lipoprotein (DUF2279) LFZ55_RS05895 PF13091 PLD-like domain LFZ55_RS05900 PF13607 Succinyl-CoA ligase like flavodoxin domain LFZ55_RS05900 PF13380 CoA binding domain LFZ55_RS05900 PF00583 Acetyltransferase (GNAT) family LFZ55_RS05905 PF03942 DTW domain LFZ55_RS05910 PF00085 Thioredoxin LFZ55_RS05920 PF08032 RNA 2'-O ribose methyltransferase substrate binding LFZ55_RS05920 PF00588 SpoU rRNA Methylase family LFZ55_RS05925 PF03167 Uracil DNA glycosylase superfamily LFZ55_RS05930 PF01228 Glycine radical LFZ55_RS05935 PF00270 DEAD/DEAH box helicase LFZ55_RS05935 PF00271 Helicase conserved C-terminal domain LFZ55_RS05940 PF05175 Methyltransferase small domain LFZ55_RS05945 PF02910 Fumarate reductase flavoprotein C-term LFZ55_RS05945 PF00890 FAD binding domain LFZ55_RS05955 PF04542 Sigma-70 region 2 LFZ55_RS05955 PF08281 Sigma-70, region 4 LFZ55_RS05960 PF03873 Anti sigma-E protein RseA, C-terminal domain LFZ55_RS05960 PF03872 Anti sigma-E protein RseA, N-terminal domain LFZ55_RS05965 PF03888 MucB/RseB N-terminal domain LFZ55_RS05965 PF17188 MucB/RseB C-terminal domain LFZ55_RS05980 PF06421 GTP-binding protein LepA C-terminus LFZ55_RS05980 PF03144 Elongation factor Tu domain 2 LFZ55_RS05980 PF00009 Elongation factor Tu GTP binding domain LFZ55_RS05980 PF00679 Elongation factor G C-terminus LFZ55_RS05985 PF10502 Signal peptidase, peptidase S26 LFZ55_RS05995 PF14622 Ribonuclease-III-like LFZ55_RS05995 PF00035 Double-stranded RNA binding motif LFZ55_RS06000 PF01926 50S ribosome-binding GTPase LFZ55_RS06000 PF07650 KH domain LFZ55_RS06005 PF02565 Recombination protein O C terminal LFZ55_RS06005 PF11967 Recombination protein O N terminal LFZ55_RS06010 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ LFZ55_RS06015 PF01648 4'-phosphopantetheinyl transferase superfamily LFZ55_RS06020 PF12838 4Fe-4S dicluster domain LFZ55_RS06025 PF01418 Helix-turn-helix domain, rpiR family LFZ55_RS06025 PF01380 SIS domain LFZ55_RS06030 PF01380 SIS domain LFZ55_RS06035 PF02378 Phosphotransferase system, EIIC LFZ55_RS06035 PF00367 phosphotransferase system, EIIB LFZ55_RS06045 PF14437 MafB19-like deaminase LFZ55_RS06050 PF01464 Transglycosylase SLT domain LFZ55_RS06050 PF00497 Bacterial extracellular solute-binding proteins, family 3 LFZ55_RS06060 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal LFZ55_RS06060 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain LFZ55_RS06060 PF02769 AIR synthase related protein, C-terminal domain LFZ55_RS06065 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LFZ55_RS06065 PF00512 His Kinase A (phospho-acceptor) domain LFZ55_RS06070 PF13942 YfhG lipoprotein LFZ55_RS06075 PF00158 Sigma-54 interaction domain LFZ55_RS06075 PF00072 Response regulator receiver domain LFZ55_RS06080 PF00543 Nitrogen regulatory protein P-II LFZ55_RS06085 PF00854 POT family LFZ55_RS06090 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain LFZ55_RS06090 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain LFZ55_RS06090 PF01276 Orn/Lys/Arg decarboxylase, major domain LFZ55_RS06095 PF13520 Amino acid permease LFZ55_RS06100 PF00486 Transcriptional regulatory protein, C terminal LFZ55_RS06100 PF18500 CadC C-terminal domain 1 LFZ55_RS06105 PF00042 Globin LFZ55_RS06105 PF00970 Oxidoreductase FAD-binding domain LFZ55_RS06105 PF00175 Oxidoreductase NAD-binding domain LFZ55_RS06110 PF00464 Serine hydroxymethyltransferase LFZ55_RS06115 PF12832 MFS_1 like family LFZ55_RS06120 PF00874 PRD domain LFZ55_RS06130 PF03824 High-affinity nickel-transport protein LFZ55_RS06135 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain LFZ55_RS06135 PF01077 Nitrite and sulphite reductase 4Fe-4S domain LFZ55_RS06135 PF13187 4Fe-4S dicluster domain LFZ55_RS06140 PF10418 Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B LFZ55_RS06140 PF00175 Oxidoreductase NAD-binding domain LFZ55_RS06145 PF17179 4Fe-4S dicluster domain LFZ55_RS06150 PF00459 Inositol monophosphatase family LFZ55_RS06155 PF00588 SpoU rRNA Methylase family LFZ55_RS06160 PF02082 Transcriptional regulator LFZ55_RS06165 PF00266 Aminotransferase class-V LFZ55_RS06170 PF01592 NifU-like N terminal domain LFZ55_RS06175 PF01521 Iron-sulphur cluster biosynthesis LFZ55_RS06180 PF07743 HSCB C-terminal oligomerisation domain LFZ55_RS06185 PF00012 Hsp70 protein LFZ55_RS06190 PF00111 2Fe-2S iron-sulfur cluster binding domain LFZ55_RS06195 PF04384 Iron-sulphur cluster assembly LFZ55_RS06200 PF12404 Peptidase LFZ55_RS06200 PF00883 Cytosol aminopeptidase family, catalytic domain LFZ55_RS06205 PF14581 SseB protein C-terminal domain LFZ55_RS06205 PF07179 SseB protein N-terminal domain LFZ55_RS06215 PF00581 Rhodanese-like domain LFZ55_RS06220 PF11974 Bacterial alpha-2-macroglobulin MG3 domain LFZ55_RS06220 PF07703 Alpha-2-macroglobulin bait region domain LFZ55_RS06220 PF17972 Bacterial Alpha-2-macroglobulin MG5 domain LFZ55_RS06220 PF17962 Bacterial macroglobulin domain 6 LFZ55_RS06220 PF01835 MG2 domain LFZ55_RS06220 PF07678 A-macroglobulin TED domain LFZ55_RS06220 PF00207 Alpha-2-macroglobulin family LFZ55_RS06220 PF17973 Bacterial Alpha-2-macroglobulin MG10 domain LFZ55_RS06220 PF17970 Bacterial Alpha-2-macroglobulin MG1 domain LFZ55_RS06225 PF06832 Penicillin-Binding Protein C-terminus Family LFZ55_RS06225 PF00912 Transglycosylase LFZ55_RS06225 PF00905 Penicillin binding protein transpeptidase domain LFZ55_RS06230 PF04879 Molybdopterin oxidoreductase Fe4S4 domain LFZ55_RS06230 PF00384 Molybdopterin oxidoreductase LFZ55_RS06230 PF01568 Molydopterin dinucleotide binding domain LFZ55_RS06235 PF12800 4Fe-4S binding domain LFZ55_RS06235 PF13247 4Fe-4S dicluster domain LFZ55_RS06250 PF00334 Nucleoside diphosphate kinase LFZ55_RS06255 PF04055 Radical SAM superfamily LFZ55_RS06265 PF13464 Domain of unknown function (DUF4115) LFZ55_RS06270 PF04551 GcpE protein LFZ55_RS06275 PF03129 Anticodon binding domain LFZ55_RS06275 PF13393 Histidyl-tRNA synthetase LFZ55_RS06280 PF09976 Tetratricopeptide repeat-like domain LFZ55_RS06285 PF13360 PQQ-like domain LFZ55_RS06290 PF01926 50S ribosome-binding GTPase LFZ55_RS06290 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal LFZ55_RS06295 PF07191 zinc-ribbons LFZ55_RS06305 PF16485 Protealysin propeptide LFZ55_RS06305 PF01447 Thermolysin metallopeptidase, catalytic domain LFZ55_RS06305 PF02868 Thermolysin metallopeptidase, alpha-helical domain LFZ55_RS06310 PF02601 Exonuclease VII, large subunit LFZ55_RS06310 PF13742 OB-fold nucleic acid binding domain LFZ55_RS06315 PF00571 CBS domain LFZ55_RS06315 PF00478 IMP dehydrogenase / GMP reductase domain LFZ55_RS06320 PF00958 GMP synthase C terminal domain LFZ55_RS06320 PF00117 Glutamine amidotransferase class-I LFZ55_RS06320 PF02540 NAD synthase LFZ55_RS06360 PF06630 Enterobacterial exodeoxyribonuclease VIII LFZ55_RS06360 PF12684 PDDEXK-like domain of unknown function (DUF3799) LFZ55_RS06385 PF17948 DnaT DNA-binding domain LFZ55_RS06545 PF01757 Acyltransferase family LFZ55_RS06560 PF00182 Chitinase class I LFZ55_RS06605 PF12684 PDDEXK-like domain of unknown function (DUF3799) LFZ55_RS06605 PF06630 Enterobacterial exodeoxyribonuclease VIII LFZ55_RS06670 PF01757 Acyltransferase family LFZ55_RS06685 PF00182 Chitinase class I LFZ55_RS06700 PF11119 Protein of unknown function (DUF2633) LFZ55_RS06710 PF00563 EAL domain LFZ55_RS06710 PF05231 MASE1 LFZ55_RS06715 PF02541 Ppx/GppA phosphatase family LFZ55_RS06720 PF13089 Polyphosphate kinase N-terminal domain LFZ55_RS06720 PF02503 Polyphosphate kinase middle domain LFZ55_RS06720 PF13090 Polyphosphate kinase C-terminal domain 2 LFZ55_RS06720 PF17941 Polyphosphate kinase C-terminal domain 1 LFZ55_RS06725 PF00551 Formyl transferase LFZ55_RS06730 PF00586 AIR synthase related protein, N-terminal domain LFZ55_RS06730 PF02769 AIR synthase related protein, C-terminal domain LFZ55_RS06740 PF00860 Permease family LFZ55_RS06745 PF00308 Bacterial dnaA protein LFZ55_RS06750 PF03960 ArsC family LFZ55_RS06755 PF01435 Peptidase family M48 LFZ55_RS06760 PF01594 AI-2E family transporter LFZ55_RS06765 PF17853 GGDEF-like domain LFZ55_RS06765 PF13556 PucR C-terminal helix-turn-helix domain LFZ55_RS06765 PF05651 Putative sugar diacid recognition LFZ55_RS06770 PF02447 GntP family permease LFZ55_RS06775 PF02595 Glycerate kinase family LFZ55_RS06780 PF00578 AhpC/TSA family LFZ55_RS06785 PF01842 ACT domain LFZ55_RS06790 PF00701 Dihydrodipicolinate synthetase family LFZ55_RS06795 PF06804 NlpB/DapX lipoprotein LFZ55_RS06800 PF01259 SAICAR synthetase LFZ55_RS06805 PF04228 Putative neutral zinc metallopeptidase LFZ55_RS06810 PF17176 tRNA-binding domain LFZ55_RS06810 PF13718 GNAT acetyltransferase 2 LFZ55_RS06810 PF05127 Helicase LFZ55_RS06810 PF08351 Domain of unknown function (DUF1726) LFZ55_RS06815 PF13980 Uncharacterised protein family (UPF0370) LFZ55_RS06820 PF01546 Peptidase family M20/M25/M40 LFZ55_RS06820 PF07687 Peptidase dimerisation domain LFZ55_RS06825 PF03960 ArsC family LFZ55_RS06830 PF00873 AcrB/AcrD/AcrF family LFZ55_RS06835 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term LFZ55_RS06835 PF07730 Histidine kinase LFZ55_RS06835 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LFZ55_RS06835 PF00672 HAMP domain LFZ55_RS06840 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster LFZ55_RS06840 PF07992 Pyridine nucleotide-disulphide oxidoreductase LFZ55_RS06840 PF13247 4Fe-4S dicluster domain LFZ55_RS06850 PF00144 Beta-lactamase LFZ55_RS06855 PF00293 NUDIX domain LFZ55_RS06860 PF06674 Protein of unknown function (DUF1176) LFZ55_RS06870 PF02780 Transketolase, C-terminal domain LFZ55_RS06870 PF00456 Transketolase, thiamine diphosphate binding domain LFZ55_RS06870 PF02779 Transketolase, pyrimidine binding domain LFZ55_RS06875 PF00923 Transaldolase/Fructose-6-phosphate aldolase LFZ55_RS06885 PF01515 Phosphate acetyl/butaryl transferase LFZ55_RS06885 PF00390 Malic enzyme, N-terminal domain LFZ55_RS06885 PF03949 Malic enzyme, NAD binding domain LFZ55_RS06895 PF04055 Radical SAM superfamily LFZ55_RS06895 PF13186 Iron-sulfur cluster-binding domain LFZ55_RS06900 PF00936 BMC domain LFZ55_RS06905 PF10662 Ethanolamine utilisation - propanediol utilisation LFZ55_RS06910 PF06249 Ethanolamine utilisation protein EutQ LFZ55_RS06915 PF01923 Cobalamin adenosyltransferase LFZ55_RS06920 PF01515 Phosphate acetyl/butaryl transferase LFZ55_RS06925 PF00936 BMC domain LFZ55_RS06930 PF03319 Ethanolamine utilisation protein EutN/carboxysome LFZ55_RS06935 PF00171 Aldehyde dehydrogenase family LFZ55_RS06945 PF00465 Iron-containing alcohol dehydrogenase LFZ55_RS06950 PF04346 Ethanolamine utilisation protein, EutH LFZ55_RS06955 PF06277 Ethanolamine utilisation protein EutA LFZ55_RS06960 PF06751 Ethanolamine ammonia lyase large subunit (EutB) LFZ55_RS06965 PF05985 Ethanolamine ammonia-lyase light chain (EutC) LFZ55_RS06970 PF00936 BMC domain LFZ55_RS06975 PF00936 BMC domain LFZ55_RS06975 PF16365 Ethanolamine utilization protein EutK C-terminus LFZ55_RS06980 PF12833 Helix-turn-helix domain LFZ55_RS06985 PF01218 Coproporphyrinogen III oxidase LFZ55_RS06990 PF01520 N-acetylmuramoyl-L-alanine amidase LFZ55_RS06995 PF00583 Acetyltransferase (GNAT) family LFZ55_RS07000 PF11143 Protein of unknown function (DUF2919) LFZ55_RS07005 PF06572 Protein of unknown function (DUF1131) LFZ55_RS07010 PF04261 Dyp-type peroxidase family LFZ55_RS07025 PF00528 Binding-protein-dependent transport system inner membrane component LFZ55_RS07030 PF00528 Binding-protein-dependent transport system inner membrane component LFZ55_RS07035 PF00005 ABC transporter LFZ55_RS07040 PF00291 Pyridoxal-phosphate dependent enzyme LFZ55_RS07045 PF00117 Glutamine amidotransferase class-I LFZ55_RS07050 PF00155 Aminotransferase class I and II LFZ55_RS07050 PF00392 Bacterial regulatory proteins, gntR family LFZ55_RS07055 PF08543 Phosphomethylpyrimidine kinase LFZ55_RS07065 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 LFZ55_RS07070 PF05524 PEP-utilising enzyme, N-terminal LFZ55_RS07070 PF02896 PEP-utilising enzyme, TIM barrel domain LFZ55_RS07070 PF00391 PEP-utilising enzyme, mobile domain LFZ55_RS07075 PF00381 PTS HPr component phosphorylation site LFZ55_RS07080 PF00291 Pyridoxal-phosphate dependent enzyme LFZ55_RS07090 PF04354 ZipA, C-terminal FtsZ-binding domain LFZ55_RS07095 PF12826 Helix-hairpin-helix motif LFZ55_RS07095 PF03120 NAD-dependent DNA ligase OB-fold domain LFZ55_RS07095 PF01653 NAD-dependent DNA ligase adenylation domain LFZ55_RS07095 PF00533 BRCA1 C Terminus (BRCT) domain LFZ55_RS07095 PF03119 NAD-dependent DNA ligase C4 zinc finger domain LFZ55_RS07100 PF12843 Putative quorum-sensing-regulated virulence factor LFZ55_RS07105 PF13593 SBF-like CPA transporter family (DUF4137) LFZ55_RS07110 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LFZ55_RS07110 PF03466 LysR substrate binding domain LFZ55_RS07135 PF00749 tRNA synthetases class I (E and Q), catalytic domain LFZ55_RS07140 PF07037 Putative transcription regulator (DUF1323) LFZ55_RS07145 PF07037 Putative transcription regulator (DUF1323) LFZ55_RS07165 PF00563 EAL domain LFZ55_RS07165 PF05231 MASE1 LFZ55_RS07170 PF07662 Na+ dependent nucleoside transporter C-terminus LFZ55_RS07170 PF07670 Nucleoside recognition LFZ55_RS07170 PF01773 Na+ dependent nucleoside transporter N-terminus LFZ55_RS07175 PF01566 Natural resistance-associated macrophage protein LFZ55_RS07180 PF10697 Protein of unknown function (DUF2502) LFZ55_RS07185 PF00248 Aldo/keto reductase family LFZ55_RS07190 PF00205 Thiamine pyrophosphate enzyme, central domain LFZ55_RS07190 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain LFZ55_RS07190 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain LFZ55_RS07195 PF00654 Voltage gated chloride channel LFZ55_RS07200 PF02685 Glucokinase LFZ55_RS07205 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit LFZ55_RS07210 PF02378 Phosphotransferase system, EIIC LFZ55_RS07215 PF01321 Creatinase/Prolidase N-terminal domain LFZ55_RS07215 PF00557 Metallopeptidase family M24 LFZ55_RS07220 PF05343 M42 glutamyl aminopeptidase LFZ55_RS07225 PF05524 PEP-utilising enzyme, N-terminal LFZ55_RS07225 PF00391 PEP-utilising enzyme, mobile domain LFZ55_RS07225 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 LFZ55_RS07225 PF00381 PTS HPr component phosphorylation site LFZ55_RS07225 PF02896 PEP-utilising enzyme, TIM barrel domain LFZ55_RS07230 PF12833 Helix-turn-helix domain LFZ55_RS07240 PF00155 Aminotransferase class I and II LFZ55_RS07250 PF03279 Bacterial lipid A biosynthesis acyltransferase LFZ55_RS07255 PF10810 Protein of unknown function (DUF2545) LFZ55_RS07260 PF07690 Major Facilitator Superfamily LFZ55_RS07275 PF00672 HAMP domain LFZ55_RS07275 PF00512 His Kinase A (phospho-acceptor) domain LFZ55_RS07275 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LFZ55_RS07280 PF00072 Response regulator receiver domain LFZ55_RS07280 PF14532 Sigma-54 interaction domain LFZ55_RS07280 PF02954 Bacterial regulatory protein, Fis family LFZ55_RS07285 PF01278 Omptin family LFZ55_RS07295 PF01226 Formate/nitrite transporter LFZ55_RS07300 PF04333 MlaA lipoprotein LFZ55_RS07305 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) LFZ55_RS07310 PF04175 Protein of unknown function (DUF406) LFZ55_RS07315 PF00108 Thiolase, N-terminal domain LFZ55_RS07315 PF02803 Thiolase, C-terminal domain LFZ55_RS07320 PF00378 Enoyl-CoA hydratase/isomerase LFZ55_RS07320 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain LFZ55_RS07320 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain LFZ55_RS07325 PF00300 Histidine phosphatase superfamily (branch 1) LFZ55_RS07330 PF01713 Smr domain LFZ55_RS07335 PF05175 Methyltransferase small domain LFZ55_RS07340 PF01264 Chorismate synthase LFZ55_RS07345 PF03411 Penicillin-insensitive murein endopeptidase LFZ55_RS07350 PF01925 Sulfite exporter TauE/SafE LFZ55_RS07355 PF04315 Elongation factor P hydroxylase LFZ55_RS07360 PF08891 YfcL protein LFZ55_RS07365 PF05430 S-adenosyl-L-methionine-dependent methyltransferase LFZ55_RS07365 PF01266 FAD dependent oxidoreductase LFZ55_RS07370 PF00109 Beta-ketoacyl synthase, N-terminal domain LFZ55_RS07370 PF02801 Beta-ketoacyl synthase, C-terminal domain LFZ55_RS07385 PF13693 Winged helix-turn-helix DNA-binding LFZ55_RS07395 PF07690 Major Facilitator Superfamily LFZ55_RS07405 PF11890 Domain of unknown function (DUF3410) LFZ55_RS07405 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain LFZ55_RS07405 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain LFZ55_RS07410 PF02774 Semialdehyde dehydrogenase, dimerisation domain LFZ55_RS07410 PF01118 Semialdehyde dehydrogenase, NAD binding domain LFZ55_RS07415 PF01416 tRNA pseudouridine synthase LFZ55_RS07420 PF09335 SNARE associated Golgi protein LFZ55_RS07425 PF17848 Acetyl-coA carboxylase zinc finger domain LFZ55_RS07425 PF01039 Carboxyl transferase domain LFZ55_RS07430 PF02875 Mur ligase family, glutamate ligase domain LFZ55_RS07430 PF08245 Mur ligase middle domain LFZ55_RS07435 PF05036 Sporulation related domain LFZ55_RS07440 PF02674 Colicin V production protein LFZ55_RS07445 PF00156 Phosphoribosyl transferase domain LFZ55_RS07450 PF00158 Sigma-54 interaction domain LFZ55_RS07450 PF13426 PAS domain LFZ55_RS07450 PF02954 Bacterial regulatory protein, Fis family LFZ55_RS07455 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain LFZ55_RS07455 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain LFZ55_RS07460 PF13520 Amino acid permease LFZ55_RS07465 PF01168 Alanine racemase, N-terminal domain LFZ55_RS07470 PF00324 Amino acid permease LFZ55_RS07475 PF02441 Flavoprotein LFZ55_RS07485 PF00497 Bacterial extracellular solute-binding proteins, family 3 LFZ55_RS07490 PF00497 Bacterial extracellular solute-binding proteins, family 3 LFZ55_RS07495 PF00528 Binding-protein-dependent transport system inner membrane component LFZ55_RS07500 PF00528 Binding-protein-dependent transport system inner membrane component LFZ55_RS07505 PF00005 ABC transporter LFZ55_RS07510 PF01370 NAD dependent epimerase/dehydratase family LFZ55_RS07510 PF08338 Domain of unknown function (DUF1731) LFZ55_RS07515 PF00043 Glutathione S-transferase, C-terminal domain LFZ55_RS07515 PF02798 Glutathione S-transferase, N-terminal domain LFZ55_RS07520 PF02798 Glutathione S-transferase, N-terminal domain LFZ55_RS07520 PF14834 Glutathione S-transferase, C-terminal domain LFZ55_RS07525 PF12850 Calcineurin-like phosphoesterase superfamily domain LFZ55_RS07530 PF00293 NUDIX domain LFZ55_RS07535 PF00356 Bacterial regulatory proteins, lacI family LFZ55_RS07545 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 LFZ55_RS07555 PF03611 PTS system sugar-specific permease component LFZ55_RS07560 PF00456 Transketolase, thiamine diphosphate binding domain LFZ55_RS07565 PF02780 Transketolase, C-terminal domain LFZ55_RS07565 PF02779 Transketolase, pyrimidine binding domain LFZ55_RS07565 PF13292 1-deoxy-D-xylulose-5-phosphate synthase LFZ55_RS07570 PF03606 C4-dicarboxylate anaerobic carrier LFZ55_RS07575 PF01515 Phosphate acetyl/butaryl transferase LFZ55_RS07575 PF07085 DRTGG domain LFZ55_RS07580 PF00871 Acetokinase family LFZ55_RS07585 PF04217 Protein of unknown function, DUF412 LFZ55_RS07590 PF03887 YfbU domain LFZ55_RS07595 PF13419 Haloacid dehalogenase-like hydrolase LFZ55_RS07600 PF02080 TrkA-C domain LFZ55_RS07600 PF03600 Citrate transporter LFZ55_RS07610 PF00155 Aminotransferase class I and II LFZ55_RS07620 PF03466 LysR substrate binding domain LFZ55_RS07620 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LFZ55_RS07630 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 LFZ55_RS07635 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit LFZ55_RS07640 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit LFZ55_RS07640 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit LFZ55_RS07650 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit LFZ55_RS07650 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region LFZ55_RS07650 PF10531 SLBB domain LFZ55_RS07655 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region LFZ55_RS07655 PF01568 Molydopterin dinucleotide binding domain LFZ55_RS07655 PF04879 Molybdopterin oxidoreductase Fe4S4 domain LFZ55_RS07655 PF00384 Molybdopterin oxidoreductase LFZ55_RS07660 PF00146 NADH dehydrogenase LFZ55_RS07665 PF12838 4Fe-4S dicluster domain LFZ55_RS07670 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 LFZ55_RS07675 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L LFZ55_RS07680 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus LFZ55_RS07680 PF00361 Proton-conducting membrane transporter LFZ55_RS07685 PF00361 Proton-conducting membrane transporter LFZ55_RS07690 PF00361 Proton-conducting membrane transporter LFZ55_RS07695 PF01584 CheW-like domain LFZ55_RS07695 PF00072 Response regulator receiver domain LFZ55_RS07700 PF12706 Beta-lactamase superfamily domain LFZ55_RS07705 PF13673 Acetyltransferase (GNAT) domain LFZ55_RS07710 PF05957 Bacterial protein of unknown function (DUF883) LFZ55_RS07715 PF00425 chorismate binding enzyme LFZ55_RS07720 PF16582 Middle domain of thiamine pyrophosphate LFZ55_RS07720 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain LFZ55_RS07720 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain LFZ55_RS07725 PF12697 Alpha/beta hydrolase family LFZ55_RS07730 PF00378 Enoyl-CoA hydratase/isomerase LFZ55_RS07735 PF13378 Enolase C-terminal domain-like LFZ55_RS07740 PF13193 AMP-binding enzyme C-terminal domain LFZ55_RS07740 PF00501 AMP-binding enzyme LFZ55_RS07755 PF00892 EamA-like transporter family LFZ55_RS07760 PF02366 Dolichyl-phosphate-mannose-protein mannosyltransferase LFZ55_RS07765 PF01522 Polysaccharide deacetylase LFZ55_RS07770 PF00551 Formyl transferase LFZ55_RS07770 PF02911 Formyl transferase, C-terminal domain LFZ55_RS07770 PF01370 NAD dependent epimerase/dehydratase family LFZ55_RS07775 PF00535 Glycosyl transferase family 2 LFZ55_RS07780 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family LFZ55_RS07785 PF00300 Histidine phosphatase superfamily (branch 1) LFZ55_RS07790 PF00293 NUDIX domain LFZ55_RS07795 PF07437 YfaZ precursor LFZ55_RS07800 PF00994 Probable molybdopterin binding domain LFZ55_RS07805 PF04754 Putative transposase, YhgA-like LFZ55_RS07810 PF13183 4Fe-4S dicluster domain LFZ55_RS07810 PF02754 Cysteine-rich domain LFZ55_RS07815 PF00890 FAD binding domain LFZ55_RS07820 PF01266 FAD dependent oxidoreductase LFZ55_RS07820 PF04324 BFD-like [2Fe-2S] binding domain LFZ55_RS07825 PF07690 Major Facilitator Superfamily LFZ55_RS07830 PF03009 Glycerophosphoryl diester phosphodiesterase family LFZ55_RS07835 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LFZ55_RS07835 PF03466 LysR substrate binding domain LFZ55_RS07840 PF07690 Major Facilitator Superfamily LFZ55_RS07845 PF00111 2Fe-2S iron-sulfur cluster binding domain LFZ55_RS07850 PF00268 Ribonucleotide reductase, small chain LFZ55_RS07855 PF02867 Ribonucleotide reductase, barrel domain LFZ55_RS07855 PF00317 Ribonucleotide reductase, all-alpha domain LFZ55_RS07855 PF03477 ATP cone domain LFZ55_RS07865 PF03989 DNA gyrase C-terminal domain, beta-propeller LFZ55_RS07865 PF00521 DNA gyrase/topoisomerase IV, subunit A LFZ55_RS07870 PF00072 Response regulator receiver domain LFZ55_RS07870 PF09456 RcsC Alpha-Beta-Loop (ABL) LFZ55_RS07870 PF00512 His Kinase A (phospho-acceptor) domain LFZ55_RS07870 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LFZ55_RS07875 PF00072 Response regulator receiver domain LFZ55_RS07875 PF00196 Bacterial regulatory proteins, luxR family LFZ55_RS07880 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LFZ55_RS07880 PF16359 RcsD-ABL domain LFZ55_RS07880 PF01627 Hpt domain LFZ55_RS07890 PF00267 Gram-negative porin LFZ55_RS07895 PF02424 ApbE family LFZ55_RS07900 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain LFZ55_RS07900 PF12833 Helix-turn-helix domain LFZ55_RS07900 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain LFZ55_RS07900 PF02805 Metal binding domain of Ada LFZ55_RS07905 PF13532 2OG-Fe(II) oxygenase superfamily LFZ55_RS07910 PF00005 ABC transporter LFZ55_RS07915 PF03974 Ecotin LFZ55_RS07920 PF00037 4Fe-4S binding domain LFZ55_RS07920 PF12800 4Fe-4S binding domain LFZ55_RS07920 PF13187 4Fe-4S dicluster domain LFZ55_RS07925 PF03927 NapD protein LFZ55_RS07930 PF04879 Molybdopterin oxidoreductase Fe4S4 domain LFZ55_RS07930 PF00384 Molybdopterin oxidoreductase LFZ55_RS07930 PF01568 Molydopterin dinucleotide binding domain LFZ55_RS07935 PF12838 4Fe-4S dicluster domain LFZ55_RS07935 PF12800 4Fe-4S binding domain LFZ55_RS07940 PF12801 4Fe-4S binding domain LFZ55_RS07940 PF13237 4Fe-4S dicluster domain LFZ55_RS07945 PF03892 Nitrate reductase cytochrome c-type subunit (NapB) LFZ55_RS07950 PF03264 NapC/NirT cytochrome c family, N-terminal region LFZ55_RS07955 PF00005 ABC transporter LFZ55_RS07960 PF03379 CcmB protein LFZ55_RS07965 PF01578 Cytochrome C assembly protein LFZ55_RS07970 PF04995 Heme exporter protein D (CcmD) LFZ55_RS07975 PF03100 CcmE LFZ55_RS07980 PF01578 Cytochrome C assembly protein LFZ55_RS07980 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal LFZ55_RS07985 PF08534 Redoxin LFZ55_RS07990 PF03918 Cytochrome C biogenesis protein LFZ55_RS07995 PF00196 Bacterial regulatory proteins, luxR family LFZ55_RS07995 PF00072 Response regulator receiver domain LFZ55_RS08020 PF14431 YwqJ-like deaminase LFZ55_RS08020 PF18807 Tripartite Tc toxins repeat LFZ55_RS08025 PF18807 Tripartite Tc toxins repeat LFZ55_RS08025 PF05785 Rho-activating domain of cytotoxic necrotizing factor LFZ55_RS08030 PF12255 Insecticide toxin TcdB middle/C-terminal region LFZ55_RS08030 PF03534 Salmonella virulence plasmid 65kDa B protein LFZ55_RS08030 PF12256 Insecticide toxin TcdB middle/N-terminal region LFZ55_RS08035 PF18276 Tc toxin complex TcA C-terminal TcB-binding domain LFZ55_RS08035 PF18413 Neuraminidase-like domain LFZ55_RS08045 PF03538 Salmonella virulence plasmid 28.1kDa A protein LFZ55_RS08050 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LFZ55_RS08060 PF13859 BNR repeat-like domain LFZ55_RS08065 PF07715 TonB-dependent Receptor Plug Domain LFZ55_RS08065 PF00593 TonB dependent receptor LFZ55_RS08085 PF11893 Domain of unknown function (DUF3413) LFZ55_RS08085 PF00884 Sulfatase LFZ55_RS08090 PF07208 Protein of unknown function (DUF1414) LFZ55_RS08095 PF04245 37-kD nucleoid-associated bacterial protein LFZ55_RS08100 PF01386 Ribosomal L25p family LFZ55_RS08105 PF04851 Type III restriction enzyme, res subunit LFZ55_RS08105 PF00271 Helicase conserved C-terminal domain LFZ55_RS08110 PF00849 RNA pseudouridylate synthase LFZ55_RS08110 PF01479 S4 domain LFZ55_RS08115 PF07690 Major Facilitator Superfamily LFZ55_RS08125 PF13989 YejG-like protein LFZ55_RS08130 PF00005 ABC transporter LFZ55_RS08130 PF08352 Oligopeptide/dipeptide transporter, C-terminal region LFZ55_RS08135 PF12911 N-terminal TM domain of oligopeptide transport permease C LFZ55_RS08135 PF00528 Binding-protein-dependent transport system inner membrane component LFZ55_RS08140 PF00528 Binding-protein-dependent transport system inner membrane component LFZ55_RS08145 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle LFZ55_RS08150 PF00563 EAL domain LFZ55_RS08150 PF12792 CSS motif domain associated with EAL LFZ55_RS08160 PF00877 NlpC/P60 family LFZ55_RS08170 PF01569 PAP2 superfamily LFZ55_RS08175 PF07683 Cobalamin synthesis protein cobW C-terminal domain LFZ55_RS08175 PF02492 CobW/HypB/UreG, nucleotide-binding domain LFZ55_RS08180 PF00392 Bacterial regulatory proteins, gntR family LFZ55_RS08180 PF00155 Aminotransferase class I and II LFZ55_RS08185 PF03264 NapC/NirT cytochrome c family, N-terminal region LFZ55_RS08190 PF01568 Molydopterin dinucleotide binding domain LFZ55_RS08190 PF18364 Molybdopterin oxidoreductase N-terminal domain LFZ55_RS08190 PF00384 Molybdopterin oxidoreductase LFZ55_RS08195 PF02613 Nitrate reductase delta subunit LFZ55_RS08200 PF01132 Elongation factor P (EF-P) OB domain LFZ55_RS08200 PF08207 Elongation factor P (EF-P) KOW-like domain LFZ55_RS08200 PF09285 Elongation factor P, C-terminal LFZ55_RS08205 PF03692 Putative zinc- or iron-chelating domain LFZ55_RS08220 PF07690 Major Facilitator Superfamily LFZ55_RS08225 PF00381 PTS HPr component phosphorylation site LFZ55_RS08225 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 LFZ55_RS08230 PF00294 pfkB family carbohydrate kinase LFZ55_RS08235 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit LFZ55_RS08235 PF02378 Phosphotransferase system, EIIC LFZ55_RS08240 PF01261 Xylose isomerase-like TIM barrel LFZ55_RS08245 PF03601 Conserved hypothetical protein 698 LFZ55_RS08250 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LFZ55_RS08250 PF03466 LysR substrate binding domain LFZ55_RS08255 PF00324 Amino acid permease LFZ55_RS08265 PF07715 TonB-dependent Receptor Plug Domain LFZ55_RS08265 PF00593 TonB dependent receptor LFZ55_RS08270 PF07690 Major Facilitator Superfamily LFZ55_RS08280 PF03313 Serine dehydratase alpha chain LFZ55_RS08280 PF03315 Serine dehydratase beta chain LFZ55_RS08290 PF00756 Putative esterase LFZ55_RS08300 PF01227 GTP cyclohydrolase I LFZ55_RS08305 PF04235 Protein of unknown function (DUF418) LFZ55_RS08315 PF00356 Bacterial regulatory proteins, lacI family LFZ55_RS08320 PF13407 Periplasmic binding protein domain LFZ55_RS08325 PF00005 ABC transporter LFZ55_RS08330 PF02653 Branched-chain amino acid transport system / permease component LFZ55_RS08335 PF01180 Dihydroorotate dehydrogenase LFZ55_RS08340 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster LFZ55_RS08340 PF07992 Pyridine nucleotide-disulphide oxidoreductase LFZ55_RS08345 PF10808 Protein of unknown function (DUF2542) LFZ55_RS08350 PF02698 DUF218 domain LFZ55_RS08355 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region LFZ55_RS08355 PF08211 Cytidine and deoxycytidylate deaminase zinc-binding region LFZ55_RS08360 PF04172 LrgB-like family LFZ55_RS08365 PF03788 LrgA family LFZ55_RS08375 PF07883 Cupin domain LFZ55_RS08380 PF01557 Fumarylacetoacetate (FAA) hydrolase family LFZ55_RS08385 PF14497 Glutathione S-transferase, C-terminal domain LFZ55_RS08385 PF02798 Glutathione S-transferase, N-terminal domain LFZ55_RS08390 PF01494 FAD binding domain LFZ55_RS08395 PF01207 Dihydrouridine synthase (Dus) LFZ55_RS08405 PF02321 Outer membrane efflux protein LFZ55_RS08415 PF09335 SNARE associated Golgi protein LFZ55_RS08420 PF04893 Yip1 domain LFZ55_RS08430 PF00768 D-alanyl-D-alanine carboxypeptidase LFZ55_RS08435 PF09330 D-lactate dehydrogenase, membrane binding LFZ55_RS08435 PF01565 FAD binding domain LFZ55_RS08440 PF01915 Glycosyl hydrolase family 3 C-terminal domain LFZ55_RS08440 PF14310 Fibronectin type III-like domain LFZ55_RS08440 PF00933 Glycosyl hydrolase family 3 N terminal domain LFZ55_RS08445 PF04069 Substrate binding domain of ABC-type glycine betaine transport system LFZ55_RS08450 PF00528 Binding-protein-dependent transport system inner membrane component LFZ55_RS08455 PF00005 ABC transporter LFZ55_RS08460 PF00528 Binding-protein-dependent transport system inner membrane component LFZ55_RS08470 PF13411 MerR HTH family regulatory protein LFZ55_RS08475 PF06580 Histidine kinase LFZ55_RS08475 PF07694 5TMR of 5TMR-LYT LFZ55_RS08480 PF00072 Response regulator receiver domain LFZ55_RS08480 PF04397 LytTr DNA-binding domain LFZ55_RS08485 PF07308 Protein of unknown function (DUF1456) LFZ55_RS08490 PF06998 Protein of unknown function (DUF1307) LFZ55_RS08495 PF09334 tRNA synthetases class I (M) LFZ55_RS08495 PF01588 Putative tRNA binding domain LFZ55_RS08500 PF10609 NUBPL iron-transfer P-loop NTPase LFZ55_RS08515 PF02753 Pili assembly chaperone PapD, C-terminal domain LFZ55_RS08515 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain LFZ55_RS08520 PF13953 PapC C-terminal domain LFZ55_RS08520 PF13954 PapC N-terminal domain LFZ55_RS08520 PF00577 Outer membrane usher protein LFZ55_RS08530 PF11776 Nickel/cobalt transporter regulator LFZ55_RS08535 PF02110 Hydroxyethylthiazole kinase family LFZ55_RS08540 PF08543 Phosphomethylpyrimidine kinase LFZ55_RS08545 PF07702 UTRA domain LFZ55_RS08545 PF00392 Bacterial regulatory proteins, gntR family LFZ55_RS08550 PF00294 pfkB family carbohydrate kinase LFZ55_RS08555 PF03747 ADP-ribosylglycohydrolase LFZ55_RS08560 PF03825 Nucleoside H+ symporter LFZ55_RS08565 PF01791 DeoC/LacD family aldolase LFZ55_RS08570 PF00781 Diacylglycerol kinase catalytic domain LFZ55_RS08580 PF05932 Tir chaperone protein (CesT) family LFZ55_RS08590 PF01136 Peptidase family U32 LFZ55_RS08590 PF16325 Peptidase family U32 C-terminal domain LFZ55_RS08595 PF00072 Response regulator receiver domain LFZ55_RS08595 PF00486 Transcriptional regulatory protein, C terminal LFZ55_RS08600 PF00672 HAMP domain LFZ55_RS08600 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LFZ55_RS08600 PF00512 His Kinase A (phospho-acceptor) domain LFZ55_RS08605 PF07690 Major Facilitator Superfamily LFZ55_RS08610 PF00873 AcrB/AcrD/AcrF family LFZ55_RS08615 PF00873 AcrB/AcrD/AcrF family LFZ55_RS08620 PF13533 Biotin-lipoyl like LFZ55_RS08625 PF00012 Hsp70 protein LFZ55_RS08635 PF00730 HhH-GPD superfamily base excision DNA repair protein LFZ55_RS08635 PF06029 AlkA N-terminal domain LFZ55_RS08640 PF00990 Diguanylate cyclase, GGDEF domain LFZ55_RS08640 PF08448 PAS fold LFZ55_RS08640 PF13426 PAS domain LFZ55_RS08640 PF05231 MASE1 LFZ55_RS08640 PF00563 EAL domain LFZ55_RS08640 PF08447 PAS fold LFZ55_RS08650 PF00485 Phosphoribulokinase / Uridine kinase family LFZ55_RS08655 PF00692 dUTPase LFZ55_RS08660 PF05170 AsmA family LFZ55_RS08665 PF00571 CBS domain LFZ55_RS08665 PF03471 Transporter associated domain LFZ55_RS08665 PF03741 Integral membrane protein TerC family LFZ55_RS08675 PF18412 Outer-membrane lipoprotein Wza C-terminal domain LFZ55_RS08675 PF10531 SLBB domain LFZ55_RS08675 PF02563 Polysaccharide biosynthesis/export protein LFZ55_RS08680 PF01451 Low molecular weight phosphotyrosine protein phosphatase LFZ55_RS08685 PF13807 G-rich domain on putative tyrosine kinase LFZ55_RS08685 PF02706 Chain length determinant protein LFZ55_RS08685 PF13614 AAA domain LFZ55_RS08690 PF00535 Glycosyl transferase family 2 LFZ55_RS08695 PF00132 Bacterial transferase hexapeptide (six repeats) LFZ55_RS08700 PF00534 Glycosyl transferases group 1 LFZ55_RS08700 PF13439 Glycosyltransferase Family 4 LFZ55_RS08710 PF00535 Glycosyl transferase family 2 LFZ55_RS08715 PF00132 Bacterial transferase hexapeptide (six repeats) LFZ55_RS08720 PF16363 GDP-mannose 4,6 dehydratase LFZ55_RS08725 PF01370 NAD dependent epimerase/dehydratase family LFZ55_RS08730 PF00293 NUDIX domain LFZ55_RS08735 PF00534 Glycosyl transferases group 1 LFZ55_RS08735 PF13579 Glycosyl transferase 4-like domain LFZ55_RS08740 PF01050 Mannose-6-phosphate isomerase LFZ55_RS08740 PF00483 Nucleotidyl transferase LFZ55_RS08745 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I LFZ55_RS08745 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain LFZ55_RS08745 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II LFZ55_RS08745 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III LFZ55_RS08750 PF02397 Bacterial sugar transferase LFZ55_RS08760 PF04230 Polysaccharide pyruvyl transferase LFZ55_RS08765 PF13439 Glycosyltransferase Family 4 LFZ55_RS08765 PF00534 Glycosyl transferases group 1 LFZ55_RS08775 PF00483 Nucleotidyl transferase LFZ55_RS08785 PF13439 Glycosyltransferase Family 4 LFZ55_RS08790 PF00483 Nucleotidyl transferase LFZ55_RS08790 PF01050 Mannose-6-phosphate isomerase LFZ55_RS08795 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III LFZ55_RS08795 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II LFZ55_RS08795 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I LFZ55_RS08795 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain LFZ55_RS08835 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain LFZ55_RS08835 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase LFZ55_RS08845 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain LFZ55_RS08845 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain LFZ55_RS08850 PF02706 Chain length determinant protein LFZ55_RS08855 PF01502 Phosphoribosyl-AMP cyclohydrolase LFZ55_RS08855 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase LFZ55_RS08860 PF00977 Histidine biosynthesis protein LFZ55_RS08865 PF00977 Histidine biosynthesis protein LFZ55_RS08870 PF00117 Glutamine amidotransferase class-I LFZ55_RS08875 PF00475 Imidazoleglycerol-phosphate dehydratase LFZ55_RS08880 PF00155 Aminotransferase class I and II LFZ55_RS08885 PF00815 Histidinol dehydrogenase LFZ55_RS08890 PF01634 ATP phosphoribosyltransferase LFZ55_RS08890 PF08029 HisG, C-terminal domain LFZ55_RS08900 PF01370 NAD dependent epimerase/dehydratase family LFZ55_RS08905 PF03466 LysR substrate binding domain LFZ55_RS08905 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LFZ55_RS08910 PF13520 Amino acid permease LFZ55_RS08915 PF08411 Exonuclease C-terminal LFZ55_RS08915 PF00929 Exonuclease LFZ55_RS08920 PF01568 Molydopterin dinucleotide binding domain LFZ55_RS08920 PF04879 Molybdopterin oxidoreductase Fe4S4 domain LFZ55_RS08920 PF00384 Molybdopterin oxidoreductase LFZ55_RS08925 PF13247 4Fe-4S dicluster domain LFZ55_RS08925 PF12800 4Fe-4S binding domain LFZ55_RS08930 PF01292 Prokaryotic cytochrome b561 LFZ55_RS08935 PF07943 Penicillin-binding protein 5, C-terminal domain LFZ55_RS08935 PF00768 D-alanyl-D-alanine carboxypeptidase LFZ55_RS08940 PF06445 GyrI-like small molecule binding domain LFZ55_RS08945 PF04632 Fusaric acid resistance protein family LFZ55_RS08950 PF04363 Protein of unknown function (DUF496) LFZ55_RS08955 PF00288 GHMP kinases N terminal domain LFZ55_RS08960 PF00871 Acetokinase family LFZ55_RS08965 PF10662 Ethanolamine utilisation - propanediol utilisation LFZ55_RS08970 PF00936 BMC domain LFZ55_RS08975 PF00936 BMC domain LFZ55_RS08980 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit LFZ55_RS08980 PF13237 4Fe-4S dicluster domain LFZ55_RS08980 PF13375 RnfC Barrel sandwich hybrid domain LFZ55_RS08980 PF10531 SLBB domain LFZ55_RS08985 PF00465 Iron-containing alcohol dehydrogenase LFZ55_RS08985 PF00171 Aldehyde dehydrogenase family LFZ55_RS08990 PF00171 Aldehyde dehydrogenase family LFZ55_RS08995 PF01923 Cobalamin adenosyltransferase LFZ55_RS09000 PF03319 Ethanolamine utilisation protein EutN/carboxysome LFZ55_RS09010 PF06130 Phosphate propanoyltransferase LFZ55_RS09020 PF00936 BMC domain LFZ55_RS09030 PF18427 DD-reactivating factor swiveling domain LFZ55_RS09030 PF08841 Diol dehydratase reactivase ATPase-like domain LFZ55_RS09035 PF02287 Dehydratase small subunit LFZ55_RS09040 PF02288 Dehydratase medium subunit LFZ55_RS09045 PF02286 Dehydratase large subunit LFZ55_RS09050 PF00936 BMC domain LFZ55_RS09055 PF00936 BMC domain LFZ55_RS09060 PF00230 Major intrinsic protein LFZ55_RS09065 PF10114 Sensory domain found in PocR LFZ55_RS09065 PF12833 Helix-turn-helix domain LFZ55_RS09070 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain LFZ55_RS09070 PF07685 CobB/CobQ-like glutamine amidotransferase domain LFZ55_RS09075 PF03186 CobD/Cbib protein LFZ55_RS09080 PF02570 Precorrin-8X methylmutase LFZ55_RS09085 PF01888 CbiD LFZ55_RS09090 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases LFZ55_RS09095 PF05175 Methyltransferase small domain LFZ55_RS09100 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases LFZ55_RS09105 PF11760 Cobalamin synthesis G N-terminal LFZ55_RS09105 PF01890 Cobalamin synthesis G C-terminus LFZ55_RS09105 PF11761 Cobalamin biosynthesis central region LFZ55_RS09110 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases LFZ55_RS09115 PF02571 Precorrin-6x reductase CbiJ/CobK LFZ55_RS09120 PF06180 Cobalt chelatase (CbiK) LFZ55_RS09125 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases LFZ55_RS09130 PF01891 Cobalt uptake substrate-specific transmembrane region LFZ55_RS09135 PF02553 Cobalt transport protein component CbiN LFZ55_RS09140 PF02361 Cobalt transport protein LFZ55_RS09145 PF00005 ABC transporter LFZ55_RS09150 PF07685 CobB/CobQ-like glutamine amidotransferase domain LFZ55_RS09155 PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase LFZ55_RS09160 PF02654 Cobalamin-5-phosphate synthase LFZ55_RS09165 PF02277 Phosphoribosyltransferase LFZ55_RS09170 PF03734 L,D-transpeptidase catalytic domain LFZ55_RS09170 PF17969 L,D-transpeptidase C-terminal domain LFZ55_RS09220 PF01527 Transposase LFZ55_RS09310 PF03466 LysR substrate binding domain LFZ55_RS09310 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LFZ55_RS09340 PF07690 Major Facilitator Superfamily LFZ55_RS09345 PF00682 HMGL-like LFZ55_RS09355 PF03737 Aldolase/RraA LFZ55_RS09355 PF00180 Isocitrate/isopropylmalate dehydrogenase LFZ55_RS09360 PF03737 Aldolase/RraA LFZ55_RS09360 PF00180 Isocitrate/isopropylmalate dehydrogenase LFZ55_RS09370 PF03466 LysR substrate binding domain LFZ55_RS09370 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LFZ55_RS09385 PF01554 MatE LFZ55_RS09400 PF01048 Phosphorylase superfamily LFZ55_RS09400 PF10423 Bacterial AMP nucleoside phosphorylase N-terminus LFZ55_RS09410 PF13356 Arm DNA-binding domain LFZ55_RS09410 PF00589 Phage integrase family LFZ55_RS09425 PF13356 Arm DNA-binding domain LFZ55_RS09425 PF00589 Phage integrase family LFZ55_RS09435 PF06167 Glucose-regulated metallo-peptidase M90 LFZ55_RS09445 PF00313 'Cold-shock' DNA-binding domain LFZ55_RS09465 PF01966 HD domain LFZ55_RS09470 PF00145 C-5 cytosine-specific DNA methylase LFZ55_RS09470 PF18284 DNA methylase N-terminal domain LFZ55_RS09475 PF03852 DNA mismatch endonuclease Vsr LFZ55_RS09480 PF00892 EamA-like transporter family LFZ55_RS09485 PF05661 Protein of unknown function (DUF808) LFZ55_RS09490 PF09926 Uncharacterized small protein (DUF2158) LFZ55_RS09495 PF00990 Diguanylate cyclase, GGDEF domain LFZ55_RS09495 PF17151 Periplasmic sensor domain LFZ55_RS09505 PF10733 Protein of unknown function (DUF2525) LFZ55_RS09510 PF10781 Dextransucrase DSRB LFZ55_RS09515 PF00196 Bacterial regulatory proteins, luxR family LFZ55_RS09520 PF01311 Bacterial export proteins, family 1 LFZ55_RS09525 PF01313 Bacterial export proteins, family 3 LFZ55_RS09530 PF00813 FliP family LFZ55_RS09535 PF04347 Flagellar biosynthesis protein, FliO LFZ55_RS09540 PF16973 Flagellar motor switch protein FliN N-terminal LFZ55_RS09540 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term LFZ55_RS09545 PF02154 Flagellar motor switch protein FliM LFZ55_RS09545 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term LFZ55_RS09550 PF03748 Flagellar basal body-associated protein FliL LFZ55_RS09555 PF02120 Flagellar hook-length control protein FliK LFZ55_RS09560 PF02050 Flagellar FliJ protein LFZ55_RS09565 PF18269 T3SS EscN ATPase C-terminal domain LFZ55_RS09565 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain LFZ55_RS09570 PF02108 Flagellar assembly protein FliH LFZ55_RS09575 PF01706 FliG C-terminal domain LFZ55_RS09575 PF14841 FliG middle domain LFZ55_RS09575 PF14842 FliG N-terminal domain LFZ55_RS09580 PF08345 Flagellar M-ring protein C-terminal LFZ55_RS09580 PF01514 Secretory protein of YscJ/FliF family LFZ55_RS09585 PF02049 Flagellar hook-basal body complex protein FliE LFZ55_RS09595 PF01206 Sulfurtransferase TusA LFZ55_RS09600 PF04143 Sulphur transport LFZ55_RS09605 PF13987 YedD-like protein LFZ55_RS09610 PF00128 Alpha amylase, catalytic domain LFZ55_RS09610 PF02806 Alpha amylase, C-terminal all-beta domain LFZ55_RS09615 PF05400 Flagellar protein FliT LFZ55_RS09620 PF02561 Flagellar protein FliS LFZ55_RS09625 PF02465 Flagellar hook-associated protein 2 N-terminus LFZ55_RS09625 PF07195 Flagellar hook-associated protein 2 C-terminus LFZ55_RS09625 PF07196 Flagellin hook IN motif LFZ55_RS09630 PF00700 Bacterial flagellin C-terminal helical region LFZ55_RS09630 PF08884 Flagellin D3 domain LFZ55_RS09630 PF00669 Bacterial flagellin N-terminal helical region LFZ55_RS09640 PF04545 Sigma-70, region 4 LFZ55_RS09640 PF04539 Sigma-70 region 3 LFZ55_RS09640 PF04542 Sigma-70 region 2 LFZ55_RS09645 PF02899 Phage integrase, N-terminal SAM-like domain LFZ55_RS09650 PF00497 Bacterial extracellular solute-binding proteins, family 3 LFZ55_RS09655 PF00291 Pyridoxal-phosphate dependent enzyme LFZ55_RS09660 PF00528 Binding-protein-dependent transport system inner membrane component LFZ55_RS09665 PF00005 ABC transporter LFZ55_RS09670 PF00196 Bacterial regulatory proteins, luxR family LFZ55_RS09670 PF03472 Autoinducer binding domain LFZ55_RS09675 PF10769 Protein of unknown function (DUF2594) LFZ55_RS09685 PF00072 Response regulator receiver domain LFZ55_RS09685 PF00196 Bacterial regulatory proteins, luxR family LFZ55_RS09690 PF01541 GIY-YIG catalytic domain LFZ55_RS09690 PF02151 UvrB/uvrC motif LFZ55_RS09690 PF08459 UvrC Helix-hairpin-helix N-terminal LFZ55_RS09695 PF01066 CDP-alcohol phosphatidyltransferase LFZ55_RS09735 PF02810 SEC-C motif LFZ55_RS09735 PF03695 Uncharacterised protein family (UPF0149) LFZ55_RS09740 PF03222 Tryptophan/tyrosine permease family LFZ55_RS09745 PF10678 Protein of unknown function (DUF2492) LFZ55_RS09750 PF00210 Ferritin-like domain LFZ55_RS09755 PF13992 YecR-like lipoprotein LFZ55_RS09765 PF10964 Protein of unknown function (DUF2766) LFZ55_RS09770 PF00210 Ferritin-like domain LFZ55_RS09785 PF02358 Trehalose-phosphatase LFZ55_RS09790 PF00982 Glycosyltransferase family 20 LFZ55_RS09795 PF00582 Universal stress protein family LFZ55_RS09805 PF05247 Flagellar transcriptional activator (FlhD) LFZ55_RS09810 PF05280 Flagellar transcriptional activator (FlhC) LFZ55_RS09815 PF01618 MotA/TolQ/ExbB proton channel family LFZ55_RS09820 PF00691 OmpA family LFZ55_RS09820 PF13677 Membrane MotB of proton-channel complex MotA/MotB LFZ55_RS09825 PF01584 CheW-like domain LFZ55_RS09825 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LFZ55_RS09825 PF02895 Signal transducing histidine kinase, homodimeric domain LFZ55_RS09825 PF09078 CheY binding LFZ55_RS09825 PF01627 Hpt domain LFZ55_RS09830 PF01584 CheW-like domain LFZ55_RS09840 PF02203 Tar ligand binding domain homologue LFZ55_RS09840 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain LFZ55_RS09840 PF00672 HAMP domain LFZ55_RS09845 PF01739 CheR methyltransferase, SAM binding domain LFZ55_RS09845 PF03705 CheR methyltransferase, all-alpha domain LFZ55_RS09850 PF00072 Response regulator receiver domain LFZ55_RS09850 PF01339 CheB methylesterase LFZ55_RS09855 PF00072 Response regulator receiver domain LFZ55_RS09860 PF04344 Chemotaxis phosphatase, CheZ LFZ55_RS09865 PF01312 FlhB HrpN YscU SpaS Family LFZ55_RS09870 PF00771 FHIPEP family LFZ55_RS09875 PF06366 Flagellar protein FlhE LFZ55_RS09880 PF07470 Glycosyl Hydrolase Family 88 LFZ55_RS09885 PF03717 Penicillin-binding Protein dimerisation domain LFZ55_RS09885 PF00905 Penicillin binding protein transpeptidase domain LFZ55_RS09890 PF03485 Arginyl tRNA synthetase N terminal domain LFZ55_RS09890 PF05746 DALR anticodon binding domain LFZ55_RS09890 PF00750 tRNA synthetases class I (R) LFZ55_RS09895 PF06185 YecM protein LFZ55_RS09900 PF03932 CutC family LFZ55_RS09905 PF08003 Protein of unknown function (DUF1698) LFZ55_RS09910 PF13649 Methyltransferase domain LFZ55_RS09915 PF01124 MAPEG family LFZ55_RS09920 PF01904 Protein of unknown function DUF72 LFZ55_RS09925 PF00857 Isochorismatase family LFZ55_RS09930 PF02938 GAD domain LFZ55_RS09930 PF00152 tRNA synthetases class II (D, K and N) LFZ55_RS09930 PF01336 OB-fold nucleic acid binding domain LFZ55_RS09935 PF00293 NUDIX domain LFZ55_RS09940 PF01709 Transcriptional regulator LFZ55_RS09945 PF02075 Crossover junction endodeoxyribonuclease RuvC LFZ55_RS09950 PF01330 RuvA N terminal domain LFZ55_RS09950 PF07499 RuvA, C-terminal domain LFZ55_RS09955 PF05491 RuvB C-terminal winged helix domain LFZ55_RS09955 PF05496 Holliday junction DNA helicase RuvB P-loop domain LFZ55_RS09955 PF17864 RuvB AAA lid domain LFZ55_RS09960 PF00950 ABC 3 transport family LFZ55_RS09965 PF00005 ABC transporter LFZ55_RS09970 PF01297 Zinc-uptake complex component A periplasmic LFZ55_RS09975 PF08525 Opacity-associated protein A N-terminal motif LFZ55_RS09975 PF01476 LysM domain LFZ55_RS09975 PF01551 Peptidase family M23 LFZ55_RS09985 PF03279 Bacterial lipid A biosynthesis acyltransferase LFZ55_RS09990 PF11924 Inverse autotransporter, beta-domain LFZ55_RS09990 PF02369 Bacterial Ig-like domain (group 1) LFZ55_RS09990 PF09134 Invasin, domain 3 LFZ55_RS10000 PF02887 Pyruvate kinase, alpha/beta domain LFZ55_RS10000 PF00224 Pyruvate kinase, barrel domain LFZ55_RS10005 PF01380 SIS domain LFZ55_RS10005 PF01418 Helix-turn-helix domain, rpiR family LFZ55_RS10010 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain LFZ55_RS10010 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain LFZ55_RS10015 PF00920 Dehydratase family LFZ55_RS10020 PF01081 KDPG and KHG aldolase LFZ55_RS10025 PF02222 ATP-grasp domain LFZ55_RS10030 PF07130 YebG protein LFZ55_RS10035 PF13995 YebF-like protein LFZ55_RS10040 PF04391 Protein of unknown function (DUF533) LFZ55_RS10045 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain LFZ55_RS10045 PF00326 Prolyl oligopeptidase family LFZ55_RS10050 PF00929 Exonuclease LFZ55_RS10055 PF00795 Carbon-nitrogen hydrolase LFZ55_RS10060 PF06440 DNA polymerase III, theta subunit LFZ55_RS10065 PF04234 CopC domain LFZ55_RS10070 PF05425 Copper resistance protein D LFZ55_RS10075 PF10709 Protein of unknown function (DUF2511) LFZ55_RS10085 PF00872 Transposase, Mutator family LFZ55_RS10090 PF13333 Integrase core domain LFZ55_RS10090 PF00665 Integrase core domain LFZ55_RS10090 PF13276 HTH-like domain LFZ55_RS10110 PF01527 Transposase LFZ55_RS10185 PF03372 Endonuclease/Exonuclease/phosphatase family LFZ55_RS10210 PF02753 Pili assembly chaperone PapD, C-terminal domain LFZ55_RS10210 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain LFZ55_RS10215 PF13953 PapC C-terminal domain LFZ55_RS10215 PF13954 PapC N-terminal domain LFZ55_RS10215 PF00577 Outer membrane usher protein LFZ55_RS10220 PF00419 Fimbrial protein LFZ55_RS10240 PF07166 Protein of unknown function (DUF1398) LFZ55_RS10245 PF05364 Salmonella type III secretion SopE effector N-terminus LFZ55_RS10245 PF07487 SopE GEF domain LFZ55_RS10255 PF00149 Calcineurin-like phosphoesterase LFZ55_RS10260 PF07358 Protein of unknown function (DUF1482) LFZ55_RS10265 PF07351 Protein of unknown function (DUF1480) LFZ55_RS10270 PF01189 16S rRNA methyltransferase RsmB/F LFZ55_RS10270 PF13636 RNA-binding PUA-like domain of methyltransferase RsmF LFZ55_RS10270 PF17125 N-terminal domain of 16S rRNA methyltransferase RsmF LFZ55_RS10275 PF02470 MlaD protein LFZ55_RS10280 PF04403 Paraquat-inducible protein A LFZ55_RS10285 PF13185 GAF domain LFZ55_RS10290 PF17516 ProQ C-terminal domain LFZ55_RS10290 PF04352 ProQ/FINO family LFZ55_RS10295 PF11818 C-terminal domain of tail specific protease (DUF3340) LFZ55_RS10295 PF00595 PDZ domain LFZ55_RS10295 PF03572 Peptidase family S41 LFZ55_RS10295 PF17804 Tail specific protease N-terminal domain LFZ55_RS10300 PF01435 Peptidase family M48 LFZ55_RS10310 PF07690 Major Facilitator Superfamily LFZ55_RS10315 PF09339 IclR helix-turn-helix domain LFZ55_RS10315 PF01614 Bacterial transcriptional regulator LFZ55_RS10320 PF13996 YobH-like protein LFZ55_RS10325 PF13998 MgrB protein LFZ55_RS10330 PF13974 YebO-like protein LFZ55_RS10340 PF10736 Protein of unknown function (DUF2627) LFZ55_RS10345 PF00313 'Cold-shock' DNA-binding domain LFZ55_RS10350 PF03717 Penicillin-binding Protein dimerisation domain LFZ55_RS10350 PF00905 Penicillin binding protein transpeptidase domain LFZ55_RS10355 PF13847 Methyltransferase domain LFZ55_RS10360 PF02659 Putative manganese efflux pump LFZ55_RS10370 PF06173 Protein of unknown function (DUF986) LFZ55_RS10375 PF03613 PTS system mannose/fructose/sorbose family IID component LFZ55_RS10380 PF03609 PTS system sorbose-specific iic component LFZ55_RS10385 PF03830 PTS system sorbose subfamily IIB component LFZ55_RS10385 PF03610 PTS system fructose IIA component LFZ55_RS10395 PF03741 Integral membrane protein TerC family LFZ55_RS10395 PF03471 Transporter associated domain LFZ55_RS10400 PF00563 EAL domain LFZ55_RS10400 PF12792 CSS motif domain associated with EAL LFZ55_RS10405 PF03315 Serine dehydratase beta chain LFZ55_RS10405 PF03313 Serine dehydratase alpha chain LFZ55_RS10410 PF00293 NUDIX domain LFZ55_RS10415 PF00425 chorismate binding enzyme LFZ55_RS10415 PF04715 Anthranilate synthase component I, N terminal region LFZ55_RS10420 PF03701 Uncharacterised protein family (UPF0181) LFZ55_RS10425 PF01042 Endoribonuclease L-PSP LFZ55_RS10430 PF13307 Helicase C-terminal domain LFZ55_RS10430 PF04851 Type III restriction enzyme, res subunit LFZ55_RS10435 PF00814 Glycoprotease family LFZ55_RS10440 PF03843 Outer membrane lipoprotein Slp family LFZ55_RS10450 PF00501 AMP-binding enzyme LFZ55_RS10450 PF13193 AMP-binding enzyme C-terminal domain LFZ55_RS10455 PF00570 HRDC domain LFZ55_RS10455 PF01612 3'-5' exonuclease LFZ55_RS10460 PF03776 Septum formation topological specificity factor MinE LFZ55_RS10465 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain LFZ55_RS10470 PF05209 Septum formation inhibitor MinC, N-terminal domain LFZ55_RS10470 PF03775 Septum formation inhibitor MinC, C-terminal domain LFZ55_RS10480 PF01557 Fumarylacetoacetate (FAA) hydrolase family LFZ55_RS10485 PF03692 Putative zinc- or iron-chelating domain LFZ55_RS10495 PF08178 GnsA/GnsB toxin of bacterial toxin-antitoxin system LFZ55_RS10505 PF02600 Disulfide bond formation protein DsbB LFZ55_RS10510 PF06450 Bacterial Na+/H+ antiporter B (NhaB) LFZ55_RS10515 PF07840 FadR C-terminal domain LFZ55_RS10515 PF00392 Bacterial regulatory proteins, gntR family LFZ55_RS10520 PF04293 SpoVR like protein LFZ55_RS10525 PF01266 FAD dependent oxidoreductase LFZ55_RS10530 PF00842 Alanine racemase, C-terminal domain LFZ55_RS10530 PF01168 Alanine racemase, N-terminal domain LFZ55_RS10535 PF00999 Sodium/hydrogen exchanger family LFZ55_RS10535 PF03471 Transporter associated domain LFZ55_RS10535 PF02080 TrkA-C domain LFZ55_RS10540 PF02016 LD-carboxypeptidase N-terminal domain LFZ55_RS10540 PF17676 LD-carboxypeptidase C-terminal domain LFZ55_RS10545 PF01464 Transglycosylase SLT domain LFZ55_RS10550 PF07238 PilZ domain LFZ55_RS10550 PF07317 Flagellar regulator YcgR LFZ55_RS10555 PF04226 Transglycosylase associated protein LFZ55_RS10560 PF01204 Trehalase LFZ55_RS10565 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase LFZ55_RS10565 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain LFZ55_RS10570 PF08173 Membrane bound YbgT-like protein LFZ55_RS10575 PF02322 Cytochrome bd terminal oxidase subunit II LFZ55_RS10580 PF01654 Cytochrome bd terminal oxidase subunit I LFZ55_RS10585 PF04809 HupH hydrogenase expression protein, C-terminal conserved region LFZ55_RS10590 PF07449 Hydrogenase-1 expression protein HyaE LFZ55_RS10595 PF01750 Hydrogenase maturation protease LFZ55_RS10600 PF01292 Prokaryotic cytochrome b561 LFZ55_RS10605 PF00374 Nickel-dependent hydrogenase LFZ55_RS10610 PF14720 NiFe/NiFeSe hydrogenase small subunit C-terminal LFZ55_RS10610 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit LFZ55_RS10625 PF06178 Oligogalacturonate-specific porin protein (KdgM) LFZ55_RS10630 PF00884 Sulfatase LFZ55_RS10635 PF08220 DeoR-like helix-turn-helix domain LFZ55_RS10635 PF00455 DeoR C terminal sensor domain LFZ55_RS10640 PF03830 PTS system sorbose subfamily IIB component LFZ55_RS10645 PF03609 PTS system sorbose-specific iic component LFZ55_RS10650 PF03613 PTS system mannose/fructose/sorbose family IID component LFZ55_RS10655 PF03610 PTS system fructose IIA component LFZ55_RS10660 PF07470 Glycosyl Hydrolase Family 88 LFZ55_RS10665 PF04055 Radical SAM superfamily LFZ55_RS10665 PF13186 Iron-sulfur cluster-binding domain LFZ55_RS10670 PF00884 Sulfatase LFZ55_RS10685 PF00593 TonB dependent receptor LFZ55_RS10685 PF07715 TonB-dependent Receptor Plug Domain LFZ55_RS10690 PF13193 AMP-binding enzyme C-terminal domain LFZ55_RS10690 PF00501 AMP-binding enzyme LFZ55_RS10695 PF00975 Thioesterase domain LFZ55_RS10705 PF16197 Ketoacyl-synthetase C-terminal extension LFZ55_RS10705 PF00668 Condensation domain LFZ55_RS10705 PF00109 Beta-ketoacyl synthase, N-terminal domain LFZ55_RS10705 PF00698 Acyl transferase domain LFZ55_RS10705 PF02801 Beta-ketoacyl synthase, C-terminal domain LFZ55_RS10705 PF00550 Phosphopantetheine attachment site LFZ55_RS10710 PF08242 Methyltransferase domain LFZ55_RS10710 PF00668 Condensation domain LFZ55_RS10710 PF00550 Phosphopantetheine attachment site LFZ55_RS10710 PF00501 AMP-binding enzyme LFZ55_RS10725 PF08021 Siderophore-interacting FAD-binding domain LFZ55_RS10725 PF00664 ABC transporter transmembrane region LFZ55_RS10725 PF04954 Siderophore-interacting protein LFZ55_RS10725 PF00005 ABC transporter LFZ55_RS10730 PF00005 ABC transporter LFZ55_RS10730 PF00664 ABC transporter transmembrane region LFZ55_RS10735 PF07690 Major Facilitator Superfamily LFZ55_RS10740 PF00425 chorismate binding enzyme LFZ55_RS10745 PF17862 AAA+ lid domain LFZ55_RS10745 PF00004 ATPase family associated with various cellular activities (AAA) LFZ55_RS10745 PF01434 Peptidase family M41 LFZ55_RS10835 PF01926 50S ribosome-binding GTPase LFZ55_RS10835 PF06071 Protein of unknown function (DUF933) LFZ55_RS10840 PF01195 Peptidyl-tRNA hydrolase LFZ55_RS10845 PF10762 Protein of unknown function (DUF2583) LFZ55_RS10850 PF00916 Sulfate permease family LFZ55_RS10850 PF01740 STAS domain LFZ55_RS10855 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase LFZ55_RS10855 PF14572 Phosphoribosyl synthetase-associated domain LFZ55_RS10860 PF00288 GHMP kinases N terminal domain LFZ55_RS10860 PF08544 GHMP kinases C terminal LFZ55_RS10865 PF03550 Outer membrane lipoprotein LolB LFZ55_RS10870 PF01488 Shikimate / quinate 5-dehydrogenase LFZ55_RS10870 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain LFZ55_RS10870 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain LFZ55_RS10875 PF00472 RF-1 domain LFZ55_RS10875 PF03462 PCRF domain LFZ55_RS10880 PF17827 PrmC N-terminal domain LFZ55_RS10880 PF13847 Methyltransferase domain LFZ55_RS10885 PF04247 Invasion gene expression up-regulator, SirB LFZ55_RS10890 PF13369 Transglutaminase-like superfamily LFZ55_RS10895 PF00793 DAHP synthetase I family LFZ55_RS10900 PF01699 Sodium/calcium exchanger protein LFZ55_RS10905 PF06150 ChaB LFZ55_RS10910 PF02635 DsrE/DsrF-like family LFZ55_RS10915 PF11924 Inverse autotransporter, beta-domain LFZ55_RS10920 PF00072 Response regulator receiver domain LFZ55_RS10920 PF00196 Bacterial regulatory proteins, luxR family LFZ55_RS10925 PF07730 Histidine kinase LFZ55_RS10925 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LFZ55_RS10925 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term LFZ55_RS10925 PF00672 HAMP domain LFZ55_RS10935 PF07690 Major Facilitator Superfamily LFZ55_RS10940 PF14710 Respiratory nitrate reductase alpha N-terminal LFZ55_RS10940 PF00384 Molybdopterin oxidoreductase LFZ55_RS10940 PF01568 Molydopterin dinucleotide binding domain LFZ55_RS10945 PF14711 Respiratory nitrate reductase beta C-terminal LFZ55_RS10945 PF13247 4Fe-4S dicluster domain LFZ55_RS10950 PF02613 Nitrate reductase delta subunit LFZ55_RS10955 PF02665 Nitrate reductase gamma subunit LFZ55_RS10985 PF00551 Formyl transferase LFZ55_RS10985 PF01842 ACT domain LFZ55_RS10990 PF02810 SEC-C motif LFZ55_RS10995 PF01734 Patatin-like phospholipase LFZ55_RS11000 PF00072 Response regulator receiver domain LFZ55_RS11005 PF00483 Nucleotidyl transferase LFZ55_RS11010 PF00816 H-NS histone family LFZ55_RS11015 PF00265 Thymidine kinase LFZ55_RS11020 PF00171 Aldehyde dehydrogenase family LFZ55_RS11020 PF00465 Iron-containing alcohol dehydrogenase LFZ55_RS11025 PF01914 MarC family integral membrane protein LFZ55_RS11035 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle LFZ55_RS11040 PF00528 Binding-protein-dependent transport system inner membrane component LFZ55_RS11045 PF00528 Binding-protein-dependent transport system inner membrane component LFZ55_RS11045 PF12911 N-terminal TM domain of oligopeptide transport permease C LFZ55_RS11050 PF00005 ABC transporter LFZ55_RS11050 PF08352 Oligopeptide/dipeptide transporter, C-terminal region LFZ55_RS11055 PF08352 Oligopeptide/dipeptide transporter, C-terminal region LFZ55_RS11055 PF00005 ABC transporter LFZ55_RS11060 PF00520 Ion transport protein LFZ55_RS11060 PF00027 Cyclic nucleotide-binding domain LFZ55_RS11065 PF04269 Protein of unknown function, DUF440 LFZ55_RS11070 PF13091 PLD-like domain LFZ55_RS11070 PF13396 Phospholipase_D-nuclease N-terminal LFZ55_RS11080 PF03795 YCII-related domain LFZ55_RS11085 PF03544 Gram-negative bacterial TonB protein C-terminal LFZ55_RS11090 PF03061 Thioesterase superfamily LFZ55_RS11095 PF04279 Intracellular septation protein A LFZ55_RS11105 PF03692 Putative zinc- or iron-chelating domain LFZ55_RS11110 PF03922 OmpW family LFZ55_RS11115 PF05067 Manganese containing catalase LFZ55_RS11120 PF05974 Domain of unknown function (DUF892) LFZ55_RS11125 PF05974 Domain of unknown function (DUF892) LFZ55_RS11130 PF10685 Stress-induced bacterial acidophilic repeat motif LFZ55_RS11135 PF00290 Tryptophan synthase alpha chain LFZ55_RS11140 PF00291 Pyridoxal-phosphate dependent enzyme LFZ55_RS11145 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase LFZ55_RS11145 PF00218 Indole-3-glycerol phosphate synthase LFZ55_RS11150 PF02885 Glycosyl transferase family, helical bundle domain LFZ55_RS11150 PF00117 Glutamine amidotransferase class-I LFZ55_RS11150 PF00591 Glycosyl transferase family, a/b domain LFZ55_RS11155 PF04715 Anthranilate synthase component I, N terminal region LFZ55_RS11155 PF00425 chorismate binding enzyme LFZ55_RS11160 PF08255 Trp-operon Leader Peptide LFZ55_RS11165 PF02811 PHP domain LFZ55_RS11170 PF01300 Telomere recombination LFZ55_RS11175 PF01479 S4 domain LFZ55_RS11175 PF00849 RNA pseudouridylate synthase LFZ55_RS11180 PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP LFZ55_RS11185 PF00106 short chain dehydrogenase LFZ55_RS11190 PF01343 Peptidase family S49 LFZ55_RS11190 PF08496 Peptidase family S49 N-terminal LFZ55_RS11195 PF10692 Protein of unknown function (DUF2498) LFZ55_RS11205 PF01396 Topoisomerase DNA binding C4 zinc finger LFZ55_RS11205 PF01131 DNA topoisomerase LFZ55_RS11205 PF01751 Toprim domain LFZ55_RS11205 PF08272 Topoisomerase I zinc-ribbon-like LFZ55_RS11210 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LFZ55_RS11210 PF03466 LysR substrate binding domain LFZ55_RS11225 PF00330 Aconitase family (aconitate hydratase) LFZ55_RS11225 PF00694 Aconitase C-terminal domain LFZ55_RS11230 PF00925 GTP cyclohydrolase II LFZ55_RS11235 PF01569 PAP2 superfamily LFZ55_RS11245 PF06305 Lipopolysaccharide assembly protein A domain LFZ55_RS11250 PF18073 Rubredoxin metal binding domain LFZ55_RS11255 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family LFZ55_RS11260 PF01253 Translation initiation factor SUI1 LFZ55_RS11265 PF05433 Glycine zipper 2TM domain LFZ55_RS11270 PF00455 DeoR C terminal sensor domain LFZ55_RS11270 PF08220 DeoR-like helix-turn-helix domain LFZ55_RS11280 PF00990 Diguanylate cyclase, GGDEF domain LFZ55_RS11280 PF13426 PAS domain LFZ55_RS11280 PF00563 EAL domain LFZ55_RS11285 PF17876 Cold shock domain LFZ55_RS11285 PF08206 Ribonuclease B OB domain LFZ55_RS11285 PF00773 RNB domain LFZ55_RS11285 PF00575 S1 RNA binding domain LFZ55_RS11315 PF00005 ABC transporter LFZ55_RS11320 PF08352 Oligopeptide/dipeptide transporter, C-terminal region LFZ55_RS11320 PF00005 ABC transporter LFZ55_RS11325 PF00528 Binding-protein-dependent transport system inner membrane component LFZ55_RS11325 PF12911 N-terminal TM domain of oligopeptide transport permease C LFZ55_RS11340 PF06183 DinI-like family LFZ55_RS11365 PF15645 Dermonecrotoxin of the Papain-like fold LFZ55_RS11375 PF11799 impB/mucB/samB family C-terminal domain LFZ55_RS11375 PF00817 impB/mucB/samB family LFZ55_RS11375 PF13438 Domain of unknown function (DUF4113) LFZ55_RS11380 PF00528 Binding-protein-dependent transport system inner membrane component LFZ55_RS11385 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle LFZ55_RS11390 PF02954 Bacterial regulatory protein, Fis family LFZ55_RS11390 PF00158 Sigma-54 interaction domain LFZ55_RS11395 PF04012 PspA/IM30 family LFZ55_RS11400 PF06667 Phage shock protein B LFZ55_RS11405 PF04024 PspC domain LFZ55_RS11410 PF09584 Phage shock protein PspD (Phageshock_PspD) LFZ55_RS11415 PF00128 Alpha amylase, catalytic domain LFZ55_RS11420 PF01547 Bacterial extracellular solute-binding protein LFZ55_RS11425 PF00528 Binding-protein-dependent transport system inner membrane component LFZ55_RS11430 PF00528 Binding-protein-dependent transport system inner membrane component LFZ55_RS11435 PF00107 Zinc-binding dehydrogenase LFZ55_RS11440 PF01261 Xylose isomerase-like TIM barrel LFZ55_RS11445 PF01408 Oxidoreductase family, NAD-binding Rossmann fold LFZ55_RS11445 PF02894 Oxidoreductase family, C-terminal alpha/beta domain LFZ55_RS11450 PF03633 Glycosyl hydrolase family 65, C-terminal domain LFZ55_RS11450 PF03632 Glycosyl hydrolase family 65 central catalytic domain LFZ55_RS11450 PF03636 Glycosyl hydrolase family 65, N-terminal domain LFZ55_RS11455 PF13419 Haloacid dehalogenase-like hydrolase LFZ55_RS11460 PF03459 TOBE domain LFZ55_RS11460 PF17912 MalK OB fold domain LFZ55_RS11460 PF00005 ABC transporter LFZ55_RS11465 PF09381 Outer membrane protein G (OmpG) LFZ55_RS11470 PF00356 Bacterial regulatory proteins, lacI family LFZ55_RS11470 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family LFZ55_RS11475 PF04317 YcjX-like family, DUF463 LFZ55_RS11480 PF05128 Domain of unknown function (DUF697) LFZ55_RS11485 PF00158 Sigma-54 interaction domain LFZ55_RS11485 PF18024 Helix-turn-helix domain LFZ55_RS11490 PF08534 Redoxin LFZ55_RS11495 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain LFZ55_RS11495 PF13378 Enolase C-terminal domain-like LFZ55_RS11500 PF00246 Zinc carboxypeptidase LFZ55_RS11505 PF03498 Cytolethal distending toxin A/C domain LFZ55_RS11510 PF03372 Endonuclease/Exonuclease/phosphatase family LFZ55_RS11515 PF03498 Cytolethal distending toxin A/C domain LFZ55_RS11520 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle LFZ55_RS11525 PF00248 Aldo/keto reductase family LFZ55_RS11545 PF08534 Redoxin LFZ55_RS11565 PF00924 Mechanosensitive ion channel LFZ55_RS11570 PF10749 Protein of unknown function (DUF2534) LFZ55_RS11575 PF00582 Universal stress protein family LFZ55_RS11580 PF00027 Cyclic nucleotide-binding domain LFZ55_RS11580 PF13545 Crp-like helix-turn-helix domain LFZ55_RS11585 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain LFZ55_RS11585 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain LFZ55_RS11590 PF01713 Smr domain LFZ55_RS11595 PF02203 Tar ligand binding domain homologue LFZ55_RS11595 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain LFZ55_RS11595 PF00672 HAMP domain LFZ55_RS11600 PF01544 CorA-like Mg2+ transporter protein LFZ55_RS11610 PF03880 DbpA RNA binding domain LFZ55_RS11610 PF00270 DEAD/DEAH box helicase LFZ55_RS11610 PF00271 Helicase conserved C-terminal domain LFZ55_RS11615 PF01171 PP-loop family LFZ55_RS11620 PF00589 Phage integrase family LFZ55_RS11620 PF12167 Arm DNA-binding domain LFZ55_RS11640 PF00893 Small Multidrug Resistance protein LFZ55_RS11645 PF00582 Universal stress protein family LFZ55_RS11655 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg LFZ55_RS11655 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase LFZ55_RS11655 PF10371 Domain of unknown function LFZ55_RS11655 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II LFZ55_RS11655 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain LFZ55_RS11665 PF03891 Domain of unknown function (DUF333) LFZ55_RS11670 PF03724 META domain LFZ55_RS11675 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain LFZ55_RS11675 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain LFZ55_RS11680 PF11739 Dicarboxylate transport LFZ55_RS11685 PF13617 YnbE-like lipoprotein LFZ55_RS11690 PF07027 Protein of unknown function (DUF1318) LFZ55_RS11700 PF02525 Flavodoxin-like fold LFZ55_RS11705 PF00270 DEAD/DEAH box helicase LFZ55_RS11705 PF11898 Domain of unknown function (DUF3418) LFZ55_RS11705 PF04408 Helicase associated domain (HA2) LFZ55_RS11705 PF00271 Helicase conserved C-terminal domain LFZ55_RS11705 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold LFZ55_RS11710 PF02698 DUF218 domain LFZ55_RS11715 PF01292 Prokaryotic cytochrome b561 LFZ55_RS11720 PF08242 Methyltransferase domain LFZ55_RS11730 PF00528 Binding-protein-dependent transport system inner membrane component LFZ55_RS11735 PF00005 ABC transporter LFZ55_RS11740 PF00528 Binding-protein-dependent transport system inner membrane component LFZ55_RS11745 PF00497 Bacterial extracellular solute-binding proteins, family 3 LFZ55_RS11755 PF00657 GDSL-like Lipase/Acylhydrolase LFZ55_RS11755 PF06767 Sif protein LFZ55_RS11775 PF03797 Autotransporter beta-domain LFZ55_RS11800 PF03245 Bacteriophage Rz lysis protein LFZ55_RS11825 PF02583 Metal-sensitive transcriptional repressor LFZ55_RS11830 PF08240 Alcohol dehydrogenase GroES-like domain LFZ55_RS11830 PF00107 Zinc-binding dehydrogenase LFZ55_RS11840 PF02203 Tar ligand binding domain homologue LFZ55_RS11840 PF00672 HAMP domain LFZ55_RS11840 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain LFZ55_RS11845 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LFZ55_RS11845 PF03466 LysR substrate binding domain LFZ55_RS11850 PF07063 Domain of unknown function (DUF1338) LFZ55_RS11855 PF00135 Carboxylesterase family LFZ55_RS11860 PF04349 Periplasmic glucan biosynthesis protein, MdoG LFZ55_RS11865 PF04264 YceI-like domain LFZ55_RS11870 PF01070 FMN-dependent dehydrogenase LFZ55_RS11875 PF00583 Acetyltransferase (GNAT) family LFZ55_RS11880 PF00455 DeoR C terminal sensor domain LFZ55_RS11880 PF08220 DeoR-like helix-turn-helix domain LFZ55_RS11885 PF00834 Ribulose-phosphate 3 epimerase family LFZ55_RS11890 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 LFZ55_RS11895 PF03437 BtpA family LFZ55_RS11900 PF03611 PTS system sugar-specific permease component LFZ55_RS11905 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit LFZ55_RS11910 PF05343 M42 glutamyl aminopeptidase LFZ55_RS11915 PF13302 Acetyltransferase (GNAT) domain LFZ55_RS11920 PF18836 Beta solenoid repeat from YDCK LFZ55_RS11925 PF03595 Voltage-dependent anion channel LFZ55_RS11930 PF03848 Tellurite resistance protein TehB LFZ55_RS11935 PF11769 Protein of unknown function (DUF3313) LFZ55_RS11940 PF03594 Benzoate membrane transport protein LFZ55_RS11945 PF07883 Cupin domain LFZ55_RS11945 PF01381 Helix-turn-helix LFZ55_RS11950 PF01136 Peptidase family U32 LFZ55_RS11950 PF12392 Collagenase LFZ55_RS11955 PF10829 Protein of unknown function (DUF2554) LFZ55_RS11960 PF02796 Helix-turn-helix domain of resolvase LFZ55_RS11960 PF00239 Resolvase, N terminal domain LFZ55_RS11965 PF00805 Pentapeptide repeats (8 copies) LFZ55_RS11975 PF01569 PAP2 superfamily LFZ55_RS11985 PF01527 Transposase LFZ55_RS12005 PF01427 D-ala-D-ala dipeptidase LFZ55_RS12010 PF00392 Bacterial regulatory proteins, gntR family LFZ55_RS12010 PF00155 Aminotransferase class I and II LFZ55_RS12015 PF00171 Aldehyde dehydrogenase family LFZ55_RS12025 PF10753 Toxin GhoT_OrtT LFZ55_RS12045 PF10735 Protein of unknown function (DUF2526) LFZ55_RS12050 PF04657 Putative inner membrane exporter, YdcZ LFZ55_RS12060 PF16884 N-terminal domain of oxidoreductase LFZ55_RS12060 PF00107 Zinc-binding dehydrogenase LFZ55_RS12070 PF00392 Bacterial regulatory proteins, gntR family LFZ55_RS12070 PF07729 FCD domain LFZ55_RS12075 PF07715 TonB-dependent Receptor Plug Domain LFZ55_RS12075 PF00593 TonB dependent receptor LFZ55_RS12085 PF06004 Bacterial protein of unknown function (DUF903) LFZ55_RS12090 PF00324 Amino acid permease LFZ55_RS12100 PF01361 Tautomerase enzyme LFZ55_RS12105 PF00797 N-acetyltransferase LFZ55_RS12110 PF02567 Phenazine biosynthesis-like protein LFZ55_RS12115 PF02665 Nitrate reductase gamma subunit LFZ55_RS12125 PF07690 Major Facilitator Superfamily LFZ55_RS12135 PF00267 Gram-negative porin LFZ55_RS12145 PF00892 EamA-like transporter family LFZ55_RS12150 PF04879 Molybdopterin oxidoreductase Fe4S4 domain LFZ55_RS12150 PF00384 Molybdopterin oxidoreductase LFZ55_RS12150 PF01568 Molydopterin dinucleotide binding domain LFZ55_RS12155 PF04879 Molybdopterin oxidoreductase Fe4S4 domain LFZ55_RS12155 PF00384 Molybdopterin oxidoreductase LFZ55_RS12155 PF01568 Molydopterin dinucleotide binding domain LFZ55_RS12160 PF12800 4Fe-4S binding domain LFZ55_RS12160 PF09163 Formate dehydrogenase N, transmembrane LFZ55_RS12160 PF13247 4Fe-4S dicluster domain LFZ55_RS12165 PF01292 Prokaryotic cytochrome b561 LFZ55_RS12170 PF08240 Alcohol dehydrogenase GroES-like domain LFZ55_RS12170 PF00107 Zinc-binding dehydrogenase LFZ55_RS12180 PF00390 Malic enzyme, N-terminal domain LFZ55_RS12180 PF03949 Malic enzyme, NAD binding domain LFZ55_RS12185 PF08136 30S ribosomal protein subunit S22 family LFZ55_RS12190 PF10684 Putative biofilm-dependent modulation protein LFZ55_RS12195 PF02566 OsmC-like protein LFZ55_RS12200 PF06109 Haemolysin E (HlyE) LFZ55_RS12215 PF06411 HdeA/HdeB family LFZ55_RS12225 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) LFZ55_RS12225 PF11941 Domain of unknown function (DUF3459) LFZ55_RS12225 PF00128 Alpha amylase, catalytic domain LFZ55_RS12230 PF00128 Alpha amylase, catalytic domain LFZ55_RS12235 PF00128 Alpha amylase, catalytic domain LFZ55_RS12235 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) LFZ55_RS12240 PF00155 Aminotransferase class I and II LFZ55_RS12245 PF03553 Na+/H+ antiporter family LFZ55_RS12250 PF00356 Bacterial regulatory proteins, lacI family LFZ55_RS12285 PF05221 S-adenosyl-L-homocysteine hydrolase LFZ55_RS12285 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain LFZ55_RS12290 PF00356 Bacterial regulatory proteins, lacI family LFZ55_RS12310 PF01320 Colicin immunity protein / pyocin immunity protein LFZ55_RS12315 PF06958 S-type Pyocin LFZ55_RS12345 PF10106 Uncharacterized protein conserved in bacteria (DUF2345) LFZ55_RS12345 PF13296 Putative type VI secretion system Rhs element Vgr LFZ55_RS12345 PF04717 Type VI secretion system, phage-baseplate injector LFZ55_RS12350 PF10431 C-terminal, D2-small domain, of ClpB protein LFZ55_RS12350 PF00004 ATPase family associated with various cellular activities (AAA) LFZ55_RS12350 PF17871 AAA lid domain LFZ55_RS12350 PF07724 AAA domain (Cdc48 subfamily) LFZ55_RS12360 PF13488 Glycine zipper LFZ55_RS12360 PF00691 OmpA family LFZ55_RS12375 PF05943 Type VI secretion protein, EvpB/VC_A0108, tail sheath LFZ55_RS12385 PF14431 YwqJ-like deaminase LFZ55_RS12385 PF18807 Tripartite Tc toxins repeat LFZ55_RS12390 PF18807 Tripartite Tc toxins repeat LFZ55_RS12390 PF14431 YwqJ-like deaminase LFZ55_RS12395 PF00239 Resolvase, N terminal domain LFZ55_RS12395 PF02796 Helix-turn-helix domain of resolvase LFZ55_RS12420 PF02547 Queuosine biosynthesis protein LFZ55_RS12430 PF01494 FAD binding domain LFZ55_RS12435 PF07690 Major Facilitator Superfamily LFZ55_RS12445 PF07690 Major Facilitator Superfamily LFZ55_RS12450 PF08240 Alcohol dehydrogenase GroES-like domain LFZ55_RS12450 PF00107 Zinc-binding dehydrogenase LFZ55_RS12455 PF07729 FCD domain LFZ55_RS12455 PF00392 Bacterial regulatory proteins, gntR family LFZ55_RS12465 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit LFZ55_RS12465 PF14720 NiFe/NiFeSe hydrogenase small subunit C-terminal LFZ55_RS12470 PF00374 Nickel-dependent hydrogenase LFZ55_RS12475 PF01292 Prokaryotic cytochrome b561 LFZ55_RS12480 PF01750 Hydrogenase maturation protease LFZ55_RS12485 PF01455 HupF/HypC family LFZ55_RS12495 PF04809 HupH hydrogenase expression protein, C-terminal conserved region LFZ55_RS12505 PF01155 Hydrogenase/urease nickel incorporation, metallochaperone, hypA LFZ55_RS12510 PF00267 Gram-negative porin LFZ55_RS12525 PF01062 Bestrophin, RFP-TM, chloride channel LFZ55_RS12530 PF08125 Mannitol dehydrogenase C-terminal domain LFZ55_RS12530 PF01232 Mannitol dehydrogenase Rossmann domain LFZ55_RS12535 PF13811 Domain of unknown function (DUF4186) LFZ55_RS12540 PF04960 Glutaminase LFZ55_RS12545 PF00171 Aldehyde dehydrogenase family LFZ55_RS12550 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LFZ55_RS12550 PF03466 LysR substrate binding domain LFZ55_RS12555 PF07690 Major Facilitator Superfamily LFZ55_RS12560 PF01914 MarC family integral membrane protein LFZ55_RS12565 PF01047 MarR family LFZ55_RS12570 PF12833 Helix-turn-helix domain LFZ55_RS12575 PF13999 MarB protein LFZ55_RS12580 PF00072 Response regulator receiver domain LFZ55_RS12580 PF00196 Bacterial regulatory proteins, luxR family LFZ55_RS12590 PF00892 EamA-like transporter family LFZ55_RS12595 PF07690 Major Facilitator Superfamily LFZ55_RS12605 PF04076 Bacterial OB fold (BOF) protein LFZ55_RS12610 PF02464 Competence-damaged protein LFZ55_RS12615 PF10685 Stress-induced bacterial acidophilic repeat motif LFZ55_RS12625 PF01432 Peptidase family M3 LFZ55_RS12630 PF00106 short chain dehydrogenase LFZ55_RS12635 PF07729 FCD domain LFZ55_RS12635 PF00392 Bacterial regulatory proteins, gntR family LFZ55_RS12640 PF14001 YdfZ protein LFZ55_RS12645 PF01232 Mannitol dehydrogenase Rossmann domain LFZ55_RS12645 PF08125 Mannitol dehydrogenase C-terminal domain LFZ55_RS12655 PF02614 Glucuronate isomerase LFZ55_RS12660 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain LFZ55_RS12660 PF13378 Enolase C-terminal domain-like LFZ55_RS12665 PF02694 Uncharacterised BCR, YnfA/UPF0060 family LFZ55_RS12670 PF06932 Protein of unknown function (DUF1283) LFZ55_RS12675 PF13302 Acetyltransferase (GNAT) domain LFZ55_RS12680 PF06788 Uncharacterised protein family (UPF0257) LFZ55_RS12685 PF14431 YwqJ-like deaminase LFZ55_RS12685 PF18807 Tripartite Tc toxins repeat LFZ55_RS12695 PF06649 Protein of unknown function (DUF1161) LFZ55_RS12700 PF01568 Molydopterin dinucleotide binding domain LFZ55_RS12700 PF04879 Molybdopterin oxidoreductase Fe4S4 domain LFZ55_RS12700 PF00384 Molybdopterin oxidoreductase LFZ55_RS12705 PF01568 Molydopterin dinucleotide binding domain LFZ55_RS12705 PF04879 Molybdopterin oxidoreductase Fe4S4 domain LFZ55_RS12705 PF00384 Molybdopterin oxidoreductase LFZ55_RS12710 PF13247 4Fe-4S dicluster domain LFZ55_RS12710 PF12800 4Fe-4S binding domain LFZ55_RS12715 PF04976 DMSO reductase anchor subunit (DmsC) LFZ55_RS12720 PF02613 Nitrate reductase delta subunit LFZ55_RS12725 PF00528 Binding-protein-dependent transport system inner membrane component LFZ55_RS12730 PF04069 Substrate binding domain of ABC-type glycine betaine transport system LFZ55_RS12735 PF00528 Binding-protein-dependent transport system inner membrane component LFZ55_RS12740 PF00571 CBS domain LFZ55_RS12740 PF00005 ABC transporter LFZ55_RS12745 PF00654 Voltage gated chloride channel LFZ55_RS12755 PF00480 ROK family LFZ55_RS12765 PF03466 LysR substrate binding domain LFZ55_RS12765 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LFZ55_RS12770 PF07690 Major Facilitator Superfamily LFZ55_RS12785 PF00089 Trypsin LFZ55_RS12790 PF00893 Small Multidrug Resistance protein LFZ55_RS12795 PF00893 Small Multidrug Resistance protein LFZ55_RS12805 PF01594 AI-2E family transporter LFZ55_RS12810 PF02233 NAD(P) transhydrogenase beta subunit LFZ55_RS12815 PF05222 Alanine dehydrogenase/PNT, N-terminal domain LFZ55_RS12815 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch LFZ55_RS12815 PF01262 Alanine dehydrogenase/PNT, C-terminal domain LFZ55_RS12820 PF07338 Protein of unknown function (DUF1471) LFZ55_RS12825 PF13520 Amino acid permease LFZ55_RS12830 PF06942 GlpM protein LFZ55_RS12835 PF00486 Transcriptional regulatory protein, C terminal LFZ55_RS12835 PF00072 Response regulator receiver domain LFZ55_RS12840 PF00267 Gram-negative porin LFZ55_RS12845 PF13382 Adenine deaminase C-terminal domain LFZ55_RS12845 PF01979 Amidohydrolase family LFZ55_RS12850 PF00512 His Kinase A (phospho-acceptor) domain LFZ55_RS12850 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LFZ55_RS12850 PF00672 HAMP domain LFZ55_RS12855 PF05472 DNA replication terminus site-binding protein (Ter protein) LFZ55_RS12860 PF00206 Lyase LFZ55_RS12860 PF10415 Fumarase C C-terminus LFZ55_RS12865 PF05681 Fumarate hydratase (Fumerase) LFZ55_RS12865 PF05683 Fumarase C-terminus LFZ55_RS12870 PF01238 Phosphomannose isomerase type I LFZ55_RS12875 PF06097 Bacterial protein of unknown function (DUF945) LFZ55_RS12880 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family LFZ55_RS12880 PF00356 Bacterial regulatory proteins, lacI family LFZ55_RS12885 PF02378 Phosphotransferase system, EIIC LFZ55_RS12885 PF00367 phosphotransferase system, EIIB LFZ55_RS12890 PF00155 Aminotransferase class I and II LFZ55_RS12895 PF00962 Adenosine/AMP deaminase LFZ55_RS12900 PF02894 Oxidoreductase family, C-terminal alpha/beta domain LFZ55_RS12900 PF01408 Oxidoreductase family, NAD-binding Rossmann fold LFZ55_RS12910 PF05321 Haemolysin expression modulating protein LFZ55_RS12915 PF10754 Protein of unknown function (DUF2569) LFZ55_RS12920 PF02508 Rnf-Nqr subunit, membrane protein LFZ55_RS12925 PF04060 Putative Fe-S cluster LFZ55_RS12930 PF10531 SLBB domain LFZ55_RS12930 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit LFZ55_RS12930 PF13375 RnfC Barrel sandwich hybrid domain LFZ55_RS12930 PF12838 4Fe-4S dicluster domain LFZ55_RS12935 PF03116 NQR2, RnfD, RnfE family LFZ55_RS12940 PF04205 FMN-binding domain LFZ55_RS12945 PF02508 Rnf-Nqr subunit, membrane protein LFZ55_RS12950 PF10576 Iron-sulfur binding domain of endonuclease III LFZ55_RS12950 PF00633 Helix-hairpin-helix motif LFZ55_RS12950 PF00730 HhH-GPD superfamily base excision DNA repair protein LFZ55_RS12955 PF00854 POT family LFZ55_RS12960 PF02798 Glutathione S-transferase, N-terminal domain LFZ55_RS12960 PF00043 Glutathione S-transferase, C-terminal domain LFZ55_RS12965 PF08543 Phosphomethylpyrimidine kinase LFZ55_RS12970 PF00579 tRNA synthetases class I (W and Y) LFZ55_RS12970 PF01479 S4 domain LFZ55_RS12975 PF01243 Pyridoxamine 5'-phosphate oxidase LFZ55_RS12975 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region LFZ55_RS12980 PF09864 Membrane-bound lysozyme-inhibitor of c-type lysozyme LFZ55_RS12985 PF03702 Anhydro-N-acetylmuramic acid kinase LFZ55_RS12990 PF05433 Glycine zipper 2TM domain LFZ55_RS12995 PF01047 MarR family LFZ55_RS13000 PF07869 Protein of unknown function (DUF1656) LFZ55_RS13005 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion LFZ55_RS13005 PF00529 HlyD membrane-fusion protein of T1SS LFZ55_RS13010 PF04632 Fusaric acid resistance protein family LFZ55_RS13015 PF00080 Copper/zinc superoxide dismutase (SODC) LFZ55_RS13020 PF00248 Aldo/keto reductase family LFZ55_RS13025 PF06945 Protein of unknown function (DUF1289) LFZ55_RS13030 PF16925 Tetracyclin repressor-like, C-terminal domain LFZ55_RS13030 PF00440 Bacterial regulatory proteins, tetR family LFZ55_RS13035 PF00724 NADH:flavin oxidoreductase / NADH oxidase family LFZ55_RS13040 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily LFZ55_RS13045 PF00929 Exonuclease LFZ55_RS13050 PF00462 Glutaredoxin LFZ55_RS13055 PF00877 NlpC/P60 family LFZ55_RS13060 PF02777 Iron/manganese superoxide dismutases, C-terminal domain LFZ55_RS13060 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain LFZ55_RS13075 PF00356 Bacterial regulatory proteins, lacI family LFZ55_RS13080 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LFZ55_RS13080 PF03466 LysR substrate binding domain LFZ55_RS13085 PF07690 Major Facilitator Superfamily LFZ55_RS13095 PF00677 Lumazine binding domain LFZ55_RS13100 PF01554 MatE LFZ55_RS13115 PF01312 FlhB HrpN YscU SpaS Family LFZ55_RS13120 PF01311 Bacterial export proteins, family 1 LFZ55_RS13125 PF01313 Bacterial export proteins, family 3 LFZ55_RS13130 PF00813 FliP family LFZ55_RS13135 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term LFZ55_RS13150 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain LFZ55_RS13150 PF18269 T3SS EscN ATPase C-terminal domain LFZ55_RS13155 PF00771 FHIPEP family LFZ55_RS13165 PF07201 HrpJ-like domain LFZ55_RS13180 PF01514 Secretory protein of YscJ/FliF family LFZ55_RS13220 PF05802 Enterobacterial EspB protein LFZ55_RS13225 PF04888 Secretion system effector C (SseC) like family LFZ55_RS13235 PF03433 EspA-like secreted protein LFZ55_RS13255 PF03958 Bacterial type II/III secretion system short domain LFZ55_RS13255 PF00263 Bacterial type II and III secretion system protein LFZ55_RS13265 PF00072 Response regulator receiver domain LFZ55_RS13265 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LFZ55_RS13265 PF00512 His Kinase A (phospho-acceptor) domain LFZ55_RS13265 PF01627 Hpt domain LFZ55_RS13265 PF00672 HAMP domain LFZ55_RS13270 PF00072 Response regulator receiver domain LFZ55_RS13270 PF00196 Bacterial regulatory proteins, luxR family LFZ55_RS13275 PF13411 MerR HTH family regulatory protein LFZ55_RS13280 PF08349 Protein of unknown function (DUF1722) LFZ55_RS13285 PF10965 Protein of unknown function (DUF2767) LFZ55_RS13290 PF00072 Response regulator receiver domain LFZ55_RS13290 PF00196 Bacterial regulatory proteins, luxR family LFZ55_RS13295 PF00512 His Kinase A (phospho-acceptor) domain LFZ55_RS13295 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LFZ55_RS13300 PF13247 4Fe-4S dicluster domain LFZ55_RS13305 PF03916 Polysulphide reductase, NrfD LFZ55_RS13310 PF00384 Molybdopterin oxidoreductase LFZ55_RS13310 PF01568 Molydopterin dinucleotide binding domain LFZ55_RS13310 PF04879 Molybdopterin oxidoreductase Fe4S4 domain LFZ55_RS13315 PF00294 pfkB family carbohydrate kinase LFZ55_RS13325 PF00561 alpha/beta hydrolase fold LFZ55_RS13330 PF00324 Amino acid permease LFZ55_RS13335 PF00224 Pyruvate kinase, barrel domain LFZ55_RS13335 PF02887 Pyruvate kinase, alpha/beta domain LFZ55_RS13340 PF04728 Lipoprotein leucine-zipper LFZ55_RS13345 PF01476 LysM domain LFZ55_RS13345 PF17969 L,D-transpeptidase C-terminal domain LFZ55_RS13345 PF03734 L,D-transpeptidase catalytic domain LFZ55_RS13350 PF02657 Fe-S metabolism associated domain LFZ55_RS13355 PF00266 Aminotransferase class-V LFZ55_RS13360 PF01458 Uncharacterized protein family (UPF0051) LFZ55_RS13365 PF00005 ABC transporter LFZ55_RS13370 PF01458 Uncharacterized protein family (UPF0051) LFZ55_RS13375 PF01521 Iron-sulphur cluster biosynthesis LFZ55_RS13380 PF00375 Sodium:dicarboxylate symporter family LFZ55_RS13385 PF15930 Domain of unknown function LFZ55_RS13390 PF03061 Thioesterase superfamily LFZ55_RS13395 PF13183 4Fe-4S dicluster domain LFZ55_RS13395 PF02913 FAD linked oxidases, C-terminal domain LFZ55_RS13395 PF01565 FAD binding domain LFZ55_RS13400 PF01594 AI-2E family transporter LFZ55_RS13410 PF01487 Type I 3-dehydroquinase LFZ55_RS13415 PF00391 PEP-utilising enzyme, mobile domain LFZ55_RS13415 PF02896 PEP-utilising enzyme, TIM barrel domain LFZ55_RS13415 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain LFZ55_RS13420 PF03618 Kinase/pyrophosphorylase LFZ55_RS13425 PF00793 DAHP synthetase I family LFZ55_RS13430 PF10636 Hemin uptake protein hemP LFZ55_RS13435 PF02696 Uncharacterized ACR, YdiU/UPF0061 family LFZ55_RS13440 PF00563 EAL domain LFZ55_RS13445 PF00877 NlpC/P60 family LFZ55_RS13450 PF00005 ABC transporter LFZ55_RS13455 PF00255 Glutathione peroxidase LFZ55_RS13460 PF01032 FecCD transport family LFZ55_RS13485 PF00216 Bacterial DNA-binding protein LFZ55_RS13490 PF03484 tRNA synthetase B5 domain LFZ55_RS13490 PF03483 B3/4 domain LFZ55_RS13490 PF01588 Putative tRNA binding domain LFZ55_RS13490 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain LFZ55_RS13490 PF03147 Ferredoxin-fold anticodon binding domain LFZ55_RS13495 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain LFZ55_RS13495 PF01409 tRNA synthetases class II core domain (F) LFZ55_RS13505 PF00453 Ribosomal protein L20 LFZ55_RS13510 PF01632 Ribosomal protein L35 LFZ55_RS13515 PF00707 Translation initiation factor IF-3, C-terminal domain LFZ55_RS13515 PF05198 Translation initiation factor IF-3, N-terminal domain LFZ55_RS13520 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain LFZ55_RS13520 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) LFZ55_RS13520 PF02824 TGS domain LFZ55_RS13520 PF03129 Anticodon binding domain LFZ55_RS13525 PF01223 DNA/RNA non-specific endonuclease LFZ55_RS13540 PF04338 Protein of unknown function, DUF481 LFZ55_RS13545 PF00294 pfkB family carbohydrate kinase LFZ55_RS13550 PF11080 Endoribonuclease GhoS LFZ55_RS13555 PF03881 Fructosamine kinase LFZ55_RS13560 PF14002 YniB-like protein LFZ55_RS13565 PF13419 Haloacid dehalogenase-like hydrolase LFZ55_RS13570 PF04307 LexA-binding, inner membrane-associated putative hydrolase LFZ55_RS13575 PF00375 Sodium:dicarboxylate symporter family LFZ55_RS13580 PF10729 Cell division activator CedA LFZ55_RS13585 PF06628 Catalase-related immune-responsive LFZ55_RS13585 PF18011 C-terminal domain found in long catalases LFZ55_RS13585 PF00199 Catalase LFZ55_RS13590 PF04794 YdjC-like protein LFZ55_RS13595 PF02056 Family 4 glycosyl hydrolase LFZ55_RS13595 PF11975 Family 4 glycosyl hydrolase C-terminal domain LFZ55_RS13600 PF07883 Cupin domain LFZ55_RS13600 PF12833 Helix-turn-helix domain LFZ55_RS13605 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit LFZ55_RS13610 PF02378 Phosphotransferase system, EIIC LFZ55_RS13615 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit LFZ55_RS13625 PF04355 SmpA / OmlA family LFZ55_RS13630 PF02540 NAD synthase LFZ55_RS13640 PF07813 LTXXQ motif family protein LFZ55_RS13650 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family LFZ55_RS13655 PF04996 Succinylarginine dihydrolase LFZ55_RS13660 PF00171 Aldehyde dehydrogenase family LFZ55_RS13665 PF04958 Arginine N-succinyltransferase beta subunit LFZ55_RS13670 PF00202 Aminotransferase class-III LFZ55_RS13680 PF03372 Endonuclease/Exonuclease/phosphatase family LFZ55_RS13685 PF00293 NUDIX domain LFZ55_RS13690 PF07383 Protein of unknown function (DUF1496) LFZ55_RS13695 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain LFZ55_RS13695 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase LFZ55_RS13700 PF01131 DNA topoisomerase LFZ55_RS13700 PF01751 Toprim domain LFZ55_RS13705 PF02769 AIR synthase related protein, C-terminal domain LFZ55_RS13705 PF00586 AIR synthase related protein, N-terminal domain LFZ55_RS13715 PF00881 Nitroreductase family LFZ55_RS13725 PF01343 Peptidase family S49 LFZ55_RS13730 PF00710 Asparaginase, N-terminal LFZ55_RS13730 PF17763 Glutaminase/Asparaginase C-terminal domain LFZ55_RS13735 PF00857 Isochorismatase family LFZ55_RS13740 PF07023 Protein of unknown function (DUF1315) LFZ55_RS13745 PF01641 SelR domain LFZ55_RS13750 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain LFZ55_RS13750 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain LFZ55_RS13760 PF01263 Aldose 1-epimerase LFZ55_RS13765 PF00248 Aldo/keto reductase family LFZ55_RS13770 PF13186 Iron-sulfur cluster-binding domain LFZ55_RS13770 PF04055 Radical SAM superfamily LFZ55_RS13775 PF06629 MltA-interacting protein MipA LFZ55_RS13780 PF08298 PrkA AAA domain LFZ55_RS13780 PF06798 PrkA serine protein kinase C-terminal domain LFZ55_RS13785 PF04285 Protein of unknown function (DUF444) LFZ55_RS13795 PF17155 Gammaproteobacterial periplasmic sensor domain LFZ55_RS13795 PF00990 Diguanylate cyclase, GGDEF domain LFZ55_RS13800 PF04073 Aminoacyl-tRNA editing domain LFZ55_RS13810 PF04284 Protein of unknown function (DUF441) LFZ55_RS13815 PF02311 AraC-like ligand binding domain LFZ55_RS13815 PF12833 Helix-turn-helix domain LFZ55_RS13820 PF07690 Major Facilitator Superfamily LFZ55_RS13825 PF04343 Protein of unknown function, DUF488 LFZ55_RS13835 PF03891 Domain of unknown function (DUF333) LFZ55_RS13845 PF04226 Transglycosylase associated protein LFZ55_RS13860 PF08956 Domain of unknown function (DUF1869) LFZ55_RS13865 PF09313 Domain of unknown function (DUF1971) LFZ55_RS13875 PF01810 LysE type translocator LFZ55_RS13880 PF00497 Bacterial extracellular solute-binding proteins, family 3 LFZ55_RS13885 PF01817 Chorismate mutase type II LFZ55_RS13900 PF00376 MerR family regulatory protein LFZ55_RS13900 PF09278 MerR, DNA binding LFZ55_RS13910 PF13427 Domain of unknown function (DUF4111) LFZ55_RS13910 PF01909 Nucleotidyltransferase domain LFZ55_RS13920 PF09223 ZinT (YodA) periplasmic lipocalin-like zinc-recruitment LFZ55_RS13935 PF00924 Mechanosensitive ion channel LFZ55_RS13940 PF00005 ABC transporter LFZ55_RS13945 PF00005 ABC transporter LFZ55_RS13950 PF00528 Binding-protein-dependent transport system inner membrane component LFZ55_RS13950 PF12911 N-terminal TM domain of oligopeptide transport permease C LFZ55_RS13955 PF00528 Binding-protein-dependent transport system inner membrane component LFZ55_RS13960 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle LFZ55_RS13975 PF01292 Prokaryotic cytochrome b561 LFZ55_RS13985 PF00011 Hsp20/alpha crystallin family LFZ55_RS14005 PF06316 Enterobacterial Ail/Lom protein LFZ55_RS14020 PF00313 'Cold-shock' DNA-binding domain LFZ55_RS14025 PF00652 Ricin-type beta-trefoil lectin domain LFZ55_RS14030 PF06183 DinI-like family LFZ55_RS14035 PF02395 Immunoglobulin A1 protease LFZ55_RS14035 PF03797 Autotransporter beta-domain LFZ55_RS14045 PF04151 Bacterial pre-peptidase C-terminal domain LFZ55_RS14055 PF06291 Bor protein LFZ55_RS14060 PF01278 Omptin family LFZ55_RS14075 PF14496 C-terminal novel E3 ligase, LRR-interacting LFZ55_RS14075 PF12468 Type III secretion system leucine rich repeat protein LFZ55_RS14080 PF09003 Bacteriophage lambda integrase, Arm DNA-binding domain LFZ55_RS14080 PF00589 Phage integrase family LFZ55_RS14085 PF00180 Isocitrate/isopropylmalate dehydrogenase LFZ55_RS14090 PF00849 RNA pseudouridylate synthase LFZ55_RS14095 PF00293 NUDIX domain LFZ55_RS14105 PF04356 Protein of unknown function (DUF489) LFZ55_RS14110 PF00206 Lyase LFZ55_RS14110 PF08328 Adenylosuccinate lyase C-terminal LFZ55_RS14115 PF00072 Response regulator receiver domain LFZ55_RS14115 PF00486 Transcriptional regulatory protein, C terminal LFZ55_RS14120 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LFZ55_RS14120 PF08918 PhoQ Sensor LFZ55_RS14125 PF08007 Cupin superfamily protein LFZ55_RS14130 PF07687 Peptidase dimerisation domain LFZ55_RS14130 PF01546 Peptidase family M20/M25/M40 LFZ55_RS14140 PF00005 ABC transporter LFZ55_RS14140 PF08402 TOBE domain LFZ55_RS14145 PF00528 Binding-protein-dependent transport system inner membrane component LFZ55_RS14150 PF00528 Binding-protein-dependent transport system inner membrane component LFZ55_RS14155 PF13416 Bacterial extracellular solute-binding protein LFZ55_RS14160 PF02146 Sir2 family LFZ55_RS14165 PF00480 ROK family LFZ55_RS14170 PF02687 FtsX-like permease family LFZ55_RS14170 PF12704 MacB-like periplasmic core domain LFZ55_RS14175 PF00005 ABC transporter LFZ55_RS14180 PF02687 FtsX-like permease family LFZ55_RS14180 PF12704 MacB-like periplasmic core domain LFZ55_RS14185 PF00271 Helicase conserved C-terminal domain LFZ55_RS14185 PF03461 TRCF domain LFZ55_RS14185 PF17757 UvrB interaction domain LFZ55_RS14185 PF02559 CarD-like/TRCF domain LFZ55_RS14185 PF00270 DEAD/DEAH box helicase LFZ55_RS14190 PF17969 L,D-transpeptidase C-terminal domain LFZ55_RS14190 PF01476 LysM domain LFZ55_RS14190 PF03734 L,D-transpeptidase catalytic domain LFZ55_RS14195 PF07338 Protein of unknown function (DUF1471) LFZ55_RS14200 PF00440 Bacterial regulatory proteins, tetR family LFZ55_RS14205 PF05433 Glycine zipper 2TM domain LFZ55_RS14210 PF07992 Pyridine nucleotide-disulphide oxidoreductase LFZ55_RS14215 PF05728 Uncharacterised protein family (UPF0227) LFZ55_RS14220 PF00933 Glycosyl hydrolase family 3 N terminal domain LFZ55_RS14225 PF01636 Phosphotransferase enzyme family LFZ55_RS14230 PF13036 Peptidoglycan-synthase activator LpoB LFZ55_RS14235 PF07233 Protein of unknown function (DUF1425) LFZ55_RS14240 PF01230 HIT domain LFZ55_RS14245 PF00593 TonB dependent receptor LFZ55_RS14245 PF07715 TonB-dependent Receptor Plug Domain LFZ55_RS14250 PF02378 Phosphotransferase system, EIIC LFZ55_RS14250 PF00367 phosphotransferase system, EIIB LFZ55_RS14255 PF01026 TatD related DNase LFZ55_RS14260 PF09115 DNA polymerase III, delta subunit, C terminal LFZ55_RS14265 PF02223 Thymidylate kinase LFZ55_RS14270 PF02618 YceG-like family LFZ55_RS14275 PF01063 Amino-transferase class IV LFZ55_RS14280 PF02801 Beta-ketoacyl synthase, C-terminal domain LFZ55_RS14280 PF00109 Beta-ketoacyl synthase, N-terminal domain LFZ55_RS14285 PF00550 Phosphopantetheine attachment site LFZ55_RS14295 PF00698 Acyl transferase domain LFZ55_RS14300 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III LFZ55_RS14300 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal LFZ55_RS14305 PF02504 Fatty acid synthesis protein LFZ55_RS14310 PF01783 Ribosomal L32p protein family LFZ55_RS14315 PF02620 Large ribosomal RNA subunit accumulation protein YceD LFZ55_RS14320 PF02545 Maf-like protein LFZ55_RS14325 PF01479 S4 domain LFZ55_RS14325 PF00849 RNA pseudouridylate synthase LFZ55_RS14335 PF00575 S1 RNA binding domain LFZ55_RS14335 PF10150 Ribonuclease E/G family LFZ55_RS14335 PF12111 Polyribonucleotide phosphorylase C terminal LFZ55_RS14345 PF00669 Bacterial flagellin N-terminal helical region LFZ55_RS14350 PF00460 Flagella basal body rod protein LFZ55_RS14350 PF06429 Flagellar basal body rod FlgEFG protein C-terminal LFZ55_RS14355 PF10135 Rod binding protein LFZ55_RS14355 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase LFZ55_RS14360 PF02119 Flagellar P-ring protein LFZ55_RS14365 PF02107 Flagellar L-ring protein LFZ55_RS14370 PF00460 Flagella basal body rod protein LFZ55_RS14370 PF06429 Flagellar basal body rod FlgEFG protein C-terminal LFZ55_RS14375 PF00460 Flagella basal body rod protein LFZ55_RS14375 PF06429 Flagellar basal body rod FlgEFG protein C-terminal LFZ55_RS14380 PF07559 Flagellar basal body protein FlaE LFZ55_RS14380 PF00460 Flagella basal body rod protein LFZ55_RS14380 PF06429 Flagellar basal body rod FlgEFG protein C-terminal LFZ55_RS14385 PF13860 FlgD Ig-like domain LFZ55_RS14385 PF13861 FlgD Tudor-like domain LFZ55_RS14385 PF03963 Flagellar hook capping protein - N-terminal region LFZ55_RS14390 PF00460 Flagella basal body rod protein LFZ55_RS14390 PF06429 Flagellar basal body rod FlgEFG protein C-terminal LFZ55_RS14395 PF00460 Flagella basal body rod protein LFZ55_RS14405 PF13144 Chaperone for flagella basal body P-ring formation LFZ55_RS14410 PF04316 Anti-sigma-28 factor, FlgM LFZ55_RS14415 PF05130 FlgN protein LFZ55_RS14420 PF03023 Lipid II flippase MurJ LFZ55_RS14425 PF01408 Oxidoreductase family, NAD-binding Rossmann fold LFZ55_RS14430 PF04337 Protein of unknown function, DUF480 LFZ55_RS14435 PF13302 Acetyltransferase (GNAT) domain LFZ55_RS14440 PF07690 Major Facilitator Superfamily LFZ55_RS14445 PF04399 Glutaredoxin 2, C terminal domain LFZ55_RS14445 PF13417 Glutathione S-transferase, N-terminal domain LFZ55_RS14450 PF07273 Protein of unknown function (DUF1439) LFZ55_RS14455 PF01979 Amidohydrolase family LFZ55_RS14460 PF06183 DinI-like family LFZ55_RS14465 PF13991 BssS protein family LFZ55_RS14470 PF01266 FAD dependent oxidoreductase LFZ55_RS14475 PF10968 Protein of unknown function (DUF2770) LFZ55_RS14480 PF01292 Prokaryotic cytochrome b561 LFZ55_RS14485 PF04264 YceI-like domain LFZ55_RS14490 PF17773 UPF0176 acylphosphatase like domain LFZ55_RS14490 PF12368 Rhodanase C-terminal LFZ55_RS14490 PF00581 Rhodanese-like domain LFZ55_RS14495 PF03279 Bacterial lipid A biosynthesis acyltransferase LFZ55_RS14505 PF07690 Major Facilitator Superfamily LFZ55_RS14510 PF13984 MsyB protein LFZ55_RS14515 PF07119 Protein of unknown function (DUF1375) LFZ55_RS14520 PF00535 Glycosyl transferase family 2 LFZ55_RS14525 PF04349 Periplasmic glucan biosynthesis protein, MdoG LFZ55_RS14530 PF01757 Acyltransferase family LFZ55_RS14535 PF13091 PLD-like domain LFZ55_RS14540 PF01661 Macro domain LFZ55_RS14550 PF10610 Thin aggregative fimbriae synthesis protein LFZ55_RS14555 PF07012 Curlin associated repeat LFZ55_RS14560 PF07012 Curlin associated repeat LFZ55_RS14565 PF00196 Bacterial regulatory proteins, luxR family LFZ55_RS14570 PF10627 Curli assembly protein CsgE LFZ55_RS14575 PF10614 Type VIII secretion system (T8SS), CsgF protein LFZ55_RS14580 PF03783 Curli production assembly/transport component CsgG LFZ55_RS14585 PF06496 Protein of unknown function (DUF1097) LFZ55_RS14590 PF02613 Nitrate reductase delta subunit LFZ55_RS14595 PF02811 PHP domain LFZ55_RS14600 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain LFZ55_RS14625 PF13356 Arm DNA-binding domain LFZ55_RS14625 PF00589 Phage integrase family LFZ55_RS14740 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LFZ55_RS14740 PF03466 LysR substrate binding domain LFZ55_RS14750 PF03480 Bacterial extracellular solute-binding protein, family 7 LFZ55_RS14780 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) LFZ55_RS14780 PF02403 Seryl-tRNA synthetase N-terminal domain LFZ55_RS14790 PF00764 Arginosuccinate synthase LFZ55_RS14795 PF13193 AMP-binding enzyme C-terminal domain LFZ55_RS14795 PF00668 Condensation domain LFZ55_RS14795 PF00550 Phosphopantetheine attachment site LFZ55_RS14795 PF00501 AMP-binding enzyme LFZ55_RS14795 PF00975 Thioesterase domain LFZ55_RS14800 PF00106 short chain dehydrogenase LFZ55_RS14805 PF00501 AMP-binding enzyme LFZ55_RS14805 PF13193 AMP-binding enzyme C-terminal domain LFZ55_RS14805 PF00668 Condensation domain LFZ55_RS14805 PF00550 Phosphopantetheine attachment site LFZ55_RS14805 PF00975 Thioesterase domain LFZ55_RS14810 PF03621 MbtH-like protein LFZ55_RS14830 PF02894 Oxidoreductase family, C-terminal alpha/beta domain LFZ55_RS14830 PF01408 Oxidoreductase family, NAD-binding Rossmann fold LFZ55_RS14835 PF07690 Major Facilitator Superfamily LFZ55_RS14840 PF06178 Oligogalacturonate-specific porin protein (KdgM) LFZ55_RS14845 PF01344 Kelch motif LFZ55_RS14850 PF04131 Putative N-acetylmannosamine-6-phosphate epimerase LFZ55_RS14855 PF00474 Sodium:solute symporter family LFZ55_RS14860 PF01380 SIS domain LFZ55_RS14860 PF01418 Helix-turn-helix domain, rpiR family LFZ55_RS14870 PF12468 Type III secretion system leucine rich repeat protein LFZ55_RS14870 PF14496 C-terminal novel E3 ligase, LRR-interacting LFZ55_RS14875 PF12468 Type III secretion system leucine rich repeat protein LFZ55_RS14875 PF14496 C-terminal novel E3 ligase, LRR-interacting LFZ55_RS14880 PF00474 Sodium:solute symporter family LFZ55_RS14890 PF00171 Aldehyde dehydrogenase family LFZ55_RS14890 PF01619 Proline dehydrogenase LFZ55_RS14890 PF18327 Proline utilization A proline dehydrogenase N-terminal domain LFZ55_RS14890 PF14850 DNA-binding domain of Proline dehydrogenase LFZ55_RS14900 PF00440 Bacterial regulatory proteins, tetR family LFZ55_RS14900 PF08362 YcdC-like protein, C-terminal region LFZ55_RS14905 PF10685 Stress-induced bacterial acidophilic repeat motif LFZ55_RS14910 PF03358 NADPH-dependent FMN reductase LFZ55_RS14915 PF13993 YccJ-like protein LFZ55_RS14920 PF00328 Histidine phosphatase superfamily (branch 2) LFZ55_RS14925 PF00578 AhpC/TSA family LFZ55_RS14930 PF13462 Thioredoxin LFZ55_RS14930 PF06965 Na+/H+ antiporter 1 LFZ55_RS14935 PF02683 Cytochrome C biogenesis protein transmembrane region LFZ55_RS14935 PF13098 Thioredoxin-like domain LFZ55_RS14935 PF11412 Disulphide bond corrector protein DsbC LFZ55_RS14950 PF01556 DnaJ C terminal domain LFZ55_RS14950 PF00226 DnaJ domain LFZ55_RS14965 PF12706 Beta-lactamase superfamily domain LFZ55_RS14975 PF07690 Major Facilitator Superfamily LFZ55_RS14980 PF03328 HpcH/HpaI aldolase/citrate lyase family LFZ55_RS14985 PF01557 Fumarylacetoacetate (FAA) hydrolase family LFZ55_RS14990 PF02962 5-carboxymethyl-2-hydroxymuconate isomerase LFZ55_RS14995 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase LFZ55_RS15000 PF00171 Aldehyde dehydrogenase family LFZ55_RS15005 PF01557 Fumarylacetoacetate (FAA) hydrolase family LFZ55_RS15010 PF01047 MarR family LFZ55_RS15015 PF11794 4-hydroxyphenylacetate 3-hydroxylase N terminal LFZ55_RS15015 PF03241 4-hydroxyphenylacetate 3-hydroxylase C terminal LFZ55_RS15020 PF01613 Flavin reductase like domain LFZ55_RS15025 PF00576 HIUase/Transthyretin family LFZ55_RS15030 PF00072 Response regulator receiver domain LFZ55_RS15030 PF00486 Transcriptional regulatory protein, C terminal LFZ55_RS15035 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LFZ55_RS15035 PF00512 His Kinase A (phospho-acceptor) domain LFZ55_RS15040 PF03577 Peptidase family C69 LFZ55_RS15050 PF13132 Domain of unknown function (DUF3950) LFZ55_RS15055 PF05925 Enterobacterial virulence protein IpgD LFZ55_RS15060 PF07824 Type III secretion chaperone domain LFZ55_RS15085 PF04575 Protein of unknown function (DUF560) LFZ55_RS15105 PF00419 Fimbrial protein LFZ55_RS15105 PF09222 Fimbrial adhesin F17-AG, lectin domain LFZ55_RS15110 PF00577 Outer membrane usher protein LFZ55_RS15110 PF13953 PapC C-terminal domain LFZ55_RS15110 PF13954 PapC N-terminal domain LFZ55_RS15115 PF02753 Pili assembly chaperone PapD, C-terminal domain LFZ55_RS15115 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain LFZ55_RS15120 PF16970 Type-1 fimbrial protein, A LFZ55_RS15140 PF06276 Ferric iron reductase FhuF-like transporter LFZ55_RS15140 PF04183 IucA / IucC family LFZ55_RS15150 PF04183 IucA / IucC family LFZ55_RS15150 PF06276 Ferric iron reductase FhuF-like transporter LFZ55_RS15155 PF13434 L-lysine 6-monooxygenase (NADPH-requiring) LFZ55_RS15160 PF07715 TonB-dependent Receptor Plug Domain LFZ55_RS15160 PF00593 TonB dependent receptor LFZ55_RS15175 PF01510 N-acetylmuramoyl-L-alanine amidase LFZ55_RS15185 PF00589 Phage integrase family LFZ55_RS15185 PF13356 Arm DNA-binding domain LFZ55_RS15275 PF04717 Type VI secretion system, phage-baseplate injector LFZ55_RS15285 PF00884 Sulfatase LFZ55_RS15330 PF13361 UvrD-like helicase C-terminal domain LFZ55_RS15330 PF00580 UvrD/REP helicase N-terminal domain LFZ55_RS15350 PF05717 IS66 Orf2 like protein LFZ55_RS15355 PF13005 zinc-finger binding domain of transposase IS66 LFZ55_RS15355 PF13817 IS66 C-terminal element LFZ55_RS15355 PF03050 Transposase IS66 family LFZ55_RS15355 PF13007 Transposase C of IS166 homeodomain LFZ55_RS15395 PF06006 Bacterial protein of unknown function (DUF905) LFZ55_RS15405 PF06067 Domain of unknown function (DUF932) LFZ55_RS15410 PF03230 Antirestriction protein LFZ55_RS15415 PF04002 RadC-like JAB domain LFZ55_RS15420 PF06174 Protein of unknown function (DUF987) LFZ55_RS15425 PF06154 CbeA_antitoxin, type IV, cytoskeleton bundling-enhancing factor A LFZ55_RS15430 PF06755 CbtA_toxin of type IV toxin-antitoxin system LFZ55_RS15455 PF00149 Calcineurin-like phosphoesterase LFZ55_RS15475 PF01027 Inhibitor of apoptosis-promoting Bax1 LFZ55_RS15480 PF04358 DsrC like protein LFZ55_RS15485 PF00708 Acylphosphatase LFZ55_RS15490 PF12833 Helix-turn-helix domain LFZ55_RS15495 PF01161 Phosphatidylethanolamine-binding protein LFZ55_RS15500 PF17785 PUA-like domain LFZ55_RS15500 PF10672 S-adenosylmethionine-dependent methyltransferase LFZ55_RS15505 PF08755 Hemimethylated DNA-binding protein YccV like LFZ55_RS15510 PF13380 CoA binding domain LFZ55_RS15515 PF09829 Uncharacterized protein conserved in bacteria (DUF2057) LFZ55_RS15520 PF02142 MGS-like domain LFZ55_RS15525 PF12462 DNA helicase IV / RNA helicase N terminal LFZ55_RS15525 PF00580 UvrD/REP helicase N-terminal domain LFZ55_RS15525 PF13361 UvrD-like helicase C-terminal domain LFZ55_RS15530 PF03733 Inner membrane component domain LFZ55_RS15535 PF12805 FUSC-like inner membrane protein yccS LFZ55_RS15540 PF04994 TfoX C-terminal domain LFZ55_RS15540 PF04993 TfoX N-terminal domain LFZ55_RS15545 PF03846 Cell division inhibitor SulA LFZ55_RS15550 PF00691 OmpA family LFZ55_RS15550 PF01389 OmpA-like transmembrane domain LFZ55_RS15555 PF06303 MatP N-terminal domain LFZ55_RS15555 PF17414 MatP C-terminal ribbon-helix-helix domain LFZ55_RS15560 PF13654 AAA domain LFZ55_RS15560 PF05362 Lon protease (S16) C-terminal proteolytic domain LFZ55_RS15565 PF07977 FabA-like domain LFZ55_RS15570 PF04957 Ribosome modulation factor LFZ55_RS15575 PF03886 ABC-type transport auxiliary lipoprotein component LFZ55_RS15580 PF02470 MlaD protein LFZ55_RS15585 PF04403 Paraquat-inducible protein A LFZ55_RS15590 PF12848 ABC transporter LFZ55_RS15590 PF16326 ABC transporter C-terminal domain LFZ55_RS15590 PF00005 ABC transporter LFZ55_RS15595 PF10672 S-adenosylmethionine-dependent methyltransferase LFZ55_RS15595 PF01170 Putative RNA methylase family UPF0020 LFZ55_RS15595 PF02926 THUMP domain LFZ55_RS15600 PF00111 2Fe-2S iron-sulfur cluster binding domain LFZ55_RS15600 PF03473 MOSC domain LFZ55_RS15600 PF03476 MOSC N-terminal beta barrel domain LFZ55_RS15605 PF07126 Cell-division protein ZapC LFZ55_RS15610 PF01180 Dihydroorotate dehydrogenase LFZ55_RS15615 PF11940 Domain of unknown function (DUF3458) Ig-like fold LFZ55_RS15615 PF17432 Domain of unknown function (DUF3458_C) ARM repeats LFZ55_RS15615 PF01433 Peptidase family M1 domain LFZ55_RS15620 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family LFZ55_RS15620 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain LFZ55_RS15625 PF01336 OB-fold nucleic acid binding domain LFZ55_RS15625 PF00152 tRNA synthetases class II (D, K and N) LFZ55_RS15630 PF00267 Gram-negative porin LFZ55_RS15635 PF00155 Aminotransferase class I and II LFZ55_RS15640 PF00753 Metallo-beta-lactamase superfamily LFZ55_RS15645 PF05951 Bacterial protein of unknown function (DUF882) LFZ55_RS15655 PF01471 Putative peptidoglycan binding domain LFZ55_RS15655 PF03734 L,D-transpeptidase catalytic domain LFZ55_RS15660 PF16330 MukB hinge domain LFZ55_RS15660 PF04310 MukB N-terminal LFZ55_RS15665 PF04288 MukE-like family LFZ55_RS15670 PF17192 MukF middle domain LFZ55_RS15670 PF17193 MukF C-terminal domain LFZ55_RS15670 PF03882 MukF winged-helix domain LFZ55_RS15675 PF13847 Methyltransferase domain LFZ55_RS15685 PF02698 DUF218 domain LFZ55_RS15690 PF01636 Phosphotransferase enzyme family LFZ55_RS15695 PF02348 Cytidylyltransferase LFZ55_RS15700 PF03966 Trm112p-like protein LFZ55_RS15705 PF06224 Winged helix DNA-binding domain LFZ55_RS15710 PF02606 Tetraacyldisaccharide-1-P 4'-kinase LFZ55_RS15715 PF00664 ABC transporter transmembrane region LFZ55_RS15715 PF00005 ABC transporter LFZ55_RS15720 PF00753 Metallo-beta-lactamase superfamily LFZ55_RS15720 PF03772 Competence protein LFZ55_RS15725 PF00216 Bacterial DNA-binding protein LFZ55_RS15730 PF00575 S1 RNA binding domain LFZ55_RS15735 PF02224 Cytidylate kinase LFZ55_RS15740 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) LFZ55_RS15745 PF00266 Aminotransferase class-V LFZ55_RS15750 PF04239 Protein of unknown function (DUF421) LFZ55_RS15755 PF02624 YcaO cyclodehydratase, ATP-ad Mg2+-binding LFZ55_RS15755 PF18381 YcaO cyclodehydratase C-terminal domain LFZ55_RS15760 PF01226 Formate/nitrite transporter LFZ55_RS15765 PF01228 Glycine radical LFZ55_RS15765 PF02901 Pyruvate formate lyase-like LFZ55_RS15770 PF11047 Salmonella outer protein D LFZ55_RS15780 PF04055 Radical SAM superfamily LFZ55_RS15785 PF13520 Amino acid permease LFZ55_RS15790 PF07690 Major Facilitator Superfamily LFZ55_RS15795 PF00857 Isochorismatase family LFZ55_RS15800 PF04976 DMSO reductase anchor subunit (DmsC) LFZ55_RS15805 PF12800 4Fe-4S binding domain LFZ55_RS15805 PF13247 4Fe-4S dicluster domain LFZ55_RS15810 PF01568 Molydopterin dinucleotide binding domain LFZ55_RS15810 PF00384 Molybdopterin oxidoreductase LFZ55_RS15810 PF04879 Molybdopterin oxidoreductase Fe4S4 domain LFZ55_RS15815 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) LFZ55_RS15815 PF02403 Seryl-tRNA synthetase N-terminal domain LFZ55_RS15825 PF12002 MgsA AAA+ ATPase C terminal LFZ55_RS15825 PF00004 ATPase family associated with various cellular activities (AAA) LFZ55_RS15825 PF16193 AAA C-terminal domain LFZ55_RS15830 PF03548 Outer membrane lipoprotein carrier protein LolA LFZ55_RS15835 PF13491 4TM region of DNA translocase FtsK/SpoIIIE LFZ55_RS15835 PF17854 FtsK alpha domain LFZ55_RS15835 PF01580 FtsK/SpoIIIE family LFZ55_RS15835 PF09397 Ftsk gamma domain LFZ55_RS15840 PF01037 Lrp/AsnC ligand binding domain LFZ55_RS15850 PF07992 Pyridine nucleotide-disulphide oxidoreductase LFZ55_RS15855 PF00664 ABC transporter transmembrane region LFZ55_RS15855 PF00005 ABC transporter LFZ55_RS15860 PF00005 ABC transporter LFZ55_RS15860 PF00664 ABC transporter transmembrane region LFZ55_RS15865 PF03588 Leucyl/phenylalanyl-tRNA protein transferase LFZ55_RS15875 PF01176 Translation initiation factor 1A / IF-1 LFZ55_RS15880 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LFZ55_RS15880 PF03466 LysR substrate binding domain LFZ55_RS15885 PF05726 Pirin C-terminal cupin domain LFZ55_RS15885 PF02678 Pirin LFZ55_RS15890 PF00857 Isochorismatase family LFZ55_RS15905 PF17871 AAA lid domain LFZ55_RS15905 PF07724 AAA domain (Cdc48 subfamily) LFZ55_RS15905 PF00004 ATPase family associated with various cellular activities (AAA) LFZ55_RS15905 PF02861 Clp amino terminal domain, pathogenicity island component LFZ55_RS15905 PF10431 C-terminal, D2-small domain, of ClpB protein LFZ55_RS15910 PF02617 ATP-dependent Clp protease adaptor protein ClpS LFZ55_RS15915 PF00313 'Cold-shock' DNA-binding domain LFZ55_RS15920 PF02687 FtsX-like permease family LFZ55_RS15920 PF12704 MacB-like periplasmic core domain LFZ55_RS15920 PF00005 ABC transporter LFZ55_RS15925 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion LFZ55_RS15930 PF04393 Protein of unknown function (DUF535) LFZ55_RS15935 PF11398 Protein of unknown function (DUF2813) LFZ55_RS15945 PF03956 Lysine exporter LysO LFZ55_RS15950 PF03063 Prismane/CO dehydrogenase family LFZ55_RS15955 PF00175 Oxidoreductase NAD-binding domain LFZ55_RS15955 PF00111 2Fe-2S iron-sulfur cluster binding domain LFZ55_RS15955 PF00970 Oxidoreductase FAD-binding domain LFZ55_RS15960 PF00205 Thiamine pyrophosphate enzyme, central domain LFZ55_RS15960 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain LFZ55_RS15960 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain LFZ55_RS15965 PF01212 Beta-eliminating lyase LFZ55_RS15970 PF11066 Protein of unknown function (DUF2867) LFZ55_RS15970 PF13460 NAD(P)H-binding LFZ55_RS15975 PF01370 NAD dependent epimerase/dehydratase family LFZ55_RS15980 PF01510 N-acetylmuramoyl-L-alanine amidase LFZ55_RS15985 PF01906 Putative heavy-metal-binding LFZ55_RS15990 PF12883 Protein of unknown function (DUF3828) LFZ55_RS15995 PF00005 ABC transporter LFZ55_RS16000 PF00497 Bacterial extracellular solute-binding proteins, family 3 LFZ55_RS16005 PF00528 Binding-protein-dependent transport system inner membrane component LFZ55_RS16010 PF00528 Binding-protein-dependent transport system inner membrane component LFZ55_RS16015 PF00497 Bacterial extracellular solute-binding proteins, family 3 LFZ55_RS16030 PF03611 PTS system sugar-specific permease component LFZ55_RS16035 PF05958 tRNA (Uracil-5-)-methyltransferase LFZ55_RS16040 PF10767 Protein of unknown function (DUF2593) LFZ55_RS16045 PF00528 Binding-protein-dependent transport system inner membrane component LFZ55_RS16050 PF00528 Binding-protein-dependent transport system inner membrane component LFZ55_RS16055 PF00005 ABC transporter LFZ55_RS16055 PF08402 TOBE domain LFZ55_RS16060 PF13416 Bacterial extracellular solute-binding protein LFZ55_RS16065 PF10722 Putative bacterial sensory transduction regulator LFZ55_RS16070 PF08443 RimK-like ATP-grasp domain LFZ55_RS16070 PF18030 RimK PreATP-grasp domain LFZ55_RS16075 PF00881 Nitroreductase family LFZ55_RS16080 PF07214 Protein of unknown function (DUF1418) LFZ55_RS16085 PF00462 Glutaredoxin LFZ55_RS16090 PF11045 Putative inner membrane protein of Enterobacteriaceae LFZ55_RS16100 PF02080 TrkA-C domain LFZ55_RS16100 PF06826 Predicted Permease Membrane Region LFZ55_RS16135 PF08400 Prophage tail fibre N-terminal LFZ55_RS16135 PF07484 Phage Tail Collar Domain LFZ55_RS16135 PF03335 Phage tail fibre repeat LFZ55_RS16245 PF05840 Bacteriophage replication gene A protein (GPA) LFZ55_RS16250 PF02086 D12 class N6 adenine-specific DNA methyltransferase LFZ55_RS16255 PF12961 Domain of unknown function (DUF3850) LFZ55_RS16280 PF06892 Phage regulatory protein CII (CP76) LFZ55_RS16290 PF16452 Bacteriophage CI repressor C-terminal domain LFZ55_RS16290 PF07022 Bacteriophage CI repressor helix-turn-helix domain LFZ55_RS16300 PF02899 Phage integrase, N-terminal SAM-like domain LFZ55_RS16300 PF00589 Phage integrase family LFZ55_RS16305 PF00440 Bacterial regulatory proteins, tetR family LFZ55_RS16310 PF07690 Major Facilitator Superfamily LFZ55_RS16320 PF07690 Major Facilitator Superfamily LFZ55_RS16325 PF01569 PAP2 superfamily LFZ55_RS16330 PF08220 DeoR-like helix-turn-helix domain LFZ55_RS16330 PF00455 DeoR C terminal sensor domain LFZ55_RS16335 PF07943 Penicillin-binding protein 5, C-terminal domain LFZ55_RS16335 PF00768 D-alanyl-D-alanine carboxypeptidase LFZ55_RS16340 PF13417 Glutathione S-transferase, N-terminal domain LFZ55_RS16340 PF00043 Glutathione S-transferase, C-terminal domain LFZ55_RS16345 PF07995 Glucose / Sorbosone dehydrogenase LFZ55_RS16350 PF10799 Biofilm formation protein (YliH/bssR) LFZ55_RS16355 PF00919 Uncharacterized protein family UPF0004 LFZ55_RS16355 PF04055 Radical SAM superfamily LFZ55_RS16355 PF18693 TRAM domain LFZ55_RS16360 PF12911 N-terminal TM domain of oligopeptide transport permease C LFZ55_RS16360 PF00528 Binding-protein-dependent transport system inner membrane component LFZ55_RS16365 PF00528 Binding-protein-dependent transport system inner membrane component LFZ55_RS16370 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle LFZ55_RS16375 PF08352 Oligopeptide/dipeptide transporter, C-terminal region LFZ55_RS16375 PF00005 ABC transporter LFZ55_RS16380 PF03453 MoeA N-terminal region (domain I and II) LFZ55_RS16380 PF03454 MoeA C-terminal region (domain IV) LFZ55_RS16380 PF00994 Probable molybdopterin binding domain LFZ55_RS16385 PF00899 ThiF family LFZ55_RS16395 PF04055 Radical SAM superfamily LFZ55_RS16400 PF02901 Pyruvate formate lyase-like LFZ55_RS16400 PF01228 Glycine radical LFZ55_RS16410 PF07350 Protein of unknown function (DUF1479) LFZ55_RS16415 PF00356 Bacterial regulatory proteins, lacI family LFZ55_RS16420 PF07690 Major Facilitator Superfamily LFZ55_RS16425 PF01055 Glycosyl hydrolases family 31 LFZ55_RS16425 PF17137 Domain of unknown function (DUF5110) LFZ55_RS16425 PF13802 Galactose mutarotase-like LFZ55_RS16425 PF16338 Domain of unknown function (DUF4968) LFZ55_RS16430 PF12848 ABC transporter LFZ55_RS16430 PF00005 ABC transporter LFZ55_RS16435 PF17969 L,D-transpeptidase C-terminal domain LFZ55_RS16435 PF03734 L,D-transpeptidase catalytic domain LFZ55_RS16440 PF03600 Citrate transporter LFZ55_RS16445 PF02742 Iron dependent repressor, metal binding and dimerisation domain LFZ55_RS16445 PF01325 Iron dependent repressor, N-terminal DNA binding domain LFZ55_RS16455 PF00884 Sulfatase LFZ55_RS16460 PF13505 Outer membrane protein beta-barrel domain LFZ55_RS16465 PF00892 EamA-like transporter family LFZ55_RS16470 PF00210 Ferritin-like domain LFZ55_RS16475 PF00497 Bacterial extracellular solute-binding proteins, family 3 LFZ55_RS16480 PF00528 Binding-protein-dependent transport system inner membrane component LFZ55_RS16485 PF00005 ABC transporter LFZ55_RS16490 PF00924 Mechanosensitive ion channel LFZ55_RS16495 PF05971 RNA methyltransferase LFZ55_RS16500 PF01258 Prokaryotic dksA/traR C4-type zinc finger LFZ55_RS16505 PF07338 Protein of unknown function (DUF1471) LFZ55_RS16510 PF02885 Glycosyl transferase family, helical bundle domain LFZ55_RS16515 PF06733 DEAD_2 LFZ55_RS16515 PF13307 Helicase C-terminal domain LFZ55_RS16520 PF00270 DEAD/DEAH box helicase LFZ55_RS16520 PF00271 Helicase conserved C-terminal domain LFZ55_RS16525 PF00440 Bacterial regulatory proteins, tetR family LFZ55_RS16525 PF09209 Tetracyclin repressor-like, C-terminal domain LFZ55_RS16530 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion LFZ55_RS16535 PF00005 ABC transporter LFZ55_RS16550 PF11076 Putative inner membrane protein YbhQ LFZ55_RS16555 PF03372 Endonuclease/Exonuclease/phosphatase family LFZ55_RS16560 PF13091 PLD-like domain LFZ55_RS16565 PF03706 Lysylphosphatidylglycerol synthase TM region LFZ55_RS16570 PF01027 Inhibitor of apoptosis-promoting Bax1 LFZ55_RS16575 PF02391 MoaE protein LFZ55_RS16580 PF02597 ThiS family LFZ55_RS16585 PF01967 MoaC family LFZ55_RS16590 PF00994 Probable molybdopterin binding domain LFZ55_RS16595 PF06463 Molybdenum Cofactor Synthesis C LFZ55_RS16595 PF04055 Radical SAM superfamily LFZ55_RS16600 PF01933 Uncharacterised protein family UPF0052 LFZ55_RS16605 PF12468 Type III secretion system leucine rich repeat protein LFZ55_RS16605 PF14496 C-terminal novel E3 ligase, LRR-interacting LFZ55_RS16610 PF12344 Ultra-violet resistance protein B LFZ55_RS16610 PF00271 Helicase conserved C-terminal domain LFZ55_RS16610 PF04851 Type III restriction enzyme, res subunit LFZ55_RS16610 PF17757 UvrB interaction domain LFZ55_RS16610 PF02151 UvrB/uvrC motif LFZ55_RS16625 PF08241 Methyltransferase domain LFZ55_RS16630 PF00155 Aminotransferase class I and II LFZ55_RS16635 PF04055 Radical SAM superfamily LFZ55_RS16635 PF06968 Biotin and Thiamin Synthesis associated domain LFZ55_RS16640 PF00202 Aminotransferase class-III LFZ55_RS16645 PF01161 Phosphatidylethanolamine-binding protein LFZ55_RS16650 PF00221 Aromatic amino acid lyase LFZ55_RS16655 PF01175 Urocanase Rossmann-like domain LFZ55_RS16655 PF17392 Urocanase C-terminal domain LFZ55_RS16655 PF17391 Urocanase N-terminal domain LFZ55_RS16660 PF07702 UTRA domain LFZ55_RS16660 PF00392 Bacterial regulatory proteins, gntR family LFZ55_RS16665 PF00491 Arginase family LFZ55_RS16670 PF01979 Amidohydrolase family LFZ55_RS16675 PF01095 Pectinesterase LFZ55_RS16685 PF10282 Lactonase, 7-bladed beta-propeller LFZ55_RS16695 PF03459 TOBE domain LFZ55_RS16695 PF00005 ABC transporter LFZ55_RS16700 PF00528 Binding-protein-dependent transport system inner membrane component LFZ55_RS16710 PF10766 Multidrug efflux pump-associated protein AcrZ LFZ55_RS16715 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LFZ55_RS16715 PF03459 TOBE domain LFZ55_RS16725 PF00005 ABC transporter LFZ55_RS16730 PF16363 GDP-mannose 4,6 dehydratase LFZ55_RS16735 PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain LFZ55_RS16735 PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain LFZ55_RS16740 PF10509 Galactokinase galactose-binding signature LFZ55_RS16740 PF08544 GHMP kinases C terminal LFZ55_RS16740 PF00288 GHMP kinases N terminal domain LFZ55_RS16745 PF01263 Aldose 1-epimerase LFZ55_RS16750 PF04794 YdjC-like protein LFZ55_RS16755 PF02056 Family 4 glycosyl hydrolase LFZ55_RS16755 PF11975 Family 4 glycosyl hydrolase C-terminal domain LFZ55_RS16760 PF07883 Cupin domain LFZ55_RS16760 PF12833 Helix-turn-helix domain LFZ55_RS16765 PF02378 Phosphotransferase system, EIIC LFZ55_RS16770 PF00300 Histidine phosphatase superfamily (branch 1) LFZ55_RS16775 PF00005 ABC transporter LFZ55_RS16780 PF01032 FecCD transport family LFZ55_RS16785 PF00793 DAHP synthetase I family LFZ55_RS16790 PF13985 YbgS-like protein LFZ55_RS16795 PF01545 Cation efflux family LFZ55_RS16800 PF04973 Nicotinamide mononucleotide transporter LFZ55_RS16805 PF02445 Quinolinate synthetase A protein LFZ55_RS16835 PF13174 Tetratricopeptide repeat LFZ55_RS16835 PF16331 TolA binding protein trimerisation LFZ55_RS16840 PF00691 OmpA family LFZ55_RS16845 PF07676 WD40-like Beta Propeller Repeat LFZ55_RS16845 PF04052 TolB amino-terminal domain LFZ55_RS16850 PF06519 TolA C-terminal LFZ55_RS16855 PF02472 Biopolymer transport protein ExbD/TolR LFZ55_RS16860 PF01618 MotA/TolQ/ExbB proton channel family LFZ55_RS16865 PF03061 Thioesterase superfamily LFZ55_RS16870 PF09600 Cyd operon protein YbgE (Cyd_oper_YbgE) LFZ55_RS16875 PF08173 Membrane bound YbgT-like protein LFZ55_RS16880 PF02322 Cytochrome bd terminal oxidase subunit II LFZ55_RS16885 PF01654 Cytochrome bd terminal oxidase subunit I LFZ55_RS16890 PF00392 Bacterial regulatory proteins, gntR family LFZ55_RS16890 PF07702 UTRA domain LFZ55_RS16895 PF00549 CoA-ligase LFZ55_RS16895 PF02629 CoA binding domain LFZ55_RS16900 PF00549 CoA-ligase LFZ55_RS16900 PF08442 ATP-grasp domain LFZ55_RS16905 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) LFZ55_RS16905 PF00364 Biotin-requiring enzyme LFZ55_RS16905 PF02817 e3 binding domain LFZ55_RS16910 PF00676 Dehydrogenase E1 component LFZ55_RS16910 PF02779 Transketolase, pyrimidine binding domain LFZ55_RS16910 PF16870 2-oxoglutarate dehydrogenase C-terminal LFZ55_RS16910 PF16078 2-oxoglutarate dehydrogenase N-terminus LFZ55_RS16915 PF13085 2Fe-2S iron-sulfur cluster binding domain LFZ55_RS16920 PF02910 Fumarate reductase flavoprotein C-term LFZ55_RS16920 PF00890 FAD binding domain LFZ55_RS16925 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit LFZ55_RS16930 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit LFZ55_RS16945 PF00285 Citrate synthase, C-terminal domain LFZ55_RS16950 PF05145 Transition state regulatory protein AbrB LFZ55_RS16955 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain LFZ55_RS16955 PF06827 Zinc finger found in FPG and IleRS LFZ55_RS16955 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain LFZ55_RS16980 PF00005 ABC transporter LFZ55_RS16985 PF01061 ABC-2 type transporter LFZ55_RS17000 PF03275 UDP-galactopyranose mutase LFZ55_RS17015 PF00589 Phage integrase family LFZ55_RS17025 PF03746 LamB/YcsF family LFZ55_RS17030 PF02626 Carboxyltransferase domain, subdomain A and B LFZ55_RS17035 PF02682 Carboxyltransferase domain, subdomain C and D LFZ55_RS17040 PF01784 NIF3 (NGG1p interacting factor 3) LFZ55_RS17050 PF00854 POT family LFZ55_RS17055 PF03441 FAD binding domain of DNA photolyase LFZ55_RS17055 PF00875 DNA photolyase LFZ55_RS17060 PF10725 Protein of unknown function (DUF2517) LFZ55_RS17065 PF09604 F subunit of K+-transporting ATPase (Potass_KdpF) LFZ55_RS17070 PF03814 Potassium-transporting ATPase A subunit LFZ55_RS17080 PF02669 K+-transporting ATPase, c chain LFZ55_RS17085 PF13493 Domain of unknown function (DUF4118) LFZ55_RS17085 PF02702 Osmosensitive K+ channel His kinase sensor domain LFZ55_RS17085 PF00512 His Kinase A (phospho-acceptor) domain LFZ55_RS17085 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LFZ55_RS17085 PF13492 GAF domain LFZ55_RS17090 PF00486 Transcriptional regulatory protein, C terminal LFZ55_RS17090 PF00072 Response regulator receiver domain LFZ55_RS17095 PF01276 Orn/Lys/Arg decarboxylase, major domain LFZ55_RS17095 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain LFZ55_RS17095 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain LFZ55_RS17100 PF13520 Amino acid permease LFZ55_RS17110 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain LFZ55_RS17110 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III LFZ55_RS17110 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I LFZ55_RS17110 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II LFZ55_RS17115 PF03925 SeqA protein C-terminal domain LFZ55_RS17115 PF17206 SeqA protein N-terminal domain LFZ55_RS17120 PF12697 Alpha/beta hydrolase family LFZ55_RS17125 PF01402 Ribbon-helix-helix protein, copG family LFZ55_RS17130 PF00258 Flavodoxin LFZ55_RS17135 PF01475 Ferric uptake regulator family LFZ55_RS17140 PF03466 LysR substrate binding domain LFZ55_RS17140 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LFZ55_RS17145 PF00890 FAD binding domain LFZ55_RS17145 PF14537 Cytochrome c3 LFZ55_RS17155 PF07690 Major Facilitator Superfamily LFZ55_RS17160 PF13982 YbfN-like lipoprotein LFZ55_RS17165 PF03573 outer membrane porin, OprD family LFZ55_RS17175 PF00749 tRNA synthetases class I (E and Q), catalytic domain LFZ55_RS17175 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain LFZ55_RS17180 PF00367 phosphotransferase system, EIIB LFZ55_RS17180 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 LFZ55_RS17180 PF02378 Phosphotransferase system, EIIC LFZ55_RS17185 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase LFZ55_RS17190 PF01979 Amidohydrolase family LFZ55_RS17195 PF00480 ROK family LFZ55_RS17195 PF01047 MarR family LFZ55_RS17200 PF13344 Haloacid dehalogenase-like hydrolase LFZ55_RS17210 PF13537 Glutamine amidotransferase domain LFZ55_RS17210 PF00733 Asparagine synthase LFZ55_RS17255 PF01494 FAD binding domain LFZ55_RS17260 PF00919 Uncharacterized protein family UPF0004 LFZ55_RS17260 PF01938 TRAM domain LFZ55_RS17260 PF04055 Radical SAM superfamily LFZ55_RS17265 PF02562 PhoH-like protein LFZ55_RS17270 PF02130 Uncharacterized protein family UPF0054 LFZ55_RS17275 PF00571 CBS domain LFZ55_RS17275 PF03471 Transporter associated domain LFZ55_RS17280 PF00795 Carbon-nitrogen hydrolase LFZ55_RS17290 PF00497 Bacterial extracellular solute-binding proteins, family 3 LFZ55_RS17295 PF00528 Binding-protein-dependent transport system inner membrane component LFZ55_RS17300 PF00528 Binding-protein-dependent transport system inner membrane component LFZ55_RS17305 PF00005 ABC transporter LFZ55_RS17310 PF01156 Inosine-uridine preferring nucleoside hydrolase LFZ55_RS17315 PF07295 Zinc-ribbon containing domain LFZ55_RS17325 PF08264 Anticodon-binding domain of tRNA LFZ55_RS17325 PF13603 Leucyl-tRNA synthetase, Domain 2 LFZ55_RS17325 PF00133 tRNA synthetases class I (I, L, M and V) LFZ55_RS17330 PF04390 Lipopolysaccharide-assembly LFZ55_RS17335 PF14840 Processivity clamp loader gamma complex DNA pol III C-term LFZ55_RS17335 PF06144 DNA polymerase III, delta subunit LFZ55_RS17340 PF01467 Cytidylyltransferase-like LFZ55_RS17345 PF00155 Aminotransferase class I and II LFZ55_RS17350 PF00300 Histidine phosphatase superfamily (branch 1) LFZ55_RS17360 PF02590 Predicted SPOUT methyltransferase LFZ55_RS17365 PF03717 Penicillin-binding Protein dimerisation domain LFZ55_RS17365 PF00905 Penicillin binding protein transpeptidase domain LFZ55_RS17370 PF01098 Cell cycle protein LFZ55_RS17375 PF05036 Sporulation related domain LFZ55_RS17375 PF03330 Lytic transglycolase LFZ55_RS17380 PF00768 D-alanyl-D-alanine carboxypeptidase LFZ55_RS17380 PF07943 Penicillin-binding protein 5, C-terminal domain LFZ55_RS17385 PF04359 Protein of unknown function (DUF493) LFZ55_RS17390 PF03099 Biotin/lipoate A/B protein ligase family LFZ55_RS17395 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LFZ55_RS17395 PF03466 LysR substrate binding domain LFZ55_RS17400 PF04055 Radical SAM superfamily LFZ55_RS17400 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family LFZ55_RS17405 PF02416 mttA/Hcf106 family LFZ55_RS17410 PF00795 Carbon-nitrogen hydrolase LFZ55_RS17415 PF02537 CrcB-like protein, Camphor Resistance (CrcB) LFZ55_RS17420 PF00313 'Cold-shock' DNA-binding domain LFZ55_RS17425 PF07017 Antimicrobial peptide resistance and lipid A acylation protein PagP LFZ55_RS17435 PF03606 C4-dicarboxylate anaerobic carrier LFZ55_RS17440 PF12431 Transcriptional regulator LFZ55_RS17440 PF00072 Response regulator receiver domain LFZ55_RS17445 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain LFZ55_RS17445 PF17203 Single cache domain 3 LFZ55_RS17445 PF00989 PAS fold LFZ55_RS17445 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LFZ55_RS17450 PF08218 Citrate lyase ligase C-terminal domain LFZ55_RS17455 PF06857 Malonate decarboxylase delta subunit (MdcD) LFZ55_RS17460 PF03328 HpcH/HpaI aldolase/citrate lyase family LFZ55_RS17465 PF04223 Citrate lyase, alpha subunit (CitF) LFZ55_RS17470 PF03802 Apo-citrate lyase phosphoribosyl-dephospho-CoA transferase LFZ55_RS17475 PF01874 ATP:dephospho-CoA triphosphoribosyl transferase LFZ55_RS17480 PF00939 Sodium:sulfate symporter transmembrane region LFZ55_RS17485 PF00445 Ribonuclease T2 family LFZ55_RS17495 PF01272 Transcription elongation factor, GreA/GreB, C-term LFZ55_RS17495 PF14760 Rnk N-terminus LFZ55_RS17500 PF08240 Alcohol dehydrogenase GroES-like domain LFZ55_RS17500 PF00107 Zinc-binding dehydrogenase LFZ55_RS17500 PF13823 Alcohol dehydrogenase GroES-associated LFZ55_RS17510 PF00582 Universal stress protein family LFZ55_RS17515 PF13192 Thioredoxin domain LFZ55_RS17515 PF07992 Pyridine nucleotide-disulphide oxidoreductase LFZ55_RS17520 PF10417 C-terminal domain of 1-Cys peroxiredoxin LFZ55_RS17520 PF00578 AhpC/TSA family LFZ55_RS17525 PF13098 Thioredoxin-like domain LFZ55_RS17535 PF03466 LysR substrate binding domain LFZ55_RS17535 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LFZ55_RS17540 PF01507 Phosphoadenosine phosphosulfate reductase family LFZ55_RS17540 PF11922 Domain of unknown function (DUF3440) LFZ55_RS17545 PF02195 ParB-like nuclease domain LFZ55_RS17550 PF00155 Aminotransferase class I and II LFZ55_RS17555 PF00465 Iron-containing alcohol dehydrogenase LFZ55_RS17560 PF04328 Selenoprotein, putative LFZ55_RS17565 PF13722 5TM C-terminal transporter carbon starvation CstA LFZ55_RS17565 PF02554 Carbon starvation protein CstA LFZ55_RS17570 PF03061 Thioesterase superfamily LFZ55_RS17580 PF00550 Phosphopantetheine attachment site LFZ55_RS17580 PF00857 Isochorismatase family LFZ55_RS17585 PF13193 AMP-binding enzyme C-terminal domain LFZ55_RS17585 PF00501 AMP-binding enzyme LFZ55_RS17590 PF00425 chorismate binding enzyme LFZ55_RS17595 PF01497 Periplasmic binding protein LFZ55_RS17600 PF05977 Transmembrane secretion effector LFZ55_RS17605 PF01032 FecCD transport family LFZ55_RS17610 PF01032 FecCD transport family LFZ55_RS17615 PF00005 ABC transporter LFZ55_RS17620 PF02706 Chain length determinant protein LFZ55_RS17625 PF13193 AMP-binding enzyme C-terminal domain LFZ55_RS17625 PF00668 Condensation domain LFZ55_RS17625 PF00550 Phosphopantetheine attachment site LFZ55_RS17625 PF00501 AMP-binding enzyme LFZ55_RS17625 PF00975 Thioesterase domain LFZ55_RS17630 PF03621 MbtH-like protein LFZ55_RS17635 PF11806 Domain of unknown function (DUF3327) LFZ55_RS17635 PF00756 Putative esterase LFZ55_RS17640 PF07715 TonB-dependent Receptor Plug Domain LFZ55_RS17640 PF00593 TonB dependent receptor LFZ55_RS17650 PF04107 Glutamate-cysteine ligase family 2(GCS2) LFZ55_RS17655 PF06643 Protein of unknown function (DUF1158) LFZ55_RS17660 PF12833 Helix-turn-helix domain LFZ55_RS17665 PF16295 Tetracyclin repressor-like, C-terminal domain LFZ55_RS17665 PF00440 Bacterial regulatory proteins, tetR family LFZ55_RS17670 PF04237 YjbR LFZ55_RS17675 PF00881 Nitroreductase family LFZ55_RS17680 PF00392 Bacterial regulatory proteins, gntR family LFZ55_RS17680 PF07702 UTRA domain LFZ55_RS17685 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit LFZ55_RS17690 PF02378 Phosphotransferase system, EIIC LFZ55_RS17695 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit LFZ55_RS17700 PF11471 Maltoporin periplasmic N-terminal extension LFZ55_RS17700 PF02264 LamB porin LFZ55_RS17705 PF00232 Glycosyl hydrolase family 1 LFZ55_RS17710 PF03797 Autotransporter beta-domain LFZ55_RS17710 PF00657 GDSL-like Lipase/Acylhydrolase LFZ55_RS17720 PF00924 Mechanosensitive ion channel LFZ55_RS17725 PF00324 Amino acid permease LFZ55_RS17735 PF04224 Protein of unknown function, DUF417 LFZ55_RS17740 PF07338 Protein of unknown function (DUF1471) LFZ55_RS17745 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain LFZ55_RS17745 PF07992 Pyridine nucleotide-disulphide oxidoreductase LFZ55_RS17750 PF12852 Cupin LFZ55_RS17750 PF12833 Helix-turn-helix domain LFZ55_RS17770 PF09092 Lyase, N terminal LFZ55_RS17770 PF02884 Polysaccharide lyase family 8, C-terminal beta-sandwich domain LFZ55_RS17770 PF09093 Lyase, catalytic LFZ55_RS17770 PF02278 Polysaccharide lyase family 8, super-sandwich domain LFZ55_RS17775 PF00589 Phage integrase family LFZ55_RS17785 PF00196 Bacterial regulatory proteins, luxR family LFZ55_RS17800 PF00196 Bacterial regulatory proteins, luxR family LFZ55_RS17800 PF00072 Response regulator receiver domain LFZ55_RS17805 PF00419 Fimbrial protein LFZ55_RS17810 PF00419 Fimbrial protein LFZ55_RS17815 PF00577 Outer membrane usher protein LFZ55_RS17815 PF13954 PapC N-terminal domain LFZ55_RS17815 PF13953 PapC C-terminal domain LFZ55_RS17820 PF02753 Pili assembly chaperone PapD, C-terminal domain LFZ55_RS17820 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain LFZ55_RS17830 PF00419 Fimbrial protein LFZ55_RS17840 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain LFZ55_RS17840 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain LFZ55_RS17850 PF09190 DALR domain LFZ55_RS17850 PF01406 tRNA synthetases class I (C) catalytic domain LFZ55_RS17855 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD LFZ55_RS17860 PF12850 Calcineurin-like phosphoesterase superfamily domain LFZ55_RS17870 PF00731 AIR carboxylase LFZ55_RS17875 PF02222 ATP-grasp domain LFZ55_RS17875 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain LFZ55_RS17885 PF00528 Binding-protein-dependent transport system inner membrane component LFZ55_RS17890 PF09383 NIL domain LFZ55_RS17890 PF00005 ABC transporter LFZ55_RS17895 PF03180 NLPA lipoprotein LFZ55_RS17910 PF00005 ABC transporter LFZ55_RS17915 PF13472 GDSL-like Lipase/Acylhydrolase family LFZ55_RS17920 PF00106 short chain dehydrogenase LFZ55_RS17925 PF00085 Thioredoxin LFZ55_RS17930 PF03649 Uncharacterised protein family (UPF0014) LFZ55_RS17935 PF00005 ABC transporter LFZ55_RS17940 PF01145 SPFH domain / Band 7 family LFZ55_RS17940 PF16200 C-terminal region of band_7 LFZ55_RS17945 PF01957 NfeD-like C-terminal, partner-binding LFZ55_RS17950 PF13411 MerR HTH family regulatory protein LFZ55_RS17955 PF00403 Heavy-metal-associated domain LFZ55_RS17960 PF01963 TraB family LFZ55_RS17965 PF04073 Aminoacyl-tRNA editing domain LFZ55_RS17970 PF00149 Calcineurin-like phosphoesterase LFZ55_RS17970 PF02872 5'-nucleotidase, C-terminal domain LFZ55_RS17975 PF07690 Major Facilitator Superfamily LFZ55_RS17980 PF02254 TrkA-N domain LFZ55_RS17980 PF00999 Sodium/hydrogen exchanger family LFZ55_RS17990 PF00294 pfkB family carbohydrate kinase LFZ55_RS17995 PF07859 alpha/beta hydrolase fold LFZ55_RS18000 PF00762 Ferrochelatase LFZ55_RS18005 PF05191 Adenylate kinase, active site lid LFZ55_RS18015 PF00183 Hsp90 protein LFZ55_RS18015 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LFZ55_RS18020 PF02132 RecR protein LFZ55_RS18020 PF13662 Toprim domain LFZ55_RS18025 PF02575 YbaB/EbfC DNA-binding family LFZ55_RS18030 PF12170 DNA polymerase III tau subunit V interacting with alpha LFZ55_RS18030 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding LFZ55_RS18030 PF12169 DNA polymerase III subunits gamma and tau domain III LFZ55_RS18035 PF00156 Phosphoribosyl transferase domain LFZ55_RS18045 PF04304 Protein of unknown function (DUF454) LFZ55_RS18050 PF07445 Primosomal replication protein priC LFZ55_RS18055 PF10689 Protein of unknown function (DUF2496) LFZ55_RS18060 PF04754 Putative transposase, YhgA-like LFZ55_RS18065 PF04754 Putative transposase, YhgA-like LFZ55_RS18070 PF12794 Mechanosensitive ion channel inner membrane domain 1 LFZ55_RS18070 PF12795 Mechanosensitive ion channel porin domain LFZ55_RS18070 PF00924 Mechanosensitive ion channel LFZ55_RS18075 PF00440 Bacterial regulatory proteins, tetR family LFZ55_RS18075 PF08361 MAATS-type transcriptional repressor, C-terminal region LFZ55_RS18080 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion LFZ55_RS18080 PF00529 HlyD membrane-fusion protein of T1SS LFZ55_RS18085 PF00873 AcrB/AcrD/AcrF family LFZ55_RS18090 PF10757 Biofilm formation regulator YbaJ LFZ55_RS18095 PF05321 Haemolysin expression modulating protein LFZ55_RS18100 PF14602 Hexapeptide repeat of succinyl-transferase LFZ55_RS18100 PF12464 Maltose acetyltransferase LFZ55_RS18105 PF10777 Inner membrane protein YlaC LFZ55_RS18110 PF00444 Ribosomal protein L36 LFZ55_RS18115 PF01197 Ribosomal protein L31 LFZ55_RS18120 PF12792 CSS motif domain associated with EAL LFZ55_RS18120 PF00563 EAL domain LFZ55_RS18130 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain LFZ55_RS18135 PF09619 Type III secretion system lipoprotein chaperone (YscW) LFZ55_RS18145 PF00909 Ammonium Transporter Family LFZ55_RS18150 PF00543 Nitrogen regulatory protein P-II LFZ55_RS18155 PF00005 ABC transporter LFZ55_RS18155 PF00664 ABC transporter transmembrane region LFZ55_RS18160 PF00664 ABC transporter transmembrane region LFZ55_RS18160 PF00005 ABC transporter LFZ55_RS18165 PF01037 Lrp/AsnC ligand binding domain LFZ55_RS18165 PF13404 AsnC-type helix-turn-helix domain LFZ55_RS18180 PF12793 Sugar transport-related sRNA regulator N-term LFZ55_RS18180 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle LFZ55_RS18185 PF06508 Queuosine biosynthesis protein QueC LFZ55_RS18200 PF13145 PPIC-type PPIASE domain LFZ55_RS18205 PF00216 Bacterial DNA-binding protein LFZ55_RS18210 PF02190 ATP-dependent protease La (LON) substrate-binding domain LFZ55_RS18210 PF00004 ATPase family associated with various cellular activities (AAA) LFZ55_RS18210 PF05362 Lon protease (S16) C-terminal proteolytic domain LFZ55_RS18215 PF10431 C-terminal, D2-small domain, of ClpB protein LFZ55_RS18215 PF06689 ClpX C4-type zinc finger LFZ55_RS18215 PF07724 AAA domain (Cdc48 subfamily) LFZ55_RS18225 PF00574 Clp protease LFZ55_RS18230 PF05698 Bacterial trigger factor protein (TF) C-terminus LFZ55_RS18230 PF05697 Bacterial trigger factor protein (TF) LFZ55_RS18230 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase LFZ55_RS18240 PF01722 BolA-like protein LFZ55_RS18245 PF03923 Uncharacterized lipoprotein LFZ55_RS18245 PF08139 Prokaryotic membrane lipoprotein lipid attachment site LFZ55_RS18250 PF07690 Major Facilitator Superfamily LFZ55_RS18255 PF06481 COX Aromatic Rich Motif LFZ55_RS18255 PF00116 Cytochrome C oxidase subunit II, periplasmic domain LFZ55_RS18260 PF00115 Cytochrome C and Quinol oxidase polypeptide I LFZ55_RS18265 PF00510 Cytochrome c oxidase subunit III LFZ55_RS18270 PF03626 Prokaryotic Cytochrome C oxidase subunit IV LFZ55_RS18275 PF01040 UbiA prenyltransferase family LFZ55_RS18290 PF07690 Major Facilitator Superfamily LFZ55_RS18295 PF04461 Protein of unknown function (DUF520) LFZ55_RS18300 PF08546 Ketopantoate reductase PanE/ApbA C terminal LFZ55_RS18300 PF02558 Ketopantoate reductase PanE/ApbA LFZ55_RS18305 PF01965 DJ-1/PfpI family LFZ55_RS18320 PF02568 Thiamine biosynthesis protein (ThiI) LFZ55_RS18320 PF02926 THUMP domain LFZ55_RS18325 PF02609 Exonuclease VII small subunit LFZ55_RS18330 PF00348 Polyprenyl synthetase LFZ55_RS18335 PF13292 1-deoxy-D-xylulose-5-phosphate synthase LFZ55_RS18335 PF02780 Transketolase, C-terminal domain LFZ55_RS18335 PF02779 Transketolase, pyrimidine binding domain LFZ55_RS18340 PF00248 Aldo/keto reductase family LFZ55_RS18345 PF04608 Phosphatidylglycerophosphatase A LFZ55_RS18350 PF02769 AIR synthase related protein, C-terminal domain LFZ55_RS18350 PF00586 AIR synthase related protein, N-terminal domain LFZ55_RS18355 PF01029 NusB family LFZ55_RS18360 PF00885 6,7-dimethyl-8-ribityllumazine synthase LFZ55_RS18365 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region LFZ55_RS18365 PF01872 RibD C-terminal domain LFZ55_RS18370 PF03477 ATP cone domain LFZ55_RS18375 PF11622 Protein of unknown function (DUF3251) LFZ55_RS18380 PF03502 Nucleoside-specific channel-forming protein, Tsx LFZ55_RS18385 PF01844 HNH endonuclease LFZ55_RS18390 PF07549 SecD/SecF GG Motif LFZ55_RS18390 PF02355 Protein export membrane protein LFZ55_RS18395 PF02355 Protein export membrane protein LFZ55_RS18395 PF13721 SecD export protein N-terminal TM region LFZ55_RS18395 PF07549 SecD/SecF GG Motif LFZ55_RS18400 PF02699 Preprotein translocase subunit LFZ55_RS18405 PF01702 Queuine tRNA-ribosyltransferase LFZ55_RS18415 PF02547 Queuosine biosynthesis protein LFZ55_RS18420 PF04336 Acyl carrier protein phosphodiesterase LFZ55_RS18425 PF10417 C-terminal domain of 1-Cys peroxiredoxin LFZ55_RS18425 PF00578 AhpC/TSA family LFZ55_RS18430 PF00128 Alpha amylase, catalytic domain LFZ55_RS18430 PF02903 Alpha amylase, N-terminal ig-like domain LFZ55_RS18435 PF00324 Amino acid permease LFZ55_RS18440 PF05525 Branched-chain amino acid transport protein LFZ55_RS18445 PF11808 Phosphate regulon sensor protein PhoR LFZ55_RS18445 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LFZ55_RS18445 PF00512 His Kinase A (phospho-acceptor) domain LFZ55_RS18445 PF00989 PAS fold LFZ55_RS18450 PF00072 Response regulator receiver domain LFZ55_RS18450 PF00486 Transcriptional regulatory protein, C terminal LFZ55_RS18455 PF12320 Type 5 capsule protein repressor C-terminal domain LFZ55_RS18455 PF00149 Calcineurin-like phosphoesterase LFZ55_RS18460 PF13476 AAA domain LFZ55_RS18465 PF07690 Major Facilitator Superfamily LFZ55_RS18470 PF00480 ROK family LFZ55_RS18475 PF04381 Putative exonuclease, RdgC LFZ55_RS18480 PF06865 Pyrimidine/purine nucleoside phosphorylase LFZ55_RS18485 PF07302 AroM protein LFZ55_RS18490 PF16362 YaiA protein LFZ55_RS18495 PF01202 Shikimate kinase LFZ55_RS18500 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 LFZ55_RS18505 PF14748 Pyrroline-5-carboxylate reductase dimerisation LFZ55_RS18505 PF03807 NADP oxidoreductase coenzyme F420-dependent LFZ55_RS18510 PF05230 MASE2 domain LFZ55_RS18510 PF00990 Diguanylate cyclase, GGDEF domain LFZ55_RS18515 PF07769 psiF repeat LFZ55_RS18520 PF10796 Sigma-S stabilisation anti-adaptor protein LFZ55_RS18525 PF07690 Major Facilitator Superfamily LFZ55_RS18535 PF07478 D-ala D-ala ligase C-terminus LFZ55_RS18535 PF01820 D-ala D-ala ligase N-terminus LFZ55_RS18540 PF10953 Protein of unknown function (DUF2754) LFZ55_RS18545 PF10954 Protein of unknown function (DUF2755) LFZ55_RS18550 PF07759 Protein of unknown function (DUF1615) LFZ55_RS18555 PF05992 SbmA/BacA-like family LFZ55_RS18560 PF00144 Beta-lactamase LFZ55_RS18565 PF15977 Winged helix-turn-helix DNA binding LFZ55_RS18575 PF00490 Delta-aminolevulinic acid dehydratase LFZ55_RS18580 PF13193 AMP-binding enzyme C-terminal domain LFZ55_RS18580 PF00501 AMP-binding enzyme LFZ55_RS18580 PF16177 Acetyl-coenzyme A synthetase N-terminus LFZ55_RS18585 PF03972 MmgE/PrpD family LFZ55_RS18590 PF00285 Citrate synthase, C-terminal domain LFZ55_RS18600 PF06506 Propionate catabolism activator LFZ55_RS18600 PF00158 Sigma-54 interaction domain LFZ55_RS18600 PF02954 Bacterial regulatory protein, Fis family LFZ55_RS18605 PF07338 Protein of unknown function (DUF1471) LFZ55_RS18610 PF01810 LysE type translocator LFZ55_RS18615 PF07715 TonB-dependent Receptor Plug Domain LFZ55_RS18615 PF00593 TonB dependent receptor LFZ55_RS18630 PF02322 Cytochrome bd terminal oxidase subunit II LFZ55_RS18635 PF01654 Cytochrome bd terminal oxidase subunit I LFZ55_RS18645 PF04851 Type III restriction enzyme, res subunit LFZ55_RS18645 PF08774 VRR-NUC domain LFZ55_RS18650 PF01555 DNA methylase LFZ55_RS18650 PF18273 Type III R-M EcoP15I C-terminal domain LFZ55_RS18655 PF07690 Major Facilitator Superfamily LFZ55_RS18675 PF13505 Outer membrane protein beta-barrel domain LFZ55_RS18690 PF12792 CSS motif domain associated with EAL LFZ55_RS18690 PF00563 EAL domain LFZ55_RS18705 PF16970 Type-1 fimbrial protein, A LFZ55_RS18710 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain LFZ55_RS18710 PF02753 Pili assembly chaperone PapD, C-terminal domain LFZ55_RS18715 PF13954 PapC N-terminal domain LFZ55_RS18715 PF13953 PapC C-terminal domain LFZ55_RS18715 PF00577 Outer membrane usher protein LFZ55_RS18725 PF02753 Pili assembly chaperone PapD, C-terminal domain LFZ55_RS18725 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain LFZ55_RS18730 PF00892 EamA-like transporter family LFZ55_RS18760 PF15977 Winged helix-turn-helix DNA binding LFZ55_RS18765 PF05932 Tir chaperone protein (CesT) family LFZ55_RS18770 PF07979 Intimin C-type lectin domain LFZ55_RS18770 PF02368 Bacterial Ig-like domain (group 2) LFZ55_RS18770 PF01476 LysM domain LFZ55_RS18770 PF11924 Inverse autotransporter, beta-domain LFZ55_RS18770 PF02369 Bacterial Ig-like domain (group 1) LFZ55_RS18795 PF00419 Fimbrial protein LFZ55_RS18800 PF13954 PapC N-terminal domain LFZ55_RS18800 PF13953 PapC C-terminal domain LFZ55_RS18800 PF00577 Outer membrane usher protein LFZ55_RS18805 PF02753 Pili assembly chaperone PapD, C-terminal domain LFZ55_RS18805 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain LFZ55_RS18820 PF04551 GcpE protein LFZ55_RS18825 PF01389 OmpA-like transmembrane domain LFZ55_RS18825 PF00691 OmpA family LFZ55_RS18830 PF01312 FlhB HrpN YscU SpaS Family LFZ55_RS18835 PF01311 Bacterial export proteins, family 1 LFZ55_RS18840 PF01313 Bacterial export proteins, family 3 LFZ55_RS18845 PF00813 FliP family LFZ55_RS18850 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term LFZ55_RS18860 PF18269 T3SS EscN ATPase C-terminal domain LFZ55_RS18860 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain LFZ55_RS18865 PF00771 FHIPEP family LFZ55_RS18875 PF07201 HrpJ-like domain LFZ55_RS18890 PF01514 Secretory protein of YscJ/FliF family LFZ55_RS18935 PF03958 Bacterial type II/III secretion system short domain LFZ55_RS18935 PF00263 Bacterial type II and III secretion system protein LFZ55_RS18990 PF00171 Aldehyde dehydrogenase family LFZ55_RS18995 PF01472 PUA domain LFZ55_RS18995 PF00696 Amino acid kinase family LFZ55_RS19000 PF00267 Gram-negative porin LFZ55_RS19005 PF07417 Sigma factor-binding transcriptional regulator Crl LFZ55_RS19010 PF06500 Alpha/beta hydrolase of unknown function (DUF1100) LFZ55_RS19015 PF00156 Phosphoribosyl transferase domain LFZ55_RS19020 PF07687 Peptidase dimerisation domain LFZ55_RS19020 PF01546 Peptidase family M20/M25/M40 LFZ55_RS19025 PF11798 IMS family HHH motif LFZ55_RS19025 PF00817 impB/mucB/samB family LFZ55_RS19025 PF11799 impB/mucB/samB family C-terminal domain LFZ55_RS19030 PF03734 L,D-transpeptidase catalytic domain LFZ55_RS19035 PF13230 Glutamine amidotransferases class-II LFZ55_RS19040 PF13580 SIS domain LFZ55_RS19045 PF02770 Acyl-CoA dehydrogenase, middle domain LFZ55_RS19045 PF00441 Acyl-CoA dehydrogenase, C-terminal domain LFZ55_RS19045 PF02771 Acyl-CoA dehydrogenase, N-terminal domain LFZ55_RS19045 PF09317 Domain of unknown function (DUF1974) LFZ55_RS19050 PF00795 Carbon-nitrogen hydrolase LFZ55_RS19070 PF13505 Outer membrane protein beta-barrel domain LFZ55_RS19080 PF00929 Exonuclease LFZ55_RS19085 PF00075 RNase H LFZ55_RS19090 PF08241 Methyltransferase domain LFZ55_RS19095 PF00753 Metallo-beta-lactamase superfamily LFZ55_RS19095 PF16123 Hydroxyacylglutathione hydrolase C-terminus LFZ55_RS19100 PF01464 Transglycosylase SLT domain LFZ55_RS19100 PF01476 LysM domain LFZ55_RS19105 PF08241 Methyltransferase domain LFZ55_RS19110 PF03372 Endonuclease/Exonuclease/phosphatase family LFZ55_RS19115 PF03466 LysR substrate binding domain LFZ55_RS19115 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LFZ55_RS19155 PF00005 ABC transporter LFZ55_RS19155 PF09383 NIL domain LFZ55_RS19160 PF00528 Binding-protein-dependent transport system inner membrane component LFZ55_RS19165 PF03180 NLPA lipoprotein LFZ55_RS19170 PF16358 RcsF lipoprotein LFZ55_RS19175 PF18389 TrmO C-terminal domain LFZ55_RS19175 PF01980 tRNA-methyltransferase O LFZ55_RS19180 PF03129 Anticodon binding domain LFZ55_RS19180 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) LFZ55_RS19180 PF04073 Aminoacyl-tRNA editing domain LFZ55_RS19185 PF04170 NlpE N-terminal domain LFZ55_RS19185 PF17185 NlpE C-terminal OB domain LFZ55_RS19190 PF00472 RF-1 domain LFZ55_RS19195 PF07152 YaeQ protein LFZ55_RS19200 PF06786 Uncharacterised protein family (UPF0253) LFZ55_RS19205 PF07073 Modulator of Rho-dependent transcription termination (ROF) LFZ55_RS19210 PF01171 PP-loop family LFZ55_RS19210 PF09179 TilS substrate binding domain LFZ55_RS19210 PF11734 TilS substrate C-terminal domain LFZ55_RS19215 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily LFZ55_RS19220 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain LFZ55_RS19220 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain LFZ55_RS19220 PF01276 Orn/Lys/Arg decarboxylase, major domain LFZ55_RS19230 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit LFZ55_RS19235 PF07733 Bacterial DNA polymerase III alpha NTPase domain LFZ55_RS19235 PF01336 OB-fold nucleic acid binding domain LFZ55_RS19235 PF02811 PHP domain LFZ55_RS19235 PF14579 Helix-hairpin-helix motif LFZ55_RS19235 PF17657 Bacterial DNA polymerase III alpha subunit finger domain LFZ55_RS19240 PF01351 Ribonuclease HII LFZ55_RS19245 PF02684 Lipid-A-disaccharide synthetase LFZ55_RS19250 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 LFZ55_RS19250 PF00132 Bacterial transferase hexapeptide (six repeats) LFZ55_RS19255 PF07977 FabA-like domain LFZ55_RS19260 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD LFZ55_RS19260 PF00132 Bacterial transferase hexapeptide (six repeats) LFZ55_RS19265 PF03938 Outer membrane protein (OmpH-like) LFZ55_RS19270 PF07244 Surface antigen variable number repeat LFZ55_RS19270 PF01103 Surface antigen LFZ55_RS19275 PF02163 Peptidase family M50 LFZ55_RS19275 PF17820 PDZ domain LFZ55_RS19285 PF01255 Putative undecaprenyl diphosphate synthase LFZ55_RS19295 PF13288 DXP reductoisomerase C-terminal domain LFZ55_RS19295 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase LFZ55_RS19295 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain LFZ55_RS19300 PF01765 Ribosome recycling factor LFZ55_RS19305 PF00696 Amino acid kinase family LFZ55_RS19310 PF00889 Elongation factor TS LFZ55_RS19320 PF00318 Ribosomal protein S2 LFZ55_RS19325 PF00557 Metallopeptidase family M24 LFZ55_RS19330 PF08335 GlnD PII-uridylyltransferase LFZ55_RS19330 PF01966 HD domain LFZ55_RS19330 PF01909 Nucleotidyltransferase domain LFZ55_RS19330 PF01842 ACT domain LFZ55_RS19335 PF00132 Bacterial transferase hexapeptide (six repeats) LFZ55_RS19335 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal LFZ55_RS19335 PF14602 Hexapeptide repeat of succinyl-transferase LFZ55_RS19340 PF00083 Sugar (and other) transporter LFZ55_RS19340 PF07690 Major Facilitator Superfamily LFZ55_RS19345 PF11944 Protein of unknown function (DUF3461) LFZ55_RS19350 PF05651 Putative sugar diacid recognition LFZ55_RS19350 PF17853 GGDEF-like domain LFZ55_RS19350 PF13556 PucR C-terminal helix-turn-helix domain LFZ55_RS19355 PF00595 PDZ domain LFZ55_RS19360 PF01966 HD domain LFZ55_RS19360 PF13286 Phosphohydrolase-associated domain LFZ55_RS19365 PF01048 Phosphorylase superfamily LFZ55_RS19370 PF01497 Periplasmic binding protein LFZ55_RS19375 PF03458 UPF0126 domain LFZ55_RS19380 PF01521 Iron-sulphur cluster biosynthesis LFZ55_RS19385 PF00654 Voltage gated chloride channel LFZ55_RS19390 PF00202 Aminotransferase class-III LFZ55_RS19395 PF01032 FecCD transport family LFZ55_RS19400 PF01497 Periplasmic binding protein LFZ55_RS19405 PF00005 ABC transporter LFZ55_RS19410 PF00593 TonB dependent receptor LFZ55_RS19410 PF07715 TonB-dependent Receptor Plug Domain LFZ55_RS19415 PF00905 Penicillin binding protein transpeptidase domain LFZ55_RS19415 PF14814 Bifunctional transglycosylase second domain LFZ55_RS19415 PF14812 Transmembrane domain of transglycosylase PBP1 at N-terminal LFZ55_RS19415 PF00912 Transglycosylase LFZ55_RS19420 PF00270 DEAD/DEAH box helicase LFZ55_RS19420 PF08482 ATP-dependent helicase C-terminal LFZ55_RS19420 PF04408 Helicase associated domain (HA2) LFZ55_RS19420 PF00271 Helicase conserved C-terminal domain LFZ55_RS19425 PF02834 LigT like Phosphoesterase LFZ55_RS19430 PF17746 SfsA N-terminal OB domain LFZ55_RS19430 PF03749 Sugar fermentation stimulation protein RE domain LFZ55_RS19435 PF01258 Prokaryotic dksA/traR C4-type zinc finger LFZ55_RS19440 PF00749 tRNA synthetases class I (E and Q), catalytic domain LFZ55_RS19445 PF01743 Poly A polymerase head domain LFZ55_RS19445 PF12626 Polymerase A arginine-rich C-terminus LFZ55_RS19445 PF12627 Probable RNA and SrmB- binding site of polymerase A LFZ55_RS19450 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) LFZ55_RS19455 PF02548 Ketopantoate hydroxymethyltransferase LFZ55_RS19460 PF02569 Pantoate-beta-alanine ligase LFZ55_RS19465 PF04754 Putative transposase, YhgA-like LFZ55_RS19475 PF02261 Aspartate decarboxylase LFZ55_RS19480 PF01522 Polysaccharide deacetylase LFZ55_RS19485 PF03610 PTS system fructose IIA component LFZ55_RS19490 PF01061 ABC-2 type transporter LFZ55_RS19495 PF00005 ABC transporter LFZ55_RS19500 PF00484 Carbonic anhydrase LFZ55_RS19505 PF00156 Phosphoribosyl transferase domain LFZ55_RS19510 PF01011 PQQ enzyme repeat LFZ55_RS19515 PF07731 Multicopper oxidase LFZ55_RS19515 PF00394 Multicopper oxidase LFZ55_RS19515 PF07732 Multicopper oxidase LFZ55_RS19520 PF09691 Type II secretion system pilotin lipoprotein (PulS_OutS) LFZ55_RS19525 PF17284 Spermidine synthase tetramerisation domain LFZ55_RS19530 PF02675 S-adenosylmethionine decarboxylase LFZ55_RS19535 PF00132 Bacterial transferase hexapeptide (six repeats) LFZ55_RS19535 PF12464 Maltose acetyltransferase LFZ55_RS19540 PF01306 LacY proton/sugar symporter LFZ55_RS19545 PF02836 Glycosyl hydrolases family 2, TIM barrel domain LFZ55_RS19545 PF00703 Glycosyl hydrolases family 2 LFZ55_RS19545 PF02837 Glycosyl hydrolases family 2, sugar binding domain LFZ55_RS19545 PF02929 Beta galactosidase small chain LFZ55_RS19545 PF16353 Domain of unknown function(DUF4981) LFZ55_RS19550 PF00356 Bacterial regulatory proteins, lacI family LFZ55_RS19555 PF06062 Uncharacterised protein family (UPF0231) LFZ55_RS19560 PF00330 Aconitase family (aconitate hydratase) LFZ55_RS19560 PF06434 Aconitate hydratase 2 N-terminus LFZ55_RS19560 PF11791 Aconitate B N-terminal domain LFZ55_RS19570 PF11737 Protein of unknown function (DUF3300) LFZ55_RS19585 PF07992 Pyridine nucleotide-disulphide oxidoreductase LFZ55_RS19585 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain LFZ55_RS19590 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) LFZ55_RS19590 PF00364 Biotin-requiring enzyme LFZ55_RS19590 PF02817 e3 binding domain LFZ55_RS19595 PF00456 Transketolase, thiamine diphosphate binding domain LFZ55_RS19595 PF17831 Pyruvate dehydrogenase E1 component middle domain LFZ55_RS19600 PF00392 Bacterial regulatory proteins, gntR family LFZ55_RS19600 PF07729 FCD domain LFZ55_RS19605 PF00324 Amino acid permease LFZ55_RS19615 PF04616 Glycosyl hydrolases family 43 LFZ55_RS19615 PF05270 Alpha-L-arabinofuranosidase B (ABFB) domain LFZ55_RS19620 PF17113 Regulatory signalling modulator protein AmpE LFZ55_RS19625 PF01510 N-acetylmuramoyl-L-alanine amidase LFZ55_RS19630 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain LFZ55_RS19630 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain LFZ55_RS19640 PF07963 Prokaryotic N-terminal methylation motif LFZ55_RS19645 PF00437 Type II/IV secretion system protein LFZ55_RS19645 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain LFZ55_RS19650 PF00482 Type II secretion system (T2SS), protein F LFZ55_RS19655 PF00478 IMP dehydrogenase / GMP reductase domain LFZ55_RS19660 PF01121 Dephospho-CoA kinase LFZ55_RS19665 PF07072 Cell division protein LFZ55_RS19670 PF03884 DNA gyrase inhibitor YacG LFZ55_RS19685 PF00293 NUDIX domain LFZ55_RS19690 PF02810 SEC-C motif LFZ55_RS19690 PF07516 SecA Wing and Scaffold domain LFZ55_RS19690 PF01043 SecA preprotein cross-linking domain LFZ55_RS19690 PF07517 SecA DEAD-like domain LFZ55_RS19695 PF06558 Secretion monitor precursor protein (SecM) LFZ55_RS19705 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase LFZ55_RS19710 PF12327 FtsZ family, C-terminal domain LFZ55_RS19710 PF00091 Tubulin/FtsZ family, GTPase domain LFZ55_RS19715 PF02491 SHS2 domain inserted in FTSA LFZ55_RS19720 PF08478 POTRA domain, FtsQ-type LFZ55_RS19720 PF03799 Cell division protein FtsQ LFZ55_RS19725 PF07478 D-ala D-ala ligase C-terminus LFZ55_RS19725 PF01820 D-ala D-ala ligase N-terminus LFZ55_RS19730 PF02875 Mur ligase family, glutamate ligase domain LFZ55_RS19730 PF08245 Mur ligase middle domain LFZ55_RS19730 PF01225 Mur ligase family, catalytic domain LFZ55_RS19735 PF03033 Glycosyltransferase family 28 N-terminal domain LFZ55_RS19735 PF04101 Glycosyltransferase family 28 C-terminal domain LFZ55_RS19740 PF01098 Cell cycle protein LFZ55_RS19745 PF08245 Mur ligase middle domain LFZ55_RS19745 PF02875 Mur ligase family, glutamate ligase domain LFZ55_RS19750 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 LFZ55_RS19750 PF00953 Glycosyl transferase family 4 LFZ55_RS19755 PF08245 Mur ligase middle domain LFZ55_RS19755 PF02875 Mur ligase family, glutamate ligase domain LFZ55_RS19755 PF01225 Mur ligase family, catalytic domain LFZ55_RS19760 PF01225 Mur ligase family, catalytic domain LFZ55_RS19760 PF02875 Mur ligase family, glutamate ligase domain LFZ55_RS19760 PF08245 Mur ligase middle domain LFZ55_RS19765 PF03717 Penicillin-binding Protein dimerisation domain LFZ55_RS19765 PF00905 Penicillin binding protein transpeptidase domain LFZ55_RS19775 PF04999 Cell division protein FtsL LFZ55_RS19780 PF01795 MraW methylase family LFZ55_RS19785 PF02381 MraZ protein, putative antitoxin-like LFZ55_RS19795 PF00356 Bacterial regulatory proteins, lacI family LFZ55_RS19795 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family LFZ55_RS19800 PF10369 Small subunit of acetolactate synthase LFZ55_RS19805 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain LFZ55_RS19805 PF00205 Thiamine pyrophosphate enzyme, central domain LFZ55_RS19805 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain LFZ55_RS19810 PF03466 LysR substrate binding domain LFZ55_RS19810 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LFZ55_RS19815 PF08054 Leucine operon leader peptide LFZ55_RS19820 PF00682 HMGL-like LFZ55_RS19820 PF08502 LeuA allosteric (dimerisation) domain LFZ55_RS19825 PF00180 Isocitrate/isopropylmalate dehydrogenase LFZ55_RS19830 PF00330 Aconitase family (aconitate hydratase) LFZ55_RS19835 PF00694 Aconitase C-terminal domain LFZ55_RS19840 PF07690 Major Facilitator Superfamily LFZ55_RS19850 PF12793 Sugar transport-related sRNA regulator N-term LFZ55_RS19850 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle LFZ55_RS19865 PF00528 Binding-protein-dependent transport system inner membrane component LFZ55_RS19870 PF00005 ABC transporter LFZ55_RS19875 PF09335 SNARE associated Golgi protein LFZ55_RS19880 PF12833 Helix-turn-helix domain LFZ55_RS19880 PF02311 AraC-like ligand binding domain LFZ55_RS19885 PF02782 FGGY family of carbohydrate kinases, C-terminal domain LFZ55_RS19890 PF11762 L-arabinose isomerase C-terminal domain LFZ55_RS19890 PF02610 L-arabinose isomerase LFZ55_RS19895 PF00596 Class II Aldolase and Adducin N-terminal domain LFZ55_RS19910 PF00136 DNA polymerase family B LFZ55_RS19910 PF03104 DNA polymerase family B, exonuclease domain LFZ55_RS19915 PF12137 RNA polymerase recycling family C-terminal LFZ55_RS19915 PF00176 SNF2 family N-terminal domain LFZ55_RS19915 PF18339 RapA N-terminal Tudor like domain 1 LFZ55_RS19915 PF18337 RapA N-terminal Tudor like domain LFZ55_RS19915 PF00271 Helicase conserved C-terminal domain LFZ55_RS19920 PF00849 RNA pseudouridylate synthase LFZ55_RS19925 PF05099 Tellurite resistance protein TerB LFZ55_RS19925 PF00226 DnaJ domain LFZ55_RS19930 PF04453 LPS transport system D LFZ55_RS19930 PF03968 OstA-like protein LFZ55_RS19935 PF00639 PPIC-type PPIASE domain LFZ55_RS19935 PF09312 SurA N-terminal domain LFZ55_RS19940 PF04166 Pyridoxal phosphate biosynthetic protein PdxA LFZ55_RS19945 PF00398 Ribosomal RNA adenine dimethylase LFZ55_RS19950 PF04379 ApaG domain LFZ55_RS19955 PF00149 Calcineurin-like phosphoesterase LFZ55_RS19960 PF00186 Dihydrofolate reductase LFZ55_RS19965 PF00999 Sodium/hydrogen exchanger family LFZ55_RS19965 PF02254 TrkA-N domain LFZ55_RS19970 PF02525 Flavodoxin-like fold LFZ55_RS19975 PF06004 Bacterial protein of unknown function (DUF903) LFZ55_RS19980 PF00083 Sugar (and other) transporter LFZ55_RS19990 PF01494 FAD binding domain LFZ55_RS19995 PF00766 Electron transfer flavoprotein FAD-binding domain LFZ55_RS19995 PF01012 Electron transfer flavoprotein domain LFZ55_RS20000 PF01012 Electron transfer flavoprotein domain LFZ55_RS20010 PF02028 BCCT, betaine/carnitine/choline family transporter LFZ55_RS20015 PF02770 Acyl-CoA dehydrogenase, middle domain LFZ55_RS20015 PF02771 Acyl-CoA dehydrogenase, N-terminal domain LFZ55_RS20015 PF00441 Acyl-CoA dehydrogenase, C-terminal domain LFZ55_RS20020 PF02515 CoA-transferase family III LFZ55_RS20030 PF00378 Enoyl-CoA hydratase/isomerase LFZ55_RS20035 PF00884 Sulfatase LFZ55_RS20050 PF07180 CaiF/GrlA transcriptional regulator LFZ55_RS20055 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain LFZ55_RS20055 PF02142 MGS-like domain LFZ55_RS20055 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain LFZ55_RS20060 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain LFZ55_RS20060 PF00117 Glutamine amidotransferase class-I LFZ55_RS20080 PF01113 Dihydrodipicolinate reductase, N-terminus LFZ55_RS20080 PF05173 Dihydrodipicolinate reductase, C-terminus LFZ55_RS20085 PF01156 Inosine-uridine preferring nucleoside hydrolase LFZ55_RS20090 PF02401 LytB protein LFZ55_RS20095 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase LFZ55_RS20100 PF01252 Signal peptidase (SPase) II LFZ55_RS20105 PF06827 Zinc finger found in FPG and IleRS LFZ55_RS20105 PF00133 tRNA synthetases class I (I, L, M and V) LFZ55_RS20105 PF08264 Anticodon-binding domain of tRNA LFZ55_RS20110 PF06574 FAD synthetase LFZ55_RS20110 PF01687 Riboflavin kinase LFZ55_RS20115 PF10837 Protein of unknown function (DUF2575) LFZ55_RS20120 PF01649 Ribosomal protein S20 LFZ55_RS20125 PF03466 LysR substrate binding domain LFZ55_RS20125 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LFZ55_RS20130 PF06965 Na+/H+ antiporter 1 LFZ55_RS20140 PF16385 Domain of unknown function LFZ55_RS20140 PF00884 Sulfatase LFZ55_RS20165 PF03466 LysR substrate binding domain LFZ55_RS20165 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LFZ55_RS20185 PF02753 Pili assembly chaperone PapD, C-terminal domain LFZ55_RS20185 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain LFZ55_RS20190 PF00419 Fimbrial protein LFZ55_RS20195 PF00419 Fimbrial protein LFZ55_RS20200 PF00419 Fimbrial protein LFZ55_RS20205 PF13953 PapC C-terminal domain LFZ55_RS20205 PF13954 PapC N-terminal domain LFZ55_RS20205 PF00577 Outer membrane usher protein LFZ55_RS20210 PF02753 Pili assembly chaperone PapD, C-terminal domain LFZ55_RS20210 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain LFZ55_RS20215 PF00419 Fimbrial protein LFZ55_RS20230 PF00704 Glycosyl hydrolases family 18 LFZ55_RS20250 PF03466 LysR substrate binding domain LFZ55_RS20250 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LFZ55_RS20255 PF00684 DnaJ central domain LFZ55_RS20255 PF01556 DnaJ C terminal domain LFZ55_RS20255 PF00226 DnaJ domain LFZ55_RS20260 PF00012 Hsp70 protein LFZ55_RS20270 PF10807 Protein of unknown function (DUF2541) LFZ55_RS20275 PF03981 Ubiquinol-cytochrome C chaperone LFZ55_RS20275 PF13099 Domain of unknown function (DUF3944) LFZ55_RS20280 PF01184 GPR1/FUN34/yaaH family LFZ55_RS20285 PF00994 Probable molybdopterin binding domain LFZ55_RS20290 PF04754 Putative transposase, YhgA-like LFZ55_RS20295 PF00923 Transaldolase/Fructose-6-phosphate aldolase LFZ55_RS20300 PF01235 Sodium:alanine symporter family LFZ55_RS20305 PF03883 Peroxide stress protein YaaA LFZ55_RS20310 PF14821 Threonine synthase N terminus LFZ55_RS20310 PF00291 Pyridoxal-phosphate dependent enzyme LFZ55_RS20315 PF00288 GHMP kinases N terminal domain LFZ55_RS20315 PF08544 GHMP kinases C terminal LFZ55_RS20320 PF00696 Amino acid kinase family LFZ55_RS20320 PF01842 ACT domain LFZ55_RS20320 PF03447 Homoserine dehydrogenase, NAD binding domain LFZ55_RS20320 PF00742 Homoserine dehydrogenase LFZ55_RS20320 PF13840 ACT domain LFZ55_RS20325 PF08254 Threonine leader peptide LFZ55_RS20330 PF00588 SpoU rRNA Methylase family LFZ55_RS20345 PF00486 Transcriptional regulatory protein, C terminal LFZ55_RS20345 PF00072 Response regulator receiver domain LFZ55_RS20365 PF05981 CreA protein LFZ55_RS20370 PF06445 GyrI-like small molecule binding domain LFZ55_RS20370 PF12833 Helix-turn-helix domain LFZ55_RS20375 PF00300 Histidine phosphatase superfamily (branch 1) LFZ55_RS20380 PF01931 Protein of unknown function DUF84 LFZ55_RS20385 PF01371 Trp repressor protein LFZ55_RS20390 PF14718 Soluble lytic murein transglycosylase L domain LFZ55_RS20390 PF01464 Transglycosylase SLT domain LFZ55_RS20400 PF12848 ABC transporter LFZ55_RS20400 PF00005 ABC transporter LFZ55_RS20405 PF13521 AAA domain LFZ55_RS20405 PF01381 Helix-turn-helix LFZ55_RS20410 PF18073 Rubredoxin metal binding domain LFZ55_RS20415 PF18429 Domain of unknown function (DUF5609) LFZ55_RS20425 PF10144 Bacterial virulence factor haemolysin LFZ55_RS20430 PF10437 Bacterial lipoate protein ligase C-terminus LFZ55_RS20430 PF03099 Biotin/lipoate A/B protein ligase family LFZ55_RS20435 PF01048 Phosphorylase superfamily LFZ55_RS20440 PF01676 Metalloenzyme superfamily LFZ55_RS20445 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain LFZ55_RS20445 PF00591 Glycosyl transferase family, a/b domain LFZ55_RS20445 PF02885 Glycosyl transferase family, helical bundle domain LFZ55_RS20450 PF01791 DeoC/LacD family aldolase LFZ55_RS20455 PF11230 Protein of unknown function (DUF3029) LFZ55_RS20460 PF04055 Radical SAM superfamily LFZ55_RS20465 PF01026 TatD related DNase LFZ55_RS20470 PF01734 Patatin-like phospholipase LFZ55_RS20475 PF07043 Protein of unknown function (DUF1328) LFZ55_RS20480 PF04972 BON domain LFZ55_RS20485 PF16658 Class II release factor RF3, C-terminal domain LFZ55_RS20485 PF03144 Elongation factor Tu domain 2 LFZ55_RS20485 PF00009 Elongation factor Tu GTP binding domain LFZ55_RS20490 PF13419 Haloacid dehalogenase-like hydrolase LFZ55_RS20495 PF00583 Acetyltransferase (GNAT) family LFZ55_RS20500 PF03603 DNA polymerase III psi subunit LFZ55_RS20505 PF05175 Methyltransferase small domain LFZ55_RS20505 PF08468 Methyltransferase small domain N-terminal LFZ55_RS20525 PF07256 Protein of unknown function (DUF1435) LFZ55_RS20530 PF00990 Diguanylate cyclase, GGDEF domain LFZ55_RS20535 PF06276 Ferric iron reductase FhuF-like transporter LFZ55_RS20535 PF11575 FhuF 2Fe-2S C-terminal domain LFZ55_RS20540 PF04073 Aminoacyl-tRNA editing domain LFZ55_RS20545 PF00196 Bacterial regulatory proteins, luxR family LFZ55_RS20550 PF00196 Bacterial regulatory proteins, luxR family LFZ55_RS20560 PF06738 Putative threonine/serine exporter LFZ55_RS20565 PF12821 Threonine/Serine exporter, ThrE LFZ55_RS20570 PF17948 DnaT DNA-binding domain LFZ55_RS20575 PF01695 IstB-like ATP binding protein LFZ55_RS20580 PF10696 Protein of unknown function (DUF2501) LFZ55_RS20585 PF00884 Sulfatase LFZ55_RS20590 PF00672 HAMP domain LFZ55_RS20590 PF02203 Tar ligand binding domain homologue LFZ55_RS20590 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain LFZ55_RS20595 PF02554 Carbon starvation protein CstA LFZ55_RS20595 PF13722 5TM C-terminal transporter carbon starvation CstA LFZ55_RS20600 PF04328 Selenoprotein, putative LFZ55_RS20605 PF07683 Cobalamin synthesis protein cobW C-terminal domain LFZ55_RS20605 PF02492 CobW/HypB/UreG, nucleotide-binding domain LFZ55_RS20610 PF12833 Helix-turn-helix domain LFZ55_RS20610 PF02311 AraC-like ligand binding domain LFZ55_RS20640 PF00171 Aldehyde dehydrogenase family LFZ55_RS20645 PF04754 Putative transposase, YhgA-like LFZ55_RS20650 PF07690 Major Facilitator Superfamily LFZ55_RS20655 PF04286 Protein of unknown function (DUF445) LFZ55_RS20660 PF06779 Uncharacterised MFS-type transporter YbfB LFZ55_RS20670 PF07670 Nucleoside recognition LFZ55_RS20675 PF07670 Nucleoside recognition LFZ55_RS20680 PF01979 Amidohydrolase family LFZ55_RS20685 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LFZ55_RS20685 PF03466 LysR substrate binding domain LFZ55_RS20690 PF01177 Asp/Glu/Hydantoin racemase LFZ55_RS20700 PF00579 tRNA synthetases class I (W and Y) LFZ55_RS20705 PF07729 FCD domain LFZ55_RS20705 PF00392 Bacterial regulatory proteins, gntR family LFZ55_RS20715 PF01738 Dienelactone hydrolase family LFZ55_RS20720 PF02537 CrcB-like protein, Camphor Resistance (CrcB) LFZ55_RS20720 PF03625 Domain of unknown function DUF302 LFZ55_RS20740 PF03830 PTS system sorbose subfamily IIB component LFZ55_RS20745 PF03609 PTS system sorbose-specific iic component LFZ55_RS20750 PF03613 PTS system mannose/fructose/sorbose family IID component LFZ55_RS20760 PF07470 Glycosyl Hydrolase Family 88 LFZ55_RS20775 PF02278 Polysaccharide lyase family 8, super-sandwich domain LFZ55_RS20775 PF02884 Polysaccharide lyase family 8, C-terminal beta-sandwich domain LFZ55_RS20775 PF08124 Polysaccharide lyase family 8, N terminal alpha-helical domain LFZ55_RS20800 PF09857 Putative toxin of bacterial toxin-antitoxin pair LFZ55_RS20805 PF13847 Methyltransferase domain LFZ55_RS20810 PF01709 Transcriptional regulator LFZ55_RS20835 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain LFZ55_RS20845 PF03796 DnaB-like helicase C terminal domain LFZ55_RS20845 PF00772 DnaB-like helicase N terminal domain LFZ55_RS20880 PF03212 Pertactin LFZ55_RS20880 PF03797 Autotransporter beta-domain LFZ55_RS20880 PF16168 Adhesin of bacterial autotransporter system, probable stalk LFZ55_RS20915 PF13609 Gram-negative porin LFZ55_RS21020 PF00145 C-5 cytosine-specific DNA methylase LFZ55_RS21075 PF00145 C-5 cytosine-specific DNA methylase LFZ55_RS21095 PF18818 Metallopeptidase superfamily domain LFZ55_RS21095 PF08401 Domain of unknown function (DUF1738) LFZ55_RS21105 PF13693 Winged helix-turn-helix DNA-binding LFZ55_RS21120 PF00480 ROK family LFZ55_RS21120 PF01047 MarR family LFZ55_RS21125 PF03009 Glycerophosphoryl diester phosphodiesterase family LFZ55_RS21130 PF00005 ABC transporter LFZ55_RS21130 PF08402 TOBE domain LFZ55_RS21135 PF00528 Binding-protein-dependent transport system inner membrane component LFZ55_RS21155 PF00589 Phage integrase family LFZ55_RS21165 PF08240 Alcohol dehydrogenase GroES-like domain LFZ55_RS21165 PF00107 Zinc-binding dehydrogenase LFZ55_RS21170 PF01202 Shikimate kinase LFZ55_RS21175 PF08240 Alcohol dehydrogenase GroES-like domain LFZ55_RS21175 PF00107 Zinc-binding dehydrogenase LFZ55_RS21180 PF00106 short chain dehydrogenase LFZ55_RS21185 PF02447 GntP family permease LFZ55_RS21190 PF00356 Bacterial regulatory proteins, lacI family LFZ55_RS21195 PF05872 Bacterial protein of unknown function (DUF853) LFZ55_RS21200 PF03739 Lipopolysaccharide export system permease LptF/LptG LFZ55_RS21205 PF03739 Lipopolysaccharide export system permease LptF/LptG LFZ55_RS21220 PF02789 Cytosol aminopeptidase family, N-terminal domain LFZ55_RS21220 PF00883 Cytosol aminopeptidase family, catalytic domain LFZ55_RS21225 PF04364 DNA polymerase III chi subunit, HolC LFZ55_RS21230 PF10458 Valyl tRNA synthetase tRNA binding arm LFZ55_RS21230 PF00133 tRNA synthetases class I (I, L, M and V) LFZ55_RS21230 PF08264 Anticodon-binding domain of tRNA LFZ55_RS21235 PF00583 Acetyltransferase (GNAT) family LFZ55_RS21240 PF06175 tRNA-(MS[2]IO[6]A)-hydroxylase (MiaE) LFZ55_RS21245 PF06877 Regulator of ribonuclease activity B LFZ55_RS21250 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain LFZ55_RS21250 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain LFZ55_RS21255 PF04074 YhcH/YjgK/YiaL LFZ55_RS21270 PF00696 Amino acid kinase family LFZ55_RS21275 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain LFZ55_RS21275 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain LFZ55_RS21280 PF03606 C4-dicarboxylate anaerobic carrier LFZ55_RS21285 PF01316 Arginine repressor, DNA binding domain LFZ55_RS21285 PF02863 Arginine repressor, C-terminal domain LFZ55_RS21295 PF08052 PyrBI operon leader peptide LFZ55_RS21300 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain LFZ55_RS21300 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain LFZ55_RS21305 PF01948 Aspartate carbamoyltransferase regulatory chain, allosteric domain LFZ55_RS21305 PF02748 Aspartate carbamoyltransferase regulatory chain, metal binding domain LFZ55_RS21310 PF01042 Endoribonuclease L-PSP LFZ55_RS21315 PF00690 Cation transporter/ATPase, N-terminus LFZ55_RS21315 PF00689 Cation transporting ATPase, C-terminus LFZ55_RS21320 PF00356 Bacterial regulatory proteins, lacI family LFZ55_RS21325 PF00367 phosphotransferase system, EIIB LFZ55_RS21325 PF02378 Phosphotransferase system, EIIC LFZ55_RS21330 PF00128 Alpha amylase, catalytic domain LFZ55_RS21330 PF11941 Domain of unknown function (DUF3459) LFZ55_RS21335 PF13597 Anaerobic ribonucleoside-triphosphate reductase LFZ55_RS21335 PF03477 ATP cone domain LFZ55_RS21345 PF05016 ParE toxin of type II toxin-antitoxin system, parDE LFZ55_RS21350 PF04221 RelB antitoxin LFZ55_RS21355 PF08279 HTH domain LFZ55_RS21355 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 LFZ55_RS21355 PF05043 Mga helix-turn-helix domain LFZ55_RS21355 PF00874 PRD domain LFZ55_RS21360 PF07071 KDGP aldolase LFZ55_RS21365 PF03841 L-seryl-tRNA selenium transferase LFZ55_RS21370 PF01979 Amidohydrolase family LFZ55_RS21400 PF07361 Cytochrome b562 LFZ55_RS21405 PF01523 Putative modulator of DNA gyrase LFZ55_RS21410 PF04751 Protein of unknown function (DUF615) LFZ55_RS21420 PF03412 Peptidase C39 family LFZ55_RS21420 PF00664 ABC transporter transmembrane region LFZ55_RS21420 PF00005 ABC transporter LFZ55_RS21450 PF02875 Mur ligase family, glutamate ligase domain LFZ55_RS21450 PF08245 Mur ligase middle domain LFZ55_RS21450 PF01225 Mur ligase family, catalytic domain LFZ55_RS21455 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain LFZ55_RS21460 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain LFZ55_RS21460 PF00672 HAMP domain LFZ55_RS21460 PF02203 Tar ligand binding domain homologue LFZ55_RS21470 PF13407 Periplasmic binding protein domain LFZ55_RS21475 PF00719 Inorganic pyrophosphatase LFZ55_RS21480 PF06094 Gamma-glutamyl cyclotransferase, AIG2-like LFZ55_RS21485 PF04357 TamB, inner membrane protein subunit of TAM complex LFZ55_RS21490 PF01103 Surface antigen LFZ55_RS21490 PF07244 Surface antigen variable number repeat LFZ55_RS21490 PF17243 POTRA domain TamA domain 1 LFZ55_RS21495 PF01625 Peptide methionine sulfoxide reductase LFZ55_RS21500 PF00571 CBS domain LFZ55_RS21500 PF01595 Cyclin M transmembrane N-terminal domain LFZ55_RS21500 PF03471 Transporter associated domain LFZ55_RS21505 PF06526 Protein of unknown function (DUF1107) LFZ55_RS21510 PF09695 Bacterial protein of unknown function (YtfJ_HI0045) LFZ55_RS21515 PF00459 Inositol monophosphatase family LFZ55_RS21525 PF00149 Calcineurin-like phosphoesterase LFZ55_RS21525 PF02872 5'-nucleotidase, C-terminal domain LFZ55_RS21530 PF01638 HxlR-like helix-turn-helix LFZ55_RS21535 PF05368 NmrA-like family LFZ55_RS21540 PF00892 EamA-like transporter family LFZ55_RS21545 PF04405 Domain of Unknown function (DUF542) LFZ55_RS21545 PF01814 Hemerythrin HHE cation binding domain LFZ55_RS21550 PF00324 Amino acid permease LFZ55_RS21555 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase LFZ55_RS21555 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase LFZ55_RS21560 PF08525 Opacity-associated protein A N-terminal motif LFZ55_RS21560 PF04225 Opacity-associated protein A LysM-like domain LFZ55_RS21570 PF03948 Ribosomal protein L9, C-terminal domain LFZ55_RS21570 PF01281 Ribosomal protein L9, N-terminal domain LFZ55_RS21575 PF01084 Ribosomal protein S18 LFZ55_RS21580 PF00436 Single-strand binding protein family LFZ55_RS21585 PF01250 Ribosomal protein S6 LFZ55_RS21600 PF07338 Protein of unknown function (DUF1471) LFZ55_RS21605 PF00596 Class II Aldolase and Adducin N-terminal domain LFZ55_RS21610 PF01261 Xylose isomerase-like TIM barrel LFZ55_RS21615 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family LFZ55_RS21620 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 LFZ55_RS21625 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit LFZ55_RS21630 PF03611 PTS system sugar-specific permease component LFZ55_RS21640 PF08220 DeoR-like helix-turn-helix domain LFZ55_RS21640 PF00455 DeoR C terminal sensor domain LFZ55_RS21645 PF00326 Prolyl oligopeptidase family LFZ55_RS21650 PF07338 Protein of unknown function (DUF1471) LFZ55_RS21655 PF07338 Protein of unknown function (DUF1471) LFZ55_RS21660 PF18158 Adaptive response protein AidB N-terminal domain LFZ55_RS21660 PF02770 Acyl-CoA dehydrogenase, middle domain LFZ55_RS21660 PF00441 Acyl-CoA dehydrogenase, C-terminal domain LFZ55_RS21665 PF03738 Glutathionylspermidine synthase preATP-grasp LFZ55_RS21670 PF10679 Protein of unknown function (DUF2491) LFZ55_RS21680 PF08032 RNA 2'-O ribose methyltransferase substrate binding LFZ55_RS21680 PF00588 SpoU rRNA Methylase family LFZ55_RS21685 PF08206 Ribonuclease B OB domain LFZ55_RS21685 PF00575 S1 RNA binding domain LFZ55_RS21685 PF00773 RNB domain LFZ55_RS21685 PF17876 Cold shock domain LFZ55_RS21685 PF08461 Ribonuclease R winged-helix domain LFZ55_RS21690 PF02082 Transcriptional regulator LFZ55_RS21700 PF00709 Adenylosuccinate synthetase LFZ55_RS21705 PF09838 Uncharacterized protein conserved in bacteria (DUF2065) LFZ55_RS21710 PF01145 SPFH domain / Band 7 family LFZ55_RS21715 PF01145 SPFH domain / Band 7 family LFZ55_RS21715 PF12221 Bacterial membrane protein N terminal LFZ55_RS21720 PF01926 50S ribosome-binding GTPase LFZ55_RS21720 PF13167 GTP-binding GTPase N-terminal LFZ55_RS21720 PF16360 GTP-binding GTPase Middle Region LFZ55_RS21725 PF17209 Hfq protein LFZ55_RS21735 PF01119 DNA mismatch repair protein, C-terminal domain LFZ55_RS21735 PF08676 MutL C terminal dimerisation domain LFZ55_RS21740 PF01520 N-acetylmuramoyl-L-alanine amidase LFZ55_RS21745 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE LFZ55_RS21750 PF03853 YjeF-related protein N-terminus LFZ55_RS21750 PF01256 Carbohydrate kinase LFZ55_RS21755 PF08331 Domain of unknown function (DUF1730) LFZ55_RS21775 PF00497 Bacterial extracellular solute-binding proteins, family 3 LFZ55_RS21780 PF00929 Exonuclease LFZ55_RS21785 PF03193 RsgA GTPase LFZ55_RS21790 PF02666 Phosphatidylserine decarboxylase LFZ55_RS21795 PF00924 Mechanosensitive ion channel LFZ55_RS21795 PF12795 Mechanosensitive ion channel porin domain LFZ55_RS21795 PF12794 Mechanosensitive ion channel inner membrane domain 1 LFZ55_RS21800 PF13520 Amino acid permease LFZ55_RS21805 PF00152 tRNA synthetases class II (D, K and N) LFZ55_RS21810 PF00890 FAD binding domain LFZ55_RS21810 PF02910 Fumarate reductase flavoprotein C-term LFZ55_RS21815 PF13085 2Fe-2S iron-sulfur cluster binding domain LFZ55_RS21815 PF13183 4Fe-4S dicluster domain LFZ55_RS21820 PF02300 Fumarate reductase subunit C LFZ55_RS21825 PF02313 Fumarate reductase subunit D LFZ55_RS21830 PF08212 Lipocalin-like domain LFZ55_RS21835 PF00893 Small Multidrug Resistance protein LFZ55_RS21840 PF00196 Bacterial regulatory proteins, luxR family LFZ55_RS21845 PF08085 Entericidin EcnA/B family LFZ55_RS21850 PF08085 Entericidin EcnA/B family LFZ55_RS21855 PF08207 Elongation factor P (EF-P) KOW-like domain LFZ55_RS21855 PF09285 Elongation factor P, C-terminal LFZ55_RS21855 PF01132 Elongation factor P (EF-P) OB domain LFZ55_RS21860 PF04055 Radical SAM superfamily LFZ55_RS21870 PF13698 Domain of unknown function (DUF4156) LFZ55_RS21875 PF00118 TCP-1/cpn60 chaperonin family LFZ55_RS21880 PF00166 Chaperonin 10 Kd subunit LFZ55_RS21885 PF13520 Amino acid permease LFZ55_RS21890 PF04186 FxsA cytoplasmic membrane protein LFZ55_RS21895 PF00206 Lyase LFZ55_RS21895 PF10415 Fumarase C C-terminus LFZ55_RS21900 PF03605 Anaerobic c4-dicarboxylate membrane transporter LFZ55_RS21905 PF03091 CutA1 divalent ion tolerance protein LFZ55_RS21910 PF02683 Cytochrome C biogenesis protein transmembrane region LFZ55_RS21910 PF11412 Disulphide bond corrector protein DsbC LFZ55_RS21930 PF06977 SdiA-regulated LFZ55_RS21940 PF03797 Autotransporter beta-domain LFZ55_RS21940 PF02395 Immunoglobulin A1 protease LFZ55_RS21960 PF02432 Fimbrial, major and minor subunit LFZ55_RS21970 PF17547 Family of unknown function (DUF5462) LFZ55_RS21975 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain LFZ55_RS21980 PF13954 PapC N-terminal domain LFZ55_RS21980 PF00577 Outer membrane usher protein LFZ55_RS21990 PF03333 Adhesin biosynthesis transcription regulatory protein LFZ55_RS22005 PF13276 HTH-like domain LFZ55_RS22005 PF13333 Integrase core domain LFZ55_RS22005 PF00665 Integrase core domain LFZ55_RS22015 PF12833 Helix-turn-helix domain LFZ55_RS22020 PF00196 Bacterial regulatory proteins, luxR family LFZ55_RS22025 PF00664 ABC transporter transmembrane region LFZ55_RS22025 PF00005 ABC transporter LFZ55_RS22060 PF06977 SdiA-regulated LFZ55_RS22075 PF00989 PAS fold LFZ55_RS22075 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain LFZ55_RS22075 PF17203 Single cache domain 3 LFZ55_RS22075 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LFZ55_RS22080 PF00072 Response regulator receiver domain LFZ55_RS22090 PF03605 Anaerobic c4-dicarboxylate membrane transporter LFZ55_RS22095 PF05683 Fumarase C-terminus LFZ55_RS22095 PF05681 Fumarate hydratase (Fumerase) LFZ55_RS22105 PF11975 Family 4 glycosyl hydrolase C-terminal domain LFZ55_RS22105 PF02056 Family 4 glycosyl hydrolase LFZ55_RS22110 PF12833 Helix-turn-helix domain LFZ55_RS22115 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain LFZ55_RS22115 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain LFZ55_RS22115 PF01276 Orn/Lys/Arg decarboxylase, major domain LFZ55_RS22120 PF12833 Helix-turn-helix domain LFZ55_RS22125 PF13520 Amino acid permease LFZ55_RS22130 PF08019 Phosphoethanolamine transferase EptA/EptB LFZ55_RS22130 PF00884 Sulfatase LFZ55_RS22135 PF00072 Response regulator receiver domain LFZ55_RS22135 PF00486 Transcriptional regulatory protein, C terminal LFZ55_RS22140 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LFZ55_RS22140 PF00512 His Kinase A (phospho-acceptor) domain LFZ55_RS22150 PF00083 Sugar (and other) transporter LFZ55_RS22150 PF08946 Osmosensory transporter coiled coil LFZ55_RS22155 PF08274 PhnA Zinc-Ribbon LFZ55_RS22155 PF03831 PhnA domain LFZ55_RS22160 PF06983 3-demethylubiquinone-9 3-methyltransferase LFZ55_RS22165 PF00005 ABC transporter LFZ55_RS22175 PF00528 Binding-protein-dependent transport system inner membrane component LFZ55_RS22180 PF06754 Phosphonate metabolism protein PhnG LFZ55_RS22185 PF05845 Bacterial phosphonate metabolism protein (PhnH) LFZ55_RS22190 PF05861 Bacterial phosphonate metabolism protein (PhnI) LFZ55_RS22195 PF06007 Phosphonate metabolism protein PhnJ LFZ55_RS22200 PF00005 ABC transporter LFZ55_RS22205 PF00005 ABC transporter LFZ55_RS22210 PF07969 Amidohydrolase family LFZ55_RS22220 PF00583 Acetyltransferase (GNAT) family LFZ55_RS22225 PF12706 Beta-lactamase superfamily domain LFZ55_RS22235 PF02321 Outer membrane efflux protein LFZ55_RS22245 PF08238 Sel1 repeat LFZ55_RS22250 PF00375 Sodium:dicarboxylate symporter family LFZ55_RS22260 PF03918 Cytochrome C biogenesis protein LFZ55_RS22265 PF01578 Cytochrome C assembly protein LFZ55_RS22265 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal LFZ55_RS22270 PF03916 Polysulphide reductase, NrfD LFZ55_RS22275 PF00037 4Fe-4S binding domain LFZ55_RS22275 PF13247 4Fe-4S dicluster domain LFZ55_RS22280 PF13435 Cytochrome c554 and c-prime LFZ55_RS22280 PF09699 Doubled CXXCH motif (Paired_CXXCH_1) LFZ55_RS22285 PF02335 Cytochrome c552 LFZ55_RS22295 PF00501 AMP-binding enzyme LFZ55_RS22295 PF16177 Acetyl-coenzyme A synthetase N-terminus LFZ55_RS22295 PF13193 AMP-binding enzyme C-terminal domain LFZ55_RS22300 PF04341 Protein of unknown function, DUF485 LFZ55_RS22305 PF00474 Sodium:solute symporter family LFZ55_RS22310 PF04172 LrgB-like family LFZ55_RS22315 PF03788 LrgA family LFZ55_RS22320 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LFZ55_RS22320 PF03466 LysR substrate binding domain LFZ55_RS22325 PF00999 Sodium/hydrogen exchanger family LFZ55_RS22335 PF00860 Permease family LFZ55_RS22345 PF09278 MerR, DNA binding LFZ55_RS22345 PF00376 MerR family regulatory protein LFZ55_RS22350 PF12833 Helix-turn-helix domain LFZ55_RS22355 PF00563 EAL domain LFZ55_RS22355 PF12792 CSS motif domain associated with EAL LFZ55_RS22360 PF15940 Family of unknown function LFZ55_RS22370 PF12833 Helix-turn-helix domain LFZ55_RS22375 PF00005 ABC transporter LFZ55_RS22375 PF00664 ABC transporter transmembrane region LFZ55_RS22405 PF00436 Single-strand binding protein family LFZ55_RS22415 PF17760 UvrA interaction domain LFZ55_RS22415 PF17755 UvrA DNA-binding domain LFZ55_RS22415 PF00005 ABC transporter LFZ55_RS22430 PF04237 YjbR LFZ55_RS22435 PF01894 Uncharacterised protein family UPF0047 LFZ55_RS22440 PF03767 HAD superfamily, subfamily IIIB (Acid phosphatase) LFZ55_RS22445 PF00155 Aminotransferase class I and II LFZ55_RS22450 PF01168 Alanine racemase, N-terminal domain LFZ55_RS22450 PF00842 Alanine racemase, C-terminal domain LFZ55_RS22455 PF00772 DnaB-like helicase N terminal domain LFZ55_RS22455 PF03796 DnaB-like helicase C terminal domain LFZ55_RS22460 PF08240 Alcohol dehydrogenase GroES-like domain LFZ55_RS22460 PF00107 Zinc-binding dehydrogenase LFZ55_RS22465 PF09583 Phage shock protein G (Phageshock_PspG) LFZ55_RS22470 PF01207 Dihydrouridine synthase (Dus) LFZ55_RS22485 PF01475 Ferric uptake regulator family LFZ55_RS22490 PF05532 CsbD-like LFZ55_RS22500 PF01554 MatE LFZ55_RS22505 PF01726 LexA DNA binding domain LFZ55_RS22505 PF00717 Peptidase S24-like LFZ55_RS22510 PF01219 Prokaryotic diacylglycerol kinase LFZ55_RS22515 PF01553 Acyltransferase LFZ55_RS22520 PF01040 UbiA prenyltransferase family LFZ55_RS22525 PF04345 Chorismate lyase LFZ55_RS22530 PF07148 Maltose operon periplasmic protein precursor (MalM) LFZ55_RS22535 PF02264 LamB porin LFZ55_RS22540 PF00005 ABC transporter LFZ55_RS22540 PF17912 MalK OB fold domain LFZ55_RS22545 PF01547 Bacterial extracellular solute-binding protein LFZ55_RS22550 PF14785 Maltose transport system permease protein MalF P2 domain LFZ55_RS22550 PF00528 Binding-protein-dependent transport system inner membrane component LFZ55_RS22555 PF00528 Binding-protein-dependent transport system inner membrane component LFZ55_RS22560 PF00083 Sugar (and other) transporter LFZ55_RS22565 PF06146 Phosphate-starvation-inducible E LFZ55_RS22570 PF06082 Exopolysaccharide biosynthesis protein YbjH LFZ55_RS22575 PF06251 Capsule biosynthesis GfcC LFZ55_RS22580 PF11102 Group 4 capsule polysaccharide lipoprotein gfcB, YjbF LFZ55_RS22585 PF11106 Exopolysaccharide production protein YjbE LFZ55_RS22590 PF00342 Phosphoglucose isomerase LFZ55_RS22595 PF01842 ACT domain LFZ55_RS22595 PF00696 Amino acid kinase family LFZ55_RS22605 PF11656 YjbD family (DUF3811) LFZ55_RS22610 PF00849 RNA pseudouridylate synthase LFZ55_RS22610 PF01479 S4 domain LFZ55_RS22615 PF09831 Uncharacterized protein conserved in bacteria (DUF2058) LFZ55_RS22625 PF03575 Peptidase family S51 LFZ55_RS22630 PF02690 Na+/Pi-cotransporter LFZ55_RS22635 PF02310 B12 binding domain LFZ55_RS22635 PF00809 Pterin binding enzyme LFZ55_RS22635 PF02574 Homocysteine S-methyltransferase LFZ55_RS22635 PF02607 B12 binding domain LFZ55_RS22635 PF02965 Vitamin B12 dependent methionine synthase, activation domain LFZ55_RS22645 PF09339 IclR helix-turn-helix domain LFZ55_RS22645 PF01614 Bacterial transcriptional regulator LFZ55_RS22655 PF06315 Isocitrate dehydrogenase kinase/phosphatase (AceK) LFZ55_RS22660 PF00463 Isocitrate lyase family LFZ55_RS22665 PF01274 Malate synthase LFZ55_RS22670 PF04204 Homoserine O-succinyltransferase LFZ55_RS22675 PF13673 Acetyltransferase (GNAT) domain LFZ55_RS22700 PF02142 MGS-like domain LFZ55_RS22700 PF01808 AICARFT/IMPCHase bienzyme LFZ55_RS22705 PF02843 Phosphoribosylglycinamide synthetase, C domain LFZ55_RS22705 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain LFZ55_RS22705 PF02844 Phosphoribosylglycinamide synthetase, N domain LFZ55_RS22710 PF00072 Response regulator receiver domain LFZ55_RS22710 PF02954 Bacterial regulatory protein, Fis family LFZ55_RS22710 PF00158 Sigma-54 interaction domain LFZ55_RS22715 PF00512 His Kinase A (phospho-acceptor) domain LFZ55_RS22715 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LFZ55_RS22720 PF13801 Heavy-metal resistance LFZ55_RS22725 PF07356 Protein of unknown function (DUF1481) LFZ55_RS22730 PF00216 Bacterial DNA-binding protein LFZ55_RS22735 PF04222 Protein of unknown function (DUF416) LFZ55_RS22740 PF04493 Endonuclease V LFZ55_RS22745 PF01208 Uroporphyrinogen decarboxylase (URO-D) LFZ55_RS22750 PF09297 NADH pyrophosphatase zinc ribbon domain LFZ55_RS22750 PF00293 NUDIX domain LFZ55_RS22755 PF04353 Regulator of RNA polymerase sigma(70) subunit, Rsd/AlgQ LFZ55_RS22760 PF01964 Radical SAM ThiC family LFZ55_RS22760 PF13667 ThiC-associated domain LFZ55_RS22765 PF02581 Thiamine monophosphate synthase LFZ55_RS22770 PF00899 ThiF family LFZ55_RS22775 PF02597 ThiS family LFZ55_RS22780 PF05690 Thiazole biosynthesis protein ThiG LFZ55_RS22785 PF04055 Radical SAM superfamily LFZ55_RS22785 PF06968 Biotin and Thiamin Synthesis associated domain LFZ55_RS22790 PF05000 RNA polymerase Rpb1, domain 4 LFZ55_RS22790 PF04983 RNA polymerase Rpb1, domain 3 LFZ55_RS22790 PF00623 RNA polymerase Rpb1, domain 2 LFZ55_RS22790 PF04997 RNA polymerase Rpb1, domain 1 LFZ55_RS22790 PF04998 RNA polymerase Rpb1, domain 5 LFZ55_RS22795 PF10385 RNA polymerase beta subunit external 1 domain LFZ55_RS22795 PF04560 RNA polymerase Rpb2, domain 7 LFZ55_RS22795 PF04561 RNA polymerase Rpb2, domain 2 LFZ55_RS22795 PF04565 RNA polymerase Rpb2, domain 3 LFZ55_RS22795 PF04563 RNA polymerase beta subunit LFZ55_RS22795 PF00562 RNA polymerase Rpb2, domain 6 LFZ55_RS22800 PF00542 Ribosomal protein L7/L12 C-terminal domain LFZ55_RS22800 PF16320 Ribosomal protein L7/L12 dimerisation domain LFZ55_RS22805 PF00466 Ribosomal protein L10 LFZ55_RS22815 PF00687 Ribosomal protein L1p/L10e family LFZ55_RS22820 PF03946 Ribosomal protein L11, N-terminal domain LFZ55_RS22820 PF00298 Ribosomal protein L11, RNA binding domain LFZ55_RS22825 PF02357 Transcription termination factor nusG LFZ55_RS22825 PF00467 KOW motif LFZ55_RS22830 PF00584 SecE/Sec61-gamma subunits of protein translocation complex LFZ55_RS22835 PF03143 Elongation factor Tu C-terminal domain LFZ55_RS22835 PF00009 Elongation factor Tu GTP binding domain LFZ55_RS22835 PF03144 Elongation factor Tu domain 2 LFZ55_RS22870 PF00485 Phosphoribulokinase / Uridine kinase family LFZ55_RS22875 PF08279 HTH domain LFZ55_RS22875 PF02237 Biotin protein ligase C terminal domain LFZ55_RS22875 PF03099 Biotin/lipoate A/B protein ligase family LFZ55_RS22880 PF01565 FAD binding domain LFZ55_RS22880 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain LFZ55_RS22910 PF01177 Asp/Glu/Hydantoin racemase LFZ55_RS22915 PF07715 TonB-dependent Receptor Plug Domain LFZ55_RS22915 PF00593 TonB dependent receptor LFZ55_RS22920 PF05958 tRNA (Uracil-5-)-methyltransferase LFZ55_RS22925 PF07226 Protein of unknown function (DUF1422) LFZ55_RS22930 PF00440 Bacterial regulatory proteins, tetR family LFZ55_RS22940 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain LFZ55_RS22940 PF07992 Pyridine nucleotide-disulphide oxidoreductase LFZ55_RS22945 PF03466 LysR substrate binding domain LFZ55_RS22945 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LFZ55_RS22955 PF14698 Argininosuccinate lyase C-terminal LFZ55_RS22955 PF00206 Lyase LFZ55_RS22960 PF00696 Amino acid kinase family LFZ55_RS22965 PF02774 Semialdehyde dehydrogenase, dimerisation domain LFZ55_RS22965 PF01118 Semialdehyde dehydrogenase, NAD binding domain LFZ55_RS22970 PF07687 Peptidase dimerisation domain LFZ55_RS22970 PF01546 Peptidase family M20/M25/M40 LFZ55_RS22975 PF00311 Phosphoenolpyruvate carboxylase LFZ55_RS22980 PF00884 Sulfatase LFZ55_RS22985 PF12833 Helix-turn-helix domain LFZ55_RS22990 PF00923 Transaldolase/Fructose-6-phosphate aldolase LFZ55_RS22995 PF00465 Iron-containing alcohol dehydrogenase LFZ55_RS23000 PF00141 Peroxidase LFZ55_RS23005 PF02219 Methylenetetrahydrofolate reductase LFZ55_RS23020 PF00696 Amino acid kinase family LFZ55_RS23020 PF03447 Homoserine dehydrogenase, NAD binding domain LFZ55_RS23020 PF00742 Homoserine dehydrogenase LFZ55_RS23025 PF01053 Cys/Met metabolism PLP-dependent enzyme LFZ55_RS23030 PF01340 Met Apo-repressor, MetJ LFZ55_RS23040 PF06178 Oligogalacturonate-specific porin protein (KdgM) LFZ55_RS23045 PF01197 Ribosomal protein L31 LFZ55_RS23050 PF00271 Helicase conserved C-terminal domain LFZ55_RS23050 PF18319 PriA DNA helicase Cys-rich region (CRR) domain LFZ55_RS23050 PF18074 Primosomal protein N C-terminal domain LFZ55_RS23050 PF17764 3′ DNA-binding domain (3′BD) LFZ55_RS23050 PF00270 DEAD/DEAH box helicase LFZ55_RS23055 PF00356 Bacterial regulatory proteins, lacI family LFZ55_RS23060 PF05036 Sporulation related domain LFZ55_RS23065 PF00227 Proteasome subunit LFZ55_RS23070 PF10431 C-terminal, D2-small domain, of ClpB protein LFZ55_RS23070 PF07724 AAA domain (Cdc48 subfamily) LFZ55_RS23070 PF00004 ATPase family associated with various cellular activities (AAA) LFZ55_RS23075 PF01040 UbiA prenyltransferase family LFZ55_RS23080 PF03737 Aldolase/RraA LFZ55_RS23085 PF06005 Cell division protein ZapB LFZ55_RS23090 PF00230 Major intrinsic protein LFZ55_RS23095 PF02782 FGGY family of carbohydrate kinases, C-terminal domain LFZ55_RS23095 PF00370 FGGY family of carbohydrate kinases, N-terminal domain LFZ55_RS23100 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded LFZ55_RS23105 PF00175 Oxidoreductase NAD-binding domain LFZ55_RS23105 PF00970 Oxidoreductase FAD-binding domain LFZ55_RS23110 PF05656 Protein of unknown function (DUF805) LFZ55_RS23115 PF07305 Protein of unknown function (DUF1454) LFZ55_RS23120 PF00121 Triosephosphate isomerase LFZ55_RS23125 PF00939 Sodium:sulfate symporter transmembrane region LFZ55_RS23135 PF02611 CDP-diacylglycerol pyrophosphatase LFZ55_RS23145 PF00365 Phosphofructokinase LFZ55_RS23150 PF16916 Dimerisation domain of Zinc Transporter LFZ55_RS23150 PF01545 Cation efflux family LFZ55_RS23155 PF07813 LTXXQ motif family protein LFZ55_RS23160 PF00486 Transcriptional regulatory protein, C terminal LFZ55_RS23160 PF00072 Response regulator receiver domain LFZ55_RS23165 PF16527 Two-component sensor protein CpxA, periplasmic domain LFZ55_RS23165 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LFZ55_RS23165 PF00512 His Kinase A (phospho-acceptor) domain LFZ55_RS23165 PF00672 HAMP domain LFZ55_RS23170 PF03475 3-alpha domain LFZ55_RS23170 PF03473 MOSC domain LFZ55_RS23175 PF02777 Iron/manganese superoxide dismutases, C-terminal domain LFZ55_RS23175 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain LFZ55_RS23180 PF06379 L-rhamnose-proton symport protein (RhaT) LFZ55_RS23185 PF12833 Helix-turn-helix domain LFZ55_RS23185 PF02311 AraC-like ligand binding domain LFZ55_RS23190 PF02311 AraC-like ligand binding domain LFZ55_RS23190 PF12833 Helix-turn-helix domain LFZ55_RS23200 PF02782 FGGY family of carbohydrate kinases, C-terminal domain LFZ55_RS23200 PF00370 FGGY family of carbohydrate kinases, N-terminal domain LFZ55_RS23205 PF06134 L-rhamnose isomerase (RhaA) LFZ55_RS23210 PF00596 Class II Aldolase and Adducin N-terminal domain LFZ55_RS23215 PF00465 Iron-containing alcohol dehydrogenase LFZ55_RS23220 PF05336 L-rhamnose mutarotase LFZ55_RS23230 PF03591 AzlC protein LFZ55_RS23240 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 LFZ55_RS23245 PF02378 Phosphotransferase system, EIIC LFZ55_RS23245 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit LFZ55_RS23250 PF05343 M42 glutamyl aminopeptidase LFZ55_RS23255 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 LFZ55_RS23255 PF08279 HTH domain LFZ55_RS23265 PF02634 FdhD/NarQ family LFZ55_RS23275 PF01568 Molydopterin dinucleotide binding domain LFZ55_RS23275 PF04879 Molybdopterin oxidoreductase Fe4S4 domain LFZ55_RS23275 PF00384 Molybdopterin oxidoreductase LFZ55_RS23280 PF00384 Molybdopterin oxidoreductase LFZ55_RS23280 PF01568 Molydopterin dinucleotide binding domain LFZ55_RS23280 PF04879 Molybdopterin oxidoreductase Fe4S4 domain LFZ55_RS23285 PF13247 4Fe-4S dicluster domain LFZ55_RS23285 PF09163 Formate dehydrogenase N, transmembrane LFZ55_RS23290 PF01292 Prokaryotic cytochrome b561 LFZ55_RS23295 PF04216 Protein involved in formate dehydrogenase formation LFZ55_RS23310 PF07859 alpha/beta hydrolase fold LFZ55_RS23315 PF09907 HigB_toxin, RelE-like toxic component of a toxin-antitoxin system LFZ55_RS23320 PF01381 Helix-turn-helix LFZ55_RS23325 PF00583 Acetyltransferase (GNAT) family LFZ55_RS23325 PF09500 Putative thioesterase (yiiD_Cterm) LFZ55_RS23330 PF02580 D-Tyr-tRNA(Tyr) deacylase LFZ55_RS23335 PF03631 Virulence factor BrkB LFZ55_RS23340 PF13419 Haloacid dehalogenase-like hydrolase LFZ55_RS23345 PF08220 DeoR-like helix-turn-helix domain LFZ55_RS23345 PF00455 DeoR C terminal sensor domain LFZ55_RS23350 PF00294 pfkB family carbohydrate kinase LFZ55_RS23355 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase LFZ55_RS23355 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase LFZ55_RS23360 PF01791 DeoC/LacD family aldolase LFZ55_RS23370 PF01263 Aldose 1-epimerase LFZ55_RS23380 PF01055 Glycosyl hydrolases family 31 LFZ55_RS23395 PF06178 Oligogalacturonate-specific porin protein (KdgM) LFZ55_RS23400 PF00679 Elongation factor G C-terminus LFZ55_RS23400 PF00009 Elongation factor Tu GTP binding domain LFZ55_RS23400 PF03144 Elongation factor Tu domain 2 LFZ55_RS23410 PF00120 Glutamine synthetase, catalytic domain LFZ55_RS23410 PF03951 Glutamine synthetase, beta-Grasp domain LFZ55_RS23415 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LFZ55_RS23415 PF00989 PAS fold LFZ55_RS23415 PF00512 His Kinase A (phospho-acceptor) domain LFZ55_RS23420 PF02954 Bacterial regulatory protein, Fis family LFZ55_RS23420 PF00072 Response regulator receiver domain LFZ55_RS23420 PF00158 Sigma-54 interaction domain LFZ55_RS23430 PF04055 Radical SAM superfamily LFZ55_RS23430 PF06969 HemN C-terminal domain LFZ55_RS23435 PF04220 Der GTPase activator (YihI) LFZ55_RS23445 PF01926 50S ribosome-binding GTPase LFZ55_RS23450 PF01612 3'-5' exonuclease LFZ55_RS23450 PF00476 DNA polymerase family A LFZ55_RS23450 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain LFZ55_RS23450 PF01367 5'-3' exonuclease, C-terminal SAM fold LFZ55_RS23460 PF01553 Acyltransferase LFZ55_RS23465 PF01323 DSBA-like thioredoxin domain LFZ55_RS23470 PF01636 Phosphotransferase enzyme family LFZ55_RS23475 PF06288 Protein of unknown function (DUF1040) LFZ55_RS23480 PF12804 MobA-like NTP transferase domain LFZ55_RS23485 PF03205 Molybdopterin guanine dinucleotide synthesis protein B LFZ55_RS23515 PF12724 Flavodoxin domain LFZ55_RS23520 PF02386 Cation transport protein LFZ55_RS23525 PF01205 Uncharacterized protein family UPF0029 LFZ55_RS23525 PF09186 Domain of unknown function (DUF1949) LFZ55_RS23530 PF00557 Metallopeptidase family M24 LFZ55_RS23535 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain LFZ55_RS23535 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain LFZ55_RS23535 PF00378 Enoyl-CoA hydratase/isomerase LFZ55_RS23540 PF00108 Thiolase, N-terminal domain LFZ55_RS23540 PF02803 Thiolase, C-terminal domain LFZ55_RS23545 PF00970 Oxidoreductase FAD-binding domain LFZ55_RS23545 PF00175 Oxidoreductase NAD-binding domain LFZ55_RS23550 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase LFZ55_RS23555 PF02357 Transcription termination factor nusG LFZ55_RS23560 PF01026 TatD related DNase LFZ55_RS23565 PF00902 Sec-independent protein translocase protein (TatC) LFZ55_RS23575 PF02416 mttA/Hcf106 family LFZ55_RS23580 PF03109 ABC1 family LFZ55_RS23585 PF02036 SCP-2 sterol transfer family LFZ55_RS23590 PF01209 ubiE/COQ5 methyltransferase family LFZ55_RS23595 PF02646 RmuC family LFZ55_RS23600 PF01048 Phosphorylase superfamily LFZ55_RS23605 PF01738 Dienelactone hydrolase family LFZ55_RS23610 PF02810 SEC-C motif LFZ55_RS23610 PF07517 SecA DEAD-like domain LFZ55_RS23610 PF01043 SecA preprotein cross-linking domain LFZ55_RS23610 PF07516 SecA Wing and Scaffold domain LFZ55_RS23615 PF01717 Cobalamin-independent synthase, Catalytic domain LFZ55_RS23615 PF08267 Cobalamin-independent synthase, N-terminal domain LFZ55_RS23620 PF03466 LysR substrate binding domain LFZ55_RS23620 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LFZ55_RS23625 PF00892 EamA-like transporter family LFZ55_RS23635 PF12146 Serine aminopeptidase, S33 LFZ55_RS23640 PF01810 LysE type translocator LFZ55_RS23645 PF01810 LysE type translocator LFZ55_RS23650 PF09382 RQC domain LFZ55_RS23650 PF00271 Helicase conserved C-terminal domain LFZ55_RS23650 PF00270 DEAD/DEAH box helicase LFZ55_RS23650 PF00570 HRDC domain LFZ55_RS23650 PF16124 RecQ zinc-binding LFZ55_RS23655 PF02253 Phospholipase A1 LFZ55_RS23660 PF03061 Thioesterase superfamily LFZ55_RS23665 PF00892 EamA-like transporter family LFZ55_RS23680 PF01544 CorA-like Mg2+ transporter protein LFZ55_RS23685 PF13361 UvrD-like helicase C-terminal domain LFZ55_RS23685 PF00580 UvrD/REP helicase N-terminal domain LFZ55_RS23690 PF13419 Haloacid dehalogenase-like hydrolase LFZ55_RS23695 PF02899 Phage integrase, N-terminal SAM-like domain LFZ55_RS23695 PF00589 Phage integrase family LFZ55_RS23700 PF04340 Protein of unknown function, DUF484 LFZ55_RS23705 PF01678 Diaminopimelate epimerase LFZ55_RS23710 PF13627 Prokaryotic lipoprotein-attachment site LFZ55_RS23715 PF01491 Frataxin-like domain LFZ55_RS23720 PF12633 Adenylate cyclase NT domain LFZ55_RS23720 PF01295 Adenylate cyclase, class-I LFZ55_RS23730 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain LFZ55_RS23730 PF03900 Porphobilinogen deaminase, C-terminal domain LFZ55_RS23735 PF02602 Uroporphyrinogen-III synthase HemD LFZ55_RS23740 PF04375 HemX, putative uroporphyrinogen-III C-methyltransferase LFZ55_RS23745 PF07719 Tetratricopeptide repeat LFZ55_RS23745 PF07219 HemY protein N-terminus LFZ55_RS23770 PF00324 Amino acid permease LFZ55_RS23775 PF03808 Glycosyl transferase WecB/TagA/CpsF family LFZ55_RS23780 PF06899 WzyE protein, O-antigen assembly polymerase LFZ55_RS23785 PF07429 4-alpha-L-fucosyltransferase glycosyl transferase group 56 LFZ55_RS23790 PF01943 Polysaccharide biosynthesis protein LFZ55_RS23795 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family LFZ55_RS23805 PF00483 Nucleotidyl transferase LFZ55_RS23810 PF16363 GDP-mannose 4,6 dehydratase LFZ55_RS23815 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain LFZ55_RS23815 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain LFZ55_RS23815 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain LFZ55_RS23820 PF02350 UDP-N-acetylglucosamine 2-epimerase LFZ55_RS23825 PF02706 Chain length determinant protein LFZ55_RS23830 PF00953 Glycosyl transferase family 4 LFZ55_RS23840 PF07497 Rho termination factor, RNA-binding domain LFZ55_RS23840 PF07498 Rho termination factor, N-terminal domain LFZ55_RS23840 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain LFZ55_RS23845 PF00085 Thioredoxin LFZ55_RS23850 PF00271 Helicase conserved C-terminal domain LFZ55_RS23850 PF00270 DEAD/DEAH box helicase LFZ55_RS23860 PF02541 Ppx/GppA phosphatase family LFZ55_RS23865 PF00580 UvrD/REP helicase N-terminal domain LFZ55_RS23865 PF13361 UvrD-like helicase C-terminal domain LFZ55_RS23870 PF04973 Nicotinamide mononucleotide transporter LFZ55_RS23875 PF01048 Phosphorylase superfamily LFZ55_RS23890 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain LFZ55_RS23890 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain LFZ55_RS23895 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LFZ55_RS23895 PF03466 LysR substrate binding domain LFZ55_RS23900 PF00585 C-terminal regulatory domain of Threonine dehydratase LFZ55_RS23900 PF00291 Pyridoxal-phosphate dependent enzyme LFZ55_RS23905 PF00920 Dehydratase family LFZ55_RS23910 PF01063 Amino-transferase class IV LFZ55_RS23920 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain LFZ55_RS23920 PF00205 Thiamine pyrophosphate enzyme, central domain LFZ55_RS23920 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain LFZ55_RS23925 PF08046 IlvGEDA operon leader peptide LFZ55_RS23930 PF13335 Magnesium chelatase, subunit ChlI C-terminal LFZ55_RS23930 PF01078 Magnesium chelatase, subunit ChlI LFZ55_RS23935 PF04219 Protein of unknown function, DUF LFZ55_RS23940 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LFZ55_RS23940 PF03466 LysR substrate binding domain LFZ55_RS23975 PF00392 Bacterial regulatory proteins, gntR family LFZ55_RS23975 PF07729 FCD domain LFZ55_RS23980 PF07690 Major Facilitator Superfamily LFZ55_RS23985 PF00356 Bacterial regulatory proteins, lacI family LFZ55_RS23990 PF00294 pfkB family carbohydrate kinase LFZ55_RS23995 PF13407 Periplasmic binding protein domain LFZ55_RS24000 PF02653 Branched-chain amino acid transport system / permease component LFZ55_RS24005 PF00005 ABC transporter LFZ55_RS24010 PF05025 RbsD / FucU transport protein family LFZ55_RS24015 PF02705 K+ potassium transporter LFZ55_RS24020 PF12592 Protein of unknown function (DUF3763) LFZ55_RS24020 PF17868 AAA lid domain LFZ55_RS24020 PF07728 AAA domain (dynein-related subfamily) LFZ55_RS24025 PF05762 VWA domain containing CoxE-like protein LFZ55_RS24030 PF03590 Aspartate-ammonia ligase LFZ55_RS24035 PF01037 Lrp/AsnC ligand binding domain LFZ55_RS24040 PF00258 Flavodoxin LFZ55_RS24045 PF13932 GidA associated domain LFZ55_RS24045 PF01134 Glucose inhibited division protein A LFZ55_RS24050 PF02527 rRNA small subunit methyltransferase G LFZ55_RS24055 PF03899 ATP synthase I chain LFZ55_RS24060 PF00119 ATP synthase A chain LFZ55_RS24065 PF00137 ATP synthase subunit C LFZ55_RS24070 PF00430 ATP synthase B/B' CF(0) LFZ55_RS24075 PF00213 ATP synthase delta (OSCP) subunit LFZ55_RS24080 PF02874 ATP synthase alpha/beta family, beta-barrel domain LFZ55_RS24080 PF00306 ATP synthase alpha/beta chain, C terminal domain LFZ55_RS24080 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain LFZ55_RS24085 PF00231 ATP synthase LFZ55_RS24090 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain LFZ55_RS24090 PF02874 ATP synthase alpha/beta family, beta-barrel domain LFZ55_RS24095 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain LFZ55_RS24095 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain LFZ55_RS24100 PF00132 Bacterial transferase hexapeptide (six repeats) LFZ55_RS24100 PF14602 Hexapeptide repeat of succinyl-transferase LFZ55_RS24100 PF12804 MobA-like NTP transferase domain LFZ55_RS24105 PF01380 SIS domain LFZ55_RS24110 PF12849 PBP superfamily domain LFZ55_RS24115 PF00528 Binding-protein-dependent transport system inner membrane component LFZ55_RS24120 PF00528 Binding-protein-dependent transport system inner membrane component LFZ55_RS24125 PF00005 ABC transporter LFZ55_RS24130 PF01895 PhoU domain LFZ55_RS24135 PF13419 Haloacid dehalogenase-like hydrolase LFZ55_RS24140 PF00860 Permease family LFZ55_RS24145 PF03358 NADPH-dependent FMN reductase LFZ55_RS24155 PF03466 LysR substrate binding domain LFZ55_RS24155 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LFZ55_RS24160 PF07690 Major Facilitator Superfamily LFZ55_RS24165 PF10396 GTP-binding protein TrmE N-terminus LFZ55_RS24165 PF01926 50S ribosome-binding GTPase LFZ55_RS24165 PF12631 MnmE helical domain LFZ55_RS24175 PF02096 60Kd inner membrane protein LFZ55_RS24175 PF14849 YidC periplasmic domain LFZ55_RS24180 PF01809 Putative membrane protein insertion efficiency factor LFZ55_RS24185 PF00825 Ribonuclease P LFZ55_RS24190 PF00468 Ribosomal protein L34 LFZ55_RS24205 PF02195 ParB-like nuclease domain LFZ55_RS24205 PF08535 KorB domain LFZ55_RS24205 PF06613 KorB C-terminal beta-barrel domain LFZ55_RS24210 PF13614 AAA domain LFZ55_RS24220 PF01131 DNA topoisomerase LFZ55_RS24220 PF01751 Toprim domain LFZ55_RS24235 PF01807 CHC2 zinc finger LFZ55_RS24235 PF13662 Toprim domain LFZ55_RS24235 PF08275 DNA primase catalytic core, N-terminal domain LFZ55_RS24275 PF00437 Type II/IV secretion system protein LFZ55_RS24290 PF02195 ParB-like nuclease domain LFZ55_RS24300 PF00717 Peptidase S24-like LFZ55_RS24305 PF11799 impB/mucB/samB family C-terminal domain LFZ55_RS24305 PF00817 impB/mucB/samB family LFZ55_RS24305 PF13438 Domain of unknown function (DUF4113) LFZ55_RS24360 PF09190 DALR domain LFZ55_RS24360 PF01406 tRNA synthetases class I (C) catalytic domain LFZ55_RS24450 PF06296 RelE toxin of RelE / RelB toxin-antitoxin system LFZ55_RS24455 PF00589 Phage integrase family LFZ55_RS24570 PF00437 Type II/IV secretion system protein LFZ55_RS24590 PF04917 Bacterial shufflon protein, N-terminal constant region LFZ55_RS24620 PF04754 Putative transposase, YhgA-like LFZ55_RS24625 PF00589 Phage integrase family LFZ55_RS24635 PF01845 CcdB protein LFZ55_RS24640 PF07362 Post-segregation antitoxin CcdA LFZ55_RS24645 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin LFZ55_RS24650 PF01850 PIN domain LFZ55_RS24665 PF06977 SdiA-regulated LFZ55_RS24670 PF01323 DSBA-like thioredoxin domain LFZ55_RS24675 PF00196 Bacterial regulatory proteins, luxR family LFZ55_RS24675 PF00563 EAL domain LFZ55_RS24690 PF00577 Outer membrane usher protein LFZ55_RS24690 PF13954 PapC N-terminal domain LFZ55_RS24690 PF13953 PapC C-terminal domain LFZ55_RS24695 PF02753 Pili assembly chaperone PapD, C-terminal domain LFZ55_RS24695 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain LFZ55_RS24725 PF01797 Transposase IS200 like LFZ55_RS24755 PF02387 IncFII RepA protein family LFZ55_RS24770 PF10723 Replication regulatory protein RepB LFZ55_RS24790 PF04352 ProQ/FINO family LFZ55_RS24790 PF12602 Fertility inhibition protein N terminal LFZ55_RS24795 PF05857 TraX protein LFZ55_RS24800 PF18340 DNA relaxase TraI 2B/2B-like domain LFZ55_RS24800 PF08751 TrwC relaxase LFZ55_RS24800 PF18272 single-stranded DNA binding TraI N-terminal subdomain LFZ55_RS24800 PF07057 DNA helicase TraI LFZ55_RS24805 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin LFZ55_RS24810 PF01850 PIN domain LFZ55_RS24815 PF12615 F sex factor protein N terminal LFZ55_RS24815 PF10412 Type IV secretion-system coupling protein DNA-binding domain LFZ55_RS24820 PF05818 Enterobacterial TraT complement resistance protein LFZ55_RS24830 PF07916 TraG-like protein, N-terminal region LFZ55_RS24835 PF06122 Conjugative relaxosome accessory transposon protein LFZ55_RS24840 PF13728 F plasmid transfer operon protein LFZ55_RS24845 PF09679 Type-F conjugative transfer system pilin chaperone (TraQ) LFZ55_RS24850 PF13728 F plasmid transfer operon protein LFZ55_RS24855 PF11100 Conjugal transfer protein TrbE LFZ55_RS24865 PF06986 Type-1V conjugative transfer system mating pair stabilisation LFZ55_RS24875 PF09673 Type-F conjugative transfer system pilin assembly protein LFZ55_RS24885 PF06834 TraU protein LFZ55_RS24890 PF12477 Sex factor F TraW protein N terminal LFZ55_RS24895 PF09677 Type-F conjugative transfer system protein (TrbI_Ftype) LFZ55_RS24900 PF11130 F pilus assembly Type-IV secretion system for plasmid transfer LFZ55_RS24915 PF01258 Prokaryotic dksA/traR C4-type zinc finger LFZ55_RS24920 PF09676 Type IV conjugative transfer system lipoprotein (TraV) LFZ55_RS24930 PF07296 TraP protein LFZ55_RS24935 PF03743 Bacterial conjugation TrbI-like protein LFZ55_RS24940 PF06586 TraK protein LFZ55_RS24945 PF05309 TraE protein LFZ55_RS24950 PF07178 TraL protein LFZ55_RS24955 PF05513 TraA LFZ55_RS24960 PF05509 TraY domain LFZ55_RS24970 PF05261 TraM protein, DNA-binding LFZ55_RS24975 PF01464 Transglycosylase SLT domain LFZ55_RS24990 PF07128 Protein of unknown function (DUF1380) LFZ55_RS24995 PF01555 DNA methylase LFZ55_RS25000 PF01051 Initiator Replication protein LFZ55_RS25005 PF00717 Peptidase S24-like LFZ55_RS25015 PF13614 AAA domain